Query 003158
Match_columns 843
No_of_seqs 725 out of 6095
Neff 9.0
Searched_HMMs 46136
Date Thu Mar 28 18:08:27 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/003158.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/003158hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00113 leucine-rich repeat r 100.0 4E-68 8.7E-73 663.0 53.0 647 2-789 293-955 (968)
2 KOG1187 Serine/threonine prote 100.0 4.3E-50 9.4E-55 436.3 28.4 284 497-786 61-353 (361)
3 KOG0615 Serine/threonine prote 100.0 9.4E-49 2E-53 401.7 12.0 264 509-830 170-447 (475)
4 KOG0581 Mitogen-activated prot 100.0 2.7E-47 5.8E-52 389.5 19.3 247 513-779 81-333 (364)
5 KOG0659 Cdk activating kinase 100.0 9.7E-48 2.1E-52 373.2 13.9 283 511-828 2-289 (318)
6 KOG0192 Tyrosine kinase specif 100.0 2.4E-46 5.2E-51 403.5 25.5 261 513-791 43-309 (362)
7 KOG0575 Polo-like serine/threo 100.0 6.4E-47 1.4E-51 408.1 18.9 253 511-825 18-274 (592)
8 KOG0197 Tyrosine kinases [Sign 100.0 5.5E-47 1.2E-51 405.4 16.1 265 503-787 198-463 (468)
9 KOG0598 Ribosomal protein S6 k 100.0 1E-46 2.2E-51 385.2 14.3 272 509-842 23-303 (357)
10 KOG0661 MAPK related serine/th 100.0 6.2E-47 1.3E-51 394.9 12.1 287 509-828 8-299 (538)
11 KOG0595 Serine/threonine-prote 100.0 2.8E-45 6.2E-50 377.2 19.8 271 510-821 9-288 (429)
12 KOG0593 Predicted protein kina 100.0 1.5E-46 3.3E-51 370.4 9.3 280 511-825 2-289 (396)
13 KOG0600 Cdc2-related protein k 100.0 1.4E-45 3.1E-50 387.5 14.1 287 510-828 116-408 (560)
14 KOG0591 NIMA (never in mitosis 100.0 1.5E-45 3.2E-50 359.9 12.6 257 511-784 19-284 (375)
15 KOG0663 Protein kinase PITSLRE 100.0 3.3E-45 7.1E-50 365.8 13.1 286 511-828 76-369 (419)
16 KOG0616 cAMP-dependent protein 100.0 1.7E-44 3.6E-49 355.7 16.5 267 511-842 44-319 (355)
17 KOG0660 Mitogen-activated prot 100.0 8.1E-45 1.8E-49 369.7 14.1 286 509-825 20-315 (359)
18 KOG1026 Nerve growth factor re 100.0 1.6E-44 3.5E-49 404.4 17.4 264 509-790 484-767 (774)
19 KOG0592 3-phosphoinositide-dep 100.0 8.2E-44 1.8E-48 377.2 17.4 270 510-834 72-352 (604)
20 KOG0582 Ste20-like serine/thre 100.0 1.6E-42 3.6E-47 359.1 19.9 209 509-723 24-236 (516)
21 KOG0578 p21-activated serine/t 100.0 3.1E-43 6.7E-48 376.7 14.5 258 511-828 273-531 (550)
22 KOG0605 NDR and related serine 100.0 1.2E-42 2.7E-47 369.0 18.0 280 509-842 139-465 (550)
23 KOG0196 Tyrosine kinase, EPH ( 100.0 2.8E-43 6E-48 385.4 11.8 271 499-787 608-893 (996)
24 KOG0667 Dual-specificity tyros 100.0 3.8E-43 8.3E-48 383.5 12.9 291 512-828 187-510 (586)
25 KOG0594 Protein kinase PCTAIRE 100.0 1.2E-42 2.5E-47 355.9 15.0 294 510-834 10-316 (323)
26 KOG0597 Serine-threonine prote 100.0 1.1E-42 2.3E-47 368.0 13.8 256 511-829 2-260 (808)
27 KOG0193 Serine/threonine prote 100.0 3.5E-42 7.5E-47 369.1 16.6 267 502-790 383-658 (678)
28 cd05631 STKc_GRK4 Catalytic do 100.0 1E-41 2.3E-46 365.2 20.0 274 512-842 1-283 (285)
29 KOG0033 Ca2+/calmodulin-depend 100.0 5.7E-44 1.2E-48 341.8 2.1 259 509-826 9-273 (355)
30 KOG0583 Serine/threonine prote 100.0 1.1E-41 2.3E-46 371.3 19.9 255 508-825 14-280 (370)
31 KOG0610 Putative serine/threon 100.0 1.9E-41 4.1E-46 348.8 17.4 281 510-843 76-413 (459)
32 KOG0198 MEKK and related serin 100.0 2.4E-41 5.2E-46 353.3 18.1 203 511-721 17-224 (313)
33 PHA03212 serine/threonine kina 100.0 4.9E-41 1.1E-45 374.5 20.5 282 510-826 91-382 (391)
34 KOG0658 Glycogen synthase kina 100.0 3.6E-42 7.8E-47 351.0 9.5 275 512-825 25-311 (364)
35 cd07871 STKc_PCTAIRE3 Catalyti 100.0 5.1E-41 1.1E-45 360.5 18.4 281 511-823 5-288 (288)
36 KOG0694 Serine/threonine prote 100.0 2.9E-41 6.3E-46 368.2 16.6 275 506-843 363-647 (694)
37 cd05612 STKc_PRKX_like Catalyt 100.0 4E-41 8.6E-46 361.8 16.1 254 511-829 1-263 (291)
38 KOG0588 Serine/threonine prote 100.0 1.8E-41 3.9E-46 366.3 13.0 255 512-829 13-272 (786)
39 cd05102 PTKc_VEGFR3 Catalytic 100.0 2.8E-40 6E-45 363.3 22.6 264 507-787 3-336 (338)
40 PTZ00426 cAMP-dependent protei 100.0 7.7E-41 1.7E-45 366.7 18.1 199 510-723 29-232 (340)
41 KOG0580 Serine/threonine prote 100.0 1.3E-41 2.9E-46 325.9 10.4 255 510-826 21-279 (281)
42 KOG1094 Discoidin domain recep 100.0 3.8E-40 8.3E-45 349.9 22.4 262 509-785 536-804 (807)
43 KOG4721 Serine/threonine prote 100.0 1.7E-41 3.6E-46 358.4 11.8 241 514-785 127-368 (904)
44 KOG1095 Protein tyrosine kinas 100.0 7.5E-41 1.6E-45 388.5 18.2 261 511-789 692-965 (1025)
45 PTZ00263 protein kinase A cata 100.0 7.9E-41 1.7E-45 365.8 17.0 198 511-723 18-219 (329)
46 KOG0585 Ca2+/calmodulin-depend 100.0 1.3E-40 2.9E-45 346.8 17.1 266 508-829 94-381 (576)
47 cd05571 STKc_PKB Catalytic dom 100.0 9.5E-41 2.1E-45 364.3 16.1 195 517-723 1-199 (323)
48 cd07862 STKc_CDK6 Catalytic do 100.0 2.8E-40 6.2E-45 355.1 19.3 278 511-823 1-290 (290)
49 cd07848 STKc_CDKL5 Catalytic d 100.0 2.9E-40 6.4E-45 354.4 18.5 284 511-823 1-287 (287)
50 KOG0666 Cyclin C-dependent kin 100.0 4.7E-41 1E-45 332.2 11.2 290 509-828 22-345 (438)
51 cd07869 STKc_PFTAIRE1 Catalyti 100.0 3.5E-40 7.5E-45 356.8 19.1 289 510-827 4-295 (303)
52 cd05585 STKc_YPK1_like Catalyt 100.0 3.2E-40 6.9E-45 358.4 18.5 192 519-722 1-196 (312)
53 KOG0194 Protein tyrosine kinas 100.0 2E-40 4.2E-45 361.3 16.3 270 501-791 147-426 (474)
54 cd06650 PKc_MEK1 Catalytic dom 100.0 5.3E-40 1.2E-44 359.7 18.8 296 509-828 3-307 (333)
55 cd05605 STKc_GRK4_like Catalyt 100.0 1.2E-39 2.5E-44 349.3 20.1 274 512-842 1-283 (285)
56 cd06649 PKc_MEK2 Catalytic dom 100.0 7.4E-40 1.6E-44 358.5 18.7 298 510-828 4-309 (331)
57 KOG0599 Phosphorylase kinase g 100.0 2.8E-41 6E-46 328.0 6.3 257 510-825 16-288 (411)
58 cd05608 STKc_GRK1 Catalytic do 100.0 1.7E-39 3.7E-44 347.1 20.7 195 519-723 1-201 (280)
59 KOG0201 Serine/threonine prote 100.0 1.5E-40 3.3E-45 344.8 11.7 250 510-781 12-263 (467)
60 cd05595 STKc_PKB_beta Catalyti 100.0 9.8E-40 2.1E-44 356.2 18.8 234 517-773 1-238 (323)
61 cd05593 STKc_PKB_gamma Catalyt 100.0 1E-39 2.2E-44 356.8 18.4 234 517-773 1-238 (328)
62 PTZ00284 protein kinase; Provi 100.0 1.3E-39 2.7E-44 373.2 18.7 296 505-828 123-446 (467)
63 cd07853 STKc_NLK Catalytic dom 100.0 2.8E-39 6E-44 360.0 20.9 285 512-826 1-294 (372)
64 cd05590 STKc_nPKC_eta Catalyti 100.0 1.2E-39 2.5E-44 355.1 17.4 195 517-723 1-200 (320)
65 PHA02988 hypothetical protein; 100.0 1.1E-38 2.4E-43 341.1 23.6 261 497-787 11-281 (283)
66 cd05618 STKc_aPKC_iota Catalyt 100.0 1.8E-39 3.9E-44 354.9 17.7 192 517-720 1-197 (329)
67 cd07859 STKc_TDY_MAPK_plant Ca 100.0 2.6E-39 5.6E-44 355.7 18.9 283 512-828 1-298 (338)
68 KOG0032 Ca2+/calmodulin-depend 100.0 2.1E-39 4.6E-44 352.7 18.0 261 509-829 33-302 (382)
69 cd05614 STKc_MSK2_N N-terminal 100.0 2E-39 4.3E-44 355.6 17.9 199 512-721 1-209 (332)
70 cd05584 STKc_p70S6K Catalytic 100.0 1.9E-39 4.1E-44 354.1 17.5 195 517-723 2-204 (323)
71 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 1.2E-39 2.7E-44 357.3 15.8 198 511-723 1-202 (333)
72 cd05594 STKc_PKB_alpha Catalyt 100.0 1.5E-39 3.2E-44 355.4 15.6 195 517-723 1-200 (325)
73 cd07868 STKc_CDK8 Catalytic do 100.0 4.2E-39 9.1E-44 350.7 19.0 281 516-823 6-317 (317)
74 KOG0589 Serine/threonine prote 100.0 2.8E-39 6E-44 345.5 16.8 251 511-781 4-258 (426)
75 cd05596 STKc_ROCK Catalytic do 100.0 1.8E-39 3.9E-44 360.4 15.8 262 509-829 41-313 (370)
76 cd07872 STKc_PCTAIRE2 Catalyti 100.0 6.9E-39 1.5E-43 347.7 19.7 288 511-830 6-296 (309)
77 cd05621 STKc_ROCK2 Catalytic d 100.0 7.7E-39 1.7E-43 354.9 20.2 204 508-723 40-251 (370)
78 cd05589 STKc_PKN Catalytic dom 100.0 2.9E-39 6.3E-44 352.8 16.5 239 513-775 1-246 (324)
79 cd05588 STKc_aPKC Catalytic do 100.0 4.4E-39 9.5E-44 352.0 17.9 193 517-721 1-198 (329)
80 cd05064 PTKc_EphR_A10 Catalyti 100.0 2.2E-38 4.7E-43 336.0 21.8 256 510-785 4-265 (266)
81 PHA03211 serine/threonine kina 100.0 8.3E-39 1.8E-43 360.7 19.8 286 509-825 167-460 (461)
82 cd05587 STKc_cPKC Catalytic do 100.0 6.5E-39 1.4E-43 350.1 18.2 200 512-723 1-205 (324)
83 KOG2345 Serine/threonine prote 100.0 1.6E-39 3.4E-44 312.9 11.6 268 509-785 19-300 (302)
84 cd05096 PTKc_DDR1 Catalytic do 100.0 3.9E-38 8.4E-43 341.0 23.7 261 510-783 4-303 (304)
85 KOG4278 Protein tyrosine kinas 100.0 1.7E-39 3.7E-44 345.6 12.7 264 503-787 259-525 (1157)
86 cd05599 STKc_NDR_like Catalyti 100.0 3.8E-39 8.3E-44 358.0 16.0 208 511-723 1-243 (364)
87 cd05626 STKc_LATS2 Catalytic d 100.0 7.6E-39 1.6E-43 357.4 18.4 207 512-723 2-252 (381)
88 cd05575 STKc_SGK Catalytic dom 100.0 1.1E-38 2.4E-43 348.1 19.3 194 517-722 1-199 (323)
89 PF07714 Pkinase_Tyr: Protein 100.0 9E-39 2E-43 337.4 17.9 250 515-782 3-259 (259)
90 cd05573 STKc_ROCK_NDR_like Cat 100.0 3E-39 6.5E-44 357.0 14.9 208 511-723 1-234 (350)
91 KOG0662 Cyclin-dependent kinas 100.0 1.9E-39 4.2E-44 296.6 10.9 284 512-827 3-290 (292)
92 cd05628 STKc_NDR1 Catalytic do 100.0 2.6E-38 5.7E-43 350.8 21.8 208 511-723 1-240 (363)
93 cd05607 STKc_GRK7 Catalytic do 100.0 3.8E-38 8.1E-43 336.2 22.0 193 519-722 1-197 (277)
94 cd05619 STKc_nPKC_theta Cataly 100.0 1.9E-38 4.1E-43 344.8 20.0 279 517-827 1-285 (316)
95 cd07876 STKc_JNK2 Catalytic do 100.0 2E-38 4.4E-43 351.3 20.6 290 509-825 19-320 (359)
96 KOG4257 Focal adhesion tyrosin 100.0 2.1E-38 4.5E-43 338.3 19.6 262 505-787 383-651 (974)
97 KOG0611 Predicted serine/threo 100.0 1.6E-39 3.5E-44 330.9 10.6 201 510-723 52-257 (668)
98 cd05072 PTKc_Lyn Catalytic dom 100.0 3.1E-38 6.8E-43 333.7 21.0 256 509-784 4-260 (261)
99 cd05625 STKc_LATS1 Catalytic d 100.0 6.3E-39 1.4E-43 358.4 16.5 207 512-723 2-252 (382)
100 cd05048 PTKc_Ror Catalytic Dom 100.0 5.5E-38 1.2E-42 336.0 23.0 256 511-784 5-282 (283)
101 cd05104 PTKc_Kit Catalytic dom 100.0 3.6E-38 7.8E-43 350.6 22.3 261 507-784 31-373 (375)
102 PLN00034 mitogen-activated pro 100.0 1.3E-38 2.8E-43 352.0 18.5 255 512-829 75-337 (353)
103 cd05106 PTKc_CSF-1R Catalytic 100.0 3.2E-38 6.9E-43 350.7 21.7 264 506-786 33-373 (374)
104 cd05591 STKc_nPKC_epsilon Cata 100.0 7.4E-39 1.6E-43 349.2 16.1 195 517-723 1-200 (321)
105 cd05592 STKc_nPKC_theta_delta 100.0 2E-38 4.3E-43 344.8 19.4 237 517-776 1-242 (316)
106 cd05620 STKc_nPKC_delta Cataly 100.0 1.5E-38 3.3E-43 345.7 18.3 194 517-722 1-199 (316)
107 PTZ00036 glycogen synthase kin 100.0 9.1E-39 2E-43 361.9 17.0 281 510-828 65-359 (440)
108 cd05114 PTKc_Tec_Rlk Catalytic 100.0 6.5E-38 1.4E-42 330.3 22.3 251 511-782 4-255 (256)
109 cd05617 STKc_aPKC_zeta Catalyt 100.0 1.6E-38 3.6E-43 347.2 18.3 193 517-721 1-198 (327)
110 cd05148 PTKc_Srm_Brk Catalytic 100.0 3.3E-38 7.2E-43 333.5 19.9 256 509-784 4-260 (261)
111 cd05629 STKc_NDR_like_fungal C 100.0 2.1E-38 4.6E-43 353.6 19.4 208 511-723 1-252 (377)
112 cd05616 STKc_cPKC_beta Catalyt 100.0 2E-38 4.4E-43 346.1 18.5 241 512-775 1-246 (323)
113 PHA03209 serine/threonine kina 100.0 6.6E-38 1.4E-42 346.5 22.7 289 508-825 63-356 (357)
114 cd07875 STKc_JNK1 Catalytic do 100.0 4.3E-38 9.4E-43 349.4 21.2 290 509-825 22-323 (364)
115 cd05052 PTKc_Abl Catalytic dom 100.0 7.1E-38 1.5E-42 331.5 21.8 255 511-785 6-262 (263)
116 cd05604 STKc_SGK3 Catalytic do 100.0 1.1E-38 2.4E-43 348.4 15.8 195 517-723 1-200 (325)
117 KOG3653 Transforming growth fa 100.0 4.3E-37 9.4E-42 321.1 26.7 268 511-790 210-508 (534)
118 cd05598 STKc_LATS Catalytic do 100.0 6.5E-39 1.4E-43 357.6 14.1 208 511-723 1-248 (376)
119 cd05615 STKc_cPKC_alpha Cataly 100.0 2.2E-38 4.7E-43 345.6 17.8 241 512-775 1-246 (323)
120 cd05601 STKc_CRIK Catalytic do 100.0 1.1E-38 2.4E-43 349.4 15.5 203 511-723 1-213 (330)
121 cd05622 STKc_ROCK1 Catalytic d 100.0 4E-38 8.6E-43 349.6 20.2 209 503-723 35-251 (371)
122 KOG1989 ARK protein kinase fam 100.0 1.9E-38 4.1E-43 357.7 17.8 265 509-788 35-314 (738)
123 PHA03207 serine/threonine kina 100.0 2.6E-38 5.6E-43 354.2 18.8 288 510-828 91-383 (392)
124 cd05570 STKc_PKC Catalytic dom 100.0 2.3E-38 5E-43 344.7 17.8 195 517-723 1-200 (318)
125 cd05582 STKc_RSK_N N-terminal 100.0 7.4E-39 1.6E-43 348.7 13.8 238 517-777 2-245 (318)
126 cd07863 STKc_CDK4 Catalytic do 100.0 2.1E-38 4.5E-43 340.2 17.0 277 512-823 1-288 (288)
127 cd05068 PTKc_Frk_like Catalyti 100.0 9.1E-38 2E-42 330.2 21.3 256 509-784 4-260 (261)
128 cd05632 STKc_GRK5 Catalytic do 100.0 6.5E-38 1.4E-42 335.8 20.4 200 513-723 2-205 (285)
129 cd05049 PTKc_Trk Catalytic dom 100.0 1.2E-37 2.6E-42 332.8 22.3 256 510-783 4-279 (280)
130 cd05093 PTKc_TrkB Catalytic do 100.0 2E-37 4.4E-42 332.6 23.5 261 510-788 4-282 (288)
131 PTZ00267 NIMA-related protein 100.0 1.1E-37 2.4E-42 357.1 22.7 251 512-780 68-322 (478)
132 cd05094 PTKc_TrkC Catalytic do 100.0 2.3E-37 5E-42 332.7 23.5 260 511-788 5-285 (291)
133 cd05630 STKc_GRK6 Catalytic do 100.0 8.8E-38 1.9E-42 334.8 19.8 258 512-826 1-267 (285)
134 cd05071 PTKc_Src Catalytic dom 100.0 2.9E-37 6.2E-42 326.6 23.2 256 510-786 5-261 (262)
135 cd05105 PTKc_PDGFR_alpha Catal 100.0 1.5E-37 3.3E-42 346.6 22.1 263 507-786 33-398 (400)
136 cd07874 STKc_JNK3 Catalytic do 100.0 7.1E-38 1.5E-42 346.5 19.2 291 508-825 14-316 (355)
137 KOG1025 Epidermal growth facto 100.0 5.1E-38 1.1E-42 344.9 17.7 255 513-787 698-959 (1177)
138 cd07878 STKc_p38beta_MAPK11 Ca 100.0 5.6E-38 1.2E-42 345.7 18.2 281 508-825 12-303 (343)
139 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 2E-37 4.3E-42 327.4 21.5 254 510-784 5-259 (260)
140 KOG0607 MAP kinase-interacting 100.0 2.9E-38 6.4E-43 313.4 14.0 284 501-829 73-370 (463)
141 cd05062 PTKc_IGF-1R Catalytic 100.0 1.6E-37 3.5E-42 331.4 20.8 258 508-783 3-276 (277)
142 cd05627 STKc_NDR2 Catalytic do 100.0 2.5E-38 5.4E-43 350.7 15.0 208 511-723 1-240 (360)
143 cd05113 PTKc_Btk_Bmx Catalytic 100.0 2.2E-37 4.8E-42 326.3 21.4 252 511-783 4-256 (256)
144 cd05090 PTKc_Ror1 Catalytic do 100.0 3.3E-37 7.1E-42 330.1 22.5 257 511-785 5-283 (283)
145 cd07867 STKc_CDC2L6 Catalytic 100.0 5.1E-38 1.1E-42 342.2 16.3 196 517-722 7-219 (317)
146 cd05054 PTKc_VEGFR Catalytic d 100.0 3.1E-37 6.7E-42 338.1 22.5 263 508-787 4-335 (337)
147 KOG0986 G protein-coupled rece 100.0 1.9E-38 4.2E-43 328.4 12.0 277 509-842 183-468 (591)
148 cd05033 PTKc_EphR Catalytic do 100.0 5.4E-37 1.2E-41 325.3 23.5 257 510-785 3-265 (266)
149 cd05597 STKc_DMPK_like Catalyt 100.0 9.2E-38 2E-42 341.9 18.2 202 511-722 1-211 (331)
150 cd05602 STKc_SGK1 Catalytic do 100.0 7.4E-38 1.6E-42 341.9 17.4 240 517-779 1-245 (325)
151 KOG2052 Activin A type IB rece 100.0 6E-37 1.3E-41 317.7 23.0 261 510-787 210-505 (513)
152 cd08227 PK_STRAD_alpha Pseudok 100.0 1.4E-37 3E-42 340.1 19.4 206 515-723 2-214 (327)
153 cd07873 STKc_PCTAIRE1 Catalyti 100.0 1.3E-37 2.9E-42 336.3 18.5 283 511-825 6-291 (301)
154 cd05067 PTKc_Lck_Blk Catalytic 100.0 3.8E-37 8.2E-42 325.3 21.3 255 509-784 4-259 (260)
155 cd05603 STKc_SGK2 Catalytic do 100.0 1.2E-37 2.7E-42 339.6 18.1 237 517-776 1-242 (321)
156 cd05061 PTKc_InsR Catalytic do 100.0 5.4E-37 1.2E-41 329.3 22.6 260 508-785 3-278 (288)
157 cd06615 PKc_MEK Catalytic doma 100.0 4.7E-37 1E-41 333.0 22.2 284 511-826 1-293 (308)
158 cd05108 PTKc_EGFR Catalytic do 100.0 5.4E-37 1.2E-41 333.9 22.6 258 510-787 6-270 (316)
159 cd05091 PTKc_Ror2 Catalytic do 100.0 3.5E-37 7.5E-42 329.9 20.6 256 511-784 5-282 (283)
160 cd05059 PTKc_Tec_like Catalyti 100.0 6E-37 1.3E-41 323.0 21.6 251 511-782 4-255 (256)
161 cd05586 STKc_Sck1_like Catalyt 100.0 7.9E-38 1.7E-42 342.5 15.0 234 519-774 1-242 (330)
162 KOG0671 LAMMER dual specificit 100.0 4.8E-39 1E-43 328.1 5.0 292 508-826 86-412 (415)
163 cd05034 PTKc_Src_like Catalyti 100.0 6.4E-37 1.4E-41 323.6 21.4 257 508-784 3-260 (261)
164 cd05069 PTKc_Yes Catalytic dom 100.0 8.5E-37 1.8E-41 322.6 22.3 254 510-784 5-259 (260)
165 cd07839 STKc_CDK5 Catalytic do 100.0 2.4E-37 5.3E-42 331.2 18.1 280 512-823 1-284 (284)
166 PTZ00283 serine/threonine prot 100.0 5.9E-37 1.3E-41 351.2 22.4 255 509-781 30-297 (496)
167 cd05099 PTKc_FGFR4 Catalytic d 100.0 1.1E-36 2.4E-41 331.1 23.1 281 508-809 9-314 (314)
168 cd07832 STKc_CCRK Catalytic do 100.0 2.8E-37 6E-42 331.0 18.0 282 512-824 1-286 (286)
169 cd05092 PTKc_TrkA Catalytic do 100.0 1E-36 2.3E-41 325.7 22.1 255 511-783 5-279 (280)
170 KOG0577 Serine/threonine prote 100.0 4.3E-38 9.4E-43 333.9 11.1 244 512-781 27-278 (948)
171 cd05053 PTKc_FGFR Catalytic do 100.0 6.2E-37 1.4E-41 329.7 20.4 264 505-786 6-292 (293)
172 cd08529 STKc_FA2-like Catalyti 100.0 1.6E-36 3.5E-41 319.5 22.7 249 512-780 1-252 (256)
173 cd07861 STKc_CDK1_euk Catalyti 100.0 6.7E-37 1.4E-41 328.0 20.1 279 512-823 1-285 (285)
174 cd07844 STKc_PCTAIRE_like Cata 100.0 8.2E-37 1.8E-41 328.4 20.7 282 511-823 5-291 (291)
175 cd08228 STKc_Nek6 Catalytic do 100.0 3.1E-36 6.8E-41 319.5 24.9 257 511-785 2-265 (267)
176 KOG0199 ACK and related non-re 100.0 1.3E-37 2.8E-42 336.3 14.3 252 514-783 113-370 (1039)
177 cd05116 PTKc_Syk Catalytic dom 100.0 2E-36 4.4E-41 319.2 23.0 248 518-785 2-255 (257)
178 cd05623 STKc_MRCK_alpha Cataly 100.0 2.5E-37 5.4E-42 338.7 16.7 203 511-723 1-212 (332)
179 cd05089 PTKc_Tie1 Catalytic do 100.0 2E-36 4.3E-41 326.4 23.3 258 511-789 2-279 (297)
180 cd07860 STKc_CDK2_3 Catalytic 100.0 1.1E-36 2.4E-41 326.1 21.0 279 512-823 1-284 (284)
181 cd05111 PTK_HER3 Pseudokinase 100.0 3E-36 6.5E-41 321.9 23.9 257 511-787 7-270 (279)
182 cd05036 PTKc_ALK_LTK Catalytic 100.0 2E-36 4.4E-41 322.9 22.4 257 509-783 4-276 (277)
183 cd05107 PTKc_PDGFR_beta Cataly 100.0 2.8E-36 6.1E-41 336.2 24.4 265 505-786 31-400 (401)
184 cd05039 PTKc_Csk_like Catalyti 100.0 2.8E-36 6.2E-41 317.8 23.1 250 510-784 5-255 (256)
185 cd05115 PTKc_Zap-70 Catalytic 100.0 3E-36 6.6E-41 317.8 23.3 249 518-785 2-255 (257)
186 cd05043 PTK_Ryk Pseudokinase d 100.0 2.1E-36 4.5E-41 323.3 22.4 261 509-787 4-278 (280)
187 cd05032 PTKc_InsR_like Catalyt 100.0 9.6E-37 2.1E-41 325.3 19.7 257 509-783 4-276 (277)
188 cd05101 PTKc_FGFR2 Catalytic d 100.0 2E-36 4.4E-41 327.5 22.5 263 508-788 12-299 (304)
189 KOG0574 STE20-like serine/thre 100.0 1.8E-38 3.8E-43 312.0 5.6 248 511-781 33-283 (502)
190 cd05035 PTKc_Axl_like Catalyti 100.0 3.3E-36 7.2E-41 320.3 23.6 255 513-785 1-272 (273)
191 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 7.4E-36 1.6E-40 316.5 25.9 258 511-786 2-266 (267)
192 cd05098 PTKc_FGFR1 Catalytic d 100.0 2.4E-36 5.1E-41 327.4 22.5 261 510-788 17-302 (307)
193 cd05045 PTKc_RET Catalytic dom 100.0 3.5E-36 7.6E-41 323.3 23.6 258 512-787 1-288 (290)
194 cd05084 PTKc_Fes Catalytic dom 100.0 3E-36 6.5E-41 316.8 22.6 248 517-783 1-251 (252)
195 cd05055 PTKc_PDGFR Catalytic d 100.0 4.4E-36 9.5E-41 324.4 23.9 262 507-785 31-301 (302)
196 cd05073 PTKc_Hck Catalytic dom 100.0 2.5E-36 5.4E-41 319.1 21.5 256 508-784 3-259 (260)
197 cd05624 STKc_MRCK_beta Catalyt 100.0 4E-37 8.7E-42 336.8 16.0 203 511-723 1-212 (331)
198 cd05110 PTKc_HER4 Catalytic do 100.0 3.9E-36 8.5E-41 325.0 23.5 288 510-828 6-300 (303)
199 cd05082 PTKc_Csk Catalytic dom 100.0 2.5E-36 5.5E-41 318.2 21.3 249 510-784 5-255 (256)
200 cd06619 PKc_MKK5 Catalytic dom 100.0 1.1E-36 2.4E-41 325.3 18.8 259 511-829 1-262 (279)
201 cd05085 PTKc_Fer Catalytic dom 100.0 4.8E-36 1E-40 314.8 23.3 247 517-783 1-249 (250)
202 KOG4717 Serine/threonine prote 100.0 1.9E-37 4.2E-42 324.1 12.4 257 511-829 18-279 (864)
203 cd08219 STKc_Nek3 Catalytic do 100.0 2.6E-36 5.6E-41 317.9 21.3 250 512-781 1-252 (255)
204 cd05063 PTKc_EphR_A2 Catalytic 100.0 4.9E-36 1.1E-40 318.2 23.3 258 510-785 4-267 (268)
205 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 3.7E-36 8.1E-41 321.9 22.5 265 512-786 4-282 (283)
206 cd05075 PTKc_Axl Catalytic dom 100.0 5.7E-36 1.2E-40 318.4 23.7 255 513-785 1-271 (272)
207 KOG0690 Serine/threonine prote 100.0 5.3E-38 1.2E-42 311.8 7.2 271 510-842 167-446 (516)
208 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 4.9E-36 1.1E-40 321.2 23.0 267 511-785 4-283 (284)
209 cd05574 STKc_phototropin_like 100.0 3.9E-36 8.5E-41 327.2 22.5 210 511-723 1-236 (316)
210 cd05050 PTKc_Musk Catalytic do 100.0 4.2E-36 9.2E-41 322.4 22.4 257 510-784 4-288 (288)
211 KOG0669 Cyclin T-dependent kin 100.0 5.6E-39 1.2E-43 308.7 -0.0 295 511-829 17-324 (376)
212 cd07870 STKc_PFTAIRE2 Catalyti 100.0 2.4E-36 5.1E-41 324.8 20.2 282 510-823 4-291 (291)
213 cd05103 PTKc_VEGFR2 Catalytic 100.0 4.9E-36 1.1E-40 329.9 23.1 262 509-787 5-341 (343)
214 PRK13184 pknD serine/threonine 100.0 5.5E-36 1.2E-40 351.1 24.8 270 511-791 2-296 (932)
215 cd05580 STKc_PKA Catalytic dom 100.0 2.3E-36 5E-41 324.8 19.8 198 511-723 1-202 (290)
216 cd08229 STKc_Nek7 Catalytic do 100.0 9.3E-36 2E-40 315.9 24.1 257 511-785 2-265 (267)
217 cd06646 STKc_MAP4K5 Catalytic 100.0 4.2E-36 9E-41 318.6 21.3 253 510-780 8-264 (267)
218 KOG0579 Ste20-like serine/thre 100.0 1.7E-37 3.8E-42 330.9 10.5 260 511-828 32-297 (1187)
219 cd05577 STKc_GRK Catalytic dom 100.0 2.4E-36 5.1E-41 322.4 19.4 267 519-842 1-276 (277)
220 cd05088 PTKc_Tie2 Catalytic do 100.0 3.9E-36 8.4E-41 325.0 21.2 257 510-787 6-282 (303)
221 cd06655 STKc_PAK2 Catalytic do 100.0 3.7E-36 8.1E-41 323.9 21.0 266 511-836 19-285 (296)
222 cd05100 PTKc_FGFR3 Catalytic d 100.0 1E-35 2.2E-40 326.4 24.8 266 506-789 7-297 (334)
223 cd05066 PTKc_EphR_A Catalytic 100.0 7.4E-36 1.6E-40 316.7 22.9 258 510-785 3-266 (267)
224 cd07850 STKc_JNK Catalytic dom 100.0 2.5E-36 5.3E-41 333.9 19.9 289 509-824 14-315 (353)
225 cd07842 STKc_CDK8_like Catalyt 100.0 2.3E-36 5E-41 328.9 19.3 284 512-823 1-316 (316)
226 cd07845 STKc_CDK10 Catalytic d 100.0 1.9E-36 4.1E-41 328.6 18.4 287 510-828 6-298 (309)
227 PF00069 Pkinase: Protein kina 100.0 5.7E-37 1.2E-41 323.6 13.9 198 513-722 1-202 (260)
228 cd07841 STKc_CDK7 Catalytic do 100.0 1.4E-36 3.1E-41 327.7 17.2 283 512-828 1-290 (298)
229 PHA03210 serine/threonine kina 100.0 7.7E-37 1.7E-41 351.4 15.9 293 509-829 146-463 (501)
230 cd07847 STKc_CDKL1_4 Catalytic 100.0 1.3E-36 2.9E-41 325.8 16.7 279 511-823 1-286 (286)
231 KOG0584 Serine/threonine prote 100.0 2.3E-37 4.9E-42 334.7 10.6 250 516-826 45-302 (632)
232 cd05056 PTKc_FAK Catalytic dom 100.0 9.3E-36 2E-40 316.5 23.0 257 510-787 5-267 (270)
233 cd05109 PTKc_HER2 Catalytic do 100.0 1.1E-35 2.3E-40 317.7 23.5 258 510-787 6-270 (279)
234 cd06625 STKc_MEKK3_like Cataly 100.0 1.2E-35 2.7E-40 314.1 23.7 204 511-723 2-211 (263)
235 cd07843 STKc_CDC2L1 Catalytic 100.0 2.1E-36 4.6E-41 325.6 18.1 281 511-823 5-293 (293)
236 cd05097 PTKc_DDR_like Catalyti 100.0 8.9E-36 1.9E-40 321.0 22.8 261 510-783 4-294 (295)
237 cd06658 STKc_PAK5 Catalytic do 100.0 3.2E-36 6.9E-41 323.8 19.3 258 513-830 24-282 (292)
238 KOG4279 Serine/threonine prote 100.0 9E-37 2E-41 328.7 14.8 244 518-780 582-831 (1226)
239 cd05051 PTKc_DDR Catalytic dom 100.0 1.2E-35 2.6E-40 320.1 23.6 263 510-783 4-295 (296)
240 cd06654 STKc_PAK1 Catalytic do 100.0 1.2E-35 2.5E-40 320.1 23.2 200 511-723 20-220 (296)
241 cd05065 PTKc_EphR_B Catalytic 100.0 9.6E-36 2.1E-40 316.2 22.1 259 511-785 4-268 (269)
242 cd06637 STKc_TNIK Catalytic do 100.0 1.1E-35 2.3E-40 316.4 22.1 203 509-722 4-219 (272)
243 cd05058 PTKc_Met_Ron Catalytic 100.0 2.4E-35 5.3E-40 311.8 24.6 254 517-787 1-261 (262)
244 cd05060 PTKc_Syk_like Catalyti 100.0 1.5E-35 3.2E-40 312.5 22.9 249 517-785 1-255 (257)
245 cd05047 PTKc_Tie Catalytic dom 100.0 1.6E-35 3.4E-40 314.8 23.2 249 517-786 1-269 (270)
246 cd05040 PTKc_Ack_like Catalyti 100.0 2.2E-35 4.8E-40 311.1 23.9 250 517-783 1-256 (257)
247 cd08221 STKc_Nek9 Catalytic do 100.0 1.2E-35 2.7E-40 312.8 21.9 249 512-780 1-252 (256)
248 cd08223 STKc_Nek4 Catalytic do 100.0 1.4E-35 2.9E-40 312.7 22.2 201 512-722 1-205 (257)
249 cd07846 STKc_CDKL2_3 Catalytic 100.0 9.6E-37 2.1E-41 326.9 13.6 280 511-823 1-286 (286)
250 cd05095 PTKc_DDR2 Catalytic do 100.0 1.7E-35 3.8E-40 318.9 23.4 263 510-783 4-295 (296)
251 cd08218 STKc_Nek1 Catalytic do 100.0 1E-35 2.3E-40 313.4 21.2 202 512-723 1-205 (256)
252 cd06624 STKc_ASK Catalytic dom 100.0 2.1E-35 4.5E-40 313.5 23.2 205 507-722 4-214 (268)
253 cd00192 PTKc Catalytic domain 100.0 1.9E-35 4.2E-40 311.9 22.7 248 517-782 1-261 (262)
254 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 1.9E-35 4E-40 312.7 22.3 239 517-782 1-261 (262)
255 cd07837 STKc_CdkB_plant Cataly 100.0 8.6E-36 1.9E-40 321.1 20.1 281 511-824 1-295 (295)
256 cd06631 STKc_YSK4 Catalytic do 100.0 3E-35 6.4E-40 311.7 23.8 206 512-723 1-212 (265)
257 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 1.7E-35 3.6E-40 317.1 22.1 267 511-785 4-283 (284)
258 cd05112 PTKc_Itk Catalytic dom 100.0 1.7E-35 3.6E-40 311.8 21.7 251 511-782 4-255 (256)
259 cd06643 STKc_SLK Catalytic dom 100.0 2.7E-35 5.8E-40 315.1 23.3 200 512-722 6-211 (282)
260 cd06628 STKc_MAPKKK_Byr2_like 100.0 2.9E-35 6.3E-40 312.1 22.8 206 512-723 1-216 (267)
261 cd05041 PTKc_Fes_like Catalyti 100.0 3.5E-35 7.6E-40 308.4 23.2 248 517-783 1-250 (251)
262 KOG0604 MAP kinase-activated p 100.0 7.4E-37 1.6E-41 301.4 9.5 261 510-828 60-330 (400)
263 PHA03390 pk1 serine/threonine- 100.0 1.1E-35 2.4E-40 315.4 19.1 254 505-825 8-267 (267)
264 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 5.1E-35 1.1E-39 310.7 24.2 253 517-783 1-268 (269)
265 cd05057 PTKc_EGFR_like Catalyt 100.0 5.3E-35 1.1E-39 312.3 24.0 258 510-787 6-270 (279)
266 cd05083 PTKc_Chk Catalytic dom 100.0 2.1E-35 4.5E-40 310.8 20.5 247 511-784 6-253 (254)
267 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 4.6E-35 1E-39 313.9 23.5 200 511-722 1-210 (286)
268 cd05609 STKc_MAST Catalytic do 100.0 2.4E-35 5.2E-40 319.2 21.5 207 511-722 1-219 (305)
269 cd05044 PTKc_c-ros Catalytic d 100.0 2.2E-35 4.9E-40 313.3 20.7 249 517-783 1-268 (269)
270 cd06609 STKc_MST3_like Catalyt 100.0 2.9E-35 6.2E-40 313.5 21.6 199 511-722 1-201 (274)
271 cd07864 STKc_CDK12 Catalytic d 100.0 1.1E-35 2.4E-40 321.4 18.4 276 508-823 4-302 (302)
272 cd06644 STKc_STK10_LOK Catalyt 100.0 7E-35 1.5E-39 313.6 24.5 202 510-722 11-218 (292)
273 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 2.5E-35 5.5E-40 313.8 20.7 238 518-782 2-273 (274)
274 cd06610 STKc_OSR1_SPAK Catalyt 100.0 1.4E-35 3E-40 314.4 18.5 206 511-722 1-210 (267)
275 cd07835 STKc_CDK1_like Catalyt 100.0 2.6E-35 5.7E-40 315.3 20.8 278 513-823 1-283 (283)
276 cd06656 STKc_PAK3 Catalytic do 100.0 3.1E-35 6.6E-40 317.1 21.4 200 511-723 19-219 (297)
277 cd06612 STKc_MST1_2 Catalytic 100.0 6.8E-35 1.5E-39 307.0 23.5 200 510-722 2-202 (256)
278 KOG0612 Rho-associated, coiled 100.0 1E-36 2.2E-41 346.5 10.2 280 503-842 67-358 (1317)
279 cd06611 STKc_SLK_like Catalyti 100.0 4.3E-35 9.3E-40 313.2 22.2 202 510-722 4-211 (280)
280 cd08220 STKc_Nek8 Catalytic do 100.0 3.7E-35 8E-40 309.1 21.3 201 512-723 1-205 (256)
281 cd06645 STKc_MAP4K3 Catalytic 100.0 2.7E-35 5.8E-40 312.4 20.4 201 510-722 8-212 (267)
282 cd05042 PTKc_Aatyk Catalytic d 100.0 9.1E-35 2E-39 308.7 24.2 251 518-782 2-267 (269)
283 cd06642 STKc_STK25-YSK1 Cataly 100.0 3E-35 6.4E-40 313.9 20.4 247 512-781 5-253 (277)
284 PTZ00266 NIMA-related protein 100.0 2.1E-35 4.6E-40 347.4 21.0 259 504-780 6-294 (1021)
285 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 1.1E-35 2.5E-40 313.6 17.0 239 517-782 1-257 (258)
286 cd05633 STKc_GRK3 Catalytic do 100.0 3.7E-35 8E-40 313.4 21.0 190 518-721 1-198 (279)
287 cd06613 STKc_MAP4K3_like Catal 100.0 9.8E-35 2.1E-39 307.0 24.0 202 511-723 3-208 (262)
288 cd07840 STKc_CDK9_like Catalyt 100.0 1.4E-35 3E-40 317.8 17.6 280 513-823 1-287 (287)
289 KOG4236 Serine/threonine prote 100.0 5.4E-37 1.2E-41 321.5 6.4 252 516-827 569-826 (888)
290 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 3.3E-35 7.2E-40 314.8 20.3 199 510-722 4-205 (284)
291 cd05046 PTK_CCK4 Pseudokinase 100.0 7.1E-35 1.5E-39 310.6 22.7 254 511-783 5-274 (275)
292 smart00219 TyrKc Tyrosine kina 100.0 7.7E-35 1.7E-39 306.8 22.6 250 513-781 1-257 (258)
293 cd06640 STKc_MST4 Catalytic do 100.0 1.1E-34 2.4E-39 309.5 24.0 247 511-780 4-252 (277)
294 cd07836 STKc_Pho85 Catalytic d 100.0 2.5E-35 5.4E-40 315.6 19.0 280 512-823 1-284 (284)
295 cd05578 STKc_Yank1 Catalytic d 100.0 1E-35 2.2E-40 313.9 15.6 199 512-723 1-203 (258)
296 cd07865 STKc_CDK9 Catalytic do 100.0 2.6E-35 5.7E-40 319.6 19.2 288 510-823 11-310 (310)
297 cd07849 STKc_ERK1_2_like Catal 100.0 2.9E-35 6.3E-40 323.1 19.7 289 510-829 4-301 (336)
298 PLN00009 cyclin-dependent kina 100.0 2.7E-35 5.8E-40 317.1 19.1 284 511-826 2-290 (294)
299 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 4.9E-35 1.1E-39 313.2 20.6 267 511-785 4-283 (284)
300 cd06648 STKc_PAK_II Catalytic 100.0 8E-35 1.7E-39 311.9 22.1 256 512-827 20-276 (285)
301 cd06651 STKc_MEKK3 Catalytic d 100.0 1.8E-34 4E-39 305.9 24.6 203 511-722 2-212 (266)
302 cd07833 STKc_CDKL Catalytic do 100.0 1.2E-35 2.7E-40 318.6 15.9 279 511-823 1-288 (288)
303 cd05572 STKc_cGK_PKG Catalytic 100.0 5.1E-35 1.1E-39 309.4 20.0 192 519-723 1-196 (262)
304 cd06638 STKc_myosinIIIA Cataly 100.0 5.1E-35 1.1E-39 313.6 20.2 212 501-723 8-233 (286)
305 cd08226 PK_STRAD_beta Pseudoki 100.0 2.9E-35 6.3E-40 321.9 18.6 204 517-723 4-214 (328)
306 cd06636 STKc_MAP4K4_6 Catalyti 100.0 6.6E-35 1.4E-39 312.1 20.9 210 502-722 7-229 (282)
307 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 5.2E-35 1.1E-39 313.7 20.1 200 511-722 1-206 (287)
308 cd07854 STKc_MAPK4_6 Catalytic 100.0 2.8E-35 6.1E-40 323.9 17.5 283 511-825 5-305 (342)
309 cd05074 PTKc_Tyro3 Catalytic d 100.0 1.5E-34 3.2E-39 307.7 22.4 255 513-785 1-272 (273)
310 cd07855 STKc_ERK5 Catalytic do 100.0 1.8E-35 4E-40 324.4 15.7 290 510-828 4-302 (334)
311 cd06632 STKc_MEKK1_plant Catal 100.0 2.4E-34 5.1E-39 303.2 23.5 199 512-723 1-206 (258)
312 cd05086 PTKc_Aatyk2 Catalytic 100.0 3E-34 6.4E-39 304.6 24.1 251 518-782 2-266 (268)
313 cd06605 PKc_MAPKK Catalytic do 100.0 1.7E-34 3.7E-39 305.8 21.9 199 511-722 1-202 (265)
314 cd05613 STKc_MSK1_N N-terminal 100.0 9.7E-35 2.1E-39 312.1 20.3 199 512-721 1-210 (290)
315 cd06652 STKc_MEKK2 Catalytic d 100.0 3.7E-34 8.1E-39 303.3 24.5 203 511-722 2-212 (265)
316 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 1.7E-34 3.8E-39 304.5 21.9 237 517-782 1-258 (259)
317 cd08217 STKc_Nek2 Catalytic do 100.0 2.2E-34 4.7E-39 304.6 22.6 202 512-723 1-214 (265)
318 cd07866 STKc_BUR1 Catalytic do 100.0 3.9E-35 8.5E-40 318.4 17.3 288 510-823 7-311 (311)
319 cd07877 STKc_p38alpha_MAPK14 C 100.0 6.7E-35 1.4E-39 321.2 19.2 282 504-825 10-305 (345)
320 KOG0696 Serine/threonine prote 100.0 1.1E-35 2.3E-40 303.7 11.8 279 508-843 346-629 (683)
321 cd08528 STKc_Nek10 Catalytic d 100.0 2.5E-34 5.5E-39 305.3 22.8 251 512-783 1-268 (269)
322 cd07879 STKc_p38delta_MAPK13 C 100.0 4.8E-35 1E-39 322.0 17.7 281 510-828 14-305 (342)
323 cd06639 STKc_myosinIIIB Cataly 100.0 1.7E-34 3.7E-39 310.4 21.7 210 503-723 14-237 (291)
324 cd06626 STKc_MEKK4 Catalytic d 100.0 2.5E-34 5.4E-39 304.3 22.3 203 512-722 1-209 (264)
325 cd05579 STKc_MAST_like Catalyt 100.0 8.2E-35 1.8E-39 307.8 18.5 255 519-826 1-263 (265)
326 cd06659 STKc_PAK6 Catalytic do 100.0 2E-34 4.4E-39 310.6 21.7 195 516-723 26-221 (297)
327 cd07831 STKc_MOK Catalytic dom 100.0 9.1E-35 2E-39 310.9 18.7 276 513-823 1-282 (282)
328 KOG1290 Serine/threonine prote 100.0 2.8E-35 6.1E-40 307.9 14.1 292 510-826 77-556 (590)
329 cd08225 STKc_Nek5 Catalytic do 100.0 1.6E-34 3.4E-39 304.4 20.0 201 512-722 1-205 (257)
330 KOG0596 Dual specificity; seri 100.0 5.3E-35 1.2E-39 310.0 16.3 203 510-723 360-576 (677)
331 cd06630 STKc_MEKK1 Catalytic d 100.0 3.7E-34 8.1E-39 303.7 22.8 203 512-722 1-211 (268)
332 cd06608 STKc_myosinIII_like Ca 100.0 3.6E-34 7.7E-39 304.8 22.6 203 509-722 4-221 (275)
333 cd07834 STKc_MAPK Catalytic do 100.0 5.9E-35 1.3E-39 319.9 17.0 293 512-834 1-303 (330)
334 cd06623 PKc_MAPKK_plant_like C 100.0 6.3E-34 1.4E-38 301.1 23.7 201 511-723 1-204 (264)
335 cd06629 STKc_MAPKKK_Bck1_like 100.0 5.6E-34 1.2E-38 303.2 23.3 202 512-723 2-216 (272)
336 cd06617 PKc_MKK3_6 Catalytic d 100.0 4.1E-34 9E-39 306.0 22.4 200 511-722 1-210 (283)
337 KOG4645 MAPKKK (MAP kinase kin 100.0 3.8E-36 8.2E-41 346.1 6.7 254 510-780 1234-1493(1509)
338 cd05583 STKc_MSK_N N-terminal 100.0 2.2E-34 4.8E-39 309.0 19.9 199 512-721 1-210 (288)
339 cd05118 STKc_CMGC Catalytic do 100.0 1.5E-34 3.3E-39 309.2 18.2 278 513-823 1-283 (283)
340 PTZ00024 cyclin-dependent prot 100.0 2.2E-34 4.7E-39 316.2 19.8 291 511-829 8-322 (335)
341 cd05606 STKc_beta_ARK Catalyti 100.0 3.8E-34 8.2E-39 305.5 21.1 191 518-722 1-199 (278)
342 cd06647 STKc_PAK_I Catalytic d 100.0 4.6E-34 1E-38 307.2 21.7 200 511-723 19-219 (293)
343 cd07858 STKc_TEY_MAPK_plant Ca 100.0 1E-34 2.3E-39 318.7 16.8 283 510-829 4-300 (337)
344 cd07838 STKc_CDK4_6_like Catal 100.0 1.7E-34 3.6E-39 309.6 17.9 276 513-823 1-287 (287)
345 cd07852 STKc_MAPK15 Catalytic 100.0 2.5E-34 5.4E-39 315.9 19.7 290 509-828 5-303 (337)
346 KOG0983 Mitogen-activated prot 100.0 7E-35 1.5E-39 283.8 13.4 249 512-781 93-349 (391)
347 cd06917 STKc_NAK1_like Catalyt 100.0 5.9E-34 1.3E-38 303.9 22.0 198 512-722 2-205 (277)
348 cd06641 STKc_MST3 Catalytic do 100.0 7.4E-34 1.6E-38 303.2 22.7 247 511-780 4-252 (277)
349 cd05581 STKc_PDK1 Catalytic do 100.0 1.4E-34 3.1E-39 308.8 17.0 208 511-723 1-226 (280)
350 cd07829 STKc_CDK_like Catalyti 100.0 8.7E-35 1.9E-39 310.9 15.2 277 513-823 1-282 (282)
351 cd06657 STKc_PAK4 Catalytic do 100.0 1.2E-34 2.6E-39 311.5 15.8 193 517-722 26-219 (292)
352 cd08216 PK_STRAD Pseudokinase 100.0 1.4E-33 3E-38 306.9 24.4 291 517-827 8-302 (314)
353 cd07880 STKc_p38gamma_MAPK12 C 100.0 2.3E-34 5E-39 316.6 18.3 281 509-826 13-304 (343)
354 cd06614 STKc_PAK Catalytic dom 100.0 1.5E-33 3.2E-38 302.3 23.5 203 509-723 17-220 (286)
355 KOG0664 Nemo-like MAPK-related 100.0 4.4E-36 9.4E-41 291.6 3.3 285 513-825 55-348 (449)
356 cd06607 STKc_TAO Catalytic dom 100.0 1.7E-33 3.6E-38 305.1 23.9 244 511-780 15-266 (307)
357 cd07830 STKc_MAK_like Catalyti 100.0 3E-34 6.6E-39 307.0 17.8 279 513-823 1-283 (283)
358 cd05611 STKc_Rim15_like Cataly 100.0 8.1E-34 1.8E-38 299.8 20.8 190 517-722 2-196 (260)
359 KOG0200 Fibroblast/platelet-de 100.0 7.1E-34 1.5E-38 331.6 22.0 264 505-786 290-580 (609)
360 cd07851 STKc_p38 Catalytic dom 100.0 2.2E-34 4.7E-39 317.0 16.2 280 509-826 13-304 (343)
361 cd08215 STKc_Nek Catalytic dom 100.0 1.5E-33 3.2E-38 296.8 21.8 201 512-722 1-206 (258)
362 cd06616 PKc_MKK4 Catalytic dom 100.0 1E-33 2.2E-38 303.9 20.0 199 512-722 5-213 (288)
363 KOG1024 Receptor-like protein 100.0 4.9E-34 1.1E-38 290.4 16.3 268 503-788 276-558 (563)
364 KOG1151 Tousled-like protein k 100.0 2.1E-35 4.6E-40 303.8 6.4 273 505-824 457-745 (775)
365 cd05122 PKc_STE Catalytic doma 100.0 5E-33 1.1E-37 291.6 24.6 200 512-723 1-201 (253)
366 KOG0668 Casein kinase II, alph 100.0 8.4E-35 1.8E-39 276.3 9.7 278 510-826 37-328 (338)
367 cd08530 STKc_CNK2-like Catalyt 100.0 2.1E-33 4.5E-38 295.7 21.5 247 512-780 1-252 (256)
368 cd06606 STKc_MAPKKK Catalytic 100.0 5E-33 1.1E-37 292.8 23.8 202 512-723 1-207 (260)
369 PHA02882 putative serine/threo 100.0 3.6E-33 7.8E-38 300.4 22.7 264 510-782 11-293 (294)
370 cd06653 STKc_MEKK3_like_1 Cata 100.0 6.7E-33 1.5E-37 293.5 24.2 203 511-722 2-212 (264)
371 cd06635 STKc_TAO1 Catalytic do 100.0 6.5E-33 1.4E-37 301.9 24.3 245 513-783 27-279 (317)
372 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 8.9E-34 1.9E-38 309.8 17.4 286 505-827 4-295 (328)
373 cd06627 STKc_Cdc7_like Catalyt 100.0 3.8E-33 8.2E-38 293.2 21.5 200 512-723 1-203 (254)
374 cd07857 STKc_MPK1 Catalytic do 100.0 1.4E-33 3E-38 309.2 18.7 281 512-824 1-296 (332)
375 KOG1006 Mitogen-activated prot 100.0 2.5E-35 5.4E-40 286.1 4.2 247 515-781 68-327 (361)
376 cd06618 PKc_MKK7 Catalytic dom 100.0 5E-33 1.1E-37 299.8 21.7 200 510-722 14-221 (296)
377 PLN03224 probable serine/threo 100.0 1.6E-33 3.4E-38 317.0 18.4 271 509-825 143-505 (507)
378 KOG0586 Serine/threonine prote 100.0 4.8E-34 1E-38 308.9 13.2 257 510-829 55-315 (596)
379 cd05610 STKc_MASTL Catalytic d 100.0 3.4E-33 7.4E-38 331.0 21.7 146 511-661 4-153 (669)
380 KOG0603 Ribosomal protein S6 k 100.0 4.2E-34 9.2E-39 310.9 12.2 245 510-825 321-568 (612)
381 cd05123 STKc_AGC Catalytic dom 100.0 3.4E-33 7.4E-38 293.0 17.9 193 519-723 1-197 (250)
382 cd08222 STKc_Nek11 Catalytic d 100.0 7.5E-33 1.6E-37 292.4 20.5 200 512-722 1-208 (260)
383 KOG0665 Jun-N-terminal kinase 100.0 2E-34 4.3E-39 287.7 7.5 282 510-824 16-314 (369)
384 cd05576 STKc_RPK118_like Catal 100.0 3.8E-33 8.3E-38 290.3 16.9 179 522-720 4-183 (237)
385 PLN03225 Serine/threonine-prot 100.0 1.8E-33 4E-38 324.9 14.9 277 509-828 130-458 (566)
386 cd06634 STKc_TAO2 Catalytic do 100.0 2.4E-32 5.3E-37 296.1 22.7 196 511-722 15-217 (308)
387 cd06633 STKc_TAO3 Catalytic do 100.0 5.2E-32 1.1E-36 294.2 24.5 195 513-723 23-224 (313)
388 KOG1035 eIF-2alpha kinase GCN2 100.0 3.4E-33 7.3E-38 320.6 15.7 257 508-780 476-870 (1351)
389 KOG4250 TANK binding protein k 100.0 5.1E-33 1.1E-37 304.6 16.0 201 513-724 15-229 (732)
390 KOG0587 Traf2- and Nck-interac 100.0 1.1E-32 2.4E-37 307.3 16.2 257 503-780 11-281 (953)
391 KOG0614 cGMP-dependent protein 100.0 1.4E-33 3.1E-38 295.3 8.2 203 510-725 419-625 (732)
392 KOG0695 Serine/threonine prote 100.0 4E-33 8.7E-38 277.9 10.5 203 506-720 245-452 (593)
393 KOG0670 U4/U6-associated splic 100.0 9.9E-34 2.1E-38 297.3 4.7 302 496-825 417-751 (752)
394 KOG1167 Serine/threonine prote 100.0 1.2E-32 2.5E-37 285.7 10.4 297 504-825 29-386 (418)
395 KOG1027 Serine/threonine prote 100.0 6.7E-33 1.4E-37 307.6 5.1 256 512-828 510-775 (903)
396 KOG0608 Warts/lats-like serine 100.0 7.4E-32 1.6E-36 288.6 11.7 210 510-724 628-876 (1034)
397 KOG0984 Mitogen-activated prot 100.0 1.3E-31 2.8E-36 251.2 11.3 216 505-731 40-264 (282)
398 smart00220 S_TKc Serine/Threon 100.0 1.4E-29 3.1E-34 263.4 22.1 187 523-722 1-189 (244)
399 KOG4194 Membrane glycoprotein 100.0 9.4E-31 2E-35 278.5 1.0 281 3-287 159-467 (873)
400 PLN00113 leucine-rich repeat r 100.0 4.8E-28 1E-32 302.7 18.8 265 2-273 269-537 (968)
401 KOG0576 Mitogen-activated prot 100.0 2.6E-29 5.6E-34 272.0 5.3 300 510-830 14-318 (829)
402 KOG1152 Signal transduction se 100.0 1.7E-28 3.6E-33 261.4 10.7 196 511-720 561-770 (772)
403 cd00180 PKc Catalytic domain o 99.9 2.5E-26 5.3E-31 233.1 21.7 210 519-781 1-214 (215)
404 smart00221 STYKc Protein kinas 99.9 3.9E-26 8.5E-31 234.9 21.1 199 513-721 1-202 (225)
405 KOG1345 Serine/threonine kinas 99.9 1.5E-26 3.3E-31 225.6 9.6 254 509-784 22-287 (378)
406 KOG4194 Membrane glycoprotein 99.9 3E-27 6.4E-32 252.0 4.6 262 2-271 87-353 (873)
407 KOG0444 Cytoskeletal regulator 99.9 2.6E-27 5.6E-32 253.4 -2.4 259 9-270 95-373 (1255)
408 PLN00181 protein SPA1-RELATED; 99.9 2.9E-25 6.4E-30 270.0 10.3 201 563-780 28-264 (793)
409 KOG0195 Integrin-linked kinase 99.9 4.2E-25 9.2E-30 215.2 8.3 247 516-785 195-446 (448)
410 KOG4237 Extracellular matrix p 99.9 2.7E-27 5.9E-32 242.3 -8.7 264 18-288 68-375 (498)
411 KOG0472 Leucine-rich repeat pr 99.9 7.4E-27 1.6E-31 239.2 -9.6 256 2-272 54-310 (565)
412 smart00750 KIND kinase non-cat 99.9 2.5E-23 5.5E-28 205.8 15.9 168 592-786 1-170 (176)
413 KOG0472 Leucine-rich repeat pr 99.9 7.4E-26 1.6E-30 231.8 -4.6 260 2-272 146-541 (565)
414 PRK09188 serine/threonine prot 99.9 2.7E-23 5.9E-28 224.6 14.2 174 505-694 12-195 (365)
415 KOG0444 Cytoskeletal regulator 99.9 8.5E-26 1.8E-30 241.8 -5.6 259 2-271 16-280 (1255)
416 KOG1164 Casein kinase (serine/ 99.9 5.5E-22 1.2E-26 215.5 22.3 265 512-788 19-300 (322)
417 KOG0590 Checkpoint kinase and 99.9 1.3E-23 2.8E-28 242.0 1.3 260 515-827 322-592 (601)
418 KOG1165 Casein kinase (serine/ 99.9 7.2E-21 1.6E-25 191.3 18.7 275 512-798 29-312 (449)
419 KOG1163 Casein kinase (serine/ 99.9 1.2E-21 2.6E-26 188.4 12.5 271 509-790 13-289 (341)
420 COG0515 SPS1 Serine/threonine 99.9 5.9E-20 1.3E-24 199.9 24.6 257 513-781 2-275 (384)
421 PRK15370 E3 ubiquitin-protein 99.8 1.3E-20 2.9E-25 221.0 15.2 238 2-273 187-429 (754)
422 PRK15387 E3 ubiquitin-protein 99.8 3.5E-20 7.7E-25 215.9 17.9 232 2-273 210-459 (788)
423 cd05147 RIO1_euk RIO kinase fa 99.8 2.7E-20 5.8E-25 185.3 12.5 140 516-663 2-168 (190)
424 PRK10359 lipopolysaccharide co 99.8 1.4E-20 3.1E-25 188.9 10.1 172 508-713 28-216 (232)
425 KOG1240 Protein kinase contain 99.8 1.6E-20 3.4E-25 214.5 9.6 251 512-781 24-291 (1431)
426 KOG0603 Ribosomal protein S6 k 99.8 2.2E-21 4.7E-26 212.1 2.5 222 518-772 1-229 (612)
427 PRK12274 serine/threonine prot 99.8 2.4E-19 5.3E-24 175.9 13.7 191 514-721 5-209 (218)
428 cd05145 RIO1_like RIO kinase f 99.8 4E-19 8.7E-24 177.6 15.2 139 516-663 2-168 (190)
429 KOG0617 Ras suppressor protein 99.8 8.4E-22 1.8E-26 180.0 -5.7 167 37-231 29-195 (264)
430 KOG1023 Natriuretic peptide re 99.8 2.8E-19 6E-24 196.4 11.5 217 561-787 1-226 (484)
431 PF14531 Kinase-like: Kinase-l 99.8 3.3E-18 7.2E-23 177.1 14.8 229 515-772 16-288 (288)
432 PRK10345 hypothetical protein; 99.8 4.2E-18 9E-23 171.0 14.5 137 513-659 4-156 (210)
433 PRK15370 E3 ubiquitin-protein 99.8 1.5E-18 3.2E-23 203.9 13.0 224 17-272 178-401 (754)
434 PRK15387 E3 ubiquitin-protein 99.8 3.7E-18 8E-23 199.1 16.0 213 2-252 231-460 (788)
435 KOG0618 Serine/threonine phosp 99.8 1.6E-20 3.6E-25 211.4 -5.2 241 17-271 241-488 (1081)
436 KOG1166 Mitotic checkpoint ser 99.8 7.7E-18 1.7E-22 197.4 15.8 253 505-787 692-955 (974)
437 PLN03210 Resistant to P. syrin 99.8 2.1E-17 4.5E-22 207.6 20.7 253 6-268 577-878 (1153)
438 KOG0606 Microtubule-associated 99.7 3.7E-19 8E-24 203.5 3.6 172 510-723 82-262 (1205)
439 PLN03210 Resistant to P. syrin 99.7 6.6E-17 1.4E-21 203.1 23.0 248 8-270 603-904 (1153)
440 KOG0618 Serine/threonine phosp 99.7 9.3E-20 2E-24 205.4 -3.6 162 107-276 258-447 (1081)
441 KOG4237 Extracellular matrix p 99.7 6.7E-20 1.4E-24 188.4 -6.0 246 21-275 50-338 (498)
442 PRK14879 serine/threonine prot 99.7 7.7E-17 1.7E-21 164.4 14.6 134 517-661 2-143 (211)
443 KOG0617 Ras suppressor protein 99.7 1E-19 2.2E-24 166.4 -5.9 161 13-179 29-190 (264)
444 KOG4158 BRPK/PTEN-induced prot 99.7 7.6E-17 1.6E-21 165.9 12.9 202 565-783 274-512 (598)
445 cd05144 RIO2_C RIO kinase fami 99.7 1.3E-16 2.8E-21 160.9 14.2 140 509-663 13-176 (198)
446 smart00090 RIO RIO-like kinase 99.7 1.1E-16 2.3E-21 165.0 13.0 143 512-663 29-199 (237)
447 TIGR03724 arch_bud32 Kae1-asso 99.7 1.6E-16 3.5E-21 160.4 13.6 131 518-662 1-139 (199)
448 PRK09605 bifunctional UGMP fam 99.7 2.7E-16 5.9E-21 182.6 16.4 140 508-661 330-476 (535)
449 cd00116 LRR_RI Leucine-rich re 99.7 6.1E-19 1.3E-23 192.2 -5.8 267 3-271 8-319 (319)
450 KOG1033 eIF-2alpha kinase PEK/ 99.7 4.1E-17 8.9E-22 175.6 4.2 128 580-714 329-457 (516)
451 cd00116 LRR_RI Leucine-rich re 99.7 3.8E-18 8.3E-23 185.9 -4.4 241 9-249 43-319 (319)
452 cd05119 RIO RIO kinase family, 99.6 7E-15 1.5E-19 146.9 12.9 136 516-663 2-165 (187)
453 cd05120 APH_ChoK_like Aminogly 99.6 1E-14 2.3E-19 139.7 13.3 135 515-661 2-138 (155)
454 KOG0590 Checkpoint kinase and 99.6 5E-16 1.1E-20 179.4 0.8 262 511-825 20-291 (601)
455 PRK01723 3-deoxy-D-manno-octul 99.6 3.6E-14 7.8E-19 146.6 14.1 135 516-661 36-191 (239)
456 KOG0532 Leucine-rich repeat (L 99.5 1.9E-15 4E-20 162.6 -4.7 200 21-230 54-255 (722)
457 KOG1266 Protein kinase [Signal 99.4 3.3E-13 7.1E-18 136.5 9.7 154 560-717 120-280 (458)
458 TIGR01982 UbiB 2-polyprenylphe 99.4 8.2E-13 1.8E-17 148.3 12.6 141 516-663 122-308 (437)
459 COG4886 Leucine-rich repeat (L 99.3 1.4E-12 2.9E-17 146.6 7.5 170 46-221 98-268 (394)
460 KOG1243 Protein kinase [Genera 99.3 8.3E-12 1.8E-16 138.6 13.2 166 532-715 34-199 (690)
461 PRK04750 ubiB putative ubiquin 99.3 8.1E-12 1.8E-16 141.7 11.5 142 511-663 120-315 (537)
462 KOG0532 Leucine-rich repeat (L 99.3 1.2E-13 2.5E-18 149.0 -3.4 193 16-218 74-270 (722)
463 COG4886 Leucine-rich repeat (L 99.3 1.7E-12 3.7E-17 145.8 5.1 200 21-229 97-298 (394)
464 KOG1259 Nischarin, modulator o 99.3 4.8E-13 1E-17 133.3 0.4 221 40-273 181-413 (490)
465 cd05151 ChoK Choline Kinase (C 99.3 2E-11 4.4E-16 119.7 10.7 131 516-661 3-136 (170)
466 KOG0601 Cyclin-dependent kinas 99.3 1.1E-11 2.4E-16 136.7 8.7 247 511-779 114-377 (524)
467 KOG3207 Beta-tubulin folding c 99.2 9.6E-13 2.1E-17 138.1 -0.9 89 185-273 247-340 (505)
468 KOG0606 Microtubule-associated 99.2 6.5E-12 1.4E-16 145.0 5.6 272 509-832 802-1104(1205)
469 PF14580 LRR_9: Leucine-rich r 99.2 3.3E-12 7.2E-17 123.3 2.5 127 38-169 16-148 (175)
470 KOG1909 Ran GTPase-activating 99.2 4.1E-13 8.9E-18 137.4 -4.5 241 12-271 25-310 (382)
471 KOG3207 Beta-tubulin folding c 99.2 2.6E-12 5.7E-17 134.9 -0.5 205 15-221 119-339 (505)
472 KOG0531 Protein phosphatase 1, 99.2 3.2E-12 7E-17 143.8 -1.1 195 16-221 71-268 (414)
473 KOG1259 Nischarin, modulator o 99.2 4.9E-12 1.1E-16 126.2 -0.2 224 17-253 182-415 (490)
474 cd05146 RIO3_euk RIO kinase fa 99.1 6.5E-10 1.4E-14 109.7 14.5 137 516-663 2-175 (197)
475 KOG0601 Cyclin-dependent kinas 99.1 4.2E-11 9.2E-16 132.2 6.7 246 506-780 260-513 (524)
476 KOG3087 Serine/threonine prote 99.1 7.7E-10 1.7E-14 104.2 13.9 144 515-662 11-166 (229)
477 KOG0531 Protein phosphatase 1, 99.1 3.9E-12 8.4E-17 143.2 -3.1 237 18-271 50-289 (414)
478 cd05154 ACAD10_11_like Acyl-Co 99.1 6.5E-10 1.4E-14 114.1 12.3 142 517-661 4-206 (223)
479 PF14580 LRR_9: Leucine-rich r 99.1 6E-11 1.3E-15 114.7 3.6 127 13-146 15-148 (175)
480 COG3642 Mn2+-dependent serine/ 99.1 2.3E-09 5E-14 101.7 13.4 132 517-662 2-141 (204)
481 PLN03150 hypothetical protein; 99.1 2.8E-10 6.1E-15 133.9 8.7 109 42-151 419-528 (623)
482 PLN03150 hypothetical protein; 99.0 4.5E-10 9.8E-15 132.2 9.4 112 66-178 419-532 (623)
483 KOG3741 Poly(A) ribonuclease s 98.9 3.9E-08 8.4E-13 106.4 18.6 167 524-717 289-474 (655)
484 KOG1859 Leucine-rich repeat pr 98.9 9.2E-12 2E-16 137.6 -9.5 185 58-278 102-298 (1096)
485 PF01163 RIO1: RIO1 family; I 98.9 2.1E-08 4.5E-13 98.8 12.9 126 526-663 1-157 (188)
486 PRK15123 lipopolysaccharide co 98.9 4.1E-08 8.8E-13 102.6 14.9 135 523-661 34-194 (268)
487 KOG1909 Ran GTPase-activating 98.8 4.8E-11 1E-15 122.4 -7.3 210 11-220 52-310 (382)
488 KOG4658 Apoptotic ATPase [Sign 98.7 1.3E-08 2.8E-13 122.4 7.4 229 18-253 546-810 (889)
489 PF13855 LRR_8: Leucine rich r 98.7 8.4E-09 1.8E-13 81.9 3.4 60 18-77 2-61 (61)
490 PF13855 LRR_8: Leucine rich r 98.7 9.2E-09 2E-13 81.7 3.2 59 42-100 2-60 (61)
491 COG4248 Uncharacterized protei 98.7 1.1E-06 2.3E-11 93.0 18.5 260 515-790 15-305 (637)
492 COG0478 RIO-like serine/threon 98.7 1.9E-07 4E-12 94.2 11.9 138 512-663 92-253 (304)
493 KOG2137 Protein kinase [Signal 98.6 9.5E-09 2.1E-13 115.2 1.8 184 616-813 106-292 (700)
494 KOG2982 Uncharacterized conser 98.6 5.6E-09 1.2E-13 104.7 -1.5 213 34-272 38-262 (418)
495 KOG2982 Uncharacterized conser 98.5 1.3E-08 2.8E-13 102.3 -1.2 213 9-221 37-262 (418)
496 PRK09902 hypothetical protein; 98.5 1.7E-06 3.8E-11 85.6 13.2 137 520-661 27-179 (216)
497 COG5238 RNA1 Ran GTPase-activa 98.5 9.2E-09 2E-13 102.0 -2.8 248 16-275 29-319 (388)
498 KOG4579 Leucine-rich repeat (L 98.5 3.9E-09 8.4E-14 94.2 -5.3 110 42-156 28-141 (177)
499 COG5238 RNA1 Ran GTPase-activa 98.5 1.6E-08 3.5E-13 100.3 -2.0 219 37-272 26-285 (388)
500 KOG1859 Leucine-rich repeat pr 98.5 1.2E-09 2.5E-14 121.4 -11.1 102 66-174 165-267 (1096)
No 1
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=4e-68 Score=663.03 Aligned_cols=647 Identities=26% Similarity=0.423 Sum_probs=464.3
Q ss_pred CccccccCCccccCCCCCCEEEccCCcCCccCccccCCCCCCcEEEcccCcCCccCccccccCCCCCEEEccCCccccCC
Q 003158 2 WNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQI 81 (843)
Q Consensus 2 ~N~i~~~~p~~i~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 81 (843)
+|++++.+|..+.++++|+.|+|++|.+.+..|..++.+++|+.|+|++|.+++.+|..+..+++|+.|+|++|++++.+
T Consensus 293 ~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~~~~L~~L~Ls~n~l~~~~ 372 (968)
T PLN00113 293 DNSLSGEIPELVIQLQNLEILHLFSNNFTGKIPVALTSLPRLQVLQLWSNKFSGEIPKNLGKHNNLTVLDLSTNNLTGEI 372 (968)
T ss_pred CCeeccCCChhHcCCCCCcEEECCCCccCCcCChhHhcCCCCCEEECcCCCCcCcCChHHhCCCCCcEEECCCCeeEeeC
Confidence 68899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccCCCCCCceeeccCCCCCCCCCcccCCCCCCcEEEcCCCCCCCCCCCccccCCCCCcEEEcCCCCCCCCCCC-CCCC
Q 003158 82 PPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMPD-LSRI 160 (843)
Q Consensus 82 ~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l 160 (843)
|..+..+++|+.|++++|++.+.+|..+..+++|+.|+|++|++++ .+|..|.++++|+.|+|++|.+++.++. +..+
T Consensus 373 p~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~L~~L~L~~n~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l 451 (968)
T PLN00113 373 PEGLCSSGNLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDNSFSG-ELPSEFTKLPLVYFLDISNNNLQGRINSRKWDM 451 (968)
T ss_pred ChhHhCcCCCCEEECcCCEecccCCHHHhCCCCCCEEECcCCEeee-ECChhHhcCCCCCEEECcCCcccCccChhhccC
Confidence 9999999999999999999999999999999999999999999987 6788999999999999999999987774 7789
Q ss_pred CCCCEEEcccCcCCCCCCCCCCCcCcCEEEccCCcCCCCCCcccCCCCCCcEEeCcCccCCCCCCchhhccccCCCCcce
Q 003158 161 PNLGYLDLSSNQLNGSIPPGRLSLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETF 240 (843)
Q Consensus 161 ~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~l~~~~L~ 240 (843)
++|+.|+|++|++.+.+|......+|+.|+|++|++++.+|..|.++++|+.|+|++|++.+.+|..+..+.+ |+
T Consensus 452 ~~L~~L~L~~n~~~~~~p~~~~~~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~-----L~ 526 (968)
T PLN00113 452 PSLQMLSLARNKFFGGLPDSFGSKRLENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKLSGEIPDELSSCKK-----LV 526 (968)
T ss_pred CCCcEEECcCceeeeecCcccccccceEEECcCCccCCccChhhhhhhccCEEECcCCcceeeCChHHcCccC-----CC
Confidence 9999999999999988888776678999999999999999999999999999999999999999988876554 55
Q ss_pred eEEcCCCCCCCCCCC-C-cCCCCcEEEeccCcccccCCcccccCCCCCCCcccccCCCCCCCcCCCccCCCCccCCCCCC
Q 003158 241 ILDFQNNNLTNISGS-F-NIPPNVTVRLRGNPFCLNTNAEQFCGSHSDDDNEIDRSTNSTLDCRAQSCPTDYEYSPTSPI 318 (843)
Q Consensus 241 ~L~l~~N~l~~~~~~-~-~~~~l~~l~l~~Np~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~p~~~~ 318 (843)
.|+|++|++++..+. + .++.|..|++++|.+.-.-. ..+.. +. .-..++.+.+.. .+ ..|..
T Consensus 527 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~l~~-l~-~L~~l~ls~N~l-~~---~~p~~--------- 590 (968)
T PLN00113 527 SLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSGEIP-KNLGN-VE-SLVQVNISHNHL-HG---SLPST--------- 590 (968)
T ss_pred EEECCCCcccccCChhHhCcccCCEEECCCCcccccCC-hhHhc-Cc-ccCEEeccCCcc-ee---eCCCc---------
Confidence 899999999876543 3 78889999999998752111 00000 00 000011111100 00 00000
Q ss_pred cceeccceeeeEEecCCCCCCChhHHHHHHHHHhhcccccceeeeeeEEEeecCCcceeeeeecccccCCCCCceeeecc
Q 003158 319 RCFCAAPLLVGYRLKSPGLSYFPAYKNLFEEYMTSGLKLNLYQLDIDSFRWEKGPRLKMYLKLFPVYDNSSGNSYVFNAS 398 (843)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (843)
..+.. +...
T Consensus 591 -------------------~~~~~----------------------------------------------------~~~~ 599 (968)
T PLN00113 591 -------------------GAFLA----------------------------------------------------INAS 599 (968)
T ss_pred -------------------chhcc----------------------------------------------------cChh
Confidence 00000 0000
Q ss_pred ccchhcccccccccCCCCCccceeeeeccccCCCCCCCCCCCCCCCCccceeehhHHHHHHHHHHHHHHHHHHHhhcccc
Q 003158 399 EVGRIRSMFTGWNIPDSDIFGPYELINFTLQGPYRDVFPPSRNSGISKAALAGIILGAIAGAVTISAIVSLLIVRAHMKN 478 (843)
Q Consensus 399 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~g~~~~~~~~~~~~~~~~~~~~~~~ 478 (843)
+...+...+|+ ++....++......... ...+|++++++++++++++.++++++++++
T Consensus 600 -----------~~~~n~~lc~~----------~~~~~~~~c~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 657 (968)
T PLN00113 600 -----------AVAGNIDLCGG----------DTTSGLPPCKRVRKTPS-WWFYITCTLGAFLVLALVAFGFVFIRGRNN 657 (968)
T ss_pred -----------hhcCCccccCC----------ccccCCCCCccccccce-eeeehhHHHHHHHHHHHHHHHHHHHHhhhc
Confidence 00000011110 00000000000001111 111222222222222222212222222111
Q ss_pred cccccccccCCCccccc-----CCcccccHHHHHHHHcCCCCCCcccccCCeeEEEEEe-CCCcEEEEEEeccCChhhHH
Q 003158 479 YHAISRRRHSSKTSIKI-----DGVRSFTYGEMALATNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQGEK 552 (843)
Q Consensus 479 ~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~ 552 (843)
....+.. ........ .....+++++. ...|...+.||+|+||.||+|.. .+++.||||++......
T Consensus 658 -~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~--- 729 (968)
T PLN00113 658 -LELKRVE-NEDGTWELQFFDSKVSKSITINDI---LSSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNSI--- 729 (968)
T ss_pred -ccccccc-cccccccccccccccchhhhHHHH---HhhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCccc---
Confidence 1111111 01110110 00112333333 35678889999999999999996 57899999998743322
Q ss_pred HHHHHHHHHHhccCCcccceeeeeecCCcEEEEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCC
Q 003158 553 EFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPP 632 (843)
Q Consensus 553 ~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ 632 (843)
..+|++++++++||||++++|+|.+++..++||||+++|+|.++++. ++|..+..++.|+++||+|||+.+.++
T Consensus 730 -~~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~-----l~~~~~~~i~~~ia~~L~yLH~~~~~~ 803 (968)
T PLN00113 730 -PSSEIADMGKLQHPNIVKLIGLCRSEKGAYLIHEYIEGKNLSEVLRN-----LSWERRRKIAIGIAKALRFLHCRCSPA 803 (968)
T ss_pred -cHHHHHHHhhCCCCCcceEEEEEEcCCCCEEEEeCCCCCcHHHHHhc-----CCHHHHHHHHHHHHHHHHHhccCCCCC
Confidence 23468899999999999999999999999999999999999999953 789999999999999999999776666
Q ss_pred EEeccCCCCcEEEcCCCcEEEeeccccccCCCCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHH
Q 003158 633 VFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLEL 712 (843)
Q Consensus 633 iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~el 712 (843)
|+||||||+||+++.++.+++. ||.+..... .....+++.|+|||++.+..++.++|||||||++|||
T Consensus 804 iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~~-----------~~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el 871 (968)
T PLN00113 804 VVVGNLSPEKIIIDGKDEPHLR-LSLPGLLCT-----------DTKCFISSAYVAPETRETKDITEKSDIYGFGLILIEL 871 (968)
T ss_pred eecCCCCHHhEEECCCCceEEE-ecccccccc-----------CCCccccccccCcccccCCCCCcccchhhHHHHHHHH
Confidence 9999999999999999988876 665543211 1123578999999999999999999999999999999
Q ss_pred HhCCCCCCCC----cchHHHHHHHhhcccchhhccCCCC---CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHh
Q 003158 713 LTGMQPISHG----KNIVREVNIAYQSSMMFSVIDGNMG---SYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 785 (843)
Q Consensus 713 ltg~~pf~~~----~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~ 785 (843)
+||+.||... ....++.+..+........+++... ..+.+...++.+++.+||+.+|++||+|.++++.|+++
T Consensus 872 ~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~L~~~ 951 (968)
T PLN00113 872 LTGKSPADAEFGVHGSIVEWARYCYSDCHLDMWIDPSIRGDVSVNQNEIVEVMNLALHCTATDPTARPCANDVLKTLESA 951 (968)
T ss_pred HhCCCCCCcccCCCCcHHHHHHHhcCccchhheeCccccCCCCccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHHHHHh
Confidence 9999998542 2233444333222222233333321 23456677889999999999999999999999999988
Q ss_pred hhhC
Q 003158 786 WNMM 789 (843)
Q Consensus 786 ~~~~ 789 (843)
....
T Consensus 952 ~~~~ 955 (968)
T PLN00113 952 SRSS 955 (968)
T ss_pred hccc
Confidence 6543
No 2
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.3e-50 Score=436.25 Aligned_cols=284 Identities=52% Similarity=0.884 Sum_probs=247.3
Q ss_pred CcccccHHHHHHHHcCCCCCCcccccCCeeEEEEEeCCCcEEEEEEeccCChhhHHHHHHHHHHHHhccCCcccceeeee
Q 003158 497 GVRSFTYGEMALATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYC 576 (843)
Q Consensus 497 ~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~ 576 (843)
..+.|+|.++..+|++|...+.||+|+||.||+|..++|+.||||++........++|.+|++++.+++|||+|+|+|||
T Consensus 61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGyC 140 (361)
T KOG1187|consen 61 PLRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGYC 140 (361)
T ss_pred CcceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEEE
Confidence 45679999999999999999999999999999999999999999988764433156699999999999999999999999
Q ss_pred ecCC-cEEEEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEee
Q 003158 577 DEEG-EQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVAD 655 (843)
Q Consensus 577 ~~~~-~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~D 655 (843)
.+.+ +.+||||||++|+|.++|+.....+++|..|++||.++|+||+|||+.+.++||||||||+|||+|+++++||+|
T Consensus 141 ~e~~~~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKlsD 220 (361)
T KOG1187|consen 141 LEGGEHRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKLSD 220 (361)
T ss_pred ecCCceEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEccC
Confidence 9988 599999999999999999875543899999999999999999999999999999999999999999999999999
Q ss_pred ccccccCCCCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCC-----cchHHHHH
Q 003158 656 FGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG-----KNIVREVN 730 (843)
Q Consensus 656 fGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~-----~~~~~~~~ 730 (843)
||+|+..+... ....+...||.+|+|||++..+..+.++||||||+++.|++||+.+.+.. ....+|..
T Consensus 221 FGLa~~~~~~~------~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~ 294 (361)
T KOG1187|consen 221 FGLAKLGPEGD------TSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAK 294 (361)
T ss_pred ccCcccCCccc------cceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHH
Confidence 99997654200 11111117999999999999999999999999999999999999888743 23567776
Q ss_pred HHhhcccchhhccCCCC--CCCH-HHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhh
Q 003158 731 IAYQSSMMFSVIDGNMG--SYPS-ECVEKFIKLALKCCQDETDARPSMSEVMRELESIW 786 (843)
Q Consensus 731 ~~~~~~~~~~~~~~~~~--~~~~-~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~ 786 (843)
..+....+.+++|+.+. .++. +....+..++..|++.+|..||+|.+|+++|+.+.
T Consensus 295 ~~~~~~~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~~ 353 (361)
T KOG1187|consen 295 PLLEEGKLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKELEGIL 353 (361)
T ss_pred HHHHCcchhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhhc
Confidence 67777788899999874 4554 67888999999999999999999999999996654
No 3
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=9.4e-49 Score=401.72 Aligned_cols=264 Identities=25% Similarity=0.411 Sum_probs=210.8
Q ss_pred HHcCCCCCCcccccCCeeEEEEEe-CCCcEEEEEEeccCChh-------hHHHHHHHHHHHHhccCCcccceeeeeecCC
Q 003158 509 ATNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQ-------GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEG 580 (843)
Q Consensus 509 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-------~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~ 580 (843)
..+.|.+.+.||+|+||.|-+|.. ++|+.||||++++.... ....+.+|+++|++++|||||+++++|...+
T Consensus 170 ~~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~d 249 (475)
T KOG0615|consen 170 FNDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPD 249 (475)
T ss_pred hcceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCC
Confidence 456788889999999999999994 57999999999753211 2234679999999999999999999999999
Q ss_pred cEEEEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCC---CcEEEeecc
Q 003158 581 EQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHK---FTAKVADFG 657 (843)
Q Consensus 581 ~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~---~~~kl~DfG 657 (843)
..|+|||||+||+|.+.+-.++ .+.+...+.++.|++.|+.|||++| |+||||||+|||+..+ ..+||+|||
T Consensus 250 s~YmVlE~v~GGeLfd~vv~nk--~l~ed~~K~~f~Qll~avkYLH~~G---I~HRDiKPeNILl~~~~e~~llKItDFG 324 (475)
T KOG0615|consen 250 SSYMVLEYVEGGELFDKVVANK--YLREDLGKLLFKQLLTAVKYLHSQG---IIHRDIKPENILLSNDAEDCLLKITDFG 324 (475)
T ss_pred ceEEEEEEecCccHHHHHHhcc--ccccchhHHHHHHHHHHHHHHHHcC---cccccCCcceEEeccCCcceEEEecccc
Confidence 9999999999999999986654 4777888899999999999999999 9999999999999766 789999999
Q ss_pred ccccCCCCCCCCcccceeeeeecccCCccCchhcccCCC---CchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhh
Q 003158 658 LSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKL---TDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQ 734 (843)
Q Consensus 658 la~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~---~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~ 734 (843)
+|+.... .......+||+.|.|||++.+... ..++|+||+||+||-+++|..||........
T Consensus 325 lAK~~g~--------~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~s------- 389 (475)
T KOG0615|consen 325 LAKVSGE--------GSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPS------- 389 (475)
T ss_pred hhhcccc--------ceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCcc-------
Confidence 9998652 345667899999999999987543 3478999999999999999999975432110
Q ss_pred cccchhhccCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCCCC
Q 003158 735 SSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSS 814 (843)
Q Consensus 735 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~sa 814 (843)
....+..+.....|. .+ .+.+.++.|||++||+.||++|+|+
T Consensus 390 --l~eQI~~G~y~f~p~-~w-----------------------------------~~Iseea~dlI~~mL~VdP~~R~s~ 431 (475)
T KOG0615|consen 390 --LKEQILKGRYAFGPL-QW-----------------------------------DRISEEALDLINWMLVVDPENRPSA 431 (475)
T ss_pred --HHHHHhcCcccccCh-hh-----------------------------------hhhhHHHHHHHHHhhEeCcccCcCH
Confidence 001111222111111 11 1123345589999999999999999
Q ss_pred ccCCCCCcccCCCCCC
Q 003158 815 SSMLKHPYVSSDVSGS 830 (843)
Q Consensus 815 ~e~L~Hp~f~~~~~~~ 830 (843)
+|||+||||.....++
T Consensus 432 ~eaL~hpW~~~~~~~s 447 (475)
T KOG0615|consen 432 DEALNHPWFKDAPCLS 447 (475)
T ss_pred HHHhcChhhhcccccc
Confidence 9999999998766554
No 4
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=2.7e-47 Score=389.48 Aligned_cols=247 Identities=27% Similarity=0.432 Sum_probs=202.4
Q ss_pred CCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccC-ChhhHHHHHHHHHHHHhccCCcccceeeeeecCC-cEEEEEecC
Q 003158 513 FNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEG-SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEG-EQMLVYEFM 589 (843)
Q Consensus 513 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~-~~~lV~e~~ 589 (843)
.+..+.||+|..|+|||++++ +++.+|+|.+... .....+++.+|+++++..+||+||++||.|.+++ ...++||||
T Consensus 81 le~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI~mEYM 160 (364)
T KOG0581|consen 81 LERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISICMEYM 160 (364)
T ss_pred hhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEeehhhc
Confidence 344678999999999999975 7899999999643 3344689999999999999999999999999988 599999999
Q ss_pred CCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhc-CCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCCC
Q 003158 590 SNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHT-EADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 668 (843)
Q Consensus 590 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~-~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 668 (843)
++|+|++++... ..+++...-+|+.+|++||.|||+ ++ ||||||||+|||+++.|+|||+|||.+..+...
T Consensus 161 DgGSLd~~~k~~--g~i~E~~L~~ia~~VL~GL~YLh~~~~---IIHRDIKPsNlLvNskGeVKicDFGVS~~lvnS--- 232 (364)
T KOG0581|consen 161 DGGSLDDILKRV--GRIPEPVLGKIARAVLRGLSYLHEERK---IIHRDIKPSNLLVNSKGEVKICDFGVSGILVNS--- 232 (364)
T ss_pred CCCCHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHhhccC---eeeccCCHHHeeeccCCCEEeccccccHHhhhh---
Confidence 999999999765 458899999999999999999996 66 999999999999999999999999999876532
Q ss_pred CcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCcc-hHHHHHHHhhcccchhhccCCCC
Q 003158 669 GIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKN-IVREVNIAYQSSMMFSVIDGNMG 747 (843)
Q Consensus 669 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 747 (843)
......||..|||||.+.+..|+.++||||||++++|+.+|+.||..... ...+. +.+..++++..+
T Consensus 233 ------~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~------~Ll~~Iv~~ppP 300 (364)
T KOG0581|consen 233 ------IANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIF------ELLCAIVDEPPP 300 (364)
T ss_pred ------hcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHH------HHHHHHhcCCCC
Confidence 33567899999999999999999999999999999999999999976411 11111 122345555566
Q ss_pred CCCHH-HHHHHHHHHHHhcccCCCCCCCHHHHH
Q 003158 748 SYPSE-CVEKFIKLALKCCQDETDARPSMSEVM 779 (843)
Q Consensus 748 ~~~~~-~~~~l~~l~~~c~~~~p~~RPs~~~vl 779 (843)
..|.+ +++++..++..|++++|.+||++.+++
T Consensus 301 ~lP~~~fS~ef~~FV~~CL~Kdp~~R~s~~qLl 333 (364)
T KOG0581|consen 301 RLPEGEFSPEFRSFVSCCLRKDPSERPSAKQLL 333 (364)
T ss_pred CCCcccCCHHHHHHHHHHhcCCcccCCCHHHHh
Confidence 66665 777777777777766665555444443
No 5
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=9.7e-48 Score=373.16 Aligned_cols=283 Identities=26% Similarity=0.447 Sum_probs=225.3
Q ss_pred cCCCCCCcccccCCeeEEEEEe-CCCcEEEEEEeccCChhh--HHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEEe
Q 003158 511 NNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQG--EKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 587 (843)
Q Consensus 511 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e 587 (843)
.+|...+++|+|.||.||+|+. .+|+.||||+++.....+ .....+|++.|+.++|+||+.++++|.+.+...||+|
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfE 81 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFE 81 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEE
Confidence 4678889999999999999995 579999999998654332 4568899999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCC
Q 003158 588 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 667 (843)
Q Consensus 588 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~ 667 (843)
||+. +|+..++.+ ...+...+++.++.++++|++|||++. |+||||||.|+|++++|.+||+|||+|+.+..++
T Consensus 82 fm~t-dLe~vIkd~-~i~l~pa~iK~y~~m~LkGl~y~H~~~---IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~- 155 (318)
T KOG0659|consen 82 FMPT-DLEVVIKDK-NIILSPADIKSYMLMTLKGLAYCHSKW---ILHRDLKPNNLLISSDGQLKIADFGLARFFGSPN- 155 (318)
T ss_pred eccc-cHHHHhccc-ccccCHHHHHHHHHHHHHHHHHHHhhh---hhcccCCccceEEcCCCcEEeecccchhccCCCC-
Confidence 9964 999999765 457899999999999999999999999 9999999999999999999999999999887554
Q ss_pred CCcccceeeeeecccCCccCchhccc-CCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhccCCC
Q 003158 668 EGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNM 746 (843)
Q Consensus 668 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 746 (843)
...+..+-|.+|+|||.+.| ..|+..+||||.||++.||+-| .||..+++..+++...+. .+
T Consensus 156 ------~~~~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr-~P~fpG~sDidQL~~If~----------~L 218 (318)
T KOG0659|consen 156 ------RIQTHQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLR-VPFFPGDSDIDQLSKIFR----------AL 218 (318)
T ss_pred ------cccccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHcc-CCCCCCCchHHHHHHHHH----------Hc
Confidence 22333467899999999987 5699999999999999999987 677777776776665443 23
Q ss_pred CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH-HhhhhCCCCCCCCCccccCCCCCCCCCCCCCccCCCCCcccC
Q 003158 747 GSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELE-SIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSS 825 (843)
Q Consensus 747 ~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~-~~~~~~~~~~~~~~dll~~~L~~dp~~R~sa~e~L~Hp~f~~ 825 (843)
+.+.++.++++..+ |++.++.+.=. .....++....++.||+.+|+++||.+|+||+|+|+||||++
T Consensus 219 GTP~~~~WP~~~~l------------pdY~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~~yf~~ 286 (318)
T KOG0659|consen 219 GTPTPDQWPEMTSL------------PDYVKIQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALKHPYFKS 286 (318)
T ss_pred CCCCcccCcccccc------------ccHHHHhcCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhcchhhhc
Confidence 33333333333222 12221110000 001145666677789999999999999999999999999997
Q ss_pred CCC
Q 003158 826 DVS 828 (843)
Q Consensus 826 ~~~ 828 (843)
...
T Consensus 287 ~P~ 289 (318)
T KOG0659|consen 287 LPL 289 (318)
T ss_pred CCC
Confidence 443
No 6
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=2.4e-46 Score=403.51 Aligned_cols=261 Identities=38% Similarity=0.582 Sum_probs=222.4
Q ss_pred CCCCCcccccCCeeEEEEEeCCCcEEEEEEeccCChhh--HHHHHHHHHHHHhccCCcccceeeeeecCC-cEEEEEecC
Q 003158 513 FNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQG--EKEFLTEIQFLSRLHHRNLVSLVGYCDEEG-EQMLVYEFM 589 (843)
Q Consensus 513 ~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~-~~~lV~e~~ 589 (843)
+...+.||+|+||+||+|.++....||||++....... .++|.+|+.+|++++|||||+|+|+|.+.. ..++|||||
T Consensus 43 l~~~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtEy~ 122 (362)
T KOG0192|consen 43 LPIEEVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVTEYM 122 (362)
T ss_pred hhhhhhcccCCceeEEEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEEeC
Confidence 33445699999999999999765569999998644333 568999999999999999999999998887 799999999
Q ss_pred CCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCC-cEEEeeccccccCCCCCCC
Q 003158 590 SNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKF-TAKVADFGLSRLAPVPDIE 668 (843)
Q Consensus 590 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~-~~kl~DfGla~~~~~~~~~ 668 (843)
++|+|.++++......+++..++.++.|||+||.|||+++. ||||||||+|||++.++ ++||+|||+++......
T Consensus 123 ~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~~~--iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~~-- 198 (362)
T KOG0192|consen 123 PGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSEGP--IIHRDLKSDNILVDLKGKTLKIADFGLSREKVISK-- 198 (362)
T ss_pred CCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCC--eeecccChhhEEEcCCCCEEEECCCccceeecccc--
Confidence 99999999988656679999999999999999999999874 99999999999999998 99999999998754321
Q ss_pred CcccceeeeeecccCCccCchhcc--cCCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhccCCC
Q 003158 669 GIVPAHVSTVVKGTPGYLDPEYFL--THKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNM 746 (843)
Q Consensus 669 ~~~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 746 (843)
...+...||+.|||||++. ...|+.|+||||||+++|||+||+.||..... .+... ..+..+.+
T Consensus 199 -----~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~-~~~~~--------~v~~~~~R 264 (362)
T KOG0192|consen 199 -----TSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAP-VQVAS--------AVVVGGLR 264 (362)
T ss_pred -----ccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCH-HHHHH--------HHHhcCCC
Confidence 2233467999999999999 56999999999999999999999999987664 22111 12234556
Q ss_pred CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCC
Q 003158 747 GSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPE 791 (843)
Q Consensus 747 ~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~ 791 (843)
+..|..++..+..++..||+.+|..||++.+++..|+.+......
T Consensus 265 p~~p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~~~~~~~~~ 309 (362)
T KOG0192|consen 265 PPIPKECPPHLSSLMERCWLVDPSRRPSFLEIVSRLESIMSHISS 309 (362)
T ss_pred CCCCccCCHHHHHHHHHhCCCCCCcCCCHHHHHHHHHHHHHhhcc
Confidence 677888999999999999999999999999999999998775544
No 7
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=6.4e-47 Score=408.11 Aligned_cols=253 Identities=25% Similarity=0.445 Sum_probs=214.7
Q ss_pred cCCCCCCcccccCCeeEEEEEe-CCCcEEEEEEeccCCh---hhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEE
Q 003158 511 NNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 586 (843)
Q Consensus 511 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~ 586 (843)
.+|...+.||+|||+.||.++. ..|..||+|++.+... ...+.+.+||++.+.++|||||+++++|++.+..|+|.
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivL 97 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVL 97 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEE
Confidence 4688899999999999999997 7899999999986433 23467899999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCC
Q 003158 587 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 666 (843)
Q Consensus 587 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~ 666 (843)
|+|++++|.+++++ ..++++.+++.+..||+.||.|||+++ |||||||..|++++++.++||+|||+|..+..++
T Consensus 98 ELC~~~sL~el~Kr--rk~ltEpEary~l~QIv~GlkYLH~~~---IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~~ 172 (592)
T KOG0575|consen 98 ELCHRGSLMELLKR--RKPLTEPEARYFLRQIVEGLKYLHSLG---IIHRDLKLGNLFLNENMNVKIGDFGLATQLEYDG 172 (592)
T ss_pred EecCCccHHHHHHh--cCCCCcHHHHHHHHHHHHHHHHHHhcC---ceecccchhheeecCcCcEEecccceeeeecCcc
Confidence 99999999999973 457999999999999999999999999 9999999999999999999999999999887542
Q ss_pred CCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhccCCC
Q 003158 667 IEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNM 746 (843)
Q Consensus 667 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 746 (843)
......+|||.|+|||++....++..+||||+||++|.|+.|++||....- .
T Consensus 173 -------Erk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~v-k-------------------- 224 (592)
T KOG0575|consen 173 -------ERKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTV-K-------------------- 224 (592)
T ss_pred -------cccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchH-H--------------------
Confidence 345678899999999999999999999999999999999999999975321 1
Q ss_pred CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCCCCccCCCCCcccC
Q 003158 747 GSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSS 825 (843)
Q Consensus 747 ~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~sa~e~L~Hp~f~~ 825 (843)
+.++ |+..+--.+|+ ..+..+.|||++||+.||.+|||++++|.|+||++
T Consensus 225 ---------ety~----~Ik~~~Y~~P~----------------~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~h~Ff~~ 274 (592)
T KOG0575|consen 225 ---------ETYN----KIKLNEYSMPS----------------HLSAEAKDLIRKLLRPNPSERPSLDEVLDHPFFKS 274 (592)
T ss_pred ---------HHHH----HHHhcCccccc----------------ccCHHHHHHHHHHhcCCcccCCCHHHHhcCHhhhC
Confidence 1111 11111111221 23455668999999999999999999999999933
No 8
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=5.5e-47 Score=405.37 Aligned_cols=265 Identities=30% Similarity=0.494 Sum_probs=225.9
Q ss_pred HHHHHHHHcCCCCCCcccccCCeeEEEEEeCCCcEEEEEEeccCChhhHHHHHHHHHHHHhccCCcccceeeeeecCCcE
Q 003158 503 YGEMALATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQ 582 (843)
Q Consensus 503 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~ 582 (843)
.+.+.+..+.+...+.||+|.||+||.|.++....||+|.++... ...++|.+|+++|++++|++||+++|+|..++.+
T Consensus 198 ~d~wei~r~~l~l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~~-m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~pi 276 (468)
T KOG0197|consen 198 RDPWEIPREELKLIRELGSGQFGEVWLGKWNGSTKVAVKTIKEGS-MSPEAFLREAQIMKKLRHEKLVKLYGVCTKQEPI 276 (468)
T ss_pred cCCeeecHHHHHHHHHhcCCccceEEEEEEcCCCcccceEEeccc-cChhHHHHHHHHHHhCcccCeEEEEEEEecCCce
Confidence 344444455555678999999999999999888899999998753 3456889999999999999999999999998899
Q ss_pred EEEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccC
Q 003158 583 MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLA 662 (843)
Q Consensus 583 ~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~ 662 (843)
+||||||+.|+|.++|+......+...+.+.++.|||+|++||++++ +|||||.++||||+++..+||+|||+|+..
T Consensus 277 yIVtE~m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~~---~IHRDLAARNiLV~~~~~vKIsDFGLAr~~ 353 (468)
T KOG0197|consen 277 YIVTEYMPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESKN---YIHRDLAARNILVDEDLVVKISDFGLARLI 353 (468)
T ss_pred EEEEEecccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhCC---ccchhhhhhheeeccCceEEEccccccccc
Confidence 99999999999999999867778999999999999999999999999 999999999999999999999999999954
Q ss_pred CCCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHh-CCCCCCCCcchHHHHHHHhhcccchhh
Q 003158 663 PVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSV 741 (843)
Q Consensus 663 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~ 741 (843)
....+. ......-...|.|||.+....++.+||||||||+||||+| |+.||....+. +.+..+
T Consensus 354 ~d~~Y~------~~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~----------ev~~~l 417 (468)
T KOG0197|consen 354 GDDEYT------ASEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNE----------EVLELL 417 (468)
T ss_pred CCCcee------ecCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCHH----------HHHHHH
Confidence 433221 1222334568999999999999999999999999999999 99998765431 122234
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhh
Q 003158 742 IDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWN 787 (843)
Q Consensus 742 ~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~ 787 (843)
-.+.+.+.|+.|++.++++|..||+.+|++|||++.+...++++..
T Consensus 418 e~GyRlp~P~~CP~~vY~lM~~CW~~~P~~RPtF~~L~~~l~~~~~ 463 (468)
T KOG0197|consen 418 ERGYRLPRPEGCPDEVYELMKSCWHEDPEDRPTFETLREVLEDFFT 463 (468)
T ss_pred hccCcCCCCCCCCHHHHHHHHHHhhCCcccCCCHHHHHHHHHHhhh
Confidence 4566667899999999999999999999999999999998888754
No 9
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=1e-46 Score=385.20 Aligned_cols=272 Identities=23% Similarity=0.373 Sum_probs=227.3
Q ss_pred HHcCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCChh---hHHHHHHHHHHHHhccCCcccceeeeeecCCcEEE
Q 003158 509 ATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ---GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQML 584 (843)
Q Consensus 509 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~l 584 (843)
..++|++.+.||+|+||+||.++.+ +++.+|+|++++.... ..+...+|..+|.+++||+||+++-.|++.+.+||
T Consensus 23 ~~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLyl 102 (357)
T KOG0598|consen 23 GPDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYL 102 (357)
T ss_pred ChhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEE
Confidence 3567999999999999999999965 6899999999865433 24567899999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCC
Q 003158 585 VYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPV 664 (843)
Q Consensus 585 V~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~ 664 (843)
|+||+.||.|..+|++++ .+++..++-++..|+.||.|||+++ ||||||||+|||+|.+|.++|+|||+++....
T Consensus 103 Vld~~~GGeLf~hL~~eg--~F~E~~arfYlaEi~lAL~~LH~~g---IiyRDlKPENILLd~~GHi~LtDFgL~k~~~~ 177 (357)
T KOG0598|consen 103 VLDYLNGGELFYHLQREG--RFSEDRARFYLAEIVLALGYLHSKG---IIYRDLKPENILLDEQGHIKLTDFGLCKEDLK 177 (357)
T ss_pred EEeccCCccHHHHHHhcC--CcchhHHHHHHHHHHHHHHHHHhCC---eeeccCCHHHeeecCCCcEEEeccccchhccc
Confidence 999999999999997655 4889999999999999999999999 99999999999999999999999999985432
Q ss_pred CCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhccC
Q 003158 665 PDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDG 744 (843)
Q Consensus 665 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 744 (843)
. ...+...+||+.|||||++.+..|+.++|+||+|+++|||++|.+||...+. .+..+
T Consensus 178 ~-------~~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~-~~~~~-------------- 235 (357)
T KOG0598|consen 178 D-------GDATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDV-KKMYD-------------- 235 (357)
T ss_pred C-------CCccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccH-HHHHH--------------
Confidence 2 2234457899999999999999999999999999999999999999975432 11111
Q ss_pred CCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCC-CCCCCCccccCCCCCCCCCCC----CCccCCC
Q 003158 745 NMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPE-SDTKTPEFINSEHTSKEETPP----SSSSMLK 819 (843)
Q Consensus 745 ~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~-~~~~~~dll~~~L~~dp~~R~----sa~e~L~ 819 (843)
-+..+ +++ ..+. .+..+.|+++++|+.||++|. .++++-+
T Consensus 236 ---------------~I~~~------k~~--------------~~p~~ls~~ardll~~LL~rdp~~RLg~~~d~~~ik~ 280 (357)
T KOG0598|consen 236 ---------------KILKG------KLP--------------LPPGYLSEEARDLLKKLLKRDPRQRLGGPGDAEEIKR 280 (357)
T ss_pred ---------------HHhcC------cCC--------------CCCccCCHHHHHHHHHHhccCHHHhcCCCCChHHhhc
Confidence 11100 001 1122 345566888899999999995 6788999
Q ss_pred CCcccCCCCCCccccccCCCCCC
Q 003158 820 HPYVSSDVSGSNLVSGVIPTITP 842 (843)
Q Consensus 820 Hp~f~~~~~~~~~~~~~~~~~~~ 842 (843)
||||.+..+...+.....|+|+|
T Consensus 281 HpfF~~inW~~l~~k~l~PpF~P 303 (357)
T KOG0598|consen 281 HPFFKGINWEKLLAKKLSPPFKP 303 (357)
T ss_pred CcccccCCHHHHHhcCCCCCeec
Confidence 99999999998888889999987
No 10
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.2e-47 Score=394.89 Aligned_cols=287 Identities=22% Similarity=0.348 Sum_probs=232.5
Q ss_pred HHcCCCCCCcccccCCeeEEEEE-eCCCcEEEEEEeccCChhhH-HHHHHHHHHHHhcc-CCcccceeeeeecCC-cEEE
Q 003158 509 ATNNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQEGSLQGE-KEFLTEIQFLSRLH-HRNLVSLVGYCDEEG-EQML 584 (843)
Q Consensus 509 ~~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~-~~~~~E~~~l~~l~-h~nIv~l~~~~~~~~-~~~l 584 (843)
..++|...++||.|.||.||+|+ ...|..||||+++......+ -.=.+|++.|+++. ||||+++.+++.+.+ .+++
T Consensus 8 ~m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~f 87 (538)
T KOG0661|consen 8 FMDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILYF 87 (538)
T ss_pred HHHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEee
Confidence 45789999999999999999999 45799999999986443332 23378999999998 999999999998877 9999
Q ss_pred EEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCC
Q 003158 585 VYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPV 664 (843)
Q Consensus 585 V~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~ 664 (843)
|||||+ .+|+++++++ ...+++..++.|+.||++||+|+|++| +.|||+||+|||+.....+||+|||+|+....
T Consensus 88 VfE~Md-~NLYqLmK~R-~r~fse~~irnim~QilqGL~hiHk~G---fFHRDlKPENiLi~~~~~iKiaDFGLARev~S 162 (538)
T KOG0661|consen 88 VFEFMD-CNLYQLMKDR-NRLFSESDIRNIMYQILQGLAHIHKHG---FFHRDLKPENILISGNDVIKIADFGLAREVRS 162 (538)
T ss_pred eHHhhh-hhHHHHHhhc-CCcCCHHHHHHHHHHHHHHHHHHHhcC---cccccCChhheEecccceeEeccccccccccc
Confidence 999995 5999999887 678999999999999999999999999 99999999999999999999999999997653
Q ss_pred CCCCCcccceeeeeecccCCccCchhccc-CCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhcc
Q 003158 665 PDIEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVID 743 (843)
Q Consensus 665 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 743 (843)
....+..+.|.+|+|||++.. .-|+.+.||||+||+++|+.+-++.|. +.+..++..++.+
T Consensus 163 --------kpPYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFP-G~sE~Dqi~KIc~--------- 224 (538)
T KOG0661|consen 163 --------KPPYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFP-GASEIDQIYKICE--------- 224 (538)
T ss_pred --------CCCcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCC-CCcHHHHHHHHHH---------
Confidence 334577789999999999975 678999999999999999999876665 4445555544321
Q ss_pred CCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCCCCccCCCCCcc
Q 003158 744 GNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYV 823 (843)
Q Consensus 744 ~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~sa~e~L~Hp~f 823 (843)
.++.+..+.+.+-.+++..+=-.-|..-|+- +...++....++.++|.+|+.|||.+||||+|+|+||||
T Consensus 225 -VLGtP~~~~~~eg~~La~~mnf~~P~~~~~~---------l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~pff 294 (538)
T KOG0661|consen 225 -VLGTPDKDSWPEGYNLASAMNFRFPQVKPSP---------LKDLLPNASSEAASLIERLLAWDPDKRPTASQALQHPFF 294 (538)
T ss_pred -HhCCCccccchhHHHHHHHhccCCCcCCCCC---------hHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcCccc
Confidence 1233334444444566666555555555532 122345667778899999999999999999999999999
Q ss_pred cCCCC
Q 003158 824 SSDVS 828 (843)
Q Consensus 824 ~~~~~ 828 (843)
+....
T Consensus 295 q~~~~ 299 (538)
T KOG0661|consen 295 QVGRA 299 (538)
T ss_pred ccccc
Confidence 76554
No 11
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=2.8e-45 Score=377.20 Aligned_cols=271 Identities=24% Similarity=0.395 Sum_probs=213.4
Q ss_pred HcCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccC--ChhhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEE
Q 003158 510 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEG--SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 586 (843)
Q Consensus 510 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~ 586 (843)
..+|...+.||+|+||+||+|+++ ++..||||.+... .....+.+..|+++|+.++|||||.+++++..++..||||
T Consensus 9 ~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lVM 88 (429)
T KOG0595|consen 9 VGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLVM 88 (429)
T ss_pred cccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEEE
Confidence 357888889999999999999965 6899999999876 4445667889999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCC------CcEEEeeccccc
Q 003158 587 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHK------FTAKVADFGLSR 660 (843)
Q Consensus 587 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~------~~~kl~DfGla~ 660 (843)
|||.||+|.+|++.++ .+++..++.++.|+|.||++||+++ ||||||||.|||++.. -.+||+|||+|+
T Consensus 89 EyC~gGDLs~yi~~~~--~l~e~t~r~Fm~QLA~alq~L~~~~---IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR 163 (429)
T KOG0595|consen 89 EYCNGGDLSDYIRRRG--RLPEATARHFMQQLASALQFLHENN---IIHRDLKPQNILLSTTARNDTSPVLKIADFGFAR 163 (429)
T ss_pred EeCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCCcceEEeccCCCCCCCceEEecccchhh
Confidence 9999999999998765 4899999999999999999999999 9999999999999865 468999999999
Q ss_pred cCCCCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchh
Q 003158 661 LAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFS 740 (843)
Q Consensus 661 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~ 740 (843)
.+.. .......+|++-|||||+++.++|+.|+|+||+|+++|+|++|+.||...... +... .+.
T Consensus 164 ~L~~--------~~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~-eL~~-~~~------ 227 (429)
T KOG0595|consen 164 FLQP--------GSMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAETPK-ELLL-YIK------ 227 (429)
T ss_pred hCCc--------hhHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccCHH-HHHH-HHh------
Confidence 8863 33345678999999999999999999999999999999999999999754421 1111 111
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCCCCccCCCC
Q 003158 741 VIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKH 820 (843)
Q Consensus 741 ~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~sa~e~L~H 820 (843)
.-....+.++........++...-++.++.+|-.+.+ .|...++..+|.+|..+.++-.+
T Consensus 228 k~~~~~~~~~~~~s~~~~~Ll~~ll~~~~~~~~~~~~--------------------~~~~~~l~~~p~~~~~~~~~~~~ 287 (429)
T KOG0595|consen 228 KGNEIVPVLPAELSNPLRELLISLLQRNPKDRISFED--------------------FFDHPFLAANPQDRADAFELESR 287 (429)
T ss_pred ccccccCchhhhccCchhhhhhHHHhcCccccCchHH--------------------hhhhhhcccCcccccCccccccc
Confidence 0111122334444555556666666667666655543 24455566666666665544433
Q ss_pred C
Q 003158 821 P 821 (843)
Q Consensus 821 p 821 (843)
.
T Consensus 288 ~ 288 (429)
T KOG0595|consen 288 T 288 (429)
T ss_pred c
Confidence 3
No 12
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=1.5e-46 Score=370.38 Aligned_cols=280 Identities=24% Similarity=0.368 Sum_probs=218.1
Q ss_pred cCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCCh--hhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEEe
Q 003158 511 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 587 (843)
Q Consensus 511 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e 587 (843)
+.|+...++|+|+||+|||++.+ +|+.||||++..... .-.+-..+|+++|++++|+|+|.++++|.....++||+|
T Consensus 2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE 81 (396)
T KOG0593|consen 2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFE 81 (396)
T ss_pred cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEee
Confidence 46888899999999999999965 599999999986433 224667899999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCC
Q 003158 588 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 667 (843)
Q Consensus 588 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~ 667 (843)
||+. ++-+-+.+. ...++...+.+++.|+++|+.|+|+++ +|||||||+|||++.+|.+||||||.|+.+..+
T Consensus 82 ~~dh-TvL~eLe~~-p~G~~~~~vk~~l~Q~l~ai~~cHk~n---~IHRDIKPENILit~~gvvKLCDFGFAR~L~~p-- 154 (396)
T KOG0593|consen 82 YCDH-TVLHELERY-PNGVPSELVKKYLYQLLKAIHFCHKNN---CIHRDIKPENILITQNGVVKLCDFGFARTLSAP-- 154 (396)
T ss_pred ecch-HHHHHHHhc-cCCCCHHHHHHHHHHHHHHhhhhhhcC---eecccCChhheEEecCCcEEeccchhhHhhcCC--
Confidence 9976 554555443 345888999999999999999999999 999999999999999999999999999987632
Q ss_pred CCcccceeeeeecccCCccCchhccc-CCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhccCCC
Q 003158 668 EGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNM 746 (843)
Q Consensus 668 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 746 (843)
....+..+.|.+|+|||.+.+ .+|+.++||||.||++.||++|.+.|.+.. ..+++..+. ..+
T Consensus 155 -----gd~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~S-DiDQLy~I~----------ktL 218 (396)
T KOG0593|consen 155 -----GDNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRS-DIDQLYLIR----------KTL 218 (396)
T ss_pred -----cchhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcc-hHHHHHHHH----------HHH
Confidence 344567788999999999998 789999999999999999999976665444 444443221 111
Q ss_pred CCCCHHHHHHHHHHHHHhcccCCCC---C-CCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCCCCccCCCCCc
Q 003158 747 GSYPSECVEKFIKLALKCCQDETDA---R-PSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPY 822 (843)
Q Consensus 747 ~~~~~~~~~~l~~l~~~c~~~~p~~---R-Ps~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~sa~e~L~Hp~ 822 (843)
+...+ +..++ +..+|-- | |.. +.++.+...+|.....+.||++.+|..||++|++.+|+|.|||
T Consensus 219 G~L~p----rhq~i----F~~N~~F~Gv~lP~~----~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~H~y 286 (396)
T KOG0593|consen 219 GNLIP----RHQSI----FSSNPFFHGVRLPEP----EHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLHHPY 286 (396)
T ss_pred cccCH----HHHHH----hccCCceeeeecCCC----CCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhcChH
Confidence 11111 11111 1112210 0 111 1223344566777777889999999999999999999999999
Q ss_pred ccC
Q 003158 823 VSS 825 (843)
Q Consensus 823 f~~ 825 (843)
|.+
T Consensus 287 Fd~ 289 (396)
T KOG0593|consen 287 FDG 289 (396)
T ss_pred HHH
Confidence 943
No 13
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.4e-45 Score=387.54 Aligned_cols=287 Identities=25% Similarity=0.374 Sum_probs=222.0
Q ss_pred HcCCCCCCcccccCCeeEEEEE-eCCCcEEEEEEeccCC--hhhHHHHHHHHHHHHhccCCcccceeeeeecC--CcEEE
Q 003158 510 TNNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE--GEQML 584 (843)
Q Consensus 510 ~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~--~~~~l 584 (843)
.+.|+.+++||+|.||.||+|+ ..+|+.||+|++..+. .....-..+||.+|+++.||||+++.+...+. +.+||
T Consensus 116 ~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYl 195 (560)
T KOG0600|consen 116 ADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYL 195 (560)
T ss_pred hHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEE
Confidence 4567778899999999999999 4689999999987654 33346678999999999999999999998765 78999
Q ss_pred EEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCC
Q 003158 585 VYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPV 664 (843)
Q Consensus 585 V~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~ 664 (843)
|+|||++ +|.-++... .-.+++.+++.++.|++.||+|+|+++ |+|||||.+|||+|.+|.+||+|||+|+++..
T Consensus 196 VFeYMdh-DL~GLl~~p-~vkft~~qIKc~mkQLl~Gl~~cH~~g---vlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~ 270 (560)
T KOG0600|consen 196 VFEYMDH-DLSGLLSSP-GVKFTEPQIKCYMKQLLEGLEYCHSRG---VLHRDIKGSNILIDNNGVLKIADFGLARFYTP 270 (560)
T ss_pred EEecccc-hhhhhhcCC-CcccChHHHHHHHHHHHHHHHHHhhcC---eeeccccccceEEcCCCCEEeccccceeeccC
Confidence 9999976 888887543 346999999999999999999999999 99999999999999999999999999998764
Q ss_pred CCCCCcccceeeeeecccCCccCchhccc-CCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhcc
Q 003158 665 PDIEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVID 743 (843)
Q Consensus 665 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 743 (843)
.. ....+..+.|.+|+|||.+.+ ..|+.++|+||.||||.||++|++.|.. ....+++..++..
T Consensus 271 ~~------~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G-~tEveQl~kIfkl-------- 335 (560)
T KOG0600|consen 271 SG------SAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQG-RTEVEQLHKIFKL-------- 335 (560)
T ss_pred CC------CcccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCC-ccHHHHHHHHHHH--------
Confidence 43 233566778999999999998 5699999999999999999999777654 4455555544321
Q ss_pred CCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCCCCccCCCCCcc
Q 003158 744 GNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYV 823 (843)
Q Consensus 744 ~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~sa~e~L~Hp~f 823 (843)
.+.+.+++|. ..++- .+....| ..+.... +.. .+...+..+.+|+..||.+||.+|.||+++|+|+||
T Consensus 336 --cGSP~e~~W~-~~kLP-~~~~~kp--~~~y~r~---l~E---~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~seyF 403 (560)
T KOG0600|consen 336 --CGSPTEDYWP-VSKLP-HATIFKP--QQPYKRR---LRE---TFKDFPASALDLLEKLLSLDPDKRGTASSALQSEYF 403 (560)
T ss_pred --hCCCChhccc-cccCC-cccccCC--CCcccch---HHH---HhccCCHHHHHHHHHHhccCccccccHHHHhcCccc
Confidence 2334444444 22221 0111111 1111111 111 233445667799999999999999999999999999
Q ss_pred cCCCC
Q 003158 824 SSDVS 828 (843)
Q Consensus 824 ~~~~~ 828 (843)
..+..
T Consensus 404 ~t~p~ 408 (560)
T KOG0600|consen 404 TTEPL 408 (560)
T ss_pred ccCCC
Confidence 65544
No 14
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.5e-45 Score=359.90 Aligned_cols=257 Identities=27% Similarity=0.444 Sum_probs=214.8
Q ss_pred cCCCCCCcccccCCeeEEEEE-eCCCcEEEEEEeccCCh--hhHHHHHHHHHHHHhccCCcccceee-eeecCCc-EEEE
Q 003158 511 NNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVG-YCDEEGE-QMLV 585 (843)
Q Consensus 511 ~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~nIv~l~~-~~~~~~~-~~lV 585 (843)
.+|++.++||+|.||+|||+. ..+|..||.|.++-+.. ...++...|+.+|++++|||||++++ .+.++.+ ++||
T Consensus 19 ~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlniv 98 (375)
T KOG0591|consen 19 ADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNIV 98 (375)
T ss_pred HHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHHH
Confidence 457788999999999999998 56899999999885433 33567899999999999999999999 4555554 8999
Q ss_pred EecCCCCCHHHHHhh--cCCCCcchhHHHHHHHHHHHHHHHHhcCC-CCCEEeccCCCCcEEEcCCCcEEEeeccccccC
Q 003158 586 YEFMSNGTLRDQLSA--KSKEPLGFAMRLSIALGSSRGILYLHTEA-DPPVFHRDIKASNILLDHKFTAKVADFGLSRLA 662 (843)
Q Consensus 586 ~e~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~~ia~aL~yLH~~~-~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~ 662 (843)
||||..|+|..+++. +.+..+++..+|++..|++.||.++|+.- ...|+||||||.||+++.+|.|||+|||+++++
T Consensus 99 mE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~l 178 (375)
T KOG0591|consen 99 MELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLGRFL 178 (375)
T ss_pred HHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchhHhHh
Confidence 999999999999975 44567999999999999999999999832 123999999999999999999999999999988
Q ss_pred CCCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhc
Q 003158 663 PVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVI 742 (843)
Q Consensus 663 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 742 (843)
... .......+|||.||+||.+.+.+|+.+|||||+||++|||+.-++||.+. +....- ..+.
T Consensus 179 ~s~-------~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~-n~~~L~---------~KI~ 241 (375)
T KOG0591|consen 179 SSK-------TTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGD-NLLSLC---------KKIE 241 (375)
T ss_pred cch-------hHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccc-cHHHHH---------HHHH
Confidence 643 23345678999999999999999999999999999999999999999866 332221 1344
Q ss_pred cCCCCCCC-HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 003158 743 DGNMGSYP-SECVEKFIKLALKCCQDETDARPSMSEVMRELES 784 (843)
Q Consensus 743 ~~~~~~~~-~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~ 784 (843)
.+..++.| +.++.++.+++..|+..||+.||+.-.+++.++.
T Consensus 242 qgd~~~~p~~~YS~~l~~li~~ci~vd~~~RP~t~~~v~di~~ 284 (375)
T KOG0591|consen 242 QGDYPPLPDEHYSTDLRELINMCIAVDPEQRPDTVPYVQDIQS 284 (375)
T ss_pred cCCCCCCcHHHhhhHHHHHHHHHccCCcccCCCcchHHHHHHH
Confidence 45566666 7789999999999999999999997666555554
No 15
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=3.3e-45 Score=365.78 Aligned_cols=286 Identities=24% Similarity=0.335 Sum_probs=218.9
Q ss_pred cCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCChhh--HHHHHHHHHHHHhccCCcccceeeeeec--CCcEEEE
Q 003158 511 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQG--EKEFLTEIQFLSRLHHRNLVSLVGYCDE--EGEQMLV 585 (843)
Q Consensus 511 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~nIv~l~~~~~~--~~~~~lV 585 (843)
+.|+.+++|++|+||.||+|+++ +++.||+|+++...... .-...+||.+|.+++|||||.+..+... -+.+|+|
T Consensus 76 ~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy~V 155 (419)
T KOG0663|consen 76 EEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIYIV 155 (419)
T ss_pred HHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceeeee
Confidence 46778899999999999999964 78999999998543211 2346899999999999999999988743 4579999
Q ss_pred EecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCC
Q 003158 586 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVP 665 (843)
Q Consensus 586 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~ 665 (843)
||||+. +|..+++.-. +++...+++.+..|+++|++|||... |+|||||++|+|++..|.+||+|||+|+.+..+
T Consensus 156 Me~~Eh-DLksl~d~m~-q~F~~~evK~L~~QlL~glk~lH~~w---ilHRDLK~SNLLm~~~G~lKiaDFGLAR~ygsp 230 (419)
T KOG0663|consen 156 MEYVEH-DLKSLMETMK-QPFLPGEVKTLMLQLLRGLKHLHDNW---ILHRDLKTSNLLLSHKGILKIADFGLAREYGSP 230 (419)
T ss_pred HHHHHh-hHHHHHHhcc-CCCchHHHHHHHHHHHHHHHHHhhce---eEecccchhheeeccCCcEEecccchhhhhcCC
Confidence 999976 9999997654 67999999999999999999999999 999999999999999999999999999987654
Q ss_pred CCCCcccceeeeeecccCCccCchhccc-CCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhccC
Q 003158 666 DIEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDG 744 (843)
Q Consensus 666 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 744 (843)
....+..+.|.+|+|||.+.+ ..|+++.|+||+||++.||+++++.|.+ ....+++..+++.
T Consensus 231 -------~k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G-~sE~dQl~~If~l--------- 293 (419)
T KOG0663|consen 231 -------LKPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPG-KSEIDQLDKIFKL--------- 293 (419)
T ss_pred -------cccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCC-CchHHHHHHHHHH---------
Confidence 234566778999999999998 5699999999999999999999766654 4455566555432
Q ss_pred CCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCC--CCCCCCccccCCCCCCCCCCCCCccCCCCCc
Q 003158 745 NMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPE--SDTKTPEFINSEHTSKEETPPSSSSMLKHPY 822 (843)
Q Consensus 745 ~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~--~~~~~~dll~~~L~~dp~~R~sa~e~L~Hp~ 822 (843)
++.+.+..++.+.++-. ++ -..+|... ...|+. .++. .+....||++.+|++||++|+||+|+|+|+|
T Consensus 294 -lGtPte~iwpg~~~lp~--~k--~~~f~~~p--yn~lr~---kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~h~~ 363 (419)
T KOG0663|consen 294 -LGTPSEAIWPGYSELPA--VK--KMTFSEHP--YNNLRK---KFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLKHEY 363 (419)
T ss_pred -hCCCccccCCCccccch--hh--ccccCCCC--chhhhh---hccccccchhHHHHHHHHhccCccccccHHHhhcccc
Confidence 12222222222222110 00 00111110 112222 2333 3367789999999999999999999999999
Q ss_pred ccCCCC
Q 003158 823 VSSDVS 828 (843)
Q Consensus 823 f~~~~~ 828 (843)
|.....
T Consensus 364 F~e~P~ 369 (419)
T KOG0663|consen 364 FRETPL 369 (419)
T ss_pred cccCCC
Confidence 988443
No 16
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-44 Score=355.71 Aligned_cols=267 Identities=22% Similarity=0.355 Sum_probs=221.7
Q ss_pred cCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCChhhH---HHHHHHHHHHHhccCCcccceeeeeecCCcEEEEE
Q 003158 511 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGE---KEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 586 (843)
Q Consensus 511 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~---~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~ 586 (843)
++|+..+.||.|+||+|..++.+ +|..+|+|+++....-.. +...+|..+|+.+.||+++++++.|.+.+..++||
T Consensus 44 ~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymvm 123 (355)
T KOG0616|consen 44 QDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMVM 123 (355)
T ss_pred hhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEEEE
Confidence 46788899999999999999964 689999999987654443 45678999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCC
Q 003158 587 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 666 (843)
Q Consensus 587 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~ 666 (843)
||++||.|..++++.+ .+++..++.+|.||+.||+|||+.+ |++|||||+|||+|.+|.+||+|||.|+...
T Consensus 124 eyv~GGElFS~Lrk~~--rF~e~~arFYAAeivlAleylH~~~---iiYRDLKPENiLlD~~G~iKitDFGFAK~v~--- 195 (355)
T KOG0616|consen 124 EYVPGGELFSYLRKSG--RFSEPHARFYAAEIVLALEYLHSLD---IIYRDLKPENLLLDQNGHIKITDFGFAKRVS--- 195 (355)
T ss_pred eccCCccHHHHHHhcC--CCCchhHHHHHHHHHHHHHHHHhcC---eeeccCChHHeeeccCCcEEEEeccceEEec---
Confidence 9999999999997644 5899999999999999999999999 9999999999999999999999999998764
Q ss_pred CCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhccCCC
Q 003158 667 IEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNM 746 (843)
Q Consensus 667 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 746 (843)
..+...+|||.|+|||++.+..++.++|.|||||++|||+.|.+||...... +..+ .++.+ .
T Consensus 196 -------~rT~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~~-~iY~---------KI~~~-~ 257 (355)
T KOG0616|consen 196 -------GRTWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNPI-QIYE---------KILEG-K 257 (355)
T ss_pred -------CcEEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCChH-HHHH---------HHHhC-c
Confidence 2356789999999999999999999999999999999999999999865431 1111 11111 1
Q ss_pred CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCC-----CCCccCCCCC
Q 003158 747 GSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETP-----PSSSSMLKHP 821 (843)
Q Consensus 747 ~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R-----~sa~e~L~Hp 821 (843)
..+|. .-+.++.||++++|+.|-.+| .-.+++.+||
T Consensus 258 v~fP~---------------------------------------~fs~~~kdLl~~LL~vD~t~R~gnlknG~~dIk~H~ 298 (355)
T KOG0616|consen 258 VKFPS---------------------------------------YFSSDAKDLLKKLLQVDLTKRFGNLKNGVEDIKNHP 298 (355)
T ss_pred ccCCc---------------------------------------ccCHHHHHHHHHHHhhhhHhhhcCcCCCccccccCc
Confidence 11222 233444566667777777777 3578899999
Q ss_pred cccCCCCCCccccccCCCCCC
Q 003158 822 YVSSDVSGSNLVSGVIPTITP 842 (843)
Q Consensus 822 ~f~~~~~~~~~~~~~~~~~~~ 842 (843)
||.+-.+..-..+.+.||+.|
T Consensus 299 wF~~v~W~~i~~r~ie~P~~p 319 (355)
T KOG0616|consen 299 WFKGVDWEAILQRKIEPPFEP 319 (355)
T ss_pred ccccccHHHHhhccccCCCCC
Confidence 999999987777887777766
No 17
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.1e-45 Score=369.68 Aligned_cols=286 Identities=23% Similarity=0.366 Sum_probs=226.5
Q ss_pred HHcCCCCCCcccccCCeeEEEEEe-CCCcEEEEEEecc--CChhhHHHHHHHHHHHHhccCCcccceeeeeec-----CC
Q 003158 509 ATNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQE--GSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDE-----EG 580 (843)
Q Consensus 509 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~--~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~-----~~ 580 (843)
....|...+.||+|+||.|++|.. .+|+.||||++.. ......++..+|+++|+.++|+||+.+.+.+.. -.
T Consensus 20 i~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~ 99 (359)
T KOG0660|consen 20 IPRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFN 99 (359)
T ss_pred ccceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccc
Confidence 345666678999999999999995 4799999999873 344556889999999999999999999999854 35
Q ss_pred cEEEEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccc
Q 003158 581 EQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSR 660 (843)
Q Consensus 581 ~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~ 660 (843)
..|+|+|+| .-+|...++.+ +.+....+..+..|+++||+|+|+.+ |+||||||+|++++.+..+||+|||+|+
T Consensus 100 DvYiV~elM-etDL~~iik~~--~~L~d~H~q~f~YQiLrgLKyiHSAn---ViHRDLKPsNll~n~~c~lKI~DFGLAR 173 (359)
T KOG0660|consen 100 DVYLVFELM-ETDLHQIIKSQ--QDLTDDHAQYFLYQILRGLKYIHSAN---VIHRDLKPSNLLLNADCDLKICDFGLAR 173 (359)
T ss_pred eeEEehhHH-hhHHHHHHHcC--ccccHHHHHHHHHHHHHhcchhhccc---ccccccchhheeeccCCCEEecccccee
Confidence 789999999 56999999654 34899999999999999999999999 9999999999999999999999999999
Q ss_pred cCCCCCCCCcccceeeeeecccCCccCchhccc-CCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccch
Q 003158 661 LAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMF 739 (843)
Q Consensus 661 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~ 739 (843)
..... ......+....|.+|+|||++.. .+|+.+.||||.||++.||++|+..|.+.+ ...++...
T Consensus 174 ~~~~~-----~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d-~v~Ql~lI------- 240 (359)
T KOG0660|consen 174 YLDKF-----FEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKD-YVHQLQLI------- 240 (359)
T ss_pred ecccc-----CcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCc-hHHHHHHH-------
Confidence 87543 11334567788999999999975 689999999999999999999988776544 44444322
Q ss_pred hhccCCCCCCCHHHHHHHH-HHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCCCCccCC
Q 003158 740 SVIDGNMGSYPSECVEKFI-KLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSML 818 (843)
Q Consensus 740 ~~~~~~~~~~~~~~~~~l~-~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~sa~e~L 818 (843)
-...+.++++....+. +-+..-++..|...+. .+.+.+|..++.+.||+.+||++||.+|+||+|||
T Consensus 241 ---~~~lGtP~~e~l~~i~s~~ar~yi~slp~~p~~---------~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL 308 (359)
T KOG0660|consen 241 ---LELLGTPSEEDLQKIRSEKARPYIKSLPQIPKQ---------PFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEAL 308 (359)
T ss_pred ---HHhcCCCCHHHHHHhccHHHHHHHHhCCCCCCC---------CHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHh
Confidence 2234444555544443 1222233333332221 12345688899999999999999999999999999
Q ss_pred CCCcccC
Q 003158 819 KHPYVSS 825 (843)
Q Consensus 819 ~Hp~f~~ 825 (843)
+|||++.
T Consensus 309 ~hPYl~~ 315 (359)
T KOG0660|consen 309 AHPYLAP 315 (359)
T ss_pred cChhhhh
Confidence 9999965
No 18
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=1.6e-44 Score=404.37 Aligned_cols=264 Identities=30% Similarity=0.507 Sum_probs=225.4
Q ss_pred HHcCCCCCCcccccCCeeEEEEEeC------CCcEEEEEEeccCChh-hHHHHHHHHHHHHhccCCcccceeeeeecCCc
Q 003158 509 ATNNFNSSTQIGQGGYGKVYKGILP------DGTVVAVKRAQEGSLQ-GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGE 581 (843)
Q Consensus 509 ~~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~ 581 (843)
...+....+.||+|+||+||+|+.. +...||||.++..... ..++|++|++++..++|||||+|+|+|.+++.
T Consensus 484 ~r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~P 563 (774)
T KOG1026|consen 484 PRSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCREGDP 563 (774)
T ss_pred chhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCCe
Confidence 3445556788999999999999853 3568999999986655 67899999999999999999999999999999
Q ss_pred EEEEEecCCCCCHHHHHhhcC------------CCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCC
Q 003158 582 QMLVYEFMSNGTLRDQLSAKS------------KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKF 649 (843)
Q Consensus 582 ~~lV~e~~~~gsL~~~l~~~~------------~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~ 649 (843)
+++|+|||..|||.++|.... +.+++..+.+.||.|||.|++||-++. +|||||..+|+||.++.
T Consensus 564 ~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~---FVHRDLATRNCLVge~l 640 (774)
T KOG1026|consen 564 LCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHH---FVHRDLATRNCLVGENL 640 (774)
T ss_pred eEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCc---ccccchhhhhceeccce
Confidence 999999999999999997532 224889999999999999999999999 99999999999999999
Q ss_pred cEEEeeccccccCCCCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHh-CCCCCCCCcchHHH
Q 003158 650 TAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVRE 728 (843)
Q Consensus 650 ~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~ellt-g~~pf~~~~~~~~~ 728 (843)
.|||+|||+++..-..|++... ....-..+|||||.++.+++|.+||||||||+|||+++ |+.||..-.+.
T Consensus 641 ~VKIsDfGLsRdiYssDYYk~~-----~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~--- 712 (774)
T KOG1026|consen 641 VVKISDFGLSRDIYSSDYYKVR-----GNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQ--- 712 (774)
T ss_pred EEEecccccchhhhhhhhhccc-----CCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccchH---
Confidence 9999999999977665544321 12223578999999999999999999999999999999 99999876542
Q ss_pred HHHHhhcccchhhccCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCC
Q 003158 729 VNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMP 790 (843)
Q Consensus 729 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~ 790 (843)
+.+..+-.+...+.|+.|+.+++++|..||+.+|.+||+++||-..|+++....+
T Consensus 713 -------EVIe~i~~g~lL~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~~~~s~ 767 (774)
T KOG1026|consen 713 -------EVIECIRAGQLLSCPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAWAQASP 767 (774)
T ss_pred -------HHHHHHHcCCcccCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHHHhcCc
Confidence 1222344555667899999999999999999999999999999999999866443
No 19
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=8.2e-44 Score=377.22 Aligned_cols=270 Identities=21% Similarity=0.309 Sum_probs=218.9
Q ss_pred HcCCCCCCcccccCCeeEEEEEe-CCCcEEEEEEeccCChhh---HHHHHHHHHHHHhc-cCCcccceeeeeecCCcEEE
Q 003158 510 TNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQG---EKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQML 584 (843)
Q Consensus 510 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~l 584 (843)
.++|...+.||.|+|++|++|+. ..++.||||++.+..... .+.+..|-.+|.+| .||.|++|+-.|.++..+|+
T Consensus 72 ~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sLYF 151 (604)
T KOG0592|consen 72 PNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESLYF 151 (604)
T ss_pred hhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccceEE
Confidence 35677788999999999999995 469999999998654333 35677899999999 89999999999999999999
Q ss_pred EEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCC
Q 003158 585 VYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPV 664 (843)
Q Consensus 585 V~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~ 664 (843)
|+||+++|+|.++|++.+ .+++...+.++.+|+.||+|||++| ||||||||+|||+|++|++||+|||.|+.+..
T Consensus 152 vLe~A~nGdll~~i~K~G--sfde~caR~YAAeIldAleylH~~G---IIHRDlKPENILLd~dmhikITDFGsAK~l~~ 226 (604)
T KOG0592|consen 152 VLEYAPNGDLLDLIKKYG--SFDETCARFYAAEILDALEYLHSNG---IIHRDLKPENILLDKDGHIKITDFGSAKILSP 226 (604)
T ss_pred EEEecCCCcHHHHHHHhC--cchHHHHHHHHHHHHHHHHHHHhcC---ceeccCChhheeEcCCCcEEEeeccccccCCh
Confidence 999999999999998764 5899999999999999999999999 99999999999999999999999999998864
Q ss_pred CCCCC-----c-ccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccc
Q 003158 665 PDIEG-----I-VPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMM 738 (843)
Q Consensus 665 ~~~~~-----~-~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~ 738 (843)
..... . .........+||..|.+||++.....++.+|+|+|||++|.|+.|.+||....+..
T Consensus 227 ~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~Neyl------------ 294 (604)
T KOG0592|consen 227 SQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANEYL------------ 294 (604)
T ss_pred hhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccHHH------------
Confidence 43220 0 01111245789999999999999999999999999999999999999997654311
Q ss_pred hhhccCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCCCCccCC
Q 003158 739 FSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSML 818 (843)
Q Consensus 739 ~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~sa~e~L 818 (843)
-+.+++..-.. ..+...+.+.||++++|..||.+|+|++|+.
T Consensus 295 -----------------iFqkI~~l~y~---------------------fp~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk 336 (604)
T KOG0592|consen 295 -----------------IFQKIQALDYE---------------------FPEGFPEDARDLIKKLLVRDPSDRLTSQQIK 336 (604)
T ss_pred -----------------HHHHHHHhccc---------------------CCCCCCHHHHHHHHHHHccCccccccHHHHh
Confidence 11111111110 1111223345788889999999999999999
Q ss_pred CCCcccCCCCCCcccc
Q 003158 819 KHPYVSSDVSGSNLVS 834 (843)
Q Consensus 819 ~Hp~f~~~~~~~~~~~ 834 (843)
+||||.+..+...|..
T Consensus 337 ~HpFF~~Vdw~nlw~~ 352 (604)
T KOG0592|consen 337 AHPFFEGVDWENLWQQ 352 (604)
T ss_pred hCcccccCChhhhhhc
Confidence 9999999888664443
No 20
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-42 Score=359.13 Aligned_cols=209 Identities=29% Similarity=0.385 Sum_probs=183.5
Q ss_pred HHcCCCCCCcccccCCeeEEEEE-eCCCcEEEEEEeccCChhh-HHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEE
Q 003158 509 ATNNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQEGSLQG-EKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 586 (843)
Q Consensus 509 ~~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~ 586 (843)
..+.|+..+.||.|..++||+|+ .+.+..||||++..+.... .+.+.+|+..|+.++||||++++..|..+..+|+||
T Consensus 24 n~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvVm 103 (516)
T KOG0582|consen 24 NAKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVVM 103 (516)
T ss_pred CccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEee
Confidence 34678999999999999999999 5678999999998654433 478999999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCC
Q 003158 587 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 666 (843)
Q Consensus 587 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~ 666 (843)
.||.+|++.+++...-...+++..+..|.+++++||.|||++| .||||||+.|||++++|.|||+|||.+..+....
T Consensus 104 pfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~G---~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~G 180 (516)
T KOG0582|consen 104 PFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQNG---HIHRDVKAGNILIDSDGTVKLADFGVSASLFDSG 180 (516)
T ss_pred hhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhcC---ceecccccccEEEcCCCcEEEcCceeeeeecccC
Confidence 9999999999998877777999999999999999999999999 9999999999999999999999999886654322
Q ss_pred CCCcccceeeeeecccCCccCchhccc--CCCCchhhhHHHHHHHHHHHhCCCCCCCCc
Q 003158 667 IEGIVPAHVSTVVKGTPGYLDPEYFLT--HKLTDKSDVYSLGVVFLELLTGMQPISHGK 723 (843)
Q Consensus 667 ~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~sDvwS~G~~l~elltg~~pf~~~~ 723 (843)
...........||+.|||||+++. ..|+.|+||||||++..||.+|+.||..-.
T Consensus 181 ---~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~p 236 (516)
T KOG0582|consen 181 ---DRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYP 236 (516)
T ss_pred ---ceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCC
Confidence 111112256789999999999654 579999999999999999999999997544
No 21
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.1e-43 Score=376.70 Aligned_cols=258 Identities=24% Similarity=0.423 Sum_probs=214.1
Q ss_pred cCCCCCCcccccCCeeEEEEE-eCCCcEEEEEEeccCChhhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEEecC
Q 003158 511 NNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFM 589 (843)
Q Consensus 511 ~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e~~ 589 (843)
..|....+||+|+.|.||.|. ..+++.||||++........+-+.+|+.+|+..+|+|||.+++.|...+++|+|||||
T Consensus 273 ~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVMEym 352 (550)
T KOG0578|consen 273 SKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVMEYM 352 (550)
T ss_pred hhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEeec
Confidence 467777899999999999999 4578999999998766666677899999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCCCC
Q 003158 590 SNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEG 669 (843)
Q Consensus 590 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~ 669 (843)
+||+|.|.+... .+++.++..|++++++||+|||.++ |+|||||.+|||++.+|.+||+|||++..+....
T Consensus 353 ~ggsLTDvVt~~---~~~E~qIA~Icre~l~aL~fLH~~g---IiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~--- 423 (550)
T KOG0578|consen 353 EGGSLTDVVTKT---RMTEGQIAAICREILQGLKFLHARG---IIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQ--- 423 (550)
T ss_pred CCCchhhhhhcc---cccHHHHHHHHHHHHHHHHHHHhcc---eeeeccccceeEeccCCcEEEeeeeeeecccccc---
Confidence 999999998543 3899999999999999999999999 9999999999999999999999999998765432
Q ss_pred cccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhccCCCCCC
Q 003158 670 IVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSY 749 (843)
Q Consensus 670 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 749 (843)
.......||+.|||||++....|+++.||||||++++||+.|.+||.....+.. +.. +....
T Consensus 424 ----~KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrA-lyL---------Ia~ng---- 485 (550)
T KOG0578|consen 424 ----SKRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRA-LYL---------IATNG---- 485 (550)
T ss_pred ----CccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCChHHH-HHH---------HhhcC----
Confidence 134667899999999999999999999999999999999999999986443211 111 11111
Q ss_pred CHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCCCCccCCCCCcccCCCC
Q 003158 750 PSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSSDVS 828 (843)
Q Consensus 750 ~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~sa~e~L~Hp~f~~~~~ 828 (843)
+|.. +..+..++.+.|||.+||+.|+++|++|.|+|+||||..-..
T Consensus 486 ----------------------~P~l-----------k~~~klS~~~kdFL~~cL~~dv~~RasA~eLL~HpFl~~a~p 531 (550)
T KOG0578|consen 486 ----------------------TPKL-----------KNPEKLSPELKDFLDRCLVVDVEQRASAKELLEHPFLKMAKP 531 (550)
T ss_pred ----------------------CCCc-----------CCccccCHHHHHHHHHHhhcchhcCCCHHHHhcChhhhhcCC
Confidence 1110 011222444558999999999999999999999999965444
No 22
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=1.2e-42 Score=368.99 Aligned_cols=280 Identities=21% Similarity=0.291 Sum_probs=220.3
Q ss_pred HHcCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCChhh---HHHHHHHHHHHHhccCCcccceeeeeecCCcEEE
Q 003158 509 ATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQG---EKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQML 584 (843)
Q Consensus 509 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~l 584 (843)
..++|+.+..||+|+||.||.|+.+ +|..+|+|++++..... .+.+..|-.+|....+|.||+++-.|++.+.+||
T Consensus 139 ~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LYL 218 (550)
T KOG0605|consen 139 SLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLYL 218 (550)
T ss_pred CcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeEE
Confidence 4578999999999999999999955 69999999998765443 3567889999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCC
Q 003158 585 VYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPV 664 (843)
Q Consensus 585 V~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~ 664 (843)
||||++||++..+|... ..+++..++.++.+++.|++-+|+.| +|||||||+|+|||..|++||+|||++.-+..
T Consensus 219 iMEylPGGD~mTLL~~~--~~L~e~~arfYiaE~vlAI~~iH~~g---yIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~~ 293 (550)
T KOG0605|consen 219 IMEYLPGGDMMTLLMRK--DTLTEDWARFYIAETVLAIESIHQLG---YIHRDIKPDNLLIDAKGHIKLSDFGLSTGLDK 293 (550)
T ss_pred EEEecCCccHHHHHHhc--CcCchHHHHHHHHHHHHHHHHHHHcC---cccccCChhheeecCCCCEeeccccccchhhh
Confidence 99999999999999664 46899999999999999999999999 99999999999999999999999999854322
Q ss_pred CCCC------------------Cccc-----ce-----------------eeeeecccCCccCchhcccCCCCchhhhHH
Q 003158 665 PDIE------------------GIVP-----AH-----------------VSTVVKGTPGYLDPEYFLTHKLTDKSDVYS 704 (843)
Q Consensus 665 ~~~~------------------~~~~-----~~-----------------~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS 704 (843)
.... ...+ .. .....+|||-|||||++.+..|+..+|+||
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwWS 373 (550)
T KOG0605|consen 294 KHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWWS 373 (550)
T ss_pred hhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHHH
Confidence 1000 0000 00 012346999999999999999999999999
Q ss_pred HHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhccCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 003158 705 LGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELES 784 (843)
Q Consensus 705 ~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~ 784 (843)
+|||+|||+.|.+||........+.+ +.. -..||..-.+.+.
T Consensus 374 LG~ImyEmLvGyPPF~s~tp~~T~rk--------------------------I~n-wr~~l~fP~~~~~----------- 415 (550)
T KOG0605|consen 374 LGCIMYEMLVGYPPFCSETPQETYRK--------------------------IVN-WRETLKFPEEVDL----------- 415 (550)
T ss_pred HHHHHHHHHhCCCCCCCCCHHHHHHH--------------------------HHH-HhhhccCCCcCcc-----------
Confidence 99999999999999986553222111 110 0123332222222
Q ss_pred hhhhCCCCCCCCCccccCCCCCCCCCCCC---CccCCCCCcccCCCCCCccccccCCCCCC
Q 003158 785 IWNMMPESDTKTPEFINSEHTSKEETPPS---SSSMLKHPYVSSDVSGSNLVSGVIPTITP 842 (843)
Q Consensus 785 ~~~~~~~~~~~~~dll~~~L~~dp~~R~s---a~e~L~Hp~f~~~~~~~~~~~~~~~~~~~ 842 (843)
++++.|||.+++. ||++|+- ++|+..||||++..+. -+++..|+|.|
T Consensus 416 --------s~eA~DLI~rll~-d~~~RLG~~G~~EIK~HPfF~~v~W~--~l~~~~apfvP 465 (550)
T KOG0605|consen 416 --------SDEAKDLITRLLC-DPENRLGSKGAEEIKKHPFFKGVDWD--HLREMPAPFVP 465 (550)
T ss_pred --------cHHHHHHHHHHhc-CHHHhcCcccHHHHhcCCccccCCcc--hhhcCCCCCCC
Confidence 2445688888888 9999975 8999999999998884 34444466665
No 23
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=100.00 E-value=2.8e-43 Score=385.36 Aligned_cols=271 Identities=28% Similarity=0.475 Sum_probs=230.4
Q ss_pred ccccHHHHHHHHcCC---------CCCCcccccCCeeEEEEEeC----CCcEEEEEEeccCChhh-HHHHHHHHHHHHhc
Q 003158 499 RSFTYGEMALATNNF---------NSSTQIGQGGYGKVYKGILP----DGTVVAVKRAQEGSLQG-EKEFLTEIQFLSRL 564 (843)
Q Consensus 499 ~~~~~~~~~~~~~~~---------~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l 564 (843)
..++|+|...+...| .+.++||.|.||.||+|+++ ....||||.++....+. ..+|+.|+.||.++
T Consensus 608 DP~TYEDPnqAvreFakEId~s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQF 687 (996)
T KOG0196|consen 608 DPHTYEDPNQAVREFAKEIDPSCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQF 687 (996)
T ss_pred CCccccCccHHHHHhhhhcChhheEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccC
Confidence 456777666655444 45789999999999999975 24679999999765444 57899999999999
Q ss_pred cCCcccceeeeeecCCcEEEEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEE
Q 003158 565 HHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNIL 644 (843)
Q Consensus 565 ~h~nIv~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NIL 644 (843)
.||||++|.|+.......+||+|||++|+|+.+|+.+.. .+.+.+...+.++||.|++||-+++ +|||||.++|||
T Consensus 688 dHPNIIrLEGVVTks~PvMIiTEyMENGsLDsFLR~~DG-qftviQLVgMLrGIAsGMkYLsdm~---YVHRDLAARNIL 763 (996)
T KOG0196|consen 688 DHPNIIRLEGVVTKSKPVMIITEYMENGSLDSFLRQNDG-QFTVIQLVGMLRGIASGMKYLSDMN---YVHRDLAARNIL 763 (996)
T ss_pred CCCcEEEEEEEEecCceeEEEhhhhhCCcHHHHHhhcCC-ceEeehHHHHHHHHHHHhHHHhhcC---chhhhhhhhhee
Confidence 999999999999999999999999999999999987765 4999999999999999999999999 999999999999
Q ss_pred EcCCCcEEEeeccccccCCCCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHh-CCCCCCCCc
Q 003158 645 LDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGK 723 (843)
Q Consensus 645 l~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~ellt-g~~pf~~~~ 723 (843)
++.+..+||+|||+++.++.+. . .........-..+|.|||.+...+++.+|||||||++|||.++ |..||.+..
T Consensus 764 VNsnLvCKVsDFGLSRvledd~-~---~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmS 839 (996)
T KOG0196|consen 764 VNSNLVCKVSDFGLSRVLEDDP-E---AAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMS 839 (996)
T ss_pred eccceEEEeccccceeecccCC-C---ccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccc
Confidence 9999999999999999875432 1 1111122223468999999999999999999999999999998 999998765
Q ss_pred chHHHHHHHhhcccchhhccCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhh
Q 003158 724 NIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWN 787 (843)
Q Consensus 724 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~ 787 (843)
+. +.+..+.++-+.+.|.+|+..+.++|..||+++-.+||.+.+++..|.++..
T Consensus 840 NQ----------dVIkaIe~gyRLPpPmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDklIr 893 (996)
T KOG0196|consen 840 NQ----------DVIKAIEQGYRLPPPMDCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDKLIR 893 (996)
T ss_pred hH----------HHHHHHHhccCCCCCCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhc
Confidence 41 2233555666778899999999999999999999999999999999998764
No 24
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=100.00 E-value=3.8e-43 Score=383.53 Aligned_cols=291 Identities=23% Similarity=0.342 Sum_probs=221.3
Q ss_pred CCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCChhhHHHHHHHHHHHHhcc-CC-----cccceeeeeecCCcEEE
Q 003158 512 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLH-HR-----NLVSLVGYCDEEGEQML 584 (843)
Q Consensus 512 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~-----nIv~l~~~~~~~~~~~l 584 (843)
+|++.+.||+|+||.|-+|.+. +++.||||+++.. ..-..+...|+++|..++ |. |+|++++||...++.||
T Consensus 187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~-k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~Hlci 265 (586)
T KOG0667|consen 187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNK-KRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHLCI 265 (586)
T ss_pred EEEEEEEecccccceeEEEEecCCCcEEEEEeeccC-hHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccceee
Confidence 8999999999999999999954 6999999999863 333456678999999997 43 89999999999999999
Q ss_pred EEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCC--CcEEEeeccccccC
Q 003158 585 VYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHK--FTAKVADFGLSRLA 662 (843)
Q Consensus 585 V~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~--~~~kl~DfGla~~~ 662 (843)
|+|.+ .-+|+++++.+....++...++.|+.||+.||.+||+.+ |||+||||+|||+.+- ..+||+|||.|+..
T Consensus 266 VfELL-~~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l~---IIHcDLKPENILL~~~~r~~vKVIDFGSSc~~ 341 (586)
T KOG0667|consen 266 VFELL-STNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHELG---IIHCDLKPENILLKDPKRSRIKVIDFGSSCFE 341 (586)
T ss_pred eehhh-hhhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeeccCChhheeeccCCcCceeEEeccccccc
Confidence 99999 569999999988888999999999999999999999999 9999999999999754 37999999999976
Q ss_pred CCCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhc
Q 003158 663 PVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVI 742 (843)
Q Consensus 663 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 742 (843)
.. .......+..|+|||++.+.+|+.+.||||||||++||++| .|+..+++..+++..+.+.
T Consensus 342 ~q----------~vytYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG-~PLfpG~ne~DQl~~I~e~------- 403 (586)
T KOG0667|consen 342 SQ----------RVYTYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTG-EPLFPGDNEYDQLARIIEV------- 403 (586)
T ss_pred CC----------cceeeeeccccccchhhccCCCCCccceeehhhhHHhHhcC-ccccCCCCHHHHHHHHHHH-------
Confidence 42 22356788999999999999999999999999999999999 5666677777777654322
Q ss_pred cCCCCCCCHHHHHHHHH---HH-------HHhcccCCCCCCCHHHHHHHHHHhhh-------------hCC-CCCCCCCc
Q 003158 743 DGNMGSYPSECVEKFIK---LA-------LKCCQDETDARPSMSEVMRELESIWN-------------MMP-ESDTKTPE 798 (843)
Q Consensus 743 ~~~~~~~~~~~~~~l~~---l~-------~~c~~~~p~~RPs~~~vl~~L~~~~~-------------~~~-~~~~~~~d 798 (843)
.+.+|....+...+ .. ..|...+-.+-+...++...+..... ..+ ..+..+.|
T Consensus 404 ---lG~Pp~~mL~~~~~~~kff~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~~~~~~~~~~~F~d 480 (586)
T KOG0667|consen 404 ---LGLPPPKMLDTAKKAHKFFTSLKGFPRLCVETSAPRGTKSPEVRKYYRKARLERRGPPGSRSLESGLPKADDKLFID 480 (586)
T ss_pred ---hCCCCHHHHHhccccceehhccCCceeeeeeecccccccchhhhhhhhhhcccccCCCCCcccchhcccccHHHHHH
Confidence 22223322221111 11 11222221111111122222211111 111 23344578
Q ss_pred cccCCCCCCCCCCCCCccCCCCCcccCCCC
Q 003158 799 FINSEHTSKEETPPSSSSMLKHPYVSSDVS 828 (843)
Q Consensus 799 ll~~~L~~dp~~R~sa~e~L~Hp~f~~~~~ 828 (843)
||.+||.|||++|+|+.|||+||||++...
T Consensus 481 flk~~L~~dP~~R~tp~qal~Hpfl~~~~~ 510 (586)
T KOG0667|consen 481 FLKRCLEWDPAERITPAQALNHPFLTGTSL 510 (586)
T ss_pred HHHHHhccCchhcCCHHHHhcCcccccccc
Confidence 999999999999999999999999985444
No 25
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=1.2e-42 Score=355.85 Aligned_cols=294 Identities=24% Similarity=0.369 Sum_probs=224.6
Q ss_pred HcCCCCCCcccccCCeeEEEEEe-CCCcEEEEEEeccCChh--hHHHHHHHHHHHHhccCCc-ccceeeeeecCC-----
Q 003158 510 TNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQ--GEKEFLTEIQFLSRLHHRN-LVSLVGYCDEEG----- 580 (843)
Q Consensus 510 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~n-Iv~l~~~~~~~~----- 580 (843)
...|+..++||+|+||+||+|+. .+|+.||+|++.....+ ......+|+.+++.++|+| |+++++++....
T Consensus 10 ~~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~ 89 (323)
T KOG0594|consen 10 MFDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGI 89 (323)
T ss_pred HHHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeeccccccc
Confidence 34566678899999999999995 57999999998764332 3456789999999999999 999999997766
Q ss_pred -cEEEEEecCCCCCHHHHHhhcCC--CCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeecc
Q 003158 581 -EQMLVYEFMSNGTLRDQLSAKSK--EPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFG 657 (843)
Q Consensus 581 -~~~lV~e~~~~gsL~~~l~~~~~--~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfG 657 (843)
..++||||++ -+|.+++..... ..++...++.++.||++||+|||+++ |+||||||.|||++++|.+||+|||
T Consensus 90 ~~l~lvfe~~d-~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~---IlHRDLKPQNlLi~~~G~lKlaDFG 165 (323)
T KOG0594|consen 90 GKLYLVFEFLD-RDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHG---ILHRDLKPQNLLISSSGVLKLADFG 165 (323)
T ss_pred ceEEEEEEeec-ccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCC---eecccCCcceEEECCCCcEeeeccc
Confidence 7899999995 599999987553 35666889999999999999999999 9999999999999999999999999
Q ss_pred ccccCCCCCCCCcccceeeeeecccCCccCchhcccC-CCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcc
Q 003158 658 LSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTH-KLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSS 736 (843)
Q Consensus 658 la~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~ 736 (843)
+|+....+ ....+...+|..|+|||++.+. .|+...||||+||+++||++++..|.+..+ .++...++..
T Consensus 166 lAra~~ip-------~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se-~~ql~~If~~- 236 (323)
T KOG0594|consen 166 LARAFSIP-------MRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSE-IDQLFRIFRL- 236 (323)
T ss_pred hHHHhcCC-------cccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcH-HHHHHHHHHH-
Confidence 99965533 3345667899999999999986 789999999999999999998777765544 4444443321
Q ss_pred cchhhccCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCCCCcc
Q 003158 737 MMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSS 816 (843)
Q Consensus 737 ~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~sa~e 816 (843)
++.+.++.++.+..+.. ++....+++....+. ...+..++...|++.+||+++|++|+||+.
T Consensus 237 ---------lGtP~e~~Wp~v~~~~~--~k~~f~~~~~~~~l~-------~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~ 298 (323)
T KOG0594|consen 237 ---------LGTPNEKDWPGVSSLPD--YKAPFPKWPGPKDLS-------SILPKLDPDGIELLSKLLQYDPAKRISAKG 298 (323)
T ss_pred ---------cCCCCccCCCCcccccc--ccccCcCCCCccchH-------HhccccCccHHHHHHHHhccCcccCcCHHH
Confidence 12222222222222211 111111222222222 234555578889999999999999999999
Q ss_pred CCCCCcccCCCCCCcccc
Q 003158 817 MLKHPYVSSDVSGSNLVS 834 (843)
Q Consensus 817 ~L~Hp~f~~~~~~~~~~~ 834 (843)
+|.||||+......-.+.
T Consensus 299 al~h~yf~~~~~~~~~~~ 316 (323)
T KOG0594|consen 299 ALTHPYFSELPEKSSQLL 316 (323)
T ss_pred HhcChhhcccccchhhhh
Confidence 999999998766544433
No 26
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=1.1e-42 Score=368.02 Aligned_cols=256 Identities=27% Similarity=0.432 Sum_probs=211.9
Q ss_pred cCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCCh--hhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEEe
Q 003158 511 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 587 (843)
Q Consensus 511 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e 587 (843)
++|.+.+.||+|.||.||||+.+ +.+.||+|.+.+... ...+.+.+|+++++.++||||+.++++|+...+.|+|+|
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte 81 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTE 81 (808)
T ss_pred cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEeh
Confidence 57888999999999999999965 689999999876432 234678999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCC
Q 003158 588 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 667 (843)
Q Consensus 588 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~ 667 (843)
|+.| +|..++...+ .++++.+..++.++..||.|||+.+ |+|||+||.|||++..|.+|++|||+|+.+..
T Consensus 82 ~a~g-~L~~il~~d~--~lpEe~v~~~a~~LVsaL~yLhs~r---ilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~--- 152 (808)
T KOG0597|consen 82 YAVG-DLFTILEQDG--KLPEEQVRAIAYDLVSALYYLHSNR---ILHRDMKPQNILLEKGGTLKLCDFGLARAMST--- 152 (808)
T ss_pred hhhh-hHHHHHHhcc--CCCHHHHHHHHHHHHHHHHHHHhcC---cccccCCcceeeecCCCceeechhhhhhhccc---
Confidence 9976 9999997654 4899999999999999999999999 99999999999999999999999999997653
Q ss_pred CCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhccCCCC
Q 003158 668 EGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMG 747 (843)
Q Consensus 668 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 747 (843)
.....+.+.|||-|||||+..+..|+..+|.||+||++||+++|++||...
T Consensus 153 ----~t~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~------------------------- 203 (808)
T KOG0597|consen 153 ----NTSVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYAR------------------------- 203 (808)
T ss_pred ----CceeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHH-------------------------
Confidence 245667889999999999999999999999999999999999999999632
Q ss_pred CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCCCCccCCCCCcccCCC
Q 003158 748 SYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSSDV 827 (843)
Q Consensus 748 ~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~sa~e~L~Hp~f~~~~ 827 (843)
.+.+++..-+. +|-.-|+ ..+..+..|++.+|..||..|+|=.+++.|||+.+..
T Consensus 204 --------si~~Lv~~I~~-d~v~~p~----------------~~S~~f~nfl~gLL~kdP~~RltW~~Ll~HpF~k~~~ 258 (808)
T KOG0597|consen 204 --------SITQLVKSILK-DPVKPPS----------------TASSSFVNFLQGLLIKDPAQRLTWTDLLGHPFWKGKI 258 (808)
T ss_pred --------HHHHHHHHHhc-CCCCCcc----------------cccHHHHHHHHHHhhcChhhcccHHHHhcChHHhhhh
Confidence 12222222222 2222221 1123334577778888888888888888888887655
Q ss_pred CC
Q 003158 828 SG 829 (843)
Q Consensus 828 ~~ 829 (843)
.+
T Consensus 259 ~~ 260 (808)
T KOG0597|consen 259 NI 260 (808)
T ss_pred hh
Confidence 54
No 27
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=100.00 E-value=3.5e-42 Score=369.07 Aligned_cols=267 Identities=25% Similarity=0.472 Sum_probs=221.0
Q ss_pred cHHHHHHHHcCCCCCCcccccCCeeEEEEEeCCCcEEEEEEeccCCh--hhHHHHHHHHHHHHhccCCcccceeeeeecC
Q 003158 502 TYGEMALATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE 579 (843)
Q Consensus 502 ~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~ 579 (843)
+.++|++..+.+.+.+.||+|.||+||+|.|.. .||||+++.... +..+.|+.|+..+++-+|.||+-|.|||...
T Consensus 383 s~~~WeIp~~ev~l~~rIGsGsFGtV~Rg~whG--dVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p 460 (678)
T KOG0193|consen 383 SLEEWEIPPEEVLLGERIGSGSFGTVYRGRWHG--DVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNP 460 (678)
T ss_pred cccccccCHHHhhccceeccccccceeeccccc--ceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCC
Confidence 346777777888889999999999999999863 699999986543 3457899999999999999999999999988
Q ss_pred CcEEEEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeecccc
Q 003158 580 GEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLS 659 (843)
Q Consensus 580 ~~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla 659 (843)
.. .||+.+|+|.+|+.+++... ..++..+.+.||+|||+|+.|||.++ |||||||..||++.++++|||+|||++
T Consensus 461 ~~-AIiTqwCeGsSLY~hlHv~e-tkfdm~~~idIAqQiaqGM~YLHAK~---IIHrDLKSnNIFl~~~~kVkIgDFGLa 535 (678)
T KOG0193|consen 461 PL-AIITQWCEGSSLYTHLHVQE-TKFDMNTTIDIAQQIAQGMDYLHAKN---IIHRDLKSNNIFLHEDLKVKIGDFGLA 535 (678)
T ss_pred ce-eeeehhccCchhhhhccchh-hhhhHHHHHHHHHHHHHhhhhhhhhh---hhhhhccccceEEccCCcEEEecccce
Confidence 77 99999999999999998754 56899999999999999999999999 999999999999999999999999999
Q ss_pred ccCCCCCCCCcccceeeeeecccCCccCchhccc---CCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcc
Q 003158 660 RLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT---HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSS 736 (843)
Q Consensus 660 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~ 736 (843)
..-..-. .........|...|||||+++. .+|++.+|||||||++|||+||..||. ..+. +.
T Consensus 536 tvk~~w~-----g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPys-i~~~---------dq 600 (678)
T KOG0193|consen 536 TVKTRWS-----GEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYS-IQNR---------DQ 600 (678)
T ss_pred eeeeeec-----cccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcC-CCCh---------hh
Confidence 6533211 1222334458889999999975 568999999999999999999999998 3321 22
Q ss_pred cchhhccCC----CCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCC
Q 003158 737 MMFSVIDGN----MGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMP 790 (843)
Q Consensus 737 ~~~~~~~~~----~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~ 790 (843)
.++.+-.+. +......|+.++.+++..||..++++||.+.+++..|+.+....|
T Consensus 601 IifmVGrG~l~pd~s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~~~~p 658 (678)
T KOG0193|consen 601 IIFMVGRGYLMPDLSKIRSNCPKAMKRLLSDCWKFDREERPLFPQLLSKLEELLPSLP 658 (678)
T ss_pred eEEEecccccCccchhhhccCHHHHHHHHHHHHhcCcccCccHHHHHHHHHHhhhccc
Confidence 233332231 123356788899999999999999999999999998888765443
No 28
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=1e-41 Score=365.19 Aligned_cols=274 Identities=23% Similarity=0.330 Sum_probs=211.8
Q ss_pred CCCCCCcccccCCeeEEEEEe-CCCcEEEEEEeccCCh---hhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEEe
Q 003158 512 NFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 587 (843)
Q Consensus 512 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e 587 (843)
.|+..+.||+|+||+||+|.. .+++.||+|.+..... .....+.+|+++++.++|+||+++++++.+.+..++|||
T Consensus 1 ~f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05631 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEE
Confidence 367788999999999999996 5799999999875332 223467889999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCC
Q 003158 588 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 667 (843)
Q Consensus 588 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~ 667 (843)
|+++|+|.+++.......+++..++.++.|++.||+|||+.+ |+||||||+|||+++++.+||+|||++......
T Consensus 81 ~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~-- 155 (285)
T cd05631 81 IMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRER---IVYRDLKPENILLDDRGHIRISDLGLAVQIPEG-- 155 (285)
T ss_pred ecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCC---EEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCC--
Confidence 999999999887655556899999999999999999999999 999999999999999999999999999765321
Q ss_pred CCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhccCCCC
Q 003158 668 EGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMG 747 (843)
Q Consensus 668 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 747 (843)
.......|+..|+|||++.+..++.++|||||||++|||++|+.||........... ....+.....
T Consensus 156 ------~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~-------~~~~~~~~~~ 222 (285)
T cd05631 156 ------ETVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREE-------VDRRVKEDQE 222 (285)
T ss_pred ------CeecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhHHH-------HHHHhhcccc
Confidence 112334689999999999999999999999999999999999999975432111000 0000000011
Q ss_pred CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCCC-----CccCCCCCc
Q 003158 748 SYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPS-----SSSMLKHPY 822 (843)
Q Consensus 748 ~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~s-----a~e~L~Hp~ 822 (843)
.++...+..+. +|+++||..||++|++ ++|+++|||
T Consensus 223 ~~~~~~s~~~~---------------------------------------~li~~~l~~~P~~R~~~~~~~~~~~~~h~~ 263 (285)
T cd05631 223 EYSEKFSEDAK---------------------------------------SICRMLLTKNPKERLGCRGNGAAGVKQHPI 263 (285)
T ss_pred cCCccCCHHHH---------------------------------------HHHHHHhhcCHHHhcCCCCCCHHHHhcCHh
Confidence 12222223333 4555566666666654 899999999
Q ss_pred ccCCCCCCccccccCCCCCC
Q 003158 823 VSSDVSGSNLVSGVIPTITP 842 (843)
Q Consensus 823 f~~~~~~~~~~~~~~~~~~~ 842 (843)
|.+..+...-..-..|++.|
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~ 283 (285)
T cd05631 264 FKNINFKRLEANMLEPPFCP 283 (285)
T ss_pred hcCCCHHHHHhCcCCcCCCC
Confidence 99877765555555677766
No 29
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=5.7e-44 Score=341.85 Aligned_cols=259 Identities=23% Similarity=0.365 Sum_probs=211.2
Q ss_pred HHcCCCCCCcccccCCeeEEEEEe-CCCcEEEEEEeccCC--hhhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEE
Q 003158 509 ATNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLV 585 (843)
Q Consensus 509 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV 585 (843)
.+++|++.+.||+|.|+.||++.. ++|+.+|+|++.... ..+.+++.+|+++-+.++||||+++.+.+.+.+..++|
T Consensus 9 f~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylv 88 (355)
T KOG0033|consen 9 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLV 88 (355)
T ss_pred cchhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEE
Confidence 356788889999999999999984 579999999886432 23457889999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcC---CCcEEEeeccccccC
Q 003158 586 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDH---KFTAKVADFGLSRLA 662 (843)
Q Consensus 586 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~---~~~~kl~DfGla~~~ 662 (843)
+|+|+|++|..-+-.+ ..+++..+-.+++||++||.|+|.++ |||||+||+|+++-+ ..-+|++|||+|..+
T Consensus 89 Fe~m~G~dl~~eIV~R--~~ySEa~aSH~~rQiLeal~yCH~n~---IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l 163 (355)
T KOG0033|consen 89 FDLVTGGELFEDIVAR--EFYSEADASHCIQQILEALAYCHSNG---IVHRDLKPENLLLASKAKGAAVKLADFGLAIEV 163 (355)
T ss_pred EecccchHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHhcC---ceeccCChhheeeeeccCCCceeecccceEEEe
Confidence 9999999997766444 34778888899999999999999999 999999999999954 346999999999876
Q ss_pred CCCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhc
Q 003158 663 PVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVI 742 (843)
Q Consensus 663 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 742 (843)
.. ........|||+|||||++...+|+..+|||+-||+||-|+.|+.||.+.+. .+..
T Consensus 164 ~~--------g~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~-~rly------------- 221 (355)
T KOG0033|consen 164 ND--------GEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQ-HRLY------------- 221 (355)
T ss_pred CC--------ccccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccH-HHHH-------------
Confidence 52 2233456799999999999999999999999999999999999999986432 1111
Q ss_pred cCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCCCCccCCCCCc
Q 003158 743 DGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPY 822 (843)
Q Consensus 743 ~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~sa~e~L~Hp~ 822 (843)
.+++..-.+.++. .++..++++.+++++||+.||++|+||.|||+|||
T Consensus 222 ---------------e~I~~g~yd~~~~-----------------~w~~is~~Ak~LvrrML~~dP~kRIta~EAL~HpW 269 (355)
T KOG0033|consen 222 ---------------EQIKAGAYDYPSP-----------------EWDTVTPEAKSLIRRMLTVNPKKRITADEALKHPW 269 (355)
T ss_pred ---------------HHHhccccCCCCc-----------------ccCcCCHHHHHHHHHHhccChhhhccHHHHhCCch
Confidence 1111111111111 23455667779999999999999999999999999
Q ss_pred ccCC
Q 003158 823 VSSD 826 (843)
Q Consensus 823 f~~~ 826 (843)
++..
T Consensus 270 i~~r 273 (355)
T KOG0033|consen 270 ICNR 273 (355)
T ss_pred hcch
Confidence 9763
No 30
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-41 Score=371.29 Aligned_cols=255 Identities=26% Similarity=0.380 Sum_probs=208.8
Q ss_pred HHHcCCCCCCcccccCCeeEEEEEe-CCCcEEEEEEeccC----Ch-hhHHHHHHHHHHHHhcc-CCcccceeeeeecCC
Q 003158 508 LATNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEG----SL-QGEKEFLTEIQFLSRLH-HRNLVSLVGYCDEEG 580 (843)
Q Consensus 508 ~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~----~~-~~~~~~~~E~~~l~~l~-h~nIv~l~~~~~~~~ 580 (843)
...++|...+.||+|+||+|+.|.. .+++.||+|++... .. ...+.+.+|+.++++++ ||||+++++++....
T Consensus 14 ~~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~ 93 (370)
T KOG0583|consen 14 LSIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPT 93 (370)
T ss_pred cccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCC
Confidence 3456899999999999999999985 47899999977653 12 23456778999999998 999999999999999
Q ss_pred cEEEEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCC-CcEEEeecccc
Q 003158 581 EQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHK-FTAKVADFGLS 659 (843)
Q Consensus 581 ~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~-~~~kl~DfGla 659 (843)
..++||||+.||+|.+++.. ..++.+..+..++.|++.|++|+|+++ |+||||||+|||++.+ +++||+|||++
T Consensus 94 ~~~ivmEy~~gGdL~~~i~~--~g~l~E~~ar~~F~Qlisav~y~H~~g---i~HRDLK~ENilld~~~~~~Kl~DFG~s 168 (370)
T KOG0583|consen 94 KIYIVMEYCSGGDLFDYIVN--KGRLKEDEARKYFRQLISAVAYCHSRG---IVHRDLKPENILLDGNEGNLKLSDFGLS 168 (370)
T ss_pred eEEEEEEecCCccHHHHHHH--cCCCChHHHHHHHHHHHHHHHHHHhCC---EeeCCCCHHHEEecCCCCCEEEeccccc
Confidence 99999999999999999977 345888999999999999999999999 9999999999999999 99999999999
Q ss_pred ccCCCCCCCCcccceeeeeecccCCccCchhcccCC-CC-chhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhccc
Q 003158 660 RLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHK-LT-DKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSM 737 (843)
Q Consensus 660 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~-~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~ 737 (843)
..... ........+||+.|+|||++.+.. |+ .++||||+||+||.|++|+.||.+... ....
T Consensus 169 ~~~~~-------~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~-~~l~-------- 232 (370)
T KOG0583|consen 169 AISPG-------EDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNV-PNLY-------- 232 (370)
T ss_pred cccCC-------CCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccH-HHHH--------
Confidence 87631 123456678999999999999977 76 689999999999999999999986331 1100
Q ss_pred chhhccCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCCC--CCCCCccccCCCCCCCCCCCCCc
Q 003158 738 MFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPES--DTKTPEFINSEHTSKEETPPSSS 815 (843)
Q Consensus 738 ~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~--~~~~~dll~~~L~~dp~~R~sa~ 815 (843)
.-+...-- .+|.. ++.+.+|+.+||..||.+|+|+.
T Consensus 233 ---------------------~ki~~~~~---------------------~~p~~~~S~~~~~Li~~mL~~~P~~R~t~~ 270 (370)
T KOG0583|consen 233 ---------------------RKIRKGEF---------------------KIPSYLLSPEARSLIEKMLVPDPSTRITLL 270 (370)
T ss_pred ---------------------HHHhcCCc---------------------cCCCCcCCHHHHHHHHHHcCCCcccCCCHH
Confidence 00110000 11111 44455788889999999999999
Q ss_pred cCCCCCcccC
Q 003158 816 SMLKHPYVSS 825 (843)
Q Consensus 816 e~L~Hp~f~~ 825 (843)
|+++||||+.
T Consensus 271 ~i~~h~w~~~ 280 (370)
T KOG0583|consen 271 EILEHPWFQK 280 (370)
T ss_pred HHhhChhhcc
Confidence 9999999987
No 31
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.9e-41 Score=348.81 Aligned_cols=281 Identities=23% Similarity=0.323 Sum_probs=229.3
Q ss_pred HcCCCCCCcccccCCeeEEEEEeCC-CcEEEEEEeccCChhh---HHHHHHHHHHHHhccCCcccceeeeeecCCcEEEE
Q 003158 510 TNNFNSSTQIGQGGYGKVYKGILPD-GTVVAVKRAQEGSLQG---EKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLV 585 (843)
Q Consensus 510 ~~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV 585 (843)
-+.|+..+.||+|.-|+||++...+ +..+|+|++.+..... ..+++.|-+||+.++||.+..||+.|+.++..|+|
T Consensus 76 l~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~ 155 (459)
T KOG0610|consen 76 LRHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLV 155 (459)
T ss_pred HHHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEE
Confidence 3456667899999999999999764 6999999998765543 35678899999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCC
Q 003158 586 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVP 665 (843)
Q Consensus 586 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~ 665 (843)
||||+||+|..+.+++....+++..++.++..++-||+|||-.| ||.|||||+||||-++|++-|+||.++......
T Consensus 156 meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHmlG---ivYRDLKPENILvredGHIMLsDFDLS~~~~~~ 232 (459)
T KOG0610|consen 156 MEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHMLG---IVYRDLKPENILVREDGHIMLSDFDLSLRCPVS 232 (459)
T ss_pred EecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhhc---eeeccCCcceeEEecCCcEEeeeccccccCCCC
Confidence 99999999999999999899999999999999999999999999 999999999999999999999999997543210
Q ss_pred -CC-----------------------------C-C------------------cccceeeeeecccCCccCchhcccCCC
Q 003158 666 -DI-----------------------------E-G------------------IVPAHVSTVVKGTPGYLDPEYFLTHKL 696 (843)
Q Consensus 666 -~~-----------------------------~-~------------------~~~~~~~~~~~gt~~y~aPE~~~~~~~ 696 (843)
.. . . ......+...+||-.|+|||++.+..+
T Consensus 233 Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~GH 312 (459)
T KOG0610|consen 233 PTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEGH 312 (459)
T ss_pred CeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCCC
Confidence 00 0 0 000122345679999999999999999
Q ss_pred CchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhccCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHH
Q 003158 697 TDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMS 776 (843)
Q Consensus 697 ~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~ 776 (843)
+.++|+|+|||++|||+.|+.||.+..+... +.+++...+ .+|.
T Consensus 313 gsAVDWWtfGIflYEmLyG~TPFKG~~~~~T----------l~NIv~~~l-~Fp~------------------------- 356 (459)
T KOG0610|consen 313 GSAVDWWTFGIFLYEMLYGTTPFKGSNNKET----------LRNIVGQPL-KFPE------------------------- 356 (459)
T ss_pred CchhhHHHHHHHHHHHHhCCCCcCCCCchhh----------HHHHhcCCC-cCCC-------------------------
Confidence 9999999999999999999999987664322 122221111 1110
Q ss_pred HHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCCC----CccCCCCCcccCCCCCCccccccCCCCCCC
Q 003158 777 EVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPS----SSSMLKHPYVSSDVSGSNLVSGVIPTITPR 843 (843)
Q Consensus 777 ~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~s----a~e~L~Hp~f~~~~~~~~~~~~~~~~~~~~ 843 (843)
.++....+.|||+++|.-||++|+- |+|+-+||||.+-.+. +++..+||.-|+
T Consensus 357 ------------~~~vs~~akDLIr~LLvKdP~kRlg~~rGA~eIK~HpFF~gVnWa--Lir~~~PP~iP~ 413 (459)
T KOG0610|consen 357 ------------EPEVSSAAKDLIRKLLVKDPSKRLGSKRGAAEIKRHPFFEGVNWA--LIRCARPPEIPK 413 (459)
T ss_pred ------------CCcchhHHHHHHHHHhccChhhhhccccchHHhhcCccccCCChh--heeccCCCcCCC
Confidence 1122344568999999999999999 9999999999999997 888888887664
No 32
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.4e-41 Score=353.31 Aligned_cols=203 Identities=31% Similarity=0.498 Sum_probs=172.9
Q ss_pred cCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCChhhHHHHHHHHHHHHhccCCcccceeeeeecCC--cEEEEEe
Q 003158 511 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEG--EQMLVYE 587 (843)
Q Consensus 511 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~--~~~lV~e 587 (843)
.++...+.||+|+||+||++... +|...|||..........+.+.+|+++|++++|||||+++|...... .+++.||
T Consensus 17 ~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~mE 96 (313)
T KOG0198|consen 17 SNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFME 96 (313)
T ss_pred chhhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeeee
Confidence 34666789999999999999965 59999999987653333567899999999999999999999854444 6899999
Q ss_pred cCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcC-CCcEEEeeccccccCCCCC
Q 003158 588 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDH-KFTAKVADFGLSRLAPVPD 666 (843)
Q Consensus 588 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~-~~~~kl~DfGla~~~~~~~ 666 (843)
|+++|+|.+++.+.+. .+++..++.++.||++||+|||+++ ||||||||+|||++. ++.+||+|||+++......
T Consensus 97 y~~~GsL~~~~~~~g~-~l~E~~v~~ytr~iL~GL~ylHs~g---~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~~ 172 (313)
T KOG0198|consen 97 YAPGGSLSDLIKRYGG-KLPEPLVRRYTRQILEGLAYLHSKG---IVHCDIKPANILLDPSNGDVKLADFGLAKKLESKG 172 (313)
T ss_pred ccCCCcHHHHHHHcCC-CCCHHHHHHHHHHHHHHHHHHHhCC---EeccCcccceEEEeCCCCeEEeccCcccccccccc
Confidence 9999999999988766 7999999999999999999999999 999999999999999 7999999999998765300
Q ss_pred CCCcccceeeeeecccCCccCchhcccC-CCCchhhhHHHHHHHHHHHhCCCCCCC
Q 003158 667 IEGIVPAHVSTVVKGTPGYLDPEYFLTH-KLTDKSDVYSLGVVFLELLTGMQPISH 721 (843)
Q Consensus 667 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwS~G~~l~elltg~~pf~~ 721 (843)
..........||+.|||||++..+ ....++||||+||++.||+||+.||..
T Consensus 173 ----~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~ 224 (313)
T KOG0198|consen 173 ----TKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSE 224 (313)
T ss_pred ----ccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchh
Confidence 012223456799999999999963 334599999999999999999999975
No 33
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=4.9e-41 Score=374.47 Aligned_cols=282 Identities=20% Similarity=0.249 Sum_probs=215.9
Q ss_pred HcCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCChhhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEEec
Q 003158 510 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 588 (843)
Q Consensus 510 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e~ 588 (843)
..+|++.+.||+|+||.||+|... +++.||+|.... +.+.+|++++++++||||+++++++......++|+|+
T Consensus 91 ~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~------~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~ 164 (391)
T PHA03212 91 KAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQR------GGTATEAHILRAINHPSIIQLKGTFTYNKFTCLILPR 164 (391)
T ss_pred cCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechhh------hhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEEec
Confidence 357999999999999999999964 689999997542 3567899999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCCC
Q 003158 589 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 668 (843)
Q Consensus 589 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 668 (843)
+ .++|.+++.... .+++..++.++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+|+......
T Consensus 165 ~-~~~L~~~l~~~~--~l~~~~~~~i~~qi~~aL~ylH~~~---IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~-- 236 (391)
T PHA03212 165 Y-KTDLYCYLAAKR--NIAICDILAIERSVLRAIQYLHENR---IIHRDIKAENIFINHPGDVCLGDFGAACFPVDIN-- 236 (391)
T ss_pred C-CCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCChHhEEEcCCCCEEEEeCCccccccccc--
Confidence 9 478998886543 4788899999999999999999998 9999999999999999999999999997532211
Q ss_pred CcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCcch------HHHHHHHhhcccchhhc
Q 003158 669 GIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNI------VREVNIAYQSSMMFSVI 742 (843)
Q Consensus 669 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~------~~~~~~~~~~~~~~~~~ 742 (843)
........||+.|+|||++.+..++.++|||||||++|||++|+.||...... ..+..... ...
T Consensus 237 ----~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~------~~~ 306 (391)
T PHA03212 237 ----ANKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLII------RRS 306 (391)
T ss_pred ----ccccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHH------HHh
Confidence 11223456999999999999999999999999999999999999888643321 11111111 111
Q ss_pred cCCCCCCCH---HHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCCCCccCCC
Q 003158 743 DGNMGSYPS---ECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLK 819 (843)
Q Consensus 743 ~~~~~~~~~---~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~sa~e~L~ 819 (843)
......++. ........-...+....|..||....+... ...+.+++.+||++||++||||+|+|+
T Consensus 307 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~l~~Li~~mL~~dP~~Rpta~elL~ 375 (391)
T PHA03212 307 GTHPNEFPIDAQANLDEIYIGLAKKSSRKPGSRPLWTNLYEL-----------PIDLEYLICKMLAFDAHHRPSAEALLD 375 (391)
T ss_pred cCChhhcCcchhHHHHHHHHHHHhccCCCCCCCCCHHHHhhh-----------hhhHHHHHHHHhcCChhhCCCHHHHhc
Confidence 111111121 112222222334456667778876554321 223457999999999999999999999
Q ss_pred CCcccCC
Q 003158 820 HPYVSSD 826 (843)
Q Consensus 820 Hp~f~~~ 826 (843)
||||...
T Consensus 376 hp~f~~~ 382 (391)
T PHA03212 376 FAAFQDI 382 (391)
T ss_pred ChhhccC
Confidence 9999773
No 34
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=3.6e-42 Score=350.97 Aligned_cols=275 Identities=22% Similarity=0.329 Sum_probs=204.7
Q ss_pred CCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCChhhHHHHHHHHHHHHhccCCcccceeeeeecC--C---cEEEE
Q 003158 512 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE--G---EQMLV 585 (843)
Q Consensus 512 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~--~---~~~lV 585 (843)
.|...+++|.|+||.||+|... +++.||||+.-.+.. .-.+|+++|+.+.|||||++.-+|... + ...+|
T Consensus 25 ~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r----~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlV 100 (364)
T KOG0658|consen 25 SYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKR----YKNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLV 100 (364)
T ss_pred EEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCC----cCcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHH
Confidence 4566789999999999999964 579999998764332 124699999999999999999888432 2 45689
Q ss_pred EecCCCCCHHHHHhh--cCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCC-CcEEEeeccccccC
Q 003158 586 YEFMSNGTLRDQLSA--KSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHK-FTAKVADFGLSRLA 662 (843)
Q Consensus 586 ~e~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~-~~~kl~DfGla~~~ 662 (843)
||||+ .+|.+.++. ..+..++...++-+..||.+||.|||+.+ |+||||||.|+|+|.+ |.+||||||.|+.+
T Consensus 101 leymP-~tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~---IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L 176 (364)
T KOG0658|consen 101 LEYMP-ETLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHG---ICHRDIKPQNLLVDPDTGVLKICDFGSAKVL 176 (364)
T ss_pred HHhch-HHHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcC---cccCCCChheEEEcCCCCeEEeccCCcceee
Confidence 99996 499999875 23456788888899999999999999998 9999999999999976 89999999999987
Q ss_pred CCCCCCCcccceeeeeecccCCccCchhccc-CCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhh
Q 003158 663 PVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSV 741 (843)
Q Consensus 663 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~ 741 (843)
...+ .......|..|+|||.+.+ ..|+.+.||||.||++.||+-|++.|.+ ++..+++..+..
T Consensus 177 ~~~e--------pniSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG-~s~~dQL~eIik------- 240 (364)
T KOG0658|consen 177 VKGE--------PNISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPG-DSSVDQLVEIIK------- 240 (364)
T ss_pred ccCC--------CceeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCC-CCHHHHHHHHHH-------
Confidence 6433 2345678899999999998 5799999999999999999999777765 444444443221
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHhcccC--CCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCCCCccCCC
Q 003158 742 IDGNMGSYPSECVEKFIKLALKCCQDE--TDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLK 819 (843)
Q Consensus 742 ~~~~~~~~~~~~~~~l~~l~~~c~~~~--p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~sa~e~L~ 819 (843)
.++.+..+... |+..+ -.+-|.+...- ..+ -.....++++.||+.++|+++|.+|.+|.|+|.
T Consensus 241 ---~lG~Pt~e~I~--------~mn~~y~~~~~p~ik~~~--~~~--~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~ 305 (364)
T KOG0658|consen 241 ---VLGTPTREDIK--------SMNPNYTEFKFPQIKAHP--WHK--VFFKRLPPDALDLLSKLLQYSPSKRLSALEALA 305 (364)
T ss_pred ---HhCCCCHHHHh--------hcCcccccccCccccccc--cee--ecccCCCHHHHHHHHHHhccChhhcCCHHHHhc
Confidence 12222222211 11111 11111111110 000 022345677789999999999999999999999
Q ss_pred CCcccC
Q 003158 820 HPYVSS 825 (843)
Q Consensus 820 Hp~f~~ 825 (843)
||||..
T Consensus 306 h~fFde 311 (364)
T KOG0658|consen 306 HPFFDE 311 (364)
T ss_pred chhhHH
Confidence 999954
No 35
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=5.1e-41 Score=360.46 Aligned_cols=281 Identities=23% Similarity=0.346 Sum_probs=209.0
Q ss_pred cCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCCh-hhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEEec
Q 003158 511 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 588 (843)
Q Consensus 511 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e~ 588 (843)
++|++.+.||+|+||+||+|... +++.||+|.+..... .....+.+|+++++.++||||+++++++..++..++||||
T Consensus 5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 84 (288)
T cd07871 5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVFEY 84 (288)
T ss_pred ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEeC
Confidence 56888999999999999999965 689999999875332 2345678999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCCC
Q 003158 589 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 668 (843)
Q Consensus 589 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 668 (843)
++ |+|.+++.... ..+++..+..++.||+.||+|||+++ |+||||||+|||+++++.+||+|||+++......
T Consensus 85 ~~-~~l~~~l~~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~-- 157 (288)
T cd07871 85 LD-SDLKQYLDNCG-NLMSMHNVKIFMFQLLRGLSYCHKRK---ILHRDLKPQNLLINEKGELKLADFGLARAKSVPT-- 157 (288)
T ss_pred CC-cCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEECCCCCEEECcCcceeeccCCC--
Confidence 97 59999886543 35788899999999999999999999 9999999999999999999999999997643221
Q ss_pred CcccceeeeeecccCCccCchhccc-CCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhccCCCC
Q 003158 669 GIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMG 747 (843)
Q Consensus 669 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 747 (843)
.......+++.|+|||.+.+ ..++.++||||+||++|||++|+.||..... .+....... ..+
T Consensus 158 -----~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~-~~~~~~~~~----------~~~ 221 (288)
T cd07871 158 -----KTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTV-KEELHLIFR----------LLG 221 (288)
T ss_pred -----ccccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHH----------HhC
Confidence 11223457899999999876 5689999999999999999999999975432 222211110 011
Q ss_pred CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCCCCccCCCCCcc
Q 003158 748 SYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYV 823 (843)
Q Consensus 748 ~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~sa~e~L~Hp~f 823 (843)
..+.+.+..+.......-...|..|+.. ..+..+..+....||+++||++||++|+||+|+|+||||
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~hp~f 288 (288)
T cd07871 222 TPTEETWPGITSNEEFRSYLFPQYRAQP---------LINHAPRLDTDGIDLLSSLLLYETKSRISAEAALRHSYF 288 (288)
T ss_pred CCChHHhhccccchhhhccccCccCCCc---------hHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcCCCC
Confidence 1122222211110000000011112111 111223445667799999999999999999999999998
No 36
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.9e-41 Score=368.20 Aligned_cols=275 Identities=23% Similarity=0.365 Sum_probs=222.4
Q ss_pred HHHHHcCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCChhh---HHHHHHHHHHHHhc-cCCcccceeeeeecCC
Q 003158 506 MALATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQG---EKEFLTEIQFLSRL-HHRNLVSLVGYCDEEG 580 (843)
Q Consensus 506 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~ 580 (843)
.....++|....+||+|.||+|+++..+ +++.+|||++++...-. .+..+.|.+++... +||.++.++.+|...+
T Consensus 363 ~~~~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~ 442 (694)
T KOG0694|consen 363 GPLTLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKE 442 (694)
T ss_pred CcccccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCC
Confidence 3455678999999999999999999965 68899999999765432 35667888888877 5999999999999999
Q ss_pred cEEEEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccc
Q 003158 581 EQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSR 660 (843)
Q Consensus 581 ~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~ 660 (843)
++|+||||+.||++..+. ....+++..+..++..|+.||.|||+++ |||||||.+|||+|.+|.+||+|||+++
T Consensus 443 ~l~fvmey~~Ggdm~~~~---~~~~F~e~rarfyaAev~l~L~fLH~~~---IIYRDlKLdNiLLD~eGh~kiADFGlcK 516 (694)
T KOG0694|consen 443 HLFFVMEYVAGGDLMHHI---HTDVFSEPRARFYAAEVVLGLQFLHENG---IIYRDLKLDNLLLDTEGHVKIADFGLCK 516 (694)
T ss_pred eEEEEEEecCCCcEEEEE---ecccccHHHHHHHHHHHHHHHHHHHhcC---ceeeecchhheEEcccCcEEeccccccc
Confidence 999999999999944333 3456999999999999999999999999 9999999999999999999999999998
Q ss_pred cCCCCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchh
Q 003158 661 LAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFS 740 (843)
Q Consensus 661 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~ 740 (843)
.... ....+...+||+.|||||++.+..|+.++|+|||||+||||+.|..||...+. .+.. .
T Consensus 517 e~m~-------~g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddE-ee~F----------d 578 (694)
T KOG0694|consen 517 EGMG-------QGDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDE-EEVF----------D 578 (694)
T ss_pred ccCC-------CCCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCH-HHHH----------H
Confidence 5432 23456778999999999999999999999999999999999999999975542 1111 1
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCCC-----Cc
Q 003158 741 VIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPS-----SS 815 (843)
Q Consensus 741 ~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~s-----a~ 815 (843)
.+-.....+|..++.+...++.+ +|+.+|++|.- |+
T Consensus 579 sI~~d~~~yP~~ls~ea~~il~~---------------------------------------ll~k~p~kRLG~~e~d~~ 619 (694)
T KOG0694|consen 579 SIVNDEVRYPRFLSKEAIAIMRR---------------------------------------LLRKNPEKRLGSGERDAE 619 (694)
T ss_pred HHhcCCCCCCCcccHHHHHHHHH---------------------------------------HhccCcccccCCCCCCch
Confidence 11112233455555555555444 45555555543 57
Q ss_pred cCCCCCcccCCCCCCccccccCCCCCCC
Q 003158 816 SMLKHPYVSSDVSGSNLVSGVIPTITPR 843 (843)
Q Consensus 816 e~L~Hp~f~~~~~~~~~~~~~~~~~~~~ 843 (843)
++..||||++..+.....+.+.|||.|+
T Consensus 620 ~i~~hpFFr~i~w~~L~~r~i~PPf~P~ 647 (694)
T KOG0694|consen 620 DIKKHPFFRSIDWDDLLNRRIKPPFVPT 647 (694)
T ss_pred hhhhCCccccCCHHHHhhccCCCCCCcc
Confidence 8999999999999988889999999885
No 37
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=4e-41 Score=361.78 Aligned_cols=254 Identities=20% Similarity=0.305 Sum_probs=203.6
Q ss_pred cCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCCh---hhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEE
Q 003158 511 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 586 (843)
Q Consensus 511 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~ 586 (843)
++|++.+.||+|+||.||+|... +++.||+|++..... ...+.+.+|+++++.++||||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLM 80 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEE
Confidence 46888999999999999999965 689999999864322 23456889999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCC
Q 003158 587 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 666 (843)
Q Consensus 587 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~ 666 (843)
||+++|+|.+++.... .+++..+..++.|++.||+|||+++ |+||||||+||++++++.+||+|||+++.....
T Consensus 81 e~~~~~~L~~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~- 154 (291)
T cd05612 81 EYVPGGELFSYLRNSG--RFSNSTGLFYASEIVCALEYLHSKE---IVYRDLKPENILLDKEGHIKLTDFGFAKKLRDR- 154 (291)
T ss_pred eCCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCHHHeEECCCCCEEEEecCcchhccCC-
Confidence 9999999999997643 5788899999999999999999999 999999999999999999999999999765321
Q ss_pred CCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhccCCC
Q 003158 667 IEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNM 746 (843)
Q Consensus 667 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 746 (843)
.....|++.|+|||++.+..++.++|||||||++|||++|+.||...... ..... +..+ .
T Consensus 155 ---------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~-~~~~~---------i~~~-~ 214 (291)
T cd05612 155 ---------TWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPF-GIYEK---------ILAG-K 214 (291)
T ss_pred ---------cccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHH---------HHhC-C
Confidence 12346899999999999999999999999999999999999999754321 10000 0000 0
Q ss_pred CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCC-----CCccCCCCC
Q 003158 747 GSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPP-----SSSSMLKHP 821 (843)
Q Consensus 747 ~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~-----sa~e~L~Hp 821 (843)
..++.. .+..+.+++++||..||++|+ +++|+++||
T Consensus 215 ~~~~~~---------------------------------------~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~ 255 (291)
T cd05612 215 LEFPRH---------------------------------------LDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNHR 255 (291)
T ss_pred cCCCcc---------------------------------------CCHHHHHHHHHHcCCCHHHccCCccCCHHHHhcCc
Confidence 001111 122334677778888888888 499999999
Q ss_pred cccCCCCC
Q 003158 822 YVSSDVSG 829 (843)
Q Consensus 822 ~f~~~~~~ 829 (843)
||....+.
T Consensus 256 ~~~~~~~~ 263 (291)
T cd05612 256 WFKSVDWD 263 (291)
T ss_pred cccCCCHH
Confidence 99765443
No 38
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.8e-41 Score=366.34 Aligned_cols=255 Identities=26% Similarity=0.382 Sum_probs=211.9
Q ss_pred CCCCCCcccccCCeeEEEEEe-CCCcEEEEEEeccCCh---hhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEEe
Q 003158 512 NFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 587 (843)
Q Consensus 512 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e 587 (843)
-|+..+.||+|+.|.|..|+. .+|+.+|||++.+... .....+.+|+-+|+.+.|||++++++++.+..++|+|.|
T Consensus 13 pwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylvlE 92 (786)
T KOG0588|consen 13 PWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLVLE 92 (786)
T ss_pred ceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEEEE
Confidence 466678999999999999995 5799999999986522 123568899999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCC
Q 003158 588 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 667 (843)
Q Consensus 588 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~ 667 (843)
|+++|.|.+++..++ ++++.++.+++.||+.|+.|+|..+ |+|||+||+|+|+|..+++||+|||+|.....
T Consensus 93 yv~gGELFdylv~kG--~l~e~eaa~ff~QIi~gv~yCH~~~---icHRDLKpENlLLd~~~nIKIADFGMAsLe~~--- 164 (786)
T KOG0588|consen 93 YVPGGELFDYLVRKG--PLPEREAAHFFRQILDGVSYCHAFN---ICHRDLKPENLLLDVKNNIKIADFGMASLEVP--- 164 (786)
T ss_pred ecCCchhHHHHHhhC--CCCCHHHHHHHHHHHHHHHHHhhhc---ceeccCCchhhhhhcccCEeeeccceeecccC---
Confidence 999999999997755 5889999999999999999999999 99999999999999999999999999987543
Q ss_pred CCcccceeeeeecccCCccCchhcccCCCC-chhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhccCCC
Q 003158 668 EGIVPAHVSTVVKGTPGYLDPEYFLTHKLT-DKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNM 746 (843)
Q Consensus 668 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 746 (843)
.......+|++.|.|||++++.+|. .++||||.|||||.|+||+.||+++. ....+.+ ++.
T Consensus 165 -----gklLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdN-ir~LLlK-V~~----------- 226 (786)
T KOG0588|consen 165 -----GKLLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDN-IRVLLLK-VQR----------- 226 (786)
T ss_pred -----CccccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCcc-HHHHHHH-HHc-----------
Confidence 3445667899999999999999885 58999999999999999999998432 2111111 111
Q ss_pred CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCCCCccCCCCCcccCC
Q 003158 747 GSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSSD 826 (843)
Q Consensus 747 ~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~sa~e~L~Hp~f~~~ 826 (843)
..+.+......++-|||++||.+||++|+|.+|+++|||++.-
T Consensus 227 -------------------------------------G~f~MPs~Is~eaQdLLr~ml~VDp~~RiT~~eI~kHP~l~g~ 269 (786)
T KOG0588|consen 227 -------------------------------------GVFEMPSNISSEAQDLLRRMLDVDPSTRITTEEILKHPFLSGY 269 (786)
T ss_pred -------------------------------------CcccCCCcCCHHHHHHHHHHhccCccccccHHHHhhCchhhcC
Confidence 1111222234455589999999999999999999999999775
Q ss_pred CCC
Q 003158 827 VSG 829 (843)
Q Consensus 827 ~~~ 829 (843)
..-
T Consensus 270 ~~~ 272 (786)
T KOG0588|consen 270 TSL 272 (786)
T ss_pred CCC
Confidence 553
No 39
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=2.8e-40 Score=363.34 Aligned_cols=264 Identities=27% Similarity=0.462 Sum_probs=210.2
Q ss_pred HHHHcCCCCCCcccccCCeeEEEEEe------CCCcEEEEEEeccCCh-hhHHHHHHHHHHHHhc-cCCcccceeeeeec
Q 003158 507 ALATNNFNSSTQIGQGGYGKVYKGIL------PDGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRL-HHRNLVSLVGYCDE 578 (843)
Q Consensus 507 ~~~~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~ 578 (843)
.+..++|++.+.||+|+||.||+|.. .+++.||||++..... ...+.+.+|+++++.+ +||||++++++|..
T Consensus 3 ~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~ 82 (338)
T cd05102 3 EFPRDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTK 82 (338)
T ss_pred ccchhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecC
Confidence 34567899999999999999999974 2357899999875432 3346789999999999 89999999998875
Q ss_pred C-CcEEEEEecCCCCCHHHHHhhcC-------------------------------------------------------
Q 003158 579 E-GEQMLVYEFMSNGTLRDQLSAKS------------------------------------------------------- 602 (843)
Q Consensus 579 ~-~~~~lV~e~~~~gsL~~~l~~~~------------------------------------------------------- 602 (843)
. +..++||||+++|+|.+++....
T Consensus 83 ~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (338)
T cd05102 83 PNGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQE 162 (338)
T ss_pred CCCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchh
Confidence 4 46899999999999999986532
Q ss_pred -----CCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCCCCcccceeee
Q 003158 603 -----KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVST 677 (843)
Q Consensus 603 -----~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~ 677 (843)
..++++..+..++.||++||+|||+++ |+||||||+|||++.++.+||+|||+++....... .....
T Consensus 163 ~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~-----~~~~~ 234 (338)
T cd05102 163 TDDLWKSPLTMEDLICYSFQVARGMEFLASRK---CIHRDLAARNILLSENNVVKICDFGLARDIYKDPD-----YVRKG 234 (338)
T ss_pred ccccccCCCCHHHHHHHHHHHHHHHHHHHHCC---EECCCCccceEEEcCCCcEEEeecccccccccCcc-----hhccc
Confidence 134778888999999999999999998 99999999999999999999999999986532110 01112
Q ss_pred eecccCCccCchhcccCCCCchhhhHHHHHHHHHHHh-CCCCCCCCcchHHHHHHHhhcccchhhccCCCCCCCHHHHHH
Q 003158 678 VVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEK 756 (843)
Q Consensus 678 ~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 756 (843)
...+++.|+|||++.+..++.++|||||||++|||++ |..||........... .+..+.....+..+++.
T Consensus 235 ~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~ 305 (338)
T cd05102 235 SARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEEFCQ---------RLKDGTRMRAPENATPE 305 (338)
T ss_pred CCCCCccccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHHHHH---------HHhcCCCCCCCCCCCHH
Confidence 2345678999999999999999999999999999997 9999975432211111 11222233345566778
Q ss_pred HHHHHHHhcccCCCCCCCHHHHHHHHHHhhh
Q 003158 757 FIKLALKCCQDETDARPSMSEVMRELESIWN 787 (843)
Q Consensus 757 l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~ 787 (843)
+.+++.+||+.+|.+||++.++++.|+++..
T Consensus 306 l~~li~~cl~~dp~~RPs~~el~~~l~~~~~ 336 (338)
T cd05102 306 IYRIMLACWQGDPKERPTFSALVEILGDLLQ 336 (338)
T ss_pred HHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 9999999999999999999999999998653
No 40
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=7.7e-41 Score=366.71 Aligned_cols=199 Identities=26% Similarity=0.397 Sum_probs=174.1
Q ss_pred HcCCCCCCcccccCCeeEEEEEeCC--CcEEEEEEeccCC---hhhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEE
Q 003158 510 TNNFNSSTQIGQGGYGKVYKGILPD--GTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQML 584 (843)
Q Consensus 510 ~~~~~~~~~lg~G~~g~Vy~~~~~~--~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~l 584 (843)
.++|++.+.||+|+||.||+|...+ +..||+|++.... ....+.+.+|+++++.++||||+++++++.+.+..++
T Consensus 29 ~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~l 108 (340)
T PTZ00426 29 YEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLYL 108 (340)
T ss_pred hhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEEE
Confidence 4568889999999999999998543 4689999986432 2234568899999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCC
Q 003158 585 VYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPV 664 (843)
Q Consensus 585 V~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~ 664 (843)
||||+++|+|.+++.... .+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 109 v~Ey~~~g~L~~~i~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~~ 183 (340)
T PTZ00426 109 VLEFVIGGEFFTFLRRNK--RFPNDVGCFYAAQIVLIFEYLQSLN---IVYRDLKPENLLLDKDGFIKMTDFGFAKVVDT 183 (340)
T ss_pred EEeCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---eEccCCCHHHEEECCCCCEEEecCCCCeecCC
Confidence 999999999999997643 4888899999999999999999999 99999999999999999999999999976532
Q ss_pred CCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCc
Q 003158 665 PDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 723 (843)
Q Consensus 665 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~ 723 (843)
. .....||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 184 ~----------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~ 232 (340)
T PTZ00426 184 R----------TYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANE 232 (340)
T ss_pred C----------cceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCC
Confidence 1 123468999999999999889999999999999999999999997544
No 41
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.3e-41 Score=325.90 Aligned_cols=255 Identities=25% Similarity=0.385 Sum_probs=214.7
Q ss_pred HcCCCCCCcccccCCeeEEEEEe-CCCcEEEEEEeccCChh---hHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEE
Q 003158 510 TNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQ---GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLV 585 (843)
Q Consensus 510 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV 585 (843)
.++|++.+.||+|.||.||.|+. +++-.||+|++.+.... .+.++.+|+++-+.++||||++++++|.++...||+
T Consensus 21 l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyLi 100 (281)
T KOG0580|consen 21 LDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYLI 100 (281)
T ss_pred hhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEEE
Confidence 46789999999999999999995 57889999998765433 257899999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCC
Q 003158 586 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVP 665 (843)
Q Consensus 586 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~ 665 (843)
+||..+|++...|++.....+++.....++.|+|.||.|+|..+ ||||||||+|+|++..+..||+|||.+...+
T Consensus 101 lEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~---VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p-- 175 (281)
T KOG0580|consen 101 LEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAP-- 175 (281)
T ss_pred EEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccCC---cccCCCCHHHhccCCCCCeeccCCCceeecC--
Confidence 99999999999998777778999999999999999999999998 9999999999999999999999999987543
Q ss_pred CCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhccCC
Q 003158 666 DIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGN 745 (843)
Q Consensus 666 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 745 (843)
.......+||.-|.+||...+..++..+|+|++|++.||++.|.+||.....
T Consensus 176 -------~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~--------------------- 227 (281)
T KOG0580|consen 176 -------SNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSH--------------------- 227 (281)
T ss_pred -------CCCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhh---------------------
Confidence 2344667899999999999999999999999999999999999999964321
Q ss_pred CCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCCCCccCCCCCcccC
Q 003158 746 MGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSS 825 (843)
Q Consensus 746 ~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~sa~e~L~Hp~f~~ 825 (843)
.+.++-+.++=-..| +..+..+.|+|.++|..+|.+|.+-.|++.|||+..
T Consensus 228 ---------~etYkrI~k~~~~~p--------------------~~is~~a~dlI~~ll~~~p~~r~~l~~v~~hpwI~a 278 (281)
T KOG0580|consen 228 ---------SETYKRIRKVDLKFP--------------------STISGGAADLISRLLVKNPIERLALTEVMDHPWIVA 278 (281)
T ss_pred ---------HHHHHHHHHccccCC--------------------cccChhHHHHHHHHhccCccccccHHHHhhhHHHHh
Confidence 111111111111111 122344568888899999999999999999999865
Q ss_pred C
Q 003158 826 D 826 (843)
Q Consensus 826 ~ 826 (843)
.
T Consensus 279 ~ 279 (281)
T KOG0580|consen 279 N 279 (281)
T ss_pred c
Confidence 4
No 42
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=100.00 E-value=3.8e-40 Score=349.86 Aligned_cols=262 Identities=30% Similarity=0.428 Sum_probs=218.0
Q ss_pred HHcCCCCCCcccccCCeeEEEEEeCCCcEEEEEEeccCChhh-HHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEEe
Q 003158 509 ATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQG-EKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 587 (843)
Q Consensus 509 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e 587 (843)
..+...+.++||+|-||.|..+....+..||||+++...... .++|.+|+++|.+++||||++++|+|..++.+++|+|
T Consensus 536 PRs~L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~E 615 (807)
T KOG1094|consen 536 PRSRLRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMITE 615 (807)
T ss_pred chhheehhhhhcCcccceeEEEEecCceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHHHH
Confidence 345566789999999999999999888999999999765554 5899999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCC
Q 003158 588 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 667 (843)
Q Consensus 588 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~ 667 (843)
||++|+|..++.++...........+|+.||+.|++||.+.+ +|||||.++|||+|.++++||+|||+++-+-..++
T Consensus 616 YmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~n---fVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~y 692 (807)
T KOG1094|consen 616 YMENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESLN---FVHRDLATRNCLVDGEFTIKIADFGMSRNLYSGDY 692 (807)
T ss_pred HHhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhhc---hhhccccccceeecCcccEEecCcccccccccCCc
Confidence 999999999998875555566677789999999999999998 99999999999999999999999999997655543
Q ss_pred CCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHh--CCCCCCCCcchHHHHHHHhhcccchhhcc-C
Q 003158 668 EGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT--GMQPISHGKNIVREVNIAYQSSMMFSVID-G 744 (843)
Q Consensus 668 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~ellt--g~~pf~~~~~~~~~~~~~~~~~~~~~~~~-~ 744 (843)
.. ......-..+|||+|.+.-++++.+||||+||+++||+++ ...||....+..- ++. ...+.+ +
T Consensus 693 y~-----vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~v-ven------~~~~~~~~ 760 (807)
T KOG1094|consen 693 YR-----VQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQV-VEN------AGEFFRDQ 760 (807)
T ss_pred ee-----eecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHH-HHh------hhhhcCCC
Confidence 32 2233345679999999999999999999999999999987 7789875443211 110 011111 1
Q ss_pred C---CCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHh
Q 003158 745 N---MGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 785 (843)
Q Consensus 745 ~---~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~ 785 (843)
. ....|.-|+..+++++..||..+..+||+++++...|++.
T Consensus 761 ~~~~~l~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~~lq~~ 804 (807)
T KOG1094|consen 761 GRQVVLSRPPACPQGLYELMLRCWRRESEQRPSFEQLHLFLQED 804 (807)
T ss_pred CcceeccCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHHHHHHh
Confidence 1 2345788999999999999999999999999999888753
No 43
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-41 Score=358.42 Aligned_cols=241 Identities=29% Similarity=0.515 Sum_probs=207.3
Q ss_pred CCCCcccccCCeeEEEEEeCCCcEEEEEEeccCChhhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEEecCCCCC
Q 003158 514 NSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGT 593 (843)
Q Consensus 514 ~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e~~~~gs 593 (843)
..++-||.|+.|.||+|+++ ++.||||+++. .-..+|+-|++++|+||+.|.|+|...-.+|||||||..|-
T Consensus 127 sELeWlGSGaQGAVF~Grl~-netVAVKKV~e-------lkETdIKHLRkLkH~NII~FkGVCtqsPcyCIiMEfCa~Gq 198 (904)
T KOG4721|consen 127 SELEWLGSGAQGAVFLGRLH-NETVAVKKVRE-------LKETDIKHLRKLKHPNIITFKGVCTQSPCYCIIMEFCAQGQ 198 (904)
T ss_pred hhhhhhccCcccceeeeecc-CceehhHHHhh-------hhhhhHHHHHhccCcceeeEeeeecCCceeEEeeecccccc
Confidence 34577999999999999985 57899998763 12357889999999999999999999999999999999999
Q ss_pred HHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCCCCcccc
Q 003158 594 LRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPA 673 (843)
Q Consensus 594 L~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~ 673 (843)
|.+.|+.. .++.......|..+||.|+.|||.+. |||||||.-||||..+..|||+|||.++.... .
T Consensus 199 L~~VLka~--~~itp~llv~Wsk~IA~GM~YLH~hK---IIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~--------~ 265 (904)
T KOG4721|consen 199 LYEVLKAG--RPITPSLLVDWSKGIAGGMNYLHLHK---IIHRDLKSPNILISYDDVVKISDFGTSKELSD--------K 265 (904)
T ss_pred HHHHHhcc--CccCHHHHHHHHHHhhhhhHHHHHhh---HhhhccCCCceEeeccceEEeccccchHhhhh--------h
Confidence 99999664 45778888899999999999999999 99999999999999999999999999986542 1
Q ss_pred eeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhccCCC-CCCCHH
Q 003158 674 HVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNM-GSYPSE 752 (843)
Q Consensus 674 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 752 (843)
.......||..|||||+++..++++|+|||||||+||||+||..||.+.+. ..+++-+-...+ .+.|..
T Consensus 266 STkMSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVds----------sAIIwGVGsNsL~LpvPst 335 (904)
T KOG4721|consen 266 STKMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDS----------SAIIWGVGSNSLHLPVPST 335 (904)
T ss_pred hhhhhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccch----------heeEEeccCCcccccCccc
Confidence 223457899999999999999999999999999999999999999976442 233333333333 356899
Q ss_pred HHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHh
Q 003158 753 CVEKFIKLALKCCQDETDARPSMSEVMRELESI 785 (843)
Q Consensus 753 ~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~ 785 (843)
|++.+.-++++||+..|..||+|.+++..|.-.
T Consensus 336 cP~GfklL~Kqcw~sKpRNRPSFrqil~HldIa 368 (904)
T KOG4721|consen 336 CPDGFKLLLKQCWNSKPRNRPSFRQILLHLDIA 368 (904)
T ss_pred CchHHHHHHHHHHhcCCCCCccHHHHHHHHhhc
Confidence 999999999999999999999999999988754
No 44
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.5e-41 Score=388.46 Aligned_cols=261 Identities=32% Similarity=0.529 Sum_probs=219.8
Q ss_pred cCCCCCCcccccCCeeEEEEEeC--CCc----EEEEEEeccCC-hhhHHHHHHHHHHHHhccCCcccceeeeeecCCcEE
Q 003158 511 NNFNSSTQIGQGGYGKVYKGILP--DGT----VVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQM 583 (843)
Q Consensus 511 ~~~~~~~~lg~G~~g~Vy~~~~~--~~~----~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~ 583 (843)
.+.+..+.||+|+||.||.|... +|. .||||.+.... .+...+|.+|..+|+.++|||||+++|+|.+.+..+
T Consensus 692 ~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~~~ 771 (1025)
T KOG1095|consen 692 KNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGPPL 771 (1025)
T ss_pred hheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCCcE
Confidence 44455788999999999999964 343 49999998754 445689999999999999999999999999999999
Q ss_pred EEEecCCCCCHHHHHhhcC-----CCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccc
Q 003158 584 LVYEFMSNGTLRDQLSAKS-----KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGL 658 (843)
Q Consensus 584 lV~e~~~~gsL~~~l~~~~-----~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGl 658 (843)
|++|||++|+|..+|++.+ ...+...+.+.++.|||+|+.||++++ +|||||.++|||++....|||+|||+
T Consensus 772 i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~---fvHRDLAaRNCLL~~~r~VKIaDFGl 848 (1025)
T KOG1095|consen 772 ILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKH---FVHRDLAARNCLLDERRVVKIADFGL 848 (1025)
T ss_pred EEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCC---CcCcchhhhheeecccCcEEEcccch
Confidence 9999999999999998742 345888999999999999999999999 99999999999999999999999999
Q ss_pred cccCCCCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHh-CCCCCCCCcchHHHHHHHhhccc
Q 003158 659 SRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSM 737 (843)
Q Consensus 659 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~ 737 (843)
|+.....+++... ....-...|||||.+..+.++.|+|||||||++||++| |..||....+.. .
T Consensus 849 ArDiy~~~yyr~~-----~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~----------v 913 (1025)
T KOG1095|consen 849 ARDIYDKDYYRKH-----GEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFE----------V 913 (1025)
T ss_pred hHhhhhchheecc-----CccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchHH----------H
Confidence 9955443332211 11123468999999999999999999999999999999 999998765421 1
Q ss_pred chhhccCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhC
Q 003158 738 MFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMM 789 (843)
Q Consensus 738 ~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~ 789 (843)
+..+..+.+.+.|..|++.++++|..||+.+|++||++..+++.+..+.+..
T Consensus 914 ~~~~~~ggRL~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i~~~~ 965 (1025)
T KOG1095|consen 914 LLDVLEGGRLDPPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAISNAA 965 (1025)
T ss_pred HHHHHhCCccCCCCCCChHHHHHHHHHccCChhhCccHHHHHhhhhhhhhhh
Confidence 2234445577889999999999999999999999999999999988886643
No 45
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=7.9e-41 Score=365.78 Aligned_cols=198 Identities=25% Similarity=0.424 Sum_probs=174.8
Q ss_pred cCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCCh---hhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEE
Q 003158 511 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 586 (843)
Q Consensus 511 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~ 586 (843)
++|++.+.||+|+||.||+|+.. +++.||+|++..... ...+.+.+|++++++++||||+++++++.+++..++||
T Consensus 18 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 97 (329)
T PTZ00263 18 SDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFLL 97 (329)
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEEE
Confidence 56888999999999999999975 689999999875322 23456889999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCC
Q 003158 587 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 666 (843)
Q Consensus 587 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~ 666 (843)
||+++|+|.+++.... .+++..+..++.|++.||+|||+++ |+||||||+|||+++++.+||+|||+++.....
T Consensus 98 e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~- 171 (329)
T PTZ00263 98 EFVVGGELFTHLRKAG--RFPNDVAKFYHAELVLAFEYLHSKD---IIYRDLKPENLLLDNKGHVKVTDFGFAKKVPDR- 171 (329)
T ss_pred cCCCCChHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCHHHEEECCCCCEEEeeccCceEcCCC-
Confidence 9999999999997643 4788888999999999999999999 999999999999999999999999999865321
Q ss_pred CCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCc
Q 003158 667 IEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 723 (843)
Q Consensus 667 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~ 723 (843)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 172 ---------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~ 219 (329)
T PTZ00263 172 ---------TFTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDT 219 (329)
T ss_pred ---------cceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCC
Confidence 123468999999999999999999999999999999999999997543
No 46
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-40 Score=346.82 Aligned_cols=266 Identities=28% Similarity=0.399 Sum_probs=207.7
Q ss_pred HHHcCCCCCCcccccCCeeEEEEEe-CCCcEEEEEEeccCChh--------------hHHHHHHHHHHHHhccCCcccce
Q 003158 508 LATNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQ--------------GEKEFLTEIQFLSRLHHRNLVSL 572 (843)
Q Consensus 508 ~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--------------~~~~~~~E~~~l~~l~h~nIv~l 572 (843)
...++|++...||+|.||.|-+|+. .+++.||||++.+.... ..+...+||.+|++++|||||+|
T Consensus 94 k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~L 173 (576)
T KOG0585|consen 94 KQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKL 173 (576)
T ss_pred eehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEE
Confidence 3457899999999999999999995 47999999998753221 12478999999999999999999
Q ss_pred eeeeec--CCcEEEEEecCCCCCHHHHHhhcCCCC-cchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCC
Q 003158 573 VGYCDE--EGEQMLVYEFMSNGTLRDQLSAKSKEP-LGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKF 649 (843)
Q Consensus 573 ~~~~~~--~~~~~lV~e~~~~gsL~~~l~~~~~~~-l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~ 649 (843)
+++..+ .+.+|||+|||..|.+... ....+ +.+.+++++.+++..||+|||.++ ||||||||+|+|++++|
T Consensus 174 iEvLDDP~s~~~YlVley~s~G~v~w~---p~d~~els~~~Ar~ylrDvv~GLEYLH~Qg---iiHRDIKPsNLLl~~~g 247 (576)
T KOG0585|consen 174 IEVLDDPESDKLYLVLEYCSKGEVKWC---PPDKPELSEQQARKYLRDVVLGLEYLHYQG---IIHRDIKPSNLLLSSDG 247 (576)
T ss_pred EEeecCcccCceEEEEEeccCCccccC---CCCcccccHHHHHHHHHHHHHHHHHHHhcC---eeccccchhheEEcCCC
Confidence 999866 4689999999998877553 23334 899999999999999999999999 99999999999999999
Q ss_pred cEEEeeccccccCCCCCCCCcccceeeeeecccCCccCchhcccCC----CCchhhhHHHHHHHHHHHhCCCCCCCCcch
Q 003158 650 TAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHK----LTDKSDVYSLGVVFLELLTGMQPISHGKNI 725 (843)
Q Consensus 650 ~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~sDvwS~G~~l~elltg~~pf~~~~~~ 725 (843)
+|||+|||.+.........+ .........||+.|+|||...++. .+.+.||||+||+||.|+.|+.||.+....
T Consensus 248 ~VKIsDFGVs~~~~~~~~~~--~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~~ 325 (576)
T KOG0585|consen 248 TVKISDFGVSNEFPQGSDEG--SDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFEL 325 (576)
T ss_pred cEEeeccceeeecccCCccc--cHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchHH
Confidence 99999999998764332111 122233468999999999998733 356789999999999999999999754321
Q ss_pred HHHHHHHhhcccchhhccCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCC
Q 003158 726 VREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHT 805 (843)
Q Consensus 726 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~ 805 (843)
. . +.+++ .+|-.=|... +..+.+.|+|.+||.
T Consensus 326 ~-l----------------------------~~KIv-----n~pL~fP~~p--------------e~~e~~kDli~~lL~ 357 (576)
T KOG0585|consen 326 E-L----------------------------FDKIV-----NDPLEFPENP--------------EINEDLKDLIKRLLE 357 (576)
T ss_pred H-H----------------------------HHHHh-----cCcccCCCcc--------------cccHHHHHHHHHHhh
Confidence 1 0 11111 1222223222 233445578999999
Q ss_pred CCCCCCCCCccCCCCCcccCCCCC
Q 003158 806 SKEETPPSSSSMLKHPYVSSDVSG 829 (843)
Q Consensus 806 ~dp~~R~sa~e~L~Hp~f~~~~~~ 829 (843)
-||+.|++..++..|||.+.+..+
T Consensus 358 KdP~~Ri~l~~ik~Hpwvt~~g~~ 381 (576)
T KOG0585|consen 358 KDPEQRITLPDIKLHPWVTRDGDS 381 (576)
T ss_pred cChhheeehhhheecceeccCCCC
Confidence 999999999999999999887553
No 47
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=9.5e-41 Score=364.27 Aligned_cols=195 Identities=26% Similarity=0.342 Sum_probs=169.2
Q ss_pred CcccccCCeeEEEEEeC-CCcEEEEEEeccCCh---hhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEEecCCCC
Q 003158 517 TQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNG 592 (843)
Q Consensus 517 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e~~~~g 592 (843)
+.||+|+||.||+|... +|+.||+|++..... .....+.+|++++++++||||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~ 80 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCC
Confidence 36899999999999964 789999999875322 22356788999999999999999999999999999999999999
Q ss_pred CHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCCCCccc
Q 003158 593 TLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVP 672 (843)
Q Consensus 593 sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~ 672 (843)
+|.+++... ..+++..+..++.||+.||+|||+.+ |+||||||+||+++.++.+||+|||+++.....
T Consensus 81 ~L~~~l~~~--~~~~~~~~~~~~~qi~~~L~~lH~~~---ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~------- 148 (323)
T cd05571 81 ELFFHLSRE--RVFSEDRARFYGAEIVSALGYLHSCD---VVYRDLKLENLMLDKDGHIKITDFGLCKEGISD------- 148 (323)
T ss_pred cHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCC---eEeCCCCHHHEEECCCCCEEEeeCCCCcccccC-------
Confidence 999998654 35889999999999999999999999 999999999999999999999999998753211
Q ss_pred ceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCc
Q 003158 673 AHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 723 (843)
Q Consensus 673 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~ 723 (843)
........||+.|+|||++.+..++.++||||+||++|||++|+.||....
T Consensus 149 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~ 199 (323)
T cd05571 149 GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD 199 (323)
T ss_pred CCcccceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCC
Confidence 111234569999999999999999999999999999999999999997543
No 48
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00 E-value=2.8e-40 Score=355.11 Aligned_cols=278 Identities=24% Similarity=0.365 Sum_probs=207.3
Q ss_pred cCCCCCCcccccCCeeEEEEEeC--CCcEEEEEEeccCChh--hHHHHHHHHHHHHhc---cCCcccceeeeee-----c
Q 003158 511 NNFNSSTQIGQGGYGKVYKGILP--DGTVVAVKRAQEGSLQ--GEKEFLTEIQFLSRL---HHRNLVSLVGYCD-----E 578 (843)
Q Consensus 511 ~~~~~~~~lg~G~~g~Vy~~~~~--~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l---~h~nIv~l~~~~~-----~ 578 (843)
++|++.+.||+|+||+||+|... +++.||+|++...... ....+.+|+.+++.+ +||||++++++|. .
T Consensus 1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~ 80 (290)
T cd07862 1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR 80 (290)
T ss_pred CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCC
Confidence 37889999999999999999863 4788999988743222 234566777777665 6999999999885 3
Q ss_pred CCcEEEEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccc
Q 003158 579 EGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGL 658 (843)
Q Consensus 579 ~~~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGl 658 (843)
....++||||++ ++|.+++.......+++..++.++.|++.||+|||+++ |+||||||+|||+++++.+||+|||+
T Consensus 81 ~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~---iiH~dlkp~Nil~~~~~~~kl~Dfg~ 156 (290)
T cd07862 81 ETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFGL 156 (290)
T ss_pred CCcEEEEEccCC-CCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHHHEEEcCCCCEEEccccc
Confidence 456899999995 69999997765566899999999999999999999999 99999999999999999999999999
Q ss_pred cccCCCCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccc
Q 003158 659 SRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMM 738 (843)
Q Consensus 659 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~ 738 (843)
++..... .......|++.|+|||.+.+..++.++|||||||++|||++|+.||....+... ...
T Consensus 157 ~~~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~-~~~------- 220 (290)
T cd07862 157 ARIYSFQ--------MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQ-LGK------- 220 (290)
T ss_pred eEeccCC--------cccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHHH-HHH-------
Confidence 9765322 112345689999999999988999999999999999999999999976543221 111
Q ss_pred hhhccCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCCCCccCC
Q 003158 739 FSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSML 818 (843)
Q Consensus 739 ~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~sa~e~L 818 (843)
+++......+.+++... .+...++...+.. ...+ ..+..+....+++.+||+.||++|||+.|+|
T Consensus 221 --i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~--~~~~----------~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l 285 (290)
T cd07862 221 --ILDVIGLPGEEDWPRDV-ALPRQAFHSKSAQ--PIEK----------FVTDIDELGKDLLLKCLTFNPAKRISAYSAL 285 (290)
T ss_pred --HHHHhCCCChhhchhhh-cccchhccCCCCC--CHHH----------HccCCCHHHHHHHHHHhccCchhcCCHHHHh
Confidence 11111111122222211 1222222222211 1111 2234455567899999999999999999999
Q ss_pred CCCcc
Q 003158 819 KHPYV 823 (843)
Q Consensus 819 ~Hp~f 823 (843)
+||||
T Consensus 286 ~hp~f 290 (290)
T cd07862 286 SHPYF 290 (290)
T ss_pred cCCCC
Confidence 99998
No 49
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=2.9e-40 Score=354.42 Aligned_cols=284 Identities=21% Similarity=0.278 Sum_probs=209.3
Q ss_pred cCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCCh--hhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEEe
Q 003158 511 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 587 (843)
Q Consensus 511 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e 587 (843)
++|++.+.||+|+||+||+|+.. +++.||+|++..... ...+.+.+|+++++.++||||+++++++..++..++|||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFE 80 (287)
T ss_pred CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEe
Confidence 47889999999999999999975 688999999875322 234578899999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCC
Q 003158 588 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 667 (843)
Q Consensus 588 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~ 667 (843)
|++++.+..+... ...+++..++.++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||++.......
T Consensus 81 ~~~~~~l~~~~~~--~~~~~~~~~~~~~~qi~~~L~~lH~~~---i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~- 154 (287)
T cd07848 81 YVEKNMLELLEEM--PNGVPPEKVRSYIYQLIKAIHWCHKND---IVHRDIKPENLLISHNDVLKLCDFGFARNLSEGS- 154 (287)
T ss_pred cCCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCcEEEeeccCcccccccc-
Confidence 9998777655432 345888999999999999999999998 9999999999999999999999999998654221
Q ss_pred CCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhccCCCC
Q 003158 668 EGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMG 747 (843)
Q Consensus 668 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 747 (843)
........|++.|+|||++.+..++.++|||||||++|||++|+.||............ ....+
T Consensus 155 -----~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~-----------~~~~~ 218 (287)
T cd07848 155 -----NANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTI-----------QKVLG 218 (287)
T ss_pred -----cccccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHH-----------HHhhC
Confidence 11122346899999999999989999999999999999999999999765432211110 01111
Q ss_pred CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCCCCccCCCCCcc
Q 003158 748 SYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYV 823 (843)
Q Consensus 748 ~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~sa~e~L~Hp~f 823 (843)
..+.+....+.. .-.......|........-.. .....+..+.||+++||+.||++|+|++|+|+||||
T Consensus 219 ~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~---~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~hp~f 287 (287)
T cd07848 219 PLPAEQMKLFYS----NPRFHGLRFPAVNHPQSLERR---YLGILSGVLLDLMKNLLKLNPTDRYLTEQCLNHPAF 287 (287)
T ss_pred CCCHHHHHhhhc----cchhcccccCcccCcccHHHh---hhcccCHHHHHHHHHHccCCcccCCCHHHHhcCCCC
Confidence 223222221111 000000011111000000001 112234557799999999999999999999999998
No 50
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=100.00 E-value=4.7e-41 Score=332.22 Aligned_cols=290 Identities=26% Similarity=0.356 Sum_probs=218.3
Q ss_pred HHcCCCCCCcccccCCeeEEEEEeC---C--CcEEEEEEeccCChh--hHHHHHHHHHHHHhccCCcccceeeeeec-CC
Q 003158 509 ATNNFNSSTQIGQGGYGKVYKGILP---D--GTVVAVKRAQEGSLQ--GEKEFLTEIQFLSRLHHRNLVSLVGYCDE-EG 580 (843)
Q Consensus 509 ~~~~~~~~~~lg~G~~g~Vy~~~~~---~--~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~nIv~l~~~~~~-~~ 580 (843)
....|+....||+|.||.||+|... + .+.+|+|.++..... -.....+|+.+++.++||||+.+..++.. +.
T Consensus 22 ~l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~ 101 (438)
T KOG0666|consen 22 DLFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDK 101 (438)
T ss_pred HHHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCc
Confidence 3467889999999999999999643 2 237999999854222 23567899999999999999999999866 78
Q ss_pred cEEEEEecCCCCCHHHHHhhcC---CCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCC----CcEEE
Q 003158 581 EQMLVYEFMSNGTLRDQLSAKS---KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHK----FTAKV 653 (843)
Q Consensus 581 ~~~lV~e~~~~gsL~~~l~~~~---~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~----~~~kl 653 (843)
..++++||.+. +|...|+-++ ...++...++.|..||+.|+.|||++- |+||||||.|||+..+ |.|||
T Consensus 102 ~v~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NW---vlHRDLKPaNIlvmgdgperG~VKI 177 (438)
T KOG0666|consen 102 KVWLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNW---VLHRDLKPANILVMGDGPERGRVKI 177 (438)
T ss_pred eEEEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhh---eeeccCCcceEEEeccCCccCeeEe
Confidence 99999999976 9999886432 246888999999999999999999999 9999999999999877 89999
Q ss_pred eeccccccCCCCCCCCcccceeeeeecccCCccCchhccc-CCCCchhhhHHHHHHHHHHHhCCCCCCCCcch-------
Q 003158 654 ADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNI------- 725 (843)
Q Consensus 654 ~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~------- 725 (843)
+|||+|+.+..+-. +-.....++.|..|+|||.+.+ ..||.+.||||.||++.||+|-.+.|...+..
T Consensus 178 aDlGlaR~~~~plk----pl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pf 253 (438)
T KOG0666|consen 178 ADLGLARLFNNPLK----PLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPF 253 (438)
T ss_pred ecccHHHHhhcccc----ccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccchhhhcccCCCc
Confidence 99999998764421 2223455678999999999998 56899999999999999999987777643211
Q ss_pred -HHHHHHHhhcccchhhccCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH----------HHHhhhhCCCCCC
Q 003158 726 -VREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRE----------LESIWNMMPESDT 794 (843)
Q Consensus 726 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~----------L~~~~~~~~~~~~ 794 (843)
.+++.+++ ++ ++.+.++.++.+. +-|.....+.. |-.+.......++
T Consensus 254 q~dQl~rIf------~v----LG~Pt~~~Wp~lk------------k~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~ 311 (438)
T KOG0666|consen 254 QHDQLDRIF------EV----LGTPTDKDWPDLK------------KMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDP 311 (438)
T ss_pred hHHHHHHHH------HH----cCCCccccchhhh------------hCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCc
Confidence 12222211 11 1222222222221 11222222222 2233444455667
Q ss_pred CCCccccCCCCCCCCCCCCCccCCCCCcccCCCC
Q 003158 795 KTPEFINSEHTSKEETPPSSSSMLKHPYVSSDVS 828 (843)
Q Consensus 795 ~~~dll~~~L~~dp~~R~sa~e~L~Hp~f~~~~~ 828 (843)
++.|++.+||++||.+|+||+|||+|+||+.|.-
T Consensus 312 ~a~~LL~klL~yDP~kRIta~qAleh~yF~~d~l 345 (438)
T KOG0666|consen 312 SALDLLQKLLTYDPIKRITAEQALEHPYFTEDPL 345 (438)
T ss_pred hHHHHHHHHhccCchhhccHHHHhcccccccCCC
Confidence 7899999999999999999999999999998844
No 51
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=3.5e-40 Score=356.78 Aligned_cols=289 Identities=22% Similarity=0.324 Sum_probs=210.0
Q ss_pred HcCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCChh-hHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEEe
Q 003158 510 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ-GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 587 (843)
Q Consensus 510 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e 587 (843)
.++|++.+.||+|+||+||+|... +++.||+|++...... ....+.+|+++++.++||||+++++++.+++..++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 83 (303)
T cd07869 4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFE 83 (303)
T ss_pred cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEEE
Confidence 468999999999999999999975 6899999998753322 23467889999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCC
Q 003158 588 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 667 (843)
Q Consensus 588 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~ 667 (843)
|++ ++|.+++... ...+++..+..++.|++.||+|||+++ |+||||||+||++++++.+||+|||+++......
T Consensus 84 ~~~-~~l~~~~~~~-~~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~- 157 (303)
T cd07869 84 YVH-TDLCQYMDKH-PGGLHPENVKLFLFQLLRGLSYIHQRY---ILHRDLKPQNLLISDTGELKLADFGLARAKSVPS- 157 (303)
T ss_pred CCC-cCHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEECCCCcceeccCCC-
Confidence 995 6888888653 345788889999999999999999999 9999999999999999999999999987543211
Q ss_pred CCcccceeeeeecccCCccCchhccc-CCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhccCCC
Q 003158 668 EGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNM 746 (843)
Q Consensus 668 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 746 (843)
.......+++.|+|||++.+ ..++.++||||+||++|||++|+.||....+........... .
T Consensus 158 ------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~------~---- 221 (303)
T cd07869 158 ------HTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLV------L---- 221 (303)
T ss_pred ------ccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHH------h----
Confidence 11233457899999999876 458889999999999999999999998655443333221110 0
Q ss_pred CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCCCCccCCCCCcccCC
Q 003158 747 GSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSSD 826 (843)
Q Consensus 747 ~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~sa~e~L~Hp~f~~~ 826 (843)
+......+....... ....+.....+...+.+... . ......+.||+++||+.||++|+|++|+|+||||+..
T Consensus 222 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~----~-~~~~~~~~dli~~mL~~dp~~R~s~~~~l~h~~f~~~ 294 (303)
T cd07869 222 GTPNEDTWPGVHSLP--HFKPERFTLYSPKNLRQAWN----K-LSYVNHAEDLASKLLQCFPKNRLSAQAALSHEYFSDL 294 (303)
T ss_pred CCCChhhccchhhcc--ccccccccccCCccHHHHhh----c-cCCChHHHHHHHHHhccCchhccCHHHHhcCcccccC
Confidence 000000000000000 00000000001111111111 1 1123455689999999999999999999999999874
Q ss_pred C
Q 003158 827 V 827 (843)
Q Consensus 827 ~ 827 (843)
.
T Consensus 295 ~ 295 (303)
T cd07869 295 P 295 (303)
T ss_pred C
Confidence 3
No 52
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=3.2e-40 Score=358.43 Aligned_cols=192 Identities=29% Similarity=0.405 Sum_probs=167.8
Q ss_pred ccccCCeeEEEEEeC-CCcEEEEEEeccCC---hhhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEEecCCCCCH
Q 003158 519 IGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTL 594 (843)
Q Consensus 519 lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e~~~~gsL 594 (843)
||+|+||.||+|... +++.||+|++.... ......+.+|++++++++||||+++++++.+.+..++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L 80 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL 80 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence 699999999999965 58899999987432 22345678899999999999999999999999999999999999999
Q ss_pred HHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCCCCcccce
Q 003158 595 RDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAH 674 (843)
Q Consensus 595 ~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~ 674 (843)
.+++... ..+++..+..++.|+++||.|||+++ |+||||||+||+++.++.+||+|||+++...... .
T Consensus 81 ~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~---i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~-------~ 148 (312)
T cd05585 81 FHHLQRE--GRFDLSRARFYTAELLCALENLHKFN---VIYRDLKPENILLDYQGHIALCDFGLCKLNMKDD-------D 148 (312)
T ss_pred HHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCC---eEeCCCCHHHeEECCCCcEEEEECcccccCccCC-------C
Confidence 9999764 35888999999999999999999999 9999999999999999999999999997542211 1
Q ss_pred eeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCC
Q 003158 675 VSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 722 (843)
Q Consensus 675 ~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~ 722 (843)
......||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 149 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~ 196 (312)
T cd05585 149 KTNTFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDE 196 (312)
T ss_pred ccccccCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCC
Confidence 123456899999999999999999999999999999999999999754
No 53
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2e-40 Score=361.31 Aligned_cols=270 Identities=31% Similarity=0.489 Sum_probs=223.4
Q ss_pred ccHHHHHHHHcCCCCCCcccccCCeeEEEEEeC--CC--cE-EEEEEeccC---ChhhHHHHHHHHHHHHhccCCcccce
Q 003158 501 FTYGEMALATNNFNSSTQIGQGGYGKVYKGILP--DG--TV-VAVKRAQEG---SLQGEKEFLTEIQFLSRLHHRNLVSL 572 (843)
Q Consensus 501 ~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~--~~--~~-vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~nIv~l 572 (843)
+..+.|++..++-...++||+|+||.||+|.+. ++ .. ||||..+.. .....++|.+|+++|+.++|||||++
T Consensus 147 I~r~~Wel~H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~ 226 (474)
T KOG0194|consen 147 IPRQKWELSHSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRF 226 (474)
T ss_pred ccccccEEeccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEE
Confidence 344556666667777799999999999999964 23 23 899998852 34556889999999999999999999
Q ss_pred eeeeecCCcEEEEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEE
Q 003158 573 VGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAK 652 (843)
Q Consensus 573 ~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~k 652 (843)
+|++..+..+++|||+|.||+|.++|++... .++..++..++.++|+||+|||+++ +|||||.++|||++.++.+|
T Consensus 227 yGVa~~~~Pl~ivmEl~~gGsL~~~L~k~~~-~v~~~ek~~~~~~AA~Gl~YLh~k~---~IHRDIAARNcL~~~~~~vK 302 (474)
T KOG0194|consen 227 YGVAVLEEPLMLVMELCNGGSLDDYLKKNKK-SLPTLEKLRFCYDAARGLEYLHSKN---CIHRDIAARNCLYSKKGVVK 302 (474)
T ss_pred EEEEcCCCccEEEEEecCCCcHHHHHHhCCC-CCCHHHHHHHHHHHHhHHHHHHHCC---CcchhHhHHHheecCCCeEE
Confidence 9999999999999999999999999987654 6899999999999999999999999 99999999999999999999
Q ss_pred EeeccccccCCCCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHh-CCCCCCCCcchHHHHHH
Q 003158 653 VADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNI 731 (843)
Q Consensus 653 l~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~ellt-g~~pf~~~~~~~~~~~~ 731 (843)
|+|||+++....-. .......-...|+|||.+....+++++|||||||++||+++ |..||....... +.
T Consensus 303 ISDFGLs~~~~~~~-------~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~--v~- 372 (474)
T KOG0194|consen 303 ISDFGLSRAGSQYV-------MKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNYE--VK- 372 (474)
T ss_pred eCccccccCCccee-------eccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHHH--HH-
Confidence 99999987643100 00111234578999999999999999999999999999999 888998665421 11
Q ss_pred Hhhcccchhh-ccCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCC
Q 003158 732 AYQSSMMFSV-IDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPE 791 (843)
Q Consensus 732 ~~~~~~~~~~-~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~ 791 (843)
..+ ..+.+...|...+..+..++.+||..+|+.||+|.++.+.++.+......
T Consensus 373 -------~kI~~~~~r~~~~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~l~~~~~~~~~ 426 (474)
T KOG0194|consen 373 -------AKIVKNGYRMPIPSKTPKELAKVMKQCWKKDPEDRPTMSTIKKKLEALEKKKEA 426 (474)
T ss_pred -------HHHHhcCccCCCCCCCHHHHHHHHHHhccCChhhccCHHHHHHHHHHHHhcccc
Confidence 122 33444566778889999999999999999999999999999998876543
No 54
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=5.3e-40 Score=359.73 Aligned_cols=296 Identities=22% Similarity=0.371 Sum_probs=223.4
Q ss_pred HHcCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCCh-hhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEE
Q 003158 509 ATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 586 (843)
Q Consensus 509 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~ 586 (843)
..++|++.+.||+|+||.||+|... ++..+|+|.+..... ...+.+.+|+++++.++|+||++++++|.+++..++||
T Consensus 3 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 82 (333)
T cd06650 3 KDDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICM 82 (333)
T ss_pred chhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEE
Confidence 3578999999999999999999975 688999998875422 33467899999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcC-CCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCC
Q 003158 587 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTE-ADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVP 665 (843)
Q Consensus 587 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~-~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~ 665 (843)
||+++|+|.+++.... .+++..+..++.|++.||.|||+. + |+||||||+|||+++++.+||+|||++......
T Consensus 83 e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~l~~~l~~lH~~~~---ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~ 157 (333)
T cd06650 83 EHMDGGSLDQVLKKAG--RIPEQILGKVSIAVIKGLTYLREKHK---IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS 157 (333)
T ss_pred ecCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhcCC---EEecCCChhhEEEcCCCCEEEeeCCcchhhhhh
Confidence 9999999999996543 478888999999999999999974 5 999999999999999999999999998754321
Q ss_pred CCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhccCC
Q 003158 666 DIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGN 745 (843)
Q Consensus 666 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 745 (843)
......|+..|+|||++.+..++.++|||||||++|||++|+.||..... ......... ...+.
T Consensus 158 ---------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~--~~~~~~~~~-----~~~~~ 221 (333)
T cd06650 158 ---------MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDA--KELELMFGC-----PVEGD 221 (333)
T ss_pred ---------ccccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcch--hHHHHHhcC-----cccCC
Confidence 11234688999999999998899999999999999999999999975432 111111110 00000
Q ss_pred CCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCC------CCCCCCccccCCCCCCCCCCCCCccCCC
Q 003158 746 MGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPE------SDTKTPEFINSEHTSKEETPPSSSSMLK 819 (843)
Q Consensus 746 ~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~------~~~~~~dll~~~L~~dp~~R~sa~e~L~ 819 (843)
... .............|....|..||++.. .+....+.+..+. .+....+|+.+||+.||++|||++|++.
T Consensus 222 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~Rpt~~ell~ 298 (333)
T cd06650 222 PAE--SETSPRPRPPGRPLSSYGPDSRPPMAI-FELLDYIVNEPPPKLPSGVFGAEFQDFVNKCLIKNPAERADLKQLMV 298 (333)
T ss_pred ccc--cccCcccCCccchhhhhcccccccccH-HHHHHHHhcCCCccCCCCCcCHHHHHHHHHhccCCcccCcCHHHHhh
Confidence 000 000011112223455567888887643 2222222221111 1233468999999999999999999999
Q ss_pred CCcccCCCC
Q 003158 820 HPYVSSDVS 828 (843)
Q Consensus 820 Hp~f~~~~~ 828 (843)
||||+....
T Consensus 299 h~~~~~~~~ 307 (333)
T cd06650 299 HAFIKRSEA 307 (333)
T ss_pred CHHHhcCcc
Confidence 999987644
No 55
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=100.00 E-value=1.2e-39 Score=349.32 Aligned_cols=274 Identities=23% Similarity=0.336 Sum_probs=211.5
Q ss_pred CCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCChh---hHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEEe
Q 003158 512 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ---GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 587 (843)
Q Consensus 512 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e 587 (843)
+|++.+.||+|+||+||++... +++.||+|++...... ....+.+|+++++.++||||+++++++..++..++|||
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEe
Confidence 4778899999999999999964 6899999998753322 23457889999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCC
Q 003158 588 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 667 (843)
Q Consensus 588 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~ 667 (843)
|+++|+|.+++.......+++..+..++.|++.||.|||+.+ |+||||||+||++++++.++|+|||++.......
T Consensus 81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~- 156 (285)
T cd05605 81 LMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRER---IVYRDLKPENILLDDYGHIRISDLGLAVEIPEGE- 156 (285)
T ss_pred ccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCC---cEecCCCHHHEEECCCCCEEEeeCCCceecCCCC-
Confidence 999999999987655556899999999999999999999999 9999999999999999999999999987653211
Q ss_pred CCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhccCCCC
Q 003158 668 EGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMG 747 (843)
Q Consensus 668 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 747 (843)
......|+..|+|||++.+..++.++||||+||++|||++|+.||........... +...+.....
T Consensus 157 -------~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~~~-------~~~~~~~~~~ 222 (285)
T cd05605 157 -------TIRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKREE-------VERRVKEDQE 222 (285)
T ss_pred -------ccccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhhHHHH-------HHHHhhhccc
Confidence 11234688999999999998999999999999999999999999975432111000 0000111111
Q ss_pred CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCC-----CCccCCCCCc
Q 003158 748 SYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPP-----SSSSMLKHPY 822 (843)
Q Consensus 748 ~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~-----sa~e~L~Hp~ 822 (843)
.++...+..+.+ ++.+|+..||++|+ +++++++|||
T Consensus 223 ~~~~~~~~~~~~---------------------------------------li~~~l~~~P~~R~~~~~~~~~~l~~~~~ 263 (285)
T cd05605 223 EYSEKFSEAARS---------------------------------------ICRQLLTKDPGFRLGCRGEGAEEVKAHPF 263 (285)
T ss_pred ccCcccCHHHHH---------------------------------------HHHHHccCCHHHhcCCCCCCHHHHhcCcC
Confidence 222233333444 45555555555555 8889999999
Q ss_pred ccCCCCCCccccccCCCCCC
Q 003158 823 VSSDVSGSNLVSGVIPTITP 842 (843)
Q Consensus 823 f~~~~~~~~~~~~~~~~~~~ 842 (843)
|..-.+.....+...|++.|
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~ 283 (285)
T cd05605 264 FRTANFKRLEAGMLEPPFCP 283 (285)
T ss_pred ccCCCHHHHhhCCCCCCCCC
Confidence 98866655555556677665
No 56
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=7.4e-40 Score=358.52 Aligned_cols=298 Identities=23% Similarity=0.374 Sum_probs=214.6
Q ss_pred HcCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCCh-hhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEEe
Q 003158 510 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 587 (843)
Q Consensus 510 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e 587 (843)
.++|++.+.||+|+||.||++... ++..||+|.+..... ...+++.+|+++++.++||||+++++++..++..++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 83 (331)
T cd06649 4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 83 (331)
T ss_pred cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEee
Confidence 468999999999999999999965 688999999875432 334678999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCC
Q 003158 588 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 667 (843)
Q Consensus 588 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~ 667 (843)
|+++|+|.+++.... .+++..+..++.|++.||.|||+.+ .|+||||||+||++++++.+||+|||++......
T Consensus 84 ~~~~~~L~~~l~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~--~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-- 157 (331)
T cd06649 84 HMDGGSLDQVLKEAK--RIPEEILGKVSIAVLRGLAYLREKH--QIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS-- 157 (331)
T ss_pred cCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHhhcC--CEEcCCCChhhEEEcCCCcEEEccCccccccccc--
Confidence 999999999996643 4788899999999999999999853 2999999999999999999999999998755321
Q ss_pred CCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhccCCCC
Q 003158 668 EGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMG 747 (843)
Q Consensus 668 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 747 (843)
......|++.|+|||++.+..++.++|||||||++|||++|+.||...... .......... .++...
T Consensus 158 -------~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~--~~~~~~~~~~----~~~~~~ 224 (331)
T cd06649 158 -------MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAK--ELEAIFGRPV----VDGEEG 224 (331)
T ss_pred -------ccccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHhcccc----cccccC
Confidence 122346899999999999999999999999999999999999999654321 1111111000 000000
Q ss_pred CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhC-C-----CCCCCCCccccCCCCCCCCCCCCCccCCCCC
Q 003158 748 SYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMM-P-----ESDTKTPEFINSEHTSKEETPPSSSSMLKHP 821 (843)
Q Consensus 748 ~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~-~-----~~~~~~~dll~~~L~~dp~~R~sa~e~L~Hp 821 (843)
. +.............+....+..+|.+. +...+..+.... + ...+.+.+|+++||+.||++|||++|+++||
T Consensus 225 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h~ 302 (331)
T cd06649 225 E-PHSISPRPRPPGRPVSGHGMDSRPAMA-IFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNHT 302 (331)
T ss_pred C-ccccCcccccccccccccccccccchh-HHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHHHhcCh
Confidence 0 000000000000001111222333332 111122111111 1 1123356899999999999999999999999
Q ss_pred cccCCCC
Q 003158 822 YVSSDVS 828 (843)
Q Consensus 822 ~f~~~~~ 828 (843)
||.....
T Consensus 303 ~~~~~~~ 309 (331)
T cd06649 303 FIKRSEV 309 (331)
T ss_pred HHhhccc
Confidence 9976544
No 57
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.8e-41 Score=328.00 Aligned_cols=257 Identities=25% Similarity=0.420 Sum_probs=207.2
Q ss_pred HcCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCCh----hh----HHHHHHHHHHHHhc-cCCcccceeeeeecC
Q 003158 510 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL----QG----EKEFLTEIQFLSRL-HHRNLVSLVGYCDEE 579 (843)
Q Consensus 510 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~----~~----~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~ 579 (843)
-+.|...+.+|+|..++|.++..+ +|..+|+|++..... +. .+.-.+|+.+|+++ .||+|+++.+++..+
T Consensus 16 y~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes~ 95 (411)
T KOG0599|consen 16 YAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYESD 95 (411)
T ss_pred HhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccCc
Confidence 356788899999999999999854 688999998864221 11 23457899999998 699999999999999
Q ss_pred CcEEEEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeecccc
Q 003158 580 GEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLS 659 (843)
Q Consensus 580 ~~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla 659 (843)
...++|+|.|+.|.|.|++... -.+++...++|+.|+.+|++|||.+. ||||||||+|||+|++.++||+|||.|
T Consensus 96 sF~FlVFdl~prGELFDyLts~--VtlSEK~tR~iMrqlfegVeylHa~~---IVHRDLKpENILlddn~~i~isDFGFa 170 (411)
T KOG0599|consen 96 AFVFLVFDLMPRGELFDYLTSK--VTLSEKETRRIMRQLFEGVEYLHARN---IVHRDLKPENILLDDNMNIKISDFGFA 170 (411)
T ss_pred chhhhhhhhcccchHHHHhhhh--eeecHHHHHHHHHHHHHHHHHHHHhh---hhhcccChhheeeccccceEEecccee
Confidence 9999999999999999999653 45899999999999999999999999 999999999999999999999999999
Q ss_pred ccCCCCCCCCcccceeeeeecccCCccCchhccc------CCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHh
Q 003158 660 RLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT------HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAY 733 (843)
Q Consensus 660 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~ 733 (843)
+.++. .......+|||+|+|||.+.. ..|+...|+||.||++|.|+.|.+||.+.....
T Consensus 171 ~~l~~--------GekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQml------- 235 (411)
T KOG0599|consen 171 CQLEP--------GEKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQML------- 235 (411)
T ss_pred eccCC--------chhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHHHH-------
Confidence 98764 344567889999999999964 357888999999999999999999997543211
Q ss_pred hcccchhhccCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCCC
Q 003158 734 QSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPS 813 (843)
Q Consensus 734 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~s 813 (843)
.+..+..+.. ++.. | .+.+.+...+|++.++|+.||++|+|
T Consensus 236 ---MLR~ImeGky-qF~s---------------------p--------------eWadis~~~KdLIsrlLqVdp~~Rit 276 (411)
T KOG0599|consen 236 ---MLRMIMEGKY-QFRS---------------------P--------------EWADISATVKDLISRLLQVDPTKRIT 276 (411)
T ss_pred ---HHHHHHhccc-ccCC---------------------c--------------chhhccccHHHHHHHHHeeCchhccc
Confidence 0001111110 1100 1 11223455678999999999999999
Q ss_pred CccCCCCCcccC
Q 003158 814 SSSMLKHPYVSS 825 (843)
Q Consensus 814 a~e~L~Hp~f~~ 825 (843)
++|+|.||||..
T Consensus 277 ake~LaHpff~q 288 (411)
T KOG0599|consen 277 AKEALAHPFFIQ 288 (411)
T ss_pred HHHHhcChHHHH
Confidence 999999999954
No 58
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=100.00 E-value=1.7e-39 Score=347.13 Aligned_cols=195 Identities=25% Similarity=0.400 Sum_probs=168.0
Q ss_pred ccccCCeeEEEEEeC-CCcEEEEEEeccCChh---hHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEEecCCCCCH
Q 003158 519 IGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ---GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTL 594 (843)
Q Consensus 519 lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e~~~~gsL 594 (843)
||+|+||+||++... +++.||+|.+...... ..+.+..|+++++.++|+||+++.+++......++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L 80 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL 80 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence 699999999999964 6899999998753322 234677899999999999999999999999999999999999999
Q ss_pred HHHHhhc--CCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCCCCccc
Q 003158 595 RDQLSAK--SKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVP 672 (843)
Q Consensus 595 ~~~l~~~--~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~ 672 (843)
.+++... ....+++..++.++.||+.||+|||+.+ |+||||||+||++++++.+||+|||++.......
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~------ 151 (280)
T cd05608 81 RYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRR---IIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQ------ 151 (280)
T ss_pred HHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEeeCccceecCCCC------
Confidence 9887542 3346889999999999999999999999 9999999999999999999999999997654321
Q ss_pred ceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCc
Q 003158 673 AHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 723 (843)
Q Consensus 673 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~ 723 (843)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 152 -~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~ 201 (280)
T cd05608 152 -SKTKGYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARG 201 (280)
T ss_pred -ccccccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCC
Confidence 11223468999999999999999999999999999999999999997543
No 59
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-40 Score=344.78 Aligned_cols=250 Identities=26% Similarity=0.387 Sum_probs=214.8
Q ss_pred HcCCCCCCcccccCCeeEEEEEe-CCCcEEEEEEeccCChhh-HHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEEe
Q 003158 510 TNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQG-EKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 587 (843)
Q Consensus 510 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e 587 (843)
...|+..+.||+|.||.||+|.. ..++.||+|++....... ..++++|+.++..++++||.++||.+..+..+|++||
T Consensus 12 ~~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMe 91 (467)
T KOG0201|consen 12 ELLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIME 91 (467)
T ss_pred ccccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHH
Confidence 34677789999999999999996 468999999998654443 4688999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCC
Q 003158 588 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 667 (843)
Q Consensus 588 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~ 667 (843)
||.||++.+.++.. ..+.+..+..|.++++.||.|||+++ .+|||||+.|||+..+|.+|++|||.+..+....
T Consensus 92 y~~gGsv~~lL~~~--~~~~E~~i~~ilre~l~~l~ylH~~~---kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~- 165 (467)
T KOG0201|consen 92 YCGGGSVLDLLKSG--NILDEFEIAVILREVLKGLDYLHSEK---KIHRDIKAANILLSESGDVKLADFGVAGQLTNTV- 165 (467)
T ss_pred HhcCcchhhhhccC--CCCccceeeeehHHHHHHhhhhhhcc---eecccccccceeEeccCcEEEEecceeeeeechh-
Confidence 99999999999653 33577788889999999999999999 9999999999999999999999999997765432
Q ss_pred CCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhccCCCC
Q 003158 668 EGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMG 747 (843)
Q Consensus 668 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 747 (843)
......+||+.|||||++.+..|+.++||||||++.+||.+|.+|+..... ...++.+.....+
T Consensus 166 ------~rr~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hP----------mrvlflIpk~~PP 229 (467)
T KOG0201|consen 166 ------KRRKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHP----------MRVLFLIPKSAPP 229 (467)
T ss_pred ------hccccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCc----------ceEEEeccCCCCC
Confidence 223567899999999999999999999999999999999999999976542 2334444444455
Q ss_pred CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 003158 748 SYPSECVEKFIKLALKCCQDETDARPSMSEVMRE 781 (843)
Q Consensus 748 ~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~ 781 (843)
.....+...+.+++..|++++|+.||++.+++++
T Consensus 230 ~L~~~~S~~~kEFV~~CL~k~P~~RpsA~~LLKh 263 (467)
T KOG0201|consen 230 RLDGDFSPPFKEFVEACLDKNPEFRPSAKELLKH 263 (467)
T ss_pred ccccccCHHHHHHHHHHhhcCcccCcCHHHHhhh
Confidence 5666888999999999999999999999999854
No 60
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=9.8e-40 Score=356.17 Aligned_cols=234 Identities=23% Similarity=0.290 Sum_probs=186.0
Q ss_pred CcccccCCeeEEEEEeC-CCcEEEEEEeccCCh---hhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEEecCCCC
Q 003158 517 TQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNG 592 (843)
Q Consensus 517 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e~~~~g 592 (843)
+.||+|+||.||++... +|+.||+|++..... .....+.+|+++++.++||||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCC
Confidence 36899999999999964 689999999875322 22356778999999999999999999999999999999999999
Q ss_pred CHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCCCCccc
Q 003158 593 TLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVP 672 (843)
Q Consensus 593 sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~ 672 (843)
+|.+++.... .+++..++.++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++......
T Consensus 81 ~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~------ 149 (323)
T cd05595 81 ELFFHLSRER--VFTEERARFYGAEIVSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG------ 149 (323)
T ss_pred cHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHEEEcCCCCEEecccHHhccccCCC------
Confidence 9999886543 5889999999999999999999999 9999999999999999999999999987532211
Q ss_pred ceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhccCCCCCCCHH
Q 003158 673 AHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSE 752 (843)
Q Consensus 673 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 752 (843)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||....... ..... . .....+|..
T Consensus 150 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~-~~~~~---------~-~~~~~~p~~ 217 (323)
T cd05595 150 -ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHER-LFELI---------L-MEEIRFPRT 217 (323)
T ss_pred -CccccccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHHH-HHHHH---------h-cCCCCCCCC
Confidence 11233568999999999999999999999999999999999999997544211 11110 0 011123344
Q ss_pred HHHHHHHHHHHhcccCCCCCC
Q 003158 753 CVEKFIKLALKCCQDETDARP 773 (843)
Q Consensus 753 ~~~~l~~l~~~c~~~~p~~RP 773 (843)
+++++.+++.+|++.+|.+|+
T Consensus 218 ~~~~~~~li~~~L~~dP~~R~ 238 (323)
T cd05595 218 LSPEAKSLLAGLLKKDPKQRL 238 (323)
T ss_pred CCHHHHHHHHHHccCCHHHhC
Confidence 455666666666666666665
No 61
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=1e-39 Score=356.76 Aligned_cols=234 Identities=24% Similarity=0.294 Sum_probs=185.9
Q ss_pred CcccccCCeeEEEEEeC-CCcEEEEEEeccCC---hhhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEEecCCCC
Q 003158 517 TQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNG 592 (843)
Q Consensus 517 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e~~~~g 592 (843)
+.||+|+||.||++... +++.||+|++.... ......+.+|+++++.++||||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g 80 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGG 80 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCC
Confidence 36899999999999964 68999999987532 223457788999999999999999999999999999999999999
Q ss_pred CHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCCCCccc
Q 003158 593 TLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVP 672 (843)
Q Consensus 593 sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~ 672 (843)
+|.+++... ..+++..+..++.||+.||+|||+++ |+||||||+|||+++++.+||+|||+++.....
T Consensus 81 ~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~------- 148 (328)
T cd05593 81 ELFFHLSRE--RVFSEDRTRFYGAEIVSALDYLHSGK---IVYRDLKLENLMLDKDGHIKITDFGLCKEGITD------- 148 (328)
T ss_pred CHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCC---eEecccCHHHeEECCCCcEEEecCcCCccCCCc-------
Confidence 999988654 35889999999999999999999999 999999999999999999999999998753211
Q ss_pred ceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhccCCCCCCCHH
Q 003158 673 AHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSE 752 (843)
Q Consensus 673 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 752 (843)
........||+.|+|||++.+..++.++|||||||++|||++|+.||...... ..... +......+|..
T Consensus 149 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~-~~~~~----------~~~~~~~~p~~ 217 (328)
T cd05593 149 AATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE-KLFEL----------ILMEDIKFPRT 217 (328)
T ss_pred ccccccccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHH-HHHHH----------hccCCccCCCC
Confidence 11123356899999999999999999999999999999999999999754321 11111 11111123344
Q ss_pred HHHHHHHHHHHhcccCCCCCC
Q 003158 753 CVEKFIKLALKCCQDETDARP 773 (843)
Q Consensus 753 ~~~~l~~l~~~c~~~~p~~RP 773 (843)
.+.++.+++.+|+..+|.+|+
T Consensus 218 ~~~~~~~li~~~L~~dP~~R~ 238 (328)
T cd05593 218 LSADAKSLLSGLLIKDPNKRL 238 (328)
T ss_pred CCHHHHHHHHHHcCCCHHHcC
Confidence 455566666666666666664
No 62
>PTZ00284 protein kinase; Provisional
Probab=100.00 E-value=1.3e-39 Score=373.17 Aligned_cols=296 Identities=22% Similarity=0.308 Sum_probs=208.7
Q ss_pred HHHHHHcCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCChhhHHHHHHHHHHHHhccC------Ccccceeeeee
Q 003158 505 EMALATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHH------RNLVSLVGYCD 577 (843)
Q Consensus 505 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h------~nIv~l~~~~~ 577 (843)
++...+++|++.+.||+|+||+||+|... .++.||||+++... ....++..|+++++.++| .+++++++++.
T Consensus 123 ~~~~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~ 201 (467)
T PTZ00284 123 DIDVSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP-KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQ 201 (467)
T ss_pred ccccCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch-hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEE
Confidence 34445688999999999999999999964 68899999986422 223455667777777754 45888999886
Q ss_pred cC-CcEEEEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhc-CCCCCEEeccCCCCcEEEcCCC------
Q 003158 578 EE-GEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHT-EADPPVFHRDIKASNILLDHKF------ 649 (843)
Q Consensus 578 ~~-~~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~-~~~~~iiH~Dlkp~NILl~~~~------ 649 (843)
.+ ++.++|||++ +++|.+++.+. ..+++..+..|+.||+.||+|||+ .+ ||||||||+|||++.++
T Consensus 202 ~~~~~~~iv~~~~-g~~l~~~l~~~--~~l~~~~~~~i~~qi~~aL~yLH~~~g---IiHrDlKP~NILl~~~~~~~~~~ 275 (467)
T PTZ00284 202 NETGHMCIVMPKY-GPCLLDWIMKH--GPFSHRHLAQIIFQTGVALDYFHTELH---LMHTDLKPENILMETSDTVVDPV 275 (467)
T ss_pred cCCceEEEEEecc-CCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhcCC---eecCCCCHHHEEEecCCcccccc
Confidence 54 5789999998 78999988654 358899999999999999999997 47 99999999999998765
Q ss_pred ----------cEEEeeccccccCCCCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCC
Q 003158 650 ----------TAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPI 719 (843)
Q Consensus 650 ----------~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf 719 (843)
.+||+|||.+.... .......||+.|+|||++.+..++.++|||||||++|||++|+.||
T Consensus 276 ~~~~~~~~~~~vkl~DfG~~~~~~----------~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf 345 (467)
T PTZ00284 276 TNRALPPDPCRVRICDLGGCCDER----------HSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLY 345 (467)
T ss_pred cccccCCCCceEEECCCCccccCc----------cccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCC
Confidence 49999999876432 1123457899999999999999999999999999999999999999
Q ss_pred CCCcchHHHHHHHhhcccchhhccCCCCCCCHHHHHHH-HHHHHHhcccCCCCCCCH--HHHHHHHHHhhhhCCCCCCCC
Q 003158 720 SHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKF-IKLALKCCQDETDARPSM--SEVMRELESIWNMMPESDTKT 796 (843)
Q Consensus 720 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~l~~~c~~~~p~~RPs~--~~vl~~L~~~~~~~~~~~~~~ 796 (843)
....... .+.. +....+.+|.++.... .+....++......+|.. ..+..............++.+
T Consensus 346 ~~~~~~~-~~~~----------i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (467)
T PTZ00284 346 DTHDNLE-HLHL----------MEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLL 414 (467)
T ss_pred CCCChHH-HHHH----------HHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHH
Confidence 7654321 1111 1112233343332211 000111111111112211 111111100000001123456
Q ss_pred CccccCCCCCCCCCCCCCccCCCCCcccCCCC
Q 003158 797 PEFINSEHTSKEETPPSSSSMLKHPYVSSDVS 828 (843)
Q Consensus 797 ~dll~~~L~~dp~~R~sa~e~L~Hp~f~~~~~ 828 (843)
.|||.+||++||++|+||+|+|+||||...-.
T Consensus 415 ~dli~~mL~~dP~~R~ta~e~L~Hp~~~~~~~ 446 (467)
T PTZ00284 415 CDLIYGLLHYDRQKRLNARQMTTHPYVLKYYP 446 (467)
T ss_pred HHHHHHhCCcChhhCCCHHHHhcCccccccCC
Confidence 79999999999999999999999999987544
No 63
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=100.00 E-value=2.8e-39 Score=359.96 Aligned_cols=285 Identities=23% Similarity=0.362 Sum_probs=215.6
Q ss_pred CCCCCCcccccCCeeEEEEEe-CCCcEEEEEEeccC--ChhhHHHHHHHHHHHHhccCCcccceeeeeecCC-----cEE
Q 003158 512 NFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEG--SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEG-----EQM 583 (843)
Q Consensus 512 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~-----~~~ 583 (843)
+|++.+.||+|+||+||+|.. .+++.||+|++... .....+++.+|+++++.++|+||+++++++...+ ..+
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 80 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIY 80 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEE
Confidence 478889999999999999996 47899999998643 2234567889999999999999999999997766 789
Q ss_pred EEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCC
Q 003158 584 LVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAP 663 (843)
Q Consensus 584 lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~ 663 (843)
+||||+. ++|.+++... ..+++..++.++.||+.||.|||+.+ |+||||||+|||+++++.+||+|||+++...
T Consensus 81 lv~e~~~-~~l~~~~~~~--~~l~~~~~~~~~~qi~~aL~~LH~~~---ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~~ 154 (372)
T cd07853 81 VVTELMQ-SDLHKIIVSP--QPLSSDHVKVFLYQILRGLKYLHSAG---ILHRDIKPGNLLVNSNCVLKICDFGLARVEE 154 (372)
T ss_pred EEeeccc-cCHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChHHEEECCCCCEEeccccceeecc
Confidence 9999996 6888887543 35889999999999999999999999 9999999999999999999999999998654
Q ss_pred CCCCCCcccceeeeeecccCCccCchhcccC-CCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhc
Q 003158 664 VPDIEGIVPAHVSTVVKGTPGYLDPEYFLTH-KLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVI 742 (843)
Q Consensus 664 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 742 (843)
... ........++..|+|||++.+. .++.++||||+||++|||++|+.||...... +......
T Consensus 155 ~~~------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-~~~~~i~--------- 218 (372)
T cd07853 155 PDE------SKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPI-QQLDLIT--------- 218 (372)
T ss_pred cCc------cccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHH-HHHHHHH---------
Confidence 221 1112334578899999999874 5789999999999999999999999765432 2222111
Q ss_pred cCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCCCCccCCCCCc
Q 003158 743 DGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPY 822 (843)
Q Consensus 743 ~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~sa~e~L~Hp~ 822 (843)
...+..+.+......+-....+...+...|....+. ......+..+.+|+.+||.+||++|+|++|+|+|||
T Consensus 219 -~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~ 290 (372)
T cd07853 219 -DLLGTPSLEAMRSACEGARAHILRGPHKPPSLPVLY-------TLSSQATHEAVHLLCRMLVFDPDKRISAADALAHPY 290 (372)
T ss_pred -HHcCCCCHHHHHHhhHHHHHHHHhCCCCCCchHHhc-------ccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcCHh
Confidence 111222222222222222333334455555433221 122334556778999999999999999999999999
Q ss_pred ccCC
Q 003158 823 VSSD 826 (843)
Q Consensus 823 f~~~ 826 (843)
|.+.
T Consensus 291 ~~~~ 294 (372)
T cd07853 291 LDEG 294 (372)
T ss_pred hCCC
Confidence 9873
No 64
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00 E-value=1.2e-39 Score=355.08 Aligned_cols=195 Identities=27% Similarity=0.420 Sum_probs=167.1
Q ss_pred CcccccCCeeEEEEEeC-CCcEEEEEEeccCC---hhhHHHHHHHHHHHHhc-cCCcccceeeeeecCCcEEEEEecCCC
Q 003158 517 TQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQMLVYEFMSN 591 (843)
Q Consensus 517 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~lV~e~~~~ 591 (843)
+.||+|+||+||+|+.. +++.||+|++.... ....+.+..|..++..+ +||||+++++++...+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~ 80 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG 80 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence 36899999999999965 68999999987532 12235667888888876 699999999999999999999999999
Q ss_pred CCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCCCCcc
Q 003158 592 GTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIV 671 (843)
Q Consensus 592 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~ 671 (843)
|+|.+++.... .+++..+..++.|++.||+|||+++ |+||||||+|||+++++.+||+|||+++.....
T Consensus 81 g~L~~~i~~~~--~l~~~~~~~~~~ql~~~L~~lH~~~---ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~------ 149 (320)
T cd05590 81 GDLMFHIQKSR--RFDEARARFYAAEITSALMFLHDKG---IIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFN------ 149 (320)
T ss_pred chHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCCHHHeEECCCCcEEEeeCCCCeecCcC------
Confidence 99999986543 4888999999999999999999999 999999999999999999999999998753211
Q ss_pred cceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCc
Q 003158 672 PAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 723 (843)
Q Consensus 672 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~ 723 (843)
........||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 150 -~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~ 200 (320)
T cd05590 150 -GKTTSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAEN 200 (320)
T ss_pred -CCcccccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCC
Confidence 112234568999999999999999999999999999999999999997543
No 65
>PHA02988 hypothetical protein; Provisional
Probab=100.00 E-value=1.1e-38 Score=341.15 Aligned_cols=261 Identities=20% Similarity=0.333 Sum_probs=209.3
Q ss_pred CcccccHHHHHHHHcCCCCCCcccccCCeeEEEEEeCCCcEEEEEEeccCChhh---HHHHHHHHHHHHhccCCccccee
Q 003158 497 GVRSFTYGEMALATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQG---EKEFLTEIQFLSRLHHRNLVSLV 573 (843)
Q Consensus 497 ~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~nIv~l~ 573 (843)
+.+.+..+++ +......||+|++|.||+|.+ +|+.||||++....... .+.+.+|+++|++++||||++++
T Consensus 11 ~~~~i~~~~i-----~~~~~~~i~~g~~~~v~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~ 84 (283)
T PHA02988 11 DIKCIESDDI-----DKYTSVLIKENDQNSIYKGIF-NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIY 84 (283)
T ss_pred cceecCHHHc-----CCCCCeEEeeCCceEEEEEEE-CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEe
Confidence 3444555555 222236799999999999998 68899999987543322 36778999999999999999999
Q ss_pred eeeec----CCcEEEEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcC-CCCCEEeccCCCCcEEEcCC
Q 003158 574 GYCDE----EGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTE-ADPPVFHRDIKASNILLDHK 648 (843)
Q Consensus 574 ~~~~~----~~~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~-~~~~iiH~Dlkp~NILl~~~ 648 (843)
|++.+ ....++||||+++|+|.+++... ..+++.....++.|++.||.|||+. + ++||||||+||+++++
T Consensus 85 g~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~--~~~~~~~~~~i~~~i~~~l~~lH~~~~---~~Hrdlkp~nill~~~ 159 (283)
T PHA02988 85 GFIIDIVDDLPRLSLILEYCTRGYLREVLDKE--KDLSFKTKLDMAIDCCKGLYNLYKYTN---KPYKNLTSVSFLVTEN 159 (283)
T ss_pred eeEEecccCCCceEEEEEeCCCCcHHHHHhhC--CCCChhHHHHHHHHHHHHHHHHHhcCC---CCCCcCChhhEEECCC
Confidence 99866 34789999999999999999764 3588899999999999999999985 6 8899999999999999
Q ss_pred CcEEEeeccccccCCCCCCCCcccceeeeeecccCCccCchhccc--CCCCchhhhHHHHHHHHHHHhCCCCCCCCcchH
Q 003158 649 FTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT--HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIV 726 (843)
Q Consensus 649 ~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~ 726 (843)
+.+||+|||+++...... ....|+..|+|||++.+ ..++.++|||||||++|||++|+.||..... .
T Consensus 160 ~~~kl~dfg~~~~~~~~~----------~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~-~ 228 (283)
T PHA02988 160 YKLKIICHGLEKILSSPP----------FKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTT-K 228 (283)
T ss_pred CcEEEcccchHhhhcccc----------ccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCH-H
Confidence 999999999998653221 22357889999999976 6889999999999999999999999976542 1
Q ss_pred HHHHHHhhcccchhhccCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhh
Q 003158 727 REVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWN 787 (843)
Q Consensus 727 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~ 787 (843)
+...... ........|..+++.+.+++.+||+.+|++||++.++++.|+.+..
T Consensus 229 ~~~~~i~--------~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~l~~~~~ 281 (283)
T PHA02988 229 EIYDLII--------NKNNSLKLPLDCPLEIKCIVEACTSHDSIKRPNIKEILYNLSLYKF 281 (283)
T ss_pred HHHHHHH--------hcCCCCCCCCcCcHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHHh
Confidence 1111110 0111223455678899999999999999999999999999998753
No 66
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00 E-value=1.8e-39 Score=354.91 Aligned_cols=192 Identities=26% Similarity=0.389 Sum_probs=166.3
Q ss_pred CcccccCCeeEEEEEeC-CCcEEEEEEeccCC---hhhHHHHHHHHHHHHhc-cCCcccceeeeeecCCcEEEEEecCCC
Q 003158 517 TQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQMLVYEFMSN 591 (843)
Q Consensus 517 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~lV~e~~~~ 591 (843)
+.||+|+||+||+|... +++.||+|+++... ....+.+.+|+.++.++ +||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~ 80 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG 80 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence 46999999999999965 68899999987532 22345677899888776 799999999999999999999999999
Q ss_pred CCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCCCCcc
Q 003158 592 GTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIV 671 (843)
Q Consensus 592 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~ 671 (843)
|+|.+++... ..+++..++.++.|++.||+|||+++ |+||||||+||+++.++.+||+|||+++......
T Consensus 81 ~~L~~~~~~~--~~l~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~----- 150 (329)
T cd05618 81 GDLMFHMQRQ--RKLPEEHARFYSAEISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPG----- 150 (329)
T ss_pred CCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHHHEEECCCCCEEEeeCCccccccCCC-----
Confidence 9999988654 35889999999999999999999999 9999999999999999999999999987532211
Q ss_pred cceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCC
Q 003158 672 PAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPIS 720 (843)
Q Consensus 672 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~ 720 (843)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||.
T Consensus 151 --~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~ 197 (329)
T cd05618 151 --DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 197 (329)
T ss_pred --CccccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCc
Confidence 11234568999999999999999999999999999999999999995
No 67
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=2.6e-39 Score=355.74 Aligned_cols=283 Identities=25% Similarity=0.376 Sum_probs=208.8
Q ss_pred CCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccC--ChhhHHHHHHHHHHHHhccCCcccceeeeeecC-----CcEE
Q 003158 512 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEG--SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE-----GEQM 583 (843)
Q Consensus 512 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~-----~~~~ 583 (843)
+|++.+.||+|+||.||+|... +++.||||++... ......++.+|+++++.++||||+++++++... ...+
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 80 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIY 80 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEE
Confidence 5788899999999999999964 6899999998743 223345788999999999999999999988543 2479
Q ss_pred EEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCC
Q 003158 584 LVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAP 663 (843)
Q Consensus 584 lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~ 663 (843)
+||||+. ++|.+++.... .+++..+..++.||++||.|||+++ |+||||||+|||++.++.+||+|||+++...
T Consensus 81 lv~e~~~-~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~~ 154 (338)
T cd07859 81 VVFELME-SDLHQVIKAND--DLTPEHHQFFLYQLLRALKYIHTAN---VFHRDLKPKNILANADCKLKICDFGLARVAF 154 (338)
T ss_pred EEEecCC-CCHHHHHHhcc--cCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEECCCCcEEEccCccccccc
Confidence 9999995 79999886543 4889999999999999999999999 9999999999999999999999999997543
Q ss_pred CCCCCCcccceeeeeecccCCccCchhccc--CCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhh
Q 003158 664 VPDIEGIVPAHVSTVVKGTPGYLDPEYFLT--HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSV 741 (843)
Q Consensus 664 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~ 741 (843)
..... ........||+.|+|||++.+ ..++.++|||||||++|||++|+.||..... .......
T Consensus 155 ~~~~~----~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~-~~~~~~~--------- 220 (338)
T cd07859 155 NDTPT----AIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNV-VHQLDLI--------- 220 (338)
T ss_pred cccCc----cccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCCh-HHHHHHH---------
Confidence 21110 111234568999999999876 6789999999999999999999999975442 2211111
Q ss_pred ccCCCCCCCHHHHHHHH-----HHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCCCCcc
Q 003158 742 IDGNMGSYPSECVEKFI-----KLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSS 816 (843)
Q Consensus 742 ~~~~~~~~~~~~~~~l~-----~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~sa~e 816 (843)
....+..+.+....+. +....+.. ..|.. ....++..++...+++.+||..||++|||++|
T Consensus 221 -~~~~~~~~~~~~~~i~~~~~~~~~~~~~~----~~~~~---------~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e 286 (338)
T cd07859 221 -TDLLGTPSPETISRVRNEKARRYLSSMRK----KQPVP---------FSQKFPNADPLALRLLERLLAFDPKDRPTAEE 286 (338)
T ss_pred -HHHhCCCCHHHHHHhhhhhHHHHHHhhcc----cCCCc---------hHHhcCCCChHHHHHHHHHcCcCcccCCCHHH
Confidence 0111122222222211 11111111 11110 01123344556678999999999999999999
Q ss_pred CCCCCcccCCCC
Q 003158 817 MLKHPYVSSDVS 828 (843)
Q Consensus 817 ~L~Hp~f~~~~~ 828 (843)
+|+||||.+...
T Consensus 287 ~l~hp~f~~~~~ 298 (338)
T cd07859 287 ALADPYFKGLAK 298 (338)
T ss_pred HhcCchhhhcCc
Confidence 999999977544
No 68
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-39 Score=352.70 Aligned_cols=261 Identities=25% Similarity=0.406 Sum_probs=217.0
Q ss_pred HHcCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCChhh---HHHHHHHHHHHHhcc-CCcccceeeeeecCCcEE
Q 003158 509 ATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQG---EKEFLTEIQFLSRLH-HRNLVSLVGYCDEEGEQM 583 (843)
Q Consensus 509 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~-h~nIv~l~~~~~~~~~~~ 583 (843)
....|+..+.||+|.||.||+++.+ +|+.+|+|++.+..... ...+.+|+++|+++. ||||+.+++.|.+....+
T Consensus 33 ~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~ 112 (382)
T KOG0032|consen 33 IKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVY 112 (382)
T ss_pred ccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEE
Confidence 3457888899999999999999976 49999999998655433 358899999999998 999999999999999999
Q ss_pred EEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCC----CcEEEeecccc
Q 003158 584 LVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHK----FTAKVADFGLS 659 (843)
Q Consensus 584 lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~----~~~kl~DfGla 659 (843)
+|||++.||.|.+.+... .+++.++..++.|++.|+.|||+.+ |+||||||+|+|+... +.+|++|||+|
T Consensus 113 lvmEL~~GGeLfd~i~~~---~~sE~da~~~~~~il~av~~lH~~g---vvHrDlKpEN~L~~~~~~~~~~ik~~DFGla 186 (382)
T KOG0032|consen 113 LVMELCEGGELFDRIVKK---HYSERDAAGIIRQILEAVKYLHSLG---VVHRDLKPENLLLASKDEGSGRIKLIDFGLA 186 (382)
T ss_pred EEEEecCCchHHHHHHHc---cCCHHHHHHHHHHHHHHHHHHHhCC---ceeccCCHHHeeeccccCCCCcEEEeeCCCc
Confidence 999999999999999776 2899999999999999999999999 9999999999999643 47999999999
Q ss_pred ccCCCCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccch
Q 003158 660 RLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMF 739 (843)
Q Consensus 660 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~ 739 (843)
..... .......+||+.|+|||++....|+..+||||+||++|.|++|..||..........
T Consensus 187 ~~~~~--------~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~---------- 248 (382)
T KOG0032|consen 187 KFIKP--------GERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFL---------- 248 (382)
T ss_pred eEccC--------CceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHH----------
Confidence 87653 234567889999999999999999999999999999999999999998655322111
Q ss_pred hhccCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCCCCccCCC
Q 003158 740 SVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLK 819 (843)
Q Consensus 740 ~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~sa~e~L~ 819 (843)
.+..+.. . -.+ ..++..+..+.||++.||..||.+|+||.++|+
T Consensus 249 ~i~~~~~-~---------------------f~~--------------~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~ 292 (382)
T KOG0032|consen 249 AILRGDF-D---------------------FTS--------------EPWDDISESAKDFIRKLLEFDPRKRLTAAQALQ 292 (382)
T ss_pred HHHcCCC-C---------------------CCC--------------CCccccCHHHHHHHHHhcccCcccCCCHHHHhc
Confidence 1111110 0 011 122333455678999999999999999999999
Q ss_pred CCcccCCCCC
Q 003158 820 HPYVSSDVSG 829 (843)
Q Consensus 820 Hp~f~~~~~~ 829 (843)
|||+++....
T Consensus 293 HpWi~~~~~~ 302 (382)
T KOG0032|consen 293 HPWIKSIGEA 302 (382)
T ss_pred CccccCCccc
Confidence 9999986443
No 69
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=2e-39 Score=355.60 Aligned_cols=199 Identities=27% Similarity=0.346 Sum_probs=169.8
Q ss_pred CCCCCCcccccCCeeEEEEEe----CCCcEEEEEEeccCC----hhhHHHHHHHHHHHHhc-cCCcccceeeeeecCCcE
Q 003158 512 NFNSSTQIGQGGYGKVYKGIL----PDGTVVAVKRAQEGS----LQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQ 582 (843)
Q Consensus 512 ~~~~~~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~ 582 (843)
+|++.+.||+|+||+||+++. .+++.||+|++.... ....+.+.+|+++++.+ +|+||+++++++..++..
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKL 80 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEE
Confidence 478889999999999999885 358899999987432 12235678899999999 599999999999999999
Q ss_pred EEEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccC
Q 003158 583 MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLA 662 (843)
Q Consensus 583 ~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~ 662 (843)
++||||+++|+|.+++..+ ..+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++..
T Consensus 81 ~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~---ivHrDlkp~Nili~~~~~~kl~DfG~~~~~ 155 (332)
T cd05614 81 HLILDYVSGGEMFTHLYQR--DNFSEDEVRFYSGEIILALEHLHKLG---IVYRDIKLENILLDSEGHVVLTDFGLSKEF 155 (332)
T ss_pred EEEEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCC---cEecCCCHHHeEECCCCCEEEeeCcCCccc
Confidence 9999999999999999654 34888999999999999999999999 999999999999999999999999999764
Q ss_pred CCCCCCCcccceeeeeecccCCccCchhcccC-CCCchhhhHHHHHHHHHHHhCCCCCCC
Q 003158 663 PVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTH-KLTDKSDVYSLGVVFLELLTGMQPISH 721 (843)
Q Consensus 663 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwS~G~~l~elltg~~pf~~ 721 (843)
.... ........||+.|+|||++.+. .++.++|||||||++|||++|+.||..
T Consensus 156 ~~~~------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~ 209 (332)
T cd05614 156 LSEE------KERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTL 209 (332)
T ss_pred cccC------CCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCC
Confidence 3221 1112345689999999999875 478899999999999999999999964
No 70
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00 E-value=1.9e-39 Score=354.09 Aligned_cols=195 Identities=27% Similarity=0.414 Sum_probs=167.7
Q ss_pred CcccccCCeeEEEEEe----CCCcEEEEEEeccCCh----hhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEEec
Q 003158 517 TQIGQGGYGKVYKGIL----PDGTVVAVKRAQEGSL----QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 588 (843)
Q Consensus 517 ~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~~----~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e~ 588 (843)
+.||+|+||.||++.. .+++.||+|+++.... .....+.+|+++++.++||||+++++++..++..++||||
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~ 81 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEY 81 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeC
Confidence 5799999999999985 3578999999875321 2234678899999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCCC
Q 003158 589 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 668 (843)
Q Consensus 589 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 668 (843)
+++|+|.+++.... .+.+..+..++.|++.||+|||+++ |+||||||+|||++.++.+||+|||+++......
T Consensus 82 ~~~~~L~~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~-- 154 (323)
T cd05584 82 LSGGELFMHLEREG--IFMEDTACFYLSEISLALEHLHQQG---IIYRDLKPENILLDAQGHVKLTDFGLCKESIHEG-- 154 (323)
T ss_pred CCCchHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEECCCCCEEEeeCcCCeecccCC--
Confidence 99999999996543 4778888899999999999999999 9999999999999999999999999987532211
Q ss_pred CcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCc
Q 003158 669 GIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 723 (843)
Q Consensus 669 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~ 723 (843)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 155 -----~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~ 204 (323)
T cd05584 155 -----TVTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAEN 204 (323)
T ss_pred -----CcccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCC
Confidence 11233568999999999999889999999999999999999999997543
No 71
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=1.2e-39 Score=357.30 Aligned_cols=198 Identities=30% Similarity=0.441 Sum_probs=175.0
Q ss_pred cCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCCh---hhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEE
Q 003158 511 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 586 (843)
Q Consensus 511 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~ 586 (843)
++|++.+.||+|+||.||+|... +++.||+|++..... ...+.+.+|+++++.++||||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~ 80 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAM 80 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEE
Confidence 36888999999999999999975 589999999875322 23456889999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCC
Q 003158 587 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 666 (843)
Q Consensus 587 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~ 666 (843)
||+++|+|.+++.... .+++..++.++.|++.||.|||+++ |+||||||+||++++++.+||+|||++.....
T Consensus 81 e~~~g~~L~~~l~~~~--~l~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~-- 153 (333)
T cd05600 81 EYVPGGDFRTLLNNLG--VLSEDHARFYMAEMFEAVDALHELG---YIHRDLKPENFLIDASGHIKLTDFGLSKGIVT-- 153 (333)
T ss_pred eCCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEECCCCCEEEEeCcCCccccc--
Confidence 9999999999996543 5788899999999999999999999 99999999999999999999999999976432
Q ss_pred CCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCc
Q 003158 667 IEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 723 (843)
Q Consensus 667 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~ 723 (843)
......||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 154 --------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~ 202 (333)
T cd05600 154 --------YANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGST 202 (333)
T ss_pred --------ccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCC
Confidence 1234568999999999999999999999999999999999999997543
No 72
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=1.5e-39 Score=355.36 Aligned_cols=195 Identities=26% Similarity=0.337 Sum_probs=167.9
Q ss_pred CcccccCCeeEEEEEe-CCCcEEEEEEeccCC---hhhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEEecCCCC
Q 003158 517 TQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNG 592 (843)
Q Consensus 517 ~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e~~~~g 592 (843)
+.||+|+||.||++.. .+++.||+|++.... ......+.+|+++++.++||||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence 3689999999999996 478999999987532 222356778999999999999999999999999999999999999
Q ss_pred CHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhc-CCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCCCCcc
Q 003158 593 TLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHT-EADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIV 671 (843)
Q Consensus 593 sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~-~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~ 671 (843)
+|.+++.... .+++..++.++.||+.||+|||+ .+ |+||||||+|||+++++.+||+|||+++......
T Consensus 81 ~L~~~l~~~~--~l~~~~~~~~~~qi~~aL~~lH~~~~---ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~----- 150 (325)
T cd05594 81 ELFFHLSRER--VFSEDRARFYGAEIVSALDYLHSEKN---VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDG----- 150 (325)
T ss_pred cHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhcCC---EEecCCCCCeEEECCCCCEEEecCCCCeecCCCC-----
Confidence 9999886543 58899999999999999999997 67 9999999999999999999999999987532211
Q ss_pred cceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCc
Q 003158 672 PAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 723 (843)
Q Consensus 672 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~ 723 (843)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 151 --~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~ 200 (325)
T cd05594 151 --ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD 200 (325)
T ss_pred --cccccccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCC
Confidence 11233569999999999999999999999999999999999999997543
No 73
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=100.00 E-value=4.2e-39 Score=350.71 Aligned_cols=281 Identities=25% Similarity=0.342 Sum_probs=196.9
Q ss_pred CCcccccCCeeEEEEEeC---CCcEEEEEEeccCChhhHHHHHHHHHHHHhccCCcccceeeeeec--CCcEEEEEecCC
Q 003158 516 STQIGQGGYGKVYKGILP---DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDE--EGEQMLVYEFMS 590 (843)
Q Consensus 516 ~~~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~--~~~~~lV~e~~~ 590 (843)
.++||+|+||+||+|... +++.||+|.+.... ....+.+|++++++++||||+++++++.. +...++||||+.
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~ 83 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAE 83 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCC--CcHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEeccC
Confidence 468999999999999864 46889999987532 23457889999999999999999999854 456899999995
Q ss_pred CCCHHHHHhhc-------CCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEE----cCCCcEEEeecccc
Q 003158 591 NGTLRDQLSAK-------SKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILL----DHKFTAKVADFGLS 659 (843)
Q Consensus 591 ~gsL~~~l~~~-------~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl----~~~~~~kl~DfGla 659 (843)
++|.+++... ....+++..++.++.||+.||+|||+++ |+||||||+|||+ +.++.+||+|||++
T Consensus 84 -~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~---ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a 159 (317)
T cd07868 84 -HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANW---VLHRDLKPANILVMGEGPERGRVKIADMGFA 159 (317)
T ss_pred -CCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCC---EEcCCCCHHHEEEecCCCCcCcEEEeecCce
Confidence 6898887532 1235888999999999999999999999 9999999999999 45678999999999
Q ss_pred ccCCCCCCCCcccceeeeeecccCCccCchhccc-CCCCchhhhHHHHHHHHHHHhCCCCCCCCcchH--------HHHH
Q 003158 660 RLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIV--------REVN 730 (843)
Q Consensus 660 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~--------~~~~ 730 (843)
+....... +........||+.|+|||++.+ ..++.++||||+||++|||++|+.||....... ++..
T Consensus 160 ~~~~~~~~----~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~ 235 (317)
T cd07868 160 RLFNSPLK----PLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLD 235 (317)
T ss_pred eccCCCCc----cccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCCcccccccccccHHHHH
Confidence 86543211 1112234568999999999987 458899999999999999999999996433210 1111
Q ss_pred HHhhcccchhhccCCCCCCCHHHHHHHHHH------HHHhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCC
Q 003158 731 IAYQSSMMFSVIDGNMGSYPSECVEKFIKL------ALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEH 804 (843)
Q Consensus 731 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l------~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L 804 (843)
..+ . ..+..+...++.+... +.. +..+...... +...++. .....+..+.||+.+||
T Consensus 236 ~~~------~----~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~---~~~~~~~---~~~~~~~~~~dli~~mL 298 (317)
T cd07868 236 RIF------N----VMGFPADKDWEDIKKMPEHSTLMKD-FRRNTYTNCS---LIKYMEK---HKVKPDSKAFHLLQKLL 298 (317)
T ss_pred HHH------H----hcCCCChHHhHHHhhccchhhhhhh-hhccccCccc---ccchHHh---cCCCCChHHHHHHHHHh
Confidence 100 0 0111111112211110 000 0000000000 1111111 11223445678999999
Q ss_pred CCCCCCCCCCccCCCCCcc
Q 003158 805 TSKEETPPSSSSMLKHPYV 823 (843)
Q Consensus 805 ~~dp~~R~sa~e~L~Hp~f 823 (843)
++||++|+||+|+|+||||
T Consensus 299 ~~dP~~R~t~~e~l~hp~f 317 (317)
T cd07868 299 TMDPIKRITSEQAMQDPYF 317 (317)
T ss_pred ccCcccCCCHHHHhcCCCC
Confidence 9999999999999999998
No 74
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=2.8e-39 Score=345.53 Aligned_cols=251 Identities=25% Similarity=0.419 Sum_probs=219.2
Q ss_pred cCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCCh--hhHHHHHHHHHHHHhccCCcccceeeeeecCCc-EEEEE
Q 003158 511 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGE-QMLVY 586 (843)
Q Consensus 511 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~-~~lV~ 586 (843)
++|...+.+|+|+||.++..+.+ +++.+|+|.+..... .......+|+.++++++|||||.+.+.|.+++. .+|||
T Consensus 4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Ivm 83 (426)
T KOG0589|consen 4 DNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIVM 83 (426)
T ss_pred chhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEEE
Confidence 57888999999999999999854 688999998875432 234478899999999999999999999999888 99999
Q ss_pred ecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCC
Q 003158 587 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 666 (843)
Q Consensus 587 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~ 666 (843)
+|++||++.+.+.++...-+++..+..++.|++.|+.|||++. |+|||||+.||+++.++.|||+|||+|+.+...+
T Consensus 84 ~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~~---iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~~ 160 (426)
T KOG0589|consen 84 EYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHENR---VLHRDLKCANIFLTKDKKVKLGDFGLAKILNPED 160 (426)
T ss_pred eecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhhh---hhcccchhhhhhccccCceeecchhhhhhcCCch
Confidence 9999999999998887778999999999999999999999888 9999999999999999999999999999876543
Q ss_pred CCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhccCCC
Q 003158 667 IEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNM 746 (843)
Q Consensus 667 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 746 (843)
.......||+.||.||.+.+.+|+.|+||||+||++|||++-+++|...+ ....+ ..+.....
T Consensus 161 -------~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~-m~~Li---------~ki~~~~~ 223 (426)
T KOG0589|consen 161 -------SLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASN-MSELI---------LKINRGLY 223 (426)
T ss_pred -------hhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccc-hHHHH---------HHHhhccC
Confidence 23456789999999999999999999999999999999999999997544 22222 23334445
Q ss_pred CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 003158 747 GSYPSECVEKFIKLALKCCQDETDARPSMSEVMRE 781 (843)
Q Consensus 747 ~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~ 781 (843)
.+.|..+..++..++..|++++|..||++.+++.+
T Consensus 224 ~Plp~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~ 258 (426)
T KOG0589|consen 224 SPLPSMYSSELRSLVKSMLRKNPEHRPSALELLRR 258 (426)
T ss_pred CCCCccccHHHHHHHHHHhhcCCccCCCHHHHhhC
Confidence 56788899999999999999999999999999876
No 75
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00 E-value=1.8e-39 Score=360.36 Aligned_cols=262 Identities=21% Similarity=0.293 Sum_probs=202.5
Q ss_pred HHcCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCC---hhhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEE
Q 003158 509 ATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQML 584 (843)
Q Consensus 509 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~l 584 (843)
..++|++.+.||+|+||+||+|... +++.||+|++.... ....+.+.+|+.+++.++||||+++++++.++...++
T Consensus 41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~l 120 (370)
T cd05596 41 KAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLYM 120 (370)
T ss_pred CHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEE
Confidence 4568999999999999999999965 68999999986422 1223457789999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCC
Q 003158 585 VYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPV 664 (843)
Q Consensus 585 V~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~ 664 (843)
||||+++|+|.+++... .+++..+..++.|++.||+|||+++ |+||||||+|||+++++.+||+|||++.....
T Consensus 121 v~Ey~~gg~L~~~l~~~---~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~~ 194 (370)
T cd05596 121 VMEYMPGGDLVNLMSNY---DIPEKWARFYTAEVVLALDAIHSMG---FIHRDVKPDNMLLDKSGHLKLADFGTCMKMDA 194 (370)
T ss_pred EEcCCCCCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHEEEcCCCCEEEEeccceeeccC
Confidence 99999999999998653 3677888889999999999999999 99999999999999999999999999976532
Q ss_pred CCCCCcccceeeeeecccCCccCchhcccC----CCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchh
Q 003158 665 PDIEGIVPAHVSTVVKGTPGYLDPEYFLTH----KLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFS 740 (843)
Q Consensus 665 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~ 740 (843)
.. ........||+.|+|||++.+. .++.++|||||||++|||++|+.||....... ....
T Consensus 195 ~~------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~-~~~~--------- 258 (370)
T cd05596 195 NG------MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVG-TYSK--------- 258 (370)
T ss_pred CC------cccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHH-HHHH---------
Confidence 21 1112345699999999998753 37889999999999999999999997543211 1100
Q ss_pred hccCC-CCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCC--CCCCccC
Q 003158 741 VIDGN-MGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEET--PPSSSSM 817 (843)
Q Consensus 741 ~~~~~-~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~--R~sa~e~ 817 (843)
+.... ...+|. ....+..+.+|+.+||+.+|++ |+|++|+
T Consensus 259 i~~~~~~~~~~~-------------------------------------~~~~s~~~~~li~~~L~~~p~r~~R~s~~el 301 (370)
T cd05596 259 IMDHKNSLTFPD-------------------------------------DIEISKQAKDLICAFLTDREVRLGRNGVDEI 301 (370)
T ss_pred HHcCCCcCCCCC-------------------------------------cCCCCHHHHHHHHHHccChhhccCCCCHHHH
Confidence 00000 000000 0011233446777788877877 8899999
Q ss_pred CCCCcccCCCCC
Q 003158 818 LKHPYVSSDVSG 829 (843)
Q Consensus 818 L~Hp~f~~~~~~ 829 (843)
++||||++..+.
T Consensus 302 l~h~~~~~~~~~ 313 (370)
T cd05596 302 KSHPFFKNDQWT 313 (370)
T ss_pred hcCcccCCCChh
Confidence 999998876554
No 76
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=100.00 E-value=6.9e-39 Score=347.65 Aligned_cols=288 Identities=22% Similarity=0.342 Sum_probs=212.2
Q ss_pred cCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCCh-hhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEEec
Q 003158 511 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 588 (843)
Q Consensus 511 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e~ 588 (843)
++|.+.+.||+|+||+||+|... +++.||+|.+..... .....+.+|++++++++||||+++++++..++..++||||
T Consensus 6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 85 (309)
T cd07872 6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFEY 85 (309)
T ss_pred CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEeC
Confidence 56888999999999999999965 688999999875332 2234678899999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCCC
Q 003158 589 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 668 (843)
Q Consensus 589 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 668 (843)
++ ++|.+++.... ..+++..++.++.|+++||+|||+++ |+||||||+||++++++.+||+|||+++......
T Consensus 86 ~~-~~l~~~~~~~~-~~~~~~~~~~~~~qi~~aL~~lH~~~---ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~-- 158 (309)
T cd07872 86 LD-KDLKQYMDDCG-NIMSMHNVKIFLYQILRGLAYCHRRK---VLHRDLKPQNLLINERGELKLADFGLARAKSVPT-- 158 (309)
T ss_pred CC-CCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEECccccceecCCCc--
Confidence 96 58988886543 35788889999999999999999999 9999999999999999999999999997543221
Q ss_pred CcccceeeeeecccCCccCchhccc-CCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhccCCCC
Q 003158 669 GIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMG 747 (843)
Q Consensus 669 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 747 (843)
.......+++.|+|||.+.+ ..++.++|||||||++|||+||+.||...... +...... .. .+
T Consensus 159 -----~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~-~~~~~~~------~~----~~ 222 (309)
T cd07872 159 -----KTYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVE-DELHLIF------RL----LG 222 (309)
T ss_pred -----cccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHH------HH----hC
Confidence 11123457889999999875 56889999999999999999999999754421 2111111 00 11
Q ss_pred CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCCCCccCCCCCcccCCC
Q 003158 748 SYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSSDV 827 (843)
Q Consensus 748 ~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~sa~e~L~Hp~f~~~~ 827 (843)
..+.+.++.+.......-...|..+|.. ..+..+..+....|++.+||.+||++|+|++|+|+||||+.-.
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~~~~ 293 (309)
T cd07872 223 TPTEETWPGISSNDEFKNYNFPKYKPQP---------LINHAPRLDTEGIELLTKFLQYESKKRISAEEAMKHAYFRSLG 293 (309)
T ss_pred CCCHHHHhhhcchhhhhhhhcCccCCCc---------hhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhcChhhhhcc
Confidence 1112222211111000001112222111 1112233455667999999999999999999999999998755
Q ss_pred CCC
Q 003158 828 SGS 830 (843)
Q Consensus 828 ~~~ 830 (843)
...
T Consensus 294 ~~~ 296 (309)
T cd07872 294 TRI 296 (309)
T ss_pred ccc
Confidence 443
No 77
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=100.00 E-value=7.7e-39 Score=354.90 Aligned_cols=204 Identities=23% Similarity=0.318 Sum_probs=174.5
Q ss_pred HHHcCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCC---hhhHHHHHHHHHHHHhccCCcccceeeeeecCCcEE
Q 003158 508 LATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQM 583 (843)
Q Consensus 508 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~ 583 (843)
...++|++.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|+.+++.++||||+++++++.+++..+
T Consensus 40 ~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~ 119 (370)
T cd05621 40 MKAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLY 119 (370)
T ss_pred CCHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEE
Confidence 34578999999999999999999965 68899999986422 222456788999999999999999999999999999
Q ss_pred EEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCC
Q 003158 584 LVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAP 663 (843)
Q Consensus 584 lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~ 663 (843)
+||||+++|+|.+++... .+++..+..++.||+.||+|||+++ |+||||||+|||+++++.+||+|||+|....
T Consensus 120 lv~Ey~~gg~L~~~l~~~---~~~~~~~~~~~~qil~aL~~LH~~~---IvHrDLKp~NILl~~~~~~kL~DFG~a~~~~ 193 (370)
T cd05621 120 MVMEYMPGGDLVNLMSNY---DVPEKWAKFYTAEVVLALDAIHSMG---LIHRDVKPDNMLLDKHGHLKLADFGTCMKMD 193 (370)
T ss_pred EEEcCCCCCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHEEECCCCCEEEEecccceecc
Confidence 999999999999999643 4788889999999999999999999 9999999999999999999999999998653
Q ss_pred CCCCCCcccceeeeeecccCCccCchhcccCC----CCchhhhHHHHHHHHHHHhCCCCCCCCc
Q 003158 664 VPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHK----LTDKSDVYSLGVVFLELLTGMQPISHGK 723 (843)
Q Consensus 664 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~sDvwS~G~~l~elltg~~pf~~~~ 723 (843)
... ........||+.|+|||++.+.. ++.++||||+||++|||++|+.||....
T Consensus 194 ~~~------~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~ 251 (370)
T cd05621 194 ETG------MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADS 251 (370)
T ss_pred cCC------ceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCC
Confidence 221 11123456999999999997643 7889999999999999999999997543
No 78
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=100.00 E-value=2.9e-39 Score=352.84 Aligned_cols=239 Identities=24% Similarity=0.391 Sum_probs=189.4
Q ss_pred CCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCCh---hhHHHHHHHHHHH---HhccCCcccceeeeeecCCcEEEE
Q 003158 513 FNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFL---SRLHHRNLVSLVGYCDEEGEQMLV 585 (843)
Q Consensus 513 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l---~~l~h~nIv~l~~~~~~~~~~~lV 585 (843)
|++.+.||+|+||.||+|... +++.||||+++.... ...+.+.+|++++ +.++||||+++++++.+.+..++|
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv 80 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFV 80 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEE
Confidence 567889999999999999964 689999999975321 2234566676654 566899999999999999999999
Q ss_pred EecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCC
Q 003158 586 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVP 665 (843)
Q Consensus 586 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~ 665 (843)
|||+++|+|..+++. ..+++..+..++.||+.||+|||+.+ |+||||||+||++++++.+||+|||+++.....
T Consensus 81 ~E~~~~~~L~~~~~~---~~l~~~~~~~~~~qi~~al~~lH~~~---ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~~ 154 (324)
T cd05589 81 MEYAAGGDLMMHIHT---DVFSEPRAVFYAACVVLGLQYLHENK---IVYRDLKLDNLLLDTEGFVKIADFGLCKEGMGF 154 (324)
T ss_pred EcCCCCCcHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHHhCC---eEecCCCHHHeEECCCCcEEeCcccCCccCCCC
Confidence 999999999988854 35899999999999999999999999 999999999999999999999999998753221
Q ss_pred CCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhccCC
Q 003158 666 DIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGN 745 (843)
Q Consensus 666 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 745 (843)
........|++.|+|||.+.+..++.++|||||||++|||++|+.||...... +.... +.. .
T Consensus 155 -------~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~-~~~~~---------i~~-~ 216 (324)
T cd05589 155 -------GDRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEE-EVFDS---------IVN-D 216 (324)
T ss_pred -------CCcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHH-HHHHH---------HHh-C
Confidence 11123456899999999999999999999999999999999999999754321 11111 111 1
Q ss_pred CCCCCHHHHHHHHHHHHHhcccCCCCCCCH
Q 003158 746 MGSYPSECVEKFIKLALKCCQDETDARPSM 775 (843)
Q Consensus 746 ~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~ 775 (843)
...+|..++..+.+++.+|++.+|.+||++
T Consensus 217 ~~~~p~~~~~~~~~li~~~L~~dP~~R~~~ 246 (324)
T cd05589 217 EVRYPRFLSREAISIMRRLLRRNPERRLGS 246 (324)
T ss_pred CCCCCCCCCHHHHHHHHHHhhcCHhHcCCC
Confidence 122344556667778888888888888743
No 79
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00 E-value=4.4e-39 Score=352.00 Aligned_cols=193 Identities=26% Similarity=0.388 Sum_probs=167.4
Q ss_pred CcccccCCeeEEEEEeC-CCcEEEEEEeccCCh---hhHHHHHHHHHHHHhc-cCCcccceeeeeecCCcEEEEEecCCC
Q 003158 517 TQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQMLVYEFMSN 591 (843)
Q Consensus 517 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~lV~e~~~~ 591 (843)
+.||+|+||.||+|... +++.||+|+++.... ...+.+.+|..+++.+ +||||+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG 80 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence 46899999999999965 689999999975322 2235678899999988 799999999999999999999999999
Q ss_pred CCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCCCCcc
Q 003158 592 GTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIV 671 (843)
Q Consensus 592 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~ 671 (843)
|+|.+++... ..+++..++.++.|++.||+|||+++ |+||||||+||++++++.+||+|||+++.....
T Consensus 81 g~L~~~~~~~--~~l~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~------ 149 (329)
T cd05588 81 GDLMFHMQRQ--RKLPEEHARFYSAEISLALNFLHERG---IIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRP------ 149 (329)
T ss_pred CCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHeEECCCCCEEECcCccccccccC------
Confidence 9999988654 35899999999999999999999999 999999999999999999999999998743211
Q ss_pred cceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCC
Q 003158 672 PAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISH 721 (843)
Q Consensus 672 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~ 721 (843)
........||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 150 -~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~ 198 (329)
T cd05588 150 -GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDI 198 (329)
T ss_pred -CCccccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCccc
Confidence 1122345689999999999999999999999999999999999999963
No 80
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00 E-value=2.2e-38 Score=336.00 Aligned_cols=256 Identities=25% Similarity=0.410 Sum_probs=208.8
Q ss_pred HcCCCCCCcccccCCeeEEEEEeC----CCcEEEEEEeccCCh-hhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEE
Q 003158 510 TNNFNSSTQIGQGGYGKVYKGILP----DGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQML 584 (843)
Q Consensus 510 ~~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~l 584 (843)
.++|++.+.||+|+||.||+|.+. .+..||+|.++.... .....+.+|+.+++.++||||+++++++...+..++
T Consensus 4 ~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l 83 (266)
T cd05064 4 NKSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMMI 83 (266)
T ss_pred hHHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcEE
Confidence 457888999999999999999853 367899999886432 334678999999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCC
Q 003158 585 VYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPV 664 (843)
Q Consensus 585 V~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~ 664 (843)
||||+++|+|.+++.... ..+++..++.++.|++.||+|||+.+ ++||||||+||+++.++.+|++|||.+.....
T Consensus 84 v~e~~~~~~L~~~l~~~~-~~l~~~~~~~~~~~i~~al~~lH~~~---iiH~dikp~nili~~~~~~~l~dfg~~~~~~~ 159 (266)
T cd05064 84 VTEYMSNGALDSFLRKHE-GQLVAGQLMGMLPGLASGMKYLSEMG---YVHKGLAAHKVLVNSDLVCKISGFRRLQEDKS 159 (266)
T ss_pred EEEeCCCCcHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHCC---EeeccccHhhEEEcCCCcEEECCCcccccccc
Confidence 999999999999997643 46889999999999999999999998 99999999999999999999999998765321
Q ss_pred CCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHh-CCCCCCCCcchHHHHHHHhhcccchhhcc
Q 003158 665 PDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVID 743 (843)
Q Consensus 665 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 743 (843)
.. ........++..|+|||.+.+..++.++|||||||++||+++ |..||...... +... .+.+
T Consensus 160 ~~------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~-~~~~---------~~~~ 223 (266)
T cd05064 160 EA------IYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQ-DVIK---------AVED 223 (266)
T ss_pred cc------hhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHH-HHHH---------HHHC
Confidence 11 011112335678999999999999999999999999999875 99999754321 1111 1122
Q ss_pred CCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHh
Q 003158 744 GNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 785 (843)
Q Consensus 744 ~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~ 785 (843)
+...+.+..++..+.+++.+||+.+|.+||++.++.+.|+++
T Consensus 224 ~~~~~~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~~l~~~ 265 (266)
T cd05064 224 GFRLPAPRNCPNLLHQLMLDCWQKERGERPRFSQIHSILSKM 265 (266)
T ss_pred CCCCCCCCCCCHHHHHHHHHHcCCCchhCCCHHHHHHHHHhh
Confidence 222344666788899999999999999999999999988764
No 81
>PHA03211 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=8.3e-39 Score=360.65 Aligned_cols=286 Identities=22% Similarity=0.252 Sum_probs=206.3
Q ss_pred HHcCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCChhhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEEe
Q 003158 509 ATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 587 (843)
Q Consensus 509 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e 587 (843)
...+|.+.+.||+|+||.||+|... .++.||||.... ..+.+|++++++++|+||+++++++...+..++|||
T Consensus 167 ~~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~------~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e 240 (461)
T PHA03211 167 AGLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGWY------ASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLP 240 (461)
T ss_pred ccCCeEEEEEEccCCCeEEEEEEECCCCCEEEEecccc------cCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEE
Confidence 3557999999999999999999975 588999996432 245689999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCC
Q 003158 588 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 667 (843)
Q Consensus 588 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~ 667 (843)
++ .++|.+++.... ..+++..++.++.|+++||.|||+++ |+||||||+|||++.++.+||+|||+++.......
T Consensus 241 ~~-~~~L~~~l~~~~-~~l~~~~~~~i~~qi~~aL~yLH~~g---IvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~ 315 (461)
T PHA03211 241 KY-RSDLYTYLGARL-RPLGLAQVTAVARQLLSAIDYIHGEG---IIHRDIKTENVLVNGPEDICLGDFGAACFARGSWS 315 (461)
T ss_pred cc-CCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCC---EEECcCCHHHEEECCCCCEEEcccCCceecccccc
Confidence 99 479999886532 36899999999999999999999999 99999999999999999999999999986542211
Q ss_pred CCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCcc------hHHHHHHHhhcccchhh
Q 003158 668 EGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKN------IVREVNIAYQSSMMFSV 741 (843)
Q Consensus 668 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~------~~~~~~~~~~~~~~~~~ 741 (843)
........||+.|+|||++.+..++.++|||||||++|||++|..|+..... ...++.........
T Consensus 316 -----~~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~--- 387 (461)
T PHA03211 316 -----TPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQV--- 387 (461)
T ss_pred -----cccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhcc---
Confidence 1112245699999999999999999999999999999999998877653221 01111111110000
Q ss_pred ccCCCCCC-CHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCCCCccCCCC
Q 003158 742 IDGNMGSY-PSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKH 820 (843)
Q Consensus 742 ~~~~~~~~-~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~sa~e~L~H 820 (843)
........ .......+.... ......+..|+... .+...+....+|+.+||++||++||||+|+|+|
T Consensus 388 ~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~-----------~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~h 455 (461)
T PHA03211 388 HVDEFPQHAGSRLVSQYRHRA-ARNRRPAYTRPAWT-----------RYYKLDLDVEYLVCRALTFDGARRPSAAELLRL 455 (461)
T ss_pred ccccCCCCcchHHHHHHHhhh-hcccCCccCCcchh-----------hhccccchHHHHHHHHcccChhhCcCHHHHhhC
Confidence 00001111 111111111100 00111111111111 111234456789999999999999999999999
Q ss_pred CcccC
Q 003158 821 PYVSS 825 (843)
Q Consensus 821 p~f~~ 825 (843)
|||.+
T Consensus 456 p~f~~ 460 (461)
T PHA03211 456 PLFQS 460 (461)
T ss_pred cccCC
Confidence 99975
No 82
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00 E-value=6.5e-39 Score=350.08 Aligned_cols=200 Identities=23% Similarity=0.367 Sum_probs=170.9
Q ss_pred CCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCC---hhhHHHHHHHHHHHHhccC-CcccceeeeeecCCcEEEEE
Q 003158 512 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLHH-RNLVSLVGYCDEEGEQMLVY 586 (843)
Q Consensus 512 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h-~nIv~l~~~~~~~~~~~lV~ 586 (843)
+|++.+.||+|+||.||+|... +++.||+|++.... ....+.+..|.+++..+.| ++|+++++++.+.+..++||
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM 80 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEE
Confidence 4788899999999999999965 57899999987532 2234567889999999976 56888999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCC
Q 003158 587 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 666 (843)
Q Consensus 587 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~ 666 (843)
||+++|+|.+++.... .+++..+..++.||+.||+|||+++ |+||||||+|||+++++.+||+|||+++.....
T Consensus 81 E~~~~g~L~~~~~~~~--~~~~~~~~~~~~qi~~al~~lH~~~---ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~- 154 (324)
T cd05587 81 EYVNGGDLMYHIQQVG--KFKEPHAVFYAAEIAIGLFFLHSKG---IIYRDLKLDNVMLDAEGHIKIADFGMCKENIFG- 154 (324)
T ss_pred cCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHeEEcCCCCEEEeecCcceecCCC-
Confidence 9999999999986543 4788899999999999999999998 999999999999999999999999998743211
Q ss_pred CCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCc
Q 003158 667 IEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 723 (843)
Q Consensus 667 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~ 723 (843)
........||+.|+|||++.+..++.++||||+||++|||++|+.||....
T Consensus 155 ------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~ 205 (324)
T cd05587 155 ------GKTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGED 205 (324)
T ss_pred ------CCceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCC
Confidence 112234568999999999999999999999999999999999999997543
No 83
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-39 Score=312.90 Aligned_cols=268 Identities=25% Similarity=0.367 Sum_probs=214.2
Q ss_pred HHcCCCCCCcccccCCeeEEEEE-eCCCcEEEEEEeccCChhhHHHHHHHHHHHHhccCCcccceeeeeecC-----CcE
Q 003158 509 ATNNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE-----GEQ 582 (843)
Q Consensus 509 ~~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~-----~~~ 582 (843)
..++|.+.+.+|+|||+.||.++ ..+++.+|+|++.....++.+..++|++..++++|||+++++++...+ ...
T Consensus 19 n~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~~ 98 (302)
T KOG2345|consen 19 NNKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHEA 98 (302)
T ss_pred cCceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCceeE
Confidence 45789999999999999999999 678999999999987778888999999999999999999999998543 358
Q ss_pred EEEEecCCCCCHHHHHhhc--CCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccc
Q 003158 583 MLVYEFMSNGTLRDQLSAK--SKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSR 660 (843)
Q Consensus 583 ~lV~e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~ 660 (843)
||+++|+..|+|.+.+... ++..+++.++++|+.+|++||++||+.. |+++||||||.|||+.+++.+++.|||.+.
T Consensus 99 yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~-~~yAH~DiKP~NILls~~~~~vl~D~GS~~ 177 (302)
T KOG2345|consen 99 YLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKE-PPYAHRDIKPANILLSDSGLPVLMDLGSAT 177 (302)
T ss_pred EEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccC-CcccccCCCcceeEecCCCceEEEeccCcc
Confidence 9999999999999998763 3446999999999999999999999986 689999999999999999999999999997
Q ss_pred cCCCCCCCCc--ccceeeeeecccCCccCchhccc---CCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhc
Q 003158 661 LAPVPDIEGI--VPAHVSTVVKGTPGYLDPEYFLT---HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQS 735 (843)
Q Consensus 661 ~~~~~~~~~~--~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~ 735 (843)
.....-.+.. ..-+.-.....|..|+|||.+.- ...++++|||||||++|+|+.|..||+..-.. ..
T Consensus 178 ~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~--------Gg 249 (302)
T KOG2345|consen 178 QAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQQ--------GG 249 (302)
T ss_pred ccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhhc--------CC
Confidence 6543211110 00111234568999999999964 56789999999999999999999999632110 00
Q ss_pred ccchhhccCCCC-CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHh
Q 003158 736 SMMFSVIDGNMG-SYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 785 (843)
Q Consensus 736 ~~~~~~~~~~~~-~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~ 785 (843)
.....+..+... +....+++.+.+++..|++.||.+||+..+++..+.++
T Consensus 250 SlaLAv~n~q~s~P~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d~L 300 (302)
T KOG2345|consen 250 SLALAVQNAQISIPNSSRYSEALHQLIKSMLQVDPNQRPTIPELLSKLDDL 300 (302)
T ss_pred eEEEeeeccccccCCCCCccHHHHHHHHHHhcCCcccCCCHHHHHHHHHhh
Confidence 111122222211 11223788999999999999999999999999887764
No 84
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00 E-value=3.9e-38 Score=340.97 Aligned_cols=261 Identities=27% Similarity=0.426 Sum_probs=203.6
Q ss_pred HcCCCCCCcccccCCeeEEEEEeCC-----------------CcEEEEEEeccCC-hhhHHHHHHHHHHHHhccCCcccc
Q 003158 510 TNNFNSSTQIGQGGYGKVYKGILPD-----------------GTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVS 571 (843)
Q Consensus 510 ~~~~~~~~~lg~G~~g~Vy~~~~~~-----------------~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~ 571 (843)
.++|.+.+.||+|+||.||+|.+++ +..||+|.+.... ....+++.+|++++++++||||++
T Consensus 4 ~~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~ 83 (304)
T cd05096 4 RGHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIR 83 (304)
T ss_pred hhhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeE
Confidence 3578889999999999999998532 3479999987643 233567999999999999999999
Q ss_pred eeeeeecCCcEEEEEecCCCCCHHHHHhhcC-----------------CCCcchhHHHHHHHHHHHHHHHHhcCCCCCEE
Q 003158 572 LVGYCDEEGEQMLVYEFMSNGTLRDQLSAKS-----------------KEPLGFAMRLSIALGSSRGILYLHTEADPPVF 634 (843)
Q Consensus 572 l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~-----------------~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ii 634 (843)
+++++.+.+..++||||+++|+|.+++.... ...+++..++.++.||+.||.|||+.+ |+
T Consensus 84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~---iv 160 (304)
T cd05096 84 LLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLN---FV 160 (304)
T ss_pred EEEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCC---cc
Confidence 9999999999999999999999999986532 124677889999999999999999999 99
Q ss_pred eccCCCCcEEEcCCCcEEEeeccccccCCCCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHh
Q 003158 635 HRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT 714 (843)
Q Consensus 635 H~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~ellt 714 (843)
||||||+|||+++++.+||+|||+++.....+. ........++..|+|||++.+..++.++|||||||++|||++
T Consensus 161 H~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~ 235 (304)
T cd05096 161 HRDLATRNCLVGENLTIKIADFGMSRNLYAGDY-----YRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILM 235 (304)
T ss_pred ccCcchhheEEcCCccEEECCCccceecccCce-----eEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHH
Confidence 999999999999999999999999976543221 111223345788999999998899999999999999999997
Q ss_pred --CCCCCCCCcchH--HHHHHHhhcccchhhccCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 003158 715 --GMQPISHGKNIV--REVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELE 783 (843)
Q Consensus 715 --g~~pf~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~ 783 (843)
+..||....... ......... .........+..++..+.+++.+||+.+|.+||++.++.+.|+
T Consensus 236 ~~~~~p~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~~l~ 303 (304)
T cd05096 236 LCKEQPYGELTDEQVIENAGEFFRD-----QGRQVYLFRPPPCPQGLYELMLQCWSRDCRERPSFSDIHAFLT 303 (304)
T ss_pred ccCCCCCCcCCHHHHHHHHHHHhhh-----ccccccccCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHh
Confidence 556776433211 111110000 0001111224456778999999999999999999999988775
No 85
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-39 Score=345.57 Aligned_cols=264 Identities=30% Similarity=0.494 Sum_probs=225.9
Q ss_pred HHHHHHHHcCCCCCCcccccCCeeEEEEEeCC-CcEEEEEEeccCChhhHHHHHHHHHHHHhccCCcccceeeeeecCCc
Q 003158 503 YGEMALATNNFNSSTQIGQGGYGKVYKGILPD-GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGE 581 (843)
Q Consensus 503 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~ 581 (843)
+++|+....+....++||-|.||.||.|.|+. .-.||||.++.+..+ ..+|..|+.+|+.++|||+|+++|+|..+-.
T Consensus 259 ~DkWEmeRtdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDtMe-veEFLkEAAvMKeikHpNLVqLLGVCT~EpP 337 (1157)
T KOG4278|consen 259 ADKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTHEPP 337 (1157)
T ss_pred cchhhccchheeeeeccCCCcccceeeeeeeccceeeehhhhhhcchh-HHHHHHHHHHHHhhcCccHHHHhhhhccCCC
Confidence 46777777888889999999999999999864 678999999875444 4689999999999999999999999999999
Q ss_pred EEEEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeecccccc
Q 003158 582 QMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRL 661 (843)
Q Consensus 582 ~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~ 661 (843)
+|||+|||..|+|.+||++-.+..++....+.+|.||+.|++||..++ +|||||.++|+|+.++..|||+|||++++
T Consensus 338 FYIiTEfM~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkkn---FIHRDLAARNCLVgEnhiVKvADFGLsRl 414 (1157)
T KOG4278|consen 338 FYIITEFMCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHIVKVADFGLSRL 414 (1157)
T ss_pred eEEEEecccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHhh---hhhhhhhhhhccccccceEEeeccchhhh
Confidence 999999999999999999877777888889999999999999999998 99999999999999999999999999998
Q ss_pred CCCCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHh-CCCCCCCCcchHHHHHHHhhcccchh
Q 003158 662 APVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFS 740 (843)
Q Consensus 662 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~ 740 (843)
+..+.++.. ....-.+-|.|||.+....++.|+|||+|||+|||+.| |..||...+ ..+ + +.
T Consensus 415 MtgDTYTAH------AGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGid-lSq-V---------Y~ 477 (1157)
T KOG4278|consen 415 MTGDTYTAH------AGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGID-LSQ-V---------YG 477 (1157)
T ss_pred hcCCceecc------cCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCcc-HHH-H---------HH
Confidence 865443221 11223567999999999999999999999999999999 888886543 111 1 11
Q ss_pred hc-cCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhh
Q 003158 741 VI-DGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWN 787 (843)
Q Consensus 741 ~~-~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~ 787 (843)
++ .+.+-..|+.|++.++++|..||+.+|.+||+++++-+.++.++.
T Consensus 478 LLEkgyRM~~PeGCPpkVYeLMraCW~WsPsDRPsFaeiHqafEtmf~ 525 (1157)
T KOG4278|consen 478 LLEKGYRMDGPEGCPPKVYELMRACWNWSPSDRPSFAEIHQAFETMFS 525 (1157)
T ss_pred HHhccccccCCCCCCHHHHHHHHHHhcCCcccCccHHHHHHHHHHHhc
Confidence 22 223345688999999999999999999999999999999998754
No 86
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=3.8e-39 Score=358.03 Aligned_cols=208 Identities=26% Similarity=0.377 Sum_probs=175.3
Q ss_pred cCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCC---hhhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEE
Q 003158 511 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 586 (843)
Q Consensus 511 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~ 586 (843)
++|++.+.||+|+||+||+|+.. +++.||||++.... ......+.+|+++++.++||||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIM 80 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEE
Confidence 47889999999999999999965 68999999997532 222356788999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCC
Q 003158 587 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 666 (843)
Q Consensus 587 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~ 666 (843)
||+++|+|.+++.... .+++..+..++.|++.||+|||+++ |+||||||+|||++.++.+||+|||++.......
T Consensus 81 E~~~~g~L~~~l~~~~--~l~~~~~~~~~~qi~~aL~~lH~~~---ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~ 155 (364)
T cd05599 81 EYLPGGDMMTLLMKKD--TFTEEETRFYIAETILAIDSIHKLG---YIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSH 155 (364)
T ss_pred CCCCCcHHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCCHHHeEECCCCCEEEeecccceeccccc
Confidence 9999999999997643 5889999999999999999999999 9999999999999999999999999987543211
Q ss_pred CCCccc-------------------------------ceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhC
Q 003158 667 IEGIVP-------------------------------AHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTG 715 (843)
Q Consensus 667 ~~~~~~-------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg 715 (843)
...... ........||+.|+|||++.+..++.++|||||||++|||++|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~G 235 (364)
T cd05599 156 RTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVG 235 (364)
T ss_pred cccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhcC
Confidence 000000 0001124699999999999999999999999999999999999
Q ss_pred CCCCCCCc
Q 003158 716 MQPISHGK 723 (843)
Q Consensus 716 ~~pf~~~~ 723 (843)
..||....
T Consensus 236 ~~Pf~~~~ 243 (364)
T cd05599 236 YPPFCSDN 243 (364)
T ss_pred CCCCCCCC
Confidence 99997543
No 87
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=7.6e-39 Score=357.38 Aligned_cols=207 Identities=22% Similarity=0.319 Sum_probs=173.7
Q ss_pred CCCCCCcccccCCeeEEEEEe-CCCcEEEEEEeccCCh---hhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEEe
Q 003158 512 NFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 587 (843)
Q Consensus 512 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e 587 (843)
.|+..+.||+|+||+||+|+. .+++.||+|++..... ...+.+.+|+++++.++|+||+++++++.+.+..++|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E 81 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD 81 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEe
Confidence 578889999999999999996 4689999999975322 234568899999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCC
Q 003158 588 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 667 (843)
Q Consensus 588 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~ 667 (843)
|+++|+|.+++.... .+++..++.++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++.......
T Consensus 82 ~~~gg~L~~~l~~~~--~~~e~~~~~~~~qi~~aL~~LH~~g---ivHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~~ 156 (381)
T cd05626 82 YIPGGDMMSLLIRME--VFPEVLARFYIAELTLAIESVHKMG---FIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHN 156 (381)
T ss_pred cCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCC---eeecCCcHHHEEECCCCCEEEeeCcCCcccccccc
Confidence 999999999996543 4788888999999999999999999 99999999999999999999999999864321100
Q ss_pred CCc----------------------------------------ccceeeeeecccCCccCchhcccCCCCchhhhHHHHH
Q 003158 668 EGI----------------------------------------VPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGV 707 (843)
Q Consensus 668 ~~~----------------------------------------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~ 707 (843)
... ..........||+.|+|||++.+..++.++|||||||
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG~ 236 (381)
T cd05626 157 SKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGV 236 (381)
T ss_pred cccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeehhh
Confidence 000 0000112346999999999999999999999999999
Q ss_pred HHHHHHhCCCCCCCCc
Q 003158 708 VFLELLTGMQPISHGK 723 (843)
Q Consensus 708 ~l~elltg~~pf~~~~ 723 (843)
++|||++|+.||....
T Consensus 237 il~elltG~~Pf~~~~ 252 (381)
T cd05626 237 ILFEMLVGQPPFLAPT 252 (381)
T ss_pred HHHHHHhCCCCCcCCC
Confidence 9999999999997644
No 88
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=100.00 E-value=1.1e-38 Score=348.05 Aligned_cols=194 Identities=28% Similarity=0.422 Sum_probs=164.9
Q ss_pred CcccccCCeeEEEEEeC-CCcEEEEEEeccCCh---hhHHHHHHHHH-HHHhccCCcccceeeeeecCCcEEEEEecCCC
Q 003158 517 TQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQ-FLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSN 591 (843)
Q Consensus 517 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~-~l~~l~h~nIv~l~~~~~~~~~~~lV~e~~~~ 591 (843)
+.||+|+||+||+|... +|+.||+|++..... ...+++..|.. +++.++||||+++++++.+.+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCC
Confidence 36899999999999965 689999999875322 12344555555 56789999999999999999999999999999
Q ss_pred CCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCCCCcc
Q 003158 592 GTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIV 671 (843)
Q Consensus 592 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~ 671 (843)
|+|.+++... ..+++..+..++.||++||+|||+++ |+||||||+|||+++++.+||+|||+++.....
T Consensus 81 g~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~g---ivH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~------ 149 (323)
T cd05575 81 GELFFHLQRE--RSFPEPRARFYAAEIASALGYLHSLN---IIYRDLKPENILLDSQGHVVLTDFGLCKEGIEH------ 149 (323)
T ss_pred CCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCCHHHeEECCCCcEEEeccCCCcccccC------
Confidence 9999998654 35788899999999999999999999 999999999999999999999999998753221
Q ss_pred cceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCC
Q 003158 672 PAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 722 (843)
Q Consensus 672 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~ 722 (843)
........||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 150 -~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~ 199 (323)
T cd05575 150 -SKTTSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSR 199 (323)
T ss_pred -CCccccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCC
Confidence 11223456899999999999999999999999999999999999999754
No 89
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=100.00 E-value=9e-39 Score=337.38 Aligned_cols=250 Identities=37% Similarity=0.595 Sum_probs=200.5
Q ss_pred CCCcccccCCeeEEEEEeC-----CCcEEEEEEeccCC-hhhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEEec
Q 003158 515 SSTQIGQGGYGKVYKGILP-----DGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 588 (843)
Q Consensus 515 ~~~~lg~G~~g~Vy~~~~~-----~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e~ 588 (843)
+.+.||.|.||.||+|.+. .+..|+||.++... ....+++.+|++.+++++||||++++|++...+..++||||
T Consensus 3 ~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e~ 82 (259)
T PF07714_consen 3 LIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVMEY 82 (259)
T ss_dssp EEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE-
T ss_pred EeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeecccccccccccccccccccccccccccccccc
Confidence 3578999999999999976 25789999997543 33467899999999999999999999999988889999999
Q ss_pred CCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCCC
Q 003158 589 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 668 (843)
Q Consensus 589 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 668 (843)
+++|+|.+++.......+++..+..|+.||++||.|||+++ ++|+||+++||++++++.+||+|||++........
T Consensus 83 ~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~---iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~~- 158 (259)
T PF07714_consen 83 CPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSNN---IIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKSK- 158 (259)
T ss_dssp -TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTT---EEEST-SGGGEEEETTTEEEEESTTTGEETTTSSS-
T ss_pred ccccccccccccccccccccccccccccccccccccccccc---ccccccccccccccccccccccccccccccccccc-
Confidence 99999999998875677999999999999999999999998 99999999999999999999999999987632111
Q ss_pred CcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHh-CCCCCCCCcchHHHHHHHhhcccchhhccCCCC
Q 003158 669 GIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGNMG 747 (843)
Q Consensus 669 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 747 (843)
............|+|||.+.+..++.++||||||+++|||++ |+.||..... .+... .+.++...
T Consensus 159 ----~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~-~~~~~---------~~~~~~~~ 224 (259)
T PF07714_consen 159 ----YKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDN-EEIIE---------KLKQGQRL 224 (259)
T ss_dssp ----EEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCH-HHHHH---------HHHTTEET
T ss_pred ----ccccccccccccccccccccccccccccccccccccccccccccccccccccc-ccccc---------cccccccc
Confidence 112233446778999999999999999999999999999999 7788865532 22111 12223333
Q ss_pred CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 003158 748 SYPSECVEKFIKLALKCCQDETDARPSMSEVMREL 782 (843)
Q Consensus 748 ~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L 782 (843)
..+..++..+.+++..||+.+|++||++.++++.|
T Consensus 225 ~~~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~~L 259 (259)
T PF07714_consen 225 PIPDNCPKDIYSLIQQCWSHDPEKRPSFQEILQEL 259 (259)
T ss_dssp TSBTTSBHHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred eeccchhHHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence 45666788899999999999999999999999875
No 90
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=100.00 E-value=3e-39 Score=356.98 Aligned_cols=208 Identities=26% Similarity=0.342 Sum_probs=177.8
Q ss_pred cCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCCh---hhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEE
Q 003158 511 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 586 (843)
Q Consensus 511 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~ 586 (843)
++|++.+.||+|+||+||+|... +++.||+|++..... ...+.+.+|+++++.++|+||+++++++.+++..++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVM 80 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEE
Confidence 47889999999999999999965 689999999875322 23457889999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCC
Q 003158 587 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 666 (843)
Q Consensus 587 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~ 666 (843)
||+++|+|.+++... ..+++..++.++.||+.||+|||+.+ |+||||||+||+++.++.+||+|||++.......
T Consensus 81 e~~~~~~L~~~l~~~--~~l~~~~~~~i~~qi~~aL~~LH~~g---iiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~ 155 (350)
T cd05573 81 EYMPGGDLMNLLIRK--DVFPEETARFYIAELVLALDSVHKLG---FIHRDIKPDNILIDADGHIKLADFGLCKKMNKAK 155 (350)
T ss_pred cCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHeEECCCCCEEeecCCCCccCcccC
Confidence 999999999999765 45889999999999999999999998 9999999999999999999999999997654322
Q ss_pred CC----------------------CcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCc
Q 003158 667 IE----------------------GIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 723 (843)
Q Consensus 667 ~~----------------------~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~ 723 (843)
.. ............||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~ 234 (350)
T cd05573 156 DREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDT 234 (350)
T ss_pred cccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCCC
Confidence 00 0000011234568999999999999999999999999999999999999997654
No 91
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-39 Score=296.62 Aligned_cols=284 Identities=25% Similarity=0.404 Sum_probs=222.0
Q ss_pred CCCCCCcccccCCeeEEEEE-eCCCcEEEEEEeccCC--hhhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEEec
Q 003158 512 NFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 588 (843)
Q Consensus 512 ~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e~ 588 (843)
+|...++||+|.||+||+|+ ++.++.||+|+...+. ........+|+-+++.++|.|||++++....+...-+|+||
T Consensus 3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe~ 82 (292)
T KOG0662|consen 3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEF 82 (292)
T ss_pred chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHHH
Confidence 46667899999999999999 5568999999876432 23356789999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCCC
Q 003158 589 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 668 (843)
Q Consensus 589 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 668 (843)
| ..+|..+...-. ..++.+.++.++.|+++||.++|+++ +.|||+||.|.|++.+|+.|++|||+|+-+..+
T Consensus 83 c-dqdlkkyfdsln-g~~d~~~~rsfmlqllrgl~fchshn---vlhrdlkpqnllin~ngelkladfglarafgip--- 154 (292)
T KOG0662|consen 83 C-DQDLKKYFDSLN-GDLDPEIVRSFMLQLLRGLGFCHSHN---VLHRDLKPQNLLINRNGELKLADFGLARAFGIP--- 154 (292)
T ss_pred h-hHHHHHHHHhcC-CcCCHHHHHHHHHHHHhhhhhhhhhh---hhhccCCcceEEeccCCcEEecccchhhhcCCc---
Confidence 9 568988886543 45888899999999999999999999 999999999999999999999999999976543
Q ss_pred CcccceeeeeecccCCccCchhcccCC-CCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhccCCCC
Q 003158 669 GIVPAHVSTVVKGTPGYLDPEYFLTHK-LTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMG 747 (843)
Q Consensus 669 ~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 747 (843)
.........|..|++|.++.+.+ |+...|+||-||++.|+.....|..++.+..+++.+++.. ++
T Consensus 155 ----vrcysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~----------lg 220 (292)
T KOG0662|consen 155 ----VRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRL----------LG 220 (292)
T ss_pred ----eEeeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHH----------hC
Confidence 34456667899999999999854 8889999999999999999667777777777777665432 11
Q ss_pred CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCCCCccCCCCCcccCCC
Q 003158 748 SYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSSDV 827 (843)
Q Consensus 748 ~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~sa~e~L~Hp~f~~~~ 827 (843)
...++.++.+.++ .|..--|.+.... .+.+..|.......|+++++|.-+|..|++|+++|+||||+...
T Consensus 221 ~p~ed~wps~t~l------pdyk~yp~ypatt----swsqivp~lns~grdllqkll~cnp~qrisaeaalqhpyf~d~s 290 (292)
T KOG0662|consen 221 TPTEDQWPSMTKL------PDYKPYPIYPATT----SWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQHPYFSDFS 290 (292)
T ss_pred CCccccCCccccC------CCCcccCCccccc----hHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhcCccccccC
Confidence 1222222222221 1111122221111 12223355556677999999999999999999999999998643
No 92
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00 E-value=2.6e-38 Score=350.76 Aligned_cols=208 Identities=26% Similarity=0.364 Sum_probs=175.8
Q ss_pred cCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCCh---hhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEE
Q 003158 511 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 586 (843)
Q Consensus 511 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~ 586 (843)
++|++.+.||+|+||+||+|... +++.||+|++..... .....+.+|+.++..++|+||+++++++.+....++||
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~ 80 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIM 80 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEE
Confidence 47889999999999999999864 689999999875322 22356788999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCC
Q 003158 587 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 666 (843)
Q Consensus 587 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~ 666 (843)
||+++|+|.+++... ..+++..++.++.|++.||+|||+++ |+||||||+|||++.++.+||+|||+++......
T Consensus 81 E~~~gg~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~lH~~g---ivHrDlKp~NILi~~~~~vkL~DFGla~~~~~~~ 155 (363)
T cd05628 81 EFLPGGDMMTLLMKK--DTLTEEETQFYIAETVLAIDSIHQLG---FIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAH 155 (363)
T ss_pred cCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCC---eEecCCCHHHeEECCCCCEEEeeccCcccccccc
Confidence 999999999999764 35889999999999999999999999 9999999999999999999999999997643211
Q ss_pred CCC-------c---------------------ccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCC
Q 003158 667 IEG-------I---------------------VPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQP 718 (843)
Q Consensus 667 ~~~-------~---------------------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~p 718 (843)
... . ..........||+.|+|||++.+..++.++|||||||++|||++|+.|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~P 235 (363)
T cd05628 156 RTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPP 235 (363)
T ss_pred cccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCCC
Confidence 000 0 000011235799999999999999999999999999999999999999
Q ss_pred CCCCc
Q 003158 719 ISHGK 723 (843)
Q Consensus 719 f~~~~ 723 (843)
|....
T Consensus 236 f~~~~ 240 (363)
T cd05628 236 FCSET 240 (363)
T ss_pred CCCCC
Confidence 97543
No 93
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=100.00 E-value=3.8e-38 Score=336.20 Aligned_cols=193 Identities=26% Similarity=0.423 Sum_probs=168.4
Q ss_pred ccccCCeeEEEEEeC-CCcEEEEEEeccCCh---hhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEEecCCCCCH
Q 003158 519 IGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTL 594 (843)
Q Consensus 519 lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e~~~~gsL 594 (843)
||+|+||.||++... +|+.||+|.+..... ...+.+..|++++++++||||+++++++.++...++||||+++++|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L 80 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL 80 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence 699999999999964 689999999864322 2234566799999999999999999999999999999999999999
Q ss_pred HHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCCCCcccce
Q 003158 595 RDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAH 674 (843)
Q Consensus 595 ~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~ 674 (843)
.+++.......+++..+..++.|++.||+|||+.+ |+||||||+||++++++.++|+|||++...... .
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~--------~ 149 (277)
T cd05607 81 KYHIYNVGERGLEMERVIHYSAQITCGILHLHSMD---IVYRDMKPENVLLDDQGNCRLSDLGLAVELKDG--------K 149 (277)
T ss_pred HHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCC---EEEccCChHhEEEcCCCCEEEeeceeeeecCCC--------c
Confidence 99987766667889999999999999999999999 999999999999999999999999998765421 1
Q ss_pred eeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCC
Q 003158 675 VSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 722 (843)
Q Consensus 675 ~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~ 722 (843)
......|+..|+|||++.+..++.++||||+||++|||++|+.||...
T Consensus 150 ~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~ 197 (277)
T cd05607 150 TITQRAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDH 197 (277)
T ss_pred eeeccCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCC
Confidence 123346899999999999988999999999999999999999999643
No 94
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=100.00 E-value=1.9e-38 Score=344.81 Aligned_cols=279 Identities=23% Similarity=0.343 Sum_probs=203.9
Q ss_pred CcccccCCeeEEEEEeC-CCcEEEEEEeccCCh---hhHHHHHHHHHHHHh-ccCCcccceeeeeecCCcEEEEEecCCC
Q 003158 517 TQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSR-LHHRNLVSLVGYCDEEGEQMLVYEFMSN 591 (843)
Q Consensus 517 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~-l~h~nIv~l~~~~~~~~~~~lV~e~~~~ 591 (843)
+.||+|+||+||+|... +++.||+|+++.... ...+.+..|..+++. ++||||+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~ 80 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence 46899999999999965 588999999875321 223456678888876 4899999999999999999999999999
Q ss_pred CCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCCCCcc
Q 003158 592 GTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIV 671 (843)
Q Consensus 592 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~ 671 (843)
|+|.+++... ..+++..+..++.|++.||.|||+++ |+||||||+||++++++.+||+|||+++......
T Consensus 81 g~L~~~l~~~--~~~~~~~~~~~~~qi~~al~~LH~~~---ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~----- 150 (316)
T cd05619 81 GDLMFHIQSC--HKFDLPRATFYAAEIICGLQFLHSKG---IVYRDLKLDNILLDTDGHIKIADFGMCKENMLGD----- 150 (316)
T ss_pred CcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCC---eEeCCCCHHHEEECCCCCEEEccCCcceECCCCC-----
Confidence 9999999654 34788889999999999999999999 9999999999999999999999999987532211
Q ss_pred cceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhccCCCCCCCH
Q 003158 672 PAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPS 751 (843)
Q Consensus 672 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 751 (843)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||..... ...... +......+|.
T Consensus 151 --~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~-~~~~~~----------i~~~~~~~~~ 217 (316)
T cd05619 151 --AKTCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDE-EELFQS----------IRMDNPCYPR 217 (316)
T ss_pred --CceeeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCH-HHHHHH----------HHhCCCCCCc
Confidence 122345689999999999999999999999999999999999999975432 111111 0011122333
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCHH-HHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCCCCccCCCCCcccCCC
Q 003158 752 ECVEKFIKLALKCCQDETDARPSMS-EVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSSDV 827 (843)
Q Consensus 752 ~~~~~l~~l~~~c~~~~p~~RPs~~-~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~sa~e~L~Hp~f~~~~ 827 (843)
....++.+++.+|++.+|.+||++. ++.+. . + +...+ ...+. ....+|.-++...+...+.||....
T Consensus 218 ~~~~~~~~li~~~l~~~P~~R~~~~~~l~~h-~-~---~~~~~---~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (316)
T cd05619 218 WLTREAKDILVKLFVREPERRLGVKGDIRQH-P-F---FREID---WSALE-EREIEPPFKPKVKSANDCSNFDKEF 285 (316)
T ss_pred cCCHHHHHHHHHHhccCHhhcCCChHHHHcC-c-c---cCCCC---HHHHH-hCCCCCCcCCCCCCccchhhcChhh
Confidence 4555667777777777777777775 33211 0 0 00000 00011 1234455666667777777765533
No 95
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=2e-38 Score=351.33 Aligned_cols=290 Identities=23% Similarity=0.315 Sum_probs=212.8
Q ss_pred HHcCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccC--ChhhHHHHHHHHHHHHhccCCcccceeeeeecCC-----
Q 003158 509 ATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEG--SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEG----- 580 (843)
Q Consensus 509 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~----- 580 (843)
..++|++.+.||+|+||.||+|... +|+.||+|++... .....+.+.+|+.+++.++||||+++++++...+
T Consensus 19 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 98 (359)
T cd07876 19 VLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEF 98 (359)
T ss_pred hhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCcccc
Confidence 3578999999999999999999964 6899999998643 2233567889999999999999999999986443
Q ss_pred -cEEEEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeecccc
Q 003158 581 -EQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLS 659 (843)
Q Consensus 581 -~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla 659 (843)
..++||||++ ++|.+.+.. .+++..+..++.|+++||+|||+++ |+||||||+||+++.++.+||+|||++
T Consensus 99 ~~~~lv~e~~~-~~l~~~~~~----~~~~~~~~~~~~qi~~~L~~LH~~~---ivHrDlkp~NIl~~~~~~~kl~Dfg~a 170 (359)
T cd07876 99 QDVYLVMELMD-ANLCQVIHM----ELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLA 170 (359)
T ss_pred ceeEEEEeCCC-cCHHHHHhc----cCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEECCCCCEEEecCCCc
Confidence 4799999996 467776632 3778888999999999999999999 999999999999999999999999999
Q ss_pred ccCCCCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccch
Q 003158 660 RLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMF 739 (843)
Q Consensus 660 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~ 739 (843)
+..... .......||+.|+|||.+.+..++.++|||||||++|||++|+.||...+.... .....
T Consensus 171 ~~~~~~--------~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~-~~~~~------ 235 (359)
T cd07876 171 RTACTN--------FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQ-WNKVI------ 235 (359)
T ss_pred cccccC--------ccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHH------
Confidence 754321 112334688999999999999999999999999999999999999986543222 11110
Q ss_pred hhccCCCCCCCHHHHHHHHHHHHHhcccCCCCCC-CHHHHHHHHH--HhhhhCCCCCCCCCccccCCCCCCCCCCCCCcc
Q 003158 740 SVIDGNMGSYPSECVEKFIKLALKCCQDETDARP-SMSEVMRELE--SIWNMMPESDTKTPEFINSEHTSKEETPPSSSS 816 (843)
Q Consensus 740 ~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RP-s~~~vl~~L~--~~~~~~~~~~~~~~dll~~~L~~dp~~R~sa~e 816 (843)
...+..+.+....+...+.......|.... ++.++..... .........+....+|+.+||++||++|+|++|
T Consensus 236 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e 311 (359)
T cd07876 236 ----EQLGTPSAEFMNRLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDE 311 (359)
T ss_pred ----HhcCCCcHHHHHHHHHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHH
Confidence 112223344444444433333333333221 2222111000 000001112345678999999999999999999
Q ss_pred CCCCCcccC
Q 003158 817 MLKHPYVSS 825 (843)
Q Consensus 817 ~L~Hp~f~~ 825 (843)
+|+||||..
T Consensus 312 ~l~hp~~~~ 320 (359)
T cd07876 312 ALRHPYITV 320 (359)
T ss_pred HhcCchhhh
Confidence 999999964
No 96
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-38 Score=338.26 Aligned_cols=262 Identities=29% Similarity=0.474 Sum_probs=224.9
Q ss_pred HHHHHHcCCCCCCcccccCCeeEEEEEeCC---C--cEEEEEEeccCC-hhhHHHHHHHHHHHHhccCCcccceeeeeec
Q 003158 505 EMALATNNFNSSTQIGQGGYGKVYKGILPD---G--TVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDE 578 (843)
Q Consensus 505 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~---~--~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~ 578 (843)
+..+..+.....++||.|-||.||+|.+.+ | -.||||..+.+. ....+.|..|..+|+.++||||++++|+|.+
T Consensus 383 nyel~Re~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e 462 (974)
T KOG4257|consen 383 NYELRRELITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVE 462 (974)
T ss_pred cceeehhhccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeec
Confidence 334445555667899999999999999643 2 358999998743 4456789999999999999999999999985
Q ss_pred CCcEEEEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccc
Q 003158 579 EGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGL 658 (843)
Q Consensus 579 ~~~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGl 658 (843)
...|+|||.++-|.|..|++.+ +..++......++.||+.||+|||+.. +|||||.++|||+.+..-||++|||+
T Consensus 463 -~P~WivmEL~~~GELr~yLq~n-k~sL~l~tL~ly~~Qi~talaYLeSkr---fVHRDIAaRNiLVsSp~CVKLaDFGL 537 (974)
T KOG4257|consen 463 -QPMWIVMELAPLGELREYLQQN-KDSLPLRTLTLYCYQICTALAYLESKR---FVHRDIAARNILVSSPQCVKLADFGL 537 (974)
T ss_pred -cceeEEEecccchhHHHHHHhc-cccchHHHHHHHHHHHHHHHHHHHhhc---hhhhhhhhhheeecCcceeeecccch
Confidence 5789999999999999999764 456888999999999999999999999 99999999999999999999999999
Q ss_pred cccCCCCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHh-CCCCCCCCcchHHHHHHHhhccc
Q 003158 659 SRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSM 737 (843)
Q Consensus 659 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~ 737 (843)
++.++...++.. +...-..-|||||.+.-.+++.+||||.|||++||++. |..||....+ .+.
T Consensus 538 SR~~ed~~yYka------S~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkN----------sDV 601 (974)
T KOG4257|consen 538 SRYLEDDAYYKA------SRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKN----------SDV 601 (974)
T ss_pred hhhccccchhhc------cccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccc----------cce
Confidence 999876554321 22334567999999999999999999999999999998 9999987553 334
Q ss_pred chhhccCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhh
Q 003158 738 MFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWN 787 (843)
Q Consensus 738 ~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~ 787 (843)
+..+..+.+.+.|+.|++.++.++.+||..+|.+||.+.++...|.++..
T Consensus 602 I~~iEnGeRlP~P~nCPp~LYslmskcWayeP~kRPrftei~~~lsdv~q 651 (974)
T KOG4257|consen 602 IGHIENGERLPCPPNCPPALYSLMSKCWAYEPSKRPRFTEIKAILSDVLQ 651 (974)
T ss_pred EEEecCCCCCCCCCCCChHHHHHHHHHhccCcccCCcHHHHHHHHHHHHH
Confidence 55667788889999999999999999999999999999999999988765
No 97
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.6e-39 Score=330.89 Aligned_cols=201 Identities=28% Similarity=0.464 Sum_probs=181.4
Q ss_pred HcCCCCCCcccccCCeeEEEEEe-CCCcEEEEEEeccCChhhHH---HHHHHHHHHHhccCCcccceeeeeecCCcEEEE
Q 003158 510 TNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQGEK---EFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLV 585 (843)
Q Consensus 510 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~---~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV 585 (843)
..+|++.+.||+|.||+|-+|.. ..|+.||||.+.++...+++ .+.+|+++|+.++||||+.++.+|...+.+.||
T Consensus 52 kHRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIviv 131 (668)
T KOG0611|consen 52 KHRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIV 131 (668)
T ss_pred hhHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEE
Confidence 45788889999999999999995 67999999999876655544 568999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCC
Q 003158 586 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVP 665 (843)
Q Consensus 586 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~ 665 (843)
|||..+|.|+||+.+.+ .+++.+.+.+++||..|+.|+|+++ ++|||||.+|||+|.++++||+|||++..+..
T Consensus 132 MEYaS~GeLYDYiSer~--~LsErEaRhfFRQIvSAVhYCHknr---VvHRDLKLENILLD~N~NiKIADFGLSNly~~- 205 (668)
T KOG0611|consen 132 MEYASGGELYDYISERG--SLSEREARHFFRQIVSAVHYCHKNR---VVHRDLKLENILLDQNNNIKIADFGLSNLYAD- 205 (668)
T ss_pred EEecCCccHHHHHHHhc--cccHHHHHHHHHHHHHHHHHHhhcc---ceecccchhheeecCCCCeeeeccchhhhhcc-
Confidence 99999999999997754 4899999999999999999999999 99999999999999999999999999987653
Q ss_pred CCCCcccceeeeeecccCCccCchhcccCCCC-chhhhHHHHHHHHHHHhCCCCCCCCc
Q 003158 666 DIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLT-DKSDVYSLGVVFLELLTGMQPISHGK 723 (843)
Q Consensus 666 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~sDvwS~G~~l~elltg~~pf~~~~ 723 (843)
.......+|++-|.+||++.+.+|. +.+|-||+|++||.|+.|..||++.+
T Consensus 206 -------~kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~D 257 (668)
T KOG0611|consen 206 -------KKFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRD 257 (668)
T ss_pred -------ccHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCch
Confidence 3455678899999999999998874 67999999999999999999997643
No 98
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=100.00 E-value=3.1e-38 Score=333.69 Aligned_cols=256 Identities=25% Similarity=0.441 Sum_probs=210.8
Q ss_pred HHcCCCCCCcccccCCeeEEEEEeCCCcEEEEEEeccCChhhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEEec
Q 003158 509 ATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 588 (843)
Q Consensus 509 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e~ 588 (843)
..++|++.++||+|+||.||+|...++..||+|.+.... ...+.+.+|+.+++.++|+||+++++++.+.+..++||||
T Consensus 4 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 82 (261)
T cd05072 4 PRESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGT-MSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEY 82 (261)
T ss_pred chHHeEEeeecCCcCCceEEEEEecCCceEEEEEccCCc-hhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEec
Confidence 346788999999999999999998888899999987533 2356889999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCCC
Q 003158 589 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 668 (843)
Q Consensus 589 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 668 (843)
+++|+|.++++......+++..++.++.|+++||+|||+.+ ++||||||+||++++++.+||+|||++........
T Consensus 83 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~---i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~- 158 (261)
T cd05072 83 MAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKN---YIHRDLRAANVLVSESLMCKIADFGLARVIEDNEY- 158 (261)
T ss_pred CCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccccchhhEEecCCCcEEECCCccceecCCCce-
Confidence 99999999997765567888999999999999999999998 99999999999999999999999999986543210
Q ss_pred CcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHh-CCCCCCCCcchHHHHHHHhhcccchhhccCCCC
Q 003158 669 GIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGNMG 747 (843)
Q Consensus 669 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 747 (843)
.......++..|+|||++.+..++.++|||||||++|||++ |+.||...... +.... .. .....
T Consensus 159 -----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~-~~~~~-~~--------~~~~~ 223 (261)
T cd05072 159 -----TAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNS-DVMSA-LQ--------RGYRM 223 (261)
T ss_pred -----eccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHH-HHHHH-HH--------cCCCC
Confidence 11122345678999999998889999999999999999998 99998654321 11111 11 11111
Q ss_pred CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 003158 748 SYPSECVEKFIKLALKCCQDETDARPSMSEVMRELES 784 (843)
Q Consensus 748 ~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~ 784 (843)
+.+..++.++.+++.+|+..+|++||+++++.+.|++
T Consensus 224 ~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 260 (261)
T cd05072 224 PRMENCPDELYDIMKTCWKEKAEERPTFDYLQSVLDD 260 (261)
T ss_pred CCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 2233456788999999999999999999999998875
No 99
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=100.00 E-value=6.3e-39 Score=358.44 Aligned_cols=207 Identities=22% Similarity=0.307 Sum_probs=173.4
Q ss_pred CCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCCh---hhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEEe
Q 003158 512 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 587 (843)
Q Consensus 512 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e 587 (843)
+|+..+.||+|+||+||+|+.. +++.||+|++..... ...+.+.+|+++++.++|+||+++++++.+.+..++|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E 81 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD 81 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEe
Confidence 5888999999999999999964 689999999875322 234578899999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCC
Q 003158 588 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 667 (843)
Q Consensus 588 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~ 667 (843)
|+++|+|.+++.+. ..+++..++.++.||+.||+|||+++ |+||||||+|||++.++.+||+|||++........
T Consensus 82 ~~~gg~L~~~l~~~--~~~~e~~~~~~~~qi~~al~~lH~~~---ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~~ 156 (382)
T cd05625 82 YIPGGDMMSLLIRM--GIFPEDLARFYIAELTCAVESVHKMG---FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHD 156 (382)
T ss_pred CCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCCEEEeECCCCcccccccc
Confidence 99999999999664 34788888999999999999999999 99999999999999999999999999854321000
Q ss_pred CC----------------------------------------cccceeeeeecccCCccCchhcccCCCCchhhhHHHHH
Q 003158 668 EG----------------------------------------IVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGV 707 (843)
Q Consensus 668 ~~----------------------------------------~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~ 707 (843)
.. ...........||+.|+|||++.+..++.++||||+||
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGv 236 (382)
T cd05625 157 SKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGV 236 (382)
T ss_pred ccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEechH
Confidence 00 00000112346899999999999999999999999999
Q ss_pred HHHHHHhCCCCCCCCc
Q 003158 708 VFLELLTGMQPISHGK 723 (843)
Q Consensus 708 ~l~elltg~~pf~~~~ 723 (843)
++|||++|+.||....
T Consensus 237 il~elltG~~Pf~~~~ 252 (382)
T cd05625 237 ILYEMLVGQPPFLAQT 252 (382)
T ss_pred HHHHHHhCCCCCCCCC
Confidence 9999999999997543
No 100
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=100.00 E-value=5.5e-38 Score=336.03 Aligned_cols=256 Identities=31% Similarity=0.524 Sum_probs=210.0
Q ss_pred cCCCCCCcccccCCeeEEEEEeCC------CcEEEEEEeccCCh-hhHHHHHHHHHHHHhccCCcccceeeeeecCCcEE
Q 003158 511 NNFNSSTQIGQGGYGKVYKGILPD------GTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQM 583 (843)
Q Consensus 511 ~~~~~~~~lg~G~~g~Vy~~~~~~------~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~ 583 (843)
++|++.+.||+|+||.||+|.... ...||+|.+..... ....++.+|+++++.++||||+++++++...+..+
T Consensus 5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~ 84 (283)
T cd05048 5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPTC 84 (283)
T ss_pred HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCceE
Confidence 468889999999999999998642 25799999875432 33467899999999999999999999999999999
Q ss_pred EEEecCCCCCHHHHHhhcCC--------------CCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCC
Q 003158 584 LVYEFMSNGTLRDQLSAKSK--------------EPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKF 649 (843)
Q Consensus 584 lV~e~~~~gsL~~~l~~~~~--------------~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~ 649 (843)
++|||+++|+|.+++..... ..+++..++.++.|++.||+|||+.+ ++||||||+||++++++
T Consensus 85 ~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~---i~H~dlkp~Nil~~~~~ 161 (283)
T cd05048 85 MLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHH---FVHRDLAARNCLVGEGL 161 (283)
T ss_pred EEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccccccceEEEcCCC
Confidence 99999999999999975422 45788889999999999999999999 99999999999999999
Q ss_pred cEEEeeccccccCCCCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHh-CCCCCCCCcchHHH
Q 003158 650 TAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVRE 728 (843)
Q Consensus 650 ~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~ellt-g~~pf~~~~~~~~~ 728 (843)
.+||+|||+++.....+. ........+++.|+|||.+.+..++.++|||||||++|||++ |..||..... .+
T Consensus 162 ~~~L~dfg~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~-~~- 234 (283)
T cd05048 162 TVKISDFGLSRDIYSADY-----YRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSN-QE- 234 (283)
T ss_pred cEEECCCcceeecccccc-----ccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCH-HH-
Confidence 999999999976532221 111223346788999999998899999999999999999998 9999975432 11
Q ss_pred HHHHhhcccchhhccCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 003158 729 VNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELES 784 (843)
Q Consensus 729 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~ 784 (843)
.. ..+..+.....+..++.++.+++.+||+.+|.+||++.++++.|+.
T Consensus 235 ~~--------~~i~~~~~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05048 235 VI--------EMIRSRQLLPCPEDCPARVYALMIECWNEIPARRPRFKDIHTRLRS 282 (283)
T ss_pred HH--------HHHHcCCcCCCcccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhc
Confidence 11 1122233334567788999999999999999999999999999875
No 101
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00 E-value=3.6e-38 Score=350.65 Aligned_cols=261 Identities=25% Similarity=0.408 Sum_probs=206.9
Q ss_pred HHHHcCCCCCCcccccCCeeEEEEEe------CCCcEEEEEEeccCC-hhhHHHHHHHHHHHHhc-cCCcccceeeeeec
Q 003158 507 ALATNNFNSSTQIGQGGYGKVYKGIL------PDGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDE 578 (843)
Q Consensus 507 ~~~~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~ 578 (843)
....++|++.+.||+|+||+||+|.+ .++..||||+++... ....+.+.+|+++++.+ +||||++++++|.+
T Consensus 31 ~~~~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~ 110 (375)
T cd05104 31 EFPRNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTV 110 (375)
T ss_pred ccchHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeecc
Confidence 33456788899999999999999973 236689999987533 23356788999999999 89999999999999
Q ss_pred CCcEEEEEecCCCCCHHHHHhhcC--------------------------------------------------------
Q 003158 579 EGEQMLVYEFMSNGTLRDQLSAKS-------------------------------------------------------- 602 (843)
Q Consensus 579 ~~~~~lV~e~~~~gsL~~~l~~~~-------------------------------------------------------- 602 (843)
.+..++||||+++|+|.++++...
T Consensus 111 ~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (375)
T cd05104 111 GGPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVR 190 (375)
T ss_pred CCcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccccc
Confidence 999999999999999999986532
Q ss_pred -----------------CCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCC
Q 003158 603 -----------------KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVP 665 (843)
Q Consensus 603 -----------------~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~ 665 (843)
...+++..+..++.||++||+|||+.+ |+||||||+|||+++++.+||+|||+++.....
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~ 267 (375)
T cd05104 191 SGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKN---CIHRDLAARNILLTHGRITKICDFGLARDIRND 267 (375)
T ss_pred cceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCchhhEEEECCCcEEEecCccceeccCc
Confidence 124678889999999999999999998 999999999999999999999999999765422
Q ss_pred CCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHh-CCCCCCCCcchHHHHHHHhhcccchhhccC
Q 003158 666 DIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDG 744 (843)
Q Consensus 666 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 744 (843)
.. ........++..|+|||++.+..++.++|||||||++|||++ |..||............ . ..+
T Consensus 268 ~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~~~~~~-~--------~~~ 333 (375)
T cd05104 268 SN-----YVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDSKFYKM-I--------KEG 333 (375)
T ss_pred cc-----ccccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchHHHHHH-H--------HhC
Confidence 10 011122335678999999999999999999999999999998 88888654322111111 1 111
Q ss_pred CCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 003158 745 NMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELES 784 (843)
Q Consensus 745 ~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~ 784 (843)
.....+...+.++.+++..||+.+|++||++.++++.|++
T Consensus 334 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~l~~ 373 (375)
T cd05104 334 YRMLSPECAPSEMYDIMKSCWDADPLKRPTFKQIVQLIEQ 373 (375)
T ss_pred ccCCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHh
Confidence 1112233445788999999999999999999999999886
No 102
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00 E-value=1.3e-38 Score=351.99 Aligned_cols=255 Identities=28% Similarity=0.423 Sum_probs=195.0
Q ss_pred CCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCCh-hhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEEecC
Q 003158 512 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFM 589 (843)
Q Consensus 512 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e~~ 589 (843)
+|+..+.||+|+||+||+|+.. +++.||||++..... ...+.+.+|+++++.++|+||+++++++.+.+..++||||+
T Consensus 75 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 154 (353)
T PLN00034 75 ELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLEFM 154 (353)
T ss_pred HHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEEecC
Confidence 4556788999999999999964 689999999865432 33467899999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCCCC
Q 003158 590 SNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEG 669 (843)
Q Consensus 590 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~ 669 (843)
++|+|.+.. ...+..+..++.||+.||+|||+++ |+||||||+|||+++++.+||+|||+++......
T Consensus 155 ~~~~L~~~~------~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~--- 222 (353)
T PLN00034 155 DGGSLEGTH------IADEQFLADVARQILSGIAYLHRRH---IVHRDIKPSNLLINSAKNVKIADFGVSRILAQTM--- 222 (353)
T ss_pred CCCcccccc------cCCHHHHHHHHHHHHHHHHHHHHCC---EeecCCCHHHEEEcCCCCEEEcccccceeccccc---
Confidence 999986532 2456777889999999999999999 9999999999999999999999999998654211
Q ss_pred cccceeeeeecccCCccCchhccc-----CCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhccC
Q 003158 670 IVPAHVSTVVKGTPGYLDPEYFLT-----HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDG 744 (843)
Q Consensus 670 ~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 744 (843)
.......||..|+|||++.. ...+.++|||||||++|||++|+.||...... ++
T Consensus 223 ----~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~-~~---------------- 281 (353)
T PLN00034 223 ----DPCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQG-DW---------------- 281 (353)
T ss_pred ----ccccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCc-cH----------------
Confidence 11233468999999998853 23456899999999999999999999632210 00
Q ss_pred CCCCCCHHHHHHHHHHHHH-hcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCCCCccCCCCCcc
Q 003158 745 NMGSYPSECVEKFIKLALK-CCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYV 823 (843)
Q Consensus 745 ~~~~~~~~~~~~l~~l~~~-c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~sa~e~L~Hp~f 823 (843)
..++.. +....+. .+ ......+.+|+.+||..||++|+|++|+++||||
T Consensus 282 -------------~~~~~~~~~~~~~~-~~----------------~~~~~~l~~li~~~l~~~P~~Rpt~~ell~hp~~ 331 (353)
T PLN00034 282 -------------ASLMCAICMSQPPE-AP----------------ATASREFRHFISCCLQREPAKRWSAMQLLQHPFI 331 (353)
T ss_pred -------------HHHHHHHhccCCCC-CC----------------CccCHHHHHHHHHHccCChhhCcCHHHHhcCccc
Confidence 000000 0111111 00 1112234467888889999999999999999999
Q ss_pred cCCCCC
Q 003158 824 SSDVSG 829 (843)
Q Consensus 824 ~~~~~~ 829 (843)
......
T Consensus 332 ~~~~~~ 337 (353)
T PLN00034 332 LRAQPG 337 (353)
T ss_pred ccCCcc
Confidence 876544
No 103
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00 E-value=3.2e-38 Score=350.70 Aligned_cols=264 Identities=25% Similarity=0.390 Sum_probs=208.7
Q ss_pred HHHHHcCCCCCCcccccCCeeEEEEEeC------CCcEEEEEEeccCC-hhhHHHHHHHHHHHHhc-cCCcccceeeeee
Q 003158 506 MALATNNFNSSTQIGQGGYGKVYKGILP------DGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRL-HHRNLVSLVGYCD 577 (843)
Q Consensus 506 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~ 577 (843)
+....++|++.+.||+|+||.||+|+.. ++..||+|++.... ......+.+|+++++.+ +|+||++++++|.
T Consensus 33 ~~~~~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~ 112 (374)
T cd05106 33 WEFPRDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACT 112 (374)
T ss_pred ccccHHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEec
Confidence 3445668999999999999999999842 24589999997543 23345788999999999 8999999999999
Q ss_pred cCCcEEEEEecCCCCCHHHHHhhcC-------------------------------------------------------
Q 003158 578 EEGEQMLVYEFMSNGTLRDQLSAKS------------------------------------------------------- 602 (843)
Q Consensus 578 ~~~~~~lV~e~~~~gsL~~~l~~~~------------------------------------------------------- 602 (843)
..+..++||||+++|+|.++++...
T Consensus 113 ~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (374)
T cd05106 113 HGGPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSS 192 (374)
T ss_pred CCCCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCcccccc
Confidence 9999999999999999999986421
Q ss_pred -------------CCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCCCC
Q 003158 603 -------------KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEG 669 (843)
Q Consensus 603 -------------~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~ 669 (843)
..++++..+++++.||++||+|||+++ |+||||||+|||+++++.+||+|||+++.......
T Consensus 193 ~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~g---iiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~-- 267 (374)
T cd05106 193 QSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKN---CIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSN-- 267 (374)
T ss_pred ccccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCC---EEeccCchheEEEeCCCeEEEeeceeeeeccCCcc--
Confidence 124778889999999999999999998 99999999999999999999999999976532210
Q ss_pred cccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHh-CCCCCCCCcchHHHHHHHhhcccchhhccCCCCC
Q 003158 670 IVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGS 748 (843)
Q Consensus 670 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 748 (843)
........++..|+|||++.+..++.++|||||||++|||++ |+.||............ . ..+....
T Consensus 268 ---~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~~~~~-~--------~~~~~~~ 335 (374)
T cd05106 268 ---YVVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSKFYKM-V--------KRGYQMS 335 (374)
T ss_pred ---eeeccCCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccHHHHHH-H--------HcccCcc
Confidence 111122335678999999999999999999999999999997 99999754321111111 0 0111112
Q ss_pred CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhh
Q 003158 749 YPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIW 786 (843)
Q Consensus 749 ~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~ 786 (843)
.+...+.++.+++.+||+.+|.+||++.++++.|+++.
T Consensus 336 ~~~~~~~~l~~li~~cl~~dp~~RPs~~~l~~~l~~~~ 373 (374)
T cd05106 336 RPDFAPPEIYSIMKMCWNLEPTERPTFSQISQLIQRQL 373 (374)
T ss_pred CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHh
Confidence 23334678899999999999999999999999998753
No 104
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00 E-value=7.4e-39 Score=349.17 Aligned_cols=195 Identities=26% Similarity=0.412 Sum_probs=167.3
Q ss_pred CcccccCCeeEEEEEeC-CCcEEEEEEeccCCh---hhHHHHHHHHHHHHhc-cCCcccceeeeeecCCcEEEEEecCCC
Q 003158 517 TQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQMLVYEFMSN 591 (843)
Q Consensus 517 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~lV~e~~~~ 591 (843)
+.||+|+||.||+|... +++.||+|++..... ...+.+..|.++++.+ +||||+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~ 80 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG 80 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence 46999999999999965 588999999875322 2234577888888866 799999999999999999999999999
Q ss_pred CCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCCCCcc
Q 003158 592 GTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIV 671 (843)
Q Consensus 592 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~ 671 (843)
|+|.+++.... .+++..+..++.|+++||.|||+++ |+||||||+||++++++.+||+|||++.......
T Consensus 81 ~~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~----- 150 (321)
T cd05591 81 GDLMFQIQRSR--KFDEPRSRFYAAEVTLALMFLHRHG---VIYRDLKLDNILLDAEGHCKLADFGMCKEGILNG----- 150 (321)
T ss_pred CcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHeEECCCCCEEEeecccceecccCC-----
Confidence 99999986543 4788899999999999999999999 9999999999999999999999999987533211
Q ss_pred cceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCc
Q 003158 672 PAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 723 (843)
Q Consensus 672 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~ 723 (843)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 151 --~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~ 200 (321)
T cd05591 151 --VTTTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADN 200 (321)
T ss_pred --ccccccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCC
Confidence 11234568999999999999999999999999999999999999997544
No 105
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00 E-value=2e-38 Score=344.79 Aligned_cols=237 Identities=22% Similarity=0.341 Sum_probs=191.2
Q ss_pred CcccccCCeeEEEEEeC-CCcEEEEEEeccCCh---hhHHHHHHHHHHHHhc-cCCcccceeeeeecCCcEEEEEecCCC
Q 003158 517 TQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQMLVYEFMSN 591 (843)
Q Consensus 517 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~lV~e~~~~ 591 (843)
+.||+|+||+||+|... +++.||+|+++.... ...+.+..|..++... +||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g 80 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 36999999999999965 588999999875321 2234456677777654 899999999999999999999999999
Q ss_pred CCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCCCCcc
Q 003158 592 GTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIV 671 (843)
Q Consensus 592 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~ 671 (843)
|+|.+++.... .+++..+..++.|++.||+|||+++ |+||||||+||+++.++.+||+|||+++......
T Consensus 81 g~L~~~~~~~~--~~~~~~~~~~~~qi~~al~~LH~~~---ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~----- 150 (316)
T cd05592 81 GDLMFHIQSSG--RFDEARARFYAAEIICGLQFLHKKG---IIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGE----- 150 (316)
T ss_pred CcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---EEeCCCCHHHeEECCCCCEEEccCcCCeECCCCC-----
Confidence 99999986543 5888899999999999999999998 9999999999999999999999999997543211
Q ss_pred cceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhccCCCCCCCH
Q 003158 672 PAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPS 751 (843)
Q Consensus 672 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 751 (843)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||..... .+.... +....+.+|.
T Consensus 151 --~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~-~~~~~~----------i~~~~~~~~~ 217 (316)
T cd05592 151 --GKASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDE-DELFDS----------ILNDRPHFPR 217 (316)
T ss_pred --CccccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCH-HHHHHH----------HHcCCCCCCC
Confidence 122345689999999999999999999999999999999999999975442 111111 1112233455
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCHH
Q 003158 752 ECVEKFIKLALKCCQDETDARPSMS 776 (843)
Q Consensus 752 ~~~~~l~~l~~~c~~~~p~~RPs~~ 776 (843)
.++.++.+++..||+.+|.+||++.
T Consensus 218 ~~~~~~~~ll~~~l~~~P~~R~~~~ 242 (316)
T cd05592 218 WISKEAKDCLSKLFERDPTKRLGVD 242 (316)
T ss_pred CCCHHHHHHHHHHccCCHHHcCCCh
Confidence 5667788899999999999999875
No 106
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=100.00 E-value=1.5e-38 Score=345.71 Aligned_cols=194 Identities=26% Similarity=0.409 Sum_probs=165.9
Q ss_pred CcccccCCeeEEEEEeC-CCcEEEEEEeccCCh---hhHHHHHHHHHHHHhc-cCCcccceeeeeecCCcEEEEEecCCC
Q 003158 517 TQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQMLVYEFMSN 591 (843)
Q Consensus 517 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~lV~e~~~~ 591 (843)
+.||+|+||.||+|... +|+.||+|+++.... ...+.+..|.+++... +||||+++++++.+.+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~ 80 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence 46999999999999965 689999999875321 2234567788887754 899999999999999999999999999
Q ss_pred CCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCCCCcc
Q 003158 592 GTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIV 671 (843)
Q Consensus 592 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~ 671 (843)
|+|.+++... ..+++..+..++.|+++||+|||+++ |+||||||+||++++++.+||+|||+++.....
T Consensus 81 g~L~~~i~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~---ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~------ 149 (316)
T cd05620 81 GDLMFHIQDK--GRFDLYRATFYAAEIVCGLQFLHSKG---IIYRDLKLDNVMLDRDGHIKIADFGMCKENVFG------ 149 (316)
T ss_pred CcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHeEECCCCCEEeCccCCCeecccC------
Confidence 9999998664 34788889999999999999999999 999999999999999999999999998743211
Q ss_pred cceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCC
Q 003158 672 PAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 722 (843)
Q Consensus 672 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~ 722 (843)
........||+.|+|||++.+..++.++||||+||++|||++|+.||...
T Consensus 150 -~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~ 199 (316)
T cd05620 150 -DNRASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGD 199 (316)
T ss_pred -CCceeccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCC
Confidence 11223456899999999999999999999999999999999999999654
No 107
>PTZ00036 glycogen synthase kinase; Provisional
Probab=100.00 E-value=9.1e-39 Score=361.92 Aligned_cols=281 Identities=22% Similarity=0.328 Sum_probs=201.0
Q ss_pred HcCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCChhhHHHHHHHHHHHHhccCCcccceeeeeecC--------C
Q 003158 510 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE--------G 580 (843)
Q Consensus 510 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~--------~ 580 (843)
..+|++.+.||+|+||+||+|... +++.||||++.... ....+|+.+++.++||||+++++++... .
T Consensus 65 ~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~----~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~~ 140 (440)
T PTZ00036 65 NKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP----QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKNI 140 (440)
T ss_pred CCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc----chHHHHHHHHHhcCCCCCcceeeeEeecccccCCCce
Confidence 457999999999999999999964 68999999886432 2345799999999999999999886321 2
Q ss_pred cEEEEEecCCCCCHHHHHhh--cCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCC-cEEEeecc
Q 003158 581 EQMLVYEFMSNGTLRDQLSA--KSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKF-TAKVADFG 657 (843)
Q Consensus 581 ~~~lV~e~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~-~~kl~DfG 657 (843)
..++||||++ ++|.+++.. .....+++..++.++.||++||+|||+++ |+||||||+|||++.++ .+||+|||
T Consensus 141 ~l~lvmE~~~-~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~---IiHrDLKp~NILl~~~~~~vkL~DFG 216 (440)
T PTZ00036 141 FLNVVMEFIP-QTVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKF---ICHRDLKPQNLLIDPNTHTLKLCDFG 216 (440)
T ss_pred EEEEEEecCC-ccHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCcCHHHEEEcCCCCceeeeccc
Confidence 4679999996 578777753 23456889999999999999999999999 99999999999999665 79999999
Q ss_pred ccccCCCCCCCCcccceeeeeecccCCccCchhccc-CCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcc
Q 003158 658 LSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSS 736 (843)
Q Consensus 658 la~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~ 736 (843)
+|+...... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||........ ......
T Consensus 217 la~~~~~~~--------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~-~~~i~~-- 285 (440)
T PTZ00036 217 SAKNLLAGQ--------RSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQ-LVRIIQ-- 285 (440)
T ss_pred cchhccCCC--------CcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHH-HHHHHH--
Confidence 998654221 1223468999999999876 4689999999999999999999999976543221 111110
Q ss_pred cchhhccCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCC-CCCCCCCccccCCCCCCCCCCCCCc
Q 003158 737 MMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMP-ESDTKTPEFINSEHTSKEETPPSSS 815 (843)
Q Consensus 737 ~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~-~~~~~~~dll~~~L~~dp~~R~sa~ 815 (843)
. .+..+.+....+..-.. -+ .-|...+ .+ + ...++ .....+.+||.+||++||++|+||.
T Consensus 286 ----~----~~~p~~~~~~~~~~~~~-~~-~~~~~~~--~~----l---~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~ 346 (440)
T PTZ00036 286 ----V----LGTPTEDQLKEMNPNYA-DI-KFPDVKP--KD----L---KKVFPKGTPDDAINFISQFLKYEPLKRLNPI 346 (440)
T ss_pred ----H----hCCCCHHHHHHhchhhh-cc-cCCccCc--hh----H---HHHhccCCCHHHHHHHHHHCCCChhHCcCHH
Confidence 0 11111111110000000 00 0011110 11 1 11122 2345567999999999999999999
Q ss_pred cCCCCCcccCCCC
Q 003158 816 SMLKHPYVSSDVS 828 (843)
Q Consensus 816 e~L~Hp~f~~~~~ 828 (843)
|+|+||||..-..
T Consensus 347 e~l~hp~f~~~~~ 359 (440)
T PTZ00036 347 EALADPFFDDLRD 359 (440)
T ss_pred HHhCChhHHhhhc
Confidence 9999999976433
No 108
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=100.00 E-value=6.5e-38 Score=330.31 Aligned_cols=251 Identities=29% Similarity=0.481 Sum_probs=205.8
Q ss_pred cCCCCCCcccccCCeeEEEEEeCCCcEEEEEEeccCChhhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEEecCC
Q 003158 511 NNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMS 590 (843)
Q Consensus 511 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e~~~ 590 (843)
++|++.+.||+|+||.||+|.+.++..+|+|.+.... ...+++.+|++++++++||||+++++++.+.+..++||||++
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~ 82 (256)
T cd05114 4 SELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEGA-MSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFME 82 (256)
T ss_pred HHcEEeeEecCCcCceEEEEEeccCceEEEEecccCC-ccHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEcCC
Confidence 4678889999999999999998888899999887433 334678899999999999999999999999999999999999
Q ss_pred CCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCCCCc
Q 003158 591 NGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGI 670 (843)
Q Consensus 591 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~ 670 (843)
+|+|.++++... ..+++..++.++.|++.||+|||+.+ |+||||||+||++++++.+||+|||.++.......
T Consensus 83 ~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~--- 155 (256)
T cd05114 83 NGCLLNYLRQRQ-GKLSKDMLLSMCQDVCEGMEYLERNS---FIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEY--- 155 (256)
T ss_pred CCcHHHHHHhCc-cCCCHHHHHHHHHHHHHHHHHHHHCC---ccccccCcceEEEcCCCeEEECCCCCccccCCCce---
Confidence 999999997543 35889999999999999999999999 99999999999999999999999999876532211
Q ss_pred ccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHh-CCCCCCCCcchHHHHHHHhhcccchhhccCCCCCC
Q 003158 671 VPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSY 749 (843)
Q Consensus 671 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 749 (843)
.......++..|+|||.+.+..++.++||||||+++|||++ |+.||...... +.... +..+.....
T Consensus 156 ---~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~-~~~~~---------i~~~~~~~~ 222 (256)
T cd05114 156 ---TSSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNY-EVVEM---------ISRGFRLYR 222 (256)
T ss_pred ---eccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHH-HHHHH---------HHCCCCCCC
Confidence 11122235668999999998889999999999999999999 88998755432 11111 111122223
Q ss_pred CHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 003158 750 PSECVEKFIKLALKCCQDETDARPSMSEVMREL 782 (843)
Q Consensus 750 ~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L 782 (843)
|...+..+.+++.+||+.+|++||++.++++.|
T Consensus 223 ~~~~~~~~~~li~~c~~~~p~~Rps~~~l~~~l 255 (256)
T cd05114 223 PKLASMTVYEVMYSCWHEKPEGRPTFAELLRAI 255 (256)
T ss_pred CCCCCHHHHHHHHHHccCCcccCcCHHHHHHhh
Confidence 444567889999999999999999999998875
No 109
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=100.00 E-value=1.6e-38 Score=347.16 Aligned_cols=193 Identities=24% Similarity=0.376 Sum_probs=167.2
Q ss_pred CcccccCCeeEEEEEeC-CCcEEEEEEeccCCh---hhHHHHHHHHHHHHhc-cCCcccceeeeeecCCcEEEEEecCCC
Q 003158 517 TQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQMLVYEFMSN 591 (843)
Q Consensus 517 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~lV~e~~~~ 591 (843)
+.||+|+||+||+|... +++.||+|++..... ...+.+.+|+.++.++ +||||+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG 80 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence 46999999999999964 688999999985432 2235678899999888 699999999999999999999999999
Q ss_pred CCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCCCCcc
Q 003158 592 GTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIV 671 (843)
Q Consensus 592 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~ 671 (843)
|+|.+++.... .+++..++.++.|+++||+|||+++ |+||||||+|||+++++.+||+|||+++.....
T Consensus 81 ~~L~~~~~~~~--~l~~~~~~~~~~qi~~al~~lH~~~---ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~------ 149 (327)
T cd05617 81 GDLMFHMQRQR--KLPEEHARFYAAEICIALNFLHERG---IIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGP------ 149 (327)
T ss_pred CcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHEEEeCCCCEEEeccccceeccCC------
Confidence 99999886543 5889999999999999999999999 999999999999999999999999998753211
Q ss_pred cceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCC
Q 003158 672 PAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISH 721 (843)
Q Consensus 672 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~ 721 (843)
........||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 150 -~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~ 198 (327)
T cd05617 150 -GDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDI 198 (327)
T ss_pred -CCceecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCc
Confidence 1122345689999999999999999999999999999999999999963
No 110
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=100.00 E-value=3.3e-38 Score=333.45 Aligned_cols=256 Identities=29% Similarity=0.502 Sum_probs=215.8
Q ss_pred HHcCCCCCCcccccCCeeEEEEEeCCCcEEEEEEeccCChhhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEEec
Q 003158 509 ATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 588 (843)
Q Consensus 509 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e~ 588 (843)
...+|+..+.||.|+||+||+|...+++.+|+|.+.........++.+|+.+++.++|+||+++++++.+.+..++||||
T Consensus 4 ~~~~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 83 (261)
T cd05148 4 PREEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITEL 83 (261)
T ss_pred cHHHHHHhhhhccCCCccEEEeEecCCCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEEee
Confidence 45678889999999999999999888999999999876655567889999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCCC
Q 003158 589 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 668 (843)
Q Consensus 589 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 668 (843)
+++++|.+++.......+++..++.++.|++.||.|||+.+ |+||||||+||++++++.+||+|||.+.......
T Consensus 84 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~---i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~-- 158 (261)
T cd05148 84 MEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQN---SIHRDLAARNILVGEDLVCKVADFGLARLIKEDV-- 158 (261)
T ss_pred cccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccccCcceEEEcCCceEEEccccchhhcCCcc--
Confidence 99999999998766667899999999999999999999998 9999999999999999999999999997653221
Q ss_pred CcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHh-CCCCCCCCcchHHHHHHHhhcccchhhccCCCC
Q 003158 669 GIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGNMG 747 (843)
Q Consensus 669 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 747 (843)
.......++..|+|||.+.+..++.++||||||+++|+|++ |+.||...... .... .+..+...
T Consensus 159 -----~~~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~-~~~~---------~~~~~~~~ 223 (261)
T cd05148 159 -----YLSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNH-EVYD---------QITAGYRM 223 (261)
T ss_pred -----ccccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHH-HHHH---------HHHhCCcC
Confidence 11122335678999999998899999999999999999998 88999654321 1111 11122223
Q ss_pred CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 003158 748 SYPSECVEKFIKLALKCCQDETDARPSMSEVMRELES 784 (843)
Q Consensus 748 ~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~ 784 (843)
+.+..+++.+.+++.+||+.+|.+||++.++.+.|+.
T Consensus 224 ~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~~ 260 (261)
T cd05148 224 PCPAKCPQEIYKIMLECWAAEPEDRPSFKALREELDN 260 (261)
T ss_pred CCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhc
Confidence 3455677889999999999999999999999999875
No 111
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=100.00 E-value=2.1e-38 Score=353.55 Aligned_cols=208 Identities=25% Similarity=0.338 Sum_probs=173.6
Q ss_pred cCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCC---hhhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEE
Q 003158 511 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 586 (843)
Q Consensus 511 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~ 586 (843)
++|++.+.||+|+||+||+|... +++.||||++.... ....+.+.+|+++++.++||||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIM 80 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEE
Confidence 46888999999999999999864 78999999986432 122456788999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCC
Q 003158 587 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 666 (843)
Q Consensus 587 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~ 666 (843)
||+++|+|.+++... ..+++..++.++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 81 E~~~gg~L~~~l~~~--~~~~~~~~~~~~~ql~~aL~~LH~~g---ivHrDlkp~NIll~~~~~~kl~DfGla~~~~~~~ 155 (377)
T cd05629 81 EFLPGGDLMTMLIKY--DTFSEDVTRFYMAECVLAIEAVHKLG---FIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQH 155 (377)
T ss_pred eCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHEEECCCCCEEEeeccccccccccc
Confidence 999999999999654 35788889999999999999999999 9999999999999999999999999996432110
Q ss_pred CC----------Cccc------------------------------ceeeeeecccCCccCchhcccCCCCchhhhHHHH
Q 003158 667 IE----------GIVP------------------------------AHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLG 706 (843)
Q Consensus 667 ~~----------~~~~------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G 706 (843)
.. .... ........||+.|+|||++.+..++.++||||||
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG 235 (377)
T cd05629 156 DSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLG 235 (377)
T ss_pred ccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEecc
Confidence 00 0000 0000124699999999999999999999999999
Q ss_pred HHHHHHHhCCCCCCCCc
Q 003158 707 VVFLELLTGMQPISHGK 723 (843)
Q Consensus 707 ~~l~elltg~~pf~~~~ 723 (843)
|++|||++|+.||....
T Consensus 236 vil~elltG~~Pf~~~~ 252 (377)
T cd05629 236 AIMFECLIGWPPFCSEN 252 (377)
T ss_pred hhhhhhhcCCCCCCCCC
Confidence 99999999999997543
No 112
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00 E-value=2e-38 Score=346.06 Aligned_cols=241 Identities=20% Similarity=0.332 Sum_probs=192.7
Q ss_pred CCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCCh---hhHHHHHHHHHHHHhc-cCCcccceeeeeecCCcEEEEE
Q 003158 512 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQMLVY 586 (843)
Q Consensus 512 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~lV~ 586 (843)
+|++.+.||+|+||+||+|... +++.||+|++..... ...+.+..|..++..+ +|++|+++++++.+.+..++||
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVM 80 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEE
Confidence 4778899999999999999965 578999999875322 2234567788888777 5899999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCC
Q 003158 587 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 666 (843)
Q Consensus 587 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~ 666 (843)
||+++|+|.+++.... .+++..++.++.|++.||+|||+++ |+||||||+|||+++++.+||+|||+++......
T Consensus 81 E~~~~g~L~~~~~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~~ 155 (323)
T cd05616 81 EYVNGGDLMYQIQQVG--RFKEPHAVFYAAEIAIGLFFLHSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKENMWDG 155 (323)
T ss_pred cCCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---EEecCCCHHHeEECCCCcEEEccCCCceecCCCC
Confidence 9999999999986543 4788999999999999999999999 9999999999999999999999999987533211
Q ss_pred CCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhccCCC
Q 003158 667 IEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNM 746 (843)
Q Consensus 667 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 746 (843)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||...... ..... +.. ..
T Consensus 156 -------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~-~~~~~---------i~~-~~ 217 (323)
T cd05616 156 -------VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDED-ELFQS---------IME-HN 217 (323)
T ss_pred -------CccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHH-HHHHH---------HHh-CC
Confidence 1123456899999999999999999999999999999999999999764421 11111 111 11
Q ss_pred CCCCHHHHHHHHHHHHHhcccCCCCCCCH
Q 003158 747 GSYPSECVEKFIKLALKCCQDETDARPSM 775 (843)
Q Consensus 747 ~~~~~~~~~~l~~l~~~c~~~~p~~RPs~ 775 (843)
..+|...+.++.+++.+|++.+|.+|++.
T Consensus 218 ~~~p~~~s~~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05616 218 VAYPKSMSKEAVAICKGLMTKHPGKRLGC 246 (323)
T ss_pred CCCCCcCCHHHHHHHHHHcccCHHhcCCC
Confidence 23344556677778888888888888764
No 113
>PHA03209 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=6.6e-38 Score=346.46 Aligned_cols=289 Identities=19% Similarity=0.289 Sum_probs=203.2
Q ss_pred HHHcCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCChhhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEE
Q 003158 508 LATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 586 (843)
Q Consensus 508 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~ 586 (843)
....+|++.+.||+|+||.||+|... +++.||+|+.... ....|+.++++++|+||+++++++......++||
T Consensus 63 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~------~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 136 (357)
T PHA03209 63 VASLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG------TTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVL 136 (357)
T ss_pred hhhcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc------ccHHHHHHHHhCCCCCCcChhheEEeCCeeEEEE
Confidence 44568999999999999999999975 5789999975432 2356899999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCC
Q 003158 587 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 666 (843)
Q Consensus 587 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~ 666 (843)
||+ .++|.+++... ...+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 137 e~~-~~~l~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~- 210 (357)
T PHA03209 137 PHY-SSDLYTYLTKR-SRPLPIDQALIIEKQILEGLRYLHAQR---IIHRDVKTENIFINDVDQVCIGDLGAAQFPVVA- 210 (357)
T ss_pred Ecc-CCcHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEEecCccccccccC-
Confidence 999 56898888653 346899999999999999999999999 999999999999999999999999999753211
Q ss_pred CCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCcchH-HHHHHHhhcccchhhcc--
Q 003158 667 IEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIV-REVNIAYQSSMMFSVID-- 743 (843)
Q Consensus 667 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~-~~~~~~~~~~~~~~~~~-- 743 (843)
.......||+.|+|||++.+..++.++|||||||++|||+++..++....... ...... ....+..++.
T Consensus 211 -------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~f~~~~~~~~~~~~~-~~~~l~~~~~~~ 282 (357)
T PHA03209 211 -------PAFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTIFEDPPSTPEEYVKS-CHSHLLKIISTL 282 (357)
T ss_pred -------cccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCccccCCCCcHHHHHHH-HHHHHHHHHHHh
Confidence 11233568999999999999999999999999999999999666654322111 000000 0000001100
Q ss_pred -CCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCCCCccCCCCCc
Q 003158 744 -GNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPY 822 (843)
Q Consensus 744 -~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~sa~e~L~Hp~ 822 (843)
.....++.+....+ ....+......|..... ...++. ........+||.+||++||++||||+|+|+|||
T Consensus 283 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~-~~~~~~-----~~~~~~~~~li~~mL~~dP~~Rpta~e~l~hp~ 353 (357)
T PHA03209 283 KVHPEEFPRDPGSRL---VRGFIEYASLERQPYTR-YPCFQR-----VNLPIDGEFLVHKMLTFDAAMRPSAEEILNYPM 353 (357)
T ss_pred ccChhhcCCCCccHH---HHHHHhhcccCCCcccc-cHHHhc-----cCCCchHHHHHHHHHcCCcccCcCHHHHhcCch
Confidence 00001110000000 11111111111111100 000110 122344567999999999999999999999999
Q ss_pred ccC
Q 003158 823 VSS 825 (843)
Q Consensus 823 f~~ 825 (843)
|+.
T Consensus 354 f~~ 356 (357)
T PHA03209 354 FAQ 356 (357)
T ss_pred hcc
Confidence 975
No 114
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=4.3e-38 Score=349.41 Aligned_cols=290 Identities=21% Similarity=0.298 Sum_probs=212.7
Q ss_pred HHcCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCC--hhhHHHHHHHHHHHHhccCCcccceeeeeecC------
Q 003158 509 ATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE------ 579 (843)
Q Consensus 509 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~------ 579 (843)
..++|++.+.||+|+||.||+|... .++.||||++.... ....+.+.+|+.+++.++||||+++++++...
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~ 101 (364)
T cd07875 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF 101 (364)
T ss_pred hhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeeccccccccc
Confidence 3578999999999999999999964 68899999987532 23346788999999999999999999987543
Q ss_pred CcEEEEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeecccc
Q 003158 580 GEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLS 659 (843)
Q Consensus 580 ~~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla 659 (843)
...++||||++ ++|.+++.. .+++..+..++.|+++||+|||+++ |+||||||+||+++.++.+||+|||++
T Consensus 102 ~~~~lv~e~~~-~~l~~~~~~----~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kL~DfG~a 173 (364)
T cd07875 102 QDVYIVMELMD-ANLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLA 173 (364)
T ss_pred CeEEEEEeCCC-CCHHHHHHh----cCCHHHHHHHHHHHHHHHHHHhhCC---eecCCCCHHHEEECCCCcEEEEeCCCc
Confidence 35799999996 578777743 3778888999999999999999999 999999999999999999999999999
Q ss_pred ccCCCCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccch
Q 003158 660 RLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMF 739 (843)
Q Consensus 660 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~ 739 (843)
+..... .......||..|+|||++.+..++.++|||||||++|||++|+.||........ ....
T Consensus 174 ~~~~~~--------~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~-~~~~------- 237 (364)
T cd07875 174 RTAGTS--------FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQ-WNKV------- 237 (364)
T ss_pred cccCCC--------CcccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHH-HHHH-------
Confidence 765321 112334689999999999999999999999999999999999999976553322 2111
Q ss_pred hhccCCCCCCCHHHHHHHHHHHHHhcccCCCCC-CCHHHHHHHHH-Hh-hhhCCCCCCCCCccccCCCCCCCCCCCCCcc
Q 003158 740 SVIDGNMGSYPSECVEKFIKLALKCCQDETDAR-PSMSEVMRELE-SI-WNMMPESDTKTPEFINSEHTSKEETPPSSSS 816 (843)
Q Consensus 740 ~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~R-Ps~~~vl~~L~-~~-~~~~~~~~~~~~dll~~~L~~dp~~R~sa~e 816 (843)
+. ..+....+....+...+.......|... ..+.++..... .. ..........+.|||.+||+.||.+|+|++|
T Consensus 238 --~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e 314 (364)
T cd07875 238 --IE-QLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDE 314 (364)
T ss_pred --HH-hcCCCCHHHHHhhhHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHH
Confidence 11 1222233444444433333333222221 11221111000 00 0001112334568999999999999999999
Q ss_pred CCCCCcccC
Q 003158 817 MLKHPYVSS 825 (843)
Q Consensus 817 ~L~Hp~f~~ 825 (843)
+|+||||..
T Consensus 315 ~L~hp~~~~ 323 (364)
T cd07875 315 ALQHPYINV 323 (364)
T ss_pred HhcCccccc
Confidence 999999964
No 115
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=100.00 E-value=7.1e-38 Score=331.45 Aligned_cols=255 Identities=31% Similarity=0.481 Sum_probs=210.4
Q ss_pred cCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCChhhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEEecC
Q 003158 511 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFM 589 (843)
Q Consensus 511 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e~~ 589 (843)
.+|+..+.||+|+||.||+|.+. +++.||+|.+... ....+++.+|+++++.++|+||+++++++..++..++||||+
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (263)
T cd05052 6 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFM 84 (263)
T ss_pred HHeEEeeecCCcccceEEEEEEecCCceEEEEEecCC-chHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEEeC
Confidence 45778899999999999999965 5889999998753 333567899999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCCCC
Q 003158 590 SNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEG 669 (843)
Q Consensus 590 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~ 669 (843)
++++|.+++.......+++..++.++.|+++||+|||+.+ ++||||||+||++++++.+||+|||++........
T Consensus 85 ~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~---i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~~-- 159 (263)
T cd05052 85 TYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY-- 159 (263)
T ss_pred CCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhCC---EeecccCcceEEEcCCCcEEeCCCcccccccccee--
Confidence 9999999997766667899999999999999999999998 99999999999999999999999999986543211
Q ss_pred cccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHh-CCCCCCCCcchHHHHHHHhhcccchhhccCCCCC
Q 003158 670 IVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGS 748 (843)
Q Consensus 670 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 748 (843)
.......++..|+|||.+.+..++.++|||||||++|||++ |..||..... .+.... +.......
T Consensus 160 ----~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~-~~~~~~---------~~~~~~~~ 225 (263)
T cd05052 160 ----TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL-SQVYEL---------LEKGYRME 225 (263)
T ss_pred ----eccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCH-HHHHHH---------HHCCCCCC
Confidence 01111234568999999999999999999999999999998 8888865432 221111 11111223
Q ss_pred CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHh
Q 003158 749 YPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 785 (843)
Q Consensus 749 ~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~ 785 (843)
.+..++..+.+++.+||+.+|++||++.++.+.|+.+
T Consensus 226 ~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~l~~~ 262 (263)
T cd05052 226 RPEGCPPKVYELMRACWQWNPSDRPSFAEIHQAFETM 262 (263)
T ss_pred CCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHhh
Confidence 4556678899999999999999999999999998865
No 116
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=100.00 E-value=1.1e-38 Score=348.36 Aligned_cols=195 Identities=29% Similarity=0.413 Sum_probs=165.5
Q ss_pred CcccccCCeeEEEEEeC-CCcEEEEEEeccCC---hhhHHHHHHHHH-HHHhccCCcccceeeeeecCCcEEEEEecCCC
Q 003158 517 TQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQ-FLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSN 591 (843)
Q Consensus 517 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~-~l~~l~h~nIv~l~~~~~~~~~~~lV~e~~~~ 591 (843)
+.||+|+||+||+|... +|+.||+|++.... ....+.+..|.. +++.++||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNG 80 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCC
Confidence 46899999999999964 68999999987532 122345556655 56779999999999999999999999999999
Q ss_pred CCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCCCCcc
Q 003158 592 GTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIV 671 (843)
Q Consensus 592 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~ 671 (843)
|+|.+++... ..+++..+..++.||+.||+|||+.+ |+||||||+|||+++++.+||+|||+++.....
T Consensus 81 ~~L~~~l~~~--~~~~~~~~~~~~~qi~~al~~lH~~g---ivH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~------ 149 (325)
T cd05604 81 GELFFHLQRE--RSFPEPRARFYAAEIASALGYLHSIN---IVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQ------ 149 (325)
T ss_pred CCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCHHHeEECCCCCEEEeecCCcccCCCC------
Confidence 9999988654 35889999999999999999999999 999999999999999999999999998753211
Q ss_pred cceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCc
Q 003158 672 PAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 723 (843)
Q Consensus 672 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~ 723 (843)
........||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 150 -~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~ 200 (325)
T cd05604 150 -SDTTTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRD 200 (325)
T ss_pred -CCCcccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCC
Confidence 112234568999999999999999999999999999999999999997543
No 117
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=4.3e-37 Score=321.10 Aligned_cols=268 Identities=27% Similarity=0.388 Sum_probs=204.5
Q ss_pred cCCCCCCcccccCCeeEEEEEeCCCcEEEEEEeccCChhhHHHHHHHHHHHHhc--cCCcccceeeeeecCC----cEEE
Q 003158 511 NNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRL--HHRNLVSLVGYCDEEG----EQML 584 (843)
Q Consensus 511 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l--~h~nIv~l~~~~~~~~----~~~l 584 (843)
...+..+.||+|.||.||||.+. ++.||||++.. +..+.|..|-++++.. +|+||++|+++-.... +++|
T Consensus 210 ~pl~l~eli~~Grfg~V~KaqL~-~~~VAVKifp~---~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywL 285 (534)
T KOG3653|consen 210 DPLQLLELIGRGRFGCVWKAQLD-NRLVAVKIFPE---QEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYWL 285 (534)
T ss_pred CchhhHHHhhcCccceeehhhcc-CceeEEEecCH---HHHHHHHhHHHHHhccCccchhHHHhhchhccCCccccceeE
Confidence 34455678999999999999985 49999999964 4456788888887764 8999999999875544 8999
Q ss_pred EEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCC------CCCEEeccCCCCcEEEcCCCcEEEeeccc
Q 003158 585 VYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEA------DPPVFHRDIKASNILLDHKFTAKVADFGL 658 (843)
Q Consensus 585 V~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~------~~~iiH~Dlkp~NILl~~~~~~kl~DfGl 658 (843)
|+||.+.|+|.+||..+ .++|....+|+..+++||+|||+.. +|+|+|||||++||||.+|+++.|+|||+
T Consensus 286 Vt~fh~kGsL~dyL~~n---tisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGL 362 (534)
T KOG3653|consen 286 VTEFHPKGSLCDYLKAN---TISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFGL 362 (534)
T ss_pred EeeeccCCcHHHHHHhc---cccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeeccce
Confidence 99999999999999654 5899999999999999999999753 67899999999999999999999999999
Q ss_pred cccCCCCCCCCcccceeeeeecccCCccCchhcccCC-CC-----chhhhHHHHHHHHHHHhCCCCCCCCc--c----hH
Q 003158 659 SRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHK-LT-----DKSDVYSLGVVFLELLTGMQPISHGK--N----IV 726 (843)
Q Consensus 659 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~-----~~sDvwS~G~~l~elltg~~pf~~~~--~----~~ 726 (843)
|..+...... ......+||.+|||||++.+.. +. .+.||||+|.+||||+++..-+..+. + ..
T Consensus 363 Al~~~p~~~~-----~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe 437 (534)
T KOG3653|consen 363 ALRLEPGKPQ-----GDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFE 437 (534)
T ss_pred eEEecCCCCC-----cchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchh
Confidence 9988754322 2233478999999999998742 22 36899999999999999876553211 1 00
Q ss_pred HHHHHHhhcccchh--hccCCCCCCCHHH-----HHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCC
Q 003158 727 REVNIAYQSSMMFS--VIDGNMGSYPSEC-----VEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMP 790 (843)
Q Consensus 727 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~-----~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~ 790 (843)
..+-..-..+.+.+ +.+..++.+|+.+ ..-+.+.+..||+.|++.|-|+.=+.+++..+....+
T Consensus 438 ~evG~hPt~e~mq~~VV~kK~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l~~~~~ 508 (534)
T KOG3653|consen 438 AEVGNHPTLEEMQELVVRKKQRPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAGCVEERMAELMMLWE 508 (534)
T ss_pred HHhcCCCCHHHHHHHHHhhccCCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhHHHHHHHHHHhccCC
Confidence 01100000011111 2233445555544 3567889999999999999999998888887755444
No 118
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=100.00 E-value=6.5e-39 Score=357.62 Aligned_cols=208 Identities=23% Similarity=0.317 Sum_probs=173.9
Q ss_pred cCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCCh---hhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEE
Q 003158 511 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 586 (843)
Q Consensus 511 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~ 586 (843)
++|++.+.||+|+||.||+|+.. +++.||||++..... ...+.+.+|+++++.++|+||+++++.+.+++..++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (376)
T cd05598 1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVM 80 (376)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEE
Confidence 36889999999999999999964 689999999864322 22456789999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCC
Q 003158 587 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 666 (843)
Q Consensus 587 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~ 666 (843)
||+++|+|.+++.... .+++..++.++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+|..+....
T Consensus 81 E~~~~g~L~~~i~~~~--~~~~~~~~~~~~qi~~al~~lH~~~---ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~~ 155 (376)
T cd05598 81 DYIPGGDMMSLLIRLG--IFEEDLARFYIAELTCAIESVHKMG---FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTH 155 (376)
T ss_pred eCCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCCHHHEEECCCCCEEEEeCCCCccccccc
Confidence 9999999999996643 4788888899999999999999999 9999999999999999999999999985332100
Q ss_pred CCC------------------------------------cccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHH
Q 003158 667 IEG------------------------------------IVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFL 710 (843)
Q Consensus 667 ~~~------------------------------------~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~ 710 (843)
... ...........||+.|+|||++.+..++.++|||||||++|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvily 235 (376)
T cd05598 156 DSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILY 235 (376)
T ss_pred cccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccceee
Confidence 000 00000112346999999999999999999999999999999
Q ss_pred HHHhCCCCCCCCc
Q 003158 711 ELLTGMQPISHGK 723 (843)
Q Consensus 711 elltg~~pf~~~~ 723 (843)
||++|+.||....
T Consensus 236 ell~G~~Pf~~~~ 248 (376)
T cd05598 236 EMLVGQPPFLADT 248 (376)
T ss_pred ehhhCCCCCCCCC
Confidence 9999999997544
No 119
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=100.00 E-value=2.2e-38 Score=345.62 Aligned_cols=241 Identities=21% Similarity=0.337 Sum_probs=189.0
Q ss_pred CCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCCh---hhHHHHHHHHHHHHhcc-CCcccceeeeeecCCcEEEEE
Q 003158 512 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLH-HRNLVSLVGYCDEEGEQMLVY 586 (843)
Q Consensus 512 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~-h~nIv~l~~~~~~~~~~~lV~ 586 (843)
+|+..+.||+|+||+||+|... +++.||+|++..... ...+.+..|.++++.+. |++|+++++++.+.+..++||
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVM 80 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEE
Confidence 3677889999999999999964 689999999875321 22356778888888885 578889999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCC
Q 003158 587 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 666 (843)
Q Consensus 587 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~ 666 (843)
||+++|+|.+++.... .+++..++.++.|++.||+|||+++ |+||||||+|||+++++.+||+|||+++......
T Consensus 81 Ey~~~g~L~~~i~~~~--~l~~~~~~~i~~qi~~al~~lH~~~---ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~~ 155 (323)
T cd05615 81 EYVNGGDLMYHIQQVG--KFKEPQAVFYAAEISVGLFFLHRRG---IIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVDG 155 (323)
T ss_pred cCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHeEECCCCCEEEeccccccccCCCC
Confidence 9999999999986543 4889999999999999999999999 9999999999999999999999999987532211
Q ss_pred CCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhccCCC
Q 003158 667 IEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNM 746 (843)
Q Consensus 667 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 746 (843)
.......||+.|+|||++.+..++.++||||+||++|||++|+.||..... ...... +.. ..
T Consensus 156 -------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~-~~~~~~---------i~~-~~ 217 (323)
T cd05615 156 -------VTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDE-DELFQS---------IME-HN 217 (323)
T ss_pred -------ccccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCH-HHHHHH---------HHh-CC
Confidence 112334689999999999999999999999999999999999999975432 111111 111 11
Q ss_pred CCCCHHHHHHHHHHHHHhcccCCCCCCCH
Q 003158 747 GSYPSECVEKFIKLALKCCQDETDARPSM 775 (843)
Q Consensus 747 ~~~~~~~~~~l~~l~~~c~~~~p~~RPs~ 775 (843)
..+|...+.++.+++.+|++++|.+|++.
T Consensus 218 ~~~p~~~~~~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05615 218 VSYPKSLSKEAVSICKGLMTKHPSKRLGC 246 (323)
T ss_pred CCCCccCCHHHHHHHHHHcccCHhhCCCC
Confidence 12334445556666677777777777653
No 120
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00 E-value=1.1e-38 Score=349.39 Aligned_cols=203 Identities=26% Similarity=0.349 Sum_probs=175.1
Q ss_pred cCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCCh---hhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEE
Q 003158 511 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 586 (843)
Q Consensus 511 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~ 586 (843)
++|++.+.||+|+||+||+|... +++.||+|+++.... ...+.+.+|+.+++.++|+||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVM 80 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEE
Confidence 46888999999999999999964 689999999875322 23456889999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCC
Q 003158 587 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 666 (843)
Q Consensus 587 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~ 666 (843)
||+++|+|.+++... ...+++..+..++.|+++||.|||+.+ |+||||||+||+++.++.+||+|||++.......
T Consensus 81 e~~~~~~L~~~l~~~-~~~l~~~~~~~~~~qi~~aL~~lH~~~---i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~ 156 (330)
T cd05601 81 EYQPGGDLLSLLNRY-EDQFDEDMAQFYLAELVLAIHSVHQMG---YVHRDIKPENVLIDRTGHIKLADFGSAARLTANK 156 (330)
T ss_pred CCCCCCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEcccCchHheEECCCCCEEeccCCCCeECCCCC
Confidence 999999999999764 235889999999999999999999999 9999999999999999999999999998654321
Q ss_pred CCCcccceeeeeecccCCccCchhcc------cCCCCchhhhHHHHHHHHHHHhCCCCCCCCc
Q 003158 667 IEGIVPAHVSTVVKGTPGYLDPEYFL------THKLTDKSDVYSLGVVFLELLTGMQPISHGK 723 (843)
Q Consensus 667 ~~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~sDvwS~G~~l~elltg~~pf~~~~ 723 (843)
........||+.|+|||++. ...++.++|||||||++|||++|+.||....
T Consensus 157 ------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~ 213 (330)
T cd05601 157 ------MVNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGT 213 (330)
T ss_pred ------ceeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCC
Confidence 11223346899999999987 4567889999999999999999999997543
No 121
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=100.00 E-value=4e-38 Score=349.58 Aligned_cols=209 Identities=22% Similarity=0.302 Sum_probs=177.3
Q ss_pred HHHHHHHHcCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCC---hhhHHHHHHHHHHHHhccCCcccceeeeeec
Q 003158 503 YGEMALATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDE 578 (843)
Q Consensus 503 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~ 578 (843)
..+.....++|++.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|+.+++.++||||+++++++.+
T Consensus 35 ~~~~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~ 114 (371)
T cd05622 35 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQD 114 (371)
T ss_pred HhhcCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEc
Confidence 3445556789999999999999999999965 68899999986422 1223457889999999999999999999999
Q ss_pred CCcEEEEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccc
Q 003158 579 EGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGL 658 (843)
Q Consensus 579 ~~~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGl 658 (843)
++..++||||+++|+|.+++... .+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+
T Consensus 115 ~~~~~lv~Ey~~gg~L~~~~~~~---~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDLkp~NIll~~~~~ikL~DfG~ 188 (371)
T cd05622 115 DRYLYMVMEYMPGGDLVNLMSNY---DVPEKWARFYTAEVVLALDAIHSMG---FIHRDVKPDNMLLDKSGHLKLADFGT 188 (371)
T ss_pred CCEEEEEEcCCCCCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHCC---EEeCCCCHHHEEECCCCCEEEEeCCc
Confidence 99999999999999999998653 3778888899999999999999999 99999999999999999999999999
Q ss_pred cccCCCCCCCCcccceeeeeecccCCccCchhcccCC----CCchhhhHHHHHHHHHHHhCCCCCCCCc
Q 003158 659 SRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHK----LTDKSDVYSLGVVFLELLTGMQPISHGK 723 (843)
Q Consensus 659 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~sDvwS~G~~l~elltg~~pf~~~~ 723 (843)
++...... ........||+.|+|||++.+.. ++.++|||||||++|||++|+.||....
T Consensus 189 a~~~~~~~------~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~ 251 (371)
T cd05622 189 CMKMNKEG------MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADS 251 (371)
T ss_pred eeEcCcCC------cccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCC
Confidence 98654221 11123456999999999997543 7889999999999999999999997544
No 122
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-38 Score=357.74 Aligned_cols=265 Identities=23% Similarity=0.349 Sum_probs=217.6
Q ss_pred HHcCCCCCCcccccCCeeEEEEEeCCC-cEEEEEEeccCChhhHHHHHHHHHHHHhcc-CCcccceeee-ee---c---C
Q 003158 509 ATNNFNSSTQIGQGGYGKVYKGILPDG-TVVAVKRAQEGSLQGEKEFLTEIQFLSRLH-HRNLVSLVGY-CD---E---E 579 (843)
Q Consensus 509 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~-~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~nIv~l~~~-~~---~---~ 579 (843)
...++++.+.|.+|||+.||.|....+ ..||+|++........+.+.+||++|+.|+ |+|||.+++. .. . .
T Consensus 35 g~~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~ 114 (738)
T KOG1989|consen 35 GSHRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGV 114 (738)
T ss_pred CCEEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCce
Confidence 345667789999999999999997765 999999998777777888999999999997 9999999993 21 1 2
Q ss_pred CcEEEEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeecccc
Q 003158 580 GEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLS 659 (843)
Q Consensus 580 ~~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla 659 (843)
-+.+|.||||+||.|-|++..+....|.+.++++|+.|+++|+++||.. +|||||||||-+|||++.++..||||||.|
T Consensus 115 ~EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~-~pPiIHRDLKiENvLls~~g~~KLCDFGSa 193 (738)
T KOG1989|consen 115 WEVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYL-KPPIIHRDLKIENVLLSADGNYKLCDFGSA 193 (738)
T ss_pred eEEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcC-CCccchhhhhhhheEEcCCCCEEeCccccc
Confidence 3678999999999999999876666699999999999999999999997 488999999999999999999999999999
Q ss_pred ccCCCCCC--CCcccceeeeeecccCCccCchhcc---cCCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhh
Q 003158 660 RLAPVPDI--EGIVPAHVSTVVKGTPGYLDPEYFL---THKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQ 734 (843)
Q Consensus 660 ~~~~~~~~--~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~ 734 (843)
........ .+...-...-....|+.|+|||.+. +..+++|+|||||||+||-|+....||+....
T Consensus 194 tt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~---------- 263 (738)
T KOG1989|consen 194 TTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGK---------- 263 (738)
T ss_pred ccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcc----------
Confidence 75332110 0000000111234789999999984 67899999999999999999999999986532
Q ss_pred cccchhhccCCCCCC-CHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhh
Q 003158 735 SSMMFSVIDGNMGSY-PSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNM 788 (843)
Q Consensus 735 ~~~~~~~~~~~~~~~-~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~ 788 (843)
..++.+...-+ .+.++..+..+|..|++.+|++||++-+|+..+..+.+.
T Consensus 264 ----laIlng~Y~~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~~~ 314 (738)
T KOG1989|consen 264 ----LAILNGNYSFPPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFELANK 314 (738)
T ss_pred ----eeEEeccccCCCCccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHHhcC
Confidence 24455544322 368999999999999999999999999999999888664
No 123
>PHA03207 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=2.6e-38 Score=354.16 Aligned_cols=288 Identities=20% Similarity=0.233 Sum_probs=209.1
Q ss_pred HcCCCCCCcccccCCeeEEEEEeC---CCcEEEEEEeccCChhhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEE
Q 003158 510 TNNFNSSTQIGQGGYGKVYKGILP---DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 586 (843)
Q Consensus 510 ~~~~~~~~~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~ 586 (843)
..+|.+.+.||+|+||.||+|... .++.||+|.+... +...+|+++++.++||||+++++++......++||
T Consensus 91 ~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~-----~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 165 (392)
T PHA03207 91 RMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG-----KTPGREIDILKTISHRAIINLIHAYRWKSTVCMVM 165 (392)
T ss_pred cCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc-----ccHHHHHHHHHhcCCCCccceeeeEeeCCEEEEEe
Confidence 457999999999999999999753 3678999988643 24567999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCC
Q 003158 587 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 666 (843)
Q Consensus 587 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~ 666 (843)
|++. ++|.+++.. ...+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++......
T Consensus 166 e~~~-~~l~~~l~~--~~~l~~~~~~~i~~ql~~aL~~LH~~g---ivHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~~ 239 (392)
T PHA03207 166 PKYK-CDLFTYVDR--SGPLPLEQAITIQRRLLEALAYLHGRG---IIHRDVKTENIFLDEPENAVLGDFGAACKLDAHP 239 (392)
T ss_pred hhcC-CCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEEcCCCCEEEccCccccccCccc
Confidence 9995 789998843 346889999999999999999999999 9999999999999999999999999997654322
Q ss_pred CCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCcch--HHHHHHHhhcccchhhccC
Q 003158 667 IEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNI--VREVNIAYQSSMMFSVIDG 744 (843)
Q Consensus 667 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~--~~~~~~~~~~~~~~~~~~~ 744 (843)
. ........||+.|+|||++.+..++.++|||||||++|||++|+.||...... ...+..... .+..
T Consensus 240 ~-----~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~------~~~~ 308 (392)
T PHA03207 240 D-----TPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIR------CMQV 308 (392)
T ss_pred c-----cccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHH------Hhcc
Confidence 1 11123456999999999999999999999999999999999999999754321 111111110 0000
Q ss_pred CCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCCCCccCCCCCccc
Q 003158 745 NMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVS 824 (843)
Q Consensus 745 ~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~sa~e~L~Hp~f~ 824 (843)
....++......+.+-.. +.....||...- -..+.. ...+..+.+||.+||++||++|+||.|+|.||||.
T Consensus 309 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~-~~~~~~-----~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~p~f~ 379 (392)
T PHA03207 309 HPLEFPQNGSTNLCKHFK---QYAIVLRPPYTI-PPVIRK-----YGMHMDVEYLIAKMLTFDQEFRPSAQDILSLPLFT 379 (392)
T ss_pred CccccCCccchhHHHHHH---hhcccccCCccc-cchhhc-----cCcchhHHHHHHHHhccChhhCCCHHHHhhCchhh
Confidence 011111111111111111 112223332210 000000 01123455789999999999999999999999997
Q ss_pred CCCC
Q 003158 825 SDVS 828 (843)
Q Consensus 825 ~~~~ 828 (843)
....
T Consensus 380 ~~~~ 383 (392)
T PHA03207 380 KEPI 383 (392)
T ss_pred ccch
Confidence 7544
No 124
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=100.00 E-value=2.3e-38 Score=344.67 Aligned_cols=195 Identities=25% Similarity=0.402 Sum_probs=167.3
Q ss_pred CcccccCCeeEEEEEeC-CCcEEEEEEeccCCh---hhHHHHHHHHHHHHhc-cCCcccceeeeeecCCcEEEEEecCCC
Q 003158 517 TQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQMLVYEFMSN 591 (843)
Q Consensus 517 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~lV~e~~~~ 591 (843)
+.||+|+||+||+|... +++.||+|++..... .....+..|.++++.+ +||||+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG 80 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999965 588999999875321 2234567888988887 699999999999999999999999999
Q ss_pred CCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCCCCcc
Q 003158 592 GTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIV 671 (843)
Q Consensus 592 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~ 671 (843)
|+|.+++.... .+++..+..++.|++.||.|||+.+ |+||||||+||++++++.+||+|||+++......
T Consensus 81 ~~L~~~~~~~~--~l~~~~~~~~~~qi~~~l~~LH~~~---ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~----- 150 (318)
T cd05570 81 GDLMFHIQRSG--RFDEPRARFYAAEIVLGLQFLHERG---IIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGG----- 150 (318)
T ss_pred CCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhCC---eEccCCCHHHeEECCCCcEEecccCCCeecCcCC-----
Confidence 99999986543 5889999999999999999999999 9999999999999999999999999987532211
Q ss_pred cceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCc
Q 003158 672 PAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 723 (843)
Q Consensus 672 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~ 723 (843)
.......|++.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 151 --~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~ 200 (318)
T cd05570 151 --VTTSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDD 200 (318)
T ss_pred --CcccceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCC
Confidence 11233468999999999999999999999999999999999999996543
No 125
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00 E-value=7.4e-39 Score=348.74 Aligned_cols=238 Identities=24% Similarity=0.311 Sum_probs=190.2
Q ss_pred CcccccCCeeEEEEEe----CCCcEEEEEEeccCCh--hhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEEecCC
Q 003158 517 TQIGQGGYGKVYKGIL----PDGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMS 590 (843)
Q Consensus 517 ~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e~~~ 590 (843)
+.||+|+||.||++.. .+|+.||+|++..... .....+..|++++++++||||+++++++.+.+..++||||++
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 81 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLR 81 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCC
Confidence 5799999999999874 3589999999875332 223467789999999999999999999999999999999999
Q ss_pred CCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCCCCc
Q 003158 591 NGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGI 670 (843)
Q Consensus 591 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~ 670 (843)
+|+|.+++... ..+++..++.++.||++||+|||+.+ |+||||||+||++++++.+||+|||+++......
T Consensus 82 ~~~L~~~l~~~--~~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~---- 152 (318)
T cd05582 82 GGDLFTRLSKE--VMFTEEDVKFYLAELALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHE---- 152 (318)
T ss_pred CCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCCHHHeEECCCCcEEEeeccCCcccCCCC----
Confidence 99999999654 35889999999999999999999999 9999999999999999999999999987643221
Q ss_pred ccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhccCCCCCCC
Q 003158 671 VPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYP 750 (843)
Q Consensus 671 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 750 (843)
.......|++.|+|||.+.+..++.++|||||||++|||++|+.||...... ..... +. ......|
T Consensus 153 ---~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~-~~~~~---------i~-~~~~~~p 218 (318)
T cd05582 153 ---KKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRK-ETMTM---------IL-KAKLGMP 218 (318)
T ss_pred ---CceecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHH-HHHHH---------HH-cCCCCCC
Confidence 1223456899999999999988999999999999999999999999754321 11111 11 1111234
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCHHH
Q 003158 751 SECVEKFIKLALKCCQDETDARPSMSE 777 (843)
Q Consensus 751 ~~~~~~l~~l~~~c~~~~p~~RPs~~~ 777 (843)
...+..+.+++..||+.+|.+||++.+
T Consensus 219 ~~~~~~~~~li~~~l~~~P~~R~~a~~ 245 (318)
T cd05582 219 QFLSPEAQSLLRALFKRNPANRLGAGP 245 (318)
T ss_pred CCCCHHHHHHHHHHhhcCHhHcCCCCC
Confidence 444556667777777777777777665
No 126
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=100.00 E-value=2.1e-38 Score=340.24 Aligned_cols=277 Identities=25% Similarity=0.380 Sum_probs=201.4
Q ss_pred CCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCChh--hHHHHHHHHHHHHhc---cCCcccceeeeeec-----CC
Q 003158 512 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ--GEKEFLTEIQFLSRL---HHRNLVSLVGYCDE-----EG 580 (843)
Q Consensus 512 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l---~h~nIv~l~~~~~~-----~~ 580 (843)
+|++.+.||+|+||+||+|... +++.||+|.+...... ....+.+|+++++.+ +||||+++++++.. ..
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~ 80 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRET 80 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCc
Confidence 5788899999999999999965 6899999988753221 234556777777665 69999999998854 34
Q ss_pred cEEEEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccc
Q 003158 581 EQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSR 660 (843)
Q Consensus 581 ~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~ 660 (843)
..++||||++ ++|.+++.......+++..++.++.|++.||.|||+.+ |+||||||+||++++++.+||+|||+++
T Consensus 81 ~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~dikp~Nili~~~~~~kl~dfg~~~ 156 (288)
T cd07863 81 KVTLVFEHVD-QDLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGQVKLADFGLAR 156 (288)
T ss_pred eEEEEEcccc-cCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCCEEECccCccc
Confidence 5799999996 59999987765556899999999999999999999999 9999999999999999999999999998
Q ss_pred cCCCCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchh
Q 003158 661 LAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFS 740 (843)
Q Consensus 661 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~ 740 (843)
...... ......|+..|+|||++.+..++.++||||+||++|||++|+.||....... .......
T Consensus 157 ~~~~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~-~~~~~~~------ 221 (288)
T cd07863 157 IYSCQM--------ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEAD-QLGKIFD------ 221 (288)
T ss_pred cccCcc--------cCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHH-HHHHHHH------
Confidence 654221 1123457899999999999999999999999999999999999986543321 1111110
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCCCCccCCCC
Q 003158 741 VIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKH 820 (843)
Q Consensus 741 ~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~sa~e~L~H 820 (843)
.... .....++.. ..+..... .+..... +....+..+....|++.+||+.||++|+|++|++.|
T Consensus 222 ~~~~---~~~~~~~~~-~~~~~~~~--~~~~~~~----------~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~h 285 (288)
T cd07863 222 LIGL---PPEDDWPRD-VTLPRGAF--SPRGPRP----------VQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQH 285 (288)
T ss_pred HhCC---CChhhCccc-cccccccc--CCCCCCc----------hHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 0000 000000000 00000000 0000001 111223334455689999999999999999999999
Q ss_pred Ccc
Q 003158 821 PYV 823 (843)
Q Consensus 821 p~f 823 (843)
|||
T Consensus 286 p~f 288 (288)
T cd07863 286 PFF 288 (288)
T ss_pred CCC
Confidence 998
No 127
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=100.00 E-value=9.1e-38 Score=330.19 Aligned_cols=256 Identities=29% Similarity=0.490 Sum_probs=211.0
Q ss_pred HHcCCCCCCcccccCCeeEEEEEeCCCcEEEEEEeccCChhhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEEec
Q 003158 509 ATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 588 (843)
Q Consensus 509 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e~ 588 (843)
..++|++.+.||+|++|.||+|...+++.||+|.++... ...+++.+|++++++++|+||+++++++...+..++||||
T Consensus 4 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 82 (261)
T cd05068 4 DRTSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGT-MDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTEL 82 (261)
T ss_pred chhheeeEEEecccCCccEEEEEecCCeEEEEEeeCCCc-ccHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeeeec
Confidence 456788899999999999999998778899999987543 3356789999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCCC
Q 003158 589 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 668 (843)
Q Consensus 589 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 668 (843)
+++++|.+++.......+++..+..++.|++.||.|||+.+ |+||||||+||++++++.+||+|||+++.......
T Consensus 83 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~- 158 (261)
T cd05068 83 MKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQN---YIHRDLAARNVLVGENNICKVADFGLARVIKEDIY- 158 (261)
T ss_pred ccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeeccCCcceEEEcCCCCEEECCcceEEEccCCcc-
Confidence 99999999997755556899999999999999999999998 99999999999999999999999999987642211
Q ss_pred CcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHh-CCCCCCCCcchHHHHHHHhhcccchhhccCCCC
Q 003158 669 GIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGNMG 747 (843)
Q Consensus 669 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 747 (843)
........+..|+|||++.+..++.++||||||+++|||++ |+.||...... ..... +......
T Consensus 159 -----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~-~~~~~---------~~~~~~~ 223 (261)
T cd05068 159 -----EAREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNA-EVLQQ---------VDQGYRM 223 (261)
T ss_pred -----cccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHH-HHHHH---------HHcCCCC
Confidence 01111223457999999999999999999999999999999 99898654321 11111 1111112
Q ss_pred CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 003158 748 SYPSECVEKFIKLALKCCQDETDARPSMSEVMRELES 784 (843)
Q Consensus 748 ~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~ 784 (843)
..+..++..+.+++.+|++.+|.+||++.++.+.|+.
T Consensus 224 ~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~~ 260 (261)
T cd05068 224 PCPPGCPKELYDIMLDCWKEDPDDRPTFETLQWKLED 260 (261)
T ss_pred CCCCcCCHHHHHHHHHHhhcCcccCCCHHHHHHHHhc
Confidence 2344567889999999999999999999999999875
No 128
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=100.00 E-value=6.5e-38 Score=335.82 Aligned_cols=200 Identities=28% Similarity=0.411 Sum_probs=174.1
Q ss_pred CCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCChh---hHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEEec
Q 003158 513 FNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ---GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 588 (843)
Q Consensus 513 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e~ 588 (843)
|+..+.||+|+||+||+|... +++.||+|.+...... ....+.+|+++++.++|+||+++.+++..++..++||||
T Consensus 2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05632 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTI 81 (285)
T ss_pred ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEe
Confidence 667788999999999999964 6899999998754322 234578899999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCCC
Q 003158 589 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 668 (843)
Q Consensus 589 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 668 (843)
+++++|.+++.......+++..+..++.|++.||.|||+.+ |+||||||+||++++++.+||+|||++.......
T Consensus 82 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~---iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~-- 156 (285)
T cd05632 82 MNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHREN---TVYRDLKPENILLDDYGHIRISDLGLAVKIPEGE-- 156 (285)
T ss_pred ccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeecCCCHHHEEECCCCCEEEecCCcceecCCCC--
Confidence 99999999987655557999999999999999999999999 9999999999999999999999999987543211
Q ss_pred CcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCc
Q 003158 669 GIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 723 (843)
Q Consensus 669 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~ 723 (843)
......|+..|+|||++.+..++.++|+|||||++|||++|+.||....
T Consensus 157 ------~~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~ 205 (285)
T cd05632 157 ------SIRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRK 205 (285)
T ss_pred ------cccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCC
Confidence 1123468999999999999999999999999999999999999997543
No 129
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=100.00 E-value=1.2e-37 Score=332.82 Aligned_cols=256 Identities=28% Similarity=0.506 Sum_probs=209.9
Q ss_pred HcCCCCCCcccccCCeeEEEEEeCC------CcEEEEEEeccCChh-hHHHHHHHHHHHHhccCCcccceeeeeecCCcE
Q 003158 510 TNNFNSSTQIGQGGYGKVYKGILPD------GTVVAVKRAQEGSLQ-GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQ 582 (843)
Q Consensus 510 ~~~~~~~~~lg~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~ 582 (843)
.++|.+.+.||+|+||.||+|...+ ++.||||.+...... ..+.+.+|+++++.++|+||+++++++......
T Consensus 4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~ 83 (280)
T cd05049 4 RDTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGDPP 83 (280)
T ss_pred hHHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecCCCe
Confidence 3568888999999999999998632 478999998765444 457899999999999999999999999999999
Q ss_pred EEEEecCCCCCHHHHHhhcC------------CCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCc
Q 003158 583 MLVYEFMSNGTLRDQLSAKS------------KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFT 650 (843)
Q Consensus 583 ~lV~e~~~~gsL~~~l~~~~------------~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~ 650 (843)
++||||+++++|.+++...+ ...+++..+..++.|++.|+.|||+.+ ++||||||+||+++.++.
T Consensus 84 ~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~---i~h~dlkp~nili~~~~~ 160 (280)
T cd05049 84 IMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQH---FVHRDLATRNCLVGYDLV 160 (280)
T ss_pred EEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCC---eeccccccceEEEcCCCe
Confidence 99999999999999997542 235788899999999999999999998 999999999999999999
Q ss_pred EEEeeccccccCCCCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHh-CCCCCCCCcchHHHH
Q 003158 651 AKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREV 729 (843)
Q Consensus 651 ~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~ellt-g~~pf~~~~~~~~~~ 729 (843)
+||+|||+++.....+. ........+++.|+|||++.+..++.++|||||||++|||++ |..||...... +..
T Consensus 161 ~kl~d~g~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~-~~~ 234 (280)
T cd05049 161 VKIGDFGMSRDVYTTDY-----YRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNE-EVI 234 (280)
T ss_pred EEECCcccceecccCcc-----eecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHH-HHH
Confidence 99999999975432211 011123345678999999999999999999999999999999 99998754432 111
Q ss_pred HHHhhcccchhhccCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 003158 730 NIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELE 783 (843)
Q Consensus 730 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~ 783 (843)
. .+..+.....+..++..+.+++.+||+.+|++||++.++++.|+
T Consensus 235 ~---------~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~ 279 (280)
T cd05049 235 E---------CITQGRLLQRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQ 279 (280)
T ss_pred H---------HHHcCCcCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhh
Confidence 1 11122333345567788999999999999999999999998875
No 130
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=100.00 E-value=2e-37 Score=332.56 Aligned_cols=261 Identities=30% Similarity=0.491 Sum_probs=212.3
Q ss_pred HcCCCCCCcccccCCeeEEEEEeC------CCcEEEEEEeccCChhhHHHHHHHHHHHHhccCCcccceeeeeecCCcEE
Q 003158 510 TNNFNSSTQIGQGGYGKVYKGILP------DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQM 583 (843)
Q Consensus 510 ~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~ 583 (843)
.++|.+.+.||+|+||+||++... ++..+|+|.+........+.+.+|++++++++|+||+++++++...+..+
T Consensus 4 ~~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 83 (288)
T cd05093 4 RHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLI 83 (288)
T ss_pred hHHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccE
Confidence 357888999999999999999842 35679999988665555678999999999999999999999999999999
Q ss_pred EEEecCCCCCHHHHHhhcC-----------CCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEE
Q 003158 584 LVYEFMSNGTLRDQLSAKS-----------KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAK 652 (843)
Q Consensus 584 lV~e~~~~gsL~~~l~~~~-----------~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~k 652 (843)
+||||+++++|.+++.... ...+++..++.++.|++.||+|||+++ ++||||||+||++++++.+|
T Consensus 84 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~---i~H~dlkp~Nili~~~~~~k 160 (288)
T cd05093 84 MVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQH---FVHRDLATRNCLVGENLLVK 160 (288)
T ss_pred EEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeecccCcceEEEccCCcEE
Confidence 9999999999999997532 234899999999999999999999999 99999999999999999999
Q ss_pred EeeccccccCCCCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHh-CCCCCCCCcchHHHHHH
Q 003158 653 VADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNI 731 (843)
Q Consensus 653 l~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~ellt-g~~pf~~~~~~~~~~~~ 731 (843)
|+|||+++....... ........++..|+|||.+.+..++.++|||||||++|||++ |..||..... .+...
T Consensus 161 l~dfg~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~-~~~~~- 233 (288)
T cd05093 161 IGDFGMSRDVYSTDY-----YRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSN-NEVIE- 233 (288)
T ss_pred eccCCccccccCCce-----eecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH-HHHHH-
Confidence 999999976532210 011122335678999999999999999999999999999999 8888865432 11111
Q ss_pred HhhcccchhhccCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhh
Q 003158 732 AYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNM 788 (843)
Q Consensus 732 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~ 788 (843)
.+..+.....+..++..+.+++.+||+.+|.+||++.++.+.|+++...
T Consensus 234 --------~i~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~~~ 282 (288)
T cd05093 234 --------CITQGRVLQRPRTCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNLAKA 282 (288)
T ss_pred --------HHHcCCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHh
Confidence 1111222223344567799999999999999999999999999988754
No 131
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=1.1e-37 Score=357.13 Aligned_cols=251 Identities=22% Similarity=0.297 Sum_probs=207.7
Q ss_pred CCCCCCcccccCCeeEEEEEeC-C-CcEEEEEEeccCChhhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEEecC
Q 003158 512 NFNSSTQIGQGGYGKVYKGILP-D-GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFM 589 (843)
Q Consensus 512 ~~~~~~~lg~G~~g~Vy~~~~~-~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e~~ 589 (843)
.|.+.+.||+|+||.||+|... + ++.||+|.+..........+.+|+.+++.++||||+++++++...+..++||||+
T Consensus 68 ~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E~~ 147 (478)
T PTZ00267 68 MYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIMEYG 147 (478)
T ss_pred eEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEECC
Confidence 4888999999999999999853 4 6788999876555555567888999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhc--CCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCC
Q 003158 590 SNGTLRDQLSAK--SKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 667 (843)
Q Consensus 590 ~~gsL~~~l~~~--~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~ 667 (843)
++|+|.+++... ...++++..+..++.||+.||.|||+++ |+||||||+|||+++++.+||+|||+++.......
T Consensus 148 ~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~---ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~~ 224 (478)
T PTZ00267 148 SGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRK---MMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSVS 224 (478)
T ss_pred CCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCC---EEECCcCHHhEEECCCCcEEEEeCcCceecCCccc
Confidence 999999988642 3446888999999999999999999998 99999999999999999999999999986542210
Q ss_pred CCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhccCCCC
Q 003158 668 EGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMG 747 (843)
Q Consensus 668 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 747 (843)
........||+.|+|||++.+..++.++|||||||++|||++|+.||..... .... ..+..+...
T Consensus 225 -----~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~-~~~~---------~~~~~~~~~ 289 (478)
T PTZ00267 225 -----LDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQ-REIM---------QQVLYGKYD 289 (478)
T ss_pred -----cccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCH-HHHH---------HHHHhCCCC
Confidence 1122345699999999999999999999999999999999999999975432 1111 122223333
Q ss_pred CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 003158 748 SYPSECVEKFIKLALKCCQDETDARPSMSEVMR 780 (843)
Q Consensus 748 ~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~ 780 (843)
..+..++..+.+++..||..+|++||++.+++.
T Consensus 290 ~~~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~ 322 (478)
T PTZ00267 290 PFPCPVSSGMKALLDPLLSKNPALRPTTQQLLH 322 (478)
T ss_pred CCCccCCHHHHHHHHHHhccChhhCcCHHHHHh
Confidence 445566778999999999999999999998864
No 132
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=100.00 E-value=2.3e-37 Score=332.70 Aligned_cols=260 Identities=29% Similarity=0.512 Sum_probs=213.3
Q ss_pred cCCCCCCcccccCCeeEEEEEeC------CCcEEEEEEeccCChhhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEE
Q 003158 511 NNFNSSTQIGQGGYGKVYKGILP------DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQML 584 (843)
Q Consensus 511 ~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~l 584 (843)
.+|...+.||+|+||.||+|... ++..+++|.+........+.+.+|++++++++|+||+++++++...+..++
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 84 (291)
T cd05094 5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIM 84 (291)
T ss_pred HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCceEE
Confidence 35777889999999999999842 356799999887666666789999999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHhhcC--------------CCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCc
Q 003158 585 VYEFMSNGTLRDQLSAKS--------------KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFT 650 (843)
Q Consensus 585 V~e~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~ 650 (843)
||||+++++|.+++.... ...+++..++.++.||+.||+|||+++ |+||||||+||++++++.
T Consensus 85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~---i~H~dlkp~Nil~~~~~~ 161 (291)
T cd05094 85 VFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQH---FVHRDLATRNCLVGANLL 161 (291)
T ss_pred EEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCC---eeecccCcceEEEccCCc
Confidence 999999999999996532 234788999999999999999999999 999999999999999999
Q ss_pred EEEeeccccccCCCCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHh-CCCCCCCCcchHHHH
Q 003158 651 AKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREV 729 (843)
Q Consensus 651 ~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~ellt-g~~pf~~~~~~~~~~ 729 (843)
++|+|||++........ ........++..|+|||.+.+..++.++|||||||++|||+| |+.||....... ..
T Consensus 162 ~~l~dfg~a~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~-~~ 235 (291)
T cd05094 162 VKIGDFGMSRDVYSTDY-----YRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTE-VI 235 (291)
T ss_pred EEECCCCcccccCCCce-----eecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH-HH
Confidence 99999999976543211 111223446788999999999999999999999999999999 999986544321 11
Q ss_pred HHHhhcccchhhccCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhh
Q 003158 730 NIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNM 788 (843)
Q Consensus 730 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~ 788 (843)
. .+..+.....+..++..+.+++.+||+.+|.+||++.+++++|+++.+.
T Consensus 236 ~---------~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~~~ 285 (291)
T cd05094 236 E---------CITQGRVLERPRVCPKEVYDIMLGCWQREPQQRLNIKEIYKILHALGKA 285 (291)
T ss_pred H---------HHhCCCCCCCCccCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHhh
Confidence 1 1122222233445667899999999999999999999999999998654
No 133
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=100.00 E-value=8.8e-38 Score=334.75 Aligned_cols=258 Identities=23% Similarity=0.359 Sum_probs=203.6
Q ss_pred CCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCCh---hhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEEe
Q 003158 512 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 587 (843)
Q Consensus 512 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e 587 (843)
.|+..+.||+|+||.||+|... +++.||+|.+..... ...+.+.+|+.+++.++|++|+++++.+.+.+..++|||
T Consensus 1 ~f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e 80 (285)
T cd05630 1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEE
Confidence 3677789999999999999965 689999999865322 223457789999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCC
Q 003158 588 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 667 (843)
Q Consensus 588 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~ 667 (843)
|+++++|.+++.......+++..+..++.|++.||.|||+.+ |+||||||+||++++++.++|+|||++.......
T Consensus 81 ~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~---iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~- 156 (285)
T cd05630 81 LMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQER---IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ- 156 (285)
T ss_pred ecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCC---EEeCCCCHHHEEECCCCCEEEeeccceeecCCCc-
Confidence 999999999997655567899999999999999999999998 9999999999999999999999999987543211
Q ss_pred CCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhccCCCC
Q 003158 668 EGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMG 747 (843)
Q Consensus 668 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 747 (843)
......|+..|+|||++.+..++.++|||||||++|||++|+.||.........
T Consensus 157 -------~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~------------------- 210 (285)
T cd05630 157 -------TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKR------------------- 210 (285)
T ss_pred -------cccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccchH-------------------
Confidence 112346899999999999999999999999999999999999999753321100
Q ss_pred CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCCC-----CccCCCCCc
Q 003158 748 SYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPS-----SSSMLKHPY 822 (843)
Q Consensus 748 ~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~s-----a~e~L~Hp~ 822 (843)
+ ....+.. ..+.. ......+...+|+++||+.||++|+| ++|+++|||
T Consensus 211 ----~---~~~~~~~----~~~~~----------------~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~h~~ 263 (285)
T cd05630 211 ----E---EVERLVK----EVQEE----------------YSEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKEHPL 263 (285)
T ss_pred ----H---HHHhhhh----hhhhh----------------cCccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHcChh
Confidence 0 0000000 00000 00111223457888899999999998 899999999
Q ss_pred ccCC
Q 003158 823 VSSD 826 (843)
Q Consensus 823 f~~~ 826 (843)
|..-
T Consensus 264 ~~~~ 267 (285)
T cd05630 264 FKQI 267 (285)
T ss_pred hhcc
Confidence 9764
No 134
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=100.00 E-value=2.9e-37 Score=326.61 Aligned_cols=256 Identities=31% Similarity=0.470 Sum_probs=208.9
Q ss_pred HcCCCCCCcccccCCeeEEEEEeCCCcEEEEEEeccCChhhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEEecC
Q 003158 510 TNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFM 589 (843)
Q Consensus 510 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e~~ 589 (843)
.++|++.++||+|+||.||+|...+...||+|++.... ...+++.+|+++++.++|+||+++++++.+ +..++||||+
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~-~~~~lv~e~~ 82 (262)
T cd05071 5 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYM 82 (262)
T ss_pred hHHeeEeeecCCCCCCcEEEEEecCCceEEEEecccCc-cCHHHHHHHHHHHHhCCCCCcceEEEEECC-CCcEEEEEcC
Confidence 45789999999999999999998777789999987533 234678999999999999999999998754 5689999999
Q ss_pred CCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCCCC
Q 003158 590 SNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEG 669 (843)
Q Consensus 590 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~ 669 (843)
++|+|.+++.......+++..+..++.|+++||+|||+.+ ++||||||+||++++++.+||+|||.++.......
T Consensus 83 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~---i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~-- 157 (262)
T cd05071 83 SKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEY-- 157 (262)
T ss_pred CCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHCC---ccccccCcccEEEcCCCcEEeccCCceeecccccc--
Confidence 9999999997655556789999999999999999999998 99999999999999999999999999976543221
Q ss_pred cccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHh-CCCCCCCCcchHHHHHHHhhcccchhhccCCCCC
Q 003158 670 IVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGS 748 (843)
Q Consensus 670 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 748 (843)
.......++..|+|||+..+..++.++|||||||++|||++ |+.||....... .... +.......
T Consensus 158 ----~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~-~~~~---------~~~~~~~~ 223 (262)
T cd05071 158 ----TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE-VLDQ---------VERGYRMP 223 (262)
T ss_pred ----ccccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHH-HHHH---------HhcCCCCC
Confidence 11122346678999999998899999999999999999999 888886543211 1111 11111223
Q ss_pred CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhh
Q 003158 749 YPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIW 786 (843)
Q Consensus 749 ~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~ 786 (843)
.+.+++..+.+++.+|++.+|++||++.++.+.|+.++
T Consensus 224 ~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~~~~ 261 (262)
T cd05071 224 CPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYF 261 (262)
T ss_pred CccccCHHHHHHHHHHccCCcccCCCHHHHHHHHHHhc
Confidence 34567788999999999999999999999999998764
No 135
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=100.00 E-value=1.5e-37 Score=346.62 Aligned_cols=263 Identities=25% Similarity=0.380 Sum_probs=209.6
Q ss_pred HHHHcCCCCCCcccccCCeeEEEEEeC------CCcEEEEEEeccCCh-hhHHHHHHHHHHHHhcc-CCcccceeeeeec
Q 003158 507 ALATNNFNSSTQIGQGGYGKVYKGILP------DGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLH-HRNLVSLVGYCDE 578 (843)
Q Consensus 507 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~-h~nIv~l~~~~~~ 578 (843)
....++|.+.+.||+|+||.||+|... .+..||||++..... ...+.+.+|+++++++. ||||++++++|.+
T Consensus 33 ~~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~ 112 (400)
T cd05105 33 EFPRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTK 112 (400)
T ss_pred eccccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEcc
Confidence 344678889999999999999999852 134799999975433 33467899999999996 9999999999999
Q ss_pred CCcEEEEEecCCCCCHHHHHhhcC--------------------------------------------------------
Q 003158 579 EGEQMLVYEFMSNGTLRDQLSAKS-------------------------------------------------------- 602 (843)
Q Consensus 579 ~~~~~lV~e~~~~gsL~~~l~~~~-------------------------------------------------------- 602 (843)
.+..++|||||++|+|.++++...
T Consensus 113 ~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (400)
T cd05105 113 SGPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPML 192 (400)
T ss_pred CCceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhh
Confidence 999999999999999999886421
Q ss_pred --------------------------------------CCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEE
Q 003158 603 --------------------------------------KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNIL 644 (843)
Q Consensus 603 --------------------------------------~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NIL 644 (843)
...+++..+..++.|+++||+|||+.+ |+||||||+||+
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~---ivH~dikp~Nil 269 (400)
T cd05105 193 EIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASKN---CVHRDLAARNVL 269 (400)
T ss_pred hhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChHhEE
Confidence 124677888999999999999999998 999999999999
Q ss_pred EcCCCcEEEeeccccccCCCCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHh-CCCCCCCCc
Q 003158 645 LDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGK 723 (843)
Q Consensus 645 l~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~ellt-g~~pf~~~~ 723 (843)
+++++.+||+|||+++....... ........++..|+|||.+.+..++.++|||||||++|||++ |..||....
T Consensus 270 l~~~~~~kL~DfGla~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~ 344 (400)
T cd05105 270 LAQGKIVKICDFGLARDIMHDSN-----YVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMI 344 (400)
T ss_pred EeCCCEEEEEeCCcceecccccc-----ccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccc
Confidence 99999999999999986532211 011122346788999999999999999999999999999997 889986532
Q ss_pred chHHHHHHHhhcccchhhccCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhh
Q 003158 724 NIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIW 786 (843)
Q Consensus 724 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~ 786 (843)
....... .+..+.....+..++..+.+++.+||+.+|++||++.++.+.|+.+.
T Consensus 345 ~~~~~~~---------~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~l~ 398 (400)
T cd05105 345 VDSTFYN---------KIKSGYRMAKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSDIVESLL 398 (400)
T ss_pred hhHHHHH---------HHhcCCCCCCCccCCHHHHHHHHHHCccCHhHCcCHHHHHHHHHHHc
Confidence 2111111 11112222345567788999999999999999999999999998754
No 136
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=100.00 E-value=7.1e-38 Score=346.55 Aligned_cols=291 Identities=21% Similarity=0.283 Sum_probs=210.2
Q ss_pred HHHcCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCC--hhhHHHHHHHHHHHHhccCCcccceeeeeecC-----
Q 003158 508 LATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE----- 579 (843)
Q Consensus 508 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~----- 579 (843)
...++|++.+.||+|+||.||+|... .++.||||++.... ....+.+.+|+.+++.++||||+++++++...
T Consensus 14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 93 (355)
T cd07874 14 TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEE 93 (355)
T ss_pred hhhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeeccccccc
Confidence 34578999999999999999999864 68999999987532 23346778999999999999999999988543
Q ss_pred -CcEEEEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccc
Q 003158 580 -GEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGL 658 (843)
Q Consensus 580 -~~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGl 658 (843)
...++||||++ +++.+.+.. .+++..+..++.|+++||+|||+++ |+||||||+||++++++.+||+|||+
T Consensus 94 ~~~~~lv~e~~~-~~l~~~~~~----~l~~~~~~~~~~qi~~aL~~LH~~g---ivHrDikp~Nill~~~~~~kl~Dfg~ 165 (355)
T cd07874 94 FQDVYLVMELMD-ANLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGL 165 (355)
T ss_pred cceeEEEhhhhc-ccHHHHHhh----cCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCChHHEEECCCCCEEEeeCcc
Confidence 35799999996 577777643 3778888999999999999999999 99999999999999999999999999
Q ss_pred cccCCCCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccc
Q 003158 659 SRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMM 738 (843)
Q Consensus 659 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~ 738 (843)
++..... .......||..|+|||++.+..++.++|||||||++|||++|+.||........ .....
T Consensus 166 ~~~~~~~--------~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~-~~~~~----- 231 (355)
T cd07874 166 ARTAGTS--------FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ-WNKVI----- 231 (355)
T ss_pred cccCCCc--------cccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHH-----
Confidence 9764321 112334689999999999999999999999999999999999999976543222 11111
Q ss_pred hhhccCCCCCCCHHHHHHHHHHHHHhcccCCCCC-CCHHHHH-HHHHHh-hhhCCCCCCCCCccccCCCCCCCCCCCCCc
Q 003158 739 FSVIDGNMGSYPSECVEKFIKLALKCCQDETDAR-PSMSEVM-RELESI-WNMMPESDTKTPEFINSEHTSKEETPPSSS 815 (843)
Q Consensus 739 ~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~R-Ps~~~vl-~~L~~~-~~~~~~~~~~~~dll~~~L~~dp~~R~sa~ 815 (843)
. ..+....++...+...+..+....|... ..+.... ..+... ..........+.+|+.+||+.||++|||++
T Consensus 232 ----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ 306 (355)
T cd07874 232 ----E-QLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVD 306 (355)
T ss_pred ----H-HhCCCCHHHHHhhcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHH
Confidence 0 0112223333333333333332222210 0111000 000000 000011223456899999999999999999
Q ss_pred cCCCCCcccC
Q 003158 816 SMLKHPYVSS 825 (843)
Q Consensus 816 e~L~Hp~f~~ 825 (843)
|+|+||||..
T Consensus 307 ell~hp~~~~ 316 (355)
T cd07874 307 EALQHPYINV 316 (355)
T ss_pred HHhcCcchhc
Confidence 9999999964
No 137
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=5.1e-38 Score=344.91 Aligned_cols=255 Identities=30% Similarity=0.458 Sum_probs=214.1
Q ss_pred CCCCCcccccCCeeEEEEEe-CCC----cEEEEEEeccC-ChhhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEE
Q 003158 513 FNSSTQIGQGGYGKVYKGIL-PDG----TVVAVKRAQEG-SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 586 (843)
Q Consensus 513 ~~~~~~lg~G~~g~Vy~~~~-~~~----~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~ 586 (843)
....++||+|+||+||+|.| +.| -+||+|++... ..+..+++.+|+-+|.+++|||+++++|+|..+. ..||+
T Consensus 698 lkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~qlvt 776 (1177)
T KOG1025|consen 698 LKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLST-LQLVT 776 (1177)
T ss_pred hhhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HHHHH
Confidence 34467899999999999995 444 46899988754 3445678999999999999999999999998765 88999
Q ss_pred ecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCC
Q 003158 587 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 666 (843)
Q Consensus 587 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~ 666 (843)
+||+.|+|.++++.+ +..+.....+.|..|||+||.|||.+. +|||||.++||||.+-..+||.|||+|+.+...+
T Consensus 777 q~mP~G~LlDyvr~h-r~~igsq~lLnw~~QIAkgM~YLe~qr---lVHrdLaaRNVLVksP~hvkitdfgla~ll~~d~ 852 (1177)
T KOG1025|consen 777 QLMPLGCLLDYVREH-RDNIGSQDLLNWCYQIAKGMKYLEEQR---LVHRDLAARNVLVKSPNHVKITDFGLAKLLAPDE 852 (1177)
T ss_pred HhcccchHHHHHHHh-hccccHHHHHHHHHHHHHHHHHHHhcc---hhhhhhhhhheeecCCCeEEEEecchhhccCccc
Confidence 999999999999874 456888999999999999999999998 9999999999999999999999999999887544
Q ss_pred CCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHh-CCCCCCCCcchHHHHHHHhhcccchhhccCC
Q 003158 667 IEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGN 745 (843)
Q Consensus 667 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 745 (843)
.+ .......-.+.|||-|.+....|+.++|||||||++||++| |..|++.... +. .-..+..+.
T Consensus 853 ~e-----y~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~--~e--------I~dlle~ge 917 (1177)
T KOG1025|consen 853 KE-----YSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPA--EE--------IPDLLEKGE 917 (1177)
T ss_pred cc-----ccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCH--HH--------hhHHHhccc
Confidence 21 12223344578999999999999999999999999999999 9999976432 11 111234455
Q ss_pred CCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhh
Q 003158 746 MGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWN 787 (843)
Q Consensus 746 ~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~ 787 (843)
+.+.|+.|+.+++.++.+||..|+..||+++++...+.++..
T Consensus 918 RLsqPpiCtiDVy~~mvkCwmid~~~rp~fkel~~~fs~~ar 959 (1177)
T KOG1025|consen 918 RLSQPPICTIDVYMVMVKCWMIDADSRPTFKELAEEFSRMAR 959 (1177)
T ss_pred cCCCCCCccHHHHHHHHHHhccCcccCccHHHHHHHHHHHhc
Confidence 677899999999999999999999999999999988887644
No 138
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=100.00 E-value=5.6e-38 Score=345.74 Aligned_cols=281 Identities=23% Similarity=0.367 Sum_probs=206.7
Q ss_pred HHHcCCCCCCcccccCCeeEEEEEe-CCCcEEEEEEeccCCh--hhHHHHHHHHHHHHhccCCcccceeeeeecC-----
Q 003158 508 LATNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE----- 579 (843)
Q Consensus 508 ~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~----- 579 (843)
...++|++.+.||+|+||+||+|.. .+++.||||++..... ...+.+.+|+++++.++||||+++++++...
T Consensus 12 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 91 (343)
T cd07878 12 EVPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIEN 91 (343)
T ss_pred hhhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccccc
Confidence 3457899999999999999999996 4688999999875322 2345678899999999999999999987533
Q ss_pred -CcEEEEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccc
Q 003158 580 -GEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGL 658 (843)
Q Consensus 580 -~~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGl 658 (843)
...++++|++ +++|.+++.. ..+++..+..++.||++||.|||+++ |+||||||+||++++++.+||+|||+
T Consensus 92 ~~~~~~~~~~~-~~~l~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~~---ivHrdikp~Nil~~~~~~~kl~Dfg~ 164 (343)
T cd07878 92 FNEVYLVTNLM-GADLNNIVKC---QKLSDEHVQFLIYQLLRGLKYIHSAG---IIHRDLKPSNVAVNEDCELRILDFGL 164 (343)
T ss_pred cCcEEEEeecC-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC---eecccCChhhEEECCCCCEEEcCCcc
Confidence 4579999998 7899988753 34889999999999999999999999 99999999999999999999999999
Q ss_pred cccCCCCCCCCcccceeeeeecccCCccCchhccc-CCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhccc
Q 003158 659 SRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSM 737 (843)
Q Consensus 659 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~ 737 (843)
++..... .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||...... +.+.....
T Consensus 165 ~~~~~~~----------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-~~~~~~~~--- 230 (343)
T cd07878 165 ARQADDE----------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYI-DQLKRIME--- 230 (343)
T ss_pred ceecCCC----------cCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHH-HHHHHHHH---
Confidence 9865321 123468899999999987 56889999999999999999999999754422 21111100
Q ss_pred chhhccCCCCCCCHHHHHHHH-HHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCCCCcc
Q 003158 738 MFSVIDGNMGSYPSECVEKFI-KLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSS 816 (843)
Q Consensus 738 ~~~~~~~~~~~~~~~~~~~l~-~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~sa~e 816 (843)
. .+..+.+....+. .........-|. .|.. + ....+...++.+.+|+.+||..||++|+|++|
T Consensus 231 ---~----~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~-------~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~e 294 (343)
T cd07878 231 ---V----VGTPSPEVLKKISSEHARKYIQSLPH-MPQQ-D-------LKKIFRGANPLAIDLLEKMLVLDSDKRISASE 294 (343)
T ss_pred ---H----hCCCCHHHHHhcchhhHHHHhhcccc-ccch-h-------HHHhccCCCHHHHHHHHHHcCCChhhCCCHHH
Confidence 0 0111111111110 001111111111 1100 0 11112233445678999999999999999999
Q ss_pred CCCCCcccC
Q 003158 817 MLKHPYVSS 825 (843)
Q Consensus 817 ~L~Hp~f~~ 825 (843)
+|+||||..
T Consensus 295 ll~hp~~~~ 303 (343)
T cd07878 295 ALAHPYFSQ 303 (343)
T ss_pred HhcCcchhc
Confidence 999999975
No 139
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=100.00 E-value=2e-37 Score=327.42 Aligned_cols=254 Identities=30% Similarity=0.480 Sum_probs=208.7
Q ss_pred HcCCCCCCcccccCCeeEEEEEeCCCcEEEEEEeccCChhhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEEecC
Q 003158 510 TNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFM 589 (843)
Q Consensus 510 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e~~ 589 (843)
.++|++.+.||+|+||.||+|..+++..||+|.+..... ..+.+.+|+.++++++|+|++++++++. ....++||||+
T Consensus 5 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~~ 82 (260)
T cd05070 5 RESLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTM-SPESFLEEAQIMKKLRHDKLVQLYAVVS-EEPIYIVTEYM 82 (260)
T ss_pred hHHhhhhheeccccCceEEEEEecCCceeEEEEecCCCC-CHHHHHHHHHHHHhcCCCceEEEEeEEC-CCCcEEEEEec
Confidence 457888999999999999999988888999999875433 3467899999999999999999999885 45689999999
Q ss_pred CCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCCCC
Q 003158 590 SNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEG 669 (843)
Q Consensus 590 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~ 669 (843)
++++|.+++.......+++..++.++.|++.||+|||+.+ |+||||||+||++++++.++|+|||++........
T Consensus 83 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~---i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~-- 157 (260)
T cd05070 83 SKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMN---YIHRDLRSANILVGDGLVCKIADFGLARLIEDNEY-- 157 (260)
T ss_pred CCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCccceEEEeCCceEEeCCceeeeeccCccc--
Confidence 9999999997755556899999999999999999999998 99999999999999999999999999976543211
Q ss_pred cccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHh-CCCCCCCCcchHHHHHHHhhcccchhhccCCCCC
Q 003158 670 IVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGS 748 (843)
Q Consensus 670 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 748 (843)
.......++..|+|||.+.+..++.++||||||+++|||++ |..||..... .+.... +......+
T Consensus 158 ----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~-~~~~~~---------~~~~~~~~ 223 (260)
T cd05070 158 ----TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNN-REVLEQ---------VERGYRMP 223 (260)
T ss_pred ----ccccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCH-HHHHHH---------HHcCCCCC
Confidence 11112235678999999998899999999999999999999 8888865432 111111 11122223
Q ss_pred CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 003158 749 YPSECVEKFIKLALKCCQDETDARPSMSEVMRELES 784 (843)
Q Consensus 749 ~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~ 784 (843)
.+...+..+.+++.+|+..+|++||++.++.+.|++
T Consensus 224 ~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 259 (260)
T cd05070 224 CPQDCPISLHELMLQCWKKDPEERPTFEYLQSFLED 259 (260)
T ss_pred CCCcCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 455667889999999999999999999999988875
No 140
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.9e-38 Score=313.35 Aligned_cols=284 Identities=19% Similarity=0.312 Sum_probs=219.5
Q ss_pred ccHHHHHHHHcCCCCCCcccccCCeeEEEEE-eCCCcEEEEEEeccCChhhHHHHHHHHHHHHhcc-CCcccceeeeeec
Q 003158 501 FTYGEMALATNNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLH-HRNLVSLVGYCDE 578 (843)
Q Consensus 501 ~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~nIv~l~~~~~~ 578 (843)
-+++++...++ +.||+|+++.|.-++ +.+|..+|||++.+......+++.+|++++.+.+ |+||+.++++|++
T Consensus 73 g~F~d~YkLt~-----e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEd 147 (463)
T KOG0607|consen 73 GKFEDMYKLTS-----ELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFED 147 (463)
T ss_pred chHHHHHHhHH-----HHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhcc
Confidence 34677777774 679999999999998 6789999999999876667889999999999985 9999999999999
Q ss_pred CCcEEEEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCC---cEEEee
Q 003158 579 EGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKF---TAKVAD 655 (843)
Q Consensus 579 ~~~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~---~~kl~D 655 (843)
+...|||||-|.||+|...|+++. .+++.++.+++.+|+.||.+||.+| |.|||+||+|||..+-. -+||+|
T Consensus 148 d~~FYLVfEKm~GGplLshI~~~~--~F~E~EAs~vvkdia~aLdFlH~kg---IAHRDlKPENiLC~~pn~vsPvKiCD 222 (463)
T KOG0607|consen 148 DTRFYLVFEKMRGGPLLSHIQKRK--HFNEREASRVVKDIASALDFLHTKG---IAHRDLKPENILCESPNKVSPVKICD 222 (463)
T ss_pred cceEEEEEecccCchHHHHHHHhh--hccHHHHHHHHHHHHHHHHHHhhcC---cccccCCccceeecCCCCcCceeeec
Confidence 999999999999999999997654 4899999999999999999999999 99999999999997654 489999
Q ss_pred ccccccCCCCCCCCcccceeeeeecccCCccCchhccc-----CCCCchhhhHHHHHHHHHHHhCCCCCCCCcchH-HHH
Q 003158 656 FGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT-----HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIV-REV 729 (843)
Q Consensus 656 fGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~-~~~ 729 (843)
|.++.-......-.+.........+|+..|||||+..- ..|+.+.|.||+||++|-|+.|..||.+.-... .|.
T Consensus 223 fDLgSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWd 302 (463)
T KOG0607|consen 223 FDLGSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWD 302 (463)
T ss_pred cccccccccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCcc
Confidence 99987654332222222333456779999999998742 458889999999999999999999997532100 000
Q ss_pred HH---HhhcccchhhccCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCC
Q 003158 730 NI---AYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTS 806 (843)
Q Consensus 730 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~ 806 (843)
+. ......+++.+......+|++.|..+ +..++|++..+|..
T Consensus 303 rGe~Cr~CQ~~LFesIQEGkYeFPdkdWahI-----------------------------------S~eakdlisnLlvr 347 (463)
T KOG0607|consen 303 RGEVCRVCQNKLFESIQEGKYEFPDKDWAHI-----------------------------------SSEAKDLISNLLVR 347 (463)
T ss_pred CCCccHHHHHHHHHHHhccCCcCChhhhHHh-----------------------------------hHHHHHHHHHHHhc
Confidence 00 00011122333333334444444333 22345788889999
Q ss_pred CCCCCCCCccCCCCCcccCCCCC
Q 003158 807 KEETPPSSSSMLKHPYVSSDVSG 829 (843)
Q Consensus 807 dp~~R~sa~e~L~Hp~f~~~~~~ 829 (843)
|+..|.+|.+.++|||+..-...
T Consensus 348 da~~rlsa~~vlnhPw~~~~~~e 370 (463)
T KOG0607|consen 348 DAKQRLSAAQVLNHPWVQRCAPE 370 (463)
T ss_pred cHHhhhhhhhccCCccccccchh
Confidence 99999999999999999775554
No 141
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=100.00 E-value=1.6e-37 Score=331.37 Aligned_cols=258 Identities=28% Similarity=0.472 Sum_probs=207.4
Q ss_pred HHHcCCCCCCcccccCCeeEEEEEeC------CCcEEEEEEeccCC-hhhHHHHHHHHHHHHhccCCcccceeeeeecCC
Q 003158 508 LATNNFNSSTQIGQGGYGKVYKGILP------DGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEG 580 (843)
Q Consensus 508 ~~~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~ 580 (843)
..+++|+..+.||+|+||.||+|.+. .+..||+|.+.... .....++.+|+.+++.++|+||+++++++.+..
T Consensus 3 ~~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~ 82 (277)
T cd05062 3 VAREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQ 82 (277)
T ss_pred ccHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCC
Confidence 45678999999999999999999753 25679999986432 234567889999999999999999999999999
Q ss_pred cEEEEEecCCCCCHHHHHhhcCC--------CCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEE
Q 003158 581 EQMLVYEFMSNGTLRDQLSAKSK--------EPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAK 652 (843)
Q Consensus 581 ~~~lV~e~~~~gsL~~~l~~~~~--------~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~k 652 (843)
..++||||+++|+|.+++..... ..+++..+..++.|+++||+|||+.+ ++||||||+||++++++.++
T Consensus 83 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~---~vH~dlkp~Nil~~~~~~~~ 159 (277)
T cd05062 83 PTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVK 159 (277)
T ss_pred CeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCcchheEEEcCCCCEE
Confidence 99999999999999999965321 23577888999999999999999998 99999999999999999999
Q ss_pred EeeccccccCCCCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHh-CCCCCCCCcchHHHHHH
Q 003158 653 VADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNI 731 (843)
Q Consensus 653 l~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~ellt-g~~pf~~~~~~~~~~~~ 731 (843)
|+|||+++........ .......+++.|+|||++.+..++.++|||||||++|||++ |..||..... .+...
T Consensus 160 l~dfg~~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~-~~~~~- 232 (277)
T cd05062 160 IGDFGMTRDIYETDYY-----RKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSN-EQVLR- 232 (277)
T ss_pred ECCCCCccccCCccee-----ecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCH-HHHHH-
Confidence 9999998765432210 11112245678999999999899999999999999999999 6888865432 11111
Q ss_pred HhhcccchhhccCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 003158 732 AYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELE 783 (843)
Q Consensus 732 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~ 783 (843)
.+........+..++..+.+++.+||+.+|++||++.++++.++
T Consensus 233 --------~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~ 276 (277)
T cd05062 233 --------FVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 276 (277)
T ss_pred --------HHHcCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHhh
Confidence 11222233445566778999999999999999999999998875
No 142
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=100.00 E-value=2.5e-38 Score=350.71 Aligned_cols=208 Identities=25% Similarity=0.373 Sum_probs=175.0
Q ss_pred cCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCC---hhhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEE
Q 003158 511 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 586 (843)
Q Consensus 511 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~ 586 (843)
++|+..+.||+|+||+||+|... +++.||+|++.... ....+.+.+|++++..++|+||+++++++.+.+..++||
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~ 80 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIM 80 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 46888999999999999999965 68999999987432 223456788999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCC
Q 003158 587 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 666 (843)
Q Consensus 587 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~ 666 (843)
||+++|+|.+++... ..+++..+..++.|++.||+|||+++ |+||||||+|||++.++.+||+|||++.......
T Consensus 81 E~~~gg~L~~~l~~~--~~l~~~~~~~~~~qi~~~L~~lH~~g---ivHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~~ 155 (360)
T cd05627 81 EFLPGGDMMTLLMKK--DTLSEEATQFYIAETVLAIDAIHQLG---FIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAH 155 (360)
T ss_pred eCCCCccHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC---eEccCCCHHHEEECCCCCEEEeeccCCccccccc
Confidence 999999999999654 35888999999999999999999999 9999999999999999999999999987543211
Q ss_pred CCCc----------------------------ccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCC
Q 003158 667 IEGI----------------------------VPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQP 718 (843)
Q Consensus 667 ~~~~----------------------------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~p 718 (843)
.... ..........||+.|+|||++.+..++.++|||||||++|||++|+.|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~P 235 (360)
T cd05627 156 RTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPP 235 (360)
T ss_pred ccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCCCC
Confidence 0000 000011234699999999999999999999999999999999999999
Q ss_pred CCCCc
Q 003158 719 ISHGK 723 (843)
Q Consensus 719 f~~~~ 723 (843)
|....
T Consensus 236 f~~~~ 240 (360)
T cd05627 236 FCSET 240 (360)
T ss_pred CCCCC
Confidence 97543
No 143
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=100.00 E-value=2.2e-37 Score=326.27 Aligned_cols=252 Identities=30% Similarity=0.472 Sum_probs=206.0
Q ss_pred cCCCCCCcccccCCeeEEEEEeCCCcEEEEEEeccCChhhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEEecCC
Q 003158 511 NNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMS 590 (843)
Q Consensus 511 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e~~~ 590 (843)
++|+..+.||+|+||+||+|.+.++..||+|.+.... ...+++.+|+.++++++||||+++++++.+.+..++||||++
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 82 (256)
T cd05113 4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYMS 82 (256)
T ss_pred HHeEEeeEecCcccceEEEEEecCCCcEEEEEcCCCc-ccHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEcCC
Confidence 4577889999999999999998777789999887533 335678999999999999999999999998889999999999
Q ss_pred CCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCCCCc
Q 003158 591 NGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGI 670 (843)
Q Consensus 591 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~ 670 (843)
+|+|.+++..... .+++..++.++.||+.||+|||+.+ ++|+||||+||++++++.+||+|||.++......
T Consensus 83 ~~~l~~~i~~~~~-~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~---- 154 (256)
T cd05113 83 NGCLLNYLREHGK-RFQPSQLLEMCKDVCEGMAYLESKQ---FIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDE---- 154 (256)
T ss_pred CCcHHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHHhCC---eeccccCcceEEEcCCCCEEECCCccceecCCCc----
Confidence 9999999976433 6899999999999999999999998 9999999999999999999999999987653221
Q ss_pred ccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHh-CCCCCCCCcchHHHHHHHhhcccchhhccCCCCCC
Q 003158 671 VPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSY 749 (843)
Q Consensus 671 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 749 (843)
........++..|+|||.+.+..++.++|||||||++|||++ |+.||....... ... .+..+.....
T Consensus 155 --~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~-~~~---------~~~~~~~~~~ 222 (256)
T cd05113 155 --YTSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSE-TVE---------KVSQGLRLYR 222 (256)
T ss_pred --eeecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHH-HHH---------HHhcCCCCCC
Confidence 111112335678999999998889999999999999999999 999986544211 111 1122222223
Q ss_pred CHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 003158 750 PSECVEKFIKLALKCCQDETDARPSMSEVMRELE 783 (843)
Q Consensus 750 ~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~ 783 (843)
+...+..+.+++.+||+.+|.+||++.+++..++
T Consensus 223 ~~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~~~ 256 (256)
T cd05113 223 PHLASEKVYAIMYSCWHEKAEERPTFQQLLSSIE 256 (256)
T ss_pred CCCCCHHHHHHHHHHcCCCcccCCCHHHHHHhhC
Confidence 4445678899999999999999999999987653
No 144
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=3.3e-37 Score=330.10 Aligned_cols=257 Identities=28% Similarity=0.488 Sum_probs=206.7
Q ss_pred cCCCCCCcccccCCeeEEEEEe-----CCCcEEEEEEeccCC-hhhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEE
Q 003158 511 NNFNSSTQIGQGGYGKVYKGIL-----PDGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQML 584 (843)
Q Consensus 511 ~~~~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~l 584 (843)
++|++.+.||+|+||+||+|.. .++..||+|.+.... ....+++.+|++++++++||||+++++++......++
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 84 (283)
T cd05090 5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVCM 84 (283)
T ss_pred hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCceEE
Confidence 4577789999999999999984 246789999987533 3334678899999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHhhcC---------------CCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCC
Q 003158 585 VYEFMSNGTLRDQLSAKS---------------KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKF 649 (843)
Q Consensus 585 V~e~~~~gsL~~~l~~~~---------------~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~ 649 (843)
||||+++++|.+++.... ...+++.....++.|++.||+|||+++ |+||||||+||++++++
T Consensus 85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~---i~H~dlkp~nili~~~~ 161 (283)
T cd05090 85 LFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHF---FVHKDLAARNILIGEQL 161 (283)
T ss_pred EEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcC---eehhccccceEEEcCCC
Confidence 999999999999985432 234788889999999999999999998 99999999999999999
Q ss_pred cEEEeeccccccCCCCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHh-CCCCCCCCcchHHH
Q 003158 650 TAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVRE 728 (843)
Q Consensus 650 ~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~ellt-g~~pf~~~~~~~~~ 728 (843)
.+||+|||+++....... ........++..|+|||++.+..++.++|||||||++|||++ |..||..... ...
T Consensus 162 ~~kl~dfg~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~-~~~ 235 (283)
T cd05090 162 HVKISDLGLSREIYSADY-----YRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSN-QEV 235 (283)
T ss_pred cEEeccccccccccCCcc-----eecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCH-HHH
Confidence 999999999976543221 111223345678999999998889999999999999999999 9889865432 111
Q ss_pred HHHHhhcccchhhccCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHh
Q 003158 729 VNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 785 (843)
Q Consensus 729 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~ 785 (843)
... +........+..++..+.+++.+||+.+|.+||++.++.+.+..+
T Consensus 236 ~~~---------~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~~ 283 (283)
T cd05090 236 IEM---------VRKRQLLPCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTRLRSW 283 (283)
T ss_pred HHH---------HHcCCcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHhhcC
Confidence 111 111112234556678899999999999999999999999888753
No 145
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=100.00 E-value=5.1e-38 Score=342.18 Aligned_cols=196 Identities=29% Similarity=0.388 Sum_probs=160.1
Q ss_pred CcccccCCeeEEEEEeC---CCcEEEEEEeccCChhhHHHHHHHHHHHHhccCCcccceeeeee--cCCcEEEEEecCCC
Q 003158 517 TQIGQGGYGKVYKGILP---DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCD--EEGEQMLVYEFMSN 591 (843)
Q Consensus 517 ~~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~--~~~~~~lV~e~~~~ 591 (843)
.+||+|+||+||+|... ++..||+|.+.... ....+.+|+++++.++||||+++++++. .+...++||||++
T Consensus 7 ~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~- 83 (317)
T cd07867 7 CKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG--ISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAE- 83 (317)
T ss_pred eEeccCCCeeEEEEEecCCCccceEEEEEecCCC--CcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeeeC-
Confidence 57999999999999964 35789999987532 2346788999999999999999999984 3567899999995
Q ss_pred CCHHHHHhhc-------CCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEE----cCCCcEEEeeccccc
Q 003158 592 GTLRDQLSAK-------SKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILL----DHKFTAKVADFGLSR 660 (843)
Q Consensus 592 gsL~~~l~~~-------~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl----~~~~~~kl~DfGla~ 660 (843)
++|.+++... ....+++..++.++.||+.||.|||+.+ |+||||||+||++ ++++.+||+|||+++
T Consensus 84 ~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~ 160 (317)
T cd07867 84 HDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANW---VLHRDLKPANILVMGEGPERGRVKIADMGFAR 160 (317)
T ss_pred CcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCC---EEcCCCCHHHEEEccCCCCCCcEEEeecccee
Confidence 5888877532 1235788889999999999999999999 9999999999999 566799999999998
Q ss_pred cCCCCCCCCcccceeeeeecccCCccCchhccc-CCCCchhhhHHHHHHHHHHHhCCCCCCCC
Q 003158 661 LAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHG 722 (843)
Q Consensus 661 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwS~G~~l~elltg~~pf~~~ 722 (843)
........ ........||+.|+|||++.+ ..++.++|||||||++|||+||+.||...
T Consensus 161 ~~~~~~~~----~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~ 219 (317)
T cd07867 161 LFNSPLKP----LADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR 219 (317)
T ss_pred ccCCCccc----ccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccc
Confidence 65432210 112234568899999999976 45789999999999999999999999754
No 146
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=100.00 E-value=3.1e-37 Score=338.13 Aligned_cols=263 Identities=27% Similarity=0.455 Sum_probs=208.1
Q ss_pred HHHcCCCCCCcccccCCeeEEEEEeC------CCcEEEEEEeccCCh-hhHHHHHHHHHHHHhc-cCCcccceeeeeec-
Q 003158 508 LATNNFNSSTQIGQGGYGKVYKGILP------DGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRL-HHRNLVSLVGYCDE- 578 (843)
Q Consensus 508 ~~~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~- 578 (843)
...++|++.+.||+|+||.||+|... +++.||+|++..... ...+.+.+|+++++++ +|+||++++++|..
T Consensus 4 ~~~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~ 83 (337)
T cd05054 4 FPRDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKP 83 (337)
T ss_pred cCHHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecC
Confidence 34568999999999999999999742 257899999875432 2345678899999999 89999999998864
Q ss_pred CCcEEEEEecCCCCCHHHHHhhcC--------------------------------------------------------
Q 003158 579 EGEQMLVYEFMSNGTLRDQLSAKS-------------------------------------------------------- 602 (843)
Q Consensus 579 ~~~~~lV~e~~~~gsL~~~l~~~~-------------------------------------------------------- 602 (843)
+...++||||+++|+|.+++....
T Consensus 84 ~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (337)
T cd05054 84 GGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGD 163 (337)
T ss_pred CCCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhh
Confidence 457889999999999999986432
Q ss_pred ---CCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCCCCcccceeeeee
Q 003158 603 ---KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVV 679 (843)
Q Consensus 603 ---~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~ 679 (843)
..++++..+..++.||+.||+|||+.+ |+||||||+||++++++.+||+|||+++....... .......
T Consensus 164 ~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~---ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~-----~~~~~~~ 235 (337)
T cd05054 164 ELYKEPLTLEDLISYSFQVARGMEFLASRK---CIHRDLAARNILLSENNVVKICDFGLARDIYKDPD-----YVRKGDA 235 (337)
T ss_pred HHhhcCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCcceEEEeCCCcEEEeccccchhcccCcc-----hhhccCC
Confidence 126789999999999999999999998 99999999999999999999999999986543211 0111233
Q ss_pred cccCCccCchhcccCCCCchhhhHHHHHHHHHHHh-CCCCCCCCcchHHHHHHHhhcccchhhccCCCCCCCHHHHHHHH
Q 003158 680 KGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFI 758 (843)
Q Consensus 680 ~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 758 (843)
.++..|+|||++.+..++.++|||||||++|||++ |..||........ ..... ..+.....+..+.+++.
T Consensus 236 ~~~~~y~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~-~~~~~--------~~~~~~~~~~~~~~~~~ 306 (337)
T cd05054 236 RLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEE-FCRRL--------KEGTRMRAPEYATPEIY 306 (337)
T ss_pred CCCccccCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHH-HHHHH--------hccCCCCCCccCCHHHH
Confidence 45678999999999999999999999999999998 9999965332111 11111 11112223455667899
Q ss_pred HHHHHhcccCCCCCCCHHHHHHHHHHhhh
Q 003158 759 KLALKCCQDETDARPSMSEVMRELESIWN 787 (843)
Q Consensus 759 ~l~~~c~~~~p~~RPs~~~vl~~L~~~~~ 787 (843)
+++.+||+.+|++||++.++++.|+++..
T Consensus 307 ~l~~~cl~~~p~~RPs~~ell~~l~~~~~ 335 (337)
T cd05054 307 SIMLDCWHNNPEDRPTFSELVEILGDLLQ 335 (337)
T ss_pred HHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 99999999999999999999999998653
No 147
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-38 Score=328.42 Aligned_cols=277 Identities=23% Similarity=0.320 Sum_probs=219.2
Q ss_pred HHcCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCCh---hhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEE
Q 003158 509 ATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQML 584 (843)
Q Consensus 509 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~l 584 (843)
..+.|..-++||+|+||.||-+..+ +|+.+|.|.+.+... .++.....|-.+|++++.+.||.+--.|...+.+|+
T Consensus 183 t~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LCl 262 (591)
T KOG0986|consen 183 TKNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALCL 262 (591)
T ss_pred cccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceEE
Confidence 3467888899999999999999865 699999998876443 345667889999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCC
Q 003158 585 VYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPV 664 (843)
Q Consensus 585 V~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~ 664 (843)
|+..|.||+|.-+|...+...+++..++.++.+|+.||++||+++ ||.||+||+|||+|+.|+++|+|+|+|..+..
T Consensus 263 VLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~---iVYRDLKPeNILLDd~GhvRISDLGLAvei~~ 339 (591)
T KOG0986|consen 263 VLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRRR---IVYRDLKPENILLDDHGHVRISDLGLAVEIPE 339 (591)
T ss_pred EEEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhcc---eeeccCChhheeeccCCCeEeeccceEEecCC
Confidence 999999999999998887778999999999999999999999999 99999999999999999999999999987754
Q ss_pred CCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhccC
Q 003158 665 PDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDG 744 (843)
Q Consensus 665 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 744 (843)
.+ .....+||.+|||||++....|+...|+||+||++|||+.|+.||.....-..+.. +...+..
T Consensus 340 g~--------~~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk~eE-------vdrr~~~ 404 (591)
T KOG0986|consen 340 GK--------PIRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVKREE-------VDRRTLE 404 (591)
T ss_pred CC--------ccccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhhhhHHH-------HHHHHhc
Confidence 32 23444799999999999999999999999999999999999999965432211100 0011111
Q ss_pred CCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCC-----CCCccCCC
Q 003158 745 NMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETP-----PSSSSMLK 819 (843)
Q Consensus 745 ~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R-----~sa~e~L~ 819 (843)
....+++.++++. .++++.+|+-||++| =.|+++-+
T Consensus 405 ~~~ey~~kFS~ea---------------------------------------kslc~~LL~Kdp~~RLGcrg~ga~evk~ 445 (591)
T KOG0986|consen 405 DPEEYSDKFSEEA---------------------------------------KSLCEGLLTKDPEKRLGCRGEGAQEVKE 445 (591)
T ss_pred chhhcccccCHHH---------------------------------------HHHHHHHHccCHHHhccCCCcCcchhhh
Confidence 1112233333333 345555566666665 36789999
Q ss_pred CCcccCCCCCCccccccCCCCCC
Q 003158 820 HPYVSSDVSGSNLVSGVIPTITP 842 (843)
Q Consensus 820 Hp~f~~~~~~~~~~~~~~~~~~~ 842 (843)
||||..-.+...-.+-..|||-|
T Consensus 446 HpfFk~lnw~rleagml~PPfiP 468 (591)
T KOG0986|consen 446 HPFFKDLNWRRLEAGMLEPPFIP 468 (591)
T ss_pred CcccccCCHhHHhccCCCCCCCC
Confidence 99999977754444446677655
No 148
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=100.00 E-value=5.4e-37 Score=325.26 Aligned_cols=257 Identities=29% Similarity=0.471 Sum_probs=209.9
Q ss_pred HcCCCCCCcccccCCeeEEEEEeCC----CcEEEEEEeccCCh-hhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEE
Q 003158 510 TNNFNSSTQIGQGGYGKVYKGILPD----GTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQML 584 (843)
Q Consensus 510 ~~~~~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~l 584 (843)
.++|++.+.||+|+||+||+|.+.. ...||||.+..... ...+++.+|+.+++.++||||+++++++...+..++
T Consensus 3 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~i 82 (266)
T cd05033 3 PSYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMI 82 (266)
T ss_pred hHHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceEE
Confidence 3578899999999999999999742 45899999875433 335678999999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCC
Q 003158 585 VYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPV 664 (843)
Q Consensus 585 V~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~ 664 (843)
||||+++++|.+++.... ..+++..++.++.|++.||+|||+++ |+||||||+||++++++.++|+|||+++....
T Consensus 83 v~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~Lh~~~---i~H~di~p~nili~~~~~~~l~dfg~~~~~~~ 158 (266)
T cd05033 83 ITEYMENGSLDKFLREND-GKFTVGQLVGMLRGIASGMKYLSEMN---YVHRDLAARNILVNSNLVCKVSDFGLSRRLED 158 (266)
T ss_pred EEEcCCCCCHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCcceEEEcCCCCEEECccchhhcccc
Confidence 999999999999997643 36889999999999999999999998 99999999999999999999999999987642
Q ss_pred CCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHh-CCCCCCCCcchHHHHHHHhhcccchhhcc
Q 003158 665 PDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVID 743 (843)
Q Consensus 665 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 743 (843)
.+. ........++..|+|||.+.+..++.++||||||+++|||++ |..||....... ... .+..
T Consensus 159 ~~~-----~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~~--~~~--------~~~~ 223 (266)
T cd05033 159 SEA-----TYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQD--VIK--------AVED 223 (266)
T ss_pred ccc-----ceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHHH--HHH--------HHHc
Confidence 211 111122335678999999999999999999999999999998 999986543221 111 1111
Q ss_pred CCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHh
Q 003158 744 GNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 785 (843)
Q Consensus 744 ~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~ 785 (843)
....+.+..+++.+.+++.+||+.+|++||++.++++.|+++
T Consensus 224 ~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~~ 265 (266)
T cd05033 224 GYRLPPPMDCPSALYQLMLDCWQKDRNERPTFSQIVSTLDKM 265 (266)
T ss_pred CCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 222233455678899999999999999999999999998864
No 149
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=100.00 E-value=9.2e-38 Score=341.85 Aligned_cols=202 Identities=28% Similarity=0.344 Sum_probs=172.4
Q ss_pred cCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCC---hhhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEE
Q 003158 511 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 586 (843)
Q Consensus 511 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~ 586 (843)
++|++.+.||+|+||+||++... +++.||+|++.... ....+.+.+|+.+++.++|+||+++++++.+++..++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVM 80 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEE
Confidence 47889999999999999999964 68999999987421 223456888999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCC
Q 003158 587 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 666 (843)
Q Consensus 587 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~ 666 (843)
||+++|+|.+++... ...+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||++.......
T Consensus 81 e~~~g~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~ 156 (331)
T cd05597 81 DYYVGGDLLTLLSKF-EDRLPEDMARFYLAEMVLAIDSVHQLG---YVHRDIKPDNVLLDKNGHIRLADFGSCLRLLADG 156 (331)
T ss_pred ecCCCCcHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCC---eEECCCCHHHEEECCCCCEEEEECCceeecCCCC
Confidence 999999999999653 335888899999999999999999999 9999999999999999999999999987543221
Q ss_pred CCCcccceeeeeecccCCccCchhccc-----CCCCchhhhHHHHHHHHHHHhCCCCCCCC
Q 003158 667 IEGIVPAHVSTVVKGTPGYLDPEYFLT-----HKLTDKSDVYSLGVVFLELLTGMQPISHG 722 (843)
Q Consensus 667 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~sDvwS~G~~l~elltg~~pf~~~ 722 (843)
........||+.|+|||++.. ..++.++|||||||++|||++|+.||...
T Consensus 157 ------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~ 211 (331)
T cd05597 157 ------TVQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAE 211 (331)
T ss_pred ------CccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCC
Confidence 111223468999999999973 45788999999999999999999999754
No 150
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=100.00 E-value=7.4e-38 Score=341.91 Aligned_cols=240 Identities=23% Similarity=0.313 Sum_probs=185.4
Q ss_pred CcccccCCeeEEEEEeC-CCcEEEEEEeccCCh---hhHHHHHHHHH-HHHhccCCcccceeeeeecCCcEEEEEecCCC
Q 003158 517 TQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQ-FLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSN 591 (843)
Q Consensus 517 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~-~l~~l~h~nIv~l~~~~~~~~~~~lV~e~~~~ 591 (843)
+.||+|+||+||+|+.. +++.||+|++..... .....+..|.. +++.++|+||+++++++...+..++||||+++
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYING 80 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCC
Confidence 36999999999999965 678999999875321 22234445544 56788999999999999999999999999999
Q ss_pred CCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCCCCcc
Q 003158 592 GTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIV 671 (843)
Q Consensus 592 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~ 671 (843)
|+|.+++.... .+.+..+..++.||++||+|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 81 ~~L~~~~~~~~--~~~~~~~~~~~~qi~~~L~~lH~~g---iiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~----- 150 (325)
T cd05602 81 GELFYHLQRER--CFLEPRARFYAAEIASALGYLHSLN---IVYRDLKPENILLDSQGHIVLTDFGLCKENIEHN----- 150 (325)
T ss_pred CcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHeEECCCCCEEEccCCCCcccccCC-----
Confidence 99999996543 4778888889999999999999999 9999999999999999999999999987532211
Q ss_pred cceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhccCCCCCCCH
Q 003158 672 PAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPS 751 (843)
Q Consensus 672 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 751 (843)
.......||+.|+|||++.+..++.++||||+||++|||++|+.||...... +..... ... ....+.
T Consensus 151 --~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-~~~~~i---------~~~-~~~~~~ 217 (325)
T cd05602 151 --GTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTA-EMYDNI---------LNK-PLQLKP 217 (325)
T ss_pred --CCcccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHH-HHHHHH---------HhC-CcCCCC
Confidence 1223456999999999999999999999999999999999999999754421 111111 111 111223
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCHHHHH
Q 003158 752 ECVEKFIKLALKCCQDETDARPSMSEVM 779 (843)
Q Consensus 752 ~~~~~l~~l~~~c~~~~p~~RPs~~~vl 779 (843)
..+..+.+++.+|++.+|.+||+..+.+
T Consensus 218 ~~~~~~~~li~~~l~~~p~~R~~~~~~~ 245 (325)
T cd05602 218 NITNSARHLLEGLLQKDRTKRLGAKDDF 245 (325)
T ss_pred CCCHHHHHHHHHHcccCHHHCCCCCCCH
Confidence 3455666777777777777777766433
No 151
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6e-37 Score=317.65 Aligned_cols=261 Identities=23% Similarity=0.370 Sum_probs=202.8
Q ss_pred HcCCCCCCcccccCCeeEEEEEeCCCcEEEEEEeccCChhhHHHHHHHHHHHHhc--cCCcccceeeeeecC----CcEE
Q 003158 510 TNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRL--HHRNLVSLVGYCDEE----GEQM 583 (843)
Q Consensus 510 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l--~h~nIv~l~~~~~~~----~~~~ 583 (843)
..+....+.||+|.||.||+|.| .|+.||||++.. .+++.+.+|.++++.+ +|+||+.|++.-..+ .++|
T Consensus 210 arqI~L~e~IGkGRyGEVwrG~w-rGe~VAVKiF~s---rdE~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQLw 285 (513)
T KOG2052|consen 210 ARQIVLQEIIGKGRFGEVWRGRW-RGEDVAVKIFSS---RDERSWFRETEIYQTVMLRHENILGFIAADNKDNGSWTQLW 285 (513)
T ss_pred hheeEEEEEecCccccceeeccc-cCCceEEEEecc---cchhhhhhHHHHHHHHHhccchhhhhhhccccCCCceEEEE
Confidence 35667789999999999999999 588999999964 3456778888888874 999999999986443 3789
Q ss_pred EEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhc-----CCCCCEEeccCCCCcEEEcCCCcEEEeeccc
Q 003158 584 LVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHT-----EADPPVFHRDIKASNILLDHKFTAKVADFGL 658 (843)
Q Consensus 584 lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~-----~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGl 658 (843)
||++|.+.|||+|||.+ ..++....++++..+|.||++||. +|+|.|.|||||+.||||.+++...|+|+|+
T Consensus 286 LvTdYHe~GSL~DyL~r---~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IADLGL 362 (513)
T KOG2052|consen 286 LVTDYHEHGSLYDYLNR---NTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGL 362 (513)
T ss_pred EeeecccCCcHHHHHhh---ccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEeecee
Confidence 99999999999999965 468899999999999999999995 5889999999999999999999999999999
Q ss_pred cccCCCCCCCCcccceeeeeecccCCccCchhcccCC----C--CchhhhHHHHHHHHHHHhC----------CCCCCCC
Q 003158 659 SRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHK----L--TDKSDVYSLGVVFLELLTG----------MQPISHG 722 (843)
Q Consensus 659 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~--~~~sDvwS~G~~l~elltg----------~~pf~~~ 722 (843)
|........ .. .......+||.+|||||++...- + -..+||||||.++||+.-+ +.||.+.
T Consensus 363 Av~h~~~t~--~i-di~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~ 439 (513)
T KOG2052|consen 363 AVRHDSDTD--TI-DIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYDV 439 (513)
T ss_pred eEEecccCC--cc-cCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccC
Confidence 987654321 11 12234567999999999996532 1 2368999999999999764 3466532
Q ss_pred ---cchHHHHHHHhhcccchhhccCCCCCC-----CHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhh
Q 003158 723 ---KNIVREVNIAYQSSMMFSVIDGNMGSY-----PSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWN 787 (843)
Q Consensus 723 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~ 787 (843)
+...++.+..+- ++..++.+ ..++...+.++|..||..+|..|-++-.+.+.+.++.+
T Consensus 440 Vp~DPs~eeMrkVVC-------v~~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltALriKKtl~~l~~ 505 (513)
T KOG2052|consen 440 VPSDPSFEEMRKVVC-------VQKLRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTALRIKKTLAKLSN 505 (513)
T ss_pred CCCCCCHHHHhccee-------ecccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHHHHHHHHHHHHhc
Confidence 222222222111 12222222 45677889999999999999999999988888887754
No 152
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=100.00 E-value=1.4e-37 Score=340.13 Aligned_cols=206 Identities=22% Similarity=0.247 Sum_probs=168.4
Q ss_pred CCCccccc--CCeeEEEEEe-CCCcEEEEEEeccCC--hhhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEEecC
Q 003158 515 SSTQIGQG--GYGKVYKGIL-PDGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFM 589 (843)
Q Consensus 515 ~~~~lg~G--~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e~~ 589 (843)
+.++||+| +||+||++.. .+|+.||+|++.... ....+.+.+|+++++.++||||+++++++..++..++||||+
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~ 81 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFM 81 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEecc
Confidence 45789999 7889999986 479999999987543 223456788999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCCCC
Q 003158 590 SNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEG 669 (843)
Q Consensus 590 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~ 669 (843)
++|+|.+++.......+++..++.++.|++.||+|||+++ |+||||||+||+++.++.++++||+.+..........
T Consensus 82 ~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~---iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~~~ 158 (327)
T cd08227 82 AYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMG---YVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQRL 158 (327)
T ss_pred CCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCChhhEEEecCCcEEEcccchhhccccccccc
Confidence 9999999997655556889999999999999999999999 9999999999999999999999998754432111000
Q ss_pred cccceeeeeecccCCccCchhccc--CCCCchhhhHHHHHHHHHHHhCCCCCCCCc
Q 003158 670 IVPAHVSTVVKGTPGYLDPEYFLT--HKLTDKSDVYSLGVVFLELLTGMQPISHGK 723 (843)
Q Consensus 670 ~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~sDvwS~G~~l~elltg~~pf~~~~ 723 (843)
...........++..|+|||++.+ ..++.++|||||||++|||++|+.||....
T Consensus 159 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~ 214 (327)
T cd08227 159 RVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMP 214 (327)
T ss_pred cccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcc
Confidence 000011122346778999999976 468899999999999999999999997543
No 153
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=100.00 E-value=1.3e-37 Score=336.25 Aligned_cols=283 Identities=23% Similarity=0.376 Sum_probs=207.7
Q ss_pred cCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCCh-hhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEEec
Q 003158 511 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 588 (843)
Q Consensus 511 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e~ 588 (843)
++|.+.+.||+|+||.||+|... +++.||+|.+..... .....+.+|+++++.++||||+++++++..++..++||||
T Consensus 6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e~ 85 (301)
T cd07873 6 ETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY 85 (301)
T ss_pred cceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEEec
Confidence 56888999999999999999965 688999999874332 2345678899999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCCC
Q 003158 589 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 668 (843)
Q Consensus 589 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 668 (843)
++ ++|.+++.... ..+++..++.++.|+++||+|||+.+ |+||||||+||++++++.+||+|||++.......
T Consensus 86 ~~-~~l~~~l~~~~-~~~~~~~~~~~~~qi~~aL~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~-- 158 (301)
T cd07873 86 LD-KDLKQYLDDCG-NSINMHNVKLFLFQLLRGLNYCHRRK---VLHRDLKPQNLLINERGELKLADFGLARAKSIPT-- 158 (301)
T ss_pred cc-cCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCCHHHEEECCCCcEEECcCcchhccCCCC--
Confidence 96 69999886543 35788999999999999999999999 9999999999999999999999999997543221
Q ss_pred CcccceeeeeecccCCccCchhccc-CCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhccCCCC
Q 003158 669 GIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMG 747 (843)
Q Consensus 669 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 747 (843)
.......+++.|+|||.+.+ ..++.++|||||||++|||++|+.||..... .++..... .. .+
T Consensus 159 -----~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~-~~~~~~~~------~~----~~ 222 (301)
T cd07873 159 -----KTYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTV-EEQLHFIF------RI----LG 222 (301)
T ss_pred -----CcccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHH------HH----cC
Confidence 11123356889999999876 4578899999999999999999999975442 22221111 00 01
Q ss_pred CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCCCCccCCCCCcccC
Q 003158 748 SYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSS 825 (843)
Q Consensus 748 ~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~sa~e~L~Hp~f~~ 825 (843)
......+..+......+....|..++.. + ....+..++...+++.+||+.||++|+|++|+|+||||..
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~---~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~h~~f~~ 291 (301)
T cd07873 223 TPTEETWPGILSNEEFKSYNYPKYRADC------L---HNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKHPYFHC 291 (301)
T ss_pred CCChhhchhhhccccccccccCcccccc------H---HhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhcCccccc
Confidence 1111111111110000000111111100 0 0112333455678999999999999999999999999965
No 154
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=100.00 E-value=3.8e-37 Score=325.29 Aligned_cols=255 Identities=27% Similarity=0.459 Sum_probs=209.7
Q ss_pred HHcCCCCCCcccccCCeeEEEEEeCCCcEEEEEEeccCChhhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEEec
Q 003158 509 ATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 588 (843)
Q Consensus 509 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e~ 588 (843)
..++|++.++||+|+||.||+|..++++.||+|.+..... ...++.+|+.++++++|+||+++++++. .+..++||||
T Consensus 4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~ 81 (260)
T cd05067 4 PRETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGSM-SPEAFLAEANLMKQLQHPRLVRLYAVVT-QEPIYIITEY 81 (260)
T ss_pred chHHceeeeeeccCccceEEeeecCCCceEEEEEecCCCC-cHHHHHHHHHHHHhcCCcCeeeEEEEEc-cCCcEEEEEc
Confidence 4567889999999999999999988899999999875433 3467899999999999999999999874 4578999999
Q ss_pred CCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCCC
Q 003158 589 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 668 (843)
Q Consensus 589 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 668 (843)
+++++|.+++.......+++..+..++.|++.||+|||+.+ ++||||||+||++++++.++|+|||++........
T Consensus 82 ~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~---i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~- 157 (260)
T cd05067 82 MENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKN---YIHRDLRAANILVSETLCCKIADFGLARLIEDNEY- 157 (260)
T ss_pred CCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCC---eecccccHHhEEEcCCCCEEEccCcceeecCCCCc-
Confidence 99999999997766667899999999999999999999998 99999999999999999999999999976542211
Q ss_pred CcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHh-CCCCCCCCcchHHHHHHHhhcccchhhccCCCC
Q 003158 669 GIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGNMG 747 (843)
Q Consensus 669 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 747 (843)
.......++..|+|||++.+..++.++||||||+++||+++ |+.||...... +.... +......
T Consensus 158 -----~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~-~~~~~---------~~~~~~~ 222 (260)
T cd05067 158 -----TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNP-EVIQN---------LERGYRM 222 (260)
T ss_pred -----ccccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChH-HHHHH---------HHcCCCC
Confidence 11122345678999999998889999999999999999999 99999754421 11111 1111112
Q ss_pred CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 003158 748 SYPSECVEKFIKLALKCCQDETDARPSMSEVMRELES 784 (843)
Q Consensus 748 ~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~ 784 (843)
..+...+.++.+++.+||..+|++||+++++...|+.
T Consensus 223 ~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 259 (260)
T cd05067 223 PRPDNCPEELYELMRLCWKEKPEERPTFEYLRSVLED 259 (260)
T ss_pred CCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHhhc
Confidence 2344556789999999999999999999999998875
No 155
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=100.00 E-value=1.2e-37 Score=339.62 Aligned_cols=237 Identities=25% Similarity=0.353 Sum_probs=187.2
Q ss_pred CcccccCCeeEEEEEeC-CCcEEEEEEeccCCh---hhHHHHHHHHH-HHHhccCCcccceeeeeecCCcEEEEEecCCC
Q 003158 517 TQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQ-FLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSN 591 (843)
Q Consensus 517 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~-~l~~l~h~nIv~l~~~~~~~~~~~lV~e~~~~ 591 (843)
+.||+|+||.||+|+.. +++.||+|++..... .....+.+|.. +++.++||||+++++++.+.+..++||||+++
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNG 80 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999965 689999999875322 22344555654 67889999999999999999999999999999
Q ss_pred CCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCCCCcc
Q 003158 592 GTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIV 671 (843)
Q Consensus 592 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~ 671 (843)
|+|.+++... ..+++..+..++.||++||.|||+.+ |+||||||+||+++.++.+||+|||+++......
T Consensus 81 ~~L~~~l~~~--~~~~~~~~~~~~~qi~~~L~~lH~~~---ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~----- 150 (321)
T cd05603 81 GELFFHLQRE--RCFLEPRARFYAAEVASAIGYLHSLN---IIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPE----- 150 (321)
T ss_pred CCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCCHHHeEECCCCCEEEccCCCCccCCCCC-----
Confidence 9999988653 34778888899999999999999998 9999999999999999999999999987532211
Q ss_pred cceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhccCCCCCCCH
Q 003158 672 PAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPS 751 (843)
Q Consensus 672 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 751 (843)
.......||+.|+|||.+.+..++.++|||||||++|||++|+.||...+. ...... +. ......|.
T Consensus 151 --~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~-~~~~~~---------i~-~~~~~~~~ 217 (321)
T cd05603 151 --ETTSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDV-SQMYDN---------IL-HKPLQLPG 217 (321)
T ss_pred --CccccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCH-HHHHHH---------Hh-cCCCCCCC
Confidence 112345689999999999999999999999999999999999999976532 111111 11 11123344
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCHH
Q 003158 752 ECVEKFIKLALKCCQDETDARPSMS 776 (843)
Q Consensus 752 ~~~~~l~~l~~~c~~~~p~~RPs~~ 776 (843)
.....+.+++..|++.+|.+||+..
T Consensus 218 ~~~~~~~~li~~~l~~~p~~R~~~~ 242 (321)
T cd05603 218 GKTVAACDLLVGLLHKDQRRRLGAK 242 (321)
T ss_pred CCCHHHHHHHHHHccCCHhhcCCCC
Confidence 4556677888888888888887653
No 156
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=100.00 E-value=5.4e-37 Score=329.27 Aligned_cols=260 Identities=28% Similarity=0.451 Sum_probs=207.8
Q ss_pred HHHcCCCCCCcccccCCeeEEEEEeC------CCcEEEEEEeccCC-hhhHHHHHHHHHHHHhccCCcccceeeeeecCC
Q 003158 508 LATNNFNSSTQIGQGGYGKVYKGILP------DGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEG 580 (843)
Q Consensus 508 ~~~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~ 580 (843)
...++|++.+.||+|+||.||+|..+ .+..||+|.+.... ......+.+|+.+++.++|+||+++++++.+.+
T Consensus 3 ~~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~ 82 (288)
T cd05061 3 VSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQ 82 (288)
T ss_pred ccHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCC
Confidence 45678999999999999999999753 24589999886443 233456888999999999999999999999999
Q ss_pred cEEEEEecCCCCCHHHHHhhcC--------CCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEE
Q 003158 581 EQMLVYEFMSNGTLRDQLSAKS--------KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAK 652 (843)
Q Consensus 581 ~~~lV~e~~~~gsL~~~l~~~~--------~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~k 652 (843)
..++||||+++|+|.+++.... .....+..+..++.|++.||.|||+++ |+||||||+||++++++.++
T Consensus 83 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~---i~H~dikp~nili~~~~~~~ 159 (288)
T cd05061 83 PTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKK---FVHRDLAARNCMVAHDFTVK 159 (288)
T ss_pred CcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCC---CcCCCCChheEEEcCCCcEE
Confidence 9999999999999999997532 123456778899999999999999998 99999999999999999999
Q ss_pred EeeccccccCCCCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHh-CCCCCCCCcchHHHHHH
Q 003158 653 VADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNI 731 (843)
Q Consensus 653 l~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~ellt-g~~pf~~~~~~~~~~~~ 731 (843)
|+|||+++....... ........++..|+|||.+.+..++.++|||||||++|||++ |..||..... .+...
T Consensus 160 L~Dfg~~~~~~~~~~-----~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~-~~~~~- 232 (288)
T cd05061 160 IGDFGMTRDIYETDY-----YRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSN-EQVLK- 232 (288)
T ss_pred ECcCCcccccccccc-----ccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCH-HHHHH-
Confidence 999999976543221 011122235678999999999899999999999999999999 7888865332 12111
Q ss_pred HhhcccchhhccCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHh
Q 003158 732 AYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 785 (843)
Q Consensus 732 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~ 785 (843)
.+.++.....+..++..+.+++.+|++.+|++||++.++++.+++.
T Consensus 233 --------~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~ 278 (288)
T cd05061 233 --------FVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDD 278 (288)
T ss_pred --------HHHcCCCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhh
Confidence 1222333344555678899999999999999999999999888764
No 157
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=100.00 E-value=4.7e-37 Score=333.00 Aligned_cols=284 Identities=21% Similarity=0.320 Sum_probs=208.1
Q ss_pred cCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCCh-hhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEEec
Q 003158 511 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 588 (843)
Q Consensus 511 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e~ 588 (843)
++|++.+.||+|+||.||++... ++..+|+|.+..... ....++.+|++++++++||||+++++++.+++..++||||
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey 80 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICMEH 80 (308)
T ss_pred CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEeec
Confidence 46889999999999999999964 688999999875422 2345688999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhc-CCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCC
Q 003158 589 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHT-EADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 667 (843)
Q Consensus 589 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~-~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~ 667 (843)
+++++|.++++.. ..+++..+..++.|+++||.|||+ .+ ++||||||+||++++++.+||+|||++......
T Consensus 81 ~~~~~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~-- 153 (308)
T cd06615 81 MDGGSLDQVLKKA--GRIPENILGKISIAVLRGLTYLREKHK---IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS-- 153 (308)
T ss_pred cCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhhCC---EEECCCChHHEEEecCCcEEEccCCCccccccc--
Confidence 9999999999764 457888999999999999999997 46 999999999999999999999999998754321
Q ss_pred CCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhccCC--
Q 003158 668 EGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGN-- 745 (843)
Q Consensus 668 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~-- 745 (843)
......|+..|+|||.+.+..++.++|||||||++|||++|+.||..... .. ....+... ........
T Consensus 154 -------~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~-~~-~~~~~~~~-~~~~~~~~~~ 223 (308)
T cd06615 154 -------MANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDA-KE-LEAMFGRP-VSEGEAKESH 223 (308)
T ss_pred -------ccccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcch-hh-HHHhhcCc-cccccccCCc
Confidence 11234688999999999888899999999999999999999999965432 11 11111100 00000000
Q ss_pred ----CCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCCCCccCCCCC
Q 003158 746 ----MGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHP 821 (843)
Q Consensus 746 ----~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~sa~e~L~Hp 821 (843)
....+........++...+....+...|.. ..+....+|+.+|+..||++|||++|+++||
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~ 288 (308)
T cd06615 224 RPVSGHPPDSPRPMAIFELLDYIVNEPPPKLPSG---------------AFSDEFQDFVDKCLKKNPKERADLKELTKHP 288 (308)
T ss_pred ccccCCCCCccchhhHHHHHHHHhcCCCccCcCc---------------ccCHHHHHHHHHHccCChhhCcCHHHHhcCh
Confidence 000000001111111111111111111100 0122355899999999999999999999999
Q ss_pred cccCC
Q 003158 822 YVSSD 826 (843)
Q Consensus 822 ~f~~~ 826 (843)
||...
T Consensus 289 ~~~~~ 293 (308)
T cd06615 289 FIKRA 293 (308)
T ss_pred hhhhc
Confidence 99763
No 158
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=100.00 E-value=5.4e-37 Score=333.88 Aligned_cols=258 Identities=26% Similarity=0.449 Sum_probs=206.6
Q ss_pred HcCCCCCCcccccCCeeEEEEEeC-CCc----EEEEEEeccCC-hhhHHHHHHHHHHHHhccCCcccceeeeeecCCcEE
Q 003158 510 TNNFNSSTQIGQGGYGKVYKGILP-DGT----VVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQM 583 (843)
Q Consensus 510 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~----~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~ 583 (843)
..+|++.+.||+|+||+||+|.+. +++ .||+|.++... ....+++.+|+.+++.++||||++++|+|... ..+
T Consensus 6 ~~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~-~~~ 84 (316)
T cd05108 6 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQ 84 (316)
T ss_pred hhhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-Cce
Confidence 457899999999999999999863 343 48999987543 33456889999999999999999999999764 578
Q ss_pred EEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCC
Q 003158 584 LVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAP 663 (843)
Q Consensus 584 lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~ 663 (843)
+|+||+++|+|.+++.... ..+++..++.++.||++||+|||+++ |+||||||+||++++++.+||+|||+++...
T Consensus 85 ~v~e~~~~g~l~~~l~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~~---iiH~dlkp~Nill~~~~~~kl~DfG~a~~~~ 160 (316)
T cd05108 85 LITQLMPFGCLLDYVREHK-DNIGSQYLLNWCVQIAKGMNYLEERR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLG 160 (316)
T ss_pred eeeecCCCCCHHHHHHhcc-ccCCHHHHHHHHHHHHHHHHHHHhcC---eeccccchhheEecCCCcEEEcccccccccc
Confidence 9999999999999997643 34788889999999999999999998 9999999999999999999999999998764
Q ss_pred CCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHh-CCCCCCCCcchHHHHHHHhhcccchhhc
Q 003158 664 VPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVI 742 (843)
Q Consensus 664 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 742 (843)
.... ........++..|+|||++.+..++.++|||||||++|||++ |+.||...... + ......
T Consensus 161 ~~~~-----~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~-~-~~~~~~-------- 225 (316)
T cd05108 161 ADEK-----EYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS-E-ISSILE-------- 225 (316)
T ss_pred CCCc-----ceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHH-H-HHHHHh--------
Confidence 3221 111122234678999999999999999999999999999998 99998754321 1 111111
Q ss_pred cCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhh
Q 003158 743 DGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWN 787 (843)
Q Consensus 743 ~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~ 787 (843)
.+.....+..+..++.+++..||..+|.+||++.+++..+..+..
T Consensus 226 ~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~~~ 270 (316)
T cd05108 226 KGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR 270 (316)
T ss_pred CCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHc
Confidence 111223344566788999999999999999999999999888754
No 159
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=3.5e-37 Score=329.89 Aligned_cols=256 Identities=26% Similarity=0.428 Sum_probs=207.4
Q ss_pred cCCCCCCcccccCCeeEEEEEeC------CCcEEEEEEeccCChh-hHHHHHHHHHHHHhccCCcccceeeeeecCCcEE
Q 003158 511 NNFNSSTQIGQGGYGKVYKGILP------DGTVVAVKRAQEGSLQ-GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQM 583 (843)
Q Consensus 511 ~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~ 583 (843)
.+|++.+.||+|+||+||+|... +++.||+|++...... ....+.+|+.+++.++||||+++++++.+.+..+
T Consensus 5 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~ 84 (283)
T cd05091 5 STVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPLS 84 (283)
T ss_pred HHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCceE
Confidence 34667789999999999999853 2578999999754333 2456889999999999999999999999999999
Q ss_pred EEEecCCCCCHHHHHhhcC--------------CCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCC
Q 003158 584 LVYEFMSNGTLRDQLSAKS--------------KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKF 649 (843)
Q Consensus 584 lV~e~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~ 649 (843)
+++||+++++|.+++.... ...+++..++.++.|++.||+|||+++ |+||||||+||++++++
T Consensus 85 ~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~g---i~H~dlkp~Nil~~~~~ 161 (283)
T cd05091 85 MIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHH---VVHKDLATRNVLVFDKL 161 (283)
T ss_pred EEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcC---ccccccchhheEecCCC
Confidence 9999999999999985321 234788889999999999999999999 99999999999999999
Q ss_pred cEEEeeccccccCCCCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHh-CCCCCCCCcchHHH
Q 003158 650 TAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVRE 728 (843)
Q Consensus 650 ~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~ellt-g~~pf~~~~~~~~~ 728 (843)
.+||+|||+++....... ........+++.|+|||.+.+..++.++|||||||++|||++ |..||..... .+.
T Consensus 162 ~~kl~Dfg~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~-~~~ 235 (283)
T cd05091 162 NVKISDLGLFREVYAADY-----YKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSN-QDV 235 (283)
T ss_pred ceEecccccccccccchh-----eeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCH-HHH
Confidence 999999999886542221 111223345778999999998889999999999999999998 8888865432 121
Q ss_pred HHHHhhcccchhhccCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 003158 729 VNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELES 784 (843)
Q Consensus 729 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~ 784 (843)
.. .+..+.....+.+++..+.+++..||+.+|.+||++.++++.|+.
T Consensus 236 ~~---------~i~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~~ 282 (283)
T cd05091 236 IE---------MIRNRQVLPCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSRLRT 282 (283)
T ss_pred HH---------HHHcCCcCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHhhC
Confidence 11 222333344566788889999999999999999999999998874
No 160
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=100.00 E-value=6e-37 Score=322.96 Aligned_cols=251 Identities=28% Similarity=0.458 Sum_probs=204.5
Q ss_pred cCCCCCCcccccCCeeEEEEEeCCCcEEEEEEeccCChhhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEEecCC
Q 003158 511 NNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMS 590 (843)
Q Consensus 511 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e~~~ 590 (843)
.+|++.+.||+|+||.||+|.++++..+|+|++..... ...++.+|+++++.++|+||+++++++...+..++||||++
T Consensus 4 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~ 82 (256)
T cd05059 4 SELTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREGAM-SEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYMA 82 (256)
T ss_pred HHcchhhhhccCCCceEEEeEecCCccEEEEEeccCCC-CHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEecCC
Confidence 35778899999999999999987778899999875332 34578889999999999999999999999999999999999
Q ss_pred CCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCCCCc
Q 003158 591 NGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGI 670 (843)
Q Consensus 591 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~ 670 (843)
+++|.+++..... .+++..++.++.|+++||+|||+.+ |+||||||+||++++++.+||+|||+++......
T Consensus 83 ~~~L~~~l~~~~~-~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~---- 154 (256)
T cd05059 83 NGCLLNYLRERKG-KLGTEWLLDMCSDVCEAMEYLESNG---FIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQ---- 154 (256)
T ss_pred CCCHHHHHHhccc-CCCHHHHHHHHHHHHHHHHHHHHCC---cccccccHhhEEECCCCcEEECCcccceeccccc----
Confidence 9999999976433 6889999999999999999999999 9999999999999999999999999987653211
Q ss_pred ccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHh-CCCCCCCCcchHHHHHHHhhcccchhhccCCCCCC
Q 003158 671 VPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSY 749 (843)
Q Consensus 671 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 749 (843)
........++..|+|||.+.+..++.++||||||+++|||++ |+.||....... .... +........
T Consensus 155 --~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~-~~~~---------~~~~~~~~~ 222 (256)
T cd05059 155 --YTSSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSE-VVES---------VSAGYRLYR 222 (256)
T ss_pred --ccccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHH-HHHH---------HHcCCcCCC
Confidence 001111223457999999999999999999999999999999 888886543321 1111 111112233
Q ss_pred CHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 003158 750 PSECVEKFIKLALKCCQDETDARPSMSEVMREL 782 (843)
Q Consensus 750 ~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L 782 (843)
+..++.++.+++.+||..+|++||++.++++.|
T Consensus 223 ~~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~l 255 (256)
T cd05059 223 PKLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQL 255 (256)
T ss_pred CCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHh
Confidence 445678899999999999999999999999875
No 161
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=100.00 E-value=7.9e-38 Score=342.55 Aligned_cols=234 Identities=23% Similarity=0.277 Sum_probs=177.8
Q ss_pred ccccCCeeEEEEEeC-CCcEEEEEEeccCChhh---HHHHHHHHHHHHhc---cCCcccceeeeeecCCcEEEEEecCCC
Q 003158 519 IGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQG---EKEFLTEIQFLSRL---HHRNLVSLVGYCDEEGEQMLVYEFMSN 591 (843)
Q Consensus 519 lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l---~h~nIv~l~~~~~~~~~~~lV~e~~~~ 591 (843)
||+|+||+||+|+.. +++.||||++....... ...+..|..++... +||||+++++++.+....++||||+++
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~ 80 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG 80 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence 799999999999965 68999999986432222 23445666776665 699999999999999999999999999
Q ss_pred CCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCCCCcc
Q 003158 592 GTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIV 671 (843)
Q Consensus 592 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~ 671 (843)
|+|.+++... ..+++..++.++.||++||+|||+++ |+||||||+|||++.++.+||+|||+++......
T Consensus 81 g~L~~~l~~~--~~~~~~~~~~~~~qil~al~~LH~~~---ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~----- 150 (330)
T cd05586 81 GELFWHLQKE--GRFSEDRAKFYIAELVLALEHLHKYD---IVYRDLKPENILLDATGHIALCDFGLSKANLTDN----- 150 (330)
T ss_pred ChHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCCHHHeEECCCCCEEEecCCcCcCCCCCC-----
Confidence 9999998654 35889999999999999999999999 9999999999999999999999999987532211
Q ss_pred cceeeeeecccCCccCchhcccC-CCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhccCCCCCCC
Q 003158 672 PAHVSTVVKGTPGYLDPEYFLTH-KLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYP 750 (843)
Q Consensus 672 ~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 750 (843)
.......||+.|+|||++.+. .++.++|||||||++|||++|+.||...... +.... +..+......
T Consensus 151 --~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~-~~~~~---------i~~~~~~~~~ 218 (330)
T cd05586 151 --KTTNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQ-QMYRN---------IAFGKVRFPK 218 (330)
T ss_pred --CCccCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHH-HHHHH---------HHcCCCCCCC
Confidence 112345689999999999764 4789999999999999999999999754321 11111 1111111111
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCC
Q 003158 751 SECVEKFIKLALKCCQDETDARPS 774 (843)
Q Consensus 751 ~~~~~~l~~l~~~c~~~~p~~RPs 774 (843)
....+.+.+++.+|+..+|.+||+
T Consensus 219 ~~~~~~~~~li~~~L~~~P~~R~~ 242 (330)
T cd05586 219 NVLSDEGRQFVKGLLNRNPQHRLG 242 (330)
T ss_pred ccCCHHHHHHHHHHcCCCHHHCCC
Confidence 123445556666666666666663
No 162
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=100.00 E-value=4.8e-39 Score=328.09 Aligned_cols=292 Identities=20% Similarity=0.274 Sum_probs=220.3
Q ss_pred HHHcCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCChhhHHHHHHHHHHHHhcc-C-C----cccceeeeeecCC
Q 003158 508 LATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLH-H-R----NLVSLVGYCDEEG 580 (843)
Q Consensus 508 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h-~----nIv~l~~~~~~~~ 580 (843)
..+++|.+...+|+|.||.|-.+.++ .+..||||+++.- ....+...-|+++++++. + | -++.+.+||...+
T Consensus 86 ~l~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V-~kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrg 164 (415)
T KOG0671|consen 86 ILTNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNV-DKYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRG 164 (415)
T ss_pred ccccceehhhhhcCCcccceEEEeecCCCceehHHHHHHH-HHHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccC
Confidence 34889999999999999999999865 4789999999842 223445677999999993 2 2 4788899999999
Q ss_pred cEEEEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcC-------------
Q 003158 581 EQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDH------------- 647 (843)
Q Consensus 581 ~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~------------- 647 (843)
+.|+|+|.+ |-|+.+++..++..+++...++.|+.|++++++|||+.+ ++|.||||+|||+.+
T Consensus 165 hiCivfell-G~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~k---l~HTDLKPENILfvss~~~~~~~~k~~~ 240 (415)
T KOG0671|consen 165 HICIVFELL-GLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDLK---LTHTDLKPENILFVSSEYFKTYNPKKKV 240 (415)
T ss_pred ceEEEEecc-ChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhcc---eeecCCChheEEEeccceEEEeccCCcc
Confidence 999999999 679999999988889999999999999999999999999 999999999999932
Q ss_pred -------CCcEEEeeccccccCCCCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCC
Q 003158 648 -------KFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPIS 720 (843)
Q Consensus 648 -------~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~ 720 (843)
+..++|+|||.|.+.... ...++.|..|+|||++.+-.++.++||||+||+|+|++||...|.
T Consensus 241 ~~~r~~ks~~I~vIDFGsAtf~~e~----------hs~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFq 310 (415)
T KOG0671|consen 241 CFIRPLKSTAIKVIDFGSATFDHEH----------HSTIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQ 310 (415)
T ss_pred ceeccCCCcceEEEecCCcceeccC----------cceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceecc
Confidence 335899999999875422 255678999999999999999999999999999999999999997
Q ss_pred CCcchHHHHHHHhhcccchhhccCCCCCCCHHHHHHHH---HHHHHhcc--cCCCCCCCHHHHHHH---HHHhhhhCCCC
Q 003158 721 HGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFI---KLALKCCQ--DETDARPSMSEVMRE---LESIWNMMPES 792 (843)
Q Consensus 721 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~---~l~~~c~~--~~p~~RPs~~~vl~~---L~~~~~~~~~~ 792 (843)
..++.+.. .++...++++|.....+.. -.-..+++ .....| .+..+.+. |..+......+
T Consensus 311 tHen~EHL-----------aMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~-~~k~v~~~ckpl~~~~~~~d~e 378 (415)
T KOG0671|consen 311 THENLEHL-----------AMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKG-KSKYVFEPCKPLKKYMLQDDLE 378 (415)
T ss_pred cCCcHHHH-----------HHHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccc-cchhhhcCCccHHHHhccCcHH
Confidence 66543321 1111223344544433220 01111222 112222 12222222 22222222333
Q ss_pred CCCCCccccCCCCCCCCCCCCCccCCCCCcccCC
Q 003158 793 DTKTPEFINSEHTSKEETPPSSSSMLKHPYVSSD 826 (843)
Q Consensus 793 ~~~~~dll~~~L~~dp~~R~sa~e~L~Hp~f~~~ 826 (843)
..++.|||++||.+||.+|+|+.|||.||||..-
T Consensus 379 ~~~LfDLl~~mL~fDP~~RiTl~EAL~HpFF~~~ 412 (415)
T KOG0671|consen 379 HVQLFDLLRRMLEFDPARRITLREALSHPFFARL 412 (415)
T ss_pred HhHHHHHHHHHHccCccccccHHHHhcCHHhhcC
Confidence 4556799999999999999999999999999763
No 163
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=100.00 E-value=6.4e-37 Score=323.64 Aligned_cols=257 Identities=30% Similarity=0.495 Sum_probs=212.1
Q ss_pred HHHcCCCCCCcccccCCeeEEEEEeCCCcEEEEEEeccCChhhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEEe
Q 003158 508 LATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 587 (843)
Q Consensus 508 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e 587 (843)
+..++|++.+.||+|+||.||+|..++++.||||.+.... ...+++.+|++++++++|+||+++++++......++|||
T Consensus 3 ~~~~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 81 (261)
T cd05034 3 IPRESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGT-MSPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTE 81 (261)
T ss_pred cchhheeeeeeeccCcceEEEEEEEcCCceEEEEEecCCc-cCHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEEe
Confidence 3467899999999999999999998888899999987533 345678999999999999999999999998899999999
Q ss_pred cCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCC
Q 003158 588 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 667 (843)
Q Consensus 588 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~ 667 (843)
|+++++|.+++.......+++..+..++.|++.|+.|||+.+ ++|+||||+||++++++.+||+|||.+........
T Consensus 82 ~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~~---i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~ 158 (261)
T cd05034 82 YMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRN---YIHRDLAARNILVGENLVCKIADFGLARLIEDDEY 158 (261)
T ss_pred ccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCcchheEEEcCCCCEEECccccceeccchhh
Confidence 999999999998765567899999999999999999999998 99999999999999999999999999876542110
Q ss_pred CCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHh-CCCCCCCCcchHHHHHHHhhcccchhhccCCC
Q 003158 668 EGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGNM 746 (843)
Q Consensus 668 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 746 (843)
.......++..|+|||.+.+..++.++||||+||++||+++ |+.||...... ..... +.....
T Consensus 159 ------~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~-~~~~~---------~~~~~~ 222 (261)
T cd05034 159 ------TAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNR-EVLEQ---------VERGYR 222 (261)
T ss_pred ------hhhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHH-HHHHH---------HHcCCC
Confidence 01112234568999999999899999999999999999999 99999654321 11111 111111
Q ss_pred CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 003158 747 GSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELES 784 (843)
Q Consensus 747 ~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~ 784 (843)
...+...+.++.+++.+|+..+|++||++.++.+.|+.
T Consensus 223 ~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~l~~ 260 (261)
T cd05034 223 MPRPPNCPEELYDLMLQCWDKDPEERPTFEYLQSFLED 260 (261)
T ss_pred CCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHhc
Confidence 22344456789999999999999999999999988875
No 164
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=100.00 E-value=8.5e-37 Score=322.60 Aligned_cols=254 Identities=30% Similarity=0.465 Sum_probs=207.3
Q ss_pred HcCCCCCCcccccCCeeEEEEEeCCCcEEEEEEeccCChhhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEEecC
Q 003158 510 TNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFM 589 (843)
Q Consensus 510 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e~~ 589 (843)
.++|.+.+.||+|++|.||+|...++..+|+|.+.... ...+.+.+|+++++.++|+|++++++++. .+..++||||+
T Consensus 5 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~ 82 (260)
T cd05069 5 RESLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGT-MMPEAFLQEAQIMKKLRHDKLVPLYAVVS-EEPIYIVTEFM 82 (260)
T ss_pred hHHeeeeeeecCcCCCeEEEEEEcCCceEEEEEcccCC-ccHHHHHHHHHHHHhCCCCCeeeEEEEEc-CCCcEEEEEcC
Confidence 35688889999999999999998777789999876533 23467889999999999999999999885 45689999999
Q ss_pred CCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCCCC
Q 003158 590 SNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEG 669 (843)
Q Consensus 590 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~ 669 (843)
++|+|.+++.......+++..+..++.|++.||.|||+.+ ++||||||+||++++++.++|+|||.+........
T Consensus 83 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~---i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~-- 157 (260)
T cd05069 83 GKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMN---YIHRDLRAANILVGDNLVCKIADFGLARLIEDNEY-- 157 (260)
T ss_pred CCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCC---EeecccCcceEEEcCCCeEEECCCccceEccCCcc--
Confidence 9999999997755556889999999999999999999998 99999999999999999999999999976543211
Q ss_pred cccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHh-CCCCCCCCcchHHHHHHHhhcccchhhccCCCCC
Q 003158 670 IVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGS 748 (843)
Q Consensus 670 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 748 (843)
.......++..|+|||...+..++.++|||||||++|||++ |+.||........ .. .........
T Consensus 158 ----~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~-~~---------~~~~~~~~~ 223 (260)
T cd05069 158 ----TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNREV-LE---------QVERGYRMP 223 (260)
T ss_pred ----cccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHH-HH---------HHHcCCCCC
Confidence 11112345678999999998899999999999999999999 8889875443211 11 111111223
Q ss_pred CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 003158 749 YPSECVEKFIKLALKCCQDETDARPSMSEVMRELES 784 (843)
Q Consensus 749 ~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~ 784 (843)
.+...+..+.+++.+||..+|.+||++.++.+.|++
T Consensus 224 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 259 (260)
T cd05069 224 CPQGCPESLHELMKLCWKKDPDERPTFEYIQSFLED 259 (260)
T ss_pred CCcccCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 345667889999999999999999999999998875
No 165
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=100.00 E-value=2.4e-37 Score=331.22 Aligned_cols=280 Identities=24% Similarity=0.398 Sum_probs=207.9
Q ss_pred CCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCChh--hHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEEec
Q 003158 512 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ--GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 588 (843)
Q Consensus 512 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e~ 588 (843)
+|+..+.||+|+||.||+|... +|+.||+|++...... ....+.+|+++++.++|+||+++++++.+.+..++|+||
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEY 80 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEec
Confidence 4788899999999999999965 6899999998753222 235678899999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCCC
Q 003158 589 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 668 (843)
Q Consensus 589 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 668 (843)
++ ++|.+++.... ..+++..++.++.||++||.|||+++ |+||||||+||+++.++.+||+|||+++......
T Consensus 81 ~~-~~l~~~~~~~~-~~~~~~~~~~~~~qi~~al~~LH~~~---i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~-- 153 (284)
T cd07839 81 CD-QDLKKYFDSCN-GDIDPEIVKSFMFQLLKGLAFCHSHN---VLHRDLKPQNLLINKNGELKLADFGLARAFGIPV-- 153 (284)
T ss_pred CC-CCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCCHHHEEEcCCCcEEECccchhhccCCCC--
Confidence 96 58888876532 45899999999999999999999999 9999999999999999999999999997653221
Q ss_pred CcccceeeeeecccCCccCchhcccC-CCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhccCCCC
Q 003158 669 GIVPAHVSTVVKGTPGYLDPEYFLTH-KLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMG 747 (843)
Q Consensus 669 ~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 747 (843)
.......++..|+|||.+.+. .++.++|||||||++|||+||..|+....+.......... . .+
T Consensus 154 -----~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~------~----~~ 218 (284)
T cd07839 154 -----RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFR------L----LG 218 (284)
T ss_pred -----CCcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHH------H----hC
Confidence 111234578899999998774 4789999999999999999999998765554333322111 0 11
Q ss_pred CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCCCCccCCCCCcc
Q 003158 748 SYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYV 823 (843)
Q Consensus 748 ~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~sa~e~L~Hp~f 823 (843)
..+......+.++... ...+...... .+....+.....+.+++++||..||++|||++|+++||||
T Consensus 219 ~~~~~~~~~~~~~~~~------~~~~~~~~~~----~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~h~~f 284 (284)
T cd07839 219 TPTEESWPGVSKLPDY------KPYPMYPATT----SLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQHPYF 284 (284)
T ss_pred CCChHHhHHhhhcccc------cccCCCCCcc----hhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhcCCCC
Confidence 1112222221111110 0011111000 0111223345566789999999999999999999999998
No 166
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00 E-value=5.9e-37 Score=351.22 Aligned_cols=255 Identities=22% Similarity=0.332 Sum_probs=208.0
Q ss_pred HHcCCCCCCcccccCCeeEEEEEe-CCCcEEEEEEeccCC--hhhHHHHHHHHHHHHhccCCcccceeeeeecCC-----
Q 003158 509 ATNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEG----- 580 (843)
Q Consensus 509 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~----- 580 (843)
..++|.+.+.||+|+||+||+|.. .+++.||||++.... ......+.+|+.++..++|+||+++++.+...+
T Consensus 30 ~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~~ 109 (496)
T PTZ00283 30 QAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNPE 109 (496)
T ss_pred cCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCcc
Confidence 356899999999999999999985 479999999987543 233457889999999999999999988774332
Q ss_pred ---cEEEEEecCCCCCHHHHHhhc--CCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEee
Q 003158 581 ---EQMLVYEFMSNGTLRDQLSAK--SKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVAD 655 (843)
Q Consensus 581 ---~~~lV~e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~D 655 (843)
..++||||+++|+|.+++..+ ....+++..+..++.|++.||.|||+.+ |+||||||+|||+++++.+||+|
T Consensus 110 ~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~---IiHrDLKP~NILl~~~~~vkL~D 186 (496)
T PTZ00283 110 NVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKH---MIHRDIKSANILLCSNGLVKLGD 186 (496)
T ss_pred cceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEEeCCCCEEEEe
Confidence 368999999999999999653 2346889999999999999999999998 99999999999999999999999
Q ss_pred ccccccCCCCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhc
Q 003158 656 FGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQS 735 (843)
Q Consensus 656 fGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~ 735 (843)
||+++....... ........||+.|+|||++.+..++.++|||||||++|||++|+.||..... .....
T Consensus 187 FGls~~~~~~~~-----~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~-~~~~~----- 255 (496)
T PTZ00283 187 FGFSKMYAATVS-----DDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENM-EEVMH----- 255 (496)
T ss_pred cccCeecccccc-----ccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCH-HHHHH-----
Confidence 999986543211 1122345699999999999999999999999999999999999999975432 22111
Q ss_pred ccchhhccCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 003158 736 SMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRE 781 (843)
Q Consensus 736 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~ 781 (843)
....+.....+..+++++.+++..||+.+|.+||++.++++.
T Consensus 256 ----~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~ 297 (496)
T PTZ00283 256 ----KTLAGRYDPLPPSISPEMQEIVTALLSSDPKRRPSSSKLLNM 297 (496)
T ss_pred ----HHhcCCCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHhC
Confidence 122233334556677889999999999999999999998764
No 167
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1.1e-36 Score=331.12 Aligned_cols=281 Identities=24% Similarity=0.444 Sum_probs=220.4
Q ss_pred HHHcCCCCCCcccccCCeeEEEEEeC--------CCcEEEEEEeccCC-hhhHHHHHHHHHHHHhc-cCCcccceeeeee
Q 003158 508 LATNNFNSSTQIGQGGYGKVYKGILP--------DGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRL-HHRNLVSLVGYCD 577 (843)
Q Consensus 508 ~~~~~~~~~~~lg~G~~g~Vy~~~~~--------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~ 577 (843)
...++|.+.+.||+|+||.||+|... ....||+|.+.... .....++.+|+++++.+ +||||+++++++.
T Consensus 9 ~~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~ 88 (314)
T cd05099 9 FPRDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCT 88 (314)
T ss_pred ccHHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEc
Confidence 34567888999999999999999742 24579999987533 23356788999999999 6999999999999
Q ss_pred cCCcEEEEEecCCCCCHHHHHhhcC--------------CCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcE
Q 003158 578 EEGEQMLVYEFMSNGTLRDQLSAKS--------------KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNI 643 (843)
Q Consensus 578 ~~~~~~lV~e~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NI 643 (843)
+.+..++||||+++|+|.+++.... ...+++..+..++.|++.||.|||+++ |+||||||+||
T Consensus 89 ~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~g---i~H~dlkp~Ni 165 (314)
T cd05099 89 QEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRR---CIHRDLAARNV 165 (314)
T ss_pred cCCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCC---eeeccccceeE
Confidence 9999999999999999999996532 235788899999999999999999998 99999999999
Q ss_pred EEcCCCcEEEeeccccccCCCCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHh-CCCCCCCC
Q 003158 644 LLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHG 722 (843)
Q Consensus 644 Ll~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~ellt-g~~pf~~~ 722 (843)
++++++.+||+|||.++.....+.. .......++..|+|||.+.+..++.++|||||||++|||++ |..||...
T Consensus 166 ll~~~~~~kL~Dfg~~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~ 240 (314)
T cd05099 166 LVTEDNVMKIADFGLARGVHDIDYY-----KKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGI 240 (314)
T ss_pred EEcCCCcEEEccccccccccccccc-----cccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCC
Confidence 9999999999999999865422111 11112234567999999999899999999999999999999 88888643
Q ss_pred cchHHHHHHHhhcccchhhccCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccC
Q 003158 723 KNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINS 802 (843)
Q Consensus 723 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~ 802 (843)
.. .+.... +..+.....+..++.++.+++.+||..+|++||++.++++.|+++.....+ ...++...
T Consensus 241 ~~-~~~~~~---------~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~~~~~---~~~~~~~~ 307 (314)
T cd05099 241 PV-EELFKL---------LREGHRMDKPSNCTHELYMLMRECWHAVPTQRPTFKQLVEALDKVLAAVSE---EYLDLSMP 307 (314)
T ss_pred CH-HHHHHH---------HHcCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHHhcC---CceeeEEe
Confidence 32 111111 111222234556677888999999999999999999999999998765433 33456667
Q ss_pred CCCCCCC
Q 003158 803 EHTSKEE 809 (843)
Q Consensus 803 ~L~~dp~ 809 (843)
+.+++|+
T Consensus 308 ~~~~~~~ 314 (314)
T cd05099 308 FEQYSPS 314 (314)
T ss_pred hhhcCCC
Confidence 7777763
No 168
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=100.00 E-value=2.8e-37 Score=331.02 Aligned_cols=282 Identities=24% Similarity=0.383 Sum_probs=210.2
Q ss_pred CCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCCh--hhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEEec
Q 003158 512 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 588 (843)
Q Consensus 512 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e~ 588 (843)
+|++.+.||+|+||.||+|... +|+.||+|++..... ...+.+.+|+.++++++|+||+++++++..+...++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~ 80 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEY 80 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEecc
Confidence 4788899999999999999964 689999999876442 2346789999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCCC
Q 003158 589 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 668 (843)
Q Consensus 589 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 668 (843)
+ +++|.+++.... .++++..++.++.||++||+|||+.+ ++|+||||+||++++++.++|+|||.+........
T Consensus 81 ~-~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~- 154 (286)
T cd07832 81 M-PSDLSEVLRDEE-RPLPEAQVKSYMRMLLKGVAYMHANG---IMHRDLKPANLLISADGVLKIADFGLARLFSEEEP- 154 (286)
T ss_pred c-CCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCcCHHHEEEcCCCcEEEeeeeecccccCCCC-
Confidence 9 999999986543 56899999999999999999999998 99999999999999999999999999986643221
Q ss_pred CcccceeeeeecccCCccCchhcccC-CCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhccCCCC
Q 003158 669 GIVPAHVSTVVKGTPGYLDPEYFLTH-KLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMG 747 (843)
Q Consensus 669 ~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 747 (843)
.......++..|+|||.+.+. .++.++||||+||++|||++|..||....+. ........ ...
T Consensus 155 -----~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~-~~~~~~~~----------~~~ 218 (286)
T cd07832 155 -----RLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDI-EQLAIVFR----------TLG 218 (286)
T ss_pred -----CccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHH-HHHHHHHH----------HcC
Confidence 112234688999999998764 4688999999999999999997777544332 21111110 001
Q ss_pred CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCCCCccCCCCCccc
Q 003158 748 SYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVS 824 (843)
Q Consensus 748 ~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~sa~e~L~Hp~f~ 824 (843)
......+..+.++....-...+..++.. +.+..++.+....+++.+||..||++|||++++|+||||.
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h~~~~ 286 (286)
T cd07832 219 TPNEETWPGLTSLPDYNKITFPESKPIP---------LEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRHPYFT 286 (286)
T ss_pred CCChHHHhhccCcchhhcccCCCCCcch---------HHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhCcCcC
Confidence 1111111111111100000011111111 1122344456667899999999999999999999999994
No 169
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=100.00 E-value=1e-36 Score=325.67 Aligned_cols=255 Identities=28% Similarity=0.479 Sum_probs=207.8
Q ss_pred cCCCCCCcccccCCeeEEEEEeC------CCcEEEEEEeccCChhhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEE
Q 003158 511 NNFNSSTQIGQGGYGKVYKGILP------DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQML 584 (843)
Q Consensus 511 ~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~l 584 (843)
.+|...++||+|+||.||++... ++..+|+|.+........+.+.+|+++++.++|+||+++++++.+.+..++
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 84 (280)
T cd05092 5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPLLM 84 (280)
T ss_pred HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCceEE
Confidence 45777899999999999999742 366899999887666666789999999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHhhcCC-------------CCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcE
Q 003158 585 VYEFMSNGTLRDQLSAKSK-------------EPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTA 651 (843)
Q Consensus 585 V~e~~~~gsL~~~l~~~~~-------------~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~ 651 (843)
||||+++|+|.+++..... ..+++..++.++.|++.|++|||+.+ ++||||||+||++++++.+
T Consensus 85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~---i~H~dlkp~nil~~~~~~~ 161 (280)
T cd05092 85 VFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLH---FVHRDLATRNCLVGQGLVV 161 (280)
T ss_pred EEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCC---eecccccHhhEEEcCCCCE
Confidence 9999999999999976432 34788999999999999999999999 9999999999999999999
Q ss_pred EEeeccccccCCCCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHh-CCCCCCCCcchHHHHH
Q 003158 652 KVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVN 730 (843)
Q Consensus 652 kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~ellt-g~~pf~~~~~~~~~~~ 730 (843)
||+|||++........ ........+++.|+|||.+.+..++.++|||||||++|||++ |+.||....... ...
T Consensus 162 kL~dfg~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~-~~~ 235 (280)
T cd05092 162 KIGDFGMSRDIYSTDY-----YRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTE-AIE 235 (280)
T ss_pred EECCCCceeEcCCCce-----eecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHHH-HHH
Confidence 9999999875432210 011122335678999999999999999999999999999998 899986543221 111
Q ss_pred HHhhcccchhhccCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 003158 731 IAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELE 783 (843)
Q Consensus 731 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~ 783 (843)
....+.....+..++..+.+++.+||+.+|.+||++.++.+.|+
T Consensus 236 ---------~~~~~~~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~ 279 (280)
T cd05092 236 ---------CITQGRELERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQ 279 (280)
T ss_pred ---------HHHcCccCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHh
Confidence 11222222334556778999999999999999999999998876
No 170
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.3e-38 Score=333.89 Aligned_cols=244 Identities=30% Similarity=0.480 Sum_probs=207.1
Q ss_pred CCCCCCcccccCCeeEEEEEe-CCCcEEEEEEeccCChh---hHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEEe
Q 003158 512 NFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQ---GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 587 (843)
Q Consensus 512 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e 587 (843)
.|..++.||.|+||.||-|+. .+.++||||++.....+ .-+++..|++.|++++|||++.+.|+|..+...|||||
T Consensus 27 lf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVME 106 (948)
T KOG0577|consen 27 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVME 106 (948)
T ss_pred HHHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHH
Confidence 455578899999999999995 57899999998754433 34678999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCC
Q 003158 588 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 667 (843)
Q Consensus 588 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~ 667 (843)
|| -|+-.|++.-. +.++.+.++..|+.+.++||+|||+.+ .||||||+.|||+++.|.|||+|||.|.....
T Consensus 107 YC-lGSAsDlleVh-kKplqEvEIAAi~~gaL~gLaYLHS~~---~IHRDiKAGNILLse~g~VKLaDFGSAsi~~P--- 178 (948)
T KOG0577|consen 107 YC-LGSASDLLEVH-KKPLQEVEIAAITHGALQGLAYLHSHN---RIHRDIKAGNILLSEPGLVKLADFGSASIMAP--- 178 (948)
T ss_pred HH-hccHHHHHHHH-hccchHHHHHHHHHHHHHHHHHHHHhh---HHhhhccccceEecCCCeeeeccccchhhcCc---
Confidence 99 57999988654 457999999999999999999999999 99999999999999999999999999987542
Q ss_pred CCcccceeeeeecccCCccCchhccc---CCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhccC
Q 003158 668 EGIVPAHVSTVVKGTPGYLDPEYFLT---HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDG 744 (843)
Q Consensus 668 ~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 744 (843)
....+|||.|||||++.. +.|+-++||||+|++..||..+++|++..+..... +.+...
T Consensus 179 --------AnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMSAL----------YHIAQN 240 (948)
T KOG0577|consen 179 --------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSAL----------YHIAQN 240 (948)
T ss_pred --------hhcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHHHHH----------HHHHhc
Confidence 245689999999999963 78999999999999999999999998865543322 223333
Q ss_pred CCCCC-CHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 003158 745 NMGSY-PSECVEKFIKLALKCCQDETDARPSMSEVMRE 781 (843)
Q Consensus 745 ~~~~~-~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~ 781 (843)
..+.. ..++++.+..++..|+++-|.+||+..++++.
T Consensus 241 esPtLqs~eWS~~F~~Fvd~CLqKipqeRptse~ll~H 278 (948)
T KOG0577|consen 241 ESPTLQSNEWSDYFRNFVDSCLQKIPQERPTSEELLKH 278 (948)
T ss_pred CCCCCCCchhHHHHHHHHHHHHhhCcccCCcHHHHhhc
Confidence 33332 56788999999999999999999999988754
No 171
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=100.00 E-value=6.2e-37 Score=329.66 Aligned_cols=264 Identities=27% Similarity=0.489 Sum_probs=212.4
Q ss_pred HHHHHHcCCCCCCcccccCCeeEEEEEeC------CCcEEEEEEeccCC-hhhHHHHHHHHHHHHhc-cCCcccceeeee
Q 003158 505 EMALATNNFNSSTQIGQGGYGKVYKGILP------DGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRL-HHRNLVSLVGYC 576 (843)
Q Consensus 505 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~ 576 (843)
++....++|+..+.||+|+||.||+|... ....+|+|.+.... .....++.+|+++++++ +|+||+++++++
T Consensus 6 ~~~~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~ 85 (293)
T cd05053 6 EWELPRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVC 85 (293)
T ss_pred ccccCHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEE
Confidence 34455678999999999999999999864 23689999987532 23345788999999999 799999999999
Q ss_pred ecCCcEEEEEecCCCCCHHHHHhhc--------------CCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCc
Q 003158 577 DEEGEQMLVYEFMSNGTLRDQLSAK--------------SKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASN 642 (843)
Q Consensus 577 ~~~~~~~lV~e~~~~gsL~~~l~~~--------------~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~N 642 (843)
..++..++||||+++|+|.++++.. ....+++..++.++.|++.||+|||+.+ |+||||||+|
T Consensus 86 ~~~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~---ivH~dlkp~N 162 (293)
T cd05053 86 TQEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKK---CIHRDLAARN 162 (293)
T ss_pred cCCCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCC---ccccccceee
Confidence 9999999999999999999999652 2346889999999999999999999998 9999999999
Q ss_pred EEEcCCCcEEEeeccccccCCCCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHh-CCCCCCC
Q 003158 643 ILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISH 721 (843)
Q Consensus 643 ILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~ellt-g~~pf~~ 721 (843)
|++++++.+||+|||+++........ .......++..|+|||++.+..++.++|||||||++|||++ |..||..
T Consensus 163 il~~~~~~~kL~Dfg~~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~ 237 (293)
T cd05053 163 VLVTEDHVMKIADFGLARDIHHIDYY-----RKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPG 237 (293)
T ss_pred EEEcCCCeEEeCccccccccccccce-----eccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCC
Confidence 99999999999999999876432211 11122235678999999998899999999999999999998 9899865
Q ss_pred CcchHHHHHHHhhcccchhhccCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhh
Q 003158 722 GKNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIW 786 (843)
Q Consensus 722 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~ 786 (843)
... .+... .+..+.....+..++..+.+++.+||+.+|++||++.++++.|+++.
T Consensus 238 ~~~-~~~~~---------~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~~~ 292 (293)
T cd05053 238 IPV-EELFK---------LLKEGYRMEKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDRML 292 (293)
T ss_pred CCH-HHHHH---------HHHcCCcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHHHHhh
Confidence 432 11111 11112222345566778999999999999999999999999998763
No 172
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=100.00 E-value=1.6e-36 Score=319.46 Aligned_cols=249 Identities=26% Similarity=0.440 Sum_probs=202.3
Q ss_pred CCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccC--ChhhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEEec
Q 003158 512 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEG--SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 588 (843)
Q Consensus 512 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e~ 588 (843)
+|+..+.||+|++|.||+|... +++.|++|.+... .....+++.+|+++++.++||||+++++++.+.+..++||||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEY 80 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEe
Confidence 4777889999999999999965 6899999998643 233456789999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCCC
Q 003158 589 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 668 (843)
Q Consensus 589 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 668 (843)
+++++|.+++.......+++..++.++.|++.||.|||+.+ ++|+||||+||++++++.++|+|||+++......
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~---i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~-- 155 (256)
T cd08529 81 AENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKK---ILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNT-- 155 (256)
T ss_pred CCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCcceEEEeCCCCEEEcccccceeccCcc--
Confidence 99999999998765567899999999999999999999998 9999999999999999999999999988654321
Q ss_pred CcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhccCCCCC
Q 003158 669 GIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGS 748 (843)
Q Consensus 669 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 748 (843)
.......|++.|+|||+..+..++.++|||||||++|||++|+.||...... .... ....+....
T Consensus 156 -----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-~~~~---------~~~~~~~~~ 220 (256)
T cd08529 156 -----NFANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQG-ALIL---------KIIRGVFPP 220 (256)
T ss_pred -----chhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHH-HHHH---------HHHcCCCCC
Confidence 1122345788999999999999999999999999999999999999755421 1111 112222333
Q ss_pred CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 003158 749 YPSECVEKFIKLALKCCQDETDARPSMSEVMR 780 (843)
Q Consensus 749 ~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~ 780 (843)
.+..++..+.+++.+||+.+|++||++.++++
T Consensus 221 ~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~ 252 (256)
T cd08529 221 VSQMYSQQLAQLIDQCLTKDYRQRPDTFQLLR 252 (256)
T ss_pred CccccCHHHHHHHHHHccCCcccCcCHHHHhh
Confidence 44455667777777777777777777776654
No 173
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=100.00 E-value=6.7e-37 Score=327.96 Aligned_cols=279 Identities=27% Similarity=0.401 Sum_probs=204.9
Q ss_pred CCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCCh--hhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEEec
Q 003158 512 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 588 (843)
Q Consensus 512 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e~ 588 (843)
+|++.+.||+|++|.||+|... +++.||+|.+..... ...+.+.+|+.+++.++||||+++++++.+++..++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEF 80 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEec
Confidence 4778899999999999999965 689999999864322 2246788999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcC-CCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCC
Q 003158 589 MSNGTLRDQLSAKS-KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 667 (843)
Q Consensus 589 ~~~gsL~~~l~~~~-~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~ 667 (843)
++ ++|.+++.... ...+++..++.++.|+++||+|||+.+ |+||||||+||++++++.+||+|||++.......
T Consensus 81 ~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~- 155 (285)
T cd07861 81 LS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRR---VLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPV- 155 (285)
T ss_pred CC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCC---eeecCCCHHHEEEcCCCcEEECcccceeecCCCc-
Confidence 96 68999886543 256899999999999999999999998 9999999999999999999999999987543221
Q ss_pred CCcccceeeeeecccCCccCchhccc-CCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhccCCC
Q 003158 668 EGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNM 746 (843)
Q Consensus 668 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 746 (843)
.......+++.|+|||.+.+ ..++.++|||||||++|||+||+.||............ .. ..
T Consensus 156 ------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~-~~------~~---- 218 (285)
T cd07861 156 ------RVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRI-FR------IL---- 218 (285)
T ss_pred ------ccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH-HH------Hh----
Confidence 11223356889999999875 45788999999999999999999999765432221111 00 00
Q ss_pred CCCCHHHHHHHHHHHHHhcccCCC-CCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCCCCccCCCCCcc
Q 003158 747 GSYPSECVEKFIKLALKCCQDETD-ARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYV 823 (843)
Q Consensus 747 ~~~~~~~~~~l~~l~~~c~~~~p~-~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~sa~e~L~Hp~f 823 (843)
+......+.....+... -...+. ..+. ........+....+++++||..||++|||++|+++||||
T Consensus 219 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~----------~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~~~~~ 285 (285)
T cd07861 219 GTPTEDVWPGVTSLPDY-KNTFPKWKKGS----------LRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALNHPYF 285 (285)
T ss_pred CCCChhhhhcchhhHHH-HhhccccCcch----------hHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhcCCCC
Confidence 00111111111110000 000000 0000 001122234455689999999999999999999999998
No 174
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=100.00 E-value=8.2e-37 Score=328.40 Aligned_cols=282 Identities=23% Similarity=0.358 Sum_probs=206.6
Q ss_pred cCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCChh-hHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEEec
Q 003158 511 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ-GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 588 (843)
Q Consensus 511 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e~ 588 (843)
++|+..+.||+|++|.||+|..+ +++.||+|.+...... ....+.+|+++++.++|+||+++++++.+.+..++||||
T Consensus 5 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (291)
T cd07844 5 ETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVFEY 84 (291)
T ss_pred cceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEEec
Confidence 57888999999999999999965 6899999998753322 234567899999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCCC
Q 003158 589 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 668 (843)
Q Consensus 589 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 668 (843)
++ ++|.+++.... ..+++..++.++.|+++||.|||+.+ |+||||||+||++++++.+||+|||+++......
T Consensus 85 ~~-~~L~~~~~~~~-~~~~~~~~~~~~~ql~~al~~lH~~~---i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~-- 157 (291)
T cd07844 85 LD-TDLKQYMDDCG-GGLSMHNVRLFLFQLLRGLAYCHQRR---VLHRDLKPQNLLISERGELKLADFGLARAKSVPS-- 157 (291)
T ss_pred CC-CCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhCC---eecccCCHHHEEEcCCCCEEECccccccccCCCC--
Confidence 97 59999886543 36888999999999999999999998 9999999999999999999999999987543211
Q ss_pred CcccceeeeeecccCCccCchhccc-CCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhccCCCC
Q 003158 669 GIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMG 747 (843)
Q Consensus 669 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 747 (843)
.......++..|+|||.+.+ ..++.++||||+||++|||++|+.||.......+.+...+. . ..
T Consensus 158 -----~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~------~----~~ 222 (291)
T cd07844 158 -----KTYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFR------V----LG 222 (291)
T ss_pred -----ccccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHH------h----cC
Confidence 11122346788999999876 45889999999999999999999999765433333222111 0 11
Q ss_pred CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCCCC--CCCCccccCCCCCCCCCCCCCccCCCCCcc
Q 003158 748 SYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESD--TKTPEFINSEHTSKEETPPSSSSMLKHPYV 823 (843)
Q Consensus 748 ~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~--~~~~dll~~~L~~dp~~R~sa~e~L~Hp~f 823 (843)
....+...........+-...+...+ ..+ ....+... ....+++.+||..||++|||++|+++||||
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-------~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~~~~f 291 (291)
T cd07844 223 TPTEETWPGVSSNPEFKPYSFPFYPP--RPL-------INHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMKHPYF 291 (291)
T ss_pred CCChhhhhhhhhccccccccccccCC--hhH-------HHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhcCCCC
Confidence 11111121111110000000011111 111 11111222 455689999999999999999999999998
No 175
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=100.00 E-value=3.1e-36 Score=319.51 Aligned_cols=257 Identities=24% Similarity=0.363 Sum_probs=209.6
Q ss_pred cCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccC---ChhhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEE
Q 003158 511 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEG---SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 586 (843)
Q Consensus 511 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~ 586 (843)
++|++.+.||+|+||.||+|+.. +++.||||.+... .......+.+|+++++.++||||+++++++.+.+..++||
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVL 81 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEE
Confidence 47889999999999999999964 7899999987642 2233457889999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhc--CCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCC
Q 003158 587 EFMSNGTLRDQLSAK--SKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPV 664 (843)
Q Consensus 587 e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~ 664 (843)
||+++|+|.+++... ....+++..++.++.|+++||+|||+++ ++|+||||+||+++.++.++|+|||++.....
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~ 158 (267)
T cd08228 82 ELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRR---VMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred EecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCC---eeCCCCCHHHEEEcCCCCEEECccccceeccc
Confidence 999999999988642 2345788899999999999999999998 99999999999999999999999999886542
Q ss_pred CCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhccC
Q 003158 665 PDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDG 744 (843)
Q Consensus 665 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 744 (843)
.. .......|++.|+|||.+.+..++.++||||||+++|||++|+.||............. +...
T Consensus 159 ~~-------~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~~~~~~--------~~~~ 223 (267)
T cd08228 159 KT-------TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQK--------IEQC 223 (267)
T ss_pred hh-------HHHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccccHHHHHHH--------HhcC
Confidence 21 11123458889999999998889999999999999999999999996543221111111 1111
Q ss_pred CCCC-CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHh
Q 003158 745 NMGS-YPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 785 (843)
Q Consensus 745 ~~~~-~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~ 785 (843)
..+. .+...+..+.+++.+||..+|++||++.++++.++.+
T Consensus 224 ~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~~ 265 (267)
T cd08228 224 DYPPLPTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQM 265 (267)
T ss_pred CCCCCChhhcCHHHHHHHHHHCCCCcccCcCHHHHHHHHHHh
Confidence 1222 2345678899999999999999999999999998875
No 176
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-37 Score=336.30 Aligned_cols=252 Identities=27% Similarity=0.431 Sum_probs=212.5
Q ss_pred CCCCcccccCCeeEEEEEeC--CCc--EEEEEEeccCChh-hHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEEec
Q 003158 514 NSSTQIGQGGYGKVYKGILP--DGT--VVAVKRAQEGSLQ-GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 588 (843)
Q Consensus 514 ~~~~~lg~G~~g~Vy~~~~~--~~~--~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e~ 588 (843)
...++||+|.||.|++|.|. +|+ .||||.+..+... ...+|.+|+.+|.+++|+|+++|||+..+ ....+|||.
T Consensus 113 ~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~-qp~mMV~EL 191 (1039)
T KOG0199|consen 113 KLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLD-QPAMMVFEL 191 (1039)
T ss_pred HHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeecc-chhhHHhhh
Confidence 34578999999999999985 344 5899999876555 46799999999999999999999999987 788999999
Q ss_pred CCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCCC
Q 003158 589 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 668 (843)
Q Consensus 589 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 668 (843)
++.|+|.+.|++.....+.......++.|||.||.||.+++ +|||||.++|+|+-....|||+|||+.+-+...+..
T Consensus 192 aplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLeskr---lvHRDLAARNlllasprtVKI~DFGLmRaLg~ned~ 268 (1039)
T KOG0199|consen 192 APLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESKR---LVHRDLAARNLLLASPRTVKICDFGLMRALGENEDM 268 (1039)
T ss_pred cccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhhh---hhhhhhhhhhheecccceeeeecccceeccCCCCcc
Confidence 99999999998866677889999999999999999999999 999999999999999999999999999987654321
Q ss_pred CcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHh-CCCCCCCCcchHHHHHHHhhcccchhhccCCCC
Q 003158 669 GIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGNMG 747 (843)
Q Consensus 669 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 747 (843)
. .......-...|+|||.+....++.++|||+|||++||||| |..||.+... .+ .+..+-++.+.
T Consensus 269 Y----vm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g-~q---------IL~~iD~~erL 334 (1039)
T KOG0199|consen 269 Y----VMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRG-IQ---------ILKNIDAGERL 334 (1039)
T ss_pred e----EecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCH-HH---------HHHhccccccC
Confidence 1 11122334578999999999999999999999999999999 8889875442 11 12233345566
Q ss_pred CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 003158 748 SYPSECVEKFIKLALKCCQDETDARPSMSEVMRELE 783 (843)
Q Consensus 748 ~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~ 783 (843)
.-|..|++++++++..||..+|.+||+|..+.+.+-
T Consensus 335 pRPk~csedIY~imk~cWah~paDRptFsair~~~~ 370 (1039)
T KOG0199|consen 335 PRPKYCSEDIYQIMKNCWAHNPADRPTFSAIREDLV 370 (1039)
T ss_pred CCCCCChHHHHHHHHHhccCCccccccHHHHHHhHH
Confidence 778999999999999999999999999999974433
No 177
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=100.00 E-value=2e-36 Score=319.15 Aligned_cols=248 Identities=27% Similarity=0.415 Sum_probs=200.3
Q ss_pred cccccCCeeEEEEEeC---CCcEEEEEEeccCCh--hhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEEecCCCC
Q 003158 518 QIGQGGYGKVYKGILP---DGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNG 592 (843)
Q Consensus 518 ~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e~~~~g 592 (843)
.||+|+||+||+|.++ ++..||+|+++.... ...+++.+|+.+++.++|+||+++++++. .+..++||||+++|
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~lv~e~~~~~ 80 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICE-AESWMLVMELAELG 80 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEc-CCCcEEEEecCCCC
Confidence 5899999999999753 578999999875432 23567899999999999999999999886 45678999999999
Q ss_pred CHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCCCCccc
Q 003158 593 TLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVP 672 (843)
Q Consensus 593 sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~ 672 (843)
+|.+++... ..+++..+..++.|++.||+|||+++ |+||||||+||++++++.+||+|||+++........
T Consensus 81 ~L~~~l~~~--~~~~~~~~~~i~~qi~~al~~lH~~~---i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~---- 151 (257)
T cd05116 81 PLNKFLQKN--KHVTEKNITELVHQVSMGMKYLEETN---FVHRDLAARNVLLVTQHYAKISDFGLSKALGADENY---- 151 (257)
T ss_pred cHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccchhhEEEcCCCeEEECCCccccccCCCCCe----
Confidence 999999654 35889999999999999999999998 999999999999999999999999999865432210
Q ss_pred ceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHh-CCCCCCCCcchHHHHHHHhhcccchhhccCCCCCCCH
Q 003158 673 AHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPS 751 (843)
Q Consensus 673 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 751 (843)
........++..|+|||.+....++.++|||||||++|||++ |+.||..... ...... +..+...+.|.
T Consensus 152 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~-~~~~~~---------i~~~~~~~~~~ 221 (257)
T cd05116 152 YKAKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKG-NEVTQM---------IESGERMECPQ 221 (257)
T ss_pred eeecCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCH-HHHHHH---------HHCCCCCCCCC
Confidence 011122234578999999988889999999999999999998 9999975432 111111 11222334556
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHh
Q 003158 752 ECVEKFIKLALKCCQDETDARPSMSEVMRELESI 785 (843)
Q Consensus 752 ~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~ 785 (843)
.++.++.+++.+||+.+|++||++.+|.+.|+++
T Consensus 222 ~~~~~l~~li~~~~~~~p~~Rp~~~~i~~~l~~~ 255 (257)
T cd05116 222 RCPPEMYDLMKLCWTYGVDERPGFAVVELRLRNY 255 (257)
T ss_pred CCCHHHHHHHHHHhccCchhCcCHHHHHHHHhcc
Confidence 6778899999999999999999999999998865
No 178
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=100.00 E-value=2.5e-37 Score=338.69 Aligned_cols=203 Identities=28% Similarity=0.329 Sum_probs=172.1
Q ss_pred cCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCCh---hhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEE
Q 003158 511 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 586 (843)
Q Consensus 511 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~ 586 (843)
++|++.+.||+|+||+||+++.+ +++.||+|++..... .....+.+|+.++..++|++|+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVM 80 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEE
Confidence 46888999999999999999965 578999999864221 12345788999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCC
Q 003158 587 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 666 (843)
Q Consensus 587 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~ 666 (843)
||+++|+|.+++.+.. ..+++..++.++.||+.||+|||+++ |+||||||+|||++.++.+||+|||++.......
T Consensus 81 ey~~~g~L~~~l~~~~-~~l~~~~~~~~~~qi~~al~~lH~~~---iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~~ 156 (332)
T cd05623 81 DYYVGGDLLTLLSKFE-DRLPEDMARFYLAEMVIAIDSVHQLH---YVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDG 156 (332)
T ss_pred eccCCCcHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHEEECCCCCEEEeecchheecccCC
Confidence 9999999999997532 35888899999999999999999999 9999999999999999999999999987543211
Q ss_pred CCCcccceeeeeecccCCccCchhcc-----cCCCCchhhhHHHHHHHHHHHhCCCCCCCCc
Q 003158 667 IEGIVPAHVSTVVKGTPGYLDPEYFL-----THKLTDKSDVYSLGVVFLELLTGMQPISHGK 723 (843)
Q Consensus 667 ~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDvwS~G~~l~elltg~~pf~~~~ 723 (843)
........||+.|+|||++. ...++.++|||||||++|||++|+.||....
T Consensus 157 ------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~ 212 (332)
T cd05623 157 ------TVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAES 212 (332)
T ss_pred ------cceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCC
Confidence 11123356999999999986 3467889999999999999999999997543
No 179
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=100.00 E-value=2e-36 Score=326.39 Aligned_cols=258 Identities=27% Similarity=0.461 Sum_probs=206.9
Q ss_pred cCCCCCCcccccCCeeEEEEEeC-CC--cEEEEEEeccC-ChhhHHHHHHHHHHHHhc-cCCcccceeeeeecCCcEEEE
Q 003158 511 NNFNSSTQIGQGGYGKVYKGILP-DG--TVVAVKRAQEG-SLQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQMLV 585 (843)
Q Consensus 511 ~~~~~~~~lg~G~~g~Vy~~~~~-~~--~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~lV 585 (843)
++|++.+.||+|+||.||+|... ++ ..+++|.++.. .....+.+.+|+++++++ +||||+++++++...+..++|
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 81 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYIA 81 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceEE
Confidence 46888999999999999999865 33 35788888742 233456789999999999 799999999999999999999
Q ss_pred EecCCCCCHHHHHhhcC--------------CCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcE
Q 003158 586 YEFMSNGTLRDQLSAKS--------------KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTA 651 (843)
Q Consensus 586 ~e~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~ 651 (843)
|||+++|+|.+++.... ...+++..++.++.|++.||+|||+.+ |+||||||+||++++++.+
T Consensus 82 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~---ivH~dlkp~Nill~~~~~~ 158 (297)
T cd05089 82 IEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQ---FIHRDLAARNVLVGENLAS 158 (297)
T ss_pred EEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCcCCcceEEECCCCeE
Confidence 99999999999996532 124788899999999999999999998 9999999999999999999
Q ss_pred EEeeccccccCCCCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHh-CCCCCCCCcchHHHHH
Q 003158 652 KVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVN 730 (843)
Q Consensus 652 kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~ellt-g~~pf~~~~~~~~~~~ 730 (843)
||+|||++...... ........+..|+|||++.+..++.++|||||||++|||++ |..||..... .+...
T Consensus 159 kl~dfg~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~-~~~~~ 229 (297)
T cd05089 159 KIADFGLSRGEEVY--------VKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTC-AELYE 229 (297)
T ss_pred EECCcCCCccccce--------eccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCH-HHHHH
Confidence 99999998643211 00111223457999999998899999999999999999998 9999975432 11111
Q ss_pred HHhhcccchhhccCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhC
Q 003158 731 IAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMM 789 (843)
Q Consensus 731 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~ 789 (843)
....+.....+..++..+.+++.+||+.+|.+||++.++++.|+.+.+..
T Consensus 230 ---------~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~~~~ 279 (297)
T cd05089 230 ---------KLPQGYRMEKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQLSRMLEAR 279 (297)
T ss_pred ---------HHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhh
Confidence 11112222334556778999999999999999999999999999887643
No 180
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=100.00 E-value=1.1e-36 Score=326.15 Aligned_cols=279 Identities=27% Similarity=0.397 Sum_probs=208.3
Q ss_pred CCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCCh--hhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEEec
Q 003158 512 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 588 (843)
Q Consensus 512 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e~ 588 (843)
+|+..+.||+|++|.||+|+.. +++.||||.+..... ...+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF 80 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeec
Confidence 4788899999999999999965 689999998875332 2235788999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCCC
Q 003158 589 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 668 (843)
Q Consensus 589 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 668 (843)
+. ++|.+++.......+++..++.++.|+++||+|||+.+ ++||||+|+||++++++.+||+|||++.......
T Consensus 81 ~~-~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~---i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~-- 154 (284)
T cd07860 81 LH-QDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-- 154 (284)
T ss_pred cc-cCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEEeeccchhhcccCc--
Confidence 95 68999987766667899999999999999999999998 9999999999999999999999999987653221
Q ss_pred CcccceeeeeecccCCccCchhcccCC-CCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhccCCCC
Q 003158 669 GIVPAHVSTVVKGTPGYLDPEYFLTHK-LTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMG 747 (843)
Q Consensus 669 ~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 747 (843)
.......++..|+|||.+.+.. ++.++|||||||++|||+||+.||........ ....... .+
T Consensus 155 -----~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~-~~~~~~~----------~~ 218 (284)
T cd07860 155 -----RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQ-LFRIFRT----------LG 218 (284)
T ss_pred -----cccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHH-HHHHHHH----------hC
Confidence 1112334678999999987644 68899999999999999999999976543221 1111100 01
Q ss_pred CCCHHHHHHHHHHHHHhcccCCCC-CCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCCCCccCCCCCcc
Q 003158 748 SYPSECVEKFIKLALKCCQDETDA-RPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYV 823 (843)
Q Consensus 748 ~~~~~~~~~l~~l~~~c~~~~p~~-RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~sa~e~L~Hp~f 823 (843)
..+....+.+..+...+. ..|.. +....++ .+..+....+++.+|++.||++|||++|+++||||
T Consensus 219 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~----------~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~f 284 (284)
T cd07860 219 TPDEVVWPGVTSLPDYKP-SFPKWARQDFSKV----------VPPLDEDGRDLLSQMLHYDPNKRISAKAALAHPFF 284 (284)
T ss_pred CCChhhhhhhhHHHHHHh-hcccccccCHHHH----------cccCCHHHHHHHHHhcCCCcccCCCHHHHhcCCCC
Confidence 111222222222211111 11111 1111111 12233445689999999999999999999999998
No 181
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=100.00 E-value=3e-36 Score=321.95 Aligned_cols=257 Identities=26% Similarity=0.405 Sum_probs=203.6
Q ss_pred cCCCCCCcccccCCeeEEEEEeC-CCc----EEEEEEeccCCh-hhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEE
Q 003158 511 NNFNSSTQIGQGGYGKVYKGILP-DGT----VVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQML 584 (843)
Q Consensus 511 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~----~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~l 584 (843)
++|++.+.||+|+||+||+|.+. +++ .|++|.+..... ....++..|+.+++++.||||+++++++.. ...++
T Consensus 7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~-~~~~~ 85 (279)
T cd05111 7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICPG-ASLQL 85 (279)
T ss_pred hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEECC-CccEE
Confidence 46788899999999999999963 444 478888754322 234577888889999999999999999864 56789
Q ss_pred EEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCC
Q 003158 585 VYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPV 664 (843)
Q Consensus 585 V~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~ 664 (843)
|+||+++|+|.+++.... ..+++..++.++.||+.||+|||+++ ++||||||+||++++++.+||+|||+++....
T Consensus 86 i~e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~---iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~~ 161 (279)
T cd05111 86 VTQLSPLGSLLDHVRQHR-DSLDPQRLLNWCVQIAKGMYYLEEHR---MVHRNLAARNILLKSDSIVQIADFGVADLLYP 161 (279)
T ss_pred EEEeCCCCcHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHCC---EeccccCcceEEEcCCCcEEEcCCccceeccC
Confidence 999999999999997543 35889999999999999999999998 99999999999999999999999999986532
Q ss_pred CCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHh-CCCCCCCCcchHHHHHHHhhcccchhhcc
Q 003158 665 PDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVID 743 (843)
Q Consensus 665 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 743 (843)
.+. ........++..|+|||.+.+..++.++|||||||++||+++ |+.||....... ...... .
T Consensus 162 ~~~-----~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~--~~~~~~--------~ 226 (279)
T cd05111 162 DDK-----KYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHE--VPDLLE--------K 226 (279)
T ss_pred CCc-----ccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHH--HHHHHH--------C
Confidence 211 111233457788999999999999999999999999999998 999986543211 111111 1
Q ss_pred CCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhh
Q 003158 744 GNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWN 787 (843)
Q Consensus 744 ~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~ 787 (843)
+.....+..+...+.+++.+||..+|.+||++.++++.+..+.+
T Consensus 227 ~~~~~~~~~~~~~~~~li~~c~~~~p~~Rps~~el~~~l~~~~~ 270 (279)
T cd05111 227 GERLAQPQICTIDVYMVMVKCWMIDENVRPTFKELANEFTRMAR 270 (279)
T ss_pred CCcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHh
Confidence 11222334456678889999999999999999999999988764
No 182
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=100.00 E-value=2e-36 Score=322.90 Aligned_cols=257 Identities=28% Similarity=0.465 Sum_probs=205.9
Q ss_pred HHcCCCCCCcccccCCeeEEEEEeC------CCcEEEEEEeccCC-hhhHHHHHHHHHHHHhccCCcccceeeeeecCCc
Q 003158 509 ATNNFNSSTQIGQGGYGKVYKGILP------DGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGE 581 (843)
Q Consensus 509 ~~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~ 581 (843)
..++|.+.+.||+|+||.||+|.+. .+..||+|.+.... ...+..+.+|+.+++.++|+||+++++++.+.+.
T Consensus 4 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~ 83 (277)
T cd05036 4 PRDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLP 83 (277)
T ss_pred CHHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCC
Confidence 3567889999999999999999964 35789999887443 3335678999999999999999999999998899
Q ss_pred EEEEEecCCCCCHHHHHhhcCC-----CCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCC---cEEE
Q 003158 582 QMLVYEFMSNGTLRDQLSAKSK-----EPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKF---TAKV 653 (843)
Q Consensus 582 ~~lV~e~~~~gsL~~~l~~~~~-----~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~---~~kl 653 (843)
.++||||+++++|.+++..... ..+++..++.++.||+.||+|||+.+ ++||||||+||+++.++ .+||
T Consensus 84 ~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivH~dlkp~nil~~~~~~~~~~kl 160 (277)
T cd05036 84 RFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENH---FIHRDIAARNCLLTCKGPGRVAKI 160 (277)
T ss_pred cEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccchheEEEeccCCCcceEe
Confidence 9999999999999999976432 25889999999999999999999998 99999999999998765 6999
Q ss_pred eeccccccCCCCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHh-CCCCCCCCcchHHHHHHH
Q 003158 654 ADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIA 732 (843)
Q Consensus 654 ~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~ellt-g~~pf~~~~~~~~~~~~~ 732 (843)
+|||+++........ ........+..|+|||++.+..++.++|||||||++|||++ |+.||...... .....
T Consensus 161 ~dfg~~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~-~~~~~- 233 (277)
T cd05036 161 ADFGMARDIYRASYY-----RKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQ-EVMEF- 233 (277)
T ss_pred ccCccccccCCccce-----ecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHH-HHHHH-
Confidence 999999865322110 00112223567999999999999999999999999999997 99998754321 11111
Q ss_pred hhcccchhhccCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 003158 733 YQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELE 783 (843)
Q Consensus 733 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~ 783 (843)
+........+..++..+.+++.+|++.+|++||++.++++.|+
T Consensus 234 --------~~~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~ 276 (277)
T cd05036 234 --------VTGGGRLDPPKGCPGPVYRIMTDCWQHTPEDRPNFATILERIQ 276 (277)
T ss_pred --------HHcCCcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHhh
Confidence 1111222345566788999999999999999999999998875
No 183
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=100.00 E-value=2.8e-36 Score=336.23 Aligned_cols=265 Identities=22% Similarity=0.388 Sum_probs=210.8
Q ss_pred HHHHHHcCCCCCCcccccCCeeEEEEEeC------CCcEEEEEEeccCChhh-HHHHHHHHHHHHhcc-CCcccceeeee
Q 003158 505 EMALATNNFNSSTQIGQGGYGKVYKGILP------DGTVVAVKRAQEGSLQG-EKEFLTEIQFLSRLH-HRNLVSLVGYC 576 (843)
Q Consensus 505 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~-h~nIv~l~~~~ 576 (843)
++....++|.+.+.||+|+||.||+|+++ .++.||+|+++...... .+.+.+|++++.++. ||||++++++|
T Consensus 31 ~~~~~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~ 110 (401)
T cd05107 31 AWEMPRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGAC 110 (401)
T ss_pred cceecHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEE
Confidence 45566678888999999999999999853 34689999998543322 357889999999997 99999999999
Q ss_pred ecCCcEEEEEecCCCCCHHHHHhhcCC-----------------------------------------------------
Q 003158 577 DEEGEQMLVYEFMSNGTLRDQLSAKSK----------------------------------------------------- 603 (843)
Q Consensus 577 ~~~~~~~lV~e~~~~gsL~~~l~~~~~----------------------------------------------------- 603 (843)
...+..++||||+++|+|.+++++...
T Consensus 111 ~~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (401)
T cd05107 111 TKGGPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYV 190 (401)
T ss_pred ccCCCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCcc
Confidence 999999999999999999999965321
Q ss_pred -------------------------------------------CCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCC
Q 003158 604 -------------------------------------------EPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKA 640 (843)
Q Consensus 604 -------------------------------------------~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp 640 (843)
..+++..+..++.|++.||+|||+.+ |+||||||
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrdlkp 267 (401)
T cd05107 191 PMQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASKN---CVHRDLAA 267 (401)
T ss_pred chhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCC---cCcccCCc
Confidence 23567778899999999999999988 99999999
Q ss_pred CcEEEcCCCcEEEeeccccccCCCCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHh-CCCCC
Q 003158 641 SNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPI 719 (843)
Q Consensus 641 ~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~ellt-g~~pf 719 (843)
+|||+++++.+||+|||+++....... ........++..|+|||.+.+..++.++|||||||++|||++ |..||
T Consensus 268 ~NiLl~~~~~~kL~DfGla~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~ 342 (401)
T cd05107 268 RNVLICEGKLVKICDFGLARDIMRDSN-----YISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPY 342 (401)
T ss_pred ceEEEeCCCEEEEEecCcceecccccc-----cccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCC
Confidence 999999999999999999976432110 001122346788999999998889999999999999999998 88898
Q ss_pred CCCcchHHHHHHHhhcccchhhccCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhh
Q 003158 720 SHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIW 786 (843)
Q Consensus 720 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~ 786 (843)
............ +..+.....|..++.++.+++.+||..+|.+||++.++++.|+++.
T Consensus 343 ~~~~~~~~~~~~---------~~~~~~~~~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~L~~~~ 400 (401)
T cd05107 343 PELPMNEQFYNA---------IKRGYRMAKPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHLVGDLL 400 (401)
T ss_pred CCCCchHHHHHH---------HHcCCCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHh
Confidence 654322111111 1111122345556788999999999999999999999999998753
No 184
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=100.00 E-value=2.8e-36 Score=317.77 Aligned_cols=250 Identities=29% Similarity=0.470 Sum_probs=209.3
Q ss_pred HcCCCCCCcccccCCeeEEEEEeCCCcEEEEEEeccCChhhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEEecC
Q 003158 510 TNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFM 589 (843)
Q Consensus 510 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e~~ 589 (843)
.++|+..+.||+|+||.||+|... |+.||+|.+..... ..+++.+|+.+++.++|+||+++++++.+.+..++||||+
T Consensus 5 ~~~~~~~~~ig~g~~g~v~~~~~~-~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 82 (256)
T cd05039 5 SKELKLGATIGKGEFGDVMLGDYR-GQKVAVKCLKDDST-AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEYM 82 (256)
T ss_pred hhhccceeeeecCCCceEEEEEec-CcEEEEEEeccchh-HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEEec
Confidence 457888999999999999999874 78999999986544 5678999999999999999999999999899999999999
Q ss_pred CCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCCCC
Q 003158 590 SNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEG 669 (843)
Q Consensus 590 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~ 669 (843)
++++|.+++.......+++..++.++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||.++......
T Consensus 83 ~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~---i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~--- 156 (256)
T cd05039 83 AKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKN---FVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQ--- 156 (256)
T ss_pred CCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC---ccchhcccceEEEeCCCCEEEccccccccccccc---
Confidence 9999999998766557899999999999999999999999 9999999999999999999999999998653211
Q ss_pred cccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHh-CCCCCCCCcchHHHHHHHhhcccchhhccCCCCC
Q 003158 670 IVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGS 748 (843)
Q Consensus 670 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 748 (843)
.....+..|+|||.+.+..++.++||||||+++||+++ |..||..... .+ ..... .......
T Consensus 157 -------~~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~-~~-~~~~~--------~~~~~~~ 219 (256)
T cd05039 157 -------DSGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPL-KD-VVPHV--------EKGYRME 219 (256)
T ss_pred -------ccCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCH-HH-HHHHH--------hcCCCCC
Confidence 12234568999999998889999999999999999998 9999865432 11 11111 1111223
Q ss_pred CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 003158 749 YPSECVEKFIKLALKCCQDETDARPSMSEVMRELES 784 (843)
Q Consensus 749 ~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~ 784 (843)
.+..+++.+.+++.+|+..+|++||++.+++.+|+.
T Consensus 220 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 255 (256)
T cd05039 220 APEGCPPEVYKVMKDCWELDPAKRPTFKQLREQLAL 255 (256)
T ss_pred CccCCCHHHHHHHHHHhccChhhCcCHHHHHHHHhc
Confidence 345567889999999999999999999999999875
No 185
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=100.00 E-value=3e-36 Score=317.80 Aligned_cols=249 Identities=27% Similarity=0.447 Sum_probs=200.5
Q ss_pred cccccCCeeEEEEEeC---CCcEEEEEEeccCCh-hhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEEecCCCCC
Q 003158 518 QIGQGGYGKVYKGILP---DGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGT 593 (843)
Q Consensus 518 ~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e~~~~gs 593 (843)
.||+|+||.||+|.+. .+..||+|++..... ...+++.+|+.++++++|+||+++++++. ....++||||+++|+
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~-~~~~~lv~e~~~~~~ 80 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCE-AEALMLVMEMASGGP 80 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEc-CCCeEEEEEeCCCCC
Confidence 3899999999999864 356799999876433 23467899999999999999999999885 457899999999999
Q ss_pred HHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCCCCcccc
Q 003158 594 LRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPA 673 (843)
Q Consensus 594 L~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~ 673 (843)
|.+++... ...+++..++.++.|++.||+|||+++ ++||||||+||+++.++.+||+|||++......... .
T Consensus 81 L~~~l~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~----~ 152 (257)
T cd05115 81 LNKFLSGK-KDEITVSNVVELMHQVSMGMKYLEGKN---FVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSY----Y 152 (257)
T ss_pred HHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhcC---eeecccchheEEEcCCCcEEeccCCccccccCCccc----e
Confidence 99998653 346889999999999999999999998 999999999999999999999999999765432210 0
Q ss_pred eeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHh-CCCCCCCCcchHHHHHHHhhcccchhhccCCCCCCCHH
Q 003158 674 HVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSE 752 (843)
Q Consensus 674 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 752 (843)
.......++..|+|||.+.+..++.++|||||||++||+++ |..||...... +... .+..+.....+..
T Consensus 153 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~-~~~~---------~~~~~~~~~~~~~ 222 (257)
T cd05115 153 KARSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGP-EVMS---------FIEQGKRLDCPAE 222 (257)
T ss_pred eccCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHH-HHHH---------HHHCCCCCCCCCC
Confidence 11122234578999999998889999999999999999997 99999754421 1111 1122223345566
Q ss_pred HHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHh
Q 003158 753 CVEKFIKLALKCCQDETDARPSMSEVMRELESI 785 (843)
Q Consensus 753 ~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~ 785 (843)
+++++.+++.+||..+|++||++.++.+.|+.+
T Consensus 223 ~~~~l~~li~~c~~~~~~~Rp~~~~i~~~l~~~ 255 (257)
T cd05115 223 CPPEMYALMKDCWIYKWEDRPNFAKVEERMRTY 255 (257)
T ss_pred CCHHHHHHHHHHcCCChhhCcCHHHHHHHHhhh
Confidence 788999999999999999999999999998875
No 186
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=100.00 E-value=2.1e-36 Score=323.31 Aligned_cols=261 Identities=25% Similarity=0.398 Sum_probs=210.8
Q ss_pred HHcCCCCCCcccccCCeeEEEEEeCC-----CcEEEEEEeccCC-hhhHHHHHHHHHHHHhccCCcccceeeeeec-CCc
Q 003158 509 ATNNFNSSTQIGQGGYGKVYKGILPD-----GTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDE-EGE 581 (843)
Q Consensus 509 ~~~~~~~~~~lg~G~~g~Vy~~~~~~-----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~-~~~ 581 (843)
..++|++.+.||+|+||.||+|...+ +..||+|++.... ....+.+.+|+.+++.++|+||+++++++.. ...
T Consensus 4 ~~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~ 83 (280)
T cd05043 4 SRDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEP 83 (280)
T ss_pred chhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCC
Confidence 45788899999999999999999765 6889999987543 3335678899999999999999999998765 567
Q ss_pred EEEEEecCCCCCHHHHHhhcCC------CCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEee
Q 003158 582 QMLVYEFMSNGTLRDQLSAKSK------EPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVAD 655 (843)
Q Consensus 582 ~~lV~e~~~~gsL~~~l~~~~~------~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~D 655 (843)
.++++||+++|+|.+++..... ..+++..++.++.|++.||+|||+.+ ++||||||+||++++++.+||+|
T Consensus 84 ~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~---i~H~di~p~nil~~~~~~~kl~d 160 (280)
T cd05043 84 PFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRG---VIHKDIAARNCVIDEELQVKITD 160 (280)
T ss_pred CEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccCHhhEEEcCCCcEEECC
Confidence 8999999999999999965322 45889999999999999999999998 99999999999999999999999
Q ss_pred ccccccCCCCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHh-CCCCCCCCcchHHHHHHHhh
Q 003158 656 FGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQ 734 (843)
Q Consensus 656 fGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~ellt-g~~pf~~~~~~~~~~~~~~~ 734 (843)
||+++.+...+. ........++..|+|||++.+..++.++|||||||++||+++ |+.||..... .+....
T Consensus 161 ~g~~~~~~~~~~-----~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~-~~~~~~--- 231 (280)
T cd05043 161 NALSRDLFPMDY-----HCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDP-FEMAAY--- 231 (280)
T ss_pred CCCcccccCCce-----EEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCH-HHHHHH---
Confidence 999986533221 011122345678999999998889999999999999999999 9999975432 221111
Q ss_pred cccchhhccCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhh
Q 003158 735 SSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWN 787 (843)
Q Consensus 735 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~ 787 (843)
+..+.....+..+++.+.+++.+||..+|++||++.++++.|+++.+
T Consensus 232 ------~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~~~ 278 (280)
T cd05043 232 ------LKDGYRLAQPINCPDELFAVMACCWALDPEERPSFSQLVQCLTDFHA 278 (280)
T ss_pred ------HHcCCCCCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence 11111222334566788999999999999999999999999998764
No 187
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=100.00 E-value=9.6e-37 Score=325.30 Aligned_cols=257 Identities=28% Similarity=0.469 Sum_probs=209.2
Q ss_pred HHcCCCCCCcccccCCeeEEEEEeCC------CcEEEEEEeccCC-hhhHHHHHHHHHHHHhccCCcccceeeeeecCCc
Q 003158 509 ATNNFNSSTQIGQGGYGKVYKGILPD------GTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGE 581 (843)
Q Consensus 509 ~~~~~~~~~~lg~G~~g~Vy~~~~~~------~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~ 581 (843)
..++|++.+.||+|+||.||+|...+ +..||+|.+.... ......+.+|+.+++.++|+||+++++++.....
T Consensus 4 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~ 83 (277)
T cd05032 4 PREKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQP 83 (277)
T ss_pred chHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCCC
Confidence 45688899999999999999998642 4689999987543 2335678899999999999999999999999999
Q ss_pred EEEEEecCCCCCHHHHHhhcC--------CCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEE
Q 003158 582 QMLVYEFMSNGTLRDQLSAKS--------KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKV 653 (843)
Q Consensus 582 ~~lV~e~~~~gsL~~~l~~~~--------~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl 653 (843)
.++||||+++|+|.+++.... ...+++..++.++.|++.||.|||+.+ |+||||||+||++++++.+||
T Consensus 84 ~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~di~p~nill~~~~~~kl 160 (277)
T cd05032 84 TLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKK---FVHRDLAARNCMVAEDLTVKI 160 (277)
T ss_pred cEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCC---ccccccChheEEEcCCCCEEE
Confidence 999999999999999996532 124678889999999999999999998 999999999999999999999
Q ss_pred eeccccccCCCCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHh-CCCCCCCCcchHHHHHHH
Q 003158 654 ADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIA 732 (843)
Q Consensus 654 ~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~ellt-g~~pf~~~~~~~~~~~~~ 732 (843)
+|||+++.....+.. .......++..|+|||.+.+..++.++|||||||++||+++ |..||..... .+...
T Consensus 161 ~dfg~~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~-~~~~~-- 232 (277)
T cd05032 161 GDFGMTRDIYETDYY-----RKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSN-EEVLK-- 232 (277)
T ss_pred CCcccchhhccCccc-----ccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCH-HHHHH--
Confidence 999998765432210 11123346788999999998889999999999999999998 8889865432 11111
Q ss_pred hhcccchhhccCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 003158 733 YQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELE 783 (843)
Q Consensus 733 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~ 783 (843)
.+..+.....|..++..+.+++.+||+.+|++||++.++++.|+
T Consensus 233 -------~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~ 276 (277)
T cd05032 233 -------FVIDGGHLDLPENCPDKLLELMRMCWQYNPKMRPTFLEIVSSLK 276 (277)
T ss_pred -------HHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHhc
Confidence 11223333455667889999999999999999999999998875
No 188
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=2e-36 Score=327.49 Aligned_cols=263 Identities=25% Similarity=0.493 Sum_probs=211.6
Q ss_pred HHHcCCCCCCcccccCCeeEEEEEeC--------CCcEEEEEEeccCC-hhhHHHHHHHHHHHHhc-cCCcccceeeeee
Q 003158 508 LATNNFNSSTQIGQGGYGKVYKGILP--------DGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRL-HHRNLVSLVGYCD 577 (843)
Q Consensus 508 ~~~~~~~~~~~lg~G~~g~Vy~~~~~--------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~ 577 (843)
...++|++.+.||+|+||.||+|... ++..||+|.+.... ....+++.+|+.+++.+ +||||+++++++.
T Consensus 12 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~ 91 (304)
T cd05101 12 FSRDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACT 91 (304)
T ss_pred ccHHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEe
Confidence 44678889999999999999999741 24579999987532 33456789999999999 8999999999999
Q ss_pred cCCcEEEEEecCCCCCHHHHHhhcC--------------CCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcE
Q 003158 578 EEGEQMLVYEFMSNGTLRDQLSAKS--------------KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNI 643 (843)
Q Consensus 578 ~~~~~~lV~e~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NI 643 (843)
..+..++||||+++|+|.+++.... ...+++..+..++.||++||.|||+++ |+||||||+||
T Consensus 92 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~g---ivH~dlkp~Ni 168 (304)
T cd05101 92 QDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQK---CIHRDLAARNV 168 (304)
T ss_pred cCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCC---eeecccccceE
Confidence 9999999999999999999997642 234778889999999999999999998 99999999999
Q ss_pred EEcCCCcEEEeeccccccCCCCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHh-CCCCCCCC
Q 003158 644 LLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHG 722 (843)
Q Consensus 644 Ll~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~ellt-g~~pf~~~ 722 (843)
++++++.+||+|||+++....... ........+++.|+|||++.+..++.++||||||+++|||++ |..||...
T Consensus 169 li~~~~~~kl~D~g~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~ 243 (304)
T cd05101 169 LVTENNVMKIADFGLARDVNNIDY-----YKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI 243 (304)
T ss_pred EEcCCCcEEECCCccceecccccc-----cccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccC
Confidence 999999999999999986643221 111122345678999999999889999999999999999998 77887543
Q ss_pred cchHHHHHHHhhcccchhhccCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhh
Q 003158 723 KNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNM 788 (843)
Q Consensus 723 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~ 788 (843)
. ..+.... +..+.....+..++..+.+++.+||+.+|.+||++.++++.|+++...
T Consensus 244 ~-~~~~~~~---------~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~~~~ 299 (304)
T cd05101 244 P-VEELFKL---------LKEGHRMDKPANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRILTL 299 (304)
T ss_pred C-HHHHHHH---------HHcCCcCCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHHHHh
Confidence 2 2222211 111122233556778899999999999999999999999999988654
No 189
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-38 Score=311.97 Aligned_cols=248 Identities=26% Similarity=0.439 Sum_probs=211.1
Q ss_pred cCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCChhhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEEecC
Q 003158 511 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFM 589 (843)
Q Consensus 511 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e~~ 589 (843)
+-|.++++||+|+||.||+|.++ .|++||||.+.. ..+.+++..|+.+|++.+.+++|++||.+.....+|+|||||
T Consensus 33 EVFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV--~sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEYC 110 (502)
T KOG0574|consen 33 EVFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPV--DTDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEYC 110 (502)
T ss_pred HHHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCc--cchHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhhc
Confidence 34667889999999999999965 699999998874 345678999999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCCCC
Q 003158 590 SNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEG 669 (843)
Q Consensus 590 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~ 669 (843)
.-|++.+.++.+ ..++.+.++..+.++.++||+|||... -||||||+.|||++.+|.+|++|||.|-.+...
T Consensus 111 GAGSiSDI~R~R-~K~L~E~EIs~iL~~TLKGL~YLH~~~---KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDT---- 182 (502)
T KOG0574|consen 111 GAGSISDIMRAR-RKPLSEQEISAVLRDTLKGLQYLHDLK---KIHRDIKAGNILLNTDGIAKLADFGVAGQLTDT---- 182 (502)
T ss_pred CCCcHHHHHHHh-cCCccHHHHHHHHHHHHhHHHHHHHHH---HHHhhcccccEEEcccchhhhhhccccchhhhh----
Confidence 999999999765 457999999999999999999999988 799999999999999999999999999755321
Q ss_pred cccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhccCCCCCC
Q 003158 670 IVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSY 749 (843)
Q Consensus 670 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 749 (843)
......+.||+.|||||++..-.|+.++||||+|++..||..|++||.+-... ..++-+-....+.+
T Consensus 183 ---MAKRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPM----------RAIFMIPT~PPPTF 249 (502)
T KOG0574|consen 183 ---MAKRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPM----------RAIFMIPTKPPPTF 249 (502)
T ss_pred ---HHhhCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCccccccc----------ceeEeccCCCCCCC
Confidence 12335678999999999999999999999999999999999999999865431 11222222223333
Q ss_pred --CHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 003158 750 --PSECVEKFIKLALKCCQDETDARPSMSEVMRE 781 (843)
Q Consensus 750 --~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~ 781 (843)
|+.++.++.+++..|+-+.|++|-++.++++.
T Consensus 250 ~KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~H 283 (502)
T KOG0574|consen 250 KKPEEWSSEFNDFIRSCLIKKPEERKTALRLCEH 283 (502)
T ss_pred CChHhhhhHHHHHHHHHhcCCHHHHHHHHHHhhh
Confidence 88899999999999999999999998877653
No 190
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=100.00 E-value=3.3e-36 Score=320.27 Aligned_cols=255 Identities=29% Similarity=0.464 Sum_probs=204.8
Q ss_pred CCCCCcccccCCeeEEEEEeC-C---CcEEEEEEeccCC--hhhHHHHHHHHHHHHhccCCcccceeeeeecCCc-----
Q 003158 513 FNSSTQIGQGGYGKVYKGILP-D---GTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGE----- 581 (843)
Q Consensus 513 ~~~~~~lg~G~~g~Vy~~~~~-~---~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~----- 581 (843)
|++.+.||+|+||.||+|... + +..||+|+++... ......+.+|+++++.++|+||+++++++...+.
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 80 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP 80 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence 567889999999999999864 2 3789999987533 2334678999999999999999999998865543
Q ss_pred -EEEEEecCCCCCHHHHHhhc----CCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeec
Q 003158 582 -QMLVYEFMSNGTLRDQLSAK----SKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADF 656 (843)
Q Consensus 582 -~~lV~e~~~~gsL~~~l~~~----~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~Df 656 (843)
.++||||+++|+|.+++... ....+++..++.++.|++.||+|||+.+ |+||||||+||++++++.+||+||
T Consensus 81 ~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~df 157 (273)
T cd05035 81 KPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRN---FIHRDLAARNCMLREDMTVCVADF 157 (273)
T ss_pred ccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCC---eeccccchheEEECCCCeEEECCc
Confidence 79999999999999998543 2246888999999999999999999998 999999999999999999999999
Q ss_pred cccccCCCCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHh-CCCCCCCCcchHHHHHHHhhc
Q 003158 657 GLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQS 735 (843)
Q Consensus 657 Gla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~ellt-g~~pf~~~~~~~~~~~~~~~~ 735 (843)
|+++........ .......++..|+|||.+.+..++.++|||||||++|||++ |..||....+ .+...
T Consensus 158 g~~~~~~~~~~~-----~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~-~~~~~----- 226 (273)
T cd05035 158 GLSKKIYSGDYY-----RQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVEN-HEIYD----- 226 (273)
T ss_pred cceeeccccccc-----cccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCH-HHHHH-----
Confidence 999865432211 01112234678999999988899999999999999999999 8888865432 11111
Q ss_pred ccchhhccCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHh
Q 003158 736 SMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 785 (843)
Q Consensus 736 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~ 785 (843)
.+..+.....+..++..+.+++.+||+.+|.+||++.++++.|+++
T Consensus 227 ----~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~ 272 (273)
T cd05035 227 ----YLRHGNRLKQPEDCLDELYDLMYSCWRADPKDRPTFTKLREVLENI 272 (273)
T ss_pred ----HHHcCCCCCCCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 2222333345566778899999999999999999999999998864
No 191
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=100.00 E-value=7.4e-36 Score=316.51 Aligned_cols=258 Identities=25% Similarity=0.407 Sum_probs=212.0
Q ss_pred cCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccC---ChhhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEE
Q 003158 511 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEG---SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 586 (843)
Q Consensus 511 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~ 586 (843)
++|+..+.||+|+||.||+|... +|+.||+|.++.. .....+.+.+|++++++++|+||+++++++.+.+..++||
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 81 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVL 81 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence 57889999999999999999976 7999999988632 2223567899999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhc--CCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCC
Q 003158 587 EFMSNGTLRDQLSAK--SKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPV 664 (843)
Q Consensus 587 e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~ 664 (843)
||+++|+|.+++... ....+++..++.++.|+++||.|||+.+ |+||||||+||+++.++.++|+|||++.....
T Consensus 82 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~---i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~ 158 (267)
T cd08224 82 ELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKR---IMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred ecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCC---EecCCcChhhEEECCCCcEEEeccceeeeccC
Confidence 999999999998652 3345889999999999999999999999 99999999999999999999999999876543
Q ss_pred CCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhccC
Q 003158 665 PDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDG 744 (843)
Q Consensus 665 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 744 (843)
.. .......++..|+|||.+.+..++.++|||||||++|||++|+.||............ ....+
T Consensus 159 ~~-------~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~--------~~~~~ 223 (267)
T cd08224 159 KT-------TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCK--------KIEKC 223 (267)
T ss_pred CC-------cccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCccHHHHHh--------hhhcC
Confidence 21 1112345788999999999888999999999999999999999999654321111111 11122
Q ss_pred CCCCCCH-HHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhh
Q 003158 745 NMGSYPS-ECVEKFIKLALKCCQDETDARPSMSEVMRELESIW 786 (843)
Q Consensus 745 ~~~~~~~-~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~ 786 (843)
.....+. .++..+.+++.+||..+|++||++.++++.++.+.
T Consensus 224 ~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~~ 266 (267)
T cd08224 224 DYPPLPADHYSEELRDLVSRCINPDPEKRPDISYVLQVAKEMH 266 (267)
T ss_pred CCCCCChhhcCHHHHHHHHHHcCCCcccCCCHHHHHHHHHHhc
Confidence 2333333 66778999999999999999999999999998763
No 192
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=2.4e-36 Score=327.44 Aligned_cols=261 Identities=26% Similarity=0.484 Sum_probs=209.5
Q ss_pred HcCCCCCCcccccCCeeEEEEEeC--------CCcEEEEEEeccCC-hhhHHHHHHHHHHHHhc-cCCcccceeeeeecC
Q 003158 510 TNNFNSSTQIGQGGYGKVYKGILP--------DGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEE 579 (843)
Q Consensus 510 ~~~~~~~~~lg~G~~g~Vy~~~~~--------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~ 579 (843)
.++|.+.+.||+|+||.||+|... +...+|+|.+.... .....++.+|+++++.+ +|+||+++++++...
T Consensus 17 ~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~ 96 (307)
T cd05098 17 RDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD 96 (307)
T ss_pred hHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecC
Confidence 467999999999999999999752 23579999987542 23346788899999999 799999999999999
Q ss_pred CcEEEEEecCCCCCHHHHHhhcCC--------------CCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEE
Q 003158 580 GEQMLVYEFMSNGTLRDQLSAKSK--------------EPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILL 645 (843)
Q Consensus 580 ~~~~lV~e~~~~gsL~~~l~~~~~--------------~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl 645 (843)
+..++||||+++|+|.+++..+.. ..+++..++.++.|++.||+|||+++ ++||||||+||++
T Consensus 97 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~g---i~H~dlkp~Nill 173 (307)
T cd05098 97 GPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKK---CIHRDLAARNVLV 173 (307)
T ss_pred CceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCC---cccccccHHheEE
Confidence 999999999999999999976421 34788999999999999999999998 9999999999999
Q ss_pred cCCCcEEEeeccccccCCCCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHh-CCCCCCCCcc
Q 003158 646 DHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKN 724 (843)
Q Consensus 646 ~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~ellt-g~~pf~~~~~ 724 (843)
++++.+||+|||.++........ .......++..|+|||.+.+..++.++|||||||++|||++ |..||....
T Consensus 174 ~~~~~~kL~dfg~a~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~- 247 (307)
T cd05098 174 TEDNVMKIADFGLARDIHHIDYY-----KKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP- 247 (307)
T ss_pred cCCCcEEECCCcccccccccchh-----hccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCC-
Confidence 99999999999998765422110 11112234568999999999889999999999999999998 888886433
Q ss_pred hHHHHHHHhhcccchhhccCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhh
Q 003158 725 IVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNM 788 (843)
Q Consensus 725 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~ 788 (843)
..+.... +........+..++.++.+++.+||..+|++||++.++++.|+.+...
T Consensus 248 ~~~~~~~---------~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~~~~~ 302 (307)
T cd05098 248 VEELFKL---------LKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILAL 302 (307)
T ss_pred HHHHHHH---------HHcCCCCCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHHH
Confidence 2211111 111122234556678899999999999999999999999999987653
No 193
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=100.00 E-value=3.5e-36 Score=323.33 Aligned_cols=258 Identities=30% Similarity=0.484 Sum_probs=207.0
Q ss_pred CCCCCCcccccCCeeEEEEEeC------CCcEEEEEEeccCCh-hhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEE
Q 003158 512 NFNSSTQIGQGGYGKVYKGILP------DGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQML 584 (843)
Q Consensus 512 ~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~l 584 (843)
+|++.+.||+|+||.||+|... ....+|+|.+..... ....++.+|+++++.++||||+++++.+..++..++
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 80 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLL 80 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcEE
Confidence 4778899999999999999853 235799998875433 334678899999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHhhcC----------------------CCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCc
Q 003158 585 VYEFMSNGTLRDQLSAKS----------------------KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASN 642 (843)
Q Consensus 585 V~e~~~~gsL~~~l~~~~----------------------~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~N 642 (843)
||||+.+|+|.+++.... ..++++..++.++.|++.||+|||+.+ |+||||||+|
T Consensus 81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~---ivH~dikp~n 157 (290)
T cd05045 81 IVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMK---LVHRDLAARN 157 (290)
T ss_pred EEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCC---eehhhhhhhe
Confidence 999999999999986421 135788899999999999999999998 9999999999
Q ss_pred EEEcCCCcEEEeeccccccCCCCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHh-CCCCCCC
Q 003158 643 ILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISH 721 (843)
Q Consensus 643 ILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~ellt-g~~pf~~ 721 (843)
|++++++.+||+|||+++........ .......++..|+|||.+.+..++.++|||||||++|||++ |..||..
T Consensus 158 ill~~~~~~kl~dfg~~~~~~~~~~~-----~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~ 232 (290)
T cd05045 158 VLVAEGRKMKISDFGLSRDVYEEDSY-----VKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPG 232 (290)
T ss_pred EEEcCCCcEEeccccccccccCccch-----hcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCC
Confidence 99999999999999999765322110 01122345678999999998899999999999999999999 9988864
Q ss_pred CcchHHHHHHHhhcccchhhccCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhh
Q 003158 722 GKNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWN 787 (843)
Q Consensus 722 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~ 787 (843)
.. ..+.... . ........+..++.++.+++..||+.+|++||++.++++.|+++..
T Consensus 233 ~~-~~~~~~~-~--------~~~~~~~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~~~ 288 (290)
T cd05045 233 IA-PERLFNL-L--------KTGYRMERPENCSEEMYNLMLTCWKQEPDKRPTFADISKELEKMMV 288 (290)
T ss_pred CC-HHHHHHH-H--------hCCCCCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHHHHh
Confidence 43 2221111 1 1111223355667789999999999999999999999999998754
No 194
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=100.00 E-value=3e-36 Score=316.80 Aligned_cols=248 Identities=28% Similarity=0.463 Sum_probs=200.1
Q ss_pred CcccccCCeeEEEEEeC-CCcEEEEEEeccCC-hhhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEEecCCCCCH
Q 003158 517 TQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTL 594 (843)
Q Consensus 517 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e~~~~gsL 594 (843)
+.||+|+||.||+|... +++.||+|.+.... ......+.+|+++++.++||||+++++++...+..++||||+++++|
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDF 80 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCcH
Confidence 46899999999999964 78999999876433 33456789999999999999999999999999999999999999999
Q ss_pred HHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCCCCcccce
Q 003158 595 RDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAH 674 (843)
Q Consensus 595 ~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~ 674 (843)
.+++.... ..+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++........ ..
T Consensus 81 ~~~~~~~~-~~~~~~~~~~~~~qi~~~L~~lH~~~---i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~-----~~ 151 (252)
T cd05084 81 LTFLRTEG-PRLKVKELIQMVENAAAGMEYLESKH---CIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVY-----AS 151 (252)
T ss_pred HHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhCC---ccccccchheEEEcCCCcEEECccccCcccccccc-----cc
Confidence 99996543 35789999999999999999999999 99999999999999999999999999875432110 00
Q ss_pred eeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHh-CCCCCCCCcchHHHHHHHhhcccchhhccCCCCCCCHHH
Q 003158 675 VSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSEC 753 (843)
Q Consensus 675 ~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 753 (843)
......++..|+|||.+.+..++.++|||||||++|||++ |..||....... ... .+........+..+
T Consensus 152 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~--~~~--------~~~~~~~~~~~~~~ 221 (252)
T cd05084 152 TGGMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQ--TRE--------AIEQGVRLPCPELC 221 (252)
T ss_pred cCCCCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHHH--HHH--------HHHcCCCCCCcccC
Confidence 0011123457999999999889999999999999999998 888886443211 111 11111222345566
Q ss_pred HHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 003158 754 VEKFIKLALKCCQDETDARPSMSEVMRELE 783 (843)
Q Consensus 754 ~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~ 783 (843)
+..+.+++.+|++.+|++||++.++.+.|+
T Consensus 222 ~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 251 (252)
T cd05084 222 PDAVYRLMERCWEYDPGQRPSFSTVHQELQ 251 (252)
T ss_pred CHHHHHHHHHHcCCChhhCcCHHHHHHHHh
Confidence 788999999999999999999999998875
No 195
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=100.00 E-value=4.4e-36 Score=324.36 Aligned_cols=262 Identities=24% Similarity=0.394 Sum_probs=209.7
Q ss_pred HHHHcCCCCCCcccccCCeeEEEEEeC------CCcEEEEEEeccCC-hhhHHHHHHHHHHHHhc-cCCcccceeeeeec
Q 003158 507 ALATNNFNSSTQIGQGGYGKVYKGILP------DGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDE 578 (843)
Q Consensus 507 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~ 578 (843)
....++|...+.||+|+||.||+|... .+..||+|.++... ....+.+.+|+++++++ +|+||+++++++..
T Consensus 31 ~~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~ 110 (302)
T cd05055 31 EFPRNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTI 110 (302)
T ss_pred cccHHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEec
Confidence 344567999999999999999999741 34589999987543 23346789999999999 79999999999999
Q ss_pred CCcEEEEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccc
Q 003158 579 EGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGL 658 (843)
Q Consensus 579 ~~~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGl 658 (843)
.+..++||||+++|+|.++++......+++.++..++.|++.||+|||+++ |+|+||||+||+++.++.++++|||+
T Consensus 111 ~~~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~~l~dfg~ 187 (302)
T cd05055 111 GGPILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKN---CIHRDLAARNVLLTHGKIVKICDFGL 187 (302)
T ss_pred CCceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC---eehhhhccceEEEcCCCeEEECCCcc
Confidence 999999999999999999997655445899999999999999999999998 99999999999999999999999999
Q ss_pred cccCCCCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHh-CCCCCCCCcchHHHHHHHhhccc
Q 003158 659 SRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSM 737 (843)
Q Consensus 659 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~ 737 (843)
++....... ........++..|+|||.+.+..++.++|||||||++|||++ |..||........... ...
T Consensus 188 ~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~~~~~-~~~--- 258 (302)
T cd05055 188 ARDIMNDSN-----YVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDSKFYK-LIK--- 258 (302)
T ss_pred cccccCCCc-----eeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchHHHHH-HHH---
Confidence 976542210 011122345678999999999999999999999999999998 9999875432211111 111
Q ss_pred chhhccCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHh
Q 003158 738 MFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 785 (843)
Q Consensus 738 ~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~ 785 (843)
.+.....+...++++.+++.+|++.+|++||++.++++.|++.
T Consensus 259 -----~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~~ 301 (302)
T cd05055 259 -----EGYRMAQPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQLIGKQ 301 (302)
T ss_pred -----cCCcCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHhh
Confidence 1111122334467899999999999999999999999998863
No 196
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=100.00 E-value=2.5e-36 Score=319.06 Aligned_cols=256 Identities=25% Similarity=0.451 Sum_probs=208.9
Q ss_pred HHHcCCCCCCcccccCCeeEEEEEeCCCcEEEEEEeccCChhhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEEe
Q 003158 508 LATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 587 (843)
Q Consensus 508 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e 587 (843)
+..++|++.+.||+|+||.||+|...++..+|+|.+.... ...+.+.+|+++++.++|+||+++++++.+ ...++|||
T Consensus 3 ~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~v~e 80 (260)
T cd05073 3 IPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITE 80 (260)
T ss_pred ccccceeEEeEecCccceEEEEEEecCCccEEEEecCCCh-hHHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeEEEEE
Confidence 3456888999999999999999998778889999887532 334678899999999999999999999887 78899999
Q ss_pred cCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCC
Q 003158 588 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 667 (843)
Q Consensus 588 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~ 667 (843)
|+++++|.+++.......+++..++.++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||.+........
T Consensus 81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~---i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~ 157 (260)
T cd05073 81 FMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRN---YIHRDLRAANILVSASLVCKIADFGLARVIEDNEY 157 (260)
T ss_pred eCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhCC---ccccccCcceEEEcCCCcEEECCCcceeeccCCCc
Confidence 999999999997765566888999999999999999999998 99999999999999999999999999976542211
Q ss_pred CCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHh-CCCCCCCCcchHHHHHHHhhcccchhhccCCC
Q 003158 668 EGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGNM 746 (843)
Q Consensus 668 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 746 (843)
.......++..|+|||++....++.++|+|||||++||+++ |+.||...... +.... +..+..
T Consensus 158 ------~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~-~~~~~---------~~~~~~ 221 (260)
T cd05073 158 ------TAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNP-EVIRA---------LERGYR 221 (260)
T ss_pred ------ccccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHH-HHHHH---------HhCCCC
Confidence 11122345678999999998889999999999999999999 89898754321 11111 111111
Q ss_pred CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 003158 747 GSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELES 784 (843)
Q Consensus 747 ~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~ 784 (843)
...+...+.++.+++.+||+.+|++||++.++...|+.
T Consensus 222 ~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~~ 259 (260)
T cd05073 222 MPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDD 259 (260)
T ss_pred CCCcccCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 22334566788999999999999999999999998875
No 197
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=100.00 E-value=4e-37 Score=336.81 Aligned_cols=203 Identities=27% Similarity=0.318 Sum_probs=173.3
Q ss_pred cCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCC---hhhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEE
Q 003158 511 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 586 (843)
Q Consensus 511 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~ 586 (843)
++|++.+.||+|+||+||+++.. +++.||+|++.... ......+.+|..++..++|+||+++++++.+.+..++||
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~ 80 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVM 80 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 47889999999999999999965 68899999986422 122345788999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCC
Q 003158 587 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 666 (843)
Q Consensus 587 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~ 666 (843)
||+++|+|.+++.... ..+++..+..++.|++.||+|||+++ |+||||||+|||++.++.+||+|||++.......
T Consensus 81 Ey~~gg~L~~~l~~~~-~~l~~~~~~~~~~qi~~~L~~lH~~~---iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~ 156 (331)
T cd05624 81 DYYVGGDLLTLLSKFE-DRLPEDMARFYIAEMVLAIHSIHQLH---YVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDG 156 (331)
T ss_pred eCCCCCcHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCchHHEEEcCCCCEEEEeccceeeccCCC
Confidence 9999999999997632 35788899999999999999999999 9999999999999999999999999997654321
Q ss_pred CCCcccceeeeeecccCCccCchhccc-----CCCCchhhhHHHHHHHHHHHhCCCCCCCCc
Q 003158 667 IEGIVPAHVSTVVKGTPGYLDPEYFLT-----HKLTDKSDVYSLGVVFLELLTGMQPISHGK 723 (843)
Q Consensus 667 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~sDvwS~G~~l~elltg~~pf~~~~ 723 (843)
........||+.|+|||++.+ ..++.++|||||||++|||++|+.||....
T Consensus 157 ------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~ 212 (331)
T cd05624 157 ------TVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAES 212 (331)
T ss_pred ------ceeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCC
Confidence 111233569999999999876 467889999999999999999999997543
No 198
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=100.00 E-value=3.9e-36 Score=325.04 Aligned_cols=288 Identities=26% Similarity=0.410 Sum_probs=226.1
Q ss_pred HcCCCCCCcccccCCeeEEEEEeC-CCc----EEEEEEeccCCh-hhHHHHHHHHHHHHhccCCcccceeeeeecCCcEE
Q 003158 510 TNNFNSSTQIGQGGYGKVYKGILP-DGT----VVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQM 583 (843)
Q Consensus 510 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~----~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~ 583 (843)
.++|+..+.||+|+||.||+|.+. ++. .||+|.+..... ....++.+|+.+++.++||||+++++++... ..+
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~-~~~ 84 (303)
T cd05110 6 ETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSP-TIQ 84 (303)
T ss_pred hhhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-Cce
Confidence 457788899999999999999863 443 578998875432 2345788999999999999999999998654 567
Q ss_pred EEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCC
Q 003158 584 LVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAP 663 (843)
Q Consensus 584 lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~ 663 (843)
+|+||+++|+|.+++.... ..+++..+..++.|++.||+|||+++ |+||||||+||++++++.+||+|||+++...
T Consensus 85 ~v~e~~~~g~l~~~~~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~~---ivH~dikp~Nill~~~~~~kL~Dfg~~~~~~ 160 (303)
T cd05110 85 LVTQLMPHGCLLDYVHEHK-DNIGSQLLLNWCVQIAKGMMYLEERR---LVHRDLAARNVLVKSPNHVKITDFGLARLLE 160 (303)
T ss_pred eeehhcCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHhhcC---eeccccccceeeecCCCceEEcccccccccc
Confidence 9999999999999986543 35788899999999999999999998 9999999999999999999999999998654
Q ss_pred CCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHh-CCCCCCCCcchHHHHHHHhhcccchhhc
Q 003158 664 VPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVI 742 (843)
Q Consensus 664 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 742 (843)
.... ........++..|+|||.+.+..++.++|||||||++|||++ |..||..... +.......
T Consensus 161 ~~~~-----~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~--~~~~~~~~-------- 225 (303)
T cd05110 161 GDEK-----EYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPT--REIPDLLE-------- 225 (303)
T ss_pred Cccc-----ccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCH--HHHHHHHH--------
Confidence 2211 111122345678999999999999999999999999999998 8899865321 11111111
Q ss_pred cCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCCCCccCCCCCc
Q 003158 743 DGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPY 822 (843)
Q Consensus 743 ~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~sa~e~L~Hp~ 822 (843)
.+.....+..++..+.+++..||..+|++||++.++++.++.+.+.. .+.+...+++|+.+...-.|||
T Consensus 226 ~~~~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~ 294 (303)
T cd05110 226 KGERLPQPPICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRMARDP-----------QRYLVIQGDDRMKLPSPNDSKF 294 (303)
T ss_pred CCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhch-----------hhheeeccCCcCCCCCCchhhH
Confidence 11112223445678899999999999999999999999998864321 2346778999999999999999
Q ss_pred ccCCCC
Q 003158 823 VSSDVS 828 (843)
Q Consensus 823 f~~~~~ 828 (843)
|..-..
T Consensus 295 ~~~~~~ 300 (303)
T cd05110 295 FQNLLD 300 (303)
T ss_pred Hhcccc
Confidence 987543
No 199
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=100.00 E-value=2.5e-36 Score=318.20 Aligned_cols=249 Identities=30% Similarity=0.484 Sum_probs=204.3
Q ss_pred HcCCCCCCcccccCCeeEEEEEeCCCcEEEEEEeccCChhhHHHHHHHHHHHHhccCCcccceeeee-ecCCcEEEEEec
Q 003158 510 TNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYC-DEEGEQMLVYEF 588 (843)
Q Consensus 510 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~-~~~~~~~lV~e~ 588 (843)
..+|++.+.||+|+||.||+|... |+.||+|...... ..+.+.+|+.++++++|+|++++++++ ...+..++||||
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~k~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~ 81 (256)
T cd05082 5 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY 81 (256)
T ss_pred HHhCeeeeeecccCCCeEEEEEEc-CCcEEEEEeCCCc--hHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEEC
Confidence 357888999999999999999864 7789999986432 346789999999999999999999976 455678999999
Q ss_pred CCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCCC
Q 003158 589 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 668 (843)
Q Consensus 589 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 668 (843)
+++++|.+++.......+++..++.++.|++.||+|||+++ ++||||||+||++++++.+||+|||++.......
T Consensus 82 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~-- 156 (256)
T cd05082 82 MAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANN---FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ-- 156 (256)
T ss_pred CCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC---EeccccchheEEEcCCCcEEecCCccceeccccC--
Confidence 99999999998766556889999999999999999999998 9999999999999999999999999987543211
Q ss_pred CcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHh-CCCCCCCCcchHHHHHHHhhcccchhhccCCCC
Q 003158 669 GIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGNMG 747 (843)
Q Consensus 669 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 747 (843)
....++..|+|||++.+..++.++|||||||++|||++ |+.||.... ..+.... +..+...
T Consensus 157 --------~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~-~~~~~~~---------~~~~~~~ 218 (256)
T cd05082 157 --------DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIP-LKDVVPR---------VEKGYKM 218 (256)
T ss_pred --------CCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCC-HHHHHHH---------HhcCCCC
Confidence 12234567999999998889999999999999999998 999986432 1111111 1111122
Q ss_pred CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 003158 748 SYPSECVEKFIKLALKCCQDETDARPSMSEVMRELES 784 (843)
Q Consensus 748 ~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~ 784 (843)
..++.++..+.+++.+||+.+|++||++.++++.|+.
T Consensus 219 ~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 255 (256)
T cd05082 219 DAPDGCPPVVYDVMKQCWHLDAATRPSFLQLREQLEH 255 (256)
T ss_pred CCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHhc
Confidence 3345667889999999999999999999999998875
No 200
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=100.00 E-value=1.1e-36 Score=325.33 Aligned_cols=259 Identities=24% Similarity=0.407 Sum_probs=201.9
Q ss_pred cCCCCCCcccccCCeeEEEEEe-CCCcEEEEEEeccC-ChhhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEEec
Q 003158 511 NNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEG-SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 588 (843)
Q Consensus 511 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e~ 588 (843)
++|+..+.||+|+||.||+|.. .+++.||+|.+... .....+++.+|++++++++||||+++++++...+..++||||
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 80 (279)
T cd06619 1 QDIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEF 80 (279)
T ss_pred CcchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEec
Confidence 3677889999999999999995 47899999998654 233456789999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCCC
Q 003158 589 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 668 (843)
Q Consensus 589 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 668 (843)
+++++|..+. .+++..+..++.|++.||.|||+.+ |+|+||||+||+++.++.++|+|||++......
T Consensus 81 ~~~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~--- 148 (279)
T cd06619 81 MDGGSLDVYR------KIPEHVLGRIAVAVVKGLTYLWSLK---ILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNS--- 148 (279)
T ss_pred CCCCChHHhh------cCCHHHHHHHHHHHHHHHHHHHHCC---EeeCCCCHHHEEECCCCCEEEeeCCcceecccc---
Confidence 9999997653 3677888899999999999999999 999999999999999999999999999754321
Q ss_pred CcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhccCCCCC
Q 003158 669 GIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGS 748 (843)
Q Consensus 669 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 748 (843)
......|+..|+|||++.+..++.++|||||||++|||++|+.||......... .
T Consensus 149 ------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~-------------------~ 203 (279)
T cd06619 149 ------IAKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGS-------------------L 203 (279)
T ss_pred ------cccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccc-------------------c
Confidence 122346889999999999999999999999999999999999999642210000 0
Q ss_pred CCHHHHHHHHHHHHHhcc-cCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCCCCccCCCCCcccCCC
Q 003158 749 YPSECVEKFIKLALKCCQ-DETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSSDV 827 (843)
Q Consensus 749 ~~~~~~~~l~~l~~~c~~-~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~sa~e~L~Hp~f~~~~ 827 (843)
.+ ... ..|+. .++...|. ...+....+++.+|+..||++||+++|+++||||..-.
T Consensus 204 ~~----~~~----~~~~~~~~~~~~~~---------------~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~~~~~~~~ 260 (279)
T cd06619 204 MP----LQL----LQCIVDEDPPVLPV---------------GQFSEKFVHFITQCMRKQPKERPAPENLMDHPFIVQYN 260 (279)
T ss_pred ch----HHH----HHHHhccCCCCCCC---------------CcCCHHHHHHHHHHhhCChhhCCCHHHHhcCccccccc
Confidence 00 000 01111 11111100 01122344788889999999999999999999998765
Q ss_pred CC
Q 003158 828 SG 829 (843)
Q Consensus 828 ~~ 829 (843)
.+
T Consensus 261 ~~ 262 (279)
T cd06619 261 DG 262 (279)
T ss_pred Cc
Confidence 54
No 201
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=100.00 E-value=4.8e-36 Score=314.79 Aligned_cols=247 Identities=29% Similarity=0.488 Sum_probs=201.2
Q ss_pred CcccccCCeeEEEEEeCCCcEEEEEEeccCCh-hhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEEecCCCCCHH
Q 003158 517 TQIGQGGYGKVYKGILPDGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLR 595 (843)
Q Consensus 517 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e~~~~gsL~ 595 (843)
+.||+|+||.||+|...+++.||+|.+..... .....+.+|+++++.++||||+++++++...+..++||||+++++|.
T Consensus 1 ~~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 80 (250)
T cd05085 1 ELLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDFL 80 (250)
T ss_pred CccCCCCCceEEEEEecCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCcHH
Confidence 36899999999999988899999999875433 23457889999999999999999999999999999999999999999
Q ss_pred HHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCCCCccccee
Q 003158 596 DQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHV 675 (843)
Q Consensus 596 ~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~ 675 (843)
+++.... ..+++..++.++.|++.||.|+|+.+ ++||||||+||++++++.+||+|||++........ ..
T Consensus 81 ~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~---~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~------~~ 150 (250)
T cd05085 81 SFLRKKK-DELKTKQLVKFALDAAAGMAYLESKN---CIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIY------SS 150 (250)
T ss_pred HHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCC---eeecccChheEEEcCCCeEEECCCccceecccccc------cc
Confidence 9986543 35789999999999999999999998 99999999999999999999999999875432110 01
Q ss_pred eeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHh-CCCCCCCCcchHHHHHHHhhcccchhhccCCCCCCCHHHH
Q 003158 676 STVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECV 754 (843)
Q Consensus 676 ~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 754 (843)
.....++..|+|||++.+..++.++||||||+++||+++ |..||...... .... .+..+.....+..++
T Consensus 151 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~-~~~~---------~~~~~~~~~~~~~~~ 220 (250)
T cd05085 151 SGLKQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQ-QARE---------QVEKGYRMSCPQKCP 220 (250)
T ss_pred CCCCCCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHH-HHHH---------HHHcCCCCCCCCCCC
Confidence 112234568999999998899999999999999999999 99999654321 1111 111112223345567
Q ss_pred HHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 003158 755 EKFIKLALKCCQDETDARPSMSEVMRELE 783 (843)
Q Consensus 755 ~~l~~l~~~c~~~~p~~RPs~~~vl~~L~ 783 (843)
..+.+++.+|+..+|++||++.++.+.|.
T Consensus 221 ~~~~~li~~~l~~~p~~Rp~~~~l~~~l~ 249 (250)
T cd05085 221 DDVYKVMQRCWDYKPENRPKFSELQKELA 249 (250)
T ss_pred HHHHHHHHHHcccCcccCCCHHHHHHHhc
Confidence 88999999999999999999999998764
No 202
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-37 Score=324.13 Aligned_cols=257 Identities=22% Similarity=0.349 Sum_probs=211.8
Q ss_pred cCCCCCCcccccCCeeEEEEEe-CCCcEEEEEEeccCChhh--HHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEEe
Q 003158 511 NNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQG--EKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 587 (843)
Q Consensus 511 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e 587 (843)
.-|...+.||+|.|..|-.|++ -.|..||||++.+..... ...+.+|+++|+.++|||||++|++......+|||+|
T Consensus 18 GLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiLE 97 (864)
T KOG4717|consen 18 GLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLILE 97 (864)
T ss_pred eeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEEE
Confidence 4577788999999999999984 489999999998754433 4578899999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEE-cCCCcEEEeeccccccCCCCC
Q 003158 588 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILL-DHKFTAKVADFGLSRLAPVPD 666 (843)
Q Consensus 588 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl-~~~~~~kl~DfGla~~~~~~~ 666 (843)
.-++|+|.|||-++. ..+.+....+++.||+.|+.|+|+.. +|||||||+||.+ .+-|-|||.|||++..+.
T Consensus 98 LGD~GDl~DyImKHe-~Gl~E~La~kYF~QI~~AI~YCHqLH---VVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~--- 170 (864)
T KOG4717|consen 98 LGDGGDLFDYIMKHE-EGLNEDLAKKYFAQIVHAISYCHQLH---VVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQ--- 170 (864)
T ss_pred ecCCchHHHHHHhhh-ccccHHHHHHHHHHHHHHHHHHhhhh---hhcccCCcceeEEeeecCceEeeeccccccCC---
Confidence 999999999997654 35889999999999999999999999 9999999999876 567899999999997665
Q ss_pred CCCcccceeeeeecccCCccCchhcccCCCCc-hhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhccCC
Q 003158 667 IEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTD-KSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGN 745 (843)
Q Consensus 667 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~-~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 745 (843)
+....+..+|+..|-|||++.+..|+. ++||||+||+||.|++|+.||....+-+. +
T Consensus 171 -----PG~kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSET----------L------- 228 (864)
T KOG4717|consen 171 -----PGKKLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSET----------L------- 228 (864)
T ss_pred -----CcchhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchhh----------h-------
Confidence 345567788999999999999998875 68999999999999999999976543111 1
Q ss_pred CCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCCCCccCCCCCcccC
Q 003158 746 MGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSS 825 (843)
Q Consensus 746 ~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~sa~e~L~Hp~f~~ 825 (843)
-.|+.|--.-| .....+..|||.+||+-||++|.|.+|+..|+|++.
T Consensus 229 -------------TmImDCKYtvP--------------------shvS~eCrdLI~sMLvRdPkkRAslEeI~s~~Wlq~ 275 (864)
T KOG4717|consen 229 -------------TMIMDCKYTVP--------------------SHVSKECRDLIQSMLVRDPKKRASLEEIVSTSWLQA 275 (864)
T ss_pred -------------hhhhcccccCc--------------------hhhhHHHHHHHHHHHhcCchhhccHHHHhccccccC
Confidence 12233322111 011223347888899999999999999999999987
Q ss_pred CCCC
Q 003158 826 DVSG 829 (843)
Q Consensus 826 ~~~~ 829 (843)
.+.|
T Consensus 276 ~D~~ 279 (864)
T KOG4717|consen 276 GDRG 279 (864)
T ss_pred CCCC
Confidence 6654
No 203
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=100.00 E-value=2.6e-36 Score=317.85 Aligned_cols=250 Identities=24% Similarity=0.382 Sum_probs=208.2
Q ss_pred CCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccC-ChhhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEEecC
Q 003158 512 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEG-SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFM 589 (843)
Q Consensus 512 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e~~ 589 (843)
+|++.+.||+|+||.||++... +++.||+|.+... .....+.+.+|+.+++.++|+||+++++++.+++..++||||+
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEYC 80 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEeeC
Confidence 4778899999999999999965 6899999988643 2334567889999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCCCC
Q 003158 590 SNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEG 669 (843)
Q Consensus 590 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~ 669 (843)
++|+|.+++.......+++..++.++.|++.||.|||+.+ |+|+||||+||++++++.++++|||.+.......
T Consensus 81 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~---i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~--- 154 (255)
T cd08219 81 DGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKR---VLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPG--- 154 (255)
T ss_pred CCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhCC---cccCCCCcceEEECCCCcEEEcccCcceeecccc---
Confidence 9999999987655566889999999999999999999999 9999999999999999999999999987654221
Q ss_pred cccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhccCCCCCC
Q 003158 670 IVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSY 749 (843)
Q Consensus 670 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 749 (843)
.......|++.|+|||++.+..++.++||||||+++|+|++|+.||...... .... .+..+.....
T Consensus 155 ----~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~-~~~~---------~~~~~~~~~~ 220 (255)
T cd08219 155 ----AYACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWK-NLIL---------KVCQGSYKPL 220 (255)
T ss_pred ----cccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCHH-HHHH---------HHhcCCCCCC
Confidence 1123346888999999999988999999999999999999999999754321 1111 1222333344
Q ss_pred CHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 003158 750 PSECVEKFIKLALKCCQDETDARPSMSEVMRE 781 (843)
Q Consensus 750 ~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~ 781 (843)
+..++..+.+++.+||+.+|++||++.+++..
T Consensus 221 ~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 221 PSHYSYELRSLIKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred CcccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence 55667788999999999999999999998753
No 204
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=100.00 E-value=4.9e-36 Score=318.23 Aligned_cols=258 Identities=28% Similarity=0.487 Sum_probs=207.8
Q ss_pred HcCCCCCCcccccCCeeEEEEEeC-CC---cEEEEEEeccCC-hhhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEE
Q 003158 510 TNNFNSSTQIGQGGYGKVYKGILP-DG---TVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQML 584 (843)
Q Consensus 510 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~---~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~l 584 (843)
.++|+..+.||+|+||.||+|... ++ ..+|+|.+.... ....+++..|+++++.++|+||+++++++.+.+..++
T Consensus 4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 83 (268)
T cd05063 4 PSHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAMI 83 (268)
T ss_pred hHHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcEE
Confidence 457888899999999999999964 33 379999987543 3335678999999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCC
Q 003158 585 VYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPV 664 (843)
Q Consensus 585 V~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~ 664 (843)
||||+++++|.+++.... ..+++..+..++.|++.||+|||+.+ ++||||||+||++++++.+||+|||++.....
T Consensus 84 v~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~al~~lH~~~---i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~ 159 (268)
T cd05063 84 ITEYMENGALDKYLRDHD-GEFSSYQLVGMLRGIAAGMKYLSDMN---YVHRDLAARNILVNSNLECKVSDFGLSRVLED 159 (268)
T ss_pred EEEcCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCC---eeccccchhhEEEcCCCcEEECCCccceeccc
Confidence 999999999999997643 45889999999999999999999998 99999999999999999999999999876543
Q ss_pred CCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHh-CCCCCCCCcchHHHHHHHhhcccchhhcc
Q 003158 665 PDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVID 743 (843)
Q Consensus 665 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 743 (843)
.... .........+..|+|||++.+..++.++|||||||++|||++ |+.||..... .+.... +..
T Consensus 160 ~~~~----~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~-~~~~~~---------i~~ 225 (268)
T cd05063 160 DPEG----TYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSN-HEVMKA---------IND 225 (268)
T ss_pred cccc----ceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCH-HHHHHH---------Hhc
Confidence 2110 111111223457999999998889999999999999999998 9999965432 111111 111
Q ss_pred CCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHh
Q 003158 744 GNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 785 (843)
Q Consensus 744 ~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~ 785 (843)
....+.+.+++..+.+++.+||+.+|++||++.++++.|+++
T Consensus 226 ~~~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~~ 267 (268)
T cd05063 226 GFRLPAPMDCPSAVYQLMLQCWQQDRARRPRFVDIVNLLDKL 267 (268)
T ss_pred CCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 122233445677889999999999999999999999998864
No 205
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=100.00 E-value=3.7e-36 Score=321.91 Aligned_cols=265 Identities=28% Similarity=0.421 Sum_probs=205.2
Q ss_pred CC-CCCCcccccCCeeEEEEEe-----CCCcEEEEEEeccCCh-hhHHHHHHHHHHHHhccCCcccceeeeeecC--CcE
Q 003158 512 NF-NSSTQIGQGGYGKVYKGIL-----PDGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE--GEQ 582 (843)
Q Consensus 512 ~~-~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~--~~~ 582 (843)
+| +..+.||+|+||+||++.. .+++.||+|.+..... ...+.+.+|+++++.++||||+++++++... ...
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (283)
T cd05080 4 RYLKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGL 83 (283)
T ss_pred hhceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceE
Confidence 44 7889999999999988653 3578999999875432 3456788999999999999999999988653 468
Q ss_pred EEEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccC
Q 003158 583 MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLA 662 (843)
Q Consensus 583 ~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~ 662 (843)
++||||+++++|.+++... .+++..++.++.|+++||.|||+.+ |+||||||+||++++++.+||+|||+++..
T Consensus 84 ~lv~e~~~~~~l~~~~~~~---~l~~~~~~~i~~~l~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~~l~dfg~~~~~ 157 (283)
T cd05080 84 QLIMEYVPLGSLRDYLPKH---KLNLAQLLLFAQQICEGMAYLHSQH---YIHRDLAARNVLLDNDRLVKIGDFGLAKAV 157 (283)
T ss_pred EEEecCCCCCCHHHHHHHc---CCCHHHHHHHHHHHHHHHHHHHHCC---eeccccChheEEEcCCCcEEEeeccccccc
Confidence 9999999999999999653 4899999999999999999999998 999999999999999999999999999865
Q ss_pred CCCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHH-Hh---hcccc
Q 003158 663 PVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNI-AY---QSSMM 738 (843)
Q Consensus 663 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~-~~---~~~~~ 738 (843)
...... ........++..|+|||.+.+..++.++|||||||++|||++|+.|+............ .. .....
T Consensus 158 ~~~~~~----~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 233 (283)
T cd05080 158 PEGHEY----YRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMTVVRL 233 (283)
T ss_pred CCcchh----hccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhcccccccchhhh
Confidence 432110 01112223566799999999888999999999999999999999998654321111000 00 00001
Q ss_pred hhhcc-CCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhh
Q 003158 739 FSVID-GNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIW 786 (843)
Q Consensus 739 ~~~~~-~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~ 786 (843)
....+ ....+.+..++..+.+++.+||+.+|.+||+++++++.|+++.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~~ 282 (283)
T cd05080 234 IELLERGMRLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEMH 282 (283)
T ss_pred hhhhhcCCCCCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHhh
Confidence 11111 1122335566789999999999999999999999999998764
No 206
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=100.00 E-value=5.7e-36 Score=318.43 Aligned_cols=255 Identities=27% Similarity=0.433 Sum_probs=200.5
Q ss_pred CCCCCcccccCCeeEEEEEeCC-Cc--EEEEEEeccC--ChhhHHHHHHHHHHHHhccCCcccceeeeeecC------Cc
Q 003158 513 FNSSTQIGQGGYGKVYKGILPD-GT--VVAVKRAQEG--SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE------GE 581 (843)
Q Consensus 513 ~~~~~~lg~G~~g~Vy~~~~~~-~~--~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~------~~ 581 (843)
|.+.+.||+|+||.||+|.+.+ +. .||+|.++.. .....+.+.+|+++++.++|+||+++++++... ..
T Consensus 1 ~~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 80 (272)
T cd05075 1 LALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPS 80 (272)
T ss_pred CccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCC
Confidence 3467889999999999999754 33 6899988753 233456788999999999999999999987432 25
Q ss_pred EEEEEecCCCCCHHHHHhhc----CCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeecc
Q 003158 582 QMLVYEFMSNGTLRDQLSAK----SKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFG 657 (843)
Q Consensus 582 ~~lV~e~~~~gsL~~~l~~~----~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfG 657 (843)
.++||||+++|+|.+++... ....+++..+..++.|++.||+|||+++ |+||||||+||++++++.+||+|||
T Consensus 81 ~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg 157 (272)
T cd05075 81 PVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKS---FIHRDLAARNCMLNENMNVCVADFG 157 (272)
T ss_pred cEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCC---eeccccchhheEEcCCCCEEECCCC
Confidence 68999999999999987432 2345789999999999999999999998 9999999999999999999999999
Q ss_pred ccccCCCCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHh-CCCCCCCCcchHHHHHHHhhcc
Q 003158 658 LSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSS 736 (843)
Q Consensus 658 la~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~ellt-g~~pf~~~~~~~~~~~~~~~~~ 736 (843)
+++....... ........+++.|+|||...+..++.++|||||||++|||++ |+.||..... .+...
T Consensus 158 ~~~~~~~~~~-----~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~-~~~~~------ 225 (272)
T cd05075 158 LSKKIYNGDY-----YRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVEN-SEIYD------ 225 (272)
T ss_pred cccccCcccc-----eecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCH-HHHHH------
Confidence 9986543221 011122345678999999999999999999999999999999 7888865432 11111
Q ss_pred cchhhccCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHh
Q 003158 737 MMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 785 (843)
Q Consensus 737 ~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~ 785 (843)
.+..+.....+..++..+.+++.+||+.+|++||++.++++.|+.+
T Consensus 226 ---~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~~ 271 (272)
T cd05075 226 ---YLRQGNRLKQPPDCLDGLYSLMSSCWLLNPKDRPSFETLRCELEKA 271 (272)
T ss_pred ---HHHcCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 1112222233445677899999999999999999999999998864
No 207
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.3e-38 Score=311.79 Aligned_cols=271 Identities=22% Similarity=0.314 Sum_probs=220.9
Q ss_pred HcCCCCCCcccccCCeeEEEEEe-CCCcEEEEEEeccCChhhHH---HHHHHHHHHHhccCCcccceeeeeecCCcEEEE
Q 003158 510 TNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQGEK---EFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLV 585 (843)
Q Consensus 510 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~---~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV 585 (843)
.++|+.+++||+|.||+|-.++- ..++.+|+|++++....... .-..|-++|+..+||.+..+.-.|+..+.+|+|
T Consensus 167 m~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlCFV 246 (516)
T KOG0690|consen 167 MEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLCFV 246 (516)
T ss_pred cchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEEEE
Confidence 46778889999999999999995 47999999999876544433 346788999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCC
Q 003158 586 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVP 665 (843)
Q Consensus 586 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~ 665 (843)
|||..||.|.-++.+. ..+++...+.+...|..||.|||+++ ||.||||.+|.|+|.+|.+||+|||+++.-.
T Consensus 247 MeyanGGeLf~HLsre--r~FsE~RtRFYGaEIvsAL~YLHs~~---ivYRDlKLENLlLDkDGHIKitDFGLCKE~I-- 319 (516)
T KOG0690|consen 247 MEYANGGELFFHLSRE--RVFSEDRTRFYGAEIVSALGYLHSRN---IVYRDLKLENLLLDKDGHIKITDFGLCKEEI-- 319 (516)
T ss_pred EEEccCceEeeehhhh--hcccchhhhhhhHHHHHHhhhhhhCC---eeeeechhhhheeccCCceEeeecccchhcc--
Confidence 9999999999988664 35888888899999999999999998 9999999999999999999999999997432
Q ss_pred CCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhccCC
Q 003158 666 DIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGN 745 (843)
Q Consensus 666 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 745 (843)
.........+|||.|+|||++....|+.++|+|.+||++|||++|+.||...++
T Consensus 320 -----~~g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh--------------------- 373 (516)
T KOG0690|consen 320 -----KYGDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDH--------------------- 373 (516)
T ss_pred -----cccceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccch---------------------
Confidence 224456678999999999999999999999999999999999999999975432
Q ss_pred CCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCC-----CCccCCCC
Q 003158 746 MGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPP-----SSSSMLKH 820 (843)
Q Consensus 746 ~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~-----sa~e~L~H 820 (843)
+.+.++|..|=-+-| ...++++..++..+|..||++|. .|.|+.+|
T Consensus 374 ---------~kLFeLIl~ed~kFP--------------------r~ls~eAktLLsGLL~kdP~kRLGgGpdDakEi~~h 424 (516)
T KOG0690|consen 374 ---------EKLFELILMEDLKFP--------------------RTLSPEAKTLLSGLLKKDPKKRLGGGPDDAKEIMRH 424 (516)
T ss_pred ---------hHHHHHHHhhhccCC--------------------ccCCHHHHHHHHHHhhcChHhhcCCCchhHHHHHhh
Confidence 223333333211111 12234445667777777888885 46889999
Q ss_pred CcccCCCCCCccccccCCCCCC
Q 003158 821 PYVSSDVSGSNLVSGVIPTITP 842 (843)
Q Consensus 821 p~f~~~~~~~~~~~~~~~~~~~ 842 (843)
+||.+..+.-...-...|||+|
T Consensus 425 ~FF~~v~W~~~~~Kki~PPfKP 446 (516)
T KOG0690|consen 425 RFFASVDWEATYRKKIEPPFKP 446 (516)
T ss_pred hhhccCCHHHHHHhccCCCCCC
Confidence 9999988876666678888888
No 208
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=100.00 E-value=4.9e-36 Score=321.19 Aligned_cols=267 Identities=28% Similarity=0.435 Sum_probs=206.0
Q ss_pred cCCCCCCcccccCCeeEEEEEe-----CCCcEEEEEEeccCChhhHHHHHHHHHHHHhccCCcccceeeeeec--CCcEE
Q 003158 511 NNFNSSTQIGQGGYGKVYKGIL-----PDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDE--EGEQM 583 (843)
Q Consensus 511 ~~~~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~--~~~~~ 583 (843)
.+|++.+.||+|+||+||+|.. .+++.||+|.+........+.+.+|+++++.++||||+++++++.. ....+
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 83 (284)
T cd05081 4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLR 83 (284)
T ss_pred ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCceE
Confidence 4788889999999999999974 2578999999987666666789999999999999999999998743 35689
Q ss_pred EEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCC
Q 003158 584 LVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAP 663 (843)
Q Consensus 584 lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~ 663 (843)
+||||+++|+|.+++.... ..+++..++.++.|++.||+|||+++ |+||||||+||++++++.+||+|||+++...
T Consensus 84 lv~e~~~~~~L~~~l~~~~-~~l~~~~~~~~~~~l~~aL~~LH~~~---i~H~dlkp~nili~~~~~~~l~dfg~~~~~~ 159 (284)
T cd05081 84 LVMEYLPYGSLRDYLQKHR-ERLDHRKLLLYASQICKGMEYLGSKR---YVHRDLATRNILVESENRVKIGDFGLTKVLP 159 (284)
T ss_pred EEEEecCCCCHHHHHHhcC-cCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCCHhhEEECCCCeEEECCCccccccc
Confidence 9999999999999996542 35889999999999999999999998 9999999999999999999999999998764
Q ss_pred CCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCcchH-HHHHHHhh-c---ccc
Q 003158 664 VPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIV-REVNIAYQ-S---SMM 738 (843)
Q Consensus 664 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~-~~~~~~~~-~---~~~ 738 (843)
..... ........++..|+|||++.+..++.++|||||||++|||++|..++....... +....... . ..+
T Consensus 160 ~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (284)
T cd05081 160 QDKEY----YKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQGQMIVYHL 235 (284)
T ss_pred CCCcc----eeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchhhhhhcccccccccchHHH
Confidence 32110 001111223456999999998899999999999999999999877764332110 00000000 0 000
Q ss_pred hhhc-cCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHh
Q 003158 739 FSVI-DGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 785 (843)
Q Consensus 739 ~~~~-~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~ 785 (843)
...+ .....+.+..++..+.+++.+||+.+|++||++.++++.|+.+
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~ 283 (284)
T cd05081 236 IELLKNNGRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEAI 283 (284)
T ss_pred HHHHhcCCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHhc
Confidence 1111 1112233455677899999999999999999999999998865
No 209
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=100.00 E-value=3.9e-36 Score=327.19 Aligned_cols=210 Identities=26% Similarity=0.354 Sum_probs=177.7
Q ss_pred cCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCChh---hHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEE
Q 003158 511 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ---GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 586 (843)
Q Consensus 511 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~ 586 (843)
++|+..+.||+|+||+||+|... +++.||+|.+...... ..+.+.+|+++++.++|+||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 80 (316)
T cd05574 1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVM 80 (316)
T ss_pred CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEE
Confidence 36888899999999999999975 5899999998754332 3467889999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCC
Q 003158 587 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 666 (843)
Q Consensus 587 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~ 666 (843)
||+.+++|.+++.......+++..++.++.|+++||+|||+.+ ++||||||+||+++.++.++|+|||++.......
T Consensus 81 e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~ 157 (316)
T cd05574 81 DYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLG---IVYRDLKPENILLHESGHIMLSDFDLSKQSDVEP 157 (316)
T ss_pred EecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHCC---eeccCCChHHeEEcCCCCEEEeecchhhcccccc
Confidence 9999999999997665567899999999999999999999998 9999999999999999999999999987653221
Q ss_pred CCCcc----------------------cceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCc
Q 003158 667 IEGIV----------------------PAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 723 (843)
Q Consensus 667 ~~~~~----------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~ 723 (843)
..... .........|+..|+|||++.+..++.++|||||||++|+|++|+.||....
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~ 236 (316)
T cd05574 158 PPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSN 236 (316)
T ss_pred cccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCc
Confidence 10000 0001123467889999999999889999999999999999999999996543
No 210
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=100.00 E-value=4.2e-36 Score=322.36 Aligned_cols=257 Identities=32% Similarity=0.503 Sum_probs=207.3
Q ss_pred HcCCCCCCcccccCCeeEEEEEeC------CCcEEEEEEeccCCh-hhHHHHHHHHHHHHhccCCcccceeeeeecCCcE
Q 003158 510 TNNFNSSTQIGQGGYGKVYKGILP------DGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQ 582 (843)
Q Consensus 510 ~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~ 582 (843)
.++|++.+.||+|+||.||+|... ++..||+|.+..... ...+++.+|+.++++++||||+++++++.+++..
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~~ 83 (288)
T cd05050 4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGKPM 83 (288)
T ss_pred hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCcc
Confidence 567899999999999999999853 467899999875432 3356789999999999999999999999999999
Q ss_pred EEEEecCCCCCHHHHHhhcC--------------------CCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCc
Q 003158 583 MLVYEFMSNGTLRDQLSAKS--------------------KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASN 642 (843)
Q Consensus 583 ~lV~e~~~~gsL~~~l~~~~--------------------~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~N 642 (843)
++||||+++|+|.+++.... ...+++..++.++.|++.||+|||+.+ ++||||||+|
T Consensus 84 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~---i~H~dl~p~n 160 (288)
T cd05050 84 CLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERK---FVHRDLATRN 160 (288)
T ss_pred EEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCC---eecccccHhh
Confidence 99999999999999996432 124678889999999999999999998 9999999999
Q ss_pred EEEcCCCcEEEeeccccccCCCCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHh-CCCCCCC
Q 003158 643 ILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISH 721 (843)
Q Consensus 643 ILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~ellt-g~~pf~~ 721 (843)
|++++++.++|+|||+++........ ........+..|+|||.+.+..++.++|||||||++|||++ |..||..
T Consensus 161 il~~~~~~~~l~dfg~~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~ 235 (288)
T cd05050 161 CLVGENMVVKIADFGLSRNIYSADYY-----KASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYG 235 (288)
T ss_pred eEecCCCceEECccccceecccCccc-----cccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCC
Confidence 99999999999999998754322110 11112234567999999999999999999999999999998 8888865
Q ss_pred CcchHHHHHHHhhcccchhhccCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 003158 722 GKNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELES 784 (843)
Q Consensus 722 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~ 784 (843)
... .+... .+..+.....+..++.++.+++.+||+.+|.+||++.++++.|++
T Consensus 236 ~~~-~~~~~---------~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~~ 288 (288)
T cd05050 236 MAH-EEVIY---------YVRDGNVLSCPDNCPLELYNLMRLCWSKLPSDRPSFASINRILQR 288 (288)
T ss_pred CCH-HHHHH---------HHhcCCCCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhhC
Confidence 432 11111 112222223345567889999999999999999999999998863
No 211
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=5.6e-39 Score=308.69 Aligned_cols=295 Identities=23% Similarity=0.333 Sum_probs=212.7
Q ss_pred cCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccC-Chh-hHHHHHHHHHHHHhccCCcccceeeeeec--------C
Q 003158 511 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEG-SLQ-GEKEFLTEIQFLSRLHHRNLVSLVGYCDE--------E 579 (843)
Q Consensus 511 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~-~~~-~~~~~~~E~~~l~~l~h~nIv~l~~~~~~--------~ 579 (843)
+.|+...+||+|.||.||+|+.. .|+.||+|+.--. ... -.....+|+++|..++|+|++.+++.|.. .
T Consensus 17 ~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r 96 (376)
T KOG0669|consen 17 SKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDR 96 (376)
T ss_pred hHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCccccc
Confidence 45666788999999999999965 5788999865421 111 23467899999999999999999998843 2
Q ss_pred CcEEEEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeecccc
Q 003158 580 GEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLS 659 (843)
Q Consensus 580 ~~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla 659 (843)
..+++||++|+. +|.-++... ...++..++.+++.++..||.|+|+.. |+|||+||+|+|++.+|.+||+|||+|
T Consensus 97 ~t~ylVf~~ceh-DLaGlLsn~-~vr~sls~Ikk~Mk~Lm~GL~~iHr~k---ilHRDmKaaNvLIt~dgilklADFGla 171 (376)
T KOG0669|consen 97 ATFYLVFDFCEH-DLAGLLSNR-KVRFSLSEIKKVMKGLMNGLYYIHRNK---ILHRDMKAANVLITKDGILKLADFGLA 171 (376)
T ss_pred ceeeeeHHHhhh-hHHHHhcCc-cccccHHHHHHHHHHHHHHHHHHHHhh---HHhhcccHhhEEEcCCceEEeeccccc
Confidence 358999999976 888888543 345888999999999999999999998 999999999999999999999999999
Q ss_pred ccCCCCCCCCcccceeeeeecccCCccCchhccc-CCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccc
Q 003158 660 RLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMM 738 (843)
Q Consensus 660 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~ 738 (843)
+.+...+... ....+..+.|..|++||.+.+ ..|+++.|||+-||++.||+||.+-+....+ .+++..
T Consensus 172 r~fs~~~n~~---kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnte-qqql~~------- 240 (376)
T KOG0669|consen 172 RAFSTSKNVV---KPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTE-QQQLHL------- 240 (376)
T ss_pred cceecccccC---CCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChH-HHHHHH-------
Confidence 8765443221 222456677999999999997 5799999999999999999999776665443 222222
Q ss_pred hhhccCCCCCCCHHHHHHHHHHH-HHhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCCCCccC
Q 003158 739 FSVIDGNMGSYPSECVEKFIKLA-LKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSM 817 (843)
Q Consensus 739 ~~~~~~~~~~~~~~~~~~l~~l~-~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~sa~e~ 817 (843)
+....+....+.++.+.++- ..-++..|--.-+...+-..++ .+ ..++.+.|++.+||++||.+|+.|+++
T Consensus 241 ---Is~LcGs~tkevWP~~d~lpL~~sie~ePl~~~~~rkv~n~~k----p~-~kd~~a~dLle~ll~~DP~kR~~ad~a 312 (376)
T KOG0669|consen 241 ---ISQLCGSITKEVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLK----PY-VKDDEALDLLEKLLKLDPTKRIDADQA 312 (376)
T ss_pred ---HHHHhccCCcccCCCcccchHHHhccCCCCCcchhhhhhhhcc----cc-cCChhHHHHHHHHhccCcccCcchHhh
Confidence 11112222222222221110 0011112211112222222222 11 236678899999999999999999999
Q ss_pred CCCCcccCCCCC
Q 003158 818 LKHPYVSSDVSG 829 (843)
Q Consensus 818 L~Hp~f~~~~~~ 829 (843)
|+|.||..|..-
T Consensus 313 lnh~~F~kdp~p 324 (376)
T KOG0669|consen 313 LNHDFFWKDPMP 324 (376)
T ss_pred hchhhhhcCCcc
Confidence 999999887653
No 212
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=100.00 E-value=2.4e-36 Score=324.83 Aligned_cols=282 Identities=23% Similarity=0.379 Sum_probs=204.8
Q ss_pred HcCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCChhh-HHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEEe
Q 003158 510 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQG-EKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 587 (843)
Q Consensus 510 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e 587 (843)
+++|.+.+.||+|+||.||+|... +++.||+|++....... ...+.+|+++++.++|+||+++++++..++..++|||
T Consensus 4 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e 83 (291)
T cd07870 4 ATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVFE 83 (291)
T ss_pred cceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEEe
Confidence 468999999999999999999864 68999999987543222 3467889999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCC
Q 003158 588 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 667 (843)
Q Consensus 588 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~ 667 (843)
|+. +++.+++.... ..+.+..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||+++......
T Consensus 84 ~~~-~~l~~~~~~~~-~~~~~~~~~~~~~qi~~~L~~lH~~~---i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~- 157 (291)
T cd07870 84 YMH-TDLAQYMIQHP-GGLHPYNVRLFMFQLLRGLAYIHGQH---ILHRDLKPQNLLISYLGELKLADFGLARAKSIPS- 157 (291)
T ss_pred ccc-CCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCChHHEEEcCCCcEEEeccccccccCCCC-
Confidence 995 68877765432 34678888899999999999999998 9999999999999999999999999987543221
Q ss_pred CCcccceeeeeecccCCccCchhccc-CCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhccCCC
Q 003158 668 EGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNM 746 (843)
Q Consensus 668 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 746 (843)
.......++..|+|||.+.+ ..++.++|||||||++|||++|+.||.......+.....+. . .
T Consensus 158 ------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~------~----~ 221 (291)
T cd07870 158 ------QTYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWT------V----L 221 (291)
T ss_pred ------CCCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHH------H----c
Confidence 11122346889999999876 45788999999999999999999999765443332222110 0 0
Q ss_pred CCCCHHHHHHHHHHHH---HhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCCCCccCCCCCcc
Q 003158 747 GSYPSECVEKFIKLAL---KCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYV 823 (843)
Q Consensus 747 ~~~~~~~~~~l~~l~~---~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~sa~e~L~Hp~f 823 (843)
+.........+..+-. ..+... .++... ....... ......+++.+|+..||++|+|++|++.||||
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-------~~~~~~~-~~~~~~~ll~~~l~~dp~~R~t~~~~l~h~~~ 291 (291)
T cd07870 222 GVPTEDTWPGVSKLPNYKPEWFLPC--KPQQLR-------VVWKRLS-RPPKAEDLASQMLMMFPKDRISAQDALLHPYF 291 (291)
T ss_pred CCCChhhhhhhhhcccccchhcccc--CCcchh-------hhccccC-CChHHHHHHHHHhCcCcccCcCHHHHhcCCCC
Confidence 0011111111110000 000000 011111 1111111 13455689999999999999999999999998
No 213
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=100.00 E-value=4.9e-36 Score=329.91 Aligned_cols=262 Identities=26% Similarity=0.432 Sum_probs=205.2
Q ss_pred HHcCCCCCCcccccCCeeEEEEEe------CCCcEEEEEEeccCCh-hhHHHHHHHHHHHHhc-cCCcccceeeeeecC-
Q 003158 509 ATNNFNSSTQIGQGGYGKVYKGIL------PDGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEE- 579 (843)
Q Consensus 509 ~~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~- 579 (843)
..++|++.+.||+|+||+||+|.+ .+++.||||+++.... .....+.+|+.++.++ +|+||+++++++...
T Consensus 5 ~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~ 84 (343)
T cd05103 5 PRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPG 84 (343)
T ss_pred chhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCC
Confidence 456899999999999999999973 3478999999975432 2345788999999999 689999999988654
Q ss_pred CcEEEEEecCCCCCHHHHHhhcC---------------------------------------------------------
Q 003158 580 GEQMLVYEFMSNGTLRDQLSAKS--------------------------------------------------------- 602 (843)
Q Consensus 580 ~~~~lV~e~~~~gsL~~~l~~~~--------------------------------------------------------- 602 (843)
...++||||+++|+|.+++....
T Consensus 85 ~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (343)
T cd05103 85 GPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEE 164 (343)
T ss_pred CceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhh
Confidence 56799999999999999986432
Q ss_pred --------CCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCCCCcccce
Q 003158 603 --------KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAH 674 (843)
Q Consensus 603 --------~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~ 674 (843)
...+++..+..++.||++||+|||+++ |+||||||+||++++++.+||+|||++........ ..
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~-----~~ 236 (343)
T cd05103 165 EAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASRK---CIHRDLAARNILLSENNVVKICDFGLARDIYKDPD-----YV 236 (343)
T ss_pred hhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCccCeEEEcCCCcEEEEecccccccccCcc-----hh
Confidence 123677888899999999999999998 99999999999999999999999999976432110 01
Q ss_pred eeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHh-CCCCCCCCcchHHHHHHHhhcccchhhccCCCCCCCHHH
Q 003158 675 VSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSEC 753 (843)
Q Consensus 675 ~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 753 (843)
......++..|+|||.+.+..++.++|||||||++|||++ |..||......... ... +..+.....|...
T Consensus 237 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~-~~~--------~~~~~~~~~~~~~ 307 (343)
T cd05103 237 RKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF-CRR--------LKEGTRMRAPDYT 307 (343)
T ss_pred hcCCCCCCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHHH-HHH--------HhccCCCCCCCCC
Confidence 1112335678999999999899999999999999999997 88998654321111 111 1111222233334
Q ss_pred HHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhh
Q 003158 754 VEKFIKLALKCCQDETDARPSMSEVMRELESIWN 787 (843)
Q Consensus 754 ~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~ 787 (843)
.+++.+++..||+.+|.+||++.++++.|+.+.+
T Consensus 308 ~~~~~~~~~~cl~~~p~~Rps~~eil~~l~~~~~ 341 (343)
T cd05103 308 TPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 341 (343)
T ss_pred CHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 5678999999999999999999999999998754
No 214
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=100.00 E-value=5.5e-36 Score=351.13 Aligned_cols=270 Identities=25% Similarity=0.357 Sum_probs=208.9
Q ss_pred cCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCC---hhhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEE
Q 003158 511 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 586 (843)
Q Consensus 511 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~ 586 (843)
++|++.++||+|+||.||+|... +++.||+|++.... ....+++.+|++++++++||||+++++++.+.+..++||
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVM 81 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTM 81 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEE
Confidence 57899999999999999999965 68999999987532 223467899999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcC---------CCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeecc
Q 003158 587 EFMSNGTLRDQLSAKS---------KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFG 657 (843)
Q Consensus 587 e~~~~gsL~~~l~~~~---------~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfG 657 (843)
||++||+|.+++.... ....++..++.++.||++||+|||+.+ |+||||||+||+++.++.+||+|||
T Consensus 82 EY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~G---IIHRDLKPeNILLd~dg~vKLiDFG 158 (932)
T PRK13184 82 PYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKG---VLHRDLKPDNILLGLFGEVVILDWG 158 (932)
T ss_pred EcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCC---ccccCCchheEEEcCCCCEEEEecC
Confidence 9999999999986421 123556778899999999999999998 9999999999999999999999999
Q ss_pred ccccCCCCCCCCc-----------ccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCcchH
Q 003158 658 LSRLAPVPDIEGI-----------VPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIV 726 (843)
Q Consensus 658 la~~~~~~~~~~~-----------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~ 726 (843)
+++.......... ..........||+.|+|||++.+..++.++|||||||++|||+||+.||.......
T Consensus 159 LAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~k 238 (932)
T PRK13184 159 AAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKGRK 238 (932)
T ss_pred cceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcchhh
Confidence 9986622110000 00011123469999999999999999999999999999999999999997533211
Q ss_pred HHHHHHhhcccchhhccCCCCCCCHHHHHHHHHHHHHhcccCCCCCC-CHHHHHHHHHHhhhhCCC
Q 003158 727 REVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARP-SMSEVMRELESIWNMMPE 791 (843)
Q Consensus 727 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RP-s~~~vl~~L~~~~~~~~~ 791 (843)
.... . ....+.......+.+..+.+++.+|+..+|++|| +++++.+.|+.+....++
T Consensus 239 i~~~-----~---~i~~P~~~~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~~lq~~p~ 296 (932)
T PRK13184 239 ISYR-----D---VILSPIEVAPYREIPPFLSQIAMKALAVDPAERYSSVQELKQDLEPHLQGSPE 296 (932)
T ss_pred hhhh-----h---hccChhhccccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhcCcc
Confidence 0000 0 0111111111234567788999999999999995 667788888887654443
No 215
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=100.00 E-value=2.3e-36 Score=324.76 Aligned_cols=198 Identities=26% Similarity=0.438 Sum_probs=174.5
Q ss_pred cCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCCh---hhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEE
Q 003158 511 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 586 (843)
Q Consensus 511 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~ 586 (843)
++|++.+.||+|+||.||++... +++.||+|.+..... ...+.+.+|++++++++||||+++++++.+++..++||
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 80 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVM 80 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEE
Confidence 46888999999999999999965 689999999875322 23457889999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCC
Q 003158 587 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 666 (843)
Q Consensus 587 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~ 666 (843)
||+++++|.+++... ..+++..+..++.|+++||.|||+.+ |+||||+|+||++++++.+||+|||++......
T Consensus 81 e~~~~~~L~~~~~~~--~~l~~~~~~~~~~qil~~l~~lH~~~---i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~- 154 (290)
T cd05580 81 EYVPGGELFSHLRKS--GRFPEPVARFYAAQVVLALEYLHSLD---IVYRDLKPENLLLDSDGYIKITDFGFAKRVKGR- 154 (290)
T ss_pred ecCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCCHHHEEECCCCCEEEeeCCCccccCCC-
Confidence 999999999999765 45888999999999999999999998 999999999999999999999999998765422
Q ss_pred CCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCc
Q 003158 667 IEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 723 (843)
Q Consensus 667 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~ 723 (843)
.....+++.|+|||.+.+..++.++||||||+++|+|++|+.||....
T Consensus 155 ---------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~ 202 (290)
T cd05580 155 ---------TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDN 202 (290)
T ss_pred ---------CCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCC
Confidence 123458899999999988888999999999999999999999997544
No 216
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=100.00 E-value=9.3e-36 Score=315.88 Aligned_cols=257 Identities=24% Similarity=0.377 Sum_probs=209.7
Q ss_pred cCCCCCCcccccCCeeEEEEEe-CCCcEEEEEEeccCC---hhhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEE
Q 003158 511 NNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 586 (843)
Q Consensus 511 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~ 586 (843)
++|++.+.||+|+||.||+|.. .+++.||||.+.... ....+++.+|+++++.++|+||+++++++.+++..++||
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL 81 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEE
Confidence 4678889999999999999995 578999999876422 223467889999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhh--cCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCC
Q 003158 587 EFMSNGTLRDQLSA--KSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPV 664 (843)
Q Consensus 587 e~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~ 664 (843)
||+++++|.+++.. .....+++..++.++.|+++||.|||+++ ++|+||||+||+++.++.++|+|||++.....
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~ 158 (267)
T cd08229 82 ELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRR---VMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred EecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCCEEECcchhhhcccc
Confidence 99999999999864 22346889999999999999999999999 99999999999999999999999999876542
Q ss_pred CCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhccC
Q 003158 665 PDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDG 744 (843)
Q Consensus 665 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 744 (843)
.. .......++..|+|||.+.+..++.++||||||+++|||++|..||............ .+...
T Consensus 159 ~~-------~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~--------~~~~~ 223 (267)
T cd08229 159 KT-------TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCK--------KIEQC 223 (267)
T ss_pred CC-------cccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccchHHHHhh--------hhhcC
Confidence 21 1112345888999999999888999999999999999999999999654321111111 11111
Q ss_pred CCCC-CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHh
Q 003158 745 NMGS-YPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 785 (843)
Q Consensus 745 ~~~~-~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~ 785 (843)
..+. .+..+++.+.+++.+||..+|++||++.++++.++++
T Consensus 224 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~~~ 265 (267)
T cd08229 224 DYPPLPSDHYSEELRQLVNMCINPDPEKRPDITYVYDVAKRM 265 (267)
T ss_pred CCCCCCcccccHHHHHHHHHhcCCCcccCCCHHHHHHHHhhh
Confidence 1222 2345778899999999999999999999999988865
No 217
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=4.2e-36 Score=318.61 Aligned_cols=253 Identities=22% Similarity=0.308 Sum_probs=193.1
Q ss_pred HcCCCCCCcccccCCeeEEEEEe-CCCcEEEEEEeccCChhhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEEec
Q 003158 510 TNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 588 (843)
Q Consensus 510 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e~ 588 (843)
.++|++.+.||+|+||.||+|+. .+++.||+|++..........+.+|+.++++++||||+++++++...+..++||||
T Consensus 8 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~e~ 87 (267)
T cd06646 8 QHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICMEY 87 (267)
T ss_pred hhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEeC
Confidence 35789999999999999999996 47899999998765444456788999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCCC
Q 003158 589 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 668 (843)
Q Consensus 589 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 668 (843)
+++++|.++++.. .++++..+..++.|+++||.|||+.+ |+||||||+||++++++.+||+|||++.......
T Consensus 88 ~~~~~L~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~-- 160 (267)
T cd06646 88 CGGGSLQDIYHVT--GPLSELQIAYVCRETLQGLAYLHSKG---KMHRDIKGANILLTDNGDVKLADFGVAAKITATI-- 160 (267)
T ss_pred CCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEECCCCCEEECcCccceeecccc--
Confidence 9999999998654 35788999999999999999999998 9999999999999999999999999997653211
Q ss_pred CcccceeeeeecccCCccCchhcc---cCCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhccCC
Q 003158 669 GIVPAHVSTVVKGTPGYLDPEYFL---THKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGN 745 (843)
Q Consensus 669 ~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 745 (843)
.......|+..|+|||.+. ...++.++|||||||++|||++|+.||........... . ........
T Consensus 161 -----~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~~----~--~~~~~~~~ 229 (267)
T cd06646 161 -----AKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFL----M--SKSNFQPP 229 (267)
T ss_pred -----cccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhhee----e--ecCCCCCC
Confidence 1112345788999999985 34578899999999999999999999864432111000 0 00000000
Q ss_pred CCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 003158 746 MGSYPSECVEKFIKLALKCCQDETDARPSMSEVMR 780 (843)
Q Consensus 746 ~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~ 780 (843)
.......++..+.+++.+||..+|++||+++++++
T Consensus 230 ~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 264 (267)
T cd06646 230 KLKDKTKWSSTFHNFVKISLTKNPKKRPTAERLLT 264 (267)
T ss_pred CCccccccCHHHHHHHHHHhhCChhhCcCHHHHhc
Confidence 00111223455666666666666666666666553
No 218
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-37 Score=330.88 Aligned_cols=260 Identities=23% Similarity=0.393 Sum_probs=206.2
Q ss_pred cCCCCCCcccccCCeeEEEEEeCC-CcEEEEEEeccCChhhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEEecC
Q 003158 511 NNFNSSTQIGQGGYGKVYKGILPD-GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFM 589 (843)
Q Consensus 511 ~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e~~ 589 (843)
+-|.++..||.|+||+||+|..++ +-..|.|++...+.+...+|.-||+||....||+||++++.|..++.+|++.|||
T Consensus 32 d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliEFC 111 (1187)
T KOG0579|consen 32 DHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIEFC 111 (1187)
T ss_pred HHHHHHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEeec
Confidence 345567789999999999999654 5566788888777777789999999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCCCC
Q 003158 590 SNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEG 669 (843)
Q Consensus 590 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~ 669 (843)
.||-.+.++-.-+ .++.+.++..++.|++.||.|||++. |||||||+.|||++-+|.++|+|||.+.....
T Consensus 112 ~GGAVDaimlEL~-r~LtE~QIqvvc~q~ldALn~LHs~~---iIHRDLKAGNiL~TldGdirLADFGVSAKn~~----- 182 (1187)
T KOG0579|consen 112 GGGAVDAIMLELG-RVLTEDQIQVVCYQVLDALNWLHSQN---IIHRDLKAGNILLTLDGDIRLADFGVSAKNKS----- 182 (1187)
T ss_pred CCchHhHHHHHhc-cccchHHHHHHHHHHHHHHHHHhhcc---hhhhhccccceEEEecCcEeeecccccccchh-----
Confidence 9999999886643 46899999999999999999999999 99999999999999999999999999864321
Q ss_pred cccceeeeeecccCCccCchhccc-----CCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhccC
Q 003158 670 IVPAHVSTVVKGTPGYLDPEYFLT-----HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDG 744 (843)
Q Consensus 670 ~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 744 (843)
.........|||+|||||+.+. .+|++++||||||++|.||..+.+|...-....- + ..+...
T Consensus 183 --t~qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpMRV-l---------lKiaKS 250 (1187)
T KOG0579|consen 183 --TRQKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPMRV-L---------LKIAKS 250 (1187)
T ss_pred --HHhhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccchHHH-H---------HHHhhc
Confidence 1233456789999999999864 5799999999999999999999888754332111 0 011111
Q ss_pred CCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCCCCccCCCCCccc
Q 003158 745 NMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVS 824 (843)
Q Consensus 745 ~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~sa~e~L~Hp~f~ 824 (843)
+| |+.. ....++..+.||+.++|.-||..||+|+|+|+||||+
T Consensus 251 -----------------------eP---PTLl-----------qPS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~Hpfv~ 293 (1187)
T KOG0579|consen 251 -----------------------EP---PTLL-----------QPSHWSRSFSDFLKRCLVKNPRNRPPAAQLLKHPFVQ 293 (1187)
T ss_pred -----------------------CC---Cccc-----------CcchhhhHHHHHHHHHHhcCCccCCCHHHHhhCcccc
Confidence 11 1111 1123344455677777777888888999999999998
Q ss_pred CCCC
Q 003158 825 SDVS 828 (843)
Q Consensus 825 ~~~~ 828 (843)
+...
T Consensus 294 ~~~S 297 (1187)
T KOG0579|consen 294 NAPS 297 (1187)
T ss_pred cCCc
Confidence 6544
No 219
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=100.00 E-value=2.4e-36 Score=322.39 Aligned_cols=267 Identities=23% Similarity=0.332 Sum_probs=204.0
Q ss_pred ccccCCeeEEEEEeC-CCcEEEEEEeccCCh---hhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEEecCCCCCH
Q 003158 519 IGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTL 594 (843)
Q Consensus 519 lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e~~~~gsL 594 (843)
||+|+||+||+|... +|+.||+|.+..... ...+.+.+|+++++.++||||+++++++...+..++||||+++++|
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL 80 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence 699999999999854 689999999865322 2244667899999999999999999999999999999999999999
Q ss_pred HHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCCCCcccce
Q 003158 595 RDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAH 674 (843)
Q Consensus 595 ~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~ 674 (843)
.+++.......+++..++.++.|++.||.|||+.+ ++||||+|+||++++++.++|+|||.+...... .
T Consensus 81 ~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~---i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~--------~ 149 (277)
T cd05577 81 KYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRR---IVYRDLKPENVLLDDHGNVRISDLGLAVELKGG--------K 149 (277)
T ss_pred HHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEECCCCCEEEccCcchhhhccC--------C
Confidence 99997766557899999999999999999999999 999999999999999999999999998765321 1
Q ss_pred eeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhccCCCCCCCHHHH
Q 003158 675 VSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECV 754 (843)
Q Consensus 675 ~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 754 (843)
......++..|+|||.+.+..++.++|||||||++|+|++|+.||............ ...........+..
T Consensus 150 ~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~-------~~~~~~~~~~~~~~-- 220 (277)
T cd05577 150 KIKGRAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEEL-------KRRTLEMAVEYPDK-- 220 (277)
T ss_pred ccccccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccHHHH-------HhccccccccCCcc--
Confidence 112345778999999999888999999999999999999999999654321100000 00000000001111
Q ss_pred HHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCC-----CCccCCCCCcccCCCCC
Q 003158 755 EKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPP-----SSSSMLKHPYVSSDVSG 829 (843)
Q Consensus 755 ~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~-----sa~e~L~Hp~f~~~~~~ 829 (843)
.++...+++.+||+.||++|+ ++.++++||||....+.
T Consensus 221 -------------------------------------~~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~h~~~~~~~~~ 263 (277)
T cd05577 221 -------------------------------------FSPEAKDLCEALLQKDPEKRLGCRGGSADEVREHPLFKDLNWR 263 (277)
T ss_pred -------------------------------------CCHHHHHHHHHHccCChhHccCCCcccHHHHHhChhhhcCChh
Confidence 123334677777777888888 77779999999876664
Q ss_pred CccccccCCCCCC
Q 003158 830 SNLVSGVIPTITP 842 (843)
Q Consensus 830 ~~~~~~~~~~~~~ 842 (843)
.-.....+|++.|
T Consensus 264 ~~~~~~~~~~~~~ 276 (277)
T cd05577 264 RLEAGMLEPPFIP 276 (277)
T ss_pred hhhcCCCCCCCCC
Confidence 3333334566654
No 220
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=100.00 E-value=3.9e-36 Score=325.01 Aligned_cols=257 Identities=29% Similarity=0.476 Sum_probs=204.6
Q ss_pred HcCCCCCCcccccCCeeEEEEEeC-CCc--EEEEEEeccCC-hhhHHHHHHHHHHHHhc-cCCcccceeeeeecCCcEEE
Q 003158 510 TNNFNSSTQIGQGGYGKVYKGILP-DGT--VVAVKRAQEGS-LQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQML 584 (843)
Q Consensus 510 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~--~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~l 584 (843)
.++|++.+.||+|+||.||+|.++ ++. .+|+|.++... ....+++.+|++++.++ +|+||+++++++.+++..++
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~l 85 (303)
T cd05088 6 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYL 85 (303)
T ss_pred hhhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCceE
Confidence 357888899999999999999964 454 46888776432 33456788999999999 89999999999999999999
Q ss_pred EEecCCCCCHHHHHhhcC--------------CCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCc
Q 003158 585 VYEFMSNGTLRDQLSAKS--------------KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFT 650 (843)
Q Consensus 585 V~e~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~ 650 (843)
||||+++|+|.++++... ...+++..++.++.|+++||+|||+++ |+||||||+|||+++++.
T Consensus 86 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~g---i~H~dlkp~Nili~~~~~ 162 (303)
T cd05088 86 AIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ---FIHRDLAARNILVGENYV 162 (303)
T ss_pred EEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCC---ccccccchheEEecCCCc
Confidence 999999999999997542 125788899999999999999999998 999999999999999999
Q ss_pred EEEeeccccccCCCCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHh-CCCCCCCCcchHHHH
Q 003158 651 AKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREV 729 (843)
Q Consensus 651 ~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~ellt-g~~pf~~~~~~~~~~ 729 (843)
+||+|||++...... .......++..|+|||++.+..++.++|||||||++|||+| |..||...... +..
T Consensus 163 ~kl~dfg~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~-~~~ 233 (303)
T cd05088 163 AKIADFGLSRGQEVY--------VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA-ELY 233 (303)
T ss_pred EEeCccccCcccchh--------hhcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChH-HHH
Confidence 999999998642210 00111224567999999988889999999999999999998 99998654321 111
Q ss_pred HHHhhcccchhhccCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhh
Q 003158 730 NIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWN 787 (843)
Q Consensus 730 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~ 787 (843)
.. ...+.....+..++..+.+++.+||+.+|++||++.++++.++++..
T Consensus 234 ~~---------~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~~~ 282 (303)
T cd05088 234 EK---------LPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLE 282 (303)
T ss_pred HH---------HhcCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 11 11111122334456678999999999999999999999999988754
No 221
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=3.7e-36 Score=323.95 Aligned_cols=266 Identities=23% Similarity=0.361 Sum_probs=208.0
Q ss_pred cCCCCCCcccccCCeeEEEEEe-CCCcEEEEEEeccCChhhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEEecC
Q 003158 511 NNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFM 589 (843)
Q Consensus 511 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e~~ 589 (843)
.+|+..+.||.|+||.||+|.. .+++.||+|.+........+.+.+|+++++.++|+||+++++++...+..++||||+
T Consensus 19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 98 (296)
T cd06655 19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVMEYL 98 (296)
T ss_pred ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEEEec
Confidence 4688889999999999999985 578999999987655555677899999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCCCC
Q 003158 590 SNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEG 669 (843)
Q Consensus 590 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~ 669 (843)
++++|.+++... .+++..+..++.|++.||+|||+.+ ++||||||+||+++.++.+||+|||++.......
T Consensus 99 ~~~~L~~~~~~~---~l~~~~~~~i~~~l~~al~~LH~~~---i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~--- 169 (296)
T cd06655 99 AGGSLTDVVTET---CMDEAQIAAVCRECLQALEFLHANQ---VIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQ--- 169 (296)
T ss_pred CCCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEccCccchhccccc---
Confidence 999999998543 4789999999999999999999999 9999999999999999999999999987643221
Q ss_pred cccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhccCCCCCC
Q 003158 670 IVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSY 749 (843)
Q Consensus 670 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 749 (843)
.......++..|+|||.+.+..++.++|||||||++|+|++|+.||........... .... .......
T Consensus 170 ----~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~~~-~~~~-------~~~~~~~ 237 (296)
T cd06655 170 ----SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYL-IATN-------GTPELQN 237 (296)
T ss_pred ----ccCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH-HHhc-------CCcccCC
Confidence 111234578899999999988899999999999999999999999976543211110 0000 0000001
Q ss_pred CHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCCCCccCCCCCcccCCCCC
Q 003158 750 PSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSSDVSG 829 (843)
Q Consensus 750 ~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~sa~e~L~Hp~f~~~~~~ 829 (843)
+..++. ...+++.+|+..||++|+|+++++.||||..-...
T Consensus 238 ~~~~~~---------------------------------------~~~~li~~~l~~dp~~Rpt~~~il~~~~~~~~~~~ 278 (296)
T cd06655 238 PEKLSP---------------------------------------IFRDFLNRCLEMDVEKRGSAKELLQHPFLKLAKPL 278 (296)
T ss_pred cccCCH---------------------------------------HHHHHHHHHhhcChhhCCCHHHHhhChHhhhcccc
Confidence 111111 22346667777788888888888888888876665
Q ss_pred Ccccccc
Q 003158 830 SNLVSGV 836 (843)
Q Consensus 830 ~~~~~~~ 836 (843)
+.+..+.
T Consensus 279 ~~~~~~~ 285 (296)
T cd06655 279 SSLTPLI 285 (296)
T ss_pred ccCCccc
Confidence 5555443
No 222
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1e-35 Score=326.44 Aligned_cols=266 Identities=25% Similarity=0.480 Sum_probs=211.6
Q ss_pred HHHHHcCCCCCCcccccCCeeEEEEEeC--------CCcEEEEEEeccCC-hhhHHHHHHHHHHHHhc-cCCcccceeee
Q 003158 506 MALATNNFNSSTQIGQGGYGKVYKGILP--------DGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRL-HHRNLVSLVGY 575 (843)
Q Consensus 506 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~--------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~nIv~l~~~ 575 (843)
+.+...+|++.+.||+|+||.||+|... .+..||+|.+.... ....+++.+|+++++++ +|+||++++++
T Consensus 7 ~~~~~~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~ 86 (334)
T cd05100 7 WELSRTRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGA 86 (334)
T ss_pred cccCHhHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEE
Confidence 4455567999999999999999999742 12368999887533 23356789999999999 79999999999
Q ss_pred eecCCcEEEEEecCCCCCHHHHHhhcC--------------CCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCC
Q 003158 576 CDEEGEQMLVYEFMSNGTLRDQLSAKS--------------KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKAS 641 (843)
Q Consensus 576 ~~~~~~~~lV~e~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~ 641 (843)
|.+.+..++||||+++|+|.+++.... ...+++..+..++.|+++||+|||+++ |+||||||+
T Consensus 87 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~g---ivH~dlkp~ 163 (334)
T cd05100 87 CTQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQK---CIHRDLAAR 163 (334)
T ss_pred EccCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCC---eeccccccc
Confidence 999999999999999999999997532 234788889999999999999999998 999999999
Q ss_pred cEEEcCCCcEEEeeccccccCCCCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHh-CCCCCC
Q 003158 642 NILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPIS 720 (843)
Q Consensus 642 NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~ellt-g~~pf~ 720 (843)
||++++++.+||+|||+++....... ........++..|+|||++.+..++.++|||||||++|||++ |..||.
T Consensus 164 Nill~~~~~~kL~Dfg~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~ 238 (334)
T cd05100 164 NVLVTEDNVMKIADFGLARDVHNIDY-----YKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYP 238 (334)
T ss_pred eEEEcCCCcEEECCcccceecccccc-----cccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCC
Confidence 99999999999999999976542211 011122334567999999999999999999999999999998 888886
Q ss_pred CCcchHHHHHHHhhcccchhhccCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhC
Q 003158 721 HGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMM 789 (843)
Q Consensus 721 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~ 789 (843)
... ..+.... +..+.....+..++.++.+++.+||+.+|.+||++.+++..|+.+....
T Consensus 239 ~~~-~~~~~~~---------~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~~~~~ 297 (334)
T cd05100 239 GIP-VEELFKL---------LKEGHRMDKPANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRVLTVT 297 (334)
T ss_pred CCC-HHHHHHH---------HHcCCCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHhhhc
Confidence 543 2221111 1112222334556778999999999999999999999999999887533
No 223
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=100.00 E-value=7.4e-36 Score=316.73 Aligned_cols=258 Identities=28% Similarity=0.462 Sum_probs=206.9
Q ss_pred HcCCCCCCcccccCCeeEEEEEeC-C---CcEEEEEEeccCC-hhhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEE
Q 003158 510 TNNFNSSTQIGQGGYGKVYKGILP-D---GTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQML 584 (843)
Q Consensus 510 ~~~~~~~~~lg~G~~g~Vy~~~~~-~---~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~l 584 (843)
..+|++.+.||+|+||.||+|... + +..+|+|.++... ....+.+.+|+.++++++||||+++++++..++..++
T Consensus 3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 82 (267)
T cd05066 3 ASCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMI 82 (267)
T ss_pred HHHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEE
Confidence 357888999999999999999863 2 3479999987543 2335678999999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCC
Q 003158 585 VYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPV 664 (843)
Q Consensus 585 V~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~ 664 (843)
||||+++++|.+++.... ..+++..++.++.|++.||+|||+.+ ++||||||+||+++.++.++++|||++.....
T Consensus 83 v~e~~~~~~L~~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~---i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~ 158 (267)
T cd05066 83 VTEYMENGSLDAFLRKHD-GQFTVIQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILVNSNLVCKVSDFGLSRVLED 158 (267)
T ss_pred EEEcCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCC---EeehhhchhcEEECCCCeEEeCCCCccccccc
Confidence 999999999999997643 35788999999999999999999999 99999999999999999999999999987643
Q ss_pred CCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHh-CCCCCCCCcchHHHHHHHhhcccchhhcc
Q 003158 665 PDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVID 743 (843)
Q Consensus 665 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 743 (843)
.... ........++..|+|||.+.+..++.++|||||||++||+++ |..||...... +.... +.+
T Consensus 159 ~~~~----~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~-~~~~~---------~~~ 224 (267)
T cd05066 159 DPEA----AYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQ-DVIKA---------IEE 224 (267)
T ss_pred ccce----eeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHH-HHHHH---------HhC
Confidence 2110 011112223568999999999899999999999999999887 99999754321 11111 111
Q ss_pred CCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHh
Q 003158 744 GNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 785 (843)
Q Consensus 744 ~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~ 785 (843)
+...+.+..++..+.+++.+|++.+|.+||++.++++.|+++
T Consensus 225 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 266 (267)
T cd05066 225 GYRLPAPMDCPAALHQLMLDCWQKDRNERPKFEQIVSILDKL 266 (267)
T ss_pred CCcCCCCCCCCHHHHHHHHHHcccCchhCCCHHHHHHHHHhh
Confidence 111223445667889999999999999999999999998764
No 224
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=100.00 E-value=2.5e-36 Score=333.87 Aligned_cols=289 Identities=21% Similarity=0.313 Sum_probs=213.2
Q ss_pred HHcCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccC--ChhhHHHHHHHHHHHHhccCCcccceeeeeecC------
Q 003158 509 ATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEG--SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE------ 579 (843)
Q Consensus 509 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~------ 579 (843)
..++|+..+.||+|+||.||+|... +++.||+|.+... .....+++.+|+++++.++|+||+++++++...
T Consensus 14 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 93 (353)
T cd07850 14 VLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEF 93 (353)
T ss_pred hhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCcccc
Confidence 4578999999999999999999964 7899999998643 223345678899999999999999999988543
Q ss_pred CcEEEEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeecccc
Q 003158 580 GEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLS 659 (843)
Q Consensus 580 ~~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla 659 (843)
...++||||+. ++|.+.+... +++..+..++.|++.||+|||+++ |+||||||+||++++++.+||+|||++
T Consensus 94 ~~~~lv~e~~~-~~l~~~~~~~----l~~~~~~~~~~ql~~aL~~LH~~g---i~H~dlkp~Nil~~~~~~~kL~Dfg~~ 165 (353)
T cd07850 94 QDVYLVMELMD-ANLCQVIQMD----LDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLA 165 (353)
T ss_pred CcEEEEEeccC-CCHHHHHhhc----CCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEECCCCCEEEccCccc
Confidence 35799999995 5888887542 788889999999999999999999 999999999999999999999999999
Q ss_pred ccCCCCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccch
Q 003158 660 RLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMF 739 (843)
Q Consensus 660 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~ 739 (843)
+...... ......++..|+|||.+.+..++.++|||||||++|+|++|+.||...+.... ....
T Consensus 166 ~~~~~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~-~~~~------- 229 (353)
T cd07850 166 RTAGTSF--------MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQ-WNKI------- 229 (353)
T ss_pred eeCCCCC--------CCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHH-HHHH-------
Confidence 8654221 12234578899999999999999999999999999999999999976543222 2111
Q ss_pred hhccCCCCCCCHHHHHHHHHHHHHhcccCCCCCC-CHHHHHHHHHHhhhh---CCCCCCCCCccccCCCCCCCCCCCCCc
Q 003158 740 SVIDGNMGSYPSECVEKFIKLALKCCQDETDARP-SMSEVMRELESIWNM---MPESDTKTPEFINSEHTSKEETPPSSS 815 (843)
Q Consensus 740 ~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RP-s~~~vl~~L~~~~~~---~~~~~~~~~dll~~~L~~dp~~R~sa~ 815 (843)
....+..+.++...+...........+..++ .+.++.......... .......+.+++.+||++||++|||++
T Consensus 230 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ 306 (353)
T cd07850 230 ---IEQLGTPSDEFMSRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVD 306 (353)
T ss_pred ---HHhcCCCCHHHHHHhhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHH
Confidence 1112333445544444333333333332221 222221110000000 001123356899999999999999999
Q ss_pred cCCCCCccc
Q 003158 816 SMLKHPYVS 824 (843)
Q Consensus 816 e~L~Hp~f~ 824 (843)
|+|.||||.
T Consensus 307 eiL~~~~~~ 315 (353)
T cd07850 307 DALQHPYIN 315 (353)
T ss_pred HHhcChhHh
Confidence 999999986
No 225
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=100.00 E-value=2.3e-36 Score=328.88 Aligned_cols=284 Identities=24% Similarity=0.328 Sum_probs=205.1
Q ss_pred CCCCCCcccccCCeeEEEEEeC---CCcEEEEEEeccCC---hhhHHHHHHHHHHHHhccCCcccceeeeeecC--CcEE
Q 003158 512 NFNSSTQIGQGGYGKVYKGILP---DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE--GEQM 583 (843)
Q Consensus 512 ~~~~~~~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~--~~~~ 583 (843)
+|++.+.||+|+||.||+|... +++.||+|.+.... ....+.+.+|+.+++.++||||+++++++.+. +..+
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 80 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVY 80 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEE
Confidence 4778899999999999999964 47999999988632 22345678899999999999999999999887 7899
Q ss_pred EEEecCCCCCHHHHHhhcC---CCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcC----CCcEEEeec
Q 003158 584 LVYEFMSNGTLRDQLSAKS---KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDH----KFTAKVADF 656 (843)
Q Consensus 584 lV~e~~~~gsL~~~l~~~~---~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~----~~~~kl~Df 656 (843)
+||||++ +++.+++.... ...+++..++.++.|++.||.|||+.+ |+||||||+||+++. ++.+||+||
T Consensus 81 lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~h~dlkp~Nil~~~~~~~~~~~kl~Df 156 (316)
T cd07842 81 LLFDYAE-HDLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNW---VLHRDLKPANILVMGEGPERGVVKIGDL 156 (316)
T ss_pred EEEeCCC-cCHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCC---EeeCCCCHHHEEEcCCCCccceEEECCC
Confidence 9999996 47777765322 236889999999999999999999999 999999999999999 999999999
Q ss_pred cccccCCCCCCCCcccceeeeeecccCCccCchhccc-CCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhc
Q 003158 657 GLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQS 735 (843)
Q Consensus 657 Gla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~ 735 (843)
|++......... ........++..|+|||++.+ ..++.++|||||||++|||++|+.||.......... .
T Consensus 157 g~~~~~~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~-~---- 227 (316)
T cd07842 157 GLARLFNAPLKP----LADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKS-N---- 227 (316)
T ss_pred ccccccCCCccc----ccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCccccccc-c----
Confidence 999865432210 111223457889999999876 457899999999999999999999997543211000 0
Q ss_pred ccchhhccCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHH----------------HHHHHhhhhCCCCCCCCCcc
Q 003158 736 SMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVM----------------RELESIWNMMPESDTKTPEF 799 (843)
Q Consensus 736 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl----------------~~L~~~~~~~~~~~~~~~dl 799 (843)
......+.+++..+-...+..++.+.+.. ..+..........+....++
T Consensus 228 ---------------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (316)
T cd07842 228 ---------------PFQRDQLERIFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDL 292 (316)
T ss_pred ---------------hhHHHHHHHHHHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHH
Confidence 00001111111111111111111111000 01111111112445566789
Q ss_pred ccCCCCCCCCCCCCCccCCCCCcc
Q 003158 800 INSEHTSKEETPPSSSSMLKHPYV 823 (843)
Q Consensus 800 l~~~L~~dp~~R~sa~e~L~Hp~f 823 (843)
+.+||++||++|||++|+++||||
T Consensus 293 i~~~l~~~P~~Rps~~eil~~~~f 316 (316)
T cd07842 293 LRKLLEYDPTKRITAEEALEHPYF 316 (316)
T ss_pred HHHHhcCCcccCcCHHHHhcCCCC
Confidence 999999999999999999999998
No 226
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=100.00 E-value=1.9e-36 Score=328.59 Aligned_cols=287 Identities=25% Similarity=0.345 Sum_probs=207.9
Q ss_pred HcCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCChhh--HHHHHHHHHHHHhccCCcccceeeeeecC--CcEEE
Q 003158 510 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQG--EKEFLTEIQFLSRLHHRNLVSLVGYCDEE--GEQML 584 (843)
Q Consensus 510 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~nIv~l~~~~~~~--~~~~l 584 (843)
.++|++.+.||+|+||.||+|... +|+.||+|.+....... ...+.+|++++++++|+||+++++++... +..++
T Consensus 6 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 85 (309)
T cd07845 6 VTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIFL 85 (309)
T ss_pred ccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEEE
Confidence 457899999999999999999964 68999999987433222 33567899999999999999999998654 56899
Q ss_pred EEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCC
Q 003158 585 VYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPV 664 (843)
Q Consensus 585 V~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~ 664 (843)
||||++ ++|.+++.... ..+++..++.++.|+++||+|||+.+ ++||||||+||++++++.+||+|||++.....
T Consensus 86 v~e~~~-~~l~~~l~~~~-~~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~~ 160 (309)
T cd07845 86 VMEYCE-QDLASLLDNMP-TPFSESQVKCLMLQLLRGLQYLHENF---IIHRDLKVSNLLLTDKGCLKIADFGLARTYGL 160 (309)
T ss_pred EEecCC-CCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCCEEECccceeeecCC
Confidence 999996 58988886533 46899999999999999999999999 99999999999999999999999999986543
Q ss_pred CCCCCcccceeeeeecccCCccCchhccc-CCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhcc
Q 003158 665 PDIEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVID 743 (843)
Q Consensus 665 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 743 (843)
.. .......++..|+|||.+.+ ..++.++||||+||++|||++|+.||...... +.......
T Consensus 161 ~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~-~~~~~~~~--------- 223 (309)
T cd07845 161 PA-------KPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEI-EQLDLIIQ--------- 223 (309)
T ss_pred cc-------CCCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHH---------
Confidence 21 11122345788999999876 55789999999999999999999999755432 22111110
Q ss_pred CCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCCCCccCCCCCcc
Q 003158 744 GNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYV 823 (843)
Q Consensus 744 ~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~sa~e~L~Hp~f 823 (843)
..+......++.+..+........+.... ..+...++...+...||+.+||.+||++|+|++|+++||||
T Consensus 224 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h~~f 293 (309)
T cd07845 224 -LLGTPNESIWPGFSDLPLVGKFTLPKQPY---------NNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALESSYF 293 (309)
T ss_pred -hcCCCChhhchhhhcccccccccccCCCC---------CchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhcChhh
Confidence 01111111111111111100000010000 01111223335566789999999999999999999999999
Q ss_pred cCCCC
Q 003158 824 SSDVS 828 (843)
Q Consensus 824 ~~~~~ 828 (843)
.....
T Consensus 294 ~~~~~ 298 (309)
T cd07845 294 KEKPL 298 (309)
T ss_pred ccCCC
Confidence 75443
No 227
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=100.00 E-value=5.7e-37 Score=323.59 Aligned_cols=198 Identities=36% Similarity=0.588 Sum_probs=172.3
Q ss_pred CCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCChhhHH--HHHHHHHHHHhccCCcccceeeeeecCCcEEEEEecC
Q 003158 513 FNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEK--EFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFM 589 (843)
Q Consensus 513 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~--~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e~~ 589 (843)
|+..+.||+|+||+||++... +++.||+|++......... ...+|+.++++++||||+++++++.+....++||||+
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~ 80 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYC 80 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccccccccccccccccccccccccccc
Confidence 566789999999999999975 5779999999876544432 3456999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCCCC
Q 003158 590 SNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEG 669 (843)
Q Consensus 590 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~ 669 (843)
++++|.+++... ..+++..++.++.|+++||+|||+.+ |+|+||||+||++++++.++|+|||.+......
T Consensus 81 ~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~L~~Lh~~~---i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~~---- 151 (260)
T PF00069_consen 81 PGGSLQDYLQKN--KPLSEEEILKIAYQILEALAYLHSKG---IVHRDIKPENILLDENGEVKLIDFGSSVKLSEN---- 151 (260)
T ss_dssp TTEBHHHHHHHH--SSBBHHHHHHHHHHHHHHHHHHHHTT---EEESSBSGGGEEESTTSEEEESSGTTTEESTST----
T ss_pred cccccccccccc--cccccccccccccccccccccccccc---ccccccccccccccccccccccccccccccccc----
Confidence 999999999733 35899999999999999999999999 999999999999999999999999999754111
Q ss_pred cccceeeeeecccCCccCchhcc-cCCCCchhhhHHHHHHHHHHHhCCCCCCCC
Q 003158 670 IVPAHVSTVVKGTPGYLDPEYFL-THKLTDKSDVYSLGVVFLELLTGMQPISHG 722 (843)
Q Consensus 670 ~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~sDvwS~G~~l~elltg~~pf~~~ 722 (843)
........++..|+|||++. +..++.++||||+|+++|+|++|..||...
T Consensus 152 ---~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~ 202 (260)
T PF00069_consen 152 ---NENFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEES 202 (260)
T ss_dssp ---TSEBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTS
T ss_pred ---ccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 22334456889999999998 788999999999999999999999999765
No 228
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=100.00 E-value=1.4e-36 Score=327.72 Aligned_cols=283 Identities=27% Similarity=0.401 Sum_probs=208.9
Q ss_pred CCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCChh-----hHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEE
Q 003158 512 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ-----GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLV 585 (843)
Q Consensus 512 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-----~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV 585 (843)
+|+..+.||+|+||.||+|... +++.||+|.+...... ....+..|+++++.++|+||+++++++.+.+..++|
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLV 80 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEE
Confidence 4778889999999999999965 6899999998754332 245677899999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCC
Q 003158 586 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVP 665 (843)
Q Consensus 586 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~ 665 (843)
|||+ +|+|.+++.... ..+++..++.++.||++||.|||+++ |+||||||+||+++.++.++|+|||+++.....
T Consensus 81 ~e~~-~~~L~~~i~~~~-~~~~~~~~~~~~~qi~~al~~lH~~~---i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~ 155 (298)
T cd07841 81 FEFM-ETDLEKVIKDKS-IVLTPADIKSYMLMTLRGLEYLHSNW---ILHRDLKPNNLLIASDGVLKLADFGLARSFGSP 155 (298)
T ss_pred Eccc-CCCHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHhCC---eeecCCChhhEEEcCCCCEEEccceeeeeccCC
Confidence 9999 899999997644 36899999999999999999999999 999999999999999999999999999865432
Q ss_pred CCCCcccceeeeeecccCCccCchhccc-CCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhccC
Q 003158 666 DIEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDG 744 (843)
Q Consensus 666 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 744 (843)
. .......+++.|+|||.+.+ ..++.++|||||||++|||++|..||....+. +....... .
T Consensus 156 ~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~-~~~~~~~~------~--- 218 (298)
T cd07841 156 N-------RKMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDI-DQLGKIFE------A--- 218 (298)
T ss_pred C-------ccccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccH-HHHHHHHH------H---
Confidence 1 11122346788999999865 46788999999999999999997776544332 21111110 0
Q ss_pred CCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCCCCccCCCCCccc
Q 003158 745 NMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVS 824 (843)
Q Consensus 745 ~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~sa~e~L~Hp~f~ 824 (843)
..............+...+.. ...+... ....+........+++.+|+..||++|+|++|+++||||+
T Consensus 219 -~~~~~~~~~~~~~~~~~~~~~---~~~~~~~--------~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~~~~~ 286 (298)
T cd07841 219 -LGTPTEENWPGVTSLPDYVEF---KPFPPTP--------LKQIFPAASDDALDLLQRLLTLNPNKRITARQALEHPYFS 286 (298)
T ss_pred -cCCCchhhhhhcccccccccc---cccCCcc--------hhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhCcccc
Confidence 001111111111111111111 0111110 0111223344566899999999999999999999999998
Q ss_pred CCCC
Q 003158 825 SDVS 828 (843)
Q Consensus 825 ~~~~ 828 (843)
+...
T Consensus 287 ~~~~ 290 (298)
T cd07841 287 NDPA 290 (298)
T ss_pred CCCC
Confidence 8554
No 229
>PHA03210 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=7.7e-37 Score=351.38 Aligned_cols=293 Identities=19% Similarity=0.241 Sum_probs=200.8
Q ss_pred HHcCCCCCCcccccCCeeEEEEEeCC--CcEEEEEEe--------------c---cCChhhHHHHHHHHHHHHhccCCcc
Q 003158 509 ATNNFNSSTQIGQGGYGKVYKGILPD--GTVVAVKRA--------------Q---EGSLQGEKEFLTEIQFLSRLHHRNL 569 (843)
Q Consensus 509 ~~~~~~~~~~lg~G~~g~Vy~~~~~~--~~~vavK~~--------------~---~~~~~~~~~~~~E~~~l~~l~h~nI 569 (843)
..++|++.+.||+|+||+||+|..+. +..+++|.+ . .........+.+|++++++++|+||
T Consensus 146 ~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnI 225 (501)
T PHA03210 146 FLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENI 225 (501)
T ss_pred hhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCc
Confidence 45789999999999999999987532 222222211 0 0111224567899999999999999
Q ss_pred cceeeeeecCCcEEEEEecCCCCCHHHHHhhcC---CCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEc
Q 003158 570 VSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKS---KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLD 646 (843)
Q Consensus 570 v~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~---~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~ 646 (843)
+++++++.+.+..++|+|++ .++|.+++.... ........++.++.||+.||+|||+++ ||||||||+|||++
T Consensus 226 v~l~~~~~~~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~g---IiHrDLKP~NILl~ 301 (501)
T PHA03210 226 LKIEEILRSEANTYMITQKY-DFDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKK---LIHRDIKLENIFLN 301 (501)
T ss_pred CcEeEEEEECCeeEEEEecc-ccCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEC
Confidence 99999999999999999999 468887775432 112335567789999999999999999 99999999999999
Q ss_pred CCCcEEEeeccccccCCCCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCC-CCCCc-c
Q 003158 647 HKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQP-ISHGK-N 724 (843)
Q Consensus 647 ~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~p-f~~~~-~ 724 (843)
.++.+||+|||+++...... ........||..|+|||++.+..++.++|||||||++|||++|..+ +.... .
T Consensus 302 ~~~~vkL~DFGla~~~~~~~------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~ 375 (501)
T PHA03210 302 CDGKIVLGDFGTAMPFEKER------EAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGGGK 375 (501)
T ss_pred CCCCEEEEeCCCceecCccc------ccccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCC
Confidence 99999999999998664321 1112235689999999999999999999999999999999998754 43222 2
Q ss_pred hHHHHHHHhhcccchhhccCCCCCCCHHHHHHHHHHHHHhcccCCCCCC-CHHHHHHHHHHhhhhCCCCCCCCCccccCC
Q 003158 725 IVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARP-SMSEVMRELESIWNMMPESDTKTPEFINSE 803 (843)
Q Consensus 725 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RP-s~~~vl~~L~~~~~~~~~~~~~~~dll~~~ 803 (843)
...+........ ..... .+|+. ...+.+.+.. ......+ ....+++.+ .....+.+++.+|
T Consensus 376 ~~~~~~~~~~~~---~~~~~---~~p~~-~~~~~~~i~~---~~~~~~~~~~~~~~~~~--------~~~~~~~~li~km 437 (501)
T PHA03210 376 PGKQLLKIIDSL---SVCDE---EFPDP-PCKLFDYIDS---AEIDHAGHSVPPLIRNL--------GLPADFEYPLVKM 437 (501)
T ss_pred HHHHHHHHHHhc---ccChh---hcCCc-HHHHHHHhhh---hhcccCccchhhHHHhc--------CCChHHHHHHHHH
Confidence 222222211100 00111 11111 1112222111 1111111 222222211 1233456789999
Q ss_pred CCCCCCCCCCCccCCCCCcccCCCCC
Q 003158 804 HTSKEETPPSSSSMLKHPYVSSDVSG 829 (843)
Q Consensus 804 L~~dp~~R~sa~e~L~Hp~f~~~~~~ 829 (843)
|++||++||||+|+|.||||+.....
T Consensus 438 L~~DP~~Rpsa~elL~hp~f~~~~~~ 463 (501)
T PHA03210 438 LTFDWHLRPGAAELLALPLFSAEEEE 463 (501)
T ss_pred hccCcccCcCHHHHhhChhhhcCCch
Confidence 99999999999999999999876543
No 230
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=100.00 E-value=1.3e-36 Score=325.76 Aligned_cols=279 Identities=24% Similarity=0.366 Sum_probs=207.2
Q ss_pred cCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCCh--hhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEEe
Q 003158 511 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 587 (843)
Q Consensus 511 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e 587 (843)
++|+..+.||+|+||.||+|... +++.||+|++..... ...+.+.+|+++++.++|+||+++++++......++|||
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e 80 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFE 80 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEe
Confidence 46888999999999999999975 689999998864322 234568899999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCC
Q 003158 588 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 667 (843)
Q Consensus 588 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~ 667 (843)
|+++++|..++... ..+++..++.++.|++.||+|||+.+ ++||||||+||+++.++.++|+|||++........
T Consensus 81 ~~~~~~l~~~~~~~--~~~~~~~~~~~~~ql~~~l~~LH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~ 155 (286)
T cd07847 81 YCDHTVLNELEKNP--RGVPEHLIKKIIWQTLQAVNFCHKHN---CIHRDVKPENILITKQGQIKLCDFGFARILTGPGD 155 (286)
T ss_pred ccCccHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCChhhEEEcCCCcEEECccccceecCCCcc
Confidence 99998888877543 35889999999999999999999998 99999999999999999999999999986643221
Q ss_pred CCcccceeeeeecccCCccCchhccc-CCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhccCCC
Q 003158 668 EGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNM 746 (843)
Q Consensus 668 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 746 (843)
......++..|+|||.+.+ ..++.++|||||||++|||++|+.||................. ..+.
T Consensus 156 -------~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~---~~~~--- 222 (286)
T cd07847 156 -------DYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLG---DLIP--- 222 (286)
T ss_pred -------cccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhC---CCCh---
Confidence 1123457789999999876 5578899999999999999999999976543221111000000 0000
Q ss_pred CCCCHHHHHHHHH---HHHHhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCCCCccCCCCCcc
Q 003158 747 GSYPSECVEKFIK---LALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYV 823 (843)
Q Consensus 747 ~~~~~~~~~~l~~---l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~sa~e~L~Hp~f 823 (843)
. ...... .........+..++.... .++..+....+|+.+|+..||++|||+.|++.||||
T Consensus 223 -----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~~~f 286 (286)
T cd07847 223 -----R-HQQIFSTNQFFKGLSIPEPETREPLES----------KFPNISSPALSFLKGCLQMDPTERLSCEELLEHPYF 286 (286)
T ss_pred -----H-HhhhcccccccccccCCCcccccCHHH----------HhccCCHHHHHHHHHHhcCCccccCCHHHHhcCCCC
Confidence 0 000000 000000111222222211 122334556789999999999999999999999998
No 231
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=2.3e-37 Score=334.72 Aligned_cols=250 Identities=26% Similarity=0.458 Sum_probs=195.5
Q ss_pred CCcccccCCeeEEEEEeC-CCcEEEEEEec---c-CChhhHHHHHHHHHHHHhccCCcccceeeeeecCC--cEEEEEec
Q 003158 516 STQIGQGGYGKVYKGILP-DGTVVAVKRAQ---E-GSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEG--EQMLVYEF 588 (843)
Q Consensus 516 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~---~-~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~--~~~lV~e~ 588 (843)
..+||+|+|-+||||.+. +|..||---++ . ......++|..|+.+|+.|+|+||+++++++.+.. ...+|+|.
T Consensus 45 ~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iTEL 124 (632)
T KOG0584|consen 45 DEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFITEL 124 (632)
T ss_pred hhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeeeec
Confidence 457999999999999975 57777632222 1 13334578999999999999999999999997655 47899999
Q ss_pred CCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcC-CCcEEEeeccccccCCCCCC
Q 003158 589 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDH-KFTAKVADFGLSRLAPVPDI 667 (843)
Q Consensus 589 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~-~~~~kl~DfGla~~~~~~~~ 667 (843)
|..|+|+.|.++.+. ++...++.|++||++||.|||++ +|||||||||-+||+|+. -|.|||+|+|+|......
T Consensus 125 ~TSGtLr~Y~kk~~~--vn~kaik~W~RQILkGL~yLHs~-~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~s-- 199 (632)
T KOG0584|consen 125 FTSGTLREYRKKHRR--VNIKAIKSWCRQILKGLVYLHSQ-DPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRKS-- 199 (632)
T ss_pred ccCCcHHHHHHHhcc--CCHHHHHHHHHHHHHHhhhhhcC-CCCccccccccceEEEcCCcCceeecchhHHHHhhcc--
Confidence 999999999987654 77788999999999999999997 589999999999999985 589999999999876532
Q ss_pred CCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhccCCCC
Q 003158 668 EGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMG 747 (843)
Q Consensus 668 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 747 (843)
....+.|||.|||||... ..|++.+||||||++++||+|+..||..-.+..+..++ ++.|..+
T Consensus 200 -------~aksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQIYKK---------V~SGiKP 262 (632)
T KOG0584|consen 200 -------HAKSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSECTNPAQIYKK---------VTSGIKP 262 (632)
T ss_pred -------ccceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhhCCHHHHHHH---------HHcCCCH
Confidence 234478999999999987 78999999999999999999999999866554443332 2222211
Q ss_pred CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCCCCccCCCCCcccCC
Q 003158 748 SYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSSD 826 (843)
Q Consensus 748 ~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~sa~e~L~Hp~f~~~ 826 (843)
. .+. ...++++.+||.+||.. .++|+||.|+|.||||..+
T Consensus 263 ---~----sl~-------------------------------kV~dPevr~fIekCl~~-~~~R~sa~eLL~d~Ff~~d 302 (632)
T KOG0584|consen 263 ---A----ALS-------------------------------KVKDPEVREFIEKCLAT-KSERLSAKELLKDPFFDED 302 (632)
T ss_pred ---H----Hhh-------------------------------ccCCHHHHHHHHHHhcC-chhccCHHHHhhChhhccc
Confidence 0 000 11233444566666666 7788899999999999886
No 232
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=100.00 E-value=9.3e-36 Score=316.50 Aligned_cols=257 Identities=27% Similarity=0.434 Sum_probs=208.2
Q ss_pred HcCCCCCCcccccCCeeEEEEEeCC----CcEEEEEEeccCC-hhhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEE
Q 003158 510 TNNFNSSTQIGQGGYGKVYKGILPD----GTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQML 584 (843)
Q Consensus 510 ~~~~~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~l 584 (843)
.++|.+.+.||+|+||.||+|...+ ...||+|...... ....+.+.+|+.+++.++||||+++++++.+ +..++
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~l 83 (270)
T cd05056 5 REDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NPVWI 83 (270)
T ss_pred hhhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcC-CCcEE
Confidence 3567888999999999999998643 3579999887654 3445688999999999999999999999875 56789
Q ss_pred EEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCC
Q 003158 585 VYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPV 664 (843)
Q Consensus 585 V~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~ 664 (843)
||||+++|+|.+++.... ..+++..++.++.|++.||+|||+.+ ++||||||+||+++.++.+||+|||+++....
T Consensus 84 v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~l~~~l~~lH~~~---~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~ 159 (270)
T cd05056 84 VMELAPLGELRSYLQVNK-YSLDLASLILYSYQLSTALAYLESKR---FVHRDIAARNVLVSSPDCVKLGDFGLSRYLED 159 (270)
T ss_pred EEEcCCCCcHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhCC---eeccccChheEEEecCCCeEEccCceeeeccc
Confidence 999999999999996543 35899999999999999999999998 99999999999999999999999999976543
Q ss_pred CCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHh-CCCCCCCCcchHHHHHHHhhcccchhhcc
Q 003158 665 PDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVID 743 (843)
Q Consensus 665 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 743 (843)
... .......++..|+|||.+....++.++|||||||++||+++ |+.||......... . .+..
T Consensus 160 ~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~-~---------~~~~ 223 (270)
T cd05056 160 ESY------YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDVI-G---------RIEN 223 (270)
T ss_pred ccc------eecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHHH-H---------HHHc
Confidence 211 11122234568999999988889999999999999999996 99999765432111 1 1111
Q ss_pred CCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhh
Q 003158 744 GNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWN 787 (843)
Q Consensus 744 ~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~ 787 (843)
+.....+..++..+.+++.+|+..+|.+||++.+++..|+++.+
T Consensus 224 ~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~l~~~~~ 267 (270)
T cd05056 224 GERLPMPPNCPPTLYSLMTKCWAYDPSKRPRFTELKAQLSDILQ 267 (270)
T ss_pred CCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 22223455667889999999999999999999999999998754
No 233
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=100.00 E-value=1.1e-35 Score=317.72 Aligned_cols=258 Identities=27% Similarity=0.439 Sum_probs=205.4
Q ss_pred HcCCCCCCcccccCCeeEEEEEeC-CCc----EEEEEEeccCC-hhhHHHHHHHHHHHHhccCCcccceeeeeecCCcEE
Q 003158 510 TNNFNSSTQIGQGGYGKVYKGILP-DGT----VVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQM 583 (843)
Q Consensus 510 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~----~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~ 583 (843)
.++|+..+.||+|+||+||+|.+. +++ .||+|++.... ....+++.+|+.+++.++|+||+++++++.. ...+
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~~~ 84 (279)
T cd05109 6 ETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLT-STVQ 84 (279)
T ss_pred hhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcC-CCcE
Confidence 457888999999999999999853 444 48999987543 3345678899999999999999999999975 4578
Q ss_pred EEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCC
Q 003158 584 LVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAP 663 (843)
Q Consensus 584 lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~ 663 (843)
++|||+++|+|.++++... ..+++..++.++.|++.||+|||+.+ |+||||||+||++++++.+||+|||+++...
T Consensus 85 l~~~~~~~g~l~~~l~~~~-~~~~~~~~~~~~~qi~~~L~~lH~~~---iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~~ 160 (279)
T cd05109 85 LVTQLMPYGCLLDYVRENK-DRIGSQDLLNWCVQIAKGMSYLEEVR---LVHRDLAARNVLVKSPNHVKITDFGLARLLD 160 (279)
T ss_pred EEEEcCCCCCHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHHHCC---eeccccccceEEEcCCCcEEECCCCceeecc
Confidence 9999999999999997543 35889999999999999999999998 9999999999999999999999999998764
Q ss_pred CCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHh-CCCCCCCCcchHHHHHHHhhcccchhhc
Q 003158 664 VPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVI 742 (843)
Q Consensus 664 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 742 (843)
.... ........++..|+|||...+..++.++|||||||++|||++ |..||....... .... +.
T Consensus 161 ~~~~-----~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~--~~~~--------~~ 225 (279)
T cd05109 161 IDET-----EYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPARE--IPDL--------LE 225 (279)
T ss_pred cccc-----eeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHH--HHHH--------HH
Confidence 3211 011112235678999999999999999999999999999998 888886543211 1111 11
Q ss_pred cCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhh
Q 003158 743 DGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWN 787 (843)
Q Consensus 743 ~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~ 787 (843)
.+.....+..++..+.+++.+||..+|++||++.++++.++.+..
T Consensus 226 ~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~~~ 270 (279)
T cd05109 226 KGERLPQPPICTIDVYMIMVKCWMIDSECRPRFRELVDEFSRMAR 270 (279)
T ss_pred CCCcCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence 111223344567788999999999999999999999998887643
No 234
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=100.00 E-value=1.2e-35 Score=314.13 Aligned_cols=204 Identities=29% Similarity=0.441 Sum_probs=173.7
Q ss_pred cCCCCCCcccccCCeeEEEEEe-CCCcEEEEEEeccCCh-----hhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEE
Q 003158 511 NNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSL-----QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQML 584 (843)
Q Consensus 511 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-----~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~l 584 (843)
++|.+.+.||+|++|.||+|.. .+++.||+|.+..... ...+.+.+|++++++++||||+++++++.+++..++
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~ 81 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSI 81 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEE
Confidence 4688999999999999999996 4689999998864321 123568899999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCC
Q 003158 585 VYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPV 664 (843)
Q Consensus 585 V~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~ 664 (843)
||||+++++|.+++.... .+++..++.++.|++.||.|||+.+ |+||||||+||++++++.++|+|||+++....
T Consensus 82 v~e~~~~~~l~~~~~~~~--~~~~~~~~~~~~~l~~~l~~lH~~~---i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~~ 156 (263)
T cd06625 82 FMEYMPGGSVKDQLKAYG--ALTETVTRKYTRQILEGVEYLHSNM---IVHRDIKGANILRDSAGNVKLGDFGASKRLQT 156 (263)
T ss_pred EEEECCCCcHHHHHHHhC--CCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEeecccceeccc
Confidence 999999999999986543 4788889999999999999999999 99999999999999999999999999876532
Q ss_pred CCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCc
Q 003158 665 PDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 723 (843)
Q Consensus 665 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~ 723 (843)
.... ........++..|+|||.+.+..++.++||||+||++|||++|+.||....
T Consensus 157 ~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~ 211 (263)
T cd06625 157 ICSS----GTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFE 211 (263)
T ss_pred cccc----cccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccc
Confidence 1100 011123457789999999999889999999999999999999999997543
No 235
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=100.00 E-value=2.1e-36 Score=325.56 Aligned_cols=281 Identities=25% Similarity=0.355 Sum_probs=207.1
Q ss_pred cCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCChh--hHHHHHHHHHHHHhccCCcccceeeeeecC--CcEEEE
Q 003158 511 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ--GEKEFLTEIQFLSRLHHRNLVSLVGYCDEE--GEQMLV 585 (843)
Q Consensus 511 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~--~~~~lV 585 (843)
++|+..+.||+|+||.||+|..+ +++.||+|.++..... ....+.+|++++++++||||+++++++... +..++|
T Consensus 5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~lv 84 (293)
T cd07843 5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYMV 84 (293)
T ss_pred hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEEE
Confidence 46888999999999999999975 6899999998754322 234577899999999999999999998776 899999
Q ss_pred EecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCC
Q 003158 586 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVP 665 (843)
Q Consensus 586 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~ 665 (843)
|||++ ++|.+++.... ..+++..++.++.|+++||+|||+.+ ++||||||+||++++++.+||+|||++......
T Consensus 85 ~e~~~-~~L~~~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~---i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~ 159 (293)
T cd07843 85 MEYVE-HDLKSLMETMK-QPFLQSEVKCLMLQLLSGVAHLHDNW---ILHRDLKTSNLLLNNRGILKICDFGLAREYGSP 159 (293)
T ss_pred ehhcC-cCHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCCHHHEEECCCCcEEEeecCceeeccCC
Confidence 99996 59999986643 36899999999999999999999999 999999999999999999999999999865432
Q ss_pred CCCCcccceeeeeecccCCccCchhcccC-CCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhccC
Q 003158 666 DIEGIVPAHVSTVVKGTPGYLDPEYFLTH-KLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDG 744 (843)
Q Consensus 666 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 744 (843)
. .......+++.|+|||.+.+. .++.++|+||+||++|||++|+.||....... ...... .
T Consensus 160 ~-------~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~-~~~~~~----------~ 221 (293)
T cd07843 160 L-------KPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEID-QLNKIF----------K 221 (293)
T ss_pred c-------cccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHH----------H
Confidence 1 111234577899999998764 46889999999999999999999997554321 111110 0
Q ss_pred CCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCCC--CCCCCccccCCCCCCCCCCCCCccCCCCCc
Q 003158 745 NMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPES--DTKTPEFINSEHTSKEETPPSSSSMLKHPY 822 (843)
Q Consensus 745 ~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~--~~~~~dll~~~L~~dp~~R~sa~e~L~Hp~ 822 (843)
..+...+..++.+.++...- .....++....+ ...++.. .+...+++++||+.||++|||++|+|.|||
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~-------~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~~~~ 292 (293)
T cd07843 222 LLGTPTEKIWPGFSELPGAK--KKTFTKYPYNQL-------RKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALKHPY 292 (293)
T ss_pred HhCCCchHHHHHhhccchhc--ccccccccchhh-------hccccccCCChHHHHHHHHHhccCccccCCHHHHhcCCC
Confidence 11111122222221111000 000111111111 1222322 555678999999999999999999999999
Q ss_pred c
Q 003158 823 V 823 (843)
Q Consensus 823 f 823 (843)
|
T Consensus 293 f 293 (293)
T cd07843 293 F 293 (293)
T ss_pred C
Confidence 8
No 236
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=100.00 E-value=8.9e-36 Score=321.02 Aligned_cols=261 Identities=26% Similarity=0.405 Sum_probs=202.8
Q ss_pred HcCCCCCCcccccCCeeEEEEEeCC---------------CcEEEEEEeccCC-hhhHHHHHHHHHHHHhccCCccccee
Q 003158 510 TNNFNSSTQIGQGGYGKVYKGILPD---------------GTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLV 573 (843)
Q Consensus 510 ~~~~~~~~~lg~G~~g~Vy~~~~~~---------------~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~ 573 (843)
.++|++.+.||+|+||.||+|...+ ...||+|.+.... ......+.+|++++++++|+||++++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~ 83 (295)
T cd05097 4 RQQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLL 83 (295)
T ss_pred hHhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEE
Confidence 4578999999999999999987532 2358999987543 23346789999999999999999999
Q ss_pred eeeecCCcEEEEEecCCCCCHHHHHhhcC----------CCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcE
Q 003158 574 GYCDEEGEQMLVYEFMSNGTLRDQLSAKS----------KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNI 643 (843)
Q Consensus 574 ~~~~~~~~~~lV~e~~~~gsL~~~l~~~~----------~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NI 643 (843)
+++...+..++||||+++++|.+++.... ...+++..++.++.|++.||+|||+.+ ++||||||+||
T Consensus 84 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~---i~H~dlkp~Ni 160 (295)
T cd05097 84 GVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLN---FVHRDLATRNC 160 (295)
T ss_pred EEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcC---eeccccChhhE
Confidence 99999999999999999999999986532 123678889999999999999999999 99999999999
Q ss_pred EEcCCCcEEEeeccccccCCCCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHh--CCCCCCC
Q 003158 644 LLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT--GMQPISH 721 (843)
Q Consensus 644 Ll~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~ellt--g~~pf~~ 721 (843)
++++++.+||+|||++........ ........++..|+|||++.+..++.++|||||||++|||++ |..||..
T Consensus 161 ll~~~~~~kl~dfg~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~ 235 (295)
T cd05097 161 LVGNHYTIKIADFGMSRNLYSGDY-----YRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSL 235 (295)
T ss_pred EEcCCCcEEecccccccccccCcc-----eeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcc
Confidence 999999999999999976532211 111122345678999999999899999999999999999998 6667764
Q ss_pred CcchH--HHHHHHhhcccchhhccCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 003158 722 GKNIV--REVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELE 783 (843)
Q Consensus 722 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~ 783 (843)
..... ......+.. .........+..++..+.+++.+||+.+|++||++.++++.|+
T Consensus 236 ~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~ 294 (295)
T cd05097 236 LSDEQVIENTGEFFRN-----QGRQIYLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHHFLR 294 (295)
T ss_pred cChHHHHHHHHHhhhh-----ccccccCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHh
Confidence 33211 111110000 0001111223345678999999999999999999999998875
No 237
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=100.00 E-value=3.2e-36 Score=323.81 Aligned_cols=258 Identities=23% Similarity=0.365 Sum_probs=201.9
Q ss_pred CCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCChhhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEEecCCC
Q 003158 513 FNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSN 591 (843)
Q Consensus 513 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e~~~~ 591 (843)
|.....||+|+||.||++... ++..||||.+........+.+.+|+.+++.++|+||+++++.+...+..++||||+++
T Consensus 24 ~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~ 103 (292)
T cd06658 24 LDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFLEG 103 (292)
T ss_pred HhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeCCCC
Confidence 444567999999999999964 6899999998765555567789999999999999999999999999999999999999
Q ss_pred CCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCCCCcc
Q 003158 592 GTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIV 671 (843)
Q Consensus 592 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~ 671 (843)
++|.+++... .+++..++.++.||+.||+|||+++ |+||||||+||++++++.++|+|||++.......
T Consensus 104 ~~L~~~~~~~---~l~~~~~~~~~~qi~~~l~~LH~~~---ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~----- 172 (292)
T cd06658 104 GALTDIVTHT---RMNEEQIATVCLSVLRALSYLHNQG---VIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEV----- 172 (292)
T ss_pred CcHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCC---EeecCCCHHHEEEcCCCCEEEccCcchhhccccc-----
Confidence 9999988542 4788999999999999999999998 9999999999999999999999999987543211
Q ss_pred cceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhccCCCCCCCH
Q 003158 672 PAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPS 751 (843)
Q Consensus 672 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 751 (843)
.......|+..|+|||.+.+..++.++||||||+++|||++|+.||........ .
T Consensus 173 --~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~-~---------------------- 227 (292)
T cd06658 173 --PKRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQA-M---------------------- 227 (292)
T ss_pred --ccCceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH-H----------------------
Confidence 111234588999999999988899999999999999999999999965432110 0
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCCCCccCCCCCcccCCCCCC
Q 003158 752 ECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSSDVSGS 830 (843)
Q Consensus 752 ~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~sa~e~L~Hp~f~~~~~~~ 830 (843)
..+............ .......+++.+|+..||++|||++|+++||||......+
T Consensus 228 -------~~~~~~~~~~~~~~~-----------------~~~~~~~~li~~~l~~~P~~Rpt~~~il~~~~~~~~~~~~ 282 (292)
T cd06658 228 -------RRIRDNLPPRVKDSH-----------------KVSSVLRGFLDLMLVREPSQRATAQELLQHPFLKLAGPPS 282 (292)
T ss_pred -------HHHHhcCCCcccccc-----------------ccCHHHHHHHHHHccCChhHCcCHHHHhhChhhhccCCcc
Confidence 001111110000000 0111223567778888999999999999999998765544
No 238
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=9e-37 Score=328.70 Aligned_cols=244 Identities=25% Similarity=0.368 Sum_probs=205.7
Q ss_pred cccccCCeeEEEEEeC-CCcEEEEEEeccCChhhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEEecCCCCCHHH
Q 003158 518 QIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRD 596 (843)
Q Consensus 518 ~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e~~~~gsL~~ 596 (843)
+||+|.||+||.|++. +...+|||-+.....+..+-+..|+.+-++++|.|||+++|.|.++++.-+.||.++||+|.+
T Consensus 582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGSLSs 661 (1226)
T KOG4279|consen 582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGSLSS 661 (1226)
T ss_pred EeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCcHHH
Confidence 6899999999999965 567899999886665556678899999999999999999999999999999999999999999
Q ss_pred HHhhcCCCCc--chhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEc-CCCcEEEeeccccccCCCCCCCCcccc
Q 003158 597 QLSAKSKEPL--GFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLD-HKFTAKVADFGLSRLAPVPDIEGIVPA 673 (843)
Q Consensus 597 ~l~~~~~~~l--~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~-~~~~~kl~DfGla~~~~~~~~~~~~~~ 673 (843)
+++.+ -.|+ .+.+.-.+.+||++||.|||+.. |||||||-+|||++ -.|.+||+|||.++.+..- .
T Consensus 662 LLrsk-WGPlKDNEstm~fYtkQILeGLkYLHen~---IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAgi-------n 730 (1226)
T KOG4279|consen 662 LLRSK-WGPLKDNESTMNFYTKQILEGLKYLHENK---IVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGI-------N 730 (1226)
T ss_pred HHHhc-cCCCccchhHHHHHHHHHHHHhhhhhhcc---eeeccccCCcEEEeeccceEEecccccchhhccC-------C
Confidence 99763 2345 77888889999999999999999 99999999999996 5789999999999876532 1
Q ss_pred eeeeeecccCCccCchhcccC--CCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhccCCCCCCCH
Q 003158 674 HVSTVVKGTPGYLDPEYFLTH--KLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPS 751 (843)
Q Consensus 674 ~~~~~~~gt~~y~aPE~~~~~--~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 751 (843)
..+....||..|||||++..+ .|+.++|||||||++.||.||++||..-.+...... .--+-...++.|+
T Consensus 731 P~TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAAMF--------kVGmyKvHP~iPe 802 (1226)
T KOG4279|consen 731 PCTETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAAMF--------KVGMYKVHPPIPE 802 (1226)
T ss_pred ccccccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhHhhh--------hhcceecCCCCcH
Confidence 234556799999999999864 588999999999999999999999975444322111 1112234567899
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 003158 752 ECVEKFIKLALKCCQDETDARPSMSEVMR 780 (843)
Q Consensus 752 ~~~~~l~~l~~~c~~~~p~~RPs~~~vl~ 780 (843)
+.+.+...++.+|+.++|..||++.++++
T Consensus 803 elsaeak~FilrcFepd~~~R~sA~~LL~ 831 (1226)
T KOG4279|consen 803 ELSAEAKNFILRCFEPDPCDRPSAKDLLQ 831 (1226)
T ss_pred HHHHHHHHHHHHHcCCCcccCccHHHhcc
Confidence 99999999999999999999999999874
No 239
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=100.00 E-value=1.2e-35 Score=320.11 Aligned_cols=263 Identities=28% Similarity=0.430 Sum_probs=206.1
Q ss_pred HcCCCCCCcccccCCeeEEEEEeCC-----------------CcEEEEEEeccCC-hhhHHHHHHHHHHHHhccCCcccc
Q 003158 510 TNNFNSSTQIGQGGYGKVYKGILPD-----------------GTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVS 571 (843)
Q Consensus 510 ~~~~~~~~~lg~G~~g~Vy~~~~~~-----------------~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~ 571 (843)
.++|++.+.||+|+||.||+|...+ +..||+|.+.... ....+++.+|++++++++||||++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~ 83 (296)
T cd05051 4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIAR 83 (296)
T ss_pred hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeE
Confidence 4578899999999999999998542 2468999987543 334568899999999999999999
Q ss_pred eeeeeecCCcEEEEEecCCCCCHHHHHhhcC---------CCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCc
Q 003158 572 LVGYCDEEGEQMLVYEFMSNGTLRDQLSAKS---------KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASN 642 (843)
Q Consensus 572 l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~---------~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~N 642 (843)
+++++..++..++||||+++++|.+++.... ...+++..++.++.|++.||+|||+.+ |+||||||+|
T Consensus 84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~---i~H~dlkp~N 160 (296)
T cd05051 84 LLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLN---FVHRDLATRN 160 (296)
T ss_pred EEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcC---ccccccchhc
Confidence 9999999999999999999999999997643 125889999999999999999999998 9999999999
Q ss_pred EEEcCCCcEEEeeccccccCCCCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHh--CCCCCC
Q 003158 643 ILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT--GMQPIS 720 (843)
Q Consensus 643 ILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~ellt--g~~pf~ 720 (843)
|++++++.++|+|||+++.....+. ........++..|+|||.+.+..++.++|||||||++|||++ |..||.
T Consensus 161 ili~~~~~~~l~dfg~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~ 235 (296)
T cd05051 161 CLVGKNYTIKIADFGMSRNLYSSDY-----YRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYE 235 (296)
T ss_pred eeecCCCceEEccccceeecccCcc-----eeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCC
Confidence 9999999999999999876543221 111223446778999999998889999999999999999998 677876
Q ss_pred CCcchHHHHHHHhhcccchhhccCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 003158 721 HGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELE 783 (843)
Q Consensus 721 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~ 783 (843)
....... ...... .....-.......+..++.++.+++.+|++.+|.+||++.++++.|+
T Consensus 236 ~~~~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~ 295 (296)
T cd05051 236 HLTDQQV-IENAGH--FFRDDGRQIYLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHLFLQ 295 (296)
T ss_pred CcChHHH-HHHHHh--ccccccccccCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHHHhc
Confidence 5432111 111100 00000000111223445678999999999999999999999998875
No 240
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=1.2e-35 Score=320.13 Aligned_cols=200 Identities=25% Similarity=0.426 Sum_probs=175.6
Q ss_pred cCCCCCCcccccCCeeEEEEEe-CCCcEEEEEEeccCChhhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEEecC
Q 003158 511 NNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFM 589 (843)
Q Consensus 511 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e~~ 589 (843)
.+|+..+.||+|+||.||+|.. .+++.||+|.+........+.+.+|+.+++.++|+||+++++++......++||||+
T Consensus 20 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~e~~ 99 (296)
T cd06654 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYL 99 (296)
T ss_pred cceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEeeccc
Confidence 4788889999999999999995 468999999988655555677899999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCCCC
Q 003158 590 SNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEG 669 (843)
Q Consensus 590 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~ 669 (843)
++++|.+++... .+++.++..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++.......
T Consensus 100 ~~~~L~~~~~~~---~~~~~~~~~i~~ql~~aL~~LH~~g---i~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~--- 170 (296)
T cd06654 100 AGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ--- 170 (296)
T ss_pred CCCCHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEcCCCCEEECccccchhccccc---
Confidence 999999998543 4788899999999999999999999 9999999999999999999999999987643221
Q ss_pred cccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCc
Q 003158 670 IVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 723 (843)
Q Consensus 670 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~ 723 (843)
.......+++.|+|||.+.+..++.++|||||||++|||++|+.||....
T Consensus 171 ----~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~ 220 (296)
T cd06654 171 ----SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNEN 220 (296)
T ss_pred ----cccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCC
Confidence 11123458889999999998889999999999999999999999997544
No 241
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=100.00 E-value=9.6e-36 Score=316.24 Aligned_cols=259 Identities=28% Similarity=0.470 Sum_probs=205.7
Q ss_pred cCCCCCCcccccCCeeEEEEEeC-CC---cEEEEEEeccCC-hhhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEE
Q 003158 511 NNFNSSTQIGQGGYGKVYKGILP-DG---TVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLV 585 (843)
Q Consensus 511 ~~~~~~~~lg~G~~g~Vy~~~~~-~~---~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV 585 (843)
..|++.+.||+|+||.||+|... ++ ..||||.+.... ....+++..|+.+++.++||||+++++++.+++..++|
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv 83 (269)
T cd05065 4 SCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMII 83 (269)
T ss_pred HHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEEE
Confidence 34778899999999999999964 33 369999987542 33456899999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCC
Q 003158 586 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVP 665 (843)
Q Consensus 586 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~ 665 (843)
|||+++|+|.+++.... ..+++..++.++.|++.||+|||+.+ ++||||||+||+++.++.+||+|||++......
T Consensus 84 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~~l~~al~~lH~~g---~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~ 159 (269)
T cd05065 84 TEFMENGALDSFLRQND-GQFTVIQLVGMLRGIAAGMKYLSEMN---YVHRDLAARNILVNSNLVCKVSDFGLSRFLEDD 159 (269)
T ss_pred EecCCCCcHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccChheEEEcCCCcEEECCCccccccccC
Confidence 99999999999997543 35889999999999999999999998 999999999999999999999999998765432
Q ss_pred CCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHh-CCCCCCCCcchHHHHHHHhhcccchhhccC
Q 003158 666 DIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDG 744 (843)
Q Consensus 666 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 744 (843)
..... .........+..|+|||.+.+..++.++|||||||++||+++ |..||...... +.... +...
T Consensus 160 ~~~~~--~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~-~~~~~---------i~~~ 227 (269)
T cd05065 160 TSDPT--YTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQ-DVINA---------IEQD 227 (269)
T ss_pred ccccc--cccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHH-HHHHH---------HHcC
Confidence 21100 000011112457999999999999999999999999999987 99999754421 11111 1111
Q ss_pred CCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHh
Q 003158 745 NMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 785 (843)
Q Consensus 745 ~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~ 785 (843)
...+.+.+++..+.+++.+||+.+|.+||++.+++..|+++
T Consensus 228 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 268 (269)
T cd05065 228 YRLPPPMDCPTALHQLMLDCWQKDRNARPKFGQIVSTLDKM 268 (269)
T ss_pred CcCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 11233456677889999999999999999999999988764
No 242
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=100.00 E-value=1.1e-35 Score=316.35 Aligned_cols=203 Identities=31% Similarity=0.465 Sum_probs=172.8
Q ss_pred HHcCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCChhhHHHHHHHHHHHHhc-cCCcccceeeeeecC------C
Q 003158 509 ATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEE------G 580 (843)
Q Consensus 509 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~------~ 580 (843)
+++.|+..+.||+|+||.||+|... +++.||+|++.... .....+.+|+.+++++ +|+||+++++++... .
T Consensus 4 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~ 82 (272)
T cd06637 4 PAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDD 82 (272)
T ss_pred hhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCC-ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCCc
Confidence 5677888999999999999999964 68899999987533 3446788999999998 799999999998643 4
Q ss_pred cEEEEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccc
Q 003158 581 EQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSR 660 (843)
Q Consensus 581 ~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~ 660 (843)
..++||||+++++|.+++.......+++..+..++.|++.||+|||+++ |+||||||+||++++++.+||+|||++.
T Consensus 83 ~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~---ivh~dl~~~nili~~~~~~~l~Dfg~~~ 159 (272)
T cd06637 83 QLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHK---VIHRDIKGQNVLLTENAEVKLVDFGVSA 159 (272)
T ss_pred EEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCCHHHEEECCCCCEEEccCCCce
Confidence 5899999999999999998755567899999999999999999999998 9999999999999999999999999987
Q ss_pred cCCCCCCCCcccceeeeeecccCCccCchhcc-----cCCCCchhhhHHHHHHHHHHHhCCCCCCCC
Q 003158 661 LAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFL-----THKLTDKSDVYSLGVVFLELLTGMQPISHG 722 (843)
Q Consensus 661 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDvwS~G~~l~elltg~~pf~~~ 722 (843)
...... .......|+..|+|||++. ...++.++|||||||++|||++|+.||...
T Consensus 160 ~~~~~~-------~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~ 219 (272)
T cd06637 160 QLDRTV-------GRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDM 219 (272)
T ss_pred eccccc-------ccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCcccc
Confidence 653211 1123456889999999986 345788999999999999999999999643
No 243
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=100.00 E-value=2.4e-35 Score=311.76 Aligned_cols=254 Identities=31% Similarity=0.501 Sum_probs=197.2
Q ss_pred CcccccCCeeEEEEEeC----CCcEEEEEEeccC-ChhhHHHHHHHHHHHHhccCCcccceeeeee-cCCcEEEEEecCC
Q 003158 517 TQIGQGGYGKVYKGILP----DGTVVAVKRAQEG-SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCD-EEGEQMLVYEFMS 590 (843)
Q Consensus 517 ~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~-~~~~~~lV~e~~~ 590 (843)
+.||+|+||.||+|... ++..||+|.+... .....+.+.+|+.+++.++||||+++++++. .++..++||||+.
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~ 80 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMK 80 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCC
Confidence 46899999999999853 2467999988643 2334567889999999999999999999775 4567899999999
Q ss_pred CCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCCCCc
Q 003158 591 NGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGI 670 (843)
Q Consensus 591 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~ 670 (843)
+|+|.+++.... ....+..+..++.|+++||+|||+.+ ++||||||+||++++++.+||+|||+++.........
T Consensus 81 ~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~~- 155 (262)
T cd05058 81 HGDLRNFIRSET-HNPTVKDLIGFGLQVAKGMEYLASKK---FVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYS- 155 (262)
T ss_pred CCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCC---ccccccCcceEEEcCCCcEEECCccccccccCCccee-
Confidence 999999997543 23567778889999999999999998 9999999999999999999999999997543211100
Q ss_pred ccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhC-CCCCCCCcchHHHHHHHhhcccchhhccCCCCCC
Q 003158 671 VPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTG-MQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSY 749 (843)
Q Consensus 671 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 749 (843)
........++..|+|||.+.+..++.++|||||||++|||++| ..||.... ....... +..+.....
T Consensus 156 --~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~-~~~~~~~---------~~~~~~~~~ 223 (262)
T cd05058 156 --VHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVD-SFDITVY---------LLQGRRLLQ 223 (262)
T ss_pred --ecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCC-HHHHHHH---------HhcCCCCCC
Confidence 0111233456789999999988999999999999999999995 44554332 2222111 122222233
Q ss_pred CHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhh
Q 003158 750 PSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWN 787 (843)
Q Consensus 750 ~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~ 787 (843)
+..++..+.+++..||+.+|++||++.+++..++++..
T Consensus 224 ~~~~~~~~~~li~~cl~~~p~~Rp~~~~il~~l~~~~~ 261 (262)
T cd05058 224 PEYCPDPLYEVMLSCWHPKPEMRPTFSELVSRIEQIFS 261 (262)
T ss_pred CCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHhc
Confidence 44556789999999999999999999999999998753
No 244
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=100.00 E-value=1.5e-35 Score=312.53 Aligned_cols=249 Identities=29% Similarity=0.482 Sum_probs=200.5
Q ss_pred CcccccCCeeEEEEEeC--C--CcEEEEEEeccCCh-hhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEEecCCC
Q 003158 517 TQIGQGGYGKVYKGILP--D--GTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSN 591 (843)
Q Consensus 517 ~~lg~G~~g~Vy~~~~~--~--~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e~~~~ 591 (843)
++||+|+||.||+|.+. + +..||+|.+..... ...+++.+|+++++.+.|+||+++++++. ....++||||+++
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~~~ 79 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCK-GEPLMLVMELAPL 79 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEc-CCceEEEEEeCCC
Confidence 46999999999999853 2 36899999886544 34567899999999999999999999876 4568999999999
Q ss_pred CCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCCCCcc
Q 003158 592 GTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIV 671 (843)
Q Consensus 592 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~ 671 (843)
|+|.+++.... .+++..++.++.|++.||+|||+.+ ++||||||+||+++.++.+||+|||+++........
T Consensus 80 ~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lh~~~---i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~--- 151 (257)
T cd05060 80 GPLLKYLKKRR--EIPVSDLKELAHQVAMGMAYLESKH---FVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDY--- 151 (257)
T ss_pred CcHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHhhcC---eeccCcccceEEEcCCCcEEeccccccceeecCCcc---
Confidence 99999997654 5889999999999999999999998 999999999999999999999999999865432110
Q ss_pred cceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHh-CCCCCCCCcchHHHHHHHhhcccchhhccCCCCCCC
Q 003158 672 PAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYP 750 (843)
Q Consensus 672 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 750 (843)
........++..|+|||.+.+..++.++|||||||++|||++ |..||...... +.... . ........+
T Consensus 152 -~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~-~~~~~-~--------~~~~~~~~~ 220 (257)
T cd05060 152 -YRATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGA-EVIAM-L--------ESGERLPRP 220 (257)
T ss_pred -cccccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCHH-HHHHH-H--------HcCCcCCCC
Confidence 011112224568999999998899999999999999999998 99999754431 11111 1 111122345
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHh
Q 003158 751 SECVEKFIKLALKCCQDETDARPSMSEVMRELESI 785 (843)
Q Consensus 751 ~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~ 785 (843)
..++..+.+++.+||+.+|++||++.++.+.|+++
T Consensus 221 ~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~~ 255 (257)
T cd05060 221 EECPQEIYSIMLSCWKYRPEDRPTFSELESTFRRD 255 (257)
T ss_pred CCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhc
Confidence 56678899999999999999999999999999875
No 245
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=100.00 E-value=1.6e-35 Score=314.82 Aligned_cols=249 Identities=30% Similarity=0.489 Sum_probs=198.2
Q ss_pred CcccccCCeeEEEEEeC-CCc--EEEEEEeccCC-hhhHHHHHHHHHHHHhc-cCCcccceeeeeecCCcEEEEEecCCC
Q 003158 517 TQIGQGGYGKVYKGILP-DGT--VVAVKRAQEGS-LQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQMLVYEFMSN 591 (843)
Q Consensus 517 ~~lg~G~~g~Vy~~~~~-~~~--~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~lV~e~~~~ 591 (843)
+.||+|+||.||+|... ++. .+|+|.++... ....+.+.+|+++++++ +||||+++++++...+..++||||+++
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPH 80 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCC
Confidence 36899999999999975 343 57888887432 33456788999999999 799999999999999999999999999
Q ss_pred CCHHHHHhhcC--------------CCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeecc
Q 003158 592 GTLRDQLSAKS--------------KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFG 657 (843)
Q Consensus 592 gsL~~~l~~~~--------------~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfG 657 (843)
|+|.+++.... ...+++..++.++.|++.||+|||+.+ ++||||||+||++++++.+||+|||
T Consensus 81 ~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~---i~H~dikp~nili~~~~~~kl~dfg 157 (270)
T cd05047 81 GNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ---FIHRDLAARNILVGENYVAKIADFG 157 (270)
T ss_pred CcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccccceEEEcCCCeEEECCCC
Confidence 99999997532 124788999999999999999999998 9999999999999999999999999
Q ss_pred ccccCCCCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHh-CCCCCCCCcchHHHHHHHhhcc
Q 003158 658 LSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSS 736 (843)
Q Consensus 658 la~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~ellt-g~~pf~~~~~~~~~~~~~~~~~ 736 (843)
++...... ........+..|+|||++....++.++|||||||++|||++ |..||..... .+....
T Consensus 158 l~~~~~~~--------~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~-~~~~~~----- 223 (270)
T cd05047 158 LSRGQEVY--------VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTC-AELYEK----- 223 (270)
T ss_pred Cccccchh--------hhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCH-HHHHHH-----
Confidence 98632210 00111224567999999988889999999999999999997 9999965432 111111
Q ss_pred cchhhccCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhh
Q 003158 737 MMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIW 786 (843)
Q Consensus 737 ~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~ 786 (843)
+..+.....+..++.++.+++.+||..+|.+||++.+++..|+++.
T Consensus 224 ----~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~~~ 269 (270)
T cd05047 224 ----LPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML 269 (270)
T ss_pred ----HhCCCCCCCCCcCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHhh
Confidence 1111122234445678899999999999999999999999998764
No 246
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=100.00 E-value=2.2e-35 Score=311.11 Aligned_cols=250 Identities=27% Similarity=0.424 Sum_probs=203.6
Q ss_pred CcccccCCeeEEEEEeCC--C--cEEEEEEeccCCh-hhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEEecCCC
Q 003158 517 TQIGQGGYGKVYKGILPD--G--TVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSN 591 (843)
Q Consensus 517 ~~lg~G~~g~Vy~~~~~~--~--~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e~~~~ 591 (843)
+.||+|++|.||+|.+.+ + ..||+|.+..... ...+++.+|++++++++|+||+++++++.+ ...++||||+++
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~~ 79 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELAPL 79 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEecCC
Confidence 468999999999999643 3 3699999987665 556789999999999999999999999988 889999999999
Q ss_pred CCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCCCCcc
Q 003158 592 GTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIV 671 (843)
Q Consensus 592 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~ 671 (843)
|+|.+++.......+++..++.++.|+++||+|||+.+ ++||||||+||+++.++.+||+|||+++........
T Consensus 80 ~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~---i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~--- 153 (257)
T cd05040 80 GSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKR---FIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDH--- 153 (257)
T ss_pred CcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhCC---ccccccCcccEEEecCCEEEeccccccccccccccc---
Confidence 99999997754356899999999999999999999998 999999999999999999999999999876432210
Q ss_pred cceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHh-CCCCCCCCcchHHHHHHHhhcccchhhccCCCCCCC
Q 003158 672 PAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYP 750 (843)
Q Consensus 672 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 750 (843)
........++..|+|||.+.+..++.++|||||||++|||++ |+.||...... +....... .......+
T Consensus 154 -~~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~-~~~~~~~~--------~~~~~~~~ 223 (257)
T cd05040 154 -YVMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGS-QILKKIDK--------EGERLERP 223 (257)
T ss_pred -eecccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHH-HHHHHHHh--------cCCcCCCC
Confidence 111123456788999999999899999999999999999999 99999654322 11111110 11112234
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 003158 751 SECVEKFIKLALKCCQDETDARPSMSEVMRELE 783 (843)
Q Consensus 751 ~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~ 783 (843)
...+..+.+++.+||+.+|.+||++.++++.|.
T Consensus 224 ~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 256 (257)
T cd05040 224 EACPQDIYNVMLQCWAHNPADRPTFAALREFLP 256 (257)
T ss_pred ccCCHHHHHHHHHHCCCCcccCCCHHHHHHHhc
Confidence 456678999999999999999999999998764
No 247
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=100.00 E-value=1.2e-35 Score=312.84 Aligned_cols=249 Identities=26% Similarity=0.398 Sum_probs=201.3
Q ss_pred CCCCCCcccccCCeeEEEEEe-CCCcEEEEEEeccCC--hhhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEEec
Q 003158 512 NFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 588 (843)
Q Consensus 512 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e~ 588 (843)
+|+..+.||+|+||.||.++. .+++.+++|.+.... ....+++.+|++++++++|+||+++++++.+.+..++||||
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~ 80 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEY 80 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEe
Confidence 588899999999999999985 468999999876532 34456788999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCCC
Q 003158 589 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 668 (843)
Q Consensus 589 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 668 (843)
+++++|.+++.......+++..+..++.|+++||.|||+.+ ++||||||+||++++++.+||+|||.+........
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~---i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~~- 156 (256)
T cd08221 81 ANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAG---ILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYS- 156 (256)
T ss_pred cCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCC---ccccCCChHhEEEeCCCCEEECcCcceEEcccccc-
Confidence 99999999997765566899999999999999999999998 99999999999999999999999999976543221
Q ss_pred CcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhccCCCCC
Q 003158 669 GIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGS 748 (843)
Q Consensus 669 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 748 (843)
......+++.|+|||.+.+..++.++|||||||++|||++|..||..... .+... .+..+....
T Consensus 157 ------~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~-~~~~~---------~~~~~~~~~ 220 (256)
T cd08221 157 ------MAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNP-LNLVV---------KIVQGNYTP 220 (256)
T ss_pred ------cccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCH-HHHHH---------HHHcCCCCC
Confidence 12334588999999999988899999999999999999999999965432 11111 112222223
Q ss_pred CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 003158 749 YPSECVEKFIKLALKCCQDETDARPSMSEVMR 780 (843)
Q Consensus 749 ~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~ 780 (843)
.+..++.++.+++.+||..+|.+||++.++++
T Consensus 221 ~~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~ 252 (256)
T cd08221 221 VVSVYSSELISLVHSLLQQDPEKRPTADEVLD 252 (256)
T ss_pred CccccCHHHHHHHHHHcccCcccCCCHHHHhh
Confidence 33445566777777777777777777776654
No 248
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=100.00 E-value=1.4e-35 Score=312.66 Aligned_cols=201 Identities=26% Similarity=0.404 Sum_probs=173.1
Q ss_pred CCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCC--hhhHHHHHHHHHHHHhccCCcccceeeeeec-CCcEEEEEe
Q 003158 512 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDE-EGEQMLVYE 587 (843)
Q Consensus 512 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~-~~~~~lV~e 587 (843)
+|++.+.||+|++|.||++... +++.||+|.+.... ....+.+.+|++++++++|+|++++++.+.. +...++|||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e 80 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMG 80 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEec
Confidence 4788899999999999999964 57899999986532 2334578899999999999999999998764 446799999
Q ss_pred cCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCC
Q 003158 588 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 667 (843)
Q Consensus 588 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~ 667 (843)
|+++++|.+++......++++.+++.++.|++.|++|||+.+ |+||||||+||+++.++.++|+|||++.......
T Consensus 81 ~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~~---i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~- 156 (257)
T cd08223 81 FCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKH---ILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQC- 156 (257)
T ss_pred ccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCchhEEEecCCcEEEecccceEEecccC-
Confidence 999999999998755567899999999999999999999999 9999999999999999999999999997654221
Q ss_pred CCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCC
Q 003158 668 EGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 722 (843)
Q Consensus 668 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~ 722 (843)
.......+++.|+|||+..+..++.++|||||||+++||++|+.||...
T Consensus 157 ------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~ 205 (257)
T cd08223 157 ------DMASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAK 205 (257)
T ss_pred ------CccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCC
Confidence 1123345788999999999999999999999999999999999998643
No 249
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=100.00 E-value=9.6e-37 Score=326.91 Aligned_cols=280 Identities=26% Similarity=0.374 Sum_probs=206.4
Q ss_pred cCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCCh--hhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEEe
Q 003158 511 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 587 (843)
Q Consensus 511 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e 587 (843)
++|+..+.||+|+||.||+|..+ +++.||+|++..... ...+.+.+|+++++.++||||+++++++..++..++|||
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFE 80 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEe
Confidence 46888999999999999999975 589999998764322 234678899999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCC
Q 003158 588 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 667 (843)
Q Consensus 588 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~ 667 (843)
|+++++|.++.... ..+++..++.++.|+++||+|||+.+ ++||||+|+||++++++.++|+|||++.......
T Consensus 81 ~~~~~~l~~~~~~~--~~~~~~~~~~~~~~i~~~l~~LH~~~---i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~- 154 (286)
T cd07846 81 FVDHTVLDDLEKYP--NGLDESRVRKYLFQILRGIEFCHSHN---IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPG- 154 (286)
T ss_pred cCCccHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEECCCCcEEEEeeeeeeeccCCc-
Confidence 99999998877543 34889999999999999999999998 9999999999999999999999999987654321
Q ss_pred CCcccceeeeeecccCCccCchhccc-CCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhccCCC
Q 003158 668 EGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNM 746 (843)
Q Consensus 668 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 746 (843)
.......++..|+|||++.+ ..++.++|||||||++|||++|+.||........ ..... ....
T Consensus 155 ------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~-~~~~~------~~~~--- 218 (286)
T cd07846 155 ------EVYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQ-LYHII------KCLG--- 218 (286)
T ss_pred ------cccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHH-HHHHH------HHhC---
Confidence 11223457889999999875 4578899999999999999999988865443221 11110 0000
Q ss_pred CCCCHHHHHHH--HHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCCCCccCCCCCcc
Q 003158 747 GSYPSECVEKF--IKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYV 823 (843)
Q Consensus 747 ~~~~~~~~~~l--~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~sa~e~L~Hp~f 823 (843)
.........+ ..+..... .|... .. .......+.......+++.+|+..+|++||+++++++||||
T Consensus 219 -~~~~~~~~~~~~~~~~~~~~--~~~~~----~~----~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~~~~ 286 (286)
T cd07846 219 -NLIPRHQEIFQKNPLFAGMR--LPEVK----EI----EPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHHEFF 286 (286)
T ss_pred -CCchhhHHHhccchHhhccc--ccccc----Cc----chHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhcCCCC
Confidence 0000000000 00001111 11110 00 01111233445566789999999999999999999999998
No 250
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=100.00 E-value=1.7e-35 Score=318.93 Aligned_cols=263 Identities=27% Similarity=0.412 Sum_probs=203.7
Q ss_pred HcCCCCCCcccccCCeeEEEEEeC-----------------CCcEEEEEEeccCC-hhhHHHHHHHHHHHHhccCCcccc
Q 003158 510 TNNFNSSTQIGQGGYGKVYKGILP-----------------DGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVS 571 (843)
Q Consensus 510 ~~~~~~~~~lg~G~~g~Vy~~~~~-----------------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~ 571 (843)
.++|++.+.||+|+||.||++... ++..||+|++.... ....+++.+|+++++.++|+||++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~ 83 (296)
T cd05095 4 RKRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIR 83 (296)
T ss_pred hhhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcce
Confidence 457899999999999999998532 24579999987543 334568899999999999999999
Q ss_pred eeeeeecCCcEEEEEecCCCCCHHHHHhhcCC---------CCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCc
Q 003158 572 LVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSK---------EPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASN 642 (843)
Q Consensus 572 l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~---------~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~N 642 (843)
+++++...+..++||||+++|+|.+++..... ..+++..+..++.|++.||+|||+.+ ++||||||+|
T Consensus 84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~---i~H~dlkp~N 160 (296)
T cd05095 84 LLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLN---FVHRDLATRN 160 (296)
T ss_pred EEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCC---eecccCChhe
Confidence 99999999999999999999999999976432 23667789999999999999999999 9999999999
Q ss_pred EEEcCCCcEEEeeccccccCCCCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHh--CCCCCC
Q 003158 643 ILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT--GMQPIS 720 (843)
Q Consensus 643 ILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~ellt--g~~pf~ 720 (843)
|++++++.++|+|||+++....... ........++..|+|||...+..++.++|||||||++|||++ |..||.
T Consensus 161 ili~~~~~~~l~dfg~~~~~~~~~~-----~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~ 235 (296)
T cd05095 161 CLVGKNYTIKIADFGMSRNLYSGDY-----YRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYS 235 (296)
T ss_pred EEEcCCCCEEeccCcccccccCCcc-----eeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCcc
Confidence 9999999999999999976532211 011122234678999999988899999999999999999998 777886
Q ss_pred CCcchHHHHHHHhhcccchhhccCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 003158 721 HGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELE 783 (843)
Q Consensus 721 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~ 783 (843)
..... +....... ...........+.+..++..+.+++.+||+.+|.+||++.++.+.|+
T Consensus 236 ~~~~~-~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~ 295 (296)
T cd05095 236 QLSDE-QVIENTGE--FFRDQGRQVYLPKPALCPDSLYKLMLSCWRRNAKERPSFQEIHATLL 295 (296)
T ss_pred ccChH-HHHHHHHH--HHhhccccccCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence 44321 11111000 00000001111223456688999999999999999999999998876
No 251
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=100.00 E-value=1e-35 Score=313.38 Aligned_cols=202 Identities=27% Similarity=0.422 Sum_probs=175.6
Q ss_pred CCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccC--ChhhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEEec
Q 003158 512 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEG--SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 588 (843)
Q Consensus 512 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e~ 588 (843)
+|++.+.||+|+||.||++... +++.||+|.+... .....+++.+|++++++++|+||+++++++...+..++||||
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDY 80 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEec
Confidence 5788999999999999999954 6899999998643 223346789999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCCC
Q 003158 589 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 668 (843)
Q Consensus 589 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 668 (843)
+++++|.+++.......+++..++.++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++.......
T Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~---i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~-- 155 (256)
T cd08218 81 CEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRK---ILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTV-- 155 (256)
T ss_pred CCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEEcCCCCEEEeeccceeecCcch--
Confidence 99999999997655556889999999999999999999998 9999999999999999999999999997654321
Q ss_pred CcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCc
Q 003158 669 GIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 723 (843)
Q Consensus 669 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~ 723 (843)
.......|++.|+|||+..+..++.++|||||||+++||++|+.||....
T Consensus 156 -----~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~ 205 (256)
T cd08218 156 -----ELARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGN 205 (256)
T ss_pred -----hhhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCC
Confidence 11123457889999999998889999999999999999999999997543
No 252
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=100.00 E-value=2.1e-35 Score=313.50 Aligned_cols=205 Identities=27% Similarity=0.394 Sum_probs=173.7
Q ss_pred HHHHcCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCChhhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEE
Q 003158 507 ALATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLV 585 (843)
Q Consensus 507 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV 585 (843)
+.+++++.....||+|+||.||+|... +++.||+|.+........+.+.+|+++++.++|+||+++++++..++..++|
T Consensus 4 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 83 (268)
T cd06624 4 EYEYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKIF 83 (268)
T ss_pred ccccccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEEEE
Confidence 445666777789999999999999954 6889999998876666677899999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhhcCCCCc--chhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcC-CCcEEEeeccccccC
Q 003158 586 YEFMSNGTLRDQLSAKSKEPL--GFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDH-KFTAKVADFGLSRLA 662 (843)
Q Consensus 586 ~e~~~~gsL~~~l~~~~~~~l--~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~-~~~~kl~DfGla~~~ 662 (843)
+||+++++|.+++.... .++ ++..+..++.||++||+|||+.+ |+||||||+||+++. ++.++|+|||.+...
T Consensus 84 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~~qi~~al~~lH~~~---i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~ 159 (268)
T cd06624 84 MEQVPGGSLSALLRSKW-GPLKDNEQTIIFYTKQILEGLKYLHDNQ---IVHRDIKGDNVLVNTYSGVVKISDFGTSKRL 159 (268)
T ss_pred EecCCCCCHHHHHHHhc-ccCCCcHHHHHHHHHHHHHHHHHHHHCC---EeecCCCHHHEEEcCCCCeEEEecchhheec
Confidence 99999999999997642 234 77888899999999999999998 999999999999986 679999999998755
Q ss_pred CCCCCCCcccceeeeeecccCCccCchhcccCC--CCchhhhHHHHHHHHHHHhCCCCCCCC
Q 003158 663 PVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHK--LTDKSDVYSLGVVFLELLTGMQPISHG 722 (843)
Q Consensus 663 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~sDvwS~G~~l~elltg~~pf~~~ 722 (843)
.... .......|+..|+|||++.+.. ++.++||||||+++|||++|+.||...
T Consensus 160 ~~~~-------~~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~ 214 (268)
T cd06624 160 AGIN-------PCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIEL 214 (268)
T ss_pred ccCC-------CccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccc
Confidence 3211 1112235788999999987643 788999999999999999999998643
No 253
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=100.00 E-value=1.9e-35 Score=311.92 Aligned_cols=248 Identities=35% Similarity=0.546 Sum_probs=206.7
Q ss_pred CcccccCCeeEEEEEeCC----CcEEEEEEeccCChhh-HHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEEecCCC
Q 003158 517 TQIGQGGYGKVYKGILPD----GTVVAVKRAQEGSLQG-EKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSN 591 (843)
Q Consensus 517 ~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e~~~~ 591 (843)
+.||+|+||.||+|.... +..||+|.+....... .+.+.+|+++++.++|+||+++++++...+..++||||+++
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEG 80 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEeccC
Confidence 469999999999999653 8899999998654433 57889999999999999999999999999999999999999
Q ss_pred CCHHHHHhhcC-------CCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCC
Q 003158 592 GTLRDQLSAKS-------KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPV 664 (843)
Q Consensus 592 gsL~~~l~~~~-------~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~ 664 (843)
++|.+++.... ...+++..++.++.|+++||+|||+++ ++||||||+||++++++.+||+|||.+.....
T Consensus 81 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~---i~H~di~p~nili~~~~~~~l~dfg~~~~~~~ 157 (262)
T cd00192 81 GDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKK---FVHRDLAARNCLVGEDLVVKISDFGLSRDVYD 157 (262)
T ss_pred CcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCC---cccCccCcceEEECCCCcEEEccccccccccc
Confidence 99999997642 356899999999999999999999998 99999999999999999999999999987653
Q ss_pred CCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHh-CCCCCCCCcchHHHHHHHhhcccchhhcc
Q 003158 665 PDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVID 743 (843)
Q Consensus 665 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 743 (843)
... ........++..|+|||.+....++.++||||+||++|||++ |..||..... .+... .+..
T Consensus 158 ~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~-~~~~~---------~~~~ 222 (262)
T cd00192 158 DDY-----YRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSN-EEVLE---------YLRK 222 (262)
T ss_pred ccc-----cccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCH-HHHHH---------HHHc
Confidence 321 111233457889999999998889999999999999999999 6999976532 11111 1222
Q ss_pred CCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 003158 744 GNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMREL 782 (843)
Q Consensus 744 ~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L 782 (843)
+.....+..++.++.+++.+||+.+|.+||++.++++.|
T Consensus 223 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l 261 (262)
T cd00192 223 GYRLPKPEYCPDELYELMLSCWQLDPEDRPTFSELVERL 261 (262)
T ss_pred CCCCCCCccCChHHHHHHHHHccCCcccCcCHHHHHHhh
Confidence 333345666788999999999999999999999998876
No 254
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=100.00 E-value=1.9e-35 Score=312.71 Aligned_cols=239 Identities=21% Similarity=0.371 Sum_probs=189.6
Q ss_pred CcccccCCeeEEEEEeCC-------------CcEEEEEEeccCChhhHHHHHHHHHHHHhccCCcccceeeeeecCCcEE
Q 003158 517 TQIGQGGYGKVYKGILPD-------------GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQM 583 (843)
Q Consensus 517 ~~lg~G~~g~Vy~~~~~~-------------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~ 583 (843)
+.||+|+||.||+|+... ...||+|.+........+.+.+|+.+++.++||||+++++++......+
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~~ 80 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVRDVENI 80 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCE
Confidence 468999999999998532 2358999887655455567889999999999999999999999999999
Q ss_pred EEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCc-------EEEeec
Q 003158 584 LVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFT-------AKVADF 656 (843)
Q Consensus 584 lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~-------~kl~Df 656 (843)
+||||+++|+|..++..+. ..+++..++.++.||++||+|||+++ |+||||||+|||++.++. ++++||
T Consensus 81 lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~ 156 (262)
T cd05077 81 MVEEFVEFGPLDLFMHRKS-DVLTTPWKFKVAKQLASALSYLEDKD---LVHGNVCTKNILLAREGIDGECGPFIKLSDP 156 (262)
T ss_pred EEEecccCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHhhhCC---eECCCCCcccEEEecCCccCCCCceeEeCCC
Confidence 9999999999999886543 45889999999999999999999998 999999999999987664 899999
Q ss_pred cccccCCCCCCCCcccceeeeeecccCCccCchhcc-cCCCCchhhhHHHHHHHHHHH-hCCCCCCCCcchHHHHHHHhh
Q 003158 657 GLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFL-THKLTDKSDVYSLGVVFLELL-TGMQPISHGKNIVREVNIAYQ 734 (843)
Q Consensus 657 Gla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~sDvwS~G~~l~ell-tg~~pf~~~~~~~~~~~~~~~ 734 (843)
|++...... ....++..|+|||.+. +..++.++|||||||++|||+ +|..||..... ..... ...
T Consensus 157 g~~~~~~~~-----------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~-~~~~~-~~~ 223 (262)
T cd05077 157 GIPITVLSR-----------QECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTL-AEKER-FYE 223 (262)
T ss_pred CCCccccCc-----------ccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcch-hHHHH-HHh
Confidence 998754311 2235778999999987 467899999999999999998 58878754321 11111 000
Q ss_pred cccchhhccCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 003158 735 SSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMREL 782 (843)
Q Consensus 735 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L 782 (843)
... .......+++.+++.+||+.+|.+||++.++++.+
T Consensus 224 ---------~~~-~~~~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~~ 261 (262)
T cd05077 224 ---------GQC-MLVTPSCKELADLMTHCMNYDPNQRPFFRAIMRDI 261 (262)
T ss_pred ---------cCc-cCCCCChHHHHHHHHHHcCCChhhCcCHHHHHHhc
Confidence 000 11122346788999999999999999999998765
No 255
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=100.00 E-value=8.6e-36 Score=321.11 Aligned_cols=281 Identities=24% Similarity=0.358 Sum_probs=204.9
Q ss_pred cCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCChh--hHHHHHHHHHHHHhcc-CCcccceeeeeecCCc-----
Q 003158 511 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ--GEKEFLTEIQFLSRLH-HRNLVSLVGYCDEEGE----- 581 (843)
Q Consensus 511 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~-h~nIv~l~~~~~~~~~----- 581 (843)
++|++.+.||+|+||.||+|... +++.||+|.+...... ....+.+|+.+++.++ |+||+++++++...+.
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~ 80 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPS 80 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCce
Confidence 46888999999999999999965 6899999987653222 2357888999999995 6999999999876655
Q ss_pred EEEEEecCCCCCHHHHHhhcC---CCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcC-CCcEEEeecc
Q 003158 582 QMLVYEFMSNGTLRDQLSAKS---KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDH-KFTAKVADFG 657 (843)
Q Consensus 582 ~~lV~e~~~~gsL~~~l~~~~---~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~-~~~~kl~DfG 657 (843)
.++||||+++ +|.+++.... ...+++..++.++.||++||.|||+++ |+||||||+||+++. ++.+||+|||
T Consensus 81 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~---i~H~dl~~~nil~~~~~~~~kl~dfg 156 (295)
T cd07837 81 LYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHG---VMHRDLKPQNLLVDKQKGLLKIADLG 156 (295)
T ss_pred EEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCChHHEEEecCCCeEEEeecc
Confidence 8999999975 8988886532 246899999999999999999999998 999999999999998 8899999999
Q ss_pred ccccCCCCCCCCcccceeeeeecccCCccCchhccc-CCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcc
Q 003158 658 LSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSS 736 (843)
Q Consensus 658 la~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~ 736 (843)
+++...... .......+++.|+|||++.+ ..++.++||||||+++|||++|..||........... .+.
T Consensus 157 ~~~~~~~~~-------~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~-~~~-- 226 (295)
T cd07837 157 LGRAFSIPV-------KSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLH-IFK-- 226 (295)
T ss_pred cceecCCCc-------cccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHH-HHH--
Confidence 987653221 11122346788999999875 4578999999999999999999999976544322211 110
Q ss_pred cchhhccCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCCCCcc
Q 003158 737 MMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSS 816 (843)
Q Consensus 737 ~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~sa~e 816 (843)
.+ ...+....+....+.... ..|..+|.. .....+..+..+.+||.+||..||++|+|++|
T Consensus 227 ----~~----~~~~~~~~~~~~~~~~~~--~~~~~~~~~---------~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~e 287 (295)
T cd07837 227 ----LL----GTPTEQVWPGVSKLRDWH--EFPQWKPQD---------LSRAVPDLSPEGLDLLQKMLRYDPAKRISAKA 287 (295)
T ss_pred ----Hh----CCCChhhCcchhhccchh--hcCcccchh---------HHHhccccCHHHHHHHHHHccCChhhcCCHHH
Confidence 00 001111111111110000 011111111 11122344556678999999999999999999
Q ss_pred CCCCCccc
Q 003158 817 MLKHPYVS 824 (843)
Q Consensus 817 ~L~Hp~f~ 824 (843)
++.||||.
T Consensus 288 il~~~~~~ 295 (295)
T cd07837 288 ALTHPYFD 295 (295)
T ss_pred HhcCCCcC
Confidence 99999985
No 256
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=100.00 E-value=3e-35 Score=311.70 Aligned_cols=206 Identities=28% Similarity=0.504 Sum_probs=174.5
Q ss_pred CCCCCCcccccCCeeEEEEEeCCCcEEEEEEeccCC------hhhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEE
Q 003158 512 NFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGS------LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLV 585 (843)
Q Consensus 512 ~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~------~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV 585 (843)
+|...+.||+|+||+||+|...+++.+|+|.+.... ....+.+.+|+++++.++|+||+++++++.+.+..++|
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 80 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIF 80 (265)
T ss_pred CccccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEE
Confidence 477889999999999999998889999999886432 11235688999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCC
Q 003158 586 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVP 665 (843)
Q Consensus 586 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~ 665 (843)
|||+++++|.+++.+.. ++++..+..++.|++.||+|||+.+ |+|+||||+||++++++.++|+|||.+......
T Consensus 81 ~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~ 155 (265)
T cd06631 81 MEFVPGGSISSILNRFG--PLPEPVFCKYTKQILDGVAYLHNNC---VVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWV 155 (265)
T ss_pred EecCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCC---cccCCcCHHhEEECCCCeEEeccchhhHhhhhc
Confidence 99999999999996543 5788999999999999999999998 999999999999999999999999998765321
Q ss_pred CCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCc
Q 003158 666 DIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 723 (843)
Q Consensus 666 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~ 723 (843)
..... .........|+..|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 156 ~~~~~-~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~ 212 (265)
T cd06631 156 GLHGT-HSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMD 212 (265)
T ss_pred ccccc-ccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCC
Confidence 11110 0111233468899999999999889999999999999999999999997543
No 257
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=100.00 E-value=1.7e-35 Score=317.08 Aligned_cols=267 Identities=25% Similarity=0.414 Sum_probs=205.7
Q ss_pred cCCCCCCcccccCCeeEEEEEe-----CCCcEEEEEEeccCC-hhhHHHHHHHHHHHHhccCCcccceeeeeecC--CcE
Q 003158 511 NNFNSSTQIGQGGYGKVYKGIL-----PDGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE--GEQ 582 (843)
Q Consensus 511 ~~~~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~--~~~ 582 (843)
..|++.+.||+|+||.||+|.. .++..||+|.+.... ....+.+.+|+++++.++||||+++++++.+. ...
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (284)
T cd05079 4 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI 83 (284)
T ss_pred hhhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCce
Confidence 3467889999999999999984 357899999987543 33346789999999999999999999998765 568
Q ss_pred EEEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccC
Q 003158 583 MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLA 662 (843)
Q Consensus 583 ~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~ 662 (843)
++||||+++++|.+++.... ..+++..+..++.|++.||+|||+++ ++||||||+||+++.++.++|+|||+++..
T Consensus 84 ~lv~e~~~g~~L~~~l~~~~-~~~~~~~~~~i~~~i~~aL~~lH~~g---i~H~dlkp~Nil~~~~~~~~l~dfg~~~~~ 159 (284)
T cd05079 84 KLIMEFLPSGSLKEYLPRNK-NKINLKQQLKYAVQICKGMDYLGSRQ---YVHRDLAARNVLVESEHQVKIGDFGLTKAI 159 (284)
T ss_pred EEEEEccCCCCHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCC---eeecccchheEEEcCCCCEEECCCcccccc
Confidence 99999999999999996543 35889999999999999999999999 999999999999999999999999999865
Q ss_pred CCCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHH----HHhh-ccc
Q 003158 663 PVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVN----IAYQ-SSM 737 (843)
Q Consensus 663 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~----~~~~-~~~ 737 (843)
...... ........++..|+|||++.+..++.++|||||||++|||++++.|............ .... ...
T Consensus 160 ~~~~~~----~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (284)
T cd05079 160 ETDKEY----YTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRL 235 (284)
T ss_pred ccCccc----eeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHH
Confidence 432210 1111234567789999999988899999999999999999998776533211000000 0000 000
Q ss_pred chhhccCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHh
Q 003158 738 MFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 785 (843)
Q Consensus 738 ~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~ 785 (843)
......+...+.+..++..+.+++.+|++.+|++||++.++++.++.+
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~ 283 (284)
T cd05079 236 VRVLEEGKRLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAI 283 (284)
T ss_pred HHHHHcCccCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHHhh
Confidence 001111222233455678899999999999999999999999998875
No 258
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=100.00 E-value=1.7e-35 Score=311.84 Aligned_cols=251 Identities=31% Similarity=0.515 Sum_probs=203.6
Q ss_pred cCCCCCCcccccCCeeEEEEEeCCCcEEEEEEeccCChhhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEEecCC
Q 003158 511 NNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMS 590 (843)
Q Consensus 511 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e~~~ 590 (843)
.+|+..+.||+|+||.||+|.+.+++.+|+|.+.... ....++.+|++++++++||||+++++++......++||||++
T Consensus 4 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~ 82 (256)
T cd05112 4 SELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGA-MSEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEFME 82 (256)
T ss_pred hHeEEEeeecCcccceEEEEEEeCCCeEEEEECCCCC-CCHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEcCC
Confidence 4677889999999999999998778899999887533 234578999999999999999999999999999999999999
Q ss_pred CCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCCCCc
Q 003158 591 NGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGI 670 (843)
Q Consensus 591 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~ 670 (843)
+++|.+++.... ..+++..++.++.|++.|++|||+.+ ++||||||+||+++.++.+||+|||.+.......
T Consensus 83 ~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lH~~~---i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~---- 154 (256)
T cd05112 83 HGCLSDYLRAQR-GKFSQETLLGMCLDVCEGMAYLESSN---VIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQ---- 154 (256)
T ss_pred CCcHHHHHHhCc-cCCCHHHHHHHHHHHHHHHHHHHHCC---ccccccccceEEEcCCCeEEECCCcceeecccCc----
Confidence 999999986543 35788999999999999999999998 9999999999999999999999999987543221
Q ss_pred ccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHh-CCCCCCCCcchHHHHHHHhhcccchhhccCCCCCC
Q 003158 671 VPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSY 749 (843)
Q Consensus 671 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 749 (843)
........++.+|+|||.+.+..++.++||||||+++|||++ |+.||..... ...... +..+.....
T Consensus 155 --~~~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~-~~~~~~---------~~~~~~~~~ 222 (256)
T cd05112 155 --YTSSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSN-SEVVET---------INAGFRLYK 222 (256)
T ss_pred --ccccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCH-HHHHHH---------HhCCCCCCC
Confidence 011122235578999999998899999999999999999998 9999875432 111111 111111112
Q ss_pred CHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 003158 750 PSECVEKFIKLALKCCQDETDARPSMSEVMREL 782 (843)
Q Consensus 750 ~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L 782 (843)
+...+..+.+++.+||+.+|++||++.++++.|
T Consensus 223 ~~~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~l 255 (256)
T cd05112 223 PRLASQSVYELMQHCWKERPEDRPSFSLLLHQL 255 (256)
T ss_pred CCCCCHHHHHHHHHHcccChhhCCCHHHHHHhh
Confidence 333467899999999999999999999999876
No 259
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=100.00 E-value=2.7e-35 Score=315.12 Aligned_cols=200 Identities=27% Similarity=0.415 Sum_probs=172.0
Q ss_pred CCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCChhhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEEecCC
Q 003158 512 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMS 590 (843)
Q Consensus 512 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e~~~ 590 (843)
-|++.+.||+|+||.||+|... ++..+|+|.+........+.+.+|+++++.++||||+++++++...+..++||||++
T Consensus 6 ~~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~~ 85 (282)
T cd06643 6 FWEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCA 85 (282)
T ss_pred HHHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEecC
Confidence 3667788999999999999975 578899999876555556788999999999999999999999999999999999999
Q ss_pred CCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCCCCc
Q 003158 591 NGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGI 670 (843)
Q Consensus 591 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~ 670 (843)
+++|.+++... ..++++..+..++.|+++||.|||+.+ ++||||||+||+++.++.+||+|||++.......
T Consensus 86 ~~~l~~~~~~~-~~~l~~~~~~~~~~qi~~~L~~LH~~~---i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~---- 157 (282)
T cd06643 86 GGAVDAVMLEL-ERPLTEPQIRVVCKQTLEALNYLHENK---IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTI---- 157 (282)
T ss_pred CCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCcccEEEccCCCEEEccccccccccccc----
Confidence 99999988653 346899999999999999999999998 9999999999999999999999999987543211
Q ss_pred ccceeeeeecccCCccCchhcc-----cCCCCchhhhHHHHHHHHHHHhCCCCCCCC
Q 003158 671 VPAHVSTVVKGTPGYLDPEYFL-----THKLTDKSDVYSLGVVFLELLTGMQPISHG 722 (843)
Q Consensus 671 ~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDvwS~G~~l~elltg~~pf~~~ 722 (843)
.......++..|+|||++. +..++.++|||||||++|||++|+.||...
T Consensus 158 ---~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~ 211 (282)
T cd06643 158 ---QRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHEL 211 (282)
T ss_pred ---cccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCcccc
Confidence 1122345889999999984 345778999999999999999999998654
No 260
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=100.00 E-value=2.9e-35 Score=312.05 Aligned_cols=206 Identities=27% Similarity=0.479 Sum_probs=173.1
Q ss_pred CCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCChh---------hHHHHHHHHHHHHhccCCcccceeeeeecCCc
Q 003158 512 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ---------GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGE 581 (843)
Q Consensus 512 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~---------~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~ 581 (843)
+|.+...||+|+||.||+|... +++.||+|.+...... ..+.+.+|+.++++++||||+++++++.+.+.
T Consensus 1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 80 (267)
T cd06628 1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADH 80 (267)
T ss_pred CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCc
Confidence 4677889999999999999864 6889999988643221 12567899999999999999999999999999
Q ss_pred EEEEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeecccccc
Q 003158 582 QMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRL 661 (843)
Q Consensus 582 ~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~ 661 (843)
.++||||+++++|.+++... ..+++..+..++.|++.||+|||+.+ ++||||+|+||++++++.++|+|||.++.
T Consensus 81 ~~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~~l~~~l~~lH~~~---ivH~di~p~nil~~~~~~~~l~dfg~~~~ 155 (267)
T cd06628 81 LNIFLEYVPGGSVAALLNNY--GAFEETLVRNFVRQILKGLNYLHNRG---IIHRDIKGANILVDNKGGIKISDFGISKK 155 (267)
T ss_pred cEEEEEecCCCCHHHHHHhc--cCccHHHHHHHHHHHHHHHHHHHhcC---cccccCCHHHEEEcCCCCEEecccCCCcc
Confidence 99999999999999999654 35788889999999999999999998 99999999999999999999999999987
Q ss_pred CCCCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCc
Q 003158 662 APVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 723 (843)
Q Consensus 662 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~ 723 (843)
......... .........|+..|+|||.+.+..++.++||||+||++|||++|+.||....
T Consensus 156 ~~~~~~~~~-~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~ 216 (267)
T cd06628 156 LEANSLSTK-TNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCT 216 (267)
T ss_pred cccccccCC-ccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCcc
Confidence 642211100 0111123458889999999998889999999999999999999999997543
No 261
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=100.00 E-value=3.5e-35 Score=308.41 Aligned_cols=248 Identities=30% Similarity=0.488 Sum_probs=201.6
Q ss_pred CcccccCCeeEEEEEeCCCcEEEEEEeccCChh-hHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEEecCCCCCHH
Q 003158 517 TQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQ-GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLR 595 (843)
Q Consensus 517 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e~~~~gsL~ 595 (843)
++||+|+||.||+|...+++.||+|.+...... ..+.+.+|+++++.++|+||+++++++.+....++||||+++++|.
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~ 80 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSLL 80 (251)
T ss_pred CccccCCCceEEEEEEeCCCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCcHH
Confidence 468999999999999877999999998764433 4567899999999999999999999999999999999999999999
Q ss_pred HHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCCCCccccee
Q 003158 596 DQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHV 675 (843)
Q Consensus 596 ~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~ 675 (843)
+++.... ..+++..+..++.+++.||+|||+.+ ++||||||+||+++.++.+||+|||.+........ ...
T Consensus 81 ~~l~~~~-~~~~~~~~~~~~~~~~~~l~~lH~~~---i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~-----~~~ 151 (251)
T cd05041 81 TFLRKKK-NRLTVKKLLQMSLDAAAGMEYLESKN---CIHRDLAARNCLVGENNVLKISDFGMSREEEGGIY-----TVS 151 (251)
T ss_pred HHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCC---EehhhcCcceEEEcCCCcEEEeeccccccccCCcc-----eec
Confidence 9996543 35788899999999999999999998 99999999999999999999999999976432110 000
Q ss_pred eeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHh-CCCCCCCCcchHHHHHHHhhcccchhhccCCCCCCCHHHH
Q 003158 676 STVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECV 754 (843)
Q Consensus 676 ~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 754 (843)
......+..|+|||.+.+..++.++|||||||++|||+| |..||...... ..... +........+...+
T Consensus 152 ~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~-~~~~~---------~~~~~~~~~~~~~~ 221 (251)
T cd05041 152 DGLKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQ-QTRER---------IESGYRMPAPQLCP 221 (251)
T ss_pred cccCcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHH-HHHHH---------HhcCCCCCCCccCC
Confidence 111223567999999998899999999999999999999 88888654321 11111 11111223455667
Q ss_pred HHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 003158 755 EKFIKLALKCCQDETDARPSMSEVMRELE 783 (843)
Q Consensus 755 ~~l~~l~~~c~~~~p~~RPs~~~vl~~L~ 783 (843)
..+.+++.+||..+|.+||++.++++.|+
T Consensus 222 ~~~~~li~~~l~~~p~~Rp~~~ell~~l~ 250 (251)
T cd05041 222 EEIYRLMLQCWAYDPENRPSFSEIYNELQ 250 (251)
T ss_pred HHHHHHHHHHhccChhhCcCHHHHHHHhh
Confidence 88999999999999999999999998875
No 262
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=100.00 E-value=7.4e-37 Score=301.38 Aligned_cols=261 Identities=21% Similarity=0.301 Sum_probs=206.3
Q ss_pred HcCCCCC-CcccccCCeeEEEEEeC-CCcEEEEEEeccCChhhHHHHHHHHHHHHhc-cCCcccceeeeeec----CCcE
Q 003158 510 TNNFNSS-TQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDE----EGEQ 582 (843)
Q Consensus 510 ~~~~~~~-~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~----~~~~ 582 (843)
+++|.+. ++||-|-.|+|-.+..+ +|+.+|+|++.+. ....+|++.--.. .|||||.++++|.. ...+
T Consensus 60 tedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds-----~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkcL 134 (400)
T KOG0604|consen 60 TEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDS-----PKARREVELHWMASGHPHIVSIIDVYENSYQGRKCL 134 (400)
T ss_pred hhhheehhhhhccccCCceEEEEeccchhhhHHHHHhcC-----HHHHhHhhhhhhhcCCCceEEeehhhhhhccCceee
Confidence 4556553 57999999999999854 7999999998742 3456788754333 69999999999843 4577
Q ss_pred EEEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcC---CCcEEEeecccc
Q 003158 583 MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDH---KFTAKVADFGLS 659 (843)
Q Consensus 583 ~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~---~~~~kl~DfGla 659 (843)
.+|||.|+||.|...+++++...+++.++-.|+.||+.|+.|||+.+ |.||||||+|+|... +..+||+|||+|
T Consensus 135 LiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~n---IAHRDlKpENLLyt~t~~na~lKLtDfGFA 211 (400)
T KOG0604|consen 135 LIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSMN---IAHRDLKPENLLYTTTSPNAPLKLTDFGFA 211 (400)
T ss_pred EeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhcc---hhhccCChhheeeecCCCCcceEecccccc
Confidence 89999999999999999999999999999999999999999999999 999999999999964 557999999999
Q ss_pred ccCCCCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccch
Q 003158 660 RLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMF 739 (843)
Q Consensus 660 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~ 739 (843)
+.-.. .........|+.|.|||++...+|+...|+||+||++|-|+.|.+||....... ....+.
T Consensus 212 K~t~~--------~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~a-------ispgMk 276 (400)
T KOG0604|consen 212 KETQE--------PGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLA-------ISPGMK 276 (400)
T ss_pred cccCC--------CccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCcc-------CChhHH
Confidence 86542 122345668999999999999999999999999999999999999997543210 011111
Q ss_pred hhccCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCCCCccCCC
Q 003158 740 SVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLK 819 (843)
Q Consensus 740 ~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~sa~e~L~ 819 (843)
..+...-..||.+.|..+.+ .++|+|+.+|+.+|++|+|.+|.++
T Consensus 277 ~rI~~gqy~FP~pEWs~VSe-----------------------------------~aKdlIR~LLkt~PteRlTI~~~m~ 321 (400)
T KOG0604|consen 277 RRIRTGQYEFPEPEWSCVSE-----------------------------------AAKDLIRKLLKTEPTERLTIEEVMD 321 (400)
T ss_pred hHhhccCccCCChhHhHHHH-----------------------------------HHHHHHHHHhcCCchhheeHHHhhc
Confidence 22222223445544443322 2347899999999999999999999
Q ss_pred CCcccCCCC
Q 003158 820 HPYVSSDVS 828 (843)
Q Consensus 820 Hp~f~~~~~ 828 (843)
|||+.+...
T Consensus 322 hpwi~~~~~ 330 (400)
T KOG0604|consen 322 HPWINQYEA 330 (400)
T ss_pred Cchhccccc
Confidence 999987654
No 263
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=100.00 E-value=1.1e-35 Score=315.36 Aligned_cols=254 Identities=22% Similarity=0.334 Sum_probs=195.1
Q ss_pred HHHHHHcCCCCCCcc--cccCCeeEEEEEe-CCCcEEEEEEeccCChhhHHHHHHHHHHHHhc-cCCcccceeeeeecCC
Q 003158 505 EMALATNNFNSSTQI--GQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEG 580 (843)
Q Consensus 505 ~~~~~~~~~~~~~~l--g~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~ 580 (843)
+.....++|++.+.+ |+|+||.||++.. .+++.+|+|.+........ |+.....+ +|+||+++++++...+
T Consensus 8 ~~~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~-----e~~~~~~~~~h~~iv~~~~~~~~~~ 82 (267)
T PHA03390 8 ELVQFLKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNAI-----EPMVHQLMKDNPNFIKLYYSVTTLK 82 (267)
T ss_pred HHHHHHHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcchh-----hHHHHHHhhcCCCEEEEEEEEecCC
Confidence 444455677777776 9999999999995 4688999999875322211 22222222 7999999999999999
Q ss_pred cEEEEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCC-cEEEeecccc
Q 003158 581 EQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKF-TAKVADFGLS 659 (843)
Q Consensus 581 ~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~-~~kl~DfGla 659 (843)
..++||||+++++|.+++.... ++++..++.++.|+++||.|||+.+ ++||||||+||+++.++ .++|+|||++
T Consensus 83 ~~~iv~e~~~~~~L~~~l~~~~--~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~nil~~~~~~~~~l~dfg~~ 157 (267)
T PHA03390 83 GHVLIMDYIKDGDLFDLLKKEG--KLSEAEVKKIIRQLVEALNDLHKHN---IIHNDIKLENVLYDRAKDRIYLCDYGLC 157 (267)
T ss_pred eeEEEEEcCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEEeCCCCeEEEecCccc
Confidence 9999999999999999997653 6899999999999999999999999 99999999999999998 9999999998
Q ss_pred ccCCCCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccch
Q 003158 660 RLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMF 739 (843)
Q Consensus 660 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~ 739 (843)
...... ....++..|+|||++.+..++.++|||||||++|||++|+.||.......-.
T Consensus 158 ~~~~~~-----------~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~----------- 215 (267)
T PHA03390 158 KIIGTP-----------SCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELD----------- 215 (267)
T ss_pred eecCCC-----------ccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhh-----------
Confidence 765321 1235788999999999989999999999999999999999999743211000
Q ss_pred hhccCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCCCC-ccCC
Q 003158 740 SVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSS-SSML 818 (843)
Q Consensus 740 ~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~sa-~e~L 818 (843)
...+. ......+ ...+..++.+.+||.+||+.||.+|+++ +|+|
T Consensus 216 --------------~~~~~----~~~~~~~-----------------~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l 260 (267)
T PHA03390 216 --------------LESLL----KRQQKKL-----------------PFIKNVSKNANDFVQSMLKYNINYRLTNYNEII 260 (267)
T ss_pred --------------HHHHH----HhhcccC-----------------CcccccCHHHHHHHHHHhccChhhCCchHHHHh
Confidence 00000 0000000 0011233445678999999999999975 9999
Q ss_pred CCCcccC
Q 003158 819 KHPYVSS 825 (843)
Q Consensus 819 ~Hp~f~~ 825 (843)
+||||.+
T Consensus 261 ~h~~~~~ 267 (267)
T PHA03390 261 KHPFLKI 267 (267)
T ss_pred cCCcccC
Confidence 9999964
No 264
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=100.00 E-value=5.1e-35 Score=310.68 Aligned_cols=253 Identities=27% Similarity=0.357 Sum_probs=192.2
Q ss_pred CcccccCCeeEEEEEeCC---CcEEEEEEeccCC-hhhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEEecCCCC
Q 003158 517 TQIGQGGYGKVYKGILPD---GTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNG 592 (843)
Q Consensus 517 ~~lg~G~~g~Vy~~~~~~---~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e~~~~g 592 (843)
+.||+|+||.||+|.+.+ +..+|+|.+.... ......+.+|+.++++++||||+++++++.+....++||||+++|
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g 80 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPLG 80 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCCC
Confidence 368999999999998643 4679999887543 233457889999999999999999999999999999999999999
Q ss_pred CHHHHHhhcC---CCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCCCC
Q 003158 593 TLRDQLSAKS---KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEG 669 (843)
Q Consensus 593 sL~~~l~~~~---~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~ 669 (843)
+|.+++.... ....++..+..++.|++.||+|||+.+ ++||||||+||+++.++.+||+|||.++.......
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~-- 155 (269)
T cd05087 81 DLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNN---FIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDY-- 155 (269)
T ss_pred cHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCC---EeccccCcceEEEcCCCcEEECCccccccccCcce--
Confidence 9999997532 224567778889999999999999999 99999999999999999999999999875432211
Q ss_pred cccceeeeeecccCCccCchhcccC-------CCCchhhhHHHHHHHHHHHh-CCCCCCCCcchHHHHHHHhhcccchhh
Q 003158 670 IVPAHVSTVVKGTPGYLDPEYFLTH-------KLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSV 741 (843)
Q Consensus 670 ~~~~~~~~~~~gt~~y~aPE~~~~~-------~~~~~sDvwS~G~~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~ 741 (843)
........++..|+|||++.+. .++.++|||||||++|||++ |+.||........ ......... ...
T Consensus 156 ---~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~-~~~~~~~~~-~~~ 230 (269)
T cd05087 156 ---YVTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQV-LTYTVREQQ-LKL 230 (269)
T ss_pred ---eecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHH-HHHHhhccc-CCC
Confidence 0111234567889999998642 35789999999999999997 9999975443221 111111100 011
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 003158 742 IDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELE 783 (843)
Q Consensus 742 ~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~ 783 (843)
. .+......++.+.+++..|| .+|++||+++++++.|+
T Consensus 231 ~---~~~~~~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~ 268 (269)
T cd05087 231 P---KPRLKLPLSDRWYEVMQFCW-LQPEQRPSAEEVHLLLS 268 (269)
T ss_pred C---CCccCCCCChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence 1 11112234566888999999 57999999999998764
No 265
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=100.00 E-value=5.3e-35 Score=312.34 Aligned_cols=258 Identities=27% Similarity=0.460 Sum_probs=207.6
Q ss_pred HcCCCCCCcccccCCeeEEEEEeC-CCc----EEEEEEeccCCh-hhHHHHHHHHHHHHhccCCcccceeeeeecCCcEE
Q 003158 510 TNNFNSSTQIGQGGYGKVYKGILP-DGT----VVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQM 583 (843)
Q Consensus 510 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~----~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~ 583 (843)
..+|++.+.||+|+||+||+|... +|+ .||+|.+..... ....++.+|+.++++++|+||+++++++.. ...+
T Consensus 6 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~ 84 (279)
T cd05057 6 ETELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS-SQVQ 84 (279)
T ss_pred HHHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-CceE
Confidence 356788899999999999999964 333 689998875543 345678899999999999999999999987 7899
Q ss_pred EEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCC
Q 003158 584 LVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAP 663 (843)
Q Consensus 584 lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~ 663 (843)
+||||+++|+|.+++.... ..+++..+..++.|++.||+|||+.+ |+||||||+||++++++.+||+|||.++...
T Consensus 85 ~v~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~LH~~~---i~H~di~p~nil~~~~~~~kL~dfg~~~~~~ 160 (279)
T cd05057 85 LITQLMPLGCLLDYVRNHK-DNIGSQYLLNWCVQIAKGMSYLEEKR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLD 160 (279)
T ss_pred EEEecCCCCcHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhCC---EEecccCcceEEEcCCCeEEECCCccccccc
Confidence 9999999999999997643 34889999999999999999999988 9999999999999999999999999998764
Q ss_pred CCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHh-CCCCCCCCcchHHHHHHHhhcccchhhc
Q 003158 664 VPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVI 742 (843)
Q Consensus 664 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 742 (843)
.... ........++..|+|||.+....++.++|||||||++||+++ |+.||..... .+... .+.
T Consensus 161 ~~~~-----~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~-~~~~~---------~~~ 225 (279)
T cd05057 161 VDEK-----EYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPA-VEIPD---------LLE 225 (279)
T ss_pred Cccc-----ceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCH-HHHHH---------HHh
Confidence 3211 011112224568999999988889999999999999999999 9999975432 11111 111
Q ss_pred cCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhh
Q 003158 743 DGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWN 787 (843)
Q Consensus 743 ~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~ 787 (843)
.+.....+..+...+.+++.+||..+|..||++.++++.++++.+
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~~~ 270 (279)
T cd05057 226 KGERLPQPPICTIDVYMVLVKCWMIDAESRPTFKELINEFSKMAR 270 (279)
T ss_pred CCCCCCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence 122223344566788999999999999999999999999998754
No 266
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=100.00 E-value=2.1e-35 Score=310.84 Aligned_cols=247 Identities=30% Similarity=0.480 Sum_probs=202.0
Q ss_pred cCCCCCCcccccCCeeEEEEEeCCCcEEEEEEeccCChhhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEEecCC
Q 003158 511 NNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMS 590 (843)
Q Consensus 511 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e~~~ 590 (843)
++|++.+.||+|+||.||+|.. +++.||+|.+.... ..+.+.+|+.+++.++||||+++++++..+ ..++||||++
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~-~~~~~~iK~~~~~~--~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~~v~e~~~ 81 (254)
T cd05083 6 QKLTLGEIIGEGEFGAVLQGEY-TGQKVAVKNIKCDV--TAQAFLEETAVMTKLHHKNLVRLLGVILHN-GLYIVMELMS 81 (254)
T ss_pred HHceeeeeeccCCCCceEeccc-CCCceEEEeecCcc--hHHHHHHHHHHHHhCCCCCcCeEEEEEcCC-CcEEEEECCC
Confidence 4688899999999999999975 67889999986532 345788999999999999999999998754 4799999999
Q ss_pred CCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCCCCc
Q 003158 591 NGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGI 670 (843)
Q Consensus 591 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~ 670 (843)
+++|.+++.......+++..++.++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||.+......
T Consensus 82 ~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~----- 153 (254)
T cd05083 82 KGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKK---LVHRDLAARNILVSEDGVAKVSDFGLARVGSMG----- 153 (254)
T ss_pred CCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccccCcceEEEcCCCcEEECCCccceecccc-----
Confidence 999999998766556889999999999999999999998 999999999999999999999999998754211
Q ss_pred ccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHh-CCCCCCCCcchHHHHHHHhhcccchhhccCCCCCC
Q 003158 671 VPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSY 749 (843)
Q Consensus 671 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 749 (843)
......+..|+|||.+.+..++.++|||||||++|||++ |+.||...... .... .. ..+.....
T Consensus 154 -----~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~-~~~~-~~--------~~~~~~~~ 218 (254)
T cd05083 154 -----VDNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLK-EVKE-CV--------EKGYRMEP 218 (254)
T ss_pred -----CCCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHH-HHHH-HH--------hCCCCCCC
Confidence 111234567999999998899999999999999999998 99998654321 1111 11 11112233
Q ss_pred CHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 003158 750 PSECVEKFIKLALKCCQDETDARPSMSEVMRELES 784 (843)
Q Consensus 750 ~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~ 784 (843)
+..++..+.+++.+||+.+|++||++++++..+++
T Consensus 219 ~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 253 (254)
T cd05083 219 PEGCPADVYVLMTSCWETEPKKRPSFHKLREKLEK 253 (254)
T ss_pred CCcCCHHHHHHHHHHcCCChhhCcCHHHHHHHHcc
Confidence 45567888999999999999999999999988763
No 267
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=4.6e-35 Score=313.93 Aligned_cols=200 Identities=25% Similarity=0.417 Sum_probs=170.6
Q ss_pred cCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCC-hhhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEEec
Q 003158 511 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 588 (843)
Q Consensus 511 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e~ 588 (843)
++|++.+.||+|+||.||+|... +++.||+|.+.... ......+.+|++++++++|+||+++++++...+..++||||
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (286)
T cd06622 1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEY 80 (286)
T ss_pred ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEee
Confidence 36888999999999999999975 78999999887532 22346788999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcC-CCCcchhHHHHHHHHHHHHHHHHhc-CCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCC
Q 003158 589 MSNGTLRDQLSAKS-KEPLGFAMRLSIALGSSRGILYLHT-EADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 666 (843)
Q Consensus 589 ~~~gsL~~~l~~~~-~~~l~~~~~~~i~~~ia~aL~yLH~-~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~ 666 (843)
+++++|.+++.... ...+++..+..++.|+++||.|||+ .+ |+||||||+||+++.++.+||+|||++......
T Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~- 156 (286)
T cd06622 81 MDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHN---IIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVAS- 156 (286)
T ss_pred cCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCC---EeeCCCCHHHEEECCCCCEEEeecCCcccccCC-
Confidence 99999999986532 2368999999999999999999997 46 999999999999999999999999998755321
Q ss_pred CCCcccceeeeeecccCCccCchhcccCC------CCchhhhHHHHHHHHHHHhCCCCCCCC
Q 003158 667 IEGIVPAHVSTVVKGTPGYLDPEYFLTHK------LTDKSDVYSLGVVFLELLTGMQPISHG 722 (843)
Q Consensus 667 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~------~~~~sDvwS~G~~l~elltg~~pf~~~ 722 (843)
......++..|+|||.+.+.. ++.++|||||||++|||++|+.||...
T Consensus 157 --------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~ 210 (286)
T cd06622 157 --------LAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPE 210 (286)
T ss_pred --------ccccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCc
Confidence 112335788999999986543 478999999999999999999999653
No 268
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=100.00 E-value=2.4e-35 Score=319.23 Aligned_cols=207 Identities=24% Similarity=0.387 Sum_probs=172.9
Q ss_pred cCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCCh---hhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEE
Q 003158 511 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 586 (843)
Q Consensus 511 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~ 586 (843)
++|+..+.||+|+||.||++... .++.||+|.+..... ...+.+.+|+++++.++||||+++++++..++..++||
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (305)
T cd05609 1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVM 80 (305)
T ss_pred CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEE
Confidence 36888999999999999999965 578999999875432 22457789999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCC
Q 003158 587 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 666 (843)
Q Consensus 587 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~ 666 (843)
||+++++|.+++... ..+++..+..++.|+++||+|||+.+ ++||||||+||+++.++.+||+|||+++......
T Consensus 81 e~~~g~~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~ 155 (305)
T cd05609 81 EYVEGGDCATLLKNI--GALPVDMARMYFAETVLALEYLHNYG---IVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSL 155 (305)
T ss_pred ecCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCchHHEEECCCCCEEEeeCCCccccCcCc
Confidence 999999999999654 35888899999999999999999998 9999999999999999999999999987422111
Q ss_pred CCCc--------ccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCC
Q 003158 667 IEGI--------VPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 722 (843)
Q Consensus 667 ~~~~--------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~ 722 (843)
.... ..........++..|+|||.+.+..++.++|+|||||++|||++|..||...
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~ 219 (305)
T cd05609 156 TTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGD 219 (305)
T ss_pred cccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 0000 0001112245788999999999888999999999999999999999999754
No 269
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=100.00 E-value=2.2e-35 Score=313.30 Aligned_cols=249 Identities=32% Similarity=0.508 Sum_probs=200.3
Q ss_pred CcccccCCeeEEEEEeCC-------CcEEEEEEeccCC-hhhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEEec
Q 003158 517 TQIGQGGYGKVYKGILPD-------GTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 588 (843)
Q Consensus 517 ~~lg~G~~g~Vy~~~~~~-------~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e~ 588 (843)
+.||+|+||.||+|...+ ++.||+|.+.... .....++.+|+++++.++||||+++++++...+..++||||
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMEL 80 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEec
Confidence 368999999999998642 2579999886543 23456788999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcC-----CCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCC-----cEEEeeccc
Q 003158 589 MSNGTLRDQLSAKS-----KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKF-----TAKVADFGL 658 (843)
Q Consensus 589 ~~~gsL~~~l~~~~-----~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~-----~~kl~DfGl 658 (843)
+++++|.+++.... ...+++..++.++.|++.||+|||+.+ ++|+||||+||+++.++ .++++|||+
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~---i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~ 157 (269)
T cd05044 81 MEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMH---FIHRDLAARNCLVSEKGYDADRVVKIGDFGL 157 (269)
T ss_pred cCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCC---cccCCCChheEEEecCCCCCCcceEECCccc
Confidence 99999999997532 234788999999999999999999998 99999999999999887 899999999
Q ss_pred cccCCCCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHh-CCCCCCCCcchHHHHHHHhhccc
Q 003158 659 SRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSM 737 (843)
Q Consensus 659 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~ 737 (843)
+......... .......++..|+|||++.+..++.++|||||||++|||++ |+.||....... ...
T Consensus 158 ~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~~-~~~------- 224 (269)
T cd05044 158 ARDIYKSDYY-----RKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQE-VLQ------- 224 (269)
T ss_pred cccccccccc-----ccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCHHH-HHH-------
Confidence 9765432211 11122345678999999999999999999999999999998 999986544321 111
Q ss_pred chhhccCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 003158 738 MFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELE 783 (843)
Q Consensus 738 ~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~ 783 (843)
.+..+.....+...+..+.+++.+||..+|.+||++.++.+.|+
T Consensus 225 --~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~ 268 (269)
T cd05044 225 --HVTAGGRLQKPENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQ 268 (269)
T ss_pred --HHhcCCccCCcccchHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence 11112222345566788999999999999999999999998876
No 270
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=100.00 E-value=2.9e-35 Score=313.49 Aligned_cols=199 Identities=31% Similarity=0.429 Sum_probs=175.1
Q ss_pred cCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCC-hhhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEEec
Q 003158 511 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 588 (843)
Q Consensus 511 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e~ 588 (843)
++|+..+.||.|+||.||+|... +++.||+|.+.... ......+.+|+++++.++|+||+++++++.++...++|+||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (274)
T cd06609 1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEY 80 (274)
T ss_pred ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEEe
Confidence 46888899999999999999965 68999999987543 33346788999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCCC
Q 003158 589 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 668 (843)
Q Consensus 589 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 668 (843)
+++++|.+++... ++++..++.++.|++.||.|||+.+ ++||||+|+||++++++.++|+|||+++......
T Consensus 81 ~~~~~L~~~~~~~---~~~~~~~~~~~~ql~~~l~~lh~~~---i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~-- 152 (274)
T cd06609 81 CGGGSCLDLLKPG---KLDETYIAFILREVLLGLEYLHEEG---KIHRDIKAANILLSEEGDVKLADFGVSGQLTSTM-- 152 (274)
T ss_pred eCCCcHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEECCCCCEEEcccccceeecccc--
Confidence 9999999999654 6889999999999999999999998 9999999999999999999999999998765321
Q ss_pred CcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCC
Q 003158 669 GIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 722 (843)
Q Consensus 669 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~ 722 (843)
.......++..|+|||.+.+..++.++|||||||++|||++|+.||...
T Consensus 153 -----~~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~ 201 (274)
T cd06609 153 -----SKRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDL 201 (274)
T ss_pred -----cccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccC
Confidence 1123345788999999999988999999999999999999999999654
No 271
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=100.00 E-value=1.1e-35 Score=321.42 Aligned_cols=276 Identities=26% Similarity=0.337 Sum_probs=207.5
Q ss_pred HHHcCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCCh--hhHHHHHHHHHHHHhccCCcccceeeeeecCC----
Q 003158 508 LATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEG---- 580 (843)
Q Consensus 508 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~---- 580 (843)
...++|++.+.||+|+||.||+|... +++.||+|++..... .....+.+|++++++++||||+++++++.+..
T Consensus 4 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~ 83 (302)
T cd07864 4 RCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALD 83 (302)
T ss_pred hhhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhh
Confidence 45678999999999999999999975 689999999875332 23456788999999999999999999986654
Q ss_pred ------cEEEEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEe
Q 003158 581 ------EQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVA 654 (843)
Q Consensus 581 ------~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~ 654 (843)
..++|+||+++ ++.+.+... ...+++..++.++.|++.||+|||+.+ |+||||||+||++++++.+||+
T Consensus 84 ~~~~~~~~~lv~e~~~~-~l~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~---i~H~dl~p~nili~~~~~~kl~ 158 (302)
T cd07864 84 FKKDKGAFYLVFEYMDH-DLMGLLESG-LVHFSEDHIKSFMKQLLEGLNYCHKKN---FLHRDIKCSNILLNNKGQIKLA 158 (302)
T ss_pred ccccCCcEEEEEcccCc-cHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCcEEeC
Confidence 78999999975 777777543 346899999999999999999999998 9999999999999999999999
Q ss_pred eccccccCCCCCCCCcccceeeeeecccCCccCchhccc-CCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHh
Q 003158 655 DFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAY 733 (843)
Q Consensus 655 DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~ 733 (843)
|||++........ .......++..|+|||.+.+ ..++.++|||||||++|||++|+.||...... .
T Consensus 159 dfg~~~~~~~~~~------~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~-~------ 225 (302)
T cd07864 159 DFGLARLYNSEES------RPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQEL-A------ 225 (302)
T ss_pred cccccccccCCcc------cccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChH-H------
Confidence 9999986543221 11122345778999998865 45788999999999999999999998654321 1
Q ss_pred hcccchhhccCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH---------HHHhhhhCCCCCCCCCccccCCC
Q 003158 734 QSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRE---------LESIWNMMPESDTKTPEFINSEH 804 (843)
Q Consensus 734 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~---------L~~~~~~~~~~~~~~~dll~~~L 804 (843)
.+..+...|....|..+|.+.+.... ...+...+........+++.+|+
T Consensus 226 ----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l 283 (302)
T cd07864 226 ----------------------QLELISRLCGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHML 283 (302)
T ss_pred ----------------------HHHHHHHHhCCCChhhcccccccccccccccccccccchhhhcCCCCHHHHHHHHHHc
Confidence 11222223333333333322221100 00111122223455678999999
Q ss_pred CCCCCCCCCCccCCCCCcc
Q 003158 805 TSKEETPPSSSSMLKHPYV 823 (843)
Q Consensus 805 ~~dp~~R~sa~e~L~Hp~f 823 (843)
..||++|||+++++.||||
T Consensus 284 ~~~P~~Rp~~~~il~~~~~ 302 (302)
T cd07864 284 TLDPSKRCTAEEALNSPWL 302 (302)
T ss_pred cCChhhCCCHHHHhcCCCC
Confidence 9999999999999999997
No 272
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=100.00 E-value=7e-35 Score=313.59 Aligned_cols=202 Identities=26% Similarity=0.409 Sum_probs=174.3
Q ss_pred HcCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCChhhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEEec
Q 003158 510 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 588 (843)
Q Consensus 510 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e~ 588 (843)
.+.|++.+.||+|+||.||+|... +++.||+|.+........+.+.+|+++++.++|+||+++++++..++..++||||
T Consensus 11 ~~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 90 (292)
T cd06644 11 NEVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMIEF 90 (292)
T ss_pred chhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEEec
Confidence 367888999999999999999975 5899999999876666667889999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCCC
Q 003158 589 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 668 (843)
Q Consensus 589 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 668 (843)
+++++|..++.+.. ..+++..++.++.|+++||.|||+.+ ++||||||+||+++.++.+||+|||++......
T Consensus 91 ~~~~~l~~~~~~~~-~~l~~~~~~~~~~ql~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~--- 163 (292)
T cd06644 91 CPGGAVDAIMLELD-RGLTEPQIQVICRQMLEALQYLHSMK---IIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKT--- 163 (292)
T ss_pred CCCCcHHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHhcCC---eeecCCCcceEEEcCCCCEEEccCccceecccc---
Confidence 99999998876533 35889999999999999999999998 999999999999999999999999998653221
Q ss_pred CcccceeeeeecccCCccCchhcc-----cCCCCchhhhHHHHHHHHHHHhCCCCCCCC
Q 003158 669 GIVPAHVSTVVKGTPGYLDPEYFL-----THKLTDKSDVYSLGVVFLELLTGMQPISHG 722 (843)
Q Consensus 669 ~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDvwS~G~~l~elltg~~pf~~~ 722 (843)
........++..|+|||++. ...++.++|||||||++|||++|..||...
T Consensus 164 ----~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~ 218 (292)
T cd06644 164 ----LQRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHEL 218 (292)
T ss_pred ----ccccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccc
Confidence 11123345788999999985 345678999999999999999999998653
No 273
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=100.00 E-value=2.5e-35 Score=313.81 Aligned_cols=238 Identities=24% Similarity=0.370 Sum_probs=188.4
Q ss_pred cccccCCeeEEEEEeCC-------------------------CcEEEEEEeccCChhhHHHHHHHHHHHHhccCCcccce
Q 003158 518 QIGQGGYGKVYKGILPD-------------------------GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSL 572 (843)
Q Consensus 518 ~lg~G~~g~Vy~~~~~~-------------------------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l 572 (843)
.||+|+||.||+|.... ...||+|++.........++.+|+.+++.++||||+++
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~ 81 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV 81 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence 58999999999997421 13589999876544445678899999999999999999
Q ss_pred eeeeecCCcEEEEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCC---
Q 003158 573 VGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKF--- 649 (843)
Q Consensus 573 ~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~--- 649 (843)
++++.+....++||||+++|+|.+++... ...+++..+..++.||++||+|||+++ |+||||||+||++++.+
T Consensus 82 ~~~~~~~~~~~lv~ey~~~g~L~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~---iiH~dlkp~Nill~~~~~~~ 157 (274)
T cd05076 82 HGVCVRGSENIMVEEFVEHGPLDVCLRKE-KGRVPVAWKITVAQQLASALSYLEDKN---LVHGNVCAKNILLARLGLAE 157 (274)
T ss_pred EEEEEeCCceEEEEecCCCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHcCC---ccCCCCCcccEEEeccCccc
Confidence 99999999999999999999999998653 335788889999999999999999998 99999999999998654
Q ss_pred ----cEEEeeccccccCCCCCCCCcccceeeeeecccCCccCchhccc-CCCCchhhhHHHHHHHHHHH-hCCCCCCCCc
Q 003158 650 ----TAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELL-TGMQPISHGK 723 (843)
Q Consensus 650 ----~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwS~G~~l~ell-tg~~pf~~~~ 723 (843)
.+|++|||.+...... ....++..|+|||.+.+ ..++.++|||||||++|||+ +|+.||....
T Consensus 158 ~~~~~~kl~d~g~~~~~~~~-----------~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~ 226 (274)
T cd05076 158 GTSPFIKLSDPGVSFTALSR-----------EERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERT 226 (274)
T ss_pred CccceeeecCCccccccccc-----------cccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccC
Confidence 4899999988643211 12346788999999876 56899999999999999995 6999986543
Q ss_pred chHHHHHHHhhcccchhhccCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 003158 724 NIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMREL 782 (843)
Q Consensus 724 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L 782 (843)
.... ...+. . ....+......+.+++.+||+.+|++||++.++++.|
T Consensus 227 ~~~~--~~~~~---------~-~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~il~~L 273 (274)
T cd05076 227 PSEK--ERFYE---------K-KHRLPEPSCKELATLISQCLTYEPTQRPSFRTILRDL 273 (274)
T ss_pred hHHH--HHHHH---------h-ccCCCCCCChHHHHHHHHHcccChhhCcCHHHHHHhh
Confidence 2111 11100 0 0112222345788999999999999999999998876
No 274
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=100.00 E-value=1.4e-35 Score=314.35 Aligned_cols=206 Identities=30% Similarity=0.410 Sum_probs=176.8
Q ss_pred cCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCC-hhhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEEec
Q 003158 511 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 588 (843)
Q Consensus 511 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e~ 588 (843)
++|++.+.||.|+||+||+|... ++..+|+|++.... ....+.+.+|+++++.++|+||+++++.+...+..++|||+
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~ 80 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPY 80 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEec
Confidence 46888999999999999999954 68899999987533 23457889999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCC-CCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCC
Q 003158 589 MSNGTLRDQLSAKSK-EPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 667 (843)
Q Consensus 589 ~~~gsL~~~l~~~~~-~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~ 667 (843)
+++++|.++++.... ..+++..+..++.|++.||+|||+.+ ++||||||+||++++++.++|+|||++........
T Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~---i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~ 157 (267)
T cd06610 81 LSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNG---QIHRDIKAGNILLGEDGSVKIADFGVSASLADGGD 157 (267)
T ss_pred cCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHhEEEcCCCCEEEcccchHHHhccCcc
Confidence 999999999976433 56889999999999999999999999 99999999999999999999999999876653321
Q ss_pred CCcccceeeeeecccCCccCchhcccC-CCCchhhhHHHHHHHHHHHhCCCCCCCC
Q 003158 668 EGIVPAHVSTVVKGTPGYLDPEYFLTH-KLTDKSDVYSLGVVFLELLTGMQPISHG 722 (843)
Q Consensus 668 ~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwS~G~~l~elltg~~pf~~~ 722 (843)
.. ........|+..|+|||++... .++.++|||||||++|||++|+.||...
T Consensus 158 ~~---~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~ 210 (267)
T cd06610 158 RT---RKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKY 210 (267)
T ss_pred cc---ccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCcccc
Confidence 10 0122344688999999999876 7899999999999999999999999654
No 275
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=100.00 E-value=2.6e-35 Score=315.33 Aligned_cols=278 Identities=26% Similarity=0.397 Sum_probs=205.7
Q ss_pred CCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCCh--hhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEEecC
Q 003158 513 FNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFM 589 (843)
Q Consensus 513 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e~~ 589 (843)
|++.+.||.|++|.||+|... +|+.||+|++..... ...+.+.+|+++++.++|+|++++++++.+.+..++||||+
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~ 80 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFL 80 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEecc
Confidence 567889999999999999964 799999999875432 22357888999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCCCC
Q 003158 590 SNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEG 669 (843)
Q Consensus 590 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~ 669 (843)
+ ++|.+++.......+++..++.++.|+++||+|||+++ ++||||+|+||++++++.++|+|||++.......
T Consensus 81 ~-~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~---~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~--- 153 (283)
T cd07835 81 D-LDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHR---VLHRDLKPQNLLIDREGALKLADFGLARAFGVPV--- 153 (283)
T ss_pred C-cCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeCCCCCHHHEEEcCCCcEEEeecccccccCCCc---
Confidence 4 79999997765556899999999999999999999998 9999999999999999999999999997653221
Q ss_pred cccceeeeeecccCCccCchhcccC-CCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhccCCCCC
Q 003158 670 IVPAHVSTVVKGTPGYLDPEYFLTH-KLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGS 748 (843)
Q Consensus 670 ~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 748 (843)
.......++..|+|||++.+. .++.++||||||+++|||++|+.||........... .... ...
T Consensus 154 ----~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~-~~~~----------~~~ 218 (283)
T cd07835 154 ----RTYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFR-IFRT----------LGT 218 (283)
T ss_pred ----cccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHH-HHHH----------hCC
Confidence 111223467899999988764 578899999999999999999999976544322111 1100 011
Q ss_pred CCHHHHHHHHHHHHHhcccCCCC-CCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCCCCccCCCCCcc
Q 003158 749 YPSECVEKFIKLALKCCQDETDA-RPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYV 823 (843)
Q Consensus 749 ~~~~~~~~l~~l~~~c~~~~p~~-RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~sa~e~L~Hp~f 823 (843)
...........+... ...-+.. .+... ...+.......+++.+|+..||++|||++|++.||||
T Consensus 219 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~----------~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~~~~ 283 (283)
T cd07835 219 PDEDVWPGVTSLPDY-KPTFPKWARQDLS----------KVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQHPYF 283 (283)
T ss_pred CChHHhhhhhhchhh-hhhcccccccchh----------hhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhcCCCC
Confidence 111111111111000 0001111 11111 1122333455689999999999999999999999998
No 276
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=3.1e-35 Score=317.05 Aligned_cols=200 Identities=26% Similarity=0.425 Sum_probs=176.1
Q ss_pred cCCCCCCcccccCCeeEEEEEe-CCCcEEEEEEeccCChhhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEEecC
Q 003158 511 NNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFM 589 (843)
Q Consensus 511 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e~~ 589 (843)
.+|++.+.||+|+||.||+|.. .+++.||+|.+........+.+.+|+.+++.++|+||+++++++..++..++||||+
T Consensus 19 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~ 98 (297)
T cd06656 19 KKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYL 98 (297)
T ss_pred hhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEeeccc
Confidence 6788999999999999999995 579999999997655555677889999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCCCC
Q 003158 590 SNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEG 669 (843)
Q Consensus 590 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~ 669 (843)
++++|.+++.+. .+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||++.......
T Consensus 99 ~~~~L~~~~~~~---~~~~~~~~~~~~~l~~~L~~LH~~~---i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~--- 169 (297)
T cd06656 99 AGGSLTDVVTET---CMDEGQIAAVCRECLQALDFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ--- 169 (297)
T ss_pred CCCCHHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEECcCccceEccCCc---
Confidence 999999998543 4788899999999999999999998 9999999999999999999999999987543221
Q ss_pred cccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCc
Q 003158 670 IVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 723 (843)
Q Consensus 670 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~ 723 (843)
.......+++.|+|||.+.+..++.++|||||||++|+|++|+.||....
T Consensus 170 ----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~ 219 (297)
T cd06656 170 ----SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNEN 219 (297)
T ss_pred ----cCcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 11123457889999999999889999999999999999999999996543
No 277
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=100.00 E-value=6.8e-35 Score=307.04 Aligned_cols=200 Identities=31% Similarity=0.475 Sum_probs=176.0
Q ss_pred HcCCCCCCcccccCCeeEEEEEeCC-CcEEEEEEeccCChhhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEEec
Q 003158 510 TNNFNSSTQIGQGGYGKVYKGILPD-GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 588 (843)
Q Consensus 510 ~~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e~ 588 (843)
.++|+..+.||+|+||.||+|...+ ++.||+|.+..... .+++.+|+++++.++|+||+++++++.+....++++||
T Consensus 2 ~~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~ 79 (256)
T cd06612 2 EEVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED--LQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVMEY 79 (256)
T ss_pred cccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH--HHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEec
Confidence 3678899999999999999999764 89999999875322 67899999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCCC
Q 003158 589 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 668 (843)
Q Consensus 589 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 668 (843)
+++++|.+++... ...+++..++.++.|+++||.|||+.+ ++||||+|+||++++++.+||+|||++.......
T Consensus 80 ~~~~~L~~~l~~~-~~~l~~~~~~~~~~~l~~~l~~lh~~~---i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~-- 153 (256)
T cd06612 80 CGAGSVSDIMKIT-NKTLTEEEIAAILYQTLKGLEYLHSNK---KIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTM-- 153 (256)
T ss_pred CCCCcHHHHHHhC-ccCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCcceEEECCCCcEEEcccccchhcccCc--
Confidence 9999999998653 346899999999999999999999998 9999999999999999999999999998654321
Q ss_pred CcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCC
Q 003158 669 GIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 722 (843)
Q Consensus 669 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~ 722 (843)
.......++..|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 154 -----~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~ 202 (256)
T cd06612 154 -----AKRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDI 202 (256)
T ss_pred -----cccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCc
Confidence 1122344788999999999999999999999999999999999999754
No 278
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1e-36 Score=346.50 Aligned_cols=280 Identities=24% Similarity=0.305 Sum_probs=219.6
Q ss_pred HHHHHHHHcCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCCh---hhHHHHHHHHHHHHhccCCcccceeeeeec
Q 003158 503 YGEMALATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDE 578 (843)
Q Consensus 503 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~ 578 (843)
..++....++|+++++||+|+||.|..++.+ .+++||.|++++... ....-|..|-.+|..-..+=|+.++-.|.+
T Consensus 67 v~~lrl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD 146 (1317)
T KOG0612|consen 67 VKELRLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQD 146 (1317)
T ss_pred HHHHhCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcC
Confidence 3466667789999999999999999999965 689999999986322 223467888889999899999999999999
Q ss_pred CCcEEEEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccc
Q 003158 579 EGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGL 658 (843)
Q Consensus 579 ~~~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGl 658 (843)
+.++|+|||||+||+|-.++.+.. ++++..++.++..|.-||.-+|+.| +|||||||+|||+|..|++||+|||.
T Consensus 147 ~~~LYlVMdY~pGGDlltLlSk~~--~~pE~~ArFY~aEiVlAldslH~mg---yVHRDiKPDNvLld~~GHikLADFGs 221 (1317)
T KOG0612|consen 147 ERYLYLVMDYMPGGDLLTLLSKFD--RLPEDWARFYTAEIVLALDSLHSMG---YVHRDIKPDNVLLDKSGHIKLADFGS 221 (1317)
T ss_pred ccceEEEEecccCchHHHHHhhcC--CChHHHHHHHHHHHHHHHHHHHhcc---ceeccCCcceeEecccCcEeeccchh
Confidence 999999999999999999997655 6889999999999999999999999 99999999999999999999999999
Q ss_pred cccCCCCCCCCcccceeeeeecccCCccCchhccc-----CCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHh
Q 003158 659 SRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT-----HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAY 733 (843)
Q Consensus 659 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~ 733 (843)
+-.+.... .-.+...+|||-|++||++.. +.|+..+|+||+||++|||+.|..||.... +......+.
T Consensus 222 Clkm~~dG------~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYads-lveTY~KIm 294 (1317)
T KOG0612|consen 222 CLKMDADG------TVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADS-LVETYGKIM 294 (1317)
T ss_pred HHhcCCCC------cEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHH-HHHHHHHHh
Confidence 87665322 234456789999999999963 568999999999999999999999997433 221111111
Q ss_pred hcccchhhccCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCCC
Q 003158 734 QSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPS 813 (843)
Q Consensus 734 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~s 813 (843)
... ....+|+ . .+.+..+.|||.++++ +|+.|..
T Consensus 295 ~hk--------~~l~FP~--------------------------~-----------~~VSeeakdLI~~ll~-~~e~RLg 328 (1317)
T KOG0612|consen 295 NHK--------ESLSFPD--------------------------E-----------TDVSEEAKDLIEALLC-DREVRLG 328 (1317)
T ss_pred chh--------hhcCCCc--------------------------c-----------cccCHHHHHHHHHHhc-Chhhhcc
Confidence 000 0011110 0 1123334456666544 5778888
Q ss_pred ---CccCCCCCcccCCCCCCccccccCCCCCC
Q 003158 814 ---SSSMLKHPYVSSDVSGSNLVSGVIPTITP 842 (843)
Q Consensus 814 ---a~e~L~Hp~f~~~~~~~~~~~~~~~~~~~ 842 (843)
.+++-.||||.++.| +-+++-.||+.|
T Consensus 329 rngiedik~HpFF~g~~W--~~iR~~~pP~vP 358 (1317)
T KOG0612|consen 329 RNGIEDIKNHPFFEGIDW--DNIRESVPPVVP 358 (1317)
T ss_pred cccHHHHHhCccccCCCh--hhhhhcCCCCCC
Confidence 999999999999999 556665566655
No 279
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=100.00 E-value=4.3e-35 Score=313.16 Aligned_cols=202 Identities=29% Similarity=0.392 Sum_probs=175.5
Q ss_pred HcCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCChhhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEEec
Q 003158 510 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 588 (843)
Q Consensus 510 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e~ 588 (843)
.++|++.+.||+|+||.||+|... ++..||+|.+........+.+.+|++++++++|+||+++++++......++||||
T Consensus 4 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 83 (280)
T cd06611 4 NDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIEF 83 (280)
T ss_pred hhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEeec
Confidence 356888999999999999999964 6899999999866656667899999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCCC
Q 003158 589 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 668 (843)
Q Consensus 589 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 668 (843)
+++++|.+++.... ..+++..++.++.|++.||.|||+.+ |+|+||||+||+++.++.++|+|||++.......
T Consensus 84 ~~~~~L~~~~~~~~-~~l~~~~~~~~~~ql~~~l~~lh~~~---i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~-- 157 (280)
T cd06611 84 CDGGALDSIMLELE-RGLTEPQIRYVCRQMLEALNFLHSHK---VIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTL-- 157 (280)
T ss_pred cCCCcHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCChhhEEECCCCCEEEccCccchhhcccc--
Confidence 99999999986543 35899999999999999999999999 9999999999999999999999999987543211
Q ss_pred CcccceeeeeecccCCccCchhcc-----cCCCCchhhhHHHHHHHHHHHhCCCCCCCC
Q 003158 669 GIVPAHVSTVVKGTPGYLDPEYFL-----THKLTDKSDVYSLGVVFLELLTGMQPISHG 722 (843)
Q Consensus 669 ~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDvwS~G~~l~elltg~~pf~~~ 722 (843)
.......+++.|+|||.+. ...++.++|||||||++|||++|+.||...
T Consensus 158 -----~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~ 211 (280)
T cd06611 158 -----QKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHEL 211 (280)
T ss_pred -----cccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccC
Confidence 1123346889999999985 345678999999999999999999999654
No 280
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=100.00 E-value=3.7e-35 Score=309.09 Aligned_cols=201 Identities=26% Similarity=0.412 Sum_probs=174.3
Q ss_pred CCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCC--hhhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEEec
Q 003158 512 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 588 (843)
Q Consensus 512 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e~ 588 (843)
+|+..+.||+|+||.||+|... +++.+|+|.+.... ....+.+.+|+++++.++||||+++++.+..++..++||||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEY 80 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEec
Confidence 5788899999999999999964 68899999987543 23356788999999999999999999999989999999999
Q ss_pred CCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCC-CcEEEeeccccccCCCCCC
Q 003158 589 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHK-FTAKVADFGLSRLAPVPDI 667 (843)
Q Consensus 589 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~-~~~kl~DfGla~~~~~~~~ 667 (843)
+++++|.+++.......+++..++.++.|+++||+|||+++ ++||||||+||+++++ +.+||+|||.+.......
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~---i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~- 156 (256)
T cd08220 81 APGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKL---ILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKS- 156 (256)
T ss_pred CCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEEccCCCceecCCCc-
Confidence 99999999998766667899999999999999999999998 9999999999999855 468999999998654321
Q ss_pred CCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCc
Q 003158 668 EGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 723 (843)
Q Consensus 668 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~ 723 (843)
......++..|+|||.+.+..++.++||||||+++|+|++|+.||....
T Consensus 157 -------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~ 205 (256)
T cd08220 157 -------KAYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAAN 205 (256)
T ss_pred -------cccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCc
Confidence 1123457889999999998889999999999999999999999986543
No 281
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=2.7e-35 Score=312.40 Aligned_cols=201 Identities=27% Similarity=0.409 Sum_probs=173.2
Q ss_pred HcCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCChhhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEEec
Q 003158 510 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 588 (843)
Q Consensus 510 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e~ 588 (843)
.++|++.+.||+|+||.||+|... +++.||+|.++.........+.+|+.+++.++||||+++++++...+..++||||
T Consensus 8 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e~ 87 (267)
T cd06645 8 QEDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICMEF 87 (267)
T ss_pred HHHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEec
Confidence 346777889999999999999964 6899999998765444455688899999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCCC
Q 003158 589 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 668 (843)
Q Consensus 589 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 668 (843)
+++++|.+++...+ .+++..++.++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||++.......
T Consensus 88 ~~~~~L~~~~~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~-- 160 (267)
T cd06645 88 CGGGSLQDIYHVTG--PLSESQIAYVSRETLQGLYYLHSKG---KMHRDIKGANILLTDNGHVKLADFGVSAQITATI-- 160 (267)
T ss_pred cCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEECcceeeeEccCcc--
Confidence 99999999986543 5889999999999999999999999 9999999999999999999999999987553211
Q ss_pred CcccceeeeeecccCCccCchhcc---cCCCCchhhhHHHHHHHHHHHhCCCCCCCC
Q 003158 669 GIVPAHVSTVVKGTPGYLDPEYFL---THKLTDKSDVYSLGVVFLELLTGMQPISHG 722 (843)
Q Consensus 669 ~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDvwS~G~~l~elltg~~pf~~~ 722 (843)
.......|+..|+|||++. ...++.++|||||||++|||++|..||...
T Consensus 161 -----~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~ 212 (267)
T cd06645 161 -----AKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDL 212 (267)
T ss_pred -----cccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccc
Confidence 1123346889999999985 456888999999999999999999998654
No 282
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=100.00 E-value=9.1e-35 Score=308.72 Aligned_cols=251 Identities=25% Similarity=0.349 Sum_probs=190.8
Q ss_pred cccccCCeeEEEEEeCC---CcEEEEEEeccCCh-hhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEEecCCCCC
Q 003158 518 QIGQGGYGKVYKGILPD---GTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGT 593 (843)
Q Consensus 518 ~lg~G~~g~Vy~~~~~~---~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e~~~~gs 593 (843)
.||+|+||+||+|...+ ...+|+|.+..... .....+.+|+++++.++|+||+++++++......++||||+++|+
T Consensus 2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~g~ 81 (269)
T cd05042 2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLGD 81 (269)
T ss_pred cCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCCCc
Confidence 58999999999997543 45788998764332 334578899999999999999999999999999999999999999
Q ss_pred HHHHHhhcCC---CCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCCCCc
Q 003158 594 LRDQLSAKSK---EPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGI 670 (843)
Q Consensus 594 L~~~l~~~~~---~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~ 670 (843)
|.+++..... ...++.....++.||+.||+|||+++ |+||||||+||++++++.+||+|||++........
T Consensus 82 L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~--- 155 (269)
T cd05042 82 LKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQAD---FIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDY--- 155 (269)
T ss_pred HHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcC---EecccccHhheEecCCCcEEEeccccccccccchh---
Confidence 9999976432 23467778899999999999999998 99999999999999999999999999865432210
Q ss_pred ccceeeeeecccCCccCchhccc-------CCCCchhhhHHHHHHHHHHHh-CCCCCCCCcchHHHHHHHhhcccchhhc
Q 003158 671 VPAHVSTVVKGTPGYLDPEYFLT-------HKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVI 742 (843)
Q Consensus 671 ~~~~~~~~~~gt~~y~aPE~~~~-------~~~~~~sDvwS~G~~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 742 (843)
........++..|+|||++.. ..++.++|||||||++|||++ |..||....+.. ......... ..
T Consensus 156 --~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~-~~~~~~~~~----~~ 228 (269)
T cd05042 156 --YITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQ-VLKQVVREQ----DI 228 (269)
T ss_pred --eeccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHH-HHHHHhhcc----Cc
Confidence 001122345678999999753 356789999999999999999 778886544322 111111110 00
Q ss_pred cCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 003158 743 DGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMREL 782 (843)
Q Consensus 743 ~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L 782 (843)
....+..+..++..+.+++..|| .+|++||++++|++.+
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l 267 (269)
T cd05042 229 KLPKPQLDLKYSDRWYEVMQFCW-LDPETRPTAEEVHELL 267 (269)
T ss_pred cCCCCcccccCCHHHHHHHHHHh-cCcccccCHHHHHHHh
Confidence 11112234456677888999999 5999999999998875
No 283
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=100.00 E-value=3e-35 Score=313.93 Aligned_cols=247 Identities=27% Similarity=0.413 Sum_probs=198.5
Q ss_pred CCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCC-hhhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEEecC
Q 003158 512 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFM 589 (843)
Q Consensus 512 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e~~ 589 (843)
.|+..+.||+|+||.||+|... +++.||+|.+.... ....+.+.+|++++++++||||+++++++......++||||+
T Consensus 5 ~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (277)
T cd06642 5 LFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEYL 84 (277)
T ss_pred HHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEcc
Confidence 4666788999999999999864 58899999987443 333567899999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCCCC
Q 003158 590 SNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEG 669 (843)
Q Consensus 590 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~ 669 (843)
++++|.+++.. ..+++..++.++.|+++|+.|||+++ ++|+||+|+||++++++.++++|||++.......
T Consensus 85 ~~~~L~~~~~~---~~~~~~~~~~~~~~i~~~l~~lH~~~---ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~--- 155 (277)
T cd06642 85 GGGSALDLLKP---GPLEETYIATILREILKGLDYLHSER---KIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ--- 155 (277)
T ss_pred CCCcHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHhcCC---eeccCCChheEEEeCCCCEEEccccccccccCcc---
Confidence 99999999854 35788999999999999999999998 9999999999999999999999999987654221
Q ss_pred cccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhccCCCCCC
Q 003158 670 IVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSY 749 (843)
Q Consensus 670 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 749 (843)
.......++..|+|||++.+..++.++|||||||++|||++|+.||....... .. ..+........
T Consensus 156 ----~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~-~~---------~~~~~~~~~~~ 221 (277)
T cd06642 156 ----IKRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMR-VL---------FLIPKNSPPTL 221 (277)
T ss_pred ----hhhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhh-HH---------hhhhcCCCCCC
Confidence 11122457889999999999899999999999999999999999986433211 00 01111122233
Q ss_pred CHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 003158 750 PSECVEKFIKLALKCCQDETDARPSMSEVMRE 781 (843)
Q Consensus 750 ~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~ 781 (843)
+..++..+.+++.+||+.+|++||++.++++.
T Consensus 222 ~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06642 222 EGQYSKPFKEFVEACLNKDPRFRPTAKELLKH 253 (277)
T ss_pred CcccCHHHHHHHHHHccCCcccCcCHHHHHHh
Confidence 44556677788888888888888888888763
No 284
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=2.1e-35 Score=347.37 Aligned_cols=259 Identities=22% Similarity=0.338 Sum_probs=203.3
Q ss_pred HHHHHHHcCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCC--hhhHHHHHHHHHHHHhccCCcccceeeeeec--
Q 003158 504 GEMALATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDE-- 578 (843)
Q Consensus 504 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~-- 578 (843)
.+.....++|.+.+.||+|+||+||+|... ++..||+|.+.... ......+..|+.+++.++||||++++++|.+
T Consensus 6 ~~ge~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~ 85 (1021)
T PTZ00266 6 DDGESRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKA 85 (1021)
T ss_pred cCCccccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecC
Confidence 344455678999999999999999999965 57899999887432 2335678999999999999999999998854
Q ss_pred CCcEEEEEecCCCCCHHHHHhhc--CCCCcchhHHHHHHHHHHHHHHHHhcCCC----CCEEeccCCCCcEEEcC-----
Q 003158 579 EGEQMLVYEFMSNGTLRDQLSAK--SKEPLGFAMRLSIALGSSRGILYLHTEAD----PPVFHRDIKASNILLDH----- 647 (843)
Q Consensus 579 ~~~~~lV~e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~ia~aL~yLH~~~~----~~iiH~Dlkp~NILl~~----- 647 (843)
....+|||||+++|+|.++|... ....+++..++.|+.||+.||.|||+.+. .+||||||||+|||++.
T Consensus 86 ~~~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~l 165 (1021)
T PTZ00266 86 NQKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHI 165 (1021)
T ss_pred CCEEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCcccc
Confidence 35689999999999999999753 23468999999999999999999998542 34999999999999964
Q ss_pred ------------CCcEEEeeccccccCCCCCCCCcccceeeeeecccCCccCchhccc--CCCCchhhhHHHHHHHHHHH
Q 003158 648 ------------KFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT--HKLTDKSDVYSLGVVFLELL 713 (843)
Q Consensus 648 ------------~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~sDvwS~G~~l~ell 713 (843)
.+.+||+|||++....... ......||+.|+|||++.+ ..++.++|||||||++|||+
T Consensus 166 g~i~~~~~n~ng~~iVKLsDFGlAr~l~~~s--------~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELL 237 (1021)
T PTZ00266 166 GKITAQANNLNGRPIAKIGDFGLSKNIGIES--------MAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELC 237 (1021)
T ss_pred ccccccccccCCCCceEEccCCccccccccc--------cccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHH
Confidence 3359999999997653221 1234468999999999864 45889999999999999999
Q ss_pred hCCCCCCCCcchHHHHHHHhhcccchhhccCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 003158 714 TGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMR 780 (843)
Q Consensus 714 tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~ 780 (843)
+|+.||............. ...........+.++.+++..||..+|.+||++.+++.
T Consensus 238 TGk~PF~~~~~~~qli~~l----------k~~p~lpi~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~ 294 (1021)
T PTZ00266 238 SGKTPFHKANNFSQLISEL----------KRGPDLPIKGKSKELNILIKNLLNLSAKERPSALQCLG 294 (1021)
T ss_pred HCCCCCCcCCcHHHHHHHH----------hcCCCCCcCCCCHHHHHHHHHHhcCChhHCcCHHHHhc
Confidence 9999997655433322211 11111111234577889999999999999999999984
No 285
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=100.00 E-value=1.1e-35 Score=313.60 Aligned_cols=239 Identities=23% Similarity=0.408 Sum_probs=191.8
Q ss_pred CcccccCCeeEEEEEeCC--------CcEEEEEEeccCChhhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEEec
Q 003158 517 TQIGQGGYGKVYKGILPD--------GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 588 (843)
Q Consensus 517 ~~lg~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e~ 588 (843)
+.||+|+||.||+|.... ...||+|.+........+.+.+|+.+++.++||||+++++++..++..++||||
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~ 80 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEY 80 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEec
Confidence 469999999999998632 234888888755445556788999999999999999999999998999999999
Q ss_pred CCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCc--------EEEeeccccc
Q 003158 589 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFT--------AKVADFGLSR 660 (843)
Q Consensus 589 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~--------~kl~DfGla~ 660 (843)
+++|+|.++++.... .+++..++.++.||+.||+|||+.+ |+||||||+||+++.++. ++++|||.+.
T Consensus 81 ~~~g~L~~~l~~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~---iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~ 156 (258)
T cd05078 81 VKFGSLDTYLKKNKN-LINISWKLEVAKQLAWALHFLEDKG---LTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISI 156 (258)
T ss_pred CCCCcHHHHHhcCCC-CCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCccceEEEecccccccCCCceEEeccccccc
Confidence 999999999976433 5788999999999999999999999 999999999999987765 6999999886
Q ss_pred cCCCCCCCCcccceeeeeecccCCccCchhccc-CCCCchhhhHHHHHHHHHHHhCC-CCCCCCcchHHHHHHHhhcccc
Q 003158 661 LAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGM-QPISHGKNIVREVNIAYQSSMM 738 (843)
Q Consensus 661 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwS~G~~l~elltg~-~pf~~~~~~~~~~~~~~~~~~~ 738 (843)
.... .....++..|+|||++.+ ..++.++|||||||++|||++|. .|+..... ......
T Consensus 157 ~~~~-----------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~-~~~~~~------- 217 (258)
T cd05078 157 TVLP-----------KEILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDS-QKKLQF------- 217 (258)
T ss_pred ccCC-----------chhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccH-HHHHHH-------
Confidence 5431 122457889999999987 45789999999999999999985 45543222 111110
Q ss_pred hhhccCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 003158 739 FSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMREL 782 (843)
Q Consensus 739 ~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L 782 (843)
. ......|...+.++.+++.+||+.+|++||+++++++.|
T Consensus 218 ---~-~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l 257 (258)
T cd05078 218 ---Y-EDRHQLPAPKWTELANLINQCMDYEPDFRPSFRAIIRDL 257 (258)
T ss_pred ---H-HccccCCCCCcHHHHHHHHHHhccChhhCCCHHHHHHhc
Confidence 0 111233444557889999999999999999999999876
No 286
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=100.00 E-value=3.7e-35 Score=313.41 Aligned_cols=190 Identities=27% Similarity=0.392 Sum_probs=158.2
Q ss_pred cccccCCeeEEEEEeC-CCcEEEEEEeccCChh---hHHHHHHHHHHHH---hccCCcccceeeeeecCCcEEEEEecCC
Q 003158 518 QIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ---GEKEFLTEIQFLS---RLHHRNLVSLVGYCDEEGEQMLVYEFMS 590 (843)
Q Consensus 518 ~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~E~~~l~---~l~h~nIv~l~~~~~~~~~~~lV~e~~~ 590 (843)
.||+|+||.||++... +++.||+|.+...... ....+.+|..+++ ..+|+||+.+++++..++..++||||++
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 80 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN 80 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence 4899999999999964 6899999988653221 2233445544443 3479999999999999999999999999
Q ss_pred CCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCCCCc
Q 003158 591 NGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGI 670 (843)
Q Consensus 591 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~ 670 (843)
+|+|.+++..+. .+++..+..++.|++.||+|||+.+ |+||||||+||++++++.++|+|||++.......
T Consensus 81 ~~~L~~~i~~~~--~l~~~~~~~i~~qi~~al~~lH~~~---ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~~---- 151 (279)
T cd05633 81 GGDLHYHLSQHG--VFSEKEMRFYATEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKK---- 151 (279)
T ss_pred CCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC---cCCCCCCHHHEEECCCCCEEEccCCcceeccccC----
Confidence 999999986543 5899999999999999999999999 9999999999999999999999999987543211
Q ss_pred ccceeeeeecccCCccCchhccc-CCCCchhhhHHHHHHHHHHHhCCCCCCC
Q 003158 671 VPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISH 721 (843)
Q Consensus 671 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwS~G~~l~elltg~~pf~~ 721 (843)
.....|+..|+|||.+.+ ..++.++||||+||++|||++|+.||..
T Consensus 152 -----~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~ 198 (279)
T cd05633 152 -----PHASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQ 198 (279)
T ss_pred -----ccCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCC
Confidence 122358999999999874 5688999999999999999999999964
No 287
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=100.00 E-value=9.8e-35 Score=306.97 Aligned_cols=202 Identities=28% Similarity=0.421 Sum_probs=176.8
Q ss_pred cCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCChhhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEEecC
Q 003158 511 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFM 589 (843)
Q Consensus 511 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e~~ 589 (843)
++|+..+.||+|+||.||+|... +++.+|+|.+........+.+.+|+++++.++||||+++++++.+.+..+++|||+
T Consensus 3 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e~~ 82 (262)
T cd06613 3 EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVMEYC 82 (262)
T ss_pred cceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEeCC
Confidence 57888999999999999999964 57899999998655555678899999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCCCC
Q 003158 590 SNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEG 669 (843)
Q Consensus 590 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~ 669 (843)
++++|.+++... ...+++..+..++.|++.||.|||+.+ |+|+||||+||++++++.+||+|||.+.......
T Consensus 83 ~~~~l~~~~~~~-~~~l~~~~~~~~~~ql~~~l~~lh~~~---i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~--- 155 (262)
T cd06613 83 GGGSLQDIYQVT-RGPLSELQIAYVCRETLKGLAYLHETG---KIHRDIKGANILLTEDGDVKLADFGVSAQLTATI--- 155 (262)
T ss_pred CCCcHHHHHHhh-ccCCCHHHHHHHHHHHHHHHHHHHhCC---ceecCCChhhEEECCCCCEEECccccchhhhhhh---
Confidence 999999998664 245889999999999999999999998 9999999999999999999999999987653211
Q ss_pred cccceeeeeecccCCccCchhcccC---CCCchhhhHHHHHHHHHHHhCCCCCCCCc
Q 003158 670 IVPAHVSTVVKGTPGYLDPEYFLTH---KLTDKSDVYSLGVVFLELLTGMQPISHGK 723 (843)
Q Consensus 670 ~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~sDvwS~G~~l~elltg~~pf~~~~ 723 (843)
.......++..|+|||.+.+. .++.++|||||||++|||++|+.||....
T Consensus 156 ----~~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~ 208 (262)
T cd06613 156 ----AKRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLH 208 (262)
T ss_pred ----hccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCC
Confidence 112334578899999999876 88999999999999999999999997644
No 288
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=100.00 E-value=1.4e-35 Score=317.84 Aligned_cols=280 Identities=25% Similarity=0.369 Sum_probs=205.2
Q ss_pred CCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCC--hhhHHHHHHHHHHHHhccCCcccceeeeeecC--CcEEEEEe
Q 003158 513 FNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE--GEQMLVYE 587 (843)
Q Consensus 513 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~--~~~~lV~e 587 (843)
|++.+.||+|+||.||+|... +++.+|+|++.... ....+.+.+|+++++.++|+|++++++++.+. +..++|||
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e 80 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFE 80 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEec
Confidence 567889999999999999975 58999999998653 23345788999999999999999999999887 89999999
Q ss_pred cCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCC
Q 003158 588 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 667 (843)
Q Consensus 588 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~ 667 (843)
|++ ++|.+++.... ..+++..++.++.|+++||+|||+.+ ++|+||||+||++++++.+||+|||++........
T Consensus 81 ~~~-~~l~~~~~~~~-~~~~~~~~~~i~~~i~~al~~LH~~~---~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~~ 155 (287)
T cd07840 81 YMD-HDLTGLLDSPE-VKFTESQIKCYMKQLLEGLQYLHSNG---ILHRDIKGSNILINNDGVLKLADFGLARPYTKRNS 155 (287)
T ss_pred ccc-ccHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCcHHHeEEcCCCCEEEccccceeeccCCCc
Confidence 996 58998886542 46899999999999999999999998 99999999999999999999999999986643321
Q ss_pred CCcccceeeeeecccCCccCchhccc-CCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhccCCC
Q 003158 668 EGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNM 746 (843)
Q Consensus 668 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 746 (843)
.......++..|+|||.+.+ ..++.++||||||+++|||++|+.||..... ......... . .
T Consensus 156 ------~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~-~~~~~~~~~------~----~ 218 (287)
T cd07840 156 ------ADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTE-LEQLEKIFE------L----C 218 (287)
T ss_pred ------ccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCCh-HHHHHHHHH------H----h
Confidence 11223356788999998765 4578999999999999999999999976543 221111110 0 0
Q ss_pred CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCC-CCCCCCccccCCCCCCCCCCCCCccCCCCCcc
Q 003158 747 GSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPE-SDTKTPEFINSEHTSKEETPPSSSSMLKHPYV 823 (843)
Q Consensus 747 ~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~-~~~~~~dll~~~L~~dp~~R~sa~e~L~Hp~f 823 (843)
...+......+.++ +.......++.....+ ... +.. ......+++++|+..+|++||++++++.||||
T Consensus 219 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~---~~~---~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~~~~ 287 (287)
T cd07840 219 GSPTDENWPGVSKL---PWFENLKPKKPYKRRL---REF---FKHLIDPSALDLLDKLLTLDPKKRISADQALQHEYF 287 (287)
T ss_pred CCCchhhccccccc---hhhhhccccccchhHH---HHH---hcccCCHHHHHHHHHHcCCChhhCcCHHHHhhCcCC
Confidence 00111111111111 1111111111111111 111 111 24456789999999999999999999999997
No 289
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=100.00 E-value=5.4e-37 Score=321.48 Aligned_cols=252 Identities=26% Similarity=0.421 Sum_probs=211.4
Q ss_pred CCcccccCCeeEEEEEe-CCCcEEEEEEeccCCh--hhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEEecCCCC
Q 003158 516 STQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNG 592 (843)
Q Consensus 516 ~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e~~~~g 592 (843)
.+.||+|.||+||-|+. ++|+.||||++.+... ..+.++.+|+.+|+.++||.||.+...|+..+..++|||-+ +|
T Consensus 569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl-~G 647 (888)
T KOG4236|consen 569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKL-HG 647 (888)
T ss_pred HhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhh-cc
Confidence 47899999999999996 4799999999986433 34578899999999999999999999999999999999999 56
Q ss_pred CHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCC---CcEEEeeccccccCCCCCCCC
Q 003158 593 TLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHK---FTAKVADFGLSRLAPVPDIEG 669 (843)
Q Consensus 593 sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~---~~~kl~DfGla~~~~~~~~~~ 669 (843)
+..+++-......+++...+.++.||+.||.|||.++ |+|+||||+|||+.+. -++||+|||.|++...
T Consensus 648 DMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~kn---IvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgE----- 719 (888)
T KOG4236|consen 648 DMLEMILSSEKGRLPERITKFLVTQILVALRYLHFKN---IVHCDLKPENVLLASASPFPQVKLCDFGFARIIGE----- 719 (888)
T ss_pred hHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhcc---eeeccCCchheeeccCCCCCceeeccccceeecch-----
Confidence 7777776666677999999999999999999999999 9999999999999654 3799999999998764
Q ss_pred cccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhccCCCCCC
Q 003158 670 IVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSY 749 (843)
Q Consensus 670 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 749 (843)
......+.||+.|+|||+++...|...-|+||+||++|--++|..||..+.+..++.+.+. .+ +
T Consensus 720 ---ksFRrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEdEdIndQIQNAa---FM----------y 783 (888)
T KOG4236|consen 720 ---KSFRRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDEDINDQIQNAA---FM----------Y 783 (888)
T ss_pred ---hhhhhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCccchhHHhhccc---cc----------c
Confidence 3345678899999999999999999999999999999999999999987776655543210 00 1
Q ss_pred CHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCCCCccCCCCCcccCCC
Q 003158 750 PSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSSDV 827 (843)
Q Consensus 750 ~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~sa~e~L~Hp~f~~~~ 827 (843)
|. +| |.+.+..+.|||+.+|+..=++|.|.+..|.|||+++-.
T Consensus 784 Pp----------------~P-------------------W~eis~~AidlIn~LLqVkm~kRysvdk~lsh~Wlq~yq 826 (888)
T KOG4236|consen 784 PP----------------NP-------------------WSEISPEAIDLINNLLQVKMRKRYSVDKSLSHPWLQDYQ 826 (888)
T ss_pred CC----------------Cc-------------------hhhcCHHHHHHHHHHHHHHHHHhcchHhhccchhhhcch
Confidence 11 11 223345566899999999999999999999999997644
No 290
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=3.3e-35 Score=314.77 Aligned_cols=199 Identities=31% Similarity=0.454 Sum_probs=173.2
Q ss_pred HcCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCC-hhhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEEe
Q 003158 510 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 587 (843)
Q Consensus 510 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e 587 (843)
.++|++.+.||+|+||+||+|... +++.||+|++.... ....+++.+|+++++.++||||+++++++......++|||
T Consensus 4 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 83 (284)
T cd06620 4 NEDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCME 83 (284)
T ss_pred HHHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEEe
Confidence 356788899999999999999964 68999999886543 3345788999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhc-CCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCC
Q 003158 588 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHT-EADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 666 (843)
Q Consensus 588 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~-~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~ 666 (843)
|+++++|.+++... .++++..+..++.+++.||.|||+ .+ ++||||||+||++++++.++|+|||++......
T Consensus 84 ~~~~~~L~~~~~~~--~~~~~~~~~~~~~~i~~~l~~LH~~~~---i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~- 157 (284)
T cd06620 84 FMDCGSLDRIYKKG--GPIPVEILGKIAVAVVEGLTYLYNVHR---IMHRDIKPSNILVNSRGQIKLCDFGVSGELINS- 157 (284)
T ss_pred cCCCCCHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHHhcC---eeccCCCHHHEEECCCCcEEEccCCcccchhhh-
Confidence 99999999998664 358899999999999999999997 46 999999999999999999999999998654211
Q ss_pred CCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCC
Q 003158 667 IEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 722 (843)
Q Consensus 667 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~ 722 (843)
......|+..|+|||++.+..++.++|||||||++||+++|+.||...
T Consensus 158 --------~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~ 205 (284)
T cd06620 158 --------IADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFS 205 (284)
T ss_pred --------ccCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCccc
Confidence 112346889999999998889999999999999999999999999754
No 291
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=100.00 E-value=7.1e-35 Score=310.56 Aligned_cols=254 Identities=27% Similarity=0.422 Sum_probs=204.9
Q ss_pred cCCCCCCcccccCCeeEEEEEeC------CCcEEEEEEeccCChh-hHHHHHHHHHHHHhccCCcccceeeeeecCCcEE
Q 003158 511 NNFNSSTQIGQGGYGKVYKGILP------DGTVVAVKRAQEGSLQ-GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQM 583 (843)
Q Consensus 511 ~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~ 583 (843)
++|++...||+|+||+||+|+.+ +.+.||+|.+...... ..+++.+|++++++++|+||+++++++.+.+..+
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 84 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPHY 84 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcce
Confidence 57888999999999999999963 2467999988754433 3567999999999999999999999999999999
Q ss_pred EEEecCCCCCHHHHHhhcCC-------CCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeec
Q 003158 584 LVYEFMSNGTLRDQLSAKSK-------EPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADF 656 (843)
Q Consensus 584 lV~e~~~~gsL~~~l~~~~~-------~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~Df 656 (843)
+||||+++|+|.+++..... ..+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.++++||
T Consensus 85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~---i~H~dlkp~Nili~~~~~~~l~~~ 161 (275)
T cd05046 85 MILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNAR---FVHRDLAARNCLVSSQREVKVSLL 161 (275)
T ss_pred EEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcC---cccCcCccceEEEeCCCcEEEccc
Confidence 99999999999999976441 25899999999999999999999999 999999999999999999999999
Q ss_pred cccccCCCCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHh-CCCCCCCCcchHHHHHHHhhc
Q 003158 657 GLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQS 735 (843)
Q Consensus 657 Gla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~ellt-g~~pf~~~~~~~~~~~~~~~~ 735 (843)
|++........ .......++..|+|||.+.+..++.++||||||+++|||++ |..||...... ..+...
T Consensus 162 ~~~~~~~~~~~------~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~-~~~~~~--- 231 (275)
T cd05046 162 SLSKDVYNSEY------YKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDE-EVLNRL--- 231 (275)
T ss_pred ccccccCcccc------cccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccchH-HHHHHH---
Confidence 99875432211 11122345677999999998888999999999999999999 78888643321 111111
Q ss_pred ccchhhccCCC-CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 003158 736 SMMFSVIDGNM-GSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELE 783 (843)
Q Consensus 736 ~~~~~~~~~~~-~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~ 783 (843)
..+.. ...+..++..+.+++.+||+.+|.+||++.++++.|.
T Consensus 232 ------~~~~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~ 274 (275)
T cd05046 232 ------QAGKLELPVPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSALG 274 (275)
T ss_pred ------HcCCcCCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhc
Confidence 10111 1223456678999999999999999999999998765
No 292
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=100.00 E-value=7.7e-35 Score=306.83 Aligned_cols=250 Identities=34% Similarity=0.548 Sum_probs=204.2
Q ss_pred CCCCCcccccCCeeEEEEEeCC-----CcEEEEEEeccCChh-hHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEE
Q 003158 513 FNSSTQIGQGGYGKVYKGILPD-----GTVVAVKRAQEGSLQ-GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 586 (843)
Q Consensus 513 ~~~~~~lg~G~~g~Vy~~~~~~-----~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~ 586 (843)
|++.+.||+|+||.||+|...+ +..||+|++...... ..+.+.+|+++++.++|+||+++++++.+.+..++||
T Consensus 1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~ 80 (258)
T smart00219 1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVM 80 (258)
T ss_pred CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEE
Confidence 3567889999999999999753 388999999765443 5678999999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCC
Q 003158 587 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 666 (843)
Q Consensus 587 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~ 666 (843)
||+++++|.+++.......+++..++.++.|++.||+|||+.+ ++||||||+||++++++.++|+|||++.......
T Consensus 81 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~---~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~ 157 (258)
T smart00219 81 EYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKN---FIHRDLAARNCLVGENLVVKISDFGLSRDLYDDD 157 (258)
T ss_pred eccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcCC---eeecccccceEEEccCCeEEEcccCCceeccccc
Confidence 9999999999997654433899999999999999999999998 9999999999999999999999999998765332
Q ss_pred CCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHh-CCCCCCCCcchHHHHHHHhhcccchhhccCC
Q 003158 667 IEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGN 745 (843)
Q Consensus 667 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 745 (843)
.. ......++..|+|||.+.+..++.++||||+||+++||++ |+.||..... ..... .+....
T Consensus 158 ~~------~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~-~~~~~---------~~~~~~ 221 (258)
T smart00219 158 YY------KKKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSN-EEVLE---------YLKKGY 221 (258)
T ss_pred cc------ccccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCH-HHHHH---------HHhcCC
Confidence 11 0112236789999999988889999999999999999999 7788764322 11111 111122
Q ss_pred CCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 003158 746 MGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRE 781 (843)
Q Consensus 746 ~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~ 781 (843)
....+..++.++.+++.+|+..+|++||++.++++.
T Consensus 222 ~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~ 257 (258)
T smart00219 222 RLPKPENCPPEIYKLMLQCWAEDPEDRPTFSELVEI 257 (258)
T ss_pred CCCCCCcCCHHHHHHHHHHCcCChhhCcCHHHHHhh
Confidence 233344567889999999999999999999998865
No 293
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=100.00 E-value=1.1e-34 Score=309.46 Aligned_cols=247 Identities=27% Similarity=0.417 Sum_probs=197.2
Q ss_pred cCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCC-hhhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEEec
Q 003158 511 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 588 (843)
Q Consensus 511 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e~ 588 (843)
..|+..+.||+|+||.||+|... +++.||+|.+.... ....+.+.+|+++++++.|+||+++++++.++...++||||
T Consensus 4 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 83 (277)
T cd06640 4 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEY 83 (277)
T ss_pred HhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEec
Confidence 45777889999999999999965 68899999987543 33456789999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCCC
Q 003158 589 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 668 (843)
Q Consensus 589 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 668 (843)
+++|+|.+++.. .++++..+..++.|++.||+|||+.+ ++|+||+|+||++++++.++|+|||++.......
T Consensus 84 ~~~~~L~~~i~~---~~l~~~~~~~~~~~l~~~l~~lh~~~---ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~-- 155 (277)
T cd06640 84 LGGGSALDLLRA---GPFDEFQIATMLKEILKGLDYLHSEK---KIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ-- 155 (277)
T ss_pred CCCCcHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCC---ccCcCCChhhEEEcCCCCEEEcccccceeccCCc--
Confidence 999999999864 34788889999999999999999998 9999999999999999999999999997654321
Q ss_pred CcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhccCCCCC
Q 003158 669 GIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGS 748 (843)
Q Consensus 669 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 748 (843)
.......++..|+|||++.+..++.++|||||||++|||++|..||........ . ..+.......
T Consensus 156 -----~~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~-~---------~~~~~~~~~~ 220 (277)
T cd06640 156 -----IKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRV-L---------FLIPKNNPPT 220 (277)
T ss_pred -----cccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhH-h---------hhhhcCCCCC
Confidence 112234578899999999988899999999999999999999999975432110 0 0111111223
Q ss_pred CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 003158 749 YPSECVEKFIKLALKCCQDETDARPSMSEVMR 780 (843)
Q Consensus 749 ~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~ 780 (843)
.+..++..+.+++.+||+.+|++||++.+++.
T Consensus 221 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 252 (277)
T cd06640 221 LTGEFSKPFKEFIDACLNKDPSFRPTAKELLK 252 (277)
T ss_pred CchhhhHHHHHHHHHHcccCcccCcCHHHHHh
Confidence 44556666777777777777766666666654
No 294
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=100.00 E-value=2.5e-35 Score=315.61 Aligned_cols=280 Identities=24% Similarity=0.400 Sum_probs=207.5
Q ss_pred CCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCChh-hHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEEecC
Q 003158 512 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ-GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFM 589 (843)
Q Consensus 512 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e~~ 589 (843)
+|+..+.||+|++|.||+|+.. +|+.||||.+...... ..+.+.+|+++++.++|+||+++++++.+.+..++||||+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEYM 80 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEecC
Confidence 5788999999999999999975 6899999998754332 3456788999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhcC-CCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCCC
Q 003158 590 SNGTLRDQLSAKS-KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 668 (843)
Q Consensus 590 ~~gsL~~~l~~~~-~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 668 (843)
+ ++|.+++.... ...+++..+..++.|+++||+|||+.+ ++||||||+||++++++.++|+|||++.......
T Consensus 81 ~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~-- 154 (284)
T cd07836 81 D-KDLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENR---VLHRDLKPQNLLINKRGELKLADFGLARAFGIPV-- 154 (284)
T ss_pred C-ccHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHHHEEECCCCcEEEeecchhhhhcCCc--
Confidence 7 58998886543 346899999999999999999999998 9999999999999999999999999997543211
Q ss_pred CcccceeeeeecccCCccCchhccc-CCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhccCCCC
Q 003158 669 GIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMG 747 (843)
Q Consensus 669 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 747 (843)
.......++..|+|||.+.+ ..++.++|||||||++|||++|+.||...... +........ ..
T Consensus 155 -----~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~-~~~~~~~~~----------~~ 218 (284)
T cd07836 155 -----NTFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNE-DQLLKIFRI----------MG 218 (284)
T ss_pred -----cccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcH-HHHHHHHHH----------hC
Confidence 11123346889999999876 45788999999999999999999999765432 211111100 00
Q ss_pred CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCCCCccCCCCCcc
Q 003158 748 SYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYV 823 (843)
Q Consensus 748 ~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~sa~e~L~Hp~f 823 (843)
.......+.+... .. +..+...+ ..... ....+..+....+++.+|++.||++|++++|+++||||
T Consensus 219 ~~~~~~~~~~~~~-~~-~~~~~~~~-~~~~~-------~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~~~f 284 (284)
T cd07836 219 TPTESTWPGISQL-PE-YKPTFPRY-PPQDL-------QQLFPHADPLGIDLLHRLLQLNPELRISAHDALQHPWF 284 (284)
T ss_pred CCChhhHHHHhcC-ch-hcccccCC-ChHHH-------HHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhcCCCC
Confidence 0111111111110 00 11111011 11111 11123345667789999999999999999999999998
No 295
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=100.00 E-value=1e-35 Score=313.89 Aligned_cols=199 Identities=29% Similarity=0.407 Sum_probs=175.2
Q ss_pred CCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCC---hhhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEEe
Q 003158 512 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 587 (843)
Q Consensus 512 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e 587 (843)
+|++.+.||+|+||.||+|... +++.||+|.+.... ....+.+.+|++++++++||||+++++++.+....++|+|
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVD 80 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEe
Confidence 4788899999999999999975 68999999987532 2345688999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCC
Q 003158 588 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 667 (843)
Q Consensus 588 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~ 667 (843)
|+++++|.+++... .++++..+..++.|+++||.|||+.+ ++|+||||+||++++++.++|+|||.+.......
T Consensus 81 ~~~~~~L~~~l~~~--~~l~~~~~~~~~~~i~~~l~~lh~~~---i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~- 154 (258)
T cd05578 81 LLLGGDLRYHLSQK--VKFSEEQVKFWICEIVLALEYLHSKG---IIHRDIKPDNILLDEQGHVHITDFNIATKVTPDT- 154 (258)
T ss_pred CCCCCCHHHHHHhc--CCcCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHeEEcCCCCEEEeecccccccCCCc-
Confidence 99999999999664 46889999999999999999999998 9999999999999999999999999987654321
Q ss_pred CCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCc
Q 003158 668 EGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 723 (843)
Q Consensus 668 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~ 723 (843)
......|+..|+|||.+.+..++.++|+||||+++|+|++|..||....
T Consensus 155 -------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~ 203 (258)
T cd05578 155 -------LTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHS 203 (258)
T ss_pred -------cccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCC
Confidence 1233457889999999998889999999999999999999999997544
No 296
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=100.00 E-value=2.6e-35 Score=319.60 Aligned_cols=288 Identities=23% Similarity=0.323 Sum_probs=202.4
Q ss_pred HcCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCCh--hhHHHHHHHHHHHHhccCCcccceeeeeecCC------
Q 003158 510 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEG------ 580 (843)
Q Consensus 510 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~------ 580 (843)
-++|++.+.||+|+||.||+|... +++.||||.+..... .....+.+|++++++++||||+++++++...+
T Consensus 11 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 90 (310)
T cd07865 11 VSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRY 90 (310)
T ss_pred hhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCC
Confidence 357999999999999999999965 689999998864322 22345678999999999999999999986543
Q ss_pred --cEEEEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccc
Q 003158 581 --EQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGL 658 (843)
Q Consensus 581 --~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGl 658 (843)
..++||||+. ++|.+++.... ..+++..++.++.|++.||+|||+++ ++|+||||+||+++.++.+||+|||+
T Consensus 91 ~~~~~lv~e~~~-~~l~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH~~~---i~H~dl~p~nil~~~~~~~kl~dfg~ 165 (310)
T cd07865 91 KGSFYLVFEFCE-HDLAGLLSNKN-VKFTLSEIKKVMKMLLNGLYYIHRNK---ILHRDMKAANILITKDGILKLADFGL 165 (310)
T ss_pred CceEEEEEcCCC-cCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHEEECCCCcEEECcCCC
Confidence 4599999995 58888886543 35889999999999999999999998 99999999999999999999999999
Q ss_pred cccCCCCCCCCcccceeeeeecccCCccCchhcccC-CCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhccc
Q 003158 659 SRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTH-KLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSM 737 (843)
Q Consensus 659 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~ 737 (843)
+.......... ........++..|+|||.+.+. .++.++||||||+++|||++|+.||....... .....
T Consensus 166 ~~~~~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~-~~~~~----- 236 (310)
T cd07865 166 ARAFSLSKNSK---PNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQH-QLTLI----- 236 (310)
T ss_pred cccccCCcccC---CCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHH-HHHHH-----
Confidence 98664332111 1112234578899999998764 47889999999999999999999987544321 11110
Q ss_pred chhhccCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCCCCccC
Q 003158 738 MFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSM 817 (843)
Q Consensus 738 ~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~sa~e~ 817 (843)
..+ .+..+.+..+....+ .++............+...+.. ...+....|++.+||..||++|||++|+
T Consensus 237 -~~~----~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~-----~~~~~~~~dli~~~l~~~P~~R~t~~e~ 304 (310)
T cd07865 237 -SQL----CGSITPEVWPGVDKL--ELFKKMELPQGQKRKVKERLKP-----YVKDPHALDLIDKLLVLDPAKRIDADTA 304 (310)
T ss_pred -HHH----hCCCChhhcccccch--hhhhhccCCCccchhhHHhccc-----ccCCHHHHHHHHHHhcCChhhccCHHHH
Confidence 000 111111111111000 0000000000000001111100 1123455689999999999999999999
Q ss_pred CCCCcc
Q 003158 818 LKHPYV 823 (843)
Q Consensus 818 L~Hp~f 823 (843)
|+||||
T Consensus 305 l~h~~f 310 (310)
T cd07865 305 LNHDFF 310 (310)
T ss_pred hcCCCC
Confidence 999998
No 297
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=100.00 E-value=2.9e-35 Score=323.11 Aligned_cols=289 Identities=24% Similarity=0.387 Sum_probs=208.3
Q ss_pred HcCCCCCCcccccCCeeEEEEEe-CCCcEEEEEEeccCC-hhhHHHHHHHHHHHHhccCCcccceeeeeecC-----CcE
Q 003158 510 TNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE-----GEQ 582 (843)
Q Consensus 510 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~-----~~~ 582 (843)
+++|++.+.||+|+||.||+|.. .+|+.||+|.+.... ......+.+|+.++++++|+||+++++++... ...
T Consensus 4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 83 (336)
T cd07849 4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDV 83 (336)
T ss_pred ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceE
Confidence 46899999999999999999985 468999999986422 22345678899999999999999999987543 357
Q ss_pred EEEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccC
Q 003158 583 MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLA 662 (843)
Q Consensus 583 ~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~ 662 (843)
++|+||++ ++|.+++.. ..+++..++.++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||++...
T Consensus 84 ~lv~e~~~-~~l~~~~~~---~~l~~~~~~~i~~ql~~aL~~LH~~~---ivH~dlkp~Nill~~~~~~kl~dfg~~~~~ 156 (336)
T cd07849 84 YIVQELME-TDLYKLIKT---QHLSNDHIQYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTNCDLKICDFGLARIA 156 (336)
T ss_pred EEEehhcc-cCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHEEECCCCCEEECcccceeec
Confidence 99999996 588888744 35889999999999999999999999 999999999999999999999999999765
Q ss_pred CCCCCCCcccceeeeeecccCCccCchhccc-CCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhh
Q 003158 663 PVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSV 741 (843)
Q Consensus 663 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~ 741 (843)
...... ........|+..|+|||.+.+ ..++.++||||+||++|||++|+.||...... ....... ..
T Consensus 157 ~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~-~~~~~~~------~~ 225 (336)
T cd07849 157 DPEHDH----TGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYL-HQLNLIL------GV 225 (336)
T ss_pred cccccc----cCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHH------HH
Confidence 432110 111233468899999998765 56889999999999999999999999654321 1111100 00
Q ss_pred ccCCCCCCCHHHHHHHHHHHH-HhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCCCCccCCCC
Q 003158 742 IDGNMGSYPSECVEKFIKLAL-KCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKH 820 (843)
Q Consensus 742 ~~~~~~~~~~~~~~~l~~l~~-~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~sa~e~L~H 820 (843)
.+..+.+....+..... ..+...|. .+... +....+..+....+++.+||..||++|||+.|+++|
T Consensus 226 ----~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--------~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~h 292 (336)
T cd07849 226 ----LGTPSQEDLNCIISLRARNYIKSLPF-KPKVP--------WNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAH 292 (336)
T ss_pred ----cCCCCHHHHHHhhchhhhhHHhhcCc-CCccc--------HHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 11111111111111111 11111111 11110 001123345667799999999999999999999999
Q ss_pred CcccCCCCC
Q 003158 821 PYVSSDVSG 829 (843)
Q Consensus 821 p~f~~~~~~ 829 (843)
|||..-...
T Consensus 293 p~~~~~~~~ 301 (336)
T cd07849 293 PYLEQYHDP 301 (336)
T ss_pred ccccccCCC
Confidence 999765543
No 298
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=100.00 E-value=2.7e-35 Score=317.14 Aligned_cols=284 Identities=22% Similarity=0.340 Sum_probs=206.3
Q ss_pred cCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCCh--hhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEEe
Q 003158 511 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 587 (843)
Q Consensus 511 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e 587 (843)
++|++.+.||+|++|+||+|... +++.||+|.+..... ...+.+.+|++++++++|+||+++++++.+....++|||
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 81 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFE 81 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEEe
Confidence 46888999999999999999965 689999998865322 223578899999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcC-CCcEEEeeccccccCCCCC
Q 003158 588 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDH-KFTAKVADFGLSRLAPVPD 666 (843)
Q Consensus 588 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~-~~~~kl~DfGla~~~~~~~ 666 (843)
|++ ++|.+++.......+++..++.++.||+.||+|||+++ ++||||||+||++++ ++.+||+|||++.......
T Consensus 82 ~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~---i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~~ 157 (294)
T PLN00009 82 YLD-LDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHR---VLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPV 157 (294)
T ss_pred ccc-ccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCCcceEEEECCCCEEEEcccccccccCCCc
Confidence 995 68888886655555678888899999999999999998 999999999999985 5679999999997543211
Q ss_pred CCCcccceeeeeecccCCccCchhccc-CCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhccCC
Q 003158 667 IEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGN 745 (843)
Q Consensus 667 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 745 (843)
.......+++.|+|||++.+ ..++.++||||+||++|+|+||+.||........ ....+. ..
T Consensus 158 -------~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~-~~~~~~------~~--- 220 (294)
T PLN00009 158 -------RTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDE-LFKIFR------IL--- 220 (294)
T ss_pred -------cccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHH------Hh---
Confidence 11123356789999999876 4578899999999999999999999976543221 111100 00
Q ss_pred CCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCCCCccCCCCCcccC
Q 003158 746 MGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSS 825 (843)
Q Consensus 746 ~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~sa~e~L~Hp~f~~ 825 (843)
+......+.....+-.. ....|..++.. .....+..+..+.+++.+|++.+|++||+++++++||||..
T Consensus 221 -~~~~~~~~~~~~~~~~~-~~~~~~~~~~~---------~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~~~~~~~ 289 (294)
T PLN00009 221 -GTPNEETWPGVTSLPDY-KSAFPKWPPKD---------LATVVPTLEPAGVDLLSKMLRLDPSKRITARAALEHEYFKD 289 (294)
T ss_pred -CCCChhhccccccchhh-hhhcccCCCCC---------HHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhcCchHhH
Confidence 00001111000000000 00011111110 01112344555678999999999999999999999999976
Q ss_pred C
Q 003158 826 D 826 (843)
Q Consensus 826 ~ 826 (843)
-
T Consensus 290 ~ 290 (294)
T PLN00009 290 L 290 (294)
T ss_pred H
Confidence 3
No 299
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=100.00 E-value=4.9e-35 Score=313.20 Aligned_cols=267 Identities=26% Similarity=0.430 Sum_probs=207.9
Q ss_pred cCCCCCCcccccCCeeEEEEEeC-----CCcEEEEEEeccCChh-hHHHHHHHHHHHHhccCCcccceeeeeec--CCcE
Q 003158 511 NNFNSSTQIGQGGYGKVYKGILP-----DGTVVAVKRAQEGSLQ-GEKEFLTEIQFLSRLHHRNLVSLVGYCDE--EGEQ 582 (843)
Q Consensus 511 ~~~~~~~~lg~G~~g~Vy~~~~~-----~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~nIv~l~~~~~~--~~~~ 582 (843)
..|+..+.||+|+||.||+|.+. +++.||||.+...... ..+++.+|+++++.++|+||+++++++.. ....
T Consensus 4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~ 83 (284)
T cd05038 4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSL 83 (284)
T ss_pred hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCce
Confidence 45777889999999999999853 3689999999865443 46789999999999999999999999877 5578
Q ss_pred EEEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccC
Q 003158 583 MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLA 662 (843)
Q Consensus 583 ~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~ 662 (843)
++||||+++++|.+++.... ..+++..++.++.|++.||+|||+.+ ++||||||+||+++.++.++|+|||.+...
T Consensus 84 ~lv~e~~~~~~l~~~l~~~~-~~~~~~~~~~~~~~l~~aL~~lH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~ 159 (284)
T cd05038 84 RLIMEYLPSGSLRDYLQRHR-DQINLKRLLLFSSQICKGMDYLGSQR---YIHRDLAARNILVESEDLVKISDFGLAKVL 159 (284)
T ss_pred EEEEecCCCCCHHHHHHhCc-cccCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHhEEEcCCCCEEEccccccccc
Confidence 99999999999999997643 25889999999999999999999998 999999999999999999999999999876
Q ss_pred CCCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHH-H---hhcccc
Q 003158 663 PVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNI-A---YQSSMM 738 (843)
Q Consensus 663 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~-~---~~~~~~ 738 (843)
...... ........++..|+|||.+.+..++.++|||||||++|||++|+.|+............ . .....+
T Consensus 160 ~~~~~~----~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 235 (284)
T cd05038 160 PEDKDY----YYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRL 235 (284)
T ss_pred ccCCcc----eeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHH
Confidence 522110 01111223556799999999889999999999999999999999998643221100000 0 000000
Q ss_pred hhhcc-CCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHh
Q 003158 739 FSVID-GNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 785 (843)
Q Consensus 739 ~~~~~-~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~ 785 (843)
...+. ......+..++.++.+++.+||+.+|++||++.+++++|+++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i 283 (284)
T cd05038 236 LELLKEGERLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRL 283 (284)
T ss_pred HHHHHcCCcCCCCccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhhc
Confidence 11111 112233456678899999999999999999999999999875
No 300
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=100.00 E-value=8e-35 Score=311.91 Aligned_cols=256 Identities=21% Similarity=0.381 Sum_probs=201.8
Q ss_pred CCCCCCcccccCCeeEEEEEe-CCCcEEEEEEeccCChhhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEEecCC
Q 003158 512 NFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMS 590 (843)
Q Consensus 512 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e~~~ 590 (843)
.|...+.||+|++|.||+|.. .+++.||+|++........+.+.+|+.+++.++|+||+++++++...+..++|+||++
T Consensus 20 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~~~ 99 (285)
T cd06648 20 YLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFLE 99 (285)
T ss_pred hhhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEeccC
Confidence 344567999999999999995 4789999999876555556678999999999999999999999999999999999999
Q ss_pred CCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCCCCc
Q 003158 591 NGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGI 670 (843)
Q Consensus 591 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~ 670 (843)
+++|.+++.. ..+++..+..++.|++.||+|||+.+ |+||||+|+||+++.++.++|+|||.+.......
T Consensus 100 ~~~L~~~~~~---~~~~~~~~~~~~~ql~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~---- 169 (285)
T cd06648 100 GGALTDIVTH---TRMNEEQIATVCLAVLKALSFLHAQG---VIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEV---- 169 (285)
T ss_pred CCCHHHHHHh---CCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCChhhEEEcCCCcEEEcccccchhhccCC----
Confidence 9999999866 34788999999999999999999999 9999999999999999999999999887543211
Q ss_pred ccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhccCCCCCCC
Q 003158 671 VPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYP 750 (843)
Q Consensus 671 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 750 (843)
.......|+..|+|||.+.+..++.++|||||||++|||++|+.||...... .....
T Consensus 170 ---~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~-~~~~~------------------- 226 (285)
T cd06648 170 ---PRRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPL-QAMKR------------------- 226 (285)
T ss_pred ---cccccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHH-HHHHH-------------------
Confidence 1112345889999999999888999999999999999999999998653321 11100
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCCCCccCCCCCcccCCC
Q 003158 751 SECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSSDV 827 (843)
Q Consensus 751 ~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~sa~e~L~Hp~f~~~~ 827 (843)
+.... .|...+ ....+....+++++|++.+|++|||++|+++||||..-.
T Consensus 227 ----------~~~~~------~~~~~~-----------~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~~ 276 (285)
T cd06648 227 ----------IRDNL------PPKLKN-----------LHKVSPRLRSFLDRMLVRDPAQRATAAELLNHPFLAKAG 276 (285)
T ss_pred ----------HHhcC------CCCCcc-----------cccCCHHHHHHHHHHcccChhhCcCHHHHccCcccccCC
Confidence 00000 000000 000122344678888889999999999999999997633
No 301
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=100.00 E-value=1.8e-34 Score=305.87 Aligned_cols=203 Identities=31% Similarity=0.450 Sum_probs=170.5
Q ss_pred cCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCC-----hhhHHHHHHHHHHHHhccCCcccceeeeeec--CCcE
Q 003158 511 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS-----LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDE--EGEQ 582 (843)
Q Consensus 511 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~--~~~~ 582 (843)
.+|+..+.||+|+||.||+|... +++.||+|.+.... ....+.+.+|+.+++.++||||+++++++.+ ....
T Consensus 2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (266)
T cd06651 2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTL 81 (266)
T ss_pred CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEE
Confidence 46888999999999999999964 68999999876422 1223568889999999999999999998865 3567
Q ss_pred EEEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccC
Q 003158 583 MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLA 662 (843)
Q Consensus 583 ~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~ 662 (843)
+++|||+++++|.+++.... .+++...+.++.|++.||+|||+.+ |+||||||+||++++++.+||+|||+++..
T Consensus 82 ~l~~e~~~~~~L~~~l~~~~--~l~~~~~~~~~~qi~~~l~~LH~~~---i~H~~l~p~nil~~~~~~~~l~dfg~~~~~ 156 (266)
T cd06651 82 TIFMEYMPGGSVKDQLKAYG--ALTESVTRKYTRQILEGMSYLHSNM---IVHRDIKGANILRDSAGNVKLGDFGASKRL 156 (266)
T ss_pred EEEEeCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEECCCCCEEEccCCCcccc
Confidence 89999999999999996543 4788889999999999999999998 999999999999999999999999998765
Q ss_pred CCCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCC
Q 003158 663 PVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 722 (843)
Q Consensus 663 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~ 722 (843)
...... ........++..|+|||.+.+..++.++|||||||++|||++|+.||...
T Consensus 157 ~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~ 212 (266)
T cd06651 157 QTICMS----GTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEY 212 (266)
T ss_pred cccccc----CCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCcccc
Confidence 321110 11112345788999999999988999999999999999999999999654
No 302
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=100.00 E-value=1.2e-35 Score=318.56 Aligned_cols=279 Identities=26% Similarity=0.384 Sum_probs=206.7
Q ss_pred cCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCC--hhhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEEe
Q 003158 511 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 587 (843)
Q Consensus 511 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e 587 (843)
++|++.+.||+|+||.||+|... +++.||+|.++... ....+.+.+|+++++.++|+||+++++++...+..++|||
T Consensus 1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e 80 (288)
T cd07833 1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFE 80 (288)
T ss_pred CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEe
Confidence 36888999999999999999975 58899999887532 2234678999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCC
Q 003158 588 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 667 (843)
Q Consensus 588 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~ 667 (843)
|++++.+..+... ...+++..++.++.|++.||.|||+.+ ++||||+|+||++++++.+||+|||++........
T Consensus 81 ~~~~~~l~~~~~~--~~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~~ 155 (288)
T cd07833 81 YVERTLLELLEAS--PGGLPPDAVRSYIWQLLQAIAYCHSHN---IIHRDIKPENILVSESGVLKLCDFGFARALRARPA 155 (288)
T ss_pred cCCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEECCCCCEEEEeeecccccCCCcc
Confidence 9988777665543 234889999999999999999999998 99999999999999999999999999987653321
Q ss_pred CCcccceeeeeecccCCccCchhcccC-CCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhccCCC
Q 003158 668 EGIVPAHVSTVVKGTPGYLDPEYFLTH-KLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNM 746 (843)
Q Consensus 668 ~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 746 (843)
.......++..|+|||++.+. .++.++||||||+++|||++|+.||........ ..... .. .
T Consensus 156 ------~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~-~~~~~------~~----~ 218 (288)
T cd07833 156 ------SPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQ-LYLIQ------KC----L 218 (288)
T ss_pred ------ccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHH------HH----h
Confidence 112334578899999999887 889999999999999999999999875433211 11100 00 0
Q ss_pred CCCCHHHHHHHHHHHHHhcccCCC----CCCCHHHHHHHHHHhhhhCCC-CCCCCCccccCCCCCCCCCCCCCccCCCCC
Q 003158 747 GSYPSECVEKFIKLALKCCQDETD----ARPSMSEVMRELESIWNMMPE-SDTKTPEFINSEHTSKEETPPSSSSMLKHP 821 (843)
Q Consensus 747 ~~~~~~~~~~l~~l~~~c~~~~p~----~RPs~~~vl~~L~~~~~~~~~-~~~~~~dll~~~L~~dp~~R~sa~e~L~Hp 821 (843)
+..+......+ ..++. +.|...+. ..+...++. ......+|+++|+..+|++|||+++++.||
T Consensus 219 ~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~ 286 (288)
T cd07833 219 GPLPPSHQELF--------SSNPRFAGVAFPEPSQP----ESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQHP 286 (288)
T ss_pred CCCCHHHhhhc--------ccCccccccccCCCCCc----HHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhcCC
Confidence 01111000000 00110 01111110 011111222 256677899999999999999999999999
Q ss_pred cc
Q 003158 822 YV 823 (843)
Q Consensus 822 ~f 823 (843)
||
T Consensus 287 ~f 288 (288)
T cd07833 287 YF 288 (288)
T ss_pred CC
Confidence 98
No 303
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=100.00 E-value=5.1e-35 Score=309.36 Aligned_cols=192 Identities=24% Similarity=0.384 Sum_probs=168.2
Q ss_pred ccccCCeeEEEEEeC-CCcEEEEEEeccCCh---hhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEEecCCCCCH
Q 003158 519 IGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTL 594 (843)
Q Consensus 519 lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e~~~~gsL 594 (843)
||+|+||.||+|... +++.||+|++..... ...+.+.+|+++++.++||||+++++++.++...++||||+++++|
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL 80 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence 699999999999975 589999999875332 2346789999999999999999999999999999999999999999
Q ss_pred HHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCCCCcccce
Q 003158 595 RDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAH 674 (843)
Q Consensus 595 ~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~ 674 (843)
.+++.... .+++..+..++.|+++||+|||+.+ ++|+||||+||+++.++.++|+|||.+.......
T Consensus 81 ~~~l~~~~--~l~~~~~~~~~~~i~~~l~~lH~~~---~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~-------- 147 (262)
T cd05572 81 WTILRDRG--LFDEYTARFYIACVVLAFEYLHNRG---IIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQ-------- 147 (262)
T ss_pred HHHHhhcC--CCCHHHHHHHHHHHHHHHHHHhhCC---cccCCCCHHHEEEcCCCCEEEeeCCcccccCccc--------
Confidence 99996643 4788999999999999999999998 9999999999999999999999999998654321
Q ss_pred eeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCc
Q 003158 675 VSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 723 (843)
Q Consensus 675 ~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~ 723 (843)
......++..|+|||.+.+..++.++|+||+|+++|||++|..||....
T Consensus 148 ~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~ 196 (262)
T cd05572 148 KTWTFCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDD 196 (262)
T ss_pred ccccccCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCC
Confidence 1123457889999999988889999999999999999999999997544
No 304
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=100.00 E-value=5.1e-35 Score=313.62 Aligned_cols=212 Identities=27% Similarity=0.401 Sum_probs=175.4
Q ss_pred ccHHHHHHHHcCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCChhhHHHHHHHHHHHHhc-cCCcccceeeeee-
Q 003158 501 FTYGEMALATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRL-HHRNLVSLVGYCD- 577 (843)
Q Consensus 501 ~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~- 577 (843)
+.++.+....++|++.+.||+|+||.||+|... +++.+|+|++.... ....++.+|+.+++.+ +|+||+++++++.
T Consensus 8 ~~~~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~ 86 (286)
T cd06638 8 IIFDSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIH-DIDEEIEAEYNILKALSDHPNVVKFYGMYYK 86 (286)
T ss_pred EEeecCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeecccc-chHHHHHHHHHHHHHHhcCCCeeeeeeeeee
Confidence 334556667889999999999999999999964 68899999876422 2345688899999999 6999999999873
Q ss_pred ----cCCcEEEEEecCCCCCHHHHHhhc--CCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcE
Q 003158 578 ----EEGEQMLVYEFMSNGTLRDQLSAK--SKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTA 651 (843)
Q Consensus 578 ----~~~~~~lV~e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~ 651 (843)
.++..++||||+++++|.+++... ....+++..+..++.|+++||.|||+.+ |+||||||+||++++++.+
T Consensus 87 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~nili~~~~~~ 163 (286)
T cd06638 87 KDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNK---TIHRDVKGNNILLTTEGGV 163 (286)
T ss_pred cccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCC---ccccCCCHHhEEECCCCCE
Confidence 345789999999999999988642 2346888899999999999999999998 9999999999999999999
Q ss_pred EEeeccccccCCCCCCCCcccceeeeeecccCCccCchhccc-----CCCCchhhhHHHHHHHHHHHhCCCCCCCCc
Q 003158 652 KVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT-----HKLTDKSDVYSLGVVFLELLTGMQPISHGK 723 (843)
Q Consensus 652 kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~sDvwS~G~~l~elltg~~pf~~~~ 723 (843)
||+|||+++...... .......|++.|+|||++.. ..++.++||||+||++|||++|+.||....
T Consensus 164 kl~dfg~~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~ 233 (286)
T cd06638 164 KLVDFGVSAQLTSTR-------LRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLH 233 (286)
T ss_pred EEccCCceeecccCC-------CccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCc
Confidence 999999987653221 11223458899999999853 457889999999999999999999997543
No 305
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=100.00 E-value=2.9e-35 Score=321.94 Aligned_cols=204 Identities=24% Similarity=0.298 Sum_probs=165.3
Q ss_pred Cccccc--CCeeEEEEEeC-CCcEEEEEEeccCC--hhhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEEecCCC
Q 003158 517 TQIGQG--GYGKVYKGILP-DGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSN 591 (843)
Q Consensus 517 ~~lg~G--~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e~~~~ 591 (843)
..||+| +||+||+|... +|+.||+|++.... ....+.+.+|+.+++.++||||++++++|..++..++||||+.+
T Consensus 4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~ 83 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAY 83 (328)
T ss_pred HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccC
Confidence 456766 99999999964 79999999987532 22346788999999999999999999999999999999999999
Q ss_pred CCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCCCCcc
Q 003158 592 GTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIV 671 (843)
Q Consensus 592 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~ 671 (843)
++|.+++.......+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.++++||+.+............
T Consensus 84 ~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~---ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (328)
T cd08226 84 GSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNG---YIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKAKV 160 (328)
T ss_pred CCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEeCCCcEEEechHHHhhhhccCccccc
Confidence 99999998765556889999999999999999999998 999999999999999999999999865433211100000
Q ss_pred cceeeeeecccCCccCchhccc--CCCCchhhhHHHHHHHHHHHhCCCCCCCCc
Q 003158 672 PAHVSTVVKGTPGYLDPEYFLT--HKLTDKSDVYSLGVVFLELLTGMQPISHGK 723 (843)
Q Consensus 672 ~~~~~~~~~gt~~y~aPE~~~~--~~~~~~sDvwS~G~~l~elltg~~pf~~~~ 723 (843)
.........++..|+|||++.+ ..++.++|||||||++|||++|+.||....
T Consensus 161 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~ 214 (328)
T cd08226 161 VYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDML 214 (328)
T ss_pred cccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcC
Confidence 0000111235667999999976 347889999999999999999999997654
No 306
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=100.00 E-value=6.6e-35 Score=312.09 Aligned_cols=210 Identities=29% Similarity=0.454 Sum_probs=176.1
Q ss_pred cHHHHHHHHcCCCCCCcccccCCeeEEEEEe-CCCcEEEEEEeccCChhhHHHHHHHHHHHHhc-cCCcccceeeeeec-
Q 003158 502 TYGEMALATNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDE- 578 (843)
Q Consensus 502 ~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~- 578 (843)
++.++....+.|++.+.||+|+||.||+|.. .+++.||+|++.... ....++..|+.+++++ +|+||+++++++..
T Consensus 7 ~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~ 85 (282)
T cd06636 7 DLSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE-DEEEEIKLEINMLKKYSHHRNIATYYGAFIKK 85 (282)
T ss_pred hhhhhcChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecCh-HHHHHHHHHHHHHHHhcCCCcEEEEeeehhcc
Confidence 4455556778999999999999999999996 468999999986533 3345688899999998 69999999999843
Q ss_pred -----CCcEEEEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEE
Q 003158 579 -----EGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKV 653 (843)
Q Consensus 579 -----~~~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl 653 (843)
....++||||+++|+|.+++.......+++..++.++.|++.||.|||+.+ |+||||||+||++++++.++|
T Consensus 86 ~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~---ivH~dl~~~nili~~~~~~~l 162 (282)
T cd06636 86 SPPGHDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHK---VIHRDIKGQNVLLTENAEVKL 162 (282)
T ss_pred cccCCCCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEE
Confidence 457899999999999999997765566888889999999999999999999 999999999999999999999
Q ss_pred eeccccccCCCCCCCCcccceeeeeecccCCccCchhcc-----cCCCCchhhhHHHHHHHHHHHhCCCCCCCC
Q 003158 654 ADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFL-----THKLTDKSDVYSLGVVFLELLTGMQPISHG 722 (843)
Q Consensus 654 ~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDvwS~G~~l~elltg~~pf~~~ 722 (843)
+|||++....... .......|+..|+|||.+. ...++.++|||||||++|||++|+.||...
T Consensus 163 ~dfg~~~~~~~~~-------~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~ 229 (282)
T cd06636 163 VDFGVSAQLDRTV-------GRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDM 229 (282)
T ss_pred eeCcchhhhhccc-------cCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCcccc
Confidence 9999987543211 1112345889999999986 346788999999999999999999999654
No 307
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=5.2e-35 Score=313.73 Aligned_cols=200 Identities=28% Similarity=0.384 Sum_probs=171.2
Q ss_pred cCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCCh-hhHHHHHHHHHHHHhccCCcccceeeeeecC--CcEEEEE
Q 003158 511 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE--GEQMLVY 586 (843)
Q Consensus 511 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~--~~~~lV~ 586 (843)
++|+..+.||.|++|.||+|... +++.||+|.+..... ....++.+|+++++.++||||++++++|.+. +..++||
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 80 (287)
T cd06621 1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAM 80 (287)
T ss_pred CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEE
Confidence 46788899999999999999974 689999999875332 3456789999999999999999999998543 4689999
Q ss_pred ecCCCCCHHHHHhh--cCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCC
Q 003158 587 EFMSNGTLRDQLSA--KSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPV 664 (843)
Q Consensus 587 e~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~ 664 (843)
||+++++|.+++.. .....+++..+..++.|+++||.|||+.+ ++|+||+|+||++++++.++|+|||++.....
T Consensus 81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~---i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~ 157 (287)
T cd06621 81 EYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRK---IIHRDIKPSNILLTRKGQVKLCDFGVSGELVN 157 (287)
T ss_pred EecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEecCCeEEEeeccccccccc
Confidence 99999999998754 23345788899999999999999999998 99999999999999999999999999875432
Q ss_pred CCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCC
Q 003158 665 PDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 722 (843)
Q Consensus 665 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~ 722 (843)
.. .....++..|+|||.+.+..++.++||||+||++|||++|+.||...
T Consensus 158 ~~---------~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~ 206 (287)
T cd06621 158 SL---------AGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPE 206 (287)
T ss_pred cc---------cccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcc
Confidence 11 12335778999999999999999999999999999999999999754
No 308
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=100.00 E-value=2.8e-35 Score=323.86 Aligned_cols=283 Identities=23% Similarity=0.360 Sum_probs=206.8
Q ss_pred cCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCChhhHHHHHHHHHHHHhccCCcccceeeeeecC----------
Q 003158 511 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE---------- 579 (843)
Q Consensus 511 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~---------- 579 (843)
.+|.+.+.||+|+||.||+|... +++.||+|.+........+.+.+|+++++.++||||+++++++...
T Consensus 5 ~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~ 84 (342)
T cd07854 5 SRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVGS 84 (342)
T ss_pred cceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhccccccccccccc
Confidence 67899999999999999999964 6899999998766555567789999999999999999999876543
Q ss_pred ----CcEEEEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcC-CCcEEEe
Q 003158 580 ----GEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDH-KFTAKVA 654 (843)
Q Consensus 580 ----~~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~-~~~~kl~ 654 (843)
...++||||++ ++|.+++.. ..+++..++.++.||++||.|||+.+ |+||||||+||+++. ++.+|++
T Consensus 85 ~~~~~~~~lv~e~~~-~~L~~~~~~---~~l~~~~~~~~~~qi~~aL~~LH~~g---ivH~dikp~Nili~~~~~~~kl~ 157 (342)
T cd07854 85 LTELNSVYIVQEYME-TDLANVLEQ---GPLSEEHARLFMYQLLRGLKYIHSAN---VLHRDLKPANVFINTEDLVLKIG 157 (342)
T ss_pred ccccceEEEEeeccc-ccHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEEcCCCceEEEC
Confidence 35789999996 599888853 24788999999999999999999999 999999999999974 5678999
Q ss_pred eccccccCCCCCCCCcccceeeeeecccCCccCchhccc-CCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHh
Q 003158 655 DFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAY 733 (843)
Q Consensus 655 DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~ 733 (843)
|||+++........ ........++..|+|||.+.+ ..++.++|||||||++|||++|+.||...........
T Consensus 158 dfg~~~~~~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~--- 230 (342)
T cd07854 158 DFGLARIVDPHYSH----KGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQL--- 230 (342)
T ss_pred CcccceecCCcccc----ccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH---
Confidence 99999765322110 111122357889999998764 5678899999999999999999999976554322111
Q ss_pred hcccchhhccCCCCCCCHHHHHHH-HHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCC
Q 003158 734 QSSMMFSVIDGNMGSYPSECVEKF-IKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPP 812 (843)
Q Consensus 734 ~~~~~~~~~~~~~~~~~~~~~~~l-~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~ 812 (843)
.++. .+....+....+ ..+...+.......+.+..+ ..+..+....+|+.+||+.||++|+
T Consensus 231 -------~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~li~~~L~~dP~~R~ 292 (342)
T cd07854 231 -------ILES-VPVVREEDRNELLNVIPSFVRNDGGEPRRPLRD----------LLPGVNPEALDFLEQILTFNPMDRL 292 (342)
T ss_pred -------HHHh-cCCCChHHhhhhhhhhhhhhhhcccccCCCHHH----------HccCCCHHHHHHHHHHhCCCchhcc
Confidence 1111 111111111111 12222222112112222221 1233445566899999999999999
Q ss_pred CCccCCCCCcccC
Q 003158 813 SSSSMLKHPYVSS 825 (843)
Q Consensus 813 sa~e~L~Hp~f~~ 825 (843)
|++|++.||||+.
T Consensus 293 t~~ell~h~~~~~ 305 (342)
T cd07854 293 TAEEALMHPYMSC 305 (342)
T ss_pred CHHHHhCCCcccc
Confidence 9999999999974
No 309
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=100.00 E-value=1.5e-34 Score=307.73 Aligned_cols=255 Identities=29% Similarity=0.437 Sum_probs=199.9
Q ss_pred CCCCCcccccCCeeEEEEEeC----CCcEEEEEEeccCC--hhhHHHHHHHHHHHHhccCCcccceeeeeecCC------
Q 003158 513 FNSSTQIGQGGYGKVYKGILP----DGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEG------ 580 (843)
Q Consensus 513 ~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~------ 580 (843)
|.+.+.||+|+||.||+|.+. +++.||||++.... ....+++.+|+++++.++||||+++++++....
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 80 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLP 80 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCccc
Confidence 566789999999999999853 36889999987542 233567889999999999999999999885432
Q ss_pred cEEEEEecCCCCCHHHHHhhc----CCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeec
Q 003158 581 EQMLVYEFMSNGTLRDQLSAK----SKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADF 656 (843)
Q Consensus 581 ~~~lV~e~~~~gsL~~~l~~~----~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~Df 656 (843)
..++++||+++|+|.+++... ....+++...+.++.|++.||+|||+.+ |+||||||+||++++++.+||+||
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~---i~H~dikp~nili~~~~~~kl~df 157 (273)
T cd05074 81 IPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKN---FIHRDLAARNCMLNENMTVCVADF 157 (273)
T ss_pred ceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC---EeecccchhhEEEcCCCCEEECcc
Confidence 247899999999999887532 1224788889999999999999999998 999999999999999999999999
Q ss_pred cccccCCCCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHh-CCCCCCCCcchHHHHHHHhhc
Q 003158 657 GLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQS 735 (843)
Q Consensus 657 Gla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~ellt-g~~pf~~~~~~~~~~~~~~~~ 735 (843)
|.++....... ........+++.|++||.+....++.++|||||||++|||++ |+.||..... ......
T Consensus 158 g~~~~~~~~~~-----~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~-~~~~~~---- 227 (273)
T cd05074 158 GLSKKIYSGDY-----YRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVEN-SEIYNY---- 227 (273)
T ss_pred cccccccCCcc-----eecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCH-HHHHHH----
Confidence 99986542211 011122335678999999998889999999999999999999 8888865432 111111
Q ss_pred ccchhhccCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHh
Q 003158 736 SMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 785 (843)
Q Consensus 736 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~ 785 (843)
+........+..++..+.+++.+||+.+|++||++.++++.|+++
T Consensus 228 -----~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~ 272 (273)
T cd05074 228 -----LIKGNRLKQPPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLELI 272 (273)
T ss_pred -----HHcCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 111111223345667899999999999999999999999999865
No 310
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=100.00 E-value=1.8e-35 Score=324.39 Aligned_cols=290 Identities=22% Similarity=0.360 Sum_probs=212.7
Q ss_pred HcCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCCh--hhHHHHHHHHHHHHhccCCcccceeeeeec----CCcE
Q 003158 510 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDE----EGEQ 582 (843)
Q Consensus 510 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~----~~~~ 582 (843)
.++|++.+.||+|+||.||+|... +++.||+|++..... ...+.+.+|+.+++.++||||+++++++.. ....
T Consensus 4 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 83 (334)
T cd07855 4 GSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDV 83 (334)
T ss_pred hhceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceE
Confidence 368999999999999999999964 699999999875422 334677889999999999999999998753 3468
Q ss_pred EEEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccC
Q 003158 583 MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLA 662 (843)
Q Consensus 583 ~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~ 662 (843)
++||||+. |+|.+++... ..+++..++.++.||++||.|||+.+ |+||||||+||++++++.+||+|||++...
T Consensus 84 ~lv~e~~~-~~l~~~~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~ 157 (334)
T cd07855 84 YVVMDLME-SDLHHIIHSD--QPLTEEHIRYFLYQLLRGLKYIHSAN---VIHRDLKPSNLLVNEDCELRIGDFGMARGL 157 (334)
T ss_pred EEEEehhh-hhHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCcEEecccccceee
Confidence 99999995 6999998654 34889999999999999999999998 999999999999999999999999999765
Q ss_pred CCCCCCCcccceeeeeecccCCccCchhccc-CCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhh
Q 003158 663 PVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSV 741 (843)
Q Consensus 663 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~ 741 (843)
...... .........|+..|+|||.+.+ ..++.++|||||||++|||++|+.||...... .......
T Consensus 158 ~~~~~~---~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~-~~~~~~~-------- 225 (334)
T cd07855 158 SSSPTE---HKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYV-HQLKLIL-------- 225 (334)
T ss_pred cccCcC---CCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChH-HHHHHHH--------
Confidence 432211 1111233468889999999866 56889999999999999999999999654432 1111110
Q ss_pred ccCCCCCCCHHHHHHH-HHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCCCCccCCCC
Q 003158 742 IDGNMGSYPSECVEKF-IKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKH 820 (843)
Q Consensus 742 ~~~~~~~~~~~~~~~l-~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~sa~e~L~H 820 (843)
...+..+.+..... .+.+..+++..+...+... ....+.....+.+++.+||+.||++|||+++++.|
T Consensus 226 --~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~ 294 (334)
T cd07855 226 --SVLGSPSEEVLNRIGSDRVRKYIQNLPRKQPVPW---------SKIFPKASPEALDLLSQMLQFDPEERITVEQALQH 294 (334)
T ss_pred --HHhCCChhHhhhhhchhhHHHHHhhcccCCCCCH---------HHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 01111122221111 1222233333333222211 01123345556789999999999999999999999
Q ss_pred CcccCCCC
Q 003158 821 PYVSSDVS 828 (843)
Q Consensus 821 p~f~~~~~ 828 (843)
|||..-..
T Consensus 295 ~~~~~~~~ 302 (334)
T cd07855 295 PFLAQYHD 302 (334)
T ss_pred hhhhhccC
Confidence 99965443
No 311
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=100.00 E-value=2.4e-34 Score=303.22 Aligned_cols=199 Identities=30% Similarity=0.480 Sum_probs=172.9
Q ss_pred CCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCC-----hhhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEE
Q 003158 512 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS-----LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLV 585 (843)
Q Consensus 512 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV 585 (843)
+|+..+.||+|+||.||+|... +++.||+|.+.... .+..+.+.+|+++++.++|+||+++++++.++...++|
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIF 80 (258)
T ss_pred CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEE
Confidence 4777889999999999999975 78999999886433 22346789999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCC
Q 003158 586 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVP 665 (843)
Q Consensus 586 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~ 665 (843)
|||+++++|.+++.... ++++..+..++.|+++||+|||+.+ |+|+||+|+||++++++.+||+|||++......
T Consensus 81 ~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~ 155 (258)
T cd06632 81 LELVPGGSLAKLLKKYG--SFPEPVIRLYTRQILLGLEYLHDRN---TVHRDIKGANILVDTNGVVKLADFGMAKQVVEF 155 (258)
T ss_pred EEecCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEccCccceecccc
Confidence 99999999999996543 4788999999999999999999999 999999999999999999999999998765422
Q ss_pred CCCCcccceeeeeecccCCccCchhcccCC-CCchhhhHHHHHHHHHHHhCCCCCCCCc
Q 003158 666 DIEGIVPAHVSTVVKGTPGYLDPEYFLTHK-LTDKSDVYSLGVVFLELLTGMQPISHGK 723 (843)
Q Consensus 666 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~sDvwS~G~~l~elltg~~pf~~~~ 723 (843)
. ......++..|+|||.+.... ++.++|+|||||++|+|++|+.||....
T Consensus 156 ~--------~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~ 206 (258)
T cd06632 156 S--------FAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLE 206 (258)
T ss_pred c--------cccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCc
Confidence 1 123345888999999998766 8999999999999999999999996543
No 312
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=100.00 E-value=3e-34 Score=304.65 Aligned_cols=251 Identities=24% Similarity=0.354 Sum_probs=188.9
Q ss_pred cccccCCeeEEEEEeCCC---cEEEEEEeccCC-hhhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEEecCCCCC
Q 003158 518 QIGQGGYGKVYKGILPDG---TVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGT 593 (843)
Q Consensus 518 ~lg~G~~g~Vy~~~~~~~---~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e~~~~gs 593 (843)
.||+|+||+||+|...++ ..+++|.+.... ....+.+.+|+.+++.++||||++++++|.+....++||||+++|+
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~ 81 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELGD 81 (268)
T ss_pred cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCCCc
Confidence 599999999999985433 356677766433 3345789999999999999999999999999999999999999999
Q ss_pred HHHHHhhcC--CCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCCCCcc
Q 003158 594 LRDQLSAKS--KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIV 671 (843)
Q Consensus 594 L~~~l~~~~--~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~ 671 (843)
|.++++... ....++..++.++.||++||+|||+.+ ++||||||+|||++.++.+||+|||++........
T Consensus 82 L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~---i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~---- 154 (268)
T cd05086 82 LKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHN---FLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDY---- 154 (268)
T ss_pred HHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCC---eeccCCccceEEEcCCccEEecccccccccCcchh----
Confidence 999997642 234566778889999999999999998 99999999999999999999999999864321110
Q ss_pred cceeeeeecccCCccCchhccc-------CCCCchhhhHHHHHHHHHHHh-CCCCCCCCcchHHHHHHHhhcccchhhcc
Q 003158 672 PAHVSTVVKGTPGYLDPEYFLT-------HKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVID 743 (843)
Q Consensus 672 ~~~~~~~~~gt~~y~aPE~~~~-------~~~~~~sDvwS~G~~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 743 (843)
........++..|+|||++.. ..++.++|||||||++|||++ |..||..... .+........ ......+
T Consensus 155 -~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~-~~~~~~~~~~-~~~~~~~ 231 (268)
T cd05086 155 -IETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSD-REVLNHVIKD-QQVKLFK 231 (268)
T ss_pred -hhcccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCH-HHHHHHHHhh-cccccCC
Confidence 011123457889999999853 245778999999999999997 5667764432 2222211111 1111111
Q ss_pred CCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 003158 744 GNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMREL 782 (843)
Q Consensus 744 ~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L 782 (843)
+..+..+.+.+.+++..|| .+|++||+++++++.|
T Consensus 232 ---~~~~~~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~~l 266 (268)
T cd05086 232 ---PQLELPYSERWYEVLQFCW-LSPEKRATAEEVHRLL 266 (268)
T ss_pred ---CccCCCCcHHHHHHHHHHh-hCcccCCCHHHHHHHh
Confidence 2223335677888999999 5799999999998876
No 313
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=100.00 E-value=1.7e-34 Score=305.80 Aligned_cols=199 Identities=28% Similarity=0.443 Sum_probs=174.4
Q ss_pred cCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCC-hhhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEEec
Q 003158 511 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 588 (843)
Q Consensus 511 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e~ 588 (843)
++|+..+.||+|+||.||+|... +++.||+|.+.... ....+++.+|++++++++||||+++++++..++..++|+||
T Consensus 1 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (265)
T cd06605 1 DDLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEY 80 (265)
T ss_pred CcchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEEe
Confidence 35777889999999999999975 68999999987643 34456789999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhc-CCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCC
Q 003158 589 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHT-EADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 667 (843)
Q Consensus 589 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~-~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~ 667 (843)
+++++|.+++.... .++++..+..++.|+++||+|||+ .+ ++|+||||+||++++++.++|+|||.+.......
T Consensus 81 ~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lH~~~~---i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~- 155 (265)
T cd06605 81 MDGGSLDKILKEVQ-GRIPERILGKIAVAVLKGLTYLHEKHK---IIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSL- 155 (265)
T ss_pred cCCCcHHHHHHHcc-CCCCHHHHHHHHHHHHHHHHHHcCCCC---eecCCCCHHHEEECCCCCEEEeecccchhhHHHH-
Confidence 99999999997643 568889999999999999999999 88 9999999999999999999999999987543211
Q ss_pred CCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCC
Q 003158 668 EGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 722 (843)
Q Consensus 668 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~ 722 (843)
.....++..|+|||.+.+..++.++|||||||++|+|++|+.||...
T Consensus 156 --------~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~ 202 (265)
T cd06605 156 --------AKTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPE 202 (265)
T ss_pred --------hhcccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCcc
Confidence 11156888999999999999999999999999999999999999654
No 314
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=9.7e-35 Score=312.15 Aligned_cols=199 Identities=27% Similarity=0.365 Sum_probs=168.8
Q ss_pred CCCCCCcccccCCeeEEEEEe----CCCcEEEEEEeccCCh----hhHHHHHHHHHHHHhc-cCCcccceeeeeecCCcE
Q 003158 512 NFNSSTQIGQGGYGKVYKGIL----PDGTVVAVKRAQEGSL----QGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQ 582 (843)
Q Consensus 512 ~~~~~~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~~----~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~ 582 (843)
+|++.+.||+|+||.||+|.. .+|+.||+|++..... ...+.+.+|+++++++ +|+||+++++++..+...
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKL 80 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeE
Confidence 477889999999999999985 3689999999875322 2245678899999999 599999999999999999
Q ss_pred EEEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccC
Q 003158 583 MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLA 662 (843)
Q Consensus 583 ~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~ 662 (843)
++||||+++++|.+++... .++++..+..++.|+++||.|||+.+ ++||||||+||++++++.+||+|||++...
T Consensus 81 ~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~al~~lH~~~---i~H~dl~p~nil~~~~~~~kl~dfg~~~~~ 155 (290)
T cd05613 81 HLILDYINGGELFTHLSQR--ERFKEQEVQIYSGEIVLALEHLHKLG---IIYRDIKLENILLDSNGHVVLTDFGLSKEF 155 (290)
T ss_pred EEEEecCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHeEECCCCCEEEeeCccceec
Confidence 9999999999999999764 35788889999999999999999998 999999999999999999999999999765
Q ss_pred CCCCCCCcccceeeeeecccCCccCchhcccC--CCCchhhhHHHHHHHHHHHhCCCCCCC
Q 003158 663 PVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTH--KLTDKSDVYSLGVVFLELLTGMQPISH 721 (843)
Q Consensus 663 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~sDvwS~G~~l~elltg~~pf~~ 721 (843)
..... .......|+..|+|||.+.+. .++.++||||||+++|+|++|+.||..
T Consensus 156 ~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~ 210 (290)
T cd05613 156 HEDEV------ERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTV 210 (290)
T ss_pred ccccc------cccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCc
Confidence 33211 111234588899999998753 467899999999999999999999863
No 315
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=100.00 E-value=3.7e-34 Score=303.31 Aligned_cols=203 Identities=29% Similarity=0.433 Sum_probs=170.2
Q ss_pred cCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCC-----hhhHHHHHHHHHHHHhccCCcccceeeeeecC--CcE
Q 003158 511 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS-----LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE--GEQ 582 (843)
Q Consensus 511 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~--~~~ 582 (843)
++|++.+.||+|+||.||+|... +++.||+|.+.... ....+.+.+|++++++++||||+++++++.+. ...
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTL 81 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceE
Confidence 46888999999999999999964 58999999875321 12245788899999999999999999998653 467
Q ss_pred EEEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccC
Q 003158 583 MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLA 662 (843)
Q Consensus 583 ~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~ 662 (843)
++||||+++++|.+++.... .+++...+.++.|++.||+|||+.+ ++|+||||+||++++++.++|+|||+++..
T Consensus 82 ~~v~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~l~~~l~~lH~~~---i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~ 156 (265)
T cd06652 82 SIFMEHMPGGSIKDQLKSYG--ALTENVTRKYTRQILEGVSYLHSNM---IVHRDIKGANILRDSVGNVKLGDFGASKRL 156 (265)
T ss_pred EEEEEecCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEecCCCCEEECcCcccccc
Confidence 89999999999999986543 4778888999999999999999999 999999999999999999999999999765
Q ss_pred CCCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCC
Q 003158 663 PVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 722 (843)
Q Consensus 663 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~ 722 (843)
...... ........|+..|+|||.+.+..++.++|||||||++|||++|+.||...
T Consensus 157 ~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~ 212 (265)
T cd06652 157 QTICLS----GTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEF 212 (265)
T ss_pred cccccc----ccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCcc
Confidence 321110 11122345888999999999888999999999999999999999999643
No 316
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=100.00 E-value=1.7e-34 Score=304.52 Aligned_cols=237 Identities=24% Similarity=0.409 Sum_probs=190.0
Q ss_pred CcccccCCeeEEEEEeCC-C----------cEEEEEEeccCChhhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEE
Q 003158 517 TQIGQGGYGKVYKGILPD-G----------TVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLV 585 (843)
Q Consensus 517 ~~lg~G~~g~Vy~~~~~~-~----------~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV 585 (843)
+.||+|+||.||+|...+ + ..|++|.+...... ...+.+|+.+++.++||||+++++++.. ...++|
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv 78 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD-SLAFFETASLMSQLSHKHLVKLYGVCVR-DENIMV 78 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh-HHHHHHHHHHHHcCCCcchhheeeEEec-CCcEEE
Confidence 468999999999999754 3 25788887654333 6788999999999999999999999988 788999
Q ss_pred EecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCC-------cEEEeeccc
Q 003158 586 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKF-------TAKVADFGL 658 (843)
Q Consensus 586 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~-------~~kl~DfGl 658 (843)
|||+++|+|.+++..... .+++..++.++.||+.||+|||+++ |+||||||+||+++.++ .+||+|||+
T Consensus 79 ~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~ 154 (259)
T cd05037 79 EEYVKFGPLDVFLHREKN-NVSLHWKLDVAKQLASALHYLEDKK---LVHGNVCGKNILVARYGLNEGYVPFIKLSDPGI 154 (259)
T ss_pred EEcCCCCcHHHHHHhhcc-CCCHHHHHHHHHHHHHHHHHHhhCC---eecccCccceEEEecCccccCCceeEEeCCCCc
Confidence 999999999999976442 5888899999999999999999998 99999999999999888 799999999
Q ss_pred cccCCCCCCCCcccceeeeeecccCCccCchhcccC--CCCchhhhHHHHHHHHHHHh-CCCCCCCCcchHHHHHHHhhc
Q 003158 659 SRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTH--KLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQS 735 (843)
Q Consensus 659 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~sDvwS~G~~l~ellt-g~~pf~~~~~~~~~~~~~~~~ 735 (843)
+..... .....++..|+|||++.+. .++.++|||||||++|||++ |..||...... .... .+.
T Consensus 155 a~~~~~-----------~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~-~~~~-~~~- 220 (259)
T cd05037 155 PITVLS-----------REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSS-EKER-FYQ- 220 (259)
T ss_pred cccccc-----------ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCch-hHHH-HHh-
Confidence 976432 1223466789999999876 78999999999999999999 57777654321 1111 111
Q ss_pred ccchhhccCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 003158 736 SMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMREL 782 (843)
Q Consensus 736 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L 782 (843)
.......+ ....+.+++.+||..+|.+||++.++++.|
T Consensus 221 -------~~~~~~~~--~~~~~~~li~~~l~~~p~~Rpt~~~il~~l 258 (259)
T cd05037 221 -------DQHRLPMP--DCAELANLINQCWTYDPTKRPSFRAILRDL 258 (259)
T ss_pred -------cCCCCCCC--CchHHHHHHHHHhccChhhCCCHHHHHHhc
Confidence 11111111 127888999999999999999999998875
No 317
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=100.00 E-value=2.2e-34 Score=304.56 Aligned_cols=202 Identities=25% Similarity=0.425 Sum_probs=172.0
Q ss_pred CCCCCCcccccCCeeEEEEEe-CCCcEEEEEEeccCC--hhhHHHHHHHHHHHHhccCCcccceeeeeec--CCcEEEEE
Q 003158 512 NFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDE--EGEQMLVY 586 (843)
Q Consensus 512 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~--~~~~~lV~ 586 (843)
+|++.+.||.|+||.||+|.. .+++.||+|.+.... ....+++.+|+++++.++|+||+++++++.. ....+++|
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVM 80 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEe
Confidence 477889999999999999985 468899999987532 3335678899999999999999999998753 45679999
Q ss_pred ecCCCCCHHHHHhhc--CCCCcchhHHHHHHHHHHHHHHHHh-----cCCCCCEEeccCCCCcEEEcCCCcEEEeecccc
Q 003158 587 EFMSNGTLRDQLSAK--SKEPLGFAMRLSIALGSSRGILYLH-----TEADPPVFHRDIKASNILLDHKFTAKVADFGLS 659 (843)
Q Consensus 587 e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~ia~aL~yLH-----~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla 659 (843)
||+++++|.+++... ...++++..++.++.|+++||.||| +.+ ++|+||||+||++++++.+||+|||++
T Consensus 81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~---i~h~dl~p~nili~~~~~~kl~d~g~~ 157 (265)
T cd08217 81 EYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNT---VLHRDLKPANIFLDANNNVKLGDFGLA 157 (265)
T ss_pred hhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCc---ceecCCCHHHEEEecCCCEEEeccccc
Confidence 999999999999653 2456899999999999999999999 666 999999999999999999999999999
Q ss_pred ccCCCCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCc
Q 003158 660 RLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 723 (843)
Q Consensus 660 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~ 723 (843)
....... .......+++.|+|||.+.+..++.++||||||+++|+|++|+.||....
T Consensus 158 ~~~~~~~-------~~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~ 214 (265)
T cd08217 158 KILGHDS-------SFAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARN 214 (265)
T ss_pred ccccCCc-------ccccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcC
Confidence 8764322 11223468899999999999889999999999999999999999997543
No 318
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=100.00 E-value=3.9e-35 Score=318.40 Aligned_cols=288 Identities=26% Similarity=0.360 Sum_probs=203.6
Q ss_pred HcCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCChh--hHHHHHHHHHHHHhccCCcccceeeeeecC-------
Q 003158 510 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ--GEKEFLTEIQFLSRLHHRNLVSLVGYCDEE------- 579 (843)
Q Consensus 510 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~------- 579 (843)
.++|++.+.||+|+||.||+|... +++.||+|++...... ....+.+|+++++.++|+||+++++++.+.
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 86 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRK 86 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccccc
Confidence 478999999999999999999965 6899999988643322 234678899999999999999999987443
Q ss_pred -CcEEEEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccc
Q 003158 580 -GEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGL 658 (843)
Q Consensus 580 -~~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGl 658 (843)
...++||||+. +++...+... ...+++..++.++.|+++||+|||+++ |+||||||+||++++++.+||+|||+
T Consensus 87 ~~~~~lv~~~~~-~~l~~~~~~~-~~~~~~~~~~~i~~~l~~al~~lH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~ 161 (311)
T cd07866 87 RGSVYMVTPYMD-HDLSGLLENP-SVKLTESQIKCYMLQLLEGINYLHENH---ILHRDIKAANILIDNQGILKIADFGL 161 (311)
T ss_pred CceEEEEEecCC-cCHHHHHhcc-ccCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCCEEECcCcc
Confidence 34699999996 5777777543 335899999999999999999999999 99999999999999999999999999
Q ss_pred cccCCCCCCCCcc----cceeeeeecccCCccCchhccc-CCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHh
Q 003158 659 SRLAPVPDIEGIV----PAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAY 733 (843)
Q Consensus 659 a~~~~~~~~~~~~----~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~ 733 (843)
++........... .....+...+++.|+|||.+.+ ..++.++|||||||++|||++|+.||...... ......+
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~-~~~~~~~ 240 (311)
T cd07866 162 ARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDI-DQLHLIF 240 (311)
T ss_pred chhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHH
Confidence 9765432211110 1112234567889999998875 45789999999999999999999998754432 2111111
Q ss_pred hcccchhhccCCCCCCCHHHHHHHHHHHHHh-cccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCC
Q 003158 734 QSSMMFSVIDGNMGSYPSECVEKFIKLALKC-CQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPP 812 (843)
Q Consensus 734 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c-~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~ 812 (843)
... ...++...+....+.... +...+...+...+ .+........+|+.+||..||++||
T Consensus 241 ------~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~i~~~l~~~p~~R~ 300 (311)
T cd07866 241 ------KLC----GTPTEETWPGWRSLPGCEGVHSFTNYPRTLEE----------RFGKLGPEGLDLLSKLLSLDPYKRL 300 (311)
T ss_pred ------HHh----CCCChhhchhhhhcccccccccCCCCCccHHH----------HcccCChhHHHHHHHHcccCcccCc
Confidence 000 000000000000000000 0001111111111 1223335567899999999999999
Q ss_pred CCccCCCCCcc
Q 003158 813 SSSSMLKHPYV 823 (843)
Q Consensus 813 sa~e~L~Hp~f 823 (843)
|+.|++.||||
T Consensus 301 t~~ell~~~~f 311 (311)
T cd07866 301 TASDALEHPYF 311 (311)
T ss_pred CHHHHhcCCCC
Confidence 99999999998
No 319
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=100.00 E-value=6.7e-35 Score=321.18 Aligned_cols=282 Identities=21% Similarity=0.339 Sum_probs=208.1
Q ss_pred HHHHHHHcCCCCCCcccccCCeeEEEEEe-CCCcEEEEEEeccCC--hhhHHHHHHHHHHHHhccCCcccceeeeeecC-
Q 003158 504 GEMALATNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE- 579 (843)
Q Consensus 504 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~- 579 (843)
+++...+++|++.+.||+|+||.||+|.. .+++.||+|++.... ....+.+.+|++++++++|+||+++++++...
T Consensus 10 ~~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~~ 89 (345)
T cd07877 10 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPAR 89 (345)
T ss_pred HHHhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeeecc
Confidence 45556778999999999999999999985 578999999987532 22345688899999999999999999988543
Q ss_pred -----CcEEEEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEe
Q 003158 580 -----GEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVA 654 (843)
Q Consensus 580 -----~~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~ 654 (843)
...+++++++ +++|.+++... .+++..++.++.|+++||+|||+.+ |+||||||+||++++++.+||+
T Consensus 90 ~~~~~~~~~lv~~~~-~~~L~~~~~~~---~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIll~~~~~~kl~ 162 (345)
T cd07877 90 SLEEFNDVYLVTHLM-GADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKIL 162 (345)
T ss_pred cccccccEEEEehhc-ccCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCChHHEEEcCCCCEEEe
Confidence 3478888887 78999888543 4889999999999999999999999 9999999999999999999999
Q ss_pred eccccccCCCCCCCCcccceeeeeecccCCccCchhccc-CCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHh
Q 003158 655 DFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAY 733 (843)
Q Consensus 655 DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~ 733 (843)
|||+++.... ......++..|+|||.+.+ ..++.++|||||||++|||++|+.||....... ......
T Consensus 163 dfg~~~~~~~----------~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~-~~~~~~ 231 (345)
T cd07877 163 DFGLARHTDD----------EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID-QLKLIL 231 (345)
T ss_pred cccccccccc----------cccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHH
Confidence 9999875421 1123457889999999876 568889999999999999999999996543321 111110
Q ss_pred hcccchhhccCCCCCCCHHHHH----HHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCC
Q 003158 734 QSSMMFSVIDGNMGSYPSECVE----KFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEE 809 (843)
Q Consensus 734 ~~~~~~~~~~~~~~~~~~~~~~----~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~ 809 (843)
.. ....+..... ...+....++...|..+. . +.....++...+++.+||..||+
T Consensus 232 ~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~----------~~~~~~~~~~~~li~~~L~~dp~ 289 (345)
T cd07877 232 RL----------VGTPGAELLKKISSESARNYIQSLTQMPKMNF--A----------NVFIGANPLAVDLLEKMLVLDSD 289 (345)
T ss_pred HH----------hCCCCHHHHhhcccHhHHHHHHHhcccCCcch--h----------hhcCCCCHHHHHHHHHHcCCChh
Confidence 00 0001111111 111111122222222111 0 01112345567899999999999
Q ss_pred CCCCCccCCCCCcccC
Q 003158 810 TPPSSSSMLKHPYVSS 825 (843)
Q Consensus 810 ~R~sa~e~L~Hp~f~~ 825 (843)
+|+|+.|+++||||..
T Consensus 290 ~R~t~~e~l~h~~f~~ 305 (345)
T cd07877 290 KRITAAQALAHAYFAQ 305 (345)
T ss_pred hcCCHHHHhcChhhhh
Confidence 9999999999999975
No 320
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-35 Score=303.68 Aligned_cols=279 Identities=21% Similarity=0.358 Sum_probs=221.3
Q ss_pred HHHcCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCChhhHHH---HHHHHHHHHhc-cCCcccceeeeeecCCcE
Q 003158 508 LATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKE---FLTEIQFLSRL-HHRNLVSLVGYCDEEGEQ 582 (843)
Q Consensus 508 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~---~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~ 582 (843)
+...+|..+.+||+|+||+|-+|..+ +.+.+|||+++++......+ -+.|-++|... +-|.+++++.+|..-+.+
T Consensus 346 i~~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRL 425 (683)
T KOG0696|consen 346 IKATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRL 425 (683)
T ss_pred eeecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhhe
Confidence 34457888999999999999999865 46889999998764433222 24566677665 578999999999999999
Q ss_pred EEEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccC
Q 003158 583 MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLA 662 (843)
Q Consensus 583 ~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~ 662 (843)
|+||||+.||+|-..+++-++ +.+..+..+|..||-||-+||+++ ||.||||.+|||+|.+|.+||+|||+++.-
T Consensus 426 yFVMEyvnGGDLMyhiQQ~Gk--FKEp~AvFYAaEiaigLFFLh~kg---IiYRDLKLDNvmLd~eGHiKi~DFGmcKEn 500 (683)
T KOG0696|consen 426 YFVMEYVNGGDLMYHIQQVGK--FKEPVAVFYAAEIAIGLFFLHSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKEN 500 (683)
T ss_pred eeEEEEecCchhhhHHHHhcc--cCCchhhhhhHHHHHHhhhhhcCC---eeeeeccccceEeccCCceEeeeccccccc
Confidence 999999999999999976543 778888899999999999999999 999999999999999999999999999743
Q ss_pred CCCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhc
Q 003158 663 PVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVI 742 (843)
Q Consensus 663 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 742 (843)
......+....||+.|+|||++...+|+.++|+|||||+||||+.|+.||+..+. .+ + +..+
T Consensus 501 -------i~~~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE-~e-l---------F~aI 562 (683)
T KOG0696|consen 501 -------IFDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDE-DE-L---------FQAI 562 (683)
T ss_pred -------ccCCcceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCH-HH-H---------HHHH
Confidence 2234556678999999999999999999999999999999999999999986542 11 1 1112
Q ss_pred cCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCCCCccCCCCCc
Q 003158 743 DGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPY 822 (843)
Q Consensus 743 ~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~sa~e~L~Hp~ 822 (843)
....-.+|...+.+...+....+.+.|.+|-... |+ ...++-.|||
T Consensus 563 ~ehnvsyPKslSkEAv~ickg~ltK~P~kRLGcg-------------------------------~~---ge~di~~H~F 608 (683)
T KOG0696|consen 563 MEHNVSYPKSLSKEAVAICKGLLTKHPGKRLGCG-------------------------------PE---GERDIREHPF 608 (683)
T ss_pred HHccCcCcccccHHHHHHHHHHhhcCCccccCCC-------------------------------Cc---cccchhhCcc
Confidence 2222345666666666666666666666553211 11 2257788999
Q ss_pred ccCCCCCCccccccCCCCCCC
Q 003158 823 VSSDVSGSNLVSGVIPTITPR 843 (843)
Q Consensus 823 f~~~~~~~~~~~~~~~~~~~~ 843 (843)
|+..++...-.++.-|+++|+
T Consensus 609 FR~iDWek~E~~eiqPPfkPk 629 (683)
T KOG0696|consen 609 FRRIDWEKLERREIQPPFKPK 629 (683)
T ss_pred hhhccHHHHhhccCCCCCCCc
Confidence 999999988888999999985
No 321
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=100.00 E-value=2.5e-34 Score=305.26 Aligned_cols=251 Identities=20% Similarity=0.361 Sum_probs=201.8
Q ss_pred CCCCCCcccccCCeeEEEEEeCC--CcEEEEEEeccCC----------hhhHHHHHHHHHHHHh-ccCCcccceeeeeec
Q 003158 512 NFNSSTQIGQGGYGKVYKGILPD--GTVVAVKRAQEGS----------LQGEKEFLTEIQFLSR-LHHRNLVSLVGYCDE 578 (843)
Q Consensus 512 ~~~~~~~lg~G~~g~Vy~~~~~~--~~~vavK~~~~~~----------~~~~~~~~~E~~~l~~-l~h~nIv~l~~~~~~ 578 (843)
.|++.+.||+|+||.||+|.... ++.+|+|.+.... .....++.+|+.++.+ ++||||+++++++.+
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 80 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE 80 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence 47788999999999999999754 7889999875321 1223457788888865 799999999999999
Q ss_pred CCcEEEEEecCCCCCHHHHHhh--cCCCCcchhHHHHHHHHHHHHHHHHhc-CCCCCEEeccCCCCcEEEcCCCcEEEee
Q 003158 579 EGEQMLVYEFMSNGTLRDQLSA--KSKEPLGFAMRLSIALGSSRGILYLHT-EADPPVFHRDIKASNILLDHKFTAKVAD 655 (843)
Q Consensus 579 ~~~~~lV~e~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~~ia~aL~yLH~-~~~~~iiH~Dlkp~NILl~~~~~~kl~D 655 (843)
++..++||||+++++|.+++.. .....+++..++.++.|++.||.|||+ .+ ++|+||||+||++++++.+||+|
T Consensus 81 ~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~---i~H~dl~~~nil~~~~~~~~l~d 157 (269)
T cd08528 81 NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKR---IVHRDLTPNNIMLGEDDKVTITD 157 (269)
T ss_pred CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCc---eeecCCCHHHEEECCCCcEEEec
Confidence 9999999999999999998854 234468889999999999999999996 56 99999999999999999999999
Q ss_pred ccccccCCCCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhc
Q 003158 656 FGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQS 735 (843)
Q Consensus 656 fGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~ 735 (843)
||.+....... ......|+..|+|||.+.+..++.++||||||+++|||++|+.||...... .....
T Consensus 158 fg~~~~~~~~~--------~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~-~~~~~---- 224 (269)
T cd08528 158 FGLAKQKQPES--------KLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNML-SLATK---- 224 (269)
T ss_pred ccceeeccccc--------ccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCHH-HHHHH----
Confidence 99997654221 223456888999999999988999999999999999999999999654322 11111
Q ss_pred ccchhhccCCCCCCC-HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 003158 736 SMMFSVIDGNMGSYP-SECVEKFIKLALKCCQDETDARPSMSEVMRELE 783 (843)
Q Consensus 736 ~~~~~~~~~~~~~~~-~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~ 783 (843)
+..+...+.+ ..++..+.+++.+||+.+|++||++.++..+++
T Consensus 225 -----~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~ 268 (269)
T cd08528 225 -----IVEAVYEPLPEGMYSEDVTDVITSCLTPDAEARPDIIQVSAMIS 268 (269)
T ss_pred -----HhhccCCcCCcccCCHHHHHHHHHHCCCCCccCCCHHHHHHHhc
Confidence 1111111222 245678899999999999999999999998765
No 322
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=100.00 E-value=4.8e-35 Score=322.02 Aligned_cols=281 Identities=23% Similarity=0.365 Sum_probs=203.4
Q ss_pred HcCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCC--hhhHHHHHHHHHHHHhccCCcccceeeeeecC------C
Q 003158 510 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE------G 580 (843)
Q Consensus 510 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~------~ 580 (843)
.++|...+.||+|+||.||+|... +|+.||+|++.... ......+.+|+++++.++|+||+++++++... .
T Consensus 14 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 93 (342)
T cd07879 14 PERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQ 93 (342)
T ss_pred ccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCc
Confidence 368999999999999999999964 68999999987532 12235678999999999999999999998654 3
Q ss_pred cEEEEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccc
Q 003158 581 EQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSR 660 (843)
Q Consensus 581 ~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~ 660 (843)
..++|+||+. .+|.++.. ..+++..+..++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||+++
T Consensus 94 ~~~lv~e~~~-~~l~~~~~----~~~~~~~~~~~~~qi~~aL~~LH~~~---i~H~dlkp~NIll~~~~~~kL~dfg~~~ 165 (342)
T cd07879 94 DFYLVMPYMQ-TDLQKIMG----HPLSEDKVQYLVYQMLCGLKYIHSAG---IIHRDLKPGNLAVNEDCELKILDFGLAR 165 (342)
T ss_pred eEEEEecccc-cCHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEeeCCCCc
Confidence 4699999995 47777652 34788999999999999999999999 9999999999999999999999999987
Q ss_pred cCCCCCCCCcccceeeeeecccCCccCchhccc-CCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccch
Q 003158 661 LAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMF 739 (843)
Q Consensus 661 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~ 739 (843)
..... .....++..|+|||.+.+ ..++.++|||||||++|||++|+.||...... ........
T Consensus 166 ~~~~~----------~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~-~~~~~~~~----- 229 (342)
T cd07879 166 HADAE----------MTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYL-DQLTQILK----- 229 (342)
T ss_pred CCCCC----------CCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHH-----
Confidence 54321 122356788999999876 46889999999999999999999999754422 21211110
Q ss_pred hhccCCCCCCCHHHHHHHHHHHH-HhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCCCCccCC
Q 003158 740 SVIDGNMGSYPSECVEKFIKLAL-KCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSML 818 (843)
Q Consensus 740 ~~~~~~~~~~~~~~~~~l~~l~~-~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~sa~e~L 818 (843)
. .+.......+.+..... ......| ..|. ..+...++..+....+|+.+||+.||++|++++|++
T Consensus 230 ----~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--------~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l 295 (342)
T cd07879 230 ----V-TGVPGPEFVQKLEDKAAKSYIKSLP-KYPR--------KDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEAL 295 (342)
T ss_pred ----h-cCCCCHHHHHHhcccchHHHHhhcC-Cccc--------chHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHh
Confidence 0 01111222111111000 0000000 0000 011112234455567899999999999999999999
Q ss_pred CCCcccCCCC
Q 003158 819 KHPYVSSDVS 828 (843)
Q Consensus 819 ~Hp~f~~~~~ 828 (843)
.||||..-..
T Consensus 296 ~h~~f~~~~~ 305 (342)
T cd07879 296 EHPYFDSFRD 305 (342)
T ss_pred cCcchhhccc
Confidence 9999976543
No 323
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=100.00 E-value=1.7e-34 Score=310.37 Aligned_cols=210 Identities=30% Similarity=0.446 Sum_probs=174.0
Q ss_pred HHHHHHHHcCCCCCCcccccCCeeEEEEEe-CCCcEEEEEEeccCChhhHHHHHHHHHHHHhc-cCCcccceeeeeecC-
Q 003158 503 YGEMALATNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEE- 579 (843)
Q Consensus 503 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~- 579 (843)
.+++..++++|++.+.||+|+||.||+|.. .+++.+|+|++.... ....++.+|+.+++++ +|||++++++++...
T Consensus 14 ~~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~ 92 (291)
T cd06639 14 LESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS-DVDEEIEAEYNILQSLPNHPNVVKFYGMFYKAD 92 (291)
T ss_pred cccCCCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc-cHHHHHHHHHHHHHHhcCCCCeEEEEEEEEecc
Confidence 344445678999999999999999999996 468999999987532 2345678899999998 799999999998643
Q ss_pred ----CcEEEEEecCCCCCHHHHHhhc--CCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEE
Q 003158 580 ----GEQMLVYEFMSNGTLRDQLSAK--SKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKV 653 (843)
Q Consensus 580 ----~~~~lV~e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl 653 (843)
+..++||||+++|+|.++++.. ....+++..++.++.|++.||+|||+.+ ++||||||+||++++++.+||
T Consensus 93 ~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~dlkp~nili~~~~~~kl 169 (291)
T cd06639 93 KLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNR---IIHRDVKGNNILLTTEGGVKL 169 (291)
T ss_pred ccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHEEEcCCCCEEE
Confidence 3589999999999999988642 3346889999999999999999999998 999999999999999999999
Q ss_pred eeccccccCCCCCCCCcccceeeeeecccCCccCchhcccC-----CCCchhhhHHHHHHHHHHHhCCCCCCCCc
Q 003158 654 ADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTH-----KLTDKSDVYSLGVVFLELLTGMQPISHGK 723 (843)
Q Consensus 654 ~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~sDvwS~G~~l~elltg~~pf~~~~ 723 (843)
+|||++....... .......|+..|+|||.+... .++.++|||||||++|||++|+.||....
T Consensus 170 ~dfg~~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~ 237 (291)
T cd06639 170 VDFGVSAQLTSTR-------LRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMH 237 (291)
T ss_pred eecccchhccccc-------ccccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCc
Confidence 9999987654221 111234578899999998643 36789999999999999999999997543
No 324
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=100.00 E-value=2.5e-34 Score=304.26 Aligned_cols=203 Identities=32% Similarity=0.468 Sum_probs=174.5
Q ss_pred CCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCChh--hHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEEec
Q 003158 512 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ--GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 588 (843)
Q Consensus 512 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e~ 588 (843)
+|+..+.||+|+||.||+|... +++.||+|.++..... ..+.+.+|+++++.++|+||+++++++...+..++|+||
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEY 80 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEec
Confidence 5788899999999999999964 7899999998765443 467889999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCCC
Q 003158 589 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 668 (843)
Q Consensus 589 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 668 (843)
+++++|.+++... ..+++..++.++.|+++||+|||+.+ |+|+||+|+||++++++.+||+|||++.........
T Consensus 81 ~~~~~L~~~~~~~--~~~~~~~~~~i~~~i~~~l~~lh~~~---i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~~ 155 (264)
T cd06626 81 CSGGTLEELLEHG--RILDEHVIRVYTLQLLEGLAYLHSHG---IVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTT 155 (264)
T ss_pred CCCCcHHHHHhhc--CCCChHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEcccccccccCCCCCc
Confidence 9999999999754 34788889999999999999999999 999999999999999999999999999876433211
Q ss_pred CcccceeeeeecccCCccCchhcccCC---CCchhhhHHHHHHHHHHHhCCCCCCCC
Q 003158 669 GIVPAHVSTVVKGTPGYLDPEYFLTHK---LTDKSDVYSLGVVFLELLTGMQPISHG 722 (843)
Q Consensus 669 ~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~~sDvwS~G~~l~elltg~~pf~~~ 722 (843)
. ........++..|+|||++.+.. ++.++||||||+++||+++|+.||...
T Consensus 156 ~---~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~ 209 (264)
T cd06626 156 M---GEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSEL 209 (264)
T ss_pred c---cccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCC
Confidence 0 11012345788999999998766 889999999999999999999999654
No 325
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=100.00 E-value=8.2e-35 Score=307.79 Aligned_cols=255 Identities=24% Similarity=0.368 Sum_probs=197.8
Q ss_pred ccccCCeeEEEEEeC-CCcEEEEEEeccCCh---hhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEEecCCCCCH
Q 003158 519 IGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTL 594 (843)
Q Consensus 519 lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e~~~~gsL 594 (843)
||+|+||.||++... +|+.||+|.+..... ...+.+.+|++++++++|+||+++++.+...+..++||||+++++|
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL 80 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence 689999999999976 499999999875443 3456788999999999999999999999999999999999999999
Q ss_pred HHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCCCC-cccc
Q 003158 595 RDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEG-IVPA 673 (843)
Q Consensus 595 ~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~-~~~~ 673 (843)
.+++.... .+++..+..++.|+++||+|||+.+ ++||||+|+||++++++.++|+|||++.......... ....
T Consensus 81 ~~~l~~~~--~~~~~~~~~i~~qi~~~L~~lH~~~---i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~ 155 (265)
T cd05579 81 ASLLENVG--SLDEDVARIYIAEIVLALEYLHSNG---IIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDDE 155 (265)
T ss_pred HHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHcC---eecCCCCHHHeEEcCCCCEEEEecccchhcccCccccccccc
Confidence 99997644 5889999999999999999999998 9999999999999999999999999987643321100 0001
Q ss_pred eeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhccCCCCCCCHHH
Q 003158 674 HVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSEC 753 (843)
Q Consensus 674 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 753 (843)
.......++..|+|||......++.++||||||+++||+++|+.||...... ....
T Consensus 156 ~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~-~~~~----------------------- 211 (265)
T cd05579 156 KEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPE-EIFQ----------------------- 211 (265)
T ss_pred ccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHH-HHHH-----------------------
Confidence 1223455788999999999888999999999999999999999999654321 0000
Q ss_pred HHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCCCC---ccCCCCCcccCC
Q 003158 754 VEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSS---SSMLKHPYVSSD 826 (843)
Q Consensus 754 ~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~sa---~e~L~Hp~f~~~ 826 (843)
.+.. ....+|... .......+++.+|+..+|++|||+ .|+|+||||+..
T Consensus 212 -----~~~~-----~~~~~~~~~--------------~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~~~~~~~~ 263 (265)
T cd05579 212 -----NILN-----GKIEWPEDV--------------EVSDEAIDLISKLLVPDPEKRLGAKSIEEIKNHPFFKGI 263 (265)
T ss_pred -----HHhc-----CCcCCCccc--------------cCCHHHHHHHHHHhcCCHhhcCCCccHHHHhcCccccCC
Confidence 0000 000011000 012233467778888889999999 899999999854
No 326
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=100.00 E-value=2e-34 Score=310.56 Aligned_cols=195 Identities=26% Similarity=0.394 Sum_probs=170.2
Q ss_pred CCcccccCCeeEEEEEeC-CCcEEEEEEeccCChhhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEEecCCCCCH
Q 003158 516 STQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTL 594 (843)
Q Consensus 516 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e~~~~gsL 594 (843)
...||+|+||.||+|... +++.||+|.+........+.+.+|+.+++.++||||+++++++..++..++||||+++++|
T Consensus 26 ~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~~~~~L 105 (297)
T cd06659 26 YIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQGGAL 105 (297)
T ss_pred hhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecCCCCCH
Confidence 457999999999999964 6899999998765445566788999999999999999999999999999999999999999
Q ss_pred HHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCCCCcccce
Q 003158 595 RDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAH 674 (843)
Q Consensus 595 ~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~ 674 (843)
.+++.. ..+++..++.++.|++.||+|||+.+ ++||||||+||+++.++.+||+|||++....... .
T Consensus 106 ~~~~~~---~~~~~~~~~~~~~qi~~~L~~LH~~~---ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~-------~ 172 (297)
T cd06659 106 TDIVSQ---TRLNEEQIATVCESVLQALCYLHSQG---VIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDV-------P 172 (297)
T ss_pred HHHHhh---cCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHeEEccCCcEEEeechhHhhccccc-------c
Confidence 998754 34788999999999999999999998 9999999999999999999999999987543211 1
Q ss_pred eeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCc
Q 003158 675 VSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 723 (843)
Q Consensus 675 ~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~ 723 (843)
......|+..|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 173 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~ 221 (297)
T cd06659 173 KRKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDS 221 (297)
T ss_pred cccceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 1233568899999999999899999999999999999999999997543
No 327
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=100.00 E-value=9.1e-35 Score=310.86 Aligned_cols=276 Identities=24% Similarity=0.354 Sum_probs=198.9
Q ss_pred CCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCCh-hhHHHHHHHHHHHHhcc-CCcccceeeeeecC--CcEEEEEe
Q 003158 513 FNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLH-HRNLVSLVGYCDEE--GEQMLVYE 587 (843)
Q Consensus 513 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~-h~nIv~l~~~~~~~--~~~~lV~e 587 (843)
|++.+.||+|+||.||+|... +++.||+|+++.... .......+|+.+++++. |+||+++++++.+. +..++|||
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e 80 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFE 80 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEe
Confidence 567789999999999999964 689999999875322 22334567899999885 99999999999877 89999999
Q ss_pred cCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCC
Q 003158 588 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 667 (843)
Q Consensus 588 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~ 667 (843)
|++ |+|.+.+.... ..+++..++.++.|+++||+|||+.+ ++||||||+||++++ +.+||+|||+++......
T Consensus 81 ~~~-~~l~~~l~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~~---i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~~- 153 (282)
T cd07831 81 LMD-MNLYELIKGRK-RPLPEKRVKSYMYQLLKSLDHMHRNG---IFHRDIKPENILIKD-DILKLADFGSCRGIYSKP- 153 (282)
T ss_pred cCC-ccHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCC---ceecccCHHHEEEcC-CCeEEEecccccccccCC-
Confidence 996 58888886543 46899999999999999999999998 999999999999999 999999999998654221
Q ss_pred CCcccceeeeeecccCCccCchhccc-CCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhccCCC
Q 003158 668 EGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNM 746 (843)
Q Consensus 668 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 746 (843)
......++..|+|||.+.. ..++.++|||||||++|||++|+.||...+.. +.+.... . ..
T Consensus 154 -------~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~-~~~~~~~------~----~~ 215 (282)
T cd07831 154 -------PYTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNEL-DQIAKIH------D----VL 215 (282)
T ss_pred -------CcCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHH-HHHHHHH------H----Hc
Confidence 1122357889999998754 55788999999999999999999999654432 1111110 0 01
Q ss_pred CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCCCCccCCCCCcc
Q 003158 747 GSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYV 823 (843)
Q Consensus 747 ~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~sa~e~L~Hp~f 823 (843)
+..+......+..- ...-...|..-+. .+....+.......+++.+||..||++|||++|+++||||
T Consensus 216 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~~~~ 282 (282)
T cd07831 216 GTPDAEVLKKFRKS-RHMNYNFPSKKGT---------GLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALRHPYF 282 (282)
T ss_pred CCCCHHHHHhhccc-ccccccCcccccc---------cHHHHcccccHHHHHHHHHHhccCcccccCHHHHhhCCCC
Confidence 11122121110000 0000000100000 0111122335566789999999999999999999999998
No 328
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.8e-35 Score=307.92 Aligned_cols=292 Identities=21% Similarity=0.290 Sum_probs=208.8
Q ss_pred HcCCCCCCcccccCCeeEEEEEe-CCCcEEEEEEeccCChhhHHHHHHHHHHHHhcc-----C---Ccccceeeeeec--
Q 003158 510 TNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLH-----H---RNLVSLVGYCDE-- 578 (843)
Q Consensus 510 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----h---~nIv~l~~~~~~-- 578 (843)
..+|.+.++||.|.|++||+|.+ .+.+.||+|+.+.. ....+....||++|++++ | .+||+|+++|..
T Consensus 77 ~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSA-qhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsG 155 (590)
T KOG1290|consen 77 GGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSA-QHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSG 155 (590)
T ss_pred CceEEEEEeccccccceeEEEeeccCCeEEEEEEEehh-hHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecC
Confidence 47899999999999999999995 57899999999853 233456788999999984 2 379999999965
Q ss_pred --CCcEEEEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCC--------
Q 003158 579 --EGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHK-------- 648 (843)
Q Consensus 579 --~~~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~-------- 648 (843)
+.+.|+|+|++ |.+|..+|....-..++...+++|++||+.||.|||+++ +|||.||||+|||+...
T Consensus 156 pNG~HVCMVfEvL-GdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~ec--gIIHTDlKPENvLl~~~e~~~~~~~ 232 (590)
T KOG1290|consen 156 PNGQHVCMVFEVL-GDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHREC--GIIHTDLKPENVLLCSTEIDPAKDA 232 (590)
T ss_pred CCCcEEEEEehhh-hhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHhc--CccccCCCcceeeeeccccchhhhh
Confidence 45899999999 789999998877777999999999999999999999987 49999999999999110
Q ss_pred --------------------------------------------------------------------------------
Q 003158 649 -------------------------------------------------------------------------------- 648 (843)
Q Consensus 649 -------------------------------------------------------------------------------- 648 (843)
T Consensus 233 ~~a~e~~~~~p~~s~s~~~t~~d~~~~~~~~~~s~~~~k~~~kk~~r~~~~~~~~l~~~~~~~~~~~~~s~n~~~~~n~~ 312 (590)
T KOG1290|consen 233 REAGEATTSLPKMSPSAVSTRPDALQRMAAEPMSKSKFKKMKKKLKRQAKKLEASLAGLEGIEEEPNQESYNNEPRINGN 312 (590)
T ss_pred hhhccccccCCCCCcccccccccccchhhccccchhhHHHHHHHHhhhhhhhhhhhcccccccccccccccccccCCCcc
Confidence
Q ss_pred ------------------------------------------------------------------------------Cc
Q 003158 649 ------------------------------------------------------------------------------FT 650 (843)
Q Consensus 649 ------------------------------------------------------------------------------~~ 650 (843)
.+
T Consensus 313 ~~~v~~~~~~~~~~~~~~~~n~~~k~~e~~~~~~~sl~~~~~~~~~t~~~~~~~s~~s~~~~~~n~~v~p~~~~~~~di~ 392 (590)
T KOG1290|consen 313 ESTVERSTLEEDSNENGNRENLPIKSPENFRGNNTSLPESQLRDSATPSDGSLSSPSSPGTIASNPLVNPDIPLPECDIR 392 (590)
T ss_pred ccchhhcccccccccccCCccccccCccccccccccccchhcccccccccccccCcCCccccccccccCCCCCCCcccee
Confidence 01
Q ss_pred EEEeeccccccCCCCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCcc--h-HH
Q 003158 651 AKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKN--I-VR 727 (843)
Q Consensus 651 ~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~--~-~~ 727 (843)
+||+|||-|+... ...+.-..|..|+|||++.+..|++.+||||++|+++||.||...|++... . .+
T Consensus 393 vKIaDlGNACW~~----------khFT~DIQTRQYRapEVllGsgY~~~ADiWS~AC~~FELaTGDyLFePhsG~~Y~rD 462 (590)
T KOG1290|consen 393 VKIADLGNACWVH----------KHFTEDIQTRQYRAPEVLLGSGYSTSADIWSTACMAFELATGDYLFEPHSGENYSRD 462 (590)
T ss_pred EEEeeccchhhhh----------hhhchhhhhhhccCcceeecCCCCCchhHHHHHHHHHHhhcCceeecCCCCCCCCcc
Confidence 3334444433321 112334578899999999999999999999999999999999999975321 1 11
Q ss_pred HHHHHhhcccchhhccCCCCCCCHH------HHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCcccc
Q 003158 728 EVNIAYQSSMMFSVIDGNMGSYPSE------CVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFIN 801 (843)
Q Consensus 728 ~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~ 801 (843)
....+... ++ ++..|.. .+.++..--... .. -.|-.+--+.+.|.+.++...+.+.++.|||.
T Consensus 463 EDHiA~i~----EL----LG~iPr~ia~~Gk~SRdFFnr~G~L-rh--I~~LK~WpL~~VL~eKY~~s~e~A~~fsdFL~ 531 (590)
T KOG1290|consen 463 EDHIALIM----EL----LGKIPRKIALGGKYSRDFFNRRGEL-RH--IRRLKPWPLYEVLIEKYEWSEEDAQQFSDFLS 531 (590)
T ss_pred HHHHHHHH----HH----HhhccHHHHhcCcchHhhhccccce-ec--ccccCCCcHHHHHHHHhCCCHHHHHHHHHHHH
Confidence 11111111 11 1111211 111111110000 00 01222222334455555555566778889999
Q ss_pred CCCCCCCCCCCCCccCCCCCcccCC
Q 003158 802 SEHTSKEETPPSSSSMLKHPYVSSD 826 (843)
Q Consensus 802 ~~L~~dp~~R~sa~e~L~Hp~f~~~ 826 (843)
.||+++|++|+||.++|+|||+...
T Consensus 532 PmLef~PeKR~tA~~cl~hPwLn~~ 556 (590)
T KOG1290|consen 532 PMLEFDPEKRPTAAQCLKHPWLNPV 556 (590)
T ss_pred HHHhcCccccccHHHHhcCccccCC
Confidence 9999999999999999999999863
No 329
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=100.00 E-value=1.6e-34 Score=304.45 Aligned_cols=201 Identities=27% Similarity=0.464 Sum_probs=173.7
Q ss_pred CCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCC--hhhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEEec
Q 003158 512 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 588 (843)
Q Consensus 512 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e~ 588 (843)
+|+..+.||+|+||.||+|... +|..||+|.+.... ....+.+.+|+++++.++|+||+++++++.+.+..++|+||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~ 80 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEY 80 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEec
Confidence 4778899999999999999975 58899999986532 22345788999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCC-cEEEeeccccccCCCCCC
Q 003158 589 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKF-TAKVADFGLSRLAPVPDI 667 (843)
Q Consensus 589 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~-~~kl~DfGla~~~~~~~~ 667 (843)
+++++|.+++.......+++..++.++.|+++||.|||+.+ ++|+||||+||++++++ .+||+|||.+.......
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~---i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~- 156 (257)
T cd08225 81 CDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRK---ILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSM- 156 (257)
T ss_pred CCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccccCCHHHEEEcCCCCeEEecccccchhccCCc-
Confidence 99999999997765556899999999999999999999998 99999999999999886 56999999987654221
Q ss_pred CCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCC
Q 003158 668 EGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 722 (843)
Q Consensus 668 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~ 722 (843)
.......|++.|+|||+..+..++.++||||||+++|||++|+.||...
T Consensus 157 ------~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~ 205 (257)
T cd08225 157 ------ELAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGN 205 (257)
T ss_pred ------ccccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCc
Confidence 1122345889999999998888999999999999999999999998643
No 330
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=5.3e-35 Score=310.03 Aligned_cols=203 Identities=25% Similarity=0.357 Sum_probs=171.9
Q ss_pred HcCCCCCCcccccCCeeEEEEEeCCCcEEEEEEeccC--ChhhHHHHHHHHHHHHhcc-CCcccceeeeeecCCcEEEEE
Q 003158 510 TNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEG--SLQGEKEFLTEIQFLSRLH-HRNLVSLVGYCDEEGEQMLVY 586 (843)
Q Consensus 510 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~-h~nIv~l~~~~~~~~~~~lV~ 586 (843)
...|++.+.||+||.++||++...+.+.+|+|++... ..+....|..|+..|.+++ |.+|+++++|-..++.+|+||
T Consensus 360 g~~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmvm 439 (677)
T KOG0596|consen 360 GREYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMVM 439 (677)
T ss_pred cchhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEEe
Confidence 4578889999999999999999888888998876542 3334578999999999995 999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCC
Q 003158 587 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 666 (843)
Q Consensus 587 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~ 666 (843)
||- ..+|..+|+.+......| .++.+..||+.|+.++|.+| |||.||||.|.|+-+ |.+||+|||+|.....+.
T Consensus 440 E~G-d~DL~kiL~k~~~~~~~~-~lk~ywkqML~aV~~IH~~g---IVHSDLKPANFLlVk-G~LKLIDFGIA~aI~~DT 513 (677)
T KOG0596|consen 440 ECG-DIDLNKILKKKKSIDPDW-FLKFYWKQMLLAVKTIHQHG---IVHSDLKPANFLLVK-GRLKLIDFGIANAIQPDT 513 (677)
T ss_pred ecc-cccHHHHHHhccCCCchH-HHHHHHHHHHHHHHHHHHhc---eeecCCCcccEEEEe-eeEEeeeechhcccCccc
Confidence 987 469999998876665555 78889999999999999999 999999999998875 689999999998765432
Q ss_pred CCCcccceeeeeecccCCccCchhcccCC-----------CCchhhhHHHHHHHHHHHhCCCCCCCCc
Q 003158 667 IEGIVPAHVSTVVKGTPGYLDPEYFLTHK-----------LTDKSDVYSLGVVFLELLTGMQPISHGK 723 (843)
Q Consensus 667 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-----------~~~~sDvwS~G~~l~elltg~~pf~~~~ 723 (843)
..-.....+||+.||+||.+.... .+.++||||+||+||+|+.|+.||..-.
T Consensus 514 -----TsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~ 576 (677)
T KOG0596|consen 514 -----TSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQII 576 (677)
T ss_pred -----cceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHH
Confidence 123345568999999999996432 4568999999999999999999997544
No 331
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=100.00 E-value=3.7e-34 Score=303.68 Aligned_cols=203 Identities=25% Similarity=0.434 Sum_probs=172.4
Q ss_pred CCCCCCcccccCCeeEEEEEe-CCCcEEEEEEeccCCh------hhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEE
Q 003158 512 NFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSL------QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQML 584 (843)
Q Consensus 512 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~------~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~l 584 (843)
+|+..+.||+|++|.||+|.. .+++.||+|.+..... ...+.+.+|++++++++|+||+++++++.+.+..++
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 80 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNL 80 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEE
Confidence 477889999999999999995 5789999999874321 124678999999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCC-cEEEeeccccccCC
Q 003158 585 VYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKF-TAKVADFGLSRLAP 663 (843)
Q Consensus 585 V~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~-~~kl~DfGla~~~~ 663 (843)
||||+++++|.+++.... ++++..+..++.|++.||.|||+++ ++|+||||+||+++.++ .+||+|||.+....
T Consensus 81 v~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~ql~~al~~LH~~~---i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~ 155 (268)
T cd06630 81 FVEWMAGGSVSHLLSKYG--AFKEAVIINYTEQLLRGLSYLHENQ---IIHRDVKGANLLIDSTGQRLRIADFGAAARLA 155 (268)
T ss_pred EEeccCCCcHHHHHHHhC--CCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEEcccccccccc
Confidence 999999999999997543 5788999999999999999999998 99999999999998776 69999999987664
Q ss_pred CCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCC
Q 003158 664 VPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 722 (843)
Q Consensus 664 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~ 722 (843)
...... ........++..|+|||.+.+..++.++||||+||++|+|++|..||...
T Consensus 156 ~~~~~~---~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~ 211 (268)
T cd06630 156 AKGTGA---GEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAE 211 (268)
T ss_pred cccccC---CccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCC
Confidence 321100 11122345788999999999888999999999999999999999999643
No 332
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=100.00 E-value=3.6e-34 Score=304.80 Aligned_cols=203 Identities=32% Similarity=0.452 Sum_probs=172.4
Q ss_pred HHcCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCChhhHHHHHHHHHHHHhc-cCCcccceeeeeecCC------
Q 003158 509 ATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEG------ 580 (843)
Q Consensus 509 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~------ 580 (843)
.+++|++.+.||+|+||.||+|... +++.+|+|++..... ..+++.+|+.+++++ +|+||+++++++....
T Consensus 4 ~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~ 82 (275)
T cd06608 4 PTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIED-EEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGNDD 82 (275)
T ss_pred chhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCch-hHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcce
Confidence 4678999999999999999999975 678999999875433 346789999999999 6999999999996544
Q ss_pred cEEEEEecCCCCCHHHHHhhcC--CCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccc
Q 003158 581 EQMLVYEFMSNGTLRDQLSAKS--KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGL 658 (843)
Q Consensus 581 ~~~lV~e~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGl 658 (843)
..++||||+++++|.+++.... ...+++..++.++.|+++||.|||+.+ ++|+||+|+||++++++.+||+|||.
T Consensus 83 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~---i~H~~l~p~ni~~~~~~~~~l~d~~~ 159 (275)
T cd06608 83 QLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENK---VIHRDIKGQNILLTKNAEVKLVDFGV 159 (275)
T ss_pred EEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCC---cccCCCCHHHEEEccCCeEEECCCcc
Confidence 4899999999999999987533 456899999999999999999999999 99999999999999999999999999
Q ss_pred cccCCCCCCCCcccceeeeeecccCCccCchhccc-----CCCCchhhhHHHHHHHHHHHhCCCCCCCC
Q 003158 659 SRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT-----HKLTDKSDVYSLGVVFLELLTGMQPISHG 722 (843)
Q Consensus 659 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~sDvwS~G~~l~elltg~~pf~~~ 722 (843)
+....... .......|+..|+|||++.. ..++.++|||||||++|||++|+.||...
T Consensus 160 ~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~ 221 (275)
T cd06608 160 SAQLDSTL-------GRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDM 221 (275)
T ss_pred ceecccch-------hhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCcccc
Confidence 87653211 11233458889999999864 34678899999999999999999999643
No 333
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=100.00 E-value=5.9e-35 Score=319.95 Aligned_cols=293 Identities=25% Similarity=0.360 Sum_probs=213.7
Q ss_pred CCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCC--hhhHHHHHHHHHHHHhccCCcccceeeeeecCC-----cEE
Q 003158 512 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEG-----EQM 583 (843)
Q Consensus 512 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~-----~~~ 583 (843)
+|++.+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|+++++.++|+||+++++++.... ..+
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVY 80 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceE
Confidence 5788899999999999999965 58999999987643 334568899999999999999999999997765 789
Q ss_pred EEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCC
Q 003158 584 LVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAP 663 (843)
Q Consensus 584 lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~ 663 (843)
+||||++ ++|.+++.... ++++..++.++.|+++||+|||+.+ |+||||||+||+++.++.++|+|||++....
T Consensus 81 lv~e~~~-~~l~~~l~~~~--~l~~~~~~~i~~~l~~~l~~LH~~g---i~H~dlkp~nili~~~~~~~L~dfg~~~~~~ 154 (330)
T cd07834 81 IVTELME-TDLHKVIKSPQ--PLTDDHIQYFLYQILRGLKYLHSAN---VIHRDLKPSNILVNSNCDLKICDFGLARGVD 154 (330)
T ss_pred EEecchh-hhHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEcccCceEeec
Confidence 9999997 58999886543 6899999999999999999999999 9999999999999999999999999998764
Q ss_pred CCCCCCcccceeeeeecccCCccCchhcccC-CCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhc
Q 003158 664 VPDIEGIVPAHVSTVVKGTPGYLDPEYFLTH-KLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVI 742 (843)
Q Consensus 664 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 742 (843)
..... ........++..|+|||.+.+. .++.++|||||||++|+|++|+.||...... .......
T Consensus 155 ~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~-~~~~~i~--------- 220 (330)
T cd07834 155 PDEDE----KGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYI-DQLNLIV--------- 220 (330)
T ss_pred ccccc----cccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHH-HHHHHHH---------
Confidence 33210 0112334578899999999887 7899999999999999999999999765432 1111110
Q ss_pred cCCCCCCCHHHHHHH-HHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCCCCccCCCCC
Q 003158 743 DGNMGSYPSECVEKF-IKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHP 821 (843)
Q Consensus 743 ~~~~~~~~~~~~~~l-~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~sa~e~L~Hp 821 (843)
...+..+.+..... ...+...+...+..++ . .+....+.....+.+++.+||..+|++|||++++++||
T Consensus 221 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--------~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~ 290 (330)
T cd07834 221 -EVLGTPSEEDLKFITSEKARNYLKSLPKKPK-K--------PLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHP 290 (330)
T ss_pred -HhcCCCChhHhhhccccchhhHHhhcccCCc-c--------hhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCc
Confidence 00111111111100 0000000000000000 0 01112233455567899999999999999999999999
Q ss_pred cccCCCCCCcccc
Q 003158 822 YVSSDVSGSNLVS 834 (843)
Q Consensus 822 ~f~~~~~~~~~~~ 834 (843)
||.+-...++-.+
T Consensus 291 ~~~~~~~~~~~~~ 303 (330)
T cd07834 291 YLAQLHDPEDEPV 303 (330)
T ss_pred cHHhhcccccCCC
Confidence 9977555443333
No 334
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=100.00 E-value=6.3e-34 Score=301.06 Aligned_cols=201 Identities=30% Similarity=0.429 Sum_probs=177.1
Q ss_pred cCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCCh-hhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEEec
Q 003158 511 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 588 (843)
Q Consensus 511 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e~ 588 (843)
++|++.+.||+|++|.||+|... +++.||+|++..... ...+.+.+|++++++++|+||+++++++...+..++||||
T Consensus 1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (264)
T cd06623 1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEY 80 (264)
T ss_pred CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEEe
Confidence 36888999999999999999976 599999999876543 3457899999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhc-CCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCC
Q 003158 589 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHT-EADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 667 (843)
Q Consensus 589 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~-~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~ 667 (843)
+++++|.+++... .++++..++.++.|+++|++|||+ .+ ++||||+|+||++++++.++|+|||.+........
T Consensus 81 ~~~~~L~~~l~~~--~~l~~~~~~~~~~~l~~~l~~lh~~~~---~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~~ 155 (264)
T cd06623 81 MDGGSLADLLKKV--GKIPEPVLAYIARQILKGLDYLHTKRH---IIHRDIKPSNLLINSKGEVKIADFGISKVLENTLD 155 (264)
T ss_pred cCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHhccCC---CccCCCCHHHEEECCCCCEEEccCccceecccCCC
Confidence 9999999999764 458899999999999999999999 88 99999999999999999999999999986543221
Q ss_pred CCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCc
Q 003158 668 EGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 723 (843)
Q Consensus 668 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~ 723 (843)
......++..|+|||.+.+..++.++||||||+++|||++|+.||....
T Consensus 156 -------~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~ 204 (264)
T cd06623 156 -------QCNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPG 204 (264)
T ss_pred -------cccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccc
Confidence 1123457889999999999999999999999999999999999997553
No 335
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=100.00 E-value=5.6e-34 Score=303.15 Aligned_cols=202 Identities=27% Similarity=0.455 Sum_probs=170.2
Q ss_pred CCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCChh----------hHHHHHHHHHHHHhccCCcccceeeeeecCC
Q 003158 512 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ----------GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEG 580 (843)
Q Consensus 512 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~----------~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~ 580 (843)
+|...+.||+|+||.||+|... +++.||+|.+...... ..+.+.+|+++++.++|+||+++++++...+
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 81 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEE 81 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCC
Confidence 4677889999999999999854 6899999987532111 1246788999999999999999999999999
Q ss_pred cEEEEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccc
Q 003158 581 EQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSR 660 (843)
Q Consensus 581 ~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~ 660 (843)
..++||||+++++|.+++... ..+++..+..++.|++.||.|||+.+ ++||||+|+||++++++.++|+|||+++
T Consensus 82 ~~~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~~~nil~~~~~~~~l~d~~~~~ 156 (272)
T cd06629 82 YLSIFLEYVPGGSIGSCLRTY--GRFEEQLVRFFTEQVLEGLAYLHSKG---ILHRDLKADNLLVDADGICKISDFGISK 156 (272)
T ss_pred ceEEEEecCCCCcHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHhhCC---eeecCCChhhEEEcCCCeEEEeeccccc
Confidence 999999999999999999765 35888899999999999999999998 9999999999999999999999999997
Q ss_pred cCCCCCCCCcccceeeeeecccCCccCchhcccCC--CCchhhhHHHHHHHHHHHhCCCCCCCCc
Q 003158 661 LAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHK--LTDKSDVYSLGVVFLELLTGMQPISHGK 723 (843)
Q Consensus 661 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~sDvwS~G~~l~elltg~~pf~~~~ 723 (843)
...... .........|+..|+|||.+.... ++.++||||||+++||+++|..||....
T Consensus 157 ~~~~~~-----~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~ 216 (272)
T cd06629 157 KSDDIY-----DNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEE 216 (272)
T ss_pred cccccc-----cccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcc
Confidence 643211 011123345888999999988654 7889999999999999999999996443
No 336
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=100.00 E-value=4.1e-34 Score=305.99 Aligned_cols=200 Identities=29% Similarity=0.424 Sum_probs=166.6
Q ss_pred cCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCCh-hhHHHHHHHHHH-HHhccCCcccceeeeeecCCcEEEEEe
Q 003158 511 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL-QGEKEFLTEIQF-LSRLHHRNLVSLVGYCDEEGEQMLVYE 587 (843)
Q Consensus 511 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~-l~~l~h~nIv~l~~~~~~~~~~~lV~e 587 (843)
++|++.+.||+|+||.||+|... +|+.||+|++..... ....++..|+.. ++..+||||+++++++..++..++|||
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e 80 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICME 80 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhh
Confidence 46888999999999999999965 699999999875432 334566667665 666789999999999999999999999
Q ss_pred cCCCCCHHHHHhhc--CCCCcchhHHHHHHHHHHHHHHHHhcC-CCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCC
Q 003158 588 FMSNGTLRDQLSAK--SKEPLGFAMRLSIALGSSRGILYLHTE-ADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPV 664 (843)
Q Consensus 588 ~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~ia~aL~yLH~~-~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~ 664 (843)
|++ |+|.+++... ....+++..++.++.||+.||+|||++ + ++||||||+||++++++.+||+|||++.....
T Consensus 81 ~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~---i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~ 156 (283)
T cd06617 81 VMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLS---VIHRDVKPSNVLINRNGQVKLCDFGISGYLVD 156 (283)
T ss_pred hhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCC---eecCCCCHHHEEECCCCCEEEeeccccccccc
Confidence 996 7898888652 234689999999999999999999987 7 99999999999999999999999999876532
Q ss_pred CCCCCcccceeeeeecccCCccCchhccc----CCCCchhhhHHHHHHHHHHHhCCCCCCCC
Q 003158 665 PDIEGIVPAHVSTVVKGTPGYLDPEYFLT----HKLTDKSDVYSLGVVFLELLTGMQPISHG 722 (843)
Q Consensus 665 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~sDvwS~G~~l~elltg~~pf~~~ 722 (843)
. .......++..|+|||.+.+ ..++.++|+|||||++|||++|+.||...
T Consensus 157 ~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~ 210 (283)
T cd06617 157 S--------VAKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSW 210 (283)
T ss_pred c--------cccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCcc
Confidence 1 11123457889999999865 45688999999999999999999999643
No 337
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=3.8e-36 Score=346.11 Aligned_cols=254 Identities=27% Similarity=0.390 Sum_probs=207.7
Q ss_pred HcCCCCCCcccccCCeeEEEEE-eCCCcEEEEEEeccCC--hhhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEE
Q 003158 510 TNNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 586 (843)
Q Consensus 510 ~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~ 586 (843)
+-+++....||.|.||.||.|. .++|...|+|-++... ....+.+.+|+.++..++|||+|+++|+-.+.+..+|.|
T Consensus 1234 ~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~IFM 1313 (1509)
T KOG4645|consen 1234 TFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYIFM 1313 (1509)
T ss_pred eeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHHHHHH
Confidence 4577778999999999999999 5679999999776432 223467789999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCC
Q 003158 587 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 666 (843)
Q Consensus 587 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~ 666 (843)
|||++|+|.++++..+ ..++.....+..|++.|++|||++| ||||||||.||+++.+|.+|++|||.|......-
T Consensus 1314 EyC~~GsLa~ll~~gr--i~dE~vt~vyt~qll~gla~LH~~g---IVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~~ 1388 (1509)
T KOG4645|consen 1314 EYCEGGSLASLLEHGR--IEDEMVTRVYTKQLLEGLAYLHEHG---IVHRDIKPANILLDFNGLIKYGDFGSAVKIKNNA 1388 (1509)
T ss_pred HHhccCcHHHHHHhcc--hhhhhHHHHHHHHHHHHHHHHHhcC---ceecCCCccceeeecCCcEEeecccceeEecCch
Confidence 9999999999996543 3667777789999999999999999 9999999999999999999999999998876431
Q ss_pred CCCcccceeeeeecccCCccCchhcccC---CCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhcc
Q 003158 667 IEGIVPAHVSTVVKGTPGYLDPEYFLTH---KLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVID 743 (843)
Q Consensus 667 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 743 (843)
. ..+ .......||+.|||||++.+. ...-+.||||+||++.||+||+.||..-++.. ..|+.+-.
T Consensus 1389 ~--~~~-~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne~---------aIMy~V~~ 1456 (1509)
T KOG4645|consen 1389 Q--TMP-GELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNEW---------AIMYHVAA 1456 (1509)
T ss_pred h--cCC-HHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccchh---------HHHhHHhc
Confidence 1 111 222356799999999999863 45668999999999999999999997655422 34566667
Q ss_pred CCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 003158 744 GNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMR 780 (843)
Q Consensus 744 ~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~ 780 (843)
+..+++|+..+.+-.+++..|+..||++|-++.|+++
T Consensus 1457 gh~Pq~P~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle 1493 (1509)
T KOG4645|consen 1457 GHKPQIPERLSSEGRDFLEHCLEQDPKMRWTASQLLE 1493 (1509)
T ss_pred cCCCCCchhhhHhHHHHHHHHHhcCchhhhHHHHHHH
Confidence 7778888887777778888888888877766555543
No 338
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=100.00 E-value=2.2e-34 Score=309.03 Aligned_cols=199 Identities=28% Similarity=0.351 Sum_probs=168.3
Q ss_pred CCCCCCcccccCCeeEEEEEe----CCCcEEEEEEeccCCh----hhHHHHHHHHHHHHhc-cCCcccceeeeeecCCcE
Q 003158 512 NFNSSTQIGQGGYGKVYKGIL----PDGTVVAVKRAQEGSL----QGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQ 582 (843)
Q Consensus 512 ~~~~~~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~~----~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~ 582 (843)
+|++.+.||+|+||.||++.. .+++.||||.+..... ...+.+.+|+++++++ +|+||+++++.+......
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~ 80 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKL 80 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEE
Confidence 477788999999999999984 2578999999874322 2235688999999999 599999999999999999
Q ss_pred EEEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccC
Q 003158 583 MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLA 662 (843)
Q Consensus 583 ~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~ 662 (843)
++||||+++|+|.+++... ..+++..+..++.|+++||.|||+.+ ++||||||+||+++.++.++|+|||+++..
T Consensus 81 ~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~ql~~~l~~lH~~~---~~H~dl~p~nil~~~~~~~~l~dfg~~~~~ 155 (288)
T cd05583 81 HLILDYVNGGELFTHLYQR--EHFTESEVRVYIAEIVLALDHLHQLG---IIYRDIKLENILLDSEGHVVLTDFGLSKEF 155 (288)
T ss_pred EEEEecCCCCcHHHHHhhc--CCcCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHeEECCCCCEEEEECcccccc
Confidence 9999999999999998653 35788899999999999999999988 999999999999999999999999998765
Q ss_pred CCCCCCCcccceeeeeecccCCccCchhcccCC--CCchhhhHHHHHHHHHHHhCCCCCCC
Q 003158 663 PVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHK--LTDKSDVYSLGVVFLELLTGMQPISH 721 (843)
Q Consensus 663 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~sDvwS~G~~l~elltg~~pf~~ 721 (843)
.... ........|+..|+|||.+.+.. .+.++||||||+++|||++|..||..
T Consensus 156 ~~~~------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~ 210 (288)
T cd05583 156 LAEE------EERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTV 210 (288)
T ss_pred cccc------ccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCccc
Confidence 4321 11112345788999999987755 78899999999999999999999853
No 339
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=100.00 E-value=1.5e-34 Score=309.24 Aligned_cols=278 Identities=26% Similarity=0.405 Sum_probs=209.0
Q ss_pred CCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCChh--hHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEEecC
Q 003158 513 FNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ--GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFM 589 (843)
Q Consensus 513 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e~~ 589 (843)
|++.+.||+|++|.||+|... +++.+|+|.+...... ....+.+|++++++++|+||+++++++.+.+..++||||+
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 80 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFM 80 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEecc
Confidence 567789999999999999964 7899999998754332 3567889999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCCCC
Q 003158 590 SNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEG 669 (843)
Q Consensus 590 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~ 669 (843)
+ ++|.+++.... ..+++..++.++.|+++||.|||+.+ |+|+||||+||++++++.++|+|||.+.......
T Consensus 81 ~-~~l~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~--- 152 (283)
T cd05118 81 D-TDLYKLIKDRQ-RGLPESLIKSYLYQLLQGLAFCHSHG---ILHRDLKPENLLINTEGVLKLADFGLARSFGSPV--- 152 (283)
T ss_pred C-CCHHHHHHhhc-ccCCHHHHHHHHHHHHHHHHHHHHCC---eeecCcCHHHEEECCCCcEEEeeeeeeEecCCCc---
Confidence 6 48988886643 46899999999999999999999999 9999999999999999999999999997664321
Q ss_pred cccceeeeeecccCCccCchhcccC-CCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhccCCCCC
Q 003158 670 IVPAHVSTVVKGTPGYLDPEYFLTH-KLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGS 748 (843)
Q Consensus 670 ~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 748 (843)
.......++..|+|||.+.+. .++.++||||+|+++|+|++|+.||...... +....... ..+.
T Consensus 153 ----~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~-~~~~~~~~----------~~~~ 217 (283)
T cd05118 153 ----RPYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEI-DQLFKIFR----------TLGT 217 (283)
T ss_pred ----ccccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHH----------HcCC
Confidence 111234577889999999876 7899999999999999999999999765432 22221110 0111
Q ss_pred CCHHHHHHHHHHHHHhcccCCCCC-CCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCCCCccCCCCCcc
Q 003158 749 YPSECVEKFIKLALKCCQDETDAR-PSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYV 823 (843)
Q Consensus 749 ~~~~~~~~l~~l~~~c~~~~p~~R-Ps~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~sa~e~L~Hp~f 823 (843)
...+....+.+....+....|... ....++. +..+....+|+.+|+..||.+||+++|++.||||
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~~~~~ 283 (283)
T cd05118 218 PDPEVWPKFTSLARNYKFSFPKKAGMPLPKLF----------PNASPQALDLLSQMLHYDPHKRITAEQALAHPYF 283 (283)
T ss_pred CchHhcccchhhhhhhhhhhccccccCHHHhh----------hhhCHHHHHHHHHHhccCcccCcCHHHHhhCCCC
Confidence 111222222222222211112211 1221111 2234556689999999999999999999999997
No 340
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=100.00 E-value=2.2e-34 Score=316.15 Aligned_cols=291 Identities=25% Similarity=0.338 Sum_probs=206.6
Q ss_pred cCCCC-CCcccccCCeeEEEEEeC-CCcEEEEEEeccCChhh--------------HHHHHHHHHHHHhccCCcccceee
Q 003158 511 NNFNS-STQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQG--------------EKEFLTEIQFLSRLHHRNLVSLVG 574 (843)
Q Consensus 511 ~~~~~-~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~--------------~~~~~~E~~~l~~l~h~nIv~l~~ 574 (843)
++|.. .+.||+|+||+||+|... +++.||||.+....... ...+.+|+++++.++|+||+++++
T Consensus 8 ~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~ 87 (335)
T PTZ00024 8 ERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVD 87 (335)
T ss_pred cchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeE
Confidence 45654 467999999999999965 68999999886432221 125778999999999999999999
Q ss_pred eeecCCcEEEEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEe
Q 003158 575 YCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVA 654 (843)
Q Consensus 575 ~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~ 654 (843)
++...+..++||||++ |+|.+++... ..+++.....++.|++.||+|||+.+ |+||||||+||+++.++.++|+
T Consensus 88 ~~~~~~~~~lv~e~~~-~~l~~~l~~~--~~~~~~~~~~~~~ql~~aL~~LH~~~---i~H~dl~~~nill~~~~~~kl~ 161 (335)
T PTZ00024 88 VYVEGDFINLVMDIMA-SDLKKVVDRK--IRLTESQVKCILLQILNGLNVLHKWY---FMHRDLSPANIFINSKGICKIA 161 (335)
T ss_pred EEecCCcEEEEEeccc-cCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCC---eecccccHHHeEECCCCCEEEC
Confidence 9999999999999996 6999998653 34788999999999999999999999 9999999999999999999999
Q ss_pred eccccccCCCCCCCCc-------ccceeeeeecccCCccCchhcccC-CCCchhhhHHHHHHHHHHHhCCCCCCCCcchH
Q 003158 655 DFGLSRLAPVPDIEGI-------VPAHVSTVVKGTPGYLDPEYFLTH-KLTDKSDVYSLGVVFLELLTGMQPISHGKNIV 726 (843)
Q Consensus 655 DfGla~~~~~~~~~~~-------~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~ 726 (843)
|||++........... ..........++..|+|||.+.+. .++.++|||||||++|||++|+.||....+..
T Consensus 162 dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~ 241 (335)
T PTZ00024 162 DFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEID 241 (335)
T ss_pred CccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence 9999976542111000 001111233467889999999764 46889999999999999999999997654322
Q ss_pred HHHHHHhhcccchhhccCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCC
Q 003158 727 REVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTS 806 (843)
Q Consensus 727 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~ 806 (843)
. ...... .. +..+...+.....+... ....+...+... ...+.....+.+++.+||..
T Consensus 242 ~-~~~i~~------~~----~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~----------~~~~~~~~~~~~li~~~l~~ 299 (335)
T PTZ00024 242 Q-LGRIFE------LL----GTPNEDNWPQAKKLPLY-TEFTPRKPKDLK----------TIFPNASDDAIDLLQSLLKL 299 (335)
T ss_pred H-HHHHHH------Hh----CCCchhhCcchhhcccc-cccCcCCcccHH----------HhCcCCChHHHHHHHHHcCC
Confidence 1 111100 00 00000000000000000 000011111111 11233345567899999999
Q ss_pred CCCCCCCCccCCCCCcccCCCCC
Q 003158 807 KEETPPSSSSMLKHPYVSSDVSG 829 (843)
Q Consensus 807 dp~~R~sa~e~L~Hp~f~~~~~~ 829 (843)
||++|+|++|+|.||||++...-
T Consensus 300 ~P~~R~s~~~~l~~~~~~~~~~~ 322 (335)
T PTZ00024 300 NPLERISAKEALKHEYFKSDPLP 322 (335)
T ss_pred CchhccCHHHHhcCcccCCCCCC
Confidence 99999999999999999877553
No 341
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=100.00 E-value=3.8e-34 Score=305.51 Aligned_cols=191 Identities=27% Similarity=0.383 Sum_probs=159.0
Q ss_pred cccccCCeeEEEEEeC-CCcEEEEEEeccCChh---hHHHHHHHHH---HHHhccCCcccceeeeeecCCcEEEEEecCC
Q 003158 518 QIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ---GEKEFLTEIQ---FLSRLHHRNLVSLVGYCDEEGEQMLVYEFMS 590 (843)
Q Consensus 518 ~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~E~~---~l~~l~h~nIv~l~~~~~~~~~~~lV~e~~~ 590 (843)
.||+|+||.||+|... +++.||+|.+...... ....+..|.. .++...||+|+++++++.+.+..++||||++
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN 80 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence 4899999999999864 6899999988753322 1223344443 4445579999999999999999999999999
Q ss_pred CCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCCCCc
Q 003158 591 NGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGI 670 (843)
Q Consensus 591 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~ 670 (843)
+|+|.+++... ..+++..++.++.|+++||.|||+.+ |+||||||+||++++++.+||+|||++.......
T Consensus 81 g~~L~~~l~~~--~~l~~~~~~~~~~ql~~~l~~lH~~~---i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~~---- 151 (278)
T cd05606 81 GGDLHYHLSQH--GVFSEAEMRFYAAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKK---- 151 (278)
T ss_pred CCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC---EEcCCCCHHHEEECCCCCEEEccCcCccccCccC----
Confidence 99999988653 35899999999999999999999998 9999999999999999999999999987543211
Q ss_pred ccceeeeeecccCCccCchhcccC-CCCchhhhHHHHHHHHHHHhCCCCCCCC
Q 003158 671 VPAHVSTVVKGTPGYLDPEYFLTH-KLTDKSDVYSLGVVFLELLTGMQPISHG 722 (843)
Q Consensus 671 ~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwS~G~~l~elltg~~pf~~~ 722 (843)
.....|+..|+|||.+.+. .++.++||||+||++|||++|+.||...
T Consensus 152 -----~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~ 199 (278)
T cd05606 152 -----PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQH 199 (278)
T ss_pred -----CcCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCC
Confidence 1233588999999999754 6889999999999999999999999754
No 342
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=100.00 E-value=4.6e-34 Score=307.24 Aligned_cols=200 Identities=26% Similarity=0.435 Sum_probs=174.9
Q ss_pred cCCCCCCcccccCCeeEEEEEe-CCCcEEEEEEeccCChhhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEEecC
Q 003158 511 NNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFM 589 (843)
Q Consensus 511 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e~~ 589 (843)
++|.+.+.||+|+||.||+|.. .+++.||+|.+........+.+.+|+.+++.++||||+++++++...+..++|+||+
T Consensus 19 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~ 98 (293)
T cd06647 19 KKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVMEYL 98 (293)
T ss_pred hhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEEecC
Confidence 6888999999999999999985 468899999987554455567899999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCCCC
Q 003158 590 SNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEG 669 (843)
Q Consensus 590 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~ 669 (843)
++++|.+++.+. .+++..+..++.|++.||.|||+++ ++||||||+||+++.++.++|+|||++.......
T Consensus 99 ~~~~L~~~~~~~---~l~~~~~~~i~~~l~~al~~LH~~g---i~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~--- 169 (293)
T cd06647 99 AGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ--- 169 (293)
T ss_pred CCCcHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHhCC---EeeccCCHHHEEEcCCCCEEEccCcceecccccc---
Confidence 999999998653 3678889999999999999999999 9999999999999999999999999887554221
Q ss_pred cccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCc
Q 003158 670 IVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 723 (843)
Q Consensus 670 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~ 723 (843)
.......+++.|+|||.+....++.++|||||||++||+++|+.||....
T Consensus 170 ----~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~ 219 (293)
T cd06647 170 ----SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNEN 219 (293)
T ss_pred ----cccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 11223458889999999988889999999999999999999999997543
No 343
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=100.00 E-value=1e-34 Score=318.74 Aligned_cols=283 Identities=24% Similarity=0.374 Sum_probs=207.3
Q ss_pred HcCCCCCCcccccCCeeEEEEEe-CCCcEEEEEEeccC--ChhhHHHHHHHHHHHHhccCCcccceeeeeecC-----Cc
Q 003158 510 TNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEG--SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE-----GE 581 (843)
Q Consensus 510 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~-----~~ 581 (843)
.++|.+.+.||+|+||+||+|.. .+++.||||.+... .....+.+.+|+.+++.++|+||+++++++... ..
T Consensus 4 ~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~ 83 (337)
T cd07858 4 DTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFND 83 (337)
T ss_pred ccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCc
Confidence 45788999999999999999995 46899999998753 223345678899999999999999999988543 35
Q ss_pred EEEEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeecccccc
Q 003158 582 QMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRL 661 (843)
Q Consensus 582 ~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~ 661 (843)
.++||||+. ++|.+++... ..+++..+..++.|++.||.|||+++ ++||||||+||+++.++.+||+|||+++.
T Consensus 84 ~~lv~e~~~-~~L~~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~~---i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~ 157 (337)
T cd07858 84 VYIVYELMD-TDLHQIIRSS--QTLSDDHCQYFLYQLLRGLKYIHSAN---VLHRDLKPSNLLLNANCDLKICDFGLART 157 (337)
T ss_pred EEEEEeCCC-CCHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEEcCCCCEEECcCccccc
Confidence 799999995 7999988654 35889999999999999999999998 99999999999999999999999999986
Q ss_pred CCCCCCCCcccceeeeeecccCCccCchhccc-CCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchh
Q 003158 662 APVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFS 740 (843)
Q Consensus 662 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~ 740 (843)
..... .......++..|+|||.+.+ ..++.++|||||||++|+|++|+.||...... ....... .
T Consensus 158 ~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~-~~~~~~~------~ 223 (337)
T cd07858 158 TSEKG-------DFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYV-HQLKLIT------E 223 (337)
T ss_pred cCCCc-------ccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChH-HHHHHHH------H
Confidence 54321 11223457889999999875 46889999999999999999999999654321 1111100 0
Q ss_pred hccCCCCCCCHHHHH-----HHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCCCCc
Q 003158 741 VIDGNMGSYPSECVE-----KFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSS 815 (843)
Q Consensus 741 ~~~~~~~~~~~~~~~-----~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~sa~ 815 (843)
.. +..+.+... ...+.+. ......++... ...+.......+++++||+.||++|||++
T Consensus 224 ~~----~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~----------~~~~~~~~~~~~li~~~l~~~P~~Rps~~ 286 (337)
T cd07858 224 LL----GSPSEEDLGFIRNEKARRYIR---SLPYTPRQSFA----------RLFPHANPLAIDLLEKMLVFDPSKRITVE 286 (337)
T ss_pred Hh----CCCChHHhhhcCchhhhHHHH---hcCcccccCHH----------HHcccCCHHHHHHHHHHhcCChhhccCHH
Confidence 10 111111000 0000000 00011112221 11234455567899999999999999999
Q ss_pred cCCCCCcccCCCCC
Q 003158 816 SMLKHPYVSSDVSG 829 (843)
Q Consensus 816 e~L~Hp~f~~~~~~ 829 (843)
|+++||||......
T Consensus 287 ell~h~~~~~~~~~ 300 (337)
T cd07858 287 EALAHPYLASLHDP 300 (337)
T ss_pred HHHcCcchhhhcCc
Confidence 99999999764443
No 344
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=100.00 E-value=1.7e-34 Score=309.58 Aligned_cols=276 Identities=26% Similarity=0.365 Sum_probs=200.3
Q ss_pred CCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCChh--hHHHHHHHHHHHHhc---cCCcccceeeeeecCCc-----
Q 003158 513 FNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ--GEKEFLTEIQFLSRL---HHRNLVSLVGYCDEEGE----- 581 (843)
Q Consensus 513 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l---~h~nIv~l~~~~~~~~~----- 581 (843)
|++.+.||+|+||.||+|+.+ +++.||+|++...... ....+.+|+.+++++ .|+||+++++++...+.
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~ 80 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK 80 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence 567889999999999999976 5899999998743222 234566788777666 59999999999987766
Q ss_pred EEEEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeecccccc
Q 003158 582 QMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRL 661 (843)
Q Consensus 582 ~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~ 661 (843)
.+++|||+. ++|.+++.......+++..++.++.|+++||.|||+.+ ++|+||+|+||++++++.+||+|||.+..
T Consensus 81 ~~l~~e~~~-~~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~---i~h~~l~~~nili~~~~~~~l~dfg~~~~ 156 (287)
T cd07838 81 LTLVFEHVD-QDLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHR---IVHRDLKPQNILVTSDGQVKIADFGLARI 156 (287)
T ss_pred eEEEehhcc-cCHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCChhhEEEccCCCEEEeccCccee
Confidence 999999996 58999987655456899999999999999999999998 99999999999999999999999999977
Q ss_pred CCCCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhh
Q 003158 662 APVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSV 741 (843)
Q Consensus 662 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~ 741 (843)
..... ......++..|+|||++.+..++.++|||||||++|||++|+.||..... .+...........
T Consensus 157 ~~~~~--------~~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~-~~~~~~~~~~~~~--- 224 (287)
T cd07838 157 YSFEM--------ALTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSE-ADQLDKIFDVIGL--- 224 (287)
T ss_pred ccCCc--------ccccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCCh-HHHHHHHHHHcCC---
Confidence 54321 11223478899999999999999999999999999999999888865432 2222211110000
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCCCCccCCCCC
Q 003158 742 IDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHP 821 (843)
Q Consensus 742 ~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~sa~e~L~Hp 821 (843)
......+. .......++...+. +.+.++. +.......+++.+|+..||++||+++|++.||
T Consensus 225 ------~~~~~~~~-~~~~~~~~~~~~~~--~~~~~~~----------~~~~~~~~~li~~~l~~dp~~Rp~~~~il~~~ 285 (287)
T cd07838 225 ------PSEEEWPR-NVSLPRSSFPSYTP--RSFKSFV----------PEICEEGLDLLKKMLTFNPHKRISAFEALQHP 285 (287)
T ss_pred ------CChHhcCC-Ccccchhhcccccc--cchhhhh----------hhhhHHHHHHHHHHhccCCccCCCHHHHhcCc
Confidence 00000000 00000001110000 1111111 12234455899999999999999999999999
Q ss_pred cc
Q 003158 822 YV 823 (843)
Q Consensus 822 ~f 823 (843)
||
T Consensus 286 ~~ 287 (287)
T cd07838 286 YF 287 (287)
T ss_pred CC
Confidence 97
No 345
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=100.00 E-value=2.5e-34 Score=315.86 Aligned_cols=290 Identities=26% Similarity=0.397 Sum_probs=209.5
Q ss_pred HHcCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccC--ChhhHHHHHHHHHHHHhc-cCCcccceeeeeecC--CcE
Q 003158 509 ATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEG--SLQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEE--GEQ 582 (843)
Q Consensus 509 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~--~~~ 582 (843)
..++|++.+.||+|+||.||+|... +++.||+|++... .......+.+|+.+++++ +|+||+++++++... ...
T Consensus 5 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~ 84 (337)
T cd07852 5 ILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDI 84 (337)
T ss_pred hhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceE
Confidence 4567888999999999999999965 6889999988542 223345677899999999 999999999998643 368
Q ss_pred EEEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccC
Q 003158 583 MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLA 662 (843)
Q Consensus 583 ~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~ 662 (843)
++||||++ ++|.+++... .+++..++.++.||+.||+|||+.+ |+||||||+||+++.++.+||+|||++...
T Consensus 85 ~lv~e~~~-~~L~~~~~~~---~~~~~~~~~i~~qi~~~L~~LH~~~---i~H~dl~p~nill~~~~~~kl~d~g~~~~~ 157 (337)
T cd07852 85 YLVFEYME-TDLHAVIRAN---ILEDVHKRYIMYQLLKALKYIHSGN---VIHRDLKPSNILLNSDCRVKLADFGLARSL 157 (337)
T ss_pred EEEecccc-cCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCcEEEeeccchhcc
Confidence 99999996 5999988653 5788899999999999999999998 999999999999999999999999999865
Q ss_pred CCCCCCCcccceeeeeecccCCccCchhccc-CCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhh
Q 003158 663 PVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSV 741 (843)
Q Consensus 663 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~ 741 (843)
....... .........|+..|+|||.+.+ ..++.++|||||||++|||++|+.||....... ........
T Consensus 158 ~~~~~~~--~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~-~~~~~~~~------ 228 (337)
T cd07852 158 SELEENP--ENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLN-QLEKIIEV------ 228 (337)
T ss_pred ccccccc--cCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHH------
Confidence 4322110 0112233468899999998865 557889999999999999999999996544321 11111000
Q ss_pred ccCCCCCCCHHHHHHHH-HHHHHhcccCC-CCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCCCCccCCC
Q 003158 742 IDGNMGSYPSECVEKFI-KLALKCCQDET-DARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLK 819 (843)
Q Consensus 742 ~~~~~~~~~~~~~~~l~-~l~~~c~~~~p-~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~sa~e~L~ 819 (843)
.+..+.+....+. .....++...+ ..++.+.+ ..+.......+++.+|++.||++|||+.++++
T Consensus 229 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~ 294 (337)
T cd07852 229 ----IGPPSAEDIESIKSPFAATMLDSLPSRPRKPLDE----------LLPKASDDALDLLKKLLVFNPNKRLTAEEALE 294 (337)
T ss_pred ----hCCCCHHHHHHHHhhhHHHhhhhcccccccchhh----------hccCCCHHHHHHHHHhccCCcccccCHHHHhh
Confidence 0111222222111 11111222111 11122211 12233455668999999999999999999999
Q ss_pred CCcccCCCC
Q 003158 820 HPYVSSDVS 828 (843)
Q Consensus 820 Hp~f~~~~~ 828 (843)
||||..-..
T Consensus 295 ~~~~~~~~~ 303 (337)
T cd07852 295 HPYVAQFHN 303 (337)
T ss_pred Chhhhhhcc
Confidence 999976533
No 346
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=100.00 E-value=7e-35 Score=283.80 Aligned_cols=249 Identities=24% Similarity=0.396 Sum_probs=201.2
Q ss_pred CCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccC-ChhhHHHHHHHHHHHHhcc-CCcccceeeeeecCCcEEEEEec
Q 003158 512 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEG-SLQGEKEFLTEIQFLSRLH-HRNLVSLVGYCDEEGEQMLVYEF 588 (843)
Q Consensus 512 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~-h~nIv~l~~~~~~~~~~~lV~e~ 588 (843)
+.+.+..||.|..|.||++..+ .|...|||.+... ..+..+++...+.++..-+ +|.||+.+|||..+...++.||.
T Consensus 93 dl~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMel 172 (391)
T KOG0983|consen 93 DLENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICMEL 172 (391)
T ss_pred HhhhHHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHHH
Confidence 3444677999999999999965 5899999998754 4455688888888776654 99999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCCC
Q 003158 589 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 668 (843)
Q Consensus 589 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 668 (843)
| .-.++.++.+ -..++++..+-++...+.+||.||-+++ .|||||+||+|||+|+.|++|++|||++-.+..
T Consensus 173 M-s~C~ekLlkr-ik~piPE~ilGk~tva~v~AL~YLKeKH--~viHRDvKPSNILlDe~GniKlCDFGIsGrlvd---- 244 (391)
T KOG0983|consen 173 M-STCAEKLLKR-IKGPIPERILGKMTVAIVKALYYLKEKH--GVIHRDVKPSNILLDERGNIKLCDFGISGRLVD---- 244 (391)
T ss_pred H-HHHHHHHHHH-hcCCchHHhhhhhHHHHHHHHHHHHHhc--ceeecccCccceEEccCCCEEeecccccceeec----
Confidence 9 4466666644 4457999999999999999999998866 399999999999999999999999999976543
Q ss_pred CcccceeeeeecccCCccCchhccc---CCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhccCC
Q 003158 669 GIVPAHVSTVVKGTPGYLDPEYFLT---HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGN 745 (843)
Q Consensus 669 ~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 745 (843)
+...+...|.+.|||||.+.- ..|+-++||||||++++||.||+.||...+...+.+.. +.+..
T Consensus 245 ----SkAhtrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~ltk---------vln~e 311 (391)
T KOG0983|consen 245 ----SKAHTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFEVLTK---------VLNEE 311 (391)
T ss_pred ----ccccccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHHHHHH---------HHhcC
Confidence 233455679999999999964 46888999999999999999999999875544443333 22222
Q ss_pred CCC--CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 003158 746 MGS--YPSECVEKFIKLALKCCQDETDARPSMSEVMRE 781 (843)
Q Consensus 746 ~~~--~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~ 781 (843)
.+. ....+++.+.+++..|+.+|+.+||.+.+++++
T Consensus 312 PP~L~~~~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~h 349 (391)
T KOG0983|consen 312 PPLLPGHMGFSPDFQSFVKDCLTKDHRKRPKYNKLLEH 349 (391)
T ss_pred CCCCCcccCcCHHHHHHHHHHhhcCcccCcchHHHhcC
Confidence 222 233478899999999999999999999988754
No 347
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=100.00 E-value=5.9e-34 Score=303.85 Aligned_cols=198 Identities=29% Similarity=0.470 Sum_probs=171.0
Q ss_pred CCCCCCcccccCCeeEEEEEe-CCCcEEEEEEeccCC-hhhHHHHHHHHHHHHhcc---CCcccceeeeeecCCcEEEEE
Q 003158 512 NFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLH---HRNLVSLVGYCDEEGEQMLVY 586 (843)
Q Consensus 512 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~---h~nIv~l~~~~~~~~~~~lV~ 586 (843)
.|+..+.||+|+||.||+|.. .+++.||+|.+.... ....+++.+|+++++.++ |||++++++++......++||
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~ 81 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIM 81 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEE
Confidence 477788999999999999996 478999999987543 233467889999999997 999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCC
Q 003158 587 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 666 (843)
Q Consensus 587 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~ 666 (843)
||+++++|.++++.. ++++..++.++.|++.||.|||+.+ |+||||+|+||++++++.++|+|||++.......
T Consensus 82 e~~~~~~L~~~~~~~---~l~~~~~~~i~~~i~~~l~~lh~~~---i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~ 155 (277)
T cd06917 82 EYAEGGSVRTLMKAG---PIAEKYISVIIREVLVALKYIHKVG---VIHRDIKAANILVTNTGNVKLCDFGVAALLNQNS 155 (277)
T ss_pred ecCCCCcHHHHHHcc---CCCHHHHHHHHHHHHHHHHHHHhCC---cccCCcCHHHEEEcCCCCEEEccCCceeecCCCc
Confidence 999999999998543 5889999999999999999999999 9999999999999999999999999998664322
Q ss_pred CCCcccceeeeeecccCCccCchhccc-CCCCchhhhHHHHHHHHHHHhCCCCCCCC
Q 003158 667 IEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHG 722 (843)
Q Consensus 667 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwS~G~~l~elltg~~pf~~~ 722 (843)
.......|+..|+|||.+.+ ..++.++|||||||++|+|++|+.||...
T Consensus 156 -------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~ 205 (277)
T cd06917 156 -------SKRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDV 205 (277)
T ss_pred -------cccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCC
Confidence 11223458889999999875 45688999999999999999999999654
No 348
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=100.00 E-value=7.4e-34 Score=303.16 Aligned_cols=247 Identities=26% Similarity=0.411 Sum_probs=196.6
Q ss_pred cCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCC-hhhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEEec
Q 003158 511 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 588 (843)
Q Consensus 511 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e~ 588 (843)
+-|+..+.||+|+||.||+|... +++.||+|.+.... ....+.+.+|++++++++||||+++++++..+...++||||
T Consensus 4 ~~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 83 (277)
T cd06641 4 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEY 83 (277)
T ss_pred HhhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEe
Confidence 34677889999999999999864 68999999886433 23346788999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCCC
Q 003158 589 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 668 (843)
Q Consensus 589 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 668 (843)
+++++|.+++.. ..+++..+..++.|++.|+.|||+.+ ++|+||||+||+++.++.++|+|||++.......
T Consensus 84 ~~~~~l~~~i~~---~~~~~~~~~~~~~~l~~~l~~lh~~~---i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~-- 155 (277)
T cd06641 84 LGGGSALDLLEP---GPLDETQIATILREILKGLDYLHSEK---KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ-- 155 (277)
T ss_pred CCCCcHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHccCC---eecCCCCHHhEEECCCCCEEEeecccceecccch--
Confidence 999999999854 35789999999999999999999998 9999999999999999999999999987654321
Q ss_pred CcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhccCCCCC
Q 003158 669 GIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGS 748 (843)
Q Consensus 669 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 748 (843)
.......++..|+|||.+.+..++.++|||||||++|||++|..||..... ..... .+.......
T Consensus 156 -----~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~-~~~~~---------~~~~~~~~~ 220 (277)
T cd06641 156 -----IKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHP-MKVLF---------LIPKNNPPT 220 (277)
T ss_pred -----hhhccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccch-HHHHH---------HHhcCCCCC
Confidence 111234578899999999988889999999999999999999999964332 11111 011111222
Q ss_pred CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 003158 749 YPSECVEKFIKLALKCCQDETDARPSMSEVMR 780 (843)
Q Consensus 749 ~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~ 780 (843)
.+..++..+.+++.+||+.+|.+||++.++++
T Consensus 221 ~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~ 252 (277)
T cd06641 221 LEGNYSKPLKEFVEACLNKEPSFRPTAKELLK 252 (277)
T ss_pred CCcccCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 34445566777777777777777777777665
No 349
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=100.00 E-value=1.4e-34 Score=308.83 Aligned_cols=208 Identities=25% Similarity=0.371 Sum_probs=176.5
Q ss_pred cCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCC---hhhHHHHHHHHHHHHhcc-CCcccceeeeeecCCcEEEE
Q 003158 511 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLH-HRNLVSLVGYCDEEGEQMLV 585 (843)
Q Consensus 511 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~-h~nIv~l~~~~~~~~~~~lV 585 (843)
++|...+.||+|+||.||+|... +++.||+|++.... ....+.+.+|++++++++ |+||+++++++.+.+..++|
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv 80 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFV 80 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEE
Confidence 46888999999999999999965 79999999987532 233467889999999998 99999999999999999999
Q ss_pred EecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCC
Q 003158 586 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVP 665 (843)
Q Consensus 586 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~ 665 (843)
|||+++++|.+++.... .+++..++.++.|++.||.|||+.+ ++|+||||+||+++.++.++++|||++......
T Consensus 81 ~e~~~~~~L~~~l~~~~--~l~~~~~~~i~~ql~~~l~~Lh~~~---~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~~ 155 (280)
T cd05581 81 LEYAPNGELLQYIRKYG--SLDEKCTRFYAAEILLALEYLHSKG---IIHRDLKPENILLDKDMHIKITDFGTAKVLDPN 155 (280)
T ss_pred EcCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCHHHeEECCCCCEEecCCccccccCCc
Confidence 99999999999997643 5899999999999999999999999 999999999999999999999999999866432
Q ss_pred CCCCcc-------------cceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCc
Q 003158 666 DIEGIV-------------PAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 723 (843)
Q Consensus 666 ~~~~~~-------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~ 723 (843)
...... .........++..|+|||...+..++.++||||||++++++++|+.||....
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~ 226 (280)
T cd05581 156 SSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSN 226 (280)
T ss_pred cccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCcc
Confidence 211000 0012233457889999999998889999999999999999999999997543
No 350
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=100.00 E-value=8.7e-35 Score=310.90 Aligned_cols=277 Identities=28% Similarity=0.432 Sum_probs=206.4
Q ss_pred CCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCC--hhhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEEecC
Q 003158 513 FNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFM 589 (843)
Q Consensus 513 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e~~ 589 (843)
|+..+.||+|++|.||+|+.. +++.||+|.+.... ....+.+..|+++++.++|+||+++++++.+.+..++||||+
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~ 80 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYC 80 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCc
Confidence 556788999999999999965 59999999988643 223467788999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCCCC
Q 003158 590 SNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEG 669 (843)
Q Consensus 590 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~ 669 (843)
+ ++|.+++.... ..+++..++.++.|+++||+|||+.+ |+||||+|+||++++++.++|+|||.++......
T Consensus 81 ~-~~l~~~i~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~--- 152 (282)
T cd07829 81 D-MDLKKYLDKRP-GPLSPNLIKSIMYQLLRGLAYCHSHR---ILHRDLKPQNILINRDGVLKLADFGLARAFGIPL--- 152 (282)
T ss_pred C-cCHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCChheEEEcCCCCEEEecCCcccccCCCc---
Confidence 7 59999997643 35889999999999999999999998 9999999999999999999999999997654321
Q ss_pred cccceeeeeecccCCccCchhcccC-CCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhccCCCCC
Q 003158 670 IVPAHVSTVVKGTPGYLDPEYFLTH-KLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGS 748 (843)
Q Consensus 670 ~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 748 (843)
.......++..|+|||.+.+. .++.++|||||||++|||++|+.||...... ........ ....
T Consensus 153 ----~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~-~~~~~~~~----------~~~~ 217 (282)
T cd07829 153 ----RTYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEI-DQLFKIFQ----------ILGT 217 (282)
T ss_pred ----cccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHH-HHHHHHHH----------HhCC
Confidence 111233456789999999876 7899999999999999999999888654432 11111100 0111
Q ss_pred CCHHHHHHHHHHHHHhcccC-CCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCCCCccCCCCCcc
Q 003158 749 YPSECVEKFIKLALKCCQDE-TDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYV 823 (843)
Q Consensus 749 ~~~~~~~~l~~l~~~c~~~~-p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~sa~e~L~Hp~f 823 (843)
..+..+..+..+. -+... |..... .....++..+..+.+++++|+..||++||++++++.||||
T Consensus 218 ~~~~~~~~~~~~~--~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~p~~ 282 (282)
T cd07829 218 PTEESWPGVTKLP--DYKPTFPKFPPK---------DLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALKHPYF 282 (282)
T ss_pred CcHHHHHhhcccc--cccccccccCcc---------chHHhcccccHHHHHHHHHhhccCcccCCCHHHHhhCcCC
Confidence 1112222221111 00000 000000 0011223335567789999999999999999999999998
No 351
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=100.00 E-value=1.2e-34 Score=311.51 Aligned_cols=193 Identities=26% Similarity=0.438 Sum_probs=168.6
Q ss_pred CcccccCCeeEEEEEe-CCCcEEEEEEeccCChhhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEEecCCCCCHH
Q 003158 517 TQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLR 595 (843)
Q Consensus 517 ~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e~~~~gsL~ 595 (843)
..||+|+||.||+|.. .+++.||+|.+..........+.+|+.+++.++|+||+++++++...+..++||||+++++|.
T Consensus 26 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~ 105 (292)
T cd06657 26 IKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALT 105 (292)
T ss_pred HHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCCCcHH
Confidence 5799999999999986 478999999987555555667899999999999999999999999999999999999999999
Q ss_pred HHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCCCCccccee
Q 003158 596 DQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHV 675 (843)
Q Consensus 596 ~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~ 675 (843)
+++... .+++..+..++.|++.||+|||+.+ ++||||||+||++++++.++|+|||++....... ..
T Consensus 106 ~~~~~~---~~~~~~~~~~~~ql~~~l~~lH~~g---ivH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~-------~~ 172 (292)
T cd06657 106 DIVTHT---RMNEEQIAAVCLAVLKALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV-------PR 172 (292)
T ss_pred HHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEEcccccceeccccc-------cc
Confidence 987542 4788899999999999999999998 9999999999999999999999999887543211 11
Q ss_pred eeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCC
Q 003158 676 STVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 722 (843)
Q Consensus 676 ~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~ 722 (843)
.....|+..|+|||.+.+..++.++|+||+|+++|||++|..||...
T Consensus 173 ~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~ 219 (292)
T cd06657 173 RKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNE 219 (292)
T ss_pred ccccccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 12345788999999998888999999999999999999999998653
No 352
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=100.00 E-value=1.4e-33 Score=306.86 Aligned_cols=291 Identities=20% Similarity=0.200 Sum_probs=198.3
Q ss_pred CcccccCCeeEEEEEeCCCcEEEEEEeccC--ChhhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEEecCCCCCH
Q 003158 517 TQIGQGGYGKVYKGILPDGTVVAVKRAQEG--SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTL 594 (843)
Q Consensus 517 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e~~~~gsL 594 (843)
+.+|.|+++.||++.. +++.||||++... .....+.+.+|+++++.++|+||+++++++.+.+..+++|||+++|+|
T Consensus 8 ~~~~~~~~v~~~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l 86 (314)
T cd08216 8 KCFEDLMIVHLAKHKP-TNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYGSC 86 (314)
T ss_pred HhhcCCceEEEEEecC-CCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCCCH
Confidence 3344444444444444 6899999998754 233456899999999999999999999999999999999999999999
Q ss_pred HHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCCCCcccce
Q 003158 595 RDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAH 674 (843)
Q Consensus 595 ~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~ 674 (843)
.+++.......+++..+..++.|+++||+|||+++ |+||||||+||+++.++.+||+|||.+...............
T Consensus 87 ~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~---ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~~~~~ 163 (314)
T cd08216 87 EDLLKTHFPEGLPELAIAFILKDVLNALDYIHSKG---FIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRVVHD 163 (314)
T ss_pred HHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCcceEEEecCCceEEecCccceeecccccccccccc
Confidence 99998765566889999999999999999999999 999999999999999999999999998755322211111111
Q ss_pred eeeeecccCCccCchhccc--CCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhccCCCCCCCHH
Q 003158 675 VSTVVKGTPGYLDPEYFLT--HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSE 752 (843)
Q Consensus 675 ~~~~~~gt~~y~aPE~~~~--~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 752 (843)
......++..|+|||++.. ..++.++|||||||++|||++|+.||............. .......++... .+..
T Consensus 164 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~~--~~~~~~~~~~~~--~~~~ 239 (314)
T cd08216 164 FPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEKV--RGTVPCLLDKST--YPLY 239 (314)
T ss_pred ccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH--hccCccccccCc--hhhh
Confidence 2234457788999999976 458889999999999999999999998654332222111 000000000000 0000
Q ss_pred HHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCCCCccCCCCCcccCCC
Q 003158 753 CVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSSDV 827 (843)
Q Consensus 753 ~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~sa~e~L~Hp~f~~~~ 827 (843)
.. .... .+ .....+......-..... ..+....+|+.+||++||++|||++|+|+||||....
T Consensus 240 ~~-~~~~---~~--~~~~~~~~~~~~~~~~~~------~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~p~~~~~~ 302 (314)
T cd08216 240 ED-SMSQ---SR--SSNEHPNNRDSVDHPYTR------TFSEHFHQFVELCLQRDPESRPSASQLLNHSFFKQCK 302 (314)
T ss_pred cC-CcCc---cc--ccccccchhhhhhcchhh------HHHHHHHHHHHHHhhcCCCcCcCHHHHhcCchHhhhc
Confidence 00 0000 00 000000000000000000 0112345789999999999999999999999998654
No 353
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=100.00 E-value=2.3e-34 Score=316.65 Aligned_cols=281 Identities=22% Similarity=0.353 Sum_probs=207.4
Q ss_pred HHcCCCCCCcccccCCeeEEEEEe-CCCcEEEEEEeccCC--hhhHHHHHHHHHHHHhccCCcccceeeeeecCC-----
Q 003158 509 ATNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEG----- 580 (843)
Q Consensus 509 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~----- 580 (843)
..++|++.+.||+|+||.||+|.. .+++.||||++.... ....+.+.+|+++++.++|+||+++++++..+.
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07880 13 VPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDRF 92 (343)
T ss_pred cccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCcccccc
Confidence 467899999999999999999985 478999999986432 223456889999999999999999999986543
Q ss_pred -cEEEEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeecccc
Q 003158 581 -EQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLS 659 (843)
Q Consensus 581 -~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla 659 (843)
..++||||+ +++|.+++.. ..+++..++.++.|+++||+|||+.+ |+||||||+||++++++.+||+|||++
T Consensus 93 ~~~~lv~e~~-~~~l~~~~~~---~~l~~~~~~~i~~qi~~al~~LH~~g---i~H~dlkp~Nill~~~~~~kl~dfg~~ 165 (343)
T cd07880 93 HDFYLVMPFM-GTDLGKLMKH---EKLSEDRIQFLVYQMLKGLKYIHAAG---IIHRDLKPGNLAVNEDCELKILDFGLA 165 (343)
T ss_pred ceEEEEEecC-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEeecccc
Confidence 458999999 7899988853 35889999999999999999999999 999999999999999999999999999
Q ss_pred ccCCCCCCCCcccceeeeeecccCCccCchhccc-CCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccc
Q 003158 660 RLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMM 738 (843)
Q Consensus 660 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~ 738 (843)
...... .....+++.|+|||.+.+ ..++.++|+||+||++|++++|+.||........ ......
T Consensus 166 ~~~~~~----------~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~-~~~~~~---- 230 (343)
T cd07880 166 RQTDSE----------MTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQ-LMEIMK---- 230 (343)
T ss_pred cccccC----------ccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHH----
Confidence 764321 123356889999999876 4588899999999999999999999976543221 111100
Q ss_pred hhhccCCCCCCCHHHHHHHHHH-HHHhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCCCCccC
Q 003158 739 FSVIDGNMGSYPSECVEKFIKL-ALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSM 817 (843)
Q Consensus 739 ~~~~~~~~~~~~~~~~~~l~~l-~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~sa~e~ 817 (843)
.....+.++...+... ...-...-|..++. + +....+.....+.+++.+||..||++|+|+.++
T Consensus 231 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-------~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~ 295 (343)
T cd07880 231 ------VTGTPSKEFVQKLQSEDAKNYVKKLPRFRKK--D-------FRSLLPNANPLAVNVLEKMLVLDAESRITAAEA 295 (343)
T ss_pred ------hcCCCCHHHHHhhcchhHHHHHHhccccCcc--h-------HHHhccCCChHHHHHHHHHcCCChhhCCCHHHH
Confidence 0011122222222100 00000011111111 0 111223445556789999999999999999999
Q ss_pred CCCCcccCC
Q 003158 818 LKHPYVSSD 826 (843)
Q Consensus 818 L~Hp~f~~~ 826 (843)
+.||||+..
T Consensus 296 l~~~~~~~~ 304 (343)
T cd07880 296 LAHPYFEEF 304 (343)
T ss_pred hcCccHhhh
Confidence 999999764
No 354
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=100.00 E-value=1.5e-33 Score=302.26 Aligned_cols=203 Identities=28% Similarity=0.437 Sum_probs=177.4
Q ss_pred HHcCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCChhhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEEe
Q 003158 509 ATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 587 (843)
Q Consensus 509 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e 587 (843)
.++.|+..+.||+|++|.||+|..+ +++.||+|++..... ..+.+.+|+++++.++|+||+++++++...+..++|+|
T Consensus 17 ~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 95 (286)
T cd06614 17 PRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ-NKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVVME 95 (286)
T ss_pred ccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch-hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEEEe
Confidence 4566888899999999999999976 689999999986444 55678899999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCC
Q 003158 588 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 667 (843)
Q Consensus 588 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~ 667 (843)
|+++++|.+++.... ..+++..+..++.|++.||.|||+.+ |+|+||+|+||+++.++.++|+|||.+.......
T Consensus 96 ~~~~~~L~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~lH~~g---i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~- 170 (286)
T cd06614 96 YMDGGSLTDIITQNF-VRMNEPQIAYVCREVLQGLEYLHSQN---VIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEK- 170 (286)
T ss_pred ccCCCcHHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCChhhEEEcCCCCEEECccchhhhhccch-
Confidence 999999999997754 46899999999999999999999988 9999999999999999999999999987543221
Q ss_pred CCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCc
Q 003158 668 EGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 723 (843)
Q Consensus 668 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~ 723 (843)
.......++..|+|||.+.+..++.++|||||||++|+|++|+.||....
T Consensus 171 ------~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~ 220 (286)
T cd06614 171 ------SKRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREP 220 (286)
T ss_pred ------hhhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCC
Confidence 11123457889999999998889999999999999999999999997544
No 355
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.4e-36 Score=291.59 Aligned_cols=285 Identities=24% Similarity=0.344 Sum_probs=215.3
Q ss_pred CCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccC--ChhhHHHHHHHHHHHHhccCCcccceeeeeecC-----CcEEE
Q 003158 513 FNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEG--SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE-----GEQML 584 (843)
Q Consensus 513 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~-----~~~~l 584 (843)
.+..+.||.|+||.||...++ +|+.||.|++..- +...-+++.+|+++|..++|.|++..++..... .++|+
T Consensus 55 i~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV 134 (449)
T KOG0664|consen 55 IQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYV 134 (449)
T ss_pred CCCCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHH
Confidence 344678999999999999964 7999999988642 334457899999999999999999998876543 36789
Q ss_pred EEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCC
Q 003158 585 VYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPV 664 (843)
Q Consensus 585 V~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~ 664 (843)
|+|.|. .+|...+- +.++++.+.++-+..||++||+|||+.+ |.||||||.|.|++++..+||+|||+|+..+.
T Consensus 135 ~TELmQ-SDLHKIIV--SPQ~Ls~DHvKVFlYQILRGLKYLHsA~---ILHRDIKPGNLLVNSNCvLKICDFGLARvee~ 208 (449)
T KOG0664|consen 135 LTELMQ-SDLHKIIV--SPQALTPDHVKVFVYQILRGLKYLHTAN---ILHRDIKPGNLLVNSNCILKICDFGLARTWDQ 208 (449)
T ss_pred HHHHHH-hhhhheec--cCCCCCcchhhhhHHHHHhhhHHHhhcc---hhhccCCCccEEeccCceEEecccccccccch
Confidence 999995 58887773 4567888899999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCCcccceeeeeecccCCccCchhccc-CCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhcc
Q 003158 665 PDIEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVID 743 (843)
Q Consensus 665 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 743 (843)
.+ ....+....|..|+|||.+++ ..|+.+.||||+||++.|++.++..|.... ..++++. +.
T Consensus 209 d~------~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~-PiqQL~l----------It 271 (449)
T KOG0664|consen 209 RD------RLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAG-PIEQLQM----------II 271 (449)
T ss_pred hh------hhhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccC-hHHHHHH----------HH
Confidence 43 334455677899999999998 568999999999999999998877776543 3333322 22
Q ss_pred CCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCCCCccCCCCCcc
Q 003158 744 GNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYV 823 (843)
Q Consensus 744 ~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~sa~e~L~Hp~f 823 (843)
..++....+......+-++.-+-..+.+-|+..-+... . .......+..+++.+||.+||.+|++.++++.|+|.
T Consensus 272 dLLGTPs~EaMr~ACEGAk~H~LR~~~k~Ps~~vLYtl-s----S~~~~~heav~~~~~~l~~d~dkris~~~A~~~~~~ 346 (449)
T KOG0664|consen 272 DLLGTPSQEAMKYACEGAKNHVLRAGLRAPDTQRLYKI-A----SPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHRYL 346 (449)
T ss_pred HHhCCCcHHHHHHHhhhhHHHhhccCCCCCCccceeee-c----CCcccchHHHHHHHHHhCCCCcccccHhhhcccccc
Confidence 23344444444444444444334445555555433211 0 001223345678999999999999999999999997
Q ss_pred cC
Q 003158 824 SS 825 (843)
Q Consensus 824 ~~ 825 (843)
..
T Consensus 347 ~e 348 (449)
T KOG0664|consen 347 EE 348 (449)
T ss_pred cc
Confidence 43
No 356
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=100.00 E-value=1.7e-33 Score=305.12 Aligned_cols=244 Identities=30% Similarity=0.466 Sum_probs=190.2
Q ss_pred cCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCC---hhhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEE
Q 003158 511 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 586 (843)
Q Consensus 511 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~ 586 (843)
..|+..+.||+|+||+||+|... +++.||+|.+.... ....+++.+|+++++.++||||++++++|.+.+..++||
T Consensus 15 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~ 94 (307)
T cd06607 15 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLVM 94 (307)
T ss_pred hhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEEH
Confidence 56888899999999999999964 68999999886432 223457889999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCC
Q 003158 587 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 666 (843)
Q Consensus 587 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~ 666 (843)
||++ |++.+++.... ..+++..+..++.|++.||.|||+.+ |+||||+|+||++++++.++|+|||++......
T Consensus 95 e~~~-g~l~~~~~~~~-~~l~~~~~~~~~~ql~~~L~~LH~~~---i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~~- 168 (307)
T cd06607 95 EYCL-GSASDILEVHK-KPLQEVEIAAICHGALQGLAYLHSHE---RIHRDIKAGNILLTEPGTVKLADFGSASLVSPA- 168 (307)
T ss_pred HhhC-CCHHHHHHHcc-cCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCcccEEECCCCCEEEeecCcceecCCC-
Confidence 9996 68877775432 35889999999999999999999998 999999999999999999999999998754321
Q ss_pred CCCcccceeeeeecccCCccCchhcc---cCCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhcc
Q 003158 667 IEGIVPAHVSTVVKGTPGYLDPEYFL---THKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVID 743 (843)
Q Consensus 667 ~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 743 (843)
....++..|+|||++. ...++.++||||||+++|||++|+.||........... +..
T Consensus 169 ----------~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~~~~----------~~~ 228 (307)
T cd06607 169 ----------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYH----------IAQ 228 (307)
T ss_pred ----------CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHHHHH----------Hhc
Confidence 2235778999999985 35688899999999999999999999975543221111 111
Q ss_pred CCCCC-CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 003158 744 GNMGS-YPSECVEKFIKLALKCCQDETDARPSMSEVMR 780 (843)
Q Consensus 744 ~~~~~-~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~ 780 (843)
..... .+..++..+.+++.+||+.+|++||++.+++.
T Consensus 229 ~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 266 (307)
T cd06607 229 NDSPTLSSNDWSDYFRNFVDSCLQKIPQDRPSSEELLK 266 (307)
T ss_pred CCCCCCCchhhCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 11111 12345556666666666666666666666654
No 357
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=100.00 E-value=3e-34 Score=307.04 Aligned_cols=279 Identities=26% Similarity=0.381 Sum_probs=205.0
Q ss_pred CCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCCh-hhHHHHHHHHHHHHhcc-CCcccceeeeeecCCcEEEEEecC
Q 003158 513 FNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLH-HRNLVSLVGYCDEEGEQMLVYEFM 589 (843)
Q Consensus 513 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~-h~nIv~l~~~~~~~~~~~lV~e~~ 589 (843)
|++.+.||+|+||+||+|... +++.||+|++..... .......+|+..+++++ |+||+++++++.+++..++||||+
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYM 80 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEecC
Confidence 567889999999999999975 588999999875332 22334567999999999 999999999999999999999999
Q ss_pred CCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCCCC
Q 003158 590 SNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEG 669 (843)
Q Consensus 590 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~ 669 (843)
+|+|.+++.......+++..+..++.|++.||.|||+.+ ++|+||+|+||++++++.++|+|||.+.......
T Consensus 81 -~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~---i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~--- 153 (283)
T cd07830 81 -EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHG---FFHRDLKPENLLVSGPEVVKIADFGLAREIRSRP--- 153 (283)
T ss_pred -CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCChhhEEEcCCCCEEEeecccceeccCCC---
Confidence 889999997765556899999999999999999999998 9999999999999999999999999997654221
Q ss_pred cccceeeeeecccCCccCchhccc-CCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhccCCCCC
Q 003158 670 IVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGS 748 (843)
Q Consensus 670 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 748 (843)
......++..|+|||.+.. ..++.++|+||||++++||++|+.||....... ...... .. .+.
T Consensus 154 -----~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~-~~~~~~------~~----~~~ 217 (283)
T cd07830 154 -----PYTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEID-QLYKIC------SV----LGT 217 (283)
T ss_pred -----CcCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHH-HHHHHH------Hh----cCC
Confidence 1123457889999998854 557899999999999999999999986544321 111100 01 111
Q ss_pred CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCCCCccCCCCCcc
Q 003158 749 YPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYV 823 (843)
Q Consensus 749 ~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~sa~e~L~Hp~f 823 (843)
...+.+.+...+.. .+...-..++.. . + ....+.......+++++|++.||++|||++|++.||||
T Consensus 218 ~~~~~~~~~~~~~~-~~~~~~~~~~~~-~----~---~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~~~~ 283 (283)
T cd07830 218 PTKQDWPEGYKLAS-KLGFRFPQFAPT-S----L---HQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQHPYF 283 (283)
T ss_pred CChhhhhhHhhhhc-cccccccccccc-c----H---HHHcccCCHHHHHHHHHhcccCcccCCCHHHHhhCCCC
Confidence 11111111111111 111100000000 0 0 11223334556789999999999999999999999997
No 358
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=100.00 E-value=8.1e-34 Score=299.78 Aligned_cols=190 Identities=27% Similarity=0.370 Sum_probs=160.8
Q ss_pred CcccccCCeeEEEEEeC-CCcEEEEEEeccCChhh---HHHHHHHHHHH-HhccCCcccceeeeeecCCcEEEEEecCCC
Q 003158 517 TQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQG---EKEFLTEIQFL-SRLHHRNLVSLVGYCDEEGEQMLVYEFMSN 591 (843)
Q Consensus 517 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~---~~~~~~E~~~l-~~l~h~nIv~l~~~~~~~~~~~lV~e~~~~ 591 (843)
+.||+|+||.||+|... +++.||+|++....... ...+..|..++ ...+|+|++++++++...+..++||||+++
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 81 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG 81 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence 46899999999999964 68999999987543222 23345555544 445899999999999999999999999999
Q ss_pred CCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCCCCcc
Q 003158 592 GTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIV 671 (843)
Q Consensus 592 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~ 671 (843)
++|.+++.... ++++..+..++.|+++||.|||+.+ ++||||+|+||++++++.+||+|||++.....
T Consensus 82 ~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~lH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~------- 149 (260)
T cd05611 82 GDCASLIKTLG--GLPEDWAKQYIAEVVLGVEDLHQRG---IIHRDIKPENLLIDQTGHLKLTDFGLSRNGLE------- 149 (260)
T ss_pred CCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEECCCCcEEEeecccceeccc-------
Confidence 99999996543 5788889999999999999999998 99999999999999999999999999875432
Q ss_pred cceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCC
Q 003158 672 PAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 722 (843)
Q Consensus 672 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~ 722 (843)
.....++..|+|||.+.+..++.++||||||+++|||++|..||...
T Consensus 150 ----~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~ 196 (260)
T cd05611 150 ----NKKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAE 196 (260)
T ss_pred ----cccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCC
Confidence 12335788999999999888899999999999999999999999644
No 359
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=7.1e-34 Score=331.57 Aligned_cols=264 Identities=28% Similarity=0.477 Sum_probs=218.9
Q ss_pred HHHHHHcCCCCCCcccccCCeeEEEEEeC----C----CcEEEEEEeccCChh-hHHHHHHHHHHHHhc-cCCcccceee
Q 003158 505 EMALATNNFNSSTQIGQGGYGKVYKGILP----D----GTVVAVKRAQEGSLQ-GEKEFLTEIQFLSRL-HHRNLVSLVG 574 (843)
Q Consensus 505 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~----~----~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l-~h~nIv~l~~ 574 (843)
.++...++..+.+.||+|.||.||+|... . ...||||.++..... ..+.+..|+++|+.+ +|+||+.++|
T Consensus 290 ~~e~~~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG 369 (609)
T KOG0200|consen 290 KWEIPRENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLG 369 (609)
T ss_pred ceeechhhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhhee
Confidence 46666677777789999999999999843 1 457999999865433 457899999999998 6999999999
Q ss_pred eeecCCcEEEEEecCCCCCHHHHHhhcC------------C--CCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCC
Q 003158 575 YCDEEGEQMLVYEFMSNGTLRDQLSAKS------------K--EPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKA 640 (843)
Q Consensus 575 ~~~~~~~~~lV~e~~~~gsL~~~l~~~~------------~--~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp 640 (843)
+|...+..++|+||+..|+|.++++..+ . ..+...+.+.++.|||.|++||++.. +|||||.+
T Consensus 370 ~~t~~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~---~vHRDLAa 446 (609)
T KOG0200|consen 370 ACTQDGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVP---CVHRDLAA 446 (609)
T ss_pred eeccCCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCC---ccchhhhh
Confidence 9999999999999999999999998755 0 23888999999999999999999998 99999999
Q ss_pred CcEEEcCCCcEEEeeccccccCCCCCCCCcccceeeeeecc--cCCccCchhcccCCCCchhhhHHHHHHHHHHHh-CCC
Q 003158 641 SNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKG--TPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQ 717 (843)
Q Consensus 641 ~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~g--t~~y~aPE~~~~~~~~~~sDvwS~G~~l~ellt-g~~ 717 (843)
+|||+.++..+||+|||+|+.....+.. ......| ...|||||.+....++.+|||||||++||||+| |..
T Consensus 447 RNVLi~~~~~~kIaDFGlar~~~~~~~y------~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~ 520 (609)
T KOG0200|consen 447 RNVLITKNKVIKIADFGLARDHYNKDYY------RTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGT 520 (609)
T ss_pred hhEEecCCCEEEEccccceeccCCCCce------EecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCC
Confidence 9999999999999999999965543321 1111122 345999999999999999999999999999999 889
Q ss_pred CCCCCcchHHHHHHHhhcccchhhccCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhh
Q 003158 718 PISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIW 786 (843)
Q Consensus 718 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~ 786 (843)
||.......+. +..+.++.+...|..|.++++++|..||+.+|++||++.++.+.++...
T Consensus 521 PYp~~~~~~~l---------~~~l~~G~r~~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~~l 580 (609)
T KOG0200|consen 521 PYPGIPPTEEL---------LEFLKEGNRMEQPEHCSDEIYDLMKSCWNADPEDRPTFSECVEFFEKHL 580 (609)
T ss_pred CCCCCCcHHHH---------HHHHhcCCCCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHHHHHH
Confidence 99753211111 1134556677789999999999999999999999999999999999854
No 360
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=100.00 E-value=2.2e-34 Score=316.96 Aligned_cols=280 Identities=22% Similarity=0.366 Sum_probs=207.7
Q ss_pred HHcCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccC--ChhhHHHHHHHHHHHHhccCCcccceeeeeecCCc----
Q 003158 509 ATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEG--SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGE---- 581 (843)
Q Consensus 509 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~---- 581 (843)
..++|++.+.||+|+||.||+|... +++.||+|++... .....+.+.+|+.+++.++|+||+++++++...+.
T Consensus 13 ~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07851 13 VPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDF 92 (343)
T ss_pred ccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhcccccccc
Confidence 3568999999999999999999975 6889999998643 22234567889999999999999999998866554
Q ss_pred --EEEEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeecccc
Q 003158 582 --QMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLS 659 (843)
Q Consensus 582 --~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla 659 (843)
.++|+||+ +++|.+++.. ..+++..++.++.|+++||.|||+.+ |+||||||+||++++++.+||+|||++
T Consensus 93 ~~~~lv~e~~-~~~L~~~~~~---~~l~~~~~~~~~~ql~~aL~~LH~~g---i~H~dlkp~Nill~~~~~~kL~dfg~~ 165 (343)
T cd07851 93 QDVYLVTHLM-GADLNNIVKC---QKLSDDHIQFLVYQILRGLKYIHSAG---IIHRDLKPSNIAVNEDCELKILDFGLA 165 (343)
T ss_pred ccEEEEEecC-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEECCCCCEEEcccccc
Confidence 89999999 6799999864 35899999999999999999999998 999999999999999999999999999
Q ss_pred ccCCCCCCCCcccceeeeeecccCCccCchhccc-CCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccc
Q 003158 660 RLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMM 738 (843)
Q Consensus 660 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~ 738 (843)
...... .....++..|+|||.+.+ ..++.++|||||||++|||++|+.||...... ..+.....
T Consensus 166 ~~~~~~----------~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~-~~~~~i~~---- 230 (343)
T cd07851 166 RHTDDE----------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHI-DQLKRIMN---- 230 (343)
T ss_pred cccccc----------ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHH----
Confidence 765321 123357888999999875 46788999999999999999999999755432 22221110
Q ss_pred hhhccCCCCCCCHHHHHHHHHHH--HHhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCCCCcc
Q 003158 739 FSVIDGNMGSYPSECVEKFIKLA--LKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSS 816 (843)
Q Consensus 739 ~~~~~~~~~~~~~~~~~~l~~l~--~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~sa~e 816 (843)
. .+..++.....+..-. ..+-......++.+.++ .+..+..+.+++.+||..||++|||++|
T Consensus 231 --~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~s~~l~dli~~~l~~~P~~Rpt~~e 294 (343)
T cd07851 231 --L----VGTPDEELLQKISSESARNYIQSLPQMPKKDFKEV----------FSGANPLAIDLLEKMLVLDPDKRITAAE 294 (343)
T ss_pred --h----cCCCCHHHHhhccchhHHHHHHhccccCCCCHHHH----------hccCCHHHHHHHHHhCCCChhhCCCHHH
Confidence 0 1112222222111000 00000011112222221 1223556678999999999999999999
Q ss_pred CCCCCcccCC
Q 003158 817 MLKHPYVSSD 826 (843)
Q Consensus 817 ~L~Hp~f~~~ 826 (843)
+++||||..-
T Consensus 295 ll~h~~~~~~ 304 (343)
T cd07851 295 ALAHPYLAEY 304 (343)
T ss_pred HhcCCCcccc
Confidence 9999999653
No 361
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=100.00 E-value=1.5e-33 Score=296.79 Aligned_cols=201 Identities=30% Similarity=0.514 Sum_probs=176.6
Q ss_pred CCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCCh--hhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEEec
Q 003158 512 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 588 (843)
Q Consensus 512 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e~ 588 (843)
+|++.+.||+|+||.||++... +++.||+|++..... ...+++.+|+++++.++|+|++++++.+...+..++|+||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~ 80 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEY 80 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEe
Confidence 5778899999999999999965 689999999876433 4456789999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcC--CCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCC
Q 003158 589 MSNGTLRDQLSAKS--KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 666 (843)
Q Consensus 589 ~~~gsL~~~l~~~~--~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~ 666 (843)
+++++|.+++.... ...+++..+..++.++++||.|||+.+ ++|+||+|+||++++++.++|+|||.+.......
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~---~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~ 157 (258)
T cd08215 81 ADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRK---ILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTV 157 (258)
T ss_pred cCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCC---EecccCChHHeEEcCCCcEEECCccceeecccCc
Confidence 99999999997643 467899999999999999999999998 9999999999999999999999999997654321
Q ss_pred CCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCC
Q 003158 667 IEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 722 (843)
Q Consensus 667 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~ 722 (843)
.......|++.|+|||...+..++.++||||+|+++++|++|+.||...
T Consensus 158 -------~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~ 206 (258)
T cd08215 158 -------DLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGE 206 (258)
T ss_pred -------ceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCC
Confidence 1223346888999999999888999999999999999999999998654
No 362
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=100.00 E-value=1e-33 Score=303.85 Aligned_cols=199 Identities=29% Similarity=0.412 Sum_probs=165.3
Q ss_pred CCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCC-hhhHHHHHHHHHHHHhcc-CCcccceeeeeecCCcEEEEEec
Q 003158 512 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLH-HRNLVSLVGYCDEEGEQMLVYEF 588 (843)
Q Consensus 512 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~-h~nIv~l~~~~~~~~~~~lV~e~ 588 (843)
+|+..+.||+|+||.||++... +++.||+|.+.... ......+.+|+.++.++. |+||+++++++..++..+++|||
T Consensus 5 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e~ 84 (288)
T cd06616 5 DLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICMEL 84 (288)
T ss_pred HhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEec
Confidence 4556678999999999999964 68999999987533 234567889999999996 99999999999999999999999
Q ss_pred CCCCCHHHHH---hhcCCCCcchhHHHHHHHHHHHHHHHHhcC-CCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCC
Q 003158 589 MSNGTLRDQL---SAKSKEPLGFAMRLSIALGSSRGILYLHTE-ADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPV 664 (843)
Q Consensus 589 ~~~gsL~~~l---~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~-~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~ 664 (843)
+. +++.++. .......+++..+..++.|+++||+|||+. + |+||||||+||++++++.+||+|||+++....
T Consensus 85 ~~-~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~---i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~ 160 (288)
T cd06616 85 MD-ISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELK---IIHRDVKPSNILLDRNGNIKLCDFGISGQLVD 160 (288)
T ss_pred cc-CCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCC---eeccCCCHHHEEEccCCcEEEeecchhHHhcc
Confidence 85 4665543 233345689999999999999999999975 6 99999999999999999999999999975432
Q ss_pred CCCCCcccceeeeeecccCCccCchhcccC---CCCchhhhHHHHHHHHHHHhCCCCCCCC
Q 003158 665 PDIEGIVPAHVSTVVKGTPGYLDPEYFLTH---KLTDKSDVYSLGVVFLELLTGMQPISHG 722 (843)
Q Consensus 665 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~sDvwS~G~~l~elltg~~pf~~~ 722 (843)
.. ......|+..|+|||++.+. .++.++|||||||++|||++|+.||...
T Consensus 161 ~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~ 213 (288)
T cd06616 161 SI--------AKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKW 213 (288)
T ss_pred CC--------ccccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhc
Confidence 11 11233578899999999876 6889999999999999999999999643
No 363
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=100.00 E-value=4.9e-34 Score=290.40 Aligned_cols=268 Identities=23% Similarity=0.331 Sum_probs=224.4
Q ss_pred HHHHHHHHcCCCCCCcccccCCeeEEEEEeCC------CcEEEEEEeccCCh-hhHHHHHHHHHHHHhccCCcccceeee
Q 003158 503 YGEMALATNNFNSSTQIGQGGYGKVYKGILPD------GTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGY 575 (843)
Q Consensus 503 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~------~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~l~~~ 575 (843)
..++.+...+++....+-+|.||.||.|.|.+ .+.|-||.++.... .....+..|.-.+..+.|||+.++.++
T Consensus 276 ~~~l~v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V 355 (563)
T KOG1024|consen 276 LQELTVQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGV 355 (563)
T ss_pred HHhhhhhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEE
Confidence 34677778889999999999999999998653 34577787765432 334678889999999999999999999
Q ss_pred eec-CCcEEEEEecCCCCCHHHHHhh------cCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCC
Q 003158 576 CDE-EGEQMLVYEFMSNGTLRDQLSA------KSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHK 648 (843)
Q Consensus 576 ~~~-~~~~~lV~e~~~~gsL~~~l~~------~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~ 648 (843)
+.+ ....+++|.++.-|+|..++.. ...+.+...+...++.|++.|++|||+++ |||.||.++|+++|+.
T Consensus 356 ~ie~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~---ViHkDiAaRNCvIdd~ 432 (563)
T KOG1024|consen 356 SIEDYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHG---VIHKDIAARNCVIDDQ 432 (563)
T ss_pred EeeccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcC---cccchhhhhcceehhh
Confidence 854 4677999999999999999972 34456788888999999999999999999 9999999999999999
Q ss_pred CcEEEeeccccccCCCCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHh-CCCCCCCCcchHH
Q 003158 649 FTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVR 727 (843)
Q Consensus 649 ~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~ellt-g~~pf~~~~~~~~ 727 (843)
.++||+|=.+++.+...++... .........||+||.+....|+.++||||||++||||+| |+.||..-+..+
T Consensus 433 LqVkltDsaLSRDLFP~DYhcL-----GDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDPfE- 506 (563)
T KOG1024|consen 433 LQVKLTDSALSRDLFPGDYHCL-----GDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDPFE- 506 (563)
T ss_pred eeEEeccchhccccCccccccc-----CCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCHHH-
Confidence 9999999999998876664332 223345678999999999999999999999999999999 999997655321
Q ss_pred HHHHHhhcccchhhccCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhh
Q 003158 728 EVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNM 788 (843)
Q Consensus 728 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~ 788 (843)
....+.++.+...|-+|++++..+|..||...|++||++++++.-|.++..+
T Consensus 507 ---------m~~ylkdGyRlaQP~NCPDeLf~vMacCWallpeeRPsf~Qlv~cLseF~~q 558 (563)
T KOG1024|consen 507 ---------MEHYLKDGYRLAQPFNCPDELFTVMACCWALLPEERPSFSQLVICLSEFHTQ 558 (563)
T ss_pred ---------HHHHHhccceecCCCCCcHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHHHH
Confidence 1224567777788999999999999999999999999999999999887654
No 364
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-35 Score=303.76 Aligned_cols=273 Identities=25% Similarity=0.395 Sum_probs=210.5
Q ss_pred HHHHHHcCCCCCCcccccCCeeEEEEE-eCCCcEEEEEEeccC-Chhh------HHHHHHHHHHHHhccCCcccceeeee
Q 003158 505 EMALATNNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQEG-SLQG------EKEFLTEIQFLSRLHHRNLVSLVGYC 576 (843)
Q Consensus 505 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~-~~~~------~~~~~~E~~~l~~l~h~nIv~l~~~~ 576 (843)
+-....++|-.++.||+|||+.||+|. +...+.||||+-... .... .+...+|.++-+.+.||.||++|+||
T Consensus 457 DHptLn~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyf 536 (775)
T KOG1151|consen 457 DHPTLNDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYF 536 (775)
T ss_pred cCcchHHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeee
Confidence 334456788889999999999999999 457899999985421 2221 24578899999999999999999999
Q ss_pred e-cCCcEEEEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEc---CCCcEE
Q 003158 577 D-EEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLD---HKFTAK 652 (843)
Q Consensus 577 ~-~~~~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~---~~~~~k 652 (843)
. +.+.+|-|+|||+|.+|+-||+.+. .+++.+++.|+.||+.||.||.+. ++||||-||||.|||+. ..|.+|
T Consensus 537 slDtdsFCTVLEYceGNDLDFYLKQhk--lmSEKEARSIiMQiVnAL~YLNEi-kpPIIHYDLKPgNILLv~GtacGeIK 613 (775)
T KOG1151|consen 537 SLDTDSFCTVLEYCEGNDLDFYLKQHK--LMSEKEARSIIMQIVNALKYLNEI-KPPIIHYDLKPGNILLVNGTACGEIK 613 (775)
T ss_pred eeccccceeeeeecCCCchhHHHHhhh--hhhHHHHHHHHHHHHHHHHHHhcc-CCCeeeeccCCccEEEecCcccceeE
Confidence 5 5568899999999999999997653 488999999999999999999987 58899999999999995 457899
Q ss_pred EeeccccccCCCCCCCCcccceeeeeecccCCccCchhcccC----CCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHH
Q 003158 653 VADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTH----KLTDKSDVYSLGVVFLELLTGMQPISHGKNIVRE 728 (843)
Q Consensus 653 l~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~ 728 (843)
|.|||+++.++...++.......+.-..||.+|++||.+.-+ +.+.++||||+||++|.++.|+.||.......+.
T Consensus 614 ITDFGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQdI 693 (775)
T KOG1151|consen 614 ITDFGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQDI 693 (775)
T ss_pred eeecchhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhHHHH
Confidence 999999999886655444444555667899999999998643 5788999999999999999999999865432222
Q ss_pred HHHHhhcccchhhccCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCC
Q 003158 729 VNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKE 808 (843)
Q Consensus 729 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp 808 (843)
+.. .. ++....-.|| .-|..+..+.+||++||.+.-
T Consensus 694 Lqe----NT---IlkAtEVqFP-------------------------------------~KPvVsseAkaFIRRCLaYRK 729 (775)
T KOG1151|consen 694 LQE----NT---ILKATEVQFP-------------------------------------PKPVVSSEAKAFIRRCLAYRK 729 (775)
T ss_pred Hhh----hc---hhcceeccCC-------------------------------------CCCccCHHHHHHHHHHHHhhh
Confidence 111 11 1111101111 112234445578888888888
Q ss_pred CCCCCCccCCCCCccc
Q 003158 809 ETPPSSSSMLKHPYVS 824 (843)
Q Consensus 809 ~~R~sa~e~L~Hp~f~ 824 (843)
++|+...|+-.||||.
T Consensus 730 eDR~DV~qLA~dpyll 745 (775)
T KOG1151|consen 730 EDRIDVQQLACDPYLL 745 (775)
T ss_pred hhhhhHHHHccCcccc
Confidence 8888888888888883
No 365
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=100.00 E-value=5e-33 Score=291.55 Aligned_cols=200 Identities=34% Similarity=0.511 Sum_probs=177.0
Q ss_pred CCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCChhhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEEecCC
Q 003158 512 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMS 590 (843)
Q Consensus 512 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e~~~ 590 (843)
.|+..+.||+|++|.||++... +++.+++|++........+.+.+|+++++.++|+||+++++++..+...++++||++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~~~ 80 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFCS 80 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEecCC
Confidence 3777899999999999999975 689999999987655566789999999999999999999999999999999999999
Q ss_pred CCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCCCCc
Q 003158 591 NGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGI 670 (843)
Q Consensus 591 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~ 670 (843)
+++|.+++.... ..+++..+..++.|+++||.|||+.+ ++||||+|+||++++++.++|+|||.+........
T Consensus 81 ~~~L~~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lh~~~---i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~--- 153 (253)
T cd05122 81 GGSLKDLLKSTN-QTLTESQIAYVCKELLKGLEYLHSNG---IIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKA--- 153 (253)
T ss_pred CCcHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHhhcCC---EecCCCCHHHEEEccCCeEEEeecccccccccccc---
Confidence 999999986643 46899999999999999999999988 99999999999999999999999999876543210
Q ss_pred ccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCc
Q 003158 671 VPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 723 (843)
Q Consensus 671 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~ 723 (843)
.....++..|+|||.+.+..++.++||||||+++|+|++|+.||....
T Consensus 154 -----~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~ 201 (253)
T cd05122 154 -----RNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELP 201 (253)
T ss_pred -----ccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCc
Confidence 234468889999999998889999999999999999999999997543
No 366
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=100.00 E-value=8.4e-35 Score=276.30 Aligned_cols=278 Identities=16% Similarity=0.332 Sum_probs=211.1
Q ss_pred HcCCCCCCcccccCCeeEEEEE-eCCCcEEEEEEeccCChhhHHHHHHHHHHHHhcc-CCcccceeeeeecC--CcEEEE
Q 003158 510 TNNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLH-HRNLVSLVGYCDEE--GEQMLV 585 (843)
Q Consensus 510 ~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~nIv~l~~~~~~~--~~~~lV 585 (843)
.++|++.+++|+|.++.||.|. ..+.+.++||+++. -..+.+.+|+++|+.+. ||||+++++...+. ....||
T Consensus 37 ~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKP---VkkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaLi 113 (338)
T KOG0668|consen 37 QDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKP---VKKKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPSLI 113 (338)
T ss_pred cchHHHHHHHcCccHhhHhcccccCCCceEEEeeech---HHHHHHHHHHHHHHhccCCCCeeehhhhhcCccccCchhH
Confidence 5689999999999999999999 56789999999974 23467899999999997 99999999998664 467899
Q ss_pred EecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCC-cEEEeeccccccCCC
Q 003158 586 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKF-TAKVADFGLSRLAPV 664 (843)
Q Consensus 586 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~-~~kl~DfGla~~~~~ 664 (843)
+||+.+-+...+.. .+...++..+..++++||.|+|++| |+|||+||.||++|... .++|+|+|+|.+...
T Consensus 114 FE~v~n~Dfk~ly~-----tl~d~dIryY~~elLkALdyCHS~G---ImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYHp 185 (338)
T KOG0668|consen 114 FEYVNNTDFKQLYP-----TLTDYDIRYYIYELLKALDYCHSMG---IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHP 185 (338)
T ss_pred hhhhccccHHHHhh-----hhchhhHHHHHHHHHHHHhHHHhcC---cccccCCcceeeechhhceeeeeecchHhhcCC
Confidence 99999988877663 3677788899999999999999999 99999999999999654 699999999998764
Q ss_pred CCCCCcccceeeeeecccCCccCchhccc-CCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhcc
Q 003158 665 PDIEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVID 743 (843)
Q Consensus 665 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 743 (843)
.. .......+..|--||.+.. ..|+.+-|+|||||++..|+..+.||+.+.+-.+++..+...-..
T Consensus 186 ~~--------eYnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt----- 252 (338)
T KOG0668|consen 186 GK--------EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGT----- 252 (338)
T ss_pred Cc--------eeeeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhCh-----
Confidence 32 2233445677889999986 568899999999999999999999999888766666543211100
Q ss_pred CCCCCCCHHHHHHHHH-HHHHhcccCCCCCCCHHHHHHHHHH--hhhhCCC-----CCCCCCccccCCCCCCCCCCCCCc
Q 003158 744 GNMGSYPSECVEKFIK-LALKCCQDETDARPSMSEVMRELES--IWNMMPE-----SDTKTPEFINSEHTSKEETPPSSS 815 (843)
Q Consensus 744 ~~~~~~~~~~~~~l~~-l~~~c~~~~p~~RPs~~~vl~~L~~--~~~~~~~-----~~~~~~dll~~~L~~dp~~R~sa~ 815 (843)
+++.. +...-+. --|.+.+++..-.+ +...... ..+++.||+.++|.+|-.+|+||+
T Consensus 253 -----------~el~~Yl~KY~i~----Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTak 317 (338)
T KOG0668|consen 253 -----------DELYAYLNKYQID----LDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAK 317 (338)
T ss_pred -----------HHHHHHHHHHccC----CChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchH
Confidence 01111 1111111 12233333322111 1111111 246678999999999999999999
Q ss_pred cCCCCCcccCC
Q 003158 816 SMLKHPYVSSD 826 (843)
Q Consensus 816 e~L~Hp~f~~~ 826 (843)
||+.||||..-
T Consensus 318 Eam~HpyF~~~ 328 (338)
T KOG0668|consen 318 EAMAHPYFAPV 328 (338)
T ss_pred HHhcCchHHHH
Confidence 99999999653
No 367
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=100.00 E-value=2.1e-33 Score=295.65 Aligned_cols=247 Identities=25% Similarity=0.399 Sum_probs=197.5
Q ss_pred CCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCC--hhhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEEec
Q 003158 512 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 588 (843)
Q Consensus 512 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e~ 588 (843)
+|++.+.||+|+||.||++... +++.+|+|.+.... .....++.+|+++++.++|+||+++++++.+....++||||
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEY 80 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehh
Confidence 4788899999999999999854 68899999987533 23345678899999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhc--CCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCC
Q 003158 589 MSNGTLRDQLSAK--SKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 666 (843)
Q Consensus 589 ~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~ 666 (843)
+++++|.+++... ....+++..++.++.|+++||+|||+.+ ++|+||+|+||++++++.+||+|||++......
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~---i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~- 156 (256)
T cd08530 81 APFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQK---ILHRDLKSANILLVANDLVKIGDLGISKVLKKN- 156 (256)
T ss_pred cCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCC---cccCCCCcceEEEecCCcEEEeeccchhhhccC-
Confidence 9999999998662 2346889999999999999999999999 999999999999999999999999999766432
Q ss_pred CCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhccCCC
Q 003158 667 IEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNM 746 (843)
Q Consensus 667 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 746 (843)
......++..|+|||.+.+..++.++|+||+|+++|||++|+.||...... .... .+..+..
T Consensus 157 --------~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~-~~~~---------~~~~~~~ 218 (256)
T cd08530 157 --------MAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQ-DLRY---------KVQRGKY 218 (256)
T ss_pred --------CcccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-HHHH---------HHhcCCC
Confidence 112235788999999999999999999999999999999999999754421 1111 1112223
Q ss_pred CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 003158 747 GSYPSECVEKFIKLALKCCQDETDARPSMSEVMR 780 (843)
Q Consensus 747 ~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~ 780 (843)
+..+..+..++.+++.+|+..+|++||++.++++
T Consensus 219 ~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 252 (256)
T cd08530 219 PPIPPIYSQDLQNFIRSMLQVKPKLRPNCDKILA 252 (256)
T ss_pred CCCchhhCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 3344455666677777777766666666666553
No 368
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=100.00 E-value=5e-33 Score=292.83 Aligned_cols=202 Identities=29% Similarity=0.449 Sum_probs=176.6
Q ss_pred CCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCCh--hhHHHHHHHHHHHHhccCCcccceeeeeecC--CcEEEEE
Q 003158 512 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE--GEQMLVY 586 (843)
Q Consensus 512 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~--~~~~lV~ 586 (843)
+|+..+.||+|++|.||+|... +++.|++|++..... ...+.+.+|++++++++|+||+++++.+.+. ...++|+
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 80 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFL 80 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEE
Confidence 4777899999999999999976 689999999876443 3457889999999999999999999999888 8899999
Q ss_pred ecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCC
Q 003158 587 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 666 (843)
Q Consensus 587 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~ 666 (843)
||+++++|.+++.... .+++..++.++.|+++||+|||+.+ ++|+||+|+||+++.++.++|+|||.+.......
T Consensus 81 e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~l~~~l~~lh~~~---~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~ 155 (260)
T cd06606 81 EYVSGGSLSSLLKKFG--KLPEPVIRKYTRQILEGLAYLHSNG---IVHRDIKGANILVDSDGVVKLADFGCAKRLGDIE 155 (260)
T ss_pred EecCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEEcCCCCEEEcccccEEeccccc
Confidence 9999999999997654 6899999999999999999999998 9999999999999999999999999998765432
Q ss_pred CCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCc
Q 003158 667 IEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 723 (843)
Q Consensus 667 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~ 723 (843)
.. .......++..|+|||.+.+...+.++||||||+++++|++|..||....
T Consensus 156 ~~-----~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~ 207 (260)
T cd06606 156 TG-----EGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELG 207 (260)
T ss_pred cc-----ccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 10 01234568889999999998889999999999999999999999997654
No 369
>PHA02882 putative serine/threonine kinase; Provisional
Probab=100.00 E-value=3.6e-33 Score=300.42 Aligned_cols=264 Identities=14% Similarity=0.165 Sum_probs=188.0
Q ss_pred HcCCCCCCcccccCCeeEEEEEeCC----CcEEEEEEeccCChh--hH---------HHHHHHHHHHHhccCCcccceee
Q 003158 510 TNNFNSSTQIGQGGYGKVYKGILPD----GTVVAVKRAQEGSLQ--GE---------KEFLTEIQFLSRLHHRNLVSLVG 574 (843)
Q Consensus 510 ~~~~~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~--~~---------~~~~~E~~~l~~l~h~nIv~l~~ 574 (843)
.++|.+.+.||+|+||+||+|...+ +..+|+|+....... .+ .....+...+..+.|++|+++++
T Consensus 11 ~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~ 90 (294)
T PHA02882 11 GKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYG 90 (294)
T ss_pred CCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEE
Confidence 4689999999999999999999653 456777754322211 11 11223344556678999999999
Q ss_pred eeecCC----cEEEEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCc
Q 003158 575 YCDEEG----EQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFT 650 (843)
Q Consensus 575 ~~~~~~----~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~ 650 (843)
++.... ..++++|++. .++.+.+.... ..++..+..++.|+++||+|||+.+ |+||||||+|||++.++.
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~---iiHrDiKp~Nill~~~~~ 164 (294)
T PHA02882 91 CGSFKRCRMYYRFILLEKLV-ENTKEIFKRIK--CKNKKLIKNIMKDMLTTLEYIHEHG---ISHGDIKPENIMVDGNNR 164 (294)
T ss_pred eeeEecCCceEEEEEEehhc-cCHHHHHHhhc--cCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCc
Confidence 765443 3478888873 47777765432 3567788899999999999999998 999999999999999999
Q ss_pred EEEeeccccccCCCCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHH
Q 003158 651 AKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVN 730 (843)
Q Consensus 651 ~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~ 730 (843)
++|+|||+|+....................||+.|+|||++.+..++.++|||||||++|||++|+.||...........
T Consensus 165 ~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~~~ 244 (294)
T PHA02882 165 GYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNLIH 244 (294)
T ss_pred EEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchHHHH
Confidence 99999999986643211111011112334699999999999999999999999999999999999999976532221111
Q ss_pred HHhhcccchhhccCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 003158 731 IAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMREL 782 (843)
Q Consensus 731 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L 782 (843)
.. .......+..+.. ....++..+.+++..||+.+|++||++.++.+.+
T Consensus 245 ~~-~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~ 293 (294)
T PHA02882 245 AA-KCDFIKRLHEGKI--KIKNANKFIYDFIECVTKLSYEEKPDYDALIKIF 293 (294)
T ss_pred Hh-HHHHHHHhhhhhh--ccCCCCHHHHHHHHHHHhCCCCCCCCHHHHHHhh
Confidence 10 0000111111111 1223467789999999999999999999998764
No 370
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=100.00 E-value=6.7e-33 Score=293.53 Aligned_cols=203 Identities=29% Similarity=0.430 Sum_probs=170.8
Q ss_pred cCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccC-----ChhhHHHHHHHHHHHHhccCCcccceeeeeecC--CcE
Q 003158 511 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEG-----SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE--GEQ 582 (843)
Q Consensus 511 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~-----~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~--~~~ 582 (843)
.+|++.+.||+|+||.||+|... +++.||+|.+... .....+.+.+|++++++++|+||+++++++.+. +..
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKL 81 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEE
Confidence 47888999999999999999964 6899999987532 122345788999999999999999999998654 457
Q ss_pred EEEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccC
Q 003158 583 MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLA 662 (843)
Q Consensus 583 ~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~ 662 (843)
++||||+++++|.+++.... .+++...+.++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||+++..
T Consensus 82 ~~v~e~~~~~~L~~~~~~~~--~l~~~~~~~~~~~i~~al~~LH~~~---i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~ 156 (264)
T cd06653 82 SIFVEYMPGGSIKDQLKAYG--ALTENVTRRYTRQILQGVSYLHSNM---IVHRDIKGANILRDSAGNVKLGDFGASKRI 156 (264)
T ss_pred EEEEEeCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEEcCCCCEEECcccccccc
Confidence 89999999999999986543 4788889999999999999999999 999999999999999999999999999865
Q ss_pred CCCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCC
Q 003158 663 PVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 722 (843)
Q Consensus 663 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~ 722 (843)
...... ........++..|+|||.+.+..++.++|||||||++|||++|+.||...
T Consensus 157 ~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~ 212 (264)
T cd06653 157 QTICMS----GTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEY 212 (264)
T ss_pred cccccc----CccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCcc
Confidence 321110 11112345889999999999888999999999999999999999999643
No 371
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=100.00 E-value=6.5e-33 Score=301.86 Aligned_cols=245 Identities=29% Similarity=0.469 Sum_probs=194.4
Q ss_pred CCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCCh---hhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEEec
Q 003158 513 FNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 588 (843)
Q Consensus 513 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e~ 588 (843)
|+..+.||+|+||.||+|... ++..||+|.+..... ...+++.+|+++++.++|+|++++++++.++...++||||
T Consensus 27 f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 106 (317)
T cd06635 27 FTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVMEY 106 (317)
T ss_pred hhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEEeC
Confidence 666789999999999999964 689999999864322 2345788999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCCC
Q 003158 589 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 668 (843)
Q Consensus 589 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 668 (843)
+. |+|.+++... ..++++..+..++.|++.||.|||+.+ |+||||+|+||+++.++.+||+|||++......
T Consensus 107 ~~-g~l~~~~~~~-~~~l~~~~~~~i~~~i~~~l~~lH~~~---i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~~--- 178 (317)
T cd06635 107 CL-GSASDLLEVH-KKPLQEVEIAAITHGALQGLAYLHSHN---MIHRDIKAGNILLTEPGQVKLADFGSASIASPA--- 178 (317)
T ss_pred CC-CCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCcccEEECCCCCEEEecCCCccccCCc---
Confidence 96 5888877543 345889999999999999999999999 999999999999999999999999998754321
Q ss_pred CcccceeeeeecccCCccCchhcc---cCCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhccCC
Q 003158 669 GIVPAHVSTVVKGTPGYLDPEYFL---THKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGN 745 (843)
Q Consensus 669 ~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 745 (843)
....|+..|+|||++. ...++.++|||||||++|||++|+.||.......... .+....
T Consensus 179 --------~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~----------~~~~~~ 240 (317)
T cd06635 179 --------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALY----------HIAQNE 240 (317)
T ss_pred --------ccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHH----------HHHhcc
Confidence 2235788999999984 4568889999999999999999999987543221111 111111
Q ss_pred C-CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 003158 746 M-GSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELE 783 (843)
Q Consensus 746 ~-~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~ 783 (843)
. ...+..++..+.+++.+||+.+|.+||++.++++..-
T Consensus 241 ~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~ 279 (317)
T cd06635 241 SPTLQSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHMF 279 (317)
T ss_pred CCCCCCccccHHHHHHHHHHccCCcccCcCHHHHHhChh
Confidence 1 1223345567788888888888888888888776544
No 372
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=100.00 E-value=8.9e-34 Score=309.83 Aligned_cols=286 Identities=25% Similarity=0.377 Sum_probs=207.3
Q ss_pred HHHHHHcCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCC--hhhHHHHHHHHHHHHhccCCcccceeeeeec-CC
Q 003158 505 EMALATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDE-EG 580 (843)
Q Consensus 505 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~-~~ 580 (843)
++...+++|++.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|+++++.++||||+++++++.. ..
T Consensus 4 ~~~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~ 83 (328)
T cd07856 4 TVFEITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLE 83 (328)
T ss_pred ceeccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCC
Confidence 34456789999999999999999999854 79999999876422 2234678899999999999999999999865 56
Q ss_pred cEEEEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccc
Q 003158 581 EQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSR 660 (843)
Q Consensus 581 ~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~ 660 (843)
..++||||+ +++|.+++.. .++++.....++.|+++||.|||+.+ |+||||||+||++++++.++|+|||.+.
T Consensus 84 ~~~lv~e~~-~~~L~~~~~~---~~~~~~~~~~~~~ql~~aL~~LH~~~---iiH~dl~p~Nili~~~~~~~l~dfg~~~ 156 (328)
T cd07856 84 DIYFVTELL-GTDLHRLLTS---RPLEKQFIQYFLYQILRGLKYVHSAG---VVHRDLKPSNILINENCDLKICDFGLAR 156 (328)
T ss_pred cEEEEeehh-ccCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEeECCCCCEEeCcccccc
Confidence 789999999 6799988853 34778888899999999999999999 9999999999999999999999999987
Q ss_pred cCCCCCCCCcccceeeeeecccCCccCchhccc-CCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccch
Q 003158 661 LAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMF 739 (843)
Q Consensus 661 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~ 739 (843)
..... .....++..|+|||.+.+ ..++.++|||||||++|||++|+.||........ ...
T Consensus 157 ~~~~~----------~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~-~~~-------- 217 (328)
T cd07856 157 IQDPQ----------MTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQ-FSI-------- 217 (328)
T ss_pred ccCCC----------cCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH-HHH--------
Confidence 54321 122356788999999876 5689999999999999999999999965432111 100
Q ss_pred hhccCCCCCCCHHHHHHHHH-HHHHhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCCCCccCC
Q 003158 740 SVIDGNMGSYPSECVEKFIK-LALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSML 818 (843)
Q Consensus 740 ~~~~~~~~~~~~~~~~~l~~-l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~sa~e~L 818 (843)
+....+..+++....+.. -...++..-+...+.. .....+..+....+++.+|++.+|++|+|++|++
T Consensus 218 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell 286 (328)
T cd07856 218 --ITDLLGTPPDDVINTICSENTLRFVQSLPKREPVP---------FSEKFKNADPSAIDLLEKMLVFDPQKRISAAEAL 286 (328)
T ss_pred --HHHHhCCCCHHHHHhccchhhHHHHhhccccCCCc---------HHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHh
Confidence 000111122222211100 0000111111111100 0011233345566899999999999999999999
Q ss_pred CCCcccCCC
Q 003158 819 KHPYVSSDV 827 (843)
Q Consensus 819 ~Hp~f~~~~ 827 (843)
.||||....
T Consensus 287 ~~~~~~~~~ 295 (328)
T cd07856 287 AHPYLAPYH 295 (328)
T ss_pred cCCcccccc
Confidence 999996443
No 373
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=100.00 E-value=3.8e-33 Score=293.18 Aligned_cols=200 Identities=32% Similarity=0.521 Sum_probs=175.5
Q ss_pred CCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCCh--hhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEEec
Q 003158 512 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 588 (843)
Q Consensus 512 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e~ 588 (843)
+|++.+.||+|++|.||+|... +++.||+|.+..... ...+.+.+|++++++++|+|++++++++.+.+..++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEY 80 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEec
Confidence 4778899999999999999865 688999999886544 3456789999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCCC
Q 003158 589 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 668 (843)
Q Consensus 589 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 668 (843)
+++++|.+++... ..+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.++|+|||.+........
T Consensus 81 ~~~~~L~~~~~~~--~~l~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~- 154 (254)
T cd06627 81 AENGSLRQIIKKF--GPFPESLVAVYVYQVLQGLAYLHEQG---VIHRDIKAANILTTKDGVVKLADFGVATKLNDVSK- 154 (254)
T ss_pred CCCCcHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHhhCC---cccCCCCHHHEEECCCCCEEEeccccceecCCCcc-
Confidence 9999999999664 46899999999999999999999998 99999999999999999999999999987653221
Q ss_pred CcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCc
Q 003158 669 GIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 723 (843)
Q Consensus 669 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~ 723 (843)
......++..|+|||...+..++.++||||+|+++|+|++|+.||....
T Consensus 155 ------~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~ 203 (254)
T cd06627 155 ------DDASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLN 203 (254)
T ss_pred ------cccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCcc
Confidence 1233457889999999988888999999999999999999999997543
No 374
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=100.00 E-value=1.4e-33 Score=309.24 Aligned_cols=281 Identities=24% Similarity=0.334 Sum_probs=201.3
Q ss_pred CCCCCCcccccCCeeEEEEEeC-C--CcEEEEEEeccCC--hhhHHHHHHHHHHHHhc-cCCcccceeeeeec----CCc
Q 003158 512 NFNSSTQIGQGGYGKVYKGILP-D--GTVVAVKRAQEGS--LQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDE----EGE 581 (843)
Q Consensus 512 ~~~~~~~lg~G~~g~Vy~~~~~-~--~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~----~~~ 581 (843)
+|++.+.||+|+||.||++... . +..||+|++.... ....+.+.+|+++++++ +||||+++++++.. ...
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~ 80 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNE 80 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCc
Confidence 4778889999999999999964 4 7899999886432 22346788899999999 59999999987532 245
Q ss_pred EEEEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeecccccc
Q 003158 582 QMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRL 661 (843)
Q Consensus 582 ~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~ 661 (843)
.++++||+. ++|.+++... ..+++..++.++.||+.||+|||+.+ |+||||||+||++++++.+||+|||+++.
T Consensus 81 ~~~~~e~~~-~~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~g---ivH~dlkp~Nili~~~~~~kl~Dfg~a~~ 154 (332)
T cd07857 81 LYLYEELME-ADLHQIIRSG--QPLTDAHFQSFIYQILCGLKYIHSAN---VLHRDLKPGNLLVNADCELKICDFGLARG 154 (332)
T ss_pred EEEEEeccc-CCHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHeEEcCCCCEEeCcCCCcee
Confidence 789999985 6999988543 45889999999999999999999999 99999999999999999999999999986
Q ss_pred CCCCCCCCcccceeeeeecccCCccCchhccc-CCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchh
Q 003158 662 APVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFS 740 (843)
Q Consensus 662 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~ 740 (843)
....... .........|+..|+|||++.+ ..++.++||||+||++|+|++|+.||...... ........
T Consensus 155 ~~~~~~~---~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~-~~~~~~~~------ 224 (332)
T cd07857 155 FSENPGE---NAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYV-DQLNQILQ------ 224 (332)
T ss_pred ccccccc---ccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHH-HHHHHHHH------
Confidence 5432211 1111233568999999998876 56899999999999999999999998754422 11111100
Q ss_pred hccCCCCCCCHHHHHHHHH----HHHHhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCCCCcc
Q 003158 741 VIDGNMGSYPSECVEKFIK----LALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSS 816 (843)
Q Consensus 741 ~~~~~~~~~~~~~~~~l~~----l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~sa~e 816 (843)
..+..+.+....+.. ....-....+ ++.+. ...+..+....+|+.+|++.||++|+|++|
T Consensus 225 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~----------~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ 288 (332)
T cd07857 225 ----VLGTPDEETLSRIGSPKAQNYIRSLPNIP--KKPFE----------SIFPNANPLALDLLEKLLAFDPTKRISVEE 288 (332)
T ss_pred ----HhCCCCHHHHHhhhhhhHHHHHHhccccC--CcchH----------hhCCCCCHHHHHHHHHHccCCcccCCCHHH
Confidence 011112211111100 0000000000 11111 112333455668999999999999999999
Q ss_pred CCCCCccc
Q 003158 817 MLKHPYVS 824 (843)
Q Consensus 817 ~L~Hp~f~ 824 (843)
++.||||.
T Consensus 289 ll~~~~~~ 296 (332)
T cd07857 289 ALEHPYLA 296 (332)
T ss_pred HhcChhhh
Confidence 99999995
No 375
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=100.00 E-value=2.5e-35 Score=286.05 Aligned_cols=247 Identities=26% Similarity=0.395 Sum_probs=199.1
Q ss_pred CCCcccccCCeeEEEEEeC-CCcEEEEEEeccCCh-hhHHHHHHHHHH-HHhccCCcccceeeeeecCCcEEEEEecCCC
Q 003158 515 SSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL-QGEKEFLTEIQF-LSRLHHRNLVSLVGYCDEEGEQMLVYEFMSN 591 (843)
Q Consensus 515 ~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~-l~~l~h~nIv~l~~~~~~~~~~~lV~e~~~~ 591 (843)
....||.|+||+|+|-.++ .|+..|||++..... ...+++..|.+. ++.-++||||+++|.+..++..|+.||.|+
T Consensus 68 dlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCMELMd- 146 (361)
T KOG1006|consen 68 DLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICMELMD- 146 (361)
T ss_pred HHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHHHHh-
Confidence 3567999999999999864 799999999986554 456788999985 455579999999999999999999999994
Q ss_pred CCHHHHHh---hcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCCC
Q 003158 592 GTLRDQLS---AKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 668 (843)
Q Consensus 592 gsL~~~l~---~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 668 (843)
-||+.+.. ......+++...-.|+.....||.||-+.-+ |||||+||+|||++..|.+||+|||++-.+..
T Consensus 147 ~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~lk--iIHRDvKPSNILldr~G~vKLCDFGIcGqLv~---- 220 (361)
T KOG1006|consen 147 ISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEELK--IIHRDVKPSNILLDRHGDVKLCDFGICGQLVD---- 220 (361)
T ss_pred hhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHhh--hhhccCChhheEEecCCCEeeecccchHhHHH----
Confidence 57765543 3344568888888899999999999987653 99999999999999999999999999865432
Q ss_pred CcccceeeeeecccCCccCchhccc--CCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhccCCC
Q 003158 669 GIVPAHVSTVVKGTPGYLDPEYFLT--HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNM 746 (843)
Q Consensus 669 ~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 746 (843)
+...+.-.|...|||||.+.. ..|+-+|||||+|++|||+.||..||....+..+++.. ++.+..
T Consensus 221 ----SiAkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~svfeql~~---------Vv~gdp 287 (361)
T KOG1006|consen 221 ----SIAKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDSVFEQLCQ---------VVIGDP 287 (361)
T ss_pred ----HHHhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHHHHHHHHH---------HHcCCC
Confidence 233355678899999999974 45889999999999999999999999877665555543 233333
Q ss_pred C--CCCHH---HHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 003158 747 G--SYPSE---CVEKFIKLALKCCQDETDARPSMSEVMRE 781 (843)
Q Consensus 747 ~--~~~~~---~~~~l~~l~~~c~~~~p~~RPs~~~vl~~ 781 (843)
+ .++.+ +...+...+..|+.++-..||.+.++...
T Consensus 288 p~l~~~~~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~~ 327 (361)
T KOG1006|consen 288 PILLFDKECVHYSFSMVRFINTCLIKDRSDRPKYDDLKKF 327 (361)
T ss_pred CeecCcccccccCHHHHHHHHHHhhcccccCcchhhhhcC
Confidence 2 23444 67789999999999999999999988653
No 376
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=100.00 E-value=5e-33 Score=299.77 Aligned_cols=200 Identities=29% Similarity=0.454 Sum_probs=166.3
Q ss_pred HcCCCCCCcccccCCeeEEEEEeCC-CcEEEEEEeccCCh-hhHHHHHHHHHHHHhcc-CCcccceeeeeecCCcEEEEE
Q 003158 510 TNNFNSSTQIGQGGYGKVYKGILPD-GTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLH-HRNLVSLVGYCDEEGEQMLVY 586 (843)
Q Consensus 510 ~~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~-h~nIv~l~~~~~~~~~~~lV~ 586 (843)
-++|++.+.||+|+||.||+|..++ ++.||||.++.... ....++..|+.++.+.. |+||+++++++.+....++||
T Consensus 14 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~ 93 (296)
T cd06618 14 LNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFICM 93 (296)
T ss_pred cchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEEe
Confidence 4568889999999999999999764 89999999875432 23456777887776665 999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhc-CCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCC
Q 003158 587 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHT-EADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVP 665 (843)
Q Consensus 587 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~-~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~ 665 (843)
||+. +++.+++.... .++++..+..++.|+++||+|||+ .+ |+||||+|+||++++++.+||+|||++......
T Consensus 94 e~~~-~~l~~l~~~~~-~~l~~~~~~~i~~~i~~~l~~lH~~~~---i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~~ 168 (296)
T cd06618 94 ELMS-TCLDKLLKRIQ-GPIPEDILGKMTVAIVKALHYLKEKHG---VIHRDVKPSNILLDASGNVKLCDFGISGRLVDS 168 (296)
T ss_pred eccC-cCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhhCC---EecCCCcHHHEEEcCCCCEEECccccchhccCC
Confidence 9984 58887775533 368899999999999999999997 46 999999999999999999999999998765321
Q ss_pred CCCCcccceeeeeecccCCccCchhcccCC----CCchhhhHHHHHHHHHHHhCCCCCCCC
Q 003158 666 DIEGIVPAHVSTVVKGTPGYLDPEYFLTHK----LTDKSDVYSLGVVFLELLTGMQPISHG 722 (843)
Q Consensus 666 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~sDvwS~G~~l~elltg~~pf~~~ 722 (843)
. ......++..|+|||.+.+.. ++.++||||||+++|||++|+.||...
T Consensus 169 ~--------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~ 221 (296)
T cd06618 169 K--------AKTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNC 221 (296)
T ss_pred C--------cccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcc
Confidence 1 112234778999999997654 788999999999999999999999653
No 377
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=100.00 E-value=1.6e-33 Score=316.96 Aligned_cols=271 Identities=20% Similarity=0.308 Sum_probs=186.9
Q ss_pred HHcCCCCCCcccccCCeeEEEEEe-----------------CCCcEEEEEEeccCChhhHHH--------------HHHH
Q 003158 509 ATNNFNSSTQIGQGGYGKVYKGIL-----------------PDGTVVAVKRAQEGSLQGEKE--------------FLTE 557 (843)
Q Consensus 509 ~~~~~~~~~~lg~G~~g~Vy~~~~-----------------~~~~~vavK~~~~~~~~~~~~--------------~~~E 557 (843)
..++|++.++||+|+||+||+|.. .+++.||||++........++ ...|
T Consensus 143 ~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE 222 (507)
T PLN03224 143 SSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVE 222 (507)
T ss_pred cccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHH
Confidence 467899999999999999999964 235789999987543322222 3346
Q ss_pred HHHHHhccCCcc-----cceeeeeec--------CCcEEEEEecCCCCCHHHHHhhcCC---------------------
Q 003158 558 IQFLSRLHHRNL-----VSLVGYCDE--------EGEQMLVYEFMSNGTLRDQLSAKSK--------------------- 603 (843)
Q Consensus 558 ~~~l~~l~h~nI-----v~l~~~~~~--------~~~~~lV~e~~~~gsL~~~l~~~~~--------------------- 603 (843)
+.++.+++|.++ ++++++|.. .+..+|||||+++|+|.++++....
T Consensus 223 ~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~ 302 (507)
T PLN03224 223 AYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMP 302 (507)
T ss_pred HHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcc
Confidence 777777766654 677888743 3578999999999999999864211
Q ss_pred -CCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCCCCcccceeeeeeccc
Q 003158 604 -EPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGT 682 (843)
Q Consensus 604 -~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt 682 (843)
..+++..++.++.|+++||.|||+.+ |+||||||+||+++.++.+||+|||++....... ........++
T Consensus 303 ~~~~~~~~~~~i~~ql~~aL~~lH~~~---ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~------~~~~~~g~~t 373 (507)
T PLN03224 303 QDKRDINVIKGVMRQVLTGLRKLHRIG---IVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGI------NFNPLYGMLD 373 (507)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCchHhEEECCCCcEEEEeCcCccccccCC------ccCccccCCC
Confidence 12456778899999999999999998 9999999999999999999999999997543211 0111123357
Q ss_pred CCccCchhcccCCC----------------------CchhhhHHHHHHHHHHHhCCC-CCCCCcchHHHHHHHhhcccch
Q 003158 683 PGYLDPEYFLTHKL----------------------TDKSDVYSLGVVFLELLTGMQ-PISHGKNIVREVNIAYQSSMMF 739 (843)
Q Consensus 683 ~~y~aPE~~~~~~~----------------------~~~sDvwS~G~~l~elltg~~-pf~~~~~~~~~~~~~~~~~~~~ 739 (843)
+.|+|||.+..... ..+.||||+||+++||++|.. ||............
T Consensus 374 p~Y~aPE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~-------- 445 (507)
T PLN03224 374 PRYSPPEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQ-------- 445 (507)
T ss_pred cceeChhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhh--------
Confidence 89999999864321 124799999999999999875 66432211110000
Q ss_pred hhccCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCC---CCCCCCcc
Q 003158 740 SVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKE---ETPPSSSS 816 (843)
Q Consensus 740 ~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp---~~R~sa~e 816 (843)
. ...... |......+..+. .+...+....||+.+||+.+| .+|+||+|
T Consensus 446 ---------~-~~~~~~--------~r~~~~~~~~~~-----------~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~e 496 (507)
T PLN03224 446 ---------Y-DNDLNR--------WRMYKGQKYDFS-----------LLDRNKEAGWDLACKLITKRDQANRGRLSVGQ 496 (507)
T ss_pred ---------c-cchHHH--------HHhhcccCCCcc-----------cccccChHHHHHHHHHhccCCCCcccCCCHHH
Confidence 0 000000 111111111111 122335556789999999766 68999999
Q ss_pred CCCCCcccC
Q 003158 817 MLKHPYVSS 825 (843)
Q Consensus 817 ~L~Hp~f~~ 825 (843)
+|+||||..
T Consensus 497 aL~Hp~f~~ 505 (507)
T PLN03224 497 ALSHRFFLP 505 (507)
T ss_pred HhCCCCcCC
Confidence 999999964
No 378
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=4.8e-34 Score=308.85 Aligned_cols=257 Identities=25% Similarity=0.368 Sum_probs=207.9
Q ss_pred HcCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCChhh--HHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEE
Q 003158 510 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQG--EKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 586 (843)
Q Consensus 510 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~ 586 (843)
...|.+...||+|.|++|..|+.. ++..||+|.+++..... .+.+.+|+++|..+.|||||+++.+......+|+||
T Consensus 55 vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~lylV~ 134 (596)
T KOG0586|consen 55 VGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLYLVM 134 (596)
T ss_pred ccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeEEEE
Confidence 457888999999999999999964 69999999998754332 345899999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCC
Q 003158 587 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 666 (843)
Q Consensus 587 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~ 666 (843)
||+.+|.+.+++...+. ..+..+..++.|+.+|++|||+++ |||||||++|||++.+.++||+|||++..+..
T Consensus 135 eya~~ge~~~yl~~~gr--~~e~~ar~~F~q~vsaveYcH~k~---ivHrdLk~eNilL~~~mnikIaDfgfS~~~~~-- 207 (596)
T KOG0586|consen 135 EYASGGELFDYLVKHGR--MKEKEARAKFRQIVSAVEYCHSKN---IVHRDLKAENILLDENMNIKIADFGFSTFFDY-- 207 (596)
T ss_pred EeccCchhHHHHHhccc--chhhhhhhhhHHHHHHHHHHhhcc---eeccccchhhcccccccceeeeccccceeecc--
Confidence 99999999999987665 455788889999999999999999 99999999999999999999999999988763
Q ss_pred CCCcccceeeeeecccCCccCchhcccCCC-CchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhccCC
Q 003158 667 IEGIVPAHVSTVVKGTPGYLDPEYFLTHKL-TDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGN 745 (843)
Q Consensus 667 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 745 (843)
.......+|++.|.|||++.+.+| ++.+|+||+|+++|.|+.|..||+...-.. ++ ..++.+.
T Consensus 208 ------~~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~--Lr--------~rvl~gk 271 (596)
T KOG0586|consen 208 ------GLMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKE--LR--------PRVLRGK 271 (596)
T ss_pred ------cccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCccccc--cc--------chheeee
Confidence 234456789999999999999776 568999999999999999999997543100 00 0001000
Q ss_pred CCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCCCCccCCCCCcccC
Q 003158 746 MGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSS 825 (843)
Q Consensus 746 ~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~sa~e~L~Hp~f~~ 825 (843)
.. .| --...+..++|+++|..+|.+|++.++++.|.|...
T Consensus 272 ~r-Ip---------------------------------------~~ms~dce~lLrk~lvl~Pskr~~~dqim~~~W~n~ 311 (596)
T KOG0586|consen 272 YR-IP---------------------------------------FYMSCDCEDLLRKFLVLNPSKRGPCDQIMKDRWRND 311 (596)
T ss_pred ec-cc---------------------------------------ceeechhHHHHHHhhccCccccCCHHHhhhhcccch
Confidence 00 00 011233346888888899999999999999999865
Q ss_pred CCCC
Q 003158 826 DVSG 829 (843)
Q Consensus 826 ~~~~ 829 (843)
.-..
T Consensus 312 ~~~~ 315 (596)
T KOG0586|consen 312 LLEA 315 (596)
T ss_pred hhhh
Confidence 5444
No 379
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=100.00 E-value=3.4e-33 Score=330.99 Aligned_cols=146 Identities=25% Similarity=0.381 Sum_probs=130.9
Q ss_pred cCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCCh---hhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEE
Q 003158 511 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 586 (843)
Q Consensus 511 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~ 586 (843)
++|.+.++||+|+||+||+|... +++.||||++..... .....+.+|+.+++.++|+||+++++++......++||
T Consensus 4 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lVm 83 (669)
T cd05610 4 EEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLVM 83 (669)
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEEE
Confidence 57889999999999999999975 689999999875332 22367889999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeecccccc
Q 003158 587 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRL 661 (843)
Q Consensus 587 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~ 661 (843)
||+.+++|.+++.... .+++..++.++.||+.||+|||+.+ ||||||||+|||++.++.+||+|||+++.
T Consensus 84 Ey~~g~~L~~li~~~~--~l~~~~~~~i~~qil~aL~yLH~~g---IiHrDLKP~NILl~~~g~vkL~DFGls~~ 153 (669)
T cd05610 84 EYLIGGDVKSLLHIYG--YFDEEMAVKYISEVALALDYLHRHG---IIHRDLKPDNMLISNEGHIKLTDFGLSKV 153 (669)
T ss_pred eCCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCC---EEeCCccHHHEEEcCCCCEEEEeCCCCcc
Confidence 9999999999996543 4788889999999999999999998 99999999999999999999999999863
No 380
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.2e-34 Score=310.94 Aligned_cols=245 Identities=22% Similarity=0.294 Sum_probs=197.2
Q ss_pred HcCCCCCCcccccCCeeEEEEEe-CCCcEEEEEEeccCChhhHHHHHHHHHHHHhc-cCCcccceeeeeecCCcEEEEEe
Q 003158 510 TNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQMLVYE 587 (843)
Q Consensus 510 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~lV~e 587 (843)
++.|.....+|.|+|+.|-.+.. .+++..+||++... ..+..+|+.++... +||||+++.+.+.+..+.|+|||
T Consensus 321 ~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~----~~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~e 396 (612)
T KOG0603|consen 321 TESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKR----ADDNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVME 396 (612)
T ss_pred chhhccccccCCCCccceeeeeccccccchhheecccc----ccccccccchhhhhcCCCcceeecceecCCceeeeeeh
Confidence 45677778899999999999985 46899999999864 22344577666555 79999999999999999999999
Q ss_pred cCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEE-cCCCcEEEeeccccccCCCCC
Q 003158 588 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILL-DHKFTAKVADFGLSRLAPVPD 666 (843)
Q Consensus 588 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl-~~~~~~kl~DfGla~~~~~~~ 666 (843)
.+.++-+.+.+..... + ...+..|+.+|+.|+.|||++| ||||||||+|||+ ++.++++|+|||.++.....
T Consensus 397 ~l~g~ell~ri~~~~~--~-~~e~~~w~~~lv~Av~~LH~~g---vvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~- 469 (612)
T KOG0603|consen 397 LLDGGELLRRIRSKPE--F-CSEASQWAAELVSAVDYLHEQG---VVHRDLKPGNILLDGSAGHLRLTYFGFWSELERS- 469 (612)
T ss_pred hccccHHHHHHHhcch--h-HHHHHHHHHHHHHHHHHHHhcC---eeecCCChhheeecCCCCcEEEEEechhhhCchh-
Confidence 9999988887755432 2 2667789999999999999999 9999999999999 69999999999999876432
Q ss_pred CCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhccCCC
Q 003158 667 IEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNM 746 (843)
Q Consensus 667 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 746 (843)
....+-|..|.|||+....+|++++|+||||++||+|++|+.||....+..
T Consensus 470 ---------~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~~-------------------- 520 (612)
T KOG0603|consen 470 ---------CDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAGI-------------------- 520 (612)
T ss_pred ---------hcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCchH--------------------
Confidence 223346788999999999999999999999999999999999997543210
Q ss_pred CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCCCCccCCCCCcccC
Q 003158 747 GSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSS 825 (843)
Q Consensus 747 ~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~sa~e~L~Hp~f~~ 825 (843)
-+..|+ .+|.++ ...+..++||+++||++||++|+++.|++.||||.+
T Consensus 521 -------------ei~~~i-----~~~~~s-------------~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~h~w~~~ 568 (612)
T KOG0603|consen 521 -------------EIHTRI-----QMPKFS-------------ECVSDEAKDLLQQLLQVDPALRLGADEIGAHPWFLS 568 (612)
T ss_pred -------------HHHHhh-----cCCccc-------------cccCHHHHHHHHHhccCChhhCcChhhhccCcchhc
Confidence 111111 123222 223556679999999999999999999999999933
No 381
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=100.00 E-value=3.4e-33 Score=292.98 Aligned_cols=193 Identities=31% Similarity=0.428 Sum_probs=168.2
Q ss_pred ccccCCeeEEEEEeC-CCcEEEEEEeccCChh---hHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEEecCCCCCH
Q 003158 519 IGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ---GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTL 594 (843)
Q Consensus 519 lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e~~~~gsL 594 (843)
||+|+||.||++... +++.||+|.+...... ....+..|+++++.++|+||+++++.+..++..++||||+++++|
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L 80 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL 80 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence 699999999999965 5899999998754332 345788999999999999999999999999999999999999999
Q ss_pred HHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCCCCcccce
Q 003158 595 RDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAH 674 (843)
Q Consensus 595 ~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~ 674 (843)
.+++.... .+++..+..++.|+++||.|||+.+ ++|+||+|+||+++.++.++|+|||++....... .
T Consensus 81 ~~~l~~~~--~l~~~~~~~~~~qi~~~l~~lh~~~---~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~-------~ 148 (250)
T cd05123 81 FSHLSKEG--RFSEERARFYAAEIVLALEYLHSLG---IIYRDLKPENILLDADGHIKLTDFGLAKELSSEG-------S 148 (250)
T ss_pred HHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCcceEEEcCCCcEEEeecCcceecccCC-------C
Confidence 99996643 5889999999999999999999988 9999999999999999999999999997654321 1
Q ss_pred eeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCc
Q 003158 675 VSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 723 (843)
Q Consensus 675 ~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~ 723 (843)
......++..|+|||...+..++.++|+||||+++||+++|..||....
T Consensus 149 ~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~ 197 (250)
T cd05123 149 RTNTFCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAED 197 (250)
T ss_pred cccCCcCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCC
Confidence 1234457889999999998889999999999999999999999996543
No 382
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=100.00 E-value=7.5e-33 Score=292.40 Aligned_cols=200 Identities=26% Similarity=0.363 Sum_probs=166.0
Q ss_pred CCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCC-----hhhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEE
Q 003158 512 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS-----LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLV 585 (843)
Q Consensus 512 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV 585 (843)
+|.+.+.||+|+||.||++... .+..+++|.++... .....++..|+.+++.++||||+++++++.+.+..++|
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCII 80 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEE
Confidence 5788899999999999999864 34556666654321 12234577899999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhh--cCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCC
Q 003158 586 YEFMSNGTLRDQLSA--KSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAP 663 (843)
Q Consensus 586 ~e~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~ 663 (843)
|||+++++|.+++.. .....+++..++.++.|+++||.|||+.+ ++|+||||+||++++ +.++|+|||.+....
T Consensus 81 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~---i~h~~l~~~nili~~-~~~~l~d~g~~~~~~ 156 (260)
T cd08222 81 TEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRR---ILHRDLKAKNIFLKN-NLLKIGDFGVSRLLM 156 (260)
T ss_pred EEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcC---ccccCCChhheEeec-CCEeecccCceeecC
Confidence 999999999999865 23456899999999999999999999998 999999999999975 569999999987653
Q ss_pred CCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCC
Q 003158 664 VPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 722 (843)
Q Consensus 664 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~ 722 (843)
... .......|+..|+|||...+..++.++|+||||+++|+|++|..||...
T Consensus 157 ~~~-------~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~ 208 (260)
T cd08222 157 GSC-------DLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQ 208 (260)
T ss_pred CCc-------ccccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCc
Confidence 221 1122345788999999998888899999999999999999999998643
No 383
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=100.00 E-value=2e-34 Score=287.67 Aligned_cols=282 Identities=23% Similarity=0.319 Sum_probs=215.6
Q ss_pred HcCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccC--ChhhHHHHHHHHHHHHhccCCcccceeeeeecC------C
Q 003158 510 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEG--SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE------G 580 (843)
Q Consensus 510 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~------~ 580 (843)
..+|.....+|.|.- .|..|.+. .++.||+|..... .....++..+|..++..+.|+||++++.+|.-. .
T Consensus 16 ~~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~ 94 (369)
T KOG0665|consen 16 PKRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQ 94 (369)
T ss_pred eeeeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHH
Confidence 356777788999988 56556543 5899999987643 234457889999999999999999999998543 4
Q ss_pred cEEEEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccc
Q 003158 581 EQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSR 660 (843)
Q Consensus 581 ~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~ 660 (843)
..|+|||+| .++|...+.- .++-.....|..|++.|++|||+.+ |+||||||+||++..++.+||.|||+|+
T Consensus 95 e~y~v~e~m-~~nl~~vi~~----elDH~tis~i~yq~~~~ik~lhs~~---IihRdLkPsnivv~~~~~lKi~dfg~ar 166 (369)
T KOG0665|consen 95 EVYLVMELM-DANLCQVILM----ELDHETISYILYQMLCGIKHLHSAG---IIHRDLKPSNIVVNSDCTLKILDFGLAR 166 (369)
T ss_pred hHHHHHHhh-hhHHHHHHHH----hcchHHHHHHHHHHHHHHHHHHhcc---eeecccCcccceecchhheeeccchhhc
Confidence 679999999 5799998863 3667788899999999999999999 9999999999999999999999999998
Q ss_pred cCCCCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchh
Q 003158 661 LAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFS 740 (843)
Q Consensus 661 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~ 740 (843)
.... ....+....|..|+|||++.+..+.+.+||||+||++.||++|+..|.+.....+ +...
T Consensus 167 ~e~~--------~~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ-~~ki-------- 229 (369)
T KOG0665|consen 167 TEDT--------DFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGKDHIDQ-WNKI-------- 229 (369)
T ss_pred ccCc--------ccccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCchHHHH-HHHH--------
Confidence 6542 2345667788999999999998899999999999999999999999875444333 3322
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhh-hC-------CCCCCCCCccccCCCCCCCCCCC
Q 003158 741 VIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWN-MM-------PESDTKTPEFINSEHTSKEETPP 812 (843)
Q Consensus 741 ~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~-~~-------~~~~~~~~dll~~~L~~dp~~R~ 812 (843)
...++...+.+..++...+..... .||.... ...-+.+.+ .+ +.....+.|++.+||..||++|+
T Consensus 230 --~~~lgtpd~~F~~qL~~~~r~yv~----~~~~y~~-~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Ri 302 (369)
T KOG0665|consen 230 --IEQLGTPDPSFMKQLQPTVRNYVE----NRPQYQA-ISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRI 302 (369)
T ss_pred --HHHhcCCCHHHHHHhhHHHHHHhh----cChHhhc-cchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcc
Confidence 223455667777777766665544 3332222 111111111 01 11223356799999999999999
Q ss_pred CCccCCCCCccc
Q 003158 813 SSSSMLKHPYVS 824 (843)
Q Consensus 813 sa~e~L~Hp~f~ 824 (843)
+++++|+|||+.
T Consensus 303 sv~daL~HPY~~ 314 (369)
T KOG0665|consen 303 SVDDALRHPYIK 314 (369)
T ss_pred cHHHHhcCCeee
Confidence 999999999997
No 384
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=100.00 E-value=3.8e-33 Score=290.35 Aligned_cols=179 Identities=23% Similarity=0.214 Sum_probs=152.9
Q ss_pred cCCeeEEEEEeC-CCcEEEEEEeccCChhhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEEecCCCCCHHHHHhh
Q 003158 522 GGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSA 600 (843)
Q Consensus 522 G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~ 600 (843)
|.+|+||++... +++.||+|++.... .+.+|...+....||||+++++++.+.+..++||||+++|+|.+++..
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~-----~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~ 78 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS-----EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISK 78 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh-----hhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHHHH
Confidence 899999999964 68999999987532 233455555566799999999999999999999999999999999865
Q ss_pred cCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCCCCcccceeeeeec
Q 003158 601 KSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVK 680 (843)
Q Consensus 601 ~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~ 680 (843)
.. .+++..+..++.|+++||+|||+.+ |+||||||+||+++.++.++++|||.+...... .....
T Consensus 79 ~~--~l~~~~~~~~~~ql~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~----------~~~~~ 143 (237)
T cd05576 79 FL--NIPEECVKRWAAEMVVALDALHREG---IVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDS----------CDGEA 143 (237)
T ss_pred hc--CCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHEEEcCCCCEEEecccchhccccc----------cccCC
Confidence 43 4889999999999999999999998 999999999999999999999999987654321 11233
Q ss_pred ccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCC
Q 003158 681 GTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPIS 720 (843)
Q Consensus 681 gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~ 720 (843)
++..|+|||.+.+..++.++||||+||++|||++|+.|+.
T Consensus 144 ~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~ 183 (237)
T cd05576 144 VENMYCAPEVGGISEETEACDWWSLGAILFELLTGKTLVE 183 (237)
T ss_pred cCccccCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhh
Confidence 5678999999988889999999999999999999988764
No 385
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=100.00 E-value=1.8e-33 Score=324.94 Aligned_cols=277 Identities=23% Similarity=0.316 Sum_probs=178.2
Q ss_pred HHcCCCCCCcccccCCeeEEEEEeC-C----CcEEEEEEeccCChhhHHHHHHHHHHHHhccCCcccceeee------ee
Q 003158 509 ATNNFNSSTQIGQGGYGKVYKGILP-D----GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGY------CD 577 (843)
Q Consensus 509 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~----~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~------~~ 577 (843)
..++|+..+.||+|+||.||+|.+. + +..||+|++...... +....| .++...+.++..++.. +.
T Consensus 130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~~--e~~~~e--~l~~~~~~~~~~~~~~~~~~~~~~ 205 (566)
T PLN03225 130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGAV--EIWMNE--RVRRACPNSCADFVYGFLEPVSSK 205 (566)
T ss_pred ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccchh--HHHHHH--HHHhhchhhHHHHHHhhhcccccc
Confidence 5678999999999999999999965 4 689999987642211 111111 1122223333332222 24
Q ss_pred cCCcEEEEEecCCCCCHHHHHhhcCCC------------------CcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCC
Q 003158 578 EEGEQMLVYEFMSNGTLRDQLSAKSKE------------------PLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIK 639 (843)
Q Consensus 578 ~~~~~~lV~e~~~~gsL~~~l~~~~~~------------------~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlk 639 (843)
.+...++||||+++++|.+++...... ......+..++.|++.||+|||+++ |+|||||
T Consensus 206 ~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~g---IiHRDLK 282 (566)
T PLN03225 206 KEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTG---IVHRDVK 282 (566)
T ss_pred cCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCC---EEeCcCC
Confidence 566899999999999999998653211 0123345679999999999999998 9999999
Q ss_pred CCcEEEcC-CCcEEEeeccccccCCCCCCCCcccceeeeeecccCCccCchhcccC----------------------CC
Q 003158 640 ASNILLDH-KFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTH----------------------KL 696 (843)
Q Consensus 640 p~NILl~~-~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----------------------~~ 696 (843)
|+|||+++ ++.+||+|||+|+...... ........+++.|+|||.+... .+
T Consensus 283 P~NILl~~~~~~~KL~DFGlA~~l~~~~------~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~ 356 (566)
T PLN03225 283 PQNIIFSEGSGSFKIIDLGAAADLRVGI------NYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNL 356 (566)
T ss_pred HHHEEEeCCCCcEEEEeCCCcccccccc------ccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccC
Confidence 99999986 5799999999998653221 1122345688999999976432 23
Q ss_pred CchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhccCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHH
Q 003158 697 TDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMS 776 (843)
Q Consensus 697 ~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~ 776 (843)
+.++|||||||++|||+++..++.. .. ......+... ..+. ..+.... .+..++...
T Consensus 357 ~~k~DVwSlGviL~el~~~~~~~~~--~~-~~~~~~l~~~-----------~~~~---~~~~~~~------~~~~~~~~~ 413 (566)
T PLN03225 357 PDRFDIYSAGLIFLQMAFPNLRSDS--NL-IQFNRQLKRN-----------DYDL---VAWRKLV------EPRASPDLR 413 (566)
T ss_pred CCCcccHHHHHHHHHHHhCcCCCch--HH-HHHHHHHHhc-----------CCcH---HHHHHhh------ccccchhhh
Confidence 4467999999999999987655431 11 1111110000 0000 0111100 111112111
Q ss_pred HHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCCCCccCCCCCcccCCCC
Q 003158 777 EVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSSDVS 828 (843)
Q Consensus 777 ~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~sa~e~L~Hp~f~~~~~ 828 (843)
+. .+.+........||+.+||+.||++|+|++|+|+||||++...
T Consensus 414 ~~-------~~~~d~~~~~~~dLi~~mL~~dP~kR~ta~e~L~Hpff~~~~~ 458 (566)
T PLN03225 414 RG-------FEVLDLDGGAGWELLKSMMRFKGRQRISAKAALAHPYFDREGL 458 (566)
T ss_pred hh-------hhhccccchHHHHHHHHHccCCcccCCCHHHHhCCcCcCCCCc
Confidence 11 1111122233458999999999999999999999999987554
No 386
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=100.00 E-value=2.4e-32 Score=296.07 Aligned_cols=196 Identities=32% Similarity=0.514 Sum_probs=166.2
Q ss_pred cCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccC---ChhhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEE
Q 003158 511 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEG---SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 586 (843)
Q Consensus 511 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~ 586 (843)
+.|+..+.||+|+||.||+|+.. +++.||+|.+... .....+++.+|+++++.++|+|++++++++......++||
T Consensus 15 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 94 (308)
T cd06634 15 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM 94 (308)
T ss_pred HHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEE
Confidence 34666788999999999999964 6889999988642 2233457888999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCC
Q 003158 587 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 666 (843)
Q Consensus 587 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~ 666 (843)
||+. |++.+++... ..++++..+..++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||++......
T Consensus 95 e~~~-~~l~~~~~~~-~~~l~~~~~~~~~~~l~~~l~~LH~~~---i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~- 168 (308)
T cd06634 95 EYCL-GSASDLLEVH-KKPLQEVEIAAVTHGALQGLAYLHSHN---MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA- 168 (308)
T ss_pred EccC-CCHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHhEEECCCCcEEECCcccceeecCc-
Confidence 9996 6888877543 345889999999999999999999998 999999999999999999999999998754321
Q ss_pred CCCcccceeeeeecccCCccCchhcc---cCCCCchhhhHHHHHHHHHHHhCCCCCCCC
Q 003158 667 IEGIVPAHVSTVVKGTPGYLDPEYFL---THKLTDKSDVYSLGVVFLELLTGMQPISHG 722 (843)
Q Consensus 667 ~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDvwS~G~~l~elltg~~pf~~~ 722 (843)
....++..|+|||.+. ...++.++|||||||++|||++|+.||...
T Consensus 169 ----------~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~ 217 (308)
T cd06634 169 ----------NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNM 217 (308)
T ss_pred ----------ccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccc
Confidence 2235788999999985 356788999999999999999999998654
No 387
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=100.00 E-value=5.2e-32 Score=294.16 Aligned_cols=195 Identities=33% Similarity=0.522 Sum_probs=165.9
Q ss_pred CCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCCh---hhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEEec
Q 003158 513 FNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 588 (843)
Q Consensus 513 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e~ 588 (843)
|...+.||+|+||+||+|+.. +++.||+|.+..... ...+.+.+|+++++.++|+|++++++++.+....++||||
T Consensus 23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 102 (313)
T cd06633 23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEY 102 (313)
T ss_pred hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEec
Confidence 556678999999999999964 689999999864322 2335688899999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCCC
Q 003158 589 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 668 (843)
Q Consensus 589 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 668 (843)
+. |++.+++... ..++++..++.++.|++.||.|||+.+ ++||||||+||++++++.+||+|||++.....
T Consensus 103 ~~-~~l~~~l~~~-~~~l~~~~~~~~~~qi~~al~~LH~~g---i~H~dl~p~nili~~~~~~kL~dfg~~~~~~~---- 173 (313)
T cd06633 103 CL-GSASDLLEVH-KKPLQEVEIAAITHGALQGLAYLHSHN---MIHRDIKAGNILLTEPGQVKLADFGSASKSSP---- 173 (313)
T ss_pred CC-CCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCChhhEEECCCCCEEEeecCCCcccCC----
Confidence 95 6888887553 346889999999999999999999999 99999999999999999999999999864321
Q ss_pred CcccceeeeeecccCCccCchhcc---cCCCCchhhhHHHHHHHHHHHhCCCCCCCCc
Q 003158 669 GIVPAHVSTVVKGTPGYLDPEYFL---THKLTDKSDVYSLGVVFLELLTGMQPISHGK 723 (843)
Q Consensus 669 ~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDvwS~G~~l~elltg~~pf~~~~ 723 (843)
.....|+..|+|||++. ...++.++|||||||++|||++|..||....
T Consensus 174 -------~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~ 224 (313)
T cd06633 174 -------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMN 224 (313)
T ss_pred -------CCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 12345788999999984 3568889999999999999999999987544
No 388
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=3.4e-33 Score=320.60 Aligned_cols=257 Identities=25% Similarity=0.336 Sum_probs=188.3
Q ss_pred HHHcCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCC-hhhHHHHHHHHHHHHhccCCcccceeeeeec-------
Q 003158 508 LATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDE------- 578 (843)
Q Consensus 508 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~------- 578 (843)
.-.++|+..+.||+||||.|||++-+ ||+.||||++.... ...-..+.+|+.++++++|||||+++..+.+
T Consensus 476 RY~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~~ 555 (1351)
T KOG1035|consen 476 RYLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELTV 555 (1351)
T ss_pred hHhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCcccc
Confidence 34567888999999999999999965 89999999987543 2234678899999999999999998632100
Q ss_pred --------------------------------------------------------------------------------
Q 003158 579 -------------------------------------------------------------------------------- 578 (843)
Q Consensus 579 -------------------------------------------------------------------------------- 578 (843)
T Consensus 556 ~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS~ 635 (1351)
T KOG1035|consen 556 LEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTSD 635 (1351)
T ss_pred ccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCcccccccccccccccccc
Confidence
Q ss_pred ------------------------C--------CcEEEEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHh
Q 003158 579 ------------------------E--------GEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLH 626 (843)
Q Consensus 579 ------------------------~--------~~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH 626 (843)
+ ..+||=||||+.-+++++++++.... .....++++++|++||.|+|
T Consensus 636 ~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~-~~d~~wrLFreIlEGLaYIH 714 (1351)
T KOG1035|consen 636 SEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNS-QRDEAWRLFREILEGLAYIH 714 (1351)
T ss_pred cCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccch-hhHHHHHHHHHHHHHHHHHH
Confidence 0 12478899999888888886643321 46778899999999999999
Q ss_pred cCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCC----CC-----CC--CCcccceeeeeecccCCccCchhcccC-
Q 003158 627 TEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAP----VP-----DI--EGIVPAHVSTVVKGTPGYLDPEYFLTH- 694 (843)
Q Consensus 627 ~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~----~~-----~~--~~~~~~~~~~~~~gt~~y~aPE~~~~~- 694 (843)
++| ||||||||.||++|+++.|||+|||+|.... .. .. .........+..+||.-|+|||++.+.
T Consensus 715 ~~g---iIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~ 791 (1351)
T KOG1035|consen 715 DQG---IIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTS 791 (1351)
T ss_pred hCc---eeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhcccc
Confidence 999 9999999999999999999999999998722 00 00 011122245677899999999999864
Q ss_pred --CCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhccCCCCCC---CHHHHHHHHHHHHHhcccCC
Q 003158 695 --KLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSY---PSECVEKFIKLALKCCQDET 769 (843)
Q Consensus 695 --~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~l~~~c~~~~p 769 (843)
.|+.|+|+||+|++++||+ +||........ .+..+.++..+.. .....+.-.+++..+++.||
T Consensus 792 ~~~Yn~KiDmYSLGIVlFEM~---yPF~TsMERa~---------iL~~LR~g~iP~~~~f~~~~~~~e~slI~~Ll~hdP 859 (1351)
T KOG1035|consen 792 SNKYNSKIDMYSLGIVLFEML---YPFGTSMERAS---------ILTNLRKGSIPEPADFFDPEHPEEASLIRWLLSHDP 859 (1351)
T ss_pred cccccchhhhHHHHHHHHHHh---ccCCchHHHHH---------HHHhcccCCCCCCcccccccchHHHHHHHHHhcCCC
Confidence 4999999999999999999 57764432211 1122333333322 33333444566677777777
Q ss_pred CCCCCHHHHHH
Q 003158 770 DARPSMSEVMR 780 (843)
Q Consensus 770 ~~RPs~~~vl~ 780 (843)
.+||++.+++.
T Consensus 860 ~kRPtA~eLL~ 870 (1351)
T KOG1035|consen 860 SKRPTATELLN 870 (1351)
T ss_pred ccCCCHHHHhh
Confidence 77777776653
No 389
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=100.00 E-value=5.1e-33 Score=304.56 Aligned_cols=201 Identities=30% Similarity=0.462 Sum_probs=172.3
Q ss_pred CCCCCcccccCCeeEEEEE-eCCCcEEEEEEeccCC-hhhHHHHHHHHHHHHhccCCcccceeeeeec------CCcEEE
Q 003158 513 FNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDE------EGEQML 584 (843)
Q Consensus 513 ~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~------~~~~~l 584 (843)
+...+.||+|+||.||+|+ ...|+.||||.+.... ....+...+|+++|++++|+|||++++.-.+ .....+
T Consensus 15 W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~vl 94 (732)
T KOG4250|consen 15 WEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPVL 94 (732)
T ss_pred eeehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccceE
Confidence 3446789999999999999 5579999999998643 3445678899999999999999999998644 346789
Q ss_pred EEecCCCCCHHHHHhhc-CCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEc--CCC--cEEEeecccc
Q 003158 585 VYEFMSNGTLRDQLSAK-SKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLD--HKF--TAKVADFGLS 659 (843)
Q Consensus 585 V~e~~~~gsL~~~l~~~-~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~--~~~--~~kl~DfGla 659 (843)
|||||.+|||+..+.+. ....+++.+.+.+..+++.||.|||+++ ||||||||.||++- ++| .-||+|||.|
T Consensus 95 vmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~---IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~A 171 (732)
T KOG4250|consen 95 VMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENG---IVHRDLKPGNIVLQIGEDGQSIYKLTDFGAA 171 (732)
T ss_pred EEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcC---ceeccCCCCcEEEeecCCCceEEeeeccccc
Confidence 99999999999999763 3456999999999999999999999999 99999999999984 333 5899999999
Q ss_pred ccCCCCCCCCcccceeeeeecccCCccCchhccc-CCCCchhhhHHHHHHHHHHHhCCCCCCCCcc
Q 003158 660 RLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKN 724 (843)
Q Consensus 660 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwS~G~~l~elltg~~pf~~~~~ 724 (843)
+.++.. ...+..+||..|.+||.... ..|+..+|.|||||++||+.||..||.+...
T Consensus 172 rel~d~--------s~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~ 229 (732)
T KOG4250|consen 172 RELDDN--------SLFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFGG 229 (732)
T ss_pred ccCCCC--------CeeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCCC
Confidence 977632 34577889999999999995 8889999999999999999999999976443
No 390
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-32 Score=307.27 Aligned_cols=257 Identities=27% Similarity=0.438 Sum_probs=213.5
Q ss_pred HHHHHHHHcCCCCCCcccccCCeeEEEEE-eCCCcEEEEEEeccCChhhHHHHHHHHHHHHhc-cCCcccceeeeee---
Q 003158 503 YGEMALATNNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRL-HHRNLVSLVGYCD--- 577 (843)
Q Consensus 503 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~--- 577 (843)
++.+...++-|++.+.||+|.+|.||+++ .++++.+|+|+..... ..+++++.|.++++.. +|||++.++|++.
T Consensus 11 ~~~lpdp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~-d~deEiE~eynil~~~~~hpnv~~fyg~~~k~~ 89 (953)
T KOG0587|consen 11 LSSLPDPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTE-DEEEEIELEYNMLKKYSHHPNVATFYGAFIKKD 89 (953)
T ss_pred hhhCCCCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCc-cccHHHHHHHHHHHhccCCCCcceEEEEEEEec
Confidence 34444557788999999999999999999 5689999999988643 3345778899999887 6999999999983
Q ss_pred --cCCcEEEEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEee
Q 003158 578 --EEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVAD 655 (843)
Q Consensus 578 --~~~~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~D 655 (843)
.++++|||||||.+||..|+++.-....+.|..+..|+..++.|+.+||... ++|||||-.|||++.++.||+.|
T Consensus 90 ~~~~DqLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~nk---viHRDikG~NiLLT~e~~VKLvD 166 (953)
T KOG0587|consen 90 PGNGDQLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNNK---VIHRDIKGQNVLLTENAEVKLVD 166 (953)
T ss_pred CCCCCeEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhcc---eeeecccCceEEEeccCcEEEee
Confidence 3578999999999999999998766778999999999999999999999998 99999999999999999999999
Q ss_pred ccccccCCCCCCCCcccceeeeeecccCCccCchhcccC-----CCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHH
Q 003158 656 FGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTH-----KLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVN 730 (843)
Q Consensus 656 fGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~ 730 (843)
||.+..+... ........||+.|||||++... .|+.++|+||+|++..||--|.+|+.+.....
T Consensus 167 FGvSaQldsT-------~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmr---- 235 (953)
T KOG0587|consen 167 FGVSAQLDST-------VGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMR---- 235 (953)
T ss_pred eeeeeeeecc-------cccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchhh----
Confidence 9999876532 2334567899999999999753 46778999999999999999999998654321
Q ss_pred HHhhcccchhhccCCCCC--CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 003158 731 IAYQSSMMFSVIDGNMGS--YPSECVEKFIKLALKCCQDETDARPSMSEVMR 780 (843)
Q Consensus 731 ~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~ 780 (843)
.++.+.....+. .|..+..++.+.+..|+.++.++||++.++++
T Consensus 236 ------aLF~IpRNPPPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~ 281 (953)
T KOG0587|consen 236 ------ALFLIPRNPPPKLKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLK 281 (953)
T ss_pred ------hhccCCCCCCccccchhhHHHHHHHHHHHHHhhccccCcchhhhcc
Confidence 122222222222 37889999999999999999999999988764
No 391
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-33 Score=295.32 Aligned_cols=203 Identities=22% Similarity=0.345 Sum_probs=179.7
Q ss_pred HcCCCCCCcccccCCeeEEEEEeCCC-cEEEEEEeccCCh---hhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEE
Q 003158 510 TNNFNSSTQIGQGGYGKVYKGILPDG-TVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLV 585 (843)
Q Consensus 510 ~~~~~~~~~lg~G~~g~Vy~~~~~~~-~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV 585 (843)
-.+++.+..||-|+||.|-....+.. ..+|+|++++... ..++.+..|-++|...+.|.||++|-.|.++...|+.
T Consensus 419 l~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYmL 498 (732)
T KOG0614|consen 419 LSDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYML 498 (732)
T ss_pred hhhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhhh
Confidence 34566677899999999999887543 3589998876433 3345678899999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCC
Q 003158 586 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVP 665 (843)
Q Consensus 586 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~ 665 (843)
||-|-||.|+..+++++ .++....+.++..+.+|++|||+++ ||.|||||+|+++|.+|-+||.|||.|+....
T Consensus 499 mEaClGGElWTiLrdRg--~Fdd~tarF~~acv~EAfeYLH~k~---iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~- 572 (732)
T KOG0614|consen 499 MEACLGGELWTILRDRG--SFDDYTARFYVACVLEAFEYLHRKG---IIYRDLKPENLLLDNRGYLKLVDFGFAKKIGS- 572 (732)
T ss_pred HHhhcCchhhhhhhhcC--CcccchhhhhHHHHHHHHHHHHhcC---ceeccCChhheeeccCCceEEeehhhHHHhcc-
Confidence 99999999999997754 4888999999999999999999999 99999999999999999999999999998764
Q ss_pred CCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCcch
Q 003158 666 DIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNI 725 (843)
Q Consensus 666 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~ 725 (843)
...+...+||+.|.|||++....++.++|.||+|+++|||++|.+||...+..
T Consensus 573 -------g~KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpm 625 (732)
T KOG0614|consen 573 -------GRKTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPM 625 (732)
T ss_pred -------CCceeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchH
Confidence 34567789999999999999999999999999999999999999999876643
No 392
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4e-33 Score=277.89 Aligned_cols=203 Identities=24% Similarity=0.387 Sum_probs=177.8
Q ss_pred HHHHHcCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCCh---hhHHHHHHHHHHHHhc-cCCcccceeeeeecCC
Q 003158 506 MALATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEG 580 (843)
Q Consensus 506 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~ 580 (843)
+.+..++|..+++||+|+|.+|-.+++. +.+.+|+|++++.-. +.....+.|-.+.... +||.+|.++.+|..+.
T Consensus 245 ~~l~l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtes 324 (593)
T KOG0695|consen 245 QGLGLQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTES 324 (593)
T ss_pred cccccccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccc
Confidence 3445678999999999999999999964 688999999886432 2334567787777776 6999999999999999
Q ss_pred cEEEEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccc
Q 003158 581 EQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSR 660 (843)
Q Consensus 581 ~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~ 660 (843)
.+++|.||++||+|--+++++. .++++.++.+...|.-||.|||++| ||.||||.+|||+|..|.+|+.|+|+++
T Consensus 325 rlffvieyv~ggdlmfhmqrqr--klpeeharfys~ei~lal~flh~rg---iiyrdlkldnvlldaeghikltdygmck 399 (593)
T KOG0695|consen 325 RLFFVIEYVNGGDLMFHMQRQR--KLPEEHARFYSAEICLALNFLHERG---IIYRDLKLDNVLLDAEGHIKLTDYGMCK 399 (593)
T ss_pred eEEEEEEEecCcceeeehhhhh--cCcHHHhhhhhHHHHHHHHHHhhcC---eeeeeccccceEEccCCceeecccchhh
Confidence 9999999999999988886654 4889999999999999999999999 9999999999999999999999999997
Q ss_pred cCCCCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCC
Q 003158 661 LAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPIS 720 (843)
Q Consensus 661 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~ 720 (843)
.- ..+...+...+||+.|+|||.+++..|...+|+|++||+++||+.|+.||+
T Consensus 400 e~-------l~~gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfd 452 (593)
T KOG0695|consen 400 EG-------LGPGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFD 452 (593)
T ss_pred cC-------CCCCcccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcc
Confidence 43 223455677899999999999999999999999999999999999999996
No 393
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=99.98 E-value=9.9e-34 Score=297.28 Aligned_cols=302 Identities=21% Similarity=0.278 Sum_probs=220.8
Q ss_pred CCcccccHHHHHHHHcCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCChhhHHHHHHHHHHHHhcc------CCc
Q 003158 496 DGVRSFTYGEMALATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLH------HRN 568 (843)
Q Consensus 496 ~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~------h~n 568 (843)
+...+|.+.-.++...+|.+....|+|-|++|.+|... .|..||||++...... .+.=+.|+++|++|. --|
T Consensus 417 DaEGYYrv~igE~LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~M-~KtGl~EleiLkKL~~AD~Edk~H 495 (752)
T KOG0670|consen 417 DAEGYYRVRIGELLDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEVM-HKTGLKELEILKKLNDADPEDKFH 495 (752)
T ss_pred cccceEEEehhhhhcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecchHH-hhhhhHHHHHHHHhhccCchhhhH
Confidence 34456777788888999999999999999999999965 4789999999864333 345578999999995 348
Q ss_pred ccceeeeeecCCcEEEEEecCCCCCHHHHHhhcCC-CCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcC
Q 003158 569 LVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSK-EPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDH 647 (843)
Q Consensus 569 Iv~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~-~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~ 647 (843)
+++++..|....++|||||-+ .-+|.++|+..+. ..+....+..++.|+.-||..|-..+ |+|.||||+||||++
T Consensus 496 clrl~r~F~hknHLClVFE~L-slNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c~---vlHaDIKPDNiLVNE 571 (752)
T KOG0670|consen 496 CLRLFRHFKHKNHLCLVFEPL-SLNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKCG---VLHADIKPDNILVNE 571 (752)
T ss_pred HHHHHHHhhhcceeEEEehhh-hchHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhcC---eeecccCccceEecc
Confidence 999999999999999999998 5699999987543 45888999999999999999999988 999999999999986
Q ss_pred C-CcEEEeeccccccCCCCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCcchH
Q 003158 648 K-FTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIV 726 (843)
Q Consensus 648 ~-~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~ 726 (843)
. ..+||||||.|......+ .+....+..|+|||++.+.+|+...|+||+||+||||.||+..|.+..+-.
T Consensus 572 ~k~iLKLCDfGSA~~~~ene---------itPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~ 642 (752)
T KOG0670|consen 572 SKNILKLCDFGSASFASENE---------ITPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQ 642 (752)
T ss_pred CcceeeeccCcccccccccc---------ccHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCCcHH
Confidence 5 478999999998765433 233445678999999999999999999999999999999999997655421
Q ss_pred HHHHHHhhcccchhhccCCCCCCCHHHHHHHHHHHHHhc---------ccC-----------CCCCCCHHHHHHHHHHhh
Q 003158 727 REVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCC---------QDE-----------TDARPSMSEVMRELESIW 786 (843)
Q Consensus 727 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~---------~~~-----------p~~RPs~~~vl~~L~~~~ 786 (843)
.+... -...+.+|..+...- ++..+-+ ..| +.-.|| .++...|....
T Consensus 643 -MLrl~----------me~KGk~p~KmlRKg-qF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPt-kdl~s~l~~~q 709 (752)
T KOG0670|consen 643 -MLRLF----------MELKGKFPNKMLRKG-QFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPT-KDLGSELIAVQ 709 (752)
T ss_pred -HHHHH----------HHhcCCCcHHHhhhc-chhhhhcccccceEEEeccccccceeEEEecccCcc-hhHHHHHhccC
Confidence 11100 001112222111100 0000000 000 011121 22333333221
Q ss_pred hhCCCC----CCCCCccccCCCCCCCCCCCCCccCCCCCcccC
Q 003158 787 NMMPES----DTKTPEFINSEHTSKEETPPSSSSMLKHPYVSS 825 (843)
Q Consensus 787 ~~~~~~----~~~~~dll~~~L~~dp~~R~sa~e~L~Hp~f~~ 825 (843)
. +|++ -.++.|||.+||..||++|+|..|||.||||+.
T Consensus 710 ~-~~deq~~~~~~~rdLLdkml~LdP~KRit~nqAL~HpFi~~ 751 (752)
T KOG0670|consen 710 R-LPDEQPKIVQQLRDLLDKMLILDPEKRITVNQALKHPFITE 751 (752)
T ss_pred C-CCchhHHHHHHHHHHHHHHhccChhhcCCHHHHhcCCcccC
Confidence 1 2222 133568999999999999999999999999975
No 394
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.97 E-value=1.2e-32 Score=285.66 Aligned_cols=297 Identities=22% Similarity=0.336 Sum_probs=217.2
Q ss_pred HHHHHHHcCCCCCCcccccCCeeEEEEEeC----CCcEEEEEEeccCChhhHHHHHHHHHHHHhc-cCCcccceeeeeec
Q 003158 504 GEMALATNNFNSSTQIGQGGYGKVYKGILP----DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDE 578 (843)
Q Consensus 504 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~ 578 (843)
+.+....+.|...++||+|.|++||+|.+. .++.||+|.+...+ ...++..|+++|..+ .+.||+++.+++..
T Consensus 29 q~~p~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts--~p~ri~~El~~L~~~gG~~ni~~~~~~~rn 106 (418)
T KOG1167|consen 29 QDIPFISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTS--SPSRILNELEMLYRLGGSDNIIKLNGCFRN 106 (418)
T ss_pred hhhhhhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeeccccc--CchHHHHHHHHHHHhccchhhhcchhhhcc
Confidence 345556778999999999999999999853 46899999987533 345789999999998 59999999999999
Q ss_pred CCcEEEEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcC-CCcEEEeecc
Q 003158 579 EGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDH-KFTAKVADFG 657 (843)
Q Consensus 579 ~~~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~-~~~~kl~DfG 657 (843)
.+..++|+||++...-.++... ++...+..+.+.+..||+++|+.| ||||||||+|+|.+. .+.-.|.|||
T Consensus 107 nd~v~ivlp~~~H~~f~~l~~~-----l~~~~i~~Yl~~ll~Al~~~h~~G---IvHRDiKpsNFL~n~~t~rg~LvDFg 178 (418)
T KOG1167|consen 107 NDQVAIVLPYFEHDRFRDLYRS-----LSLAEIRWYLRNLLKALAHLHKNG---IVHRDIKPSNFLYNRRTQRGVLVDFG 178 (418)
T ss_pred CCeeEEEecccCccCHHHHHhc-----CCHHHHHHHHHHHHHHhhhhhccC---ccccCCCccccccccccCCceEEech
Confidence 9999999999999999998854 567888899999999999999999 999999999999984 4678999999
Q ss_pred ccccCCCCC----CCC---------------------------------cccceeeeeecccCCccCchhccc-CCCCch
Q 003158 658 LSRLAPVPD----IEG---------------------------------IVPAHVSTVVKGTPGYLDPEYFLT-HKLTDK 699 (843)
Q Consensus 658 la~~~~~~~----~~~---------------------------------~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~ 699 (843)
+|...+... ... ...........||++|+|||++.. ...+++
T Consensus 179 LA~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~Qtta 258 (418)
T KOG1167|consen 179 LAQRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTA 258 (418)
T ss_pred hHHHHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCc
Confidence 997211000 000 000111234569999999999976 567889
Q ss_pred hhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhccCCCCCCCHHHHHHHHHHHHH--hcccCCCCCCCHHH
Q 003158 700 SDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALK--CCQDETDARPSMSE 777 (843)
Q Consensus 700 sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~--c~~~~p~~RPs~~~ 777 (843)
+||||.|+++.-+++++.||....+..+........ +-.....+...+-.+ -|++ ..+|+..+
T Consensus 259 iDiws~GVI~Lslls~~~PFf~a~dd~~al~ei~ti-------------fG~~~mrk~A~l~g~~~l~~k--sn~~~~~e 323 (418)
T KOG1167|consen 259 IDIWSAGVILLSLLSRRYPFFKAKDDADALAEIATI-------------FGSAEMRKCAALPGRILLWQK--SNIPTIPE 323 (418)
T ss_pred cceeeccceeehhhccccccccCccccchHHHHHHH-------------hChHHHHHHhhcCCceeeecc--ccccccHH
Confidence 999999999999999999998765543322221100 001111111111111 2332 34666666
Q ss_pred HHHHHHHhh-hhCCC--------------CCCCCCccccCCCCCCCCCCCCCccCCCCCcccC
Q 003158 778 VMRELESIW-NMMPE--------------SDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSS 825 (843)
Q Consensus 778 vl~~L~~~~-~~~~~--------------~~~~~~dll~~~L~~dp~~R~sa~e~L~Hp~f~~ 825 (843)
+....+.+. +.... ....+.||++++|..||.+|+||++||.||||..
T Consensus 324 ~~~~f~s~~~~~~~~~~q~n~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALkHpFF~~ 386 (418)
T KOG1167|consen 324 LRVNFETLHIESIYKSRQPNTEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALKHPFFDE 386 (418)
T ss_pred HHhchhccChhhcccccccceeeccccccccHHHHHHHHHHccCChhhcccHHHHhcCcCCcc
Confidence 665555541 11111 1124568999999999999999999999999973
No 395
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=99.97 E-value=6.7e-33 Score=307.58 Aligned_cols=256 Identities=27% Similarity=0.399 Sum_probs=195.8
Q ss_pred CCCCCCcccccCCe-eEEEEEeCCCcEEEEEEeccCChhhHHHHHHHHHHHHhc-cCCcccceeeeeecCCcEEEEEecC
Q 003158 512 NFNSSTQIGQGGYG-KVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQMLVYEFM 589 (843)
Q Consensus 512 ~~~~~~~lg~G~~g-~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~lV~e~~ 589 (843)
-|...+.+|.|+.| .||+|.. +|+.||||++-.. ..+-+.+|+..|+.- .|||||++++.-.+.++.||..|.|
T Consensus 510 ~~~~~eilG~Gs~Gt~Vf~G~y-e~R~VAVKrll~e---~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC 585 (903)
T KOG1027|consen 510 FFSPKEILGYGSNGTVVFRGVY-EGREVAVKRLLEE---FFDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELC 585 (903)
T ss_pred eeccHHHcccCCCCcEEEEEee-CCceehHHHHhhH---hHHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHh
Confidence 34445778999998 4799998 6789999988542 334568899999887 6999999999999999999999999
Q ss_pred CCCCHHHHHhhc--CCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcC---C--CcEEEeeccccccC
Q 003158 590 SNGTLRDQLSAK--SKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDH---K--FTAKVADFGLSRLA 662 (843)
Q Consensus 590 ~~gsL~~~l~~~--~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~---~--~~~kl~DfGla~~~ 662 (843)
..+|.+++... ..........+.+..|+++||++||+.+ ||||||||.|||++. + .+++|+|||+++.+
T Consensus 586 -~~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~---iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl 661 (903)
T KOG1027|consen 586 -ACSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLK---IVHRDLKPQNILISVPSADGTLRAKISDFGLSKKL 661 (903)
T ss_pred -hhhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhcc---cccccCCCceEEEEccCCCcceeEEeccccccccc
Confidence 56999999763 1111222455778999999999999988 999999999999976 3 47999999999988
Q ss_pred CCCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHh-CCCCCCCCcchHHHHHHHhhcccchhh
Q 003158 663 PVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSV 741 (843)
Q Consensus 663 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~ 741 (843)
..... .-.......||-+|+|||++....-+.++||||+||++|+.++ |.+||.+. ..++.+.
T Consensus 662 ~~~~s----S~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~--~~R~~NI---------- 725 (903)
T KOG1027|consen 662 AGGKS----SFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDS--LERQANI---------- 725 (903)
T ss_pred CCCcc----hhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCch--HHhhhhh----------
Confidence 65431 1222456789999999999999888889999999999999999 59999643 2232221
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCCCCccCCCCC
Q 003158 742 IDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHP 821 (843)
Q Consensus 742 ~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~sa~e~L~Hp 821 (843)
+.+... ..+++.+ .+..+.|||.+|+..||..||+|.++|.||
T Consensus 726 l~~~~~--------------L~~L~~~-----------------------~d~eA~dLI~~ml~~dP~~RPsa~~VL~HP 768 (903)
T KOG1027|consen 726 LTGNYT--------------LVHLEPL-----------------------PDCEAKDLISRMLNPDPQLRPSATDVLNHP 768 (903)
T ss_pred hcCccc--------------eeeeccC-----------------------chHHHHHHHHHhcCCCcccCCCHHHHhCCC
Confidence 111100 0011111 111455899999999999999999999999
Q ss_pred cccCCCC
Q 003158 822 YVSSDVS 828 (843)
Q Consensus 822 ~f~~~~~ 828 (843)
+|.....
T Consensus 769 lFW~~ek 775 (903)
T KOG1027|consen 769 LFWDSEK 775 (903)
T ss_pred ccCChHH
Confidence 9976543
No 396
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.97 E-value=7.4e-32 Score=288.60 Aligned_cols=210 Identities=22% Similarity=0.304 Sum_probs=174.3
Q ss_pred HcCCCCCCcccccCCeeEEEEEe-CCCcEEEEEEeccCChhh---HHHHHHHHHHHHhccCCcccceeeeeecCCcEEEE
Q 003158 510 TNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQG---EKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLV 585 (843)
Q Consensus 510 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV 585 (843)
..-|..++.||-|+||+|.++.. ++...+|.|.+.+...-. ...++.|-.||.....+=||+|+-.|.+.+.+|+|
T Consensus 628 KSmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnLYFV 707 (1034)
T KOG0608|consen 628 KSMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFV 707 (1034)
T ss_pred ccceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCceEEE
Confidence 34566778899999999999984 457789999987654332 34567899999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCC
Q 003158 586 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVP 665 (843)
Q Consensus 586 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~ 665 (843)
|||++||++-.+|-+.+ .+.+..++.++..+..|+++.|.+| +|||||||+|||||.+|.+||.|||++.-+...
T Consensus 708 MdYIPGGDmMSLLIrmg--IFeE~LARFYIAEltcAiesVHkmG---FIHRDiKPDNILIDrdGHIKLTDFGLCTGfRWT 782 (1034)
T KOG0608|consen 708 MDYIPGGDMMSLLIRMG--IFEEDLARFYIAELTCAIESVHKMG---FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWT 782 (1034)
T ss_pred EeccCCccHHHHHHHhc--cCHHHHHHHHHHHHHHHHHHHHhcc---ceecccCccceEEccCCceeeeeccccccceec
Confidence 99999999999986644 4888889999999999999999999 999999999999999999999999998533211
Q ss_pred C---CCC------------------cc--------------cceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHH
Q 003158 666 D---IEG------------------IV--------------PAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFL 710 (843)
Q Consensus 666 ~---~~~------------------~~--------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~ 710 (843)
. ++. .. ........+||+.|+|||++....++..+|+||.||+||
T Consensus 783 HdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvil~ 862 (1034)
T KOG0608|consen 783 HDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVILY 862 (1034)
T ss_pred cccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHHHH
Confidence 0 000 00 000112356999999999999999999999999999999
Q ss_pred HHHhCCCCCCCCcc
Q 003158 711 ELLTGMQPISHGKN 724 (843)
Q Consensus 711 elltg~~pf~~~~~ 724 (843)
||+.|+.||.....
T Consensus 863 em~~g~~pf~~~tp 876 (1034)
T KOG0608|consen 863 EMLVGQPPFLADTP 876 (1034)
T ss_pred HHhhCCCCccCCCC
Confidence 99999999986654
No 397
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=99.97 E-value=1.3e-31 Score=251.19 Aligned_cols=216 Identities=25% Similarity=0.377 Sum_probs=176.4
Q ss_pred HHHHHHcCCCCCCcccccCCeeEEEEEe-CCCcEEEEEEeccCC-hhhHHHHHHHHHHH-HhccCCcccceeeeeecCCc
Q 003158 505 EMALATNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGS-LQGEKEFLTEIQFL-SRLHHRNLVSLVGYCDEEGE 581 (843)
Q Consensus 505 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~~l-~~l~h~nIv~l~~~~~~~~~ 581 (843)
.++...+.......||+|++|.|-+-++ .+|+..|+|++...- .+..++..+|+.+. +...+|.+|.|+|....++.
T Consensus 40 ~~eV~ad~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regd 119 (282)
T KOG0984|consen 40 NFEVPADDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGD 119 (282)
T ss_pred ccccchhhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhcccc
Confidence 3455556666678899999999988884 589999999987532 33456788898864 45579999999999999999
Q ss_pred EEEEEecCCCCCHHHHHhh--cCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeecccc
Q 003158 582 QMLVYEFMSNGTLRDQLSA--KSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLS 659 (843)
Q Consensus 582 ~~lV~e~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla 659 (843)
.|+.||.|+ -||+.+-.+ .....+++...-+||..+.+||.|||++-+ +||||+||+|||++.+|++|+||||.+
T Consensus 120 vwIcME~M~-tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~--vIHRDvKPsNiLIn~~GqVKiCDFGIs 196 (282)
T KOG0984|consen 120 VWICMELMD-TSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKLS--VIHRDVKPSNILINYDGQVKICDFGIS 196 (282)
T ss_pred EEEeHHHhh-hhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHhh--hhhccCCcceEEEccCCcEEEcccccc
Confidence 999999995 488776544 345568899999999999999999999764 999999999999999999999999998
Q ss_pred ccCCCCCCCCcccceeeeeecccCCccCchhccc----CCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHH
Q 003158 660 RLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT----HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNI 731 (843)
Q Consensus 660 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~ 731 (843)
-.+.. +-..+...|...|||||.+.. ..|+-++||||+|+++.||.+++.||.......+++..
T Consensus 197 G~L~d--------SiAkt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~tpF~qLkq 264 (282)
T KOG0984|consen 197 GYLVD--------SIAKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESWGTPFQQLKQ 264 (282)
T ss_pred eeehh--------hhHHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccccCCHHHHHHH
Confidence 76542 112233568889999999964 36889999999999999999999999877766665553
No 398
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=99.97 E-value=1.4e-29 Score=263.44 Aligned_cols=187 Identities=35% Similarity=0.548 Sum_probs=165.5
Q ss_pred CCeeEEEEEeC-CCcEEEEEEeccCChhh-HHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEEecCCCCCHHHHHhh
Q 003158 523 GYGKVYKGILP-DGTVVAVKRAQEGSLQG-EKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSA 600 (843)
Q Consensus 523 ~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~ 600 (843)
+||.||+|... +++.+|+|++....... .+.+.+|++.+++++|+||+++++++......++||||+++++|.+++..
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~ 80 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLKK 80 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHHh
Confidence 58999999976 58999999998655444 67899999999999999999999999999999999999999999999976
Q ss_pred cCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCCCCcccceeeeeec
Q 003158 601 KSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVK 680 (843)
Q Consensus 601 ~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~ 680 (843)
... +++..++.++.++++++.|||+.+ ++|+||+|+||++++++.++|+|||.+....... ......
T Consensus 81 ~~~--~~~~~~~~~~~~l~~~l~~lh~~~---i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~--------~~~~~~ 147 (244)
T smart00220 81 RGR--LSEDEARFYARQILSALEYLHSNG---IIHRDLKPENILLDEDGHVKLADFGLARQLDPGG--------LLTTFV 147 (244)
T ss_pred ccC--CCHHHHHHHHHHHHHHHHHHHHcC---eecCCcCHHHeEECCCCcEEEccccceeeecccc--------cccccc
Confidence 443 788999999999999999999998 9999999999999999999999999998764321 223445
Q ss_pred ccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCC
Q 003158 681 GTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 722 (843)
Q Consensus 681 gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~ 722 (843)
++..|++||...+..++.++||||||++++++++|..||...
T Consensus 148 ~~~~~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~ 189 (244)
T smart00220 148 GTPEYMAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGD 189 (244)
T ss_pred CCcCCCCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 788999999999888999999999999999999999999763
No 399
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=99.96 E-value=9.4e-31 Score=278.51 Aligned_cols=281 Identities=22% Similarity=0.233 Sum_probs=191.5
Q ss_pred ccccccCCccccCCCCCCEEEccCCcCCccCccccCCCCCCcEEEcccCcCCccCccccccCCCCCEEEccCCccccCCC
Q 003158 3 NKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIP 82 (843)
Q Consensus 3 N~i~~~~p~~i~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~ 82 (843)
|+|+.+--.+|..-.++++|+|++|.|+..--+.|.+|.+|..|.|++|+|+...+..|.+|++|+.|+|..|+|.-+..
T Consensus 159 N~is~i~~~sfp~~~ni~~L~La~N~It~l~~~~F~~lnsL~tlkLsrNrittLp~r~Fk~L~~L~~LdLnrN~irive~ 238 (873)
T KOG4194|consen 159 NLISEIPKPSFPAKVNIKKLNLASNRITTLETGHFDSLNSLLTLKLSRNRITTLPQRSFKRLPKLESLDLNRNRIRIVEG 238 (873)
T ss_pred chhhcccCCCCCCCCCceEEeeccccccccccccccccchheeeecccCcccccCHHHhhhcchhhhhhccccceeeehh
Confidence 45553333445455566666666666666666666666666666666666665556666666666666666666664435
Q ss_pred cccCCCCCCceeeccCCCCCCCCCcccCCCCCCcEEEcCCCCCCCCCCCccccCCCCCcEEEcCCCCCCCCCCC-CCCCC
Q 003158 83 PELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMPD-LSRIP 161 (843)
Q Consensus 83 ~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~ 161 (843)
..|.++++|+.|.|..|+|...-...|..+.++++|+|+.|+++. .-..++.++++|+.|+|+.|.|..+..+ +..++
T Consensus 239 ltFqgL~Sl~nlklqrN~I~kL~DG~Fy~l~kme~l~L~~N~l~~-vn~g~lfgLt~L~~L~lS~NaI~rih~d~Wsftq 317 (873)
T KOG4194|consen 239 LTFQGLPSLQNLKLQRNDISKLDDGAFYGLEKMEHLNLETNRLQA-VNEGWLFGLTSLEQLDLSYNAIQRIHIDSWSFTQ 317 (873)
T ss_pred hhhcCchhhhhhhhhhcCcccccCcceeeecccceeecccchhhh-hhcccccccchhhhhccchhhhheeecchhhhcc
Confidence 556666666666666666665555666677777777777777764 2345667777777777777777776664 66777
Q ss_pred CCCEEEcccCcCCCCCCCCCCC--cCcCEEEccCCcCCCCCCcccCCCCCCcEEeCcCccCCCCCCchhhccccCCCCcc
Q 003158 162 NLGYLDLSSNQLNGSIPPGRLS--LNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATET 239 (843)
Q Consensus 162 ~L~~L~Ls~N~l~~~~p~~~~~--~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~l~~~~L 239 (843)
+|+.|+|++|+|+ .+++..+. ..|+.|+|++|.|+.+....|.++.+|++|||++|.|+..+-++-..... ++.|
T Consensus 318 kL~~LdLs~N~i~-~l~~~sf~~L~~Le~LnLs~Nsi~~l~e~af~~lssL~~LdLr~N~ls~~IEDaa~~f~g--l~~L 394 (873)
T KOG4194|consen 318 KLKELDLSSNRIT-RLDEGSFRVLSQLEELNLSHNSIDHLAEGAFVGLSSLHKLDLRSNELSWCIEDAAVAFNG--LPSL 394 (873)
T ss_pred cceeEeccccccc-cCChhHHHHHHHhhhhcccccchHHHHhhHHHHhhhhhhhcCcCCeEEEEEecchhhhcc--chhh
Confidence 7777777777777 55544332 26777777777777776777777777777778777777666654333333 4567
Q ss_pred eeEEcCCCCCCCCCCCC--cCCCCcEEEeccCc-----------------------ccccCCcccccCCCCCC
Q 003158 240 FILDFQNNNLTNISGSF--NIPPNVTVRLRGNP-----------------------FCLNTNAEQFCGSHSDD 287 (843)
Q Consensus 240 ~~L~l~~N~l~~~~~~~--~~~~l~~l~l~~Np-----------------------~~c~~~~~~~~~~~~~~ 287 (843)
+.|+|.+|+|..++... +++.|..|+|.+|+ |-|||++.|+-.|+-..
T Consensus 395 rkL~l~gNqlk~I~krAfsgl~~LE~LdL~~NaiaSIq~nAFe~m~Lk~Lv~nSssflCDCql~Wl~qWl~~~ 467 (873)
T KOG4194|consen 395 RKLRLTGNQLKSIPKRAFSGLEALEHLDLGDNAIASIQPNAFEPMELKELVMNSSSFLCDCQLKWLAQWLYRR 467 (873)
T ss_pred hheeecCceeeecchhhhccCcccceecCCCCcceeecccccccchhhhhhhcccceEEeccHHHHHHHHHhc
Confidence 77888888888887654 67888888887776 46999999999998643
No 400
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=99.95 E-value=4.8e-28 Score=302.74 Aligned_cols=265 Identities=29% Similarity=0.494 Sum_probs=243.6
Q ss_pred CccccccCCccccCCCCCCEEEccCCcCCccCccccCCCCCCcEEEcccCcCCccCccccccCCCCCEEEccCCccccCC
Q 003158 2 WNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQI 81 (843)
Q Consensus 2 ~N~i~~~~p~~i~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 81 (843)
+|++++.+|..+.++++|++|+|++|.+.+.+|..+.++++|++|++++|.+.+..|..+..+++|+.|+|++|.+++.+
T Consensus 269 ~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~ 348 (968)
T PLN00113 269 QNKLSGPIPPSIFSLQKLISLDLSDNSLSGEIPELVIQLQNLEILHLFSNNFTGKIPVALTSLPRLQVLQLWSNKFSGEI 348 (968)
T ss_pred CCeeeccCchhHhhccCcCEEECcCCeeccCCChhHcCCCCCcEEECCCCccCCcCChhHhcCCCCCEEECcCCCCcCcC
Confidence 68899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccCCCCCCceeeccCCCCCCCCCcccCCCCCCcEEEcCCCCCCCCCCCccccCCCCCcEEEcCCCCCCCCCC-CCCCC
Q 003158 82 PPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMP-DLSRI 160 (843)
Q Consensus 82 ~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~l 160 (843)
|..++.+++|+.|+|++|++++.+|..+..+++|+.|++++|.+.+ .+|..+..+++|+.|+|++|++++..+ .+..+
T Consensus 349 p~~l~~~~~L~~L~Ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~-~~p~~~~~~~~L~~L~L~~n~l~~~~p~~~~~l 427 (968)
T PLN00113 349 PKNLGKHNNLTVLDLSTNNLTGEIPEGLCSSGNLFKLILFSNSLEG-EIPKSLGACRSLRRVRLQDNSFSGELPSEFTKL 427 (968)
T ss_pred ChHHhCCCCCcEEECCCCeeEeeCChhHhCcCCCCEEECcCCEecc-cCCHHHhCCCCCCEEECcCCEeeeECChhHhcC
Confidence 9999999999999999999999999999999999999999999987 789999999999999999999998666 59999
Q ss_pred CCCCEEEcccCcCCCCCCCCCCC-cCcCEEEccCCcCCCCCCcccCCCCCCcEEeCcCccCCCCCCchhhccccCCCCcc
Q 003158 161 PNLGYLDLSSNQLNGSIPPGRLS-LNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATET 239 (843)
Q Consensus 161 ~~L~~L~Ls~N~l~~~~p~~~~~-~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~l~~~~L 239 (843)
++|+.|++++|.+++.+|..... .+|+.|+|++|.+.+.+|..+ ..++|+.|+|++|++++.+|..+..+.+ |
T Consensus 428 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~-~~~~L~~L~ls~n~l~~~~~~~~~~l~~-----L 501 (968)
T PLN00113 428 PLVYFLDISNNNLQGRINSRKWDMPSLQMLSLARNKFFGGLPDSF-GSKRLENLDLSRNQFSGAVPRKLGSLSE-----L 501 (968)
T ss_pred CCCCEEECcCCcccCccChhhccCCCCcEEECcCceeeeecCccc-ccccceEEECcCCccCCccChhhhhhhc-----c
Confidence 99999999999999888875443 489999999999999988866 4689999999999999999998876554 5
Q ss_pred eeEEcCCCCCCCCCC-CC-cCCCCcEEEeccCcccc
Q 003158 240 FILDFQNNNLTNISG-SF-NIPPNVTVRLRGNPFCL 273 (843)
Q Consensus 240 ~~L~l~~N~l~~~~~-~~-~~~~l~~l~l~~Np~~c 273 (843)
+.|+|++|++++..+ .+ .++.++.|+|++|.+..
T Consensus 502 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 537 (968)
T PLN00113 502 MQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQLSG 537 (968)
T ss_pred CEEECcCCcceeeCChHHcCccCCCEEECCCCcccc
Confidence 589999999986544 44 78999999999999864
No 401
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.95 E-value=2.6e-29 Score=271.96 Aligned_cols=300 Identities=20% Similarity=0.281 Sum_probs=223.6
Q ss_pred HcCCCCCCcccccCCeeEEEEEe-CCCcEEEEEEeccCChhhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEEec
Q 003158 510 TNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 588 (843)
Q Consensus 510 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e~ 588 (843)
.++|+...++|.|.+|.||||+. +.++..|+|+++.......+-+++|+-+++..+||||+.++|.+...+..|++|||
T Consensus 14 ~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwicMEy 93 (829)
T KOG0576|consen 14 QDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICMEY 93 (829)
T ss_pred ccchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhhhcCcEEEEEe
Confidence 35788899999999999999995 57999999999876666666778899999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCCC
Q 003158 589 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 668 (843)
Q Consensus 589 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 668 (843)
|.+|+|.+.-+. ..++++.++..+++..++||+|||+++ =+|||||-.||++++.|.+|++|||.+-.+...
T Consensus 94 cgggslQdiy~~--TgplselqiayvcRetl~gl~ylhs~g---k~hRdiKGanilltd~gDvklaDfgvsaqitat--- 165 (829)
T KOG0576|consen 94 CGGGSLQDIYHV--TGPLSELQIAYVCRETLQGLKYLHSQG---KIHRDIKGANILLTDEGDVKLADFGVSAQITAT--- 165 (829)
T ss_pred cCCCcccceeee--cccchhHHHHHHHhhhhccchhhhcCC---cccccccccceeecccCceeecccCchhhhhhh---
Confidence 999999998754 456899999999999999999999999 799999999999999999999999998654321
Q ss_pred CcccceeeeeecccCCccCchhcc---cCCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhccCC
Q 003158 669 GIVPAHVSTVVKGTPGYLDPEYFL---THKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGN 745 (843)
Q Consensus 669 ~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 745 (843)
-.......||+.|||||+.. .+.|...+|||+.|+...|+-.-+.|.++...... .+.. .....++.
T Consensus 166 ----i~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpmr~----l~Lm--TkS~~qpp 235 (829)
T KOG0576|consen 166 ----IAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMRA----LFLM--TKSGFQPP 235 (829)
T ss_pred ----hhhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchHHH----HHHh--hccCCCCC
Confidence 22335578999999999985 46789999999999999999887777664332111 0000 01122222
Q ss_pred CCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCCCC-ccCCCCCccc
Q 003158 746 MGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSS-SSMLKHPYVS 824 (843)
Q Consensus 746 ~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~sa-~e~L~Hp~f~ 824 (843)
...-+..+.+.+.++++.|+.++|++||++..+++. .+ -..+.....+.++|.++=..+|.-|--- .|.=.++|+.
T Consensus 236 ~lkDk~kws~~fh~fvK~altknpKkRptaeklL~h--~f-vs~~l~~rl~~eLLdK~n~P~~~v~~~~d~~~E~~~~i~ 312 (829)
T KOG0576|consen 236 TLKDKTKWSEFFHNFVKGALTKNPKKRPTAEKLLQH--PF-VSQTLSRRLAIELLDKVNNPNPVVRYLEDYDGEDYLWIP 312 (829)
T ss_pred cccCCccchHHHHHHHHHHhcCCCccCCChhhheec--ee-eccchhhHHHHHHHHHccCCCCcccccccCCcccccchh
Confidence 223356677888899999999999999998876641 11 1112223333455555555554333222 2222355655
Q ss_pred CCCCCC
Q 003158 825 SDVSGS 830 (843)
Q Consensus 825 ~~~~~~ 830 (843)
....+.
T Consensus 313 ~~i~s~ 318 (829)
T KOG0576|consen 313 MRICST 318 (829)
T ss_pred hhhhcC
Confidence 554443
No 402
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.95 E-value=1.7e-28 Score=261.43 Aligned_cols=196 Identities=25% Similarity=0.365 Sum_probs=169.4
Q ss_pred cCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCChhh--------HHHHHHHHHHHHhcc---CCcccceeeeeec
Q 003158 511 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQG--------EKEFLTEIQFLSRLH---HRNLVSLVGYCDE 578 (843)
Q Consensus 511 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~--------~~~~~~E~~~l~~l~---h~nIv~l~~~~~~ 578 (843)
..|.....+|+|+||.|+.|.++ +...|+||.+.+...-. ...+-.|++||..++ |+||++++++|++
T Consensus 561 s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFEd 640 (772)
T KOG1152|consen 561 SDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFED 640 (772)
T ss_pred ccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheeec
Confidence 46888999999999999999975 56789999887643211 123567999999997 9999999999999
Q ss_pred CCcEEEEEecC-CCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeecc
Q 003158 579 EGEQMLVYEFM-SNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFG 657 (843)
Q Consensus 579 ~~~~~lV~e~~-~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfG 657 (843)
++.+||+||-. ++.+|.+++..+. .+++.+...|+.||+.|+++||+.+ |||||||-+||.++.+|-+||+|||
T Consensus 641 dd~yyl~te~hg~gIDLFd~IE~kp--~m~E~eAk~IFkQV~agi~hlh~~~---ivhrdikdenvivd~~g~~klidfg 715 (772)
T KOG1152|consen 641 DDYYYLETEVHGEGIDLFDFIEFKP--RMDEPEAKLIFKQVVAGIKHLHDQG---IVHRDIKDENVIVDSNGFVKLIDFG 715 (772)
T ss_pred CCeeEEEecCCCCCcchhhhhhccC--ccchHHHHHHHHHHHhccccccccC---ceecccccccEEEecCCeEEEeecc
Confidence 99999999975 5679999997654 4889999999999999999999999 9999999999999999999999999
Q ss_pred ccccCCCCCCCCcccceeeeeecccCCccCchhcccCCCC-chhhhHHHHHHHHHHHhCCCCCC
Q 003158 658 LSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLT-DKSDVYSLGVVFLELLTGMQPIS 720 (843)
Q Consensus 658 la~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~sDvwS~G~~l~elltg~~pf~ 720 (843)
.|..... ......+||..|.|||++.+.+|- ..-|||++|++||.++....||.
T Consensus 716 saa~~ks---------gpfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyy 770 (772)
T KOG1152|consen 716 SAAYTKS---------GPFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYY 770 (772)
T ss_pred chhhhcC---------CCcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCc
Confidence 9987653 234567899999999999998874 56899999999999999888885
No 403
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.95 E-value=2.5e-26 Score=233.07 Aligned_cols=210 Identities=37% Similarity=0.605 Sum_probs=182.1
Q ss_pred ccccCCeeEEEEEeCC-CcEEEEEEeccCChh-hHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEEecCCCCCHHH
Q 003158 519 IGQGGYGKVYKGILPD-GTVVAVKRAQEGSLQ-GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRD 596 (843)
Q Consensus 519 lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e~~~~gsL~~ 596 (843)
||+|.+|.||++...+ ++.+++|++...... ..+.+.+|++.++.++|++|+++++++......+++|||+++++|.+
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~ 80 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKD 80 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHHH
Confidence 6899999999999754 899999999865433 34678999999999999999999999999899999999999999999
Q ss_pred HHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcC-CCcEEEeeccccccCCCCCCCCccccee
Q 003158 597 QLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDH-KFTAKVADFGLSRLAPVPDIEGIVPAHV 675 (843)
Q Consensus 597 ~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~-~~~~kl~DfGla~~~~~~~~~~~~~~~~ 675 (843)
++.... ..+++..++.++.++++++.|||+.+ ++|+||+|.||+++. ++.++|+|||.+........ .
T Consensus 81 ~~~~~~-~~~~~~~~~~~~~~l~~~l~~lh~~~---~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~-------~ 149 (215)
T cd00180 81 LLKENE-GKLSEDEILRILLQILEGLEYLHSNG---IIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKS-------L 149 (215)
T ss_pred HHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcc-------h
Confidence 997642 35788999999999999999999998 999999999999999 89999999999986543210 1
Q ss_pred eeeecccCCccCchhcccC-CCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhccCCCCCCCHHHH
Q 003158 676 STVVKGTPGYLDPEYFLTH-KLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECV 754 (843)
Q Consensus 676 ~~~~~gt~~y~aPE~~~~~-~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 754 (843)
.....+...|++||..... ..+.++|+|++|+++++|
T Consensus 150 ~~~~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l------------------------------------------ 187 (215)
T cd00180 150 LKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL------------------------------------------ 187 (215)
T ss_pred hhcccCCCCccChhHhcccCCCCchhhhHHHHHHHHHH------------------------------------------
Confidence 2334577889999999887 888999999999999998
Q ss_pred HHHHHHHHHhcccCCCCCCCHHHHHHH
Q 003158 755 EKFIKLALKCCQDETDARPSMSEVMRE 781 (843)
Q Consensus 755 ~~l~~l~~~c~~~~p~~RPs~~~vl~~ 781 (843)
..+.+++..|++.+|.+||++.++++.
T Consensus 188 ~~~~~~l~~~l~~~p~~R~~~~~l~~~ 214 (215)
T cd00180 188 PELKDLIRKMLQKDPEKRPSAKEILEH 214 (215)
T ss_pred HHHHHHHHHHhhCCcccCcCHHHHhhC
Confidence 456788999999999999999988753
No 404
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.94 E-value=3.9e-26 Score=234.89 Aligned_cols=199 Identities=36% Similarity=0.527 Sum_probs=172.8
Q ss_pred CCCCCcccccCCeeEEEEEeCC-CcEEEEEEeccCChh-hHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEEecCC
Q 003158 513 FNSSTQIGQGGYGKVYKGILPD-GTVVAVKRAQEGSLQ-GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMS 590 (843)
Q Consensus 513 ~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e~~~ 590 (843)
|...+.||+|++|.||+|...+ ++.+|+|.+...... ..+.+.+|++.+++++|+|++++++++......++++||++
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYCE 80 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEeccC
Confidence 4567889999999999999764 899999999875554 56788999999999999999999999999899999999999
Q ss_pred CCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCCCCc
Q 003158 591 NGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGI 670 (843)
Q Consensus 591 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~ 670 (843)
+++|.+++...... +++..+..++.+++.++.|||+.+ ++|+||+|+||+++.++.++|+|||.+.......
T Consensus 81 ~~~L~~~~~~~~~~-~~~~~~~~~~~~l~~~l~~lh~~~---i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~---- 152 (225)
T smart00221 81 GGDLFDYLRKKGGK-LSEEEARFYLRQILEALEYLHSLG---IVHRDLKPENILLGMDGLVKLADFGLARFIHRDL---- 152 (225)
T ss_pred CCCHHHHHHhcccC-CCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEeeCceeeEecCcc----
Confidence 99999999764322 788899999999999999999998 9999999999999999999999999998765321
Q ss_pred ccceeeeeecccCCccCchhc-ccCCCCchhhhHHHHHHHHHHHhCCCCCCC
Q 003158 671 VPAHVSTVVKGTPGYLDPEYF-LTHKLTDKSDVYSLGVVFLELLTGMQPISH 721 (843)
Q Consensus 671 ~~~~~~~~~~gt~~y~aPE~~-~~~~~~~~sDvwS~G~~l~elltg~~pf~~ 721 (843)
........++..|++||.. ....++.++|||+||++++||++|+.||..
T Consensus 153 --~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~ 202 (225)
T smart00221 153 --AALLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG 202 (225)
T ss_pred --cccccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence 0012334577889999998 667788899999999999999999999965
No 405
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.93 E-value=1.5e-26 Score=225.65 Aligned_cols=254 Identities=20% Similarity=0.299 Sum_probs=186.8
Q ss_pred HHcCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCChhhHHHHHHHHHHHHhc-cCCcccceeee-eecCCcEEEE
Q 003158 509 ATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRL-HHRNLVSLVGY-CDEEGEQMLV 585 (843)
Q Consensus 509 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~-~~~~~~~~lV 585 (843)
..+.|.+.+.+|+|.||.+-++.++ ..+.+|+|.+... ....++|.+|..---.+ .|.||+.-|+. |+..+..+++
T Consensus 22 l~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p-~tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~ 100 (378)
T KOG1345|consen 22 LEDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRP-QTTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFV 100 (378)
T ss_pred hhhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcc-hhhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEe
Confidence 3467899999999999999999975 5788999988753 33457899998754444 58999988775 6777889999
Q ss_pred EecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEc--CCCcEEEeeccccccCC
Q 003158 586 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLD--HKFTAKVADFGLSRLAP 663 (843)
Q Consensus 586 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~--~~~~~kl~DfGla~~~~ 663 (843)
+||++.|+|.+-+.. ..+.+...+.++.|++.|+.|+|++. +||||||.+|||+- +..++||+|||..+..+
T Consensus 101 qE~aP~gdL~snv~~---~GigE~~~K~v~~ql~SAi~fMHskn---lVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g 174 (378)
T KOG1345|consen 101 QEFAPRGDLRSNVEA---AGIGEANTKKVFAQLLSAIEFMHSKN---LVHRDLKAENILIFDADFYRVKLCDFGLTRKVG 174 (378)
T ss_pred eccCccchhhhhcCc---ccccHHHHHHHHHHHHHHHHHhhccc---hhhcccccceEEEecCCccEEEeeecccccccC
Confidence 999999999998854 34778889999999999999999999 99999999999983 34489999999987543
Q ss_pred CCCCCCcccceeeeeecccCCccCchhcccC-----CCCchhhhHHHHHHHHHHHhCCCCCCCCcchH-HHH-HHHhhcc
Q 003158 664 VPDIEGIVPAHVSTVVKGTPGYLDPEYFLTH-----KLTDKSDVYSLGVVFLELLTGMQPISHGKNIV-REV-NIAYQSS 736 (843)
Q Consensus 664 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~-~~~-~~~~~~~ 736 (843)
.. .....-+..|.|||..... ...+.+|||+||++++.++||+.||....... .++ ...++..
T Consensus 175 ~t----------V~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~~~~w~~r 244 (378)
T KOG1345|consen 175 TT----------VKYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWEWEQWLKR 244 (378)
T ss_pred ce----------ehhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCchHHHHHHHhcc
Confidence 21 1223345679999988642 35678999999999999999999997432111 111 1111111
Q ss_pred cchhhccCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 003158 737 MMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELES 784 (843)
Q Consensus 737 ~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~ 784 (843)
.. ...+..-.-+.+...++..+-+..++++|-...++.++...
T Consensus 245 k~-----~~~P~~F~~fs~~a~r~Fkk~lt~~~~drcki~~~kk~rk~ 287 (378)
T KOG1345|consen 245 KN-----PALPKKFNPFSEKALRLFKKSLTPRFKDRCKIWTAKKMRKC 287 (378)
T ss_pred cC-----ccCchhhcccCHHHHHHHHHhcCCcccccchhHHHHHHHHH
Confidence 11 11111112345677788888888999988655555544433
No 406
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=99.93 E-value=3e-27 Score=252.00 Aligned_cols=262 Identities=22% Similarity=0.264 Sum_probs=208.2
Q ss_pred CccccccCCccccCCCCCCEEEccCCcCCccCccccCCCCCCcEEEcccCcCCccCccccccCCCCCEEEccCCccccCC
Q 003158 2 WNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQI 81 (843)
Q Consensus 2 ~N~i~~~~p~~i~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 81 (843)
||+++.+-+..|.++++|+.++|..|.++ .+|...+...+|+.|+|.+|.|+.....+++.++.|+.||||.|.|+.+.
T Consensus 87 nNkl~~id~~~f~nl~nLq~v~l~~N~Lt-~IP~f~~~sghl~~L~L~~N~I~sv~se~L~~l~alrslDLSrN~is~i~ 165 (873)
T KOG4194|consen 87 NNKLSHIDFEFFYNLPNLQEVNLNKNELT-RIPRFGHESGHLEKLDLRHNLISSVTSEELSALPALRSLDLSRNLISEIP 165 (873)
T ss_pred ccccccCcHHHHhcCCcceeeeeccchhh-hcccccccccceeEEeeeccccccccHHHHHhHhhhhhhhhhhchhhccc
Confidence 78888888888889999999999999998 78876666777999999999998777888888888999999999888666
Q ss_pred CcccCCCCCCceeeccCCCCCCCCCcccCCCCCCcEEEcCCCCCCCCCCCccccCCCCCcEEEcCCCCCCCCCC-CCCCC
Q 003158 82 PPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMP-DLSRI 160 (843)
Q Consensus 82 ~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~l 160 (843)
-..|..-.++++|+|++|+|+..-...|.++.+|.+|.|++|+++. ..+..|.++++|+.|+|..|.|....- .|.++
T Consensus 166 ~~sfp~~~ni~~L~La~N~It~l~~~~F~~lnsL~tlkLsrNritt-Lp~r~Fk~L~~L~~LdLnrN~irive~ltFqgL 244 (873)
T KOG4194|consen 166 KPSFPAKVNIKKLNLASNRITTLETGHFDSLNSLLTLKLSRNRITT-LPQRSFKRLPKLESLDLNRNRIRIVEGLTFQGL 244 (873)
T ss_pred CCCCCCCCCceEEeeccccccccccccccccchheeeecccCcccc-cCHHHhhhcchhhhhhccccceeeehhhhhcCc
Confidence 6677777888888888888887777888888888888888888873 334577888888888888888875533 58888
Q ss_pred CCCCEEEcccCcCCCCCCCCCCC--cCcCEEEccCCcCCCCCCcccCCCCCCcEEeCcCccCCCCCCchhhccccCCCCc
Q 003158 161 PNLGYLDLSSNQLNGSIPPGRLS--LNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATE 238 (843)
Q Consensus 161 ~~L~~L~Ls~N~l~~~~p~~~~~--~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~l~~~~ 238 (843)
++|+.|.|..|.+. .+.++.+. .++++|+|+.|++...-..++-+|++|+.|+||+|.|+...++++.-.. +
T Consensus 245 ~Sl~nlklqrN~I~-kL~DG~Fy~l~kme~l~L~~N~l~~vn~g~lfgLt~L~~L~lS~NaI~rih~d~Wsftq-----k 318 (873)
T KOG4194|consen 245 PSLQNLKLQRNDIS-KLDDGAFYGLEKMEHLNLETNRLQAVNEGWLFGLTSLEQLDLSYNAIQRIHIDSWSFTQ-----K 318 (873)
T ss_pred hhhhhhhhhhcCcc-cccCcceeeecccceeecccchhhhhhcccccccchhhhhccchhhhheeecchhhhcc-----c
Confidence 88888888888887 56655443 2788888888888877777888888888888888888877777665443 4
Q ss_pred ceeEEcCCCCCCCCCCCC--cCCCCcEEEeccCcc
Q 003158 239 TFILDFQNNNLTNISGSF--NIPPNVTVRLRGNPF 271 (843)
Q Consensus 239 L~~L~l~~N~l~~~~~~~--~~~~l~~l~l~~Np~ 271 (843)
|+.|||++|+|+.+++.. .+..|..|+|+.|.+
T Consensus 319 L~~LdLs~N~i~~l~~~sf~~L~~Le~LnLs~Nsi 353 (873)
T KOG4194|consen 319 LKELDLSSNRITRLDEGSFRVLSQLEELNLSHNSI 353 (873)
T ss_pred ceeEeccccccccCChhHHHHHHHhhhhcccccch
Confidence 557888888888887654 567777777777765
No 407
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=99.92 E-value=2.6e-27 Score=253.42 Aligned_cols=259 Identities=28% Similarity=0.402 Sum_probs=166.1
Q ss_pred CCccccCCCCCCEEEccCCcCCccCccccCCCCCCcEEEcccCcCCccCccccccCCCCCEEEccCCccccCCCcccCCC
Q 003158 9 IPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRL 88 (843)
Q Consensus 9 ~p~~i~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l 88 (843)
||.+|..|..|+.||||+|+++ +.|..+..-+++-.|+||+|+|..+....|.+|+.|-.||||+|++. .+|.....+
T Consensus 95 iP~diF~l~dLt~lDLShNqL~-EvP~~LE~AKn~iVLNLS~N~IetIPn~lfinLtDLLfLDLS~NrLe-~LPPQ~RRL 172 (1255)
T KOG0444|consen 95 IPTDIFRLKDLTILDLSHNQLR-EVPTNLEYAKNSIVLNLSYNNIETIPNSLFINLTDLLFLDLSNNRLE-MLPPQIRRL 172 (1255)
T ss_pred CCchhcccccceeeecchhhhh-hcchhhhhhcCcEEEEcccCccccCCchHHHhhHhHhhhccccchhh-hcCHHHHHH
Confidence 4444444444555555555544 44444444444445555555544222233444444444455555544 344444444
Q ss_pred CCCceeeccCCCCCCCCCcccCCCCCCcEEEcCCCCCCCCCCCccccCCCCCcEEEcCCCCCCCCCCCCCCCCCCCEEEc
Q 003158 89 PSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDL 168 (843)
Q Consensus 89 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~L 168 (843)
.+|++|+|++|.+...--..+..+++|++|.+++.+-+-..+|.++..+.+|..+|||.|.+..+|..+..+++|+.|+|
T Consensus 173 ~~LqtL~Ls~NPL~hfQLrQLPsmtsL~vLhms~TqRTl~N~Ptsld~l~NL~dvDlS~N~Lp~vPecly~l~~LrrLNL 252 (1255)
T KOG0444|consen 173 SMLQTLKLSNNPLNHFQLRQLPSMTSLSVLHMSNTQRTLDNIPTSLDDLHNLRDVDLSENNLPIVPECLYKLRNLRRLNL 252 (1255)
T ss_pred hhhhhhhcCCChhhHHHHhcCccchhhhhhhcccccchhhcCCCchhhhhhhhhccccccCCCcchHHHhhhhhhheecc
Confidence 45555555555444222233344445555555554433345788888899999999999999988888999999999999
Q ss_pred ccCcCCCCCCCCCCCcCcCEEEccCCcCCCCCCcccCCCCCCcEEeCcCccCCCC-CCchhhccccCC------------
Q 003158 169 SSNQLNGSIPPGRLSLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGS-IPSSIWQSRTLN------------ 235 (843)
Q Consensus 169 s~N~l~~~~p~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~-~p~~~~~l~~l~------------ 235 (843)
|+|+|+..--......+|++|+||+|+|+ ..|.++..|++|+.|++.+|+|+-. +|+.++++.+|+
T Consensus 253 S~N~iteL~~~~~~W~~lEtLNlSrNQLt-~LP~avcKL~kL~kLy~n~NkL~FeGiPSGIGKL~~Levf~aanN~LElV 331 (1255)
T KOG0444|consen 253 SGNKITELNMTEGEWENLETLNLSRNQLT-VLPDAVCKLTKLTKLYANNNKLTFEGIPSGIGKLIQLEVFHAANNKLELV 331 (1255)
T ss_pred CcCceeeeeccHHHHhhhhhhccccchhc-cchHHHhhhHHHHHHHhccCcccccCCccchhhhhhhHHHHhhccccccC
Confidence 99999832222222348999999999999 8899999999999999999998744 788887776552
Q ss_pred ------CCcceeEEcCCCCCCCCCCCC-cCCCCcEEEeccCc
Q 003158 236 ------ATETFILDFQNNNLTNISGSF-NIPPNVTVRLRGNP 270 (843)
Q Consensus 236 ------~~~L~~L~l~~N~l~~~~~~~-~~~~l~~l~l~~Np 270 (843)
...|+.|.|+.|+|-++|..+ -++.+..|+++.||
T Consensus 332 PEglcRC~kL~kL~L~~NrLiTLPeaIHlL~~l~vLDlreNp 373 (1255)
T KOG0444|consen 332 PEGLCRCVKLQKLKLDHNRLITLPEAIHLLPDLKVLDLRENP 373 (1255)
T ss_pred chhhhhhHHHHHhcccccceeechhhhhhcCCcceeeccCCc
Confidence 244556777777777776665 46777777777776
No 408
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.92 E-value=2.9e-25 Score=270.04 Aligned_cols=201 Identities=19% Similarity=0.183 Sum_probs=133.8
Q ss_pred hccC-Ccccceeeee-------ecCCcEEEEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEE
Q 003158 563 RLHH-RNLVSLVGYC-------DEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVF 634 (843)
Q Consensus 563 ~l~h-~nIv~l~~~~-------~~~~~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ii 634 (843)
.++| +||++++++| .+.+..+.++||+ +++|.+++... ...+++.+++.++.||++||+|||+++ |+
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~al~~lH~~g---Iv 102 (793)
T PLN00181 28 SLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNP-DRSVDAFECFHVFRQIVEIVNAAHSQG---IV 102 (793)
T ss_pred hhhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhcc-cccccHHHHHHHHHHHHHHHHHHHhCC---ee
Confidence 3455 6888898887 2334677889988 67999999653 345899999999999999999999999 99
Q ss_pred eccCCCCcEEEcCCCcEE-------------------EeeccccccCCCCC---CC------CcccceeeeeecccCCcc
Q 003158 635 HRDIKASNILLDHKFTAK-------------------VADFGLSRLAPVPD---IE------GIVPAHVSTVVKGTPGYL 686 (843)
Q Consensus 635 H~Dlkp~NILl~~~~~~k-------------------l~DfGla~~~~~~~---~~------~~~~~~~~~~~~gt~~y~ 686 (843)
||||||+|||++..+.+| ++|||+++...... .. ............||+.||
T Consensus 103 HrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~ 182 (793)
T PLN00181 103 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYT 182 (793)
T ss_pred eccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceE
Confidence 999999999996655554 55555554321000 00 000000112245888999
Q ss_pred CchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhccCCCCCCCHHHHHHHHHHHHHhcc
Q 003158 687 DPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQ 766 (843)
Q Consensus 687 aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~ 766 (843)
|||++.+..++.++|||||||+||||++|..|+............ .. .+............++..||+
T Consensus 183 APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~~~~~~~~~--------~~----~~~~~~~~~~~~~~~~~~~L~ 250 (793)
T PLN00181 183 SPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKSRTMSSLRH--------RV----LPPQILLNWPKEASFCLWLLH 250 (793)
T ss_pred ChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHHHHHHHHHH--------hh----cChhhhhcCHHHHHHHHHhCC
Confidence 999999999999999999999999999988876432211111100 00 011111112334456666777
Q ss_pred cCCCCCCCHHHHHH
Q 003158 767 DETDARPSMSEVMR 780 (843)
Q Consensus 767 ~~p~~RPs~~~vl~ 780 (843)
++|.+||++.++++
T Consensus 251 ~~P~~Rps~~eil~ 264 (793)
T PLN00181 251 PEPSCRPSMSELLQ 264 (793)
T ss_pred CChhhCcChHHHhh
Confidence 77777777777654
No 409
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.91 E-value=4.2e-25 Score=215.18 Aligned_cols=247 Identities=18% Similarity=0.343 Sum_probs=197.2
Q ss_pred CCcccccCCeeEEEEEeCCCcEEEEEEeccCCh--hhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEEecCCCCC
Q 003158 516 STQIGQGGYGKVYKGILPDGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGT 593 (843)
Q Consensus 516 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e~~~~gs 593 (843)
..+|.+...|..|+|+|+. ..+++|++.-... ...++|..|.-.|+-+.||||++++|.|.......++..||+.|+
T Consensus 195 ~tkl~e~hsgelwrgrwqg-ndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsppnlv~isq~mp~gs 273 (448)
T KOG0195|consen 195 ITKLAESHSGELWRGRWQG-NDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQYMPFGS 273 (448)
T ss_pred hhhhccCCCcccccccccC-cchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEeeeeccchH
Confidence 4468899999999999964 4556677653222 224689999999999999999999999999999999999999999
Q ss_pred HHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCCCCcccc
Q 003158 594 LRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPA 673 (843)
Q Consensus 594 L~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~ 673 (843)
|+..+++...-..+..++.+++.+||+|++|||+.. |-|-.--|.+..|++|++.+++|+= +-+++ +
T Consensus 274 lynvlhe~t~vvvd~sqav~faldiargmaflhsle-p~ipr~~lns~hvmidedltarism-ad~kf-----------s 340 (448)
T KOG0195|consen 274 LYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSLE-PMIPRFYLNSKHVMIDEDLTARISM-ADTKF-----------S 340 (448)
T ss_pred HHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhcc-hhhhhhhcccceEEecchhhhheec-cccee-----------e
Confidence 999999988777888999999999999999999975 3344446889999999999888751 11111 1
Q ss_pred eeeeeecccCCccCchhcccCCCC---chhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhccCCCCCCC
Q 003158 674 HVSTVVKGTPGYLDPEYFLTHKLT---DKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYP 750 (843)
Q Consensus 674 ~~~~~~~gt~~y~aPE~~~~~~~~---~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 750 (843)
.......-.+.||+||.+...+-+ .++|+|||++++||+.|+..||.+-...+- .+.-.+++.+...|
T Consensus 341 fqe~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmec---------gmkialeglrv~ip 411 (448)
T KOG0195|consen 341 FQEVGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMEC---------GMKIALEGLRVHIP 411 (448)
T ss_pred eeccccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhh---------hhhhhhccccccCC
Confidence 111223456899999999875533 478999999999999999999987654322 22234455666778
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHh
Q 003158 751 SECVEKFIKLALKCCQDETDARPSMSEVMRELESI 785 (843)
Q Consensus 751 ~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~ 785 (843)
+..+..+.+++.-|..+||.+||.+..++-.|+++
T Consensus 412 pgis~hm~klm~icmnedpgkrpkfdmivpilekm 446 (448)
T KOG0195|consen 412 PGISRHMNKLMNICMNEDPGKRPKFDMIVPILEKM 446 (448)
T ss_pred CCccHHHHHHHHHHhcCCCCcCCCcceehhhHHHh
Confidence 88999999999999999999999999999888875
No 410
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.91 E-value=2.7e-27 Score=242.26 Aligned_cols=264 Identities=22% Similarity=0.285 Sum_probs=172.7
Q ss_pred CCCEEEccCCcCCccCccccCCCCCCcEEEcccCcCCccCccccccCCCCCEEEc-cCCccccCCCcccCCCCCCceeec
Q 003158 18 SLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHM-NNNSISGQIPPELSRLPSLVHMLL 96 (843)
Q Consensus 18 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L-s~N~l~~~~~~~l~~l~~L~~L~L 96 (843)
....++|..|+|+.+.+.+|+.+++|+.|||++|+|+.+.|++|.++++|.+|-+ ++|+|+.+....|.++..|+.|.+
T Consensus 68 ~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI~~l~k~~F~gL~slqrLll 147 (498)
T KOG4237|consen 68 ETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKITDLPKGAFGGLSSLQRLLL 147 (498)
T ss_pred cceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCchhhhhhhHhhhHHHHHHHhc
Confidence 4555666666666666666666666666666666666666666666666555533 336666554555666666666666
Q ss_pred cCCCCCCCCCcccCCCCCCcEEEcCCCCCCCCCCCc-cccCCCCCcEEEcCCCCC-------------------------
Q 003158 97 DNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPA-SYSNMSKLLKLSLRNCSL------------------------- 150 (843)
Q Consensus 97 ~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~-~~~~l~~L~~L~L~~N~l------------------------- 150 (843)
.-|++.-+..+.|..+++|..|.|-+|.+. .++. .|..+.+++.+.+..|.+
T Consensus 148 Nan~i~Cir~~al~dL~~l~lLslyDn~~q--~i~~~tf~~l~~i~tlhlA~np~icdCnL~wla~~~a~~~ietsgarc 225 (498)
T KOG4237|consen 148 NANHINCIRQDALRDLPSLSLLSLYDNKIQ--SICKGTFQGLAAIKTLHLAQNPFICDCNLPWLADDLAMNPIETSGARC 225 (498)
T ss_pred ChhhhcchhHHHHHHhhhcchhcccchhhh--hhccccccchhccchHhhhcCccccccccchhhhHHhhchhhccccee
Confidence 666666555566666666666666666664 2333 556666666666655552
Q ss_pred -----------CCCCCC-CC-CCCCCCEEEcccCcCCCCCCCCCCC--cCcCEEEccCCcCCCCCCcccCCCCCCcEEeC
Q 003158 151 -----------QGPMPD-LS-RIPNLGYLDLSSNQLNGSIPPGRLS--LNITTIKLSNNKLTGTIPSNFSGLPRLQRLFI 215 (843)
Q Consensus 151 -----------~~~~~~-~~-~l~~L~~L~Ls~N~l~~~~p~~~~~--~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 215 (843)
..+... |. .+.++..--.+.+...+..|...+. .+|++|+|++|+|+.+-+.+|.++..+++|+|
T Consensus 226 ~~p~rl~~~Ri~q~~a~kf~c~~esl~s~~~~~d~~d~~cP~~cf~~L~~L~~lnlsnN~i~~i~~~aFe~~a~l~eL~L 305 (498)
T KOG4237|consen 226 VSPYRLYYKRINQEDARKFLCSLESLPSRLSSEDFPDSICPAKCFKKLPNLRKLNLSNNKITRIEDGAFEGAAELQELYL 305 (498)
T ss_pred cchHHHHHHHhcccchhhhhhhHHhHHHhhccccCcCCcChHHHHhhcccceEeccCCCccchhhhhhhcchhhhhhhhc
Confidence 211111 11 1111111111222222233433332 38999999999999999999999999999999
Q ss_pred cCccCCCCCCchhhccccCCCCcceeEEcCCCCCCCCCCCC--cCCCCcEEEeccCcccccCCcccccCCCCCCC
Q 003158 216 ANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGSF--NIPPNVTVRLRGNPFCLNTNAEQFCGSHSDDD 288 (843)
Q Consensus 216 ~~N~l~~~~p~~~~~l~~l~~~~L~~L~l~~N~l~~~~~~~--~~~~l~~l~l~~Np~~c~~~~~~~~~~~~~~~ 288 (843)
..|+|....-..|.++ ..|+.|+|.+|+|+.+.+.. .+..+.+|++-.|||+|+|.+.|+-+|+.+..
T Consensus 306 ~~N~l~~v~~~~f~~l-----s~L~tL~L~~N~it~~~~~aF~~~~~l~~l~l~~Np~~CnC~l~wl~~Wlr~~~ 375 (498)
T KOG4237|consen 306 TRNKLEFVSSGMFQGL-----SGLKTLSLYDNQITTVAPGAFQTLFSLSTLNLLSNPFNCNCRLAWLGEWLRKKS 375 (498)
T ss_pred CcchHHHHHHHhhhcc-----ccceeeeecCCeeEEEecccccccceeeeeehccCcccCccchHHHHHHHhhCC
Confidence 9999985555555444 45668999999999997654 67889999999999999999999999997654
No 411
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=99.90 E-value=7.4e-27 Score=239.15 Aligned_cols=256 Identities=25% Similarity=0.428 Sum_probs=233.0
Q ss_pred CccccccCCccccCCCCCCEEEccCCcCCccCccccCCCCCCcEEEcccCcCCccCccccccCCCCCEEEccCCccccCC
Q 003158 2 WNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQI 81 (843)
Q Consensus 2 ~N~i~~~~p~~i~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 81 (843)
+|+++ .+-+++.++..|.+|++++|++. ..|.+++.+..++.|+.++|++. .+|..+..+.+|..|+++.|.+. .+
T Consensus 54 ~N~l~-~l~~dl~nL~~l~vl~~~~n~l~-~lp~aig~l~~l~~l~vs~n~ls-~lp~~i~s~~~l~~l~~s~n~~~-el 129 (565)
T KOG0472|consen 54 HNDLE-VLREDLKNLACLTVLNVHDNKLS-QLPAAIGELEALKSLNVSHNKLS-ELPEQIGSLISLVKLDCSSNELK-EL 129 (565)
T ss_pred cCchh-hccHhhhcccceeEEEeccchhh-hCCHHHHHHHHHHHhhcccchHh-hccHHHhhhhhhhhhhcccccee-ec
Confidence 46666 45567889999999999999999 89999999999999999999999 89999999999999999999999 77
Q ss_pred CcccCCCCCCceeeccCCCCCCCCCcccCCCCCCcEEEcCCCCCCCCCCCccccCCCCCcEEEcCCCCCCCCCCCCCCCC
Q 003158 82 PPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMPDLSRIP 161 (843)
Q Consensus 82 ~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~ 161 (843)
++.++.+-.|+.++..+|+++ ..|..+..+.+|..|++.+|++. ..|...-+++.|++||+.+|-++.+|++++.+.
T Consensus 130 ~~~i~~~~~l~dl~~~~N~i~-slp~~~~~~~~l~~l~~~~n~l~--~l~~~~i~m~~L~~ld~~~N~L~tlP~~lg~l~ 206 (565)
T KOG0472|consen 130 PDSIGRLLDLEDLDATNNQIS-SLPEDMVNLSKLSKLDLEGNKLK--ALPENHIAMKRLKHLDCNSNLLETLPPELGGLE 206 (565)
T ss_pred CchHHHHhhhhhhhccccccc-cCchHHHHHHHHHHhhccccchh--hCCHHHHHHHHHHhcccchhhhhcCChhhcchh
Confidence 888999999999999999999 78889999999999999999996 567767679999999999999999999999999
Q ss_pred CCCEEEcccCcCCCCCCCCCCCcCcCEEEccCCcCCCCCCcc-cCCCCCCcEEeCcCccCCCCCCchhhccccCCCCcce
Q 003158 162 NLGYLDLSSNQLNGSIPPGRLSLNITTIKLSNNKLTGTIPSN-FSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETF 240 (843)
Q Consensus 162 ~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~Ls~N~l~~~~p~~-~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~l~~~~L~ 240 (843)
+|+.|+|.+|+|. .+|.......|+.|+++.|+|+ .+|.+ ...+++|..|||.+|++. ++|+.+..+++|+
T Consensus 207 ~L~~LyL~~Nki~-~lPef~gcs~L~Elh~g~N~i~-~lpae~~~~L~~l~vLDLRdNklk-e~Pde~clLrsL~----- 278 (565)
T KOG0472|consen 207 SLELLYLRRNKIR-FLPEFPGCSLLKELHVGENQIE-MLPAEHLKHLNSLLVLDLRDNKLK-EVPDEICLLRSLE----- 278 (565)
T ss_pred hhHHHHhhhcccc-cCCCCCccHHHHHHHhcccHHH-hhHHHHhcccccceeeeccccccc-cCchHHHHhhhhh-----
Confidence 9999999999999 8887666668999999999999 55554 559999999999999999 8999999888776
Q ss_pred eEEcCCCCCCCCCCCCcCCCCcEEEeccCccc
Q 003158 241 ILDFQNNNLTNISGSFNIPPNVTVRLRGNPFC 272 (843)
Q Consensus 241 ~L~l~~N~l~~~~~~~~~~~l~~l~l~~Np~~ 272 (843)
.||+|+|.|+++|.+.+--.+..|.+.|||+.
T Consensus 279 rLDlSNN~is~Lp~sLgnlhL~~L~leGNPlr 310 (565)
T KOG0472|consen 279 RLDLSNNDISSLPYSLGNLHLKFLALEGNPLR 310 (565)
T ss_pred hhcccCCccccCCcccccceeeehhhcCCchH
Confidence 79999999999999884338999999999984
No 412
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.90 E-value=2.5e-23 Score=205.77 Aligned_cols=168 Identities=21% Similarity=0.291 Sum_probs=125.6
Q ss_pred CCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCCCCcc
Q 003158 592 GTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIV 671 (843)
Q Consensus 592 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~ 671 (843)
|+|.++++.. ..++++..++.++.|+++||+|||+++ ||+||+++.++.+|+ ||.++.....
T Consensus 1 GsL~~~l~~~-~~~l~~~~~~~i~~qi~~~L~~lH~~~---------kp~Nil~~~~~~~~~--fG~~~~~~~~------ 62 (176)
T smart00750 1 VSLADILEVR-GRPLNEEEIWAVCLQCLRALRELHRQA---------KSGNILLTWDGLLKL--DGSVAFKTPE------ 62 (176)
T ss_pred CcHHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHhcC---------CcccEeEcCccceee--ccceEeeccc------
Confidence 7899999754 346999999999999999999999876 999999999999999 9998765321
Q ss_pred cceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhccCCCCCCCH
Q 003158 672 PAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPS 751 (843)
Q Consensus 672 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 751 (843)
...||+.|||||++.+..++.++|||||||++|||+||+.||.................. . ........+.
T Consensus 63 ------~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~ 133 (176)
T smart00750 63 ------QSRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMP--A-DDPRDRSNLE 133 (176)
T ss_pred ------cCCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhc--c-CCccccccHH
Confidence 125889999999999999999999999999999999999999754332222221110000 0 0000011223
Q ss_pred HHHH--HHHHHHHHhcccCCCCCCCHHHHHHHHHHhh
Q 003158 752 ECVE--KFIKLALKCCQDETDARPSMSEVMRELESIW 786 (843)
Q Consensus 752 ~~~~--~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~ 786 (843)
.... .+.+++.+||..+|.+||++.++++.+....
T Consensus 134 ~~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~~ 170 (176)
T smart00750 134 SVSAARSFADFMRVCASRLPQRREAANHYLAHCRALF 170 (176)
T ss_pred HHHhhhhHHHHHHHHHhcccccccCHHHHHHHHHHHH
Confidence 3333 5888888888888888888888888776553
No 413
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=99.90 E-value=7.4e-26 Score=231.85 Aligned_cols=260 Identities=28% Similarity=0.479 Sum_probs=183.1
Q ss_pred CccccccCCccccCCCCCCEEEccCCcCCccCccccCCCCCCcEEEcccCcCCccCccccccCCCCCEEEccCCccccCC
Q 003158 2 WNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQI 81 (843)
Q Consensus 2 ~N~i~~~~p~~i~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 81 (843)
+|+|+ ++|+++.++.+|..|++.+|+++...|+.+. ++.|++||...|.++ .+|..++.+.+|..|+|..|+|. .+
T Consensus 146 ~N~i~-slp~~~~~~~~l~~l~~~~n~l~~l~~~~i~-m~~L~~ld~~~N~L~-tlP~~lg~l~~L~~LyL~~Nki~-~l 221 (565)
T KOG0472|consen 146 NNQIS-SLPEDMVNLSKLSKLDLEGNKLKALPENHIA-MKRLKHLDCNSNLLE-TLPPELGGLESLELLYLRRNKIR-FL 221 (565)
T ss_pred ccccc-cCchHHHHHHHHHHhhccccchhhCCHHHHH-HHHHHhcccchhhhh-cCChhhcchhhhHHHHhhhcccc-cC
Confidence 56777 7777888888888888888888854444444 788888888888777 67777888888888888888887 55
Q ss_pred CcccCCCCCCceeeccCCCCCCCCCc-ccCCCCCCcEEEcCCCCCCCCCCCccccCCCCCcEEEcCCCCCCCCCCCCCCC
Q 003158 82 PPELSRLPSLVHMLLDNNNLTGYLPP-ELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMPDLSRI 160 (843)
Q Consensus 82 ~~~l~~l~~L~~L~L~~N~l~~~~~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l 160 (843)
| .|.++..|.+|+++.|+|+ .+|. ...++++|.+|||.+|++. +.|..++-+.+|+.||+++|.|+++++.++++
T Consensus 222 P-ef~gcs~L~Elh~g~N~i~-~lpae~~~~L~~l~vLDLRdNklk--e~Pde~clLrsL~rLDlSNN~is~Lp~sLgnl 297 (565)
T KOG0472|consen 222 P-EFPGCSLLKELHVGENQIE-MLPAEHLKHLNSLLVLDLRDNKLK--EVPDEICLLRSLERLDLSNNDISSLPYSLGNL 297 (565)
T ss_pred C-CCCccHHHHHHHhcccHHH-hhHHHHhcccccceeeeccccccc--cCchHHHHhhhhhhhcccCCccccCCcccccc
Confidence 5 6777777777777777777 3443 3447777777777777775 56777777777777777777777777777776
Q ss_pred CCCCEEEcccCcCCC-----------------------------------------------------------------
Q 003158 161 PNLGYLDLSSNQLNG----------------------------------------------------------------- 175 (843)
Q Consensus 161 ~~L~~L~Ls~N~l~~----------------------------------------------------------------- 175 (843)
.|+.|-+-+|.+..
T Consensus 298 -hL~~L~leGNPlrTiRr~ii~~gT~~vLKyLrs~~~~dglS~se~~~e~~~t~~~~~~~~~~~~i~tkiL~~s~~qlt~ 376 (565)
T KOG0472|consen 298 -HLKFLALEGNPLRTIRREIISKGTQEVLKYLRSKIKDDGLSQSEGGTETAMTLPSESFPDIYAIITTKILDVSDKQLTL 376 (565)
T ss_pred -eeeehhhcCCchHHHHHHHHcccHHHHHHHHHHhhccCCCCCCcccccccCCCCCCcccchhhhhhhhhhccccccccc
Confidence 67777666665530
Q ss_pred -------------------------CCCC------------------------CCCC-cCcCEEEccCCcCCCCCCcccC
Q 003158 176 -------------------------SIPP------------------------GRLS-LNITTIKLSNNKLTGTIPSNFS 205 (843)
Q Consensus 176 -------------------------~~p~------------------------~~~~-~~L~~L~Ls~N~l~~~~p~~~~ 205 (843)
.+|. .... .+|..|+|++|-+. .+|..++
T Consensus 377 VPdEVfea~~~~~Vt~VnfskNqL~elPk~L~~lkelvT~l~lsnn~isfv~~~l~~l~kLt~L~L~NN~Ln-~LP~e~~ 455 (565)
T KOG0472|consen 377 VPDEVFEAAKSEIVTSVNFSKNQLCELPKRLVELKELVTDLVLSNNKISFVPLELSQLQKLTFLDLSNNLLN-DLPEEMG 455 (565)
T ss_pred CCHHHHHHhhhcceEEEecccchHhhhhhhhHHHHHHHHHHHhhcCccccchHHHHhhhcceeeecccchhh-hcchhhh
Confidence 1111 1111 15666777776666 6677777
Q ss_pred CCCCCcEEeCcCccCCCCCCchhhccccC-------------------CCCcceeEEcCCCCCCCCCCCC-cCCCCcEEE
Q 003158 206 GLPRLQRLFIANNSLSGSIPSSIWQSRTL-------------------NATETFILDFQNNNLTNISGSF-NIPPNVTVR 265 (843)
Q Consensus 206 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~l-------------------~~~~L~~L~l~~N~l~~~~~~~-~~~~l~~l~ 265 (843)
.+..|+.|+++.|+|. .+|..+..+..+ .+.+|.+|||++|.|+.+|+.. ++.++++|.
T Consensus 456 ~lv~Lq~LnlS~NrFr-~lP~~~y~lq~lEtllas~nqi~~vd~~~l~nm~nL~tLDL~nNdlq~IPp~LgnmtnL~hLe 534 (565)
T KOG0472|consen 456 SLVRLQTLNLSFNRFR-MLPECLYELQTLETLLASNNQIGSVDPSGLKNMRNLTTLDLQNNDLQQIPPILGNMTNLRHLE 534 (565)
T ss_pred hhhhhheecccccccc-cchHHHhhHHHHHHHHhccccccccChHHhhhhhhcceeccCCCchhhCChhhccccceeEEE
Confidence 7777777777777765 455433222111 2356779999999999999887 789999999
Q ss_pred eccCccc
Q 003158 266 LRGNPFC 272 (843)
Q Consensus 266 l~~Np~~ 272 (843)
+.||||.
T Consensus 535 L~gNpfr 541 (565)
T KOG0472|consen 535 LDGNPFR 541 (565)
T ss_pred ecCCccC
Confidence 9999986
No 414
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.90 E-value=2.7e-23 Score=224.58 Aligned_cols=174 Identities=18% Similarity=0.201 Sum_probs=132.9
Q ss_pred HHHHHHcCCCCCCcccccCCeeEEEEEeC--CCcEEEEEEeccC-----ChhhHHHHHHHHHHHHhccCCcccc-eeeee
Q 003158 505 EMALATNNFNSSTQIGQGGYGKVYKGILP--DGTVVAVKRAQEG-----SLQGEKEFLTEIQFLSRLHHRNLVS-LVGYC 576 (843)
Q Consensus 505 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~--~~~~vavK~~~~~-----~~~~~~~~~~E~~~l~~l~h~nIv~-l~~~~ 576 (843)
......++|...+.||+|+||+||+|... +++.||||++... .....+.+.+|+++|+.++|+|+++ ++++
T Consensus 12 ~~~~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~- 90 (365)
T PRK09188 12 QIPALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLAT- 90 (365)
T ss_pred ccccccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEc-
Confidence 34455678999999999999999999864 5788899987532 1223457899999999999999985 4432
Q ss_pred ecCCcEEEEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccC-CCCcEEEcCCCcEEEee
Q 003158 577 DEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDI-KASNILLDHKFTAKVAD 655 (843)
Q Consensus 577 ~~~~~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dl-kp~NILl~~~~~~kl~D 655 (843)
+..++||||++|++|.. +... . ...++.++++||.|||+++ |+|||| ||+|||++.++.+||+|
T Consensus 91 ---~~~~LVmE~~~G~~L~~-~~~~-----~---~~~~~~~i~~aL~~lH~~g---IiHrDL~KP~NILv~~~~~ikLiD 155 (365)
T PRK09188 91 ---GKDGLVRGWTEGVPLHL-ARPH-----G---DPAWFRSAHRALRDLHRAG---ITHNDLAKPQNWLMGPDGEAAVID 155 (365)
T ss_pred ---CCcEEEEEccCCCCHHH-hCcc-----c---hHHHHHHHHHHHHHHHHCC---CeeCCCCCcceEEEcCCCCEEEEE
Confidence 46799999999999973 2111 1 1457889999999999999 999999 99999999999999999
Q ss_pred ccccccCCCCCCCCccc-ceeeeeecccCCccCchhcccC
Q 003158 656 FGLSRLAPVPDIEGIVP-AHVSTVVKGTPGYLDPEYFLTH 694 (843)
Q Consensus 656 fGla~~~~~~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~ 694 (843)
||+|+........+... ....+...+++.|+|||.+...
T Consensus 156 FGlA~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~~ 195 (365)
T PRK09188 156 FQLASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTPR 195 (365)
T ss_pred CccceecccCcchhhhhhhhhhhhhhccCccCCcccCChh
Confidence 99998765432111111 1112456788899999999653
No 415
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=99.89 E-value=8.5e-26 Score=241.85 Aligned_cols=259 Identities=27% Similarity=0.431 Sum_probs=187.2
Q ss_pred Ccccc-ccCCccccCCCCCCEEEccCCcCCccCccccCCCCCCcEEEcccCcCCccCccccccCCCCCEEEccCCcccc-
Q 003158 2 WNKIS-GSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISG- 79 (843)
Q Consensus 2 ~N~i~-~~~p~~i~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~- 79 (843)
-|.++ +.+|.+...+++++.|.|...++. .+|+.++.|.+|++|.+++|++. .+-..++.|+.|+.+.+.+|+++.
T Consensus 16 gNDFsg~~FP~~v~qMt~~~WLkLnrt~L~-~vPeEL~~lqkLEHLs~~HN~L~-~vhGELs~Lp~LRsv~~R~N~LKns 93 (1255)
T KOG0444|consen 16 GNDFSGDRFPHDVEQMTQMTWLKLNRTKLE-QVPEELSRLQKLEHLSMAHNQLI-SVHGELSDLPRLRSVIVRDNNLKNS 93 (1255)
T ss_pred CCcCCCCcCchhHHHhhheeEEEechhhhh-hChHHHHHHhhhhhhhhhhhhhH-hhhhhhccchhhHHHhhhccccccC
Confidence 47777 589999999999999999999999 89999999999999999999998 566778999999999999999873
Q ss_pred CCCcccCCCCCCceeeccCCCCCCCCCcccCCCCCCcEEEcCCCCCCCCCCCc-cccCCCCCcEEEcCCCCCCCCCCCCC
Q 003158 80 QIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPA-SYSNMSKLLKLSLRNCSLQGPMPDLS 158 (843)
Q Consensus 80 ~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~-~~~~l~~L~~L~L~~N~l~~~~~~~~ 158 (843)
-+|..+.++..|+.|||++|+++ ..|..+..-.++-.|+||+|+|. .+|. .|.+++.|-.||||+|++..+||.+.
T Consensus 94 GiP~diF~l~dLt~lDLShNqL~-EvP~~LE~AKn~iVLNLS~N~Ie--tIPn~lfinLtDLLfLDLS~NrLe~LPPQ~R 170 (1255)
T KOG0444|consen 94 GIPTDIFRLKDLTILDLSHNQLR-EVPTNLEYAKNSIVLNLSYNNIE--TIPNSLFINLTDLLFLDLSNNRLEMLPPQIR 170 (1255)
T ss_pred CCCchhcccccceeeecchhhhh-hcchhhhhhcCcEEEEcccCccc--cCCchHHHhhHhHhhhccccchhhhcCHHHH
Confidence 36778889999999999999999 78888888899999999999997 4665 56789999999999999999999999
Q ss_pred CCCCCCEEEcccCcCCCCC-CCCCCCcCcCEEEccCCcCC-CCCCcccCCCCCCcEEeCcCccCCCCCCchhhccccCCC
Q 003158 159 RIPNLGYLDLSSNQLNGSI-PPGRLSLNITTIKLSNNKLT-GTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNA 236 (843)
Q Consensus 159 ~l~~L~~L~Ls~N~l~~~~-p~~~~~~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~l~~ 236 (843)
.+..|++|+|++|.+...- -......+|+.|++++.+=+ .-+|.++.++.+|..+|||.|.|. .+|+.+.++++|
T Consensus 171 RL~~LqtL~Ls~NPL~hfQLrQLPsmtsL~vLhms~TqRTl~N~Ptsld~l~NL~dvDlS~N~Lp-~vPecly~l~~L-- 247 (1255)
T KOG0444|consen 171 RLSMLQTLKLSNNPLNHFQLRQLPSMTSLSVLHMSNTQRTLDNIPTSLDDLHNLRDVDLSENNLP-IVPECLYKLRNL-- 247 (1255)
T ss_pred HHhhhhhhhcCCChhhHHHHhcCccchhhhhhhcccccchhhcCCCchhhhhhhhhccccccCCC-cchHHHhhhhhh--
Confidence 9999999999999875210 00011124444555444322 134445555555555555555554 455554443332
Q ss_pred CcceeEEcCCCCCCCCCCCC-cCCCCcEEEeccCcc
Q 003158 237 TETFILDFQNNNLTNISGSF-NIPPNVTVRLRGNPF 271 (843)
Q Consensus 237 ~~L~~L~l~~N~l~~~~~~~-~~~~l~~l~l~~Np~ 271 (843)
+.|+||+|+|+.+.... ...++.+|+++.|.+
T Consensus 248 ---rrLNLS~N~iteL~~~~~~W~~lEtLNlSrNQL 280 (1255)
T KOG0444|consen 248 ---RRLNLSGNKITELNMTEGEWENLETLNLSRNQL 280 (1255)
T ss_pred ---heeccCcCceeeeeccHHHHhhhhhhccccchh
Confidence 23444444444444333 233444444444443
No 416
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.89 E-value=5.5e-22 Score=215.51 Aligned_cols=265 Identities=21% Similarity=0.267 Sum_probs=200.2
Q ss_pred CCCCCCcccccCCeeEEEEEeCC--CcEEEEEEeccCChhhHHHHHHHHHHHHhccC----Ccccceeeee-ecCCcEEE
Q 003158 512 NFNSSTQIGQGGYGKVYKGILPD--GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHH----RNLVSLVGYC-DEEGEQML 584 (843)
Q Consensus 512 ~~~~~~~lg~G~~g~Vy~~~~~~--~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h----~nIv~l~~~~-~~~~~~~l 584 (843)
+|.+.+.||+|+||.||.+.... ...+|+|.-..........+..|..++..+.. +++..+++.. ..+...++
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~i 98 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNFI 98 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeEE
Confidence 79999999999999999999654 35788888765433332367788888888863 6889999998 57788999
Q ss_pred EEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCC-----CcEEEeecccc
Q 003158 585 VYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHK-----FTAKVADFGLS 659 (843)
Q Consensus 585 V~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~-----~~~kl~DfGla 659 (843)
||+.+ |.+|.++........++..+...|+.|++.+|+++|+.| ++||||||.|+++... ..+.|.|||+|
T Consensus 99 VM~l~-G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~G---~iHRDiKp~N~~~g~~~~~~~~~~~llDfGla 174 (322)
T KOG1164|consen 99 VMSLL-GPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSKG---FIHRDIKPENFVVGQSSRSEVRTLYLLDFGLA 174 (322)
T ss_pred EEecc-CccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhcC---cccCCcCHHHeeecCCCCcccceEEEEecCCC
Confidence 99999 889999886666677999999999999999999999999 9999999999999865 46999999999
Q ss_pred ccCC--CCCCCCccccee-eeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHH--HHHHHhh
Q 003158 660 RLAP--VPDIEGIVPAHV-STVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVR--EVNIAYQ 734 (843)
Q Consensus 660 ~~~~--~~~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~--~~~~~~~ 734 (843)
+... ........+... .....||..|.++....+.+.+.+.|+||++.++.|++.|..||........ .......
T Consensus 175 r~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~~~~~~~~~~ 254 (322)
T KOG1164|consen 175 RRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDLKSKFEKDPR 254 (322)
T ss_pred ccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccchHHHHHHHhh
Confidence 8433 222111111111 2446699999999999999999999999999999999999999965442211 1111100
Q ss_pred cccchhhccCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhh
Q 003158 735 SSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNM 788 (843)
Q Consensus 735 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~ 788 (843)
. ..... .....+..+.++...+-..+...+|....+...++.....
T Consensus 255 ~----~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~~l~~~~~~ 300 (322)
T KOG1164|consen 255 K----LLTDR----FGDLKPEEFAKILEYIDSLDYEDKPDYEKLAELLKDVFDS 300 (322)
T ss_pred h----hcccc----ccCCChHHHHHHHHHhhccCCcCCCCHHHHHHHHHHHHHh
Confidence 0 00000 1222345566666666668899999999999988877654
No 417
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.87 E-value=1.3e-23 Score=241.99 Aligned_cols=260 Identities=21% Similarity=0.268 Sum_probs=189.1
Q ss_pred CCCcccccCCeeEEEEEeC-CCcEEEEEEec----c-CCh-hhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEEe
Q 003158 515 SSTQIGQGGYGKVYKGILP-DGTVVAVKRAQ----E-GSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 587 (843)
Q Consensus 515 ~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~----~-~~~-~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e 587 (843)
..+.+|.|++|.|+..... ....++.|.+. . ... .....+..|+-+-..++|+|++..+..+.+.....-+||
T Consensus 322 ~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~mE 401 (601)
T KOG0590|consen 322 PGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQSME 401 (601)
T ss_pred ccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchhhhh
Confidence 4578999999988877643 34444444332 1 111 112236678888888999999988888877666666699
Q ss_pred cCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCC
Q 003158 588 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 667 (843)
Q Consensus 588 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~ 667 (843)
||++ +|..++... ..+...++..+..|+..|++|+|+.| |.|||+|++|++++.+|.+||+|||.+.....+..
T Consensus 402 ~~~~-Dlf~~~~~~--~~~~~~e~~c~fKqL~~Gv~y~h~~G---iahrdlK~enll~~~~g~lki~Dfg~~~vf~~~~e 475 (601)
T KOG0590|consen 402 YCPY-DLFSLVMSN--GKLTPLEADCFFKQLLRGVKYLHSMG---LAHRDLKLENLLVTENGILKIIDFGAASVFRYPWE 475 (601)
T ss_pred cccH-HHHHHHhcc--cccchhhhhHHHHHHHHHHHHHHhcC---ceeccCccccEEEecCCceEEeecCcceeeccCcc
Confidence 9998 999998664 24777788889999999999999999 99999999999999999999999999987654331
Q ss_pred CCcccceeeeeecccCCccCchhcccCCCCch-hhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhccCCC
Q 003158 668 EGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDK-SDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNM 746 (843)
Q Consensus 668 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~-sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 746 (843)
. .........|+..|+|||++.+.+|.+. .||||.|+++..|.+|+.||.......++.. ...
T Consensus 476 ~---~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~---------~~~---- 539 (601)
T KOG0590|consen 476 K---NIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFK---------TNN---- 539 (601)
T ss_pred h---hhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccchh---------hhc----
Confidence 1 1244567789999999999999999875 8999999999999999999965432111100 000
Q ss_pred CCCCHHHHHHHHHHHHHhcccCCCCC---CCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCCCCccCCCCCcc
Q 003158 747 GSYPSECVEKFIKLALKCCQDETDAR---PSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYV 823 (843)
Q Consensus 747 ~~~~~~~~~~l~~l~~~c~~~~p~~R---Ps~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~sa~e~L~Hp~f 823 (843)
...+| -....++..| |. .....|.+||++||++|+|++++++++||
T Consensus 540 ---------------------~~~~~~~~~~~~~~~~~l-------p~---~~~~~~~~~l~~~P~~R~ti~~i~~d~W~ 588 (601)
T KOG0590|consen 540 ---------------------YSDQRNIFEGPNRLLSLL-------PR---ETRIIIYRMLQLDPTKRITIEQILNDEWI 588 (601)
T ss_pred ---------------------cccccccccChHHHHHhc-------hh---hHHHHHHHHccCChhheecHHHHhhChHh
Confidence 00000 0111111111 11 22357889999999999999999999999
Q ss_pred cCCC
Q 003158 824 SSDV 827 (843)
Q Consensus 824 ~~~~ 827 (843)
++..
T Consensus 589 ~~i~ 592 (601)
T KOG0590|consen 589 RSIE 592 (601)
T ss_pred hhcc
Confidence 8754
No 418
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.86 E-value=7.2e-21 Score=191.30 Aligned_cols=275 Identities=19% Similarity=0.277 Sum_probs=207.9
Q ss_pred CCCCCCcccccCCeeEEEEE-eCCCcEEEEEEeccCChhhHHHHHHHHHHHHhc-cCCcccceeeeeecCCcEEEEEecC
Q 003158 512 NFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQMLVYEFM 589 (843)
Q Consensus 512 ~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~lV~e~~ 589 (843)
.|.+.++||+|.||..+.|+ +-+++.||||.-...+ ...++..|.+.++.+ ..+.|...+-+-.++.+-.||+|.+
T Consensus 29 hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS--~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVidLL 106 (449)
T KOG1165|consen 29 HYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKS--EAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVIDLL 106 (449)
T ss_pred cceeccccccCcceeeecccccccCceEEEEeccccC--CcchHHHHHHHHHHHcCCCCCCceeeeccccchhhhhhhhh
Confidence 68889999999999999999 5689999999755332 234677889888888 4789999888888888899999999
Q ss_pred CCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcC-----CCcEEEeeccccccCCC
Q 003158 590 SNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDH-----KFTAKVADFGLSRLAPV 664 (843)
Q Consensus 590 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~-----~~~~kl~DfGla~~~~~ 664 (843)
|.+|+|++. .....++..++.-+|.|++.-++|+|++. .|.|||||+|.||.. ...+.|+|||+|+.+..
T Consensus 107 -GPSLEDLFD-~CgR~FSvKTV~miA~Qmi~rie~vH~k~---LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~YrD 181 (449)
T KOG1165|consen 107 -GPSLEDLFD-LCGRRFSVKTVAMIAKQMITRIEYVHEKD---LIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYRD 181 (449)
T ss_pred -CcCHHHHHH-HhcCcccHHhHHHHHHHHHHHHHHHHhcc---eeecccCccceeecCCCCCCCceEEEEeccchhhhcC
Confidence 889999874 34556999999999999999999999999 999999999999964 34699999999998876
Q ss_pred CCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCcc--hHHHHHHHhhcccchhhc
Q 003158 665 PDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKN--IVREVNIAYQSSMMFSVI 742 (843)
Q Consensus 665 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~--~~~~~~~~~~~~~~~~~~ 742 (843)
++-....+-.......||.+||+--...+.+-+.+.|+=|+|-++...+-|..||..-.. ..+..+++-..... ..+
T Consensus 182 p~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA~tnK~kYeKIGe~Kr~-T~i 260 (449)
T KOG1165|consen 182 PKTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKADTNKEKYEKIGETKRS-TPI 260 (449)
T ss_pred ccccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccccCcchHHHHHHhcccccc-CCH
Confidence 664444455555677899999999999999999999999999999999999999975322 11111111110000 000
Q ss_pred cCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCc
Q 003158 743 DGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPE 798 (843)
Q Consensus 743 ~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~d 798 (843)
. ..-+.+++++..-+...-..+-++-|..+-+...+.++.+..-+.++...|
T Consensus 261 ~----~Lc~g~P~efa~Yl~yvR~L~F~E~PDYdylr~Lf~dvldr~g~t~Dg~yD 312 (449)
T KOG1165|consen 261 E----VLCEGFPEEFATYLRYVRRLDFFETPDYDYLRKLFDDVLDRLGETDDGEYD 312 (449)
T ss_pred H----HHHhcCHHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHHHhcCCccccccc
Confidence 0 011234455555555555667788899988887777777665554444434
No 419
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.86 E-value=1.2e-21 Score=188.45 Aligned_cols=271 Identities=20% Similarity=0.287 Sum_probs=204.3
Q ss_pred HHcCCCCCCcccccCCeeEEEEE-eCCCcEEEEEEeccCChhhHHHHHHHHHHHHhccC-CcccceeeeeecCCcEEEEE
Q 003158 509 ATNNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHH-RNLVSLVGYCDEEGEQMLVY 586 (843)
Q Consensus 509 ~~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h-~nIv~l~~~~~~~~~~~lV~ 586 (843)
..++|.++++||.|+||.+|.|. ..+|..||||.-..... ..++..|.++++.+++ ..|..+.-|..+...-.+||
T Consensus 13 v~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~--hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvlVM 90 (341)
T KOG1163|consen 13 VGGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAK--HPQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVLVM 90 (341)
T ss_pred eccceEEEEeecCCchhheeeeeeccCCceEEEEeecccCC--CcchhHHHHHHHHhccCCCCchhhhhccccccceeee
Confidence 35689999999999999999999 67899999998664332 2467789999999975 57777777888888999999
Q ss_pred ecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEc---CCCcEEEeeccccccCC
Q 003158 587 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLD---HKFTAKVADFGLSRLAP 663 (843)
Q Consensus 587 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~---~~~~~kl~DfGla~~~~ 663 (843)
|.+ |.+|.+++.- ....++..+++-++-|++.-++|+|.++ +|||||||+|.|.. ....+.++|||+|+.+-
T Consensus 91 dLL-GPsLEdLfnf-C~R~ftmkTvLMLaDQml~RiEyvH~r~---fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~ 165 (341)
T KOG1163|consen 91 DLL-GPSLEDLFNF-CSRRFTMKTVLMLADQMLSRIEYVHLRN---FIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYR 165 (341)
T ss_pred ecc-CccHHHHHHH-HhhhhhHHhHHHHHHHHHHHHHHHHhhc---cccccCCccceeeccccccceEEEEeccchhhhc
Confidence 999 8899998854 2335888899999999999999999999 99999999999985 34579999999998765
Q ss_pred CCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHH-HHHhhcccchhhc
Q 003158 664 VPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREV-NIAYQSSMMFSVI 742 (843)
Q Consensus 664 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~-~~~~~~~~~~~~~ 742 (843)
........+-.......||.+|.+--...+.+.+.+.|+=|+|.+|...--|..||.+-....+.. ...+.+..+...+
T Consensus 166 d~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~tk~QKyEkI~EkK~s~~i 245 (341)
T KOG1163|consen 166 DIRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKAATKKQKYEKISEKKMSTPI 245 (341)
T ss_pred cccccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccchhhHHHHHHHHHHhhcCCCH
Confidence 443333334444566789999999888888888889999999999999999999998643322111 1111111111001
Q ss_pred cCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCC
Q 003158 743 DGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMP 790 (843)
Q Consensus 743 ~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~ 790 (843)
. ..-..++.++.-.+..|-...-++-|...-+.+....++..+-
T Consensus 246 e----~LC~G~P~EF~myl~Y~R~L~F~E~Pdy~ylrqlFriLfr~ln 289 (341)
T KOG1163|consen 246 E----VLCKGFPAEFAMYLNYCRGLGFEEKPDYMYLRQLFRILFRTLN 289 (341)
T ss_pred H----HHhCCCcHHHHHHHHHHhhcCCCCCCcHHHHHHHHHHHHhhcc
Confidence 0 1122345667777888988888899998877777666655443
No 420
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.85 E-value=5.9e-20 Score=199.94 Aligned_cols=257 Identities=31% Similarity=0.489 Sum_probs=196.9
Q ss_pred CCCCCcccccCCeeEEEEEeCCCcEEEEEEeccCChh---hHHHHHHHHHHHHhccCC-cccceeeeeecCCcEEEEEec
Q 003158 513 FNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQ---GEKEFLTEIQFLSRLHHR-NLVSLVGYCDEEGEQMLVYEF 588 (843)
Q Consensus 513 ~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~-nIv~l~~~~~~~~~~~lV~e~ 588 (843)
|.....||.|+||.||++... ..+|+|.+...... ....+.+|+.+++.+.|+ +|+++.+++......++++++
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~--~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 79 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR--KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEY 79 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec--cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEec
Confidence 566788999999999999976 78999988754332 367899999999999988 799999999777778999999
Q ss_pred CCCCCHHHHHhhcCC-CCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCC-cEEEeeccccccCCCCC
Q 003158 589 MSNGTLRDQLSAKSK-EPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKF-TAKVADFGLSRLAPVPD 666 (843)
Q Consensus 589 ~~~gsL~~~l~~~~~-~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~-~~kl~DfGla~~~~~~~ 666 (843)
+.++++.+++..... ..+.......+..|++.++.|+|+.+ ++|||+||+||+++..+ .++++|||.++......
T Consensus 80 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~~---~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~ 156 (384)
T COG0515 80 VDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKG---IIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPG 156 (384)
T ss_pred CCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHeeecCCCCeEEEeccCcceecCCCC
Confidence 999999977755332 25888899999999999999999999 99999999999999988 79999999998554322
Q ss_pred CCCcccceeeeeecccCCccCchhccc---CCCCchhhhHHHHHHHHHHHhCCCCCCCCcc---hHHHHHHHhhcccchh
Q 003158 667 IEGIVPAHVSTVVKGTPGYLDPEYFLT---HKLTDKSDVYSLGVVFLELLTGMQPISHGKN---IVREVNIAYQSSMMFS 740 (843)
Q Consensus 667 ~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~sDvwS~G~~l~elltg~~pf~~~~~---~~~~~~~~~~~~~~~~ 740 (843)
..... ........|+..|+|||.+.+ .......|+||+|++++++++|..||..... ........... .
T Consensus 157 ~~~~~-~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~-~--- 231 (384)
T COG0515 157 STSSI-PALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILEL-P--- 231 (384)
T ss_pred ccccc-cccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHHhc-C---
Confidence 11000 012356679999999999988 5788899999999999999999999765543 11111111110 0
Q ss_pred hccC-CCCCCC----HHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 003158 741 VIDG-NMGSYP----SECVEKFIKLALKCCQDETDARPSMSEVMRE 781 (843)
Q Consensus 741 ~~~~-~~~~~~----~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~ 781 (843)
.+ ...... ......+.+++..|+..+|..|.+..+....
T Consensus 232 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 275 (384)
T COG0515 232 --TPSLASPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSH 275 (384)
T ss_pred --CcccccccCccccchhhHHHHHHHHHHHhcCchhcCCHHHHhhc
Confidence 00 001111 1223567888899999999999988876654
No 421
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.84 E-value=1.3e-20 Score=221.01 Aligned_cols=238 Identities=26% Similarity=0.458 Sum_probs=191.3
Q ss_pred CccccccCCccccCCCCCCEEEccCCcCCccCccccCCCCCCcEEEcccCcCCccCccccccCCCCCEEEccCCccccCC
Q 003158 2 WNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQI 81 (843)
Q Consensus 2 ~N~i~~~~p~~i~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 81 (843)
+++++ .+|..+. ++|+.|+|++|+|+ .+|..+. ++|++|+|++|+|+ .+|..+. .+|+.|+|++|++. .+
T Consensus 187 ~~~Lt-sLP~~Ip--~~L~~L~Ls~N~Lt-sLP~~l~--~nL~~L~Ls~N~Lt-sLP~~l~--~~L~~L~Ls~N~L~-~L 256 (754)
T PRK15370 187 ILGLT-TIPACIP--EQITTLILDNNELK-SLPENLQ--GNIKTLYANSNQLT-SIPATLP--DTIQEMELSINRIT-EL 256 (754)
T ss_pred CCCcC-cCCcccc--cCCcEEEecCCCCC-cCChhhc--cCCCEEECCCCccc-cCChhhh--ccccEEECcCCccC-cC
Confidence 35666 5776664 58999999999999 5676554 58999999999999 5676553 47999999999998 66
Q ss_pred CcccCCCCCCceeeccCCCCCCCCCcccCCCCCCcEEEcCCCCCCCCCCCccccCCCCCcEEEcCCCCCCCCCCCCCCCC
Q 003158 82 PPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMPDLSRIP 161 (843)
Q Consensus 82 ~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~ 161 (843)
|..+. .+|+.|+|++|+|+ .+|..+. ++|+.|+|++|+|+. +|..+. ++|+.|+|++|+++.++..+. +
T Consensus 257 P~~l~--s~L~~L~Ls~N~L~-~LP~~l~--~sL~~L~Ls~N~Lt~--LP~~lp--~sL~~L~Ls~N~Lt~LP~~l~--~ 325 (754)
T PRK15370 257 PERLP--SALQSLDLFHNKIS-CLPENLP--EELRYLSVYDNSIRT--LPAHLP--SGITHLNVQSNSLTALPETLP--P 325 (754)
T ss_pred ChhHh--CCCCEEECcCCccC-ccccccC--CCCcEEECCCCcccc--Ccccch--hhHHHHHhcCCccccCCcccc--c
Confidence 76664 58999999999999 5676664 589999999999974 565543 479999999999998766443 6
Q ss_pred CCCEEEcccCcCCCCCCCCCCCcCcCEEEccCCcCCCCCCcccCCCCCCcEEeCcCccCCCCCCchhhccccCCCCccee
Q 003158 162 NLGYLDLSSNQLNGSIPPGRLSLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFI 241 (843)
Q Consensus 162 ~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~l~~~~L~~ 241 (843)
+|+.|++++|.++ .+|.... .+|+.|+|++|+|+ .+|..+. ++|+.|+|++|+|+ .+|..+.. .|+.
T Consensus 326 sL~~L~Ls~N~Lt-~LP~~l~-~sL~~L~Ls~N~L~-~LP~~lp--~~L~~LdLs~N~Lt-~LP~~l~~-------sL~~ 392 (754)
T PRK15370 326 GLKTLEAGENALT-SLPASLP-PELQVLDVSKNQIT-VLPETLP--PTITTLDVSRNALT-NLPENLPA-------ALQI 392 (754)
T ss_pred cceeccccCCccc-cCChhhc-CcccEEECCCCCCC-cCChhhc--CCcCEEECCCCcCC-CCCHhHHH-------HHHH
Confidence 8999999999998 5776543 58999999999998 5676553 68999999999999 57776532 4778
Q ss_pred EEcCCCCCCCCCCCC-----cCCCCcEEEeccCcccc
Q 003158 242 LDFQNNNLTNISGSF-----NIPPNVTVRLRGNPFCL 273 (843)
Q Consensus 242 L~l~~N~l~~~~~~~-----~~~~l~~l~l~~Np~~c 273 (843)
|++++|+|+.+|... ..+.+..|++.+||+..
T Consensus 393 LdLs~N~L~~LP~sl~~~~~~~~~l~~L~L~~Npls~ 429 (754)
T PRK15370 393 MQASRNNLVRLPESLPHFRGEGPQPTRIIVEYNPFSE 429 (754)
T ss_pred HhhccCCcccCchhHHHHhhcCCCccEEEeeCCCccH
Confidence 999999999998754 35788999999999873
No 422
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.84 E-value=3.5e-20 Score=215.91 Aligned_cols=232 Identities=27% Similarity=0.380 Sum_probs=149.7
Q ss_pred CccccccCCccccCCCCCCEEEccCCcCCccCccccCCCCCCcEEEcccCcCCccCccccccCCCCCEEEccCCccccCC
Q 003158 2 WNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQI 81 (843)
Q Consensus 2 ~N~i~~~~p~~i~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 81 (843)
.|+|+ .+|..|. .+|+.|+|.+|+|+ .+|. .+++|++|+|++|+|+ .+|.. .++|+.|+|++|.|+ .+
T Consensus 210 ~~~Lt-sLP~~l~--~~L~~L~L~~N~Lt-~LP~---lp~~Lk~LdLs~N~Lt-sLP~l---p~sL~~L~Ls~N~L~-~L 277 (788)
T PRK15387 210 ESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPA---LPPELRTLEVSGNQLT-SLPVL---PPGLLELSIFSNPLT-HL 277 (788)
T ss_pred CCCCC-cCCcchh--cCCCEEEccCCcCC-CCCC---CCCCCcEEEecCCccC-cccCc---ccccceeeccCCchh-hh
Confidence 46777 6787775 47888999999888 4564 3578888999998888 44532 356677777777666 33
Q ss_pred CcccCCCCCCceeeccCCCCCCCCCcccCCCCCCcEEEcCCCCCCCCCCCcccc-----------------CCCCCcEEE
Q 003158 82 PPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYS-----------------NMSKLLKLS 144 (843)
Q Consensus 82 ~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~-----------------~l~~L~~L~ 144 (843)
|..+ .+|+.|+|++|+|+ .+|.. +++|+.|+|++|++++ +|.... ...+|+.|+
T Consensus 278 p~lp---~~L~~L~Ls~N~Lt-~LP~~---p~~L~~LdLS~N~L~~--Lp~lp~~L~~L~Ls~N~L~~LP~lp~~Lq~Ld 348 (788)
T PRK15387 278 PALP---SGLCKLWIFGNQLT-SLPVL---PPGLQELSVSDNQLAS--LPALPSELCKLWAYNNQLTSLPTLPSGLQELS 348 (788)
T ss_pred hhch---hhcCEEECcCCccc-ccccc---ccccceeECCCCcccc--CCCCcccccccccccCccccccccccccceEe
Confidence 3322 34555555555555 23321 2455555555555543 222110 113566777
Q ss_pred cCCCCCCCCCCCCCCCCCCCEEEcccCcCCCCCCCCCCCcCcCEEEccCCcCCCCCCcccCCCCCCcEEeCcCccCCCCC
Q 003158 145 LRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLSLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSI 224 (843)
Q Consensus 145 L~~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 224 (843)
|++|+|+++++. ..+|+.|++++|+|+ .+|... .+|+.|+|++|+|++ +|.. .++|+.|++++|+|+ .+
T Consensus 349 LS~N~Ls~LP~l---p~~L~~L~Ls~N~L~-~LP~l~--~~L~~LdLs~N~Lt~-LP~l---~s~L~~LdLS~N~Ls-sI 417 (788)
T PRK15387 349 VSDNQLASLPTL---PSELYKLWAYNNRLT-SLPALP--SGLKELIVSGNRLTS-LPVL---PSELKELMVSGNRLT-SL 417 (788)
T ss_pred cCCCccCCCCCC---Ccccceehhhccccc-cCcccc--cccceEEecCCcccC-CCCc---ccCCCEEEccCCcCC-CC
Confidence 777777665542 235666677777776 455432 367888888888874 4433 356888888888887 35
Q ss_pred CchhhccccCCCCcceeEEcCCCCCCCCCCCC-cCCCCcEEEeccCcccc
Q 003158 225 PSSIWQSRTLNATETFILDFQNNNLTNISGSF-NIPPNVTVRLRGNPFCL 273 (843)
Q Consensus 225 p~~~~~l~~l~~~~L~~L~l~~N~l~~~~~~~-~~~~l~~l~l~~Np~~c 273 (843)
|... .+|+.|+|++|+|+.+|..+ .++.+..|+|++|||..
T Consensus 418 P~l~--------~~L~~L~Ls~NqLt~LP~sl~~L~~L~~LdLs~N~Ls~ 459 (788)
T PRK15387 418 PMLP--------SGLLSLSVYRNQLTRLPESLIHLSSETTVNLEGNPLSE 459 (788)
T ss_pred Ccch--------hhhhhhhhccCcccccChHHhhccCCCeEECCCCCCCc
Confidence 6432 24567899999999988766 78899999999999874
No 423
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.83 E-value=2.7e-20 Score=185.32 Aligned_cols=140 Identities=19% Similarity=0.152 Sum_probs=109.7
Q ss_pred CCcccccCCeeEEEEEeCCCcEEEEEEeccCChh--h------------------------HHHHHHHHHHHHhccCCcc
Q 003158 516 STQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQ--G------------------------EKEFLTEIQFLSRLHHRNL 569 (843)
Q Consensus 516 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--~------------------------~~~~~~E~~~l~~l~h~nI 569 (843)
...||+|+||.||+|...+|+.||||+++..... . ......|++.+.++.++++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v 81 (190)
T cd05147 2 NGCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGI 81 (190)
T ss_pred CCccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 4689999999999999888999999998754211 0 1123459999999988877
Q ss_pred cceeeeeecCCcEEEEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHH-hcCCCCCEEeccCCCCcEEEcCC
Q 003158 570 VSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYL-HTEADPPVFHRDIKASNILLDHK 648 (843)
Q Consensus 570 v~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yL-H~~~~~~iiH~Dlkp~NILl~~~ 648 (843)
.....+.. ...++||||++++++...... ..+++......++.|++.+|.|+ |+.+ |+||||||+||+++ +
T Consensus 82 ~~p~~~~~--~~~~iVmE~i~g~~l~~~~~~--~~~~~~~~~~~i~~qi~~~L~~l~H~~g---iiHrDlkP~NIli~-~ 153 (190)
T cd05147 82 PCPEPILL--KSHVLVMEFIGDDGWAAPRLK--DAPLSESKARELYLQVIQIMRILYQDCR---LVHADLSEYNLLYH-D 153 (190)
T ss_pred CCCcEEEe--cCCEEEEEEeCCCCCcchhhh--cCCCCHHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEEE-C
Confidence 54433322 234899999998877655322 23578889999999999999999 6888 99999999999998 4
Q ss_pred CcEEEeeccccccCC
Q 003158 649 FTAKVADFGLSRLAP 663 (843)
Q Consensus 649 ~~~kl~DfGla~~~~ 663 (843)
+.++|+|||+|....
T Consensus 154 ~~v~LiDFG~a~~~~ 168 (190)
T cd05147 154 GKLYIIDVSQSVEHD 168 (190)
T ss_pred CcEEEEEccccccCC
Confidence 789999999997543
No 424
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.83 E-value=1.4e-20 Score=188.95 Aligned_cols=172 Identities=15% Similarity=0.107 Sum_probs=134.7
Q ss_pred HHHcCCCCCCcccccCCeeEEEEEeCCCcEEEEEEeccCChhhHHH---------HHHHHHHHHhccCCcccceeeeeec
Q 003158 508 LATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKE---------FLTEIQFLSRLHHRNLVSLVGYCDE 578 (843)
Q Consensus 508 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~---------~~~E~~~l~~l~h~nIv~l~~~~~~ 578 (843)
...++|...+.+|.|+||.||.+.. ++..+|+|.+.......++. +.+|++.+.++.|++|..+.+++..
T Consensus 28 ~l~~~y~~~~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~ 106 (232)
T PRK10359 28 FLSYNIKTIKVFRNIDDTKVSLIDT-DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLL 106 (232)
T ss_pred HhhCceEEEEEecCCCceEEEEEec-CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeee
Confidence 3478999999999999999999766 57789999997543333222 6899999999999999999988653
Q ss_pred C--------CcEEEEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCc
Q 003158 579 E--------GEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFT 650 (843)
Q Consensus 579 ~--------~~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~ 650 (843)
. +..+|||||++|.+|.++.. ++. ....+++.++..+|+.+ ++|||+||+|+++++++
T Consensus 107 ~~~~~~~~~~~~~lvmEyi~G~tL~~~~~------~~~----~~~~~i~~~l~~lH~~g---i~H~Dikp~Nili~~~g- 172 (232)
T PRK10359 107 AERKTLRYAHTYIMLIEYIEGVELNDMPE------ISE----DVKAKIKASIESLHQHG---MVSGDPHKGNFIVSKNG- 172 (232)
T ss_pred cccccccccCCeEEEEEEECCccHHHhhh------ccH----HHHHHHHHHHHHHHHcC---CccCCCChHHEEEeCCC-
Confidence 3 35899999999999988741 222 24568999999999999 99999999999999988
Q ss_pred EEEeeccccccCCCCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHH
Q 003158 651 AKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELL 713 (843)
Q Consensus 651 ~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~ell 713 (843)
++|+|||.......... ...+.....+..++|+|+||+++.-..
T Consensus 173 i~liDfg~~~~~~e~~a-------------------~d~~vler~y~~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 173 LRIIDLSGKRCTAQRKA-------------------KDRIDLERHYGIKNEIKDLGYYLLIYK 216 (232)
T ss_pred EEEEECCCcccccchhh-------------------HHHHHHHhHhcccccccceeEeehHHH
Confidence 99999998875432110 011344555677899999999987654
No 425
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.82 E-value=1.6e-20 Score=214.48 Aligned_cols=251 Identities=20% Similarity=0.242 Sum_probs=183.0
Q ss_pred CCCCCCcccccCCeeEEEEEeCCCcEEEEEEeccCC-hhhHHHH---HHHHHHHHhccCCcccceeeeeecCCcEEEEEe
Q 003158 512 NFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGS-LQGEKEF---LTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 587 (843)
Q Consensus 512 ~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~---~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e 587 (843)
+|...+.||.+.|=+|.+|++++|. |+||++-+.. ......| ..|++ ...++|||.+++.-+...+...|||=+
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~eG~-vVvKVFvk~~p~~sL~~~~qrL~~ik-~~l~~~pn~lPfqk~~~t~kAAylvRq 101 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDREGL-VVVKVFVKQDPTISLRPFKQRLEEIK-FALMKAPNCLPFQKVLVTDKAAYLVRQ 101 (1431)
T ss_pred ceeeecccCchhhhhhhhccCCCce-EEEEEEeccCCCCCchHHHHHHHHHH-HHhhcCCcccchHHHHHhhHHHHHHHH
Confidence 5666789999999999999998887 8899886543 2223333 44555 556689999999988888888899999
Q ss_pred cCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCC
Q 003158 588 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 667 (843)
Q Consensus 588 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~ 667 (843)
|+.+ +|+|.+..+. -+...+.++|+.|++.||.-+|+.+ |+|||||.+|||+++-.-+.|+||..-+..-.++.
T Consensus 102 yvkh-nLyDRlSTRP--FL~~iEKkWiaFQLL~al~qcH~~g---VcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPeD 175 (1431)
T KOG1240|consen 102 YVKH-NLYDRLSTRP--FLVLIEKKWIAFQLLKALSQCHKLG---VCHGDIKSENILITSWNWLYLTDFASFKPTYLPED 175 (1431)
T ss_pred HHhh-hhhhhhccch--HHHHHHHHHHHHHHHHHHHHHHHcC---ccccccccceEEEeeechhhhhcccccCCccCCCC
Confidence 9954 9999986543 3788889999999999999999999 99999999999999999999999987654433322
Q ss_pred CCcccceeeeeecccCCccCchhcccC----------C-CCchhhhHHHHHHHHHHHh-CCCCCCCCcchHHHHHHHhh-
Q 003158 668 EGIVPAHVSTVVKGTPGYLDPEYFLTH----------K-LTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQ- 734 (843)
Q Consensus 668 ~~~~~~~~~~~~~gt~~y~aPE~~~~~----------~-~~~~sDvwS~G~~l~ellt-g~~pf~~~~~~~~~~~~~~~- 734 (843)
+...-............|+|||.+... . .+++.||||+||++.||++ |++||.-. +.......
T Consensus 176 NPadf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LS----QL~aYr~~~ 251 (1431)
T KOG1240|consen 176 NPADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLS----QLLAYRSGN 251 (1431)
T ss_pred CcccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHH----HHHhHhccC
Confidence 211112233344455689999998542 1 5678999999999999999 77777521 11111000
Q ss_pred cccchhhccCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 003158 735 SSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRE 781 (843)
Q Consensus 735 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~ 781 (843)
......++. ..+ ...+..++..|++.+|.+|-++++.++.
T Consensus 252 ~~~~e~~Le----~Ie---d~~~Rnlil~Mi~rdPs~RlSAedyL~~ 291 (1431)
T KOG1240|consen 252 ADDPEQLLE----KIE---DVSLRNLILSMIQRDPSKRLSAEDYLQK 291 (1431)
T ss_pred ccCHHHHHH----hCc---CccHHHHHHHHHccCchhccCHHHHHHh
Confidence 000000000 001 1257889999999999999999999876
No 426
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.82 E-value=2.2e-21 Score=212.10 Aligned_cols=222 Identities=27% Similarity=0.295 Sum_probs=171.8
Q ss_pred cccccCCeeEEEEE----eCCCcEEEEEEeccCChhh--HHHHHHHHHHHHhcc-CCcccceeeeeecCCcEEEEEecCC
Q 003158 518 QIGQGGYGKVYKGI----LPDGTVVAVKRAQEGSLQG--EKEFLTEIQFLSRLH-HRNLVSLVGYCDEEGEQMLVYEFMS 590 (843)
Q Consensus 518 ~lg~G~~g~Vy~~~----~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~-h~nIv~l~~~~~~~~~~~lV~e~~~ 590 (843)
.+|+|.||.|+.+. .+.|..+|.|+.++..... ......|-.++...+ ||.++++.-.+..+...++++++..
T Consensus 1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~r 80 (612)
T KOG0603|consen 1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLR 80 (612)
T ss_pred CCCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhcc
Confidence 37999999998765 2347889999887643322 124456788888887 9999999999999999999999999
Q ss_pred CCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCCCCc
Q 003158 591 NGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGI 670 (843)
Q Consensus 591 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~ 670 (843)
+|+|...+.... .+.+.....+...++-|++++|+.+ |+|||+|++||+++.+|.+++.|||+++..-..+
T Consensus 81 gg~lft~l~~~~--~f~~~~~~~~~aelaLald~lh~l~---iiyrd~k~enilld~~Ghi~~tdfglske~v~~~---- 151 (612)
T KOG0603|consen 81 GGDLFTRLSKEV--MFDELDVAFYLAELALALDHLHKLG---IAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEK---- 151 (612)
T ss_pred cchhhhccccCC--chHHHHHHHHHHHHHHHHhhcchhH---HHHhcccccceeecccCccccCCchhhhHhHhhh----
Confidence 999988875433 3666777778888899999999999 9999999999999999999999999998654322
Q ss_pred ccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhccCCCCCCC
Q 003158 671 VPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYP 750 (843)
Q Consensus 671 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 750 (843)
..+||..|||||++. .+..++|.||||++++||+||..||.. +.. ..+-......|
T Consensus 152 -------~~cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~-----~~~----------~~Il~~~~~~p 207 (612)
T KOG0603|consen 152 -------IACGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGG-----DTM----------KRILKAELEMP 207 (612)
T ss_pred -------hcccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCch-----HHH----------HHHhhhccCCc
Confidence 117899999999998 567889999999999999999999975 111 11111122345
Q ss_pred HHHHHHHHHHHHHhcccCCCCC
Q 003158 751 SECVEKFIKLALKCCQDETDAR 772 (843)
Q Consensus 751 ~~~~~~l~~l~~~c~~~~p~~R 772 (843)
.+.+.....++......+|..|
T Consensus 208 ~~l~~~a~~~~~~l~~r~p~nr 229 (612)
T KOG0603|consen 208 RELSAEARSLFRQLFKRNPENR 229 (612)
T ss_pred hhhhHHHHHHHHHHHhhCHHHH
Confidence 5666666666666655555555
No 427
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.81 E-value=2.4e-19 Score=175.90 Aligned_cols=191 Identities=14% Similarity=0.074 Sum_probs=141.3
Q ss_pred CCCCcccccCCeeEEEEEeCCCcEEEEEEeccCChhh----HHHHHHHHHHHHhcc-CCcccceeeeeecCCcEEEEEec
Q 003158 514 NSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQG----EKEFLTEIQFLSRLH-HRNLVSLVGYCDEEGEQMLVYEF 588 (843)
Q Consensus 514 ~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~----~~~~~~E~~~l~~l~-h~nIv~l~~~~~~~~~~~lV~e~ 588 (843)
.+...|++|+||+||.+.. .+..++.+.+.....-. ...+.+|+++|++++ |+++.+++++ +..+++|||
T Consensus 5 ~~~~~l~~~~f~~v~~~~~-~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvmey 79 (218)
T PRK12274 5 AVNEPLKSDTFGRILLVRG-GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRSY 79 (218)
T ss_pred ccceeecCCCcceEEEeec-CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEee
Confidence 3467899999999997765 67888888777543311 235789999999995 5889999886 457999999
Q ss_pred CCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccC-CCCcEEEcCCCcEEEeeccccccCCCCCC
Q 003158 589 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDI-KASNILLDHKFTAKVADFGLSRLAPVPDI 667 (843)
Q Consensus 589 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dl-kp~NILl~~~~~~kl~DfGla~~~~~~~~ 667 (843)
++|.+|...+.. ....+..|++++|.++|+.| |+|||| ||+|||+++++.++|+|||+|........
T Consensus 80 I~G~~L~~~~~~---------~~~~~~~qi~~~L~~lH~~G---IvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~~ 147 (218)
T PRK12274 80 LAGAAMYQRPPR---------GDLAYFRAARRLLQQLHRCG---VAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRAR 147 (218)
T ss_pred ecCccHHhhhhh---------hhHHHHHHHHHHHHHHHHCc---CccCCCCCcceEEEcCCCCEEEEECCCceecCCcch
Confidence 999998765421 11346789999999999999 999999 79999999999999999999985442210
Q ss_pred C-Cccc----ce-eeeeecccCCccCchhcccC-CCC-chhhhHHHHHHHHHHHhCCCCCCC
Q 003158 668 E-GIVP----AH-VSTVVKGTPGYLDPEYFLTH-KLT-DKSDVYSLGVVFLELLTGMQPISH 721 (843)
Q Consensus 668 ~-~~~~----~~-~~~~~~gt~~y~aPE~~~~~-~~~-~~sDvwS~G~~l~elltg~~pf~~ 721 (843)
- .... .+ .......++.|++|+...-. ..+ .+.+.++-|+.+|.++|+..++..
T Consensus 148 ~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~ 209 (218)
T PRK12274 148 WMRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWE 209 (218)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCccc
Confidence 0 0000 00 01123467888888876532 333 567899999999999999887654
No 428
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.81 E-value=4e-19 Score=177.62 Aligned_cols=139 Identities=20% Similarity=0.155 Sum_probs=111.1
Q ss_pred CCcccccCCeeEEEEEeCCCcEEEEEEeccCChh---------------------h-----HHHHHHHHHHHHhccCCcc
Q 003158 516 STQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQ---------------------G-----EKEFLTEIQFLSRLHHRNL 569 (843)
Q Consensus 516 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~---------------------~-----~~~~~~E~~~l~~l~h~nI 569 (843)
...||+|+||.||+|...+|+.||||++...... . ...+..|.+.+.++.|+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i 81 (190)
T cd05145 2 NGCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGV 81 (190)
T ss_pred CceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 4689999999999999778999999998754211 0 1224678999999999988
Q ss_pred cceeeeeecCCcEEEEEecCCCCCHHHH-HhhcCCCCcchhHHHHHHHHHHHHHHHHhc-CCCCCEEeccCCCCcEEEcC
Q 003158 570 VSLVGYCDEEGEQMLVYEFMSNGTLRDQ-LSAKSKEPLGFAMRLSIALGSSRGILYLHT-EADPPVFHRDIKASNILLDH 647 (843)
Q Consensus 570 v~l~~~~~~~~~~~lV~e~~~~gsL~~~-l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~-~~~~~iiH~Dlkp~NILl~~ 647 (843)
.....+... ..++||||++++++... +.. ..++......++.|++.++.++|+ .+ |+||||||+||+++
T Consensus 82 ~~p~~~~~~--~~~lVmE~~~g~~~~~~~l~~---~~~~~~~~~~i~~~l~~~l~~lH~~~g---ivHrDlkP~NIll~- 152 (190)
T cd05145 82 PVPEPILLK--KNVLVMEFIGDDGSPAPRLKD---VPLEEEEAEELYEQVVEQMRRLYQEAG---LVHGDLSEYNILYH- 152 (190)
T ss_pred CCceEEEec--CCEEEEEEecCCCchhhhhhh---ccCCHHHHHHHHHHHHHHHHHHHHhCC---EecCCCChhhEEEE-
Confidence 655444333 34899999988865443 322 346778889999999999999999 88 99999999999999
Q ss_pred CCcEEEeeccccccCC
Q 003158 648 KFTAKVADFGLSRLAP 663 (843)
Q Consensus 648 ~~~~kl~DfGla~~~~ 663 (843)
++.++|+|||+|....
T Consensus 153 ~~~~~liDFG~a~~~~ 168 (190)
T cd05145 153 DGKPYIIDVSQAVELD 168 (190)
T ss_pred CCCEEEEEcccceecC
Confidence 8899999999998654
No 429
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.80 E-value=8.4e-22 Score=179.97 Aligned_cols=167 Identities=28% Similarity=0.507 Sum_probs=146.5
Q ss_pred cCCCCCCcEEEcccCcCCccCccccccCCCCCEEEccCCccccCCCcccCCCCCCceeeccCCCCCCCCCcccCCCCCCc
Q 003158 37 LGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLL 116 (843)
Q Consensus 37 ~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 116 (843)
+-++++.+.|.||+|+++ .+|..++++.+|+.|++.+|+|+ .+|..++.++.|+.|+++-|++. .+|..|+.+|.|+
T Consensus 29 Lf~~s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~le 105 (264)
T KOG0617|consen 29 LFNMSNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPALE 105 (264)
T ss_pred ccchhhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCchhh
Confidence 446778888999999998 67778899999999999999998 78888999999999999999998 8899999999999
Q ss_pred EEEcCCCCCCCCCCCccccCCCCCcEEEcCCCCCCCCCCCCCCCCCCCEEEcccCcCCCCCCCCCCCcCcCEEEccCCcC
Q 003158 117 ILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLSLNITTIKLSNNKL 196 (843)
Q Consensus 117 ~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~Ls~N~l 196 (843)
.|||+.|+++.-.+|..|..++.|+.|+|++|.+.-+|++++.+++|+.|.+.+|.+-
T Consensus 106 vldltynnl~e~~lpgnff~m~tlralyl~dndfe~lp~dvg~lt~lqil~lrdndll---------------------- 163 (264)
T KOG0617|consen 106 VLDLTYNNLNENSLPGNFFYMTTLRALYLGDNDFEILPPDVGKLTNLQILSLRDNDLL---------------------- 163 (264)
T ss_pred hhhccccccccccCCcchhHHHHHHHHHhcCCCcccCChhhhhhcceeEEeeccCchh----------------------
Confidence 9999999998777899999999999999999999999999999999999999999886
Q ss_pred CCCCCcccCCCCCCcEEeCcCccCCCCCCchhhcc
Q 003158 197 TGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQS 231 (843)
Q Consensus 197 ~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l 231 (843)
..|..++.+++|++|++.+|+++ .+|..++.+
T Consensus 164 --~lpkeig~lt~lrelhiqgnrl~-vlppel~~l 195 (264)
T KOG0617|consen 164 --SLPKEIGDLTRLRELHIQGNRLT-VLPPELANL 195 (264)
T ss_pred --hCcHHHHHHHHHHHHhcccceee-ecChhhhhh
Confidence 56778888888999999999888 677666543
No 430
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.79 E-value=2.8e-19 Score=196.45 Aligned_cols=217 Identities=26% Similarity=0.409 Sum_probs=163.0
Q ss_pred HHhccCCcccceeeeeecCCcEEEEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCC
Q 003158 561 LSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKA 640 (843)
Q Consensus 561 l~~l~h~nIv~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp 640 (843)
|+.+.|.|+.+|+|.+.++...+.|.+||..|+|.|.+.. ....+++.....++++|+.||+|+|... -..|+.+++
T Consensus 1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~-~~~~~d~~F~~s~~rdi~~Gl~ylh~s~--i~~hg~l~s 77 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSN-EDIKLDYFFILSFIRDISKGLAYLHNSP--IGYHGALKS 77 (484)
T ss_pred CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhc-cccCccHHHHHHHHHHHHHHHHHHhcCc--ceeeeeecc
Confidence 3568999999999999999999999999999999999976 3456899999999999999999999865 239999999
Q ss_pred CcEEEcCCCcEEEeeccccccCCCCCCCCcccceeeeeecccCCccCchhcccCC-------CCchhhhHHHHHHHHHHH
Q 003158 641 SNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHK-------LTDKSDVYSLGVVFLELL 713 (843)
Q Consensus 641 ~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-------~~~~sDvwS~G~~l~ell 713 (843)
+|+++|....+|++|||+......... ........-..-|.|||.+.... .+.+.||||||++++|++
T Consensus 78 ~nClvd~~w~lklt~~Gl~~~~~~~~~-----~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~ 152 (484)
T KOG1023|consen 78 SNCLVDSRWVLKLTDFGLNSLLEETAE-----PEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEIL 152 (484)
T ss_pred ccceeeeeEEEEechhhhccccccccc-----ccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHH
Confidence 999999999999999999887642100 01111222445799999998631 466799999999999999
Q ss_pred hCCCCCCCCcchHHHHHHHhhcccchhhccCCCCCCC-H-HHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhh
Q 003158 714 TGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYP-S-ECVEKFIKLALKCCQDETDARPSMSEVMRELESIWN 787 (843)
Q Consensus 714 tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~ 787 (843)
+.+.||.......+..+....... .-....++... . +..+.+..++..||..+|.+||++.++...++.+..
T Consensus 153 ~r~~~~~~~~~~~~~~eii~~~~~--~~~~~~rP~i~~~~e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~~~~~ 226 (484)
T KOG1023|consen 153 FRSGPFDLRNLVEDPDEIILRVKK--GGSNPFRPSIELLNELPPELLLLVARCWEEIPEKRPSIEQIRSKLLTINK 226 (484)
T ss_pred hccCccccccccCChHHHHHHHHh--cCCCCcCcchhhhhhcchHHHHHHHHhcccChhhCccHHHHHhhhhhhcc
Confidence 999999864332221111111000 00011112111 1 455578999999999999999999999888877654
No 431
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.77 E-value=3.3e-18 Score=177.08 Aligned_cols=229 Identities=22% Similarity=0.257 Sum_probs=147.2
Q ss_pred CCCcccccCCeeEEEEEeC-CCcEEEEEEeccCCh---hhHHHHHHHHHHHHhcc----------CCcccceeeeee---
Q 003158 515 SSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLH----------HRNLVSLVGYCD--- 577 (843)
Q Consensus 515 ~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~----------h~nIv~l~~~~~--- 577 (843)
..+.||.|+++.||.+.+. +++.+|||++..... ...+++.+|.-....+. |-.++-.++...
T Consensus 16 ~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~i~~ 95 (288)
T PF14531_consen 16 RGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLRIPG 95 (288)
T ss_dssp EEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEEETT
T ss_pred EccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEEEcC
Confidence 4578999999999999976 589999998764332 22356666665554432 222222222221
Q ss_pred ------cC---C-----cEEEEEecCCCCCHHHHHhh---cC--CCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccC
Q 003158 578 ------EE---G-----EQMLVYEFMSNGTLRDQLSA---KS--KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDI 638 (843)
Q Consensus 578 ------~~---~-----~~~lV~e~~~~gsL~~~l~~---~~--~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dl 638 (843)
.. . ..+++|+-+ -++|.+++.. .. ...+....++.+..|+.+.+++||+.| ++|+||
T Consensus 96 ~~~~~~~~~~~~~~~v~n~~~l~P~~-~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~G---lVHgdi 171 (288)
T PF14531_consen 96 KPPFFERGPGQSIYWVLNRFLLMPRA-QGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSYG---LVHGDI 171 (288)
T ss_dssp S-SEEEECETTEEEEEESEEEEEE---SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTT---EEEST-
T ss_pred CCcceecCCCCccceeehhhhccchh-hhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhcc---eEeccc
Confidence 11 1 337788888 5699887642 22 224556677788899999999999999 999999
Q ss_pred CCCcEEEcCCCcEEEeeccccccCCCCCCCCcccceeeeeecccCCccCchhcccC--------CCCchhhhHHHHHHHH
Q 003158 639 KASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTH--------KLTDKSDVYSLGVVFL 710 (843)
Q Consensus 639 kp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--------~~~~~sDvwS~G~~l~ 710 (843)
||+|++++.+|.++|+||+...... ........+..|.+||..... .++.+.|.|++|+++|
T Consensus 172 ~~~nfll~~~G~v~Lg~F~~~~r~g----------~~~~~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly 241 (288)
T PF14531_consen 172 KPENFLLDQDGGVFLGDFSSLVRAG----------TRYRCSEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLY 241 (288)
T ss_dssp SGGGEEE-TTS-EEE--GGGEEETT----------EEEEGGGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHH
T ss_pred ceeeEEEcCCCCEEEcChHHHeecC----------ceeeccCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHH
Confidence 9999999999999999999876532 111213456789999987542 4788999999999999
Q ss_pred HHHhCCCCCCCCcchHHHHHHHhhcccchhhccCCCCCCCHHHHHHHHHHHHHhcccCCCCC
Q 003158 711 ELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDAR 772 (843)
Q Consensus 711 elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~R 772 (843)
.|++|..||........ .+....... +.++.+..++...++.+|.+|
T Consensus 242 ~lWC~~lPf~~~~~~~~--------------~~~~f~~C~-~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 242 SLWCGRLPFGLSSPEAD--------------PEWDFSRCR-DMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp HHHHSS-STCCCGGGST--------------SGGGGTTSS----HHHHHHHHHHT-SSGGGS
T ss_pred HHHHccCCCCCCCcccc--------------ccccchhcC-CcCHHHHHHHHHHccCCcccC
Confidence 99999999975432110 000122233 677888888888888888776
No 432
>PRK10345 hypothetical protein; Provisional
Probab=99.77 E-value=4.2e-18 Score=171.00 Aligned_cols=137 Identities=17% Similarity=0.206 Sum_probs=106.4
Q ss_pred CCCCCcccccCCeeEEEEEeCCCcEEEEEEeccCChhhHHHHHHHHHHHHhc-----cCCcccceeeeeecCC---cE-E
Q 003158 513 FNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRL-----HHRNLVSLVGYCDEEG---EQ-M 583 (843)
Q Consensus 513 ~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-----~h~nIv~l~~~~~~~~---~~-~ 583 (843)
+...+.||+|+||.||. .-.++.. +||++........+.+.+|+++++.+ .||||++++|++.++. .. .
T Consensus 4 L~~~~~LG~G~~~~Vy~-hp~~~~k-~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~ 81 (210)
T PRK10345 4 LSEQSPLGTGRHRKCYA-HPEDAQR-CIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYD 81 (210)
T ss_pred cCCcceecCCCceEEEE-CCCCcCe-EEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEE
Confidence 34467899999999996 2224444 79988765445567899999999999 5799999999998763 33 3
Q ss_pred EEEec--CCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHH-HHHhcCCCCCEEeccCCCCcEEEcC----CCcEEEeec
Q 003158 584 LVYEF--MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGI-LYLHTEADPPVFHRDIKASNILLDH----KFTAKVADF 656 (843)
Q Consensus 584 lV~e~--~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL-~yLH~~~~~~iiH~Dlkp~NILl~~----~~~~kl~Df 656 (843)
+|+|| +.+|+|.+++.+. .+++. ..++.+++.++ +|||+++ |+||||||+|||++. ++.++|+||
T Consensus 82 ~I~e~~G~~~~tL~~~l~~~---~~~e~--~~~~~~~L~~l~~yLh~~~---IvhrDlKp~NILl~~~~~~~~~~~LiDg 153 (210)
T PRK10345 82 VIADFDGKPSITLTEFAEQC---RYEED--VAQLRQLLKKLKRYLLDNR---IVTMELKPQNILCQRISESEVIPVVCDN 153 (210)
T ss_pred EEecCCCCcchhHHHHHHcc---cccHh--HHHHHHHHHHHHHHHHHCC---EeecCCCHHHEEEeccCCCCCcEEEEEC
Confidence 78999 5579999999653 24444 35677888777 9999999 999999999999974 348999995
Q ss_pred ccc
Q 003158 657 GLS 659 (843)
Q Consensus 657 Gla 659 (843)
+.+
T Consensus 154 ~G~ 156 (210)
T PRK10345 154 IGE 156 (210)
T ss_pred CCC
Confidence 544
No 433
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.77 E-value=1.5e-18 Score=203.87 Aligned_cols=224 Identities=25% Similarity=0.387 Sum_probs=182.9
Q ss_pred CCCCEEEccCCcCCccCccccCCCCCCcEEEcccCcCCccCccccccCCCCCEEEccCCccccCCCcccCCCCCCceeec
Q 003158 17 KSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLL 96 (843)
Q Consensus 17 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L 96 (843)
.+...|+|++++++ .+|..+. ++|+.|+|++|+|+ .+|..+. .+|+.|+|++|+|+ .+|..+. .+|+.|+|
T Consensus 178 ~~~~~L~L~~~~Lt-sLP~~Ip--~~L~~L~Ls~N~Lt-sLP~~l~--~nL~~L~Ls~N~Lt-sLP~~l~--~~L~~L~L 248 (754)
T PRK15370 178 NNKTELRLKILGLT-TIPACIP--EQITTLILDNNELK-SLPENLQ--GNIKTLYANSNQLT-SIPATLP--DTIQEMEL 248 (754)
T ss_pred cCceEEEeCCCCcC-cCCcccc--cCCcEEEecCCCCC-cCChhhc--cCCCEEECCCCccc-cCChhhh--ccccEEEC
Confidence 46789999999999 6776654 58999999999999 5666553 58999999999999 5676554 48999999
Q ss_pred cCCCCCCCCCcccCCCCCCcEEEcCCCCCCCCCCCccccCCCCCcEEEcCCCCCCCCCCCCCCCCCCCEEEcccCcCCCC
Q 003158 97 DNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGS 176 (843)
Q Consensus 97 ~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~ 176 (843)
++|+++ .+|..+. .+|+.|+|++|+++ .+|..+. ++|+.|+|++|+|+.++..+. ++|+.|++++|+++ .
T Consensus 249 s~N~L~-~LP~~l~--s~L~~L~Ls~N~L~--~LP~~l~--~sL~~L~Ls~N~Lt~LP~~lp--~sL~~L~Ls~N~Lt-~ 318 (754)
T PRK15370 249 SINRIT-ELPERLP--SALQSLDLFHNKIS--CLPENLP--EELRYLSVYDNSIRTLPAHLP--SGITHLNVQSNSLT-A 318 (754)
T ss_pred cCCccC-cCChhHh--CCCCEEECcCCccC--ccccccC--CCCcEEECCCCccccCcccch--hhHHHHHhcCCccc-c
Confidence 999999 6677665 58999999999997 4677664 589999999999998876543 57999999999999 5
Q ss_pred CCCCCCCcCcCEEEccCCcCCCCCCcccCCCCCCcEEeCcCccCCCCCCchhhccccCCCCcceeEEcCCCCCCCCCCCC
Q 003158 177 IPPGRLSLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGSF 256 (843)
Q Consensus 177 ~p~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~l~~~~L~~L~l~~N~l~~~~~~~ 256 (843)
+|.... .+|+.|++++|.+++ +|..+. ++|+.|+|++|+|+ .+|..+. ++|+.|+|++|+|+.+|...
T Consensus 319 LP~~l~-~sL~~L~Ls~N~Lt~-LP~~l~--~sL~~L~Ls~N~L~-~LP~~lp-------~~L~~LdLs~N~Lt~LP~~l 386 (754)
T PRK15370 319 LPETLP-PGLKTLEAGENALTS-LPASLP--PELQVLDVSKNQIT-VLPETLP-------PTITTLDVSRNALTNLPENL 386 (754)
T ss_pred CCcccc-ccceeccccCCcccc-CChhhc--CcccEEECCCCCCC-cCChhhc-------CCcCEEECCCCcCCCCCHhH
Confidence 665433 589999999999995 666654 79999999999998 5776552 36789999999999998754
Q ss_pred cCCCCcEEEeccCccc
Q 003158 257 NIPPNVTVRLRGNPFC 272 (843)
Q Consensus 257 ~~~~l~~l~l~~Np~~ 272 (843)
. ..+..|++++|.+.
T Consensus 387 ~-~sL~~LdLs~N~L~ 401 (754)
T PRK15370 387 P-AALQIMQASRNNLV 401 (754)
T ss_pred H-HHHHHHhhccCCcc
Confidence 2 35778889998765
No 434
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.77 E-value=3.7e-18 Score=199.14 Aligned_cols=213 Identities=27% Similarity=0.345 Sum_probs=146.6
Q ss_pred CccccccCCccccCCCCCCEEEccCCcCCccCccccCCCCCCcEEEcccCcCCccCccccc-----------------cC
Q 003158 2 WNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFA-----------------NL 64 (843)
Q Consensus 2 ~N~i~~~~p~~i~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~-----------------~l 64 (843)
+|+|+ .+|. .+++|++|+|++|+|+ .+|.. .++|+.|+|++|.|+ .+|..+. .+
T Consensus 231 ~N~Lt-~LP~---lp~~Lk~LdLs~N~Lt-sLP~l---p~sL~~L~Ls~N~L~-~Lp~lp~~L~~L~Ls~N~Lt~LP~~p 301 (788)
T PRK15387 231 DNNLT-SLPA---LPPELRTLEVSGNQLT-SLPVL---PPGLLELSIFSNPLT-HLPALPSGLCKLWIFGNQLTSLPVLP 301 (788)
T ss_pred CCcCC-CCCC---CCCCCcEEEecCCccC-cccCc---ccccceeeccCCchh-hhhhchhhcCEEECcCCccccccccc
Confidence 58888 5664 3578999999999999 45543 346666666666665 3332211 12
Q ss_pred CCCCEEEccCCccccCCCcccCCCCCCceeeccCCCCCCCCCcccCCCCCCcEEEcCCCCCCCCCCCccccCCCCCcEEE
Q 003158 65 NKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLS 144 (843)
Q Consensus 65 ~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~ 144 (843)
++|+.|+|++|+|++ +|... .+|+.|++++|+|++ +|. + ..+|+.|+|++|+|+. +|.. ..+|+.|+
T Consensus 302 ~~L~~LdLS~N~L~~-Lp~lp---~~L~~L~Ls~N~L~~-LP~-l--p~~Lq~LdLS~N~Ls~--LP~l---p~~L~~L~ 368 (788)
T PRK15387 302 PGLQELSVSDNQLAS-LPALP---SELCKLWAYNNQLTS-LPT-L--PSGLQELSVSDNQLAS--LPTL---PSELYKLW 368 (788)
T ss_pred cccceeECCCCcccc-CCCCc---ccccccccccCcccc-ccc-c--ccccceEecCCCccCC--CCCC---Ccccceeh
Confidence 344555555555542 22211 234445555555542 232 1 1479999999999974 5653 35788999
Q ss_pred cCCCCCCCCCCCCCCCCCCCEEEcccCcCCCCCCCCCCCcCcCEEEccCCcCCCCCCcccCCCCCCcEEeCcCccCCCCC
Q 003158 145 LRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLSLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSI 224 (843)
Q Consensus 145 L~~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 224 (843)
+++|+|+.++.. ..+|+.|+|++|+|+ .+|.. ..+|+.|++++|+|++ +|.. ..+|+.|+|++|+|+ .+
T Consensus 369 Ls~N~L~~LP~l---~~~L~~LdLs~N~Lt-~LP~l--~s~L~~LdLS~N~Lss-IP~l---~~~L~~L~Ls~NqLt-~L 437 (788)
T PRK15387 369 AYNNRLTSLPAL---PSGLKELIVSGNRLT-SLPVL--PSELKELMVSGNRLTS-LPML---PSGLLSLSVYRNQLT-RL 437 (788)
T ss_pred hhccccccCccc---ccccceEEecCCccc-CCCCc--ccCCCEEEccCCcCCC-CCcc---hhhhhhhhhccCccc-cc
Confidence 999999987653 357999999999999 56653 2489999999999995 6654 346889999999998 78
Q ss_pred CchhhccccCCCCcceeEEcCCCCCCCC
Q 003158 225 PSSIWQSRTLNATETFILDFQNNNLTNI 252 (843)
Q Consensus 225 p~~~~~l~~l~~~~L~~L~l~~N~l~~~ 252 (843)
|..+..+.+ |..|+|++|+|++.
T Consensus 438 P~sl~~L~~-----L~~LdLs~N~Ls~~ 460 (788)
T PRK15387 438 PESLIHLSS-----ETTVNLEGNPLSER 460 (788)
T ss_pred ChHHhhccC-----CCeEECCCCCCCch
Confidence 998876654 55899999999864
No 435
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=99.76 E-value=1.6e-20 Score=211.38 Aligned_cols=241 Identities=31% Similarity=0.422 Sum_probs=177.0
Q ss_pred CCCCEEEccCCcCCccCccccCCCCCCcEEEcccCcCCccCccccccCCCCCEEEccCCccccCCCcccCCCCCCceeec
Q 003158 17 KSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLL 96 (843)
Q Consensus 17 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L 96 (843)
.+|++++++.|+++ .+|+.++.+.+|+.|+..+|+|+ .+|..+....+|+.|.+..|.++ -+|..+..++.|++|+|
T Consensus 241 ~nl~~~dis~n~l~-~lp~wi~~~~nle~l~~n~N~l~-~lp~ri~~~~~L~~l~~~~nel~-yip~~le~~~sL~tLdL 317 (1081)
T KOG0618|consen 241 LNLQYLDISHNNLS-NLPEWIGACANLEALNANHNRLV-ALPLRISRITSLVSLSAAYNELE-YIPPFLEGLKSLRTLDL 317 (1081)
T ss_pred ccceeeecchhhhh-cchHHHHhcccceEecccchhHH-hhHHHHhhhhhHHHHHhhhhhhh-hCCCcccccceeeeeee
Confidence 45677777777777 45577777777777777777775 66666667777777777777776 55556666777777777
Q ss_pred cCCCCCCCCCcccCCCCC-CcEEEcCCCCCCCCCCCc-cccCCCCCcEEEcCCCCCCCC-CCCCCCCCCCCEEEcccCcC
Q 003158 97 DNNNLTGYLPPELSELPK-LLILQLDNNNFEGTTIPA-SYSNMSKLLKLSLRNCSLQGP-MPDLSRIPNLGYLDLSSNQL 173 (843)
Q Consensus 97 ~~N~l~~~~~~~~~~l~~-L~~L~Ls~N~l~~~~~~~-~~~~l~~L~~L~L~~N~l~~~-~~~~~~l~~L~~L~Ls~N~l 173 (843)
..|+|....+..+.-+.. |..|+.+.|++.. .|. .=..++.|+.|++.+|.|+.- .|.+.+.++|+.|+|++|+|
T Consensus 318 ~~N~L~~lp~~~l~v~~~~l~~ln~s~n~l~~--lp~~~e~~~~~Lq~LylanN~Ltd~c~p~l~~~~hLKVLhLsyNrL 395 (1081)
T KOG0618|consen 318 QSNNLPSLPDNFLAVLNASLNTLNVSSNKLST--LPSYEENNHAALQELYLANNHLTDSCFPVLVNFKHLKVLHLSYNRL 395 (1081)
T ss_pred hhccccccchHHHhhhhHHHHHHhhhhccccc--cccccchhhHHHHHHHHhcCcccccchhhhccccceeeeeeccccc
Confidence 777777333333333333 6666666676652 231 113356788999999999863 44588889999999999999
Q ss_pred CCCCCCCCCCc--CcCEEEccCCcCCCCCCcccCCCCCCcEEeCcCccCCCCCCchhhccccCCCCcceeEEcCCCCCCC
Q 003158 174 NGSIPPGRLSL--NITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTN 251 (843)
Q Consensus 174 ~~~~p~~~~~~--~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~l~~~~L~~L~l~~N~l~~ 251 (843)
. .+|...... .|+.|+||+|.|+ .+|..+..++.|++|...+|+|. ..| .+.++ +.|+++|++.|+|+.
T Consensus 396 ~-~fpas~~~kle~LeeL~LSGNkL~-~Lp~tva~~~~L~tL~ahsN~l~-~fP-e~~~l-----~qL~~lDlS~N~L~~ 466 (1081)
T KOG0618|consen 396 N-SFPASKLRKLEELEELNLSGNKLT-TLPDTVANLGRLHTLRAHSNQLL-SFP-ELAQL-----PQLKVLDLSCNNLSE 466 (1081)
T ss_pred c-cCCHHHHhchHHhHHHhcccchhh-hhhHHHHhhhhhHHHhhcCCcee-ech-hhhhc-----CcceEEecccchhhh
Confidence 8 788765543 7999999999999 77899999999999999999998 666 45443 456799999999998
Q ss_pred CCCCC--cCCCCcEEEeccCcc
Q 003158 252 ISGSF--NIPPNVTVRLRGNPF 271 (843)
Q Consensus 252 ~~~~~--~~~~l~~l~l~~Np~ 271 (843)
+.... .-|+|++|+++||+|
T Consensus 467 ~~l~~~~p~p~LkyLdlSGN~~ 488 (1081)
T KOG0618|consen 467 VTLPEALPSPNLKYLDLSGNTR 488 (1081)
T ss_pred hhhhhhCCCcccceeeccCCcc
Confidence 86655 347899999999996
No 436
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.75 E-value=7.7e-18 Score=197.37 Aligned_cols=253 Identities=23% Similarity=0.279 Sum_probs=184.6
Q ss_pred HHHHHHcCCCCCCcccccCCeeEEEEEeCCCcEEEEEEeccCChhhHHHHHHHHHHHHhcc---CCcccceeeeeecCCc
Q 003158 505 EMALATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLH---HRNLVSLVGYCDEEGE 581 (843)
Q Consensus 505 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---h~nIv~l~~~~~~~~~ 581 (843)
+.++..+.|.+.+.||+|+||+||+|...+|+.||+|+=+....- +|.-=.+++.+|+ -+-|..+...+.-.+.
T Consensus 692 ~~~~~~~~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~W---EfYI~~q~~~RLk~~~~~~~~~~~~a~~~~~~ 768 (974)
T KOG1166|consen 692 EFEVGGEKFCISKEIGEGSYGSVYVATHSNGKLVALKVEKPPNPW---EFYICLQVMERLKPQMLPSIMHISSAHVFQNA 768 (974)
T ss_pred eeeecceeEEEEeeeccccceEEEEeecCCCcEEEEEeecCCCce---eeeehHHHHHhhchhhhcchHHHHHHHccCCc
Confidence 556667889999999999999999999888999999987654322 2222233444444 2345555555566778
Q ss_pred EEEEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEc-------CCCcEEEe
Q 003158 582 QMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLD-------HKFTAKVA 654 (843)
Q Consensus 582 ~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~-------~~~~~kl~ 654 (843)
-+||+||.+.|+|.+++. ....++|..++.++.|+++.+++||..+ |||+||||+|.|+. +..-++|+
T Consensus 769 S~lv~ey~~~Gtlld~~N--~~~~m~e~lv~~~~~qml~ive~lH~~~---IIHgDiKPDNfll~~~~~~~~~~~~l~lI 843 (974)
T KOG1166|consen 769 SVLVSEYSPYGTLLDLIN--TNKVMDEYLVMFFSCQMLRIVEHLHAMG---IIHGDIKPDNFLLRREICADSDSKGLYLI 843 (974)
T ss_pred ceeeeeccccccHHHhhc--cCCCCCchhhhHHHHHHHHHHHHHHhcc---eecccCCcceeEeecccCCCCcccceEEE
Confidence 899999999999999996 4456899999999999999999999999 99999999999994 23469999
Q ss_pred eccccccCCCCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhh
Q 003158 655 DFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQ 734 (843)
Q Consensus 655 DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~ 734 (843)
|||.+-.+..-. .........+|-.+-.+|...+..|++.+|-|.++.+++-|+.|+..= ..
T Consensus 844 DfG~siDm~lfp-----~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y~q-------------~~ 905 (974)
T KOG1166|consen 844 DFGRSIDMKLFP-----DGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKYME-------------VK 905 (974)
T ss_pred ecccceeeeEcC-----CCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHHHH-------------hc
Confidence 999986553221 123456677899999999999999999999999999999999986421 01
Q ss_pred cccchhhccCCCCC-CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhh
Q 003158 735 SSMMFSVIDGNMGS-YPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWN 787 (843)
Q Consensus 735 ~~~~~~~~~~~~~~-~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~ 787 (843)
.+..+.+... ... ...+.|.++..++ ++.+-..-|...++...++.++.
T Consensus 906 ~g~~~~~~~~-~~Ry~~~~~W~~~F~~l---LN~~~~~~p~l~~lr~~~~~~~~ 955 (974)
T KOG1166|consen 906 NGSSWMVKTN-FPRYWKRDMWNKFFDLL---LNPDCDTLPNLQELRTELEEVLA 955 (974)
T ss_pred CCcceecccc-chhhhhHHHHHHHHHHH---hCcCcccchhHHHHHHHHHHHHH
Confidence 1111111111 111 1334455554444 44666666777888777777654
No 437
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.75 E-value=2.1e-17 Score=207.56 Aligned_cols=253 Identities=22% Similarity=0.332 Sum_probs=150.7
Q ss_pred cccCCccccCCC-CCCEEEccCCcCCccCccccCCCCCCcEEEcccCcCCccCccccccCCCCCEEEccCCccccCCCcc
Q 003158 6 SGSIPKEIGNIK-SLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPE 84 (843)
Q Consensus 6 ~~~~p~~i~~l~-~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~ 84 (843)
...+|+.|..++ +|+.|++.++.++ .+|..| ...+|++|+|++|++. .++..+..+++|+.|+|++|.....+| .
T Consensus 577 ~~~lp~~~~~lp~~Lr~L~~~~~~l~-~lP~~f-~~~~L~~L~L~~s~l~-~L~~~~~~l~~Lk~L~Ls~~~~l~~ip-~ 652 (1153)
T PLN03210 577 RWHLPEGFDYLPPKLRLLRWDKYPLR-CMPSNF-RPENLVKLQMQGSKLE-KLWDGVHSLTGLRNIDLRGSKNLKEIP-D 652 (1153)
T ss_pred eeecCcchhhcCcccEEEEecCCCCC-CCCCcC-CccCCcEEECcCcccc-ccccccccCCCCCEEECCCCCCcCcCC-c
Confidence 334566665553 4666666666665 555555 3566666777666666 455556666667777776654333444 3
Q ss_pred cCCCCCCceeeccCCCCCCCCCcccCCCCCCcEEEcCCCCCCCCCCCccccCCCCCcEEEcCCCCCCCCCCCCCCCCCCC
Q 003158 85 LSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLG 164 (843)
Q Consensus 85 l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~ 164 (843)
+..+++|+.|+|++|.....+|..+.++++|+.|+|++|.... .+|..+ ++++|+.|+|++|......+.+ ..+|+
T Consensus 653 ls~l~~Le~L~L~~c~~L~~lp~si~~L~~L~~L~L~~c~~L~-~Lp~~i-~l~sL~~L~Lsgc~~L~~~p~~--~~nL~ 728 (1153)
T PLN03210 653 LSMATNLETLKLSDCSSLVELPSSIQYLNKLEDLDMSRCENLE-ILPTGI-NLKSLYRLNLSGCSRLKSFPDI--STNIS 728 (1153)
T ss_pred cccCCcccEEEecCCCCccccchhhhccCCCCEEeCCCCCCcC-ccCCcC-CCCCCCEEeCCCCCCccccccc--cCCcC
Confidence 5666667777776665555666666666667777666653322 345443 5566666666665432222221 23555
Q ss_pred EEEcccCcCCCCCCCCC-------------------------------CCcCcCEEEccCCcCCCCCCcccCCCCCCcEE
Q 003158 165 YLDLSSNQLNGSIPPGR-------------------------------LSLNITTIKLSNNKLTGTIPSNFSGLPRLQRL 213 (843)
Q Consensus 165 ~L~Ls~N~l~~~~p~~~-------------------------------~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 213 (843)
.|+|++|.+. .+|... ...+|+.|+|++|...+.+|..++++++|+.|
T Consensus 729 ~L~L~~n~i~-~lP~~~~l~~L~~L~l~~~~~~~l~~~~~~l~~~~~~~~~sL~~L~Ls~n~~l~~lP~si~~L~~L~~L 807 (1153)
T PLN03210 729 WLDLDETAIE-EFPSNLRLENLDELILCEMKSEKLWERVQPLTPLMTMLSPSLTRLFLSDIPSLVELPSSIQNLHKLEHL 807 (1153)
T ss_pred eeecCCCccc-cccccccccccccccccccchhhccccccccchhhhhccccchheeCCCCCCccccChhhhCCCCCCEE
Confidence 6666666554 333221 11367788888887777788888888888888
Q ss_pred eCcCccCCCCCCchhhccccC-----------C-----CCcceeEEcCCCCCCCCCCCC-cCCCCcEEEecc
Q 003158 214 FIANNSLSGSIPSSIWQSRTL-----------N-----ATETFILDFQNNNLTNISGSF-NIPPNVTVRLRG 268 (843)
Q Consensus 214 ~L~~N~l~~~~p~~~~~l~~l-----------~-----~~~L~~L~l~~N~l~~~~~~~-~~~~l~~l~l~~ 268 (843)
+|++|...+.+|..+ .+.+| . ..+|+.|+|++|.|+.+|... .++.|..|++.+
T Consensus 808 ~Ls~C~~L~~LP~~~-~L~sL~~L~Ls~c~~L~~~p~~~~nL~~L~Ls~n~i~~iP~si~~l~~L~~L~L~~ 878 (1153)
T PLN03210 808 EIENCINLETLPTGI-NLESLESLDLSGCSRLRTFPDISTNISDLNLSRTGIEEVPWWIEKFSNLSFLDMNG 878 (1153)
T ss_pred ECCCCCCcCeeCCCC-CccccCEEECCCCCccccccccccccCEeECCCCCCccChHHHhcCCCCCEEECCC
Confidence 888875444666543 11111 0 135667777777777776655 577777777766
No 438
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.75 E-value=3.7e-19 Score=203.54 Aligned_cols=172 Identities=28% Similarity=0.428 Sum_probs=122.2
Q ss_pred HcCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCChhhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEEec
Q 003158 510 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 588 (843)
Q Consensus 510 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e~ 588 (843)
.++|+.++.|-.|++|.||..+++ ..+.+|.|+-+.. .+.+- ++.....|.+|
T Consensus 82 e~df~~IklisngAygavylvrh~~trqrfa~kiNkq~------lilRn--ilt~a~npfvv------------------ 135 (1205)
T KOG0606|consen 82 ESDFNTIKLISNGAYGAVYLVRHKETRQRFAMKINKQN------LILRN--ILTFAGNPFVV------------------ 135 (1205)
T ss_pred ccccceeEeeccCCCCceeeeeccccccchhhcccccc------hhhhc--cccccCCccee------------------
Confidence 457888999999999999999876 4678888543321 11110 22222233322
Q ss_pred CCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCC---
Q 003158 589 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVP--- 665 (843)
Q Consensus 589 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~--- 665 (843)
|+=.+.++.-+. ++... +.+++|||+.+ |+|||+||+|.+++.-|.+|+.|||+++..-..
T Consensus 136 ---gDc~tllk~~g~--lPvdm--------vla~Eylh~yg---ivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~at 199 (1205)
T KOG0606|consen 136 ---GDCATLLKNIGP--LPVDM--------VLAVEYLHSYG---IVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLAT 199 (1205)
T ss_pred ---chhhhhcccCCC--Ccchh--------hHHhHhhccCC---eecCCCCCCcceeeecccccccchhhhhhhhhhccc
Confidence 444455533333 33222 67899999999 999999999999999999999999998653211
Q ss_pred -----CCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCc
Q 003158 666 -----DIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 723 (843)
Q Consensus 666 -----~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~ 723 (843)
.............++||+.|+|||++....|+..+|+|++|+++||.+.|+.||+...
T Consensus 200 nl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdt 262 (1205)
T KOG0606|consen 200 NLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDT 262 (1205)
T ss_pred hhhhcchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCC
Confidence 0000000111234589999999999999999999999999999999999999998754
No 439
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.74 E-value=6.6e-17 Score=203.07 Aligned_cols=248 Identities=18% Similarity=0.237 Sum_probs=154.8
Q ss_pred cCCccccCCCCCCEEEccCCcCCccCccccCCCCCCcEEEcccCcCCccCccccccCCCCCEEEccCCccccCCCcccCC
Q 003158 8 SIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSR 87 (843)
Q Consensus 8 ~~p~~i~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~ 87 (843)
.+|..| ...+|+.|+|.+|++. .++..+..+++|+.|+|++|.....+|. +..+++|+.|+|++|.....+|..+.+
T Consensus 603 ~lP~~f-~~~~L~~L~L~~s~l~-~L~~~~~~l~~Lk~L~Ls~~~~l~~ip~-ls~l~~Le~L~L~~c~~L~~lp~si~~ 679 (1153)
T PLN03210 603 CMPSNF-RPENLVKLQMQGSKLE-KLWDGVHSLTGLRNIDLRGSKNLKEIPD-LSMATNLETLKLSDCSSLVELPSSIQY 679 (1153)
T ss_pred CCCCcC-CccCCcEEECcCcccc-ccccccccCCCCCEEECCCCCCcCcCCc-cccCCcccEEEecCCCCccccchhhhc
Confidence 555555 4566667777776666 5566666666666666666543334443 566666666666666544456666666
Q ss_pred CCCCceeeccCCCCCCCCCcccCCCCCCcEEEcC---------------------CCCCCCCCCCccc------------
Q 003158 88 LPSLVHMLLDNNNLTGYLPPELSELPKLLILQLD---------------------NNNFEGTTIPASY------------ 134 (843)
Q Consensus 88 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls---------------------~N~l~~~~~~~~~------------ 134 (843)
+++|+.|+|++|.....+|..+ ++++|+.|+|+ +|.+. .+|..+
T Consensus 680 L~~L~~L~L~~c~~L~~Lp~~i-~l~sL~~L~Lsgc~~L~~~p~~~~nL~~L~L~~n~i~--~lP~~~~l~~L~~L~l~~ 756 (1153)
T PLN03210 680 LNKLEDLDMSRCENLEILPTGI-NLKSLYRLNLSGCSRLKSFPDISTNISWLDLDETAIE--EFPSNLRLENLDELILCE 756 (1153)
T ss_pred cCCCCEEeCCCCCCcCccCCcC-CCCCCCEEeCCCCCCccccccccCCcCeeecCCCccc--cccccccccccccccccc
Confidence 6666666666654333444433 34445554444 44443 223211
Q ss_pred ------------------cCCCCCcEEEcCCCCCCC-CCCCCCCCCCCCEEEcccCcCCCCCCCCCCCcCcCEEEccCCc
Q 003158 135 ------------------SNMSKLLKLSLRNCSLQG-PMPDLSRIPNLGYLDLSSNQLNGSIPPGRLSLNITTIKLSNNK 195 (843)
Q Consensus 135 ------------------~~l~~L~~L~L~~N~l~~-~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~Ls~N~ 195 (843)
...++|+.|+|++|.... +|..+..+++|+.|+|++|...+.+|......+|+.|+|++|.
T Consensus 757 ~~~~~l~~~~~~l~~~~~~~~~sL~~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~L~~LP~~~~L~sL~~L~Ls~c~ 836 (1153)
T PLN03210 757 MKSEKLWERVQPLTPLMTMLSPSLTRLFLSDIPSLVELPSSIQNLHKLEHLEIENCINLETLPTGINLESLESLDLSGCS 836 (1153)
T ss_pred cchhhccccccccchhhhhccccchheeCCCCCCccccChhhhCCCCCCEEECCCCCCcCeeCCCCCccccCEEECCCCC
Confidence 012356666666664333 3335777777888888776544467766555577888888775
Q ss_pred CCCCCCcccCCCCCCcEEeCcCccCCCCCCchhhccccCCCCcceeEEcCC-CCCCCCCCCC-cCCCCcEEEeccCc
Q 003158 196 LTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQN-NNLTNISGSF-NIPPNVTVRLRGNP 270 (843)
Q Consensus 196 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~l~~~~L~~L~l~~-N~l~~~~~~~-~~~~l~~l~l~~Np 270 (843)
....+|.. .++|+.|+|++|.|+ .+|.++..+. +|+.|+|++ |+|+.++... .++.+..+++.+++
T Consensus 837 ~L~~~p~~---~~nL~~L~Ls~n~i~-~iP~si~~l~-----~L~~L~L~~C~~L~~l~~~~~~L~~L~~L~l~~C~ 904 (1153)
T PLN03210 837 RLRTFPDI---STNISDLNLSRTGIE-EVPWWIEKFS-----NLSFLDMNGCNNLQRVSLNISKLKHLETVDFSDCG 904 (1153)
T ss_pred cccccccc---ccccCEeECCCCCCc-cChHHHhcCC-----CCCEEECCCCCCcCccCcccccccCCCeeecCCCc
Confidence 44444432 357888889998887 6787776554 556899988 8999998766 78888888887643
No 440
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=99.73 E-value=9.3e-20 Score=205.40 Aligned_cols=162 Identities=27% Similarity=0.329 Sum_probs=100.6
Q ss_pred cccCCCCCCcEEEcCCCCCCCCCCCccccCCCCCcEEEcCCCCCCCCCCCCCCCCCCCEEEcccCcCCCCCCCCCCC---
Q 003158 107 PELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLS--- 183 (843)
Q Consensus 107 ~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~--- 183 (843)
+++..+.+|+.|++.+|++. .+|..+..+++|+.|++..|.+..+++...++++|+.|+|..|+|. ..|+..+.
T Consensus 258 ~wi~~~~nle~l~~n~N~l~--~lp~ri~~~~~L~~l~~~~nel~yip~~le~~~sL~tLdL~~N~L~-~lp~~~l~v~~ 334 (1081)
T KOG0618|consen 258 EWIGACANLEALNANHNRLV--ALPLRISRITSLVSLSAAYNELEYIPPFLEGLKSLRTLDLQSNNLP-SLPDNFLAVLN 334 (1081)
T ss_pred HHHHhcccceEecccchhHH--hhHHHHhhhhhHHHHHhhhhhhhhCCCcccccceeeeeeehhcccc-ccchHHHhhhh
Confidence 44444444444444444442 3344444444444444455555556666777889999999999887 33331110
Q ss_pred ------------------------cCcCEEEccCCcCCCCCCcccCCCCCCcEEeCcCccCCCCCCchhhccccCCCCcc
Q 003158 184 ------------------------LNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATET 239 (843)
Q Consensus 184 ------------------------~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~l~~~~L 239 (843)
..|+.|+|.+|.|+...-..|.+++.|+.|+|++|+|. .+|++.. . ++..|
T Consensus 335 ~~l~~ln~s~n~l~~lp~~~e~~~~~Lq~LylanN~Ltd~c~p~l~~~~hLKVLhLsyNrL~-~fpas~~--~--kle~L 409 (1081)
T KOG0618|consen 335 ASLNTLNVSSNKLSTLPSYEENNHAALQELYLANNHLTDSCFPVLVNFKHLKVLHLSYNRLN-SFPASKL--R--KLEEL 409 (1081)
T ss_pred HHHHHHhhhhccccccccccchhhHHHHHHHHhcCcccccchhhhccccceeeeeecccccc-cCCHHHH--h--chHHh
Confidence 13667777777777766667777888888888888887 5555432 2 23356
Q ss_pred eeEEcCCCCCCCCCCCC-cCCCCcEEEeccCcccccCC
Q 003158 240 FILDFQNNNLTNISGSF-NIPPNVTVRLRGNPFCLNTN 276 (843)
Q Consensus 240 ~~L~l~~N~l~~~~~~~-~~~~l~~l~l~~Np~~c~~~ 276 (843)
+.|+||+|+|+.+|... .++.+.+|...+|.+.|-.+
T Consensus 410 eeL~LSGNkL~~Lp~tva~~~~L~tL~ahsN~l~~fPe 447 (1081)
T KOG0618|consen 410 EELNLSGNKLTTLPDTVANLGRLHTLRAHSNQLLSFPE 447 (1081)
T ss_pred HHHhcccchhhhhhHHHHhhhhhHHHhhcCCceeechh
Confidence 67888888888887655 66777777777777666543
No 441
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.73 E-value=6.7e-20 Score=188.39 Aligned_cols=246 Identities=23% Similarity=0.322 Sum_probs=197.4
Q ss_pred EEEccCCcCCccCccccCCCCCCcEEEcccCcCCccCccccccCCCCCEEEccCCccccCCCcccCCCCCCceeeccC-C
Q 003158 21 LLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDN-N 99 (843)
Q Consensus 21 ~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~-N 99 (843)
..+-++-.|+ .+|..+- +.-+.++|..|+|+.+.+.+|+.+++|++||||+|+|+.+-|.+|.++.+|..|-+.+ |
T Consensus 50 ~VdCr~~GL~-eVP~~LP--~~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~N 126 (498)
T KOG4237|consen 50 IVDCRGKGLT-EVPANLP--PETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNN 126 (498)
T ss_pred eEEccCCCcc-cCcccCC--CcceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCC
Confidence 4455666677 5665443 4578899999999988889999999999999999999999999999999998886666 9
Q ss_pred CCCCCCCcccCCCCCCcEEEcCCCCCCCCCCCccccCCCCCcEEEcCCCCCCCCCC-CCCCCCCCCEEEcccCcCCC---
Q 003158 100 NLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMP-DLSRIPNLGYLDLSSNQLNG--- 175 (843)
Q Consensus 100 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~--- 175 (843)
+|+.+....|.+|..|+.|.+.-|++.. .....|..+++|..|.+.+|.++.+.. .|..+..++.+.+..|.+..
T Consensus 127 kI~~l~k~~F~gL~slqrLllNan~i~C-ir~~al~dL~~l~lLslyDn~~q~i~~~tf~~l~~i~tlhlA~np~icdCn 205 (498)
T KOG4237|consen 127 KITDLPKGAFGGLSSLQRLLLNANHINC-IRQDALRDLPSLSLLSLYDNKIQSICKGTFQGLAAIKTLHLAQNPFICDCN 205 (498)
T ss_pred chhhhhhhHhhhHHHHHHHhcChhhhcc-hhHHHHHHhhhcchhcccchhhhhhccccccchhccchHhhhcCccccccc
Confidence 9998777899999999999999999986 457789999999999999999998888 59999999999999998321
Q ss_pred --------------------------------CCCCCCCCcCcCEE--EccC-CcCCCCCC-cccCCCCCCcEEeCcCcc
Q 003158 176 --------------------------------SIPPGRLSLNITTI--KLSN-NKLTGTIP-SNFSGLPRLQRLFIANNS 219 (843)
Q Consensus 176 --------------------------------~~p~~~~~~~L~~L--~Ls~-N~l~~~~p-~~~~~l~~L~~L~L~~N~ 219 (843)
.++...+...++.+ .++. +...+..| ..|.+|++|+.|+|++|+
T Consensus 206 L~wla~~~a~~~ietsgarc~~p~rl~~~Ri~q~~a~kf~c~~esl~s~~~~~d~~d~~cP~~cf~~L~~L~~lnlsnN~ 285 (498)
T KOG4237|consen 206 LPWLADDLAMNPIETSGARCVSPYRLYYKRINQEDARKFLCSLESLPSRLSSEDFPDSICPAKCFKKLPNLRKLNLSNNK 285 (498)
T ss_pred cchhhhHHhhchhhcccceecchHHHHHHHhcccchhhhhhhHHhHHHhhccccCcCCcChHHHHhhcccceEeccCCCc
Confidence 01111111122222 1222 22322333 578999999999999999
Q ss_pred CCCCCCchhhccccCCCCcceeEEcCCCCCCCCCCCC--cCCCCcEEEeccCcccccC
Q 003158 220 LSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGSF--NIPPNVTVRLRGNPFCLNT 275 (843)
Q Consensus 220 l~~~~p~~~~~l~~l~~~~L~~L~l~~N~l~~~~~~~--~~~~l~~l~l~~Np~~c~~ 275 (843)
|++.-+.+|.++..+ +.|.|..|+|..+.... ++..|.+|+|+||.+.|--
T Consensus 286 i~~i~~~aFe~~a~l-----~eL~L~~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~ 338 (498)
T KOG4237|consen 286 ITRIEDGAFEGAAEL-----QELYLTRNKLEFVSSGMFQGLSGLKTLSLYDNQITTVA 338 (498)
T ss_pred cchhhhhhhcchhhh-----hhhhcCcchHHHHHHHhhhccccceeeeecCCeeEEEe
Confidence 999999999876655 48999999999998765 7999999999999998753
No 442
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.71 E-value=7.7e-17 Score=164.40 Aligned_cols=134 Identities=20% Similarity=0.330 Sum_probs=114.2
Q ss_pred CcccccCCeeEEEEEeCCCcEEEEEEeccCChh--------hHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEEec
Q 003158 517 TQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQ--------GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 588 (843)
Q Consensus 517 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--------~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e~ 588 (843)
+.||+|++|.||+|.+ +|..|++|+....... ...++.+|++++..++|++|.....++.+.+..++||||
T Consensus 2 ~~l~~G~~~~vy~~~~-~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~ 80 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF-LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVMEY 80 (211)
T ss_pred cccccCceEEEEEEee-CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEEE
Confidence 5799999999999987 6778999986543211 124578899999999999998888888777888999999
Q ss_pred CCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeecccccc
Q 003158 589 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRL 661 (843)
Q Consensus 589 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~ 661 (843)
++|++|.+++.... . .+..++.+++.+|.++|+.+ ++|||++|+||+++ ++.++|+|||.+..
T Consensus 81 ~~G~~L~~~~~~~~-----~-~~~~i~~~i~~~l~~lH~~~---i~H~Dl~p~Nil~~-~~~~~liDf~~a~~ 143 (211)
T PRK14879 81 IEGEPLKDLINSNG-----M-EELELSREIGRLVGKLHSAG---IIHGDLTTSNMILS-GGKIYLIDFGLAEF 143 (211)
T ss_pred eCCcCHHHHHHhcc-----H-HHHHHHHHHHHHHHHHHhCC---cccCCCCcccEEEE-CCCEEEEECCcccC
Confidence 99999999985432 1 77889999999999999999 99999999999999 78999999998864
No 443
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.71 E-value=1e-19 Score=166.37 Aligned_cols=161 Identities=29% Similarity=0.480 Sum_probs=150.3
Q ss_pred ccCCCCCCEEEccCCcCCccCccccCCCCCCcEEEcccCcCCccCccccccCCCCCEEEccCCccccCCCcccCCCCCCc
Q 003158 13 IGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLV 92 (843)
Q Consensus 13 i~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~ 92 (843)
+.++++.+.|.|++|+++ .+|+.+..|.+|+.|++++|+|. .+|.+++.+++|+.|+++-|++. +.|..|+.+|.|+
T Consensus 29 Lf~~s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~le 105 (264)
T KOG0617|consen 29 LFNMSNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPALE 105 (264)
T ss_pred ccchhhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCchhh
Confidence 446788999999999999 88889999999999999999999 88999999999999999999998 8999999999999
Q ss_pred eeeccCCCCC-CCCCcccCCCCCCcEEEcCCCCCCCCCCCccccCCCCCcEEEcCCCCCCCCCCCCCCCCCCCEEEcccC
Q 003158 93 HMLLDNNNLT-GYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSN 171 (843)
Q Consensus 93 ~L~L~~N~l~-~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~Ls~N 171 (843)
.|||.+|++. ..+|..|..++.|+-|+|++|.+. .+|..++++++|+.|.+..|.+-.+|..++.+..|+.|++.+|
T Consensus 106 vldltynnl~e~~lpgnff~m~tlralyl~dndfe--~lp~dvg~lt~lqil~lrdndll~lpkeig~lt~lrelhiqgn 183 (264)
T KOG0617|consen 106 VLDLTYNNLNENSLPGNFFYMTTLRALYLGDNDFE--ILPPDVGKLTNLQILSLRDNDLLSLPKEIGDLTRLRELHIQGN 183 (264)
T ss_pred hhhccccccccccCCcchhHHHHHHHHHhcCCCcc--cCChhhhhhcceeEEeeccCchhhCcHHHHHHHHHHHHhcccc
Confidence 9999999998 568889999999999999999997 5899999999999999999999999999999999999999999
Q ss_pred cCCCCCCC
Q 003158 172 QLNGSIPP 179 (843)
Q Consensus 172 ~l~~~~p~ 179 (843)
+++ .+|+
T Consensus 184 rl~-vlpp 190 (264)
T KOG0617|consen 184 RLT-VLPP 190 (264)
T ss_pred eee-ecCh
Confidence 998 4544
No 444
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.70 E-value=7.6e-17 Score=165.92 Aligned_cols=202 Identities=21% Similarity=0.259 Sum_probs=143.5
Q ss_pred cCCcccceeeeeec---------------------------CCcEEEEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHH
Q 003158 565 HHRNLVSLVGYCDE---------------------------EGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALG 617 (843)
Q Consensus 565 ~h~nIv~l~~~~~~---------------------------~~~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ 617 (843)
+|||||++.++|.+ ...+|+||.-++ .+|..++-.+. .+.....-|..|
T Consensus 274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~-~tLr~yl~~~~---~s~r~~~~~laQ 349 (598)
T KOG4158|consen 274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYR-QTLREYLWTRH---RSYRTGRVILAQ 349 (598)
T ss_pred CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcch-hhHHHHHhcCC---CchHHHHHHHHH
Confidence 59999999887633 235699999884 59999996543 344555668889
Q ss_pred HHHHHHHHhcCCCCCEEeccCCCCcEEEc--CCC--cEEEeeccccccCCCCCCCCcccceeeeeecccCCccCchhccc
Q 003158 618 SSRGILYLHTEADPPVFHRDIKASNILLD--HKF--TAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT 693 (843)
Q Consensus 618 ia~aL~yLH~~~~~~iiH~Dlkp~NILl~--~~~--~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~ 693 (843)
+++|+.|||+++ |.|||+|++|||+. +|+ .+.|+|||++---+.....-.. .......-|...-||||+...
T Consensus 350 lLEav~hL~~hg---vAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy-~S~~Vd~GGNa~lmAPEi~ta 425 (598)
T KOG4158|consen 350 LLEAVTHLHKHG---VAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPY-ESDEVDLGGNAKLMAPEIATA 425 (598)
T ss_pred HHHHHHHHHHcc---chhhcccccceEEEecCCCCcEEEEcccceeeecccccccccc-ccccccCCCcceecchhhhhc
Confidence 999999999999 99999999999983 444 5789999987432211000000 011122346778999999875
Q ss_pred CC------CCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhccCCCCCCCHHHHHHHHHHHHHhccc
Q 003158 694 HK------LTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQD 767 (843)
Q Consensus 694 ~~------~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~ 767 (843)
.+ --.++|.|+.|.+.||+++...||.......-..+ .++ +..++..|+.++..+.+++...++.
T Consensus 426 ~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~r-~Yq--------e~qLPalp~~vpp~~rqlV~~lL~r 496 (598)
T KOG4158|consen 426 VPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDTR-TYQ--------ESQLPALPSRVPPVARQLVFDLLKR 496 (598)
T ss_pred CCCCceeeccchhhhhhhhhhHHHHhccCCcccccchheechh-hhh--------hhhCCCCcccCChHHHHHHHHHhcC
Confidence 32 12489999999999999999999986332111111 112 2235567888999999999999999
Q ss_pred CCCCCCCHHHHHHHHH
Q 003158 768 ETDARPSMSEVMRELE 783 (843)
Q Consensus 768 ~p~~RPs~~~vl~~L~ 783 (843)
+|.+|++..-....++
T Consensus 497 ~pskRvsp~iAANvl~ 512 (598)
T KOG4158|consen 497 DPSKRVSPNIAANVLN 512 (598)
T ss_pred CccccCCccHHHhHHH
Confidence 9999998765554444
No 445
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.70 E-value=1.3e-16 Score=160.87 Aligned_cols=140 Identities=19% Similarity=0.166 Sum_probs=110.7
Q ss_pred HHcCCCCCCcccccCCeeEEEEEeCCCcEEEEEEeccCChh----------------------hHHHHHHHHHHHHhccC
Q 003158 509 ATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQ----------------------GEKEFLTEIQFLSRLHH 566 (843)
Q Consensus 509 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~----------------------~~~~~~~E~~~l~~l~h 566 (843)
....|.+.+.||+|+||.||+|...+|+.||||++...... ....+..|+.++..+.|
T Consensus 13 ~~~~~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~ 92 (198)
T cd05144 13 RGVVESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYE 92 (198)
T ss_pred cCchhhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHH
Confidence 33347788999999999999999888999999987642200 11236778999999988
Q ss_pred Cc--ccceeeeeecCCcEEEEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEE
Q 003158 567 RN--LVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNIL 644 (843)
Q Consensus 567 ~n--Iv~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NIL 644 (843)
++ +.+.++ ....++||||+++++|.++... .....++.++++++.++|+.+ |+||||||+||+
T Consensus 93 ~~i~v~~~~~----~~~~~lv~e~~~g~~L~~~~~~--------~~~~~~~~~i~~~l~~lh~~g---i~H~Dl~p~Nil 157 (198)
T cd05144 93 EGFPVPKPID----WNRHAVVMEYIDGVELYRVRVL--------EDPEEVLDEILEEIVKAYKHG---IIHGDLSEFNIL 157 (198)
T ss_pred cCCCCCceee----cCCceEEEEEeCCcchhhcccc--------ccHHHHHHHHHHHHHHHHHCC---CCcCCCCcccEE
Confidence 74 444443 2456899999999999776421 234568899999999999998 999999999999
Q ss_pred EcCCCcEEEeeccccccCC
Q 003158 645 LDHKFTAKVADFGLSRLAP 663 (843)
Q Consensus 645 l~~~~~~kl~DfGla~~~~ 663 (843)
+++++.++|+|||++....
T Consensus 158 l~~~~~~~liDfg~~~~~~ 176 (198)
T cd05144 158 VDDDEKIYIIDWPQMVSTD 176 (198)
T ss_pred EcCCCcEEEEECCccccCC
Confidence 9999999999999996543
No 446
>smart00090 RIO RIO-like kinase.
Probab=99.70 E-value=1.1e-16 Score=165.03 Aligned_cols=143 Identities=20% Similarity=0.159 Sum_probs=110.2
Q ss_pred CCCCCCcccccCCeeEEEEE--eCCCcEEEEEEeccCChh------------------------hHHHHHHHHHHHHhcc
Q 003158 512 NFNSSTQIGQGGYGKVYKGI--LPDGTVVAVKRAQEGSLQ------------------------GEKEFLTEIQFLSRLH 565 (843)
Q Consensus 512 ~~~~~~~lg~G~~g~Vy~~~--~~~~~~vavK~~~~~~~~------------------------~~~~~~~E~~~l~~l~ 565 (843)
-|.+.+.||+|+||.||+|. ..+|+.||+|++...... ....+.+|++.+.++.
T Consensus 29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~ 108 (237)
T smart00090 29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLY 108 (237)
T ss_pred hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 36677899999999999998 568999999998743210 0123578999999997
Q ss_pred CCc--ccceeeeeecCCcEEEEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcE
Q 003158 566 HRN--LVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNI 643 (843)
Q Consensus 566 h~n--Iv~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NI 643 (843)
+.. +.+++++ ...++||||+++++|....... ..........++.|++.++.+||+.+. |+||||||+||
T Consensus 109 ~~~i~~p~~~~~----~~~~lV~E~~~g~~L~~~~~~~--~~~~~~~~~~i~~qi~~~l~~LH~~g~--iiH~Dikp~NI 180 (237)
T smart00090 109 EAGVPVPKPIAW----RRNVLVMEFIGGDGLPAPRLKD--VEPEEEEEFELYDDILEEMRKLYKEGE--LVHGDLSEYNI 180 (237)
T ss_pred hcCCCCCeeeEe----cCceEEEEEecCCccccccccc--CCcchHHHHHHHHHHHHHHHHHHhcCC--EEeCCCChhhE
Confidence 633 3344432 2358999999998887664222 235556677899999999999998763 99999999999
Q ss_pred EEcCCCcEEEeeccccccCC
Q 003158 644 LLDHKFTAKVADFGLSRLAP 663 (843)
Q Consensus 644 Ll~~~~~~kl~DfGla~~~~ 663 (843)
+++ ++.++|+|||.|....
T Consensus 181 li~-~~~i~LiDFg~a~~~~ 199 (237)
T smart00090 181 LVH-DGKVVIIDVSQSVELD 199 (237)
T ss_pred EEE-CCCEEEEEChhhhccC
Confidence 999 8899999999987543
No 447
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.69 E-value=1.6e-16 Score=160.44 Aligned_cols=131 Identities=22% Similarity=0.337 Sum_probs=108.2
Q ss_pred cccccCCeeEEEEEeCCCcEEEEEEeccCChh--------hHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEEecC
Q 003158 518 QIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQ--------GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFM 589 (843)
Q Consensus 518 ~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--------~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e~~ 589 (843)
.||+|+||+||+|.+ ++..|++|........ ...++.+|+++++.++|+++.....++......++||||+
T Consensus 1 ~ig~G~~~~vy~~~~-~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~ 79 (199)
T TIGR03724 1 LIAKGAEAIIYLGDF-LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEYI 79 (199)
T ss_pred CCCCCceEEEEEeec-CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEE
Confidence 389999999999985 5788999986532211 1256788999999999988766666666677789999999
Q ss_pred CCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccC
Q 003158 590 SNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLA 662 (843)
Q Consensus 590 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~ 662 (843)
+|++|.+++..... .++.+++++|.++|+.+ ++|||++|+||+++ ++.++++|||++...
T Consensus 80 ~g~~l~~~~~~~~~---------~~~~~i~~~l~~lH~~g---i~H~Dl~~~Nil~~-~~~~~liDfg~a~~~ 139 (199)
T TIGR03724 80 EGKPLKDVIEEGND---------ELLREIGRLVGKLHKAG---IVHGDLTTSNIIVR-DDKLYLIDFGLGKYS 139 (199)
T ss_pred CCccHHHHHhhcHH---------HHHHHHHHHHHHHHHCC---eecCCCCcceEEEE-CCcEEEEECCCCcCC
Confidence 99999998754211 68999999999999999 99999999999999 889999999998753
No 448
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.69 E-value=2.7e-16 Score=182.57 Aligned_cols=140 Identities=21% Similarity=0.282 Sum_probs=113.0
Q ss_pred HHHcCCCCCCcccccCCeeEEEEEeCCCcEEEEEEeccC-Ch------hhHHHHHHHHHHHHhccCCcccceeeeeecCC
Q 003158 508 LATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEG-SL------QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEG 580 (843)
Q Consensus 508 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~-~~------~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~ 580 (843)
.....|...+.||+|+||+||+|.+.+...++.+..... .. ...+++.+|+++++.++|++++....++.+..
T Consensus 330 ~~~~~~~~~~~iG~G~~g~Vy~~~~~~~~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~ 409 (535)
T PRK09605 330 EVKRRKIPDHLIGKGAEADIKKGEYLGRDAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPE 409 (535)
T ss_pred ccccccCccceeccCCcEEEEEEeecCccceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCC
Confidence 334556678999999999999998755443332222211 11 12356889999999999999998888887777
Q ss_pred cEEEEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccc
Q 003158 581 EQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSR 660 (843)
Q Consensus 581 ~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~ 660 (843)
..++||||+++++|.+++. ....++.+++++|.|||+.+ ++||||||+||++ +++.++|+|||+++
T Consensus 410 ~~~lv~E~~~g~~L~~~l~----------~~~~~~~~i~~~L~~lH~~g---iiHrDlkp~NILl-~~~~~~liDFGla~ 475 (535)
T PRK09605 410 EKTIVMEYIGGKDLKDVLE----------GNPELVRKVGEIVAKLHKAG---IVHGDLTTSNFIV-RDDRLYLIDFGLGK 475 (535)
T ss_pred CCEEEEEecCCCcHHHHHH----------HHHHHHHHHHHHHHHHHhCC---CccCCCChHHEEE-ECCcEEEEeCcccc
Confidence 8899999999999999884 34678999999999999999 9999999999999 67899999999997
Q ss_pred c
Q 003158 661 L 661 (843)
Q Consensus 661 ~ 661 (843)
.
T Consensus 476 ~ 476 (535)
T PRK09605 476 Y 476 (535)
T ss_pred c
Confidence 5
No 449
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.68 E-value=6.1e-19 Score=192.19 Aligned_cols=267 Identities=20% Similarity=0.255 Sum_probs=181.2
Q ss_pred cccc-ccCCccccCCCCCCEEEccCCcCCc----cCccccCCCCCCcEEEcccCcCCc------cCccccccCCCCCEEE
Q 003158 3 NKIS-GSIPKEIGNIKSLELLLLNGNELTG----SLPEELGYLPKLDRIQIDQNYISG------SLPKSFANLNKTRHFH 71 (843)
Q Consensus 3 N~i~-~~~p~~i~~l~~L~~L~L~~n~l~~----~~p~~~~~l~~L~~L~L~~N~l~~------~~~~~~~~l~~L~~L~ 71 (843)
|+++ +..+..|..+.+|+.|++++|.++. .++..+...++|++|+++++.+.+ .++..+..+++|+.|+
T Consensus 8 ~~l~~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~i~~~l~~~~~l~~l~l~~~~~~~~~~~~~~~~~~l~~~~~L~~L~ 87 (319)
T cd00116 8 ELLKTERATELLPKLLCLQVLRLEGNTLGEEAAKALASALRPQPSLKELCLSLNETGRIPRGLQSLLQGLTKGCGLQELD 87 (319)
T ss_pred CcccccchHHHHHHHhhccEEeecCCCCcHHHHHHHHHHHhhCCCceEEeccccccCCcchHHHHHHHHHHhcCceeEEE
Confidence 3444 3444555667789999999998853 256667778889999999888772 2345567788999999
Q ss_pred ccCCccccCCCcccCCCCC---CceeeccCCCCCC----CCCcccCCC-CCCcEEEcCCCCCCCC---CCCccccCCCCC
Q 003158 72 MNNNSISGQIPPELSRLPS---LVHMLLDNNNLTG----YLPPELSEL-PKLLILQLDNNNFEGT---TIPASYSNMSKL 140 (843)
Q Consensus 72 Ls~N~l~~~~~~~l~~l~~---L~~L~L~~N~l~~----~~~~~~~~l-~~L~~L~Ls~N~l~~~---~~~~~~~~l~~L 140 (843)
+++|.+.+..+..+..+.+ |+.|++++|++++ .+...+..+ ++|+.|+|++|.+++. .+...+..+++|
T Consensus 88 l~~~~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~L 167 (319)
T cd00116 88 LSDNALGPDGCGVLESLLRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLVLGRNRLEGASCEALAKALRANRDL 167 (319)
T ss_pred ccCCCCChhHHHHHHHHhccCcccEEEeeCCccchHHHHHHHHHHHhCCCCceEEEcCCCcCCchHHHHHHHHHHhCCCc
Confidence 9999887655555554444 9999999998873 223345566 8889999999988741 123456677889
Q ss_pred cEEEcCCCCCCCC-----CCCCCCCCCCCEEEcccCcCCCCCCC----C-CCCcCcCEEEccCCcCCCCCCcccC-----
Q 003158 141 LKLSLRNCSLQGP-----MPDLSRIPNLGYLDLSSNQLNGSIPP----G-RLSLNITTIKLSNNKLTGTIPSNFS----- 205 (843)
Q Consensus 141 ~~L~L~~N~l~~~-----~~~~~~l~~L~~L~Ls~N~l~~~~p~----~-~~~~~L~~L~Ls~N~l~~~~p~~~~----- 205 (843)
++|+|++|.+++. ...+..+++|+.|+|++|.+++.... . ....+|+.|++++|.+++.....+.
T Consensus 168 ~~L~l~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~~~~~~~L~~L~ls~n~l~~~~~~~l~~~~~~ 247 (319)
T cd00116 168 KELNLANNGIGDAGIRALAEGLKANCNLEVLDLNNNGLTDEGASALAETLASLKSLEVLNLGDNNLTDAGAAALASALLS 247 (319)
T ss_pred CEEECcCCCCchHHHHHHHHHHHhCCCCCEEeccCCccChHHHHHHHHHhcccCCCCEEecCCCcCchHHHHHHHHHHhc
Confidence 9999999988742 12245567899999999988643221 1 1123788999999888753333322
Q ss_pred CCCCCcEEeCcCccCCCCCCchhh-ccccCCCCcceeEEcCCCCCCCCCCCC------cC-CCCcEEEeccCcc
Q 003158 206 GLPRLQRLFIANNSLSGSIPSSIW-QSRTLNATETFILDFQNNNLTNISGSF------NI-PPNVTVRLRGNPF 271 (843)
Q Consensus 206 ~l~~L~~L~L~~N~l~~~~p~~~~-~l~~l~~~~L~~L~l~~N~l~~~~~~~------~~-~~l~~l~l~~Np~ 271 (843)
..+.|++|++++|.++......+. .+.. .++|+.+++++|.++..+... .. +.+..+++.+|||
T Consensus 248 ~~~~L~~L~l~~n~i~~~~~~~l~~~~~~--~~~L~~l~l~~N~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (319)
T cd00116 248 PNISLLTLSLSCNDITDDGAKDLAEVLAE--KESLLELDLRGNKFGEEGAQLLAESLLEPGNELESLWVKDDSF 319 (319)
T ss_pred cCCCceEEEccCCCCCcHHHHHHHHHHhc--CCCccEEECCCCCCcHHHHHHHHHHHhhcCCchhhcccCCCCC
Confidence 247889999999988733222221 1222 256778999999888664311 23 6788888888876
No 450
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.66 E-value=4.1e-17 Score=175.55 Aligned_cols=128 Identities=27% Similarity=0.401 Sum_probs=108.2
Q ss_pred CcEEEEEecCCCCCHHHHHhh-cCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccc
Q 003158 580 GEQMLVYEFMSNGTLRDQLSA-KSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGL 658 (843)
Q Consensus 580 ~~~~lV~e~~~~gsL~~~l~~-~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGl 658 (843)
...++.|++|.-.+|.+||.+ ......++.....++.|++.|++| ++ .+|+|+||.||++..+..+||+|||+
T Consensus 329 ~~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k~---~ihrdlkp~nif~~~d~q~kIgDFgl 402 (516)
T KOG1033|consen 329 VYLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---KG---LIHRDLKPSNIFFSDDDQLKIGDFGL 402 (516)
T ss_pred cchhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---cc---chhhhccccccccccchhhhhhhhhh
Confidence 357899999999999999974 334557788899999999999999 67 89999999999999999999999999
Q ss_pred cccCCCCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHh
Q 003158 659 SRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT 714 (843)
Q Consensus 659 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~ellt 714 (843)
........ ....+....+...||..||+||.+.+..|+.++||||+|++++|++.
T Consensus 403 ~ts~~~~~-~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~ 457 (516)
T KOG1033|consen 403 VTSQDKDE-TVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLI 457 (516)
T ss_pred eeecccCC-cccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHH
Confidence 87665432 11112233456779999999999999999999999999999999996
No 451
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.65 E-value=3.8e-18 Score=185.90 Aligned_cols=241 Identities=22% Similarity=0.251 Sum_probs=185.3
Q ss_pred CCccccCCCCCCEEEccCCcCC------ccCccccCCCCCCcEEEcccCcCCccCccccccCCC---CCEEEccCCcccc
Q 003158 9 IPKEIGNIKSLELLLLNGNELT------GSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNK---TRHFHMNNNSISG 79 (843)
Q Consensus 9 ~p~~i~~l~~L~~L~L~~n~l~------~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~---L~~L~Ls~N~l~~ 79 (843)
++..+...++|+.|+++++.+. ..++..+..+++|++|+|++|.+.+..+..+..+.+ |+.|++++|+++.
T Consensus 43 i~~~l~~~~~l~~l~l~~~~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~~ 122 (319)
T cd00116 43 LASALRPQPSLKELCLSLNETGRIPRGLQSLLQGLTKGCGLQELDLSDNALGPDGCGVLESLLRSSSLQELKLNNNGLGD 122 (319)
T ss_pred HHHHHhhCCCceEEeccccccCCcchHHHHHHHHHHhcCceeEEEccCCCCChhHHHHHHHHhccCcccEEEeeCCccch
Confidence 5566777888999999999887 234567888999999999999998777777776666 9999999999973
Q ss_pred ----CCCcccCCC-CCCceeeccCCCCCCC----CCcccCCCCCCcEEEcCCCCCCCCC---CCccccCCCCCcEEEcCC
Q 003158 80 ----QIPPELSRL-PSLVHMLLDNNNLTGY----LPPELSELPKLLILQLDNNNFEGTT---IPASYSNMSKLLKLSLRN 147 (843)
Q Consensus 80 ----~~~~~l~~l-~~L~~L~L~~N~l~~~----~~~~~~~l~~L~~L~Ls~N~l~~~~---~~~~~~~l~~L~~L~L~~ 147 (843)
.+...+..+ ++|+.|+|++|.+++. +...+..+++|++|+|++|.+++.. ++..+..+++|+.|+|++
T Consensus 123 ~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~ 202 (319)
T cd00116 123 RGLRLLAKGLKDLPPALEKLVLGRNRLEGASCEALAKALRANRDLKELNLANNGIGDAGIRALAEGLKANCNLEVLDLNN 202 (319)
T ss_pred HHHHHHHHHHHhCCCCceEEEcCCCcCCchHHHHHHHHHHhCCCcCEEECcCCCCchHHHHHHHHHHHhCCCCCEEeccC
Confidence 233455667 8999999999999842 3445677889999999999997422 233456667999999999
Q ss_pred CCCCCCCC-----CCCCCCCCCEEEcccCcCCCCCCC----CCC--CcCcCEEEccCCcCCC----CCCcccCCCCCCcE
Q 003158 148 CSLQGPMP-----DLSRIPNLGYLDLSSNQLNGSIPP----GRL--SLNITTIKLSNNKLTG----TIPSNFSGLPRLQR 212 (843)
Q Consensus 148 N~l~~~~~-----~~~~l~~L~~L~Ls~N~l~~~~p~----~~~--~~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~ 212 (843)
|.+++... .+..+++|+.|++++|.+++.... ... ..+|+.|++++|.++. .+...+..+++|+.
T Consensus 203 n~i~~~~~~~l~~~~~~~~~L~~L~ls~n~l~~~~~~~l~~~~~~~~~~L~~L~l~~n~i~~~~~~~l~~~~~~~~~L~~ 282 (319)
T cd00116 203 NGLTDEGASALAETLASLKSLEVLNLGDNNLTDAGAAALASALLSPNISLLTLSLSCNDITDDGAKDLAEVLAEKESLLE 282 (319)
T ss_pred CccChHHHHHHHHHhcccCCCCEEecCCCcCchHHHHHHHHHHhccCCCceEEEccCCCCCcHHHHHHHHHHhcCCCccE
Confidence 99975432 367789999999999999852111 111 2489999999999972 33456677899999
Q ss_pred EeCcCccCCCCCCchhhccccCCCCcceeEEcCCCCC
Q 003158 213 LFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNL 249 (843)
Q Consensus 213 L~L~~N~l~~~~p~~~~~l~~l~~~~L~~L~l~~N~l 249 (843)
|++++|.++......+.......-++|+.||+.+|.+
T Consensus 283 l~l~~N~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (319)
T cd00116 283 LDLRGNKFGEEGAQLLAESLLEPGNELESLWVKDDSF 319 (319)
T ss_pred EECCCCCCcHHHHHHHHHHHhhcCCchhhcccCCCCC
Confidence 9999999997655555554444446788999998864
No 452
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.60 E-value=7e-15 Score=146.87 Aligned_cols=136 Identities=23% Similarity=0.207 Sum_probs=98.0
Q ss_pred CCcccccCCeeEEEEEeCCCcEEEEEEeccCChhh--HHH----------------------HHHHHHHHHhccCCc--c
Q 003158 516 STQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQG--EKE----------------------FLTEIQFLSRLHHRN--L 569 (843)
Q Consensus 516 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~--~~~----------------------~~~E~~~l~~l~h~n--I 569 (843)
.+.||+|+||+||+|...+++.||||++....... ... ...|.+.+..+.+.. +
T Consensus 2 ~~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~ 81 (187)
T cd05119 2 GGPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPV 81 (187)
T ss_pred CcccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCC
Confidence 46799999999999998889999999887532211 111 134566666664433 3
Q ss_pred cceeeeeecCCcEEEEEecCCCCCHHHH-HhhcCCCCcchhHHHHHHHHHHHHHHHHhc-CCCCCEEeccCCCCcEEEcC
Q 003158 570 VSLVGYCDEEGEQMLVYEFMSNGTLRDQ-LSAKSKEPLGFAMRLSIALGSSRGILYLHT-EADPPVFHRDIKASNILLDH 647 (843)
Q Consensus 570 v~l~~~~~~~~~~~lV~e~~~~gsL~~~-l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~-~~~~~iiH~Dlkp~NILl~~ 647 (843)
.+.+++ ...++||||++++++... +.... .. .....++.+++.++.++|. .+ |+||||||+||+++
T Consensus 82 ~~~~~~----~~~~lv~e~~~g~~~~~~~l~~~~---~~-~~~~~~~~~~~~~l~~lh~~~~---ivH~Dl~p~Nili~- 149 (187)
T cd05119 82 PKPIDL----NRHVLVMEFIGGDGIPAPRLKDVR---LL-EDPEELYDQILELMRKLYREAG---LVHGDLSEYNILVD- 149 (187)
T ss_pred CceEec----CCCEEEEEEeCCCCccChhhhhhh---hc-ccHHHHHHHHHHHHHHHhhccC---cCcCCCChhhEEEE-
Confidence 444433 246899999998543221 11110 11 5577899999999999999 87 99999999999999
Q ss_pred CCcEEEeeccccccCC
Q 003158 648 KFTAKVADFGLSRLAP 663 (843)
Q Consensus 648 ~~~~kl~DfGla~~~~ 663 (843)
++.++++|||.+....
T Consensus 150 ~~~~~liDfg~a~~~~ 165 (187)
T cd05119 150 DGKVYIIDVPQAVEID 165 (187)
T ss_pred CCcEEEEECccccccc
Confidence 8999999999997543
No 453
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.59 E-value=1e-14 Score=139.71 Aligned_cols=135 Identities=19% Similarity=0.163 Sum_probs=114.3
Q ss_pred CCCcccccCCeeEEEEEeCCCcEEEEEEeccCChhhHHHHHHHHHHHHhccC--CcccceeeeeecCCcEEEEEecCCCC
Q 003158 515 SSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHH--RNLVSLVGYCDEEGEQMLVYEFMSNG 592 (843)
Q Consensus 515 ~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h--~nIv~l~~~~~~~~~~~lV~e~~~~g 592 (843)
+.+.||+|.++.||++...+ ..+++|....... ...+.+|+.+++.++| .++.++++++...+..+++|||++++
T Consensus 2 ~~~~i~~g~~~~v~~~~~~~-~~~~iK~~~~~~~--~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g~ 78 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGTKD-EDYVLKINPSREK--GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEGE 78 (155)
T ss_pred cceecccccccceEEEEecC-CeEEEEecCCCCc--hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecCCe
Confidence 35779999999999999754 7899999875433 5678899999999977 58999999988888999999999887
Q ss_pred CHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeecccccc
Q 003158 593 TLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRL 661 (843)
Q Consensus 593 sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~ 661 (843)
.+..+ +......++.+++++++++|.....+++|+|++|+||++++.+.+++.|||.+..
T Consensus 79 ~~~~~---------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~ 138 (155)
T cd05120 79 TLDEV---------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGY 138 (155)
T ss_pred ecccC---------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccC
Confidence 77554 3455667889999999999986545599999999999999999999999998874
No 454
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.56 E-value=5e-16 Score=179.38 Aligned_cols=262 Identities=21% Similarity=0.251 Sum_probs=195.1
Q ss_pred cCCCCCCcccccCCeeEEEEEeC--CCcEEEEEEeccCC--hhhHHHHHHHHHHHHhcc-CCcccceeeeeecCCcEEEE
Q 003158 511 NNFNSSTQIGQGGYGKVYKGILP--DGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLH-HRNLVSLVGYCDEEGEQMLV 585 (843)
Q Consensus 511 ~~~~~~~~lg~G~~g~Vy~~~~~--~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~-h~nIv~l~~~~~~~~~~~lV 585 (843)
..|...+.||+|+|+.|-..... ....+|+|.+.... .........|..+-+.+. |+|++.+++...+.+..+++
T Consensus 20 ~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~~ 99 (601)
T KOG0590|consen 20 SQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLLS 99 (601)
T ss_pred ccccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCcccccc
Confidence 45677788999999999887753 35567777766433 222345556777777776 99999999999999999999
Q ss_pred EecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHh-cCCCCCEEeccCCCCcEEEcCCC-cEEEeeccccccCC
Q 003158 586 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLH-TEADPPVFHRDIKASNILLDHKF-TAKVADFGLSRLAP 663 (843)
Q Consensus 586 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH-~~~~~~iiH~Dlkp~NILl~~~~-~~kl~DfGla~~~~ 663 (843)
++|.+++++.+-+........+......+..|+..++.|+| ..+ +.|||+||+|.+++..+ ..+++|||+|..+.
T Consensus 100 ~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~~---~~h~~ikP~n~~l~~s~~~l~~~df~~At~~~ 176 (601)
T KOG0590|consen 100 LSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPENG---VTHRDIKPSNSLLDESGSALKIADFGLATAYR 176 (601)
T ss_pred cCcccccccccccccCCccCCCCcchhhhhhhhccCccccCcccc---cccCCCCCccchhccCCCcccCCCchhhcccc
Confidence 99999999999883222223555666779999999999999 888 99999999999999999 99999999998765
Q ss_pred C-CCCCCcccceeeeeecc-cCCccCchhcccC-CCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchh
Q 003158 664 V-PDIEGIVPAHVSTVVKG-TPGYLDPEYFLTH-KLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFS 740 (843)
Q Consensus 664 ~-~~~~~~~~~~~~~~~~g-t~~y~aPE~~~~~-~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~ 740 (843)
. .. .........| ++.|+|||...+. ...+..|+||.|+++.-+++|..|+........
T Consensus 177 ~~~g-----~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~------------- 238 (601)
T KOG0590|consen 177 NKNG-----AERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDG------------- 238 (601)
T ss_pred ccCC-----cceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCccccccccc-------------
Confidence 4 22 1233344567 9999999999884 456679999999999999999999864332100
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCCCCccCCCC
Q 003158 741 VIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKH 820 (843)
Q Consensus 741 ~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~sa~e~L~H 820 (843)
.....+..| .|.. ...+........+++.++++.+|..|.+.+++-.|
T Consensus 239 ---------------~~~~~~~~~------~~~~-----------~~~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~~d 286 (601)
T KOG0590|consen 239 ---------------RYSSWKSNK------GRFT-----------QLPWNSISDQAHDLLHKILKENPSNRLSIEELKLD 286 (601)
T ss_pred ---------------cceeecccc------cccc-----------cCccccCChhhhhcccccccCCchhcccccccccc
Confidence 000000000 0000 01122334556688999999999999999999999
Q ss_pred CcccC
Q 003158 821 PYVSS 825 (843)
Q Consensus 821 p~f~~ 825 (843)
||++.
T Consensus 287 ~~~~~ 291 (601)
T KOG0590|consen 287 NWLSS 291 (601)
T ss_pred ccccc
Confidence 99988
No 455
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.56 E-value=3.6e-14 Score=146.56 Aligned_cols=135 Identities=23% Similarity=0.286 Sum_probs=105.2
Q ss_pred CCccc-ccCCeeEEEEEeCCCcEEEEEEeccCCh-------------hhHHHHHHHHHHHHhccCCcc--cceeeeeecC
Q 003158 516 STQIG-QGGYGKVYKGILPDGTVVAVKRAQEGSL-------------QGEKEFLTEIQFLSRLHHRNL--VSLVGYCDEE 579 (843)
Q Consensus 516 ~~~lg-~G~~g~Vy~~~~~~~~~vavK~~~~~~~-------------~~~~~~~~E~~~l~~l~h~nI--v~l~~~~~~~ 579 (843)
...|| .|+.|+||.+... +..+|||++..... .....+.+|++++..++|++| ++.+++....
T Consensus 36 ~~~lg~~~g~gtv~~v~~~-~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~ 114 (239)
T PRK01723 36 ARVVGSAKGRGTTWFVQTP-GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVR 114 (239)
T ss_pred CceeecCCCCccEEEEEeC-CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeee
Confidence 35688 8999999999874 67889998753211 123567889999999998875 6677765332
Q ss_pred -Cc---EEEEEecCCC-CCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEe
Q 003158 580 -GE---QMLVYEFMSN-GTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVA 654 (843)
Q Consensus 580 -~~---~~lV~e~~~~-gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~ 654 (843)
.. .++|||++++ .+|.+++... +++.. .+.++++++.+||+.| |+||||||+|||++.++.++|+
T Consensus 115 ~~~~~~~~lV~e~l~G~~~L~~~l~~~---~l~~~----~~~~i~~~l~~lH~~G---I~HrDlkp~NILv~~~~~v~LI 184 (239)
T PRK01723 115 HGLFYRADILIERIEGARDLVALLQEA---PLSEE----QWQAIGQLIARFHDAG---VYHADLNAHNILLDPDGKFWLI 184 (239)
T ss_pred cCcceeeeEEEEecCCCCCHHHHHhcC---CCCHH----HHHHHHHHHHHHHHCC---CCCCCCCchhEEEcCCCCEEEE
Confidence 22 2599999997 6999988542 23332 3568999999999999 9999999999999999999999
Q ss_pred ecccccc
Q 003158 655 DFGLSRL 661 (843)
Q Consensus 655 DfGla~~ 661 (843)
|||.+..
T Consensus 185 Dfg~~~~ 191 (239)
T PRK01723 185 DFDRGEL 191 (239)
T ss_pred ECCCccc
Confidence 9998874
No 456
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.46 E-value=1.9e-15 Score=162.58 Aligned_cols=200 Identities=28% Similarity=0.440 Sum_probs=174.2
Q ss_pred EEEccCCcCCccCc-ccc-CCCCCCcEEEcccCcCCccCccccccCCCCCEEEccCCccccCCCcccCCCCCCceeeccC
Q 003158 21 LLLLNGNELTGSLP-EEL-GYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDN 98 (843)
Q Consensus 21 ~L~L~~n~l~~~~p-~~~-~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~ 98 (843)
+|.|++-++. ..| .++ -.|..-...||+.|++. .+|..+..+..|+.+.|..|.|. .+|..+.++..|+.|+|+.
T Consensus 54 ~l~Ls~rrlk-~fpr~a~~~~ltdt~~aDlsrNR~~-elp~~~~~f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~ 130 (722)
T KOG0532|consen 54 RLLLSGRRLK-EFPRGAASYDLTDTVFADLSRNRFS-ELPEEACAFVSLESLILYHNCIR-TIPEAICNLEALTFLDLSS 130 (722)
T ss_pred ccccccchhh-cCCCccccccccchhhhhccccccc-cCchHHHHHHHHHHHHHHhccce-ecchhhhhhhHHHHhhhcc
Confidence 4666666666 333 222 24566678999999999 88999999999999999999999 8899999999999999999
Q ss_pred CCCCCCCCcccCCCCCCcEEEcCCCCCCCCCCCccccCCCCCcEEEcCCCCCCCCCCCCCCCCCCCEEEcccCcCCCCCC
Q 003158 99 NNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIP 178 (843)
Q Consensus 99 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~p 178 (843)
|+++ .+|..++.|+ |+.|.+++|++. .+|..++.+..|..||.+.|.+..+++.++.+.+|+.|.+..|.+. .+|
T Consensus 131 NqlS-~lp~~lC~lp-Lkvli~sNNkl~--~lp~~ig~~~tl~~ld~s~nei~slpsql~~l~slr~l~vrRn~l~-~lp 205 (722)
T KOG0532|consen 131 NQLS-HLPDGLCDLP-LKVLIVSNNKLT--SLPEEIGLLPTLAHLDVSKNEIQSLPSQLGYLTSLRDLNVRRNHLE-DLP 205 (722)
T ss_pred chhh-cCChhhhcCc-ceeEEEecCccc--cCCcccccchhHHHhhhhhhhhhhchHHhhhHHHHHHHHHhhhhhh-hCC
Confidence 9999 7888888774 999999999996 6899999999999999999999999999999999999999999998 777
Q ss_pred CCCCCcCcCEEEccCCcCCCCCCcccCCCCCCcEEeCcCccCCCCCCchhhc
Q 003158 179 PGRLSLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQ 230 (843)
Q Consensus 179 ~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 230 (843)
.......|..||+|+|+++ .+|-.|..|+.|++|-|.+|.|+ .-|..++.
T Consensus 206 ~El~~LpLi~lDfScNkis-~iPv~fr~m~~Lq~l~LenNPLq-SPPAqIC~ 255 (722)
T KOG0532|consen 206 EELCSLPLIRLDFSCNKIS-YLPVDFRKMRHLQVLQLENNPLQ-SPPAQICE 255 (722)
T ss_pred HHHhCCceeeeecccCcee-ecchhhhhhhhheeeeeccCCCC-CChHHHHh
Confidence 7777789999999999999 89999999999999999999998 55665543
No 457
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.44 E-value=3.3e-13 Score=136.46 Aligned_cols=154 Identities=25% Similarity=0.390 Sum_probs=115.3
Q ss_pred HHHhccCCcccceeeeeecCC-----cEEEEEecCCCCCHHHHHhhc--CCCCcchhHHHHHHHHHHHHHHHHhcCCCCC
Q 003158 560 FLSRLHHRNLVSLVGYCDEEG-----EQMLVYEFMSNGTLRDQLSAK--SKEPLGFAMRLSIALGSSRGILYLHTEADPP 632 (843)
Q Consensus 560 ~l~~l~h~nIv~l~~~~~~~~-----~~~lV~e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ 632 (843)
-+-.+.|.|||+++.|+.+.+ ...++.|||..|++..+|++. ....+....-.+|+.||..||.|||+. .|+
T Consensus 120 nllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~-~Pp 198 (458)
T KOG1266|consen 120 NLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSC-DPP 198 (458)
T ss_pred HHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhcc-CCc
Confidence 344557999999999986543 568999999999999999763 334567777788999999999999985 699
Q ss_pred EEeccCCCCcEEEcCCCcEEEeeccccccCCCCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHH
Q 003158 633 VFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLEL 712 (843)
Q Consensus 633 iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~el 712 (843)
|+|+++..+-|++..+|-+|++----...- ..... ..........+-++|.|||+-.....+.++|||+||+...||
T Consensus 199 iihgnlTc~tifiq~ngLIkig~~ap~s~h--~s~~~-~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlem 275 (458)
T KOG1266|consen 199 IIHGNLTCDTIFIQHNGLIKIGSVAPDSTH--PSVNS-TREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEM 275 (458)
T ss_pred cccCCcchhheeecCCceEEecccCccccc--hhhhh-hhHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHHH
Confidence 999999999999999998888632111100 00000 000111223467899999998877888899999999999999
Q ss_pred HhCCC
Q 003158 713 LTGMQ 717 (843)
Q Consensus 713 ltg~~ 717 (843)
.-+..
T Consensus 276 ailEi 280 (458)
T KOG1266|consen 276 AILEI 280 (458)
T ss_pred HHhee
Confidence 87643
No 458
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.42 E-value=8.2e-13 Score=148.31 Aligned_cols=141 Identities=23% Similarity=0.247 Sum_probs=100.9
Q ss_pred CCcccccCCeeEEEEEeCCCcEEEEEEeccCChhh----------------------------------------HHHHH
Q 003158 516 STQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQG----------------------------------------EKEFL 555 (843)
Q Consensus 516 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~----------------------------------------~~~~~ 555 (843)
.+.||.|++|.||+|++++|+.||||+........ +-+|.
T Consensus 122 ~~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~ 201 (437)
T TIGR01982 122 EKPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLR 201 (437)
T ss_pred CcceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHH
Confidence 36799999999999999999999999986532111 01244
Q ss_pred HHHHHHHhcc----CCcccceeeee-ecCCcEEEEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHH-HHHHHhcCC
Q 003158 556 TEIQFLSRLH----HRNLVSLVGYC-DEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSR-GILYLHTEA 629 (843)
Q Consensus 556 ~E~~~l~~l~----h~nIv~l~~~~-~~~~~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~-aL~yLH~~~ 629 (843)
+|++.+.+++ |.+-+.+-.++ ...+..+|||||++|++|.++...... .. .+..++..+++ .+..+|..|
T Consensus 202 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~~-~~---~~~~ia~~~~~~~l~ql~~~g 277 (437)
T TIGR01982 202 REAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDEA-GL---DRKALAENLARSFLNQVLRDG 277 (437)
T ss_pred HHHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHhc-CC---CHHHHHHHHHHHHHHHHHhCC
Confidence 5565555552 22223322222 334567999999999999987653211 11 24456666666 478899988
Q ss_pred CCCEEeccCCCCcEEEcCCCcEEEeeccccccCC
Q 003158 630 DPPVFHRDIKASNILLDHKFTAKVADFGLSRLAP 663 (843)
Q Consensus 630 ~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~ 663 (843)
++|+|++|.||+++++++++++|||++..+.
T Consensus 278 ---~~H~D~hPgNilv~~~g~i~liDfG~~~~l~ 308 (437)
T TIGR01982 278 ---FFHADLHPGNIFVLKDGKIIALDFGIVGRLS 308 (437)
T ss_pred ---ceeCCCCcccEEECCCCcEEEEeCCCeeECC
Confidence 9999999999999999999999999987654
No 459
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.33 E-value=1.4e-12 Score=146.56 Aligned_cols=170 Identities=29% Similarity=0.463 Sum_probs=74.5
Q ss_pred EEcccCcCCccCccccccCCCCCEEEccCCccccCCCcccCCCC-CCceeeccCCCCCCCCCcccCCCCCCcEEEcCCCC
Q 003158 46 IQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLP-SLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNN 124 (843)
Q Consensus 46 L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~-~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 124 (843)
|+++.|.+. .....+..++.++.|++.+|.++ .++.....+. +|+.|++++|++. .+|..+..+++|+.|++++|+
T Consensus 98 l~~~~~~~~-~~~~~~~~~~~l~~L~l~~n~i~-~i~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~N~ 174 (394)
T COG4886 98 LDLNLNRLR-SNISELLELTNLTSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSFND 174 (394)
T ss_pred eeccccccc-cCchhhhcccceeEEecCCcccc-cCccccccchhhcccccccccchh-hhhhhhhccccccccccCCch
Confidence 444444443 11222333344455555555544 3333333332 4555555555544 333344444555555555555
Q ss_pred CCCCCCCccccCCCCCcEEEcCCCCCCCCCCCCCCCCCCCEEEcccCcCCCCCCCCCCCcCcCEEEccCCcCCCCCCccc
Q 003158 125 FEGTTIPASYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLSLNITTIKLSNNKLTGTIPSNF 204 (843)
Q Consensus 125 l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~Ls~N~l~~~~p~~~ 204 (843)
+. .+|...+.+++|+.|++++|+++.+++.......|+.|.+++|.+...+.......++..|.+++|++. ..+..+
T Consensus 175 l~--~l~~~~~~~~~L~~L~ls~N~i~~l~~~~~~~~~L~~l~~~~N~~~~~~~~~~~~~~l~~l~l~~n~~~-~~~~~~ 251 (394)
T COG4886 175 LS--DLPKLLSNLSNLNNLDLSGNKISDLPPEIELLSALEELDLSNNSIIELLSSLSNLKNLSGLELSNNKLE-DLPESI 251 (394)
T ss_pred hh--hhhhhhhhhhhhhheeccCCccccCchhhhhhhhhhhhhhcCCcceecchhhhhcccccccccCCceee-eccchh
Confidence 43 233433344455555555555554444333334455555555532212221222224444444555444 224444
Q ss_pred CCCCCCcEEeCcCccCC
Q 003158 205 SGLPRLQRLFIANNSLS 221 (843)
Q Consensus 205 ~~l~~L~~L~L~~N~l~ 221 (843)
..+++|++|++++|.++
T Consensus 252 ~~l~~l~~L~~s~n~i~ 268 (394)
T COG4886 252 GNLSNLETLDLSNNQIS 268 (394)
T ss_pred ccccccceecccccccc
Confidence 55555555555555555
No 460
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=99.33 E-value=8.3e-12 Score=138.63 Aligned_cols=166 Identities=19% Similarity=0.196 Sum_probs=129.0
Q ss_pred eCCCcEEEEEEeccCChhhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEEecCCCCCHHHHHhhcCCCCcchhHH
Q 003158 532 LPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMR 611 (843)
Q Consensus 532 ~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~ 611 (843)
..++.+|.|...+...........+-++.|+.++||||+++++.+..++..|||+|-+. .|..++.+.+ ....
T Consensus 34 k~~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV~--Pl~~~lk~l~-----~~~v 106 (690)
T KOG1243|consen 34 KADGGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERVR--PLETVLKELG-----KEEV 106 (690)
T ss_pred eccCCceEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeeccc--cHHHHHHHhH-----HHHH
Confidence 44788899988876544344567788999999999999999999999999999999984 7888886643 5566
Q ss_pred HHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCCCCcccceeeeeecccCCccCchhc
Q 003158 612 LSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYF 691 (843)
Q Consensus 612 ~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 691 (843)
...+.||++||.+||..++ ++|++|.-+-|+|+..|..||++|.++........ ......---.|..|+.+
T Consensus 107 ~~Gl~qIl~AL~FL~~d~~--lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~-------~~~~~~~~~s~~~P~~~ 177 (690)
T KOG1243|consen 107 CLGLFQILAALSFLNDDCN--LVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNA-------PAKSLYLIESFDDPEEI 177 (690)
T ss_pred HHHHHHHHHHHHHHhccCC--eeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCc-------ccccchhhhcccChhhc
Confidence 6788999999999997764 99999999999999999999999998865432110 00111122346677765
Q ss_pred ccCCCCchhhhHHHHHHHHHHHhC
Q 003158 692 LTHKLTDKSDVYSLGVVFLELLTG 715 (843)
Q Consensus 692 ~~~~~~~~sDvwS~G~~l~elltg 715 (843)
.... -..|.|.|||+++|++.|
T Consensus 178 ~~s~--~s~D~~~Lg~li~el~ng 199 (690)
T KOG1243|consen 178 DPSE--WSIDSWGLGCLIEELFNG 199 (690)
T ss_pred Cccc--cchhhhhHHHHHHHHhCc
Confidence 4333 346999999999999998
No 461
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.31 E-value=8.1e-12 Score=141.66 Aligned_cols=142 Identities=20% Similarity=0.204 Sum_probs=93.5
Q ss_pred cCCCCCCcccccCCeeEEEEEeCC-CcEEEEEEeccCChhh----------------------------------HH---
Q 003158 511 NNFNSSTQIGQGGYGKVYKGILPD-GTVVAVKRAQEGSLQG----------------------------------EK--- 552 (843)
Q Consensus 511 ~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~----------------------------------~~--- 552 (843)
..|+. +.||+|++|.||+|++++ |+.||||+........ .+
T Consensus 120 ~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~ 198 (537)
T PRK04750 120 DDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLH 198 (537)
T ss_pred HhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHH
Confidence 35666 789999999999999887 9999999987542110 11
Q ss_pred ---HHHHHHHHHHhcc----CCcccceeeeee-cCCcEEEEEecCCCCCHHHHH--hhcCC--CCcchhHHHHHHHHHHH
Q 003158 553 ---EFLTEIQFLSRLH----HRNLVSLVGYCD-EEGEQMLVYEFMSNGTLRDQL--SAKSK--EPLGFAMRLSIALGSSR 620 (843)
Q Consensus 553 ---~~~~E~~~l~~l~----h~nIv~l~~~~~-~~~~~~lV~e~~~~gsL~~~l--~~~~~--~~l~~~~~~~i~~~ia~ 620 (843)
++.+|+..+.+++ +...+.+-.++. .....+|||||++|+.+.++- ...+. ..+.......++.|+
T Consensus 199 ~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Qi-- 276 (537)
T PRK04750 199 DELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQV-- 276 (537)
T ss_pred HhhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHHH--
Confidence 1333444333332 333333333332 245678999999999998753 22211 123333333344443
Q ss_pred HHHHHhcCCCCCEEeccCCCCcEEEcCCC----cEEEeeccccccCC
Q 003158 621 GILYLHTEADPPVFHRDIKASNILLDHKF----TAKVADFGLSRLAP 663 (843)
Q Consensus 621 aL~yLH~~~~~~iiH~Dlkp~NILl~~~~----~~kl~DfGla~~~~ 663 (843)
...| ++|+|+||.||+++.++ ++++.|||++..+.
T Consensus 277 -----f~~G---ffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~ 315 (537)
T PRK04750 277 -----FRDG---FFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLN 315 (537)
T ss_pred -----HhCC---eeeCCCChHHeEEecCCCCCCeEEEEecceEEECC
Confidence 4567 99999999999999988 99999999987664
No 462
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.30 E-value=1.2e-13 Score=148.97 Aligned_cols=193 Identities=25% Similarity=0.423 Sum_probs=132.9
Q ss_pred CCCCCEEEccCCcCCccCccccCCCCCCcEEEcccCcCCccCccccccCCCCCEEEccCCccccCCCcccCCCCCCceee
Q 003158 16 IKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHML 95 (843)
Q Consensus 16 l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~ 95 (843)
+.--...||+.|++. ++|..++.+..|+.|.|..|.+. .+|..+.++..|+.|||+.|+++ .+|..++.| -|+.|.
T Consensus 74 ltdt~~aDlsrNR~~-elp~~~~~f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~NqlS-~lp~~lC~l-pLkvli 149 (722)
T KOG0532|consen 74 LTDTVFADLSRNRFS-ELPEEACAFVSLESLILYHNCIR-TIPEAICNLEALTFLDLSSNQLS-HLPDGLCDL-PLKVLI 149 (722)
T ss_pred ccchhhhhccccccc-cCchHHHHHHHHHHHHHHhccce-ecchhhhhhhHHHHhhhccchhh-cCChhhhcC-cceeEE
Confidence 344556677777777 77777777777777777777777 67777777777777777777777 666666665 467777
Q ss_pred ccCCCCCCCCCcccCCCCCCcEEEcCCCCCCCCCCCccccCCCCCcEEEcCCCCCCCCCCCCCCCCCCCEEEcccCcCCC
Q 003158 96 LDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNG 175 (843)
Q Consensus 96 L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~ 175 (843)
+++|+++ .+|..++.++.|..|+.+.|.+. .+|..++++.+|+.|.+..|++..+++.+. .-.|..||+|.|+++
T Consensus 150 ~sNNkl~-~lp~~ig~~~tl~~ld~s~nei~--slpsql~~l~slr~l~vrRn~l~~lp~El~-~LpLi~lDfScNkis- 224 (722)
T KOG0532|consen 150 VSNNKLT-SLPEEIGLLPTLAHLDVSKNEIQ--SLPSQLGYLTSLRDLNVRRNHLEDLPEELC-SLPLIRLDFSCNKIS- 224 (722)
T ss_pred EecCccc-cCCcccccchhHHHhhhhhhhhh--hchHHhhhHHHHHHHHHhhhhhhhCCHHHh-CCceeeeecccCcee-
Confidence 7777777 66777777777777777777774 567777777777777777777777777666 335777777777777
Q ss_pred CCCCCCCCc-CcCEEEccCCcCCCCCCcccCC---CCCCcEEeCcCc
Q 003158 176 SIPPGRLSL-NITTIKLSNNKLTGTIPSNFSG---LPRLQRLFIANN 218 (843)
Q Consensus 176 ~~p~~~~~~-~L~~L~Ls~N~l~~~~p~~~~~---l~~L~~L~L~~N 218 (843)
.||..+... .|++|-|.+|.|. ..|..++- ..=.++|+..-+
T Consensus 225 ~iPv~fr~m~~Lq~l~LenNPLq-SPPAqIC~kGkVHIFKyL~~qA~ 270 (722)
T KOG0532|consen 225 YLPVDFRKMRHLQVLQLENNPLQ-SPPAQICEKGKVHIFKYLSTQAC 270 (722)
T ss_pred ecchhhhhhhhheeeeeccCCCC-CChHHHHhccceeeeeeecchhc
Confidence 677655544 6777777777776 44444432 222345555444
No 463
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.29 E-value=1.7e-12 Score=145.80 Aligned_cols=200 Identities=33% Similarity=0.452 Sum_probs=165.5
Q ss_pred EEEccCCcCCccCccccCCCCCCcEEEcccCcCCccCccccccCC-CCCEEEccCCccccCCCcccCCCCCCceeeccCC
Q 003158 21 LLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLN-KTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNN 99 (843)
Q Consensus 21 ~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~-~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N 99 (843)
.|++..|.+. .....+..++.++.|++.+|.++ .++.....++ +|+.|++++|.+. .+|..+..+++|+.|++++|
T Consensus 97 ~l~~~~~~~~-~~~~~~~~~~~l~~L~l~~n~i~-~i~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~N 173 (394)
T COG4886 97 SLDLNLNRLR-SNISELLELTNLTSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSFN 173 (394)
T ss_pred eeeccccccc-cCchhhhcccceeEEecCCcccc-cCccccccchhhcccccccccchh-hhhhhhhccccccccccCCc
Confidence 5888888886 45555667789999999999999 6777777775 9999999999998 66677899999999999999
Q ss_pred CCCCCCCcccCCCCCCcEEEcCCCCCCCCCCCccccCCCCCcEEEcCCCCCCCCCCCCCCCCCCCEEEcccCcCCCCCCC
Q 003158 100 NLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPP 179 (843)
Q Consensus 100 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~ 179 (843)
+++ .++.....++.|+.|++++|++. .+|.....+..|+.|.+++|.+...+..+..+.++..|.+.+|++. .++.
T Consensus 174 ~l~-~l~~~~~~~~~L~~L~ls~N~i~--~l~~~~~~~~~L~~l~~~~N~~~~~~~~~~~~~~l~~l~l~~n~~~-~~~~ 249 (394)
T COG4886 174 DLS-DLPKLLSNLSNLNNLDLSGNKIS--DLPPEIELLSALEELDLSNNSIIELLSSLSNLKNLSGLELSNNKLE-DLPE 249 (394)
T ss_pred hhh-hhhhhhhhhhhhhheeccCCccc--cCchhhhhhhhhhhhhhcCCcceecchhhhhcccccccccCCceee-eccc
Confidence 999 56666668899999999999997 5677776777799999999977667777888999999999999997 3333
Q ss_pred CCC-CcCcCEEEccCCcCCCCCCcccCCCCCCcEEeCcCccCCCCCCchhh
Q 003158 180 GRL-SLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIW 229 (843)
Q Consensus 180 ~~~-~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 229 (843)
... ..+++.|++++|+++.... +..+.+|+.|++++|.+....|....
T Consensus 250 ~~~~l~~l~~L~~s~n~i~~i~~--~~~~~~l~~L~~s~n~~~~~~~~~~~ 298 (394)
T COG4886 250 SIGNLSNLETLDLSNNQISSISS--LGSLTNLRELDLSGNSLSNALPLIAL 298 (394)
T ss_pred hhccccccceecccccccccccc--ccccCccCEEeccCccccccchhhhc
Confidence 333 3479999999999995444 99999999999999999977666543
No 464
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=99.29 E-value=4.8e-13 Score=133.29 Aligned_cols=221 Identities=19% Similarity=0.198 Sum_probs=139.9
Q ss_pred CCCCcEEEcccC--------cCCccCccccccCCCCCEEEccCCccccCCCcccCCCCCCceeeccCCCCCCCCCcccCC
Q 003158 40 LPKLDRIQIDQN--------YISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSE 111 (843)
Q Consensus 40 l~~L~~L~L~~N--------~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~ 111 (843)
..+|..|.+++. -+...+|-.+.-+++|+.+.+|.+.-..+ ......-|.|+++...+..++ ..|. +-.
T Consensus 181 ~~~l~~l~vs~~~~p~~~sni~~~~l~f~l~~f~~l~~~~~s~~~~~~i-~~~~~~kptl~t~~v~~s~~~-~~~~-l~p 257 (490)
T KOG1259|consen 181 CTQLVALVVTPVKDPIDRSNIIPNRLSFNLNAFRNLKTLKFSALSTENI-VDIELLKPTLQTICVHNTTIQ-DVPS-LLP 257 (490)
T ss_pred hhheeEEEecCCCCCCccccccccccccchHHhhhhheeeeeccchhhe-eceeecCchhheeeeeccccc-cccc-ccc
Confidence 345666665442 22233444455556677777666654422 222223366777776666555 2221 111
Q ss_pred CCCCcEEEcCCCCC-CCCCCCccccCCCCCcEEEcCCCCCCCCCCCCCCCCCCCEEEcccCcCCCCCCCCCCCcCcCEEE
Q 003158 112 LPKLLILQLDNNNF-EGTTIPASYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLSLNITTIK 190 (843)
Q Consensus 112 l~~L~~L~Ls~N~l-~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~ 190 (843)
...+..+.-+.-.. .| ..-.....+..|+.|||++|.|+.+.....-+++++.|++|+|.|. .+.......+|+.||
T Consensus 258 e~~~~D~~~~E~~t~~G-~~~~~~dTWq~LtelDLS~N~I~~iDESvKL~Pkir~L~lS~N~i~-~v~nLa~L~~L~~LD 335 (490)
T KOG1259|consen 258 ETILADPSGSEPSTSNG-SALVSADTWQELTELDLSGNLITQIDESVKLAPKLRRLILSQNRIR-TVQNLAELPQLQLLD 335 (490)
T ss_pred hhhhcCccCCCCCccCC-ceEEecchHhhhhhccccccchhhhhhhhhhccceeEEecccccee-eehhhhhcccceEee
Confidence 12222221111111 11 2223345566788888888888888777778888888888888887 555555555888888
Q ss_pred ccCCcCCCCCCcccCCCCCCcEEeCcCccCCCCCCchhhccccCCCCcceeEEcCCCCCCCCCCCC---cCCCCcEEEec
Q 003158 191 LSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGSF---NIPPNVTVRLR 267 (843)
Q Consensus 191 Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~l~~~~L~~L~l~~N~l~~~~~~~---~~~~l~~l~l~ 267 (843)
||+|.++ .+..+-..+-+.++|.|+.|.|+ .+.++.+| -+|..||+++|+|+.++... ++|-+..+.|.
T Consensus 336 LS~N~Ls-~~~Gwh~KLGNIKtL~La~N~iE-----~LSGL~KL--YSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~ 407 (490)
T KOG1259|consen 336 LSGNLLA-ECVGWHLKLGNIKTLKLAQNKIE-----TLSGLRKL--YSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLT 407 (490)
T ss_pred cccchhH-hhhhhHhhhcCEeeeehhhhhHh-----hhhhhHhh--hhheeccccccchhhHHHhcccccccHHHHHhhc
Confidence 8888887 44556667888899999999887 34444433 25678999999999987643 78999999999
Q ss_pred cCcccc
Q 003158 268 GNPFCL 273 (843)
Q Consensus 268 ~Np~~c 273 (843)
+||+.-
T Consensus 408 ~NPl~~ 413 (490)
T KOG1259|consen 408 GNPLAG 413 (490)
T ss_pred CCCccc
Confidence 999863
No 465
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.27 E-value=2e-11 Score=119.68 Aligned_cols=131 Identities=16% Similarity=0.115 Sum_probs=97.4
Q ss_pred CCcccccCCeeEEEEEeCCCcEEEEEEeccCChhhHHHHHHHHHHHHhccCCccc-ceeeeeecCCcEEEEEecCCCCCH
Q 003158 516 STQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLV-SLVGYCDEEGEQMLVYEFMSNGTL 594 (843)
Q Consensus 516 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv-~l~~~~~~~~~~~lV~e~~~~gsL 594 (843)
.+.++.|.++.||++... ++.|++|+...... ....+..|+++++.+.+.+++ +++.+.. +..++||||++|.++
T Consensus 3 ~~~l~~G~~~~vy~~~~~-~~~~~lK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~P~~~~~~~--~~~~lv~e~i~G~~l 78 (170)
T cd05151 3 ISPLKGGMTNKNYRVEVA-NKKYVVRIPGNGTE-LLINRENEAENSKLAAEAGIGPKLYYFDP--ETGVLITEFIEGSEL 78 (170)
T ss_pred eeecCCcccCceEEEEEC-CeEEEEEeCCCCcc-cccCHHHHHHHHHHHHHhCCCCceEEEeC--CCCeEEEEecCCCcc
Confidence 356899999999999874 77899999765332 223567899999988765554 4444432 345899999999887
Q ss_pred HHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCC--CCCEEeccCCCCcEEEcCCCcEEEeecccccc
Q 003158 595 RDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEA--DPPVFHRDIKASNILLDHKFTAKVADFGLSRL 661 (843)
Q Consensus 595 ~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~--~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~ 661 (843)
.+.- . ....++.+++++|+.||+.+ ...++|+|++|.||+++ ++.++++|||.+..
T Consensus 79 ~~~~-------~---~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~~ 136 (170)
T cd05151 79 LTED-------F---SDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAGM 136 (170)
T ss_pred cccc-------c---cCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEecccccC
Confidence 6430 1 11235678999999999987 23359999999999999 67899999998863
No 466
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.25 E-value=1.1e-11 Score=136.73 Aligned_cols=247 Identities=22% Similarity=0.236 Sum_probs=180.1
Q ss_pred cCCCCCCcccc--cCCeeEEEEEe---CCCcEEEEEEeccCCh--hhHHHHHHHHHHHHhc-cCCcccceeeeeecCCcE
Q 003158 511 NNFNSSTQIGQ--GGYGKVYKGIL---PDGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQ 582 (843)
Q Consensus 511 ~~~~~~~~lg~--G~~g~Vy~~~~---~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~ 582 (843)
..|.+...+|. |.+|.||.+.. .++..+|+|.-+.... ...++=.+|+...+.+ .|+|.++.+..+...+..
T Consensus 114 ~~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~~l 193 (524)
T KOG0601|consen 114 QRFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSGIL 193 (524)
T ss_pred hhcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccCCcc
Confidence 45667788999 99999999986 3688999997443222 2223345677766666 499999988899999999
Q ss_pred EEEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHH----HHHHHhcCCCCCEEeccCCCCcEEEcCC-CcEEEeecc
Q 003158 583 MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSR----GILYLHTEADPPVFHRDIKASNILLDHK-FTAKVADFG 657 (843)
Q Consensus 583 ~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~----aL~yLH~~~~~~iiH~Dlkp~NILl~~~-~~~kl~DfG 657 (843)
++-+|++ +.+|.++.+.... .++....+.+..+..+ ||.++|+.. ++|-|+||.||+..++ ...+++|||
T Consensus 194 fiqtE~~-~~sl~~~~~~~~~-~~p~~~l~~~~~~~~~~~~~al~~~hs~~---~~~~~~kp~~i~~~~~~~s~~~~df~ 268 (524)
T KOG0601|consen 194 FIQTELC-GESLQSYCHTPCN-FLPDNLLWNSLRDWLSRDVTALSHLHSNN---IVHDDLKPANIFTTSDWTSCKLTDFG 268 (524)
T ss_pred eeeeccc-cchhHHhhhcccc-cCCchhhhhHHhhhhhcccccccccCCCc---ccccccchhheecccccceeecCCcc
Confidence 9999999 5788888765432 3667778888888888 999999998 9999999999999999 889999999
Q ss_pred ccccCCCCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhccc
Q 003158 658 LSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSM 737 (843)
Q Consensus 658 la~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~ 737 (843)
+...+........ ........|...|++||...+ -++..+|+|++|.+..+..++..++..+.+..
T Consensus 269 ~v~~i~~~~~~~~--~~~~~r~~~~~~Y~~ke~~~~-l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~----------- 334 (524)
T KOG0601|consen 269 LVSKISDGNFSSV--FKVSKRPEGDCIYAAKELLNG-LATFASDIFSLGEVILEAILGSHLPSVGKNSS----------- 334 (524)
T ss_pred eeEEccCCccccc--eeeeecCCCCceEeChhhhcc-ccchHhhhcchhhhhHhhHhhcccccCCCCCC-----------
Confidence 9987765442221 111222357788999999754 46789999999999999999877765442100
Q ss_pred chhhccCCCCCCCHHH----HHHHHHHHHHhcccCCCCCCCHHHHH
Q 003158 738 MFSVIDGNMGSYPSEC----VEKFIKLALKCCQDETDARPSMSEVM 779 (843)
Q Consensus 738 ~~~~~~~~~~~~~~~~----~~~l~~l~~~c~~~~p~~RPs~~~vl 779 (843)
+.. +++. ..+.++ ..++...+..+++.++..|++.+.+.
T Consensus 335 W~~-~r~~--~ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~ 377 (524)
T KOG0601|consen 335 WSQ-LRQG--YIPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILT 377 (524)
T ss_pred ccc-cccc--cCchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHh
Confidence 000 0000 012222 23455578888999998888877664
No 467
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=99.23 E-value=9.6e-13 Score=138.09 Aligned_cols=89 Identities=18% Similarity=0.188 Sum_probs=54.1
Q ss_pred CcCEEEccCCcCCCCC-CcccCCCCCCcEEeCcCccCCCC-CCchhhccccCCCCcceeEEcCCCCCCCCCCCC---cCC
Q 003158 185 NITTIKLSNNKLTGTI-PSNFSGLPRLQRLFIANNSLSGS-IPSSIWQSRTLNATETFILDFQNNNLTNISGSF---NIP 259 (843)
Q Consensus 185 ~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~L~~N~l~~~-~p~~~~~l~~l~~~~L~~L~l~~N~l~~~~~~~---~~~ 259 (843)
.|+.|||++|++-... -...+.++.|+.|+++.+.+... .|+.=........++|++|+++.|++..++..- .++
T Consensus 247 ~L~~LdLs~N~li~~~~~~~~~~l~~L~~Lnls~tgi~si~~~d~~s~~kt~~f~kL~~L~i~~N~I~~w~sl~~l~~l~ 326 (505)
T KOG3207|consen 247 TLQELDLSNNNLIDFDQGYKVGTLPGLNQLNLSSTGIASIAEPDVESLDKTHTFPKLEYLNISENNIRDWRSLNHLRTLE 326 (505)
T ss_pred HHhhccccCCcccccccccccccccchhhhhccccCcchhcCCCccchhhhcccccceeeecccCccccccccchhhccc
Confidence 4555555555544221 13455677777777777777643 333322222335677888888888887776533 566
Q ss_pred CCcEEEeccCcccc
Q 003158 260 PNVTVRLRGNPFCL 273 (843)
Q Consensus 260 ~l~~l~l~~Np~~c 273 (843)
++..|.+.+|++.-
T Consensus 327 nlk~l~~~~n~ln~ 340 (505)
T KOG3207|consen 327 NLKHLRITLNYLNK 340 (505)
T ss_pred hhhhhhcccccccc
Confidence 77777777777653
No 468
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.23 E-value=6.5e-12 Score=145.00 Aligned_cols=272 Identities=18% Similarity=0.232 Sum_probs=183.6
Q ss_pred HHcCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCCh---hhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEE
Q 003158 509 ATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQML 584 (843)
Q Consensus 509 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~l 584 (843)
..+.+.+.+-+-+|.++.++.+.-. .|...+.|....... ..-+....+-.++-..+||.+++..-.+......+|
T Consensus 802 S~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~rsP~~L 881 (1205)
T KOG0606|consen 802 SPDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPCRSPLPL 881 (1205)
T ss_pred CCccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCCCCCCcch
Confidence 3456667778889999999887632 344444443332111 111222333333333456777766655666778899
Q ss_pred EEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCC
Q 003158 585 VYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPV 664 (843)
Q Consensus 585 V~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~ 664 (843)
|++|..+++|...++..+ ..+..........+.++++|||... +.|||++|.|.+...++..+++|||.......
T Consensus 882 ~~~~~~~~~~~Skl~~~~--~~saepaRs~i~~~vqs~e~L~s~~---r~h~~~~p~~~l~~~~gh~~l~~~~t~~~vg~ 956 (1205)
T KOG0606|consen 882 VGHYLNGGDLPSKLHNSG--CLSAEPARSPILERVQSLESLHSSL---RKHRDLKPDSLLIAYDGHRPLTDFGTLSKVGL 956 (1205)
T ss_pred hhHHhccCCchhhhhcCC--CcccccccchhHHHHhhhhccccch---hhcccccccchhhcccCCcccCcccccccccc
Confidence 999999999999997654 3555555666777889999999987 89999999999999999999999984432210
Q ss_pred C----CC-----------------CCcc---cceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCC
Q 003158 665 P----DI-----------------EGIV---PAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPIS 720 (843)
Q Consensus 665 ~----~~-----------------~~~~---~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~ 720 (843)
- +. .... .........||+.|.+||...+......+|+|++|++++|.++|..||.
T Consensus 957 ~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp~n 1036 (1205)
T KOG0606|consen 957 IPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPPFN 1036 (1205)
T ss_pred ccCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCCCC
Confidence 0 00 0000 0122345679999999999999999999999999999999999999997
Q ss_pred CCcchHHHHHHHhhcccchhhccCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccc
Q 003158 721 HGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFI 800 (843)
Q Consensus 721 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll 800 (843)
..... + .+.++.....+ +-....+....+.+++
T Consensus 1037 a~tpq-~---------~f~ni~~~~~~-------------------------------------~p~g~~~~s~~aq~~~ 1069 (1205)
T KOG0606|consen 1037 AETPQ-Q---------IFENILNRDIP-------------------------------------WPEGPEEGSYEAQDLI 1069 (1205)
T ss_pred Ccchh-h---------hhhccccCCCC-------------------------------------CCCCccccChhhhhhh
Confidence 54320 0 01111111100 0011122344556788
Q ss_pred cCCCCCCCCCCCCCc---cCCCCCcccCCCCCCcc
Q 003158 801 NSEHTSKEETPPSSS---SMLKHPYVSSDVSGSNL 832 (843)
Q Consensus 801 ~~~L~~dp~~R~sa~---e~L~Hp~f~~~~~~~~~ 832 (843)
..+++.+|.+|..|. +.-.||+|+...++...
T Consensus 1070 ~~ll~~~~~qr~~a~~~~e~k~~~~~~~~~~~~l~ 1104 (1205)
T KOG0606|consen 1070 NRLLTEEPTQRLGAKGAAEVKGHPFFQDVDWENLA 1104 (1205)
T ss_pred hhhhccCchhccCcccccccccCCccCCCCccccc
Confidence 888999999998888 88899999998886443
No 469
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.23 E-value=3.3e-12 Score=123.34 Aligned_cols=127 Identities=28% Similarity=0.363 Sum_probs=43.8
Q ss_pred CCCCCCcEEEcccCcCCccCccccc-cCCCCCEEEccCCccccCCCcccCCCCCCceeeccCCCCCCCCCccc-CCCCCC
Q 003158 38 GYLPKLDRIQIDQNYISGSLPKSFA-NLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPEL-SELPKL 115 (843)
Q Consensus 38 ~~l~~L~~L~L~~N~l~~~~~~~~~-~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~-~~l~~L 115 (843)
.+..++++|+|++|.|+ .+. .++ .+.+|+.|+|++|.|+.+ +.+..+++|++|++++|+|+.+ .+.+ ..+++|
T Consensus 16 ~n~~~~~~L~L~~n~I~-~Ie-~L~~~l~~L~~L~Ls~N~I~~l--~~l~~L~~L~~L~L~~N~I~~i-~~~l~~~lp~L 90 (175)
T PF14580_consen 16 NNPVKLRELNLRGNQIS-TIE-NLGATLDKLEVLDLSNNQITKL--EGLPGLPRLKTLDLSNNRISSI-SEGLDKNLPNL 90 (175)
T ss_dssp ----------------------S--TT-TT--EEE-TTS--S----TT----TT--EEE--SS---S--CHHHHHH-TT-
T ss_pred ccccccccccccccccc-ccc-chhhhhcCCCEEECCCCCCccc--cCccChhhhhhcccCCCCCCcc-ccchHHhCCcC
Confidence 34445666777777766 232 344 456677777777777643 2466677777777777777743 3333 346777
Q ss_pred cEEEcCCCCCCCCCCCccccCCCCCcEEEcCCCCCCCCCCC----CCCCCCCCEEEcc
Q 003158 116 LILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMPD----LSRIPNLGYLDLS 169 (843)
Q Consensus 116 ~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~----~~~l~~L~~L~Ls 169 (843)
+.|+|++|+|.....-..+..+++|+.|+|.+|.+...... +..+|+|+.||-.
T Consensus 91 ~~L~L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~~~~~YR~~vi~~lP~Lk~LD~~ 148 (175)
T PF14580_consen 91 QELYLSNNKISDLNELEPLSSLPKLRVLSLEGNPVCEKKNYRLFVIYKLPSLKVLDGQ 148 (175)
T ss_dssp -EEE-TTS---SCCCCGGGGG-TT--EEE-TT-GGGGSTTHHHHHHHH-TT-SEETTE
T ss_pred CEEECcCCcCCChHHhHHHHcCCCcceeeccCCcccchhhHHHHHHHHcChhheeCCE
Confidence 77777777776533334566677777777777777655432 5667777777643
No 470
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=99.22 E-value=4.1e-13 Score=137.35 Aligned_cols=241 Identities=19% Similarity=0.273 Sum_probs=144.2
Q ss_pred cccCCCCCCEEEccCCcCCcc----CccccCCCCCCcEEEcccCcCC---ccCccc-------cccCCCCCEEEccCCcc
Q 003158 12 EIGNIKSLELLLLNGNELTGS----LPEELGYLPKLDRIQIDQNYIS---GSLPKS-------FANLNKTRHFHMNNNSI 77 (843)
Q Consensus 12 ~i~~l~~L~~L~L~~n~l~~~----~p~~~~~l~~L~~L~L~~N~l~---~~~~~~-------~~~l~~L~~L~Ls~N~l 77 (843)
.+..+.+++.|+|++|.+... +...+.+.++|+..++++-.-. ..+|.. +..+++|+.|+||+|.+
T Consensus 25 ~~~~~~s~~~l~lsgnt~G~EAa~~i~~~L~~~~~L~~v~~sd~ftGR~~~Ei~e~L~~l~~aL~~~~~L~~ldLSDNA~ 104 (382)
T KOG1909|consen 25 ELEPMDSLTKLDLSGNTFGTEAARAIAKVLASKKELREVNLSDMFTGRLKDEIPEALKMLSKALLGCPKLQKLDLSDNAF 104 (382)
T ss_pred HhcccCceEEEeccCCchhHHHHHHHHHHHhhcccceeeehHhhhcCCcHHHHHHHHHHHHHHHhcCCceeEeecccccc
Confidence 345567888888888888733 4455667778888887764322 233433 34456888888888888
Q ss_pred ccCCCcc----cCCCCCCceeeccCCCCCCCCCcc-------------cCCCCCCcEEEcCCCCCCCC---CCCccccCC
Q 003158 78 SGQIPPE----LSRLPSLVHMLLDNNNLTGYLPPE-------------LSELPKLLILQLDNNNFEGT---TIPASYSNM 137 (843)
Q Consensus 78 ~~~~~~~----l~~l~~L~~L~L~~N~l~~~~~~~-------------~~~l~~L~~L~Ls~N~l~~~---~~~~~~~~l 137 (843)
....+.. +.++..|++|+|.||.+...-... .+.-+.|+++...+|++... .+...|...
T Consensus 105 G~~g~~~l~~ll~s~~~L~eL~L~N~Glg~~ag~~l~~al~~l~~~kk~~~~~~Lrv~i~~rNrlen~ga~~~A~~~~~~ 184 (382)
T KOG1909|consen 105 GPKGIRGLEELLSSCTDLEELYLNNCGLGPEAGGRLGRALFELAVNKKAASKPKLRVFICGRNRLENGGATALAEAFQSH 184 (382)
T ss_pred CccchHHHHHHHHhccCHHHHhhhcCCCChhHHHHHHHHHHHHHHHhccCCCcceEEEEeeccccccccHHHHHHHHHhc
Confidence 7554443 346778888888888876322222 23345666666666666431 112234555
Q ss_pred CCCcEEEcCCCCCCCCCC-----CCCCCCCCCEEEcccCcCCCCCCCCCCCcCcCEEEccCCcCCCCCCcccCCCCCCcE
Q 003158 138 SKLLKLSLRNCSLQGPMP-----DLSRIPNLGYLDLSSNQLNGSIPPGRLSLNITTIKLSNNKLTGTIPSNFSGLPRLQR 212 (843)
Q Consensus 138 ~~L~~L~L~~N~l~~~~~-----~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 212 (843)
+.|+.+.++.|.|..-.. .+..+++|+.|||.+|-++..... .+...+..+++|+.
T Consensus 185 ~~leevr~~qN~I~~eG~~al~eal~~~~~LevLdl~DNtft~egs~-------------------~LakaL~s~~~L~E 245 (382)
T KOG1909|consen 185 PTLEEVRLSQNGIRPEGVTALAEALEHCPHLEVLDLRDNTFTLEGSV-------------------ALAKALSSWPHLRE 245 (382)
T ss_pred cccceEEEecccccCchhHHHHHHHHhCCcceeeecccchhhhHHHH-------------------HHHHHhcccchhee
Confidence 566666666665542111 255556666666666655411110 23345666777777
Q ss_pred EeCcCccCCCCCCchhhccccCCCCcceeEEcCCCCCCCCCCC-----C-cCCCCcEEEeccCcc
Q 003158 213 LFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGS-----F-NIPPNVTVRLRGNPF 271 (843)
Q Consensus 213 L~L~~N~l~~~~p~~~~~l~~l~~~~L~~L~l~~N~l~~~~~~-----~-~~~~l~~l~l~~Np~ 271 (843)
|+++++.+....-.++..--+=..|+|++|.+.+|.++.=... . ..|.+..|+|+||.+
T Consensus 246 l~l~dcll~~~Ga~a~~~al~~~~p~L~vl~l~gNeIt~da~~~la~~~~ek~dL~kLnLngN~l 310 (382)
T KOG1909|consen 246 LNLGDCLLENEGAIAFVDALKESAPSLEVLELAGNEITRDAALALAACMAEKPDLEKLNLNGNRL 310 (382)
T ss_pred ecccccccccccHHHHHHHHhccCCCCceeccCcchhHHHHHHHHHHHHhcchhhHHhcCCcccc
Confidence 7777777776655555433222366777888888877753321 1 467788888888887
No 471
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=99.18 E-value=2.6e-12 Score=134.86 Aligned_cols=205 Identities=21% Similarity=0.267 Sum_probs=131.3
Q ss_pred CCCCCCEEEccCCcCCccCc--cccCCCCCCcEEEcccCcCCccC--ccccccCCCCCEEEccCCccccCCCccc-CCCC
Q 003158 15 NIKSLELLLLNGNELTGSLP--EELGYLPKLDRIQIDQNYISGSL--PKSFANLNKTRHFHMNNNSISGQIPPEL-SRLP 89 (843)
Q Consensus 15 ~l~~L~~L~L~~n~l~~~~p--~~~~~l~~L~~L~L~~N~l~~~~--~~~~~~l~~L~~L~Ls~N~l~~~~~~~l-~~l~ 89 (843)
++.+|+...|.++.+. ..+ .....|++++.|||++|-+.... -.....|++|+.|+|+.|++.....+.. ..++
T Consensus 119 n~kkL~~IsLdn~~V~-~~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~l~ 197 (505)
T KOG3207|consen 119 NLKKLREISLDNYRVE-DAGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLLLS 197 (505)
T ss_pred hHHhhhheeecCcccc-ccchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhhhh
Confidence 5677888888888777 333 35667888888888888777332 2445667888888888888763333222 2567
Q ss_pred CCceeeccCCCCCC-CCCcccCCCCCCcEEEcCCCCCCCCCCCccccCCCCCcEEEcCCCCCCCCCC--CCCCCCCCCEE
Q 003158 90 SLVHMLLDNNNLTG-YLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMP--DLSRIPNLGYL 166 (843)
Q Consensus 90 ~L~~L~L~~N~l~~-~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~--~~~~l~~L~~L 166 (843)
+|+.|.|+.|.|+- .+-..+..+|+|+.|+|..|.... ........+..|+.|||++|++-..+. ..+.++.|..|
T Consensus 198 ~lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~-~~~~~~~i~~~L~~LdLs~N~li~~~~~~~~~~l~~L~~L 276 (505)
T KOG3207|consen 198 HLKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIIL-IKATSTKILQTLQELDLSNNNLIDFDQGYKVGTLPGLNQL 276 (505)
T ss_pred hhheEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccc-eecchhhhhhHHhhccccCCcccccccccccccccchhhh
Confidence 78888888888872 122234556788888888885321 223345556778888888888776663 47778888888
Q ss_pred EcccCcCCC-CCCCC------CCCcCcCEEEccCCcCCC-CCCcccCCCCCCcEEeCcCccCC
Q 003158 167 DLSSNQLNG-SIPPG------RLSLNITTIKLSNNKLTG-TIPSNFSGLPRLQRLFIANNSLS 221 (843)
Q Consensus 167 ~Ls~N~l~~-~~p~~------~~~~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~ 221 (843)
+++.|.+.. .+|+. ....+|++|+++.|+|.. ..-..+..+++|+.|....|.|+
T Consensus 277 nls~tgi~si~~~d~~s~~kt~~f~kL~~L~i~~N~I~~w~sl~~l~~l~nlk~l~~~~n~ln 339 (505)
T KOG3207|consen 277 NLSSTGIASIAEPDVESLDKTHTFPKLEYLNISENNIRDWRSLNHLRTLENLKHLRITLNYLN 339 (505)
T ss_pred hccccCcchhcCCCccchhhhcccccceeeecccCccccccccchhhccchhhhhhccccccc
Confidence 888888763 12222 112367777777777742 11233445566666666666665
No 472
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=99.16 E-value=3.2e-12 Score=143.81 Aligned_cols=195 Identities=23% Similarity=0.297 Sum_probs=100.3
Q ss_pred CCCCCEEEccCCcCCccCccccCCCCCCcEEEcccCcCCccCccccccCCCCCEEEccCCccccCCCcccCCCCCCceee
Q 003158 16 IKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHML 95 (843)
Q Consensus 16 l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~ 95 (843)
+..++.+++..|.+. .+-..+..+++|+.|++.+|+|. .+...+..+++|+.|+|++|.|+.+. .+..++.|+.|+
T Consensus 71 l~~l~~l~l~~n~i~-~~~~~l~~~~~l~~l~l~~n~i~-~i~~~l~~~~~L~~L~ls~N~I~~i~--~l~~l~~L~~L~ 146 (414)
T KOG0531|consen 71 LTSLKELNLRQNLIA-KILNHLSKLKSLEALDLYDNKIE-KIENLLSSLVNLQVLDLSFNKITKLE--GLSTLTLLKELN 146 (414)
T ss_pred hHhHHhhccchhhhh-hhhcccccccceeeeeccccchh-hcccchhhhhcchheecccccccccc--chhhccchhhhe
Confidence 344555555555555 23334555566666666666665 23333555666666666666665442 244555566666
Q ss_pred ccCCCCCCCCCcccCCCCCCcEEEcCCCCCCCCCCCcc-ccCCCCCcEEEcCCCCCCCCCCCCCCCCCCCEEEcccCcCC
Q 003158 96 LDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPAS-YSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLN 174 (843)
Q Consensus 96 L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~-~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~Ls~N~l~ 174 (843)
+++|.|+.. ..+..++.|+.+++++|++.. +... ...+.+|+.+++.+|.+..+.. +..+..+..+++..|.++
T Consensus 147 l~~N~i~~~--~~~~~l~~L~~l~l~~n~i~~--ie~~~~~~~~~l~~l~l~~n~i~~i~~-~~~~~~l~~~~l~~n~i~ 221 (414)
T KOG0531|consen 147 LSGNLISDI--SGLESLKSLKLLDLSYNRIVD--IENDELSELISLEELDLGGNSIREIEG-LDLLKKLVLLSLLDNKIS 221 (414)
T ss_pred eccCcchhc--cCCccchhhhcccCCcchhhh--hhhhhhhhccchHHHhccCCchhcccc-hHHHHHHHHhhcccccce
Confidence 666666532 344445666666666666643 1221 3555566666666665553221 233333444455555555
Q ss_pred CCCCCCCCCcC--cCEEEccCCcCCCCCCcccCCCCCCcEEeCcCccCC
Q 003158 175 GSIPPGRLSLN--ITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLS 221 (843)
Q Consensus 175 ~~~p~~~~~~~--L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 221 (843)
.+........ |+.+++++|.+. ..+..+..+.++..|++.+|++.
T Consensus 222 -~~~~l~~~~~~~L~~l~l~~n~i~-~~~~~~~~~~~l~~l~~~~n~~~ 268 (414)
T KOG0531|consen 222 -KLEGLNELVMLHLRELYLSGNRIS-RSPEGLENLKNLPVLDLSSNRIS 268 (414)
T ss_pred -eccCcccchhHHHHHHhcccCccc-cccccccccccccccchhhcccc
Confidence 2222211112 556666666665 22244555556666666666655
No 473
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=99.15 E-value=4.9e-12 Score=126.22 Aligned_cols=224 Identities=21% Similarity=0.182 Sum_probs=116.6
Q ss_pred CCCCEEEccCC--------cCCccCccccCCCCCCcEEEcccCcCCccCccccccCCCCCEEEccCCccccCCCcccCCC
Q 003158 17 KSLELLLLNGN--------ELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRL 88 (843)
Q Consensus 17 ~~L~~L~L~~n--------~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l 88 (843)
.+|.+|..+.- -+...+|-.+.-+++|+.+.++.+.-. .+.+....-+.|+++...+..+... | .+-..
T Consensus 182 ~~l~~l~vs~~~~p~~~sni~~~~l~f~l~~f~~l~~~~~s~~~~~-~i~~~~~~kptl~t~~v~~s~~~~~-~-~l~pe 258 (490)
T KOG1259|consen 182 TQLVALVVTPVKDPIDRSNIIPNRLSFNLNAFRNLKTLKFSALSTE-NIVDIELLKPTLQTICVHNTTIQDV-P-SLLPE 258 (490)
T ss_pred hheeEEEecCCCCCCccccccccccccchHHhhhhheeeeeccchh-heeceeecCchhheeeeeccccccc-c-cccch
Confidence 56666666542 222344555555677777777777644 2222223335677777766555411 1 12222
Q ss_pred CCCceeeccCCC-CCCCCCcccCCCCCCcEEEcCCCCCCCCCCCccccCCCCCcEEEcCCCCCCCCCCCCCCCCCCCEEE
Q 003158 89 PSLVHMLLDNNN-LTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYLD 167 (843)
Q Consensus 89 ~~L~~L~L~~N~-l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~ 167 (843)
..+.....+.-. .+|..-..+.....|++||||+|.|+ .+..+..-++.++.|++++|.|..+.. +..+++|+.||
T Consensus 259 ~~~~D~~~~E~~t~~G~~~~~~dTWq~LtelDLS~N~I~--~iDESvKL~Pkir~L~lS~N~i~~v~n-La~L~~L~~LD 335 (490)
T KOG1259|consen 259 TILADPSGSEPSTSNGSALVSADTWQELTELDLSGNLIT--QIDESVKLAPKLRRLILSQNRIRTVQN-LAELPQLQLLD 335 (490)
T ss_pred hhhcCccCCCCCccCCceEEecchHhhhhhccccccchh--hhhhhhhhccceeEEeccccceeeehh-hhhcccceEee
Confidence 222222221111 11233333444456666666666664 355566666666666666666664433 66666666666
Q ss_pred cccCcCCCCCCCCCCC-cCcCEEEccCCcCCCCCCcccCCCCCCcEEeCcCccCCCCCCchhhccccCCCCcceeEEcCC
Q 003158 168 LSSNQLNGSIPPGRLS-LNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQN 246 (843)
Q Consensus 168 Ls~N~l~~~~p~~~~~-~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~l~~~~L~~L~l~~ 246 (843)
||+|.++ .+..+... .|+++|.|++|.|... ..+..+-+|..||+++|+|+.. +....+- ++|-|+.|.|.+
T Consensus 336 LS~N~Ls-~~~Gwh~KLGNIKtL~La~N~iE~L--SGL~KLYSLvnLDl~~N~Ie~l--deV~~IG--~LPCLE~l~L~~ 408 (490)
T KOG1259|consen 336 LSGNLLA-ECVGWHLKLGNIKTLKLAQNKIETL--SGLRKLYSLVNLDLSSNQIEEL--DEVNHIG--NLPCLETLRLTG 408 (490)
T ss_pred cccchhH-hhhhhHhhhcCEeeeehhhhhHhhh--hhhHhhhhheeccccccchhhH--HHhcccc--cccHHHHHhhcC
Confidence 6666666 33333222 2666666766666521 2344555666677777776521 1111111 133455666777
Q ss_pred CCCCCCC
Q 003158 247 NNLTNIS 253 (843)
Q Consensus 247 N~l~~~~ 253 (843)
|.|..++
T Consensus 409 NPl~~~v 415 (490)
T KOG1259|consen 409 NPLAGSV 415 (490)
T ss_pred CCccccc
Confidence 7666654
No 474
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.15 E-value=6.5e-10 Score=109.69 Aligned_cols=137 Identities=17% Similarity=0.085 Sum_probs=98.7
Q ss_pred CCcccccCCeeEEEEEeCC-------CcEEEEEEeccCCh----------------------hhHHH----HHHHHHHHH
Q 003158 516 STQIGQGGYGKVYKGILPD-------GTVVAVKRAQEGSL----------------------QGEKE----FLTEIQFLS 562 (843)
Q Consensus 516 ~~~lg~G~~g~Vy~~~~~~-------~~~vavK~~~~~~~----------------------~~~~~----~~~E~~~l~ 562 (843)
...||.|--+.||.|...+ +..+|||+.+.... ...+. ..+|++.|+
T Consensus 2 ~g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~ 81 (197)
T cd05146 2 NGCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLK 81 (197)
T ss_pred CCccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHH
Confidence 3578999999999998653 57999997652100 00122 348999999
Q ss_pred hccC--CcccceeeeeecCCcEEEEEecCCCCCHHH-HHhhcCCCCcchhHHHHHHHHHHHHHHHH-hcCCCCCEEeccC
Q 003158 563 RLHH--RNLVSLVGYCDEEGEQMLVYEFMSNGTLRD-QLSAKSKEPLGFAMRLSIALGSSRGILYL-HTEADPPVFHRDI 638 (843)
Q Consensus 563 ~l~h--~nIv~l~~~~~~~~~~~lV~e~~~~gsL~~-~l~~~~~~~l~~~~~~~i~~~ia~aL~yL-H~~~~~~iiH~Dl 638 (843)
++.. -++.+++++ ...+|||||+.+..+.. .++. ..++......+..+++.+|..+ |+.+ +||+||
T Consensus 82 rl~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lkd---~~~~~~~~~~i~~~i~~~l~~l~H~~g---lVHGDL 151 (197)
T cd05146 82 RMQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLKD---AKLNDEEMKNAYYQVLSMMKQLYKECN---LVHADL 151 (197)
T ss_pred HHHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhhc---cccCHHHHHHHHHHHHHHHHHHHHhCC---eecCCC
Confidence 9853 455666654 56789999997644422 2221 1234455667788999999999 7888 999999
Q ss_pred CCCcEEEcCCCcEEEeeccccccCC
Q 003158 639 KASNILLDHKFTAKVADFGLSRLAP 663 (843)
Q Consensus 639 kp~NILl~~~~~~kl~DfGla~~~~ 663 (843)
++.||+++ ++.+.|+|||.|....
T Consensus 152 s~~NIL~~-~~~v~iIDF~qav~~~ 175 (197)
T cd05146 152 SEYNMLWH-DGKVWFIDVSQSVEPT 175 (197)
T ss_pred CHHHEEEE-CCcEEEEECCCceeCC
Confidence 99999997 4689999999887654
No 475
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.15 E-value=4.2e-11 Score=132.22 Aligned_cols=246 Identities=20% Similarity=0.239 Sum_probs=175.4
Q ss_pred HHHHHcCCCCCCcccccCCeeEEEEEeC--CCcEEEEEEeccCChhhHHH--HHHHHHHHHhc-cCCcccceeeeeecCC
Q 003158 506 MALATNNFNSSTQIGQGGYGKVYKGILP--DGTVVAVKRAQEGSLQGEKE--FLTEIQFLSRL-HHRNLVSLVGYCDEEG 580 (843)
Q Consensus 506 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~--~~~~vavK~~~~~~~~~~~~--~~~E~~~l~~l-~h~nIv~l~~~~~~~~ 580 (843)
......+|..+..||.|.|+.|++...+ ++..+++|.+.........+ -..|+-+...+ .|.+++.....+....
T Consensus 260 ~s~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r 339 (524)
T KOG0601|consen 260 TSCKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLR 339 (524)
T ss_pred ceeecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCccccc
Confidence 3344568888999999999999998743 68899999877644333222 24566666665 5888998888887778
Q ss_pred cEEEEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCC-CcEEEeecccc
Q 003158 581 EQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHK-FTAKVADFGLS 659 (843)
Q Consensus 581 ~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~-~~~kl~DfGla 659 (843)
..++=-|||+++++...+ .....+++..++.+..|++.++.++|++. ++|+|+||+||++..+ +..+++|||++
T Consensus 340 ~~~ip~e~~~~~s~~l~~--~~~~~~d~~~~~~~~~q~~~~l~~i~s~~---~~~~d~~psni~i~~~~~~~~~~~~~~~ 414 (524)
T KOG0601|consen 340 QGYIPLEFCEGGSSSLRS--VTSQMLDEDPRLRLTAQILTALNVIHSKL---FVHLDVKPSNILISNDGFFSKLGDFGCW 414 (524)
T ss_pred cccCchhhhcCcchhhhh--HHHHhcCcchhhhhHHHHHhccccccchh---hhcccccccceeeccchhhhhccccccc
Confidence 888999999999987766 22345778888999999999999999998 9999999999999886 78999999998
Q ss_pred ccCCCCCCCCcccceeeeeecccCCcc--CchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhccc
Q 003158 660 RLAPVPDIEGIVPAHVSTVVKGTPGYL--DPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSM 737 (843)
Q Consensus 660 ~~~~~~~~~~~~~~~~~~~~~gt~~y~--aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~ 737 (843)
..+... .....+.-++. +++......+..+.|++|||..+.|.+++..--.... .
T Consensus 415 t~~~~~----------~~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~~-------------~ 471 (524)
T KOG0601|consen 415 TRLAFS----------SGVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSESGV-------------Q 471 (524)
T ss_pred ccccee----------cccccccccccccchhhccccccccccccccccccccccccCcccCcccc-------------c
Confidence 643211 11122333444 5555566788899999999999999999854322211 1
Q ss_pred chhhccCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 003158 738 MFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMR 780 (843)
Q Consensus 738 ~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~ 780 (843)
+..+..+..+..+... ..+..+...+...++..||.+.++..
T Consensus 472 ~~~i~~~~~p~~~~~~-~~~q~~~kv~~~~~~~~~~l~~~l~~ 513 (524)
T KOG0601|consen 472 SLTIRSGDTPNLPGLK-LQLQVLLKVMINPDRKRRPSAVELSL 513 (524)
T ss_pred ceeeecccccCCCchH-HhhhhhhhhhcCCccccchhhhhhcc
Confidence 1223333333333333 66666667777777777777766543
No 476
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.14 E-value=7.7e-10 Score=104.17 Aligned_cols=144 Identities=22% Similarity=0.234 Sum_probs=109.1
Q ss_pred CCCcccccCCeeEEEEEeCCCcEEEEEEe-ccCCh-------hhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEE
Q 003158 515 SSTQIGQGGYGKVYKGILPDGTVVAVKRA-QEGSL-------QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 586 (843)
Q Consensus 515 ~~~~lg~G~~g~Vy~~~~~~~~~vavK~~-~~~~~-------~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~ 586 (843)
....+-||+-+.|+++.+ .|+.+.||.- .+... -..++..+|++.+.+++--.|.-..-++.+...-.|+|
T Consensus 11 ~l~likQGAEArv~~~~~-~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~M 89 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSF-SGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIYM 89 (229)
T ss_pred cceeeeccceeeEeeecc-CCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEEE
Confidence 467889999999999998 5677777743 22111 12356788999999987556655555677777788999
Q ss_pred ecCCC-CCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCC---cEEEeeccccccC
Q 003158 587 EFMSN-GTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKF---TAKVADFGLSRLA 662 (843)
Q Consensus 587 e~~~~-gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~---~~kl~DfGla~~~ 662 (843)
||++| .++.+++......+.........+..|-+.+.-||..+ |||+||..+||++.+++ .+.++|||++...
T Consensus 90 E~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~nd---iiHGDLTTSNill~~~~~~~~~~lIdfgls~~s 166 (229)
T KOG3087|consen 90 EFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHDND---IIHGDLTTSNILLRSDGNQITPILIDFGLSSVS 166 (229)
T ss_pred EeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhhCC---eecccccccceEEecCCCcCceEEEeecchhcc
Confidence 99976 48888887654444444444678889999999999999 99999999999997665 4689999998653
No 477
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=99.12 E-value=3.9e-12 Score=143.17 Aligned_cols=237 Identities=24% Similarity=0.275 Sum_probs=169.3
Q ss_pred CCCEEEccCCcCCccCccccCCCCCCcEEEcccCcCCccCccccccCCCCCEEEccCCccccCCCcccCCCCCCceeecc
Q 003158 18 SLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLD 97 (843)
Q Consensus 18 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~ 97 (843)
.++.++...+.+...--. ...+..++.+++..|.|. .+-..+..+++|+.|++.+|.|..+ ...+..+++|+.|+|+
T Consensus 50 ~~~~~~~~~~~~~~~~~~-~~~l~~l~~l~l~~n~i~-~~~~~l~~~~~l~~l~l~~n~i~~i-~~~l~~~~~L~~L~ls 126 (414)
T KOG0531|consen 50 DLEEIDLIFNLDGSDEDL-VESLTSLKELNLRQNLIA-KILNHLSKLKSLEALDLYDNKIEKI-ENLLSSLVNLQVLDLS 126 (414)
T ss_pred hhhhhcchhccccchhhh-HHHhHhHHhhccchhhhh-hhhcccccccceeeeeccccchhhc-ccchhhhhcchheecc
Confidence 344555555544421111 145677888889999988 4455688889999999999999844 4447889999999999
Q ss_pred CCCCCCCCCcccCCCCCCcEEEcCCCCCCCCCCCccccCCCCCcEEEcCCCCCCCCCCC-CCCCCCCCEEEcccCcCCCC
Q 003158 98 NNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMPD-LSRIPNLGYLDLSSNQLNGS 176 (843)
Q Consensus 98 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~ 176 (843)
+|+|+.+ ..+..++.|+.|++++|.|+. ...+..+.+|+.+++++|.+..+... ...+.+|+.+++..|.+. .
T Consensus 127 ~N~I~~i--~~l~~l~~L~~L~l~~N~i~~---~~~~~~l~~L~~l~l~~n~i~~ie~~~~~~~~~l~~l~l~~n~i~-~ 200 (414)
T KOG0531|consen 127 FNKITKL--EGLSTLTLLKELNLSGNLISD---ISGLESLKSLKLLDLSYNRIVDIENDELSELISLEELDLGGNSIR-E 200 (414)
T ss_pred ccccccc--cchhhccchhhheeccCcchh---ccCCccchhhhcccCCcchhhhhhhhhhhhccchHHHhccCCchh-c
Confidence 9999965 457777889999999999964 34566688999999999999877664 578889999999999987 4
Q ss_pred CCCCCCCcCcCEEEccCCcCCCCCCcccCCCC--CCcEEeCcCccCCCCCCchhhccccCCCCcceeEEcCCCCCCCCCC
Q 003158 177 IPPGRLSLNITTIKLSNNKLTGTIPSNFSGLP--RLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISG 254 (843)
Q Consensus 177 ~p~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~--~L~~L~L~~N~l~~~~p~~~~~l~~l~~~~L~~L~l~~N~l~~~~~ 254 (843)
+........+..+++..|.++...+ +..+. .|+.+++++|++.- ++..+.. ...+..|++.+|++..+..
T Consensus 201 i~~~~~~~~l~~~~l~~n~i~~~~~--l~~~~~~~L~~l~l~~n~i~~-~~~~~~~-----~~~l~~l~~~~n~~~~~~~ 272 (414)
T KOG0531|consen 201 IEGLDLLKKLVLLSLLDNKISKLEG--LNELVMLHLRELYLSGNRISR-SPEGLEN-----LKNLPVLDLSSNRISNLEG 272 (414)
T ss_pred ccchHHHHHHHHhhcccccceeccC--cccchhHHHHHHhcccCcccc-ccccccc-----cccccccchhhcccccccc
Confidence 4444334466667889998884332 22233 38899999999983 3222322 2345578999999988876
Q ss_pred CCcCCCCcEEEeccCcc
Q 003158 255 SFNIPPNVTVRLRGNPF 271 (843)
Q Consensus 255 ~~~~~~l~~l~l~~Np~ 271 (843)
....+.+..+....|+.
T Consensus 273 ~~~~~~~~~~~~~~~~~ 289 (414)
T KOG0531|consen 273 LERLPKLSELWLNDNKL 289 (414)
T ss_pred ccccchHHHhccCcchh
Confidence 65666666666666654
No 478
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=99.09 E-value=6.5e-10 Score=114.12 Aligned_cols=142 Identities=23% Similarity=0.349 Sum_probs=110.2
Q ss_pred CcccccCCeeEEEEEeCCCcEEEEEEeccCCh-hhHHHHHHHHHHHHhccCC--cccceeeeeecC---CcEEEEEecCC
Q 003158 517 TQIGQGGYGKVYKGILPDGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHR--NLVSLVGYCDEE---GEQMLVYEFMS 590 (843)
Q Consensus 517 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~--nIv~l~~~~~~~---~~~~lV~e~~~ 590 (843)
+.|+.|.++.||++...+|+.+++|....... ....++..|+++++.+++. .+.+++.+.... +..++||||++
T Consensus 4 ~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i~ 83 (223)
T cd05154 4 RQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERVD 83 (223)
T ss_pred eecCCCccceEEEEEecCCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEeC
Confidence 56899999999999987778999999765332 1345788999999999763 457777777654 36789999999
Q ss_pred CCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCC-----------------------------------------
Q 003158 591 NGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEA----------------------------------------- 629 (843)
Q Consensus 591 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~----------------------------------------- 629 (843)
|.++.+.+.. ..++......++.+++++|.+||+..
T Consensus 84 G~~l~~~~~~---~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (223)
T cd05154 84 GRVLRDRLLR---PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAMERL 160 (223)
T ss_pred CEecCCCCCC---CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHHHHH
Confidence 9888776531 23566677778888888888888521
Q ss_pred ------------CCCEEeccCCCCcEEEcC--CCcEEEeecccccc
Q 003158 630 ------------DPPVFHRDIKASNILLDH--KFTAKVADFGLSRL 661 (843)
Q Consensus 630 ------------~~~iiH~Dlkp~NILl~~--~~~~kl~DfGla~~ 661 (843)
...++|+|+.+.||+++. ++.+.|+||+.+..
T Consensus 161 ~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~ 206 (223)
T cd05154 161 LRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATL 206 (223)
T ss_pred HHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence 245899999999999998 66789999998864
No 479
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.08 E-value=6e-11 Score=114.67 Aligned_cols=127 Identities=29% Similarity=0.413 Sum_probs=53.8
Q ss_pred ccCCCCCCEEEccCCcCCccCccccC-CCCCCcEEEcccCcCCccCccccccCCCCCEEEccCCccccCCCccc-CCCCC
Q 003158 13 IGNIKSLELLLLNGNELTGSLPEELG-YLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPEL-SRLPS 90 (843)
Q Consensus 13 i~~l~~L~~L~L~~n~l~~~~p~~~~-~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l-~~l~~ 90 (843)
+.+..+++.|+|++|+|+. + +.++ .+.+|+.|+|++|.|+.. . .+..+++|++|++++|+|+.+ ...+ ..+++
T Consensus 15 ~~n~~~~~~L~L~~n~I~~-I-e~L~~~l~~L~~L~Ls~N~I~~l-~-~l~~L~~L~~L~L~~N~I~~i-~~~l~~~lp~ 89 (175)
T PF14580_consen 15 YNNPVKLRELNLRGNQIST-I-ENLGATLDKLEVLDLSNNQITKL-E-GLPGLPRLKTLDLSNNRISSI-SEGLDKNLPN 89 (175)
T ss_dssp -----------------------S--TT-TT--EEE-TTS--S---T-T----TT--EEE--SS---S--CHHHHHH-TT
T ss_pred ccccccccccccccccccc-c-cchhhhhcCCCEEECCCCCCccc-c-CccChhhhhhcccCCCCCCcc-ccchHHhCCc
Confidence 3455679999999999994 3 3465 689999999999999943 3 588899999999999999954 4444 46899
Q ss_pred CceeeccCCCCCCCC-CcccCCCCCCcEEEcCCCCCCCCCCCc----cccCCCCCcEEEcC
Q 003158 91 LVHMLLDNNNLTGYL-PPELSELPKLLILQLDNNNFEGTTIPA----SYSNMSKLLKLSLR 146 (843)
Q Consensus 91 L~~L~L~~N~l~~~~-~~~~~~l~~L~~L~Ls~N~l~~~~~~~----~~~~l~~L~~L~L~ 146 (843)
|++|+|++|+|.... -..+..+++|+.|+|.+|.+.. .+. .+..+|+|+.||-.
T Consensus 90 L~~L~L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~~--~~~YR~~vi~~lP~Lk~LD~~ 148 (175)
T PF14580_consen 90 LQELYLSNNKISDLNELEPLSSLPKLRVLSLEGNPVCE--KKNYRLFVIYKLPSLKVLDGQ 148 (175)
T ss_dssp --EEE-TTS---SCCCCGGGGG-TT--EEE-TT-GGGG--STTHHHHHHHH-TT-SEETTE
T ss_pred CCEEECcCCcCCChHHhHHHHcCCCcceeeccCCcccc--hhhHHHHHHHHcChhheeCCE
Confidence 999999999998532 2567789999999999999964 232 46779999998754
No 480
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.06 E-value=2.3e-09 Score=101.75 Aligned_cols=132 Identities=22% Similarity=0.305 Sum_probs=101.4
Q ss_pred CcccccCCeeEEEEEeCCCcEEEEEEeccCChh--------hHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEEec
Q 003158 517 TQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQ--------GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 588 (843)
Q Consensus 517 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--------~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e~ 588 (843)
..+++|+-+.+|.+.+. |..+++|.-...... ...+-.+|++++.+++--.|...+-+..+.....|+|||
T Consensus 2 ~~i~~GAEa~i~~~~~~-g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me~ 80 (204)
T COG3642 2 DLIKQGAEAIIYLTDFL-GLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVMEY 80 (204)
T ss_pred chhhCCcceeEEeeecc-CcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEEE
Confidence 35789999999999774 444777754322211 124567899999998766666666677778888999999
Q ss_pred CCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccC
Q 003158 589 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLA 662 (843)
Q Consensus 589 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~ 662 (843)
++|-.|.+.+... ...++..+-.-+.-||..+ |||+||.++||++..+. +.++|||++.+-
T Consensus 81 I~G~~lkd~l~~~---------~~~~~r~vG~~vg~lH~~g---ivHGDLTtsNiIl~~~~-i~~IDfGLg~~s 141 (204)
T COG3642 81 IEGELLKDALEEA---------RPDLLREVGRLVGKLHKAG---IVHGDLTTSNIILSGGR-IYFIDFGLGEFS 141 (204)
T ss_pred eCChhHHHHHHhc---------chHHHHHHHHHHHHHHhcC---eecCCCccceEEEeCCc-EEEEECCccccc
Confidence 9999999888654 1345666667778899999 99999999999998765 999999999753
No 481
>PLN03150 hypothetical protein; Provisional
Probab=99.06 E-value=2.8e-10 Score=133.90 Aligned_cols=109 Identities=27% Similarity=0.494 Sum_probs=96.4
Q ss_pred CCcEEEcccCcCCccCccccccCCCCCEEEccCCccccCCCcccCCCCCCceeeccCCCCCCCCCcccCCCCCCcEEEcC
Q 003158 42 KLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLD 121 (843)
Q Consensus 42 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls 121 (843)
.++.|+|++|.+.+.+|..+..+++|+.|+|++|.|++.+|..++.+++|+.|+|++|++++.+|..++++++|+.|+|+
T Consensus 419 ~v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls 498 (623)
T PLN03150 419 FIDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLN 498 (623)
T ss_pred EEEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECc
Confidence 47889999999999999999999999999999999998999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCccccCC-CCCcEEEcCCCCCC
Q 003158 122 NNNFEGTTIPASYSNM-SKLLKLSLRNCSLQ 151 (843)
Q Consensus 122 ~N~l~~~~~~~~~~~l-~~L~~L~L~~N~l~ 151 (843)
+|++++ .+|..+..+ .++..+++.+|...
T Consensus 499 ~N~l~g-~iP~~l~~~~~~~~~l~~~~N~~l 528 (623)
T PLN03150 499 GNSLSG-RVPAALGGRLLHRASFNFTDNAGL 528 (623)
T ss_pred CCcccc-cCChHHhhccccCceEEecCCccc
Confidence 999987 678887664 46788999988644
No 482
>PLN03150 hypothetical protein; Provisional
Probab=99.04 E-value=4.5e-10 Score=132.18 Aligned_cols=112 Identities=29% Similarity=0.528 Sum_probs=100.7
Q ss_pred CCCEEEccCCccccCCCcccCCCCCCceeeccCCCCCCCCCcccCCCCCCcEEEcCCCCCCCCCCCccccCCCCCcEEEc
Q 003158 66 KTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSL 145 (843)
Q Consensus 66 ~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L 145 (843)
.++.|+|++|.+++.+|..+..+++|+.|+|++|++++.+|..+..+++|+.|+|++|++++ .+|..++++++|+.|+|
T Consensus 419 ~v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg-~iP~~l~~L~~L~~L~L 497 (623)
T PLN03150 419 FIDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNG-SIPESLGQLTSLRILNL 497 (623)
T ss_pred EEEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCC-CCchHHhcCCCCCEEEC
Confidence 47889999999999999999999999999999999999999999999999999999999997 78999999999999999
Q ss_pred CCCCCCCCCCC-CCC-CCCCCEEEcccCcCCCCCC
Q 003158 146 RNCSLQGPMPD-LSR-IPNLGYLDLSSNQLNGSIP 178 (843)
Q Consensus 146 ~~N~l~~~~~~-~~~-l~~L~~L~Ls~N~l~~~~p 178 (843)
++|++++..|. +.. +.++..+++.+|......|
T Consensus 498 s~N~l~g~iP~~l~~~~~~~~~l~~~~N~~lc~~p 532 (623)
T PLN03150 498 NGNSLSGRVPAALGGRLLHRASFNFTDNAGLCGIP 532 (623)
T ss_pred cCCcccccCChHHhhccccCceEEecCCccccCCC
Confidence 99999987774 554 3577899999998654333
No 483
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=98.94 E-value=3.9e-08 Score=106.36 Aligned_cols=167 Identities=19% Similarity=0.252 Sum_probs=128.4
Q ss_pred CeeEEEEEe-CCCcEEEEEEeccCChhhHHHHHHHHHHHHhccCCcccceeeeee----cCCcEEEEEecCCC-CCHHHH
Q 003158 524 YGKVYKGIL-PDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCD----EEGEQMLVYEFMSN-GTLRDQ 597 (843)
Q Consensus 524 ~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~----~~~~~~lV~e~~~~-gsL~~~ 597 (843)
..+.||+.. .||..|++|+++............-+++++++.|+|+|+|.+++. .+..+++||+|+++ ++|.++
T Consensus 289 ~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~d~ 368 (655)
T KOG3741|consen 289 SITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLYDL 368 (655)
T ss_pred cceeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHHHH
Confidence 357899985 489999999996544443333455688999999999999999885 34578999999875 577776
Q ss_pred Hhhc-------------CCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCC
Q 003158 598 LSAK-------------SKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPV 664 (843)
Q Consensus 598 l~~~-------------~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~ 664 (843)
-... .....++...|.++.|+..||.++|+.| ..-+-|.+++|+++.+.+++|+..|.......
T Consensus 369 ~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHssG---LAck~L~~~kIlv~G~~RIriS~C~i~Dvl~~ 445 (655)
T KOG3741|consen 369 YFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSSG---LACKTLDLKKILVTGKMRIRISGCGIMDVLQE 445 (655)
T ss_pred HccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhcC---ceeecccHhHeEeeCcceEEEecccceeeecC
Confidence 5321 1224678899999999999999999999 88899999999999999999998888765543
Q ss_pred CCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCC
Q 003158 665 PDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQ 717 (843)
Q Consensus 665 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~ 717 (843)
++ . |-+.+ -.+-|.-.||.++..|.||..
T Consensus 446 d~-------------------~--~~le~---~Qq~D~~~lG~ll~aLAt~~~ 474 (655)
T KOG3741|consen 446 DP-------------------T--EPLES---QQQNDLRDLGLLLLALATGTE 474 (655)
T ss_pred CC-------------------C--cchhH---HhhhhHHHHHHHHHHHhhccc
Confidence 21 0 11111 135688999999999999954
No 484
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.93 E-value=9.2e-12 Score=137.59 Aligned_cols=185 Identities=24% Similarity=0.325 Sum_probs=114.5
Q ss_pred ccccccCCCCCEEEccCCccccCCCcccCCC-CCCceeeccCCCCC----------CCCCcccCCCCCCcEEEcCCCCCC
Q 003158 58 PKSFANLNKTRHFHMNNNSISGQIPPELSRL-PSLVHMLLDNNNLT----------GYLPPELSELPKLLILQLDNNNFE 126 (843)
Q Consensus 58 ~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l-~~L~~L~L~~N~l~----------~~~~~~~~~l~~L~~L~Ls~N~l~ 126 (843)
|-.+..+++|++|.|.++.|... ..+..+ ..|+.|... |.+. |.+-+.+. ...|.+.+.+.|++.
T Consensus 102 pi~ifpF~sLr~LElrg~~L~~~--~GL~~lr~qLe~LIC~-~Sl~Al~~v~ascggd~~ns~~-Wn~L~~a~fsyN~L~ 177 (1096)
T KOG1859|consen 102 PISIFPFRSLRVLELRGCDLSTA--KGLQELRHQLEKLICH-NSLDALRHVFASCGGDISNSPV-WNKLATASFSYNRLV 177 (1096)
T ss_pred CceeccccceeeEEecCcchhhh--hhhHHHHHhhhhhhhh-ccHHHHHHHHHHhccccccchh-hhhHhhhhcchhhHH
Confidence 44566677777777777777631 112111 244444332 2222 11111111 236777788888885
Q ss_pred CCCCCccccCCCCCcEEEcCCCCCCCCCCCCCCCCCCCEEEcccCcCCCCCCCCCCC-cCcCEEEccCCcCCCCCCcccC
Q 003158 127 GTTIPASYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLS-LNITTIKLSNNKLTGTIPSNFS 205 (843)
Q Consensus 127 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-~~L~~L~Ls~N~l~~~~p~~~~ 205 (843)
....++.-++.|+.|+|++|+++... .+..|++|+.|||++|.++ .+|..... ..|+.|.|.+|.++.. ..+.
T Consensus 178 --~mD~SLqll~ale~LnLshNk~~~v~-~Lr~l~~LkhLDlsyN~L~-~vp~l~~~gc~L~~L~lrnN~l~tL--~gie 251 (1096)
T KOG1859|consen 178 --LMDESLQLLPALESLNLSHNKFTKVD-NLRRLPKLKHLDLSYNCLR-HVPQLSMVGCKLQLLNLRNNALTTL--RGIE 251 (1096)
T ss_pred --hHHHHHHHHHHhhhhccchhhhhhhH-HHHhcccccccccccchhc-cccccchhhhhheeeeecccHHHhh--hhHH
Confidence 45667788888888888888888665 6778888888888888888 66654322 3677778877777632 2344
Q ss_pred CCCCCcEEeCcCccCCCCCCchhhccccCCCCcceeEEcCCCCCCCCCCCCcCCCCcEEEeccCcccccCCcc
Q 003158 206 GLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGSFNIPPNVTVRLRGNPFCLNTNAE 278 (843)
Q Consensus 206 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~l~~~~L~~L~l~~N~l~~~~~~~~~~~l~~l~l~~Np~~c~~~~~ 278 (843)
+|.+|+.|||++|-|.+-. .+.+...+..|..|+|.|||+||....+
T Consensus 252 ~LksL~~LDlsyNll~~hs--------------------------eL~pLwsLs~L~~L~LeGNPl~c~p~hR 298 (1096)
T KOG1859|consen 252 NLKSLYGLDLSYNLLSEHS--------------------------ELEPLWSLSSLIVLWLEGNPLCCAPWHR 298 (1096)
T ss_pred hhhhhhccchhHhhhhcch--------------------------hhhHHHHHHHHHHHhhcCCccccCHHHH
Confidence 5566666666666665210 1111224566778899999999987543
No 485
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=98.88 E-value=2.1e-08 Score=98.76 Aligned_cols=126 Identities=25% Similarity=0.311 Sum_probs=84.2
Q ss_pred eEEEEEeCCCcEEEEEEeccCCh-------------h-------------hHHHHHHHHHHHHhccCC--cccceeeeee
Q 003158 526 KVYKGILPDGTVVAVKRAQEGSL-------------Q-------------GEKEFLTEIQFLSRLHHR--NLVSLVGYCD 577 (843)
Q Consensus 526 ~Vy~~~~~~~~~vavK~~~~~~~-------------~-------------~~~~~~~E~~~l~~l~h~--nIv~l~~~~~ 577 (843)
.||.|...+|..+|||+...... . ......+|.+.|.++..- ++.+++++.
T Consensus 1 ~Vy~~~~~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~- 79 (188)
T PF01163_consen 1 DVYHAIDPDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN- 79 (188)
T ss_dssp EEEEEEECTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE-
T ss_pred CEEEEECCCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe-
Confidence 48999999999999998653110 0 123567899999999765 456666553
Q ss_pred cCCcEEEEEecCC--CCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHH-HhcCCCCCEEeccCCCCcEEEcCCCcEEEe
Q 003158 578 EEGEQMLVYEFMS--NGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILY-LHTEADPPVFHRDIKASNILLDHKFTAKVA 654 (843)
Q Consensus 578 ~~~~~~lV~e~~~--~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~y-LH~~~~~~iiH~Dlkp~NILl~~~~~~kl~ 654 (843)
..+|||||++ |..+..+.... +.......++.+++..+.. +|..| |+|+|+.+.||+++++ .+.|+
T Consensus 80 ---~~~ivME~I~~~G~~~~~l~~~~----~~~~~~~~~~~~il~~~~~~~~~~g---ivHGDLs~~NIlv~~~-~~~iI 148 (188)
T PF01163_consen 80 ---RNVIVMEYIGEDGVPLPRLKDVD----LSPEEPKELLEEILEEIIKMLHKAG---IVHGDLSEYNILVDDG-KVYII 148 (188)
T ss_dssp ---TTEEEEE--EETTEEGGCHHHCG----GGGSTHHHHHHHHHHHHHHHHHCTT---EEESS-STTSEEEETT-CEEE-
T ss_pred ---CCEEEEEecCCCccchhhHHhcc----ccchhHHHHHHHHHHHHHHHHHhcC---ceecCCChhhEEeecc-eEEEE
Confidence 4579999998 65555543221 2234456677788875555 57888 9999999999999988 99999
Q ss_pred eccccccCC
Q 003158 655 DFGLSRLAP 663 (843)
Q Consensus 655 DfGla~~~~ 663 (843)
|||.+....
T Consensus 149 Df~qav~~~ 157 (188)
T PF01163_consen 149 DFGQAVDSS 157 (188)
T ss_dssp -GTTEEETT
T ss_pred ecCcceecC
Confidence 999886543
No 486
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=98.86 E-value=4.1e-08 Score=102.63 Aligned_cols=135 Identities=15% Similarity=0.159 Sum_probs=98.7
Q ss_pred CCeeEEEEEeCCCcEEEEEEeccCChhh-H----------HHHHHHHHHHHhccCCcc--cceeeeeec-----CCcEEE
Q 003158 523 GYGKVYKGILPDGTVVAVKRAQEGSLQG-E----------KEFLTEIQFLSRLHHRNL--VSLVGYCDE-----EGEQML 584 (843)
Q Consensus 523 ~~g~Vy~~~~~~~~~vavK~~~~~~~~~-~----------~~~~~E~~~l~~l~h~nI--v~l~~~~~~-----~~~~~l 584 (843)
....|.+..+ +|+.|.||......... . ..+.+|.+.+.++...+| .+.+++... ....+|
T Consensus 34 ~~rrvvr~~~-~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~~~~s~L 112 (268)
T PRK15123 34 EGRRTLRFEL-AGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPATRTSFI 112 (268)
T ss_pred CCceEEEEEE-CCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCccceeEE
Confidence 3344667665 67789999775433211 1 247889998888854444 344555532 235789
Q ss_pred EEecCCCC-CHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcC-------CCcEEEeec
Q 003158 585 VYEFMSNG-TLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDH-------KFTAKVADF 656 (843)
Q Consensus 585 V~e~~~~g-sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~-------~~~~kl~Df 656 (843)
|||++++. +|.+++......+.+...+..++.+++..+.-||..| |+|+|++++|||++. ++.+.++||
T Consensus 113 Vte~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~LH~~G---i~HgDL~~~NiLl~~~~~~~~~~~~~~LIDl 189 (268)
T PRK15123 113 ITEDLAPTISLEDYCADWATNPPDPRLKRMLIKRVATMVRDMHAAG---INHRDCYICHFLLHLPFPGREEDLKLSVIDL 189 (268)
T ss_pred EEeeCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCc---CccCCCChhhEEEeccccCCCCCceEEEEEC
Confidence 99999875 8999986432334556677789999999999999999 999999999999975 468999999
Q ss_pred ccccc
Q 003158 657 GLSRL 661 (843)
Q Consensus 657 Gla~~ 661 (843)
+.++.
T Consensus 190 ~r~~~ 194 (268)
T PRK15123 190 HRAQI 194 (268)
T ss_pred Ccccc
Confidence 98753
No 487
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=98.84 E-value=4.8e-11 Score=122.39 Aligned_cols=210 Identities=20% Similarity=0.266 Sum_probs=143.8
Q ss_pred ccccCCCCCCEEEccCCc---CCccCcc-------ccCCCCCCcEEEcccCcCCccCccc----cccCCCCCEEEccCCc
Q 003158 11 KEIGNIKSLELLLLNGNE---LTGSLPE-------ELGYLPKLDRIQIDQNYISGSLPKS----FANLNKTRHFHMNNNS 76 (843)
Q Consensus 11 ~~i~~l~~L~~L~L~~n~---l~~~~p~-------~~~~l~~L~~L~L~~N~l~~~~~~~----~~~l~~L~~L~Ls~N~ 76 (843)
..+.+.++|+..++++-- +...+|+ ++...++|++||||+|-|....+.. +.++..|++|.|.+|.
T Consensus 52 ~~L~~~~~L~~v~~sd~ftGR~~~Ei~e~L~~l~~aL~~~~~L~~ldLSDNA~G~~g~~~l~~ll~s~~~L~eL~L~N~G 131 (382)
T KOG1909|consen 52 KVLASKKELREVNLSDMFTGRLKDEIPEALKMLSKALLGCPKLQKLDLSDNAFGPKGIRGLEELLSSCTDLEELYLNNCG 131 (382)
T ss_pred HHHhhcccceeeehHhhhcCCcHHHHHHHHHHHHHHHhcCCceeEeeccccccCccchHHHHHHHHhccCHHHHhhhcCC
Confidence 456677889999988753 3334443 4556789999999999998544433 4567899999999999
Q ss_pred cccCCC-------------cccCCCCCCceeeccCCCCCCCC----CcccCCCCCCcEEEcCCCCCCCC---CCCccccC
Q 003158 77 ISGQIP-------------PELSRLPSLVHMLLDNNNLTGYL----PPELSELPKLLILQLDNNNFEGT---TIPASYSN 136 (843)
Q Consensus 77 l~~~~~-------------~~l~~l~~L~~L~L~~N~l~~~~----~~~~~~l~~L~~L~Ls~N~l~~~---~~~~~~~~ 136 (843)
+...-- .....-+.|+++..++|++..-. ...|...+.|+.+.++.|.|..- .+...|..
T Consensus 132 lg~~ag~~l~~al~~l~~~kk~~~~~~Lrv~i~~rNrlen~ga~~~A~~~~~~~~leevr~~qN~I~~eG~~al~eal~~ 211 (382)
T KOG1909|consen 132 LGPEAGGRLGRALFELAVNKKAASKPKLRVFICGRNRLENGGATALAEAFQSHPTLEEVRLSQNGIRPEGVTALAEALEH 211 (382)
T ss_pred CChhHHHHHHHHHHHHHHHhccCCCcceEEEEeeccccccccHHHHHHHHHhccccceEEEecccccCchhHHHHHHHHh
Confidence 873221 12345579999999999998432 33566779999999999998521 12345788
Q ss_pred CCCCcEEEcCCCCCCCCC-----CCCCCCCCCCEEEcccCcCCCCCCCCCC------CcCcCEEEccCCcCCC----CCC
Q 003158 137 MSKLLKLSLRNCSLQGPM-----PDLSRIPNLGYLDLSSNQLNGSIPPGRL------SLNITTIKLSNNKLTG----TIP 201 (843)
Q Consensus 137 l~~L~~L~L~~N~l~~~~-----~~~~~l~~L~~L~Ls~N~l~~~~p~~~~------~~~L~~L~Ls~N~l~~----~~p 201 (843)
+++|+.|||.+|-++... ..+..+++|+.|++++|.++......+. .++|+.|.|.+|.|+. .+.
T Consensus 212 ~~~LevLdl~DNtft~egs~~LakaL~s~~~L~El~l~dcll~~~Ga~a~~~al~~~~p~L~vl~l~gNeIt~da~~~la 291 (382)
T KOG1909|consen 212 CPHLEVLDLRDNTFTLEGSVALAKALSSWPHLRELNLGDCLLENEGAIAFVDALKESAPSLEVLELAGNEITRDAALALA 291 (382)
T ss_pred CCcceeeecccchhhhHHHHHHHHHhcccchheeecccccccccccHHHHHHHHhccCCCCceeccCcchhHHHHHHHHH
Confidence 999999999999997532 2377888999999999999743322111 1256666666666653 122
Q ss_pred cccCCCCCCcEEeCcCccC
Q 003158 202 SNFSGLPRLQRLFIANNSL 220 (843)
Q Consensus 202 ~~~~~l~~L~~L~L~~N~l 220 (843)
......+.|..|+|++|++
T Consensus 292 ~~~~ek~dL~kLnLngN~l 310 (382)
T KOG1909|consen 292 ACMAEKPDLEKLNLNGNRL 310 (382)
T ss_pred HHHhcchhhHHhcCCcccc
Confidence 2333455555555555555
No 488
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=98.74 E-value=1.3e-08 Score=122.41 Aligned_cols=229 Identities=23% Similarity=0.268 Sum_probs=117.7
Q ss_pred CCCEEEccCCc--CCccCccccCCCCCCcEEEcccCcCCccCccccccCCCCCEEEccCCccccCCCcccCCCCCCceee
Q 003158 18 SLELLLLNGNE--LTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHML 95 (843)
Q Consensus 18 ~L~~L~L~~n~--l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~ 95 (843)
.|++|-+.+|. +..+..+.|..++.|..|||++|.=-+.+|..+++|-+|+.|+|++..++ .+|..+.++..|.+|+
T Consensus 546 ~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~LryL~L~~t~I~-~LP~~l~~Lk~L~~Ln 624 (889)
T KOG4658|consen 546 KLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVHLRYLDLSDTGIS-HLPSGLGNLKKLIYLN 624 (889)
T ss_pred ccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCChHHhhhhhhhcccccCCCcc-ccchHHHHHHhhheec
Confidence 56666666664 44344444566666666666666555566666666666666666666666 6666666666666666
Q ss_pred ccCCCCCCCCCcccCCCCCCcEEEcCCCCCCC-CCCCccccCCCCCcEEEcCC--------------------------C
Q 003158 96 LDNNNLTGYLPPELSELPKLLILQLDNNNFEG-TTIPASYSNMSKLLKLSLRN--------------------------C 148 (843)
Q Consensus 96 L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-~~~~~~~~~l~~L~~L~L~~--------------------------N 148 (843)
+..+.-...++.....+++|++|.+..-.... ...-..+.++.+|+.|.... +
T Consensus 625 l~~~~~l~~~~~i~~~L~~Lr~L~l~~s~~~~~~~~l~el~~Le~L~~ls~~~~s~~~~e~l~~~~~L~~~~~~l~~~~~ 704 (889)
T KOG4658|consen 625 LEVTGRLESIPGILLELQSLRVLRLPRSALSNDKLLLKELENLEHLENLSITISSVLLLEDLLGMTRLRSLLQSLSIEGC 704 (889)
T ss_pred cccccccccccchhhhcccccEEEeeccccccchhhHHhhhcccchhhheeecchhHhHhhhhhhHHHHHHhHhhhhccc
Confidence 66665544445555556666666665433211 01112233344444333322 2
Q ss_pred CCCCCCCCCCCCCCCCEEEcccCcCCCCCCCCCCC-------cCcCEEEccCCcCCCCCCcccCCCCCCcEEeCcCccCC
Q 003158 149 SLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLS-------LNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLS 221 (843)
Q Consensus 149 ~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-------~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 221 (843)
........+..+.+|+.|.+.++.+.......... .++..+...++..- ..+...--.++|+.|++..+...
T Consensus 705 ~~~~~~~~~~~l~~L~~L~i~~~~~~e~~~~~~~~~~~~~~f~~l~~~~~~~~~~~-r~l~~~~f~~~L~~l~l~~~~~~ 783 (889)
T KOG4658|consen 705 SKRTLISSLGSLGNLEELSILDCGISEIVIEWEESLIVLLCFPNLSKVSILNCHML-RDLTWLLFAPHLTSLSLVSCRLL 783 (889)
T ss_pred ccceeecccccccCcceEEEEcCCCchhhcccccccchhhhHHHHHHHHhhccccc-cccchhhccCcccEEEEeccccc
Confidence 22223334666777777777777775221111000 01111111111111 22223334578888888877766
Q ss_pred CCCCchhhccccCCCCcceeEEcCCCCCCCCC
Q 003158 222 GSIPSSIWQSRTLNATETFILDFQNNNLTNIS 253 (843)
Q Consensus 222 ~~~p~~~~~l~~l~~~~L~~L~l~~N~l~~~~ 253 (843)
..+......+..+. .+-+..+.+..+.
T Consensus 784 e~~i~~~k~~~~l~-----~~i~~f~~~~~l~ 810 (889)
T KOG4658|consen 784 EDIIPKLKALLELK-----ELILPFNKLEGLR 810 (889)
T ss_pred ccCCCHHHHhhhcc-----cEEecccccccce
Confidence 55555444443332 2444555555543
No 489
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.72 E-value=8.4e-09 Score=81.95 Aligned_cols=60 Identities=32% Similarity=0.573 Sum_probs=32.4
Q ss_pred CCCEEEccCCcCCccCccccCCCCCCcEEEcccCcCCccCccccccCCCCCEEEccCCcc
Q 003158 18 SLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSI 77 (843)
Q Consensus 18 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l 77 (843)
+|++|+|++|+|+.+.+..|.++++|++|+|++|.++...+..|.++++|+.|++++|+|
T Consensus 2 ~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 2 NLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSSB
T ss_pred cCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCcC
Confidence 455555555555544445555555555555555555544445555555555555555543
No 490
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.70 E-value=9.2e-09 Score=81.72 Aligned_cols=59 Identities=31% Similarity=0.533 Sum_probs=29.9
Q ss_pred CCcEEEcccCcCCccCccccccCCCCCEEEccCCccccCCCcccCCCCCCceeeccCCC
Q 003158 42 KLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNN 100 (843)
Q Consensus 42 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~ 100 (843)
+|++|+|++|+|+...+..|.++++|++|++++|.|+.+.+..|.++++|++|++++|+
T Consensus 2 ~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~ 60 (61)
T PF13855_consen 2 NLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNN 60 (61)
T ss_dssp TESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSS
T ss_pred cCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCc
Confidence 44555555555554444445555555555555555554444445555555555555554
No 491
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=98.68 E-value=1.1e-06 Score=92.97 Aligned_cols=260 Identities=15% Similarity=0.153 Sum_probs=162.7
Q ss_pred CCCcccccCCeeEEEEEeCCCcEEEEEEeccCChhhHHHHHHHHHHHHhc-cCCcccceeeee------ecC-CcEEEEE
Q 003158 515 SSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRL-HHRNLVSLVGYC------DEE-GEQMLVY 586 (843)
Q Consensus 515 ~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~------~~~-~~~~lV~ 586 (843)
..+.||+|+-+.+|--- .-+..+.|++.........+ .+..|... .||-+-.=+.+= .+. ....+.|
T Consensus 15 ~gr~LgqGgea~ly~l~--e~~d~VAKIYh~Pppa~~aq---k~a~la~~p~~p~~~~rvaWPqa~L~G~~~~~~iGflm 89 (637)
T COG4248 15 PGRPLGQGGEADLYTLG--EVRDQVAKIYHAPPPAAQAQ---KVAELAATPDAPLLNYRVAWPQATLHGGRRGKVIGFLM 89 (637)
T ss_pred CCccccCCccceeeecc--hhhchhheeecCCCchHHHH---HHHHhccCCCCcchhhhhcccHHHhhCCCccceeEEec
Confidence 35779999999998532 22234567776543333322 22333333 465433312221 122 2367888
Q ss_pred ecCCCC-CHHHHHh----hcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeecccccc
Q 003158 587 EFMSNG-TLRDQLS----AKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRL 661 (843)
Q Consensus 587 e~~~~g-sL~~~l~----~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~ 661 (843)
+.+.+. .+.+++. ++.-...+|+..++.++.+|.+.+-||..| .+-+|+.++|+|+.+++.|.+.|=..-..
T Consensus 90 P~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~G---h~vGDVn~~~~lVsd~~~V~LVdsDsfqi 166 (637)
T COG4248 90 PKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEHG---HVVGDVNQNSFLVSDDSKVVLVDSDSFQI 166 (637)
T ss_pred ccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhcC---CcccccCccceeeecCceEEEEcccceee
Confidence 887654 2233332 123345789999999999999999999999 89999999999999999999988543322
Q ss_pred CCCCCCCCcccceeeeeecccCCccCchhcc-----cCCCCchhhhHHHHHHHHHHHhC-CCCCCCCcch---HHHHHHH
Q 003158 662 APVPDIEGIVPAHVSTVVKGTPGYLDPEYFL-----THKLTDKSDVYSLGVVFLELLTG-MQPISHGKNI---VREVNIA 732 (843)
Q Consensus 662 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDvwS~G~~l~elltg-~~pf~~~~~~---~~~~~~~ 732 (843)
.. .........|...|.+||.-. +..-+...|-|.+|+++++++.| ++||..-... ..-.+..
T Consensus 167 ~~--------ng~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~E~~ 238 (637)
T COG4248 167 NA--------NGTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPLETD 238 (637)
T ss_pred cc--------CCceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCCCCcchhh
Confidence 11 123345567889999999875 34556789999999999999995 9999742110 0000000
Q ss_pred hhcccchhhccCCC------CCCCH-HHHHHHHHHHHHhcccC--CCCCCCHHHHHHHHHHhhhhCC
Q 003158 733 YQSSMMFSVIDGNM------GSYPS-ECVEKFIKLALKCCQDE--TDARPSMSEVMRELESIWNMMP 790 (843)
Q Consensus 733 ~~~~~~~~~~~~~~------~~~~~-~~~~~l~~l~~~c~~~~--p~~RPs~~~vl~~L~~~~~~~~ 790 (843)
+....+....+... ...|- -.++.+..+..+|+... +.-||+++..+..|..+...+.
T Consensus 239 Ia~g~f~ya~~~~~g~~p~P~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~aW~aAl~al~~~L~ 305 (637)
T COG4248 239 IAHGRFAYASDQRRGLKPPPRSIPLSMLPPDVQALFQQAFTESGVATPRPTAKAWVAALDALRQQLK 305 (637)
T ss_pred hhcceeeechhccCCCCCCCCCCChhhcCHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHHHHhhh
Confidence 11111111111111 12222 23467888888998764 5689999999988887766543
No 492
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=98.67 E-value=1.9e-07 Score=94.24 Aligned_cols=138 Identities=22% Similarity=0.194 Sum_probs=98.6
Q ss_pred CCCCCCcccccCCeeEEEEEeCCCcEEEEEEeccCCh----------------------hhHHHHHHHHHHHHhccCC--
Q 003158 512 NFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSL----------------------QGEKEFLTEIQFLSRLHHR-- 567 (843)
Q Consensus 512 ~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~----------------------~~~~~~~~E~~~l~~l~h~-- 567 (843)
-..+.+.||-|--+.||.|..++|..+|||.=..... -.....++|.++|.++.-.
T Consensus 92 ve~iG~~IGvGKEsdVY~~~~~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~ 171 (304)
T COG0478 92 VEAIGTKIGVGKESDVYVAIDPKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGV 171 (304)
T ss_pred HHhhccccccCccceEEEEECCCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCC
Confidence 3455789999999999999999999999995221100 0123467899999998755
Q ss_pred cccceeeeeecCCcEEEEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcC
Q 003158 568 NLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDH 647 (843)
Q Consensus 568 nIv~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~ 647 (843)
.+.+.+++ +..++||||++|-.|...- ++......++..|++-+.-+-..| |||+|+.+-||++++
T Consensus 172 ~VP~P~~~----nRHaVvMe~ieG~eL~~~r-------~~~en~~~il~~il~~~~~~~~~G---iVHGDlSefNIlV~~ 237 (304)
T COG0478 172 KVPKPIAW----NRHAVVMEYIEGVELYRLR-------LDVENPDEILDKILEEVRKAYRRG---IVHGDLSEFNILVTE 237 (304)
T ss_pred CCCCcccc----ccceeeeehcccceeeccc-------CcccCHHHHHHHHHHHHHHHHHcC---ccccCCchheEEEec
Confidence 66666554 4668999999886665432 112223334445555555454677 999999999999999
Q ss_pred CCcEEEeeccccccCC
Q 003158 648 KFTAKVADFGLSRLAP 663 (843)
Q Consensus 648 ~~~~kl~DfGla~~~~ 663 (843)
+|.+.++||--+....
T Consensus 238 dg~~~vIDwPQ~v~~~ 253 (304)
T COG0478 238 DGDIVVIDWPQAVPIS 253 (304)
T ss_pred CCCEEEEeCcccccCC
Confidence 9999999998776443
No 493
>KOG2137 consensus Protein kinase [Signal transduction mechanisms]
Probab=98.63 E-value=9.5e-09 Score=115.17 Aligned_cols=184 Identities=19% Similarity=0.304 Sum_probs=120.6
Q ss_pred HHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCCC--CcccceeeeeecccCCccCchhccc
Q 003158 616 LGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE--GIVPAHVSTVVKGTPGYLDPEYFLT 693 (843)
Q Consensus 616 ~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~--~~~~~~~~~~~~gt~~y~aPE~~~~ 693 (843)
.+++.|+.|+|... .+||++|.|++|.++..+.+||+.|+.+.....+... ............-...|.|||++..
T Consensus 106 ~~v~dgl~flh~sA--k~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~~ 183 (700)
T KOG2137|consen 106 GNVADGLAFLHRSA--KVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLLG 183 (700)
T ss_pred hcccchhhhhccCc--ceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhcc
Confidence 34558999999854 5999999999999999999999999988654431100 0000111122334568999999999
Q ss_pred CCCCchhhhHHHHHHHHHHHhCCCC-CCCCcchHHHHHHHhhcccchhhccCCCCCCCHHHHHHHHHHHHHhcccCCCCC
Q 003158 694 HKLTDKSDVYSLGVVFLELLTGMQP-ISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDAR 772 (843)
Q Consensus 694 ~~~~~~sDvwS~G~~l~elltg~~p-f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~R 772 (843)
...+.++|+||+||++|.+..|..+ +.........-... ...+-....++.+.+.++.+-+.+.+..++..|
T Consensus 184 ~~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~~~~~~-------~~~~~~~~~~s~~~p~el~~~l~k~l~~~~~~r 256 (700)
T KOG2137|consen 184 TTNTPASDVFSLGVLIYTIYNGGKSIIAANGGLLSYSFSR-------NLLNAGAFGYSNNLPSELRESLKKLLNGDSAVR 256 (700)
T ss_pred ccccccccceeeeeEEEEEecCCcchhhccCCcchhhhhh-------cccccccccccccCcHHHHHHHHHHhcCCcccC
Confidence 8899999999999999999954444 43322211111000 011111112345666778888888899999999
Q ss_pred CCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCCC
Q 003158 773 PSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPS 813 (843)
Q Consensus 773 Ps~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~s 813 (843)
|++..+... ..+.+....+..|+..+.+.||.+--.
T Consensus 257 p~~~~l~~~-----~ff~D~~~~aLrfLD~l~~kdn~qKs~ 292 (700)
T KOG2137|consen 257 PTLDLLLSI-----PFFSDPGLKALRFLDDLPQKDNSQKSS 292 (700)
T ss_pred cchhhhhcc-----cccCCchhhhhhhcccccccCcHHHHH
Confidence 977655422 233344455667888888888876543
No 494
>KOG2982 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.58 E-value=5.6e-09 Score=104.74 Aligned_cols=213 Identities=20% Similarity=0.269 Sum_probs=114.7
Q ss_pred ccccCCCCCCcEEEcccCcCCccCc-ccc-ccCCCCCEEEccCCcccc--CCCcccCCCCCCceeeccCCCCCCCCCccc
Q 003158 34 PEELGYLPKLDRIQIDQNYISGSLP-KSF-ANLNKTRHFHMNNNSISG--QIPPELSRLPSLVHMLLDNNNLTGYLPPEL 109 (843)
Q Consensus 34 p~~~~~l~~L~~L~L~~N~l~~~~~-~~~-~~l~~L~~L~Ls~N~l~~--~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~ 109 (843)
+-.+..+..+..|.+.++.|..+.. ..| ...+.++.|||.+|.|+. .+...+.++|.|+.|+|+.|.+...+-..-
T Consensus 38 ~~~v~s~ra~ellvln~~~id~~gd~~~~~~~~~~v~elDL~~N~iSdWseI~~ile~lP~l~~LNls~N~L~s~I~~lp 117 (418)
T KOG2982|consen 38 YLGVSSLRALELLVLNGSIIDNEGDVMLFGSSVTDVKELDLTGNLISDWSEIGAILEQLPALTTLNLSCNSLSSDIKSLP 117 (418)
T ss_pred eeeeccccchhhheecCCCCCcchhHHHHHHHhhhhhhhhcccchhccHHHHHHHHhcCccceEeeccCCcCCCccccCc
Confidence 3334444455566666666653221 112 233667777777777762 233345677777777777777774333222
Q ss_pred CCCCCCcEEEcCCCCCCCCCCCccccCCCCCcEEEcCCCCCCCCCCC---CCCC-CCCCEEEcccCcCCCCCCCCCCCcC
Q 003158 110 SELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMPD---LSRI-PNLGYLDLSSNQLNGSIPPGRLSLN 185 (843)
Q Consensus 110 ~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~---~~~l-~~L~~L~Ls~N~l~~~~p~~~~~~~ 185 (843)
..+.+|++|.|.+..+..+.....+..++.++.|.|+.|.+..+..+ .... +.+.+|++..|.
T Consensus 118 ~p~~nl~~lVLNgT~L~w~~~~s~l~~lP~vtelHmS~N~~rq~n~Dd~c~e~~s~~v~tlh~~~c~------------- 184 (418)
T KOG2982|consen 118 LPLKNLRVLVLNGTGLSWTQSTSSLDDLPKVTELHMSDNSLRQLNLDDNCIEDWSTEVLTLHQLPCL------------- 184 (418)
T ss_pred ccccceEEEEEcCCCCChhhhhhhhhcchhhhhhhhccchhhhhccccccccccchhhhhhhcCCcH-------------
Confidence 34567777777777776545555666777777777777754322110 1111 122222222221
Q ss_pred cCEEEccCCcCCCCCCcccCCCCCCcEEeCcCccCCCCCC-chhhccccCCCCcceeEEcCCCCCCCCCCC---CcCCCC
Q 003158 186 ITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIP-SSIWQSRTLNATETFILDFQNNNLTNISGS---FNIPPN 261 (843)
Q Consensus 186 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~l~~~~L~~L~l~~N~l~~~~~~---~~~~~l 261 (843)
..+.++-|++. .-++++..+.+..|.|....- ..... .+.+..|+|+.|+|.++... .+++.+
T Consensus 185 -~~~w~~~~~l~-------r~Fpnv~sv~v~e~PlK~~s~ek~se~-----~p~~~~LnL~~~~idswasvD~Ln~f~~l 251 (418)
T KOG2982|consen 185 -EQLWLNKNKLS-------RIFPNVNSVFVCEGPLKTESSEKGSEP-----FPSLSCLNLGANNIDSWASVDALNGFPQL 251 (418)
T ss_pred -HHHHHHHHhHH-------hhcccchheeeecCcccchhhcccCCC-----CCcchhhhhcccccccHHHHHHHcCCchh
Confidence 11222222222 124556666666666543221 12222 23333677788888777542 378999
Q ss_pred cEEEeccCccc
Q 003158 262 VTVRLRGNPFC 272 (843)
Q Consensus 262 ~~l~l~~Np~~ 272 (843)
..|++.+||+.
T Consensus 252 ~dlRv~~~Pl~ 262 (418)
T KOG2982|consen 252 VDLRVSENPLS 262 (418)
T ss_pred heeeccCCccc
Confidence 99999999963
No 495
>KOG2982 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.51 E-value=1.3e-08 Score=102.25 Aligned_cols=213 Identities=20% Similarity=0.302 Sum_probs=131.3
Q ss_pred CCccccCCCCCCEEEccCCcCCccCc-cccC-CCCCCcEEEcccCcCCc--cCccccccCCCCCEEEccCCccccCCCcc
Q 003158 9 IPKEIGNIKSLELLLLNGNELTGSLP-EELG-YLPKLDRIQIDQNYISG--SLPKSFANLNKTRHFHMNNNSISGQIPPE 84 (843)
Q Consensus 9 ~p~~i~~l~~L~~L~L~~n~l~~~~p-~~~~-~l~~L~~L~L~~N~l~~--~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~ 84 (843)
-+-.+..+.-++.|.+.++.|..+.- ..|+ ..+.++.|||.+|.|+. .+...+.+++.|+.|+|+.|.+...+...
T Consensus 37 s~~~v~s~ra~ellvln~~~id~~gd~~~~~~~~~~v~elDL~~N~iSdWseI~~ile~lP~l~~LNls~N~L~s~I~~l 116 (418)
T KOG2982|consen 37 SYLGVSSLRALELLVLNGSIIDNEGDVMLFGSSVTDVKELDLTGNLISDWSEIGAILEQLPALTTLNLSCNSLSSDIKSL 116 (418)
T ss_pred ceeeeccccchhhheecCCCCCcchhHHHHHHHhhhhhhhhcccchhccHHHHHHHHhcCccceEeeccCCcCCCccccC
Confidence 33334444556677888888773322 2232 46789999999999984 34556788999999999999999665543
Q ss_pred cCCCCCCceeeccCCCCC-CCCCcccCCCCCCcEEEcCCCCCCCCCCCc-cccCC-CCCcEEEcCCCCCCCCCC--C-CC
Q 003158 85 LSRLPSLVHMLLDNNNLT-GYLPPELSELPKLLILQLDNNNFEGTTIPA-SYSNM-SKLLKLSLRNCSLQGPMP--D-LS 158 (843)
Q Consensus 85 l~~l~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~-~~~~l-~~L~~L~L~~N~l~~~~~--~-~~ 158 (843)
-..+.+|++|-|.+..+. ...-..+..+|.++.|++|.|++....+.+ ..... +.++.|.+..|....-.. . -.
T Consensus 117 p~p~~nl~~lVLNgT~L~w~~~~s~l~~lP~vtelHmS~N~~rq~n~Dd~c~e~~s~~v~tlh~~~c~~~~w~~~~~l~r 196 (418)
T KOG2982|consen 117 PLPLKNLRVLVLNGTGLSWTQSTSSLDDLPKVTELHMSDNSLRQLNLDDNCIEDWSTEVLTLHQLPCLEQLWLNKNKLSR 196 (418)
T ss_pred cccccceEEEEEcCCCCChhhhhhhhhcchhhhhhhhccchhhhhccccccccccchhhhhhhcCCcHHHHHHHHHhHHh
Confidence 356789999999998886 234456788999999999999554222211 11111 234444443333221000 0 12
Q ss_pred CCCCCCEEEcccCcCCCCCCCCCCC--cCcCEEEccCCcCCCC-CCcccCCCCCCcEEeCcCccCC
Q 003158 159 RIPNLGYLDLSSNQLNGSIPPGRLS--LNITTIKLSNNKLTGT-IPSNFSGLPRLQRLFIANNSLS 221 (843)
Q Consensus 159 ~l~~L~~L~Ls~N~l~~~~p~~~~~--~~L~~L~Ls~N~l~~~-~p~~~~~l~~L~~L~L~~N~l~ 221 (843)
-++++..+-+..|.|+..-...... +.+.-|+|+.|+|..- .-+++.++++|..|.+++|.|.
T Consensus 197 ~Fpnv~sv~v~e~PlK~~s~ek~se~~p~~~~LnL~~~~idswasvD~Ln~f~~l~dlRv~~~Pl~ 262 (418)
T KOG2982|consen 197 IFPNVNSVFVCEGPLKTESSEKGSEPFPSLSCLNLGANNIDSWASVDALNGFPQLVDLRVSENPLS 262 (418)
T ss_pred hcccchheeeecCcccchhhcccCCCCCcchhhhhcccccccHHHHHHHcCCchhheeeccCCccc
Confidence 3456777777777766322222111 1455667777776542 2345667777777777777776
No 496
>PRK09902 hypothetical protein; Provisional
Probab=98.49 E-value=1.7e-06 Score=85.56 Aligned_cols=137 Identities=19% Similarity=0.185 Sum_probs=103.8
Q ss_pred cccCCeeEEEEEeCCCcEEEEEEeccC---C---hhhHHHHHHHHHHHHhccCCc--ccceeeeee-c----CCcEEEEE
Q 003158 520 GQGGYGKVYKGILPDGTVVAVKRAQEG---S---LQGEKEFLTEIQFLSRLHHRN--LVSLVGYCD-E----EGEQMLVY 586 (843)
Q Consensus 520 g~G~~g~Vy~~~~~~~~~vavK~~~~~---~---~~~~~~~~~E~~~l~~l~h~n--Iv~l~~~~~-~----~~~~~lV~ 586 (843)
|+||-+.|++-... |..+-+|+-... + .-+...|.+|+..++.+..-+ +.+.+ ++. . .-.-+||+
T Consensus 27 ~rgG~SgV~r~~~~-g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pv-f~~~~k~~~~~rA~LVT 104 (216)
T PRK09902 27 RRNGMSGVQCVERN-GKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIV-FGEAVKIEGEWRALLVT 104 (216)
T ss_pred CCCCcceEEEEEeC-CcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccc-eeeeeccCCceEEEEEE
Confidence 67888889987764 446888875421 1 235678999999999986332 44444 332 1 12458999
Q ss_pred ecCCC-CCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCc--EEEeecccccc
Q 003158 587 EFMSN-GTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFT--AKVADFGLSRL 661 (843)
Q Consensus 587 e~~~~-gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~--~kl~DfGla~~ 661 (843)
|-+++ .+|.+++......+.+...+..+..++++.+.-||..+ +.|+|+.+.||+++.++. ++++||.-++.
T Consensus 105 e~L~g~~~L~~~l~~~~~~~~~~~~k~~il~~va~~ia~LH~~G---v~Hgdly~khIll~~~g~~~v~lIDlEk~r~ 179 (216)
T PRK09902 105 EDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMHSVN---RQHGCCYVRHIYVKTEGKAEAGFLDLEKSRR 179 (216)
T ss_pred EeCCCCccHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHCC---CcCCCCCHhheeecCCCCeeEEEEEhhccch
Confidence 97753 58999987655556778888899999999999999999 999999999999986666 99999987654
No 497
>COG5238 RNA1 Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Signal transduction mechanisms / RNA processing and modification]
Probab=98.49 E-value=9.2e-09 Score=101.96 Aligned_cols=248 Identities=18% Similarity=0.196 Sum_probs=119.5
Q ss_pred CCCCCEEEccCCcCCccCc----cccCCCCCCcEEEcccCcCC---ccCc-------cccccCCCCCEEEccCCccccCC
Q 003158 16 IKSLELLLLNGNELTGSLP----EELGYLPKLDRIQIDQNYIS---GSLP-------KSFANLNKTRHFHMNNNSISGQI 81 (843)
Q Consensus 16 l~~L~~L~L~~n~l~~~~p----~~~~~l~~L~~L~L~~N~l~---~~~~-------~~~~~l~~L~~L~Ls~N~l~~~~ 81 (843)
+..++.++||+|.|..... ..+.+-++|+..++++-... ..++ ..+..+++|+.++||+|.+....
T Consensus 29 ~d~~~evdLSGNtigtEA~e~l~~~ia~~~~L~vvnfsd~ftgr~kde~~~~L~~Ll~aLlkcp~l~~v~LSDNAfg~~~ 108 (388)
T COG5238 29 MDELVEVDLSGNTIGTEAMEELCNVIANVRNLRVVNFSDAFTGRDKDELYSNLVMLLKALLKCPRLQKVDLSDNAFGSEF 108 (388)
T ss_pred hcceeEEeccCCcccHHHHHHHHHHHhhhcceeEeehhhhhhcccHHHHHHHHHHHHHHHhcCCcceeeeccccccCccc
Confidence 4556666666666663322 33334455555555543322 1111 22344555666666666655444
Q ss_pred Cccc----CCCCCCceeeccCCCCCCCCCcccCCCCCCcEEEcCCCCCCCCCCCccccCCCCCcEEEcCCCCCCCCCCC-
Q 003158 82 PPEL----SRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMPD- 156 (843)
Q Consensus 82 ~~~l----~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~- 156 (843)
|+.+ ++-+.|..|.|+||.+....-.-++. .|. .|..| .-..+-+.|+..+...|++...+..
T Consensus 109 ~e~L~d~is~~t~l~HL~l~NnGlGp~aG~rigk--al~--~la~n--------KKaa~kp~Le~vicgrNRlengs~~~ 176 (388)
T COG5238 109 PEELGDLISSSTDLVHLKLNNNGLGPIAGGRIGK--ALF--HLAYN--------KKAADKPKLEVVICGRNRLENGSKEL 176 (388)
T ss_pred chHHHHHHhcCCCceeEEeecCCCCccchhHHHH--HHH--HHHHH--------hhhccCCCceEEEeccchhccCcHHH
Confidence 4332 34455555555555554221111110 000 00000 0012234455555555555443321
Q ss_pred ----CCCCCCCCEEEcccCcCCCCCCC-----C-CCCcCcCEEEccCCcCCCC----CCcccCCCCCCcEEeCcCccCCC
Q 003158 157 ----LSRIPNLGYLDLSSNQLNGSIPP-----G-RLSLNITTIKLSNNKLTGT----IPSNFSGLPRLQRLFIANNSLSG 222 (843)
Q Consensus 157 ----~~~l~~L~~L~Ls~N~l~~~~p~-----~-~~~~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~ 222 (843)
+..-.+|+.+.+.+|.|....-. . ....+|+.|||.+|-++.. ...++..++.|++|.+.+|.++.
T Consensus 177 ~a~~l~sh~~lk~vki~qNgIrpegv~~L~~~gl~y~~~LevLDlqDNtft~~gS~~La~al~~W~~lrEL~lnDClls~ 256 (388)
T COG5238 177 SAALLESHENLKEVKIQQNGIRPEGVTMLAFLGLFYSHSLEVLDLQDNTFTLEGSRYLADALCEWNLLRELRLNDCLLSN 256 (388)
T ss_pred HHHHHHhhcCceeEEeeecCcCcchhHHHHHHHHHHhCcceeeeccccchhhhhHHHHHHHhcccchhhhccccchhhcc
Confidence 22224555555555555411000 0 1112566666666655532 23455667777888888887776
Q ss_pred CCCchh-hccccCCCCcceeEEcCCCCCCCCCC------C---CcCCCCcEEEeccCcccccC
Q 003158 223 SIPSSI-WQSRTLNATETFILDFQNNNLTNISG------S---FNIPPNVTVRLRGNPFCLNT 275 (843)
Q Consensus 223 ~~p~~~-~~l~~l~~~~L~~L~l~~N~l~~~~~------~---~~~~~l~~l~l~~Np~~c~~ 275 (843)
....++ ........|+|..|-+.+|....=.. . -.+|.|..|.+.||.+.=+.
T Consensus 257 ~G~~~v~~~f~e~~~p~l~~L~~~Yne~~~~~i~~~~l~~~e~~~~p~L~~le~ngNr~~E~~ 319 (388)
T COG5238 257 EGVKSVLRRFNEKFVPNLMPLPGDYNERRGGIILDISLNEFEQDAVPLLVDLERNGNRIKELA 319 (388)
T ss_pred ccHHHHHHHhhhhcCCCccccccchhhhcCceeeeechhhhhhcccHHHHHHHHccCcchhHH
Confidence 544433 33344556777778888776553211 0 15677777888888876433
No 498
>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]
Probab=98.47 E-value=3.9e-09 Score=94.17 Aligned_cols=110 Identities=19% Similarity=0.309 Sum_probs=68.4
Q ss_pred CCcEEEcccCcCCccCccccccC---CCCCEEEccCCccccCCCcccC-CCCCCceeeccCCCCCCCCCcccCCCCCCcE
Q 003158 42 KLDRIQIDQNYISGSLPKSFANL---NKTRHFHMNNNSISGQIPPELS-RLPSLVHMLLDNNNLTGYLPPELSELPKLLI 117 (843)
Q Consensus 42 ~L~~L~L~~N~l~~~~~~~~~~l---~~L~~L~Ls~N~l~~~~~~~l~-~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 117 (843)
.+..++|++|.+. .+++...++ ..|+.++|++|.+. ..|..|. ..+.++.|+|++|+|. .+|..+..++.|+.
T Consensus 28 E~h~ldLssc~lm-~i~davy~l~~~~el~~i~ls~N~fk-~fp~kft~kf~t~t~lNl~~neis-dvPeE~Aam~aLr~ 104 (177)
T KOG4579|consen 28 ELHFLDLSSCQLM-YIADAVYMLSKGYELTKISLSDNGFK-KFPKKFTIKFPTATTLNLANNEIS-DVPEELAAMPALRS 104 (177)
T ss_pred Hhhhcccccchhh-HHHHHHHHHhCCceEEEEecccchhh-hCCHHHhhccchhhhhhcchhhhh-hchHHHhhhHHhhh
Confidence 3555666666665 444444333 45555677777776 4444443 3446777777777777 45666777777777
Q ss_pred EEcCCCCCCCCCCCccccCCCCCcEEEcCCCCCCCCCCC
Q 003158 118 LQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMPD 156 (843)
Q Consensus 118 L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~ 156 (843)
|+++.|.+. ..|..+..+.+|..|+..+|.+..++.+
T Consensus 105 lNl~~N~l~--~~p~vi~~L~~l~~Lds~~na~~eid~d 141 (177)
T KOG4579|consen 105 LNLRFNPLN--AEPRVIAPLIKLDMLDSPENARAEIDVD 141 (177)
T ss_pred cccccCccc--cchHHHHHHHhHHHhcCCCCccccCcHH
Confidence 777777775 4566666666677777776666655554
No 499
>COG5238 RNA1 Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Signal transduction mechanisms / RNA processing and modification]
Probab=98.46 E-value=1.6e-08 Score=100.28 Aligned_cols=219 Identities=19% Similarity=0.163 Sum_probs=128.6
Q ss_pred cCCCCCCcEEEcccCcCCccCc----cccccCCCCCEEEccCCccccCCCcccCCCCCCceeeccCCCCCCCCCcccCCC
Q 003158 37 LGYLPKLDRIQIDQNYISGSLP----KSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSEL 112 (843)
Q Consensus 37 ~~~l~~L~~L~L~~N~l~~~~~----~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l 112 (843)
+..+..++.++||+|.|...-. +.+++-.+|+..++++--.. ...+.+. .+|+ .+..++..|
T Consensus 26 l~~~d~~~evdLSGNtigtEA~e~l~~~ia~~~~L~vvnfsd~ftg-r~kde~~--~~L~-----------~Ll~aLlkc 91 (388)
T COG5238 26 LEMMDELVEVDLSGNTIGTEAMEELCNVIANVRNLRVVNFSDAFTG-RDKDELY--SNLV-----------MLLKALLKC 91 (388)
T ss_pred HHhhcceeEEeccCCcccHHHHHHHHHHHhhhcceeEeehhhhhhc-ccHHHHH--HHHH-----------HHHHHHhcC
Confidence 3346778888888888874433 33455567777777653322 1111100 0011 111234455
Q ss_pred CCCcEEEcCCCCCCCCCCCc----cccCCCCCcEEEcCCCCCCCCCC--------------CCCCCCCCCEEEcccCcCC
Q 003158 113 PKLLILQLDNNNFEGTTIPA----SYSNMSKLLKLSLRNCSLQGPMP--------------DLSRIPNLGYLDLSSNQLN 174 (843)
Q Consensus 113 ~~L~~L~Ls~N~l~~~~~~~----~~~~l~~L~~L~L~~N~l~~~~~--------------~~~~l~~L~~L~Ls~N~l~ 174 (843)
|+|+..+||+|.|.. ..|. .++.-+.|.+|.|++|.+..+.. ....-|.|+.+....|++.
T Consensus 92 p~l~~v~LSDNAfg~-~~~e~L~d~is~~t~l~HL~l~NnGlGp~aG~rigkal~~la~nKKaa~kp~Le~vicgrNRle 170 (388)
T COG5238 92 PRLQKVDLSDNAFGS-EFPEELGDLISSSTDLVHLKLNNNGLGPIAGGRIGKALFHLAYNKKAADKPKLEVVICGRNRLE 170 (388)
T ss_pred CcceeeeccccccCc-ccchHHHHHHhcCCCceeEEeecCCCCccchhHHHHHHHHHHHHhhhccCCCceEEEeccchhc
Confidence 566666666665543 3332 23445566666666666543221 1345588999999999997
Q ss_pred CCCCCCC----C-C-cCcCEEEccCCcCCCC-----CCcccCCCCCCcEEeCcCccCCCCCCchhhccccCCCCcceeEE
Q 003158 175 GSIPPGR----L-S-LNITTIKLSNNKLTGT-----IPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILD 243 (843)
Q Consensus 175 ~~~p~~~----~-~-~~L~~L~Ls~N~l~~~-----~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~l~~~~L~~L~ 243 (843)
..+... + . -+|+.+.+.+|.|.-. +-..+..+.+|+.|||.+|-++-.....++..- -..+.|+.|.
T Consensus 171 -ngs~~~~a~~l~sh~~lk~vki~qNgIrpegv~~L~~~gl~y~~~LevLDlqDNtft~~gS~~La~al-~~W~~lrEL~ 248 (388)
T COG5238 171 -NGSKELSAALLESHENLKEVKIQQNGIRPEGVTMLAFLGLFYSHSLEVLDLQDNTFTLEGSRYLADAL-CEWNLLRELR 248 (388)
T ss_pred -cCcHHHHHHHHHhhcCceeEEeeecCcCcchhHHHHHHHHHHhCcceeeeccccchhhhhHHHHHHHh-cccchhhhcc
Confidence 444321 1 1 2799999999988632 112344578999999999999855444433221 1345578999
Q ss_pred cCCCCCCCCCCC--------CcCCCCcEEEeccCccc
Q 003158 244 FQNNNLTNISGS--------FNIPPNVTVRLRGNPFC 272 (843)
Q Consensus 244 l~~N~l~~~~~~--------~~~~~l~~l~l~~Np~~ 272 (843)
+.++-++.-... ...|++..|....|-..
T Consensus 249 lnDClls~~G~~~v~~~f~e~~~p~l~~L~~~Yne~~ 285 (388)
T COG5238 249 LNDCLLSNEGVKSVLRRFNEKFVPNLMPLPGDYNERR 285 (388)
T ss_pred ccchhhccccHHHHHHHhhhhcCCCccccccchhhhc
Confidence 999988865431 15677777766666543
No 500
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.46 E-value=1.2e-09 Score=121.37 Aligned_cols=102 Identities=31% Similarity=0.378 Sum_probs=55.5
Q ss_pred CCCEEEccCCccccCCCcccCCCCCCceeeccCCCCCCCCCcccCCCCCCcEEEcCCCCCCCCCCCc-cccCCCCCcEEE
Q 003158 66 KTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPA-SYSNMSKLLKLS 144 (843)
Q Consensus 66 ~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~-~~~~l~~L~~L~ 144 (843)
.|...+.+.|.+. ....++.-++.|+.|+|++|+++.. ..+..+++|+.|||+.|.+. .+|. ...++. |+.|.
T Consensus 165 ~L~~a~fsyN~L~-~mD~SLqll~ale~LnLshNk~~~v--~~Lr~l~~LkhLDlsyN~L~--~vp~l~~~gc~-L~~L~ 238 (1096)
T KOG1859|consen 165 KLATASFSYNRLV-LMDESLQLLPALESLNLSHNKFTKV--DNLRRLPKLKHLDLSYNCLR--HVPQLSMVGCK-LQLLN 238 (1096)
T ss_pred hHhhhhcchhhHH-hHHHHHHHHHHhhhhccchhhhhhh--HHHHhcccccccccccchhc--cccccchhhhh-heeee
Confidence 4555566666665 4455555556666666666666533 25555666666666666664 2332 122222 66666
Q ss_pred cCCCCCCCCCCCCCCCCCCCEEEcccCcCC
Q 003158 145 LRNCSLQGPMPDLSRIPNLGYLDLSSNQLN 174 (843)
Q Consensus 145 L~~N~l~~~~~~~~~l~~L~~L~Ls~N~l~ 174 (843)
|++|.++.+ .++.++.+|+.||+++|-|.
T Consensus 239 lrnN~l~tL-~gie~LksL~~LDlsyNll~ 267 (1096)
T KOG1859|consen 239 LRNNALTTL-RGIENLKSLYGLDLSYNLLS 267 (1096)
T ss_pred ecccHHHhh-hhHHhhhhhhccchhHhhhh
Confidence 666655532 22455556666666666555
Done!