Query 003158
Match_columns 843
No_of_seqs 725 out of 6095
Neff 9.0
Searched_HMMs 29240
Date Mon Mar 25 15:23:22 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/003158.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/003158hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4asz_A BDNF/NT-3 growth factor 100.0 3.8E-54 1.3E-58 458.9 19.1 262 511-790 13-292 (299)
2 4aoj_A High affinity nerve gro 100.0 1.8E-53 6E-58 460.1 23.1 261 511-789 41-321 (329)
3 4gt4_A Tyrosine-protein kinase 100.0 1.5E-53 5.2E-58 456.2 18.4 258 512-787 27-306 (308)
4 4fih_A Serine/threonine-protei 100.0 3E-53 1E-57 457.4 19.0 258 511-828 74-332 (346)
5 3omv_A RAF proto-oncogene seri 100.0 4.5E-52 1.5E-56 442.8 25.3 267 508-791 33-304 (307)
6 4aw0_A HPDK1, 3-phosphoinositi 100.0 4.6E-53 1.6E-57 449.1 17.2 260 511-830 32-301 (311)
7 3ubd_A Ribosomal protein S6 ki 100.0 9.7E-54 3.3E-58 454.5 8.5 270 511-842 24-304 (304)
8 4fie_A Serine/threonine-protei 100.0 4.9E-52 1.7E-56 458.8 21.6 258 511-828 151-409 (423)
9 4g3f_A NF-kappa-beta-inducing 100.0 6.7E-52 2.3E-56 445.6 19.5 255 511-787 58-316 (336)
10 4b9d_A Serine/threonine-protei 100.0 4.4E-52 1.5E-56 449.0 17.7 250 511-780 24-276 (350)
11 3hyh_A Carbon catabolite-derep 100.0 3.8E-52 1.3E-56 436.2 15.7 253 511-827 13-270 (275)
12 3fpq_A Serine/threonine-protei 100.0 8.7E-52 3E-56 437.4 18.5 253 514-826 29-289 (290)
13 4ase_A Vascular endothelial gr 100.0 7E-51 2.4E-55 443.3 20.2 271 501-788 54-348 (353)
14 4f9c_A Cell division cycle 7-r 100.0 3.7E-50 1.3E-54 440.6 16.9 302 509-825 19-358 (361)
15 4b99_A Mitogen-activated prote 100.0 9.2E-50 3.2E-54 442.1 15.8 287 511-826 54-351 (398)
16 4g31_A Eukaryotic translation 100.0 3.9E-49 1.3E-53 421.0 18.2 264 511-828 5-288 (299)
17 3hmm_A TGF-beta receptor type- 100.0 1.2E-48 4.2E-53 419.2 19.7 264 512-787 4-297 (303)
18 3v5w_A G-protein coupled recep 100.0 1E-47 3.5E-52 442.5 17.4 271 511-842 189-472 (689)
19 3uto_A Twitchin; kinase, muscl 100.0 2.2E-46 7.5E-51 435.4 21.5 260 510-828 156-419 (573)
20 3fe3_A MAP/microtubule affinit 100.0 1.1E-43 3.6E-48 386.4 18.9 258 510-830 14-275 (328)
21 4dc2_A Protein kinase C IOTA t 100.0 4.6E-44 1.6E-48 397.6 15.8 281 510-843 51-342 (396)
22 4aw2_A Serine/threonine-protei 100.0 1.7E-44 5.8E-49 406.4 12.1 283 502-842 65-359 (437)
23 3uim_A Brassinosteroid insensi 100.0 4E-43 1.4E-47 382.3 22.6 286 494-785 13-309 (326)
24 1o6l_A RAC-beta serine/threoni 100.0 1.3E-43 4.4E-48 386.8 18.7 202 510-723 4-209 (337)
25 3txo_A PKC-L, NPKC-ETA, protei 100.0 2.8E-44 9.7E-49 394.7 13.4 274 508-843 20-304 (353)
26 3fxz_A Serine/threonine-protei 100.0 7.7E-43 2.6E-47 374.8 23.3 259 510-828 19-278 (297)
27 3niz_A Rhodanese family protei 100.0 1.9E-43 6.6E-48 382.1 18.1 277 510-827 20-308 (311)
28 2qkw_B Protein kinase; three-h 100.0 8.4E-43 2.9E-47 379.0 23.2 276 505-788 33-316 (321)
29 3v8s_A RHO-associated protein 100.0 1.1E-43 3.8E-48 396.7 16.4 281 504-843 62-353 (410)
30 1fot_A TPK1 delta, CAMP-depend 100.0 1.4E-43 4.9E-48 383.7 16.5 268 510-842 5-281 (318)
31 3a8x_A Protein kinase C IOTA t 100.0 2.9E-43 1E-47 385.7 17.7 279 511-842 9-298 (345)
32 1xjd_A Protein kinase C, theta 100.0 2.8E-43 9.5E-48 385.3 16.7 274 507-842 13-292 (345)
33 3zgw_A Maternal embryonic leuc 100.0 2.7E-43 9.1E-48 385.5 15.9 259 509-828 8-269 (347)
34 3a62_A Ribosomal protein S6 ki 100.0 4.4E-43 1.5E-47 382.0 15.8 202 510-723 16-225 (327)
35 2yab_A Death-associated protei 100.0 1.5E-42 5.2E-47 381.9 20.0 259 510-827 11-280 (361)
36 2psq_A Fibroblast growth facto 100.0 3.3E-42 1.1E-46 381.5 22.5 262 510-789 80-366 (370)
37 2i0e_A Protein kinase C-beta I 100.0 5.2E-43 1.8E-47 384.4 15.8 272 509-842 18-299 (353)
38 3o0g_A Cell division protein k 100.0 4.2E-43 1.4E-47 375.9 14.5 276 511-826 2-289 (292)
39 1rdq_E PKA C-alpha, CAMP-depen 100.0 6.2E-43 2.1E-47 383.7 15.9 267 511-842 41-316 (350)
40 2vd5_A DMPK protein; serine/th 100.0 7.6E-43 2.6E-47 390.2 16.5 283 502-842 52-348 (412)
41 2c30_A Serine/threonine-protei 100.0 4.3E-42 1.5E-46 373.1 21.8 269 499-827 23-302 (321)
42 1ob3_A PFPK5, cell division co 100.0 5.7E-43 1.9E-47 374.2 14.0 275 511-826 2-287 (288)
43 3llt_A Serine/threonine kinase 100.0 5.8E-43 2E-47 386.7 14.5 301 497-824 21-360 (360)
44 3kul_A Ephrin type-A receptor 100.0 6.4E-42 2.2E-46 372.5 21.8 264 510-791 48-317 (325)
45 2acx_A G protein-coupled recep 100.0 1.1E-42 3.6E-47 400.8 15.8 277 509-842 182-467 (576)
46 4fr4_A YANK1, serine/threonine 100.0 1.4E-42 4.9E-47 384.3 16.1 200 510-722 14-220 (384)
47 3gni_B Strad alpha; kinase fol 100.0 1.5E-42 5.2E-47 387.4 16.5 307 510-828 24-342 (389)
48 1tki_A Titin; serine kinase, m 100.0 2.5E-42 8.6E-47 374.8 17.5 259 510-827 4-265 (321)
49 2pmi_A Negative RE, cyclin-dep 100.0 1.4E-42 4.7E-47 376.5 15.3 290 510-828 4-302 (317)
50 3oz6_A Mitogen-activated prote 100.0 4.3E-42 1.5E-46 383.6 18.7 305 509-826 7-335 (388)
51 3p86_A Serine/threonine-protei 100.0 1.6E-41 5.6E-46 366.4 22.4 265 506-788 32-299 (309)
52 1kob_A Twitchin; kinase, intra 100.0 1.4E-41 4.8E-46 377.6 22.1 260 510-828 50-313 (387)
53 3c4z_A Rhodopsin kinase; Ser/T 100.0 2.4E-42 8.3E-47 397.1 16.0 203 510-722 184-392 (543)
54 2nru_A Interleukin-1 receptor- 100.0 2.5E-40 8.4E-45 357.0 30.5 280 497-786 11-305 (307)
55 3g33_A Cell division protein k 100.0 1.1E-41 3.6E-46 368.0 19.4 286 508-828 6-305 (308)
56 4ejn_A RAC-alpha serine/threon 100.0 9.1E-43 3.1E-47 396.2 11.5 271 510-842 147-427 (446)
57 2y0a_A Death-associated protei 100.0 9.7E-42 3.3E-46 371.2 18.8 259 510-827 10-279 (326)
58 2r5t_A Serine/threonine-protei 100.0 1.9E-42 6.4E-47 382.7 13.3 202 510-723 37-243 (373)
59 4hcu_A Tyrosine-protein kinase 100.0 1.4E-41 4.9E-46 359.5 19.0 257 510-787 9-266 (269)
60 3sxs_A Cytoplasmic tyrosine-pr 100.0 2E-41 6.8E-46 358.1 20.0 259 509-788 6-265 (268)
61 3s95_A LIMK-1, LIM domain kina 100.0 2E-41 6.7E-46 366.3 20.4 268 510-789 9-284 (310)
62 3h4j_B AMPK kdaid, SNF1-like p 100.0 3.7E-42 1.3E-46 375.0 14.5 254 511-828 9-267 (336)
63 1qcf_A Haematopoetic cell kina 100.0 3.1E-42 1.1E-46 392.5 14.4 265 503-788 180-445 (454)
64 3soa_A Calcium/calmodulin-depe 100.0 1.8E-41 6.2E-46 383.1 20.2 259 509-825 9-273 (444)
65 2x4f_A Myosin light chain kina 100.0 6.8E-42 2.3E-46 379.1 16.2 253 516-826 94-349 (373)
66 3ttj_A Mitogen-activated prote 100.0 3.6E-42 1.2E-46 391.9 14.3 284 510-825 61-361 (464)
67 3ugc_A Tyrosine-protein kinase 100.0 1.6E-41 5.3E-46 364.3 18.3 272 510-789 9-293 (295)
68 3rp9_A Mitogen-activated prote 100.0 1.7E-41 5.9E-46 387.3 19.7 297 511-828 53-405 (458)
69 1k9a_A Carboxyl-terminal SRC k 100.0 4.4E-41 1.5E-45 382.3 23.0 256 507-788 189-446 (450)
70 3c0i_A Peripheral plasma membr 100.0 5.6E-42 1.9E-46 377.0 15.0 203 510-722 23-236 (351)
71 3cbl_A C-FES, proto-oncogene t 100.0 8.6E-42 2.9E-46 379.4 16.6 265 505-788 108-375 (377)
72 2bdw_A Hypothetical protein K1 100.0 1.8E-41 6E-46 374.3 18.8 258 509-825 27-290 (362)
73 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 9.3E-42 3.2E-46 388.1 17.1 264 504-788 177-441 (452)
74 3vhe_A Vascular endothelial gr 100.0 1.9E-41 6.7E-46 374.2 19.0 270 501-787 12-355 (359)
75 3tki_A Serine/threonine-protei 100.0 1.6E-41 5.3E-46 369.0 17.8 204 510-723 6-212 (323)
76 2qol_A Ephrin receptor; recept 100.0 2.6E-41 8.8E-46 374.6 19.7 261 510-788 44-310 (373)
77 3mtl_A Cell division protein k 100.0 7.1E-42 2.4E-46 372.1 14.7 287 511-831 2-293 (324)
78 1luf_A Muscle-specific tyrosin 100.0 2.8E-41 9.7E-46 370.4 19.1 264 508-789 44-337 (343)
79 2w4o_A Calcium/calmodulin-depe 100.0 1.8E-41 6.2E-46 372.5 17.4 259 510-828 52-314 (349)
80 2ac3_A MAP kinase-interacting 100.0 2E-41 7E-46 367.1 17.4 283 510-828 11-304 (316)
81 2zv2_A Calcium/calmodulin-depe 100.0 3E-41 1E-45 362.7 18.4 254 510-824 12-297 (298)
82 3tt0_A Basic fibroblast growth 100.0 8.5E-41 2.9E-45 372.2 22.7 265 509-791 67-356 (382)
83 3kn6_A Ribosomal protein S6 ki 100.0 3.7E-41 1.3E-45 366.4 19.3 259 516-828 16-279 (325)
84 2ivs_A Proto-oncogene tyrosine 100.0 3.3E-41 1.1E-45 364.9 18.6 262 508-787 20-311 (314)
85 3gen_A Tyrosine-protein kinase 100.0 1.6E-41 5.6E-46 361.7 15.8 263 505-788 18-281 (283)
86 3gbz_A Kinase, CMGC CDK; ssgci 100.0 4.9E-42 1.7E-46 374.2 11.3 285 510-828 33-327 (329)
87 1opk_A P150, C-ABL, proto-onco 100.0 4.7E-41 1.6E-45 386.5 19.9 262 505-786 214-477 (495)
88 3uc3_A Serine/threonine-protei 100.0 1.7E-41 5.9E-46 374.4 15.6 260 510-827 19-282 (361)
89 3soc_A Activin receptor type-2 100.0 5.8E-41 2E-45 364.6 19.5 267 509-788 22-319 (322)
90 3lm5_A Serine/threonine-protei 100.0 4.3E-41 1.5E-45 366.5 18.2 280 499-835 16-303 (327)
91 2eue_A Carbon catabolite derep 100.0 2.6E-41 8.8E-46 358.7 15.9 254 511-828 13-271 (275)
92 3l9p_A Anaplastic lymphoma kin 100.0 2.8E-41 9.6E-46 373.7 16.6 260 510-787 70-345 (367)
93 4eqm_A Protein kinase; transfe 100.0 1.2E-40 4E-45 357.3 20.8 261 510-787 10-275 (294)
94 3pfq_A PKC-B, PKC-beta, protei 100.0 1.8E-41 6E-46 402.9 15.9 274 508-843 338-621 (674)
95 3kfa_A Tyrosine-protein kinase 100.0 4.8E-41 1.7E-45 359.0 17.6 264 505-788 7-272 (288)
96 3lb7_A RAF proto-oncogene seri 100.0 3.6E-40 1.2E-44 355.7 24.5 266 509-791 34-304 (307)
97 2eva_A TAK1 kinase - TAB1 chim 100.0 3.9E-40 1.3E-44 355.5 24.5 261 511-794 8-270 (307)
98 1mp8_A Focal adhesion kinase 1 100.0 5.5E-41 1.9E-45 357.4 17.4 258 509-787 13-276 (281)
99 1qpc_A LCK kinase; alpha beta 100.0 4.6E-41 1.6E-45 357.5 16.6 265 505-790 7-272 (279)
100 3kvw_A DYRK2, dual specificity 100.0 5.9E-41 2E-45 378.7 18.3 286 510-828 96-417 (429)
101 1cm8_A Phosphorylated MAP kina 100.0 1.6E-41 5.4E-46 375.6 13.0 276 510-827 24-315 (367)
102 3qup_A Tyrosine-protein kinase 100.0 5.8E-41 2E-45 364.8 16.9 264 506-787 18-298 (323)
103 3mi9_A Cell division protein k 100.0 1.1E-40 3.8E-45 367.0 19.4 295 510-831 16-323 (351)
104 3f3z_A Calcium/calmodulin-depe 100.0 7.1E-41 2.4E-45 355.6 17.2 259 510-828 8-270 (277)
105 4agu_A Cyclin-dependent kinase 100.0 7.2E-41 2.5E-45 361.9 17.5 286 511-829 3-294 (311)
106 3n9x_A Phosphotransferase; mal 100.0 4.3E-41 1.5E-45 380.5 16.4 294 510-828 25-370 (432)
107 3kex_A Receptor tyrosine-prote 100.0 5.1E-41 1.7E-45 365.6 16.3 258 510-787 12-276 (325)
108 3poz_A Epidermal growth factor 100.0 7.6E-41 2.6E-45 364.5 17.6 258 510-787 14-278 (327)
109 3nsz_A CK II alpha, casein kin 100.0 1.9E-40 6.6E-45 361.7 20.6 279 511-827 36-327 (330)
110 3dtc_A Mitogen-activated prote 100.0 2.4E-40 8.1E-45 350.4 20.6 253 510-784 6-270 (271)
111 2a2a_A Death-associated protei 100.0 1.1E-40 3.7E-45 362.3 18.4 259 510-827 11-280 (321)
112 1t46_A HOMO sapiens V-KIT hard 100.0 3.8E-40 1.3E-44 356.5 22.5 265 508-789 20-309 (313)
113 3p1a_A MYT1 kinase, membrane-a 100.0 9.7E-41 3.3E-45 360.9 17.8 252 509-825 55-310 (311)
114 3kmu_A ILK, integrin-linked ki 100.0 2.1E-40 7.1E-45 350.5 19.7 254 510-786 9-269 (271)
115 1rjb_A FL cytokine receptor; k 100.0 1.8E-40 6.1E-45 364.3 19.8 267 506-789 40-336 (344)
116 1mqb_A Ephrin type-A receptor 100.0 4.2E-40 1.4E-44 359.5 22.5 276 511-812 44-326 (333)
117 2y94_A 5'-AMP-activated protei 100.0 4.4E-41 1.5E-45 382.4 15.3 200 511-723 16-220 (476)
118 2izr_A Casein kinase I isoform 100.0 4.5E-40 1.5E-44 358.9 22.5 272 510-794 8-288 (330)
119 3is5_A Calcium-dependent prote 100.0 1.6E-40 5.4E-45 354.6 18.5 257 510-825 21-284 (285)
120 1csn_A Casein kinase-1; phosph 100.0 2.6E-40 8.7E-45 355.2 20.1 271 510-792 9-288 (298)
121 3kk8_A Calcium/calmodulin depe 100.0 3.6E-40 1.2E-44 351.5 21.1 260 510-828 5-270 (284)
122 3t9t_A Tyrosine-protein kinase 100.0 8.8E-41 3E-45 352.7 16.1 257 510-787 7-264 (267)
123 2h8h_A Proto-oncogene tyrosine 100.0 3E-41 1E-45 391.6 13.6 265 503-788 259-524 (535)
124 1ua2_A CAK, cell division prot 100.0 4.1E-41 1.4E-45 369.6 13.4 285 509-827 8-299 (346)
125 2fst_X Mitogen-activated prote 100.0 1.8E-41 6.3E-46 374.7 10.5 277 510-827 28-319 (367)
126 3op5_A Serine/threonine-protei 100.0 3.1E-40 1.1E-44 365.3 20.2 279 509-795 33-337 (364)
127 3eqc_A Dual specificity mitoge 100.0 3.5E-41 1.2E-45 372.4 12.5 296 510-828 32-333 (360)
128 2pvf_A Fibroblast growth facto 100.0 3.9E-40 1.3E-44 360.0 20.7 264 509-790 33-321 (334)
129 2rku_A Serine/threonine-protei 100.0 2.5E-40 8.6E-45 354.7 18.6 257 510-828 14-274 (294)
130 3rgf_A Cyclin-dependent kinase 100.0 9.6E-41 3.3E-45 374.8 15.9 295 511-828 20-342 (405)
131 4aaa_A Cyclin-dependent kinase 100.0 1E-40 3.4E-45 364.3 15.6 286 510-828 24-315 (331)
132 2qr7_A Ribosomal protein S6 ki 100.0 5.3E-41 1.8E-45 367.3 13.1 257 509-825 20-283 (342)
133 2owb_A Serine/threonine-protei 100.0 2.9E-40 9.8E-45 361.2 18.7 257 510-828 40-300 (335)
134 2r3i_A Cell division protein k 100.0 1E-40 3.4E-45 358.6 14.7 286 511-828 3-292 (299)
135 3pg1_A Mitogen-activated prote 100.0 1.1E-40 3.8E-45 368.7 15.1 291 502-828 13-325 (362)
136 2xir_A Vascular endothelial gr 100.0 5.5E-40 1.9E-44 355.7 20.2 271 501-788 17-311 (316)
137 4euu_A Serine/threonine-protei 100.0 1.3E-39 4.3E-44 353.6 23.1 265 510-785 8-307 (319)
138 1nxk_A MAP kinase-activated pr 100.0 1.5E-40 5.1E-45 371.8 16.2 196 511-722 61-266 (400)
139 1vzo_A Ribosomal protein S6 ki 100.0 3.3E-41 1.1E-45 371.5 10.6 202 510-722 53-265 (355)
140 3eb0_A Putative uncharacterize 100.0 1.6E-40 5.4E-45 370.2 16.3 281 507-825 3-327 (383)
141 2i1m_A Macrophage colony-stimu 100.0 2.9E-40 9.8E-45 360.9 17.9 266 505-787 40-326 (333)
142 3brb_A Proto-oncogene tyrosine 100.0 4E-40 1.4E-44 356.5 18.2 270 504-791 27-312 (313)
143 1wak_A Serine/threonine-protei 100.0 8E-41 2.7E-45 374.4 13.1 198 510-722 36-296 (397)
144 2xrw_A Mitogen-activated prote 100.0 3.7E-40 1.3E-44 365.5 18.3 285 510-826 24-325 (371)
145 3cok_A Serine/threonine-protei 100.0 4.9E-40 1.7E-44 349.3 18.3 257 511-828 11-271 (278)
146 1p4o_A Insulin-like growth fac 100.0 1.4E-40 4.8E-45 361.5 14.4 269 501-787 15-299 (322)
147 2ozo_A Tyrosine-protein kinase 100.0 8.8E-40 3E-44 384.7 22.2 261 512-791 336-602 (613)
148 3q4u_A Activin receptor type-1 100.0 6.3E-40 2.1E-44 352.7 19.1 256 510-785 7-300 (301)
149 1x8b_A WEE1HU, WEE1-like prote 100.0 2.9E-40 1E-44 352.6 16.3 252 509-826 9-286 (289)
150 3i6u_A CDS1, serine/threonine- 100.0 1.4E-40 4.8E-45 374.6 14.5 260 508-826 132-406 (419)
151 3lxp_A Non-receptor tyrosine-p 100.0 8.4E-40 2.9E-44 354.8 20.0 269 513-791 33-314 (318)
152 3cc6_A Protein tyrosine kinase 100.0 1.3E-39 4.6E-44 346.6 21.1 259 509-788 10-274 (281)
153 2jam_A Calcium/calmodulin-depe 100.0 3.3E-40 1.1E-44 355.6 16.5 201 509-723 7-211 (304)
154 3c1x_A Hepatocyte growth facto 100.0 6.2E-40 2.1E-44 363.1 19.0 263 512-791 90-359 (373)
155 3lxl_A Tyrosine-protein kinase 100.0 4.5E-40 1.5E-44 358.4 17.2 273 510-790 22-306 (327)
156 4f0f_A Serine/threonine-protei 100.0 2.4E-39 8.3E-44 345.7 22.4 254 510-784 18-286 (287)
157 3f66_A Hepatocyte growth facto 100.0 2E-39 6.8E-44 348.3 21.9 263 511-790 25-294 (298)
158 1u59_A Tyrosine-protein kinase 100.0 1.6E-39 5.4E-44 347.3 20.9 261 510-789 8-274 (287)
159 2jii_A Serine/threonine-protei 100.0 3.6E-40 1.2E-44 363.0 16.4 270 511-791 42-340 (352)
160 1byg_A CSK, protein (C-termina 100.0 5.9E-40 2E-44 348.8 17.4 254 509-788 19-274 (278)
161 3qyz_A Mitogen-activated prote 100.0 3.1E-40 1.1E-44 365.3 15.6 285 510-826 26-320 (364)
162 4e5w_A Tyrosine-protein kinase 100.0 8.8E-40 3E-44 351.8 18.5 269 510-786 20-301 (302)
163 2y7j_A Phosphorylase B kinase 100.0 8.9E-40 3.1E-44 361.4 18.8 262 504-824 87-364 (365)
164 1z57_A Dual specificity protei 100.0 5.1E-40 1.7E-44 359.4 16.6 288 510-825 13-334 (339)
165 1xbb_A Tyrosine-protein kinase 100.0 7.7E-40 2.6E-44 350.4 17.6 261 508-788 13-280 (291)
166 3ork_A Serine/threonine protei 100.0 1.1E-39 3.8E-44 352.7 18.8 261 510-786 11-280 (311)
167 3og7_A AKAP9-BRAF fusion prote 100.0 2.4E-39 8.2E-44 346.2 21.2 262 508-786 21-287 (289)
168 4fvq_A Tyrosine-protein kinase 100.0 6E-40 2E-44 350.7 16.3 252 510-787 7-275 (289)
169 2vx3_A Dual specificity tyrosi 100.0 1.1E-39 3.7E-44 363.3 18.9 201 509-724 52-263 (382)
170 1t4h_A Serine/threonine-protei 100.0 1.8E-39 6.1E-44 347.3 19.7 254 512-826 27-289 (290)
171 3qd2_B Eukaryotic translation 100.0 1.2E-39 4.1E-44 355.5 18.5 207 510-719 5-276 (332)
172 3byv_A Rhoptry kinase; malaria 100.0 2.6E-41 8.9E-46 375.7 5.3 197 510-721 72-315 (377)
173 3bhy_A Death-associated protei 100.0 9.6E-40 3.3E-44 348.0 17.2 257 510-825 4-271 (283)
174 3pls_A Macrophage-stimulating 100.0 5.4E-39 1.8E-43 344.8 23.0 264 512-791 22-291 (298)
175 2yex_A Serine/threonine-protei 100.0 1.7E-39 5.6E-44 344.8 18.8 262 510-828 6-270 (276)
176 4e7w_A Glycogen synthase kinas 100.0 9.4E-40 3.2E-44 364.9 17.5 282 510-829 39-331 (394)
177 3dbq_A Dual specificity protei 100.0 3E-39 1E-43 354.3 21.0 251 510-781 8-274 (343)
178 1j1b_A Glycogen synthase kinas 100.0 5.7E-40 1.9E-44 369.8 15.6 278 511-826 54-343 (420)
179 3lzb_A Epidermal growth factor 100.0 2.2E-39 7.4E-44 352.9 19.6 258 510-787 14-278 (327)
180 3lij_A Calcium/calmodulin depe 100.0 1E-39 3.5E-44 376.0 17.9 256 510-825 36-297 (494)
181 2a19_B Interferon-induced, dou 100.0 1.5E-39 5.3E-44 346.4 18.0 251 509-789 9-276 (284)
182 2i6l_A Mitogen-activated prote 100.0 5.6E-40 1.9E-44 356.2 14.4 287 510-828 10-314 (320)
183 4exu_A Mitogen-activated prote 100.0 6.2E-40 2.1E-44 363.7 15.0 275 510-826 41-330 (371)
184 3q5i_A Protein kinase; CDPK, m 100.0 1.1E-39 3.7E-44 376.7 17.5 258 510-827 35-309 (504)
185 1blx_A Cyclin-dependent kinase 100.0 4.1E-40 1.4E-44 358.4 13.2 295 509-838 9-315 (326)
186 3fme_A Dual specificity mitoge 100.0 1.5E-39 5.1E-44 347.7 17.2 259 510-827 6-274 (290)
187 2wqm_A Serine/threonine-protei 100.0 7.3E-39 2.5E-43 346.1 22.2 262 511-790 32-300 (310)
188 2v62_A Serine/threonine-protei 100.0 7.1E-40 2.4E-44 359.6 14.5 268 510-786 36-327 (345)
189 2w1i_A JAK2; chromosomal rearr 100.0 3E-39 1E-43 351.7 19.2 271 510-788 40-323 (326)
190 1fvr_A Tyrosine-protein kinase 100.0 3.6E-39 1.2E-43 351.3 19.8 257 511-788 25-301 (327)
191 2b9h_A MAP kinase FUS3, mitoge 100.0 2.5E-39 8.4E-44 356.5 18.5 294 510-828 10-314 (353)
192 3fdn_A Serine/threonine-protei 100.0 2.9E-39 9.9E-44 343.7 18.4 200 510-723 8-211 (279)
193 2yfx_A Tyrosine-protein kinase 100.0 2.7E-39 9.2E-44 352.3 18.5 261 509-787 28-304 (327)
194 1phk_A Phosphorylase kinase; g 100.0 4.2E-39 1.4E-43 345.8 19.6 259 510-827 16-291 (298)
195 2pml_X PFPK7, Ser/Thr protein 100.0 7.2E-40 2.4E-44 360.0 13.8 275 510-827 30-330 (348)
196 2j7t_A Serine/threonine-protei 100.0 2.2E-39 7.6E-44 348.6 17.1 259 510-828 18-284 (302)
197 3mdy_A Bone morphogenetic prot 100.0 1.2E-38 4.2E-43 348.4 23.1 265 504-788 30-332 (337)
198 3nyv_A Calmodulin-domain prote 100.0 7.1E-40 2.4E-44 376.6 13.8 259 509-827 24-289 (484)
199 3mwu_A Calmodulin-domain prote 100.0 1.3E-39 4.5E-44 374.4 16.0 260 509-828 20-285 (486)
200 4hgt_A Casein kinase I isoform 100.0 4.7E-39 1.6E-43 344.9 19.2 270 509-790 7-283 (296)
201 3hko_A Calcium/calmodulin-depe 100.0 3.8E-39 1.3E-43 353.8 18.9 272 505-828 20-339 (345)
202 4fl3_A Tyrosine-protein kinase 100.0 4.3E-39 1.5E-43 379.8 20.5 251 517-787 375-631 (635)
203 3g2f_A Bone morphogenetic prot 100.0 5.8E-39 2E-43 351.0 20.0 269 510-792 12-323 (336)
204 3e3p_A Protein kinase, putativ 100.0 2.7E-39 9.2E-44 357.2 17.4 297 504-831 16-326 (360)
205 3uzp_A CKI-delta, CKID, casein 100.0 1.3E-38 4.3E-43 341.6 22.1 270 510-791 8-284 (296)
206 2zmd_A Dual specificity protei 100.0 9.4E-39 3.2E-43 356.2 21.7 250 511-781 56-321 (390)
207 1u5q_A Serine/threonine protei 100.0 6.3E-39 2.1E-43 351.9 19.8 198 510-723 53-257 (348)
208 4eut_A Serine/threonine-protei 100.0 4.6E-39 1.6E-43 359.9 18.8 268 510-788 8-310 (396)
209 2eu9_A Dual specificity protei 100.0 2.4E-39 8.2E-44 356.5 16.2 291 510-828 18-342 (355)
210 2ycf_A Serine/threonine-protei 100.0 2E-39 6.9E-44 352.5 15.3 200 509-722 8-222 (322)
211 3e7e_A HBUB1, BUB1A, mitotic c 100.0 1.8E-38 6.3E-43 351.2 22.8 254 509-788 63-340 (365)
212 2h34_A Serine/threonine-protei 100.0 7.7E-39 2.6E-43 345.7 19.2 259 510-787 33-296 (309)
213 2buj_A Serine/threonine-protei 100.0 1.9E-38 6.4E-43 343.9 22.1 269 509-788 27-307 (317)
214 2clq_A Mitogen-activated prote 100.0 2.1E-38 7.3E-43 339.7 22.0 201 512-722 23-228 (295)
215 1q8y_A SR protein kinase; tran 100.0 1.5E-39 5.2E-44 361.0 13.4 290 510-828 18-342 (373)
216 3dls_A PAS domain-containing s 100.0 5E-39 1.7E-43 351.0 17.0 200 509-721 22-232 (335)
217 2w5a_A Serine/threonine-protei 100.0 4.9E-39 1.7E-43 341.7 16.3 207 510-723 5-220 (279)
218 3q60_A ROP5B; pseudokinase, tr 100.0 2.4E-39 8E-44 359.2 14.3 259 511-825 62-358 (371)
219 2vgo_A Serine/threonine-protei 100.0 1.3E-38 4.4E-43 339.6 18.2 254 510-827 13-270 (284)
220 3a7i_A MST3 kinase, serine/thr 100.0 1.9E-38 6.7E-43 341.5 19.7 201 510-723 21-223 (303)
221 2wtk_C Serine/threonine-protei 100.0 4.7E-38 1.6E-42 338.8 21.7 252 510-781 4-264 (305)
222 3coi_A Mitogen-activated prote 100.0 4.9E-39 1.7E-43 354.2 14.2 275 511-826 24-312 (353)
223 2h6d_A 5'-AMP-activated protei 100.0 2.3E-38 8E-43 336.0 18.0 200 510-722 10-214 (276)
224 1b6c_B TGF-B superfamily recep 100.0 1.4E-37 4.9E-42 340.8 24.4 267 502-788 33-337 (342)
225 3sv0_A Casein kinase I-like; t 100.0 3.5E-38 1.2E-42 359.2 20.2 269 510-790 6-281 (483)
226 3fhr_A MAP kinase-activated pr 100.0 3.6E-39 1.2E-43 352.5 11.5 261 509-827 26-295 (336)
227 3ll6_A Cyclin G-associated kin 100.0 3.3E-38 1.1E-42 344.8 18.9 266 509-790 26-311 (337)
228 1u46_A ACK-1, activated CDC42 100.0 2.9E-38 1E-42 337.9 18.0 260 510-787 17-284 (291)
229 2x7f_A TRAF2 and NCK-interacti 100.0 1.5E-38 5.1E-43 346.1 15.5 209 504-723 17-238 (326)
230 2j0j_A Focal adhesion kinase 1 100.0 4.9E-38 1.7E-42 372.1 20.9 262 505-787 384-651 (656)
231 3gxj_A TGF-beta receptor type- 100.0 4.3E-40 1.5E-44 354.2 3.0 260 510-787 2-297 (303)
232 3an0_A Dual specificity mitoge 100.0 4E-38 1.4E-42 345.0 18.1 204 509-724 49-262 (340)
233 3com_A Serine/threonine-protei 100.0 1.5E-37 5.1E-42 336.4 21.3 202 509-723 27-229 (314)
234 2vwi_A Serine/threonine-protei 100.0 2.2E-38 7.6E-43 340.8 14.4 276 507-827 11-295 (303)
235 2rio_A Serine/threonine-protei 100.0 7.5E-38 2.6E-42 354.0 18.6 201 512-722 16-243 (434)
236 3cek_A Dual specificity protei 100.0 8E-38 2.8E-42 338.4 17.4 212 501-724 18-244 (313)
237 3a99_A Proto-oncogene serine/t 100.0 3.6E-39 1.2E-43 350.1 6.3 251 508-828 40-302 (320)
238 3qa8_A MGC80376 protein; kinas 100.0 1E-37 3.6E-42 362.5 17.4 204 510-724 13-228 (676)
239 2y4i_B KSR2, HKSR2, kinase sup 100.0 1.8E-38 6.2E-43 344.4 9.7 267 503-788 25-303 (319)
240 3p23_A Serine/threonine-protei 100.0 2.6E-37 9E-42 348.5 18.6 201 510-722 23-233 (432)
241 1zy4_A Serine/threonine-protei 100.0 6.3E-37 2.1E-41 329.2 20.7 200 510-714 5-226 (303)
242 3aln_A Dual specificity mitoge 100.0 4.5E-37 1.5E-41 334.7 18.5 202 510-723 21-233 (327)
243 2iwi_A Serine/threonine-protei 100.0 3.3E-37 1.1E-41 333.4 15.8 202 506-721 26-241 (312)
244 2wei_A Calmodulin-domain prote 100.0 1.2E-36 4.2E-41 324.8 18.8 201 509-723 20-226 (287)
245 2dyl_A Dual specificity mitoge 100.0 3.9E-37 1.3E-41 333.6 14.7 202 510-724 24-234 (318)
246 2vuw_A Serine/threonine-protei 100.0 3.7E-37 1.3E-41 336.7 8.6 191 510-720 19-278 (336)
247 3dzo_A Rhoptry kinase domain; 100.0 6E-37 2.1E-41 344.3 6.4 198 511-723 78-321 (413)
248 3uqc_A Probable conserved tran 100.0 5.6E-35 1.9E-39 311.4 19.1 229 510-787 30-265 (286)
249 3m2w_A MAP kinase-activated pr 100.0 1.2E-34 4.3E-39 311.2 20.0 239 511-828 17-265 (299)
250 2pzi_A Probable serine/threoni 100.0 6.2E-35 2.1E-39 348.9 17.4 239 510-786 79-327 (681)
251 3v47_A TOLL-like receptor 5B a 100.0 2.6E-33 8.8E-38 319.5 23.4 280 2-287 39-424 (455)
252 2id5_A Lingo-1, leucine rich r 100.0 5E-33 1.7E-37 319.2 21.4 278 2-285 41-346 (477)
253 3rgz_A Protein brassinosteroid 100.0 8.7E-33 3E-37 335.2 20.4 267 2-274 377-719 (768)
254 3rgz_A Protein brassinosteroid 100.0 3.6E-32 1.2E-36 329.8 22.0 266 2-273 403-741 (768)
255 3zyj_A Leucine-rich repeat-con 100.0 3.9E-31 1.3E-35 300.0 26.1 260 17-286 43-306 (440)
256 3zyi_A Leucine-rich repeat-con 100.0 3.4E-31 1.2E-35 301.5 24.4 259 18-286 55-317 (452)
257 1ogq_A PGIP-2, polygalacturona 100.0 1.8E-32 6.2E-37 296.1 13.2 252 17-276 50-308 (313)
258 3t6q_A CD180 antigen; protein- 100.0 7.6E-32 2.6E-36 318.9 19.3 280 2-288 263-576 (606)
259 4g8a_A TOLL-like receptor 4; l 100.0 3.6E-31 1.2E-35 314.6 24.2 295 1-303 60-609 (635)
260 3vq2_A TLR4, TOLL-like recepto 100.0 6.3E-31 2.1E-35 311.1 25.6 161 136-303 422-587 (606)
261 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 2.9E-30 9.9E-35 302.3 24.4 273 2-286 61-525 (562)
262 3j0a_A TOLL-like receptor 5; m 100.0 1.5E-30 5.2E-35 318.8 21.0 272 3-287 276-575 (844)
263 2z7x_B TOLL-like receptor 1, v 100.0 1.3E-30 4.5E-35 302.4 19.0 168 111-287 322-497 (520)
264 1ziw_A TOLL-like receptor 3; i 100.0 8.9E-30 3E-34 305.4 26.5 273 12-289 324-640 (680)
265 3o6n_A APL1; leucine-rich repe 100.0 6.6E-30 2.3E-34 285.2 22.4 273 3-285 55-365 (390)
266 3oja_B Anopheles plasmodium-re 100.0 1.5E-29 5E-34 298.2 22.0 273 2-284 60-370 (597)
267 4eco_A Uncharacterized protein 100.0 3.9E-30 1.3E-34 305.0 15.3 262 1-272 191-501 (636)
268 2z80_A TOLL-like receptor 2, v 100.0 2.5E-30 8.5E-35 284.6 11.4 279 2-290 40-333 (353)
269 4ecn_A Leucine-rich repeat pro 100.0 8.9E-30 3.1E-34 307.3 16.3 235 33-272 440-710 (876)
270 2z63_A TOLL-like receptor 4, v 100.0 5.7E-29 2E-33 292.0 21.7 128 157-289 417-549 (570)
271 2z66_A Variable lymphocyte rec 100.0 6.3E-29 2.2E-33 267.6 18.9 258 20-286 10-275 (306)
272 4eco_A Uncharacterized protein 100.0 1E-28 3.4E-33 292.9 21.4 258 2-273 314-601 (636)
273 2ft3_A Biglycan; proteoglycan, 100.0 7.2E-28 2.5E-32 262.5 26.0 256 3-273 43-308 (332)
274 1xku_A Decorin; proteoglycan, 100.0 9.1E-28 3.1E-32 261.5 26.6 257 3-273 41-307 (330)
275 3v47_A TOLL-like receptor 5B a 100.0 4E-28 1.4E-32 276.5 23.2 260 2-271 19-359 (455)
276 4ecn_A Leucine-rich repeat pro 100.0 2.3E-28 8E-33 294.9 20.8 260 8-273 480-767 (876)
277 1ogq_A PGIP-2, polygalacturona 100.0 4.3E-29 1.5E-33 269.6 12.7 242 2-251 59-306 (313)
278 2z81_A CD282 antigen, TOLL-lik 100.0 3.3E-28 1.1E-32 284.2 20.3 122 157-286 383-525 (549)
279 1xku_A Decorin; proteoglycan, 100.0 2.3E-27 8E-32 258.2 24.5 261 2-270 61-330 (330)
280 4fcg_A Uncharacterized protein 100.0 6.6E-28 2.3E-32 261.9 19.7 228 16-253 80-317 (328)
281 2ft3_A Biglycan; proteoglycan, 100.0 1.8E-27 6.1E-32 259.4 23.0 260 2-270 63-331 (332)
282 2id5_A Lingo-1, leucine rich r 100.0 1.4E-27 4.9E-32 273.7 22.3 260 3-271 21-284 (477)
283 4azs_A Methyltransferase WBDD; 100.0 1.2E-29 4.2E-34 294.7 4.8 185 518-718 241-437 (569)
284 1ozn_A Reticulon 4 receptor; N 100.0 1.8E-27 6E-32 253.5 21.1 237 19-286 13-252 (285)
285 3t6q_A CD180 antigen; protein- 100.0 3.2E-27 1.1E-31 279.3 25.1 249 18-273 255-514 (606)
286 2z7x_B TOLL-like receptor 1, v 100.0 1.1E-27 3.7E-32 277.8 19.1 115 158-272 321-457 (520)
287 3vq2_A TLR4, TOLL-like recepto 99.9 3.5E-27 1.2E-31 279.0 22.9 125 2-126 41-166 (606)
288 3zyj_A Leucine-rich repeat-con 99.9 7.3E-27 2.5E-31 264.8 24.4 241 3-252 53-294 (440)
289 3zyi_A Leucine-rich repeat-con 99.9 5.1E-27 1.7E-31 267.1 23.1 242 3-253 64-306 (452)
290 1ziw_A TOLL-like receptor 3; i 99.9 5.2E-27 1.8E-31 281.4 23.8 268 2-270 34-364 (680)
291 3j0a_A TOLL-like receptor 5; m 99.9 5E-27 1.7E-31 287.6 22.6 266 2-273 33-376 (844)
292 3o6n_A APL1; leucine-rich repe 99.9 6.1E-27 2.1E-31 261.1 19.9 246 15-272 43-308 (390)
293 1p9a_G Platelet glycoprotein I 99.9 2.7E-26 9.2E-31 244.6 20.6 217 36-288 5-224 (290)
294 2z81_A CD282 antigen, TOLL-lik 99.9 2.3E-27 7.8E-32 277.1 13.3 173 2-175 35-210 (549)
295 3oja_B Anopheles plasmodium-re 99.9 1.3E-26 4.5E-31 273.0 19.4 246 15-272 49-314 (597)
296 1wwl_A Monocyte differentiatio 99.9 4.8E-28 1.6E-32 261.4 5.7 246 13-272 39-309 (312)
297 4fcg_A Uncharacterized protein 99.9 3.7E-26 1.3E-30 248.2 19.6 214 2-221 90-314 (328)
298 4fmz_A Internalin; leucine ric 99.9 9.7E-26 3.3E-30 247.2 22.9 251 2-275 75-327 (347)
299 3a79_B TLR6, VLRB.59, TOLL-lik 99.9 4.5E-26 1.5E-30 266.7 21.4 256 2-272 40-441 (562)
300 1ozn_A Reticulon 4 receptor; N 99.9 1.1E-25 3.7E-30 239.7 21.9 220 2-225 20-242 (285)
301 2z62_A TOLL-like receptor 4, v 99.9 4.6E-26 1.6E-30 241.4 17.9 234 22-288 12-254 (276)
302 2z62_A TOLL-like receptor 4, v 99.9 8.5E-26 2.9E-30 239.3 19.6 216 8-225 21-241 (276)
303 4g8a_A TOLL-like receptor 4; l 99.9 2.5E-25 8.6E-30 264.2 24.7 146 4-152 42-187 (635)
304 3oja_A Leucine-rich immune mol 99.9 3.3E-27 1.1E-31 270.4 6.6 197 18-228 35-233 (487)
305 2z80_A TOLL-like receptor 2, v 99.9 2.2E-26 7.6E-31 253.0 12.1 245 2-253 61-317 (353)
306 1wwl_A Monocyte differentiatio 99.9 4.2E-26 1.4E-30 246.2 13.3 236 2-252 52-311 (312)
307 2z66_A Variable lymphocyte rec 99.9 1.5E-25 5.2E-30 241.1 17.5 242 3-253 17-264 (306)
308 4fmz_A Internalin; leucine ric 99.9 1.3E-24 4.5E-29 238.2 24.9 248 2-272 53-300 (347)
309 3bz5_A Internalin-J, INLJ; leu 99.9 2.9E-24 1E-28 243.7 27.7 203 2-228 51-253 (457)
310 2z63_A TOLL-like receptor 4, v 99.9 3.7E-25 1.3E-29 259.5 19.9 258 4-272 18-338 (570)
311 3o53_A Protein LRIM1, AGAP0063 99.9 2.6E-26 8.8E-31 248.4 9.1 244 17-279 10-257 (317)
312 2o6q_A Variable lymphocyte rec 99.9 1.7E-24 5.6E-29 228.6 22.5 191 66-285 38-232 (270)
313 1o6v_A Internalin A; bacterial 99.9 1.6E-24 5.5E-29 247.4 23.6 251 2-274 77-346 (466)
314 1o6v_A Internalin A; bacterial 99.9 2E-24 6.9E-29 246.6 24.0 250 2-273 55-323 (466)
315 3bz5_A Internalin-J, INLJ; leu 99.9 3.6E-24 1.2E-28 243.1 25.6 238 4-271 29-266 (457)
316 3en9_A Glycoprotease, O-sialog 99.9 3.2E-26 1.1E-30 264.5 6.4 190 514-719 339-538 (540)
317 3o53_A Protein LRIM1, AGAP0063 99.9 1.4E-25 4.9E-30 242.5 9.8 243 9-270 26-273 (317)
318 1jl5_A Outer protein YOPM; leu 99.9 3.5E-24 1.2E-28 242.9 19.3 242 2-273 20-291 (454)
319 3oja_A Leucine-rich immune mol 99.9 3.2E-25 1.1E-29 253.9 10.6 220 38-276 31-254 (487)
320 1jl5_A Outer protein YOPM; leu 99.9 9.5E-23 3.2E-27 231.1 28.0 240 2-272 100-350 (454)
321 3g06_A SSPH2 (leucine-rich rep 99.9 8.6E-23 2.9E-27 238.7 28.2 232 2-273 49-298 (622)
322 1p9a_G Platelet glycoprotein I 99.9 7.3E-23 2.5E-27 218.0 22.8 202 12-222 5-209 (290)
323 3rfs_A Internalin B, repeat mo 99.9 2.9E-23 1E-27 219.2 18.1 205 14-230 38-244 (272)
324 2o6q_A Variable lymphocyte rec 99.9 2.8E-22 9.7E-27 211.4 23.6 204 17-224 16-221 (270)
325 4glp_A Monocyte differentiatio 99.9 3.7E-23 1.3E-27 222.8 14.0 225 17-251 64-308 (310)
326 1h6u_A Internalin H; cell adhe 99.9 1.1E-22 3.9E-27 218.7 16.9 195 13-222 37-231 (308)
327 3rfs_A Internalin B, repeat mo 99.9 1.4E-22 4.8E-27 214.0 17.0 197 2-209 50-247 (272)
328 3m19_A Variable lymphocyte rec 99.9 8.3E-22 2.8E-26 205.4 20.3 129 42-174 15-144 (251)
329 1zar_A RIO2 kinase; serine kin 99.9 5.3E-23 1.8E-27 217.8 11.0 154 503-693 82-253 (282)
330 4glp_A Monocyte differentiatio 99.9 5.8E-23 2E-27 221.4 11.3 222 41-272 64-307 (310)
331 3cvr_A Invasion plasmid antige 99.9 3.7E-22 1.3E-26 230.5 18.7 224 18-284 60-292 (571)
332 2xwt_C Thyrotropin receptor; s 99.9 3.7E-22 1.3E-26 206.4 16.2 194 42-247 32-236 (239)
333 3m19_A Variable lymphocyte rec 99.9 1.5E-21 5.2E-26 203.4 20.4 182 17-225 14-196 (251)
334 3goz_A Leucine-rich repeat-con 99.9 4.3E-24 1.5E-28 235.4 -1.4 251 2-252 7-299 (362)
335 2xwt_C Thyrotropin receptor; s 99.9 4.2E-22 1.4E-26 206.0 13.6 201 8-218 25-236 (239)
336 4ay9_X Follicle-stimulating ho 99.9 8.1E-22 2.8E-26 216.1 15.8 243 20-276 12-262 (350)
337 3g06_A SSPH2 (leucine-rich rep 99.9 1.5E-20 5E-25 219.8 27.0 215 17-272 40-254 (622)
338 2ca6_A RAN GTPase-activating p 99.9 5.1E-24 1.8E-28 237.1 -3.7 242 8-253 23-319 (386)
339 1z7x_W Ribonuclease inhibitor; 99.9 1.7E-24 5.8E-29 247.0 -9.6 255 18-272 86-411 (461)
340 1h6u_A Internalin H; cell adhe 99.9 6.6E-21 2.3E-25 204.8 17.7 214 18-253 20-233 (308)
341 3goz_A Leucine-rich repeat-con 99.8 2.2E-23 7.7E-28 229.7 -3.6 252 21-274 2-299 (362)
342 2o6s_A Variable lymphocyte rec 99.8 1.5E-20 5.2E-25 189.9 16.5 179 20-208 10-189 (208)
343 4ay9_X Follicle-stimulating ho 99.8 1.3E-20 4.6E-25 206.4 16.5 233 2-248 18-257 (350)
344 2ca6_A RAN GTPase-activating p 99.8 4.1E-23 1.4E-27 229.8 -6.4 256 19-275 11-319 (386)
345 1z7x_W Ribonuclease inhibitor; 99.8 2.8E-23 9.6E-28 236.8 -9.0 267 2-273 12-327 (461)
346 2v9t_B SLIT homolog 2 protein 99.8 4.3E-20 1.5E-24 188.2 14.6 146 90-286 33-179 (220)
347 2ast_B S-phase kinase-associat 99.8 4.8E-22 1.6E-26 216.7 -0.3 222 18-247 48-282 (336)
348 2xot_A Amphoterin-induced prot 99.8 3.1E-20 1.1E-24 204.4 12.7 188 44-285 21-216 (361)
349 2o6s_A Variable lymphocyte rec 99.8 1.5E-19 5.1E-24 182.5 16.1 170 3-182 17-186 (208)
350 3cvr_A Invasion plasmid antige 99.8 5.1E-20 1.7E-24 212.6 14.0 182 42-273 60-244 (571)
351 2ast_B S-phase kinase-associat 99.8 7.5E-22 2.6E-26 215.1 -1.3 236 10-254 61-310 (336)
352 2v70_A SLIT-2, SLIT homolog 2 99.8 1.6E-19 5.6E-24 183.9 14.0 163 93-285 15-179 (220)
353 1h6t_A Internalin B; cell adhe 99.8 1.9E-19 6.4E-24 191.8 12.1 191 17-222 24-214 (291)
354 1m9s_A Internalin B; cell inva 99.8 4.6E-19 1.6E-23 206.9 15.0 194 16-224 20-213 (605)
355 1h6t_A Internalin B; cell adhe 99.8 4.3E-19 1.5E-23 189.0 13.4 192 42-253 25-216 (291)
356 3e6j_A Variable lymphocyte rec 99.8 1E-18 3.5E-23 179.1 15.7 164 68-286 22-187 (229)
357 2v9t_B SLIT homolog 2 protein 99.8 2.1E-18 7.2E-23 175.6 17.0 151 20-174 14-165 (220)
358 1m9s_A Internalin B; cell inva 99.8 3.5E-19 1.2E-23 207.9 11.4 175 13-200 39-213 (605)
359 2v70_A SLIT-2, SLIT homolog 2 99.8 2.9E-18 1E-22 174.6 16.2 153 19-175 13-167 (220)
360 3e6j_A Variable lymphocyte rec 99.8 5.4E-18 1.8E-22 173.8 18.1 152 18-174 20-172 (229)
361 1zth_A RIO1 serine protein kin 99.8 8.5E-19 2.9E-23 183.2 12.2 136 513-662 49-219 (258)
362 2xot_A Amphoterin-induced prot 99.8 1.8E-18 6.2E-23 190.2 12.8 152 19-174 20-176 (361)
363 4ezg_A Putative uncharacterize 99.8 2.2E-18 7.5E-23 172.3 11.5 153 14-174 41-194 (197)
364 1dce_A Protein (RAB geranylger 99.7 6.5E-21 2.2E-25 221.2 -10.1 190 14-225 346-550 (567)
365 1xeu_A Internalin C; cellular 99.7 2.8E-18 9.6E-23 179.8 8.8 171 15-223 17-187 (263)
366 1xeu_A Internalin C; cellular 99.7 8.9E-18 3E-22 176.0 11.5 160 2-176 28-187 (263)
367 4ezg_A Putative uncharacterize 99.7 2.1E-17 7E-22 165.3 11.4 153 38-221 41-194 (197)
368 4b8c_D Glucose-repressible alc 99.7 1.9E-18 6.4E-23 206.8 4.0 190 17-218 173-369 (727)
369 1dce_A Protein (RAB geranylger 99.7 9E-20 3.1E-24 211.6 -10.2 201 38-266 346-567 (567)
370 4b8c_D Glucose-repressible alc 99.7 3.7E-18 1.3E-22 204.3 3.0 161 23-194 207-369 (727)
371 2wfh_A SLIT homolog 2 protein 99.7 1.2E-16 4.2E-21 158.9 12.5 139 116-286 13-153 (193)
372 1w8a_A SLIT protein; signaling 99.7 6.7E-17 2.3E-21 160.8 9.4 127 20-150 11-138 (192)
373 2ell_A Acidic leucine-rich nuc 99.7 1.6E-16 5.6E-21 154.2 11.1 136 41-179 24-164 (168)
374 1w8a_A SLIT protein; signaling 99.7 7.1E-16 2.4E-20 153.3 14.0 131 44-178 11-143 (192)
375 4gyi_A RIO2 kinase; protein ki 99.6 1.1E-16 3.7E-21 173.5 8.2 139 511-662 95-265 (397)
376 2ell_A Acidic leucine-rich nuc 99.6 3.8E-16 1.3E-20 151.7 10.5 138 15-156 22-165 (168)
377 3ogk_B Coronatine-insensitive 99.6 7.3E-18 2.5E-22 198.4 -6.2 82 15-97 162-251 (592)
378 2wfh_A SLIT homolog 2 protein 99.6 4.3E-15 1.5E-19 147.7 14.6 107 66-174 32-139 (193)
379 2je0_A Acidic leucine-rich nuc 99.6 4.2E-16 1.4E-20 148.1 6.7 127 17-146 17-148 (149)
380 3ogk_B Coronatine-insensitive 99.6 5E-18 1.7E-22 199.7 -10.0 264 2-271 173-500 (592)
381 2je0_A Acidic leucine-rich nuc 99.6 8.5E-16 2.9E-20 146.0 7.0 130 39-170 15-149 (149)
382 2o6r_A Variable lymphocyte rec 99.6 1.6E-14 5.4E-19 141.5 15.5 131 44-178 10-141 (177)
383 3sb4_A Hypothetical leucine ri 99.6 5.3E-16 1.8E-20 168.2 4.6 239 16-265 24-327 (329)
384 2o6r_A Variable lymphocyte rec 99.6 1.7E-14 5.9E-19 141.2 14.8 126 68-198 10-138 (177)
385 3sb4_A Hypothetical leucine ri 99.6 4.2E-15 1.5E-19 161.1 10.7 216 16-235 48-324 (329)
386 4fdw_A Leucine rich hypothetic 99.5 1.7E-13 5.7E-18 152.0 20.9 250 3-270 122-381 (401)
387 1a9n_A U2A', U2A'; complex (nu 99.5 7.1E-15 2.4E-19 143.8 7.8 132 37-174 15-153 (176)
388 3g39_A Variable lymphocyte rec 99.5 2E-14 6.9E-19 139.7 9.7 122 163-291 11-135 (170)
389 1a9n_A U2A', U2A'; complex (nu 99.5 9.2E-15 3.2E-19 143.0 6.9 135 11-152 13-154 (176)
390 4fdw_A Leucine rich hypothetic 99.5 3.7E-13 1.3E-17 149.3 17.5 233 3-251 144-384 (401)
391 2p1m_B Transport inhibitor res 99.5 9.4E-16 3.2E-20 180.4 -3.7 86 15-100 103-195 (594)
392 2r9u_A Variable lymphocyte rec 99.5 6.7E-14 2.3E-18 136.5 9.6 119 164-289 15-136 (174)
393 1ds9_A Outer arm dynein; leuci 99.5 9.9E-17 3.4E-21 160.4 -11.4 155 13-174 14-185 (198)
394 2p1m_B Transport inhibitor res 99.5 9.3E-16 3.2E-20 180.4 -6.6 179 87-271 287-493 (594)
395 3g39_A Variable lymphocyte rec 99.4 5.1E-13 1.8E-17 129.7 12.5 105 19-126 11-115 (170)
396 2r9u_A Variable lymphocyte rec 99.4 9.9E-13 3.4E-17 128.1 12.5 103 20-125 15-117 (174)
397 1ds9_A Outer arm dynein; leuci 99.4 1.7E-15 5.7E-20 151.5 -7.9 143 2-152 27-186 (198)
398 2ifg_A High affinity nerve gro 99.3 1.9E-12 6.5E-17 141.2 9.4 112 185-304 32-145 (347)
399 3tm0_A Aminoglycoside 3'-phosp 99.3 1.5E-11 5E-16 128.5 11.9 144 509-660 12-212 (263)
400 2ifg_A High affinity nerve gro 99.2 8.9E-12 3.1E-16 135.9 8.3 105 20-127 11-117 (347)
401 3un9_A NLR family member X1; l 99.2 4.1E-14 1.4E-18 155.4 -11.3 142 89-231 101-262 (372)
402 3un9_A NLR family member X1; l 99.2 2.7E-13 9.3E-18 148.9 -6.6 141 65-205 101-260 (372)
403 1nd4_A Aminoglycoside 3'-phosp 99.1 1.5E-10 5.1E-15 120.4 9.3 129 520-661 29-214 (264)
404 4fs7_A Uncharacterized protein 99.1 2.2E-09 7.4E-14 119.1 17.6 253 4-269 58-376 (394)
405 3dxp_A Putative acyl-COA dehyd 99.0 1.6E-09 5.6E-14 118.5 10.8 141 516-661 43-248 (359)
406 4gt6_A Cell surface protein; l 98.9 5.9E-08 2E-12 107.5 20.0 254 5-271 51-369 (394)
407 3sg8_A APH(2'')-ID; antibiotic 98.9 2.9E-09 1E-13 113.6 8.3 192 516-719 25-287 (304)
408 4fs7_A Uncharacterized protein 98.9 2.4E-08 8.1E-13 110.7 15.8 185 28-220 58-265 (394)
409 2ra8_A Uncharacterized protein 98.8 5E-10 1.7E-14 121.8 -0.9 134 85-223 168-322 (362)
410 2ra8_A Uncharacterized protein 98.7 2.7E-09 9.4E-14 116.0 0.2 179 35-219 133-341 (362)
411 4gt6_A Cell surface protein; l 98.6 8.6E-07 2.9E-11 98.0 19.7 136 29-170 51-191 (394)
412 3rfe_A Platelet glycoprotein I 98.5 5.8E-08 2E-12 88.9 5.2 70 212-288 12-84 (130)
413 3d1u_A Putative fructosamine-3 98.5 4.4E-07 1.5E-11 95.5 12.3 75 516-594 20-97 (288)
414 3r70_A Aminoglycoside phosphot 98.5 4.8E-07 1.6E-11 97.0 12.5 136 512-661 38-237 (320)
415 4h09_A Hypothetical leucine ri 98.5 3.8E-06 1.3E-10 92.3 20.0 230 8-254 60-326 (379)
416 1io0_A Tropomodulin; LRR prote 98.5 2.1E-08 7.3E-13 98.3 0.4 117 35-151 30-164 (185)
417 3rw6_A Nuclear RNA export fact 98.3 2.8E-08 9.7E-13 102.5 -2.1 105 37-144 137-257 (267)
418 1io0_A Tropomodulin; LRR prote 98.3 3.8E-08 1.3E-12 96.5 -1.2 113 13-125 32-163 (185)
419 3tdw_A Gentamicin resistance p 98.3 3.6E-06 1.2E-10 89.5 13.9 136 516-661 24-224 (306)
420 4gkh_A Aminoglycoside 3'-phosp 98.3 3.4E-06 1.2E-10 87.9 13.0 135 518-661 31-223 (272)
421 3rw6_A Nuclear RNA export fact 98.2 9.8E-08 3.3E-12 98.4 -1.2 106 61-167 137-257 (267)
422 4h09_A Hypothetical leucine ri 98.2 4.7E-05 1.6E-09 83.4 18.3 232 4-253 79-348 (379)
423 3ovc_A Hygromycin-B 4-O-kinase 98.2 9E-06 3.1E-10 88.5 12.2 140 516-661 46-243 (362)
424 3ats_A Putative uncharacterize 98.1 2.7E-06 9.3E-11 92.6 7.8 79 517-595 26-121 (357)
425 2olc_A MTR kinase, methylthior 97.9 5.4E-05 1.8E-09 83.5 11.7 75 516-592 35-120 (397)
426 2q83_A YTAA protein; 2635576, 97.8 0.00013 4.3E-09 78.6 13.7 140 517-661 38-252 (346)
427 3f7w_A Putative fructosamine-3 97.8 5.8E-05 2E-09 79.3 10.3 79 512-594 16-97 (288)
428 3e4g_A ATP synthase subunit S, 97.8 7.1E-06 2.4E-10 78.4 2.3 83 42-124 62-150 (176)
429 3jr1_A Putative fructosamine-3 97.7 0.00015 5.3E-09 76.6 11.9 137 516-657 41-232 (312)
430 3e4g_A ATP synthase subunit S, 97.6 9E-06 3.1E-10 77.7 0.6 82 18-99 62-149 (176)
431 2pyw_A Uncharacterized protein 97.5 0.0004 1.4E-08 77.1 11.9 73 516-591 39-122 (420)
432 1pgv_A TMD-1, tropomodulin TMD 97.4 3.9E-05 1.3E-09 74.7 1.6 88 62-149 67-168 (197)
433 3csv_A Aminoglycoside phosphot 97.2 0.00099 3.4E-08 71.3 10.7 140 517-661 24-217 (333)
434 2ppq_A HSK, HK, homoserine kin 97.2 0.0022 7.5E-08 68.2 12.8 157 501-660 7-216 (322)
435 1pgv_A TMD-1, tropomodulin TMD 97.2 0.00011 3.7E-09 71.6 1.9 42 85-126 66-111 (197)
436 1zyl_A Hypothetical protein YI 97.0 0.0085 2.9E-07 63.7 15.0 141 517-661 32-223 (328)
437 3dxq_A Choline/ethanolamine ki 97.0 0.0015 5.1E-08 68.8 8.9 71 516-594 23-95 (301)
438 1nw1_A Choline kinase (49.2 KD 97.0 0.0021 7.3E-08 71.3 10.3 73 516-594 78-159 (429)
439 3feg_A Choline/ethanolamine ki 97.0 0.0016 5.3E-08 70.8 8.8 140 517-661 56-254 (379)
440 2qg7_A Ethanolamine kinase PV0 96.6 0.0075 2.6E-07 67.2 11.0 74 516-594 113-188 (458)
441 3rfe_A Platelet glycoprotein I 96.5 0.0037 1.3E-07 56.7 6.6 56 165-221 12-68 (130)
442 3c5i_A Choline kinase; choline 96.4 0.0029 9.7E-08 68.8 6.1 73 517-594 39-121 (369)
443 3i1a_A Spectinomycin phosphotr 96.3 0.028 9.5E-07 60.1 12.9 68 520-594 32-108 (339)
444 3f2s_A CK, chetk-alpha, cholin 95.9 0.029 9.9E-07 61.1 10.9 140 517-660 58-279 (401)
445 4b9d_A Serine/threonine-protei 95.7 0.0015 5E-08 70.1 -0.7 59 766-826 221-283 (350)
446 3fdn_A Serine/threonine-protei 95.6 0.002 7E-08 66.7 -0.2 63 766-828 203-266 (279)
447 2yle_A Protein spire homolog 1 95.5 0.085 2.9E-06 51.5 10.9 100 592-715 33-132 (229)
448 2h6d_A 5'-AMP-activated protei 94.8 0.0026 9E-08 65.7 -2.1 63 766-828 207-270 (276)
449 3mes_A Choline kinase; malaria 94.6 0.1 3.5E-06 57.3 9.8 73 517-594 76-157 (424)
450 2k1k_A Ephrin type-A receptor 94.4 0.021 7E-07 38.8 2.3 27 441-467 5-31 (38)
451 2vgo_A Serine/threonine-protei 94.3 0.0084 2.9E-07 62.2 0.2 13 767-779 209-221 (284)
452 2wtk_C Serine/threonine-protei 94.1 0.0084 2.9E-07 62.8 -0.3 63 766-828 209-272 (305)
453 3hko_A Calcium/calmodulin-depe 93.8 0.0076 2.6E-07 64.5 -1.4 12 768-779 274-285 (345)
454 1zy4_A Serine/threonine-protei 93.3 0.01 3.5E-07 61.9 -1.2 31 796-826 260-290 (303)
455 3m2w_A MAP kinase-activated pr 93.3 0.0044 1.5E-07 65.0 -4.1 32 750-781 226-257 (299)
456 3qd2_B Eukaryotic translation 93.0 0.0074 2.5E-07 64.0 -3.0 28 798-825 304-331 (332)
457 2vwi_A Serine/threonine-protei 92.6 0.0076 2.6E-07 63.0 -3.5 34 748-781 255-288 (303)
458 3com_A Serine/threonine-protei 92.5 0.04 1.4E-06 57.8 2.0 34 795-828 254-287 (314)
459 2wei_A Calmodulin-domain prote 92.4 0.017 5.8E-07 60.0 -1.2 33 794-826 251-283 (287)
460 2clq_A Mitogen-activated prote 92.0 0.022 7.5E-07 59.2 -0.9 30 798-827 257-286 (295)
461 3dbq_A Dual specificity protei 91.9 0.015 5.2E-07 62.2 -2.3 33 795-827 249-281 (343)
462 3dls_A PAS domain-containing s 91.8 0.017 5.8E-07 61.7 -2.1 30 798-827 253-282 (335)
463 2iwi_A Serine/threonine-protei 91.5 0.012 4E-07 62.0 -3.7 36 793-828 257-292 (312)
464 2ks1_B Epidermal growth factor 91.3 0.26 8.9E-06 34.5 4.2 18 447-464 11-28 (44)
465 3cek_A Dual specificity protei 91.3 0.019 6.4E-07 60.5 -2.4 31 798-828 271-301 (313)
466 2l2t_A Receptor tyrosine-prote 91.0 0.19 6.6E-06 35.1 3.3 17 448-464 11-27 (44)
467 3an0_A Dual specificity mitoge 90.8 0.018 6.2E-07 61.4 -3.1 31 798-828 289-319 (340)
468 2zmd_A Dual specificity protei 90.7 0.024 8.3E-07 61.9 -2.3 33 795-827 296-328 (390)
469 2x7f_A TRAF2 and NCK-interacti 90.7 0.019 6.7E-07 60.7 -3.0 31 798-828 265-295 (326)
470 2w5a_A Serine/threonine-protei 90.5 0.055 1.9E-06 55.6 0.4 62 767-828 213-276 (279)
471 2dyl_A Dual specificity mitoge 90.1 0.029 9.8E-07 59.0 -2.2 28 798-825 262-289 (318)
472 3a7i_A MST3 kinase, serine/thr 89.4 0.072 2.5E-06 55.5 0.2 33 796-828 247-279 (303)
473 3g15_A CK, chetk-alpha, cholin 89.3 1.8 6E-05 47.1 11.3 29 633-661 246-280 (401)
474 3aln_A Dual specificity mitoge 89.2 0.021 7.1E-07 60.6 -4.3 28 798-825 264-291 (327)
475 1u5q_A Serine/threonine protei 88.4 0.043 1.5E-06 58.9 -2.5 31 798-828 284-314 (348)
476 2jwa_A Receptor tyrosine-prote 87.2 0.57 1.9E-05 32.7 3.5 8 448-455 13-20 (44)
477 1q8y_A SR protein kinase; tran 77.5 3 0.0001 44.3 6.5 34 748-781 301-334 (373)
478 4euu_A Serine/threonine-protei 77.5 0.18 6.2E-06 52.9 -3.3 26 797-822 280-305 (319)
479 4ann_A ESSB; membrane protein, 77.2 5.7 0.0002 38.6 7.6 115 565-720 43-158 (215)
480 3qup_A Tyrosine-protein kinase 76.9 0.32 1.1E-05 51.0 -1.4 35 794-828 266-307 (323)
481 3hyh_A Carbon catabolite-derep 75.9 0.8 2.7E-05 46.9 1.3 29 753-781 235-263 (275)
482 3cxl_A N-chimerin; SH2, RHO-GA 75.8 0.37 1.3E-05 53.6 -1.4 59 515-576 146-213 (463)
483 2ks1_B Epidermal growth factor 74.2 3.5 0.00012 28.8 3.7 26 447-472 8-33 (44)
484 4fvq_A Tyrosine-protein kinase 73.2 0.73 2.5E-05 47.2 0.1 48 773-820 222-269 (289)
485 3fpq_A Serine/threonine-protei 72.4 0.78 2.7E-05 47.4 0.1 27 754-780 256-282 (290)
486 4ano_A ESSB; membrane protein, 71.8 15 0.00052 35.7 9.1 115 565-720 48-163 (219)
487 2eue_A Carbon catabolite derep 71.6 0.86 3E-05 46.3 0.2 29 753-781 235-263 (275)
488 2l2t_A Receptor tyrosine-prote 70.6 4.6 0.00016 28.2 3.6 25 447-471 7-31 (44)
489 1z57_A Dual specificity protei 70.3 2.1 7.3E-05 44.6 3.0 33 749-781 297-329 (339)
490 1wak_A Serine/threonine-protei 70.1 2.1 7E-05 46.0 2.9 28 798-825 370-397 (397)
491 2k9y_A Ephrin type-A receptor 69.5 2.5 8.6E-05 29.1 2.2 16 449-464 12-27 (41)
492 4g3f_A NF-kappa-beta-inducing 68.9 0.51 1.7E-05 49.9 -2.3 35 791-825 281-328 (336)
493 2vx3_A Dual specificity tyrosi 65.2 3.9 0.00013 43.9 3.8 29 798-826 351-379 (382)
494 2eu9_A Dual specificity protei 65.1 3.1 0.00011 43.7 3.0 31 750-780 303-333 (355)
495 4agu_A Cyclin-dependent kinase 64.2 3 0.0001 43.1 2.5 29 753-781 257-285 (311)
496 3gni_B Strad alpha; kinase fol 63.9 2.2 7.5E-05 45.9 1.5 32 750-781 303-334 (389)
497 3ork_A Serine/threonine protei 63.6 0.68 2.3E-05 48.2 -2.6 33 793-825 247-279 (311)
498 3is5_A Calcium-dependent prote 63.6 3.8 0.00013 41.7 3.2 27 754-780 252-278 (285)
499 3a99_A Proto-oncogene serine/t 63.0 1.7 5.8E-05 45.4 0.3 21 760-780 273-293 (320)
500 4fih_A Serine/threonine-protei 62.7 2.7 9.3E-05 44.5 1.9 30 752-781 295-324 (346)
No 1
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=3.8e-54 Score=458.93 Aligned_cols=262 Identities=30% Similarity=0.488 Sum_probs=222.8
Q ss_pred cCCCCCCcccccCCeeEEEEEeC------CCcEEEEEEeccCChhhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEE
Q 003158 511 NNFNSSTQIGQGGYGKVYKGILP------DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQML 584 (843)
Q Consensus 511 ~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~l 584 (843)
++|.+.+.||+|+||+||+|++. +++.||||+++.......++|.+|+++|++++|||||+++|+|.+++..+|
T Consensus 13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l 92 (299)
T 4asz_A 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIM 92 (299)
T ss_dssp GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEE
Confidence 46778899999999999999863 478899999987776777899999999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHhhcC-----------CCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEE
Q 003158 585 VYEFMSNGTLRDQLSAKS-----------KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKV 653 (843)
Q Consensus 585 V~e~~~~gsL~~~l~~~~-----------~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl 653 (843)
|||||++|+|.++|+..+ ...++|..++.|+.|||+||+|||+++ ||||||||+|||+++++.+||
T Consensus 93 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~---iiHRDlKp~NILl~~~~~~Ki 169 (299)
T 4asz_A 93 VFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQH---FVHRDLATRNCLVGENLLVKI 169 (299)
T ss_dssp EEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEEE
T ss_pred EEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCccCHhhEEECCCCcEEE
Confidence 999999999999997632 356999999999999999999999998 999999999999999999999
Q ss_pred eeccccccCCCCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHh-CCCCCCCCcchHHHHHHH
Q 003158 654 ADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIA 732 (843)
Q Consensus 654 ~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~ellt-g~~pf~~~~~~~~~~~~~ 732 (843)
+|||+|+.....+. ........||+.|||||++.+..++.++|||||||++|||+| |+.||...... +.
T Consensus 170 ~DFGla~~~~~~~~-----~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~-~~---- 239 (299)
T 4asz_A 170 GDFGMSRDVYSTDY-----YRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNN-EV---- 239 (299)
T ss_dssp CCCSCHHHHTGGGC-----EEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHH-HH----
T ss_pred CCcccceecCCCCc-----eeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHH-HH----
Confidence 99999986543211 112233568999999999999999999999999999999999 89999765431 11
Q ss_pred hhcccchhhccCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCC
Q 003158 733 YQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMP 790 (843)
Q Consensus 733 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~ 790 (843)
+..+..+.....|..+++++.+++.+||+.+|++||++.++.+.|+++.+..|
T Consensus 240 -----~~~i~~~~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~~~p 292 (299)
T 4asz_A 240 -----IECITQGRVLQRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAKASP 292 (299)
T ss_dssp -----HHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHSC
T ss_pred -----HHHHHcCCCCCCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhcCC
Confidence 12233445556778888999999999999999999999999999999876544
No 2
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=1.8e-53 Score=460.08 Aligned_cols=261 Identities=29% Similarity=0.484 Sum_probs=216.5
Q ss_pred cCCCCCCcccccCCeeEEEEEeC------CCcEEEEEEeccCChhhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEE
Q 003158 511 NNFNSSTQIGQGGYGKVYKGILP------DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQML 584 (843)
Q Consensus 511 ~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~l 584 (843)
++|...++||+|+||+||+|+++ +++.||||+++.......++|.+|+++|++++|||||+++|+|.+.+..+|
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l 120 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLM 120 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEE
Confidence 45666789999999999999864 478999999987776777899999999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHhhcC-------------CCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcE
Q 003158 585 VYEFMSNGTLRDQLSAKS-------------KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTA 651 (843)
Q Consensus 585 V~e~~~~gsL~~~l~~~~-------------~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~ 651 (843)
|||||++|+|.++++... ..+++|.+++.|+.|||+||+|||+++ ||||||||+|||+++++.+
T Consensus 121 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~---iiHRDLKp~NILl~~~~~~ 197 (329)
T 4aoj_A 121 VFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLH---FVHRDLATRNCLVGQGLVV 197 (329)
T ss_dssp EEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEETTTEE
T ss_pred EEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcCC---eecccccHhhEEECCCCcE
Confidence 999999999999997642 246899999999999999999999998 9999999999999999999
Q ss_pred EEeeccccccCCCCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHh-CCCCCCCCcchHHHHH
Q 003158 652 KVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVN 730 (843)
Q Consensus 652 kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~ellt-g~~pf~~~~~~~~~~~ 730 (843)
||+|||+|+.....+. ........||+.|||||++.+..++.++|||||||++|||+| |+.||...... +..
T Consensus 198 Ki~DFGla~~~~~~~~-----~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~-~~~- 270 (329)
T 4aoj_A 198 KIGDFGMSRDIYSTDY-----YRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNT-EAI- 270 (329)
T ss_dssp EECCCC---------------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHH-HHH-
T ss_pred EEcccccceeccCCCc-----ceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHH-HHH-
Confidence 9999999987643321 122344679999999999999999999999999999999999 89999765432 111
Q ss_pred HHhhcccchhhccCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhC
Q 003158 731 IAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMM 789 (843)
Q Consensus 731 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~ 789 (843)
..+..+.....|..+++++.+++.+||+.+|++||++.++++.|+.+.+..
T Consensus 271 --------~~i~~g~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~~p 321 (329)
T 4aoj_A 271 --------DCITQGRELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQAP 321 (329)
T ss_dssp --------HHHHHTCCCCCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHHSC
T ss_pred --------HHHHcCCCCCCcccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhhCC
Confidence 123334455667788899999999999999999999999999999987653
No 3
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=1.5e-53 Score=456.22 Aligned_cols=258 Identities=26% Similarity=0.417 Sum_probs=217.1
Q ss_pred CCCCCCcccccCCeeEEEEEeC------CCcEEEEEEeccCCh-hhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEE
Q 003158 512 NFNSSTQIGQGGYGKVYKGILP------DGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQML 584 (843)
Q Consensus 512 ~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~l 584 (843)
+++..++||+|+||+||+|.+. +++.||||+++.... ...++|.+|+.++++++|||||+++|+|.+++..+|
T Consensus 27 ~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~l 106 (308)
T 4gt4_A 27 AVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSM 106 (308)
T ss_dssp GEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEE
T ss_pred HCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEEE
Confidence 3555788999999999999863 468999999975432 335789999999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHhhcC--------------CCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCc
Q 003158 585 VYEFMSNGTLRDQLSAKS--------------KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFT 650 (843)
Q Consensus 585 V~e~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~ 650 (843)
|||||++|+|.++|..+. ...+++..+..|+.|||+||+|||+++ ||||||||+|||++++++
T Consensus 107 V~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~---iiHRDLK~~NILl~~~~~ 183 (308)
T 4gt4_A 107 IFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHH---VVHKDLATRNVLVYDKLN 183 (308)
T ss_dssp EEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGC
T ss_pred EEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCC---CCCCCccccceEECCCCC
Confidence 999999999999996532 235899999999999999999999999 999999999999999999
Q ss_pred EEEeeccccccCCCCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHh-CCCCCCCCcchHHHH
Q 003158 651 AKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREV 729 (843)
Q Consensus 651 ~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~ellt-g~~pf~~~~~~~~~~ 729 (843)
+||+|||+|+.....+. ........||+.|||||++.+..++.++|||||||++|||+| |+.||..... .+..
T Consensus 184 ~Ki~DFGlar~~~~~~~-----~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~-~~~~ 257 (308)
T 4gt4_A 184 VKISDLGLFREVYAADY-----YKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSN-QDVV 257 (308)
T ss_dssp EEECCSCCBCGGGGGGC-----BCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCH-HHHH
T ss_pred EEECCcccceeccCCCc-----eeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCH-HHHH
Confidence 99999999986543221 122344579999999999999999999999999999999999 8999976543 1111
Q ss_pred HHHhhcccchhhccCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhh
Q 003158 730 NIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWN 787 (843)
Q Consensus 730 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~ 787 (843)
..+..+...+.|+++++.+.+++.+||+.+|.+||+|.+|++.|+.+.+
T Consensus 258 ---------~~i~~~~~~~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~~n 306 (308)
T 4gt4_A 258 ---------EMIRNRQVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAWGN 306 (308)
T ss_dssp ---------HHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSCC
T ss_pred ---------HHHHcCCCCCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhccC
Confidence 1233444556788899999999999999999999999999999997643
No 4
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=3e-53 Score=457.43 Aligned_cols=258 Identities=22% Similarity=0.376 Sum_probs=212.5
Q ss_pred cCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCChhhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEEecC
Q 003158 511 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFM 589 (843)
Q Consensus 511 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e~~ 589 (843)
+.|+..++||+|+||+||+|+.. +|+.||||++........+.+.+|+++|+.++|||||+++++|.+++..|||||||
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~ 153 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL 153 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCC
Confidence 46888999999999999999965 79999999997654445567899999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCCCC
Q 003158 590 SNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEG 669 (843)
Q Consensus 590 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~ 669 (843)
++|+|.+++... .+++..+..++.||+.||+|||+++ ||||||||+|||++.++.+||+|||+|+......
T Consensus 154 ~gg~L~~~l~~~---~l~e~~~~~~~~qi~~aL~ylH~~~---IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~--- 224 (346)
T 4fih_A 154 EGGALTDIVTHT---RMNEEQIAAVCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV--- 224 (346)
T ss_dssp TTEEHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCCTTCEECCSSS---
T ss_pred CCCcHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCC---cccccCCHHHEEECCCCCEEEecCcCceecCCCC---
Confidence 999999999753 4899999999999999999999999 9999999999999999999999999998764321
Q ss_pred cccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhccCCCCCC
Q 003158 670 IVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSY 749 (843)
Q Consensus 670 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 749 (843)
.......||+.|||||++.+..|+.++||||+||++|||++|+.||..... .+...
T Consensus 225 ----~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~-~~~~~------------------- 280 (346)
T 4fih_A 225 ----PRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP-LKAMK------------------- 280 (346)
T ss_dssp ----CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH-HHHHH-------------------
T ss_pred ----CcccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH-HHHHH-------------------
Confidence 223456799999999999999999999999999999999999999975432 11111
Q ss_pred CHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCCCCccCCCCCcccCCCC
Q 003158 750 PSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSSDVS 828 (843)
Q Consensus 750 ~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~sa~e~L~Hp~f~~~~~ 828 (843)
.+.... +..-+.. +..++.+.|||.+||+.||++|+||+|+|+||||+....
T Consensus 281 ----------~i~~~~---~~~~~~~--------------~~~s~~~~dli~~~L~~dP~~R~ta~e~l~Hp~~~~~~~ 332 (346)
T 4fih_A 281 ----------MIRDNL---PPRLKNL--------------HKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGP 332 (346)
T ss_dssp ----------HHHHSS---CCCCSCG--------------GGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCGGGGGCCC
T ss_pred ----------HHHcCC---CCCCCcc--------------ccCCHHHHHHHHHHcCCChhHCcCHHHHhcCHhhcCCCC
Confidence 111100 0000000 111233457888999999999999999999999987544
No 5
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=4.5e-52 Score=442.82 Aligned_cols=267 Identities=25% Similarity=0.450 Sum_probs=214.1
Q ss_pred HHHcCCCCCCcccccCCeeEEEEEeCCCcEEEEEEeccC--ChhhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEE
Q 003158 508 LATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEG--SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLV 585 (843)
Q Consensus 508 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV 585 (843)
+..+++...++||+|+||+||+|++++ .||||+++.. .....++|.+|++++++++|||||+++|++.+ +..+||
T Consensus 33 i~~~~l~l~~~iG~G~fG~Vy~~~~~~--~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iV 109 (307)
T 3omv_A 33 IEASEVMLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIV 109 (307)
T ss_dssp CCTTSCCEEEECCCCSSSEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEE
T ss_pred EcHHHeEEeeEEeeCCCcEEEEEEECC--cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEE
Confidence 344677888999999999999998753 5999998743 33445789999999999999999999999865 568999
Q ss_pred EecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCC
Q 003158 586 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVP 665 (843)
Q Consensus 586 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~ 665 (843)
||||++|+|.++++... .++++..+..|+.|||+||+|||+++ ||||||||+|||+++++.+||+|||+|+.....
T Consensus 110 mEy~~gGsL~~~l~~~~-~~l~~~~~~~i~~qia~gL~yLH~~~---IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~ 185 (307)
T 3omv_A 110 TQWCEGSSLYKHLHVQE-TKFQMFQLIDIARQTAQGMDYLHAKN---IIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRW 185 (307)
T ss_dssp EECCSSCBHHHHHHTSC-CCCCHHHHHHHHHHHHHHHHHHHHTT---CBCSCCCSSSEEEETTEEEEECCCSSCBC----
T ss_pred EEcCCCCCHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCccCHHHEEECCCCcEEEeeccCceecccC
Confidence 99999999999997643 46999999999999999999999998 999999999999999999999999999875432
Q ss_pred CCCCcccceeeeeecccCCccCchhccc---CCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhc
Q 003158 666 DIEGIVPAHVSTVVKGTPGYLDPEYFLT---HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVI 742 (843)
Q Consensus 666 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 742 (843)
.. ........||+.|||||++.+ ..|+.++|||||||++|||+||+.||....+........ .. ...
T Consensus 186 ~~-----~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~~~~~~-~~----~~~ 255 (307)
T 3omv_A 186 SG-----SQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMV-GR----GYA 255 (307)
T ss_dssp -------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHH-HT----TCC
T ss_pred Cc-----ceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHHHHHHH-hc----CCC
Confidence 21 222345679999999999974 468999999999999999999999998655432222111 11 112
Q ss_pred cCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCC
Q 003158 743 DGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPE 791 (843)
Q Consensus 743 ~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~ 791 (843)
.+.....+.++++.+.+++.+||+.+|++||++.++++.|+.+...+|.
T Consensus 256 ~p~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~~lpk 304 (307)
T 3omv_A 256 SPDLSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSLPK 304 (307)
T ss_dssp CCCSTTSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHHTTCCC
T ss_pred CCCcccccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhccCCC
Confidence 2233345677888999999999999999999999999999988766553
No 6
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=4.6e-53 Score=449.13 Aligned_cols=260 Identities=19% Similarity=0.312 Sum_probs=212.6
Q ss_pred cCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCCh---hhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEE
Q 003158 511 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 586 (843)
Q Consensus 511 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~ 586 (843)
++|++.+.||+|+||+||+|+.. +|+.||||++..... ...+.+.+|+++|++++|||||++++++.+++..|+||
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivm 111 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL 111 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 46999999999999999999964 799999999975322 23467899999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCC
Q 003158 587 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 666 (843)
Q Consensus 587 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~ 666 (843)
|||+||+|.+++.+.+ .+++..++.++.||+.||+|||+++ ||||||||+|||+++++.+||+|||+|+......
T Consensus 112 Ey~~gG~L~~~i~~~~--~l~e~~~~~~~~qi~~al~ylH~~~---IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~ 186 (311)
T 4aw0_A 112 SYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 186 (311)
T ss_dssp CCCTTEEHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTSCEEECCCTTCEECCTTT
T ss_pred ecCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCCHHHeEEcCCCCEEEEEcCCceecCCCC
Confidence 9999999999997654 5899999999999999999999999 9999999999999999999999999998764322
Q ss_pred CCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhccCCC
Q 003158 667 IEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNM 746 (843)
Q Consensus 667 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 746 (843)
. .......+||+.|||||++.+..|+.++||||+||++|||++|+.||..... ...... +....
T Consensus 187 ~-----~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~-~~~~~~---------i~~~~- 250 (311)
T 4aw0_A 187 K-----QARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE-GLIFAK---------IIKLE- 250 (311)
T ss_dssp T-----CCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHH---------HHHTC-
T ss_pred C-----cccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH-HHHHHH---------HHcCC-
Confidence 1 1223456799999999999999999999999999999999999999975432 111110 00000
Q ss_pred CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCCCCccC------CCC
Q 003158 747 GSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSM------LKH 820 (843)
Q Consensus 747 ~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~sa~e~------L~H 820 (843)
..+|+ ..++++.|||.+||+.||++|+|++|+ ++|
T Consensus 251 ~~~p~---------------------------------------~~s~~~~dli~~lL~~dp~~R~t~~e~~~~~~i~~H 291 (311)
T 4aw0_A 251 YDFPE---------------------------------------KFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAH 291 (311)
T ss_dssp CCCCT---------------------------------------TCCHHHHHHHHHHSCSSGGGSTTSGGGTCHHHHHTS
T ss_pred CCCCc---------------------------------------ccCHHHHHHHHHHccCCHhHCcChHHHcCCHHHHCC
Confidence 01111 112234478888899999999999985 789
Q ss_pred CcccCCCCCC
Q 003158 821 PYVSSDVSGS 830 (843)
Q Consensus 821 p~f~~~~~~~ 830 (843)
|||++..+..
T Consensus 292 p~F~~idw~~ 301 (311)
T 4aw0_A 292 PFFESVTWEN 301 (311)
T ss_dssp GGGTTCCCTT
T ss_pred CCcCCCCHHH
Confidence 9999877754
No 7
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=9.7e-54 Score=454.47 Aligned_cols=270 Identities=22% Similarity=0.301 Sum_probs=210.8
Q ss_pred cCCCCCCcccccCCeeEEEEEeC----CCcEEEEEEeccCCh--hhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEE
Q 003158 511 NNFNSSTQIGQGGYGKVYKGILP----DGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQML 584 (843)
Q Consensus 511 ~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~l 584 (843)
++|++.+.||+|+||+||+|+.. .++.||||+++.... ....++.+|+++|++++|||||++++++.+++..|+
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~i 103 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYL 103 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEE
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence 57999999999999999999852 478999999875322 223468889999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCC
Q 003158 585 VYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPV 664 (843)
Q Consensus 585 V~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~ 664 (843)
|||||+||+|.+++.+.. .+++..++.++.||+.||+|||+++ ||||||||+|||+++++.+||+|||+|+....
T Consensus 104 vmEy~~gg~L~~~l~~~~--~l~e~~~~~~~~qi~~aL~ylH~~~---IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~ 178 (304)
T 3ubd_A 104 ILDFLRGGDLFTRLSKEV--MFTEEDVKFYLAELALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKESID 178 (304)
T ss_dssp EECCCTTCEEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCCGGGEEECTTSCEEEESSEEEEC---
T ss_pred EEEcCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC---CcCCCCCHHHeEEcCCCCEEecccccceeccC
Confidence 999999999999997654 5899999999999999999999999 99999999999999999999999999986532
Q ss_pred CCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhccC
Q 003158 665 PDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDG 744 (843)
Q Consensus 665 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 744 (843)
.. .......||+.|||||++.+..|+.++||||+||++|||+||+.||...+. .+.... +...
T Consensus 179 ~~-------~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~-~~~~~~---------i~~~ 241 (304)
T 3ubd_A 179 HE-------KKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDR-KETMTM---------ILKA 241 (304)
T ss_dssp ---------CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHH---------HHHC
T ss_pred CC-------ccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCH-HHHHHH---------HHcC
Confidence 21 223456799999999999999999999999999999999999999975432 111111 1100
Q ss_pred CCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCCCC-----ccCCC
Q 003158 745 NMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSS-----SSMLK 819 (843)
Q Consensus 745 ~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~sa-----~e~L~ 819 (843)
...+|..+++ .+.+|+.+||+.||++|+|| +|+++
T Consensus 242 -~~~~p~~~s~---------------------------------------~~~~li~~~L~~dP~~R~ta~~~~~~eil~ 281 (304)
T 3ubd_A 242 -KLGMPQFLSP---------------------------------------EAQSLLRMLFKRNPANRLGAGPDGVEEIKR 281 (304)
T ss_dssp -CCCCCTTSCH---------------------------------------HHHHHHHHHTCSSGGGSTTCSTTTHHHHHT
T ss_pred -CCCCCCcCCH---------------------------------------HHHHHHHHHcccCHHHCCCCCcCCHHHHHc
Confidence 1112222222 23356677777777777776 68999
Q ss_pred CCcccCCCCCCccccccCCCCCC
Q 003158 820 HPYVSSDVSGSNLVSGVIPTITP 842 (843)
Q Consensus 820 Hp~f~~~~~~~~~~~~~~~~~~~ 842 (843)
||||++..+.....+...||+.|
T Consensus 282 Hp~f~~idw~~l~~~~~~pP~~P 304 (304)
T 3ubd_A 282 HSFFSTIDWNKLYRREIHPPFKP 304 (304)
T ss_dssp SGGGTTCCHHHHHTTCSCCSSCC
T ss_pred CccccCCCHHHHHhCCCCcCcCC
Confidence 99999877766666677888887
No 8
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=4.9e-52 Score=458.84 Aligned_cols=258 Identities=22% Similarity=0.380 Sum_probs=213.6
Q ss_pred cCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCChhhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEEecC
Q 003158 511 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFM 589 (843)
Q Consensus 511 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e~~ 589 (843)
+.|+..++||+|+||+||+|+.. +|+.||||++........+.+.+|+++|+.++|||||+++++|.+++..|||||||
T Consensus 151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy~ 230 (423)
T 4fie_A 151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL 230 (423)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeCC
Confidence 56999999999999999999965 69999999998655555667899999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCCCC
Q 003158 590 SNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEG 669 (843)
Q Consensus 590 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~ 669 (843)
+||+|.+++... .+++..+..++.||++||+|||+++ ||||||||+|||++.+|.+||+|||+|+......
T Consensus 231 ~gG~L~~~i~~~---~l~e~~~~~~~~qil~aL~ylH~~~---IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~--- 301 (423)
T 4fie_A 231 EGGALTDIVTHT---RMNEEQIAAVCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV--- 301 (423)
T ss_dssp TTEEHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSTTTEEECTTCCEEECCCTTCEECCSSC---
T ss_pred CCCcHHHHHhcc---CCCHHHHHHHHHHHHHHHHHHHHCC---eecccCCHHHEEEcCCCCEEEecCccceECCCCC---
Confidence 999999999653 4889999999999999999999999 9999999999999999999999999998764321
Q ss_pred cccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhccCCCCCC
Q 003158 670 IVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSY 749 (843)
Q Consensus 670 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 749 (843)
......+||+.|||||++.+..|+.++|||||||++|||++|+.||...... +..
T Consensus 302 ----~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~-~~~-------------------- 356 (423)
T 4fie_A 302 ----PRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPL-KAM-------------------- 356 (423)
T ss_dssp ----CCBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH-HHH--------------------
T ss_pred ----ccccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH-HHH--------------------
Confidence 2234567999999999999999999999999999999999999999754321 111
Q ss_pred CHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCCCCccCCCCCcccCCCC
Q 003158 750 PSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSSDVS 828 (843)
Q Consensus 750 ~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~sa~e~L~Hp~f~~~~~ 828 (843)
+.+......... .....++.+.|||.+||+.||++|+||+|+|+||||+....
T Consensus 357 ---------~~i~~~~~~~~~-----------------~~~~~s~~~~dli~~~L~~dP~~R~ta~ell~Hp~~~~~~~ 409 (423)
T 4fie_A 357 ---------KMIRDNLPPRLK-----------------NLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGP 409 (423)
T ss_dssp ---------HHHHHSCCCCCS-----------------CTTSSCHHHHHHHHHHSCSSTTTSCCHHHHTTCGGGGGCCC
T ss_pred ---------HHHHcCCCCCCc-----------------ccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCHHhcCCCC
Confidence 111111000000 01122334457899999999999999999999999987544
No 9
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=6.7e-52 Score=445.61 Aligned_cols=255 Identities=21% Similarity=0.279 Sum_probs=209.1
Q ss_pred cCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCChhhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEEecC
Q 003158 511 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFM 589 (843)
Q Consensus 511 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e~~ 589 (843)
+.|+..++||+|+||+||+|+.. +|+.||||+++.... ..+|+++++.++|||||++++++.+++..|||||||
T Consensus 58 ~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~-----~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~ 132 (336)
T 4g3f_A 58 HWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-----RVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELL 132 (336)
T ss_dssp TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-----CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred hheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh-----HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEecc
Confidence 45777889999999999999964 699999999975432 246999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCC-cEEEeeccccccCCCCCCC
Q 003158 590 SNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKF-TAKVADFGLSRLAPVPDIE 668 (843)
Q Consensus 590 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~-~~kl~DfGla~~~~~~~~~ 668 (843)
+||+|.+++++.+ ++++..++.++.||+.||+|||+++ ||||||||+|||++.+| .+||+|||+|+........
T Consensus 133 ~gg~L~~~l~~~~--~l~e~~~~~~~~qi~~aL~ylH~~~---IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~ 207 (336)
T 4g3f_A 133 EGGSLGQLIKQMG--CLPEDRALYYLGQALEGLEYLHTRR---ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLG 207 (336)
T ss_dssp TTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHTTT---EECSCCCGGGEEECTTSCCEEECCCTTCEEC------
T ss_pred CCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---ceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCcc
Confidence 9999999997654 5899999999999999999999999 99999999999999988 6999999999876532211
Q ss_pred CcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhccCCC--
Q 003158 669 GIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNM-- 746 (843)
Q Consensus 669 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 746 (843)
. .........||+.|||||++.+..|+.++|||||||++|||+||+.||...... ..+..+.....
T Consensus 208 ~--~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~----------~~~~~i~~~~~~~ 275 (336)
T 4g3f_A 208 K--SLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRG----------PLCLKIASEPPPI 275 (336)
T ss_dssp --------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCS----------CCHHHHHHSCCGG
T ss_pred c--ceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHH----------HHHHHHHcCCCCc
Confidence 0 011123457999999999999999999999999999999999999999754321 11111111111
Q ss_pred CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhh
Q 003158 747 GSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWN 787 (843)
Q Consensus 747 ~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~ 787 (843)
...+..+++.+.+++.+||.+||.+||++.|+++.+.....
T Consensus 276 ~~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~ 316 (336)
T 4g3f_A 276 REIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKALQ 316 (336)
T ss_dssp GGSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred hhcCccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHh
Confidence 23456778889999999999999999999999999887653
No 10
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=4.4e-52 Score=448.98 Aligned_cols=250 Identities=24% Similarity=0.384 Sum_probs=208.7
Q ss_pred cCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCC--hhhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEEe
Q 003158 511 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 587 (843)
Q Consensus 511 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e 587 (843)
++|++.+.||+|+||+||+|+.. +|+.||||++.... ....+.+.+|+++|++++|||||++++++.+++..|||||
T Consensus 24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmE 103 (350)
T 4b9d_A 24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMD 103 (350)
T ss_dssp CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEe
Confidence 68999999999999999999964 79999999997543 2335679999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCC
Q 003158 588 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 667 (843)
Q Consensus 588 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~ 667 (843)
||+||+|.+++..+....+++..++.|+.||+.||+|||+++ ||||||||+|||+++++.+||+|||+|+.....
T Consensus 104 y~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~~---IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~-- 178 (350)
T 4b9d_A 104 YCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRK---ILHRDIKSQNIFLTKDGTVQLGDFGIARVLNST-- 178 (350)
T ss_dssp CCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTT---CEETTCCGGGEEECTTCCEEECSTTEESCCCHH--
T ss_pred CCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCCHHHEEECCCCCEEEcccccceeecCC--
Confidence 999999999998776667899999999999999999999999 999999999999999999999999999865321
Q ss_pred CCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhccCCCC
Q 003158 668 EGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMG 747 (843)
Q Consensus 668 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 747 (843)
........||+.|||||++.+..|+.++|||||||++|||+||+.||..... .+.. ..+..+..+
T Consensus 179 -----~~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~-~~~~---------~~i~~~~~~ 243 (350)
T 4b9d_A 179 -----VELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSM-KNLV---------LKIISGSFP 243 (350)
T ss_dssp -----HHHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSH-HHHH---------HHHHHTCCC
T ss_pred -----cccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH-HHHH---------HHHHcCCCC
Confidence 1223456799999999999999999999999999999999999999976542 2222 123334444
Q ss_pred CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 003158 748 SYPSECVEKFIKLALKCCQDETDARPSMSEVMR 780 (843)
Q Consensus 748 ~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~ 780 (843)
..+..+++++.+++.+||++||.+||++.++++
T Consensus 244 ~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~ 276 (350)
T 4b9d_A 244 PVSLHYSYDLRSLVSQLFKRNPRDRPSVNSILE 276 (350)
T ss_dssp CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred CCCccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 556667788889999999999999999998875
No 11
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=3.8e-52 Score=436.22 Aligned_cols=253 Identities=22% Similarity=0.314 Sum_probs=195.4
Q ss_pred cCCCCCCcccccCCeeEEEEEe-CCCcEEEEEEeccCCh---hhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEE
Q 003158 511 NNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 586 (843)
Q Consensus 511 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~ 586 (843)
++|++.+.||+|+||+||+|.. .+|+.||||++..... ...+.+.+|++++++++||||+++++++.+++..|+||
T Consensus 13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivm 92 (275)
T 3hyh_A 13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI 92 (275)
T ss_dssp -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEE
Confidence 6899999999999999999996 4799999999975432 23467999999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCC
Q 003158 587 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 666 (843)
Q Consensus 587 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~ 666 (843)
||+ +|+|.+++.++. ++++..++.++.||+.||+|||+++ |+||||||+|||+++++.+||+|||+|+.....
T Consensus 93 Ey~-~g~L~~~l~~~~--~l~e~~~~~~~~qi~~al~ylH~~~---IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~- 165 (275)
T 3hyh_A 93 EYA-GNELFDYIVQRD--KMSEQEARRFFQQIISAVEYCHRHK---IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG- 165 (275)
T ss_dssp ECC-CEEHHHHHHHSC--SCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCTTTEEECTTCCEEECCSSCC-------
T ss_pred eCC-CCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---cccccCChHHeEECCCCCEEEeecCCCeecCCC-
Confidence 999 689999997653 5899999999999999999999999 999999999999999999999999999865422
Q ss_pred CCCcccceeeeeecccCCccCchhcccCCC-CchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhccCC
Q 003158 667 IEGIVPAHVSTVVKGTPGYLDPEYFLTHKL-TDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGN 745 (843)
Q Consensus 667 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 745 (843)
.......||+.|||||++.+..+ +.++||||+||++|||+||+.||..... ...
T Consensus 166 -------~~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~-~~~----------------- 220 (275)
T 3hyh_A 166 -------NFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESI-PVL----------------- 220 (275)
T ss_dssp ----------------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-HHH-----------------
T ss_pred -------CccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCH-HHH-----------------
Confidence 22345679999999999998876 5799999999999999999999975431 111
Q ss_pred CCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCCCCccCCCCCcccC
Q 003158 746 MGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSS 825 (843)
Q Consensus 746 ~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~sa~e~L~Hp~f~~ 825 (843)
.+.+..+--.-| ...++.+.+|+.+||+.||++|+|++|+|+||||+.
T Consensus 221 ------------~~~i~~~~~~~p--------------------~~~s~~~~~li~~~L~~dP~~R~s~~eil~hpw~k~ 268 (275)
T 3hyh_A 221 ------------FKNISNGVYTLP--------------------KFLSPGAAGLIKRMLIVNPLNRISIHEIMQDDWFKV 268 (275)
T ss_dssp ------------HHHHHHTCCCCC--------------------TTSCHHHHHHHHHHSCSSGGGSCCHHHHHHCHHHHT
T ss_pred ------------HHHHHcCCCCCC--------------------CCCCHHHHHHHHHHccCChhHCcCHHHHHcCccccc
Confidence 111111100001 011223447888999999999999999999999987
Q ss_pred CC
Q 003158 826 DV 827 (843)
Q Consensus 826 ~~ 827 (843)
+.
T Consensus 269 ~~ 270 (275)
T 3hyh_A 269 DL 270 (275)
T ss_dssp TC
T ss_pred CC
Confidence 64
No 12
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=8.7e-52 Score=437.41 Aligned_cols=253 Identities=26% Similarity=0.441 Sum_probs=198.5
Q ss_pred CCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCC--hhhHHHHHHHHHHHHhccCCcccceeeeeec----CCcEEEEE
Q 003158 514 NSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDE----EGEQMLVY 586 (843)
Q Consensus 514 ~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~----~~~~~lV~ 586 (843)
+..++||+|+||+||+|.+. +++.||+|++.... ....++|.+|++++++++|||||+++++|.+ ++..+|||
T Consensus 29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvm 108 (290)
T 3fpq_A 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT 108 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEE
Confidence 44567999999999999965 68999999987532 3335679999999999999999999999864 35689999
Q ss_pred ecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcC-CCcEEEeeccccccCCCC
Q 003158 587 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDH-KFTAKVADFGLSRLAPVP 665 (843)
Q Consensus 587 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~-~~~~kl~DfGla~~~~~~ 665 (843)
|||++|+|.+++.+.. .+++..++.++.||++||+|||+++ ++||||||||+|||+++ ++.+||+|||+|+....
T Consensus 109 Ey~~gg~L~~~l~~~~--~l~~~~~~~~~~qi~~aL~ylH~~~-~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~- 184 (290)
T 3fpq_A 109 ELMTSGTLKTYLKRFK--VMKIKVLRSWCRQILKGLQFLHTRT-PPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRA- 184 (290)
T ss_dssp ECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHTSS-SCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCCT-
T ss_pred eCCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC-CCEEecccChhheeEECCCCCEEEEeCcCCEeCCC-
Confidence 9999999999997653 5889999999999999999999875 46999999999999984 78999999999986432
Q ss_pred CCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhccCC
Q 003158 666 DIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGN 745 (843)
Q Consensus 666 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 745 (843)
.......||+.|||||++.+ .|+.++|||||||++|||+||+.||....+........ ..+
T Consensus 185 --------~~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~~~~~~i---------~~~- 245 (290)
T 3fpq_A 185 --------SFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRV---------TSG- 245 (290)
T ss_dssp --------TSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHH---------TTT-
T ss_pred --------CccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHHHHHHHH---------HcC-
Confidence 12345679999999998865 69999999999999999999999997654322211110 000
Q ss_pred CCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCCCCccCCCCCcccC
Q 003158 746 MGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSS 825 (843)
Q Consensus 746 ~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~sa~e~L~Hp~f~~ 825 (843)
.+|.. ......+.+.+|+.+||+.||++|||++|+|+||||+.
T Consensus 246 -------------------------~~~~~------------~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~Hp~~~~ 288 (290)
T 3fpq_A 246 -------------------------VKPAS------------FDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNHAFFQE 288 (290)
T ss_dssp -------------------------CCCGG------------GGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGC-
T ss_pred -------------------------CCCCC------------CCccCCHHHHHHHHHHccCChhHCcCHHHHhcCccccC
Confidence 00100 00011122346778888899999999999999999986
Q ss_pred C
Q 003158 826 D 826 (843)
Q Consensus 826 ~ 826 (843)
+
T Consensus 289 ~ 289 (290)
T 3fpq_A 289 E 289 (290)
T ss_dssp -
T ss_pred C
Confidence 4
No 13
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=7e-51 Score=443.27 Aligned_cols=271 Identities=25% Similarity=0.418 Sum_probs=225.5
Q ss_pred ccHHHHHHHHcCCCCCCcccccCCeeEEEEEeCC------CcEEEEEEeccCChh-hHHHHHHHHHHHHhccC-Ccccce
Q 003158 501 FTYGEMALATNNFNSSTQIGQGGYGKVYKGILPD------GTVVAVKRAQEGSLQ-GEKEFLTEIQFLSRLHH-RNLVSL 572 (843)
Q Consensus 501 ~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h-~nIv~l 572 (843)
+...+|++..++|++.+.||+|+||+||+|.+.. ++.||||+++..... ..++|.+|+++|+++.| ||||++
T Consensus 54 ~~~~~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l 133 (353)
T 4ase_A 54 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL 133 (353)
T ss_dssp CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred CCCcccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEE
Confidence 3345677778999999999999999999998642 468999999865433 35679999999999965 899999
Q ss_pred eeeeecC-CcEEEEEecCCCCCHHHHHhhcC--------------CCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEecc
Q 003158 573 VGYCDEE-GEQMLVYEFMSNGTLRDQLSAKS--------------KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRD 637 (843)
Q Consensus 573 ~~~~~~~-~~~~lV~e~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~D 637 (843)
+|+|.+. +..+||||||++|+|.++|+... ...+++..+..++.|||+||+|||+++ |||||
T Consensus 134 ~g~~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~~---iiHRD 210 (353)
T 4ase_A 134 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRD 210 (353)
T ss_dssp EEEECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHTT---CCCSC
T ss_pred EEEEEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhCC---eecCc
Confidence 9999664 57899999999999999997532 245899999999999999999999999 99999
Q ss_pred CCCCcEEEcCCCcEEEeeccccccCCCCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHh-CC
Q 003158 638 IKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GM 716 (843)
Q Consensus 638 lkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~ellt-g~ 716 (843)
|||+|||+++++.+||+|||+|+....... ........||+.|||||++.+..|+.++|||||||++|||+| |+
T Consensus 211 LK~~NILl~~~~~vKi~DFGlar~~~~~~~-----~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~ 285 (353)
T 4ase_A 211 LAARNILLSEKNVVKICDFGLARDIYKDPD-----YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGA 285 (353)
T ss_dssp CSGGGEEECGGGCEEECCCGGGSCTTTCTT-----SEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSC
T ss_pred cCccceeeCCCCCEEECcchhhhhcccCCC-----ceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCC
Confidence 999999999999999999999987643321 123345679999999999999999999999999999999998 99
Q ss_pred CCCCCCcchHHHHHHHhhcccchhhccCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhh
Q 003158 717 QPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNM 788 (843)
Q Consensus 717 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~ 788 (843)
.||........... .+..+.....|+.+++++.+++..||+.+|.+||++.+++++|+.+.+.
T Consensus 286 ~Pf~~~~~~~~~~~---------~i~~g~~~~~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~llq~ 348 (353)
T 4ase_A 286 SPYPGVKIDEEFCR---------RLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 348 (353)
T ss_dssp CSSTTCCCSHHHHH---------HHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHH---------HHHcCCCCCCCccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHHH
Confidence 99976543221111 2223445566778889999999999999999999999999999988654
No 14
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=3.7e-50 Score=440.61 Aligned_cols=302 Identities=19% Similarity=0.268 Sum_probs=213.5
Q ss_pred HHcCCCCCCcccccCCeeEEEEEeC----CCcEEEEEEeccCChhhHHHHHHHHHHHHhc-cCCcccceeeeeecCCcEE
Q 003158 509 ATNNFNSSTQIGQGGYGKVYKGILP----DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQM 583 (843)
Q Consensus 509 ~~~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~ 583 (843)
..++|++.+.||+|+||+||+|+.+ .++.||||++.... ...++.+|+++|+.+ +||||+++++++.+.++.+
T Consensus 19 l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~--~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~~ 96 (361)
T 4f9c_A 19 LSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS--HPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHVV 96 (361)
T ss_dssp GGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS--CHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEEE
T ss_pred ccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc--CHHHHHHHHHHHHHhcCCCCCceEEEEEEECCEEE
Confidence 4678999999999999999999853 46899999987533 345788999999998 6999999999999999999
Q ss_pred EEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCC-CcEEEeeccccccC
Q 003158 584 LVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHK-FTAKVADFGLSRLA 662 (843)
Q Consensus 584 lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~-~~~kl~DfGla~~~ 662 (843)
+|||||++|+|.+++. .+++.+++.++.||+.||+|||+++ ||||||||+|||++.+ +.+||+|||+|+..
T Consensus 97 lvmE~~~g~~L~~~~~-----~l~~~~~~~~~~qll~al~ylH~~g---IiHRDiKPeNiLl~~~~~~~kl~DFGla~~~ 168 (361)
T 4f9c_A 97 IAMPYLEHESFLDILN-----SLSFQEVREYMLNLFKALKRIHQFG---IVHRDVKPSNFLYNRRLKKYALVDFGLAQGT 168 (361)
T ss_dssp EEEECCCCCCHHHHHT-----TCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEETTTTEEEECCCTTCEEC
T ss_pred EEEeCCCcccHHHHHc-----CCCHHHHHHHHHHHHHHHHHHHHCC---eEeCcCCHHHeEEeCCCCeEEECcCCCCccc
Confidence 9999999999999983 3888999999999999999999999 9999999999999877 79999999999865
Q ss_pred CCCCCCCc---------------------ccceeeeeecccCCccCchhcccC-CCCchhhhHHHHHHHHHHHhCCCCCC
Q 003158 663 PVPDIEGI---------------------VPAHVSTVVKGTPGYLDPEYFLTH-KLTDKSDVYSLGVVFLELLTGMQPIS 720 (843)
Q Consensus 663 ~~~~~~~~---------------------~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwS~G~~l~elltg~~pf~ 720 (843)
........ ......+...||+.|||||++.+. .++.++||||+||++|||++|+.||.
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~ 248 (361)
T 4f9c_A 169 HDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFY 248 (361)
T ss_dssp TTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSS
T ss_pred CCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCC
Confidence 43221000 001122345799999999999875 58999999999999999999999998
Q ss_pred CCcchHHHHHHHhhcccc----------hhhccCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCC
Q 003158 721 HGKNIVREVNIAYQSSMM----------FSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMP 790 (843)
Q Consensus 721 ~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~ 790 (843)
.+.+..+++......... ...... ....|......+.+.+...-...|. ...-..........+.
T Consensus 249 ~~~~~~~~l~~I~~~~G~~~~~~~~~~~~~~~~~-~~~~p~~~~~~~~~~~~~~~~~~p~----~~~~~~~~~~~~~~~~ 323 (361)
T 4f9c_A 249 KASDDLTALAQIMTIRGSRETIQAAKTFGKSILC-SKEVPAQDLRKLCERLRGMDSSTPK----LTSDIQGHATNLEGWN 323 (361)
T ss_dssp CCSSHHHHHHHHHHHHCHHHHHHHHHHTTEEEEE-SSCCCCCCHHHHHHHHC--------------------------CT
T ss_pred CCCCHHHHHHHHHHhcCCccchhhhhhccccccc-cccCcchhhhHHHHhhccccccccc----cccccccccccccccc
Confidence 877655544432211000 000000 0011111111111111111111111 1111111111112234
Q ss_pred CCCCCCCccccCCCCCCCCCCCCCccCCCCCcccC
Q 003158 791 ESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSS 825 (843)
Q Consensus 791 ~~~~~~~dll~~~L~~dp~~R~sa~e~L~Hp~f~~ 825 (843)
..++++.|||++||++||++|+||+|||+||||++
T Consensus 324 ~is~~a~DLl~~lL~~dP~~R~ta~eaL~Hp~f~~ 358 (361)
T 4f9c_A 324 EVPDEAYDLLDKLLDLNPASRITAEEALLHPFFKD 358 (361)
T ss_dssp TCCHHHHHHHHHHTCSCTTTSCCHHHHHTSGGGTT
T ss_pred cCCHHHHHHHHHHCcCChhHCcCHHHHhcCcccCC
Confidence 44566789999999999999999999999999986
No 15
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=9.2e-50 Score=442.06 Aligned_cols=287 Identities=22% Similarity=0.355 Sum_probs=215.6
Q ss_pred cCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCC--hhhHHHHHHHHHHHHhccCCcccceeeeeec------CCc
Q 003158 511 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDE------EGE 581 (843)
Q Consensus 511 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~------~~~ 581 (843)
++|++.+.||+|+||+||+|+.. +|+.||||++.... ....+.+.+|+++|+.++|||||++++++.. .+.
T Consensus 54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~ 133 (398)
T 4b99_A 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKS 133 (398)
T ss_dssp SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCC
T ss_pred CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCE
Confidence 57999999999999999999964 79999999997543 2335678899999999999999999998753 467
Q ss_pred EEEEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeecccccc
Q 003158 582 QMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRL 661 (843)
Q Consensus 582 ~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~ 661 (843)
.|||||||+ |+|.+++... .++++..++.++.||+.||+|||+++ ||||||||+|||++.++.+||+|||+|+.
T Consensus 134 ~~ivmE~~~-g~L~~~i~~~--~~l~~~~~~~~~~qil~al~ylH~~~---iiHRDlKP~NIl~~~~~~~Ki~DFGla~~ 207 (398)
T 4b99_A 134 VYVVLDLME-SDLHQIIHSS--QPLTLEHVRYFLYQLLRGLKYMHSAQ---VIHRDLKPSNLLVNENCELKIGDFGMARG 207 (398)
T ss_dssp EEEEEECCS-EEHHHHHTSS--SCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTCCEEECCCTTCBC
T ss_pred EEEEEeCCC-CCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCc---CcCCCcCccccccCCCCCEEEeecceeee
Confidence 899999995 7899999654 46999999999999999999999999 99999999999999999999999999987
Q ss_pred CCCCCCCCcccceeeeeecccCCccCchhcccC-CCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchh
Q 003158 662 APVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTH-KLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFS 740 (843)
Q Consensus 662 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~ 740 (843)
+...... .........||+.|||||++.+. .++.++||||+||++|||++|+.||..... .++........
T Consensus 208 ~~~~~~~---~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~-~~~l~~I~~~~---- 279 (398)
T 4b99_A 208 LCTSPAE---HQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNY-VHQLQLIMMVL---- 279 (398)
T ss_dssp C----------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSH-HHHHHHHHHHH----
T ss_pred cccCccc---cccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCH-HHHHHHHHHhc----
Confidence 6432111 12233456899999999999875 569999999999999999999999976543 33222221110
Q ss_pred hccCCCCCCCHHHHHHH-HHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCCCCccCCC
Q 003158 741 VIDGNMGSYPSECVEKF-IKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLK 819 (843)
Q Consensus 741 ~~~~~~~~~~~~~~~~l-~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~sa~e~L~ 819 (843)
+.++....... .......+...|...|.. +...++..++.+.|||.+||++||++|+||+|+|+
T Consensus 280 ------g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~ 344 (398)
T 4b99_A 280 ------GTPSPAVIQAVGAERVRAYIQSLPPRQPVP---------WETVYPGADRQALSLLGRMLRFEPSARISAAAALR 344 (398)
T ss_dssp ------CCCCGGGTC-----CHHHHHHSSCCCCCCC---------HHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred ------CCCChHHhhhhhhhhhhhhhhcCCCcCCCC---------HHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence 01111110000 001112222333333322 11234555667789999999999999999999999
Q ss_pred CCcccCC
Q 003158 820 HPYVSSD 826 (843)
Q Consensus 820 Hp~f~~~ 826 (843)
||||+.-
T Consensus 345 Hp~f~~~ 351 (398)
T 4b99_A 345 HPFLAKY 351 (398)
T ss_dssp SGGGTTT
T ss_pred CHhhCcC
Confidence 9999863
No 16
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=3.9e-49 Score=421.04 Aligned_cols=264 Identities=23% Similarity=0.354 Sum_probs=191.4
Q ss_pred cCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCCh-hhHHHHHHHHHHHHhccCCcccceeeeeecCC--------
Q 003158 511 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEG-------- 580 (843)
Q Consensus 511 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~-------- 580 (843)
++|++.+.||+|+||+||+|+.. +|+.||||+++.... ...+++.+|+++|++++|||||++++++.+.+
T Consensus 5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~ 84 (299)
T 4g31_A 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPS 84 (299)
T ss_dssp HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC--------
T ss_pred hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccccc
Confidence 45899999999999999999964 799999999875443 33567999999999999999999999986543
Q ss_pred ----cEEEEEecCCCCCHHHHHhhcCC-CCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEee
Q 003158 581 ----EQMLVYEFMSNGTLRDQLSAKSK-EPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVAD 655 (843)
Q Consensus 581 ----~~~lV~e~~~~gsL~~~l~~~~~-~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~D 655 (843)
..|+|||||++|+|.+++..+.. ...++..++.++.||++||+|||+++ ||||||||+|||++.++.+||+|
T Consensus 85 ~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~~---IiHRDlKp~NILl~~~~~vKl~D 161 (299)
T 4g31_A 85 SPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGD 161 (299)
T ss_dssp --CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEEECC
T ss_pred CCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHCc---CccccCcHHHeEECCCCcEEEcc
Confidence 36999999999999999976543 23445668899999999999999999 99999999999999999999999
Q ss_pred ccccccCCCCCCCCcc-----cceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHH
Q 003158 656 FGLSRLAPVPDIEGIV-----PAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVN 730 (843)
Q Consensus 656 fGla~~~~~~~~~~~~-----~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~ 730 (843)
||+|+........... .....+...||+.|||||++.+..|+.++|||||||++|||++ ||....+......
T Consensus 162 FGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~~~~~~~~ 238 (299)
T 4g31_A 162 FGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQMERVRTLT 238 (299)
T ss_dssp CCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHHHHHHHHH
T ss_pred CccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCccHHHHHHH
Confidence 9999876543211110 0112244579999999999999999999999999999999996 7753221111000
Q ss_pred HHhhcccchhhccCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCC
Q 003158 731 IAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEET 810 (843)
Q Consensus 731 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~ 810 (843)
.+.. ..+|.. +.+. .+...+|+.+||+.||++
T Consensus 239 ---------~~~~---~~~p~~----------------------~~~~--------------~~~~~~li~~~L~~dP~~ 270 (299)
T 4g31_A 239 ---------DVRN---LKFPPL----------------------FTQK--------------YPCEYVMVQDMLSPSPME 270 (299)
T ss_dssp ---------HHHT---TCCCHH----------------------HHHH--------------CHHHHHHHHHHTCSSGGG
T ss_pred ---------HHhc---CCCCCC----------------------Cccc--------------CHHHHHHHHHHcCCChhH
Confidence 0000 011111 0000 111236788899999999
Q ss_pred CCCCccCCCCCcccCCCC
Q 003158 811 PPSSSSMLKHPYVSSDVS 828 (843)
Q Consensus 811 R~sa~e~L~Hp~f~~~~~ 828 (843)
||||+|+|+||||++-.+
T Consensus 271 Rps~~eil~h~~~~~~~~ 288 (299)
T 4g31_A 271 RPEAINIIENAVFEDLDF 288 (299)
T ss_dssp SCCHHHHHTSGGGCCC--
T ss_pred CcCHHHHhcCHhhCCCCC
Confidence 999999999999987543
No 17
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=1.2e-48 Score=419.22 Aligned_cols=264 Identities=23% Similarity=0.340 Sum_probs=200.0
Q ss_pred CCCCCCcccccCCeeEEEEEeCCCcEEEEEEeccCChhhHHHHHHHHHHHHhccCCcccceeeeeecCC----cEEEEEe
Q 003158 512 NFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEG----EQMLVYE 587 (843)
Q Consensus 512 ~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~----~~~lV~e 587 (843)
+|.+.++||+|+||+||+|++ +|+.||||+++... .....+..|+..+.+++|||||+++|+|.+++ ..+||||
T Consensus 4 ~i~L~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~~-~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~E 81 (303)
T 3hmm_A 4 TIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSRE-ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSD 81 (303)
T ss_dssp GEEEEEEEEECSSSEEEEEEE-TTEEEEEEEECGGG-HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEE
T ss_pred EEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccc-hhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEec
Confidence 566778999999999999998 68999999997532 22223345666777899999999999997654 5799999
Q ss_pred cCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcC-----CCCCEEeccCCCCcEEEcCCCcEEEeeccccccC
Q 003158 588 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTE-----ADPPVFHRDIKASNILLDHKFTAKVADFGLSRLA 662 (843)
Q Consensus 588 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~-----~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~ 662 (843)
||++|+|.++++.. ++++..+.+++.|+++||+|||++ .+++||||||||+|||+++++++||+|||+|+..
T Consensus 82 y~~~gsL~~~l~~~---~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~ 158 (303)
T 3hmm_A 82 YHEHGSLFDYLNRY---TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRH 158 (303)
T ss_dssp CCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEEE
T ss_pred CCCCCcHHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCccc
Confidence 99999999999764 488999999999999999999987 2345999999999999999999999999999876
Q ss_pred CCCCCCCcccceeeeeecccCCccCchhcccC------CCCchhhhHHHHHHHHHHHhCCCCCCCCcc------------
Q 003158 663 PVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTH------KLTDKSDVYSLGVVFLELLTGMQPISHGKN------------ 724 (843)
Q Consensus 663 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~------~~~~~sDvwS~G~~l~elltg~~pf~~~~~------------ 724 (843)
...... .........||+.|||||++.+. .++.++|||||||++|||+||+.||.....
T Consensus 159 ~~~~~~---~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~ 235 (303)
T 3hmm_A 159 DSATDT---IDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSD 235 (303)
T ss_dssp ETTTTE---ESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSS
T ss_pred cCCCCc---eeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhccccc
Confidence 432210 01122345799999999999764 367799999999999999999877643211
Q ss_pred -hHHHHHHHhhcccchhhccCCCCC--CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhh
Q 003158 725 -IVREVNIAYQSSMMFSVIDGNMGS--YPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWN 787 (843)
Q Consensus 725 -~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~ 787 (843)
........... ....+..+. .+.++++.+.+++.+||+.+|.+|||+.++++.|+++.+
T Consensus 236 ~~~~~~~~~~~~----~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~ 297 (303)
T 3hmm_A 236 PSVEEMRKVVCE----QKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQ 297 (303)
T ss_dssp CCHHHHHHHHTT----SCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHH
T ss_pred chHHHHHHHHhc----ccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHH
Confidence 11111111100 111111111 123577889999999999999999999999999998865
No 18
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=1e-47 Score=442.49 Aligned_cols=271 Identities=22% Similarity=0.310 Sum_probs=212.5
Q ss_pred cCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCCh---hhHHHHH---HHHHHHHhccCCcccceeeeeecCCcEE
Q 003158 511 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFL---TEIQFLSRLHHRNLVSLVGYCDEEGEQM 583 (843)
Q Consensus 511 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~---~E~~~l~~l~h~nIv~l~~~~~~~~~~~ 583 (843)
++|++.+.||+|+||+||+|+.. +|+.||||++.+... .....+. .++++++.++|||||+++++|.+.+.+|
T Consensus 189 ddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~ly 268 (689)
T 3v5w_A 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLS 268 (689)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEE
T ss_pred HHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEEE
Confidence 67999999999999999999965 699999999974321 1122333 3466777789999999999999999999
Q ss_pred EEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCC
Q 003158 584 LVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAP 663 (843)
Q Consensus 584 lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~ 663 (843)
+|||||+||+|.++|...+ .+++..++.++.||+.||+|||+++ ||||||||+|||++.+|.+||+|||+|+...
T Consensus 269 lVmEy~~GGdL~~~l~~~~--~l~E~~a~~y~~qIl~aL~yLH~~g---IiHRDLKPeNILld~~G~vKL~DFGlA~~~~ 343 (689)
T 3v5w_A 269 FILDLMNGGDLHYHLSQHG--VFSEADMRFYAAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFS 343 (689)
T ss_dssp EEECCCCSCBHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCSGGGEEECTTSCEEECCCTTCEECS
T ss_pred EEEecCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCchHHeEEeCCCCEEecccceeeecC
Confidence 9999999999999997754 4899999999999999999999999 9999999999999999999999999998764
Q ss_pred CCCCCCcccceeeeeecccCCccCchhccc-CCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhc
Q 003158 664 VPDIEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVI 742 (843)
Q Consensus 664 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 742 (843)
.. .....+||+.|||||++.. ..|+.++||||+||++|||++|+.||........
T Consensus 344 ~~---------~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~--------------- 399 (689)
T 3v5w_A 344 KK---------KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK--------------- 399 (689)
T ss_dssp SC---------CCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCH---------------
T ss_pred CC---------CCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHH---------------
Confidence 32 1234579999999999975 5799999999999999999999999964321000
Q ss_pred cCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCCC-----CccC
Q 003158 743 DGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPS-----SSSM 817 (843)
Q Consensus 743 ~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~s-----a~e~ 817 (843)
..+.+.+ +...+ .-| ...++.+.|||.+||+.||++|++ |+|+
T Consensus 400 ------------~~i~~~i---~~~~~-~~p----------------~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei 447 (689)
T 3v5w_A 400 ------------HEIDRMT---LTMAV-ELP----------------DSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEV 447 (689)
T ss_dssp ------------HHHHHHH---HHCCC-CCC----------------TTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHH
T ss_pred ------------HHHHHhh---cCCCC-CCC----------------ccCCHHHHHHHHHHccCCHhHCCCCCCCCHHHH
Confidence 0000000 00000 000 111233446777788888888887 6999
Q ss_pred CCCCcccCCCCCCccccccCCCCCC
Q 003158 818 LKHPYVSSDVSGSNLVSGVIPTITP 842 (843)
Q Consensus 818 L~Hp~f~~~~~~~~~~~~~~~~~~~ 842 (843)
++||||++..+.........||+.|
T Consensus 448 ~~HpfF~~idW~~l~~~~~~pP~~P 472 (689)
T 3v5w_A 448 KESPFFRSLDWQMVFLQKYPPPLIP 472 (689)
T ss_dssp TTSGGGTTCCHHHHHTTCSCCSCCC
T ss_pred hcCccccCCCHHHHHcCCCCcCccC
Confidence 9999999988876666666677766
No 19
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=2.2e-46 Score=435.40 Aligned_cols=260 Identities=22% Similarity=0.364 Sum_probs=215.7
Q ss_pred HcCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCChhhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEEec
Q 003158 510 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 588 (843)
Q Consensus 510 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e~ 588 (843)
.++|++.+.||+|+||+||+|... +|+.||+|++........+.+.+|+++|+.++||||++++++|.+++..++||||
T Consensus 156 l~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~ 235 (573)
T 3uto_A 156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEF 235 (573)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred ccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEee
Confidence 368999999999999999999965 6999999999876666677899999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCC--CcEEEeeccccccCCCCC
Q 003158 589 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHK--FTAKVADFGLSRLAPVPD 666 (843)
Q Consensus 589 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~--~~~kl~DfGla~~~~~~~ 666 (843)
|+||+|.+++..+ ...+++..+..++.||+.||+|||+++ |+||||||+|||++.+ +.+||+|||+|+.+...
T Consensus 236 ~~gg~L~~~i~~~-~~~l~e~~~~~~~~qi~~al~ylH~~~---iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~- 310 (573)
T 3uto_A 236 MSGGELFEKVADE-HNKMSEDEAVEYMRQVCKGLCHMHENN---YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPK- 310 (573)
T ss_dssp CCCCBHHHHHTCT-TSCEEHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESSSSCCCEEECCCSSCEECCTT-
T ss_pred cCCCcHHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCChhhccccCCCCCCEEEeeccceeEccCC-
Confidence 9999999999653 346999999999999999999999999 9999999999999854 89999999999876532
Q ss_pred CCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhccCCC
Q 003158 667 IEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNM 746 (843)
Q Consensus 667 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 746 (843)
.......||+.|||||++.+..|+.++||||+||++|||++|+.||...... +...
T Consensus 311 -------~~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~-~~~~---------------- 366 (573)
T 3uto_A 311 -------QSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDD-ETLR---------------- 366 (573)
T ss_dssp -------SEEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHH-HHHH----------------
T ss_pred -------CceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH-HHHH----------------
Confidence 2344567999999999999999999999999999999999999999754421 1111
Q ss_pred CCCCHHHHHHHHHHHHHh-cccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCCCCccCCCCCcccC
Q 003158 747 GSYPSECVEKFIKLALKC-CQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSS 825 (843)
Q Consensus 747 ~~~~~~~~~~l~~l~~~c-~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~sa~e~L~Hp~f~~ 825 (843)
.+..+ +...+ ..++..++.+.|||.+||+.||++|+||+|+|+||||+.
T Consensus 367 -------------~i~~~~~~~~~-----------------~~~~~~s~~~~dli~~~L~~dp~~R~t~~e~l~Hpw~~~ 416 (573)
T 3uto_A 367 -------------NVKSCDWNMDD-----------------SAFSGISEDGKDFIRKLLLADPNTRMTIHQALEHPWLTP 416 (573)
T ss_dssp -------------HHHTTCCCCCS-----------------GGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSTTTSC
T ss_pred -------------HHHhCCCCCCc-----------------ccccCCCHHHHHHHHHHccCChhHCcCHHHHhcCcCcCC
Confidence 01111 00000 001122334558999999999999999999999999987
Q ss_pred CCC
Q 003158 826 DVS 828 (843)
Q Consensus 826 ~~~ 828 (843)
...
T Consensus 417 ~~~ 419 (573)
T 3uto_A 417 GNA 419 (573)
T ss_dssp CCC
T ss_pred CCC
Confidence 544
No 20
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=1.1e-43 Score=386.43 Aligned_cols=258 Identities=24% Similarity=0.331 Sum_probs=208.9
Q ss_pred HcCCCCCCcccccCCeeEEEEEe-CCCcEEEEEEeccCC--hhhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEE
Q 003158 510 TNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 586 (843)
Q Consensus 510 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~ 586 (843)
.++|++.+.||+|+||.||+|.. .+|+.||||++.... ....+++.+|+++++.++||||+++++++...+..++||
T Consensus 14 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 93 (328)
T 3fe3_A 14 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIM 93 (328)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEE
Confidence 45799999999999999999996 579999999987532 334567889999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCC
Q 003158 587 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 666 (843)
Q Consensus 587 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~ 666 (843)
||+++|+|.+++.... .+++..++.++.|+++||+|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 94 e~~~~~~L~~~l~~~~--~l~~~~~~~~~~qi~~al~~lH~~~---ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~- 167 (328)
T 3fe3_A 94 EYASGGEVFDYLVAHG--RMKEKEARSKFRQIVSAVQYCHQKR---IVHRDLKAENLLLDADMNIKIADFGFSNEFTVG- 167 (328)
T ss_dssp CCCTTCBHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECSTTCCGGGSSS-
T ss_pred ECCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---EeccCCCHHHEEEcCCCCEEEeeccCceecCCC-
Confidence 9999999999997654 4889999999999999999999999 999999999999999999999999999765432
Q ss_pred CCCcccceeeeeecccCCccCchhcccCCCC-chhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhccCC
Q 003158 667 IEGIVPAHVSTVVKGTPGYLDPEYFLTHKLT-DKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGN 745 (843)
Q Consensus 667 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 745 (843)
.......||+.|+|||++.+..+. .++||||+||++|||++|+.||..... ....
T Consensus 168 -------~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~-~~~~---------------- 223 (328)
T 3fe3_A 168 -------GKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNL-KELR---------------- 223 (328)
T ss_dssp -------CGGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSH-HHHH----------------
T ss_pred -------CccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCH-HHHH----------------
Confidence 122345699999999999988775 789999999999999999999975432 1111
Q ss_pred CCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCCCCccCCCCCcccC
Q 003158 746 MGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSS 825 (843)
Q Consensus 746 ~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~sa~e~L~Hp~f~~ 825 (843)
+.+...-...|. ..++.+.+|+++||..||++|||++|+++||||..
T Consensus 224 -------------~~i~~~~~~~p~--------------------~~s~~~~~li~~~L~~dP~~R~t~~eil~h~~~~~ 270 (328)
T 3fe3_A 224 -------------ERVLRGKYRIPF--------------------YMSTDCENLLKRFLVLNPIKRGTLEQIMKDRWINA 270 (328)
T ss_dssp -------------HHHHHCCCCCCT--------------------TSCHHHHHHHHHHCCSSTTTSCCHHHHTTCTTTTT
T ss_pred -------------HHHHhCCCCCCC--------------------CCCHHHHHHHHHHCCCChhHCcCHHHHhcCHhhcC
Confidence 111110000010 01222346788899999999999999999999987
Q ss_pred CCCCC
Q 003158 826 DVSGS 830 (843)
Q Consensus 826 ~~~~~ 830 (843)
.....
T Consensus 271 ~~~~~ 275 (328)
T 3fe3_A 271 GHEED 275 (328)
T ss_dssp TCTTC
T ss_pred CCccc
Confidence 55433
No 21
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=4.6e-44 Score=397.62 Aligned_cols=281 Identities=20% Similarity=0.295 Sum_probs=217.0
Q ss_pred HcCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCChh---hHHHHHHHHHHHHhc-cCCcccceeeeeecCCcEEE
Q 003158 510 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ---GEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQML 584 (843)
Q Consensus 510 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~l 584 (843)
.++|++.+.||+|+||+||+|+.. +++.||+|+++..... ..+.+.+|..+++++ +||||+++++++.+.+..++
T Consensus 51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l 130 (396)
T 4dc2_A 51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF 130 (396)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEE
Confidence 467999999999999999999965 6889999999754322 224578899999887 89999999999999999999
Q ss_pred EEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCC
Q 003158 585 VYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPV 664 (843)
Q Consensus 585 V~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~ 664 (843)
||||+++|+|.+++.... .+++..++.++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+|+....
T Consensus 131 V~E~~~gg~L~~~l~~~~--~l~~~~~~~~~~qi~~aL~~LH~~g---ivHrDLKp~NILl~~~g~ikL~DFGla~~~~~ 205 (396)
T 4dc2_A 131 VIEYVNGGDLMFHMQRQR--KLPEEHARFYSAEISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLR 205 (396)
T ss_dssp EEECCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBCCCC
T ss_pred EEEcCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---EEeccCCHHHEEECCCCCEEEeecceeeeccc
Confidence 999999999999997653 4889999999999999999999999 99999999999999999999999999985322
Q ss_pred CCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhccC
Q 003158 665 PDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDG 744 (843)
Q Consensus 665 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 744 (843)
. ........||+.|+|||++.+..++.++|||||||++|||++|+.||..........
T Consensus 206 ~-------~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~--------------- 263 (396)
T 4dc2_A 206 P-------GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPD--------------- 263 (396)
T ss_dssp T-------TCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC--------------------
T ss_pred C-------CCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccc---------------
Confidence 1 122345679999999999999999999999999999999999999996432110000
Q ss_pred CCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCCCC------ccCC
Q 003158 745 NMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSS------SSML 818 (843)
Q Consensus 745 ~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~sa------~e~L 818 (843)
... ...+.+.+...--.-| ...+..+.+||++||+.||++|+++ +|++
T Consensus 264 ---~~~---~~~~~~~i~~~~~~~p--------------------~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~ei~ 317 (396)
T 4dc2_A 264 ---QNT---EDYLFQVILEKQIRIP--------------------RSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQ 317 (396)
T ss_dssp ----CC---HHHHHHHHHHCCCCCC--------------------TTSCHHHHHHHHHHTCSCTTTSTTCSTTTHHHHHH
T ss_pred ---hhh---HHHHHHHHhccccCCC--------------------CcCCHHHHHHHHHHhcCCHhHcCCCCCCCCHHHHh
Confidence 000 0011111111000000 1112334467888888888888887 6899
Q ss_pred CCCcccCCCCCCccccccCCCCCCC
Q 003158 819 KHPYVSSDVSGSNLVSGVIPTITPR 843 (843)
Q Consensus 819 ~Hp~f~~~~~~~~~~~~~~~~~~~~ 843 (843)
+||||++..+.......+.|++.|.
T Consensus 318 ~Hpff~~i~w~~l~~~~~~pp~~p~ 342 (396)
T 4dc2_A 318 GHPFFRNVDWDMMEQKQVVPPFKPN 342 (396)
T ss_dssp HSTTTTTCCHHHHHTTCSCCSCCCC
T ss_pred cCccccCCCHHHHHcCCCCCCCcCC
Confidence 9999998777655556667777773
No 22
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=1.7e-44 Score=406.37 Aligned_cols=283 Identities=23% Similarity=0.268 Sum_probs=221.4
Q ss_pred cHHHHHHHHcCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCChhh---HHHHHHHHHHHHhccCCcccceeeeee
Q 003158 502 TYGEMALATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQG---EKEFLTEIQFLSRLHHRNLVSLVGYCD 577 (843)
Q Consensus 502 ~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~nIv~l~~~~~ 577 (843)
.+.++....++|++.++||+|+||+||+|+.. +++.||+|++....... .+.+.+|+.+++.++||||++++++|.
T Consensus 65 ~~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~ 144 (437)
T 4aw2_A 65 KVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQ 144 (437)
T ss_dssp HHHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEE
T ss_pred hhhcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEe
Confidence 44566667789999999999999999999976 58899999997532211 234788999999999999999999999
Q ss_pred cCCcEEEEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeecc
Q 003158 578 EEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFG 657 (843)
Q Consensus 578 ~~~~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfG 657 (843)
+.+..++|||||++|+|.+++... ...+++..++.++.||+.||+|||+.+ ||||||||+|||++.++.+||+|||
T Consensus 145 ~~~~~~lV~Ey~~gg~L~~~l~~~-~~~l~e~~~~~~~~qi~~aL~~LH~~g---iiHrDLKp~NILl~~~g~vkL~DFG 220 (437)
T 4aw2_A 145 DDNNLYLVMDYYVGGDLLTLLSKF-EDRLPEEMARFYLAEMVIAIDSVHQLH---YVHRDIKPDNILMDMNGHIRLADFG 220 (437)
T ss_dssp CSSEEEEEECCCTTCBHHHHHHTT-TTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCT
T ss_pred eCCEEEEEEecCCCCcHHHHHHHc-cCCCCHHHHHHHHHHHHHHHHHHHhCC---eEecccCHHHeeEcCCCCEEEcchh
Confidence 999999999999999999999763 345899999999999999999999999 9999999999999999999999999
Q ss_pred ccccCCCCCCCCcccceeeeeecccCCccCchhcc-----cCCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHH
Q 003158 658 LSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFL-----THKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIA 732 (843)
Q Consensus 658 la~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~ 732 (843)
+|+...... ........||+.|+|||++. ...++.++|||||||++|||++|+.||...... +...
T Consensus 221 la~~~~~~~------~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~-~~~~-- 291 (437)
T 4aw2_A 221 SCLKLMEDG------TVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLV-ETYG-- 291 (437)
T ss_dssp TCEECCTTS------CEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHH-HHHH--
T ss_pred hhhhcccCC------CcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChh-HHHH--
Confidence 997654321 22234467999999999997 466899999999999999999999999754321 1111
Q ss_pred hhcccchhhccCCCCCCCHHHHHHHHHHHHHhc-ccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCC-
Q 003158 733 YQSSMMFSVIDGNMGSYPSECVEKFIKLALKCC-QDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEET- 810 (843)
Q Consensus 733 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~-~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~- 810 (843)
+++.... -.-|.. .+..++.+.+||++||..+|++
T Consensus 292 --------------------------~i~~~~~~~~~p~~-----------------~~~~s~~~~dLi~~lL~~~~~r~ 328 (437)
T 4aw2_A 292 --------------------------KIMNHKERFQFPTQ-----------------VTDVSENAKDLIRRLICSREHRL 328 (437)
T ss_dssp --------------------------HHHTHHHHCCCCSS-----------------CCCSCHHHHHHHHTTSSCGGGCT
T ss_pred --------------------------hhhhccccccCCcc-----------------cccCCHHHHHHHHHHhccccccc
Confidence 1100000 000110 1112334457888999888888
Q ss_pred -CCCCccCCCCCcccCCCCCCccccccCCCCCC
Q 003158 811 -PPSSSSMLKHPYVSSDVSGSNLVSGVIPTITP 842 (843)
Q Consensus 811 -R~sa~e~L~Hp~f~~~~~~~~~~~~~~~~~~~ 842 (843)
|++++|+++||||++..+... ....|++.|
T Consensus 329 ~r~~~~eil~Hpff~~i~w~~l--~~~~~p~~P 359 (437)
T 4aw2_A 329 GQNGIEDFKKHPFFSGIDWDNI--RNCEAPYIP 359 (437)
T ss_dssp TTTTTHHHHTSGGGTTCCTTTG--GGSCCSCCC
T ss_pred CCCCHHHHhCCCccCCCCHHHH--hhCCCCCCC
Confidence 999999999999998777543 344555554
No 23
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=4e-43 Score=382.33 Aligned_cols=286 Identities=43% Similarity=0.745 Sum_probs=234.1
Q ss_pred ccCCcccccHHHHHHHHcCCCCCCcccccCCeeEEEEEeCCCcEEEEEEeccCChh-hHHHHHHHHHHHHhccCCcccce
Q 003158 494 KIDGVRSFTYGEMALATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQ-GEKEFLTEIQFLSRLHHRNLVSL 572 (843)
Q Consensus 494 ~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~nIv~l 572 (843)
.......+++.++....++|++.+.||+|+||+||+|...+++.||||++...... ....+.+|+++++.++||||+++
T Consensus 13 ~~~~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~ 92 (326)
T 3uim_A 13 HLGQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRL 92 (326)
T ss_dssp --CCCEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCC
T ss_pred ccCccceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccce
Confidence 34456778999999999999999999999999999999888999999998764322 23468999999999999999999
Q ss_pred eeeeecCCcEEEEEecCCCCCHHHHHhhcC--CCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCc
Q 003158 573 VGYCDEEGEQMLVYEFMSNGTLRDQLSAKS--KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFT 650 (843)
Q Consensus 573 ~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~ 650 (843)
++++.+.+..++||||+++|+|.+++.... ..++++..++.++.|++.||+|||+++.++|+||||||+|||+++++.
T Consensus 93 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~ 172 (326)
T 3uim_A 93 RGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFE 172 (326)
T ss_dssp CEEECCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCC
T ss_pred EEEEecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCC
Confidence 999999999999999999999999997643 345899999999999999999999993223999999999999999999
Q ss_pred EEEeeccccccCCCCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCC-------Cc
Q 003158 651 AKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISH-------GK 723 (843)
Q Consensus 651 ~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~-------~~ 723 (843)
+||+|||+++...... ........||+.|+|||++.+..++.++|||||||++|||++|+.||.. ..
T Consensus 173 ~kl~Dfg~~~~~~~~~------~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~ 246 (326)
T 3uim_A 173 AVVGDFGLAKLMDYKD------THVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDV 246 (326)
T ss_dssp EEECCCSSCEECCSSS------SCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCS
T ss_pred EEeccCccccccCccc------ccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccch
Confidence 9999999998764322 2233445699999999999999999999999999999999999999952 11
Q ss_pred chHHHHHHHhhcccchhhccCCC-CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHh
Q 003158 724 NIVREVNIAYQSSMMFSVIDGNM-GSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 785 (843)
Q Consensus 724 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~ 785 (843)
...++..............+... ...+.+.+..+.+++..||+.+|.+||++.+++++|+..
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~ 309 (326)
T 3uim_A 247 MLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGD 309 (326)
T ss_dssp BHHHHHTTTTSSCCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTS
T ss_pred hHHHHHHHHhhchhhhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCc
Confidence 12223222222223333333333 356788999999999999999999999999999999863
No 24
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=1.3e-43 Score=386.83 Aligned_cols=202 Identities=26% Similarity=0.343 Sum_probs=177.9
Q ss_pred HcCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCC---hhhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEE
Q 003158 510 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLV 585 (843)
Q Consensus 510 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV 585 (843)
.++|++.+.||+|+||+||+|+.. +|+.||+|++.... ....+.+.+|+++++.++||||+++++++.+.+..++|
T Consensus 4 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv 83 (337)
T 1o6l_A 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFV 83 (337)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEE
T ss_pred hHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEE
Confidence 357889999999999999999965 69999999997532 22346788999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCC
Q 003158 586 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVP 665 (843)
Q Consensus 586 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~ 665 (843)
|||+++|+|.+++.... .+++..++.++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 84 ~E~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~ 158 (337)
T 1o6l_A 84 MEYANGGELFFHLSRER--VFTEERARFYGAEIVSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEGISD 158 (337)
T ss_dssp EECCTTCBHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBCSCCT
T ss_pred EeCCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC---eecCcCCHHHEEECCCCCEEEeeccchhhcccC
Confidence 99999999999997643 4889999999999999999999999 999999999999999999999999999854321
Q ss_pred CCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCc
Q 003158 666 DIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 723 (843)
Q Consensus 666 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~ 723 (843)
........||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 159 -------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~ 209 (337)
T 1o6l_A 159 -------GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD 209 (337)
T ss_dssp -------TCCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred -------CCcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCC
Confidence 122344579999999999999999999999999999999999999997543
No 25
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=2.8e-44 Score=394.65 Aligned_cols=274 Identities=24% Similarity=0.354 Sum_probs=211.9
Q ss_pred HHHcCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCC---hhhHHHHHHHHHHHHhc-cCCcccceeeeeecCCcE
Q 003158 508 LATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQ 582 (843)
Q Consensus 508 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~ 582 (843)
...++|++.+.||+|+||+||+|+.. +++.||||++.... ....+.+.+|.++++.+ +||||+++++++.+.+..
T Consensus 20 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~ 99 (353)
T 3txo_A 20 LGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRL 99 (353)
T ss_dssp ---CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEE
T ss_pred CchhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEE
Confidence 34578999999999999999999965 68999999997532 22345678899999988 699999999999999999
Q ss_pred EEEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccC
Q 003158 583 MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLA 662 (843)
Q Consensus 583 ~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~ 662 (843)
++||||+++|+|.+++.... .+++..++.++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+|+..
T Consensus 100 ~lv~E~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~g---ivHrDlkp~NILl~~~g~ikL~DFG~a~~~ 174 (353)
T 3txo_A 100 FFVMEFVNGGDLMFHIQKSR--RFDEARARFYAAEIISALMFLHDKG---IIYRDLKLDNVLLDHEGHCKLADFGMCKEG 174 (353)
T ss_dssp EEEEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBCS
T ss_pred EEEEeCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---CcccCCCHHHEEECCCCCEEEccccceeec
Confidence 99999999999999997653 4889999999999999999999999 999999999999999999999999999854
Q ss_pred CCCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhc
Q 003158 663 PVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVI 742 (843)
Q Consensus 663 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 742 (843)
... ........||+.|+|||++.+..++.++|||||||++|||++|+.||..... .+..... .
T Consensus 175 ~~~-------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~-~~~~~~i---------~ 237 (353)
T 3txo_A 175 ICN-------GVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENE-DDLFEAI---------L 237 (353)
T ss_dssp CC----------------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHH---------H
T ss_pred ccC-------CccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCH-HHHHHHH---------H
Confidence 321 1223456799999999999999999999999999999999999999975432 1111110 0
Q ss_pred cCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCCCC------cc
Q 003158 743 DGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSS------SS 816 (843)
Q Consensus 743 ~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~sa------~e 816 (843)
.. ...+|... ...+.+++++||+.||++|+++ +|
T Consensus 238 ~~-~~~~p~~~---------------------------------------~~~~~~li~~lL~~dP~~R~~~~~~~~~~~ 277 (353)
T 3txo_A 238 ND-EVVYPTWL---------------------------------------HEDATGILKSFMTKNPTMRLGSLTQGGEHA 277 (353)
T ss_dssp HC-CCCCCTTS---------------------------------------CHHHHHHHHHHTCSSGGGSTTSGGGTCTHH
T ss_pred cC-CCCCCCCC---------------------------------------CHHHHHHHHHHhhhCHHHccCCcccCCHHH
Confidence 00 00111111 1223356777777788888887 88
Q ss_pred CCCCCcccCCCCCCccccccCCCCCCC
Q 003158 817 MLKHPYVSSDVSGSNLVSGVIPTITPR 843 (843)
Q Consensus 817 ~L~Hp~f~~~~~~~~~~~~~~~~~~~~ 843 (843)
+++||||++..+.....+...|++.|+
T Consensus 278 il~hp~f~~~~w~~l~~~~~~~p~~p~ 304 (353)
T 3txo_A 278 ILRHPFFKEIDWAQLNHRQIEPPFRPR 304 (353)
T ss_dssp HHTSGGGTTCCHHHHHTTCSCCSCCCC
T ss_pred HhhCCcccCCCHHHHhcCcCCCCccCC
Confidence 999999988776655555566666664
No 26
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=7.7e-43 Score=374.77 Aligned_cols=259 Identities=22% Similarity=0.361 Sum_probs=210.5
Q ss_pred HcCCCCCCcccccCCeeEEEEEe-CCCcEEEEEEeccCChhhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEEec
Q 003158 510 TNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 588 (843)
Q Consensus 510 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e~ 588 (843)
.++|++.+.||+|+||+||+|.. .+++.||||++........+.+.+|+.+++.++||||+++++++...+..++||||
T Consensus 19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 98 (297)
T 3fxz_A 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY 98 (297)
T ss_dssp GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEEC
Confidence 46899999999999999999995 57999999999765555567889999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCCC
Q 003158 589 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 668 (843)
Q Consensus 589 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 668 (843)
+++|+|.+++... .+++..++.++.|+++||+|||+++ |+||||||+|||++.++.+||+|||++.......
T Consensus 99 ~~~~~L~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~-- 170 (297)
T 3fxz_A 99 LAGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ-- 170 (297)
T ss_dssp CTTCBHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCCTTCEECCSTT--
T ss_pred CCCCCHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHhCC---ceeCCCCHHHEEECCCCCEEEeeCCCceecCCcc--
Confidence 9999999999764 4888999999999999999999999 9999999999999999999999999998654322
Q ss_pred CcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhccCCCCC
Q 003158 669 GIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGS 748 (843)
Q Consensus 669 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 748 (843)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||............. ... .....
T Consensus 171 -----~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~-~~~-------~~~~~ 237 (297)
T 3fxz_A 171 -----SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIA-TNG-------TPELQ 237 (297)
T ss_dssp -----CCBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHH-HHC-------SCCCS
T ss_pred -----cccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH-hCC-------CCCCC
Confidence 12234569999999999999999999999999999999999999997554321111100 000 00000
Q ss_pred CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCCCCccCCCCCcccCCCC
Q 003158 749 YPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSSDVS 828 (843)
Q Consensus 749 ~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~sa~e~L~Hp~f~~~~~ 828 (843)
.+..+ ...+.+|+.+||..||++|||++|+|+||||+....
T Consensus 238 ~~~~~---------------------------------------~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~~~~ 278 (297)
T 3fxz_A 238 NPEKL---------------------------------------SAIFRDFLNRCLEMDVEKRGSAKELLQHQFLKIAKP 278 (297)
T ss_dssp CGGGS---------------------------------------CHHHHHHHHHHSCSSTTTSCCHHHHTTCGGGGGCCC
T ss_pred Ccccc---------------------------------------CHHHHHHHHHHccCChhHCcCHHHHhhChhhcccCc
Confidence 01111 112236777888899999999999999999987544
No 27
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=1.9e-43 Score=382.11 Aligned_cols=277 Identities=25% Similarity=0.347 Sum_probs=209.9
Q ss_pred HcCCCCCCcccccCCeeEEEEEeCCCcEEEEEEeccCChh--hHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEEe
Q 003158 510 TNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQ--GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 587 (843)
Q Consensus 510 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e 587 (843)
.++|++.+.||+|+||+||+|...+|+.||+|++...... ..+.+.+|++++++++||||+++++++.+++..++|||
T Consensus 20 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 99 (311)
T 3niz_A 20 MEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFE 99 (311)
T ss_dssp SCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEEE
T ss_pred HhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEEc
Confidence 4689999999999999999999988999999998754322 24678899999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCC
Q 003158 588 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 667 (843)
Q Consensus 588 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~ 667 (843)
|++ |+|.+++... ...+++..++.++.|+++||+|||+++ |+||||||+|||++.++.+||+|||+++......
T Consensus 100 ~~~-~~l~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~- 173 (311)
T 3niz_A 100 FME-KDLKKVLDEN-KTGLQDSQIKIYLYQLLRGVAHCHQHR---ILHRDLKPQNLLINSDGALKLADFGLARAFGIPV- 173 (311)
T ss_dssp CCS-EEHHHHHHTC-TTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEETTSCC-
T ss_pred CCC-CCHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCchHhEEECCCCCEEEccCcCceecCCCc-
Confidence 997 5888888654 345889999999999999999999999 9999999999999999999999999998754321
Q ss_pred CCcccceeeeeecccCCccCchhccc-CCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhccCCC
Q 003158 668 EGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNM 746 (843)
Q Consensus 668 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 746 (843)
.......||+.|+|||++.+ ..++.++||||+||++|||++|+.||...........
T Consensus 174 ------~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~---------------- 231 (311)
T 3niz_A 174 ------RSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPK---------------- 231 (311)
T ss_dssp ------C---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHH----------------
T ss_pred ------ccccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHH----------------
Confidence 22234568999999999986 5689999999999999999999999975443211110
Q ss_pred CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH---------HhhhhCCCCCCCCCccccCCCCCCCCCCCCCccC
Q 003158 747 GSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELE---------SIWNMMPESDTKTPEFINSEHTSKEETPPSSSSM 817 (843)
Q Consensus 747 ~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~---------~~~~~~~~~~~~~~dll~~~L~~dp~~R~sa~e~ 817 (843)
+...+-...|...+...++....+ .+....+...+.+.+|+.+||++||++|||++|+
T Consensus 232 -------------i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~el 298 (311)
T 3niz_A 232 -------------IFSILGTPNPREWPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDA 298 (311)
T ss_dssp -------------HHHHHCCCCTTTSGGGTTSHHHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHH
T ss_pred -------------HHHHHCCCChHHhhhhhccchhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHH
Confidence 111111111111111111000000 0011122334445689999999999999999999
Q ss_pred CCCCcccCCC
Q 003158 818 LKHPYVSSDV 827 (843)
Q Consensus 818 L~Hp~f~~~~ 827 (843)
|+||||++..
T Consensus 299 l~hp~f~~~~ 308 (311)
T 3niz_A 299 MNHPYFKDLD 308 (311)
T ss_dssp HTSGGGTTSC
T ss_pred hcCcccccCC
Confidence 9999998743
No 28
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=8.4e-43 Score=379.00 Aligned_cols=276 Identities=43% Similarity=0.726 Sum_probs=230.1
Q ss_pred HHHHHHcCCCCCCcccccCCeeEEEEEeCCCcEEEEEEeccCChhhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEE
Q 003158 505 EMALATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQML 584 (843)
Q Consensus 505 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~l 584 (843)
++...+++|+..+.||+|+||+||+|.+++++.||||++........+.+.+|+++++.++||||+++++++.+.+..++
T Consensus 33 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 112 (321)
T 2qkw_B 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMIL 112 (321)
T ss_dssp CCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTTCCEE
T ss_pred HHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEE
Confidence 34446789999999999999999999988899999999887666667789999999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHhhcC--CCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccC
Q 003158 585 VYEFMSNGTLRDQLSAKS--KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLA 662 (843)
Q Consensus 585 V~e~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~ 662 (843)
||||+++|+|.+++.... ...+++..++.++.|+++||+|||+++ |+||||||+||+++.++.+||+|||+++..
T Consensus 113 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 189 (321)
T 2qkw_B 113 IYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKG 189 (321)
T ss_dssp EEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCSTTEEECTTCCEEECCCTTCEEC
T ss_pred EEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCCC---eecCCCCHHHEEECCCCCEEEeeccccccc
Confidence 999999999999996543 235899999999999999999999999 999999999999999999999999999864
Q ss_pred CCCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCcc-----hHHHHHHHhhccc
Q 003158 663 PVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKN-----IVREVNIAYQSSM 737 (843)
Q Consensus 663 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~-----~~~~~~~~~~~~~ 737 (843)
..... ........||+.|+|||++.+..++.++|||||||++|||++|+.||..... ...+.........
T Consensus 190 ~~~~~-----~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 264 (321)
T 2qkw_B 190 TELDQ-----THLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQ 264 (321)
T ss_dssp SSSSC-----CCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTTC
T ss_pred ccccc-----cccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhcccccc
Confidence 42221 1222345689999999999999999999999999999999999999975322 2222222222223
Q ss_pred chhhccCCCC-CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhh
Q 003158 738 MFSVIDGNMG-SYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNM 788 (843)
Q Consensus 738 ~~~~~~~~~~-~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~ 788 (843)
+...+++... ..+.+++..+.+++.+||+.+|++||++.++++.|+.+.+.
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~~ 316 (321)
T 2qkw_B 265 LEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRL 316 (321)
T ss_dssp CCSSSSSSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred HHHhcChhhccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhhc
Confidence 3334444333 45788999999999999999999999999999999988654
No 29
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=1.1e-43 Score=396.70 Aligned_cols=281 Identities=19% Similarity=0.256 Sum_probs=222.1
Q ss_pred HHHHHHHcCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCChh---hHHHHHHHHHHHHhccCCcccceeeeeecC
Q 003158 504 GEMALATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ---GEKEFLTEIQFLSRLHHRNLVSLVGYCDEE 579 (843)
Q Consensus 504 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~ 579 (843)
.++....++|++.+.||+|+||+||+|+.. +++.||+|++...... ..+.+.+|+.+++.++||||+++++++.+.
T Consensus 62 ~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~ 141 (410)
T 3v8s_A 62 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDD 141 (410)
T ss_dssp HHHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred HhcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEEC
Confidence 445556789999999999999999999975 6899999998742211 123578899999999999999999999999
Q ss_pred CcEEEEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeecccc
Q 003158 580 GEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLS 659 (843)
Q Consensus 580 ~~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla 659 (843)
+..++||||+++|+|.++++.. .+++..++.++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+|
T Consensus 142 ~~~~lV~E~~~gg~L~~~l~~~---~~~e~~~~~~~~qi~~aL~~LH~~g---ivHrDLKp~NILl~~~g~ikL~DFG~a 215 (410)
T 3v8s_A 142 RYLYMVMEYMPGGDLVNLMSNY---DVPEKWARFYTAEVVLALDAIHSMG---FIHRDVKPDNMLLDKSGHLKLADFGTC 215 (410)
T ss_dssp SEEEEEECCCTTEEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred CEEEEEEeCCCCCcHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCCHHHeeECCCCCEEEecccee
Confidence 9999999999999999999653 4788999999999999999999999 999999999999999999999999999
Q ss_pred ccCCCCCCCCcccceeeeeecccCCccCchhcccCC----CCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhc
Q 003158 660 RLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHK----LTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQS 735 (843)
Q Consensus 660 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~ 735 (843)
+...... ........||+.|+|||++.+.. ++.++|||||||++|||++|+.||...... .....
T Consensus 216 ~~~~~~~------~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~-~~~~~---- 284 (410)
T 3v8s_A 216 MKMNKEG------MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLV-GTYSK---- 284 (410)
T ss_dssp EECCTTS------EEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHH-HHHHH----
T ss_pred EeeccCC------cccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChh-hHHHH----
Confidence 8654321 12233567999999999998765 788999999999999999999999754321 11110
Q ss_pred ccchhhccCCCCCCCHHHHHHHHHHHHHhcc-cCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCC--CC
Q 003158 736 SMMFSVIDGNMGSYPSECVEKFIKLALKCCQ-DETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEET--PP 812 (843)
Q Consensus 736 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~-~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~--R~ 812 (843)
++..-.. ..|. .+..+..+.+||.+||+.+|++ |+
T Consensus 285 ------------------------i~~~~~~~~~p~------------------~~~~s~~~~~li~~lL~~~~~rlgR~ 322 (410)
T 3v8s_A 285 ------------------------IMNHKNSLTFPD------------------DNDISKEAKNLICAFLTDREVRLGRN 322 (410)
T ss_dssp ------------------------HHTHHHHCCCCT------------------TCCCCHHHHHHHHHHSSCGGGCTTSS
T ss_pred ------------------------HHhccccccCCC------------------cccccHHHHHHHHHHccChhhhCCCC
Confidence 0000000 0000 0111233446777888888888 99
Q ss_pred CCccCCCCCcccCCCCCCccccccCCCCCCC
Q 003158 813 SSSSMLKHPYVSSDVSGSNLVSGVIPTITPR 843 (843)
Q Consensus 813 sa~e~L~Hp~f~~~~~~~~~~~~~~~~~~~~ 843 (843)
+++|+++||||++..+.....+...|++.|+
T Consensus 323 ~~~ei~~Hp~f~~~~w~~~~~~~~~~p~~p~ 353 (410)
T 3v8s_A 323 GVEEIKRHLFFKNDQWAWETLRDTVAPVVPD 353 (410)
T ss_dssp CHHHHHTSGGGCCSSCCSTTGGGSCCSCCCC
T ss_pred CHHHHhcCccccCCCHHHHhhcccCCCCCCc
Confidence 9999999999999888777777777888774
No 30
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=1.4e-43 Score=383.65 Aligned_cols=268 Identities=21% Similarity=0.362 Sum_probs=212.2
Q ss_pred HcCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCCh---hhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEE
Q 003158 510 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLV 585 (843)
Q Consensus 510 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV 585 (843)
.++|++.+.||+|+||+||+|+.. +|+.||+|++..... ...+.+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv 84 (318)
T 1fot_A 5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMI 84 (318)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEE
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEE
Confidence 357889999999999999999965 699999999975322 2346778999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCC
Q 003158 586 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVP 665 (843)
Q Consensus 586 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~ 665 (843)
|||+++|+|.+++.... .+++..++.++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++....
T Consensus 85 ~e~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~- 158 (318)
T 1fot_A 85 MDYIEGGELFSLLRKSQ--RFPNPVAKFYAAEVCLALEYLHSKD---IIYRDLKPENILLDKNGHIKITDFGFAKYVPD- 158 (318)
T ss_dssp ECCCCSCBHHHHHHHTS--SCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCCGGGEEECTTSCEEECCCSSCEECSS-
T ss_pred EeCCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCChheEEEcCCCCEEEeecCcceecCC-
Confidence 99999999999997643 5889999999999999999999999 99999999999999999999999999986532
Q ss_pred CCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhccCC
Q 003158 666 DIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGN 745 (843)
Q Consensus 666 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 745 (843)
......||+.|+|||++.+..++.++|||||||++|||++|+.||...... ..... +....
T Consensus 159 ---------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-~~~~~---------i~~~~ 219 (318)
T 1fot_A 159 ---------VTYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTM-KTYEK---------ILNAE 219 (318)
T ss_dssp ---------CBCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHH-HHHHH---------HHHCC
T ss_pred ---------ccccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHH-HHHHH---------HHhCC
Confidence 123456999999999999999999999999999999999999999764421 11111 11110
Q ss_pred CCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCC-----CCccCCCC
Q 003158 746 MGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPP-----SSSSMLKH 820 (843)
Q Consensus 746 ~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~-----sa~e~L~H 820 (843)
..+|..++.++. +++.+||+.||++|+ +++|+++|
T Consensus 220 -~~~p~~~~~~~~---------------------------------------~li~~lL~~dp~~R~~~~~~~~~~i~~h 259 (318)
T 1fot_A 220 -LRFPPFFNEDVK---------------------------------------DLLSRLITRDLSQRLGNLQNGTEDVKNH 259 (318)
T ss_dssp -CCCCTTSCHHHH---------------------------------------HHHHHHTCSCTTTCTTSSTTTTHHHHTS
T ss_pred -CCCCCCCCHHHH---------------------------------------HHHHHHhccCHHHcCCCcCCCHHHHhcC
Confidence 112222223333 455556666666666 89999999
Q ss_pred CcccCCCCCCccccccCCCCCC
Q 003158 821 PYVSSDVSGSNLVSGVIPTITP 842 (843)
Q Consensus 821 p~f~~~~~~~~~~~~~~~~~~~ 842 (843)
|||++..+.........|++.|
T Consensus 260 p~f~~~~~~~~~~~~~~~p~~p 281 (318)
T 1fot_A 260 PWFKEVVWEKLLSRNIETPYEP 281 (318)
T ss_dssp GGGSSCCHHHHHTTCSCCSCCC
T ss_pred ccccCCCHHHHHhCCCCCCCCC
Confidence 9998877654444444455544
No 31
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=2.9e-43 Score=385.72 Aligned_cols=279 Identities=21% Similarity=0.311 Sum_probs=214.1
Q ss_pred cCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCC---hhhHHHHHHHHHHHHhc-cCCcccceeeeeecCCcEEEE
Q 003158 511 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQMLV 585 (843)
Q Consensus 511 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~lV 585 (843)
++|++.+.||+|+||+||+|+.. +++.||+|++.... ....+.+.+|..+++++ +||||+++++++.+.+..++|
T Consensus 9 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv 88 (345)
T 3a8x_A 9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFV 88 (345)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEE
Confidence 57889999999999999999975 68999999997542 23345688999999988 899999999999999999999
Q ss_pred EecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCC
Q 003158 586 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVP 665 (843)
Q Consensus 586 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~ 665 (843)
|||+++|+|.+++.... .+++..++.++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 89 ~e~~~gg~L~~~l~~~~--~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~ 163 (345)
T 3a8x_A 89 IEYVNGGDLMFHMQRQR--KLPEEHARFYSAEISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP 163 (345)
T ss_dssp ECCCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCGGGCBCSCCT
T ss_pred EeCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCHHHEEECCCCCEEEEeccccccccCC
Confidence 99999999999997653 4889999999999999999999999 999999999999999999999999999854321
Q ss_pred CCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhccCC
Q 003158 666 DIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGN 745 (843)
Q Consensus 666 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 745 (843)
........||+.|+|||++.+..++.++|||||||++|||++|+.||..........
T Consensus 164 -------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~---------------- 220 (345)
T 3a8x_A 164 -------GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPD---------------- 220 (345)
T ss_dssp -------TCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC---------------------
T ss_pred -------CCcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccc----------------
Confidence 122345579999999999999999999999999999999999999996422100000
Q ss_pred CCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCCCC------ccCCC
Q 003158 746 MGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSS------SSMLK 819 (843)
Q Consensus 746 ~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~sa------~e~L~ 819 (843)
......+.+.+... .+ .-| +..+..+.+++.+||+.||++|+++ +|+++
T Consensus 221 -----~~~~~~~~~~i~~~---~~-~~p----------------~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~~i~~ 275 (345)
T 3a8x_A 221 -----QNTEDYLFQVILEK---QI-RIP----------------RSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQG 275 (345)
T ss_dssp -------CHHHHHHHHHHC---CC-CCC----------------TTSCHHHHHHHHHHTCSSTTTSTTCCTTTHHHHHHT
T ss_pred -----cccHHHHHHHHHcC---CC-CCC----------------CCCCHHHHHHHHHHhcCCHhHCCCCCCcCCHHHHhc
Confidence 00001111111110 00 000 0112233467778888888888887 68999
Q ss_pred CCcccCCCCCCccccccCCCCCC
Q 003158 820 HPYVSSDVSGSNLVSGVIPTITP 842 (843)
Q Consensus 820 Hp~f~~~~~~~~~~~~~~~~~~~ 842 (843)
||||++..+.....+...|++.|
T Consensus 276 hp~f~~~~w~~~~~~~~~~p~~p 298 (345)
T 3a8x_A 276 HPFFRNVDWDMMEQKQVVPPFKP 298 (345)
T ss_dssp SGGGTTCCHHHHHTTCSCCSCCC
T ss_pred CCccCCCCHHHHHhCCCCCCcCC
Confidence 99998876644444555666665
No 32
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=2.8e-43 Score=385.29 Aligned_cols=274 Identities=22% Similarity=0.327 Sum_probs=213.5
Q ss_pred HHHHcCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCC---hhhHHHHHHHHHHHHhc-cCCcccceeeeeecCCc
Q 003158 507 ALATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGE 581 (843)
Q Consensus 507 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~ 581 (843)
....++|.+.+.||+|+||+||+|+.. +|+.||+|+++... ....+.+..|.++++.+ +||||+++++++.+.+.
T Consensus 13 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~ 92 (345)
T 1xjd_A 13 KLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKEN 92 (345)
T ss_dssp ---CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSE
T ss_pred CCChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCE
Confidence 345678999999999999999999975 68999999997532 12345678899999887 89999999999999999
Q ss_pred EEEEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeecccccc
Q 003158 582 QMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRL 661 (843)
Q Consensus 582 ~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~ 661 (843)
.++||||+++|+|.+++.... .+++..++.++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++.
T Consensus 93 ~~lv~E~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~vkL~DFG~a~~ 167 (345)
T 1xjd_A 93 LFFVMEYLNGGDLMYHIQSCH--KFDLSRATFYAAEIILGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCKE 167 (345)
T ss_dssp EEEEEECCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBC
T ss_pred EEEEEeCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCChhhEEECCCCCEEEeEChhhhh
Confidence 999999999999999997643 4889999999999999999999999 99999999999999999999999999985
Q ss_pred CCCCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhh
Q 003158 662 APVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSV 741 (843)
Q Consensus 662 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~ 741 (843)
..... .......||+.|+|||++.+..++.++|||||||++|||++|+.||...... ....
T Consensus 168 ~~~~~-------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~-~~~~----------- 228 (345)
T 1xjd_A 168 NMLGD-------AKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEE-ELFH----------- 228 (345)
T ss_dssp CCCTT-------CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHH-----------
T ss_pred cccCC-------CcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHH-HHHH-----------
Confidence 43221 1234567999999999999999999999999999999999999999754321 1110
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCCCCc-cCCCC
Q 003158 742 IDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSS-SMLKH 820 (843)
Q Consensus 742 ~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~sa~-e~L~H 820 (843)
.+.. ..+.- | ...+..+.+++.+||+.||++|+++. |+++|
T Consensus 229 ------------------~i~~---~~~~~-p----------------~~~s~~~~~li~~lL~~dp~~R~~~~~~i~~h 270 (345)
T 1xjd_A 229 ------------------SIRM---DNPFY-P----------------RWLEKEAKDLLVKLFVREPEKRLGVRGDIRQH 270 (345)
T ss_dssp ------------------HHHH---CCCCC-C----------------TTSCHHHHHHHHHHSCSSGGGSBTTBSCGGGS
T ss_pred ------------------HHHh---CCCCC-C----------------cccCHHHHHHHHHHhcCCHhHcCCChHHHHcC
Confidence 0000 00000 0 00122234688888999999999998 99999
Q ss_pred CcccCCCCCCccccccCCCCCC
Q 003158 821 PYVSSDVSGSNLVSGVIPTITP 842 (843)
Q Consensus 821 p~f~~~~~~~~~~~~~~~~~~~ 842 (843)
|||++..+.........|++.|
T Consensus 271 p~f~~~~w~~l~~~~~~~p~~p 292 (345)
T 1xjd_A 271 PLFREINWEELERKEIDPPFRP 292 (345)
T ss_dssp GGGTTCCHHHHHTTCSCC----
T ss_pred ccccCCCHHHHhhCCCCCCcCC
Confidence 9998876644444445555554
No 33
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.7e-43 Score=385.51 Aligned_cols=259 Identities=22% Similarity=0.348 Sum_probs=199.9
Q ss_pred HHcCCCCCCcccccCCeeEEEEEe-CCCcEEEEEEeccCChh-hHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEE
Q 003158 509 ATNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQ-GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 586 (843)
Q Consensus 509 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~ 586 (843)
..++|++.+.||+|+||+||+|.. .+|+.||||++...... ..+.+.+|+++++.++||||+++++++.+.+..++||
T Consensus 8 l~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 87 (347)
T 3zgw_A 8 LLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVL 87 (347)
T ss_dssp TTTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HhcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEEE
Confidence 357899999999999999999996 57999999998764322 2357889999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCC
Q 003158 587 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 666 (843)
Q Consensus 587 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~ 666 (843)
||+++|+|.+++.... .+++..++.++.||+.||+|||+.+ |+||||||+||++++++.+||+|||++.......
T Consensus 88 E~~~gg~L~~~l~~~~--~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~ 162 (347)
T 3zgw_A 88 EYCPGGELFDYIISQD--RLSEEETRVVFRQIVSAVAYVHSQG---YAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNK 162 (347)
T ss_dssp ECCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBC-----
T ss_pred eCCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCccHHHEEEcCCCCEEEEeccCcccccCCC
Confidence 9999999999997654 4889999999999999999999999 9999999999999999999999999987643221
Q ss_pred CCCcccceeeeeecccCCccCchhcccCCC-CchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhccCC
Q 003158 667 IEGIVPAHVSTVVKGTPGYLDPEYFLTHKL-TDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGN 745 (843)
Q Consensus 667 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 745 (843)
........||+.|+|||++.+..+ +.++||||+||++|||++|+.||...... ...... ..+.
T Consensus 163 ------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~-~~~~~i---------~~~~ 226 (347)
T 3zgw_A 163 ------DYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVM-ALYKKI---------MRGK 226 (347)
T ss_dssp ---------------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHH---------HHTC
T ss_pred ------CccccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHH-HHHHHH---------HcCC
Confidence 122344579999999999998775 88999999999999999999999754321 111100 0000
Q ss_pred CCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCCCCccCCCCCcccC
Q 003158 746 MGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSS 825 (843)
Q Consensus 746 ~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~sa~e~L~Hp~f~~ 825 (843)
...|.. .++...+++.+||+.||++|||++|+++||||..
T Consensus 227 -~~~p~~---------------------------------------~s~~~~~li~~~L~~dP~~Rps~~eil~hp~~~~ 266 (347)
T 3zgw_A 227 -YDVPKW---------------------------------------LSPSSILLLQQMLQVDPKKRISMKNLLNHPWIMQ 266 (347)
T ss_dssp -CCCCTT---------------------------------------CCHHHHHHHHHHTCSSGGGSCCHHHHHTCHHHHT
T ss_pred -CCCCCC---------------------------------------CCHHHHHHHHHHcccCHhHCcCHHHHhcCcchhc
Confidence 001111 1122235778888888999999999999999877
Q ss_pred CCC
Q 003158 826 DVS 828 (843)
Q Consensus 826 ~~~ 828 (843)
+..
T Consensus 267 ~~~ 269 (347)
T 3zgw_A 267 DYN 269 (347)
T ss_dssp TTC
T ss_pred CCC
Confidence 543
No 34
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=4.4e-43 Score=381.98 Aligned_cols=202 Identities=26% Similarity=0.407 Sum_probs=168.7
Q ss_pred HcCCCCCCcccccCCeeEEEEEe----CCCcEEEEEEeccCCh----hhHHHHHHHHHHHHhccCCcccceeeeeecCCc
Q 003158 510 TNNFNSSTQIGQGGYGKVYKGIL----PDGTVVAVKRAQEGSL----QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGE 581 (843)
Q Consensus 510 ~~~~~~~~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~~----~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~ 581 (843)
.++|++.+.||+|+||.||+|+. .+++.||+|+++.... .....+.+|+++++.++||||+++++++.+.+.
T Consensus 16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 95 (327)
T 3a62_A 16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGK 95 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSC
T ss_pred HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCE
Confidence 46799999999999999999996 4789999999976432 234567889999999999999999999999999
Q ss_pred EEEEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeecccccc
Q 003158 582 QMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRL 661 (843)
Q Consensus 582 ~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~ 661 (843)
.++||||+++|+|.+++.... .+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++.
T Consensus 96 ~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~al~~lH~~~---ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~ 170 (327)
T 3a62_A 96 LYLILEYLSGGELFMQLEREG--IFMEDTACFYLAEISMALGHLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCKE 170 (327)
T ss_dssp EEEEEECCTTEEHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCTTTEEECTTSCEEECCCSCC--
T ss_pred EEEEEeCCCCCcHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHhCC---EEcccCCHHHeEECCCCcEEEEeCCcccc
Confidence 999999999999999997643 4788899999999999999999999 99999999999999999999999999975
Q ss_pred CCCCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCc
Q 003158 662 APVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 723 (843)
Q Consensus 662 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~ 723 (843)
.... ........||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 171 ~~~~-------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~ 225 (327)
T 3a62_A 171 SIHD-------GTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGEN 225 (327)
T ss_dssp ---------------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred cccC-------CccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCC
Confidence 4321 112234568999999999999999999999999999999999999997544
No 35
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=1.5e-42 Score=381.91 Aligned_cols=259 Identities=24% Similarity=0.342 Sum_probs=210.6
Q ss_pred HcCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCChh------hHHHHHHHHHHHHhccCCcccceeeeeecCCcE
Q 003158 510 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ------GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQ 582 (843)
Q Consensus 510 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~ 582 (843)
.++|++.+.||+|+||+||+|... +|+.||+|++...... ..+.+.+|+.+++.++||||+++++++.+.+..
T Consensus 11 ~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 90 (361)
T 2yab_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDV 90 (361)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred hhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEE
Confidence 467999999999999999999965 6999999998764322 246789999999999999999999999999999
Q ss_pred EEEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCC----cEEEeeccc
Q 003158 583 MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKF----TAKVADFGL 658 (843)
Q Consensus 583 ~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~----~~kl~DfGl 658 (843)
++||||+++|+|.+++... ..+++..+..++.||+.||.|||+++ |+||||||+|||+++++ .+||+|||+
T Consensus 91 ~lv~e~~~gg~L~~~l~~~--~~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~~~~~~~vkl~DFG~ 165 (361)
T 2yab_A 91 VLILELVSGGELFDFLAQK--ESLSEEEATSFIKQILDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGL 165 (361)
T ss_dssp EEEEECCCSCBHHHHHTTC--SCCBHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESCTTSSSCCEEECCCSS
T ss_pred EEEEEcCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEeCCCCCccCEEEEecCC
Confidence 9999999999999999653 45899999999999999999999999 99999999999998877 799999999
Q ss_pred cccCCCCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccc
Q 003158 659 SRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMM 738 (843)
Q Consensus 659 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~ 738 (843)
++...... ......||+.|+|||++.+..++.++|||||||++|||++|..||...... .....
T Consensus 166 a~~~~~~~--------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~-~~~~~------- 229 (361)
T 2yab_A 166 AHEIEDGV--------EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ-ETLAN------- 229 (361)
T ss_dssp CEECCTTC--------CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHH-HHHHH-------
T ss_pred ceEcCCCC--------ccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHH-HHHHH-------
Confidence 98754321 123456999999999999999999999999999999999999999764321 11110
Q ss_pred hhhccCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCCCCccCC
Q 003158 739 FSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSML 818 (843)
Q Consensus 739 ~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~sa~e~L 818 (843)
+.. ....++... ++..+..+.+||.+||..||++|||++|+|
T Consensus 230 --i~~-~~~~~~~~~-----------------------------------~~~~s~~~~~li~~~L~~dP~~R~t~~e~l 271 (361)
T 2yab_A 230 --ITA-VSYDFDEEF-----------------------------------FSQTSELAKDFIRKLLVKETRKRLTIQEAL 271 (361)
T ss_dssp --HHT-TCCCCCHHH-----------------------------------HTTSCHHHHHHHHHHSCSSTTTSCCHHHHH
T ss_pred --HHh-cCCCCCchh-----------------------------------ccCCCHHHHHHHHHHCCCChhHCcCHHHHh
Confidence 000 011111111 011223345789999999999999999999
Q ss_pred CCCcccCCC
Q 003158 819 KHPYVSSDV 827 (843)
Q Consensus 819 ~Hp~f~~~~ 827 (843)
+||||+...
T Consensus 272 ~hp~~~~~~ 280 (361)
T 2yab_A 272 RHPWITPVD 280 (361)
T ss_dssp TSTTTSCSS
T ss_pred cCcCcCCCc
Confidence 999998643
No 36
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=3.3e-42 Score=381.48 Aligned_cols=262 Identities=25% Similarity=0.473 Sum_probs=218.2
Q ss_pred HcCCCCCCcccccCCeeEEEEEeC--------CCcEEEEEEeccCCh-hhHHHHHHHHHHHHhc-cCCcccceeeeeecC
Q 003158 510 TNNFNSSTQIGQGGYGKVYKGILP--------DGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEE 579 (843)
Q Consensus 510 ~~~~~~~~~lg~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~ 579 (843)
.++|++.+.||+|+||+||+|.+. ++..||||+++.... ...+++.+|+++++.+ +||||++++++|.+.
T Consensus 80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 159 (370)
T 2psq_A 80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 159 (370)
T ss_dssp GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSS
T ss_pred HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccC
Confidence 467889999999999999999852 356899999976533 3356799999999999 899999999999999
Q ss_pred CcEEEEEecCCCCCHHHHHhhcCC--------------CCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEE
Q 003158 580 GEQMLVYEFMSNGTLRDQLSAKSK--------------EPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILL 645 (843)
Q Consensus 580 ~~~~lV~e~~~~gsL~~~l~~~~~--------------~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl 645 (843)
+..++||||+++|+|.+++..... ..+++..++.++.||++||+|||+++ |+||||||+|||+
T Consensus 160 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll 236 (370)
T 2psq_A 160 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK---CIHRDLAARNVLV 236 (370)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEE
T ss_pred CCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC---eeccccchhhEEE
Confidence 999999999999999999976432 35788999999999999999999999 9999999999999
Q ss_pred cCCCcEEEeeccccccCCCCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHh-CCCCCCCCcc
Q 003158 646 DHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKN 724 (843)
Q Consensus 646 ~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~ellt-g~~pf~~~~~ 724 (843)
+.++.+||+|||+++........ .......+|+.|+|||++.+..++.++|||||||++|||++ |+.||.....
T Consensus 237 ~~~~~~kl~DFG~a~~~~~~~~~-----~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~ 311 (370)
T 2psq_A 237 TENNVMKIADFGLARDINNIDYY-----KKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV 311 (370)
T ss_dssp CTTCCEEECCCSSCEETTCCCTT-----CTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCG
T ss_pred CCCCCEEEccccCCcccCcccce-----ecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCH
Confidence 99999999999999865432211 11223457789999999999999999999999999999999 9999975432
Q ss_pred hHHHHHHHhhcccchhhccCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhC
Q 003158 725 IVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMM 789 (843)
Q Consensus 725 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~ 789 (843)
. +. ...+..+.....+..++..+.+++..||+.+|.+||++.++++.|+++....
T Consensus 312 ~-~~---------~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il~~~ 366 (370)
T 2psq_A 312 E-EL---------FKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLT 366 (370)
T ss_dssp G-GH---------HHHHHTTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred H-HH---------HHHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHh
Confidence 1 11 1122233344556677889999999999999999999999999999987654
No 37
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=5.2e-43 Score=384.39 Aligned_cols=272 Identities=19% Similarity=0.289 Sum_probs=212.1
Q ss_pred HHcCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCCh---hhHHHHHHHHHHHHhc-cCCcccceeeeeecCCcEE
Q 003158 509 ATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQM 583 (843)
Q Consensus 509 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~ 583 (843)
..++|++.+.||+|+||+||+|+.. +++.||+|++..... ...+.+..|.++++.+ +||||+++++++.+.+..+
T Consensus 18 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~ 97 (353)
T 2i0e_A 18 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY 97 (353)
T ss_dssp -CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEE
T ss_pred chHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEE
Confidence 4568999999999999999999976 488999999975322 2345678899999988 8999999999999999999
Q ss_pred EEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCC
Q 003158 584 LVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAP 663 (843)
Q Consensus 584 lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~ 663 (843)
+||||+++|+|.+++.... .+++..++.++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++...
T Consensus 98 lv~E~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~ 172 (353)
T 2i0e_A 98 FVMEYVNGGDLMYHIQQVG--RFKEPHAVFYAAEIAIGLFFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKENI 172 (353)
T ss_dssp EEEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBCCC
T ss_pred EEEeCCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC---EEeccCCHHHEEEcCCCcEEEEeCCcccccc
Confidence 9999999999999997653 4889999999999999999999999 9999999999999999999999999998543
Q ss_pred CCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhcc
Q 003158 664 VPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVID 743 (843)
Q Consensus 664 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 743 (843)
.. ........||+.|+|||++.+..++.++|||||||++|||++|+.||..... ...... +..
T Consensus 173 ~~-------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~-~~~~~~---------i~~ 235 (353)
T 2i0e_A 173 WD-------GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE-DELFQS---------IME 235 (353)
T ss_dssp CT-------TCCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHH---------HHH
T ss_pred cC-------CcccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCH-HHHHHH---------HHh
Confidence 21 1123445799999999999999999999999999999999999999975432 111111 111
Q ss_pred CCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCC-----CCccCC
Q 003158 744 GNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPP-----SSSSML 818 (843)
Q Consensus 744 ~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~-----sa~e~L 818 (843)
. ...+|...+.++. +++.+||+.||++|+ +++|++
T Consensus 236 ~-~~~~p~~~s~~~~---------------------------------------~li~~lL~~dP~~R~~~~~~~~~~i~ 275 (353)
T 2i0e_A 236 H-NVAYPKSMSKEAV---------------------------------------AICKGLMTKHPGKRLGCGPEGERDIK 275 (353)
T ss_dssp C-CCCCCTTSCHHHH---------------------------------------HHHHHHTCSCTTSCTTCSTTHHHHHH
T ss_pred C-CCCCCCCCCHHHH---------------------------------------HHHHHHhhcCHHHcCCCCCCCHHHHh
Confidence 1 1112222333333 455555666666666 457888
Q ss_pred CCCcccCCCCCCccccccCCCCCC
Q 003158 819 KHPYVSSDVSGSNLVSGVIPTITP 842 (843)
Q Consensus 819 ~Hp~f~~~~~~~~~~~~~~~~~~~ 842 (843)
+||||++..+.........|++.|
T Consensus 276 ~h~~f~~~~w~~l~~~~~~~p~~p 299 (353)
T 2i0e_A 276 EHAFFRYIDWEKLERKEIQPPYKP 299 (353)
T ss_dssp TSGGGTTCCHHHHHTTCSCCSCCC
T ss_pred cCccccCCCHHHHHhCCCCCCcCC
Confidence 899998766655444556666666
No 38
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=4.2e-43 Score=375.93 Aligned_cols=276 Identities=24% Similarity=0.397 Sum_probs=210.6
Q ss_pred cCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCCh--hhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEEe
Q 003158 511 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 587 (843)
Q Consensus 511 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e 587 (843)
++|++.+.||+|+||+||+|... +++.||||++..... ...+.+.+|++++++++||||+++++++.+++..++|||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 81 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE 81 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEe
Confidence 57889999999999999999975 689999999875432 234678899999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCC
Q 003158 588 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 667 (843)
Q Consensus 588 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~ 667 (843)
|+++ ++.+++... ...+++..++.++.|+++||+|||+++ |+||||||+||+++.++.+||+|||+++......
T Consensus 82 ~~~~-~l~~~~~~~-~~~l~~~~~~~~~~ql~~~l~~lH~~~---ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~- 155 (292)
T 3o0g_A 82 FCDQ-DLKKYFDSC-NGDLDPEIVKSFLFQLLKGLGFCHSRN---VLHRDLKPQNLLINRNGELKLANFGLARAFGIPV- 155 (292)
T ss_dssp CCSE-EHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECCSCC-
T ss_pred cCCC-CHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEeecccceecCCcc-
Confidence 9975 666666543 345899999999999999999999999 9999999999999999999999999998654321
Q ss_pred CCcccceeeeeecccCCccCchhcccCC-CCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhccCCC
Q 003158 668 EGIVPAHVSTVVKGTPGYLDPEYFLTHK-LTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNM 746 (843)
Q Consensus 668 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 746 (843)
.......||+.|+|||++.+.. ++.++|||||||++|||++|..||....+..+.......
T Consensus 156 ------~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~------------ 217 (292)
T 3o0g_A 156 ------RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFR------------ 217 (292)
T ss_dssp ------SCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHH------------
T ss_pred ------ccccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHH------------
Confidence 1223456899999999998765 899999999999999999999998766554443332211
Q ss_pred CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHH--------HHHHhhhhCCCCCCCCCccccCCCCCCCCCCCCCccCC
Q 003158 747 GSYPSECVEKFIKLALKCCQDETDARPSMSEVMR--------ELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSML 818 (843)
Q Consensus 747 ~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~--------~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~sa~e~L 818 (843)
.+-...+...+.+.+... .........+..+..+.+|+.+||+.||++||||+|+|
T Consensus 218 ----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l 281 (292)
T 3o0g_A 218 ----------------LLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEAL 281 (292)
T ss_dssp ----------------HHCCCCTTTCTTGGGSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHH
T ss_pred ----------------HhCCCChhhhhhhcccccccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHh
Confidence 111111111111110000 00000111122333445899999999999999999999
Q ss_pred CCCcccCC
Q 003158 819 KHPYVSSD 826 (843)
Q Consensus 819 ~Hp~f~~~ 826 (843)
+||||++.
T Consensus 282 ~hp~f~~~ 289 (292)
T 3o0g_A 282 QHPYFSDF 289 (292)
T ss_dssp TSGGGTTC
T ss_pred cCcccccC
Confidence 99999863
No 39
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=6.2e-43 Score=383.72 Aligned_cols=267 Identities=20% Similarity=0.296 Sum_probs=211.0
Q ss_pred cCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCCh---hhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEE
Q 003158 511 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 586 (843)
Q Consensus 511 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~ 586 (843)
++|++.+.||+|+||.||+|+.. +|+.||+|++..... ...+.+.+|+++++.++||||+++++++.+.+..++||
T Consensus 41 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 120 (350)
T 1rdq_E 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 120 (350)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEE
Confidence 57899999999999999999975 699999999875322 23467889999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCC
Q 003158 587 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 666 (843)
Q Consensus 587 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~ 666 (843)
||+++|+|.+++.... .+++..++.++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 121 e~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~- 194 (350)
T 1rdq_E 121 EYVAGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR- 194 (350)
T ss_dssp ECCTTCBHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECSSC-
T ss_pred cCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---cccccCccceEEECCCCCEEEcccccceeccCC-
Confidence 9999999999997654 4889999999999999999999999 999999999999999999999999999865321
Q ss_pred CCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhccCCC
Q 003158 667 IEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNM 746 (843)
Q Consensus 667 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 746 (843)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||...... +.... +..+ .
T Consensus 195 ---------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~-~~~~~---------i~~~-~ 254 (350)
T 1rdq_E 195 ---------TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI-QIYEK---------IVSG-K 254 (350)
T ss_dssp ---------BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHH---------HHHC-C
T ss_pred ---------cccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHH-HHHHH---------HHcC-C
Confidence 23456999999999999999999999999999999999999999754321 11111 1111 1
Q ss_pred CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCCC-----CccCCCCC
Q 003158 747 GSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPS-----SSSMLKHP 821 (843)
Q Consensus 747 ~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~s-----a~e~L~Hp 821 (843)
..+|..++..+. ++|.+||+.||++|++ ++|+++||
T Consensus 255 ~~~p~~~~~~~~---------------------------------------~li~~lL~~dp~~R~~~~~~~~~ei~~h~ 295 (350)
T 1rdq_E 255 VRFPSHFSSDLK---------------------------------------DLLRNLLQVDLTKRFGNLKNGVNDIKNHK 295 (350)
T ss_dssp CCCCTTCCHHHH---------------------------------------HHHHHHSCSCTTTCTTSSTTTTHHHHTSG
T ss_pred CCCCCCCCHHHH---------------------------------------HHHHHHhhcCHHhccCCccCCHHHHHhCc
Confidence 112222333333 4555556666666665 88888888
Q ss_pred cccCCCCCCccccccCCCCCC
Q 003158 822 YVSSDVSGSNLVSGVIPTITP 842 (843)
Q Consensus 822 ~f~~~~~~~~~~~~~~~~~~~ 842 (843)
||.+..+.........|++.|
T Consensus 296 ~f~~~~w~~~~~~~~~~p~~p 316 (350)
T 1rdq_E 296 WFATTDWIAIYQRKVEAPFIP 316 (350)
T ss_dssp GGTTCCHHHHHTTCSCCSCCC
T ss_pred CcCCCCHHHHhhccCCCCCCC
Confidence 888766654444445555554
No 40
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=7.6e-43 Score=390.19 Aligned_cols=283 Identities=24% Similarity=0.271 Sum_probs=216.6
Q ss_pred cHHHHHHHHcCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCChh---hHHHHHHHHHHHHhccCCcccceeeeee
Q 003158 502 TYGEMALATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ---GEKEFLTEIQFLSRLHHRNLVSLVGYCD 577 (843)
Q Consensus 502 ~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~nIv~l~~~~~ 577 (843)
.+++.....++|++.+.||+|+||+||+|+.. +|+.||+|++...... ..+.+.+|.+++..++||||+++++++.
T Consensus 52 ~~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~ 131 (412)
T 2vd5_A 52 RLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQ 131 (412)
T ss_dssp HHHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEE
T ss_pred hhhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEe
Confidence 34555566789999999999999999999975 7999999999753221 1235788999999999999999999999
Q ss_pred cCCcEEEEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeecc
Q 003158 578 EEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFG 657 (843)
Q Consensus 578 ~~~~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfG 657 (843)
+.+..++||||+++|+|.+++...+ ..+++..++.++.||+.||+|||+++ |+||||||+|||++.++.+||+|||
T Consensus 132 ~~~~~~lVmE~~~gg~L~~~l~~~~-~~l~~~~~~~~~~qi~~aL~~LH~~g---iiHrDLKp~NILld~~g~vkL~DFG 207 (412)
T 2vd5_A 132 DENYLYLVMEYYVGGDLLTLLSKFG-ERIPAEMARFYLAEIVMAIDSVHRLG---YVHRDIKPDNILLDRCGHIRLADFG 207 (412)
T ss_dssp CSSEEEEEECCCCSCBHHHHHHHHS-SCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCT
T ss_pred eCCEEEEEEcCCCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCC---eeecccCHHHeeecCCCCEEEeech
Confidence 9999999999999999999997643 35889999999999999999999999 9999999999999999999999999
Q ss_pred ccccCCCCCCCCcccceeeeeecccCCccCchhcc-------cCCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHH
Q 003158 658 LSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFL-------THKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVN 730 (843)
Q Consensus 658 la~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-------~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~ 730 (843)
+++...... ........||+.|+|||++. +..++.++|||||||++|||++|+.||....... ...
T Consensus 208 la~~~~~~~------~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~-~~~ 280 (412)
T 2vd5_A 208 SCLKLRADG------TVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAE-TYG 280 (412)
T ss_dssp TCEECCTTS------CEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHH-HHH
T ss_pred hheeccCCC------ccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHH-HHH
Confidence 998654321 11223457999999999997 3568999999999999999999999997644211 111
Q ss_pred HHhhcccchhhccCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCC
Q 003158 731 IAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEET 810 (843)
Q Consensus 731 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~ 810 (843)
...... ..+ ..|.. ....+..+.+||++||+ +|++
T Consensus 281 ~i~~~~--------------------------~~~-----~~p~~-------------~~~~s~~~~dli~~lL~-~p~~ 315 (412)
T 2vd5_A 281 KIVHYK--------------------------EHL-----SLPLV-------------DEGVPEEARDFIQRLLC-PPET 315 (412)
T ss_dssp HHHTHH--------------------------HHC-----CCC-----------------CCCHHHHHHHHTTSS-CGGG
T ss_pred HHHhcc--------------------------cCc-----CCCcc-------------ccCCCHHHHHHHHHHcC-Chhh
Confidence 100000 000 00000 01112334467777787 7777
Q ss_pred C---CCCccCCCCCcccCCCCCCccccccCCCCCC
Q 003158 811 P---PSSSSMLKHPYVSSDVSGSNLVSGVIPTITP 842 (843)
Q Consensus 811 R---~sa~e~L~Hp~f~~~~~~~~~~~~~~~~~~~ 842 (843)
| ++++|+++||||++..+... ....|++.|
T Consensus 316 Rlgr~~~~ei~~Hpff~~i~w~~l--~~~~~p~~p 348 (412)
T 2vd5_A 316 RLGRGGAGDFRTHPFFFGLDWDGL--RDSVPPFTP 348 (412)
T ss_dssp CTTTTTHHHHHTSGGGTTCCSTTS--TTSCCSCCC
T ss_pred cCCCCCHHHHhcCCCcCCCCHHHH--hhcCCCCCC
Confidence 7 48899999999988766543 345566666
No 41
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=4.3e-42 Score=373.15 Aligned_cols=269 Identities=22% Similarity=0.319 Sum_probs=214.5
Q ss_pred ccccHHHHHHHHcC----------CCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCChhhHHHHHHHHHHHHhccCC
Q 003158 499 RSFTYGEMALATNN----------FNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHR 567 (843)
Q Consensus 499 ~~~~~~~~~~~~~~----------~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ 567 (843)
+.++++++..+++. |+..+.||+|+||.||+|... +|+.||||++........+.+.+|+.+++.++||
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ 102 (321)
T 2c30_A 23 GVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHF 102 (321)
T ss_dssp --CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCT
T ss_pred CcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCC
Confidence 44677777777654 666789999999999999976 7999999999876656667899999999999999
Q ss_pred cccceeeeeecCCcEEEEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcC
Q 003158 568 NLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDH 647 (843)
Q Consensus 568 nIv~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~ 647 (843)
||+++++++...+..++||||+++|+|.+++.. ..+++..+..++.|+++||+|||+.+ |+||||||+||+++.
T Consensus 103 niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~---~~l~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~ 176 (321)
T 2c30_A 103 NVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQ---VRLNEEQIATVCEAVLQALAYLHAQG---VIHRDIKSDSILLTL 176 (321)
T ss_dssp TBCCEEEEEEETTEEEEEECCCCSCBHHHHHTT---CCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECT
T ss_pred CcceEEEEEEECCEEEEEEecCCCCCHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECC
Confidence 999999999999999999999999999999864 35899999999999999999999999 999999999999999
Q ss_pred CCcEEEeeccccccCCCCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHH
Q 003158 648 KFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVR 727 (843)
Q Consensus 648 ~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~ 727 (843)
++.+||+|||++....... .......||+.|+|||++.+..++.++|||||||++|||++|+.||.......
T Consensus 177 ~~~~kl~Dfg~~~~~~~~~-------~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~- 248 (321)
T 2c30_A 177 DGRVKLSDFGFCAQISKDV-------PKRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQ- 248 (321)
T ss_dssp TCCEEECCCTTCEECCSSS-------CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH-
T ss_pred CCcEEEeeeeeeeecccCc-------cccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-
Confidence 9999999999998654321 11234569999999999999999999999999999999999999997543211
Q ss_pred HHHHHhhcccchhhccCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCC
Q 003158 728 EVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSK 807 (843)
Q Consensus 728 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~d 807 (843)
.... +.... .|... .. ....+...+++.+||..|
T Consensus 249 ~~~~-----------------------------~~~~~--~~~~~-~~--------------~~~~~~l~~li~~~l~~d 282 (321)
T 2c30_A 249 AMKR-----------------------------LRDSP--PPKLK-NS--------------HKVSPVLRDFLERMLVRD 282 (321)
T ss_dssp HHHH-----------------------------HHHSS--CCCCT-TG--------------GGSCHHHHHHHHHHSCSS
T ss_pred HHHH-----------------------------HhcCC--CCCcC-cc--------------ccCCHHHHHHHHHHccCC
Confidence 1100 00000 00000 00 001112336777888899
Q ss_pred CCCCCCCccCCCCCcccCCC
Q 003158 808 EETPPSSSSMLKHPYVSSDV 827 (843)
Q Consensus 808 p~~R~sa~e~L~Hp~f~~~~ 827 (843)
|++|||++|+++||||....
T Consensus 283 p~~Rps~~ell~hp~~~~~~ 302 (321)
T 2c30_A 283 PQERATAQELLDHPFLLQTG 302 (321)
T ss_dssp TTTSCCHHHHHTSGGGGGCC
T ss_pred hhhCcCHHHHhcChhhccCC
Confidence 99999999999999997644
No 42
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=5.7e-43 Score=374.18 Aligned_cols=275 Identities=23% Similarity=0.341 Sum_probs=205.7
Q ss_pred cCCCCCCcccccCCeeEEEEEeCCCcEEEEEEeccCChh--hHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEEec
Q 003158 511 NNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQ--GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 588 (843)
Q Consensus 511 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e~ 588 (843)
++|++.+.||+|+||+||+|...+++.||+|++...... ..+.+.+|+++++.++||||+++++++.+.+..++||||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH 81 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEe
Confidence 578899999999999999999988999999998754332 236788999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCCC
Q 003158 589 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 668 (843)
Q Consensus 589 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 668 (843)
+++ +|.+++.... ..+++..++.++.|+++||+|||+++ |+||||||+||+++.++.+||+|||+++......
T Consensus 82 ~~~-~l~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~-- 154 (288)
T 1ob3_A 82 LDQ-DLKKLLDVCE-GGLESVTAKSFLLQLLNGIAYCHDRR---VLHRDLKPQNLLINREGELKIADFGLARAFGIPV-- 154 (288)
T ss_dssp CSE-EHHHHHHTST-TCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECCTTHHHHHCC----
T ss_pred cCC-CHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCCEEEeECccccccCccc--
Confidence 974 9999986542 45889999999999999999999999 9999999999999999999999999997654221
Q ss_pred CcccceeeeeecccCCccCchhccc-CCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhccCCCC
Q 003158 669 GIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMG 747 (843)
Q Consensus 669 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 747 (843)
.......||+.|+|||++.+ ..++.++|||||||++|||++|+.||........ .....
T Consensus 155 -----~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~-~~~~~-------------- 214 (288)
T 1ob3_A 155 -----RKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQ-LMRIF-------------- 214 (288)
T ss_dssp ------------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHHHH--------------
T ss_pred -----cccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHH--------------
Confidence 12234568999999999976 4589999999999999999999999976543221 11111
Q ss_pred CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH--------HHhhhhCCCCCCCCCccccCCCCCCCCCCCCCccCCC
Q 003158 748 SYPSECVEKFIKLALKCCQDETDARPSMSEVMREL--------ESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLK 819 (843)
Q Consensus 748 ~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L--------~~~~~~~~~~~~~~~dll~~~L~~dp~~R~sa~e~L~ 819 (843)
...-...+...|...+....- ..+....+..+....+|+.+||..||++|||++|+|+
T Consensus 215 --------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 280 (288)
T 1ob3_A 215 --------------RILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE 280 (288)
T ss_dssp --------------HHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred --------------HHHCCCChhhchhhhcccccccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 000000000011000000000 0001111223334458999999999999999999999
Q ss_pred CCcccCC
Q 003158 820 HPYVSSD 826 (843)
Q Consensus 820 Hp~f~~~ 826 (843)
||||++.
T Consensus 281 hp~f~~~ 287 (288)
T 1ob3_A 281 HAYFKEN 287 (288)
T ss_dssp SGGGGC-
T ss_pred Ccchhhc
Confidence 9999863
No 43
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=5.8e-43 Score=386.66 Aligned_cols=301 Identities=19% Similarity=0.255 Sum_probs=226.5
Q ss_pred CcccccHHHHHHHHcCCCCCCcccccCCeeEEEEEe-CCCcEEEEEEeccCChhhHHHHHHHHHHHHhcc-----CCccc
Q 003158 497 GVRSFTYGEMALATNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLH-----HRNLV 570 (843)
Q Consensus 497 ~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----h~nIv 570 (843)
....+++.+.....++|.+.+.||+|+||+||+|.. .+++.||||++.. .....+.+..|+++++.++ ||||+
T Consensus 21 ~~~~~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~-~~~~~~~~~~e~~~l~~l~~~~~~h~~iv 99 (360)
T 3llt_A 21 EIVHFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRN-IKKYTRSAKIEADILKKIQNDDINNNNIV 99 (360)
T ss_dssp GGGSCCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECS-CHHHHHHHHHHHHHHHHTCCCSTTGGGBC
T ss_pred cceeeeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEecc-chhhhhhhHHHHHHHHHhcccCCCCCCee
Confidence 345677777778889999999999999999999997 4789999999974 3344567788999999996 99999
Q ss_pred ceeeeeecCCcEEEEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcC---
Q 003158 571 SLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDH--- 647 (843)
Q Consensus 571 ~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~--- 647 (843)
++++++...+..++||||+ +++|.+++.......+++..++.++.||+.||+|||+++ |+||||||+|||++.
T Consensus 100 ~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~~~ 175 (360)
T 3llt_A 100 KYHGKFMYYDHMCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKMS---LTHTDLKPENILLDDPYF 175 (360)
T ss_dssp CEEEEEEETTEEEEEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESCTTC
T ss_pred cccceeeECCeeEEEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCcccEEEccccc
Confidence 9999999999999999999 999999998876667999999999999999999999999 999999999999975
Q ss_pred ----------------------CCcEEEeeccccccCCCCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHH
Q 003158 648 ----------------------KFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSL 705 (843)
Q Consensus 648 ----------------------~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~ 705 (843)
++.+||+|||+|+..... .....||+.|+|||++.+..++.++|||||
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~----------~~~~~gt~~y~aPE~~~~~~~~~~~Diwsl 245 (360)
T 3llt_A 176 EKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDY----------HGSIINTRQYRAPEVILNLGWDVSSDMWSF 245 (360)
T ss_dssp CEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSC----------CCSCCSCGGGCCHHHHTTCCCCTTHHHHHH
T ss_pred cccccchhcccccccccccccCCCCEEEEeccCceecCCC----------CcCccCcccccCcHHHcCCCCCCccchHHH
Confidence 789999999999864321 234568999999999999999999999999
Q ss_pred HHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhccCCCCCCCHHHHHHHHHHHH-H------hcccCCCCCCCHHHH
Q 003158 706 GVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLAL-K------CCQDETDARPSMSEV 778 (843)
Q Consensus 706 G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~-~------c~~~~p~~RPs~~~v 778 (843)
||++|||++|+.||........ .... .......|............ . .....|.........
T Consensus 246 G~il~ell~g~~pf~~~~~~~~-~~~~----------~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 314 (360)
T 3llt_A 246 GCVLAELYTGSLLFRTHEHMEH-LAMM----------ESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSI 314 (360)
T ss_dssp HHHHHHHHHSSCSCCCSSHHHH-HHHH----------HHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHH
T ss_pred HHHHHHHHHCCCCCCCCcHHHH-HHHH----------HHhcCCCCHHHHhhhhhccCccccCcccceecCcccccchhhh
Confidence 9999999999999976543221 1110 01112233333222111000 0 001112222222221
Q ss_pred HHHHHHhhh-hCCCCCCCCCccccCCCCCCCCCCCCCccCCCCCccc
Q 003158 779 MRELESIWN-MMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVS 824 (843)
Q Consensus 779 l~~L~~~~~-~~~~~~~~~~dll~~~L~~dp~~R~sa~e~L~Hp~f~ 824 (843)
. .+..... .....++.+.+|+.+||+.||++||||+|+|+||||+
T Consensus 315 ~-~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpta~elL~hp~f~ 360 (360)
T 3llt_A 315 K-HVKKCLPLYKIIKHELFCDFLYSILQIDPTLRPSPAELLKHKFLE 360 (360)
T ss_dssp H-HHHTCCCHHHHCCCHHHHHHHHHHCCSSGGGSCCHHHHTTSGGGC
T ss_pred h-hhhhcccccccchHHHHHHHHHHHhcCChhhCCCHHHHhcCcccC
Confidence 1 1111100 0011234455899999999999999999999999995
No 44
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=6.4e-42 Score=372.48 Aligned_cols=264 Identities=28% Similarity=0.435 Sum_probs=216.8
Q ss_pred HcCCCCCCcccccCCeeEEEEEeC----CCcEEEEEEeccCC-hhhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEE
Q 003158 510 TNNFNSSTQIGQGGYGKVYKGILP----DGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQML 584 (843)
Q Consensus 510 ~~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~l 584 (843)
.++|++.+.||+|+||+||+|.+. .+..||||++.... ....+.+.+|+++++.++||||+++++++.+.+..++
T Consensus 48 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 127 (325)
T 3kul_A 48 ASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMI 127 (325)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEE
T ss_pred hhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEE
Confidence 457888999999999999999974 35569999998643 3345789999999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCC
Q 003158 585 VYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPV 664 (843)
Q Consensus 585 V~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~ 664 (843)
||||+++|+|.++++.. ...+++..++.++.|+++||+|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 128 v~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 203 (325)
T 3kul_A 128 VTEYMENGSLDTFLRTH-DGQFTIMQLVGMLRGVGAGMRYLSDLG---YVHRDLAARNVLVDSNLVCKVSDFGLSRVLED 203 (325)
T ss_dssp EEECCTTCBHHHHHHTT-TTCSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCSSCEECC-
T ss_pred EeeCCCCCcHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHCC---eeCCCCCcceEEECCCCCEEECCCCccccccc
Confidence 99999999999999654 345899999999999999999999999 99999999999999999999999999987653
Q ss_pred CCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHh-CCCCCCCCcchHHHHHHHhhcccchhhcc
Q 003158 665 PDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVID 743 (843)
Q Consensus 665 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 743 (843)
.... ........+|+.|+|||++.+..++.++|||||||++|||++ |..||....... ... .+..
T Consensus 204 ~~~~----~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~-~~~---------~~~~ 269 (325)
T 3kul_A 204 DPDA----AYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRD-VIS---------SVEE 269 (325)
T ss_dssp ---C----CEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHHH-HHH---------HHHT
T ss_pred Cccc----eeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHHH-HHH---------HHHc
Confidence 2211 122233456788999999999999999999999999999999 999997654321 111 1222
Q ss_pred CCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCC
Q 003158 744 GNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPE 791 (843)
Q Consensus 744 ~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~ 791 (843)
+.....+..+++.+.+++..||..+|.+||++.++++.|+.+.+..+.
T Consensus 270 ~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~~~~~ 317 (325)
T 3kul_A 270 GYRLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRSPES 317 (325)
T ss_dssp TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSCC-
T ss_pred CCCCCCCCCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhCccc
Confidence 233345667788999999999999999999999999999998775443
No 45
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=1.1e-42 Score=400.84 Aligned_cols=277 Identities=23% Similarity=0.340 Sum_probs=217.8
Q ss_pred HHcCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCCh---hhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEE
Q 003158 509 ATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQML 584 (843)
Q Consensus 509 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~l 584 (843)
..++|++.+.||+|+||.||+|... +|+.||+|++..... .....+.+|+++++.++||||+++++++.+.+..++
T Consensus 182 ~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~l 261 (576)
T 2acx_A 182 TKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCL 261 (576)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred cccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEE
Confidence 3567999999999999999999975 799999999875322 234668899999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCC
Q 003158 585 VYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPV 664 (843)
Q Consensus 585 V~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~ 664 (843)
||||+++|+|.+++.......+++..++.++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++....
T Consensus 262 VmEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~g---IvHrDLKPeNILld~~g~vKL~DFGla~~~~~ 338 (576)
T 2acx_A 262 VLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRER---IVYRDLKPENILLDDHGHIRISDLGLAVHVPE 338 (576)
T ss_dssp EECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTSCEEECCCTTCEECCT
T ss_pred EEEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC---EeccCCchheEEEeCCCCeEEEecccceeccc
Confidence 999999999999998766666999999999999999999999999 99999999999999999999999999987543
Q ss_pred CCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhccC
Q 003158 665 PDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDG 744 (843)
Q Consensus 665 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 744 (843)
. .......||+.|+|||++.+..++.++|||||||++|||++|+.||........
T Consensus 339 ~--------~~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~----------------- 393 (576)
T 2acx_A 339 G--------QTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIK----------------- 393 (576)
T ss_dssp T--------CCEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCC-----------------
T ss_pred C--------ccccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchh-----------------
Confidence 2 122345799999999999999999999999999999999999999975431000
Q ss_pred CCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCC-----CCccCCC
Q 003158 745 NMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPP-----SSSSMLK 819 (843)
Q Consensus 745 ~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~-----sa~e~L~ 819 (843)
...+.+.+... +..-| ...++.+.+||.+||+.||++|+ +++|+++
T Consensus 394 ---------~~~i~~~i~~~----~~~~p----------------~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~ 444 (576)
T 2acx_A 394 ---------REEVERLVKEV----PEEYS----------------ERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKE 444 (576)
T ss_dssp ---------HHHHHHHHHHC----CCCCC----------------TTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHT
T ss_pred ---------HHHHHHHhhcc----cccCC----------------ccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHh
Confidence 00111111110 00000 01122334677777888888888 7899999
Q ss_pred CCcccCCCCCCccccccCCCCCC
Q 003158 820 HPYVSSDVSGSNLVSGVIPTITP 842 (843)
Q Consensus 820 Hp~f~~~~~~~~~~~~~~~~~~~ 842 (843)
||||++..+.....+...|++.|
T Consensus 445 HpfF~~i~w~~l~~~~~~pp~~p 467 (576)
T 2acx_A 445 HPLFKKLNFKRLGAGMLEPPFKP 467 (576)
T ss_dssp SGGGTTCCHHHHHTTCSCCSCCC
T ss_pred ChhhccCCHHHHhcCCCCCCCCC
Confidence 99999866643333445566655
No 46
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=1.4e-42 Score=384.31 Aligned_cols=200 Identities=27% Similarity=0.387 Sum_probs=175.9
Q ss_pred HcCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCC---hhhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEE
Q 003158 510 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLV 585 (843)
Q Consensus 510 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV 585 (843)
.++|++.+.||+|+||+||+|... +++.||+|++.... ....+.+.+|+++++.++||||+++++++.+.+..++|
T Consensus 14 ~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv 93 (384)
T 4fr4_A 14 FDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMV 93 (384)
T ss_dssp GGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence 367899999999999999999965 68999999987432 22346788999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCC
Q 003158 586 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVP 665 (843)
Q Consensus 586 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~ 665 (843)
|||+.+|+|.+++... ..+++..++.++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 94 ~e~~~gg~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~ 168 (384)
T 4fr4_A 94 VDLLLGGDLRYHLQQN--VHFKEETVKLFICELVMALDYLQNQR---IIHRDMKPDNILLDEHGHVHITDFNIAAMLPRE 168 (384)
T ss_dssp ECCCTTEEHHHHHHTT--CCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred EecCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCcHHHeEECCCCCEEEeccceeeeccCC
Confidence 9999999999999754 35899999999999999999999999 999999999999999999999999999875432
Q ss_pred CCCCcccceeeeeecccCCccCchhccc---CCCCchhhhHHHHHHHHHHHhCCCCCCCC
Q 003158 666 DIEGIVPAHVSTVVKGTPGYLDPEYFLT---HKLTDKSDVYSLGVVFLELLTGMQPISHG 722 (843)
Q Consensus 666 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~sDvwS~G~~l~elltg~~pf~~~ 722 (843)
.......||+.|+|||++.+ ..++.++|||||||++|||++|+.||...
T Consensus 169 --------~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~ 220 (384)
T 4fr4_A 169 --------TQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIR 220 (384)
T ss_dssp --------CCBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCC
T ss_pred --------CceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCC
Confidence 22345679999999999974 45899999999999999999999999743
No 47
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=1.5e-42 Score=387.43 Aligned_cols=307 Identities=19% Similarity=0.214 Sum_probs=212.7
Q ss_pred HcCCCCCCccccc--CCeeEEEEEeC-CCcEEEEEEeccCC--hhhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEE
Q 003158 510 TNNFNSSTQIGQG--GYGKVYKGILP-DGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQML 584 (843)
Q Consensus 510 ~~~~~~~~~lg~G--~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~l 584 (843)
.++|++.+.||+| +||+||+|+.. +++.||||++.... ....+.+.+|+++++.++||||+++++++.+.+..++
T Consensus 24 ~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 103 (389)
T 3gni_B 24 GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWV 103 (389)
T ss_dssp GGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred CCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEE
Confidence 4679999999999 99999999975 79999999997543 3334678899999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCC
Q 003158 585 VYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPV 664 (843)
Q Consensus 585 V~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~ 664 (843)
||||+++|+|.+++.......+++..++.++.||++||+|||+++ |+||||||+|||++.++.+||+|||.+.....
T Consensus 104 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~~ 180 (389)
T 3gni_B 104 VTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMG---YVHRSVKASHILISVDGKVYLSGLRSNLSMIS 180 (389)
T ss_dssp EEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCGGGCEECEE
T ss_pred EEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEcccccceeecc
Confidence 999999999999998776667999999999999999999999999 99999999999999999999999999865432
Q ss_pred CCCCCcccceeeeeecccCCccCchhccc--CCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhc
Q 003158 665 PDIEGIVPAHVSTVVKGTPGYLDPEYFLT--HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVI 742 (843)
Q Consensus 665 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 742 (843)
................||+.|+|||++.+ ..++.++|||||||++|||++|+.||............. . .......
T Consensus 181 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~-~-~~~~~~~ 258 (389)
T 3gni_B 181 HGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKL-N-GTVPCLL 258 (389)
T ss_dssp TTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHHC-----------
T ss_pred ccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHh-c-CCCCccc
Confidence 11111111111233468899999999987 678999999999999999999999997644322111100 0 0000000
Q ss_pred cCCCCCCCHHH-HHHH-HHHH---HHhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCCCCccC
Q 003158 743 DGNMGSYPSEC-VEKF-IKLA---LKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSM 817 (843)
Q Consensus 743 ~~~~~~~~~~~-~~~l-~~l~---~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~sa~e~ 817 (843)
+... .+.+. .... .... ..........||...+.. ........++.+.+|+.+||+.||++|||++|+
T Consensus 259 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~el 331 (389)
T 3gni_B 259 DTST--IPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSP-----SHPYHRTFSPHFHHFVEQCLQRNPDARPSASTL 331 (389)
T ss_dssp ------------------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHH
T ss_pred cccc--cccccccccccccccccccccccccCccccccCCCC-----CCccccccCHHHHHHHHHHhhcCcccCCCHHHH
Confidence 0000 00000 0000 0000 000000001111111100 000112234446689999999999999999999
Q ss_pred CCCCcccCCCC
Q 003158 818 LKHPYVSSDVS 828 (843)
Q Consensus 818 L~Hp~f~~~~~ 828 (843)
|+||||+....
T Consensus 332 l~hp~f~~~~~ 342 (389)
T 3gni_B 332 LNHSFFKQIKR 342 (389)
T ss_dssp TTSGGGGGC--
T ss_pred hcCHHHHHHhh
Confidence 99999987544
No 48
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.5e-42 Score=374.82 Aligned_cols=259 Identities=19% Similarity=0.341 Sum_probs=209.6
Q ss_pred HcCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCChhhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEEec
Q 003158 510 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 588 (843)
Q Consensus 510 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e~ 588 (843)
.++|++.+.||+|+||+||+|... +++.||+|.+... ......+.+|+++++.++||||+++++++.+.+..++||||
T Consensus 4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~ 82 (321)
T 1tki_A 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVK-GTDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEF 82 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCC-THHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECC
T ss_pred hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecC-cccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEe
Confidence 367899999999999999999965 6899999998754 33456788999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcC--CCcEEEeeccccccCCCCC
Q 003158 589 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDH--KFTAKVADFGLSRLAPVPD 666 (843)
Q Consensus 589 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~--~~~~kl~DfGla~~~~~~~ 666 (843)
+++|+|.+++... ...+++..++.++.|+++||.|||+++ |+||||||+|||++. ++.+||+|||+++.....
T Consensus 83 ~~g~~L~~~l~~~-~~~~~~~~~~~i~~qi~~al~~lH~~g---ivH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~- 157 (321)
T 1tki_A 83 ISGLDIFERINTS-AFELNEREIVSYVHQVCEALQFLHSHN---IGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPG- 157 (321)
T ss_dssp CCCCBHHHHHTSS-SCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESSSSCCCEEECCCTTCEECCTT-
T ss_pred CCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCC---CCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCC-
Confidence 9999999999653 345899999999999999999999999 999999999999997 789999999999876432
Q ss_pred CCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhccCCC
Q 003158 667 IEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNM 746 (843)
Q Consensus 667 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 746 (843)
.......||+.|+|||++.+..++.++|||||||++|||++|..||...... +.... +....
T Consensus 158 -------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~-~~~~~---------i~~~~- 219 (321)
T 1tki_A 158 -------DNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQ-QIIEN---------IMNAE- 219 (321)
T ss_dssp -------CEEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHH-HHHHH---------HHHTC-
T ss_pred -------CccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHH-HHHHH---------HHcCC-
Confidence 2234567999999999999988999999999999999999999999764421 11110 00000
Q ss_pred CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCCCCccCCCCCcccCC
Q 003158 747 GSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSSD 826 (843)
Q Consensus 747 ~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~sa~e~L~Hp~f~~~ 826 (843)
..++... ++..+..+.+|+.+||..||++|||++|+|+||||...
T Consensus 220 ~~~~~~~-----------------------------------~~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~hp~~~~~ 264 (321)
T 1tki_A 220 YTFDEEA-----------------------------------FKEISIEAMDFVDRLLVKERKSRMTASEALQHPWLKQK 264 (321)
T ss_dssp CCCCHHH-----------------------------------HTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHSC
T ss_pred CCCChhh-----------------------------------hccCCHHHHHHHHHHcCCChhHCcCHHHHhcChhhccC
Confidence 0011100 01222334578889999999999999999999999765
Q ss_pred C
Q 003158 827 V 827 (843)
Q Consensus 827 ~ 827 (843)
.
T Consensus 265 ~ 265 (321)
T 1tki_A 265 I 265 (321)
T ss_dssp G
T ss_pred c
Confidence 3
No 49
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=1.4e-42 Score=376.50 Aligned_cols=290 Identities=22% Similarity=0.401 Sum_probs=199.4
Q ss_pred HcCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCChh-hHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEEe
Q 003158 510 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ-GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 587 (843)
Q Consensus 510 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e 587 (843)
.++|++.+.||+|+||+||+|... +|+.||+|++...... ..+.+.+|+++++.++||||+++++++.+++..++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 83 (317)
T 2pmi_A 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFE 83 (317)
T ss_dssp ---------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEE
T ss_pred ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEE
Confidence 467999999999999999999964 6899999998754332 34678899999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhcC----CCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCC
Q 003158 588 FMSNGTLRDQLSAKS----KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAP 663 (843)
Q Consensus 588 ~~~~gsL~~~l~~~~----~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~ 663 (843)
|++ |+|.+++.... ...+++..++.++.||++||+|||+++ |+||||||+||+++.++.+||+|||+++...
T Consensus 84 ~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~---ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 159 (317)
T 2pmi_A 84 FMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENK---ILHRDLKPQNLLINKRGQLKLGDFGLARAFG 159 (317)
T ss_dssp CCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCSSCEETT
T ss_pred ecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCChHHeEEcCCCCEEECcCccceecC
Confidence 997 69999986532 245889999999999999999999999 9999999999999999999999999998654
Q ss_pred CCCCCCcccceeeeeecccCCccCchhccc-CCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhc
Q 003158 664 VPDIEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVI 742 (843)
Q Consensus 664 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 742 (843)
... .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||....... ....... ..
T Consensus 160 ~~~-------~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-~~~~i~~------~~ 225 (317)
T 2pmi_A 160 IPV-------NTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEE-QLKLIFD------IM 225 (317)
T ss_dssp SCC-------CCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHH------HH
T ss_pred CCc-------ccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHH------Hh
Confidence 321 11234468999999999986 468999999999999999999999997654322 1111110 00
Q ss_pred cCCCCCCCHHHHHHHHHHHHHhcccCCCCCC--CHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCCCCccCCCC
Q 003158 743 DGNMGSYPSECVEKFIKLALKCCQDETDARP--SMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKH 820 (843)
Q Consensus 743 ~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RP--s~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~sa~e~L~H 820 (843)
.. .+...+..+..+. -+..+...++ ...+. +.. ......+..+.+|+.+||+.||++|||++|+|+|
T Consensus 226 ~~----~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~---~~~--~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~h 294 (317)
T 2pmi_A 226 GT----PNESLWPSVTKLP--KYNPNIQQRPPRDLRQV---LQP--HTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHH 294 (317)
T ss_dssp CS----CCTTTCGGGGGCT--TCCTTCCCCCCCCSHHH---HGG--GCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred CC----CChhHhhhhhhhh--hcccccccccchhHHHh---hcc--cccccCCHHHHHHHHHHCCCCcccCCCHHHHhCC
Confidence 00 0000000000000 0000001111 11111 111 0111233446689999999999999999999999
Q ss_pred CcccCCCC
Q 003158 821 PYVSSDVS 828 (843)
Q Consensus 821 p~f~~~~~ 828 (843)
|||+.-..
T Consensus 295 p~f~~~~~ 302 (317)
T 2pmi_A 295 PWFAEYYH 302 (317)
T ss_dssp GGGGGGCC
T ss_pred hhhhcccc
Confidence 99976443
No 50
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=4.3e-42 Score=383.61 Aligned_cols=305 Identities=25% Similarity=0.345 Sum_probs=208.1
Q ss_pred HHcCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccC--ChhhHHHHHHHHHHHHhcc-CCcccceeeeeecC--CcE
Q 003158 509 ATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEG--SLQGEKEFLTEIQFLSRLH-HRNLVSLVGYCDEE--GEQ 582 (843)
Q Consensus 509 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~-h~nIv~l~~~~~~~--~~~ 582 (843)
..++|++.+.||+|+||.||+|... +|+.||||++... .....+++.+|+.+++.+. ||||+++++++..+ ...
T Consensus 7 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~ 86 (388)
T 3oz6_A 7 VLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDV 86 (388)
T ss_dssp HHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCE
T ss_pred ccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEE
Confidence 4678999999999999999999964 7999999998643 3344567889999999997 99999999999654 378
Q ss_pred EEEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccC
Q 003158 583 MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLA 662 (843)
Q Consensus 583 ~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~ 662 (843)
++|||||+ |+|.+++... .+++..+..++.||++||+|||+.+ |+||||||+|||++.++.+||+|||+|+..
T Consensus 87 ~lv~e~~~-~~L~~~~~~~---~~~~~~~~~i~~qi~~~L~~LH~~~---ivHrDlkp~NIll~~~~~~kl~DFG~a~~~ 159 (388)
T 3oz6_A 87 YLVFDYME-TDLHAVIRAN---ILEPVHKQYVVYQLIKVIKYLHSGG---LLHRDMKPSNILLNAECHVKVADFGLSRSF 159 (388)
T ss_dssp EEEEECCS-EEHHHHHHHT---CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEES
T ss_pred EEEecccC-cCHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhCC---EEeCCCCHHHeEEcCCCCEEecCCcccccc
Confidence 99999996 6999999753 5888999999999999999999999 999999999999999999999999999865
Q ss_pred CCCCCCC--------------cccceeeeeecccCCccCchhccc-CCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHH
Q 003158 663 PVPDIEG--------------IVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVR 727 (843)
Q Consensus 663 ~~~~~~~--------------~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~ 727 (843)
....... .......+...||+.|+|||++.+ ..++.++||||+||++|||++|+.||...... .
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~-~ 238 (388)
T 3oz6_A 160 VNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTM-N 238 (388)
T ss_dssp SSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-H
T ss_pred cccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCHH-H
Confidence 4211000 001122345679999999999987 67899999999999999999999999765432 2
Q ss_pred HHHHHhhccc--chhhccCCCCCCCHHHHHHHHHHHHHhcc-cCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCC
Q 003158 728 EVNIAYQSSM--MFSVIDGNMGSYPSECVEKFIKLALKCCQ-DETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEH 804 (843)
Q Consensus 728 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~l~~~c~~-~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L 804 (843)
+......... ....+......+... +.+-...... .....+..+......+... ......++.+.||+.+||
T Consensus 239 ~~~~i~~~~~~p~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~dll~~~L 313 (388)
T 3oz6_A 239 QLERIIGVIDFPSNEDVESIQSPFAKT----MIESLKEKVEIRQSNKRDIFTKWKNLLLKI-NPKADCNEEALDLLDKLL 313 (388)
T ss_dssp HHHHHHHHHCCCCHHHHHTSCCSSHHH----HHHHHHHHCC-----CCCCHHHHHHHHHHH-CTTCCCCHHHHHHHHHHC
T ss_pred HHHHHHHhcCCCCHHHHHhccCHHHHH----HHHhCcccccccCCCHHHhCcchhhhcccc-cccccCCHHHHHHHHHhh
Confidence 2222211000 000000000111111 1111111111 1122233333333322222 122234556779999999
Q ss_pred CCCCCCCCCCccCCCCCcccCC
Q 003158 805 TSKEETPPSSSSMLKHPYVSSD 826 (843)
Q Consensus 805 ~~dp~~R~sa~e~L~Hp~f~~~ 826 (843)
++||++|+||+|+|+||||+.-
T Consensus 314 ~~dP~~R~t~~e~l~Hp~~~~~ 335 (388)
T 3oz6_A 314 QFNPNKRISANDALKHPFVSIF 335 (388)
T ss_dssp CSSGGGSCCHHHHTTSTTTTTT
T ss_pred ccCcccCCCHHHHhCCHHHHHh
Confidence 9999999999999999999753
No 51
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=1.6e-41 Score=366.45 Aligned_cols=265 Identities=32% Similarity=0.495 Sum_probs=211.1
Q ss_pred HHHHHcCCCCCCcccccCCeeEEEEEeCCCcEEEEEEeccCC--hhhHHHHHHHHHHHHhccCCcccceeeeeecCCcEE
Q 003158 506 MALATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQM 583 (843)
Q Consensus 506 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~ 583 (843)
+....++|++.+.||+|+||+||+|.. +|+.||||++.... ....+++.+|++++++++||||+++++++.+.+..+
T Consensus 32 ~~i~~~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~ 110 (309)
T 3p86_A 32 MDIPWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLS 110 (309)
T ss_dssp CBCCGGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCE
T ss_pred ccCChhHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceE
Confidence 334456889999999999999999987 68899999987543 233467899999999999999999999999999999
Q ss_pred EEEecCCCCCHHHHHhhcCC-CCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccC
Q 003158 584 LVYEFMSNGTLRDQLSAKSK-EPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLA 662 (843)
Q Consensus 584 lV~e~~~~gsL~~~l~~~~~-~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~ 662 (843)
+||||+++|+|.+++..... ..+++..++.++.|+++||+|||+++ ++|+||||||+||+++.++.+||+|||+++..
T Consensus 111 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~-~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~ 189 (309)
T 3p86_A 111 IVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRN-PPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLK 189 (309)
T ss_dssp EEEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTSS-SCCCCTTCCGGGEEECTTCCEEECCCC-----
T ss_pred EEEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCC-CCEECCCCChhhEEEeCCCcEEECCCCCCccc
Confidence 99999999999999976432 24889999999999999999999875 45999999999999999999999999999754
Q ss_pred CCCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhc
Q 003158 663 PVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVI 742 (843)
Q Consensus 663 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 742 (843)
.... .......||+.|+|||++.+..++.++|||||||++|||++|+.||........ .... ..
T Consensus 190 ~~~~-------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~~-~~~~--------~~ 253 (309)
T 3p86_A 190 ASTF-------LSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQV-VAAV--------GF 253 (309)
T ss_dssp -------------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHHH-HHHH--------HH
T ss_pred cccc-------cccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHH--------Hh
Confidence 3221 122345699999999999999999999999999999999999999976543221 1110 11
Q ss_pred cCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhh
Q 003158 743 DGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNM 788 (843)
Q Consensus 743 ~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~ 788 (843)
.......+..+++.+.+++.+||+.+|.+||++.++++.|+.+.+.
T Consensus 254 ~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~ 299 (309)
T 3p86_A 254 KCKRLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKS 299 (309)
T ss_dssp SCCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC-
T ss_pred cCCCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence 2223345667778899999999999999999999999999988653
No 52
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=1.4e-41 Score=377.58 Aligned_cols=260 Identities=22% Similarity=0.397 Sum_probs=210.9
Q ss_pred HcCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCChhhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEEec
Q 003158 510 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 588 (843)
Q Consensus 510 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e~ 588 (843)
.++|++.+.||+|+||+||+|... +|+.||+|++..........+.+|+++++.++||||+++++++.+.+..++||||
T Consensus 50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~ 129 (387)
T 1kob_A 50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEF 129 (387)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEEC
T ss_pred ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEc
Confidence 357999999999999999999965 6899999999876655667899999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcC--CCcEEEeeccccccCCCCC
Q 003158 589 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDH--KFTAKVADFGLSRLAPVPD 666 (843)
Q Consensus 589 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~--~~~~kl~DfGla~~~~~~~ 666 (843)
+++|+|.+++... ...+++..++.++.||+.||+|||+++ |+||||||+|||++. ++.+||+|||+++.....
T Consensus 130 ~~gg~L~~~l~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~- 204 (387)
T 1kob_A 130 LSGGELFDRIAAE-DYKMSEAEVINYMRQACEGLKHMHEHS---IVHLDIKPENIMCETKKASSVKIIDFGLATKLNPD- 204 (387)
T ss_dssp CCCCBHHHHTTCT-TCCBCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESSTTCCCEEECCCTTCEECCTT-
T ss_pred CCCCcHHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHhCC---eeecccchHHeEEecCCCCceEEEecccceecCCC-
Confidence 9999999999653 346899999999999999999999999 999999999999974 578999999999876432
Q ss_pred CCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhccCCC
Q 003158 667 IEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNM 746 (843)
Q Consensus 667 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 746 (843)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||....... ...
T Consensus 205 -------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~-~~~---------------- 260 (387)
T 1kob_A 205 -------EIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLE-TLQ---------------- 260 (387)
T ss_dssp -------SCEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHH-HHH----------------
T ss_pred -------cceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHHH-HHH----------------
Confidence 12234569999999999999999999999999999999999999997643211 110
Q ss_pred CCCCHHHHHHHHHHHHHh-cccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCCCCccCCCCCcccC
Q 003158 747 GSYPSECVEKFIKLALKC-CQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSS 825 (843)
Q Consensus 747 ~~~~~~~~~~l~~l~~~c-~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~sa~e~L~Hp~f~~ 825 (843)
. +..+ +...+.. +...++.+.+|+.+||..||++|||++|+|+||||.+
T Consensus 261 ------------~-i~~~~~~~~~~~-----------------~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~ 310 (387)
T 1kob_A 261 ------------N-VKRCDWEFDEDA-----------------FSSVSPEAKDFIKNLLQKEPRKRLTVHDALEHPWLKG 310 (387)
T ss_dssp ------------H-HHHCCCCCCSST-----------------TTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTSTTTSS
T ss_pred ------------H-HHhCCCCCCccc-----------------cccCCHHHHHHHHHHcCCChhHCcCHHHHhhCccccC
Confidence 0 1111 1111100 0111223447888899999999999999999999987
Q ss_pred CCC
Q 003158 826 DVS 828 (843)
Q Consensus 826 ~~~ 828 (843)
+..
T Consensus 311 ~~~ 313 (387)
T 1kob_A 311 DHS 313 (387)
T ss_dssp CCT
T ss_pred Ccc
Confidence 543
No 53
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=2.4e-42 Score=397.11 Aligned_cols=203 Identities=24% Similarity=0.420 Sum_probs=179.2
Q ss_pred HcCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCCh---hhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEE
Q 003158 510 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLV 585 (843)
Q Consensus 510 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV 585 (843)
.++|...+.||+|+||+||+|+.. +|+.||+|++..... ...+.+.+|+++++.++||||+++++++.+.+..++|
T Consensus 184 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV 263 (543)
T 3c4z_A 184 EDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLV 263 (543)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEE
Confidence 467888999999999999999975 699999999975322 2346788999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhhcC--CCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCC
Q 003158 586 YEFMSNGTLRDQLSAKS--KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAP 663 (843)
Q Consensus 586 ~e~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~ 663 (843)
|||+++|+|.+++.... ...+++..++.++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++...
T Consensus 264 mE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~g---IvHrDLKP~NILl~~~g~vkL~DFGla~~~~ 340 (543)
T 3c4z_A 264 MTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELK 340 (543)
T ss_dssp ECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTSCEEECCCTTCEECC
T ss_pred EEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHcC---CcccCCChHHEEEeCCCCEEEeecceeeecc
Confidence 99999999999997643 446899999999999999999999999 9999999999999999999999999998754
Q ss_pred CCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCC
Q 003158 664 VPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 722 (843)
Q Consensus 664 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~ 722 (843)
... .......||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 341 ~~~-------~~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~ 392 (543)
T 3c4z_A 341 AGQ-------TKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRAR 392 (543)
T ss_dssp TTC-------CCBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCT
T ss_pred CCC-------cccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCC
Confidence 321 1123457999999999999999999999999999999999999999754
No 54
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=2.5e-40 Score=357.05 Aligned_cols=280 Identities=35% Similarity=0.610 Sum_probs=231.8
Q ss_pred CcccccHHHHHHHHcCCCCC------CcccccCCeeEEEEEeCCCcEEEEEEeccCC----hhhHHHHHHHHHHHHhccC
Q 003158 497 GVRSFTYGEMALATNNFNSS------TQIGQGGYGKVYKGILPDGTVVAVKRAQEGS----LQGEKEFLTEIQFLSRLHH 566 (843)
Q Consensus 497 ~~~~~~~~~~~~~~~~~~~~------~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~h 566 (843)
....|++.++..++++|... +.||+|+||+||+|.. +++.||||++.... ....+.+.+|+++++.++|
T Consensus 11 ~~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h 89 (307)
T 2nru_A 11 RFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQH 89 (307)
T ss_dssp CCEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCC
T ss_pred CCCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCC
Confidence 34678999999999999887 8999999999999987 68899999987432 2335688999999999999
Q ss_pred CcccceeeeeecCCcEEEEEecCCCCCHHHHHhhc-CCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEE
Q 003158 567 RNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAK-SKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILL 645 (843)
Q Consensus 567 ~nIv~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~-~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl 645 (843)
|||+++++++.+.+..++||||+++|+|.+++... ...++++..++.++.|+++||.|||+++ |+||||||+||++
T Consensus 90 ~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dlkp~Nili 166 (307)
T 2nru_A 90 ENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENH---HIHRDIKSANILL 166 (307)
T ss_dssp TTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEE
T ss_pred CCeEEEEEEEecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcCC---eecCCCCHHHEEE
Confidence 99999999999999999999999999999999753 2346899999999999999999999999 9999999999999
Q ss_pred cCCCcEEEeeccccccCCCCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCcch
Q 003158 646 DHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNI 725 (843)
Q Consensus 646 ~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~ 725 (843)
++++.+||+|||+++....... ........||+.|+|||.+.+ .++.++|||||||++|||++|+.||......
T Consensus 167 ~~~~~~kl~Dfg~~~~~~~~~~-----~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~ 240 (307)
T 2nru_A 167 DEAFTAKISDFGLARASEKFAQ-----TVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREP 240 (307)
T ss_dssp CTTCCEEECCCTTCEECCSCSS-----CEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSS
T ss_pred cCCCcEEEeecccccccccccc-----cccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcch
Confidence 9999999999999986543211 122234568999999998865 5789999999999999999999999764321
Q ss_pred ---HHHHHHHh-hcccchhhccCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhh
Q 003158 726 ---VREVNIAY-QSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIW 786 (843)
Q Consensus 726 ---~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~ 786 (843)
........ ....+...++......+..+++.+.+++..||+.+|.+||++.++++.|+++.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~ 305 (307)
T 2nru_A 241 QLLLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMT 305 (307)
T ss_dssp SBTTHHHHHHHTTSCCHHHHSCSSCSCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC
T ss_pred HHHHHHHHHhhhhhhhhhhhccccccccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHh
Confidence 11111111 11223344555566678889999999999999999999999999999999864
No 55
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=1.1e-41 Score=368.03 Aligned_cols=286 Identities=25% Similarity=0.357 Sum_probs=207.1
Q ss_pred HHHcCCCCCCcccccCCeeEEEEEe-CCCcEEEEEEeccCC-----hhhHHHHHHHHHHHHhcc---CCcccceeeeeec
Q 003158 508 LATNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGS-----LQGEKEFLTEIQFLSRLH---HRNLVSLVGYCDE 578 (843)
Q Consensus 508 ~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~---h~nIv~l~~~~~~ 578 (843)
...++|++.+.||+|+||+||+|.. .+++.||||++.... ......+.+|+++++.++ ||||+++++++..
T Consensus 6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~ 85 (308)
T 3g33_A 6 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCAT 85 (308)
T ss_dssp ----CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEE
T ss_pred ccccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeec
Confidence 4567999999999999999999996 478999999986322 111346677888777765 9999999999976
Q ss_pred CC-----cEEEEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEE
Q 003158 579 EG-----EQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKV 653 (843)
Q Consensus 579 ~~-----~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl 653 (843)
.. ..++||||+. |+|.+++.......+++..++.++.|+++||+|||+++ |+||||||+||+++.++.+||
T Consensus 86 ~~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dlkp~Nil~~~~~~~kl 161 (308)
T 3g33_A 86 SRTDREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKL 161 (308)
T ss_dssp CCSSSEEEEEEEEECCC-CBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCTTTEEECTTSCEEE
T ss_pred cCCCCceeEEEEehhhh-cCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEcCCCCEEE
Confidence 54 5799999996 69999998776666999999999999999999999999 999999999999999999999
Q ss_pred eeccccccCCCCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHh
Q 003158 654 ADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAY 733 (843)
Q Consensus 654 ~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~ 733 (843)
+|||+++...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||....... ......
T Consensus 162 ~Dfg~a~~~~~~~--------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~-~~~~i~ 232 (308)
T 3g33_A 162 ADFGLARIYSYQM--------ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEAD-QLGKIF 232 (308)
T ss_dssp CSCSCTTTSTTCC--------CSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHH-HHHHHH
T ss_pred eeCccccccCCCc--------ccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHH
Confidence 9999998654321 2234578999999999999999999999999999999999999997654322 111111
Q ss_pred hcccchhhccCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCCC
Q 003158 734 QSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPS 813 (843)
Q Consensus 734 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~s 813 (843)
.... .......+... .+....+ .+....... ...++....+.+|+.+||+.||++|||
T Consensus 233 ~~~~-----~~~~~~~~~~~-----~~~~~~~--~~~~~~~~~----------~~~~~~~~~~~~li~~~L~~dP~~R~t 290 (308)
T 3g33_A 233 DLIG-----LPPEDDWPRDV-----SLPRGAF--PPRGPRPVQ----------SVVPEMEESGAQLLLEMLTFNPHKRIS 290 (308)
T ss_dssp HHHC-----CCCTTTSCSSC-----SSCGGGS--CCCCCCCHH----------HHSCSCCHHHHHHHHHHTCSSTTTSCC
T ss_pred HHhC-----CCChhhccchh-----hcccccc--CCCCCCcHH----------HhCccccHHHHHHHHHHhcCCCccCCC
Confidence 1000 00000000000 0000000 011111111 122344455668999999999999999
Q ss_pred CccCCCCCcccCCCC
Q 003158 814 SSSMLKHPYVSSDVS 828 (843)
Q Consensus 814 a~e~L~Hp~f~~~~~ 828 (843)
++|+|+||||+.+..
T Consensus 291 ~~e~l~h~~~~~~~~ 305 (308)
T 3g33_A 291 AFRALQHSYLHKDEG 305 (308)
T ss_dssp HHHHHTSTTC-----
T ss_pred HHHHhcCccccCCCC
Confidence 999999999987643
No 56
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=9.1e-43 Score=396.22 Aligned_cols=271 Identities=21% Similarity=0.294 Sum_probs=205.3
Q ss_pred HcCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccC---ChhhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEE
Q 003158 510 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEG---SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLV 585 (843)
Q Consensus 510 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV 585 (843)
.++|++.+.||+|+||.||+|... +|+.||||++... .......+.+|+++++.++||||+++++++.+.+..++|
T Consensus 147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 226 (446)
T 4ejn_A 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFV 226 (446)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEE
T ss_pred hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEE
Confidence 467999999999999999999964 6899999998753 222345678899999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhc-CCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCC
Q 003158 586 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHT-EADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPV 664 (843)
Q Consensus 586 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~-~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~ 664 (843)
|||+++|+|.+++.... .+++..+..++.||++||+|||+ .+ |+||||||+|||++.++.+||+|||+|+....
T Consensus 227 ~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~g---iiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~ 301 (446)
T 4ejn_A 227 MEYANGGELFFHLSRER--VFSEDRARFYGAEIVSALDYLHSEKN---VVYRDLKLENLMLDKDGHIKITDFGLCKEGIK 301 (446)
T ss_dssp ECCCSSCBHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHHTC---CCCCCCCGGGEEECSSSCEEECCCCCCCTTCC
T ss_pred EeeCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHhhcCC---EEECCCCHHHEEECCCCCEEEccCCCceeccC
Confidence 99999999999997653 58899999999999999999998 88 99999999999999999999999999985432
Q ss_pred CCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhccC
Q 003158 665 PDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDG 744 (843)
Q Consensus 665 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 744 (843)
. ........||+.|+|||++.+..++.++|||||||++|||++|+.||...... ....... .
T Consensus 302 ~-------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~-~~~~~i~---------~- 363 (446)
T 4ejn_A 302 D-------GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE-KLFELIL---------M- 363 (446)
T ss_dssp ------------CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHH---------H-
T ss_pred C-------CcccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHH-HHHHHHH---------h-
Confidence 1 12234467999999999999999999999999999999999999999754321 1111000 0
Q ss_pred CCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCC-----CCccCCC
Q 003158 745 NMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPP-----SSSSMLK 819 (843)
Q Consensus 745 ~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~-----sa~e~L~ 819 (843)
....+|..+ .+.+.+||.+||..||++|+ ||+|+++
T Consensus 364 ~~~~~p~~~---------------------------------------~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~ 404 (446)
T 4ejn_A 364 EEIRFPRTL---------------------------------------GPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQ 404 (446)
T ss_dssp CCCCCCTTS---------------------------------------CHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred CCCCCCccC---------------------------------------CHHHHHHHHHHcccCHHHhCCCCCCCHHHHHh
Confidence 000111111 12233677778888888888 9999999
Q ss_pred CCcccCCCCCCccccccCCCCCC
Q 003158 820 HPYVSSDVSGSNLVSGVIPTITP 842 (843)
Q Consensus 820 Hp~f~~~~~~~~~~~~~~~~~~~ 842 (843)
||||.+..+.........|++.|
T Consensus 405 hp~f~~~~~~~~~~~~~~pp~~p 427 (446)
T 4ejn_A 405 HRFFAGIVWQHVYEKKLSPPFKP 427 (446)
T ss_dssp SGGGTTCCHHHHHTTCSCCSCCC
T ss_pred CccccCCCHHHHhhCcCCCCccC
Confidence 99999876654444445556655
No 57
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=9.7e-42 Score=371.24 Aligned_cols=259 Identities=22% Similarity=0.350 Sum_probs=208.6
Q ss_pred HcCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCChh------hHHHHHHHHHHHHhccCCcccceeeeeecCCcE
Q 003158 510 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ------GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQ 582 (843)
Q Consensus 510 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~ 582 (843)
.++|++.+.||+|+||.||+|... +|+.||+|++...... ..+.+.+|+++++.++||||+++++++.+.+..
T Consensus 10 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 89 (326)
T 2y0a_A 10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDV 89 (326)
T ss_dssp HHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred ccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEE
Confidence 457999999999999999999975 6899999998754322 356799999999999999999999999999999
Q ss_pred EEEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCC----cEEEeeccc
Q 003158 583 MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKF----TAKVADFGL 658 (843)
Q Consensus 583 ~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~----~~kl~DfGl 658 (843)
++||||+++|+|.+++... ..+++..++.++.||++||.|||+.+ |+||||||+||+++.++ .+||+|||+
T Consensus 90 ~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~ 164 (326)
T 2y0a_A 90 ILILELVAGGELFDFLAEK--ESLTEEEATEFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGL 164 (326)
T ss_dssp EEEEECCCSCBHHHHHTTS--SCCBHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESCSSSSSCCEEECCCTT
T ss_pred EEEEEcCCCCCHHHHHHhc--CCcCHHHHHHHHHHHHHHHHHHHHCC---eEcCCCCHHHEEEecCCCCCCCEEEEECCC
Confidence 9999999999999999653 45899999999999999999999999 99999999999999887 899999999
Q ss_pred cccCCCCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccc
Q 003158 659 SRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMM 738 (843)
Q Consensus 659 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~ 738 (843)
++...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||....... .....
T Consensus 165 a~~~~~~~--------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~-~~~~~------ 229 (326)
T 2y0a_A 165 AHKIDFGN--------EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE-TLANV------ 229 (326)
T ss_dssp CEECCTTS--------CCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHH-HHHHH------
T ss_pred CeECCCCC--------ccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHH-HHHHH------
Confidence 98764321 1234569999999999999999999999999999999999999997543211 11100
Q ss_pred hhhccCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCCCCccCC
Q 003158 739 FSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSML 818 (843)
Q Consensus 739 ~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~sa~e~L 818 (843)
... ...++... ++..+..+.+|+.+||..||++|||++|+|
T Consensus 230 ---~~~-~~~~~~~~-----------------------------------~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l 270 (326)
T 2y0a_A 230 ---SAV-NYEFEDEY-----------------------------------FSNTSALAKDFIRRLLVKDPKKRMTIQDSL 270 (326)
T ss_dssp ---HHT-CCCCCHHH-----------------------------------HTTSCHHHHHHHHHHSCSSGGGSCCHHHHH
T ss_pred ---Hhc-CCCcCccc-----------------------------------cccCCHHHHHHHHHHccCChhhCCCHHHHh
Confidence 000 00011100 011222334788889999999999999999
Q ss_pred CCCcccCCC
Q 003158 819 KHPYVSSDV 827 (843)
Q Consensus 819 ~Hp~f~~~~ 827 (843)
+||||....
T Consensus 271 ~hp~~~~~~ 279 (326)
T 2y0a_A 271 QHPWIKPKD 279 (326)
T ss_dssp HSTTTSCCS
T ss_pred cCCCccCCc
Confidence 999997654
No 58
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=1.9e-42 Score=382.66 Aligned_cols=202 Identities=27% Similarity=0.386 Sum_probs=168.5
Q ss_pred HcCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCCh---hhHHHHHHHHHH-HHhccCCcccceeeeeecCCcEEE
Q 003158 510 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQF-LSRLHHRNLVSLVGYCDEEGEQML 584 (843)
Q Consensus 510 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~-l~~l~h~nIv~l~~~~~~~~~~~l 584 (843)
.++|++.+.||+|+||+||+|+.. +++.||+|++..... ...+.+.+|..+ ++.++||||+++++++.+.+..++
T Consensus 37 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~l 116 (373)
T 2r5t_A 37 PSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYF 116 (373)
T ss_dssp GGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEE
Confidence 357889999999999999999975 689999999975432 223456677776 577899999999999999999999
Q ss_pred EEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCC
Q 003158 585 VYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPV 664 (843)
Q Consensus 585 V~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~ 664 (843)
||||+++|+|.+++.... .+++..++.++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++....
T Consensus 117 v~E~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~g~ikL~DFG~a~~~~~ 191 (373)
T 2r5t_A 117 VLDYINGGELFYHLQRER--CFLEPRARFYAAEIASALGYLHSLN---IVYRDLKPENILLDSQGHIVLTDFGLCKENIE 191 (373)
T ss_dssp EEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCCCBCGGGBC
T ss_pred EEeCCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCHHHEEECCCCCEEEeeCcccccccc
Confidence 999999999999997643 4788899999999999999999999 99999999999999999999999999986332
Q ss_pred CCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCc
Q 003158 665 PDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 723 (843)
Q Consensus 665 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~ 723 (843)
. ........||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 192 ~-------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~ 243 (373)
T 2r5t_A 192 H-------NSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRN 243 (373)
T ss_dssp C-------CCCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSB
T ss_pred C-------CCccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCC
Confidence 1 112345679999999999999999999999999999999999999997543
No 59
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=1.4e-41 Score=359.45 Aligned_cols=257 Identities=30% Similarity=0.488 Sum_probs=216.1
Q ss_pred HcCCCCCCcccccCCeeEEEEEeCCCcEEEEEEeccCChhhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEEecC
Q 003158 510 TNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFM 589 (843)
Q Consensus 510 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e~~ 589 (843)
.++|++.+.||+|+||+||+|...+++.||+|++.... ...+++.+|++++++++||||+++++++.+.+..++||||+
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 87 (269)
T 4hcu_A 9 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFM 87 (269)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred hhhceeeheecCCCccEEEEEEecCCCeEEEEEecccc-cCHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeC
Confidence 46788899999999999999998889999999998643 33467999999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCCCC
Q 003158 590 SNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEG 669 (843)
Q Consensus 590 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~ 669 (843)
++++|.+++.... ..+++..++.++.|+++||+|||+++ |+||||||+||+++.++.+||+|||+++......
T Consensus 88 ~~~~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~--- 160 (269)
T 4hcu_A 88 EHGCLSDYLRTQR-GLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ--- 160 (269)
T ss_dssp TTCBHHHHHHTTT-TCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHH---
T ss_pred CCCcHHHHHHhcC-cccCHHHHHHHHHHHHHHHHHHHhCC---eecCCcchheEEEcCCCCEEeccccccccccccc---
Confidence 9999999996543 45889999999999999999999999 9999999999999999999999999998654221
Q ss_pred cccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHh-CCCCCCCCcchHHHHHHHhhcccchhhccCCCCC
Q 003158 670 IVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGS 748 (843)
Q Consensus 670 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 748 (843)
........+++.|+|||.+.+..++.++||||+||++|||++ |+.||...... .... .+..+....
T Consensus 161 ---~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~-~~~~---------~~~~~~~~~ 227 (269)
T 4hcu_A 161 ---YTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNS-EVVE---------DISTGFRLY 227 (269)
T ss_dssp ---HHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH-HHHH---------HHHTTCCCC
T ss_pred ---cccccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHH-HHHH---------HHhcCccCC
Confidence 111223446778999999999999999999999999999999 99999765432 1111 112222333
Q ss_pred CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhh
Q 003158 749 YPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWN 787 (843)
Q Consensus 749 ~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~ 787 (843)
.+..+++.+.+++..||+.+|.+||++.++++.|+.+.+
T Consensus 228 ~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l~~ 266 (269)
T 4hcu_A 228 KPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAE 266 (269)
T ss_dssp CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCCcCCHHHHHHHHHHccCCcccCcCHHHHHHHHHHHHH
Confidence 455567789999999999999999999999999998764
No 60
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=2e-41 Score=358.06 Aligned_cols=259 Identities=27% Similarity=0.442 Sum_probs=217.0
Q ss_pred HHcCCCCCCcccccCCeeEEEEEeCCCcEEEEEEeccCChhhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEEec
Q 003158 509 ATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 588 (843)
Q Consensus 509 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e~ 588 (843)
..++|++.+.||+|+||+||+|...++..||+|++..... ..+++.+|++++++++||||+++++++.+.+..++||||
T Consensus 6 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (268)
T 3sxs_A 6 KREEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSM-SEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEY 84 (268)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTTB-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEEC
T ss_pred chhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCCC-cHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEc
Confidence 3568899999999999999999998888999999986432 346789999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCCC
Q 003158 589 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 668 (843)
Q Consensus 589 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 668 (843)
+++++|.+++.... ..+++..++.++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||++.......
T Consensus 85 ~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~-- 158 (268)
T 3sxs_A 85 ISNGCLLNYLRSHG-KGLEPSQLLEMCYDVCEGMAFLESHQ---FIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQ-- 158 (268)
T ss_dssp CTTCBHHHHHHHHG-GGCCHHHHHHHHHHHHHHHHHHHHTT---EEESSCSGGGEEECTTCCEEECCTTCEEECCTTC--
T ss_pred cCCCcHHHHHHHcC-CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCcCcceEEECCCCCEEEccCccceecchhh--
Confidence 99999999997643 35889999999999999999999999 9999999999999999999999999998654322
Q ss_pred CcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHh-CCCCCCCCcchHHHHHHHhhcccchhhccCCCC
Q 003158 669 GIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGNMG 747 (843)
Q Consensus 669 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 747 (843)
........+|+.|+|||.+.+..++.++||||||+++|||++ |+.||.......... .+..+...
T Consensus 159 ----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~----------~~~~~~~~ 224 (268)
T 3sxs_A 159 ----YVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVL----------KVSQGHRL 224 (268)
T ss_dssp ----EEECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHH----------HHHTTCCC
T ss_pred ----hhcccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHHHHH----------HHHcCCCC
Confidence 122233456778999999999899999999999999999999 999997654322111 11222223
Q ss_pred CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhh
Q 003158 748 SYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNM 788 (843)
Q Consensus 748 ~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~ 788 (843)
..+..+++.+.+++..||+.+|.+||++.++++.|+.+.+.
T Consensus 225 ~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~ 265 (268)
T 3sxs_A 225 YRPHLASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLREK 265 (268)
T ss_dssp CCCTTSCHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGCC-
T ss_pred CCCCcChHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhhc
Confidence 33455667899999999999999999999999999987543
No 61
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=2e-41 Score=366.25 Aligned_cols=268 Identities=23% Similarity=0.426 Sum_probs=215.8
Q ss_pred HcCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCChhhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEEec
Q 003158 510 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 588 (843)
Q Consensus 510 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e~ 588 (843)
.++|.+.+.||+|+||+||+|... +++.||+|++........+.+.+|+++++.++||||+++++++.+++..++||||
T Consensus 9 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 88 (310)
T 3s95_A 9 PSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEY 88 (310)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hhHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEe
Confidence 457888999999999999999975 6899999998776666778899999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCCC
Q 003158 589 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 668 (843)
Q Consensus 589 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 668 (843)
+++|+|.+++... ...+++..++.++.|+++||+|||+++ |+||||||+||+++.++.+||+|||+++........
T Consensus 89 ~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 164 (310)
T 3s95_A 89 IKGGTLRGIIKSM-DSQYPWSQRVSFAKDIASGMAYLHSMN---IIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQ 164 (310)
T ss_dssp CTTCBHHHHHHHC-CTTSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSTTSEEECTTSCEEECCCTTCEECC-----
T ss_pred cCCCcHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCCcCeEEECCCCCEEEeecccceeccccccc
Confidence 9999999999764 345899999999999999999999999 999999999999999999999999999876433211
Q ss_pred Ccc-------cceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhh
Q 003158 669 GIV-------PAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSV 741 (843)
Q Consensus 669 ~~~-------~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~ 741 (843)
... .........||+.|+|||++.+..++.++|||||||++|||++|..|+.......... .......
T Consensus 165 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~-----~~~~~~~ 239 (310)
T 3s95_A 165 PEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDF-----GLNVRGF 239 (310)
T ss_dssp ---------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTS-----SBCHHHH
T ss_pred ccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHH-----hhhhhcc
Confidence 000 0011124579999999999999999999999999999999999999986432110000 0000000
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhC
Q 003158 742 IDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMM 789 (843)
Q Consensus 742 ~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~ 789 (843)
.. ...+..+++.+.+++.+||+.+|++||++.++++.|+.+....
T Consensus 240 ~~---~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~~~~ 284 (310)
T 3s95_A 240 LD---RYCPPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRMHL 284 (310)
T ss_dssp HH---HTCCTTCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred cc---ccCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhc
Confidence 00 0123445667899999999999999999999999999987654
No 62
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=3.7e-42 Score=374.97 Aligned_cols=254 Identities=22% Similarity=0.330 Sum_probs=204.3
Q ss_pred cCCCCCCcccccCCeeEEEEEe-CCCcEEEEEEeccCCh---hhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEE
Q 003158 511 NNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 586 (843)
Q Consensus 511 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~ 586 (843)
++|.+.+.||+|+||+||+|.. .+++.||||++..... ...+.+.+|+++++.++||||+++++++.+.+..++||
T Consensus 9 ~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 88 (336)
T 3h4j_B 9 GPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVI 88 (336)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 5788999999999999999996 5789999999874321 12357899999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCC
Q 003158 587 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 666 (843)
Q Consensus 587 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~ 666 (843)
||+ +|+|.+++.... .+++..++.++.|++.||.|||+++ |+||||||+|||+++++.+||+|||++......
T Consensus 89 E~~-~g~l~~~l~~~~--~l~~~~~~~i~~qi~~aL~~LH~~g---ivH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~- 161 (336)
T 3h4j_B 89 EYA-GGELFDYIVEKK--RMTEDEGRRFFQQIICAIEYCHRHK---IVHRDLKPENLLLDDNLNVKIADFGLSNIMTDG- 161 (336)
T ss_dssp CCC-CEEHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHHT---CCCCCCSTTTEEECTTCCEEECCSSCTBTTTTS-
T ss_pred ECC-CCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCchhhEEEcCCCCEEEEEeccceeccCC-
Confidence 999 789999987653 4889999999999999999999999 999999999999999999999999999865432
Q ss_pred CCCcccceeeeeecccCCccCchhcccCCC-CchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhccCC
Q 003158 667 IEGIVPAHVSTVVKGTPGYLDPEYFLTHKL-TDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGN 745 (843)
Q Consensus 667 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 745 (843)
.......||+.|+|||++.+..+ +.++|||||||++|||++|+.||...... .+...+...
T Consensus 162 -------~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~-----------~~~~~i~~~ 223 (336)
T 3h4j_B 162 -------NFLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIP-----------NLFKKVNSC 223 (336)
T ss_dssp -------BTTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSST-----------TCBCCCCSS
T ss_pred -------cccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHH-----------HHHHHHHcC
Confidence 12234569999999999988776 68999999999999999999999653210 011111111
Q ss_pred CCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCCCCccCCCCCcccC
Q 003158 746 MGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSS 825 (843)
Q Consensus 746 ~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~sa~e~L~Hp~f~~ 825 (843)
....|..+ ++.+.+|+++||+.||++|||++|+++||||+.
T Consensus 224 ~~~~p~~~---------------------------------------s~~~~~li~~~L~~dP~~Rpt~~eil~hp~~~~ 264 (336)
T 3h4j_B 224 VYVMPDFL---------------------------------------SPGAQSLIRRMIVADPMQRITIQEIRRDPWFNV 264 (336)
T ss_dssp CCCCCTTS---------------------------------------CHHHHHHHHTTSCSSGGGSCCHHHHTTCHHHHT
T ss_pred CCCCcccC---------------------------------------CHHHHHHHHHHcCCChhHCcCHHHHHhChhhcc
Confidence 11111111 122336788889999999999999999999986
Q ss_pred CCC
Q 003158 826 DVS 828 (843)
Q Consensus 826 ~~~ 828 (843)
+..
T Consensus 265 ~~~ 267 (336)
T 3h4j_B 265 NLP 267 (336)
T ss_dssp TCC
T ss_pred CCc
Confidence 543
No 63
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=3.1e-42 Score=392.47 Aligned_cols=265 Identities=24% Similarity=0.439 Sum_probs=220.9
Q ss_pred HHHHHHHHcCCCCCCcccccCCeeEEEEEeCCCcEEEEEEeccCChhhHHHHHHHHHHHHhccCCcccceeeeeecCCcE
Q 003158 503 YGEMALATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQ 582 (843)
Q Consensus 503 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~ 582 (843)
.+++.+..++|++.+.||+|+||+||+|.+.++..||||+++... ...+++.+|+++++.++||||+++++++. .+..
T Consensus 180 ~~~~~i~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~ 257 (454)
T 1qcf_A 180 KDAWEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPI 257 (454)
T ss_dssp TTCSBCCGGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSC
T ss_pred ccceeechHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCC-ccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCcc
Confidence 344556678899999999999999999999888999999998643 34678999999999999999999999987 5678
Q ss_pred EEEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccC
Q 003158 583 MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLA 662 (843)
Q Consensus 583 ~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~ 662 (843)
++||||+++|+|.++++......+++..++.++.||++||+|||+++ |+||||||+|||++.++.+||+|||+++..
T Consensus 258 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivHrDlkp~Nill~~~~~~kl~DFG~a~~~ 334 (454)
T 1qcf_A 258 YIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRN---YIHRDLRAANILVSASLVCKIADFGLARVI 334 (454)
T ss_dssp EEEECCCTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCSGGGEEECTTCCEEECSTTGGGGB
T ss_pred EEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCCHHHEEECCCCcEEEeeCCCceEc
Confidence 99999999999999997654445788899999999999999999999 999999999999999999999999999865
Q ss_pred CCCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHh-CCCCCCCCcchHHHHHHHhhcccchhh
Q 003158 663 PVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSV 741 (843)
Q Consensus 663 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~ 741 (843)
.... ........+++.|+|||++....++.++|||||||++|||+| |+.||...... +... .+
T Consensus 335 ~~~~------~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~-~~~~---------~i 398 (454)
T 1qcf_A 335 EDNE------YTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNP-EVIR---------AL 398 (454)
T ss_dssp CCHH------HHTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH-HHHH---------HH
T ss_pred CCCc------eeccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHH-HHHH---------HH
Confidence 4211 011123346778999999999999999999999999999999 99999765432 1111 11
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhh
Q 003158 742 IDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNM 788 (843)
Q Consensus 742 ~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~ 788 (843)
..+.....|..+++.+.+++.+||+.+|++||++.++++.|+++...
T Consensus 399 ~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~~~ 445 (454)
T 1qcf_A 399 ERGYRMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYTA 445 (454)
T ss_dssp HHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSSS
T ss_pred HcCCCCCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHhc
Confidence 22223345667788999999999999999999999999999987654
No 64
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=1.8e-41 Score=383.14 Aligned_cols=259 Identities=23% Similarity=0.342 Sum_probs=206.7
Q ss_pred HHcCCCCCCcccccCCeeEEEEEe-CCCcEEEEEEeccCCh--hhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEE
Q 003158 509 ATNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLV 585 (843)
Q Consensus 509 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV 585 (843)
..++|++.+.||+|+||+||+|.. .+|+.||+|++..... ...+.+.+|+++++.++||||+++++++.+++..++|
T Consensus 9 ~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv 88 (444)
T 3soa_A 9 FTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLI 88 (444)
T ss_dssp HHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEE
T ss_pred ccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEE
Confidence 467899999999999999999996 4789999999876443 2346789999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEc---CCCcEEEeeccccccC
Q 003158 586 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLD---HKFTAKVADFGLSRLA 662 (843)
Q Consensus 586 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~---~~~~~kl~DfGla~~~ 662 (843)
|||+++|+|.+++.... .+++..+..++.||++||.|||+++ |+||||||+|||++ .++.+||+|||++...
T Consensus 89 ~E~~~gg~L~~~i~~~~--~~~e~~~~~i~~qil~aL~~lH~~g---ivHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~ 163 (444)
T 3soa_A 89 FDLVTGGELFEDIVARE--YYSEADASHCIQQILEAVLHCHQMG---VVHRNLKPENLLLASKLKGAAVKLADFGLAIEV 163 (444)
T ss_dssp ECCCBCCBHHHHHHHCS--CCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCSSTTEEESBSSTTCCEEECCCSSCBCC
T ss_pred EEeCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEEeccCCCCcEEEccCceeEEe
Confidence 99999999999997653 4889999999999999999999999 99999999999998 4678999999999865
Q ss_pred CCCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhc
Q 003158 663 PVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVI 742 (843)
Q Consensus 663 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 742 (843)
.... .......||+.|+|||++.+..++.++||||+||++|||++|+.||....... ...
T Consensus 164 ~~~~-------~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~~-~~~------------ 223 (444)
T 3soa_A 164 EGEQ-------QAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHR-LYQ------------ 223 (444)
T ss_dssp CTTC-------CBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHH------------
T ss_pred cCCC-------ceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHHH-HHH------------
Confidence 4321 12234579999999999999999999999999999999999999997543211 110
Q ss_pred cCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCCCCccCCCCCc
Q 003158 743 DGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPY 822 (843)
Q Consensus 743 ~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~sa~e~L~Hp~ 822 (843)
.+........+.. ++..++.+.+|+.+||+.||++|||++|+|+|||
T Consensus 224 ----------------~i~~~~~~~~~~~-----------------~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~hp~ 270 (444)
T 3soa_A 224 ----------------QIKAGAYDFPSPE-----------------WDTVTPEAKDLINKMLTINPSKRITAAEALKHPW 270 (444)
T ss_dssp ----------------HHHHTCCCCCTTT-----------------TTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSCT
T ss_pred ----------------HHHhCCCCCCccc-----------------cccCCHHHHHHHHHHcCCChhHCCCHHHHhcCcc
Confidence 0000000000000 0111233447888899999999999999999999
Q ss_pred ccC
Q 003158 823 VSS 825 (843)
Q Consensus 823 f~~ 825 (843)
|+.
T Consensus 271 ~~~ 273 (444)
T 3soa_A 271 ISH 273 (444)
T ss_dssp THH
T ss_pred ccC
Confidence 964
No 65
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=6.8e-42 Score=379.06 Aligned_cols=253 Identities=25% Similarity=0.371 Sum_probs=201.8
Q ss_pred CCcccccCCeeEEEEEe-CCCcEEEEEEeccCChhhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEEecCCCCCH
Q 003158 516 STQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTL 594 (843)
Q Consensus 516 ~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e~~~~gsL 594 (843)
.+.||+|+||.||+|.. .+|+.||+|++........+++.+|++++++++||||+++++++.+.+..++||||+++|+|
T Consensus 94 ~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~~L 173 (373)
T 2x4f_A 94 TEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGEL 173 (373)
T ss_dssp EEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCEE
T ss_pred ceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCcH
Confidence 56799999999999996 46999999999876666677899999999999999999999999999999999999999999
Q ss_pred HHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEE--cCCCcEEEeeccccccCCCCCCCCccc
Q 003158 595 RDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILL--DHKFTAKVADFGLSRLAPVPDIEGIVP 672 (843)
Q Consensus 595 ~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl--~~~~~~kl~DfGla~~~~~~~~~~~~~ 672 (843)
.+++... ...+++..++.++.||++||+|||+.+ |+||||||+|||+ +.++.+||+|||+++......
T Consensus 174 ~~~l~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~------ 243 (373)
T 2x4f_A 174 FDRIIDE-SYNLTELDTILFMKQICEGIRHMHQMY---ILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPRE------ 243 (373)
T ss_dssp HHHHHHT-GGGCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTC------
T ss_pred HHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCC---cccccCCHHHEEEecCCCCcEEEEeCCCceecCCcc------
Confidence 9988653 235889999999999999999999999 9999999999999 567899999999998764322
Q ss_pred ceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhccCCCCCCCHH
Q 003158 673 AHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSE 752 (843)
Q Consensus 673 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 752 (843)
......||+.|+|||++.+..++.++|||||||++|||++|+.||....... .
T Consensus 244 --~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~-~------------------------ 296 (373)
T 2x4f_A 244 --KLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAE-T------------------------ 296 (373)
T ss_dssp --BCCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHHH-H------------------------
T ss_pred --ccccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHH-H------------------------
Confidence 1233469999999999999999999999999999999999999997544211 1
Q ss_pred HHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCCCCccCCCCCcccCC
Q 003158 753 CVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSSD 826 (843)
Q Consensus 753 ~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~sa~e~L~Hp~f~~~ 826 (843)
+.++....+...+.. ++...+.+.+||.+||+.||++|||++|+|+||||+..
T Consensus 297 ----~~~i~~~~~~~~~~~-----------------~~~~~~~~~~li~~~L~~dp~~Rps~~e~l~hp~~~~~ 349 (373)
T 2x4f_A 297 ----LNNILACRWDLEDEE-----------------FQDISEEAKEFISKLLIKEKSWRISASEALKHPWLSDH 349 (373)
T ss_dssp ----HHHHHHTCCCSCSGG-----------------GTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHCH
T ss_pred ----HHHHHhccCCCChhh-----------------hccCCHHHHHHHHHHcCCChhhCCCHHHHhcCcCcCCC
Confidence 111111111111110 11223334578999999999999999999999999764
No 66
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=3.6e-42 Score=391.92 Aligned_cols=284 Identities=21% Similarity=0.321 Sum_probs=206.8
Q ss_pred HcCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccC--ChhhHHHHHHHHHHHHhccCCcccceeeeeecC------C
Q 003158 510 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEG--SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE------G 580 (843)
Q Consensus 510 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~------~ 580 (843)
.++|++.+.||+|+||+||+|... +++.||||++... .....+++.+|+++++.++||||+++++++... .
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 140 (464)
T 3ttj_A 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ 140 (464)
T ss_dssp ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCC
T ss_pred cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCC
Confidence 468999999999999999999964 6899999999753 233456789999999999999999999999654 3
Q ss_pred cEEEEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccc
Q 003158 581 EQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSR 660 (843)
Q Consensus 581 ~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~ 660 (843)
..++||||+++ +|.+.+.. .+++..++.++.||++||+|||+++ |+||||||+|||++.++.+||+|||+|+
T Consensus 141 ~~~lv~E~~~~-~l~~~~~~----~l~~~~~~~~~~qil~aL~~lH~~~---iiHrDlkp~NIll~~~~~~kl~DFG~a~ 212 (464)
T 3ttj_A 141 DVYLVMELMDA-NLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR 212 (464)
T ss_dssp EEEEEEECCSE-EHHHHHTS----CCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCCCCC-
T ss_pred eEEEEEeCCCC-CHHHHHhh----cCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCChHhEEEeCCCCEEEEEEEeee
Confidence 57999999965 57777643 3888999999999999999999999 9999999999999999999999999998
Q ss_pred cCCCCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchh
Q 003158 661 LAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFS 740 (843)
Q Consensus 661 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~ 740 (843)
..... ...+...||+.|+|||++.+..++.++||||+||++|||++|+.||...... +++.....
T Consensus 213 ~~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~-~~~~~i~~------ 277 (464)
T 3ttj_A 213 TAGTS--------FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYI-DQWNKVIE------ 277 (464)
T ss_dssp ----C--------CCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHH------
T ss_pred ecCCC--------cccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHH------
Confidence 65421 2234567999999999999999999999999999999999999999765433 22222111
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHhcccCCCCC-CCHHHHHHHHHHhhhhCCCC-------CCCCCccccCCCCCCCCCCC
Q 003158 741 VIDGNMGSYPSECVEKFIKLALKCCQDETDAR-PSMSEVMRELESIWNMMPES-------DTKTPEFINSEHTSKEETPP 812 (843)
Q Consensus 741 ~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~R-Ps~~~vl~~L~~~~~~~~~~-------~~~~~dll~~~L~~dp~~R~ 812 (843)
. .+..+.+....+...........|... ..+..... . ..++.. .+.+.|||.+||++||++|+
T Consensus 278 ~----lg~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~--~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ 348 (464)
T 3ttj_A 278 Q----LGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFP---D--SLFPADSEHNKLKASQARDLLSKMLVIDPAKRI 348 (464)
T ss_dssp H----HCSCCHHHHTTSCHHHHHHHTTSCCCCCCCHHHHSC---G--GGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSC
T ss_pred h----cCCCCHHHHHHcchhhhhHhhcccccCCCChHHhCc---c--cccccccccccccCHHHHHHHHHHcCCChhhCC
Confidence 0 111222222222222222222222211 12221100 0 000000 22356899999999999999
Q ss_pred CCccCCCCCcccC
Q 003158 813 SSSSMLKHPYVSS 825 (843)
Q Consensus 813 sa~e~L~Hp~f~~ 825 (843)
||+|+|+||||+.
T Consensus 349 ta~e~L~Hp~~~~ 361 (464)
T 3ttj_A 349 SVDDALQHPYINV 361 (464)
T ss_dssp CHHHHHTSTTTGG
T ss_pred CHHHHhcChhhhh
Confidence 9999999999974
No 67
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=1.6e-41 Score=364.29 Aligned_cols=272 Identities=25% Similarity=0.406 Sum_probs=215.0
Q ss_pred HcCCCCCCcccccCCeeEEEEEe-----CCCcEEEEEEeccCChhhHHHHHHHHHHHHhccCCcccceeeeeec--CCcE
Q 003158 510 TNNFNSSTQIGQGGYGKVYKGIL-----PDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDE--EGEQ 582 (843)
Q Consensus 510 ~~~~~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~--~~~~ 582 (843)
.++|++.+.||+|+||+||+|++ .+++.||||++........+.+.+|++++++++||||+++++++.. ....
T Consensus 9 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 88 (295)
T 3ugc_A 9 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL 88 (295)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSC
T ss_pred HHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCce
Confidence 46888999999999999999984 3689999999987666667789999999999999999999999854 4568
Q ss_pred EEEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccC
Q 003158 583 MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLA 662 (843)
Q Consensus 583 ~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~ 662 (843)
++||||+++|+|.+++.... ..+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++..
T Consensus 89 ~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~ 164 (295)
T 3ugc_A 89 KLIMEYLPYGSLRDYLQKHK-ERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRVKIGDFGLTKVL 164 (295)
T ss_dssp EEEEECCTTCBHHHHHHHCG-GGCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECCCCSCC--
T ss_pred EEEEEeCCCCCHHHHHHhcc-cccCHHHHHHHHHHHHHHHHHHhcCC---cccCCCCHhhEEEcCCCeEEEccCcccccc
Confidence 99999999999999997643 35889999999999999999999999 999999999999999999999999999876
Q ss_pred CCCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHH------hhcc
Q 003158 663 PVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIA------YQSS 736 (843)
Q Consensus 663 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~------~~~~ 736 (843)
...... ........++..|+|||.+.+..++.++|||||||++|||++|..|+............. ....
T Consensus 165 ~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (295)
T 3ugc_A 165 PQDKEF----FKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFH 240 (295)
T ss_dssp ---------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHH
T ss_pred cCCcce----eeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHH
Confidence 432210 112233457778999999999999999999999999999999999986432111000000 0000
Q ss_pred cchhhccCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhC
Q 003158 737 MMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMM 789 (843)
Q Consensus 737 ~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~ 789 (843)
....+........+..+++++.+++..||+.+|.+||++.++++.|+.+.+.+
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~~l 293 (295)
T 3ugc_A 241 LIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 293 (295)
T ss_dssp HHHHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHC-
T ss_pred HHHHHhccCcCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhc
Confidence 11122233344557778889999999999999999999999999999987654
No 68
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=1.7e-41 Score=387.28 Aligned_cols=297 Identities=22% Similarity=0.293 Sum_probs=196.7
Q ss_pred cCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccC--ChhhHHHHHHHHHHHHhccCCcccceeeeeec-----CCcE
Q 003158 511 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEG--SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDE-----EGEQ 582 (843)
Q Consensus 511 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~-----~~~~ 582 (843)
++|++.+.||+|+||+||+|... +++.||||++... .....+++.+|+++++.++||||+++++++.. ....
T Consensus 53 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 132 (458)
T 3rp9_A 53 DRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDEL 132 (458)
T ss_dssp TTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCE
T ss_pred CCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCceE
Confidence 68999999999999999999965 7899999998653 23345788999999999999999999999843 3578
Q ss_pred EEEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccC
Q 003158 583 MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLA 662 (843)
Q Consensus 583 ~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~ 662 (843)
++||||+ +|+|.+++... ..+++..++.++.||++||+|||+.+ ||||||||+|||++.++.+||+|||+|+..
T Consensus 133 ~lv~e~~-~~~L~~~~~~~--~~l~~~~~~~~~~qi~~aL~~LH~~~---iiHrDlKp~NILl~~~~~~kl~DFGla~~~ 206 (458)
T 3rp9_A 133 YVVLEIA-DSDFKKLFRTP--VYLTELHIKTLLYNLLVGVKYVHSAG---ILHRDLKPANCLVNQDCSVKVCDFGLARTV 206 (458)
T ss_dssp EEEECCC-SEEHHHHHHSS--CCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTCCEEECCCTTCBCT
T ss_pred EEEEecc-ccchhhhcccC--CCCCHHHHHHHHHHHHHHHHHHHhCC---cCCCCCChhhEEECCCCCEeecccccchhc
Confidence 9999998 57999999654 45899999999999999999999999 999999999999999999999999999876
Q ss_pred CCCCCCCcc--------------------cceeeeeecccCCccCchhcc-cCCCCchhhhHHHHHHHHHHHhC------
Q 003158 663 PVPDIEGIV--------------------PAHVSTVVKGTPGYLDPEYFL-THKLTDKSDVYSLGVVFLELLTG------ 715 (843)
Q Consensus 663 ~~~~~~~~~--------------------~~~~~~~~~gt~~y~aPE~~~-~~~~~~~sDvwS~G~~l~elltg------ 715 (843)
......... .....+...||+.|+|||++. +..++.++|||||||++|||++|
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg~~~~~~ 286 (458)
T 3rp9_A 207 DYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKENVA 286 (458)
T ss_dssp TSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTTSTTTCS
T ss_pred cCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHhcccccc
Confidence 532211000 011234567899999999874 56799999999999999999994
Q ss_pred -----CCCCCCCcchHHHHHHHhhcccchhhccCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHH--------HHHH
Q 003158 716 -----MQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEV--------MREL 782 (843)
Q Consensus 716 -----~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v--------l~~L 782 (843)
+.+|............ ................+..+...+ . .|+..++ ...+
T Consensus 287 ~~~~~~p~f~g~~~~~~~~~~---------~~~~~~~~~~~~~~~~l~~i~~~~-g-----~p~~~~~~~~~~~~~~~~~ 351 (458)
T 3rp9_A 287 YHADRGPLFPGSSCFPLSPDQ---------KAGNDFKFHTRGNRDQLNVIFNIL-G-----TPSEEDIEALEKEDAKRYI 351 (458)
T ss_dssp SGGGCCCSCC-----------------------------CHHHHHHHHHHHHHH-C-----CCCHHHHHTSSCHHHHHHH
T ss_pred ccccccccCCCCccccccccc---------cccccccccccCCHHHHHHHHHHc-C-----CCCHHHHhhcCCHHHHHHH
Confidence 4444322110000000 000000000111111221111111 0 1111111 0000
Q ss_pred H--------HhhhhCCCCCCCCCccccCCCCCCCCCCCCCccCCCCCcccCCCC
Q 003158 783 E--------SIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSSDVS 828 (843)
Q Consensus 783 ~--------~~~~~~~~~~~~~~dll~~~L~~dp~~R~sa~e~L~Hp~f~~~~~ 828 (843)
+ .+...++..++.+.|||++||++||++|+|++|+|+||||++...
T Consensus 352 ~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~t~~e~L~Hp~f~~~~~ 405 (458)
T 3rp9_A 352 RIFPKREGTDLAERFPASSADAIHLLKRMLVFNPNKRITINECLAHPFFKEVRI 405 (458)
T ss_dssp TTSCCCCCCCGGGGSTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTCC
T ss_pred HhcCCCCCCCHHHHCCCCCHHHHHHHHHHhccCccccCCHHHHhcCHhhhhcCC
Confidence 0 112234445666779999999999999999999999999987543
No 69
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=4.4e-41 Score=382.30 Aligned_cols=256 Identities=29% Similarity=0.453 Sum_probs=216.4
Q ss_pred HHHHcCCCCCCcccccCCeeEEEEEeCCCcEEEEEEeccCChhhHHHHHHHHHHHHhccCCcccceeeeeecCC-cEEEE
Q 003158 507 ALATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEG-EQMLV 585 (843)
Q Consensus 507 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~-~~~lV 585 (843)
.+..++|++.+.||+|+||.||+|.+. ++.||||+++... ..+.+.+|++++++++||||+++++++.+.+ ..++|
T Consensus 189 ~i~~~~~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv 265 (450)
T 1k9a_A 189 ALNMKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIV 265 (450)
T ss_dssp BCCGGGEEEEEEEEECSSEEEEEEEET-TEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEE
T ss_pred ccChHHeEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEE
Confidence 345578889999999999999999985 7899999998643 4467999999999999999999999986654 79999
Q ss_pred EecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCC
Q 003158 586 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVP 665 (843)
Q Consensus 586 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~ 665 (843)
|||+++|+|.+++.......+++..++.++.||++||+|||+++ |+||||||+|||+++++.+||+|||+++.....
T Consensus 266 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~ 342 (450)
T 1k9a_A 266 TEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVHRDLAARNVLVSEDNVAKVSDFGLTKEASST 342 (450)
T ss_dssp EECCTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECTTSCEEECCCTTCEECC--
T ss_pred EEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCCHhhEEECCCCCEEEeeCCCccccccc
Confidence 99999999999998776666889999999999999999999999 999999999999999999999999999854321
Q ss_pred CCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHh-CCCCCCCCcchHHHHHHHhhcccchhhccC
Q 003158 666 DIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDG 744 (843)
Q Consensus 666 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 744 (843)
.....+++.|+|||.+.+..++.++|||||||++|||++ |+.||....... ....+..+
T Consensus 343 ----------~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~----------~~~~i~~~ 402 (450)
T 1k9a_A 343 ----------QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD----------VVPRVEKG 402 (450)
T ss_dssp --------------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTT----------HHHHHHTT
T ss_pred ----------ccCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHH----------HHHHHHcC
Confidence 122357889999999999999999999999999999999 999997543211 11122233
Q ss_pred CCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhh
Q 003158 745 NMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNM 788 (843)
Q Consensus 745 ~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~ 788 (843)
.....|..+++.+.+++..||+.+|.+||++.++++.|+.+...
T Consensus 403 ~~~~~p~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i~~~ 446 (450)
T 1k9a_A 403 YKMDAPDGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHIRTH 446 (450)
T ss_dssp CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred CCCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHh
Confidence 34456777889999999999999999999999999999998653
No 70
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=5.6e-42 Score=377.03 Aligned_cols=203 Identities=23% Similarity=0.338 Sum_probs=176.3
Q ss_pred HcCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCC-----hhhHHHHHHHHHHHHhccCCcccceeeeeecCCcEE
Q 003158 510 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS-----LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQM 583 (843)
Q Consensus 510 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~ 583 (843)
.++|++.+.||+|+||+||+|... +++.||||++.... ....+.+.+|+++++.++||||+++++++.+.+..+
T Consensus 23 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~ 102 (351)
T 3c0i_A 23 EDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLY 102 (351)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred ccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence 467999999999999999999964 68999999986422 123567899999999999999999999999999999
Q ss_pred EEEecCCCCCHHHHHhhc--CCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCc---EEEeeccc
Q 003158 584 LVYEFMSNGTLRDQLSAK--SKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFT---AKVADFGL 658 (843)
Q Consensus 584 lV~e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~---~kl~DfGl 658 (843)
+||||+++|+|.+++... ....+++..++.++.||++||+|||+++ |+||||||+|||++.++. +||+|||+
T Consensus 103 lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~---ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~ 179 (351)
T 3c0i_A 103 MVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNN---IIHRDVKPHCVLLASKENSAPVKLGGFGV 179 (351)
T ss_dssp EEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECSSSTTCCEEECCCTT
T ss_pred EEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCChHHeEEecCCCCCcEEEecCcc
Confidence 999999999999888653 3345889999999999999999999999 999999999999987655 99999999
Q ss_pred cccCCCCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCC
Q 003158 659 SRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 722 (843)
Q Consensus 659 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~ 722 (843)
++...... .......||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 180 a~~~~~~~-------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~ 236 (351)
T 3c0i_A 180 AIQLGESG-------LVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGT 236 (351)
T ss_dssp CEECCTTS-------CBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSS
T ss_pred eeEecCCC-------eeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCc
Confidence 98764321 1123456999999999999999999999999999999999999999753
No 71
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=8.6e-42 Score=379.38 Aligned_cols=265 Identities=28% Similarity=0.454 Sum_probs=218.3
Q ss_pred HHHHHHcCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCCh-hhHHHHHHHHHHHHhccCCcccceeeeeecCCcE
Q 003158 505 EMALATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQ 582 (843)
Q Consensus 505 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~ 582 (843)
++....++|.+.+.||+|+||.||+|.+. +++.||||++..... ...+++.+|+++++.++||||+++++++.+.+..
T Consensus 108 ~~~~~~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~ 187 (377)
T 3cbl_A 108 KWVLNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPI 187 (377)
T ss_dssp TTBCCGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSC
T ss_pred ccEEchHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCc
Confidence 34445678899999999999999999976 789999999875432 2345788999999999999999999999999999
Q ss_pred EEEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccC
Q 003158 583 MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLA 662 (843)
Q Consensus 583 ~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~ 662 (843)
++||||+++|+|.++++... ..+++..++.++.||++||+|||+++ |+||||||+|||+++++.+||+|||+++..
T Consensus 188 ~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~LH~~~---ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~ 263 (377)
T 3cbl_A 188 YIVMELVQGGDFLTFLRTEG-ARLRVKTLLQMVGDAAAGMEYLESKC---CIHRDLAARNCLVTEKNVLKISDFGMSREE 263 (377)
T ss_dssp EEEEECCTTCBHHHHHHHHG-GGCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCGGGCEEC
T ss_pred EEEEEcCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCC---cCCcccCHHHEEEcCCCcEEECcCCCceec
Confidence 99999999999999997543 35888999999999999999999999 999999999999999999999999999864
Q ss_pred CCCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHh-CCCCCCCCcchHHHHHHHhhcccchhh
Q 003158 663 PVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSV 741 (843)
Q Consensus 663 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~ 741 (843)
..... ........+++.|+|||.+.+..++.++|||||||++|||++ |..||....... ... .+
T Consensus 264 ~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~~--~~~--------~~ 328 (377)
T 3cbl_A 264 ADGVY-----AASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQ--TRE--------FV 328 (377)
T ss_dssp TTSEE-----ECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHH--HHH--------HH
T ss_pred CCCce-----eecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH--HHH--------HH
Confidence 32110 001112235678999999999999999999999999999999 999997654321 111 11
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhh
Q 003158 742 IDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNM 788 (843)
Q Consensus 742 ~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~ 788 (843)
..+.....|..+++.+.+++.+||+.+|.+||++.++++.|+++.+.
T Consensus 329 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~~~ 375 (377)
T 3cbl_A 329 EKGGRLPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIRKR 375 (377)
T ss_dssp HTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HcCCCCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHhh
Confidence 22233445667788999999999999999999999999999998653
No 72
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=1.8e-41 Score=374.32 Aligned_cols=258 Identities=24% Similarity=0.376 Sum_probs=206.5
Q ss_pred HHcCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCC--hhhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEE
Q 003158 509 ATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLV 585 (843)
Q Consensus 509 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV 585 (843)
..++|++.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|+++++.++||||+++++++.+.+..++|
T Consensus 27 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv 106 (362)
T 2bdw_A 27 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLV 106 (362)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred cccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 3568999999999999999999965 68999999997543 23346789999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCC---cEEEeeccccccC
Q 003158 586 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKF---TAKVADFGLSRLA 662 (843)
Q Consensus 586 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~---~~kl~DfGla~~~ 662 (843)
|||+++|+|.+++... ..+++..+..++.||++||+|||+++ |+||||||+|||++.++ .+||+|||++...
T Consensus 107 ~e~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~ 181 (362)
T 2bdw_A 107 FDLVTGGELFEDIVAR--EFYSEADASHCIQQILESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEV 181 (362)
T ss_dssp ECCCCSCBHHHHHTTC--SCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCSGGGEEESCSSTTCCEEECCCTTCBCC
T ss_pred EecCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCchHHEEEecCCCCCCEEEeecCcceEe
Confidence 9999999999999654 35889999999999999999999999 99999999999998654 5999999999865
Q ss_pred CCCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhc
Q 003158 663 PVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVI 742 (843)
Q Consensus 663 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 742 (843)
.... ......||+.|+|||++.+..++.++|||||||++|||++|+.||...... ....
T Consensus 182 ~~~~--------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~-~~~~------------ 240 (362)
T 2bdw_A 182 NDSE--------AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH-RLYA------------ 240 (362)
T ss_dssp TTCC--------SCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHH------------
T ss_pred cCCc--------ccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHH-HHHH------------
Confidence 4321 123456999999999999999999999999999999999999999754321 1110
Q ss_pred cCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCCCCccCCCCCc
Q 003158 743 DGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPY 822 (843)
Q Consensus 743 ~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~sa~e~L~Hp~ 822 (843)
.+.......|. +. +....+.+.+|+.+||..||++|||++|+|+|||
T Consensus 241 -----------------~i~~~~~~~~~--~~--------------~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~ 287 (362)
T 2bdw_A 241 -----------------QIKAGAYDYPS--PE--------------WDTVTPEAKSLIDSMLTVNPKKRITADQALKVPW 287 (362)
T ss_dssp -----------------HHHHTCCCCCT--TG--------------GGGSCHHHHHHHHHHSCSSGGGSCCHHHHTTSHH
T ss_pred -----------------HHHhCCCCCCc--cc--------------ccCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcc
Confidence 00000000000 00 0011222346888899999999999999999999
Q ss_pred ccC
Q 003158 823 VSS 825 (843)
Q Consensus 823 f~~ 825 (843)
|+.
T Consensus 288 ~~~ 290 (362)
T 2bdw_A 288 ICN 290 (362)
T ss_dssp HHT
T ss_pred cCC
Confidence 965
No 73
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=9.3e-42 Score=388.13 Aligned_cols=264 Identities=30% Similarity=0.465 Sum_probs=216.3
Q ss_pred HHHHHHHcCCCCCCcccccCCeeEEEEEeCCCcEEEEEEeccCChhhHHHHHHHHHHHHhccCCcccceeeeeecCCcEE
Q 003158 504 GEMALATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQM 583 (843)
Q Consensus 504 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~ 583 (843)
+.+....++|++.+.||+|+||+||+|.+.++..||||+++... ...+++.+|+++|++++||||+++++++.+ +..+
T Consensus 177 ~~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~ 254 (452)
T 1fmk_A 177 DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIY 254 (452)
T ss_dssp TCSBCCGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCE
T ss_pred cccccChhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceE
Confidence 34455667899999999999999999999888889999998643 335689999999999999999999999976 6789
Q ss_pred EEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCC
Q 003158 584 LVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAP 663 (843)
Q Consensus 584 lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~ 663 (843)
+||||+++|+|.+++.......+++..++.++.||++||+|||+++ |+||||||+|||+++++.+||+|||+++...
T Consensus 255 iv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~---ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~ 331 (452)
T 1fmk_A 255 IVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIE 331 (452)
T ss_dssp EEECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEEECCCCTTC---
T ss_pred EEehhhcCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChhhEEECCCCCEEECCCccceecC
Confidence 9999999999999997654456889999999999999999999999 9999999999999999999999999998654
Q ss_pred CCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHh-CCCCCCCCcchHHHHHHHhhcccchhhc
Q 003158 664 VPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVI 742 (843)
Q Consensus 664 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 742 (843)
... ........+++.|+|||.+.+..++.++|||||||++|||++ |+.||...... +... .+.
T Consensus 332 ~~~------~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~-~~~~---------~i~ 395 (452)
T 1fmk_A 332 DNE------YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR-EVLD---------QVE 395 (452)
T ss_dssp -----------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHH-HHHH---------HHH
T ss_pred CCc------eecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHH-HHHH---------HHH
Confidence 321 111223456788999999999999999999999999999999 99999765432 1111 122
Q ss_pred cCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhh
Q 003158 743 DGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNM 788 (843)
Q Consensus 743 ~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~ 788 (843)
.+.....|..+++.+.+++.+||+.+|++||++.++++.|+.+...
T Consensus 396 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~~ 441 (452)
T 1fmk_A 396 RGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTS 441 (452)
T ss_dssp TTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSC
T ss_pred cCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhcc
Confidence 2333445667888999999999999999999999999999987654
No 74
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=1.9e-41 Score=374.21 Aligned_cols=270 Identities=25% Similarity=0.434 Sum_probs=221.5
Q ss_pred ccHHHHHHHHcCCCCCCcccccCCeeEEEEEe------CCCcEEEEEEeccCCh-hhHHHHHHHHHHHHhc-cCCcccce
Q 003158 501 FTYGEMALATNNFNSSTQIGQGGYGKVYKGIL------PDGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRL-HHRNLVSL 572 (843)
Q Consensus 501 ~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~nIv~l 572 (843)
+...++....++|++.+.||+|+||.||+|.+ .+++.||||++..... ...+.+.+|+++++++ +||||+++
T Consensus 12 ~~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~ 91 (359)
T 3vhe_A 12 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL 91 (359)
T ss_dssp CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred CCcccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeee
Confidence 45567777889999999999999999999984 2468999999986433 3356799999999999 79999999
Q ss_pred eeeeecCC-cEEEEEecCCCCCHHHHHhhcCC------------------------------------------------
Q 003158 573 VGYCDEEG-EQMLVYEFMSNGTLRDQLSAKSK------------------------------------------------ 603 (843)
Q Consensus 573 ~~~~~~~~-~~~lV~e~~~~gsL~~~l~~~~~------------------------------------------------ 603 (843)
++++.+.+ ..++||||+++|+|.++++....
T Consensus 92 ~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (359)
T 3vhe_A 92 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEK 171 (359)
T ss_dssp EEEECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC------------------------------------------
T ss_pred eeeeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCcccccccccccccc
Confidence 99997755 48999999999999999976432
Q ss_pred ----------------CCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCC
Q 003158 604 ----------------EPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 667 (843)
Q Consensus 604 ----------------~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~ 667 (843)
..+++..++.++.|+++||+|||+++ |+||||||+|||++.++.+||+|||+++......
T Consensus 172 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~~---ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~- 247 (359)
T 3vhe_A 172 SLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRDLAARNILLSEKNVVKICDFGLARDIYKDP- 247 (359)
T ss_dssp ------------CTTTTCBCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCT-
T ss_pred ccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHCC---cccCCCChhhEEEcCCCcEEEEeccceeeecccc-
Confidence 12889999999999999999999999 9999999999999999999999999998654322
Q ss_pred CCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHh-CCCCCCCCcchHHHHHHHhhcccchhhccCCC
Q 003158 668 EGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGNM 746 (843)
Q Consensus 668 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 746 (843)
.........||+.|+|||++.+..++.++|||||||++|||++ |+.||........... .+..+..
T Consensus 248 ----~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~---------~~~~~~~ 314 (359)
T 3vhe_A 248 ----DYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCR---------RLKEGTR 314 (359)
T ss_dssp ----TCEEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHH---------HHHHTCC
T ss_pred ----cchhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHHHHH---------HHHcCCC
Confidence 1223345568899999999999999999999999999999998 9999976543222111 1112223
Q ss_pred CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhh
Q 003158 747 GSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWN 787 (843)
Q Consensus 747 ~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~ 787 (843)
...+..+++++.+++..||+.+|.+||++.+++++|+.+.+
T Consensus 315 ~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~ 355 (359)
T 3vhe_A 315 MRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 355 (359)
T ss_dssp CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHH
Confidence 34455667889999999999999999999999999998765
No 75
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=1.6e-41 Score=369.03 Aligned_cols=204 Identities=27% Similarity=0.405 Sum_probs=174.7
Q ss_pred HcCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCChh-hHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEEe
Q 003158 510 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ-GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 587 (843)
Q Consensus 510 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e 587 (843)
.++|++.+.||+|+||+||+|... +++.||||++...... ..+.+.+|+.+++.++||||+++++++.+.+..++|||
T Consensus 6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e 85 (323)
T 3tki_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE 85 (323)
T ss_dssp TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEE
Confidence 368999999999999999999975 7899999998754332 34678899999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCC
Q 003158 588 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 667 (843)
Q Consensus 588 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~ 667 (843)
|+++|+|.+++... ..+++..++.++.||++||+|||+.+ |+||||||+|||++.++.+||+|||+++.......
T Consensus 86 ~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~aL~~LH~~g---ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 160 (323)
T 3tki_A 86 YCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR 160 (323)
T ss_dssp CCTTEEGGGGSBTT--TBCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCTTCEECEETTE
T ss_pred cCCCCcHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccccchHHEEEeCCCCEEEEEeeccceeccCCc
Confidence 99999999998643 35889999999999999999999999 99999999999999999999999999986542211
Q ss_pred CCcccceeeeeecccCCccCchhcccCCC-CchhhhHHHHHHHHHHHhCCCCCCCCc
Q 003158 668 EGIVPAHVSTVVKGTPGYLDPEYFLTHKL-TDKSDVYSLGVVFLELLTGMQPISHGK 723 (843)
Q Consensus 668 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwS~G~~l~elltg~~pf~~~~ 723 (843)
........||+.|+|||++.+..+ +.++|||||||++|||++|+.||....
T Consensus 161 -----~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~ 212 (323)
T 3tki_A 161 -----ERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPS 212 (323)
T ss_dssp -----ECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSC
T ss_pred -----ccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCc
Confidence 112234579999999999988775 778999999999999999999997544
No 76
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=2.6e-41 Score=374.55 Aligned_cols=261 Identities=27% Similarity=0.459 Sum_probs=204.6
Q ss_pred HcCCCCCCcccccCCeeEEEEEeC----CCcEEEEEEeccCC-hhhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEE
Q 003158 510 TNNFNSSTQIGQGGYGKVYKGILP----DGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQML 584 (843)
Q Consensus 510 ~~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~l 584 (843)
.++|++.+.||+|+||.||+|+.. ++..||||+++... ....+++.+|++++++++||||+++++++.+.+..++
T Consensus 44 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 123 (373)
T 2qol_A 44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMI 123 (373)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEE
T ss_pred HhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEE
Confidence 457999999999999999999864 57789999997643 3345689999999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCC
Q 003158 585 VYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPV 664 (843)
Q Consensus 585 V~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~ 664 (843)
||||+++|+|.++++.. ...+++..++.++.||++||+|||+++ |+||||||+|||++.++.+||+|||+++....
T Consensus 124 v~e~~~~~sL~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 199 (373)
T 2qol_A 124 VTEYMENGSLDSFLRKH-DAQFTVIQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLGRVLED 199 (373)
T ss_dssp EEECCTTCBHHHHHHTT-TTCSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCEEECCC--------
T ss_pred EEeCCCCCcHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHCC---eeCCCCCcceEEEcCCCCEEECcCcccccccc
Confidence 99999999999999754 345899999999999999999999999 99999999999999999999999999987643
Q ss_pred CCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHh-CCCCCCCCcchHHHHHHHhhcccchhhcc
Q 003158 665 PDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVID 743 (843)
Q Consensus 665 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 743 (843)
.... ........+++.|+|||++.+..++.++|||||||++|||++ |+.||...... +... .+..
T Consensus 200 ~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~-~~~~---------~i~~ 265 (373)
T 2qol_A 200 DPEA----AYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ-DVIK---------AVDE 265 (373)
T ss_dssp ------------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHH-HHHH---------HHHT
T ss_pred CCcc----ceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHH-HHHH---------HHHc
Confidence 2110 111122345788999999999999999999999999999998 99999765431 1111 1111
Q ss_pred CCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhh
Q 003158 744 GNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNM 788 (843)
Q Consensus 744 ~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~ 788 (843)
+.....+..++..+.+++..||+.+|.+||++.++++.|+.+...
T Consensus 266 ~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~~~ 310 (373)
T 2qol_A 266 GYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 310 (373)
T ss_dssp TEECCCCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred CCCCCCCccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHHHhC
Confidence 222334556778899999999999999999999999999998653
No 77
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=7.1e-42 Score=372.10 Aligned_cols=287 Identities=22% Similarity=0.384 Sum_probs=206.9
Q ss_pred cCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCChhh-HHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEEec
Q 003158 511 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQG-EKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 588 (843)
Q Consensus 511 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e~ 588 (843)
++|.+.+.||+|+||+||+|... +++.||+|++....... ...+.+|+++++.++||||+++++++.+.+..++||||
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY 81 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecc
Confidence 57889999999999999999975 78999999987533222 12456799999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCCC
Q 003158 589 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 668 (843)
Q Consensus 589 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 668 (843)
++ |+|.+++.... ..+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++.....
T Consensus 82 ~~-~~l~~~~~~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~--- 153 (324)
T 3mtl_A 82 LD-KDLKQYLDDCG-NIINMHNVKLFLFQLLRGLAYCHRQK---VLHRDLKPQNLLINERGELKLADFGLARAKSIP--- 153 (324)
T ss_dssp CS-EEHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHTT---EEESSCCGGGEEECTTCCEEECSSSEEECC------
T ss_pred cc-cCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCcCHHHEEECCCCCEEEccCcccccccCC---
Confidence 96 69999987643 45889999999999999999999999 999999999999999999999999999865422
Q ss_pred CcccceeeeeecccCCccCchhccc-CCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhccCCC-
Q 003158 669 GIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNM- 746 (843)
Q Consensus 669 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~- 746 (843)
........||+.|+|||++.+ ..++.++|||||||++|||++|+.||...... +...... .......
T Consensus 154 ----~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~-~~~~~i~------~~~~~~~~ 222 (324)
T 3mtl_A 154 ----TKTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVE-EQLHFIF------RILGTPTE 222 (324)
T ss_dssp -------------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHH------HHHCCCCT
T ss_pred ----ccccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHH------HHhCCCCh
Confidence 122234568999999999987 56899999999999999999999999765432 2111111 0000000
Q ss_pred CCCCHHHH-HHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCCCCccCCCCCcccC
Q 003158 747 GSYPSECV-EKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSS 825 (843)
Q Consensus 747 ~~~~~~~~-~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~sa~e~L~Hp~f~~ 825 (843)
...+.... ..+.. ...|..+... .....+..++.+.+|+.+||++||++|||++|+|+||||.+
T Consensus 223 ~~~~~~~~~~~~~~------~~~~~~~~~~---------~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~ 287 (324)
T 3mtl_A 223 ETWPGILSNEEFKT------YNYPKYRAEA---------LLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPFFLS 287 (324)
T ss_dssp TTSTTGGGCHHHHH------TCCCCCCCCC---------HHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGGG
T ss_pred Hhchhhhcchhhcc------cccccccchh---------hhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcChhhhh
Confidence 00010000 00000 0011111110 11122334455678999999999999999999999999987
Q ss_pred CCCCCc
Q 003158 826 DVSGSN 831 (843)
Q Consensus 826 ~~~~~~ 831 (843)
......
T Consensus 288 ~~~~~~ 293 (324)
T 3mtl_A 288 LGERIH 293 (324)
T ss_dssp GCSTTS
T ss_pred cccccc
Confidence 655433
No 78
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=2.8e-41 Score=370.39 Aligned_cols=264 Identities=29% Similarity=0.486 Sum_probs=218.4
Q ss_pred HHHcCCCCCCcccccCCeeEEEEEeC------CCcEEEEEEeccCCh-hhHHHHHHHHHHHHhccCCcccceeeeeecCC
Q 003158 508 LATNNFNSSTQIGQGGYGKVYKGILP------DGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEG 580 (843)
Q Consensus 508 ~~~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~ 580 (843)
...++|++.+.||+|+||.||+|... +++.||||+++.... ...+.+.+|+++++.++||||+++++++.+.+
T Consensus 44 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~ 123 (343)
T 1luf_A 44 YPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGK 123 (343)
T ss_dssp CCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSS
T ss_pred ecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCC
Confidence 34678999999999999999999974 348999999986433 33567999999999999999999999999999
Q ss_pred cEEEEEecCCCCCHHHHHhhcC----------------------CCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccC
Q 003158 581 EQMLVYEFMSNGTLRDQLSAKS----------------------KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDI 638 (843)
Q Consensus 581 ~~~lV~e~~~~gsL~~~l~~~~----------------------~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dl 638 (843)
..++||||+++|+|.+++.... ...+++..++.++.||++||.|||+++ |+||||
T Consensus 124 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~---ivH~Dl 200 (343)
T 1luf_A 124 PMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERK---FVHRDL 200 (343)
T ss_dssp SCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCC
T ss_pred ceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCC
Confidence 9999999999999999997642 156899999999999999999999999 999999
Q ss_pred CCCcEEEcCCCcEEEeeccccccCCCCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHh-CCC
Q 003158 639 KASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQ 717 (843)
Q Consensus 639 kp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~ellt-g~~ 717 (843)
||+||+++.++.+||+|||+++....... ........+|+.|+|||++.+..++.++|||||||++|||++ |..
T Consensus 201 kp~NIl~~~~~~~kl~Dfg~~~~~~~~~~-----~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~ 275 (343)
T 1luf_A 201 ATRNCLVGENMVVKIADFGLSRNIYSADY-----YKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQ 275 (343)
T ss_dssp SGGGEEECGGGCEEECCCSCHHHHTGGGC-----BC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCC
T ss_pred CcceEEECCCCeEEEeecCCCcccccCcc-----ccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCC
Confidence 99999999999999999999976532211 112234567889999999999999999999999999999999 999
Q ss_pred CCCCCcchHHHHHHHhhcccchhhccCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhC
Q 003158 718 PISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMM 789 (843)
Q Consensus 718 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~ 789 (843)
||...... +.. ..+..+.....+..++..+.+++..||+.+|.+||++.++++.|+++....
T Consensus 276 p~~~~~~~-~~~---------~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~~~ 337 (343)
T 1luf_A 276 PYYGMAHE-EVI---------YYVRDGNILACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCERA 337 (343)
T ss_dssp TTTTSCHH-HHH---------HHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC--
T ss_pred cCCCCChH-HHH---------HHHhCCCcCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHHhhh
Confidence 99765431 111 122333344556677889999999999999999999999999999986544
No 79
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=1.8e-41 Score=372.55 Aligned_cols=259 Identities=25% Similarity=0.369 Sum_probs=195.0
Q ss_pred HcCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCChhhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEEec
Q 003158 510 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 588 (843)
Q Consensus 510 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e~ 588 (843)
.++|++.+.||+|+||+||+|... +++.||||++.... ..+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus 52 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 129 (349)
T 2w4o_A 52 SDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLEL 129 (349)
T ss_dssp GGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred cCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch--hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEEe
Confidence 467999999999999999999976 58899999998532 345788999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcC---CCcEEEeeccccccCCCC
Q 003158 589 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDH---KFTAKVADFGLSRLAPVP 665 (843)
Q Consensus 589 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~---~~~~kl~DfGla~~~~~~ 665 (843)
+++|+|.+++... ..+++..++.++.|+++||.|||+.+ |+||||||+||+++. ++.+||+|||+++.....
T Consensus 130 ~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~ 204 (349)
T 2w4o_A 130 VTGGELFDRIVEK--GYYSERDAADAVKQILEAVAYLHENG---IVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQ 204 (349)
T ss_dssp CCSCBHHHHHTTC--SSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEESSSSTTCCEEECCCC--------
T ss_pred CCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCcccEEEecCCCCCCEEEccCccccccCcc
Confidence 9999999999654 35889999999999999999999999 999999999999975 889999999999865421
Q ss_pred CCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhccCC
Q 003158 666 DIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGN 745 (843)
Q Consensus 666 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 745 (843)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||............
T Consensus 205 --------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~-------------- 262 (349)
T 2w4o_A 205 --------VLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRR-------------- 262 (349)
T ss_dssp ----------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHHHHHH--------------
T ss_pred --------cccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHHHHHH--------------
Confidence 1223456899999999999999999999999999999999999999755432211111
Q ss_pred CCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCCCCccCCCCCcccC
Q 003158 746 MGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSS 825 (843)
Q Consensus 746 ~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~sa~e~L~Hp~f~~ 825 (843)
+..+-...+. | ..+.....+.+|+.+||..||++|||++|+|+||||.+
T Consensus 263 ---------------i~~~~~~~~~--~--------------~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~ 311 (349)
T 2w4o_A 263 ---------------ILNCEYYFIS--P--------------WWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQHPWVTG 311 (349)
T ss_dssp ---------------HHTTCCCCCT--T--------------TTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSTTTTS
T ss_pred ---------------HHhCCCccCC--c--------------hhhhCCHHHHHHHHHHccCChhhCcCHHHHhcCcccCC
Confidence 1111000000 0 00112223447899999999999999999999999987
Q ss_pred CCC
Q 003158 826 DVS 828 (843)
Q Consensus 826 ~~~ 828 (843)
...
T Consensus 312 ~~~ 314 (349)
T 2w4o_A 312 KAA 314 (349)
T ss_dssp TTC
T ss_pred Ccc
Confidence 654
No 80
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=2e-41 Score=367.11 Aligned_cols=283 Identities=20% Similarity=0.305 Sum_probs=204.2
Q ss_pred HcCCCCC-CcccccCCeeEEEEEe-CCCcEEEEEEeccCChhhHHHHHHHHHHHHhc-cCCcccceeeeeecCCcEEEEE
Q 003158 510 TNNFNSS-TQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQMLVY 586 (843)
Q Consensus 510 ~~~~~~~-~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~lV~ 586 (843)
.++|++. +.||+|+||+||+|.. .+++.||||++........+.+.+|++++.++ +||||+++++++.+.+..++||
T Consensus 11 ~~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~ 90 (316)
T 2ac3_A 11 EDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVF 90 (316)
T ss_dssp TTSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred ceeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEE
Confidence 3567774 7899999999999995 47999999999876555567899999999985 7999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCc---EEEeeccccccCC
Q 003158 587 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFT---AKVADFGLSRLAP 663 (843)
Q Consensus 587 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~---~kl~DfGla~~~~ 663 (843)
||+++|+|.+++.... .+++..++.++.||++||+|||+++ |+||||||+||+++.++. +||+|||++....
T Consensus 91 e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~ 165 (316)
T 2ac3_A 91 EKMRGGSILSHIHKRR--HFNELEASVVVQDVASALDFLHNKG---IAHRDLKPENILCEHPNQVSPVKICDFDLGSGIK 165 (316)
T ss_dssp ECCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEESCSSSSCSEEECCTTCCC---
T ss_pred EcCCCCcHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHhCC---ceeCCCCHHHEEEccCCCcCceEEEEccCccccc
Confidence 9999999999997653 5889999999999999999999999 999999999999998776 9999999997654
Q ss_pred CCCCCCcccceeeeeecccCCccCchhccc-----CCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccc
Q 003158 664 VPDIEGIVPAHVSTVVKGTPGYLDPEYFLT-----HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMM 738 (843)
Q Consensus 664 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~ 738 (843)
.................||+.|+|||++.+ ..++.++|||||||++|||++|+.||....... ..
T Consensus 166 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~----------~~ 235 (316)
T 2ac3_A 166 LNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSD----------CG 235 (316)
T ss_dssp ----------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSC----------SC
T ss_pred cCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCccccccc----------cc
Confidence 322111111112234569999999999975 557889999999999999999999997543210 00
Q ss_pred hhhccCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCCCCccCC
Q 003158 739 FSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSML 818 (843)
Q Consensus 739 ~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~sa~e~L 818 (843)
+ ............+.+.+..... .-|. . ..+.....+.+|+.+||..||++|||++|+|
T Consensus 236 ~-----~~~~~~~~~~~~~~~~i~~~~~----~~~~-~-----------~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l 294 (316)
T 2ac3_A 236 W-----DRGEACPACQNMLFESIQEGKY----EFPD-K-----------DWAHISCAAKDLISKLLVRDAKQRLSAAQVL 294 (316)
T ss_dssp C---------CCHHHHHHHHHHHHHCCC----CCCH-H-----------HHTTSCHHHHHHHHHHSCSSTTTSCCHHHHH
T ss_pred c-----cccccchhHHHHHHHHHhccCc----ccCc-h-----------hcccCCHHHHHHHHHHhhCChhhCCCHHHHh
Confidence 0 0000111112222222221111 0110 0 0012233445799999999999999999999
Q ss_pred CCCcccCCCC
Q 003158 819 KHPYVSSDVS 828 (843)
Q Consensus 819 ~Hp~f~~~~~ 828 (843)
+||||++...
T Consensus 295 ~hp~~~~~~~ 304 (316)
T 2ac3_A 295 QHPWVQGCAP 304 (316)
T ss_dssp HSTTCC----
T ss_pred cChhhcCCCC
Confidence 9999987543
No 81
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=3e-41 Score=362.70 Aligned_cols=254 Identities=26% Similarity=0.390 Sum_probs=196.8
Q ss_pred HcCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCChh--------------------------hHHHHHHHHHHHH
Q 003158 510 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ--------------------------GEKEFLTEIQFLS 562 (843)
Q Consensus 510 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--------------------------~~~~~~~E~~~l~ 562 (843)
.++|++.+.||+|+||.||+|... +++.||||++...... ..+++.+|+++++
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 91 (298)
T 2zv2_A 12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK 91 (298)
T ss_dssp ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence 367999999999999999999964 6899999998754321 1246889999999
Q ss_pred hccCCcccceeeeeec--CCcEEEEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCC
Q 003158 563 RLHHRNLVSLVGYCDE--EGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKA 640 (843)
Q Consensus 563 ~l~h~nIv~l~~~~~~--~~~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp 640 (843)
.++||||+++++++.+ .+..++||||+++++|.+++. ..++++..++.++.||++||+|||+++ |+||||||
T Consensus 92 ~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp 165 (298)
T 2zv2_A 92 KLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPT---LKPLSEDQARFYFQDLIKGIEYLHYQK---IIHRDIKP 165 (298)
T ss_dssp TCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSC---SSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCG
T ss_pred hCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCH
Confidence 9999999999999976 568899999999999988653 346899999999999999999999999 99999999
Q ss_pred CcEEEcCCCcEEEeeccccccCCCCCCCCcccceeeeeecccCCccCchhcccCC---CCchhhhHHHHHHHHHHHhCCC
Q 003158 641 SNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHK---LTDKSDVYSLGVVFLELLTGMQ 717 (843)
Q Consensus 641 ~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~~sDvwS~G~~l~elltg~~ 717 (843)
+||+++.++.+||+|||+++...... .......||+.|+|||++.+.. ++.++|||||||++|||++|+.
T Consensus 166 ~Nil~~~~~~~kl~Dfg~~~~~~~~~-------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~ 238 (298)
T 2zv2_A 166 SNLLVGEDGHIKIADFGVSNEFKGSD-------ALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQC 238 (298)
T ss_dssp GGEEECTTSCEEECCCTTCEECSSSS-------CEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSC
T ss_pred HHEEECCCCCEEEecCCCcccccccc-------ccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCC
Confidence 99999999999999999998654321 1233457999999999998765 3778999999999999999999
Q ss_pred CCCCCcchHHHHHHHhhcccchhhccCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCC
Q 003158 718 PISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTP 797 (843)
Q Consensus 718 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~ 797 (843)
||....... .. ..+.......|. . +...+...
T Consensus 239 pf~~~~~~~-~~-----------------------------~~~~~~~~~~~~-~-----------------~~~~~~l~ 270 (298)
T 2zv2_A 239 PFMDERIMC-LH-----------------------------SKIKSQALEFPD-Q-----------------PDIAEDLK 270 (298)
T ss_dssp SSCCSSHHH-HH-----------------------------HHHHHCCCCCCS-S-----------------SCCCHHHH
T ss_pred CCCCccHHH-HH-----------------------------HHHhcccCCCCC-c-----------------cccCHHHH
Confidence 997543211 00 000000000010 0 11122234
Q ss_pred ccccCCCCCCCCCCCCCccCCCCCccc
Q 003158 798 EFINSEHTSKEETPPSSSSMLKHPYVS 824 (843)
Q Consensus 798 dll~~~L~~dp~~R~sa~e~L~Hp~f~ 824 (843)
+++.+||..||++|||++|+++||||+
T Consensus 271 ~li~~~l~~dp~~R~s~~e~l~hp~~~ 297 (298)
T 2zv2_A 271 DLITRMLDKNPESRIVVPEIKLHPWVT 297 (298)
T ss_dssp HHHHHHTCSCTTTSCCHHHHTTCHHHH
T ss_pred HHHHHHhhcChhhCCCHHHHhcCcccc
Confidence 678888999999999999999999996
No 82
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=8.5e-41 Score=372.16 Aligned_cols=265 Identities=26% Similarity=0.455 Sum_probs=220.0
Q ss_pred HHcCCCCCCcccccCCeeEEEEEeC--------CCcEEEEEEeccCCh-hhHHHHHHHHHHHHhc-cCCcccceeeeeec
Q 003158 509 ATNNFNSSTQIGQGGYGKVYKGILP--------DGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRL-HHRNLVSLVGYCDE 578 (843)
Q Consensus 509 ~~~~~~~~~~lg~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~ 578 (843)
..++|.+.+.||+|+||+||+|... ++..||||++..... ...+++.+|+++++.+ +||||+++++++.+
T Consensus 67 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~ 146 (382)
T 3tt0_A 67 PRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQ 146 (382)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred chhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeecc
Confidence 4568889999999999999999852 246899999976433 3357789999999999 99999999999999
Q ss_pred CCcEEEEEecCCCCCHHHHHhhcCC--------------CCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEE
Q 003158 579 EGEQMLVYEFMSNGTLRDQLSAKSK--------------EPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNIL 644 (843)
Q Consensus 579 ~~~~~lV~e~~~~gsL~~~l~~~~~--------------~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NIL 644 (843)
.+..++||||+++|+|.+++..... ..+++..++.++.||++||+|||+.+ |+||||||+|||
T Consensus 147 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIl 223 (382)
T 3tt0_A 147 DGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK---CIHRDLAARNVL 223 (382)
T ss_dssp SSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEE
T ss_pred CCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCcceEE
Confidence 9999999999999999999976542 45899999999999999999999999 999999999999
Q ss_pred EcCCCcEEEeeccccccCCCCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHh-CCCCCCCCc
Q 003158 645 LDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGK 723 (843)
Q Consensus 645 l~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~ellt-g~~pf~~~~ 723 (843)
+++++.+||+|||+++........ .......+|+.|+|||++.+..++.++|||||||++|||++ |..||....
T Consensus 224 l~~~~~~kL~DFG~a~~~~~~~~~-----~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~ 298 (382)
T 3tt0_A 224 VTEDNVMKIADFGLARDIHHIDYY-----KKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP 298 (382)
T ss_dssp ECTTCCEEECSCSCCCCSSCCCTT-----CCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC
T ss_pred EcCCCcEEEcccCccccccccccc-----ccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCC
Confidence 999999999999999876533211 12233457889999999999999999999999999999999 999997544
Q ss_pred chHHHHHHHhhcccchhhccCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCC
Q 003158 724 NIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPE 791 (843)
Q Consensus 724 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~ 791 (843)
. .+... .+..+.....+..++.++.+++..||+.+|.+||++.++++.|+++......
T Consensus 299 ~-~~~~~---------~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~~ 356 (382)
T 3tt0_A 299 V-EELFK---------LLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALTSN 356 (382)
T ss_dssp H-HHHHH---------HHHTTCCCCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHSCS
T ss_pred H-HHHHH---------HHHcCCCCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHHhc
Confidence 2 11111 1222223344566778899999999999999999999999999999775543
No 83
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=3.7e-41 Score=366.36 Aligned_cols=259 Identities=20% Similarity=0.291 Sum_probs=184.1
Q ss_pred CCcccccCCeeEEEEEeC-CCcEEEEEEeccCChhhHHHHHHHHHHHHhcc-CCcccceeeeeecCCcEEEEEecCCCCC
Q 003158 516 STQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLH-HRNLVSLVGYCDEEGEQMLVYEFMSNGT 593 (843)
Q Consensus 516 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~nIv~l~~~~~~~~~~~lV~e~~~~gs 593 (843)
.+.||+|+||+||+|... +++.||||++... ....+.+|+++++.+. ||||+++++++.+++..++||||+++|+
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~ 92 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR---MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGE 92 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG---GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCB
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEEChh---hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCc
Confidence 378999999999999975 6899999999642 3457788999999997 9999999999999999999999999999
Q ss_pred HHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCC---cEEEeeccccccCCCCCCCCc
Q 003158 594 LRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKF---TAKVADFGLSRLAPVPDIEGI 670 (843)
Q Consensus 594 L~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~---~~kl~DfGla~~~~~~~~~~~ 670 (843)
|.+++... ..+++..++.++.|+++||+|||+++ |+||||||+|||++.++ .+||+|||+++......
T Consensus 93 L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~---- 163 (325)
T 3kn6_A 93 LFERIKKK--KHFSETEASYIMRKLVSAVSHMHDVG---VVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDN---- 163 (325)
T ss_dssp HHHHHHHC--SCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEEEC----CEEEECCCTTCEECCC------
T ss_pred HHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC---CeecCCCHHHEEEecCCCcccEEEeccccceecCCCC----
Confidence 99999764 35899999999999999999999999 99999999999998766 89999999998654321
Q ss_pred ccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhccCCCCCCC
Q 003158 671 VPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYP 750 (843)
Q Consensus 671 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 750 (843)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||........ . ..
T Consensus 164 ---~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~-------~-------------~~ 220 (325)
T 3kn6_A 164 ---QPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLT-------C-------------TS 220 (325)
T ss_dssp -----------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC--------------C-------------CC
T ss_pred ---CcccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccc-------c-------------cc
Confidence 222345689999999999999999999999999999999999999975332100 0 00
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCCCCccCCCCCcccCCCC
Q 003158 751 SECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSSDVS 828 (843)
Q Consensus 751 ~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~sa~e~L~Hp~f~~~~~ 828 (843)
..+++...........+ .. ++..++.+.+|+.+||..||++|||++|+++||||.....
T Consensus 221 ------~~~~~~~i~~~~~~~~~--~~-----------~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h~w~~~~~~ 279 (325)
T 3kn6_A 221 ------AVEIMKKIKKGDFSFEG--EA-----------WKNVSQEAKDLIQGLLTVDPNKRLKMSGLRYNEWLQDGSQ 279 (325)
T ss_dssp ------HHHHHHHHTTTCCCCCS--HH-----------HHTSCHHHHHHHHHHHCCCTTTCCCTTTSTTCGGGCTTCC
T ss_pred ------HHHHHHHHHcCCCCCCc--cc-----------ccCCCHHHHHHHHHHCCCChhHCCCHHHHhcChhhccCcc
Confidence 00011111111110000 00 0011233457888999999999999999999999987544
No 84
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=3.3e-41 Score=364.93 Aligned_cols=262 Identities=29% Similarity=0.467 Sum_probs=217.7
Q ss_pred HHHcCCCCCCcccccCCeeEEEEEe------CCCcEEEEEEeccCC-hhhHHHHHHHHHHHHhccCCcccceeeeeecCC
Q 003158 508 LATNNFNSSTQIGQGGYGKVYKGIL------PDGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEG 580 (843)
Q Consensus 508 ~~~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~ 580 (843)
...++|.+.+.||+|+||.||+|.. .+++.||||++.... ....+++.+|+++++.++||||+++++++.+.+
T Consensus 20 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~ 99 (314)
T 2ivs_A 20 FPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDG 99 (314)
T ss_dssp CCGGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSS
T ss_pred cchhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCC
Confidence 3467899999999999999999985 245899999997543 334577899999999999999999999999999
Q ss_pred cEEEEEecCCCCCHHHHHhhcCC----------------------CCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccC
Q 003158 581 EQMLVYEFMSNGTLRDQLSAKSK----------------------EPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDI 638 (843)
Q Consensus 581 ~~~lV~e~~~~gsL~~~l~~~~~----------------------~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dl 638 (843)
..++||||+++|+|.+++..... ..+++..++.++.||++||+|||+++ |+||||
T Consensus 100 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~di 176 (314)
T 2ivs_A 100 PLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMK---LVHRDL 176 (314)
T ss_dssp SCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHTT---EECCCC
T ss_pred ceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHCC---Cccccc
Confidence 99999999999999999976432 34889999999999999999999999 999999
Q ss_pred CCCcEEEcCCCcEEEeeccccccCCCCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHh-CCC
Q 003158 639 KASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQ 717 (843)
Q Consensus 639 kp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~ellt-g~~ 717 (843)
||+||++++++.+||+|||+++....... ........+++.|+|||.+.+..++.++|||||||++|||++ |+.
T Consensus 177 kp~NIli~~~~~~kl~Dfg~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~ 251 (314)
T 2ivs_A 177 AARNILVAEGRKMKISDFGLSRDVYEEDS-----YVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGN 251 (314)
T ss_dssp SGGGEEEETTTEEEECCCTTCEECTTTSC-----EECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCC
T ss_pred chheEEEcCCCCEEEcccccccccccccc-----ceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCC
Confidence 99999999999999999999986643221 111233457788999999999999999999999999999999 999
Q ss_pred CCCCCcchHHHHHHHhhcccchhhccCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhh
Q 003158 718 PISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWN 787 (843)
Q Consensus 718 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~ 787 (843)
||........ . ..+..+.....+..+++.+.+++.+||+.+|.+||++.++++.|+++..
T Consensus 252 p~~~~~~~~~-~---------~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~~ 311 (314)
T 2ivs_A 252 PYPGIPPERL-F---------NLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMV 311 (314)
T ss_dssp SSTTCCGGGH-H---------HHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCCCCCHHHH-H---------HHhhcCCcCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 9975543111 1 1112222334556677889999999999999999999999999998865
No 85
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=1.6e-41 Score=361.74 Aligned_cols=263 Identities=25% Similarity=0.428 Sum_probs=216.1
Q ss_pred HHHHHHcCCCCCCcccccCCeeEEEEEeCCCcEEEEEEeccCChhhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEE
Q 003158 505 EMALATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQML 584 (843)
Q Consensus 505 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~l 584 (843)
.+....++|++.+.||+|+||+||+|.+.++..||+|++..... ..+++.+|+++++.++||||+++++++.+.+..++
T Consensus 18 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~l 96 (283)
T 3gen_A 18 SWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFI 96 (283)
T ss_dssp TTBCCGGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEE
T ss_pred CccCCHHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCC-CHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEE
Confidence 33445678999999999999999999998888999999986432 34678999999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCC
Q 003158 585 VYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPV 664 (843)
Q Consensus 585 V~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~ 664 (843)
||||+++++|.+++.... ..+++..++.++.|+++||+|||+++ |+||||||+||+++.++.+||+|||+++....
T Consensus 97 v~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~ 172 (283)
T 3gen_A 97 ITEYMANGCLLNYLREMR-HRFQTQQLLEMCKDVCEAMEYLESKQ---FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLD 172 (283)
T ss_dssp EECCCTTCBHHHHHHCGG-GCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCSGGGEEECTTSCEEECSTTGGGGBCC
T ss_pred EEeccCCCcHHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCCccceEEEcCCCCEEEccccccccccc
Confidence 999999999999997632 35889999999999999999999999 99999999999999999999999999986542
Q ss_pred CCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHh-CCCCCCCCcchHHHHHHHhhcccchhhcc
Q 003158 665 PDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVID 743 (843)
Q Consensus 665 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 743 (843)
.. ........+|+.|+|||.+.+..++.++|||||||++|||++ |+.||........ .. .+..
T Consensus 173 ~~------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~~-~~---------~~~~ 236 (283)
T 3gen_A 173 DE------YTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSET-AE---------HIAQ 236 (283)
T ss_dssp HH------HHSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHH-HH---------HHHT
T ss_pred cc------cccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChhHH-HH---------HHhc
Confidence 21 111123346778999999999999999999999999999998 9999976543211 11 1122
Q ss_pred CCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhh
Q 003158 744 GNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNM 788 (843)
Q Consensus 744 ~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~ 788 (843)
+.....+..+++.+.+++..||+.+|.+||++.++++.|+++.+.
T Consensus 237 ~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~~~~ 281 (283)
T 3gen_A 237 GLRLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILDVMDE 281 (283)
T ss_dssp TCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred ccCCCCCCcCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHhhc
Confidence 222334555567899999999999999999999999999988653
No 86
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=4.9e-42 Score=374.23 Aligned_cols=285 Identities=22% Similarity=0.344 Sum_probs=203.1
Q ss_pred HcCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCChhh--HHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEE
Q 003158 510 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQG--EKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 586 (843)
Q Consensus 510 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~ 586 (843)
.++|++.+.||+|+||+||+|... +++.||||++....... .+.+.+|+++++.++||||+++++++.+.+..++||
T Consensus 33 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 112 (329)
T 3gbz_A 33 IDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLIF 112 (329)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEEEE
Confidence 468999999999999999999954 78999999997543322 456789999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEE-----cCCCcEEEeecccccc
Q 003158 587 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILL-----DHKFTAKVADFGLSRL 661 (843)
Q Consensus 587 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl-----~~~~~~kl~DfGla~~ 661 (843)
||++ |+|.+++.... .+++..++.++.||++||+|||+++ |+||||||+|||+ +.++.+||+|||+++.
T Consensus 113 e~~~-~~L~~~~~~~~--~~~~~~~~~i~~ql~~~l~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~ 186 (329)
T 3gbz_A 113 EYAE-NDLKKYMDKNP--DVSMRVIKSFLYQLINGVNFCHSRR---CLHRDLKPQNLLLSVSDASETPVLKIGDFGLARA 186 (329)
T ss_dssp ECCS-EEHHHHHHHCT--TCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEEC-----CCEEEECCTTHHHH
T ss_pred ecCC-CCHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHhCC---EECCCCCHHHEEEecCCCCccceEEECcCCCccc
Confidence 9997 59999997654 4889999999999999999999999 9999999999999 4555699999999986
Q ss_pred CCCCCCCCcccceeeeeecccCCccCchhcccC-CCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchh
Q 003158 662 APVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTH-KLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFS 740 (843)
Q Consensus 662 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~ 740 (843)
.... ........||+.|+|||++.+. .++.++|||||||++|||++|+.||........ .........
T Consensus 187 ~~~~-------~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~-~~~~~~~~~--- 255 (329)
T 3gbz_A 187 FGIP-------IRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQ-LFKIFEVLG--- 255 (329)
T ss_dssp HC------------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHHHHHHHC---
T ss_pred cCCc-------ccccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHH-HHHHHHHhC---
Confidence 5422 1222345689999999999874 489999999999999999999999976543222 111111000
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHhcccCCCCC-CCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCCCCccCCC
Q 003158 741 VIDGNMGSYPSECVEKFIKLALKCCQDETDAR-PSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLK 819 (843)
Q Consensus 741 ~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~R-Ps~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~sa~e~L~ 819 (843)
.+.....+. ... ........|..+ ......+. ...+..+.+|+.+||+.||++|||++|+|+
T Consensus 256 --~~~~~~~~~-----~~~-~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 318 (329)
T 3gbz_A 256 --LPDDTTWPG-----VTA-LPDWKQSFPKFRGKTLKRVLG---------ALLDDEGLDLLTAMLEMDPVKRISAKNALE 318 (329)
T ss_dssp --CCCTTTSTT-----GGG-STTCCTTCCCCCCCCHHHHHG---------GGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred --CCchhhhhh-----hhh-hhhhhhhhhhhccccHhhhcc---------cccCHHHHHHHHHHccCChhhCCCHHHHhC
Confidence 000000000 000 000001111111 12221110 012334568999999999999999999999
Q ss_pred CCcccCCCC
Q 003158 820 HPYVSSDVS 828 (843)
Q Consensus 820 Hp~f~~~~~ 828 (843)
||||++..+
T Consensus 319 hp~f~~~~~ 327 (329)
T 3gbz_A 319 HPYFSHNDF 327 (329)
T ss_dssp SGGGSSSCS
T ss_pred CcccCCCCC
Confidence 999998765
No 87
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=4.7e-41 Score=386.45 Aligned_cols=262 Identities=30% Similarity=0.465 Sum_probs=220.4
Q ss_pred HHHHHHcCCCCCCcccccCCeeEEEEEeCC-CcEEEEEEeccCChhhHHHHHHHHHHHHhccCCcccceeeeeecCCcEE
Q 003158 505 EMALATNNFNSSTQIGQGGYGKVYKGILPD-GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQM 583 (843)
Q Consensus 505 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~ 583 (843)
++....++|++.+.||+|+||.||+|.+.. +..||||+++... ...+++.+|+++|++++||||++++++|.+.+..+
T Consensus 214 ~~~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~ 292 (495)
T 1opk_A 214 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFY 292 (495)
T ss_dssp CCBCCGGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE
T ss_pred ccccCHHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcc-cchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEE
Confidence 344456778899999999999999999764 8899999998643 34568999999999999999999999999999999
Q ss_pred EEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCC
Q 003158 584 LVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAP 663 (843)
Q Consensus 584 lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~ 663 (843)
+||||+++|+|.+++.......+++..++.++.||++||+|||+++ |+||||||+|||++.++.+||+|||+++...
T Consensus 293 lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~ 369 (495)
T 1opk_A 293 IITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN---FIHRNLAARNCLVGENHLVKVADFGLSRLMT 369 (495)
T ss_dssp EEEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECGGGCEEECCTTCEECCT
T ss_pred EEEEccCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCChhhEEECCCCcEEEeecccceecc
Confidence 9999999999999998766667899999999999999999999999 9999999999999999999999999998764
Q ss_pred CCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHh-CCCCCCCCcchHHHHHHHhhcccchhhc
Q 003158 664 VPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVI 742 (843)
Q Consensus 664 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 742 (843)
... ........+++.|+|||++.+..++.++|||||||++|||++ |..||....... ... .+.
T Consensus 370 ~~~------~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~-~~~---------~~~ 433 (495)
T 1opk_A 370 GDT------YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-VYE---------LLE 433 (495)
T ss_dssp TCC------EECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG-HHH---------HHH
T ss_pred CCc------eeecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHHH-HHH---------HHH
Confidence 321 111123346778999999999999999999999999999999 999997544211 111 111
Q ss_pred cCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhh
Q 003158 743 DGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIW 786 (843)
Q Consensus 743 ~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~ 786 (843)
.+.....+..+++.+.+++..||+.+|.+||++.++++.|+.+.
T Consensus 434 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~ 477 (495)
T 1opk_A 434 KDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF 477 (495)
T ss_dssp TTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSC
T ss_pred cCCCCCCCCCCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHH
Confidence 22233456677889999999999999999999999999999864
No 88
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=1.7e-41 Score=374.36 Aligned_cols=260 Identities=22% Similarity=0.313 Sum_probs=195.3
Q ss_pred HcCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCChhhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEEec
Q 003158 510 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 588 (843)
Q Consensus 510 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e~ 588 (843)
.++|++.+.||+|+||+||+|+.. +++.||||++..... ..+.+.+|+.+++.++||||+++++++.+.+..++||||
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 97 (361)
T 3uc3_A 19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAA-IDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEY 97 (361)
T ss_dssp TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTT-SCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCcc-ccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEEe
Confidence 468999999999999999999975 789999999976432 335788999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCc--EEEeeccccccCCCCC
Q 003158 589 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFT--AKVADFGLSRLAPVPD 666 (843)
Q Consensus 589 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~--~kl~DfGla~~~~~~~ 666 (843)
+++|+|.+++.... .+++..++.++.|+++||+|||+++ |+||||||+||+++.++. +||+|||+++.....
T Consensus 98 ~~~~~L~~~l~~~~--~~~~~~~~~i~~ql~~~L~~LH~~~---ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~- 171 (361)
T 3uc3_A 98 ASGGELYERICNAG--RFSEDEARFFFQQLLSGVSYCHSMQ---ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLH- 171 (361)
T ss_dssp CCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTT---CCSCCCCGGGEEECSSSSCCEEECCCCCC-------
T ss_pred CCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEcCCCCceEEEeecCcccccccc-
Confidence 99999999997644 4889999999999999999999999 999999999999987765 999999999743221
Q ss_pred CCCcccceeeeeecccCCccCchhcccCCCCch-hhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhccCC
Q 003158 667 IEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDK-SDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGN 745 (843)
Q Consensus 667 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~-sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 745 (843)
.......||+.|+|||++.+..++.+ +|||||||++|||++|+.||........
T Consensus 172 -------~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~------------------ 226 (361)
T 3uc3_A 172 -------SQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRD------------------ 226 (361)
T ss_dssp ----------------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCC------------------
T ss_pred -------CCCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHH------------------
Confidence 12234569999999999998887666 8999999999999999999975332100
Q ss_pred CCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCCCCccCCCCCcccC
Q 003158 746 MGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSS 825 (843)
Q Consensus 746 ~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~sa~e~L~Hp~f~~ 825 (843)
....+..+. .... ..|. ....++.+.+||.+||..||++|||++|+++||||..
T Consensus 227 -------~~~~~~~~~----~~~~-~~~~--------------~~~~s~~~~~li~~~L~~dP~~Rps~~ell~hp~f~~ 280 (361)
T 3uc3_A 227 -------YRKTIQRIL----SVKY-SIPD--------------DIRISPECCHLISRIFVADPATRISIPEIKTHSWFLK 280 (361)
T ss_dssp -------HHHHHHHHH----TTCC-CCCT--------------TSCCCHHHHHHHHHHSCSCTTTSCCHHHHHTSHHHHT
T ss_pred -------HHHHHHHHh----cCCC-CCCC--------------cCCCCHHHHHHHHHHccCChhHCcCHHHHHhCcchhc
Confidence 000000000 0000 0000 0011222346888889999999999999999999965
Q ss_pred CC
Q 003158 826 DV 827 (843)
Q Consensus 826 ~~ 827 (843)
..
T Consensus 281 ~~ 282 (361)
T 3uc3_A 281 NL 282 (361)
T ss_dssp TC
T ss_pred CC
Confidence 43
No 89
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=5.8e-41 Score=364.60 Aligned_cols=267 Identities=24% Similarity=0.294 Sum_probs=207.8
Q ss_pred HHcCCCCCCcccccCCeeEEEEEeCCCcEEEEEEeccCChhhHHHHHHHHHHHHhccCCcccceeeeeecCC----cEEE
Q 003158 509 ATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEG----EQML 584 (843)
Q Consensus 509 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~----~~~l 584 (843)
..++|++.+.||+|+||+||+|++. ++.||||++.... .......+|+.++++++||||+++++++.+.. ..++
T Consensus 22 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~l 99 (322)
T 3soc_A 22 QSMPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQD-KQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWL 99 (322)
T ss_dssp TTEEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGGG-HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEE
T ss_pred chhhchhhheecccCceEEEEEEEC-CCEEEEEEeecCc-hHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEE
Confidence 4578999999999999999999875 7999999997533 33345677999999999999999999997754 3699
Q ss_pred EEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcC----------CCCCEEeccCCCCcEEEcCCCcEEEe
Q 003158 585 VYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTE----------ADPPVFHRDIKASNILLDHKFTAKVA 654 (843)
Q Consensus 585 V~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~----------~~~~iiH~Dlkp~NILl~~~~~~kl~ 654 (843)
||||+++|+|.++++.. .+++..++.++.|+++||+|||+. + |+||||||+|||++.++.+||+
T Consensus 100 v~e~~~~g~L~~~l~~~---~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~---ivH~Dlkp~Nill~~~~~~kL~ 173 (322)
T 3soc_A 100 ITAFHEKGSLSDFLKAN---VVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPA---ISHRDIKSKNVLLKNNLTACIA 173 (322)
T ss_dssp EEECCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECE---EECSCCSGGGEEECTTCCEEEC
T ss_pred EEecCCCCCHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHhhccccccccCCC---EEeCCCChHhEEECCCCeEEEc
Confidence 99999999999999764 489999999999999999999998 7 9999999999999999999999
Q ss_pred eccccccCCCCCCCCcccceeeeeecccCCccCchhcccC-----CCCchhhhHHHHHHHHHHHhCCCCCCCCcchH--H
Q 003158 655 DFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTH-----KLTDKSDVYSLGVVFLELLTGMQPISHGKNIV--R 727 (843)
Q Consensus 655 DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~--~ 727 (843)
|||+++....... ........||+.|+|||++.+. .++.++|||||||++|||+||+.||....+.. .
T Consensus 174 DFg~a~~~~~~~~-----~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~ 248 (322)
T 3soc_A 174 DFGLALKFEAGKS-----AGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLP 248 (322)
T ss_dssp CCTTCEEECTTSC-----CCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCT
T ss_pred cCCcccccccccC-----ccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccc
Confidence 9999986643321 1112335689999999999873 45668899999999999999999996532210 0
Q ss_pred HHHHHhhc---ccch-hhccCC-CCCC-----CHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhh
Q 003158 728 EVNIAYQS---SMMF-SVIDGN-MGSY-----PSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNM 788 (843)
Q Consensus 728 ~~~~~~~~---~~~~-~~~~~~-~~~~-----~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~ 788 (843)
........ ..+. ...... .+.. ...+++.+.+++.+||+.+|.+||++.++++.|+.+.+.
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~~ 319 (322)
T 3soc_A 249 FEEEIGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQRL 319 (322)
T ss_dssp THHHHCSSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred hhhhhccCCchhhhhhhhhcccCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence 00000000 0000 011111 1111 335677899999999999999999999999999998654
No 90
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=4.3e-41 Score=366.46 Aligned_cols=280 Identities=21% Similarity=0.302 Sum_probs=216.3
Q ss_pred ccccHHHHHHHHcCCCCC-CcccccCCeeEEEEEeC-CCcEEEEEEeccCC--hhhHHHHHHHHHHHHhc-cCCccccee
Q 003158 499 RSFTYGEMALATNNFNSS-TQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRL-HHRNLVSLV 573 (843)
Q Consensus 499 ~~~~~~~~~~~~~~~~~~-~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l-~h~nIv~l~ 573 (843)
+...+.......++|.+. +.||+|+||+||+|... +++.||+|++.... ......+.+|+.+++.+ +||||++++
T Consensus 16 ~n~~~~~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~ 95 (327)
T 3lm5_A 16 ENLYFQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLH 95 (327)
T ss_dssp CCCCSBCHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEE
T ss_pred hhhHHHHHHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEE
Confidence 345566667778888887 88999999999999965 69999999987533 23357889999999999 569999999
Q ss_pred eeeecCCcEEEEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcC---CCc
Q 003158 574 GYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDH---KFT 650 (843)
Q Consensus 574 ~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~---~~~ 650 (843)
+++.+.+..++||||+++|+|.+++.......+++..++.++.|++.||+|||+++ |+||||||+||+++. ++.
T Consensus 96 ~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~g---ivH~Dikp~NIl~~~~~~~~~ 172 (327)
T 3lm5_A 96 EVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNN---IVHLDLKPQNILLSSIYPLGD 172 (327)
T ss_dssp EEEECSSEEEEEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEESCBTTBCC
T ss_pred EEEEeCCeEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCC---eecCcCChHHEEEecCCCCCc
Confidence 99999999999999999999999997665667999999999999999999999999 999999999999998 789
Q ss_pred EEEeeccccccCCCCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHH
Q 003158 651 AKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVN 730 (843)
Q Consensus 651 ~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~ 730 (843)
+||+|||+++..... .......||+.|+|||++.+..++.++|||||||++|||++|+.||...........
T Consensus 173 ~kL~Dfg~a~~~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~ 244 (327)
T 3lm5_A 173 IKIVDFGMSRKIGHA--------CELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLN 244 (327)
T ss_dssp EEECCGGGCEEC-----------------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH
T ss_pred EEEeeCccccccCCc--------cccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHH
Confidence 999999999875422 112345699999999999999999999999999999999999999976543211110
Q ss_pred HHhhcccchhhccCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCC
Q 003158 731 IAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEET 810 (843)
Q Consensus 731 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~ 810 (843)
+........+... +.....+.+++.+||..||++
T Consensus 245 -----------------------------i~~~~~~~~~~~~-----------------~~~~~~~~~li~~~L~~dP~~ 278 (327)
T 3lm5_A 245 -----------------------------ISQVNVDYSEETF-----------------SSVSQLATDFIQSLLVKNPEK 278 (327)
T ss_dssp -----------------------------HHHTCCCCCTTTT-----------------TTSCHHHHHHHHHHSCSSGGG
T ss_pred -----------------------------HHhcccccCchhh-----------------cccCHHHHHHHHHHcCCChhh
Confidence 0000000000000 111222336788889999999
Q ss_pred CCCCccCCCCCcccCCCCCCccccc
Q 003158 811 PPSSSSMLKHPYVSSDVSGSNLVSG 835 (843)
Q Consensus 811 R~sa~e~L~Hp~f~~~~~~~~~~~~ 835 (843)
|||++|+|+||||++..+.....+.
T Consensus 279 Rpt~~~ll~h~~~~~~~~~~~~~~~ 303 (327)
T 3lm5_A 279 RPTAEICLSHSWLQQWDFENLFHPE 303 (327)
T ss_dssp SCCHHHHTTCGGGCCCCTTCC----
T ss_pred CcCHHHHhCCHhhcccccccccCcc
Confidence 9999999999999887765554443
No 91
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=2.6e-41 Score=358.71 Aligned_cols=254 Identities=22% Similarity=0.316 Sum_probs=185.3
Q ss_pred cCCCCCCcccccCCeeEEEEEe-CCCcEEEEEEeccCCh---hhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEE
Q 003158 511 NNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 586 (843)
Q Consensus 511 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~ 586 (843)
++|++.+.||+|+||+||+|.. .+++.||+|++..... ...+.+.+|+++++.++||||+++++++.+.+..++||
T Consensus 13 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 92 (275)
T 2eue_A 13 GNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI 92 (275)
T ss_dssp CCBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEEEE
T ss_pred cceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEEEe
Confidence 5799999999999999999995 4789999999875432 23567899999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCC
Q 003158 587 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 666 (843)
Q Consensus 587 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~ 666 (843)
||+ +++|.+++... ..+++..++.++.|+++||.|||+.+ |+||||||+||++++++.+||+|||++......
T Consensus 93 e~~-~~~l~~~~~~~--~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~- 165 (275)
T 2eue_A 93 EYA-GNELFDYIVQR--DKMSEQEARRFFQQIISAVEYCHRHK---IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG- 165 (275)
T ss_dssp ECC-CEEHHHHHHTS--SSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEECTTSCEEECCSSCC-------
T ss_pred hhc-CCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC---CeeccCChHhEEECCCCCEEEeecccceeccCc-
Confidence 999 77888888654 35889999999999999999999999 999999999999999999999999999765422
Q ss_pred CCCcccceeeeeecccCCccCchhcccCCC-CchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhccCC
Q 003158 667 IEGIVPAHVSTVVKGTPGYLDPEYFLTHKL-TDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGN 745 (843)
Q Consensus 667 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 745 (843)
.......||+.|+|||.+.+..+ +.++|||||||++|||++|+.||........ .
T Consensus 166 -------~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-~---------------- 221 (275)
T 2eue_A 166 -------NFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVL-F---------------- 221 (275)
T ss_dssp ----------------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSSHHHH-H----------------
T ss_pred -------ccccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHH-H----------------
Confidence 12234468999999999988765 7899999999999999999999975432110 0
Q ss_pred CCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCCCCccCCCCCcccC
Q 003158 746 MGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSS 825 (843)
Q Consensus 746 ~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~sa~e~L~Hp~f~~ 825 (843)
+.+.......|. ..++...+++.+||+.||++|||++|+|+||||+.
T Consensus 222 -------------~~~~~~~~~~~~--------------------~~~~~~~~li~~~l~~dP~~Rps~~e~l~h~~f~~ 268 (275)
T 2eue_A 222 -------------KNISNGVYTLPK--------------------FLSPGAAGLIKRMLIVNPLNRISIHEIMQDDWFKV 268 (275)
T ss_dssp -------------HHHHHTCCCCCT--------------------TSCHHHHHHHHHHSCSSGGGSCCHHHHTTCHHHHT
T ss_pred -------------HHHHhCCCCCCc--------------------cCCHHHHHHHHHHhhcCHhHCCCHHHHhhCCeecc
Confidence 000000000010 01122346788889999999999999999999988
Q ss_pred CCC
Q 003158 826 DVS 828 (843)
Q Consensus 826 ~~~ 828 (843)
+..
T Consensus 269 ~~~ 271 (275)
T 2eue_A 269 DLP 271 (275)
T ss_dssp TCC
T ss_pred cch
Confidence 643
No 92
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=2.8e-41 Score=373.71 Aligned_cols=260 Identities=27% Similarity=0.437 Sum_probs=214.5
Q ss_pred HcCCCCCCcccccCCeeEEEEEeC------CCcEEEEEEeccC-ChhhHHHHHHHHHHHHhccCCcccceeeeeecCCcE
Q 003158 510 TNNFNSSTQIGQGGYGKVYKGILP------DGTVVAVKRAQEG-SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQ 582 (843)
Q Consensus 510 ~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~ 582 (843)
.++|++.+.||+|+||+||+|.+. +++.||||++... ......++.+|+.+++.++||||+++++++.+.+..
T Consensus 70 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~ 149 (367)
T 3l9p_A 70 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR 149 (367)
T ss_dssp GGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred HhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCC
Confidence 467888999999999999999953 4678999999754 334456789999999999999999999999999999
Q ss_pred EEEEecCCCCCHHHHHhhcCC-----CCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCC---cEEEe
Q 003158 583 MLVYEFMSNGTLRDQLSAKSK-----EPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKF---TAKVA 654 (843)
Q Consensus 583 ~lV~e~~~~gsL~~~l~~~~~-----~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~---~~kl~ 654 (843)
++||||+++|+|.+++..... ..+++..++.++.||++||+|||+++ |+||||||+|||++.++ .+||+
T Consensus 150 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~~~~~~~kL~ 226 (367)
T 3l9p_A 150 FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIG 226 (367)
T ss_dssp EEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESCSSTTCCEEEC
T ss_pred EEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChhhEEEecCCCCceEEEC
Confidence 999999999999999976432 35889999999999999999999999 99999999999999555 59999
Q ss_pred eccccccCCCCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHh-CCCCCCCCcchHHHHHHHh
Q 003158 655 DFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAY 733 (843)
Q Consensus 655 DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~ellt-g~~pf~~~~~~~~~~~~~~ 733 (843)
|||+++....... ........||+.|+|||++.+..++.++|||||||++|||++ |..||...... +...
T Consensus 227 DFG~a~~~~~~~~-----~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~-~~~~--- 297 (367)
T 3l9p_A 227 DFGMARDIYRAGY-----YRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ-EVLE--- 297 (367)
T ss_dssp CCHHHHHHHHHSS-----CTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH-HHHH---
T ss_pred CCccccccccccc-----cccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH-HHHH---
Confidence 9999975422110 111233457899999999999999999999999999999998 99999765432 1111
Q ss_pred hcccchhhccCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhh
Q 003158 734 QSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWN 787 (843)
Q Consensus 734 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~ 787 (843)
.+..+.....+..++..+.+++.+||+.+|.+||++.++++.|+.+..
T Consensus 298 ------~i~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~ 345 (367)
T 3l9p_A 298 ------FVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQ 345 (367)
T ss_dssp ------HHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ------HHHcCCCCCCCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhh
Confidence 222233344566677889999999999999999999999999998765
No 93
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=1.2e-40 Score=357.30 Aligned_cols=261 Identities=25% Similarity=0.387 Sum_probs=209.2
Q ss_pred HcCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCC---hhhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEE
Q 003158 510 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLV 585 (843)
Q Consensus 510 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV 585 (843)
.++|++.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|+++++.++||||+++++++.+.+..++|
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 89 (294)
T 4eqm_A 10 NERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLV 89 (294)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEE
T ss_pred hccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEE
Confidence 467999999999999999999964 68999999986432 23346789999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCC
Q 003158 586 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVP 665 (843)
Q Consensus 586 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~ 665 (843)
|||+++++|.+++.... ++++..++.++.|+++||+|||+++ |+||||||+||+++.++.+||+|||+++.....
T Consensus 90 ~e~~~g~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 164 (294)
T 4eqm_A 90 MEYIEGPTLSEYIESHG--PLSVDTAINFTNQILDGIKHAHDMR---IVHRDIKPQNILIDSNKTLKIFDFGIAKALSET 164 (294)
T ss_dssp EECCCSCBHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCCSSSTTC---
T ss_pred EeCCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEEeCCCccccccc
Confidence 99999999999997654 5889999999999999999999999 999999999999999999999999999865432
Q ss_pred CCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhccCC
Q 003158 666 DIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGN 745 (843)
Q Consensus 666 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 745 (843)
. ........||+.|+|||.+.+..++.++|||||||++|||++|+.||............ .... ....
T Consensus 165 ~------~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~-~~~~-~~~~---- 232 (294)
T 4eqm_A 165 S------LTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKH-IQDS-VPNV---- 232 (294)
T ss_dssp ----------------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHHHHHH-HSSC-CCCH----
T ss_pred c------ccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHH-hhcc-CCCc----
Confidence 1 11223456999999999999999999999999999999999999999765543222111 1110 0000
Q ss_pred CCCCCHHHHHHHHHHHHHhcccCCCCCC-CHHHHHHHHHHhhh
Q 003158 746 MGSYPSECVEKFIKLALKCCQDETDARP-SMSEVMRELESIWN 787 (843)
Q Consensus 746 ~~~~~~~~~~~l~~l~~~c~~~~p~~RP-s~~~vl~~L~~~~~ 787 (843)
....+..+++.+.+++.+|++.+|.+|| ++.++.+.|+.+..
T Consensus 233 ~~~~~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~~ 275 (294)
T 4eqm_A 233 TTDVRKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSVLH 275 (294)
T ss_dssp HHHSCTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSSS
T ss_pred chhcccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHHHh
Confidence 0012334567889999999999999998 88899988887643
No 94
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=1.8e-41 Score=402.85 Aligned_cols=274 Identities=19% Similarity=0.284 Sum_probs=218.4
Q ss_pred HHHcCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCC---hhhHHHHHHHHHHHHhc-cCCcccceeeeeecCCcE
Q 003158 508 LATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQ 582 (843)
Q Consensus 508 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~ 582 (843)
...++|++.+.||+|+||+||+|... +++.||||+++... ....+.+..|.+++..+ +||+|+++++++.+.+..
T Consensus 338 ~~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~ 417 (674)
T 3pfq_A 338 MKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRL 417 (674)
T ss_dssp --CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEE
T ss_pred ccccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEE
Confidence 34578999999999999999999965 68999999987532 12235678899999987 799999999999999999
Q ss_pred EEEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccC
Q 003158 583 MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLA 662 (843)
Q Consensus 583 ~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~ 662 (843)
++||||+++|+|.++++... .+++..++.++.||+.||+|||+++ ||||||||+|||++.++.+||+|||+|+..
T Consensus 418 ~lV~E~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~g---IiHrDLKp~NILl~~~g~ikL~DFGla~~~ 492 (674)
T 3pfq_A 418 YFVMEYVNGGDLMYHIQQVG--RFKEPHAVFYAAEIAIGLFFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKEN 492 (674)
T ss_dssp EEEEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTS---EECCCCCSTTEEECSSSCEEECCCTTCEEC
T ss_pred EEEEeCcCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCC---eEeccCChhhEEEcCCCcEEEeecceeecc
Confidence 99999999999999997654 4889999999999999999999999 999999999999999999999999999854
Q ss_pred CCCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhc
Q 003158 663 PVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVI 742 (843)
Q Consensus 663 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 742 (843)
.... .......||+.|+|||++.+..++.++|||||||++|||++|+.||..... .+.... +.
T Consensus 493 ~~~~-------~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~-~~~~~~---------i~ 555 (674)
T 3pfq_A 493 IWDG-------VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE-DELFQS---------IM 555 (674)
T ss_dssp CCTT-------CCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHH---------HH
T ss_pred ccCC-------cccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCH-HHHHHH---------HH
Confidence 3221 223456799999999999999999999999999999999999999976432 111111 11
Q ss_pred cCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCCCC-----ccC
Q 003158 743 DGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSS-----SSM 817 (843)
Q Consensus 743 ~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~sa-----~e~ 817 (843)
.. ...+|... ++.+.+||++||+.||++|+++ +|+
T Consensus 556 ~~-~~~~p~~~---------------------------------------s~~~~~li~~lL~~dP~~R~~~~~~~~~ei 595 (674)
T 3pfq_A 556 EH-NVAYPKSM---------------------------------------SKEAVAICKGLMTKHPGKRLGCGPEGERDI 595 (674)
T ss_dssp SS-CCCCCTTS---------------------------------------CHHHHHHHHHHSCSSSTTCTTCSTTHHHHH
T ss_pred hC-CCCCCccC---------------------------------------CHHHHHHHHHHccCCHHHCCCCCCCcHHHH
Confidence 11 11122211 2223467777788888888887 899
Q ss_pred CCCCcccCCCCCCccccccCCCCCCC
Q 003158 818 LKHPYVSSDVSGSNLVSGVIPTITPR 843 (843)
Q Consensus 818 L~Hp~f~~~~~~~~~~~~~~~~~~~~ 843 (843)
++||||++..+.........|++.|+
T Consensus 596 ~~h~ff~~i~w~~l~~~~~~pp~~p~ 621 (674)
T 3pfq_A 596 KEHAFFRYIDWEKLERKEIQPPYKPK 621 (674)
T ss_dssp HSSGGGSSCCHHHHTTTCSCCSCCCB
T ss_pred hcCccccCCCHHHHHhCCCCCCCCCc
Confidence 99999998777666666677888774
No 95
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=4.8e-41 Score=359.01 Aligned_cols=264 Identities=30% Similarity=0.459 Sum_probs=222.5
Q ss_pred HHHHHHcCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCChhhHHHHHHHHHHHHhccCCcccceeeeeecCCcEE
Q 003158 505 EMALATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQM 583 (843)
Q Consensus 505 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~ 583 (843)
++....++|++.+.||+|+||+||+|.+. +++.||+|++.... ...+.+.+|+++++.++||||+++++++.+++..+
T Consensus 7 ~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 85 (288)
T 3kfa_A 7 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFY 85 (288)
T ss_dssp TTBCCGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCS-THHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEE
T ss_pred cccccccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCH-HHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEE
Confidence 44456778999999999999999999976 58899999997543 34567899999999999999999999999999999
Q ss_pred EEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCC
Q 003158 584 LVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAP 663 (843)
Q Consensus 584 lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~ 663 (843)
+||||+++++|.+++.......+++..++.++.|++.||+|||+++ |+||||||+||+++.++.+||+|||++....
T Consensus 86 ~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~ 162 (288)
T 3kfa_A 86 IITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMT 162 (288)
T ss_dssp EEEECCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHHT---CCCSCCSGGGEEECGGGCEEECCCCGGGTSC
T ss_pred EEEEcCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHCC---ccCCCCCcceEEEcCCCCEEEccCccceecc
Confidence 9999999999999998877777999999999999999999999999 9999999999999999999999999998764
Q ss_pred CCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHh-CCCCCCCCcchHHHHHHHhhcccchhhc
Q 003158 664 VPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVI 742 (843)
Q Consensus 664 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 742 (843)
... ........+++.|+|||.+.+..++.++||||||+++|||++ |..||....... ... .+.
T Consensus 163 ~~~------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~-~~~---------~~~ 226 (288)
T 3kfa_A 163 GDT------YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-VYE---------LLE 226 (288)
T ss_dssp SSS------SEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG-HHH---------HHH
T ss_pred CCc------cccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH-HHH---------HHh
Confidence 322 122334557889999999999999999999999999999999 999987543211 111 111
Q ss_pred cCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhh
Q 003158 743 DGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNM 788 (843)
Q Consensus 743 ~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~ 788 (843)
.......+..+++.+.+++..|+..+|.+||++.++++.|+.+...
T Consensus 227 ~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~~~~ 272 (288)
T 3kfa_A 227 KDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQE 272 (288)
T ss_dssp TTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred ccCCCCCCCCCCHHHHHHHHHHhCCChhhCcCHHHHHHHHHHHHHh
Confidence 1222344566778899999999999999999999999999987653
No 96
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=3.6e-40 Score=355.66 Aligned_cols=266 Identities=26% Similarity=0.453 Sum_probs=211.5
Q ss_pred HHcCCCCCCcccccCCeeEEEEEeCCCcEEEEEEeccC--ChhhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEE
Q 003158 509 ATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEG--SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 586 (843)
Q Consensus 509 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~ 586 (843)
..++|.+.+.||+|+||+||+|.+. ..+|+|+++.. .....+.+.+|+++++.++||||+++++++. .+..++||
T Consensus 34 ~~~~~~~~~~lG~G~~g~Vy~~~~~--~~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~lv~ 110 (307)
T 3lb7_A 34 EASEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT-KDNLAIVT 110 (307)
T ss_dssp CTTSCCEEEEEEECSSCEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEE
T ss_pred cccceEEEeEecCCCCeEEEEEEEC--CEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc-cCcEEEEE
Confidence 3468899999999999999999864 35899988753 2334578899999999999999999999875 45689999
Q ss_pred ecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCC
Q 003158 587 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 666 (843)
Q Consensus 587 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~ 666 (843)
||+++|+|.+++... ...+++..++.++.||++||+|||+++ |+||||||+|||+++++.+||+|||+++......
T Consensus 111 e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~~~~ 186 (307)
T 3lb7_A 111 QWCEGSSLYKHLHVQ-ETKFQMFQLIDIARQTAQGMDYLHAKN---IIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWS 186 (307)
T ss_dssp ECCSSCBHHHHHHTS-CCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCSSSEEECTTSCEEECCCCSSCC-----
T ss_pred ecCCCCcHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHhCC---EeeCCCChhhEEEcCCCCEEEccCCCceeccccc
Confidence 999999999999654 346899999999999999999999999 9999999999999999999999999998654211
Q ss_pred CCCcccceeeeeecccCCccCchhcc---cCCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhcc
Q 003158 667 IEGIVPAHVSTVVKGTPGYLDPEYFL---THKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVID 743 (843)
Q Consensus 667 ~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 743 (843)
.........||+.|+|||++. +..++.++|||||||++|||++|+.||............. .. ....
T Consensus 187 -----~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~-~~----~~~~ 256 (307)
T 3lb7_A 187 -----GSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMV-GR----GYAS 256 (307)
T ss_dssp ------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHH-HH----TCCC
T ss_pred -----ccccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCcHHHHHHHH-hc----CCCC
Confidence 112233456999999999997 5678899999999999999999999998655433222211 11 1111
Q ss_pred CCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCC
Q 003158 744 GNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPE 791 (843)
Q Consensus 744 ~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~ 791 (843)
+........+++.+.+++..||+.+|.+||++.++++.++.+...++.
T Consensus 257 ~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~il~~l~~l~~~~pk 304 (307)
T 3lb7_A 257 PDLSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSLPK 304 (307)
T ss_dssp CCSTTSCSSSCHHHHHHHHHHSCSSSTTSCCHHHHHHHHHHHHTTCCC
T ss_pred cchhhhhcCCcHHHHHHHHHHhhCChhhCcCHHHHHHHHHHHHhhccc
Confidence 222233456678899999999999999999999999999998876654
No 97
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=3.9e-40 Score=355.54 Aligned_cols=261 Identities=27% Similarity=0.456 Sum_probs=207.8
Q ss_pred cCCCCCCcccccCCeeEEEEEeCCCcEEEEEEeccCChhhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEEecCC
Q 003158 511 NNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMS 590 (843)
Q Consensus 511 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e~~~ 590 (843)
++|++.+.||+|+||+||+|.+. ++.||||++... ...+.+.+|++++++++||||+++++++.+ ..++||||++
T Consensus 8 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~~~lv~e~~~ 82 (307)
T 2eva_A 8 KEIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIESE--SERKAFIVELRQLSRVNHPNIVKLYGACLN--PVCLVMEYAE 82 (307)
T ss_dssp GGEEEEEEEECCSSSEEEEEEET-TEEEEEEECSST--THHHHHHHHHHHHHHCCCTTBCCEEEBCTT--TTEEEEECCT
T ss_pred hHeeeeeEeecCCCceEEEEEEC-CeeEEEEEecCh--hHHHHHHHHHHHHhcCCCCCcCeEEEEEcC--CcEEEEEcCC
Confidence 56888999999999999999974 788999998743 345678999999999999999999999874 5899999999
Q ss_pred CCCHHHHHhhcCC-CCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCc-EEEeeccccccCCCCCCC
Q 003158 591 NGTLRDQLSAKSK-EPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFT-AKVADFGLSRLAPVPDIE 668 (843)
Q Consensus 591 ~gsL~~~l~~~~~-~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~-~kl~DfGla~~~~~~~~~ 668 (843)
+|+|.+++..... ..+++..++.++.|+++||+|||+.+..+|+||||||+||+++.++. +||+|||++......
T Consensus 83 ~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~--- 159 (307)
T 2eva_A 83 GGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH--- 159 (307)
T ss_dssp TCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC----------
T ss_pred CCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccccccc---
Confidence 9999999976443 24678889999999999999999932223999999999999998886 799999999754321
Q ss_pred CcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhccCCCCC
Q 003158 669 GIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGS 748 (843)
Q Consensus 669 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 748 (843)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||........... .....+....
T Consensus 160 -------~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~--------~~~~~~~~~~ 224 (307)
T 2eva_A 160 -------MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIM--------WAVHNGTRPP 224 (307)
T ss_dssp ------------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHHH--------HHHHTTCCCC
T ss_pred -------cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHHHH--------HHHhcCCCCC
Confidence 1234589999999999999999999999999999999999999975433221111 1112223334
Q ss_pred CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCCCCC
Q 003158 749 YPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDT 794 (843)
Q Consensus 749 ~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~ 794 (843)
.+..++..+.+++.+||+.+|.+||++.++++.|+.+...++..+.
T Consensus 225 ~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~~~~~ 270 (307)
T 2eva_A 225 LIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRYFPGADE 270 (307)
T ss_dssp CBTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHGGGCCCTTS
T ss_pred cccccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhccCCCC
Confidence 4556677899999999999999999999999999999887765443
No 98
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=5.5e-41 Score=357.38 Aligned_cols=258 Identities=27% Similarity=0.423 Sum_probs=204.0
Q ss_pred HHcCCCCCCcccccCCeeEEEEEeCC----CcEEEEEEeccCC-hhhHHHHHHHHHHHHhccCCcccceeeeeecCCcEE
Q 003158 509 ATNNFNSSTQIGQGGYGKVYKGILPD----GTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQM 583 (843)
Q Consensus 509 ~~~~~~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~ 583 (843)
..++|++.+.||+|+||+||+|.... +..||+|++.... ....+.+.+|+.+++.++||||+++++++. ++..+
T Consensus 13 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~ 91 (281)
T 1mp8_A 13 QRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVW 91 (281)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCE
T ss_pred ehHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCccE
Confidence 45689999999999999999999642 5679999987543 334567899999999999999999999985 46789
Q ss_pred EEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCC
Q 003158 584 LVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAP 663 (843)
Q Consensus 584 lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~ 663 (843)
+||||+++|+|.+++... ...+++..++.++.|+++||+|||+++ |+||||||+||+++.++.+||+|||+++...
T Consensus 92 lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 167 (281)
T 1mp8_A 92 IIMELCTLGELRSFLQVR-KYSLDLASLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYME 167 (281)
T ss_dssp EEEECCTTEEHHHHHHHT-TTTSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECC--------
T ss_pred EEEecCCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCC---eecccccHHHEEECCCCCEEECccccccccC
Confidence 999999999999999764 346889999999999999999999999 9999999999999999999999999998764
Q ss_pred CCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHh-CCCCCCCCcchHHHHHHHhhcccchhhc
Q 003158 664 VPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVI 742 (843)
Q Consensus 664 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 742 (843)
... ........+++.|+|||.+.+..++.++|||||||++|||++ |..||........ ...+.
T Consensus 168 ~~~------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~~----------~~~i~ 231 (281)
T 1mp8_A 168 DST------YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDV----------IGRIE 231 (281)
T ss_dssp -----------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGH----------HHHHH
T ss_pred ccc------ccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHHH----------HHHHH
Confidence 322 111233456788999999999999999999999999999997 9999976543211 11222
Q ss_pred cCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhh
Q 003158 743 DGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWN 787 (843)
Q Consensus 743 ~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~ 787 (843)
.+.....+..+++.+.+++..||+.+|.+||++.++++.|+.+.+
T Consensus 232 ~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~ 276 (281)
T 1mp8_A 232 NGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILE 276 (281)
T ss_dssp TTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred cCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 233344566778889999999999999999999999999998765
No 99
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=4.6e-41 Score=357.53 Aligned_cols=265 Identities=28% Similarity=0.455 Sum_probs=218.3
Q ss_pred HHHHHHcCCCCCCcccccCCeeEEEEEeCCCcEEEEEEeccCChhhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEE
Q 003158 505 EMALATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQML 584 (843)
Q Consensus 505 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~l 584 (843)
++....++|++.+.||+|+||.||+|...+++.||||++.... ...+.+.+|+++++.++||||+++++++.+ +..++
T Consensus 7 ~~~v~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~ 84 (279)
T 1qpc_A 7 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYI 84 (279)
T ss_dssp TTBCCGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEE
T ss_pred hcccCHHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCc-ccHHHHHHHHHHHHhCCCcCcceEEEEEcC-CCcEE
Confidence 3444567899999999999999999998888899999997543 345688999999999999999999999874 56899
Q ss_pred EEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCC
Q 003158 585 VYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPV 664 (843)
Q Consensus 585 V~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~ 664 (843)
||||+++++|.+++.......+++..++.++.|+++||+|||+++ |+||||||+||++++++.+||+|||++.....
T Consensus 85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 161 (279)
T 1qpc_A 85 ITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIED 161 (279)
T ss_dssp EEECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTSCEEECCCTTCEECSS
T ss_pred EEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHhhEEEcCCCCEEECCCcccccccC
Confidence 999999999999997544335889999999999999999999999 99999999999999999999999999987643
Q ss_pred CCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHh-CCCCCCCCcchHHHHHHHhhcccchhhcc
Q 003158 665 PDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVID 743 (843)
Q Consensus 665 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 743 (843)
.. ........++..|+|||.+.+..++.++|||||||++|||++ |+.||...... +... .+..
T Consensus 162 ~~------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~-~~~~---------~~~~ 225 (279)
T 1qpc_A 162 NE------YTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNP-EVIQ---------NLER 225 (279)
T ss_dssp SC------EECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHH-HHHH---------HHHT
T ss_pred cc------cccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHH-HHHH---------HHhc
Confidence 22 111223456788999999998899999999999999999999 89999765432 1111 1112
Q ss_pred CCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCC
Q 003158 744 GNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMP 790 (843)
Q Consensus 744 ~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~ 790 (843)
+.....+..+++.+.+++..|++.+|.+||++.++++.|+.+.....
T Consensus 226 ~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~ 272 (279)
T 1qpc_A 226 GYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTATE 272 (279)
T ss_dssp TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC-
T ss_pred ccCCCCcccccHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHhcc
Confidence 22233455667889999999999999999999999999999876543
No 100
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=5.9e-41 Score=378.66 Aligned_cols=286 Identities=20% Similarity=0.258 Sum_probs=211.7
Q ss_pred HcCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCChhhHHHHHHHHHHHHhc------cCCcccceeeeeecCCcE
Q 003158 510 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRL------HHRNLVSLVGYCDEEGEQ 582 (843)
Q Consensus 510 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l------~h~nIv~l~~~~~~~~~~ 582 (843)
..+|++.+.||+|+||+||+|... +++.||||++... ....+++.+|+++++.+ .|+||+++++++...+..
T Consensus 96 ~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~ 174 (429)
T 3kvw_A 96 AYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE-KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHI 174 (429)
T ss_dssp TTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEE
T ss_pred cCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCc-cchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeE
Confidence 457999999999999999999865 5899999999753 33346778899888887 467999999999999999
Q ss_pred EEEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCc--EEEeeccccc
Q 003158 583 MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFT--AKVADFGLSR 660 (843)
Q Consensus 583 ~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~--~kl~DfGla~ 660 (843)
++||||+. ++|.+++.......+++..++.++.||++||+|||+++ |+||||||+|||++.++. +||+|||+|+
T Consensus 175 ~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlKp~NILl~~~~~~~vkL~DFG~a~ 250 (429)
T 3kvw_A 175 CMTFELLS-MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNR---IIHCDLKPENILLKQQGRSGIKVIDFGSSC 250 (429)
T ss_dssp EEEECCCC-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHHT---EECSCCSGGGEEESSTTSCCEEECCCTTCE
T ss_pred EEEEeccC-CCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEEccCCCcceEEeecccce
Confidence 99999995 79999998876667999999999999999999999999 999999999999999987 9999999997
Q ss_pred cCCCCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchh
Q 003158 661 LAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFS 740 (843)
Q Consensus 661 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~ 740 (843)
..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||...... +.+.....
T Consensus 251 ~~~~~----------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~-~~l~~i~~------ 313 (429)
T 3kvw_A 251 YEHQR----------VYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEG-DQLACMIE------ 313 (429)
T ss_dssp ETTCC----------CCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHH------
T ss_pred ecCCc----------ccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCCHH-HHHHHHHH------
Confidence 64321 23356899999999999999999999999999999999999999765432 22221110
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHhcccCCCC---------------------------CCCHHHHHHHHHHhhhhCCCCC
Q 003158 741 VIDGNMGSYPSECVEKFIKLALKCCQDETDA---------------------------RPSMSEVMRELESIWNMMPESD 793 (843)
Q Consensus 741 ~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~---------------------------RPs~~~vl~~L~~~~~~~~~~~ 793 (843)
. .+..+.+....... ....+...... .|...+....+ ....+
T Consensus 314 ~----~~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l------~~~~~ 382 (429)
T 3kvw_A 314 L----LGMPSQKLLDASKR-AKNFVSSKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNAL------KGCDD 382 (429)
T ss_dssp H----HCCCCHHHHHTBTT-HHHHBCTTSCBTTSCEECCCC--CEECCEECTTCCEECSTTCSCHHHHT------TTCCC
T ss_pred H----cCCCCHHHHHhhhh-hhhccCCCCCcccccccccccccccccccccchhhccCCccchhhHhhc------cccch
Confidence 0 11122222211111 01111100000 00001111000 01223
Q ss_pred CCCCccccCCCCCCCCCCCCCccCCCCCcccCCCC
Q 003158 794 TKTPEFINSEHTSKEETPPSSSSMLKHPYVSSDVS 828 (843)
Q Consensus 794 ~~~~dll~~~L~~dp~~R~sa~e~L~Hp~f~~~~~ 828 (843)
+.+.+||.+||++||++||||+|+|+||||+....
T Consensus 383 ~~~~dli~~~L~~dP~~Rpta~e~L~Hpw~~~~~~ 417 (429)
T 3kvw_A 383 PLFLDFLKQCLEWDPAVRMTPGQALRHPWLRRRLP 417 (429)
T ss_dssp HHHHHHHHHHTCSSTTTSCCHHHHHTSTTTC----
T ss_pred HHHHHHHHHHCCCChhhCCCHHHHhCChhhccCCC
Confidence 44568999999999999999999999999987544
No 101
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.6e-41 Score=375.60 Aligned_cols=276 Identities=22% Similarity=0.371 Sum_probs=206.5
Q ss_pred HcCCCCCCcccccCCeeEEEEEe-CCCcEEEEEEeccC--ChhhHHHHHHHHHHHHhccCCcccceeeeeecC------C
Q 003158 510 TNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEG--SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE------G 580 (843)
Q Consensus 510 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~------~ 580 (843)
.++|++.+.||+|+||.||+|.. .+|+.||||++... .....+++.+|+++++.++||||+++++++... .
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 103 (367)
T 1cm8_A 24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT 103 (367)
T ss_dssp BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCc
Confidence 35788999999999999999996 47999999998643 223356789999999999999999999999765 3
Q ss_pred cEEEEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccc
Q 003158 581 EQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSR 660 (843)
Q Consensus 581 ~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~ 660 (843)
..++||||+ +++|.+++.. ..+++..+..++.||++||+|||+.+ |+||||||+||+++.++.+||+|||+++
T Consensus 104 ~~~lv~e~~-~~~L~~~~~~---~~l~~~~~~~~~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 176 (367)
T 1cm8_A 104 DFYLVMPFM-GTDLGKLMKH---EKLGEDRIQFLVYQMLKGLRYIHAAG---IIHRDLKPGNLAVNEDCELKILDFGLAR 176 (367)
T ss_dssp CCEEEEECC-SEEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCE
T ss_pred eEEEEEecC-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCcCHHHEEEcCCCCEEEEeeeccc
Confidence 469999999 8899999976 34889999999999999999999999 9999999999999999999999999998
Q ss_pred cCCCCCCCCcccceeeeeecccCCccCchhccc-CCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccch
Q 003158 661 LAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMF 739 (843)
Q Consensus 661 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~ 739 (843)
..... .....||+.|+|||++.+ ..++.++||||+||++|||++|+.||...... +++.....
T Consensus 177 ~~~~~----------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-~~l~~i~~----- 240 (367)
T 1cm8_A 177 QADSE----------MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHL-DQLKEIMK----- 240 (367)
T ss_dssp ECCSS----------CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHH-----
T ss_pred ccccc----------cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHH-----
Confidence 65321 234568999999999987 77999999999999999999999999765432 22222111
Q ss_pred hhccCCCCCCCHHHHHHH-----HHHHHHhcccCCCC-CCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCCC
Q 003158 740 SVIDGNMGSYPSECVEKF-----IKLALKCCQDETDA-RPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPS 813 (843)
Q Consensus 740 ~~~~~~~~~~~~~~~~~l-----~~l~~~c~~~~p~~-RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~s 813 (843)
..+..+.+....+ ...+.. -|.. +.. +...++...+.+.+|+.+||+.||++|+|
T Consensus 241 -----~~g~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~----------~~~~~~~~~~~~~~ll~~mL~~dP~~R~t 301 (367)
T 1cm8_A 241 -----VTGTPPAEFVQRLQSDEAKNYMKG----LPELEKKD----------FASILTNASPLAVNLLEKMLVLDAEQRVT 301 (367)
T ss_dssp -----HHCCCCHHHHHTCSCHHHHHHHHH----SCCCCCCC----------GGGTCTTCCHHHHHHHHHHSCSSTTTSCC
T ss_pred -----hcCCCCHHHHHHhhhHHHHHHHHh----CCCCCCCC----------HHHHCCCCCHHHHHHHHHHccCChhHCCC
Confidence 0112233222211 111111 1111 111 11223344555678999999999999999
Q ss_pred CccCCCCCcccCCC
Q 003158 814 SSSMLKHPYVSSDV 827 (843)
Q Consensus 814 a~e~L~Hp~f~~~~ 827 (843)
++|+|+||||.+..
T Consensus 302 ~~e~l~hp~f~~~~ 315 (367)
T 1cm8_A 302 AGEALAHPYFESLH 315 (367)
T ss_dssp HHHHHHSGGGTTTC
T ss_pred HHHHhcChHHHhhc
Confidence 99999999997643
No 102
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=5.8e-41 Score=364.78 Aligned_cols=264 Identities=28% Similarity=0.419 Sum_probs=202.1
Q ss_pred HHHHHcCCCCCCcccccCCeeEEEEEeCC-C---cEEEEEEeccC--ChhhHHHHHHHHHHHHhccCCcccceeeeeecC
Q 003158 506 MALATNNFNSSTQIGQGGYGKVYKGILPD-G---TVVAVKRAQEG--SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE 579 (843)
Q Consensus 506 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~-~---~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~ 579 (843)
.....++|++.+.||+|+||+||+|.... + ..||||++... .....+++.+|++++++++||||+++++++...
T Consensus 18 ~~i~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 97 (323)
T 3qup_A 18 VLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRS 97 (323)
T ss_dssp TBCC---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC
T ss_pred cccChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeecc
Confidence 33456789999999999999999999653 3 38999998754 233457899999999999999999999999776
Q ss_pred CcE------EEEEecCCCCCHHHHHhhcC----CCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCC
Q 003158 580 GEQ------MLVYEFMSNGTLRDQLSAKS----KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKF 649 (843)
Q Consensus 580 ~~~------~lV~e~~~~gsL~~~l~~~~----~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~ 649 (843)
... ++||||+++|+|.+++.... ...+++..++.++.|+++||+|||+++ |+||||||+||++++++
T Consensus 98 ~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~---ivH~Dikp~NIli~~~~ 174 (323)
T 3qup_A 98 RAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRN---FIHRDLAARNCMLAEDM 174 (323)
T ss_dssp -------CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECTTS
T ss_pred ccccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcCC---cccCCCCcceEEEcCCC
Confidence 655 99999999999999996532 225889999999999999999999999 99999999999999999
Q ss_pred cEEEeeccccccCCCCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHh-CCCCCCCCcchHHH
Q 003158 650 TAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVRE 728 (843)
Q Consensus 650 ~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~ellt-g~~pf~~~~~~~~~ 728 (843)
.+||+|||+++....... ........+++.|+|||.+.+..++.++|||||||++|||++ |+.||........
T Consensus 175 ~~kl~Dfg~a~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~- 248 (323)
T 3qup_A 175 TVCVADFGLSRKIYSGDY-----YRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEI- 248 (323)
T ss_dssp CEEECCCCC----------------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGH-
T ss_pred CEEEeecccccccccccc-----ccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHHH-
Confidence 999999999986543221 112233456788999999999999999999999999999999 8999976543211
Q ss_pred HHHHhhcccchhhccCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhh
Q 003158 729 VNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWN 787 (843)
Q Consensus 729 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~ 787 (843)
...+..+.....+..+++.+.+++.+||+.+|.+||++.++++.|+++.+
T Consensus 249 ---------~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~ 298 (323)
T 3qup_A 249 ---------YNYLIGGNRLKQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILG 298 (323)
T ss_dssp ---------HHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ---------HHHHhcCCCCCCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 11223333344566677889999999999999999999999999998654
No 103
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=1.1e-40 Score=366.99 Aligned_cols=295 Identities=22% Similarity=0.317 Sum_probs=212.6
Q ss_pred HcCCCCCCcccccCCeeEEEEEe-CCCcEEEEEEeccCChh--hHHHHHHHHHHHHhccCCcccceeeeeec--------
Q 003158 510 TNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQ--GEKEFLTEIQFLSRLHHRNLVSLVGYCDE-------- 578 (843)
Q Consensus 510 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~nIv~l~~~~~~-------- 578 (843)
.++|++.+.||+|+||+||+|.. .+|+.||||++...... ....+.+|+++++.++||||+++++++..
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 95 (351)
T 3mi9_A 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC 95 (351)
T ss_dssp GGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC-------
T ss_pred ccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccC
Confidence 36899999999999999999997 47999999998654322 24578899999999999999999999876
Q ss_pred CCcEEEEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccc
Q 003158 579 EGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGL 658 (843)
Q Consensus 579 ~~~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGl 658 (843)
.+..++||||++ |+|.+.+.... ..+++..++.++.|+++||+|||+++ |+||||||+|||++.++.+||+|||+
T Consensus 96 ~~~~~lv~e~~~-~~l~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~LH~~~---ivH~Dlkp~NIl~~~~~~~kl~Dfg~ 170 (351)
T 3mi9_A 96 KGSIYLVFDFCE-HDLAGLLSNVL-VKFTLSEIKRVMQMLLNGLYYIHRNK---ILHRDMKAANVLITRDGVLKLADFGL 170 (351)
T ss_dssp -CEEEEEEECCS-EEHHHHHHCTT-SCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTT
T ss_pred CceEEEEEeccC-CCHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHHHCC---eeCCCCCHHHEEEcCCCCEEEccchh
Confidence 446899999997 58888775532 35899999999999999999999999 99999999999999999999999999
Q ss_pred cccCCCCCCCCcccceeeeeecccCCccCchhccc-CCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhccc
Q 003158 659 SRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSM 737 (843)
Q Consensus 659 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~ 737 (843)
++........ .........||+.|+|||++.+ ..++.++|||||||++|||++|+.||........ ......
T Consensus 171 a~~~~~~~~~---~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~-~~~i~~--- 243 (351)
T 3mi9_A 171 ARAFSLAKNS---QPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQ-LALISQ--- 243 (351)
T ss_dssp CEECCCCSSS---SCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHHHHH---
T ss_pred cccccccccc---cccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHH-HHHHHH---
Confidence 9876532211 1122344568999999999986 5589999999999999999999999976543221 111100
Q ss_pred chhhccCCCCC-CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCCCCcc
Q 003158 738 MFSVIDGNMGS-YPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSS 816 (843)
Q Consensus 738 ~~~~~~~~~~~-~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~sa~e 816 (843)
........ .+...... . ..-+......++...+.+.... .++.+.+|+.+||+.||++|+|++|
T Consensus 244 ---~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~li~~~L~~dP~~R~t~~e 308 (351)
T 3mi9_A 244 ---LCGSITPEVWPNVDNYE---L-YEKLELVKGQKRKVKDRLKAYV--------RDPYALDLIDKLLVLDPAQRIDSDD 308 (351)
T ss_dssp ---HHCCCCTTTSTTGGGCG---G-GTSSCCCSSCCCCHHHHHHHHH--------CCHHHHHHHHHHSCSSGGGSCCHHH
T ss_pred ---HhCCCChhhccccccch---h-hcccccccccccCHHHHhhhcc--------CChHHHHHHHHHhcCChhhCCCHHH
Confidence 00000000 00000000 0 0001111122222322221111 1334568999999999999999999
Q ss_pred CCCCCcccCCCCCCc
Q 003158 817 MLKHPYVSSDVSGSN 831 (843)
Q Consensus 817 ~L~Hp~f~~~~~~~~ 831 (843)
+|+||||.++...+.
T Consensus 309 ~l~hp~f~~~~~~~~ 323 (351)
T 3mi9_A 309 ALNHDFFWSDPMPSD 323 (351)
T ss_dssp HHTSGGGGSSSCCCC
T ss_pred HhCCCCcCCCCCccc
Confidence 999999988766443
No 104
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=7.1e-41 Score=355.64 Aligned_cols=259 Identities=22% Similarity=0.322 Sum_probs=208.4
Q ss_pred HcCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCChhhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEEec
Q 003158 510 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 588 (843)
Q Consensus 510 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e~ 588 (843)
.++|++.+.||+|+||+||+|... ++..||+|++........+.+.+|+++++.++||||+++++++.+.+..++||||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 87 (277)
T 3f3z_A 8 NQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMEL 87 (277)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred hhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEec
Confidence 567999999999999999999975 5789999999865555677899999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEE---cCCCcEEEeeccccccCCCC
Q 003158 589 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILL---DHKFTAKVADFGLSRLAPVP 665 (843)
Q Consensus 589 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl---~~~~~~kl~DfGla~~~~~~ 665 (843)
+++++|.+++.... .+++..++.++.|+++||+|||+++ |+||||||+||++ +.++.+||+|||++......
T Consensus 88 ~~~~~L~~~~~~~~--~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~ 162 (277)
T 3f3z_A 88 CTGGELFERVVHKR--VFRESDAARIMKDVLSAVAYCHKLN---VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPG 162 (277)
T ss_dssp CCSCBHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTT
T ss_pred cCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCCCHHHEEEecCCCCCcEEEEecccceeccCc
Confidence 99999999987653 4889999999999999999999999 9999999999999 78899999999999865432
Q ss_pred CCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhccCC
Q 003158 666 DIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGN 745 (843)
Q Consensus 666 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 745 (843)
. ......||+.|+|||.+.+. ++.++|||||||++|||++|+.||........ ... +..+
T Consensus 163 ~--------~~~~~~~t~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~-~~~---------~~~~- 222 (277)
T 3f3z_A 163 K--------MMRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPTDSEV-MLK---------IREG- 222 (277)
T ss_dssp S--------CBCCCCSCTTTCCHHHHTTC-BCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHH---------HHHC-
T ss_pred c--------chhccCCCCCccChHHhccc-CCchhhehhHHHHHHHHHHCCCCCCCCCHHHH-HHH---------HHhC-
Confidence 1 22344689999999998654 89999999999999999999999976443111 100 0000
Q ss_pred CCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCCCCccCCCCCcccC
Q 003158 746 MGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSS 825 (843)
Q Consensus 746 ~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~sa~e~L~Hp~f~~ 825 (843)
....+.... ...++...+++.+||..||++|||+.|+|+||||+.
T Consensus 223 ~~~~~~~~~-----------------------------------~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~ 267 (277)
T 3f3z_A 223 TFTFPEKDW-----------------------------------LNVSPQAESLIRRLLTKSPKQRITSLQALEHEWFEK 267 (277)
T ss_dssp CCCCCHHHH-----------------------------------TTSCHHHHHHHHHHTCSSTTTSCCHHHHTTSHHHHH
T ss_pred CCCCCchhh-----------------------------------hcCCHHHHHHHHHHccCChhhCcCHHHHhcCHHHhc
Confidence 001111100 011223346788899999999999999999999976
Q ss_pred CCC
Q 003158 826 DVS 828 (843)
Q Consensus 826 ~~~ 828 (843)
...
T Consensus 268 ~~~ 270 (277)
T 3f3z_A 268 QLS 270 (277)
T ss_dssp HHC
T ss_pred ccc
Confidence 443
No 105
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=7.2e-41 Score=361.92 Aligned_cols=286 Identities=23% Similarity=0.333 Sum_probs=209.1
Q ss_pred cCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCChh--hHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEEe
Q 003158 511 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ--GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 587 (843)
Q Consensus 511 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e 587 (843)
++|++.+.||+|+||+||+|... +|+.||||++...... ..+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (311)
T 4agu_A 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFE 82 (311)
T ss_dssp CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEE
Confidence 57899999999999999999975 5899999998654332 34678899999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCC
Q 003158 588 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 667 (843)
Q Consensus 588 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~ 667 (843)
|+++++|.+++... ..+++..+..++.|+++||+|||+++ |+||||||+||+++.++.+||+|||++.......
T Consensus 83 ~~~~~~l~~~~~~~--~~~~~~~~~~i~~~l~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~- 156 (311)
T 4agu_A 83 YCDHTVLHELDRYQ--RGVPEHLVKSITWQTLQAVNFCHKHN---CIHRDVKPENILITKHSVIKLCDFGFARLLTGPS- 156 (311)
T ss_dssp CCSEEHHHHHHHTS--SCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECC----
T ss_pred eCCCchHHHHHhhh--cCCCHHHHHHHHHHHHHHHHHHHHCC---CcCCCCChhhEEEcCCCCEEEeeCCCchhccCcc-
Confidence 99999999988654 34889999999999999999999999 9999999999999999999999999998754221
Q ss_pred CCcccceeeeeecccCCccCchhccc-CCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhccCCC
Q 003158 668 EGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNM 746 (843)
Q Consensus 668 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 746 (843)
.......||+.|+|||++.+ ..++.++|||||||++|||++|+.||............. ...
T Consensus 157 ------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~-------~~~---- 219 (311)
T 4agu_A 157 ------DYYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIR-------KTL---- 219 (311)
T ss_dssp ---------------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHH-------HHH----
T ss_pred ------cccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH-------HHh----
Confidence 12234568999999999986 678999999999999999999999997655432211110 000
Q ss_pred CCCCHHHHHHHHH--HHHHhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCCCCccCCCCCccc
Q 003158 747 GSYPSECVEKFIK--LALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVS 824 (843)
Q Consensus 747 ~~~~~~~~~~l~~--l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~sa~e~L~Hp~f~ 824 (843)
..........+.. ........+|....... ...+..+..+.+|+.+||..||++|||++|+|+||||+
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~ 289 (311)
T 4agu_A 220 GDLIPRHQQVFSTNQYFSGVKIPDPEDMEPLE----------LKFPNISYPALGLLKGCLHMDPTERLTCEQLLHHPYFE 289 (311)
T ss_dssp CSCCHHHHHHHHTCGGGTTCCCCCCSSCCCHH----------HHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTSGGGT
T ss_pred cccccccccccccccccccCcCCCccccchhh----------hhcccccHHHHHHHHHHccCChhhcCCHHHHhcChHHH
Confidence 0111111111000 00000011111111111 12233444456899999999999999999999999998
Q ss_pred CCCCC
Q 003158 825 SDVSG 829 (843)
Q Consensus 825 ~~~~~ 829 (843)
+-..-
T Consensus 290 ~~~~~ 294 (311)
T 4agu_A 290 NIREI 294 (311)
T ss_dssp TCC--
T ss_pred hccCH
Confidence 75543
No 106
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=4.3e-41 Score=380.52 Aligned_cols=294 Identities=24% Similarity=0.333 Sum_probs=207.7
Q ss_pred HcCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccC--ChhhHHHHHHHHHHHHhccCCcccceeeeeecC-----Cc
Q 003158 510 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEG--SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE-----GE 581 (843)
Q Consensus 510 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~-----~~ 581 (843)
.++|++.+.||+|+||.||+|... +++.||||++... .....+++.+|+++++.++||||+++++++... ..
T Consensus 25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~ 104 (432)
T 3n9x_A 25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDE 104 (432)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCe
Confidence 468999999999999999999965 6899999999753 233457889999999999999999999999765 57
Q ss_pred EEEEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeecccccc
Q 003158 582 QMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRL 661 (843)
Q Consensus 582 ~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~ 661 (843)
.++||||++ |+|.+++... ..+++..++.++.||++||+|||+.+ |+||||||+|||++.++.+||+|||+|+.
T Consensus 105 ~~lv~e~~~-~~L~~~~~~~--~~l~~~~~~~i~~qil~aL~~LH~~g---ivHrDlkp~NILl~~~~~~kL~DFGla~~ 178 (432)
T 3n9x_A 105 LYIVLEIAD-SDLKKLFKTP--IFLTEEHIKTILYNLLLGENFIHESG---IIHRDLKPANCLLNQDCSVKVCDFGLART 178 (432)
T ss_dssp EEEEEECCS-EEHHHHHHSS--CCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred EEEEEecCC-cCHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHCC---CCCCCCCHHHeEECCCCCEEEccCCCccc
Confidence 899999995 6999999653 45899999999999999999999999 99999999999999999999999999987
Q ss_pred CCCCCCCCcc---------------cceeeeeecccCCccCchhc-ccCCCCchhhhHHHHHHHHHHHhCCCCCCCC---
Q 003158 662 APVPDIEGIV---------------PAHVSTVVKGTPGYLDPEYF-LTHKLTDKSDVYSLGVVFLELLTGMQPISHG--- 722 (843)
Q Consensus 662 ~~~~~~~~~~---------------~~~~~~~~~gt~~y~aPE~~-~~~~~~~~sDvwS~G~~l~elltg~~pf~~~--- 722 (843)
.......... .....+...||+.|+|||++ ....++.++||||+||++|||++|..||...
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~ 258 (432)
T 3n9x_A 179 INSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHINDPTN 258 (432)
T ss_dssp C-------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTCSSGGG
T ss_pred ccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhccccccccccc
Confidence 6533211000 00123566799999999987 4567999999999999999999865555321
Q ss_pred -------cch-----------------HHHHHHHhhcccchhhccCCCCCCCHHHHHHH-HHHHHHhcccCCCCCCCHHH
Q 003158 723 -------KNI-----------------VREVNIAYQSSMMFSVIDGNMGSYPSECVEKF-IKLALKCCQDETDARPSMSE 777 (843)
Q Consensus 723 -------~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~l~~~c~~~~p~~RPs~~~ 777 (843)
.+. .+++.. +..+ .+..+.+....+ ..-+...+...|...+..
T Consensus 259 ~~p~f~g~~~~~~~~~~~~~~~~~~~~~~ql~~------i~~~----~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 326 (432)
T 3n9x_A 259 RFPLFPGSSCFPLSPDRNSKKVHEKSNRDQLNI------IFNI----IGTPTEDDLKNINKPEVIKYIKLFPHRKPIN-- 326 (432)
T ss_dssp CCCSCCCSCSCC----------CHHHHHHHHHH------HHHH----HCSCCHHHHHTCCCHHHHHHHHTSCCCCCCC--
T ss_pred ccccCCCccccccCcccccccccccchHHHHHH------HHHh----cCCCCHHHHHhccCHHHHHHHHhCCCCCCCC--
Confidence 110 000000 0000 111111111100 000001111111111100
Q ss_pred HHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCCCCccCCCCCcccCCCC
Q 003158 778 VMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSSDVS 828 (843)
Q Consensus 778 vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~sa~e~L~Hp~f~~~~~ 828 (843)
+...++..++.+.+||++||++||++|+||+|+|+||||++...
T Consensus 327 -------~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~~~ 370 (432)
T 3n9x_A 327 -------LKQKYPSISDDGINLLESMLKFNPNKRITIDQALDHPYLKDVRK 370 (432)
T ss_dssp -------HHHHSTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTCGGGTTTCC
T ss_pred -------HHHHCCCCCHHHHHHHHHHhcCCcccCCCHHHHhcChhhhhccC
Confidence 11123445566778999999999999999999999999987544
No 107
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=5.1e-41 Score=365.57 Aligned_cols=258 Identities=26% Similarity=0.430 Sum_probs=207.5
Q ss_pred HcCCCCCCcccccCCeeEEEEEeC-CCcE----EEEEEeccCC-hhhHHHHHHHHHHHHhccCCcccceeeeeecCCcEE
Q 003158 510 TNNFNSSTQIGQGGYGKVYKGILP-DGTV----VAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQM 583 (843)
Q Consensus 510 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~----vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~ 583 (843)
.++|++.+.||+|+||+||+|.+. +++. ||+|.+.... ....+.+.+|+.+++.++||||+++++++. ++..+
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~ 90 (325)
T 3kex_A 12 ETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQ 90 (325)
T ss_dssp TTTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEE
T ss_pred HhHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccE
Confidence 357888999999999999999964 4443 8888875432 222356788999999999999999999986 56789
Q ss_pred EEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCC
Q 003158 584 LVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAP 663 (843)
Q Consensus 584 lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~ 663 (843)
+||||+++|+|.+++... ...+++..++.++.|+++||+|||+++ |+||||||+|||++.++.+||+|||+++...
T Consensus 91 ~v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~ 166 (325)
T 3kex_A 91 LVTQYLPLGSLLDHVRQH-RGALGPQLLLNWGVQIAKGMYYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLP 166 (325)
T ss_dssp EEEECCTTCBSHHHHHSS-GGGSCTTHHHHHHHHHHHHHHHHHHTT---CCCSCCSSTTEEESSSSCEEECSCSGGGGSC
T ss_pred EEEEeCCCCCHHHHHHHc-cccCCHHHHHHHHHHHHHHHHHHHhCC---CCCCccchheEEECCCCeEEECCCCcccccC
Confidence 999999999999999654 346889999999999999999999999 9999999999999999999999999998765
Q ss_pred CCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHh-CCCCCCCCcchHHHHHHHhhcccchhhc
Q 003158 664 VPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVI 742 (843)
Q Consensus 664 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 742 (843)
.... ........|+..|+|||++.+..++.++|||||||++|||++ |+.||.......- .. .+.
T Consensus 167 ~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~-~~---------~~~ 231 (325)
T 3kex_A 167 PDDK-----QLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEV-PD---------LLE 231 (325)
T ss_dssp CCTT-----CCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTHH-HH---------HHH
T ss_pred cccc-----cccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHHH-HH---------HHH
Confidence 4321 122344568889999999999999999999999999999999 9999976442211 11 111
Q ss_pred cCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhh
Q 003158 743 DGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWN 787 (843)
Q Consensus 743 ~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~ 787 (843)
.+.....+..++..+.+++.+||+.+|.+||++.++++.|+.+..
T Consensus 232 ~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~ 276 (325)
T 3kex_A 232 KGERLAQPQICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMAR 276 (325)
T ss_dssp TTCBCCCCTTBCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTT
T ss_pred cCCCCCCCCcCcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 222233455566778899999999999999999999999998743
No 108
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=7.6e-41 Score=364.50 Aligned_cols=258 Identities=26% Similarity=0.434 Sum_probs=206.1
Q ss_pred HcCCCCCCcccccCCeeEEEEEeC-CCc----EEEEEEeccCC-hhhHHHHHHHHHHHHhccCCcccceeeeeecCCcEE
Q 003158 510 TNNFNSSTQIGQGGYGKVYKGILP-DGT----VVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQM 583 (843)
Q Consensus 510 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~----~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~ 583 (843)
.++|++.+.||+|+||+||+|.+. +++ .||+|.+.... ....+++.+|++++++++||||++++++|.+. ..+
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-~~~ 92 (327)
T 3poz_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQ 92 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESS-SEE
T ss_pred HHHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecC-CeE
Confidence 457888999999999999999964 444 36888876432 33457899999999999999999999999875 478
Q ss_pred EEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCC
Q 003158 584 LVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAP 663 (843)
Q Consensus 584 lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~ 663 (843)
+|+||+++|+|.+++.... ..+++..++.++.||++||+|||+++ |+||||||+|||++.++.+||+|||+|+...
T Consensus 93 ~v~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~LH~~~---ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~ 168 (327)
T 3poz_A 93 LITQLMPFGCLLDYVREHK-DNIGSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLG 168 (327)
T ss_dssp EEEECCTTCBHHHHHHHST-TSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEEETTEEEECCTTHHHHHT
T ss_pred EEEEecCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHhhCC---eeCCCCChheEEECCCCCEEEccCcceeEcc
Confidence 9999999999999997643 45899999999999999999999999 9999999999999999999999999998764
Q ss_pred CCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHh-CCCCCCCCcchHHHHHHHhhcccchhhc
Q 003158 664 VPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVI 742 (843)
Q Consensus 664 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 742 (843)
.... ........+|+.|+|||++.+..++.++|||||||++|||++ |+.||.......- . ..+.
T Consensus 169 ~~~~-----~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~--~--------~~~~ 233 (327)
T 3poz_A 169 AEEK-----EYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI--S--------SILE 233 (327)
T ss_dssp TTCC------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGH--H--------HHHH
T ss_pred CCcc-----cccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHHH--H--------HHHH
Confidence 3321 112233457889999999999999999999999999999999 9999975442111 0 1111
Q ss_pred cCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhh
Q 003158 743 DGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWN 787 (843)
Q Consensus 743 ~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~ 787 (843)
.+.....+..++..+.+++.+||+.+|.+||++.++++.|+.+..
T Consensus 234 ~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~ 278 (327)
T 3poz_A 234 KGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR 278 (327)
T ss_dssp TTCCCCCCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHHT
T ss_pred cCCCCCCCccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence 222334566677889999999999999999999999999998754
No 109
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=1.9e-40 Score=361.73 Aligned_cols=279 Identities=18% Similarity=0.321 Sum_probs=210.7
Q ss_pred cCCCCCCcccccCCeeEEEEEe-CCCcEEEEEEeccCChhhHHHHHHHHHHHHhcc-CCcccceeeeeec--CCcEEEEE
Q 003158 511 NNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLH-HRNLVSLVGYCDE--EGEQMLVY 586 (843)
Q Consensus 511 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~nIv~l~~~~~~--~~~~~lV~ 586 (843)
++|++.+.||+|+||+||+|.. .+++.||||++... ..+.+.+|+++++.++ ||||+++++++.+ ....++||
T Consensus 36 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~ 112 (330)
T 3nsz_A 36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV---KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVF 112 (330)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC---CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEE
T ss_pred CceEEEEEecccCCeEEEEEEECCCCcEEEEEEeccc---chHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEE
Confidence 6799999999999999999986 57899999999743 3467899999999997 9999999999987 66889999
Q ss_pred ecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCC-cEEEeeccccccCCCC
Q 003158 587 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKF-TAKVADFGLSRLAPVP 665 (843)
Q Consensus 587 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~-~~kl~DfGla~~~~~~ 665 (843)
||+++++|.+++.. +++..++.++.|+++||+|||+++ |+||||||+|||++.++ .+||+|||+++.....
T Consensus 113 e~~~~~~l~~~~~~-----~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~ 184 (330)
T 3nsz_A 113 EHVNNTDFKQLYQT-----LTDYDIRFYMYEILKALDYCHSMG---IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPG 184 (330)
T ss_dssp ECCCCCCHHHHGGG-----CCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEETTTTEEEECCCTTCEECCTT
T ss_pred eccCchhHHHHHHh-----CCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCCC
Confidence 99999999999843 788899999999999999999999 99999999999999777 8999999999865432
Q ss_pred CCCCcccceeeeeecccCCccCchhccc-CCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhccC
Q 003158 666 DIEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDG 744 (843)
Q Consensus 666 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 744 (843)
. ......|+..|+|||++.+ ..++.++|||||||++|||++|+.||.......+..........
T Consensus 185 ~--------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~------- 249 (330)
T 3nsz_A 185 Q--------EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLG------- 249 (330)
T ss_dssp C--------CCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHC-------
T ss_pred C--------ccccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcC-------
Confidence 2 1234468899999999987 67899999999999999999999999776554443332211100
Q ss_pred CCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH--HhhhhCC-----CCCCCCCccccCCCCCCCCCCCCCccC
Q 003158 745 NMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELE--SIWNMMP-----ESDTKTPEFINSEHTSKEETPPSSSSM 817 (843)
Q Consensus 745 ~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~--~~~~~~~-----~~~~~~~dll~~~L~~dp~~R~sa~e~ 817 (843)
...+.+.+.. ......|...+...... .+....+ ..++.+.+||.+||.+||++||||+|+
T Consensus 250 ---------~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~ 317 (330)
T 3nsz_A 250 ---------TEDLYDYIDK---YNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREA 317 (330)
T ss_dssp ---------HHHHHHHHHH---TTCCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHH
T ss_pred ---------CchhhhHHHH---hccccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHH
Confidence 0111111111 11112222222110000 0000000 123345679999999999999999999
Q ss_pred CCCCcccCCC
Q 003158 818 LKHPYVSSDV 827 (843)
Q Consensus 818 L~Hp~f~~~~ 827 (843)
|+||||++..
T Consensus 318 l~hp~f~~~~ 327 (330)
T 3nsz_A 318 MEHPYFYTVV 327 (330)
T ss_dssp HTSGGGTTCC
T ss_pred hcCccHhhhc
Confidence 9999998753
No 110
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=2.4e-40 Score=350.36 Aligned_cols=253 Identities=32% Similarity=0.511 Sum_probs=201.8
Q ss_pred HcCCCCCCcccccCCeeEEEEEeCCCcEEEEEEeccCCh----hhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEE
Q 003158 510 TNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSL----QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLV 585 (843)
Q Consensus 510 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~----~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV 585 (843)
.++|++.+.||+|+||.||+|.+. ++.||||++..... ...+.+.+|+++++.++||||+++++++.+.+..++|
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 84 (271)
T 3dtc_A 6 FAELTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLV 84 (271)
T ss_dssp TTSEEEEEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEE
T ss_pred hhheeeeeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEE
Confidence 357888999999999999999974 88999999875332 2246789999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcC--------CCcEEEeecc
Q 003158 586 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDH--------KFTAKVADFG 657 (843)
Q Consensus 586 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~--------~~~~kl~DfG 657 (843)
|||+++++|.+++.. ..+++..++.++.|+++||+|||+++..+|+||||||+||+++. ++.+||+|||
T Consensus 85 ~e~~~~~~L~~~~~~---~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg 161 (271)
T 3dtc_A 85 MEFARGGPLNRVLSG---KRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFG 161 (271)
T ss_dssp EECCTTEEHHHHHTS---SCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCC
T ss_pred EEcCCCCCHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccCC
Confidence 999999999999853 35889999999999999999999998666899999999999986 7789999999
Q ss_pred ccccCCCCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhccc
Q 003158 658 LSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSM 737 (843)
Q Consensus 658 la~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~ 737 (843)
+++..... ......||+.|+|||.+.+..++.++|||||||++|||++|+.||............
T Consensus 162 ~~~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~------ 226 (271)
T 3dtc_A 162 LAREWHRT---------TKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGV------ 226 (271)
T ss_dssp C----------------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHH------
T ss_pred cccccccc---------cccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHhh------
Confidence 99865422 122346899999999999999999999999999999999999999765432221111
Q ss_pred chhhccCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 003158 738 MFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELES 784 (843)
Q Consensus 738 ~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~ 784 (843)
.........+..+++.+.+++.+||+.+|.+||++.++++.|+.
T Consensus 227 ---~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~ 270 (271)
T 3dtc_A 227 ---AMNKLALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTT 270 (271)
T ss_dssp ---HTSCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC
T ss_pred ---hcCCCCCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhc
Confidence 11112234456677889999999999999999999999999875
No 111
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=1.1e-40 Score=362.31 Aligned_cols=259 Identities=24% Similarity=0.345 Sum_probs=209.7
Q ss_pred HcCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCChh------hHHHHHHHHHHHHhccCCcccceeeeeecCCcE
Q 003158 510 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ------GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQ 582 (843)
Q Consensus 510 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~ 582 (843)
.++|++.+.||+|+||.||+|... +|+.||+|++...... ..+++.+|+++++.++||||+++++++.+.+..
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 90 (321)
T 2a2a_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDV 90 (321)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred hccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEE
Confidence 567999999999999999999975 6899999998754322 356799999999999999999999999999999
Q ss_pred EEEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCC----cEEEeeccc
Q 003158 583 MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKF----TAKVADFGL 658 (843)
Q Consensus 583 ~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~----~~kl~DfGl 658 (843)
++||||+++++|.+++... ..+++..++.++.|+++||+|||+.+ |+||||||+||+++.++ .+||+|||+
T Consensus 91 ~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~aL~~lH~~~---ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~ 165 (321)
T 2a2a_A 91 VLILELVSGGELFDFLAQK--ESLSEEEATSFIKQILDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGL 165 (321)
T ss_dssp EEEECCCCSCBHHHHHHTC--SCEEHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESCTTSSSCCEEECCCTT
T ss_pred EEEEEcCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCChHHEEEecCCCCcCCEEEccCcc
Confidence 9999999999999999653 45899999999999999999999999 99999999999999888 799999999
Q ss_pred cccCCCCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccc
Q 003158 659 SRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMM 738 (843)
Q Consensus 659 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~ 738 (843)
+....... ......||+.|+|||++.+..++.++|||||||++|||++|+.||...... +....
T Consensus 166 ~~~~~~~~--------~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-~~~~~------- 229 (321)
T 2a2a_A 166 AHEIEDGV--------EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ-ETLAN------- 229 (321)
T ss_dssp CEECCTTC--------CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHH-HHHHH-------
T ss_pred ceecCccc--------cccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHH-HHHHH-------
Confidence 98654321 123446899999999999999999999999999999999999999754321 11110
Q ss_pred hhhccCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCCCCccCC
Q 003158 739 FSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSML 818 (843)
Q Consensus 739 ~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~sa~e~L 818 (843)
+.. ....++... .+..+..+.+++.+||..||++|||++|++
T Consensus 230 --i~~-~~~~~~~~~-----------------------------------~~~~~~~~~~li~~~l~~dp~~Rps~~e~l 271 (321)
T 2a2a_A 230 --ITS-VSYDFDEEF-----------------------------------FSHTSELAKDFIRKLLVKETRKRLTIQEAL 271 (321)
T ss_dssp --HHT-TCCCCCHHH-----------------------------------HTTCCHHHHHHHHTTSCSSTTTSCCHHHHH
T ss_pred --HHh-cccccChhh-----------------------------------hcccCHHHHHHHHHHcCCChhhCcCHHHHh
Confidence 000 000111110 011222344789999999999999999999
Q ss_pred CCCcccCCC
Q 003158 819 KHPYVSSDV 827 (843)
Q Consensus 819 ~Hp~f~~~~ 827 (843)
+||||+...
T Consensus 272 ~hp~~~~~~ 280 (321)
T 2a2a_A 272 RHPWITPVD 280 (321)
T ss_dssp HSTTTSCSS
T ss_pred cCccccCCC
Confidence 999997643
No 112
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=3.8e-40 Score=356.49 Aligned_cols=265 Identities=25% Similarity=0.398 Sum_probs=218.8
Q ss_pred HHHcCCCCCCcccccCCeeEEEEEe------CCCcEEEEEEeccCCh-hhHHHHHHHHHHHHhc-cCCcccceeeeeecC
Q 003158 508 LATNNFNSSTQIGQGGYGKVYKGIL------PDGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEE 579 (843)
Q Consensus 508 ~~~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~ 579 (843)
...++|++.+.||+|+||+||+|.+ .+++.||||++..... ...+.+.+|+++++++ +||||+++++++.+.
T Consensus 20 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~ 99 (313)
T 1t46_A 20 FPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIG 99 (313)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred cChhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecC
Confidence 3457899999999999999999984 2468999999986443 3457789999999999 999999999999999
Q ss_pred CcEEEEEecCCCCCHHHHHhhcCC----------------CCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcE
Q 003158 580 GEQMLVYEFMSNGTLRDQLSAKSK----------------EPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNI 643 (843)
Q Consensus 580 ~~~~lV~e~~~~gsL~~~l~~~~~----------------~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NI 643 (843)
+..++||||+++|+|.+++..... ..+++..++.++.|+++||+|||+++ |+||||||+||
T Consensus 100 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Ni 176 (313)
T 1t46_A 100 GPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKN---CIHRDLAARNI 176 (313)
T ss_dssp SSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGE
T ss_pred CCcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCccceE
Confidence 999999999999999999976542 25899999999999999999999999 99999999999
Q ss_pred EEcCCCcEEEeeccccccCCCCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHh-CCCCCCCC
Q 003158 644 LLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHG 722 (843)
Q Consensus 644 Ll~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~ellt-g~~pf~~~ 722 (843)
+++.++.+||+|||+++....... ........+|+.|+|||.+.+..++.++|||||||++|||++ |+.||...
T Consensus 177 l~~~~~~~kl~Dfg~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~ 251 (313)
T 1t46_A 177 LLTHGRITKICDFGLARDIKNDSN-----YVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGM 251 (313)
T ss_dssp EEETTTEEEECCCGGGSCTTSCTT-----SEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTC
T ss_pred EEcCCCCEEEcccccccccccccc-----ceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcc
Confidence 999999999999999987653321 112233457889999999999999999999999999999999 99999765
Q ss_pred cchHHHHHHHhhcccchhhccCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhC
Q 003158 723 KNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMM 789 (843)
Q Consensus 723 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~ 789 (843)
.......... . .......+..++..+.+++.+||+.+|.+||++.++++.|+++....
T Consensus 252 ~~~~~~~~~~-~--------~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~ 309 (313)
T 1t46_A 252 PVDSKFYKMI-K--------EGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISES 309 (313)
T ss_dssp CSSHHHHHHH-H--------HTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHT
T ss_pred cchhHHHHHh-c--------cCCCCCCcccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHh
Confidence 4322211111 1 11122234556788999999999999999999999999999987654
No 113
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=9.7e-41 Score=360.94 Aligned_cols=252 Identities=23% Similarity=0.337 Sum_probs=197.8
Q ss_pred HHcCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCC--hhhHHHHHHHHHHHHhc-cCCcccceeeeeecCCcEEE
Q 003158 509 ATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQML 584 (843)
Q Consensus 509 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~l 584 (843)
..++|++.++||+|+||+||+|... +++.||||++.... .....+...|+..+..+ +||||++++++|.+.+..++
T Consensus 55 ~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~l 134 (311)
T 3p1a_A 55 FQQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYL 134 (311)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred hhhheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEE
Confidence 3468999999999999999999976 79999999986532 23334556666666555 89999999999999999999
Q ss_pred EEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCC
Q 003158 585 VYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPV 664 (843)
Q Consensus 585 V~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~ 664 (843)
||||+ +++|.+++.... ..+++..++.++.|++.||+|||+++ |+||||||+|||++.++.+||+|||++.....
T Consensus 135 v~e~~-~~~L~~~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~ 209 (311)
T 3p1a_A 135 QTELC-GPSLQQHCEAWG-ASLPEAQVWGYLRDTLLALAHLHSQG---LVHLDVKPANIFLGPRGRCKLGDFGLLVELGT 209 (311)
T ss_dssp EEECC-CCBHHHHHHHHC-SCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECGGGCEEECCCTTCEECC-
T ss_pred EEecc-CCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCCHHHEEECCCCCEEEccceeeeeccc
Confidence 99999 779999987653 46899999999999999999999999 99999999999999999999999999976543
Q ss_pred CCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhccC
Q 003158 665 PDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDG 744 (843)
Q Consensus 665 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 744 (843)
. .......||+.|+|||++.+ .++.++|||||||++|||++|..|+...... . .+..+
T Consensus 210 ~--------~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~~~-~------------~~~~~ 267 (311)
T 3p1a_A 210 A--------GAGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGEGW-Q------------QLRQG 267 (311)
T ss_dssp -------------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHHHH-H------------HHTTT
T ss_pred C--------CCCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCccHH-H------------HHhcc
Confidence 2 12234568999999999876 7899999999999999999997776542211 0 00000
Q ss_pred CCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCCCCccCCCCCccc
Q 003158 745 NMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVS 824 (843)
Q Consensus 745 ~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~sa~e~L~Hp~f~ 824 (843)
..+.+.. +..+..+.+++.+||..||++|||++|+|+||||+
T Consensus 268 ---~~~~~~~-----------------------------------~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp~~~ 309 (311)
T 3p1a_A 268 ---YLPPEFT-----------------------------------AGLSSELRSVLVMMLEPDPKLRATAEALLALPVLR 309 (311)
T ss_dssp ---CCCHHHH-----------------------------------TTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGS
T ss_pred ---CCCcccc-----------------------------------cCCCHHHHHHHHHHcCCChhhCcCHHHHHhCcccc
Confidence 0111100 11122334688889999999999999999999997
Q ss_pred C
Q 003158 825 S 825 (843)
Q Consensus 825 ~ 825 (843)
.
T Consensus 310 ~ 310 (311)
T 3p1a_A 310 Q 310 (311)
T ss_dssp C
T ss_pred C
Confidence 5
No 114
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=2.1e-40 Score=350.49 Aligned_cols=254 Identities=20% Similarity=0.345 Sum_probs=212.3
Q ss_pred HcCCCCCCcccccCCeeEEEEEeCCCcEEEEEEeccCC--hhhHHHHHHHHHHHHhccCCcccceeeeeecC--CcEEEE
Q 003158 510 TNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE--GEQMLV 585 (843)
Q Consensus 510 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~--~~~~lV 585 (843)
.++|++.+.||+|+||+||+|.+. ++.||||++.... ....+.+.+|++++++++||||+++++++.+. +..++|
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv 87 (271)
T 3kmu_A 9 FKQLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLI 87 (271)
T ss_dssp GGGCEEEEEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEE
T ss_pred HHHhHHHHHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEee
Confidence 357888999999999999999984 8899999997543 33456799999999999999999999999876 788999
Q ss_pred EecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCC
Q 003158 586 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVP 665 (843)
Q Consensus 586 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~ 665 (843)
|||+++|+|.+++.......+++..++.++.|+++||+|||+++ ++|+||||||+||+++.++.++|+|||++.....
T Consensus 88 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~-~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~~- 165 (271)
T 3kmu_A 88 THWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLE-PLIPRHALNSRSVMIDEDMTARISMADVKFSFQS- 165 (271)
T ss_dssp EECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTSS-SCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTSC-
T ss_pred ecccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCC-CceecCCCccceEEEcCCcceeEEeccceeeecc-
Confidence 99999999999998766667999999999999999999999875 4599999999999999999999999998764321
Q ss_pred CCCCcccceeeeeecccCCccCchhcccCCCCc---hhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhc
Q 003158 666 DIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTD---KSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVI 742 (843)
Q Consensus 666 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~---~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 742 (843)
....||+.|+|||.+.+..++. ++|||||||++|||++|+.||........... ...
T Consensus 166 -----------~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~---------~~~ 225 (271)
T 3kmu_A 166 -----------PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMK---------VAL 225 (271)
T ss_dssp -----------TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHHHHH---------HHH
T ss_pred -----------cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHHHHH---------HHh
Confidence 2235789999999998765544 79999999999999999999976543222111 111
Q ss_pred cCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhh
Q 003158 743 DGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIW 786 (843)
Q Consensus 743 ~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~ 786 (843)
.+.....+..++..+.+++..||+.+|.+||++.++++.|+.+.
T Consensus 226 ~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~L~~l~ 269 (271)
T 3kmu_A 226 EGLRPTIPPGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQ 269 (271)
T ss_dssp SCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC
T ss_pred cCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhh
Confidence 22233456667788999999999999999999999999999874
No 115
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.8e-40 Score=364.30 Aligned_cols=267 Identities=25% Similarity=0.392 Sum_probs=215.6
Q ss_pred HHHHHcCCCCCCcccccCCeeEEEEEe------CCCcEEEEEEeccCCh-hhHHHHHHHHHHHHhc-cCCcccceeeeee
Q 003158 506 MALATNNFNSSTQIGQGGYGKVYKGIL------PDGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRL-HHRNLVSLVGYCD 577 (843)
Q Consensus 506 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~ 577 (843)
+....++|++.+.||+|+||+||+|.. .+++.||||++..... ...+.+.+|+++++++ +||||+++++++.
T Consensus 40 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~ 119 (344)
T 1rjb_A 40 WEFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACT 119 (344)
T ss_dssp GBCCGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred cccCHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEe
Confidence 444567899999999999999999995 2466899999975432 2346789999999999 8999999999999
Q ss_pred cCCcEEEEEecCCCCCHHHHHhhcCC---------------------CCcchhHHHHHHHHHHHHHHHHhcCCCCCEEec
Q 003158 578 EEGEQMLVYEFMSNGTLRDQLSAKSK---------------------EPLGFAMRLSIALGSSRGILYLHTEADPPVFHR 636 (843)
Q Consensus 578 ~~~~~~lV~e~~~~gsL~~~l~~~~~---------------------~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~ 636 (843)
..+..++||||+++|+|.+++..... ..+++..++.++.||++||+|||+++ |+||
T Consensus 120 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~ 196 (344)
T 1rjb_A 120 LSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKS---CVHR 196 (344)
T ss_dssp SSSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTT---EEET
T ss_pred eCCccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhCC---cccC
Confidence 99999999999999999999976432 24789999999999999999999999 9999
Q ss_pred cCCCCcEEEcCCCcEEEeeccccccCCCCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHh-C
Q 003158 637 DIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-G 715 (843)
Q Consensus 637 Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~ellt-g 715 (843)
||||+||+++.++.+||+|||++........ ........||+.|+|||.+.+..++.++|||||||++|||+| |
T Consensus 197 Dikp~NIll~~~~~~kL~Dfg~~~~~~~~~~-----~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g 271 (344)
T 1rjb_A 197 DLAARNVLVTHGKVVKICDFGLARDIMSDSN-----YVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLG 271 (344)
T ss_dssp TCSGGGEEEETTTEEEECCCGGGSCGGGCTT-----SEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTS
T ss_pred CCChhhEEEcCCCcEEeCCCccCcccccCcc-----ceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCC
Confidence 9999999999999999999999986543221 122334567889999999999999999999999999999998 9
Q ss_pred CCCCCCCcchHHHHHHHhhcccchhhccCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhC
Q 003158 716 MQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMM 789 (843)
Q Consensus 716 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~ 789 (843)
..||............ +..+.....+..+++.+.+++..||+.+|.+||++.++++.|+.+....
T Consensus 272 ~~p~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~ 336 (344)
T 1rjb_A 272 VNPYPGIPVDANFYKL---------IQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLADA 336 (344)
T ss_dssp CCSSTTCCCSHHHHHH---------HHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC---
T ss_pred CCCcccCCcHHHHHHH---------HhcCCCCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHH
Confidence 9999765432221111 1111223345566788999999999999999999999999999876543
No 116
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4.2e-40 Score=359.52 Aligned_cols=276 Identities=27% Similarity=0.437 Sum_probs=213.9
Q ss_pred cCCCCCCcccccCCeeEEEEEeCC-----CcEEEEEEeccCC-hhhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEE
Q 003158 511 NNFNSSTQIGQGGYGKVYKGILPD-----GTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQML 584 (843)
Q Consensus 511 ~~~~~~~~lg~G~~g~Vy~~~~~~-----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~l 584 (843)
++|...+.||+|+||+||+|.... +..||||++.... .....++.+|+++++.++||||+++++++.+.+..++
T Consensus 44 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 123 (333)
T 1mqb_A 44 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMI 123 (333)
T ss_dssp TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcEE
Confidence 467778999999999999998642 2469999997643 3345678999999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCC
Q 003158 585 VYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPV 664 (843)
Q Consensus 585 V~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~ 664 (843)
||||+++|+|.+++... ...+++..++.++.|+++||+|||+++ |+||||||+||++++++.+||+|||+++....
T Consensus 124 v~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~ 199 (333)
T 1mqb_A 124 ITEYMENGALDKFLREK-DGEFSVLQLVGMLRGIAAGMKYLANMN---YVHRDLAARNILVNSNLVCKVSDFGLSRVLED 199 (333)
T ss_dssp EEECCTTEEHHHHHHHT-TTCSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCEEECCCCC------
T ss_pred EEeCCCCCcHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChheEEECCCCcEEECCCCcchhhcc
Confidence 99999999999999764 346889999999999999999999999 99999999999999999999999999987643
Q ss_pred CCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHh-CCCCCCCCcchHHHHHHHhhcccchhhcc
Q 003158 665 PDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVID 743 (843)
Q Consensus 665 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 743 (843)
.... ........+|+.|+|||.+.+..++.++|||||||++|||++ |+.||...... +... .+..
T Consensus 200 ~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~-~~~~---------~~~~ 265 (333)
T 1mqb_A 200 DPEA----TYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNH-EVMK---------AIND 265 (333)
T ss_dssp ---------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH-HHHH---------HHHT
T ss_pred cccc----ccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHH-HHHH---------HHHC
Confidence 2110 111223346788999999999999999999999999999999 99999765431 1111 1222
Q ss_pred CCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCC
Q 003158 744 GNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPP 812 (843)
Q Consensus 744 ~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~ 812 (843)
+.....+..++..+.+++.+||+.+|.+||++.++++.|+.+.... +.+..+..++|..|+
T Consensus 266 ~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~--------~~~~~~~~~~p~~~~ 326 (333)
T 1mqb_A 266 GFRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRAP--------DSLKTLADFDPRVSI 326 (333)
T ss_dssp TCCCCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHSG--------GGGGSBCCC------
T ss_pred CCcCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhcc--------hhhhhhcCCCccchh
Confidence 2233445667788999999999999999999999999999987532 445566777776654
No 117
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=4.4e-41 Score=382.44 Aligned_cols=200 Identities=29% Similarity=0.435 Sum_probs=176.3
Q ss_pred cCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCCh---hhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEE
Q 003158 511 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 586 (843)
Q Consensus 511 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~ 586 (843)
++|.+.+.||+|+||.||+|... +|+.||||++..... ...+.+.+|+++++.++||||+++++++.+.+..++||
T Consensus 16 ~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv~ 95 (476)
T 2y94_A 16 GHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVM 95 (476)
T ss_dssp TTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence 57888999999999999999975 799999999975322 22467899999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCC
Q 003158 587 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 666 (843)
Q Consensus 587 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~ 666 (843)
||+++|+|.+++... ..+++..++.++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++......
T Consensus 96 E~~~gg~L~~~l~~~--~~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~~ 170 (476)
T 2y94_A 96 EYVSGGELFDYICKN--GRLDEKESRRLFQQILSGVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE 170 (476)
T ss_dssp ECCSSEEHHHHTTSS--SSCCHHHHHHHHHHHHHHHHHHHTTT---EECSCCSGGGEEECTTCCEEECCCSSCEECCTTC
T ss_pred eCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC---CCcccccHHHEEEecCCCeEEEeccchhhccccc
Confidence 999999999999653 45899999999999999999999999 9999999999999999999999999998754321
Q ss_pred CCCcccceeeeeecccCCccCchhcccCCC-CchhhhHHHHHHHHHHHhCCCCCCCCc
Q 003158 667 IEGIVPAHVSTVVKGTPGYLDPEYFLTHKL-TDKSDVYSLGVVFLELLTGMQPISHGK 723 (843)
Q Consensus 667 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwS~G~~l~elltg~~pf~~~~ 723 (843)
......||+.|+|||++.+..+ +.++||||+||++|||++|+.||....
T Consensus 171 --------~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~ 220 (476)
T 2y94_A 171 --------FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDH 220 (476)
T ss_dssp --------CBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred --------cccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCC
Confidence 2234569999999999998765 689999999999999999999997543
No 118
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=4.5e-40 Score=358.90 Aligned_cols=272 Identities=17% Similarity=0.233 Sum_probs=215.9
Q ss_pred HcCCCCCCcccccCCeeEEEEEe-CCCcEEEEEEeccCChhhHHHHHHHHHHHHhc-cCCcccceeeeeecCCcEEEEEe
Q 003158 510 TNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQMLVYE 587 (843)
Q Consensus 510 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~lV~e 587 (843)
.++|++.+.||+|+||+||+|.. .+++.||||++..... .+.+.+|+++++.+ +||||+++++++...+..++|||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e 85 (330)
T 2izr_A 8 GPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR--APQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLE 85 (330)
T ss_dssp TTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS--SCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEE
T ss_pred cCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccc--hHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEE
Confidence 35788999999999999999996 5799999999875432 24688999999999 99999999999999999999999
Q ss_pred cCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCc-----EEEeeccccccC
Q 003158 588 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFT-----AKVADFGLSRLA 662 (843)
Q Consensus 588 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~-----~kl~DfGla~~~ 662 (843)
|+ +++|.+++... ...+++..++.++.|+++||+|||+.+ |+||||||+|||++.++. +||+|||+++..
T Consensus 86 ~~-~~~L~~~~~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~~---iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~ 160 (330)
T 2izr_A 86 LL-GPSLEDLFDLC-DRTFSLKTVLMIAIQLISRMEYVHSKN---LIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEY 160 (330)
T ss_dssp CC-CCBHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECCGGGTCTTSEEECCCTTCEES
T ss_pred eC-CCCHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHeeeccCCCCCCceEEEEEcccceee
Confidence 99 99999999764 346899999999999999999999999 999999999999998887 999999999876
Q ss_pred CCCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCcc--hHHHHHHHhhcccchh
Q 003158 663 PVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKN--IVREVNIAYQSSMMFS 740 (843)
Q Consensus 663 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~--~~~~~~~~~~~~~~~~ 740 (843)
.........+........||+.|+|||++.+..++.++|||||||++|||++|+.||..... ............. ..
T Consensus 161 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~-~~ 239 (330)
T 2izr_A 161 IDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKR-AT 239 (330)
T ss_dssp BCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHHHHHHHHH-HS
T ss_pred ecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccHHHHHHHHHhhhc-cC
Confidence 54332221122223456799999999999999999999999999999999999999976432 2221111100000 00
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCCCCC
Q 003158 741 VIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDT 794 (843)
Q Consensus 741 ~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~ 794 (843)
.. ......++ ++.+++..||+.+|.+||++.++.+.|+++.+.......
T Consensus 240 ~~----~~~~~~~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~~~~~~~~~ 288 (330)
T 2izr_A 240 PI----EVLCENFP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDRKGYMFD 288 (330)
T ss_dssp CH----HHHTTTCH-HHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHTTCCCS
T ss_pred CH----HHHhccCh-HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHcCCCCC
Confidence 00 00011134 899999999999999999999999999998876654333
No 119
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=1.6e-40 Score=354.61 Aligned_cols=257 Identities=24% Similarity=0.361 Sum_probs=200.2
Q ss_pred HcCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCC-hhhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEEe
Q 003158 510 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 587 (843)
Q Consensus 510 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e 587 (843)
.++|.+.+.||+|+||+||+|... +++.||+|++.... ....+.+.+|+++++.++||||+++++++.+.+..++|||
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 100 (285)
T 3is5_A 21 DDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVME 100 (285)
T ss_dssp HHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred hhheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEE
Confidence 467999999999999999999964 68999999987543 2345788999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhc--CCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEE---cCCCcEEEeeccccccC
Q 003158 588 FMSNGTLRDQLSAK--SKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILL---DHKFTAKVADFGLSRLA 662 (843)
Q Consensus 588 ~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl---~~~~~~kl~DfGla~~~ 662 (843)
|+++|+|.+++... ....+++..++.++.|+++||+|||+.+ |+||||||+||++ +.++.+||+|||++...
T Consensus 101 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~ 177 (285)
T 3is5_A 101 TCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQH---VVHKDLKPENILFQDTSPHSPIKIIDFGLAELF 177 (285)
T ss_dssp CCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEESSSSTTCCEEECCCCCCCC-
T ss_pred eCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhCC---EEECCCCHHHEEEecCCCCCCEEEEeeecceec
Confidence 99999999998653 2356899999999999999999999999 9999999999999 45678999999999865
Q ss_pred CCCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhc
Q 003158 663 PVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVI 742 (843)
Q Consensus 663 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 742 (843)
... .......||+.|+|||.+. ..++.++|||||||++|||++|+.||............
T Consensus 178 ~~~--------~~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~~~~~~----------- 237 (285)
T 3is5_A 178 KSD--------EHSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKA----------- 237 (285)
T ss_dssp -----------------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH-----------
T ss_pred CCc--------ccCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCHHHHHhhh-----------
Confidence 432 1223456899999999985 56899999999999999999999999754321110000
Q ss_pred cCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCCCCccCCCCCc
Q 003158 743 DGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPY 822 (843)
Q Consensus 743 ~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~sa~e~L~Hp~ 822 (843)
...........++ ..+.+.+++.+||+.||++|||++|+|+|||
T Consensus 238 ------------------~~~~~~~~~~~~~------------------~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~ 281 (285)
T 3is5_A 238 ------------------TYKEPNYAVECRP------------------LTPQAVDLLKQMLTKDPERRPSAAQVLHHEW 281 (285)
T ss_dssp ------------------HHCCCCCCC--CC------------------CCHHHHHHHHHHTCSCTTTSCCHHHHHTSGG
T ss_pred ------------------ccCCcccccccCc------------------CCHHHHHHHHHHccCChhhCcCHHHHhcCHH
Confidence 0000000000111 1122336788889999999999999999999
Q ss_pred ccC
Q 003158 823 VSS 825 (843)
Q Consensus 823 f~~ 825 (843)
|+.
T Consensus 282 f~~ 284 (285)
T 3is5_A 282 FKQ 284 (285)
T ss_dssp GGC
T ss_pred hhc
Confidence 975
No 120
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=2.6e-40 Score=355.17 Aligned_cols=271 Identities=18% Similarity=0.253 Sum_probs=216.8
Q ss_pred HcCCCCCCcccccCCeeEEEEEe-CCCcEEEEEEeccCChhhHHHHHHHHHHHHhc-cCCcccceeeeeecCCcEEEEEe
Q 003158 510 TNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQMLVYE 587 (843)
Q Consensus 510 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~lV~e 587 (843)
.++|++.+.||+|+||+||+|.. .+++.||||++.... ..+.+.+|+++++.+ +|+|++++++++.+....++|||
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e 86 (298)
T 1csn_A 9 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVID 86 (298)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC--ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEE
Confidence 46799999999999999999996 579999999987533 234678899999999 79999999999999999999999
Q ss_pred cCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCc-----EEEeeccccccC
Q 003158 588 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFT-----AKVADFGLSRLA 662 (843)
Q Consensus 588 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~-----~kl~DfGla~~~ 662 (843)
|+ +++|.+++.... .++++..++.++.||++||+|||+++ |+||||||+||+++.++. +||+|||+++..
T Consensus 87 ~~-~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~ 161 (298)
T 1csn_A 87 LL-GPSLEDLLDLCG-RKFSVKTVAMAAKQMLARVQSIHEKS---LVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFY 161 (298)
T ss_dssp CC-CCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCCGGGEEECCSSSTTTTCEEECCCTTCEES
T ss_pred ec-CCCHHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEeccCCCCCCCeEEEEECcccccc
Confidence 99 999999997643 35899999999999999999999999 999999999999987776 999999999876
Q ss_pred CCCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCcc--hHHHHHHHhhcccchh
Q 003158 663 PVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKN--IVREVNIAYQSSMMFS 740 (843)
Q Consensus 663 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~--~~~~~~~~~~~~~~~~ 740 (843)
.........+........||+.|+|||++.+..++.++|||||||++|||++|+.||..... ........... .
T Consensus 162 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~-~--- 237 (298)
T 1csn_A 162 RDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEK-K--- 237 (298)
T ss_dssp BCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHH-H---
T ss_pred ccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHhh-c---
Confidence 54432222122233456799999999999999999999999999999999999999976432 11111111000 0
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCCC
Q 003158 741 VIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPES 792 (843)
Q Consensus 741 ~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~ 792 (843)
...........+++.+.+++..||+.+|.+||++.++++.|+++.+.....
T Consensus 238 -~~~~~~~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~~~~~~ 288 (298)
T 1csn_A 238 -QSTPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLERLNTT 288 (298)
T ss_dssp -HHSCHHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHTTCC
T ss_pred -cCccHHHHHhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHhcCCC
Confidence 000000112245678999999999999999999999999999998765443
No 121
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=3.6e-40 Score=351.52 Aligned_cols=260 Identities=22% Similarity=0.354 Sum_probs=206.9
Q ss_pred HcCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCC--hhhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEE
Q 003158 510 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 586 (843)
Q Consensus 510 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~ 586 (843)
.++|++.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 84 (284)
T 3kk8_A 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 84 (284)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEE
Confidence 468999999999999999999965 68999999987532 333467889999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCc---EEEeeccccccCC
Q 003158 587 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFT---AKVADFGLSRLAP 663 (843)
Q Consensus 587 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~---~kl~DfGla~~~~ 663 (843)
||+++++|.+++.... .+++..+..++.|++.||+|||+.+ |+||||||+||+++.++. +||+|||++....
T Consensus 85 e~~~~~~l~~~~~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~ 159 (284)
T 3kk8_A 85 DLVTGGELFEDIVARE--FYSEADASHCIQQILESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN 159 (284)
T ss_dssp CCCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEESSSSTTCCEEECCCTTCEECC
T ss_pred ecCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC---cCcCCCCHHHEEEecCCCCCcEEEeeceeeEEcc
Confidence 9999999999887653 4889999999999999999999999 999999999999987665 9999999997654
Q ss_pred CCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhcc
Q 003158 664 VPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVID 743 (843)
Q Consensus 664 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 743 (843)
... ......||+.|+|||++.+..++.++|||||||++|||++|+.||........ ...
T Consensus 160 ~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~-~~~------------ 218 (284)
T 3kk8_A 160 DSE--------AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRL-YAQ------------ 218 (284)
T ss_dssp SSC--------BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHH------------
T ss_pred cCc--------cccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchhHH-HHH------------
Confidence 321 12335689999999999999999999999999999999999999975442111 100
Q ss_pred CCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCCCCccCCCCCcc
Q 003158 744 GNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYV 823 (843)
Q Consensus 744 ~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~sa~e~L~Hp~f 823 (843)
+....+. .|... .....+...+++.+||..||++|||++|+|+||||
T Consensus 219 ----------------~~~~~~~-~~~~~----------------~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~ 265 (284)
T 3kk8_A 219 ----------------IKAGAYD-YPSPE----------------WDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWI 265 (284)
T ss_dssp ----------------HHHTCCC-CCTTT----------------TTTSCHHHHHHHHHHSCSSTTTSCCHHHHTTSHHH
T ss_pred ----------------HHhcccc-CCchh----------------hcccCHHHHHHHHHHcccChhhCCCHHHHhcCccc
Confidence 0000000 00000 00111223367888899999999999999999999
Q ss_pred cCCCC
Q 003158 824 SSDVS 828 (843)
Q Consensus 824 ~~~~~ 828 (843)
+....
T Consensus 266 ~~~~~ 270 (284)
T 3kk8_A 266 CNRER 270 (284)
T ss_dssp HSCCC
T ss_pred cCChh
Confidence 77544
No 122
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=8.8e-41 Score=352.75 Aligned_cols=257 Identities=30% Similarity=0.484 Sum_probs=215.4
Q ss_pred HcCCCCCCcccccCCeeEEEEEeCCCcEEEEEEeccCChhhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEEecC
Q 003158 510 TNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFM 589 (843)
Q Consensus 510 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e~~ 589 (843)
.++|++.+.||+|+||.||+|...+++.||+|++..... ..+++.+|+++++.++||||+++++++.+.+..++||||+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 85 (267)
T 3t9t_A 7 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFM 85 (267)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCC
T ss_pred hhheeeeeEecCCCceeEEEEEecCCCeEEEEEccccCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCC
Confidence 467888999999999999999988889999999986433 3468899999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCCCC
Q 003158 590 SNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEG 669 (843)
Q Consensus 590 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~ 669 (843)
++++|.+++.... ..+++..++.++.|+++||.|||+++ |+||||||+||+++.++.+||+|||++.......
T Consensus 86 ~~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~--- 158 (267)
T 3t9t_A 86 EHGCLSDYLRTQR-GLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ--- 158 (267)
T ss_dssp TTCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHH---
T ss_pred CCCcHHHHHhhCc-ccCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCchheEEECCCCCEEEccccccccccccc---
Confidence 9999999997643 45889999999999999999999999 9999999999999999999999999998653211
Q ss_pred cccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHh-CCCCCCCCcchHHHHHHHhhcccchhhccCCCCC
Q 003158 670 IVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGS 748 (843)
Q Consensus 670 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 748 (843)
........++..|+|||++.+..++.++||||||+++|||++ |+.||...... .... .+..+....
T Consensus 159 ---~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~-~~~~---------~i~~~~~~~ 225 (267)
T 3t9t_A 159 ---YTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNS-EVVE---------DISTGFRLY 225 (267)
T ss_dssp ---HHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH-HHHH---------HHHTTCCCC
T ss_pred ---ccccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHH-HHHH---------HHhcCCcCC
Confidence 111123346778999999999999999999999999999999 89999765432 1111 111222233
Q ss_pred CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhh
Q 003158 749 YPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWN 787 (843)
Q Consensus 749 ~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~ 787 (843)
.+..++..+.+++.+||+.+|.+||++.++++.|+.+.+
T Consensus 226 ~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~ 264 (267)
T 3t9t_A 226 KPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAE 264 (267)
T ss_dssp CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCccCcHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 455567789999999999999999999999999998864
No 123
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=3e-41 Score=391.63 Aligned_cols=265 Identities=30% Similarity=0.461 Sum_probs=220.3
Q ss_pred HHHHHHHHcCCCCCCcccccCCeeEEEEEeCCCcEEEEEEeccCChhhHHHHHHHHHHHHhccCCcccceeeeeecCCcE
Q 003158 503 YGEMALATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQ 582 (843)
Q Consensus 503 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~ 582 (843)
.+.+.+..++|++.+.||+|+||.||+|.+.++..||||+++... ...++|.+|+++|++++|+||+++++++.+ +..
T Consensus 259 ~~~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~ 336 (535)
T 2h8h_A 259 KDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPI 336 (535)
T ss_dssp TTCSBCCGGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSC
T ss_pred ccceecchhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccc
Confidence 344555677899999999999999999999888889999998644 335689999999999999999999999976 678
Q ss_pred EEEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccC
Q 003158 583 MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLA 662 (843)
Q Consensus 583 ~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~ 662 (843)
++||||+++|+|.+++.......+++..++.++.||++||+|||+++ |+||||||+|||+++++.+||+|||+++..
T Consensus 337 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~---ivHrDlkp~NIll~~~~~~kl~DFG~a~~~ 413 (535)
T 2h8h_A 337 YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLI 413 (535)
T ss_dssp EEEECCCTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEEECCTTSTTTC
T ss_pred eEeeehhcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCCHhhEEEcCCCcEEEcccccceec
Confidence 99999999999999997654456889999999999999999999999 999999999999999999999999999865
Q ss_pred CCCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHh-CCCCCCCCcchHHHHHHHhhcccchhh
Q 003158 663 PVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSV 741 (843)
Q Consensus 663 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~ 741 (843)
.... ........++..|+|||++.+..++.++|||||||++|||++ |+.||...... +... .+
T Consensus 414 ~~~~------~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~-~~~~---------~i 477 (535)
T 2h8h_A 414 EDNE------YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR-EVLD---------QV 477 (535)
T ss_dssp CCHH------HHTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHH-HHHH---------HH
T ss_pred CCCc------eecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH-HHHH---------HH
Confidence 4211 011123346788999999999999999999999999999999 99999765431 1111 12
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhh
Q 003158 742 IDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNM 788 (843)
Q Consensus 742 ~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~ 788 (843)
..+.....+..+++.+.+++.+||+.+|++||++.++++.|+.+...
T Consensus 478 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~ 524 (535)
T 2h8h_A 478 ERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTS 524 (535)
T ss_dssp HTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSCC
T ss_pred HcCCCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHhhc
Confidence 22223345667788999999999999999999999999999987653
No 124
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4.1e-41 Score=369.63 Aligned_cols=285 Identities=22% Similarity=0.351 Sum_probs=204.2
Q ss_pred HHcCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCChhh-----HHHHHHHHHHHHhccCCcccceeeeeecCCcE
Q 003158 509 ATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQG-----EKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQ 582 (843)
Q Consensus 509 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-----~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~ 582 (843)
..++|++.+.||+|+||.||+|... +|+.||||++....... .+.+.+|+++++.++||||+++++++.+.+..
T Consensus 8 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 87 (346)
T 1ua2_A 8 RAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNI 87 (346)
T ss_dssp -----CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCC
T ss_pred HhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCce
Confidence 4578999999999999999999965 68999999987532221 24678999999999999999999999999999
Q ss_pred EEEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccC
Q 003158 583 MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLA 662 (843)
Q Consensus 583 ~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~ 662 (843)
++||||+++ +|.+++... ...+++..++.++.|+++||+|||+++ |+||||||+||+++.++.+||+|||+++..
T Consensus 88 ~lv~e~~~~-~l~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~ 162 (346)
T 1ua2_A 88 SLVFDFMET-DLEVIIKDN-SLVLTPSHIKAYMLMTLQGLEYLHQHW---ILHRDLKPNNLLLDENGVLKLADFGLAKSF 162 (346)
T ss_dssp EEEEECCSE-EHHHHHTTC-CSSCCSSHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEEECCCGGGSTT
T ss_pred EEEEEcCCC-CHHHHHHhc-CcCCCHHHHHHHHHHHHHHHHHHHHCC---EECCCCCHHHEEEcCCCCEEEEecccceec
Confidence 999999975 899988654 346889999999999999999999999 999999999999999999999999999876
Q ss_pred CCCCCCCcccceeeeeecccCCccCchhcccC-CCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhh
Q 003158 663 PVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTH-KLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSV 741 (843)
Q Consensus 663 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~ 741 (843)
.... .......||+.|+|||++.+. .++.++|||||||++|||++|..||...... +.....+....
T Consensus 163 ~~~~-------~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~-~~~~~i~~~~~---- 230 (346)
T 1ua2_A 163 GSPN-------RAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDL-DQLTRIFETLG---- 230 (346)
T ss_dssp TSCC-------CCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHHHC----
T ss_pred cCCc-------ccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHH-HHHHHHHHHcC----
Confidence 4321 122345689999999999764 5889999999999999999999888765432 22211111000
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCCCCccCCCCC
Q 003158 742 IDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHP 821 (843)
Q Consensus 742 ~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~sa~e~L~Hp 821 (843)
.......+..+ .+.. ......+|... .....+.....+.+|+.+||..||++|||++|+|+||
T Consensus 231 -~~~~~~~~~~~-----~~~~---~~~~~~~~~~~--------~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h~ 293 (346)
T 1ua2_A 231 -TPTEEQWPDMC-----SLPD---YVTFKSFPGIP--------LHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMK 293 (346)
T ss_dssp -CCCTTTSSSTT-----SSTT---CCCCCCCCCCC--------HHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTSG
T ss_pred -CCChhhhhhhc-----cCcc---cccccccCCCC--------hHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcCh
Confidence 00000000000 0000 00000111100 0011233344556799999999999999999999999
Q ss_pred cccCCC
Q 003158 822 YVSSDV 827 (843)
Q Consensus 822 ~f~~~~ 827 (843)
||+...
T Consensus 294 ~f~~~~ 299 (346)
T 1ua2_A 294 YFSNRP 299 (346)
T ss_dssp GGTSSS
T ss_pred hhhcCC
Confidence 998654
No 125
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=1.8e-41 Score=374.71 Aligned_cols=277 Identities=21% Similarity=0.359 Sum_probs=196.2
Q ss_pred HcCCCCCCcccccCCeeEEEEEe-CCCcEEEEEEeccC--ChhhHHHHHHHHHHHHhccCCcccceeeeeecC------C
Q 003158 510 TNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEG--SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE------G 580 (843)
Q Consensus 510 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~------~ 580 (843)
.++|++.+.||+|+||.||+|.. .+|+.||||++... .....+++.+|+++++.++||||+++++++... .
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~ 107 (367)
T 2fst_X 28 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN 107 (367)
T ss_dssp ETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred CCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCC
Confidence 36899999999999999999995 46899999998753 233456788999999999999999999998653 5
Q ss_pred cEEEEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccc
Q 003158 581 EQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSR 660 (843)
Q Consensus 581 ~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~ 660 (843)
..++||||+ +++|.+++.. ..+++..++.++.||++||+|||+.+ |+||||||+|||++.++.+||+|||+++
T Consensus 108 ~~~lv~e~~-~~~L~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~g---ivH~Dlkp~NIll~~~~~~kL~DFG~a~ 180 (367)
T 2fst_X 108 DVYLVTHLM-GADLNNIVKC---QKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR 180 (367)
T ss_dssp CCEEEEECC-CEECC--------CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEEECC-----
T ss_pred eEEEEeccc-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHhhEEECCCCCEEEeeccccc
Confidence 679999999 7899999864 35899999999999999999999999 9999999999999999999999999998
Q ss_pred cCCCCCCCCcccceeeeeecccCCccCchhccc-CCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccch
Q 003158 661 LAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMF 739 (843)
Q Consensus 661 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~ 739 (843)
.... ......||+.|+|||++.+ ..++.++||||+||++|||++|+.||..... .+++.....
T Consensus 181 ~~~~----------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~-~~~l~~i~~----- 244 (367)
T 2fst_X 181 HTAD----------EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH-IDQLKLILR----- 244 (367)
T ss_dssp --------------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSH-HHHHHHHHH-----
T ss_pred cccc----------cCCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHH-----
Confidence 6432 1234578999999999987 6789999999999999999999999976543 222222111
Q ss_pred hhccCCCCCCCHHHHH-----HHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCCCC
Q 003158 740 SVIDGNMGSYPSECVE-----KFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSS 814 (843)
Q Consensus 740 ~~~~~~~~~~~~~~~~-----~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~sa 814 (843)
.+ +..+.+... .....+. .+...| +..+.+ .++..++.+.|||.+||++||++|+|+
T Consensus 245 -~~----g~p~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~----------~~~~~~~~~~dLl~~mL~~dP~~R~t~ 306 (367)
T 2fst_X 245 -LV----GTPGAELLKKISSESARNYIQ-SLTQMP--KMNFAN----------VFIGANPLAVDLLEKMLVLDSDKRITA 306 (367)
T ss_dssp -HH----CSCCHHHHTTCCCHHHHHHHH-TSCCCC--CCCHHH----------HTTTCCHHHHHHHHHHSCSSGGGSCCH
T ss_pred -Hh----CCCCHHHHHHhhhHHHHHHHh-ccCCCC--CCCHHH----------HCCCCCHHHHHHHHHhCCCCcccCcCH
Confidence 00 111111111 1111111 111111 122221 233445566789999999999999999
Q ss_pred ccCCCCCcccCCC
Q 003158 815 SSMLKHPYVSSDV 827 (843)
Q Consensus 815 ~e~L~Hp~f~~~~ 827 (843)
+|+|+||||+...
T Consensus 307 ~e~L~hp~~~~~~ 319 (367)
T 2fst_X 307 AQALAHAYFAQYH 319 (367)
T ss_dssp HHHHTSGGGTTTC
T ss_pred HHHhcChhhhhcc
Confidence 9999999998643
No 126
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=3.1e-40 Score=365.27 Aligned_cols=279 Identities=18% Similarity=0.202 Sum_probs=212.1
Q ss_pred HHcCCCCCCcccccCCeeEEEEEeCC------CcEEEEEEeccCChhhH-----------HHHHHHHHHHHhccCCcccc
Q 003158 509 ATNNFNSSTQIGQGGYGKVYKGILPD------GTVVAVKRAQEGSLQGE-----------KEFLTEIQFLSRLHHRNLVS 571 (843)
Q Consensus 509 ~~~~~~~~~~lg~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~~~-----------~~~~~E~~~l~~l~h~nIv~ 571 (843)
..++|++.+.||+|+||+||+|.+.+ ++.||||++........ ..+..|+..++.++||||++
T Consensus 33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~ 112 (364)
T 3op5_A 33 AAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPK 112 (364)
T ss_dssp TCCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCC
T ss_pred CCCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCe
Confidence 34589999999999999999999754 47899999876542211 12345666777888999999
Q ss_pred eeeeeecC----CcEEEEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEc-
Q 003158 572 LVGYCDEE----GEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLD- 646 (843)
Q Consensus 572 l~~~~~~~----~~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~- 646 (843)
+++++... ...++||||+ +++|.+++... ...+++..++.++.||+.||+|||+++ |+||||||+|||++
T Consensus 113 ~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~-~~~l~~~~~~~i~~qi~~~l~~lH~~~---iiHrDlkp~Nill~~ 187 (364)
T 3op5_A 113 YWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEAN-AKRFSRKTVLQLSLRILDILEYIHEHE---YVHGDIKASNLLLNY 187 (364)
T ss_dssp EEEEEEEEETTEEEEEEEEECE-EEEHHHHHHHT-TSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEEES
T ss_pred EEeeeeeccCCcceEEEEEeCC-CCCHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEEecCCHHHEEEec
Confidence 99998664 4589999999 99999999764 346899999999999999999999999 99999999999999
Q ss_pred -CCCcEEEeeccccccCCCCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCcch
Q 003158 647 -HKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNI 725 (843)
Q Consensus 647 -~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~ 725 (843)
.++.+||+|||+++....................||+.|+|||++.+..++.++|||||||++|||++|+.||......
T Consensus 188 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~ 267 (364)
T 3op5_A 188 KNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKD 267 (364)
T ss_dssp SCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTC
T ss_pred CCCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccC
Confidence 8899999999999876432211111111223456999999999999999999999999999999999999999753222
Q ss_pred HHHH---HHHhhcccchhhccCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCC
Q 003158 726 VREV---NIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTK 795 (843)
Q Consensus 726 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~ 795 (843)
.... ...+. ..+..+++..+. +..++.++.+++..||+.+|.+||++.++++.|+.+.+........
T Consensus 268 ~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~~~~~~~~~~ 337 (364)
T 3op5_A 268 PKYVRDSKIRYR-ENIASLMDKCFP--AANAPGEIAKYMETVKLLDYTEKPLYENLRDILLQGLKAIGSKDDG 337 (364)
T ss_dssp HHHHHHHHHHHH-HCHHHHHHHHSC--TTCCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTTCCCCC
T ss_pred HHHHHHHHHHhh-hhHHHHHHHhcc--cccCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHcCCCcCC
Confidence 2111 11111 111122221111 1234578899999999999999999999999999998866544443
No 127
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=3.5e-41 Score=372.43 Aligned_cols=296 Identities=20% Similarity=0.323 Sum_probs=213.2
Q ss_pred HcCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCC-hhhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEEe
Q 003158 510 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 587 (843)
Q Consensus 510 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e 587 (843)
.++|++.+.||+|+||+||+|... +++.||+|++.... ....+.+.+|+++++.++||||+++++++.+++..++|||
T Consensus 32 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 111 (360)
T 3eqc_A 32 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 111 (360)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEEC
T ss_pred cccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEE
Confidence 467899999999999999999975 68999999998653 3335678999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcC-CCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCC
Q 003158 588 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTE-ADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 666 (843)
Q Consensus 588 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~-~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~ 666 (843)
|+++|+|.+++.... .+++..+..++.|+++||+|||+. + |+||||||+||+++.++.+||+|||++.....
T Consensus 112 ~~~~~~L~~~l~~~~--~~~~~~~~~i~~~i~~~l~~lh~~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~-- 184 (360)
T 3eqc_A 112 HMDGGSLDQVLKKAG--RIPEQILGKVSIAVIKGLTYLREKHK---IMHRDVKPSNILVNSRGEIKLCDFGVSGQLID-- 184 (360)
T ss_dssp CCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHHHC---CCCSCCSGGGEEECTTCCEEECCCCCCHHHHH--
T ss_pred CCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHhCC---EEcCCccHHHEEECCCCCEEEEECCCCccccc--
Confidence 999999999997654 488899999999999999999996 8 99999999999999999999999999865421
Q ss_pred CCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhccCCC
Q 003158 667 IEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNM 746 (843)
Q Consensus 667 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 746 (843)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||........... ... ...+..
T Consensus 185 -------~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~--~~~-----~~~~~~ 250 (360)
T 3eqc_A 185 -------SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELM--FGC-----QVEGDA 250 (360)
T ss_dssp -------HC----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHH--HC------------
T ss_pred -------ccccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH--hcc-----cccccC
Confidence 122345689999999999999999999999999999999999999976543221111 000 000000
Q ss_pred CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhh-hCCC--CCCCCCccccCCCCCCCCCCCCCccCCCCCcc
Q 003158 747 GSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWN-MMPE--SDTKTPEFINSEHTSKEETPPSSSSMLKHPYV 823 (843)
Q Consensus 747 ~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~-~~~~--~~~~~~dll~~~L~~dp~~R~sa~e~L~Hp~f 823 (843)
...+..... ..... .-+..+........++.+.+..... ..+. .+..+.+|+.+||+.||++|||++|+|+||||
T Consensus 251 ~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~ 328 (360)
T 3eqc_A 251 AETPPRPRT-PGRPL-NKFGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFI 328 (360)
T ss_dssp -------------------------CCCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTSHHH
T ss_pred CCCCCCccc-CCCcc-cccccCCCCcccchhhhhHHhccCCCCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhhChHh
Confidence 000000000 00000 0011111122233333333322111 0110 12234589999999999999999999999999
Q ss_pred cCCCC
Q 003158 824 SSDVS 828 (843)
Q Consensus 824 ~~~~~ 828 (843)
+....
T Consensus 329 ~~~~~ 333 (360)
T 3eqc_A 329 KRSDA 333 (360)
T ss_dssp HHHHH
T ss_pred hcchH
Confidence 76444
No 128
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=3.9e-40 Score=360.01 Aligned_cols=264 Identities=25% Similarity=0.478 Sum_probs=217.2
Q ss_pred HHcCCCCCCcccccCCeeEEEEEeC--------CCcEEEEEEeccCCh-hhHHHHHHHHHHHHhc-cCCcccceeeeeec
Q 003158 509 ATNNFNSSTQIGQGGYGKVYKGILP--------DGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRL-HHRNLVSLVGYCDE 578 (843)
Q Consensus 509 ~~~~~~~~~~lg~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~ 578 (843)
..++|++.+.||+|+||+||+|... +++.||||++..... ...+++.+|+++++.+ +||||+++++++.+
T Consensus 33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~ 112 (334)
T 2pvf_A 33 PRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ 112 (334)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred CHhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEcc
Confidence 4578999999999999999999863 467899999976433 3456789999999999 89999999999999
Q ss_pred CCcEEEEEecCCCCCHHHHHhhcCC--------------CCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEE
Q 003158 579 EGEQMLVYEFMSNGTLRDQLSAKSK--------------EPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNIL 644 (843)
Q Consensus 579 ~~~~~lV~e~~~~gsL~~~l~~~~~--------------~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NIL 644 (843)
.+..++||||+++|+|.+++..... ..+++..++.++.||++||+|||+.+ |+||||||+||+
T Consensus 113 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIl 189 (334)
T 2pvf_A 113 DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK---CIHRDLAARNVL 189 (334)
T ss_dssp SSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEE
T ss_pred CCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCccceEE
Confidence 9999999999999999999976432 24889999999999999999999999 999999999999
Q ss_pred EcCCCcEEEeeccccccCCCCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHh-CCCCCCCCc
Q 003158 645 LDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGK 723 (843)
Q Consensus 645 l~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~ellt-g~~pf~~~~ 723 (843)
++.++.+||+|||+++....... ........+++.|+|||++.+..++.++|||||||++|||++ |+.||....
T Consensus 190 l~~~~~~kL~Dfg~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~ 264 (334)
T 2pvf_A 190 VTENNVMKIADFGLARDINNIDY-----YKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP 264 (334)
T ss_dssp ECTTCCEEECCCTTCEECTTTSS-----EECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCC
T ss_pred EcCCCCEEEcccccccccccccc-----ccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCC
Confidence 99999999999999986643221 112233457788999999999999999999999999999999 999997543
Q ss_pred chHHHHHHHhhcccchhhccCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCC
Q 003158 724 NIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMP 790 (843)
Q Consensus 724 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~ 790 (843)
. .+... .+..+.....+..++..+.+++..||+.+|.+||++.++++.|+++....+
T Consensus 265 ~-~~~~~---------~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~~~~~ 321 (334)
T 2pvf_A 265 V-EELFK---------LLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTT 321 (334)
T ss_dssp H-HHHHH---------HHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC
T ss_pred H-HHHHH---------HHhcCCCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhccc
Confidence 2 11111 111222334456677889999999999999999999999999999877543
No 129
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=2.5e-40 Score=354.69 Aligned_cols=257 Identities=21% Similarity=0.329 Sum_probs=207.6
Q ss_pred HcCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCC---hhhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEE
Q 003158 510 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLV 585 (843)
Q Consensus 510 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV 585 (843)
.++|.+.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|+++++.++||||+++++++.+.+..++|
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 93 (294)
T 2rku_A 14 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 93 (294)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEE
Confidence 357888999999999999999975 58899999986532 23456788999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCC
Q 003158 586 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVP 665 (843)
Q Consensus 586 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~ 665 (843)
|||+++++|.+++.... .+++..++.++.|+++||+|||+++ |+||||||+||++++++.+||+|||++......
T Consensus 94 ~e~~~~~~L~~~~~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~ 168 (294)
T 2rku_A 94 LELCRRRSLLELHKRRK--ALTEPEARYYLRQIVLGCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYD 168 (294)
T ss_dssp EECCTTCBHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEECCST
T ss_pred EecCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCChHhEEEcCCCCEEEEeccCceecccC
Confidence 99999999999987643 5889999999999999999999999 999999999999999999999999999865422
Q ss_pred CCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhccCC
Q 003158 666 DIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGN 745 (843)
Q Consensus 666 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 745 (843)
. .......||+.|+|||.+.+..++.++||||||+++|||++|+.||......... .. +...
T Consensus 169 ~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~-~~---------~~~~- 230 (294)
T 2rku_A 169 G-------ERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETY-LR---------IKKN- 230 (294)
T ss_dssp T-------CCBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHH-HH---------HHTT-
T ss_pred c-------cccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH-HH---------Hhhc-
Confidence 1 1123456899999999999999999999999999999999999999754321110 00 0000
Q ss_pred CCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCCCCccCCCCCcccC
Q 003158 746 MGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSS 825 (843)
Q Consensus 746 ~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~sa~e~L~Hp~f~~ 825 (843)
....+.. .+....+++.+||..||++|||++|+++||||.+
T Consensus 231 ~~~~~~~---------------------------------------~~~~~~~li~~~l~~~p~~Rps~~~ll~~~~~~~ 271 (294)
T 2rku_A 231 EYSIPKH---------------------------------------INPVAASLIQKMLQTDPTARPTINELLNDEFFTS 271 (294)
T ss_dssp CCCCCTT---------------------------------------SCHHHHHHHHHHTCSSGGGSCCGGGGGGSHHHHT
T ss_pred cCCCccc---------------------------------------cCHHHHHHHHHHcccChhhCcCHHHHhhChheec
Confidence 0001111 1112235777888999999999999999999987
Q ss_pred CCC
Q 003158 826 DVS 828 (843)
Q Consensus 826 ~~~ 828 (843)
...
T Consensus 272 ~~~ 274 (294)
T 2rku_A 272 GYI 274 (294)
T ss_dssp SCC
T ss_pred CCc
Confidence 654
No 130
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=9.6e-41 Score=374.84 Aligned_cols=295 Identities=24% Similarity=0.326 Sum_probs=194.5
Q ss_pred cCCCC-CCcccccCCeeEEEEEeC---CCcEEEEEEeccCChhhHHHHHHHHHHHHhccCCcccceeeeee--cCCcEEE
Q 003158 511 NNFNS-STQIGQGGYGKVYKGILP---DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCD--EEGEQML 584 (843)
Q Consensus 511 ~~~~~-~~~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~--~~~~~~l 584 (843)
+.|++ .++||+|+||+||+|... +++.||||++..... ...+.+|+++++.++||||+++++++. .....++
T Consensus 20 ~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~--~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~l 97 (405)
T 3rgf_A 20 DLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGI--SMSACREIALLRELKHPNVISLQKVFLSHADRKVWL 97 (405)
T ss_dssp HHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSSC--CHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEE
T ss_pred hhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCC--CHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEE
Confidence 45665 457999999999999965 578999999975432 346889999999999999999999994 4678999
Q ss_pred EEecCCCCCHHHHHhhc-------CCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEE----cCCCcEEE
Q 003158 585 VYEFMSNGTLRDQLSAK-------SKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILL----DHKFTAKV 653 (843)
Q Consensus 585 V~e~~~~gsL~~~l~~~-------~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl----~~~~~~kl 653 (843)
||||++ |+|.+++... ....+++..++.++.||+.||+|||+++ |+||||||+|||+ +.++.+||
T Consensus 98 v~e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~kl 173 (405)
T 3rgf_A 98 LFDYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANW---VLHRDLKPANILVMGEGPERGRVKI 173 (405)
T ss_dssp EEECCS-EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECCSSTTTTCEEE
T ss_pred EEeCCC-CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhCC---EeCCCcCHHHeEEecCCCCCCcEEE
Confidence 999996 5888887532 1234889999999999999999999999 9999999999999 77889999
Q ss_pred eeccccccCCCCCCCCcccceeeeeecccCCccCchhcccC-CCCchhhhHHHHHHHHHHHhCCCCCCCCcchH------
Q 003158 654 ADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTH-KLTDKSDVYSLGVVFLELLTGMQPISHGKNIV------ 726 (843)
Q Consensus 654 ~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~------ 726 (843)
+|||+|+....... .........||+.|+|||++.+. .++.++|||||||++|||++|+.||.......
T Consensus 174 ~Dfg~a~~~~~~~~----~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~ 249 (405)
T 3rgf_A 174 ADMGFARLFNSPLK----PLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPY 249 (405)
T ss_dssp CCTTCCC--------------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCC
T ss_pred EECCCceecCCCCc----ccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccc
Confidence 99999987643211 11223446789999999999874 58999999999999999999999997543211
Q ss_pred --HHHHHHhhcccchhhccCCCCC-CCH-HHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccC
Q 003158 727 --REVNIAYQSSMMFSVIDGNMGS-YPS-ECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINS 802 (843)
Q Consensus 727 --~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~ 802 (843)
+++...+ ..+...... .+. ........+.. .+...........+ .++ ......+..+.+||.+
T Consensus 250 ~~~~l~~i~------~~~g~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~---~~~---~~~~~~~~~~~~Ll~~ 316 (405)
T 3rgf_A 250 HHDQLDRIF------NVMGFPADKDWEDIKKMPEHSTLMK-DFRRNTYTNCSLIK---YME---KHKVKPDSKAFHLLQK 316 (405)
T ss_dssp CHHHHHHHH------HHHCCCCTTTCGGGGGSTTHHHHHH-HCCGGGGTTCCHHH---HHH---TTTCCTTSHHHHHHHH
T ss_pred hHHHHHHHH------HhhCCCChhhcchhhcCcchhhhhh-hccccCCCcchhhh---hHh---hcCCCCCHHHHHHHHH
Confidence 1111110 000000000 000 00000000111 01111111111111 111 1122335566789999
Q ss_pred CCCCCCCCCCCCccCCCCCcccCCCC
Q 003158 803 EHTSKEETPPSSSSMLKHPYVSSDVS 828 (843)
Q Consensus 803 ~L~~dp~~R~sa~e~L~Hp~f~~~~~ 828 (843)
||++||++|+||+|+|+||||.+...
T Consensus 317 ~L~~dP~~R~ta~e~L~hp~f~~~~~ 342 (405)
T 3rgf_A 317 LLTMDPIKRITSEQAMQDPYFLEDPL 342 (405)
T ss_dssp HSCSSGGGSCCHHHHHTSGGGTSSSC
T ss_pred HccCCcccCCCHHHHhcChhhccCCC
Confidence 99999999999999999999987654
No 131
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=1e-40 Score=364.25 Aligned_cols=286 Identities=24% Similarity=0.364 Sum_probs=209.7
Q ss_pred HcCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCCh--hhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEE
Q 003158 510 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 586 (843)
Q Consensus 510 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~ 586 (843)
.++|++.+.||+|+||.||+|... +|+.||||++..... ...+.+.+|+++++.++||||+++++++.+.+..++||
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 103 (331)
T 4aaa_A 24 MEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVF 103 (331)
T ss_dssp GGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEE
Confidence 357889999999999999999975 589999999865432 23466889999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCC
Q 003158 587 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 666 (843)
Q Consensus 587 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~ 666 (843)
||+++++|.+++... ..+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++......
T Consensus 104 e~~~~~~l~~~~~~~--~~~~~~~~~~~~~qi~~~l~~LH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 178 (331)
T 4aaa_A 104 EFVDHTILDDLELFP--NGLDYQVVQKYLFQIINGIGFCHSHN---IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPG 178 (331)
T ss_dssp ECCSEEHHHHHHHST--TCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCCTTC-------
T ss_pred ecCCcchHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHHHCC---EEccCcChheEEEcCCCcEEEEeCCCceeecCCc
Confidence 999999998887543 35889999999999999999999999 9999999999999999999999999997654321
Q ss_pred CCCcccceeeeeecccCCccCchhcccC-CCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhccCC
Q 003158 667 IEGIVPAHVSTVVKGTPGYLDPEYFLTH-KLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGN 745 (843)
Q Consensus 667 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 745 (843)
.......||+.|+|||++.+. .++.++|||||||++|||++|+.||................
T Consensus 179 -------~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~---------- 241 (331)
T 4aaa_A 179 -------EVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCL---------- 241 (331)
T ss_dssp ------------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHH----------
T ss_pred -------cccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHh----------
Confidence 122345689999999999875 78999999999999999999999997665432221111000
Q ss_pred CCCCCHHHHHHHHHHHH--HhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCCCCccCCCCCcc
Q 003158 746 MGSYPSECVEKFIKLAL--KCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYV 823 (843)
Q Consensus 746 ~~~~~~~~~~~l~~l~~--~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~sa~e~L~Hp~f 823 (843)
+..+......+..-.. .........+.... ...+..+....+|+.+||..||++|||++|+|+||||
T Consensus 242 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp~f 310 (331)
T 4aaa_A 242 -GNLIPRHQELFNKNPVFAGVRLPEIKEREPLE----------RRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHDFF 310 (331)
T ss_dssp -CSCCHHHHHHHHHCGGGTTCCCCCCSSCCCHH----------HHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGSHHH
T ss_pred -CCCChhhhhHhhhccccccccCccccccchhh----------hcccchhHHHHHHHHHHhccCcccCCCHHHHhcCchh
Confidence 0111111111100000 00000001111111 1223334456689999999999999999999999999
Q ss_pred cCCCC
Q 003158 824 SSDVS 828 (843)
Q Consensus 824 ~~~~~ 828 (843)
+.+..
T Consensus 311 ~~~~~ 315 (331)
T 4aaa_A 311 QMDGF 315 (331)
T ss_dssp HGGGH
T ss_pred ccCCh
Confidence 87643
No 132
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=5.3e-41 Score=367.33 Aligned_cols=257 Identities=21% Similarity=0.350 Sum_probs=200.6
Q ss_pred HHcCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCChhhHHHHHHHHHHHHhc-cCCcccceeeeeecCCcEEEEE
Q 003158 509 ATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQMLVY 586 (843)
Q Consensus 509 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~lV~ 586 (843)
..++|++.+.||+|+||+||+|... +++.||||++..... ...+|++++.++ +||||+++++++.+.+..++||
T Consensus 20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~----~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ 95 (342)
T 2qr7_A 20 FTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR----DPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVT 95 (342)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC----CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEE
T ss_pred ccccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC----ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEE
Confidence 4568999999999999999999975 689999999976432 235688888888 7999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCC----CcEEEeeccccccC
Q 003158 587 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHK----FTAKVADFGLSRLA 662 (843)
Q Consensus 587 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~----~~~kl~DfGla~~~ 662 (843)
||+++|+|.+++... ..+++..+..++.||+.||+|||+++ |+||||||+|||+.++ +.+||+|||+++..
T Consensus 96 E~~~gg~L~~~i~~~--~~~~~~~~~~~~~qi~~al~~lH~~g---ivHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~ 170 (342)
T 2qr7_A 96 ELMKGGELLDKILRQ--KFFSEREASAVLFTITKTVEYLHAQG---VVHRDLKPSNILYVDESGNPESIRICDFGFAKQL 170 (342)
T ss_dssp CCCCSCBHHHHHHTC--TTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEESSSSCSGGGEEECCCTTCEEC
T ss_pred eCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCC---cEeccCCHHHEEEecCCCCcCeEEEEECCCcccC
Confidence 999999999999664 35899999999999999999999999 9999999999998543 35999999999865
Q ss_pred CCCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCcc-hHHHHHHHhhcccchhh
Q 003158 663 PVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKN-IVREVNIAYQSSMMFSV 741 (843)
Q Consensus 663 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~-~~~~~~~~~~~~~~~~~ 741 (843)
.... .......||+.|+|||++.+..++.++|||||||++|||++|+.||..... ...
T Consensus 171 ~~~~-------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~-------------- 229 (342)
T 2qr7_A 171 RAEN-------GLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPE-------------- 229 (342)
T ss_dssp BCTT-------CCBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHH--------------
T ss_pred cCCC-------CceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHH--------------
Confidence 4321 122345689999999999988889999999999999999999999975321 010
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCCCCccCCCCC
Q 003158 742 IDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHP 821 (843)
Q Consensus 742 ~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~sa~e~L~Hp 821 (843)
++.+.+...-...+.. .++..+..+.+|+++||..||++|+|++|+++||
T Consensus 230 --------------~~~~~i~~~~~~~~~~----------------~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~hp 279 (342)
T 2qr7_A 230 --------------EILARIGSGKFSLSGG----------------YWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRHP 279 (342)
T ss_dssp --------------HHHHHHHHCCCCCCST----------------TTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTSH
T ss_pred --------------HHHHHHccCCcccCcc----------------ccccCCHHHHHHHHHHCCCChhHCcCHHHHhcCC
Confidence 0111111100000000 0011223344788889999999999999999999
Q ss_pred cccC
Q 003158 822 YVSS 825 (843)
Q Consensus 822 ~f~~ 825 (843)
||..
T Consensus 280 ~~~~ 283 (342)
T 2qr7_A 280 WIVH 283 (342)
T ss_dssp HHHT
T ss_pred eecC
Confidence 9954
No 133
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=2.9e-40 Score=361.20 Aligned_cols=257 Identities=21% Similarity=0.334 Sum_probs=206.9
Q ss_pred HcCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCC---hhhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEE
Q 003158 510 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLV 585 (843)
Q Consensus 510 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV 585 (843)
.++|.+.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 40 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 119 (335)
T 2owb_A 40 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 119 (335)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred CCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEE
Confidence 357888999999999999999975 58899999987532 23456789999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCC
Q 003158 586 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVP 665 (843)
Q Consensus 586 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~ 665 (843)
|||+++++|.+++.... .+++..++.++.|+++||+|||+++ |+||||||+||+++.++.+||+|||+++.....
T Consensus 120 ~e~~~~~~L~~~~~~~~--~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~ 194 (335)
T 2owb_A 120 LELCRRRSLLELHKRRK--ALTEPEARYYLRQIVLGCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYD 194 (335)
T ss_dssp ECCCTTCBHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECTTCCEEECCCTTCEECCST
T ss_pred EecCCCCCHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHCC---CEecCCCchhEEEcCCCCEEEeeccCceecccC
Confidence 99999999999987643 5889999999999999999999999 999999999999999999999999999865422
Q ss_pred CCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhccCC
Q 003158 666 DIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGN 745 (843)
Q Consensus 666 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 745 (843)
. .......||+.|+|||++.+..++.++|||||||++|||++|+.||........... . ...
T Consensus 195 ~-------~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~-~---------~~~- 256 (335)
T 2owb_A 195 G-------ERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLR-I---------KKN- 256 (335)
T ss_dssp T-------CCBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHH-H---------HHT-
T ss_pred c-------ccccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHHHHHH-H---------hcC-
Confidence 1 112345689999999999999999999999999999999999999975432111000 0 000
Q ss_pred CCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCCCCccCCCCCcccC
Q 003158 746 MGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSS 825 (843)
Q Consensus 746 ~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~sa~e~L~Hp~f~~ 825 (843)
....+..+ +....+++.+||..||++|||++|+++||||++
T Consensus 257 ~~~~~~~~---------------------------------------~~~~~~li~~~l~~dp~~Rps~~ell~~~~~~~ 297 (335)
T 2owb_A 257 EYSIPKHI---------------------------------------NPVAASLIQKMLQTDPTARPTINELLNDEFFTS 297 (335)
T ss_dssp CCCCCTTS---------------------------------------CHHHHHHHHHHTCSSGGGSCCGGGGGGSHHHHT
T ss_pred CCCCCccC---------------------------------------CHHHHHHHHHHccCChhHCcCHHHHhcCccccC
Confidence 00011111 112235777788889999999999999999987
Q ss_pred CCC
Q 003158 826 DVS 828 (843)
Q Consensus 826 ~~~ 828 (843)
...
T Consensus 298 ~~~ 300 (335)
T 2owb_A 298 GYI 300 (335)
T ss_dssp SCC
T ss_pred CCc
Confidence 654
No 134
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=1e-40 Score=358.62 Aligned_cols=286 Identities=26% Similarity=0.400 Sum_probs=210.7
Q ss_pred cCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCChh--hHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEEe
Q 003158 511 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ--GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 587 (843)
Q Consensus 511 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e 587 (843)
++|++.+.||+|+||+||+|... +|+.||||++...... ..+.+.+|++++++++||||+++++++.+++..++|||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (299)
T 2r3i_A 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE 82 (299)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred chhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEEE
Confidence 57889999999999999999975 6899999998754322 23678899999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCC
Q 003158 588 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 667 (843)
Q Consensus 588 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~ 667 (843)
|++ ++|.+++.......+++..++.++.|+++||+|||+++ |+||||||+||+++.++.+||+|||++.......
T Consensus 83 ~~~-~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~- 157 (299)
T 2r3i_A 83 FLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV- 157 (299)
T ss_dssp CCS-EEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECSTTHHHHHCCCS-
T ss_pred ccc-CCHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCCCHHHeEEcCCCCEEECcchhhhhccCCc-
Confidence 997 69999998776667889999999999999999999999 9999999999999999999999999997654321
Q ss_pred CCcccceeeeeecccCCccCchhcccCC-CCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhccCCC
Q 003158 668 EGIVPAHVSTVVKGTPGYLDPEYFLTHK-LTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNM 746 (843)
Q Consensus 668 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 746 (843)
.......||+.|+|||.+.+.. ++.++|||||||++|||++|+.||........ ....... ...
T Consensus 158 ------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~-~~~~~~~------~~~-- 222 (299)
T 2r3i_A 158 ------RTYTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQ-LFRIFRT------LGT-- 222 (299)
T ss_dssp ------BCTTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHHHHHH------HCC--
T ss_pred ------cccCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccHHHH-HHHHHHH------hCC--
Confidence 1122345899999999998765 79999999999999999999999976553222 1111100 000
Q ss_pred CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCCCCccCCCCCcccCC
Q 003158 747 GSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSSD 826 (843)
Q Consensus 747 ~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~sa~e~L~Hp~f~~~ 826 (843)
.+...+.. +...+..++.+..... ..+....+..+....+|+.+||..||++|||++|+|+||||++.
T Consensus 223 --~~~~~~~~--------~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~l~hp~~~~~ 290 (299)
T 2r3i_A 223 --PDEVVWPG--------VTSMPDYKPSFPKWAR--QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDV 290 (299)
T ss_dssp --CCTTTSTT--------GGGSTTCCTTSCCCCC--CCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGTTC
T ss_pred --CchhhhhH--------hhcCcccchhhhcccc--hhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcChhhhcC
Confidence 00000000 0001111111100000 00011122334445689999999999999999999999999864
Q ss_pred CC
Q 003158 827 VS 828 (843)
Q Consensus 827 ~~ 828 (843)
..
T Consensus 291 ~~ 292 (299)
T 2r3i_A 291 TK 292 (299)
T ss_dssp CC
T ss_pred CC
Confidence 43
No 135
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=1.1e-40 Score=368.69 Aligned_cols=291 Identities=22% Similarity=0.280 Sum_probs=211.1
Q ss_pred cHHHHHHHHcCCCCCCcccccCCeeEEEEEeCCCcEEEEEEeccCCh-----------hhHHHHHHHHHHHHhccCCccc
Q 003158 502 TYGEMALATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSL-----------QGEKEFLTEIQFLSRLHHRNLV 570 (843)
Q Consensus 502 ~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~-----------~~~~~~~~E~~~l~~l~h~nIv 570 (843)
...++....++|.+.+.||+|+||.||+|...+|+.||||++..... ...+.+.+|++++++++||||+
T Consensus 13 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv 92 (362)
T 3pg1_A 13 LIAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNIL 92 (362)
T ss_dssp HHHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBC
T ss_pred HHHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCcc
Confidence 34577778899999999999999999999988899999999864221 1136789999999999999999
Q ss_pred ceeeeeec-----CCcEEEEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEE
Q 003158 571 SLVGYCDE-----EGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILL 645 (843)
Q Consensus 571 ~l~~~~~~-----~~~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl 645 (843)
++++++.. ....++||||++ |+|.+++... ...+++..++.++.||+.||.|||+++ |+||||||+||++
T Consensus 93 ~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~NIl~ 167 (362)
T 3pg1_A 93 GLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQ-RIVISPQHIQYFMYHILLGLHVLHEAG---VVHRDLHPGNILL 167 (362)
T ss_dssp CCSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHCT-TSCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEE
T ss_pred ceeeeEEeccCCCcceEEEEEccCC-CCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHCc---CEecCCChHHEEE
Confidence 99999843 346899999997 6898888653 346899999999999999999999999 9999999999999
Q ss_pred cCCCcEEEeeccccccCCCCCCCCcccceeeeeecccCCccCchhccc-CCCCchhhhHHHHHHHHHHHhCCCCCCCCcc
Q 003158 646 DHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKN 724 (843)
Q Consensus 646 ~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwS~G~~l~elltg~~pf~~~~~ 724 (843)
+.++.+||+|||+++..... .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||.....
T Consensus 168 ~~~~~~kl~Dfg~~~~~~~~--------~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~ 239 (362)
T 3pg1_A 168 ADNNDITICDFNLAREDTAD--------ANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTF 239 (362)
T ss_dssp CTTCCEEECCTTC-----------------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSH
T ss_pred cCCCCEEEEecCcccccccc--------cccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCH
Confidence 99999999999999754321 22234568899999999987 6789999999999999999999999976543
Q ss_pred hHHHHHHHhhcccchhhccCCCCCCCHHHH-----HHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCcc
Q 003158 725 IVREVNIAYQSSMMFSVIDGNMGSYPSECV-----EKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEF 799 (843)
Q Consensus 725 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dl 799 (843)
. ........ .. +..+.+.. ....+.........|..+ +....+..++.+.+|
T Consensus 240 ~-~~~~~i~~------~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~l 296 (362)
T 3pg1_A 240 Y-NQLNKIVE------VV----GTPKIEDVVMFSSPSARDYLRNSLSNVPARA------------WTAVVPTADPVALDL 296 (362)
T ss_dssp H-HHHHHHHH------HH----CCCCHHHHHHTSCHHHHHHTTTCCCCCCCCC------------HHHHSTTSCHHHHHH
T ss_pred H-HHHHHHHH------Hc----CCCChHHhhhccchhhhHHHHhhcccCChhh------------HHhhCCCCCHHHHHH
Confidence 2 21111110 00 00111110 011111111111111111 111223344556689
Q ss_pred ccCCCCCCCCCCCCCccCCCCCcccCCCC
Q 003158 800 INSEHTSKEETPPSSSSMLKHPYVSSDVS 828 (843)
Q Consensus 800 l~~~L~~dp~~R~sa~e~L~Hp~f~~~~~ 828 (843)
+.+||..||++|||++|+|+||||++...
T Consensus 297 i~~~L~~dP~~Rpt~~ell~hp~f~~~~~ 325 (362)
T 3pg1_A 297 IAKMLEFNPQRRISTEQALRHPYFESLFD 325 (362)
T ss_dssp HHHHTCSSGGGSCCHHHHHTSGGGTTTCC
T ss_pred HHHHhcCChhhCCCHHHHHcCchhhhccC
Confidence 99999999999999999999999987544
No 136
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=5.5e-40 Score=355.74 Aligned_cols=271 Identities=25% Similarity=0.427 Sum_probs=220.8
Q ss_pred ccHHHHHHHHcCCCCCCcccccCCeeEEEEEe------CCCcEEEEEEeccCChh-hHHHHHHHHHHHHhc-cCCcccce
Q 003158 501 FTYGEMALATNNFNSSTQIGQGGYGKVYKGIL------PDGTVVAVKRAQEGSLQ-GEKEFLTEIQFLSRL-HHRNLVSL 572 (843)
Q Consensus 501 ~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l-~h~nIv~l 572 (843)
+...++....++|++.+.||+|+||+||+|.+ .+++.||||++...... ..+.+.+|+++++++ +||||+++
T Consensus 17 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~ 96 (316)
T 2xir_A 17 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL 96 (316)
T ss_dssp CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred ccccceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeE
Confidence 34456666778999999999999999999984 24689999999864433 346789999999999 79999999
Q ss_pred eeeeecCC-cEEEEEecCCCCCHHHHHhhcCC--------------CCcchhHHHHHHHHHHHHHHHHhcCCCCCEEecc
Q 003158 573 VGYCDEEG-EQMLVYEFMSNGTLRDQLSAKSK--------------EPLGFAMRLSIALGSSRGILYLHTEADPPVFHRD 637 (843)
Q Consensus 573 ~~~~~~~~-~~~lV~e~~~~gsL~~~l~~~~~--------------~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~D 637 (843)
++++...+ ..++||||+++|+|.+++..... ..+++..++.++.|+++||.|||+++ |+|||
T Consensus 97 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---i~H~d 173 (316)
T 2xir_A 97 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRD 173 (316)
T ss_dssp EEEECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHTT---CCCSC
T ss_pred EEEEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhCC---ccccc
Confidence 99987654 58999999999999999976542 23889999999999999999999999 99999
Q ss_pred CCCCcEEEcCCCcEEEeeccccccCCCCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHh-CC
Q 003158 638 IKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GM 716 (843)
Q Consensus 638 lkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~ellt-g~ 716 (843)
|||+||+++.++.+||+|||+++....... ........||+.|+|||++.+..++.++|||||||++|||++ |+
T Consensus 174 ikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-----~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~ 248 (316)
T 2xir_A 174 LAARNILLSEKNVVKICDFGLARDIYKDPD-----YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGA 248 (316)
T ss_dssp CSGGGEEECGGGCEEECCCGGGSCTTTCTT-----SEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSC
T ss_pred CccceEEECCCCCEEECCCccccccccCcc-----ceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCC
Confidence 999999999999999999999986543221 122334567889999999999999999999999999999998 99
Q ss_pred CCCCCCcchHHHHHHHhhcccchhhccCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhh
Q 003158 717 QPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNM 788 (843)
Q Consensus 717 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~ 788 (843)
.||............ +..+.....+..+++.+.+++..||+.+|.+||++.++++.|+.+...
T Consensus 249 ~p~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 311 (316)
T 2xir_A 249 SPYPGVKIDEEFCRR---------LKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 311 (316)
T ss_dssp CSSTTCCCSHHHHHH---------HHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCCcccchhHHHHHH---------hccCccCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhh
Confidence 999765432221111 111222334555677899999999999999999999999999988653
No 137
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=1.3e-39 Score=353.59 Aligned_cols=265 Identities=22% Similarity=0.289 Sum_probs=211.3
Q ss_pred HcCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCCh-hhHHHHHHHHHHHHhccCCcccceeeeeecCC--cEEEE
Q 003158 510 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEG--EQMLV 585 (843)
Q Consensus 510 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~--~~~lV 585 (843)
.++|.+.+.||+|+||+||+|... +++.||||++..... ...+.+.+|++++++++||||+++++++...+ ..++|
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv 87 (319)
T 4euu_A 8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLI 87 (319)
T ss_dssp SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEE
T ss_pred CCCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEE
Confidence 357889999999999999999975 589999999975432 33567889999999999999999999987654 78999
Q ss_pred EecCCCCCHHHHHhhcCC-CCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEE----cCCCcEEEeeccccc
Q 003158 586 YEFMSNGTLRDQLSAKSK-EPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILL----DHKFTAKVADFGLSR 660 (843)
Q Consensus 586 ~e~~~~gsL~~~l~~~~~-~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl----~~~~~~kl~DfGla~ 660 (843)
|||+++|+|.+++..... ..+++..++.++.||++||+|||+.+ |+||||||+||++ +.++.+||+|||+++
T Consensus 88 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~ 164 (319)
T 4euu_A 88 MEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENG---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAR 164 (319)
T ss_dssp EECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEECTTSCEEEEECCCTTCE
T ss_pred EeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCCHHHEEEeccCCCCceEEEccCCCce
Confidence 999999999999976432 34899999999999999999999999 9999999999999 888899999999998
Q ss_pred cCCCCCCCCcccceeeeeecccCCccCchhcc--------cCCCCchhhhHHHHHHHHHHHhCCCCCCCCcc---hHHHH
Q 003158 661 LAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFL--------THKLTDKSDVYSLGVVFLELLTGMQPISHGKN---IVREV 729 (843)
Q Consensus 661 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~--------~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~---~~~~~ 729 (843)
...... ......||+.|+|||++. +..++.++|||||||++|||++|+.||..... .....
T Consensus 165 ~~~~~~--------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~ 236 (319)
T 4euu_A 165 ELEDDE--------QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVM 236 (319)
T ss_dssp ECCTTC--------CBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHH
T ss_pred ecCCCC--------ceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHH
Confidence 764322 123456899999999986 57789999999999999999999999964322 12222
Q ss_pred HHHhhccc---chhh---------cc---CCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHh
Q 003158 730 NIAYQSSM---MFSV---------ID---GNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 785 (843)
Q Consensus 730 ~~~~~~~~---~~~~---------~~---~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~ 785 (843)
........ +..+ .. +.....+......+.+++.+|++.||++||++.++++...+.
T Consensus 237 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~ 307 (319)
T 4euu_A 237 YKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDI 307 (319)
T ss_dssp HHHHHHCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHH
T ss_pred HHHhcCCCcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHH
Confidence 21111100 0000 00 111234678888999999999999999999999999887764
No 138
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=1.5e-40 Score=371.83 Aligned_cols=196 Identities=24% Similarity=0.363 Sum_probs=162.7
Q ss_pred cCCCCC-CcccccCCeeEEEEEeC-CCcEEEEEEeccCChhhHHHHHHHHHHHHh-ccCCcccceeeeeec----CCcEE
Q 003158 511 NNFNSS-TQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSR-LHHRNLVSLVGYCDE----EGEQM 583 (843)
Q Consensus 511 ~~~~~~-~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~-l~h~nIv~l~~~~~~----~~~~~ 583 (843)
++|.+. +.||+|+||+||+|... +++.||||++... ..+.+|++++.+ .+||||+++++++.. .+..+
T Consensus 61 ~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~-----~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~ 135 (400)
T 1nxk_A 61 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLL 135 (400)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred ccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcc-----hhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEE
Confidence 456665 68999999999999965 6899999998642 356788888744 589999999999865 56789
Q ss_pred EEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcC---CCcEEEeeccccc
Q 003158 584 LVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDH---KFTAKVADFGLSR 660 (843)
Q Consensus 584 lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~---~~~~kl~DfGla~ 660 (843)
+||||+++|+|.+++.......+++..++.++.||+.||.|||+.+ |+||||||+|||++. ++.+||+|||+++
T Consensus 136 lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~ 212 (400)
T 1nxk_A 136 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGFAK 212 (400)
T ss_dssp EEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESSSSTTCCEEECCCTTCE
T ss_pred EEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCcCcceEEEecCCCCccEEEEeccccc
Confidence 9999999999999998766667999999999999999999999999 999999999999998 7899999999998
Q ss_pred cCCCCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCC
Q 003158 661 LAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 722 (843)
Q Consensus 661 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~ 722 (843)
..... .......||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 213 ~~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~ 266 (400)
T 1nxk_A 213 ETTSH--------NSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSN 266 (400)
T ss_dssp ECC-------------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCC
T ss_pred ccCCC--------CccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCC
Confidence 65421 1224456899999999999999999999999999999999999999754
No 139
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.3e-41 Score=371.51 Aligned_cols=202 Identities=27% Similarity=0.345 Sum_probs=172.2
Q ss_pred HcCCCCCCcccccCCeeEEEEEe----CCCcEEEEEEeccCC----hhhHHHHHHHHHHHHhc-cCCcccceeeeeecCC
Q 003158 510 TNNFNSSTQIGQGGYGKVYKGIL----PDGTVVAVKRAQEGS----LQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEG 580 (843)
Q Consensus 510 ~~~~~~~~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~ 580 (843)
.++|++.+.||+|+||+||+|+. .+++.||||+++... ....+.+.+|+++++.+ +||||+++++++...+
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 132 (355)
T 1vzo_A 53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET 132 (355)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT
T ss_pred ccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCc
Confidence 35799999999999999999997 368999999987432 12234677899999999 6999999999999999
Q ss_pred cEEEEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccc
Q 003158 581 EQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSR 660 (843)
Q Consensus 581 ~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~ 660 (843)
..++||||+++|+|.+++.... .+++..++.++.||++||.|||+++ |+||||||+|||++.++.+||+|||+++
T Consensus 133 ~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~DfG~a~ 207 (355)
T 1vzo_A 133 KLHLILDYINGGELFTHLSQRE--RFTEHEVQIYVGEIVLALEHLHKLG---IIYRDIKLENILLDSNGHVVLTDFGLSK 207 (355)
T ss_dssp EEEEEECCCCSCBHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEESCSSEEE
T ss_pred eEEEEeecCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCcEEEeeCCCCe
Confidence 9999999999999999997653 4889999999999999999999999 9999999999999999999999999998
Q ss_pred cCCCCCCCCcccceeeeeecccCCccCchhccc--CCCCchhhhHHHHHHHHHHHhCCCCCCCC
Q 003158 661 LAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT--HKLTDKSDVYSLGVVFLELLTGMQPISHG 722 (843)
Q Consensus 661 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~sDvwS~G~~l~elltg~~pf~~~ 722 (843)
...... ........||+.|+|||++.+ ..++.++|||||||++|||++|+.||...
T Consensus 208 ~~~~~~------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~ 265 (355)
T 1vzo_A 208 EFVADE------TERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVD 265 (355)
T ss_dssp ECCGGG------GGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCT
T ss_pred ecccCC------CCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccC
Confidence 653211 112234569999999999986 34788999999999999999999999643
No 140
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=1.6e-40 Score=370.18 Aligned_cols=281 Identities=21% Similarity=0.326 Sum_probs=202.5
Q ss_pred HHHHcCCCCCCcccccCCeeEEEEEe-CCCcEEEEEEeccCChhhHHHHHHHHHHHHhccCCcccceeeeeec-------
Q 003158 507 ALATNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDE------- 578 (843)
Q Consensus 507 ~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~------- 578 (843)
....++|++.+.||+|+||+||+|.. .+|+.||||++..... ...+|+++++.++||||+++++++..
T Consensus 3 ~~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~----~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~ 78 (383)
T 3eb0_A 3 ETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR----YKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPK 78 (383)
T ss_dssp ---CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT----SCCHHHHHHTTCCCTTBCCEEEEEEEC------
T ss_pred ccccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc----hHHHHHHHHHHcCCCCccchhheeeecCccccc
Confidence 34567899999999999999999996 5799999999875422 23469999999999999999999843
Q ss_pred -------------------------------CCcEEEEEecCCCCCHHHHHhh--cCCCCcchhHHHHHHHHHHHHHHHH
Q 003158 579 -------------------------------EGEQMLVYEFMSNGTLRDQLSA--KSKEPLGFAMRLSIALGSSRGILYL 625 (843)
Q Consensus 579 -------------------------------~~~~~lV~e~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~~ia~aL~yL 625 (843)
....++||||++ |+|.+.+.. .....+++..++.++.||++||+||
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~L 157 (383)
T 3eb0_A 79 PPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFI 157 (383)
T ss_dssp -------------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 234889999997 688888764 3445689999999999999999999
Q ss_pred hcCCCCCEEeccCCCCcEEEc-CCCcEEEeeccccccCCCCCCCCcccceeeeeecccCCccCchhcccC-CCCchhhhH
Q 003158 626 HTEADPPVFHRDIKASNILLD-HKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTH-KLTDKSDVY 703 (843)
Q Consensus 626 H~~~~~~iiH~Dlkp~NILl~-~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvw 703 (843)
|+++ |+||||||+||+++ .++.+||+|||+|+...... ......||+.|+|||++.+. .++.++|||
T Consensus 158 H~~g---i~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~--------~~~~~~~t~~y~aPE~~~~~~~~~~~~Diw 226 (383)
T 3eb0_A 158 HSLG---ICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSE--------PSVAYICSRFYRAPELMLGATEYTPSIDLW 226 (383)
T ss_dssp HTTT---EECSCCCGGGEEEETTTTEEEECCCTTCEECCTTS--------CCCCCCCCSSCCCHHHHTTCSSCCTHHHHH
T ss_pred HHCc---CccCccCHHHEEEcCCCCcEEEEECCCCcccCCCC--------CCcCcccCCCccCHHHhcCCCCCCcchhhh
Confidence 9999 99999999999998 68899999999998654321 22345689999999999875 489999999
Q ss_pred HHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhccCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 003158 704 SLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELE 783 (843)
Q Consensus 704 S~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~ 783 (843)
|+||++|||++|+.||........ ...... . .+..+.+..... .-......-|.... .
T Consensus 227 slG~il~ell~g~~pf~~~~~~~~-~~~i~~------~----~g~p~~~~~~~~------~~~~~~~~~~~~~~-----~ 284 (383)
T 3eb0_A 227 SIGCVFGELILGKPLFSGETSIDQ-LVRIIQ------I----MGTPTKEQMIRM------NPHYTEVRFPTLKA-----K 284 (383)
T ss_dssp HHHHHHHHHHHSSCSSCCSSHHHH-HHHHHH------H----HCCCCHHHHHHH------CTTC--CCCCCCCC-----C
T ss_pred hHHHHHHHHHhCCCCCCCCChHHH-HHHHHH------H----hCCCCHHHHHHh------CcccccccCCccCc-----c
Confidence 999999999999999976543222 111110 0 011111111100 00000000000000 0
Q ss_pred HhhhhCCC-CCCCCCccccCCCCCCCCCCCCCccCCCCCcccC
Q 003158 784 SIWNMMPE-SDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSS 825 (843)
Q Consensus 784 ~~~~~~~~-~~~~~~dll~~~L~~dp~~R~sa~e~L~Hp~f~~ 825 (843)
.+...++. ..+.+.+|+.+||++||++|+|++|+|+||||+.
T Consensus 285 ~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~ 327 (383)
T 3eb0_A 285 DWRKILPEGTPSLAIDLLEQILRYEPDLRINPYEAMAHPFFDH 327 (383)
T ss_dssp CHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGHH
T ss_pred cHHhhCCCCCCHHHHHHHHHHccCChhhCCCHHHHhcCHHHHH
Confidence 01111122 2344568999999999999999999999999964
No 141
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=2.9e-40 Score=360.93 Aligned_cols=266 Identities=24% Similarity=0.384 Sum_probs=216.7
Q ss_pred HHHHHHcCCCCCCcccccCCeeEEEEEeCC------CcEEEEEEeccCCh-hhHHHHHHHHHHHHhc-cCCcccceeeee
Q 003158 505 EMALATNNFNSSTQIGQGGYGKVYKGILPD------GTVVAVKRAQEGSL-QGEKEFLTEIQFLSRL-HHRNLVSLVGYC 576 (843)
Q Consensus 505 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~------~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~nIv~l~~~~ 576 (843)
++....++|++.+.||+|+||+||+|.... ...||+|++..... ...+.+.+|+++++.+ +||||+++++++
T Consensus 40 ~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~ 119 (333)
T 2i1m_A 40 KWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGAC 119 (333)
T ss_dssp GGBCCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred cccCCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEE
Confidence 455567889999999999999999999642 24899999976433 3456789999999999 899999999999
Q ss_pred ecCCcEEEEEecCCCCCHHHHHhhcC------------CCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEE
Q 003158 577 DEEGEQMLVYEFMSNGTLRDQLSAKS------------KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNIL 644 (843)
Q Consensus 577 ~~~~~~~lV~e~~~~gsL~~~l~~~~------------~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NIL 644 (843)
.+.+..++||||+++|+|.+++.... ...+++..++.++.|++.||+|||+++ |+||||||+||+
T Consensus 120 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~NIl 196 (333)
T 2i1m_A 120 THGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKN---CIHRDVAARNVL 196 (333)
T ss_dssp CSSSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGCE
T ss_pred ecCCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCC---cccCCcccceEE
Confidence 99999999999999999999997532 345789999999999999999999999 999999999999
Q ss_pred EcCCCcEEEeeccccccCCCCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHh-CCCCCCCCc
Q 003158 645 LDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGK 723 (843)
Q Consensus 645 l~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~ellt-g~~pf~~~~ 723 (843)
++.++.+||+|||+++....... ........+|+.|+|||.+.+..++.++|||||||++|||+| |..||....
T Consensus 197 ~~~~~~~kl~Dfg~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~ 271 (333)
T 2i1m_A 197 LTNGHVAKIGDFGLARDIMNDSN-----YIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGIL 271 (333)
T ss_dssp EEGGGEEEBCCCGGGCCGGGCTT-----SEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCC
T ss_pred ECCCCeEEECccccccccccccc-----eeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccc
Confidence 99999999999999986543221 112234457889999999999999999999999999999999 999997644
Q ss_pred chHHHHHHHhhcccchhhccCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhh
Q 003158 724 NIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWN 787 (843)
Q Consensus 724 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~ 787 (843)
........ . ..+.....+..+++.+.+++..||+.+|.+||++.++++.|+.+..
T Consensus 272 ~~~~~~~~-~--------~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~ 326 (333)
T 2i1m_A 272 VNSKFYKL-V--------KDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQ 326 (333)
T ss_dssp SSHHHHHH-H--------HHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred hhHHHHHH-H--------hcCCCCCCCCCCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHHHH
Confidence 32221111 0 1111222344556788999999999999999999999999998754
No 142
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=4e-40 Score=356.50 Aligned_cols=270 Identities=26% Similarity=0.440 Sum_probs=209.4
Q ss_pred HHHHHHHcCCCCCCcccccCCeeEEEEEeC----CCcEEEEEEeccCC--hhhHHHHHHHHHHHHhccCCcccceeeeee
Q 003158 504 GEMALATNNFNSSTQIGQGGYGKVYKGILP----DGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCD 577 (843)
Q Consensus 504 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~ 577 (843)
+++....++|.+.+.||+|+||.||+|... .++.||+|++.... ....+.+.+|++++++++||||+++++++.
T Consensus 27 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~ 106 (313)
T 3brb_A 27 EDVVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCI 106 (313)
T ss_dssp TTTBCCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEE
T ss_pred HhcccCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEe
Confidence 344455678999999999999999999853 34589999987542 333567899999999999999999999997
Q ss_pred cCC-----cEEEEEecCCCCCHHHHHhh----cCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCC
Q 003158 578 EEG-----EQMLVYEFMSNGTLRDQLSA----KSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHK 648 (843)
Q Consensus 578 ~~~-----~~~lV~e~~~~gsL~~~l~~----~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~ 648 (843)
+.+ ..++||||+++|+|.+++.. .....+++..++.++.|+++||.|||+++ |+||||||+||+++.+
T Consensus 107 ~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dikp~NIli~~~ 183 (313)
T 3brb_A 107 EMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRN---FLHRDLAARNCMLRDD 183 (313)
T ss_dssp C-------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTTT---CCCCCCSGGGEEECTT
T ss_pred eccccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCcceEEEcCC
Confidence 654 35999999999999999854 23456899999999999999999999998 9999999999999999
Q ss_pred CcEEEeeccccccCCCCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHh-CCCCCCCCcchHH
Q 003158 649 FTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVR 727 (843)
Q Consensus 649 ~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~ellt-g~~pf~~~~~~~~ 727 (843)
+.+||+|||+++....... ........+++.|+|||.+.+..++.++|||||||++|||++ |..||........
T Consensus 184 ~~~kl~Dfg~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~ 258 (313)
T 3brb_A 184 MTVCVADFGLSKKIYSGDY-----YRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEM 258 (313)
T ss_dssp SCEEECSCSCC---------------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGH
T ss_pred CcEEEeecCcceecccccc-----cCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHHHH
Confidence 9999999999986543221 112234457889999999999999999999999999999999 8888875543211
Q ss_pred HHHHHhhcccchhhccCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCC
Q 003158 728 EVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPE 791 (843)
Q Consensus 728 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~ 791 (843)
...+..+.....+..+++.+.+++..||..+|.+||++.++++.|+++.+..|+
T Consensus 259 ----------~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~~lp~ 312 (313)
T 3brb_A 259 ----------YDYLLHGHRLKQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLESLPD 312 (313)
T ss_dssp ----------HHHHHTTCCCCCBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHC--
T ss_pred ----------HHHHHcCCCCCCCccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcCC
Confidence 112223333445666778899999999999999999999999999999887653
No 143
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00 E-value=8e-41 Score=374.41 Aligned_cols=198 Identities=22% Similarity=0.277 Sum_probs=172.1
Q ss_pred HcCCCCCCcccccCCeeEEEEEe-CCCcEEEEEEeccCChhhHHHHHHHHHHHHhcc--------CCcccceeeeee---
Q 003158 510 TNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLH--------HRNLVSLVGYCD--- 577 (843)
Q Consensus 510 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~--------h~nIv~l~~~~~--- 577 (843)
.++|++.+.||+|+||+||+|+. .+++.||||++... ....+.+.+|+++++.++ |+||+++++++.
T Consensus 36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~ 114 (397)
T 1wak_A 36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA-EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISG 114 (397)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEE
T ss_pred CCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC-CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecC
Confidence 46899999999999999999996 46899999999753 334567889999999986 788999999987
Q ss_pred -cCCcEEEEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcC-CCCCEEeccCCCCcEEEcCCC------
Q 003158 578 -EEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTE-ADPPVFHRDIKASNILLDHKF------ 649 (843)
Q Consensus 578 -~~~~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~-~~~~iiH~Dlkp~NILl~~~~------ 649 (843)
.....++||||+ +++|.+++.......+++..++.++.||++||+|||++ + |+||||||+|||++.++
T Consensus 115 ~~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~g---ivHrDikp~NIll~~~~~~~~~~ 190 (397)
T 1wak_A 115 VNGTHICMVFEVL-GHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCR---IIHTDIKPENILLSVNEQYIRRL 190 (397)
T ss_dssp TTEEEEEEEECCC-CCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTC---EECCCCSGGGEEECCCHHHHHHH
T ss_pred CCCceEEEEEecc-CccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHeeEeccchhhhhh
Confidence 556889999999 67787777666556799999999999999999999998 8 99999999999999775
Q ss_pred -------------------------------------------cEEEeeccccccCCCCCCCCcccceeeeeecccCCcc
Q 003158 650 -------------------------------------------TAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYL 686 (843)
Q Consensus 650 -------------------------------------------~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ 686 (843)
.+||+|||+++..... .....||+.|+
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~----------~~~~~gt~~y~ 260 (397)
T 1wak_A 191 AAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH----------FTEDIQTRQYR 260 (397)
T ss_dssp HHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC----------SCSCCSCGGGC
T ss_pred hhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc----------CccCCCCCccc
Confidence 7999999999865421 23346899999
Q ss_pred CchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCC
Q 003158 687 DPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 722 (843)
Q Consensus 687 aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~ 722 (843)
|||++.+..++.++|||||||++|||++|+.||...
T Consensus 261 aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~ 296 (397)
T 1wak_A 261 SLEVLIGSGYNTPADIWSTACMAFELATGDYLFEPH 296 (397)
T ss_dssp CHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSCCCC
T ss_pred CChhhcCCCCCcHHHHHHHHHHHHHHhhCCCCCCCC
Confidence 999999999999999999999999999999999754
No 144
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=3.7e-40 Score=365.47 Aligned_cols=285 Identities=21% Similarity=0.321 Sum_probs=204.6
Q ss_pred HcCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCC--hhhHHHHHHHHHHHHhccCCcccceeeeeecCC------
Q 003158 510 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEG------ 580 (843)
Q Consensus 510 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~------ 580 (843)
.++|++.+.||+|+||+||+|... +++.||||++.... ....+.+.+|+.+++.++||||+++++++...+
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 103 (371)
T 2xrw_A 24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ 103 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCC
T ss_pred hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeecccccccccc
Confidence 367999999999999999999964 68999999987532 334567889999999999999999999997654
Q ss_pred cEEEEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccc
Q 003158 581 EQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSR 660 (843)
Q Consensus 581 ~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~ 660 (843)
..++||||++ |+|.+++.. .+++..+..++.||++||+|||+++ |+||||||+|||++.++.+||+|||+++
T Consensus 104 ~~~lv~e~~~-~~l~~~~~~----~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~ 175 (371)
T 2xrw_A 104 DVYIVMELMD-ANLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR 175 (371)
T ss_dssp EEEEEEECCS-EEHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECCCCC--
T ss_pred ceEEEEEcCC-CCHHHHHhh----ccCHHHHHHHHHHHHHHHHHHHHCC---eecccCCHHHEEEcCCCCEEEEEeeccc
Confidence 6899999996 588888853 3788999999999999999999999 9999999999999999999999999998
Q ss_pred cCCCCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchh
Q 003158 661 LAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFS 740 (843)
Q Consensus 661 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~ 740 (843)
..... .......||+.|+|||++.+..++.++|||||||++|||++|+.||........ ....
T Consensus 176 ~~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~-~~~i-------- 238 (371)
T 2xrw_A 176 TAGTS--------FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQ-WNKV-------- 238 (371)
T ss_dssp ----------------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHHH--------
T ss_pred ccccc--------cccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHH--------
Confidence 65321 122345789999999999999999999999999999999999999976554322 2211
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHhcccCCCCC-CCHHHHHHHHHHhhhhCCCC-------CCCCCccccCCCCCCCCCCC
Q 003158 741 VIDGNMGSYPSECVEKFIKLALKCCQDETDAR-PSMSEVMRELESIWNMMPES-------DTKTPEFINSEHTSKEETPP 812 (843)
Q Consensus 741 ~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~R-Ps~~~vl~~L~~~~~~~~~~-------~~~~~dll~~~L~~dp~~R~ 812 (843)
+ ...+....+....+...+.......|... .++.++.. .. .++.. ...+.+|+.+||+.||++||
T Consensus 239 -~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~--~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~ 311 (371)
T 2xrw_A 239 -I-EQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFP---DV--LFPADSEHNKLKASQARDLLSKMLVIDASKRI 311 (371)
T ss_dssp -H-C-CCCCCHHHHTTSCHHHHHHHHSSCCCCCCCHHHHSC---GG--GSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSC
T ss_pred -H-HHhCCCCHHHHHHhhhHHHHHHhhCccccccchhhhcc---cc--cCcccccccccccHHHHHHHHHHCcCChhhCC
Confidence 1 11222233333322222222222222211 12221110 00 00100 12345899999999999999
Q ss_pred CCccCCCCCcccCC
Q 003158 813 SSSSMLKHPYVSSD 826 (843)
Q Consensus 813 sa~e~L~Hp~f~~~ 826 (843)
|++|+|+||||+..
T Consensus 312 t~~e~l~hp~~~~~ 325 (371)
T 2xrw_A 312 SVDEALQHPYINVW 325 (371)
T ss_dssp CHHHHHHSHHHHTT
T ss_pred CHHHHhCCcchhhh
Confidence 99999999999753
No 145
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=4.9e-40 Score=349.35 Aligned_cols=257 Identities=27% Similarity=0.447 Sum_probs=183.9
Q ss_pred cCCCCCCcccccCCeeEEEEEe-CCCcEEEEEEeccCCh---hhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEE
Q 003158 511 NNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 586 (843)
Q Consensus 511 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~ 586 (843)
++|++.+.||+|+||.||+|.. .+++.||||++..... ...+.+.+|+++++.++||||+++++++.+.+..++||
T Consensus 11 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 90 (278)
T 3cok_A 11 EDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLVL 90 (278)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEEE
T ss_pred ccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEEE
Confidence 5788899999999999999996 4799999999874322 12467899999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCC
Q 003158 587 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 666 (843)
Q Consensus 587 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~ 666 (843)
||+++++|.+++... ..++++..++.++.|+++||+|||+++ |+||||||+||+++.++.+||+|||++.......
T Consensus 91 e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~ 166 (278)
T 3cok_A 91 EMCHNGEMNRYLKNR-VKPFSENEARHFMHQIITGMLYLHSHG---ILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPH 166 (278)
T ss_dssp ECCTTEEHHHHHHTC-SSCCCHHHHHHHHHHHHHHHHHHHHTT---EECSSCCGGGEEECTTCCEEECCCTTCEECC---
T ss_pred ecCCCCcHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCCEEEEeecceeeccCCC
Confidence 999999999999754 346899999999999999999999999 9999999999999999999999999998654321
Q ss_pred CCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhccCCC
Q 003158 667 IEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNM 746 (843)
Q Consensus 667 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 746 (843)
.......||+.|+|||.+.+..++.++|||||||++|||++|+.||........ ........
T Consensus 167 -------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~----------~~~~~~~~- 228 (278)
T 3cok_A 167 -------EKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNT----------LNKVVLAD- 228 (278)
T ss_dssp --------------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC---------------CCSSC-
T ss_pred -------CcceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHH----------HHHHhhcc-
Confidence 112335689999999999998999999999999999999999999975432100 00000000
Q ss_pred CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCCCCccCCCCCcccCC
Q 003158 747 GSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSSD 826 (843)
Q Consensus 747 ~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~sa~e~L~Hp~f~~~ 826 (843)
...|.. ......+++.+||..||++|||++|+++||||...
T Consensus 229 ~~~~~~---------------------------------------~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~ 269 (278)
T 3cok_A 229 YEMPSF---------------------------------------LSIEAKDLIHQLLRRNPADRLSLSSVLDHPFMSRN 269 (278)
T ss_dssp CCCCTT---------------------------------------SCHHHHHHHHHHSCSSGGGSCCHHHHTTSTTTC--
T ss_pred cCCccc---------------------------------------cCHHHHHHHHHHcccCHhhCCCHHHHhcCccccCC
Confidence 000110 11122367788888999999999999999999765
Q ss_pred CC
Q 003158 827 VS 828 (843)
Q Consensus 827 ~~ 828 (843)
..
T Consensus 270 ~~ 271 (278)
T 3cok_A 270 SS 271 (278)
T ss_dssp --
T ss_pred CC
Confidence 43
No 146
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=1.4e-40 Score=361.53 Aligned_cols=269 Identities=26% Similarity=0.448 Sum_probs=220.2
Q ss_pred ccHHHHHHHHcCCCCCCcccccCCeeEEEEEeC------CCcEEEEEEeccCCh-hhHHHHHHHHHHHHhccCCccccee
Q 003158 501 FTYGEMALATNNFNSSTQIGQGGYGKVYKGILP------DGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLV 573 (843)
Q Consensus 501 ~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~l~ 573 (843)
+..+++....++|++.+.||+|+||.||+|... +++.||||++..... ....++.+|+++++.++||||++++
T Consensus 15 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~ 94 (322)
T 1p4o_A 15 YVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLL 94 (322)
T ss_dssp CCCCTTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEE
T ss_pred cChhhhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeE
Confidence 344556667889999999999999999999854 378899999975433 3456789999999999999999999
Q ss_pred eeeecCCcEEEEEecCCCCCHHHHHhhcC--------CCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEE
Q 003158 574 GYCDEEGEQMLVYEFMSNGTLRDQLSAKS--------KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILL 645 (843)
Q Consensus 574 ~~~~~~~~~~lV~e~~~~gsL~~~l~~~~--------~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl 645 (843)
+++.+.+..++||||+++|+|.+++.... ..++++..++.++.|+++||.|||+++ |+||||||+||++
T Consensus 95 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dikp~NIli 171 (322)
T 1p4o_A 95 GVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMV 171 (322)
T ss_dssp EEECSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTT---CBCSCCSGGGEEE
T ss_pred EEEccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHCC---CccCCCccceEEE
Confidence 99999999999999999999999997532 245688999999999999999999999 9999999999999
Q ss_pred cCCCcEEEeeccccccCCCCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHh-CCCCCCCCcc
Q 003158 646 DHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKN 724 (843)
Q Consensus 646 ~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~ellt-g~~pf~~~~~ 724 (843)
+.++.+||+|||+++....... ........+|+.|+|||++.+..++.++|||||||++|||++ |+.||.....
T Consensus 172 ~~~~~~kl~Dfg~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~ 246 (322)
T 1p4o_A 172 AEDFTVKIGDFGMTRDIYETDY-----YRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN 246 (322)
T ss_dssp CTTCCEEECCTTCCCGGGGGGC-----EEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCH
T ss_pred cCCCeEEECcCccccccccccc-----cccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCH
Confidence 9999999999999976532210 111223456889999999999999999999999999999999 8888875432
Q ss_pred hHHHHHHHhhcccchhhccCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhh
Q 003158 725 IVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWN 787 (843)
Q Consensus 725 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~ 787 (843)
..... .+..+.....+..++..+.+++.+||+.+|.+||++.++++.|++...
T Consensus 247 -~~~~~---------~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~ 299 (322)
T 1p4o_A 247 -EQVLR---------FVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME 299 (322)
T ss_dssp -HHHHH---------HHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSC
T ss_pred -HHHHH---------HHHcCCcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhc
Confidence 11111 122233344556677889999999999999999999999999987643
No 147
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=8.8e-40 Score=384.71 Aligned_cols=261 Identities=26% Similarity=0.428 Sum_probs=210.9
Q ss_pred CCCCCC-cccccCCeeEEEEEeC---CCcEEEEEEeccCCh-hhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEE
Q 003158 512 NFNSST-QIGQGGYGKVYKGILP---DGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 586 (843)
Q Consensus 512 ~~~~~~-~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~ 586 (843)
++.+.+ .||+|+||.||+|.+. ++..||||+++.... ...+++.+|+++|+.++||||+++++++.. +..++||
T Consensus 336 ~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~ 414 (613)
T 2ozo_A 336 NLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVM 414 (613)
T ss_dssp SEEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEE
T ss_pred ceeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEE
Confidence 333344 7999999999999864 467899999986432 346789999999999999999999999976 5699999
Q ss_pred ecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCC
Q 003158 587 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 666 (843)
Q Consensus 587 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~ 666 (843)
||+++|+|.+++... ...+++..++.++.||++||+|||+++ |+||||||+|||+++++.+||+|||+++......
T Consensus 415 E~~~~g~L~~~l~~~-~~~l~~~~~~~i~~qi~~~L~~LH~~~---iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~ 490 (613)
T 2ozo_A 415 EMAGGGPLHKFLVGK-REEIPVSNVAELLHQVSMGMKYLEEKN---FVHRNLAARNVLLVNRHYAKISDFGLSKALGADD 490 (613)
T ss_dssp ECCTTCBHHHHHTTC-TTTSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECCCSTTTTCC---
T ss_pred EeCCCCcHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHHHCC---EEcCcCCHHHEEEcCCCcEEEeeccCcccccCCC
Confidence 999999999999654 346899999999999999999999999 9999999999999999999999999998764322
Q ss_pred CCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHh-CCCCCCCCcchHHHHHHHhhcccchhhccCC
Q 003158 667 IEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGN 745 (843)
Q Consensus 667 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 745 (843)
.. ........+++.|+|||++.+..++.++|||||||++|||++ |+.||....... .. ..+..+.
T Consensus 491 ~~----~~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~-~~---------~~i~~~~ 556 (613)
T 2ozo_A 491 SY----YTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPE-VM---------AFIEQGK 556 (613)
T ss_dssp ---------------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHH-HH---------HHHHTTC
T ss_pred ce----eeeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHH-HH---------HHHHcCC
Confidence 10 111123346789999999999999999999999999999998 999997654321 11 1222333
Q ss_pred CCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCC
Q 003158 746 MGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPE 791 (843)
Q Consensus 746 ~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~ 791 (843)
....|..+++++.+++..||+.+|.+||++.++++.|+.+......
T Consensus 557 ~~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~~~~ 602 (613)
T 2ozo_A 557 RMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLAS 602 (613)
T ss_dssp CCCCCTTCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHHHHHHHSC
T ss_pred CCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHHhcc
Confidence 4456777889999999999999999999999999999998765433
No 148
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=6.3e-40 Score=352.68 Aligned_cols=256 Identities=23% Similarity=0.367 Sum_probs=202.2
Q ss_pred HcCCCCCCcccccCCeeEEEEEeCCCcEEEEEEeccCChhhHHHHHHHHHHHHh--ccCCcccceeeeeec----CCcEE
Q 003158 510 TNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSR--LHHRNLVSLVGYCDE----EGEQM 583 (843)
Q Consensus 510 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~h~nIv~l~~~~~~----~~~~~ 583 (843)
.++|++.+.||+|+||+||+|.. +++.||||++... ..+.+.+|.+++.. ++||||+++++++.. ....+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~ 82 (301)
T 3q4u_A 7 ARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSR---DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLW 82 (301)
T ss_dssp GGGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEE
T ss_pred cCcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEeccc---cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeE
Confidence 46899999999999999999988 6899999998642 34556667777766 799999999998644 34689
Q ss_pred EEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHh--------cCCCCCEEeccCCCCcEEEcCCCcEEEee
Q 003158 584 LVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLH--------TEADPPVFHRDIKASNILLDHKFTAKVAD 655 (843)
Q Consensus 584 lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH--------~~~~~~iiH~Dlkp~NILl~~~~~~kl~D 655 (843)
+||||+++|+|.++++. ..+++..++.++.|+++||+||| +.+ |+||||||+|||++.++.+||+|
T Consensus 83 lv~e~~~~g~L~~~l~~---~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~---ivH~Dlkp~Nill~~~~~~kl~D 156 (301)
T 3q4u_A 83 LITHYHEMGSLYDYLQL---TTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPA---IAHRDLKSKNILVKKNGQCCIAD 156 (301)
T ss_dssp EEECCCTTCBHHHHHTT---CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCE---EECSCCCGGGEEECTTSCEEECC
T ss_pred EehhhccCCCHHHHHhh---cccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCC---eecCCCChHhEEEcCCCCEEEee
Confidence 99999999999999954 35899999999999999999999 777 99999999999999999999999
Q ss_pred ccccccCCCCCCCCcccceeeeeecccCCccCchhcccC------CCCchhhhHHHHHHHHHHHhC----------CCCC
Q 003158 656 FGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTH------KLTDKSDVYSLGVVFLELLTG----------MQPI 719 (843)
Q Consensus 656 fGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~------~~~~~sDvwS~G~~l~elltg----------~~pf 719 (843)
||+|+........ .........||+.|+|||++.+. .++.++|||||||++|||++| +.||
T Consensus 157 fg~a~~~~~~~~~---~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf 233 (301)
T 3q4u_A 157 LGLAVMHSQSTNQ---LDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPF 233 (301)
T ss_dssp CTTCEEEETTTTE---EECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTT
T ss_pred CCCeeeccccccc---ccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccc
Confidence 9999765432210 01112234699999999999876 455789999999999999999 8888
Q ss_pred CCCcc---hHHHHHHHhhcccchhhccCCCCCC-----CHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHh
Q 003158 720 SHGKN---IVREVNIAYQSSMMFSVIDGNMGSY-----PSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 785 (843)
Q Consensus 720 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~ 785 (843)
..... ......... ......... +..++..+.+++.+||+.+|.+||++.++++.|+++
T Consensus 234 ~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i 300 (301)
T 3q4u_A 234 YDVVPNDPSFEDMRKVV-------CVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300 (301)
T ss_dssp TTTSCSSCCHHHHHHHH-------TTSCCCCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred cccCCCCcchhhhhHHH-------hccCCCCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence 64321 112121111 111112222 346788999999999999999999999999999875
No 149
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=2.9e-40 Score=352.55 Aligned_cols=252 Identities=23% Similarity=0.380 Sum_probs=198.4
Q ss_pred HHcCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCC--hhhHHHHHHHHHHHHhc-cCCcccceeeeeecCCcEEE
Q 003158 509 ATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQML 584 (843)
Q Consensus 509 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~l 584 (843)
..++|++.+.||+|+||+||+|... +++.||+|++.... .....++.+|+..+..+ +||||+++++++.+.+..++
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~l 88 (289)
T 1x8b_A 9 YTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLI 88 (289)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEE
T ss_pred ccchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEE
Confidence 3568999999999999999999975 79999999987542 33456788999999999 99999999999999999999
Q ss_pred EEecCCCCCHHHHHhhcC--CCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCC--------------
Q 003158 585 VYEFMSNGTLRDQLSAKS--KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHK-------------- 648 (843)
Q Consensus 585 V~e~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~-------------- 648 (843)
||||+++|+|.+++.... ...+++..++.++.||++||+|||+++ |+||||||+||+++.+
T Consensus 89 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~ 165 (289)
T 1x8b_A 89 QNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMS---LVHMDIKPSNIFISRTSIPNAASEEGDEDD 165 (289)
T ss_dssp EEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEC----------------
T ss_pred EEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhCC---EeecCCCHHHEEEcCCCCCccccccccccc
Confidence 999999999999997642 245899999999999999999999999 9999999999999844
Q ss_pred -----CcEEEeeccccccCCCCCCCCcccceeeeeecccCCccCchhcccC-CCCchhhhHHHHHHHHHHHhCCCCCCCC
Q 003158 649 -----FTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTH-KLTDKSDVYSLGVVFLELLTGMQPISHG 722 (843)
Q Consensus 649 -----~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwS~G~~l~elltg~~pf~~~ 722 (843)
..+||+|||.+....... ...||+.|+|||.+.+. .++.++|||||||++|||++|..++...
T Consensus 166 ~~~~~~~~kl~Dfg~~~~~~~~~-----------~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~ 234 (289)
T 1x8b_A 166 WASNKVMFKIGDLGHVTRISSPQ-----------VEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNG 234 (289)
T ss_dssp ----CCCEEECCCTTCEETTCSC-----------CCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSS
T ss_pred ccCCceEEEEcccccccccCCcc-----------ccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcch
Confidence 479999999998754321 23489999999999875 5678999999999999999998776433
Q ss_pred cchHHHHHHHhhcccchhhccCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccC
Q 003158 723 KNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINS 802 (843)
Q Consensus 723 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~ 802 (843)
... . .+..+.....+..++ ....+++.+
T Consensus 235 ~~~-~------------~~~~~~~~~~~~~~~---------------------------------------~~~~~li~~ 262 (289)
T 1x8b_A 235 DQW-H------------EIRQGRLPRIPQVLS---------------------------------------QEFTELLKV 262 (289)
T ss_dssp HHH-H------------HHHTTCCCCCSSCCC---------------------------------------HHHHHHHHH
T ss_pred hHH-H------------HHHcCCCCCCCcccC---------------------------------------HHHHHHHHH
Confidence 211 0 011111111111111 222356777
Q ss_pred CCCCCCCCCCCCccCCCCCcccCC
Q 003158 803 EHTSKEETPPSSSSMLKHPYVSSD 826 (843)
Q Consensus 803 ~L~~dp~~R~sa~e~L~Hp~f~~~ 826 (843)
||..||++|||++|+++||||.+.
T Consensus 263 ~l~~dp~~Rps~~~ll~h~~~~~~ 286 (289)
T 1x8b_A 263 MIHPDPERRPSAMALVKHSVLLSA 286 (289)
T ss_dssp HTCSSGGGSCCHHHHHTCTTC---
T ss_pred HhCCCcccCCCHHHHhhChHhhhh
Confidence 788888899999999999999864
No 150
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=1.4e-40 Score=374.61 Aligned_cols=260 Identities=23% Similarity=0.390 Sum_probs=195.6
Q ss_pred HHHcCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCCh--------hhHHHHHHHHHHHHhccCCcccceeeeeec
Q 003158 508 LATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL--------QGEKEFLTEIQFLSRLHHRNLVSLVGYCDE 578 (843)
Q Consensus 508 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~ 578 (843)
...++|.+.+.||+|+||+||+|... +++.||||++..... .....+.+|++++++++||||+++++++..
T Consensus 132 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~ 211 (419)
T 3i6u_A 132 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA 211 (419)
T ss_dssp HHHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEES
T ss_pred hhhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEec
Confidence 45689999999999999999999965 689999999875321 112357899999999999999999999864
Q ss_pred CCcEEEEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCC---cEEEee
Q 003158 579 EGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKF---TAKVAD 655 (843)
Q Consensus 579 ~~~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~---~~kl~D 655 (843)
+..++||||+++|+|.+++... ..+++..++.++.|+++||+|||+++ |+||||||+|||++.++ .+||+|
T Consensus 212 -~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~LH~~~---ivHrDlkp~NIll~~~~~~~~~kl~D 285 (419)
T 3i6u_A 212 -EDYYIVLELMEGGELFDKVVGN--KRLKEATCKLYFYQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITD 285 (419)
T ss_dssp -SEEEEEEECCTTCBGGGGTSSS--CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESSSSSSCCEEECC
T ss_pred -CceEEEEEcCCCCcHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCChHhEEEecCCCcceEEEee
Confidence 4589999999999999988654 45899999999999999999999999 99999999999997544 599999
Q ss_pred ccccccCCCCCCCCcccceeeeeecccCCccCchhccc---CCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHH
Q 003158 656 FGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT---HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIA 732 (843)
Q Consensus 656 fGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~ 732 (843)
||+|+..... .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||..........
T Consensus 286 FG~a~~~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~--- 354 (419)
T 3i6u_A 286 FGHSKILGET--------SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLK--- 354 (419)
T ss_dssp SSTTTSCC-------------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCCHH---
T ss_pred cccceecCCC--------ccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHHHH---
Confidence 9999875422 22344579999999999864 667889999999999999999999997543211000
Q ss_pred hhcccchhhccCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCC
Q 003158 733 YQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPP 812 (843)
Q Consensus 733 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~ 812 (843)
..+......++.+. ++.....+.+|+.+||..||++||
T Consensus 355 -------~~i~~~~~~~~~~~-----------------------------------~~~~~~~~~~li~~~L~~dP~~Rp 392 (419)
T 3i6u_A 355 -------DQITSGKYNFIPEV-----------------------------------WAEVSEKALDLVKKLLVVDPKARF 392 (419)
T ss_dssp -------HHHHTTCCCCCHHH-----------------------------------HTTSCHHHHHHHHHHSCSSTTTSC
T ss_pred -------HHHhcCCCCCCchh-----------------------------------hcccCHHHHHHHHHHccCChhHCc
Confidence 00000001111100 011223344788889999999999
Q ss_pred CCccCCCCCcccCC
Q 003158 813 SSSSMLKHPYVSSD 826 (843)
Q Consensus 813 sa~e~L~Hp~f~~~ 826 (843)
|++|+|+||||+..
T Consensus 393 s~~e~l~hp~~~~~ 406 (419)
T 3i6u_A 393 TTEEALRHPWLQDE 406 (419)
T ss_dssp CHHHHHHSGGGCCH
T ss_pred CHHHHhCCcccCCh
Confidence 99999999999764
No 151
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=8.4e-40 Score=354.80 Aligned_cols=269 Identities=27% Similarity=0.412 Sum_probs=214.5
Q ss_pred CCCCCcccccCCeeEEEEEeC-----CCcEEEEEEeccCCh-hhHHHHHHHHHHHHhccCCcccceeeeeecC--CcEEE
Q 003158 513 FNSSTQIGQGGYGKVYKGILP-----DGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE--GEQML 584 (843)
Q Consensus 513 ~~~~~~lg~G~~g~Vy~~~~~-----~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~--~~~~l 584 (843)
|++.+.||+|+||+||++.+. +++.||||++..... ...+.+.+|+++++.++||||+++++++.+. ...++
T Consensus 33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 112 (318)
T 3lxp_A 33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQL 112 (318)
T ss_dssp EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEE
T ss_pred HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEE
Confidence 388899999999999998752 588999999986432 3456789999999999999999999999764 57899
Q ss_pred EEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCC
Q 003158 585 VYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPV 664 (843)
Q Consensus 585 V~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~ 664 (843)
||||+++|+|.+++... .+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++.....
T Consensus 113 v~e~~~~~~L~~~l~~~---~~~~~~~~~i~~~l~~~l~~LH~~~---ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~ 186 (318)
T 3lxp_A 113 VMEYVPLGSLRDYLPRH---SIGLAQLLLFAQQICEGMAYLHAQH---YIHRDLAARNVLLDNDRLVKIGDFGLAKAVPE 186 (318)
T ss_dssp EECCCTTCBHHHHGGGS---CCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCGGGCEECCT
T ss_pred EEecccCCcHHHHHhhC---CCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCchheEEEcCCCCEEECCccccccccc
Confidence 99999999999999654 3889999999999999999999999 99999999999999999999999999987653
Q ss_pred CCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHH----Hhhcccchh
Q 003158 665 PDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNI----AYQSSMMFS 740 (843)
Q Consensus 665 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~----~~~~~~~~~ 740 (843)
... .........++..|+|||++.+..++.++|||||||++|||++|+.||............ ......+..
T Consensus 187 ~~~----~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (318)
T 3lxp_A 187 GHE----YYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTE 262 (318)
T ss_dssp TCS----EEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHH
T ss_pred ccc----ccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHH
Confidence 221 012233455788899999999999999999999999999999999998653221100000 000000111
Q ss_pred -hccCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCC
Q 003158 741 -VIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPE 791 (843)
Q Consensus 741 -~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~ 791 (843)
+........+..++..+.+++..||+.+|.+||++.++++.|+.+.+.+..
T Consensus 263 ~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~~~ 314 (318)
T 3lxp_A 263 LLERGERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHEKYQG 314 (318)
T ss_dssp HHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHHC
T ss_pred HHhcccCCCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHhhcc
Confidence 222333455677788999999999999999999999999999998876544
No 152
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=1.3e-39 Score=346.63 Aligned_cols=259 Identities=26% Similarity=0.445 Sum_probs=210.1
Q ss_pred HHcCCCCCCcccccCCeeEEEEEeCC----CcEEEEEEeccCC-hhhHHHHHHHHHHHHhccCCcccceeeeeecCCcEE
Q 003158 509 ATNNFNSSTQIGQGGYGKVYKGILPD----GTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQM 583 (843)
Q Consensus 509 ~~~~~~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~ 583 (843)
..++|.+.+.||+|+||+||+|.+.+ +..||+|++.... ....+.+.+|+++++.++||||+++++++.+ +..+
T Consensus 10 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~ 88 (281)
T 3cc6_A 10 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE-EPTW 88 (281)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS-SSCE
T ss_pred cccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCCE
Confidence 35688899999999999999998542 3469999988653 3446789999999999999999999999875 4568
Q ss_pred EEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCC
Q 003158 584 LVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAP 663 (843)
Q Consensus 584 lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~ 663 (843)
+||||+++++|.+++.... ..+++..++.++.|+++||.|||+++ |+||||||+||+++.++.+||+|||++....
T Consensus 89 ~v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 164 (281)
T 3cc6_A 89 IIMELYPYGELGHYLERNK-NSLKVLTLVLYSLQICKAMAYLESIN---CVHRDIAVRNILVASPECVKLGDFGLSRYIE 164 (281)
T ss_dssp EEEECCTTCBHHHHHHHHT-TTCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEEEETTEEEECCCCGGGCC-
T ss_pred EEEecCCCCCHHHHHHhcc-ccCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCccceEEECCCCcEEeCccCCCcccc
Confidence 9999999999999997643 45889999999999999999999999 9999999999999999999999999998654
Q ss_pred CCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHh-CCCCCCCCcchHHHHHHHhhcccchhhc
Q 003158 664 VPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVI 742 (843)
Q Consensus 664 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 742 (843)
... ........+++.|+|||.+.+..++.++|||||||++|||++ |+.||........ .. .+.
T Consensus 165 ~~~------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~~-~~---------~~~ 228 (281)
T 3cc6_A 165 DED------YYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDV-IG---------VLE 228 (281)
T ss_dssp --------------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGGH-HH---------HHH
T ss_pred ccc------ccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHHH-HH---------HHh
Confidence 322 111233457789999999999999999999999999999998 9999975433211 10 111
Q ss_pred cCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhh
Q 003158 743 DGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNM 788 (843)
Q Consensus 743 ~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~ 788 (843)
.+.....+..+++.+.+++.+||..+|.+||++.++++.|+.+...
T Consensus 229 ~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~ 274 (281)
T 3cc6_A 229 KGDRLPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQM 274 (281)
T ss_dssp HTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred cCCCCCCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHHHHHHh
Confidence 1222334556678899999999999999999999999999987653
No 153
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=3.3e-40 Score=355.62 Aligned_cols=201 Identities=24% Similarity=0.428 Sum_probs=174.8
Q ss_pred HHcCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCChhhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEEe
Q 003158 509 ATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 587 (843)
Q Consensus 509 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e 587 (843)
..++|.+.+.||+|+||+||+|... +|+.||+|++........+.+.+|+++++.++||||+++++++.+.+..++|||
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 86 (304)
T 2jam_A 7 IRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQ 86 (304)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred hhccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEE
Confidence 3567999999999999999999975 799999999986555455678999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEE---cCCCcEEEeeccccccCCC
Q 003158 588 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILL---DHKFTAKVADFGLSRLAPV 664 (843)
Q Consensus 588 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl---~~~~~~kl~DfGla~~~~~ 664 (843)
|+++++|.+++.... .+++..++.++.|++.||.|||+.+ |+||||||+||++ ++++.+||+|||++.....
T Consensus 87 ~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~ 161 (304)
T 2jam_A 87 LVSGGELFDRILERG--VYTEKDASLVIQQVLSAVKYLHENG---IVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQN 161 (304)
T ss_dssp CCCSCBHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHTT---CCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCC
T ss_pred cCCCccHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEEecCCCCCCEEEccCCcceecCC
Confidence 999999999987643 4889999999999999999999999 9999999999999 7889999999999975432
Q ss_pred CCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCc
Q 003158 665 PDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 723 (843)
Q Consensus 665 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~ 723 (843)
. ......||+.|+|||.+.+..++.++|||||||++|||++|+.||....
T Consensus 162 ~---------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~ 211 (304)
T 2jam_A 162 G---------IMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEET 211 (304)
T ss_dssp B---------TTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSC
T ss_pred C---------ccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCC
Confidence 1 1233468999999999999999999999999999999999999997543
No 154
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=6.2e-40 Score=363.14 Aligned_cols=263 Identities=31% Similarity=0.510 Sum_probs=202.5
Q ss_pred CCCCCCcccccCCeeEEEEEeC--CC--cEEEEEEeccCC-hhhHHHHHHHHHHHHhccCCcccceeeeee-cCCcEEEE
Q 003158 512 NFNSSTQIGQGGYGKVYKGILP--DG--TVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCD-EEGEQMLV 585 (843)
Q Consensus 512 ~~~~~~~lg~G~~g~Vy~~~~~--~~--~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~-~~~~~~lV 585 (843)
.|+..+.||+|+||+||+|.+. ++ ..||||.+.... ....+++.+|+.++++++||||+++++++. .++..++|
T Consensus 90 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv 169 (373)
T 3c1x_A 90 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVV 169 (373)
T ss_dssp EEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEE
T ss_pred eeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEE
Confidence 4666789999999999999863 22 468999987533 334578999999999999999999999875 45688999
Q ss_pred EecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCC
Q 003158 586 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVP 665 (843)
Q Consensus 586 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~ 665 (843)
|||+++|+|.+++... ...+++..++.++.||++||+|||+++ |+||||||+|||+++++.+||+|||+++.....
T Consensus 170 ~e~~~~g~L~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~ 245 (373)
T 3c1x_A 170 LPYMKHGDLRNFIRNE-THNPTVKDLIGFGLQVAKGMKFLASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDK 245 (373)
T ss_dssp EECCTTCBHHHHHHCT-TCCCBHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCEEECCC---------
T ss_pred EECCCCCCHHHHHhhc-ccCCCHHHHHHHHHHHHHHHHHHHHCC---EecCccchheEEECCCCCEEEeecccccccccc
Confidence 9999999999999654 345788999999999999999999999 999999999999999999999999999865432
Q ss_pred CCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHh-CCCCCCCCcchHHHHHHHhhcccchhhccC
Q 003158 666 DIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDG 744 (843)
Q Consensus 666 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 744 (843)
... .........+++.|+|||.+.+..++.++|||||||++|||++ |..||....... . ...+..+
T Consensus 246 ~~~---~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~-~---------~~~~~~~ 312 (373)
T 3c1x_A 246 EFD---SVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD-I---------TVYLLQG 312 (373)
T ss_dssp ---------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSC-H---------HHHHHTT
T ss_pred ccc---cccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHH-H---------HHHHHcC
Confidence 211 1112234457889999999999999999999999999999999 666775433211 1 1112223
Q ss_pred CCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCC
Q 003158 745 NMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPE 791 (843)
Q Consensus 745 ~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~ 791 (843)
.....|..++..+.+++.+||+.+|.+||++.++++.|+.+...+..
T Consensus 313 ~~~~~p~~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~~~~~~ 359 (373)
T 3c1x_A 313 RRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIG 359 (373)
T ss_dssp CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTCCS
T ss_pred CCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhccc
Confidence 33344666778899999999999999999999999999999876653
No 155
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=4.5e-40 Score=358.44 Aligned_cols=273 Identities=27% Similarity=0.389 Sum_probs=217.4
Q ss_pred HcCCCCCCcccccCCeeEEEEEe-----CCCcEEEEEEeccCChhhHHHHHHHHHHHHhccCCcccceeeeee--cCCcE
Q 003158 510 TNNFNSSTQIGQGGYGKVYKGIL-----PDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCD--EEGEQ 582 (843)
Q Consensus 510 ~~~~~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~--~~~~~ 582 (843)
.++|++.+.||+|+||.||+|.+ .+++.||||++........+.+.+|++++++++||||+++++++. +....
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 101 (327)
T 3lxl_A 22 ERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSL 101 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEE
T ss_pred hhhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceE
Confidence 46788999999999999999984 368899999998776666778999999999999999999999886 45678
Q ss_pred EEEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccC
Q 003158 583 MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLA 662 (843)
Q Consensus 583 ~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~ 662 (843)
++||||+++++|.+++.... ..+++..++.++.|+++||+|||+++ |+||||||+||+++.++.+||+|||+++..
T Consensus 102 ~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~ 177 (327)
T 3lxl_A 102 RLVMEYLPSGCLRDFLQRHR-ARLDASRLLLYSSQICKGMEYLGSRR---CVHRDLAARNILVESEAHVKIADFGLAKLL 177 (327)
T ss_dssp EEEEECCTTCBHHHHHHHHG-GGCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEETTEEEECCGGGCEEC
T ss_pred EEEEeecCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCChhhEEECCCCCEEEcccccceec
Confidence 99999999999999997643 35899999999999999999999999 999999999999999999999999999876
Q ss_pred CCCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHH-HH----hhccc
Q 003158 663 PVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVN-IA----YQSSM 737 (843)
Q Consensus 663 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~-~~----~~~~~ 737 (843)
...... ........||+.|+|||++.+..++.++|||||||++|||++|+.||........... .. .....
T Consensus 178 ~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 253 (327)
T 3lxl_A 178 PLDKDY----YVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRL 253 (327)
T ss_dssp CTTCSE----EECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHH
T ss_pred ccCCcc----ceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHH
Confidence 432210 1122334578889999999999999999999999999999999999864322110000 00 00001
Q ss_pred chhhccCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCC
Q 003158 738 MFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMP 790 (843)
Q Consensus 738 ~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~ 790 (843)
...+..+.....+..+++.+.+++..||+.+|.+||++.++++.|+.+.....
T Consensus 254 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~ 306 (327)
T 3lxl_A 254 LELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGSR 306 (327)
T ss_dssp HHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC-----
T ss_pred HHHhhcccCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhhc
Confidence 11222333445567788899999999999999999999999999999866443
No 156
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=2.4e-39 Score=345.70 Aligned_cols=254 Identities=31% Similarity=0.518 Sum_probs=207.1
Q ss_pred HcCCCCCCcccccCCeeEEEEEe-CCCcEEEEEEeccCChhh-------HHHHHHHHHHHHhccCCcccceeeeeecCCc
Q 003158 510 TNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQG-------EKEFLTEIQFLSRLHHRNLVSLVGYCDEEGE 581 (843)
Q Consensus 510 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~-------~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~ 581 (843)
.++|++.+.||+|+||+||+|.. .+++.||+|++....... .+++.+|++++++++||||+++++++.+..
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~- 96 (287)
T 4f0f_A 18 DNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP- 96 (287)
T ss_dssp STTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT-
T ss_pred hccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC-
Confidence 36788899999999999999996 478999999986533221 167899999999999999999999997654
Q ss_pred EEEEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCc-----EEEeec
Q 003158 582 QMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFT-----AKVADF 656 (843)
Q Consensus 582 ~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~-----~kl~Df 656 (843)
++||||+++|+|.+++... ..++++..++.++.|+++||+|||+++ ++|+||||||+||+++.++. +||+||
T Consensus 97 -~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~l~~~l~~lH~~~-~~ivH~dikp~Nil~~~~~~~~~~~~kl~Df 173 (287)
T 4f0f_A 97 -RMVMEFVPCGDLYHRLLDK-AHPIKWSVKLRLMLDIALGIEYMQNQN-PPIVHRDLRSPNIFLQSLDENAPVCAKVADF 173 (287)
T ss_dssp -EEEEECCTTCBHHHHHHCT-TSCCCHHHHHHHHHHHHHHHHHHHTSS-SCCBCSCCSGGGEEESCCCTTCSCCEEECCC
T ss_pred -eEEEEecCCCCHHHHHhcc-cCCccHHHHHHHHHHHHHHHHHHHhCC-CCeecCCCCcceEEEeccCCCCceeEEeCCC
Confidence 7999999999999988654 346899999999999999999999875 45999999999999988776 999999
Q ss_pred cccccCCCCCCCCcccceeeeeecccCCccCchhcc--cCCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhh
Q 003158 657 GLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFL--THKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQ 734 (843)
Q Consensus 657 Gla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~ 734 (843)
|+++.... ......||+.|+|||++. ...++.++|||||||++|||++|+.||..............
T Consensus 174 g~~~~~~~----------~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~- 242 (287)
T 4f0f_A 174 GLSQQSVH----------SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMI- 242 (287)
T ss_dssp TTCBCCSS----------CEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHHHHHH-
T ss_pred Cccccccc----------cccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHHHHHHH-
Confidence 99975321 234456999999999994 45678899999999999999999999976543221111111
Q ss_pred cccchhhccCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 003158 735 SSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELES 784 (843)
Q Consensus 735 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~ 784 (843)
.........+..+++.+.+++..||+.+|.+||++.++++.|++
T Consensus 243 ------~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ 286 (287)
T 4f0f_A 243 ------REEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSE 286 (287)
T ss_dssp ------HHSCCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHT
T ss_pred ------hccCCCCCCCcccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHh
Confidence 11122334566778899999999999999999999999999875
No 157
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=2e-39 Score=348.35 Aligned_cols=263 Identities=31% Similarity=0.487 Sum_probs=209.7
Q ss_pred cCCCCCCcccccCCeeEEEEEeCC----CcEEEEEEeccCC-hhhHHHHHHHHHHHHhccCCcccceeeee-ecCCcEEE
Q 003158 511 NNFNSSTQIGQGGYGKVYKGILPD----GTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYC-DEEGEQML 584 (843)
Q Consensus 511 ~~~~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~-~~~~~~~l 584 (843)
.+|++.+.||+|+||+||+|...+ +..||+|.+.... ....+.+.+|++++++++||||+++++++ ..++..++
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 104 (298)
T 3f66_A 25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLV 104 (298)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEE
T ss_pred eehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEE
Confidence 467888999999999999998642 2368999987543 33457889999999999999999999986 45668899
Q ss_pred EEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCC
Q 003158 585 VYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPV 664 (843)
Q Consensus 585 V~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~ 664 (843)
||||+++|+|.+++... ...+++..++.++.|+++||+|||+++ |+||||||+||++++++.+||+|||+++....
T Consensus 105 v~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~ql~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~ 180 (298)
T 3f66_A 105 VLPYMKHGDLRNFIRNE-THNPTVKDLIGFGLQVAKGMKYLASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYD 180 (298)
T ss_dssp EEECCTTCBHHHHHHCT-TCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECTTCCEEECSCGGGCCCSC
T ss_pred EEeCCCCCCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCchheEEECCCCCEEECcccccccccc
Confidence 99999999999999653 345788999999999999999999999 99999999999999999999999999986643
Q ss_pred CCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhC-CCCCCCCcchHHHHHHHhhcccchhhcc
Q 003158 665 PDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTG-MQPISHGKNIVREVNIAYQSSMMFSVID 743 (843)
Q Consensus 665 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg-~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 743 (843)
.... .........+|+.|+|||.+.+..++.++|||||||++|||++| ..||..... .+... .+..
T Consensus 181 ~~~~---~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~-~~~~~---------~~~~ 247 (298)
T 3f66_A 181 KEYY---SVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT-FDITV---------YLLQ 247 (298)
T ss_dssp GGGC---BC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCT-TTHHH---------HHHT
T ss_pred cchh---ccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCH-HHHHH---------HHhc
Confidence 2211 11223445678899999999999999999999999999999995 445543322 11111 1222
Q ss_pred CCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCC
Q 003158 744 GNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMP 790 (843)
Q Consensus 744 ~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~ 790 (843)
+.....+..++..+.+++..||+.+|.+||++.++++.|+++.+.+.
T Consensus 248 ~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~~ 294 (298)
T 3f66_A 248 GRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 294 (298)
T ss_dssp TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTSC
T ss_pred CCCCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhc
Confidence 23333455667789999999999999999999999999999987654
No 158
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.6e-39 Score=347.25 Aligned_cols=261 Identities=27% Similarity=0.437 Sum_probs=214.5
Q ss_pred HcCCCCCC-cccccCCeeEEEEEeC---CCcEEEEEEeccCC-hhhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEE
Q 003158 510 TNNFNSST-QIGQGGYGKVYKGILP---DGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQML 584 (843)
Q Consensus 510 ~~~~~~~~-~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~l 584 (843)
.++|.+.+ .||+|+||.||+|.+. +++.||||++.... ....+++.+|+++++.++||||+++++++ ..+..++
T Consensus 8 ~~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~l 86 (287)
T 1u59_A 8 RDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALML 86 (287)
T ss_dssp GGGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEE
T ss_pred HHHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEE
Confidence 34566666 8999999999999853 57889999998643 33457899999999999999999999999 4567999
Q ss_pred EEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCC
Q 003158 585 VYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPV 664 (843)
Q Consensus 585 V~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~ 664 (843)
||||+++++|.+++... ...+++..++.++.|+++||.|||+.+ |+||||||+||+++.++.+||+|||++.....
T Consensus 87 v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~ 162 (287)
T 1u59_A 87 VMEMAGGGPLHKFLVGK-REEIPVSNVAELLHQVSMGMKYLEEKN---FVHRDLAARNVLLVNRHYAKISDFGLSKALGA 162 (287)
T ss_dssp EEECCTTEEHHHHHTTC-TTTSCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEEETTEEEECCCTTCEECTT
T ss_pred EEEeCCCCCHHHHHHhC-CccCCHHHHHHHHHHHHHHHHHHHHCC---EeeCCCchheEEEcCCCCEEECcccceeeecc
Confidence 99999999999999653 345899999999999999999999999 99999999999999999999999999987643
Q ss_pred CCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHh-CCCCCCCCcchHHHHHHHhhcccchhhcc
Q 003158 665 PDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVID 743 (843)
Q Consensus 665 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 743 (843)
.... ........+|+.|+|||++.+..++.++|||||||++|||++ |+.||....... ... .+..
T Consensus 163 ~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~-~~~---------~i~~ 228 (287)
T 1u59_A 163 DDSY----YTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPE-VMA---------FIEQ 228 (287)
T ss_dssp CSCE----ECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHH-HHH---------HHHT
T ss_pred Ccce----eeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHH-HHH---------HHhc
Confidence 2210 111223346889999999998899999999999999999999 999997654321 111 1222
Q ss_pred CCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhC
Q 003158 744 GNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMM 789 (843)
Q Consensus 744 ~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~ 789 (843)
+.....+..+++.+.+++..||+.+|.+||++.++++.|+.+....
T Consensus 229 ~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~ 274 (287)
T 1u59_A 229 GKRMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSL 274 (287)
T ss_dssp TCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred CCcCCCCCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhc
Confidence 2334456677889999999999999999999999999999986643
No 159
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=3.6e-40 Score=363.02 Aligned_cols=270 Identities=15% Similarity=0.172 Sum_probs=209.8
Q ss_pred cCCCCCCcccccCCeeEEEEEeCC---------CcEEEEEEeccCChhhHHHHHHHHHHHHhccCCcccc----------
Q 003158 511 NNFNSSTQIGQGGYGKVYKGILPD---------GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVS---------- 571 (843)
Q Consensus 511 ~~~~~~~~lg~G~~g~Vy~~~~~~---------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~---------- 571 (843)
++|++.+.||+|+||+||+|.... ++.||||++... +.+.+|++++++++||||++
T Consensus 42 ~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 116 (352)
T 2jii_A 42 RQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTPL 116 (352)
T ss_dssp CEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCTT
T ss_pred CeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCCc
Confidence 678999999999999999999753 789999998753 36788999999999999998
Q ss_pred -----eeeeeec-CCcEEEEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEE
Q 003158 572 -----LVGYCDE-EGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILL 645 (843)
Q Consensus 572 -----l~~~~~~-~~~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl 645 (843)
+++++.. ++..++||||+ +++|.+++.......+++..++.++.||++||+|||+++ |+||||||+||++
T Consensus 117 ~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dikp~NIl~ 192 (352)
T 2jii_A 117 LAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHENE---YVHGNVTAENIFV 192 (352)
T ss_dssp CSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTT---CBCSCCCGGGEEE
T ss_pred cCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCCHHHEEE
Confidence 5666655 67889999999 999999998764467999999999999999999999999 9999999999999
Q ss_pred cCCC--cEEEeeccccccCCCCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCc
Q 003158 646 DHKF--TAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 723 (843)
Q Consensus 646 ~~~~--~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~ 723 (843)
+.++ .+||+|||+++....................||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 193 ~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~ 272 (352)
T 2jii_A 193 DPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNCL 272 (352)
T ss_dssp ETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGT
T ss_pred cCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcccCC
Confidence 9998 99999999998764322111101112234479999999999999999999999999999999999999997643
Q ss_pred chHHHHHHHhhc--ccchhhccCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCC
Q 003158 724 NIVREVNIAYQS--SMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPE 791 (843)
Q Consensus 724 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~ 791 (843)
............ .......... .....+++.+.+++..||+.+|.+||++.++++.|+.+.+....
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~~ 340 (352)
T 2jii_A 273 PNTEDIMKQKQKFVDKPGPFVGPC--GHWIRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEALLQDLRV 340 (352)
T ss_dssp TCHHHHHHHHHHHHHSCCCEECTT--SCEECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTTC
T ss_pred cCHHHHHHHHHhccCChhhhhhhc--cccCCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHHHHHhcCC
Confidence 212211111100 0000000000 00123457899999999999999999999999999999876543
No 160
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=5.9e-40 Score=348.83 Aligned_cols=254 Identities=30% Similarity=0.451 Sum_probs=205.9
Q ss_pred HHcCCCCCCcccccCCeeEEEEEeCCCcEEEEEEeccCChhhHHHHHHHHHHHHhccCCcccceeeeeec-CCcEEEEEe
Q 003158 509 ATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDE-EGEQMLVYE 587 (843)
Q Consensus 509 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~-~~~~~lV~e 587 (843)
..++|++.+.||+|+||+||+|.. +|+.||||++.... ..+.+.+|+++++.++||||+++++++.+ .+..++|||
T Consensus 19 ~~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e 95 (278)
T 1byg_A 19 NMKELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTE 95 (278)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEE-TTEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEEC
T ss_pred ChhhceEEeEEecCCCceEEEEEE-cCCEEEEEEecchh--HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEe
Confidence 356889999999999999999987 48899999997543 45678999999999999999999999754 457899999
Q ss_pred cCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCC
Q 003158 588 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 667 (843)
Q Consensus 588 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~ 667 (843)
|+++|+|.+++.......+++..++.++.|+++||+|||+++ |+||||||+||+++.++.+||+|||++......
T Consensus 96 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~-- 170 (278)
T 1byg_A 96 YMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVHRDLAARNVLVSEDNVAKVSDFGLTKEASST-- 170 (278)
T ss_dssp CCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECTTSCEEECCCCC---------
T ss_pred cCCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhCC---ccccCCCcceEEEeCCCcEEEeecccccccccc--
Confidence 999999999997654445788899999999999999999999 999999999999999999999999998754321
Q ss_pred CCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHh-CCCCCCCCcchHHHHHHHhhcccchhhccCCC
Q 003158 668 EGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGNM 746 (843)
Q Consensus 668 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 746 (843)
.....+++.|+|||.+.+..++.++|||||||++|||++ |+.||....... .. ..+..+..
T Consensus 171 --------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~-~~---------~~~~~~~~ 232 (278)
T 1byg_A 171 --------QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD-VV---------PRVEKGYK 232 (278)
T ss_dssp -------------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGG-HH---------HHHTTTCC
T ss_pred --------ccCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHH-HH---------HHHhcCCC
Confidence 123357889999999999999999999999999999998 999997543211 11 11222223
Q ss_pred CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhh
Q 003158 747 GSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNM 788 (843)
Q Consensus 747 ~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~ 788 (843)
...+..+++.+.+++..||+.+|.+||++.++++.|+.+...
T Consensus 233 ~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i~~~ 274 (278)
T 1byg_A 233 MDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKTH 274 (278)
T ss_dssp CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCCcccCCHHHHHHHHHHhcCChhhCCCHHHHHHHHHHHHhh
Confidence 345666778899999999999999999999999999998653
No 161
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=3.1e-40 Score=365.27 Aligned_cols=285 Identities=24% Similarity=0.350 Sum_probs=211.1
Q ss_pred HcCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCC-hhhHHHHHHHHHHHHhccCCcccceeeeeecC-----CcE
Q 003158 510 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE-----GEQ 582 (843)
Q Consensus 510 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~-----~~~ 582 (843)
.++|++.+.||+|+||.||+|... +++.||||++.... ....+.+.+|++++++++||||+++++++... ...
T Consensus 26 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 105 (364)
T 3qyz_A 26 GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDV 105 (364)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCE
T ss_pred cccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceE
Confidence 458999999999999999999965 68899999997533 33347789999999999999999999998654 468
Q ss_pred EEEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccC
Q 003158 583 MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLA 662 (843)
Q Consensus 583 ~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~ 662 (843)
++||||++ |+|.+++... .+++..++.++.|++.||+|||+++ |+||||||+||+++.++.+||+|||+++..
T Consensus 106 ~iv~e~~~-~~L~~~l~~~---~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~ 178 (364)
T 3qyz_A 106 YIVQDLME-TDLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVA 178 (364)
T ss_dssp EEEEECCS-EEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEEcccC-cCHHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCChHhEEECCCCCEEEEeCcceEec
Confidence 99999996 6999999653 4889999999999999999999999 999999999999999999999999999865
Q ss_pred CCCCCCCcccceeeeeecccCCccCchhccc-CCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhh
Q 003158 663 PVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSV 741 (843)
Q Consensus 663 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~ 741 (843)
...... ........||+.|+|||++.+ ..++.++|||||||++|||++|+.||............ . ..
T Consensus 179 ~~~~~~----~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i-~------~~ 247 (364)
T 3qyz_A 179 DPDHDH----TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI-L------GI 247 (364)
T ss_dssp CGGGCB----CCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHH-H------HH
T ss_pred CCCCCc----cccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHH-H------HH
Confidence 422110 111234579999999998765 55899999999999999999999999765432211111 0 00
Q ss_pred ccCCCCCCCHHHHHHHHHHH-HHhcccCCC-CCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCCCCccCCC
Q 003158 742 IDGNMGSYPSECVEKFIKLA-LKCCQDETD-ARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLK 819 (843)
Q Consensus 742 ~~~~~~~~~~~~~~~l~~l~-~~c~~~~p~-~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~sa~e~L~ 819 (843)
.+..+.+....+.... .......|. .+.... ...+..+..+.+|+.+||..||++|||++|+|+
T Consensus 248 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 313 (364)
T 3qyz_A 248 ----LGSPSQEDLNCIINLKARNYLLSLPHKNKVPWN----------RLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 313 (364)
T ss_dssp ----HCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHH----------HHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ----hCCCCHHHHHHhhhhhHHHHHHhcCCccCCCHH----------HhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 1111222111110000 000011111 111111 122334455678999999999999999999999
Q ss_pred CCcccCC
Q 003158 820 HPYVSSD 826 (843)
Q Consensus 820 Hp~f~~~ 826 (843)
||||+..
T Consensus 314 hp~~~~~ 320 (364)
T 3qyz_A 314 HPYLEQY 320 (364)
T ss_dssp SGGGTTT
T ss_pred Ccchhhc
Confidence 9999875
No 162
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=8.8e-40 Score=351.78 Aligned_cols=269 Identities=25% Similarity=0.402 Sum_probs=211.9
Q ss_pred HcCCCCCCcccccCCeeEEEEEe-----CCCcEEEEEEeccCC-hhhHHHHHHHHHHHHhccCCcccceeeeeecC--Cc
Q 003158 510 TNNFNSSTQIGQGGYGKVYKGIL-----PDGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE--GE 581 (843)
Q Consensus 510 ~~~~~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~--~~ 581 (843)
..+|++.+.||+|+||.||+|.+ .+++.||||++.... ....+.+.+|+++++.++||||+++++++.+. ..
T Consensus 20 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 99 (302)
T 4e5w_A 20 KRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNG 99 (302)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CC
T ss_pred hhhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCce
Confidence 35688899999999999999984 368999999997543 23357889999999999999999999999776 67
Q ss_pred EEEEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeecccccc
Q 003158 582 QMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRL 661 (843)
Q Consensus 582 ~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~ 661 (843)
.++||||+++|+|.+++.... ..+++..++.++.|++.||+|||+++ |+||||||+||+++.++.+||+|||++..
T Consensus 100 ~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~~~~ 175 (302)
T 4e5w_A 100 IKLIMEFLPSGSLKEYLPKNK-NKINLKQQLKYAVQICKGMDYLGSRQ---YVHRDLAARNVLVESEHQVKIGDFGLTKA 175 (302)
T ss_dssp EEEEEECCTTCBHHHHHHHHT-TTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEETTEEEECCCTTCEE
T ss_pred EEEEEEeCCCCcHHHHHHhcc-ccCCHHHHHHHHHHHHHHHHHhhcCC---cccCCCchheEEEcCCCCEEECccccccc
Confidence 899999999999999996543 35889999999999999999999999 99999999999999999999999999987
Q ss_pred CCCCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHh-----hcc
Q 003158 662 APVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAY-----QSS 736 (843)
Q Consensus 662 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~-----~~~ 736 (843)
...... .........||..|+|||.+.+..++.++|||||||++|||++|+.|+.............. ...
T Consensus 176 ~~~~~~----~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 251 (302)
T 4e5w_A 176 IETDKE----YYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTR 251 (302)
T ss_dssp CCTTCC----EEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHH
T ss_pred ccCCCc----ceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHH
Confidence 653321 01222345678889999999999999999999999999999999998643211100000000 000
Q ss_pred cchhhccCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhh
Q 003158 737 MMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIW 786 (843)
Q Consensus 737 ~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~ 786 (843)
....+..+.....+..+++.+.+++.+||+.+|.+||++.++++.|+++.
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll 301 (302)
T 4e5w_A 252 LVNTLKEGKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALL 301 (302)
T ss_dssp HHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHHhccCCCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHh
Confidence 01122223334456677889999999999999999999999999999864
No 163
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=8.9e-40 Score=361.37 Aligned_cols=262 Identities=24% Similarity=0.407 Sum_probs=207.7
Q ss_pred HHHHHHHcCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCCh--------hhHHHHHHHHHHHHhc-cCCccccee
Q 003158 504 GEMALATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL--------QGEKEFLTEIQFLSRL-HHRNLVSLV 573 (843)
Q Consensus 504 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l-~h~nIv~l~ 573 (843)
.......++|++.+.||+|+||.||+|... +|+.||||++..... ...+.+.+|+.+++.+ +||||++++
T Consensus 87 ~~~~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~ 166 (365)
T 2y7j_A 87 AAAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLI 166 (365)
T ss_dssp HHHHHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEE
T ss_pred hhhhhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEE
Confidence 344555678999999999999999999975 799999999875431 1135678999999999 799999999
Q ss_pred eeeecCCcEEEEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEE
Q 003158 574 GYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKV 653 (843)
Q Consensus 574 ~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl 653 (843)
+++...+..++||||+++++|.+++... ..+++..+..++.||+.||.|||+.+ |+||||||+||+++.++.+||
T Consensus 167 ~~~~~~~~~~lv~e~~~g~~L~~~l~~~--~~l~~~~~~~i~~qi~~~L~~LH~~g---i~H~Dlkp~NIl~~~~~~ikl 241 (365)
T 2y7j_A 167 DSYESSSFMFLVFDLMRKGELFDYLTEK--VALSEKETRSIMRSLLEAVSFLHANN---IVHRDLKPENILLDDNMQIRL 241 (365)
T ss_dssp EEEEBSSEEEEEECCCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEE
T ss_pred EEEeeCCEEEEEEEeCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCCEEE
Confidence 9999999999999999999999999764 35889999999999999999999999 999999999999999999999
Q ss_pred eeccccccCCCCCCCCcccceeeeeecccCCccCchhccc------CCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHH
Q 003158 654 ADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT------HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVR 727 (843)
Q Consensus 654 ~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~ 727 (843)
+|||++....... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||.......
T Consensus 242 ~DfG~~~~~~~~~--------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~- 312 (365)
T 2y7j_A 242 SDFGFSCHLEPGE--------KLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQIL- 312 (365)
T ss_dssp CCCTTCEECCTTC--------CBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH-
T ss_pred EecCcccccCCCc--------ccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHHH-
Confidence 9999998664321 1234569999999999864 357889999999999999999999997543211
Q ss_pred HHHHHhhcccchhhccCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCC
Q 003158 728 EVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSK 807 (843)
Q Consensus 728 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~d 807 (843)
.... +..+.. ++.... +......+.+++.+||..|
T Consensus 313 ~~~~---------i~~~~~-------------------------~~~~~~-----------~~~~~~~~~~li~~~L~~d 347 (365)
T 2y7j_A 313 MLRM---------IMEGQY-------------------------QFSSPE-----------WDDRSSTVKDLISRLLQVD 347 (365)
T ss_dssp HHHH---------HHHTCC-------------------------CCCHHH-----------HSSSCHHHHHHHHHHSCSS
T ss_pred HHHH---------HHhCCC-------------------------CCCCcc-----------cccCCHHHHHHHHHHcCCC
Confidence 1100 000000 000000 0111223346888899999
Q ss_pred CCCCCCCccCCCCCccc
Q 003158 808 EETPPSSSSMLKHPYVS 824 (843)
Q Consensus 808 p~~R~sa~e~L~Hp~f~ 824 (843)
|++|||++|+|+||||+
T Consensus 348 P~~Rps~~ell~hp~f~ 364 (365)
T 2y7j_A 348 PEARLTAEQALQHPFFE 364 (365)
T ss_dssp TTTSCCHHHHHHSGGGC
T ss_pred hhHCcCHHHHhcCcccC
Confidence 99999999999999996
No 164
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00 E-value=5.1e-40 Score=359.40 Aligned_cols=288 Identities=21% Similarity=0.318 Sum_probs=210.4
Q ss_pred HcCCCCCCcccccCCeeEEEEEe--CCCcEEEEEEeccCChhhHHHHHHHHHHHHhccCCc------ccceeeeeecCCc
Q 003158 510 TNNFNSSTQIGQGGYGKVYKGIL--PDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRN------LVSLVGYCDEEGE 581 (843)
Q Consensus 510 ~~~~~~~~~lg~G~~g~Vy~~~~--~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n------Iv~l~~~~~~~~~ 581 (843)
.++|++.+.||+|+||+||+|.. .+++.||||++... ....+.+.+|+++++.++|++ ++++++++.+.+.
T Consensus 13 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~ 91 (339)
T 1z57_A 13 SARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV-DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGH 91 (339)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTE
T ss_pred cCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecC-CchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCc
Confidence 46899999999999999999986 36899999999753 344567889999999987665 9999999999999
Q ss_pred EEEEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcC--------------
Q 003158 582 QMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDH-------------- 647 (843)
Q Consensus 582 ~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~-------------- 647 (843)
.++||||+ +++|.+++......++++..++.++.|+++||+|||+++ |+||||||+||+++.
T Consensus 92 ~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~ 167 (339)
T 1z57_A 92 ICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNK---LTHTDLKPENILFVQSDYTEAYNPKIKRD 167 (339)
T ss_dssp EEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESCCCEEEEEC----CE
T ss_pred EEEEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHCC---CcCCCCCHHHEEEeccccccccCCccccc
Confidence 99999999 899999998876667899999999999999999999999 999999999999987
Q ss_pred -----CCcEEEeeccccccCCCCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCC
Q 003158 648 -----KFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 722 (843)
Q Consensus 648 -----~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~ 722 (843)
++.+||+|||+++..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 168 ~~~~~~~~~kl~Dfg~~~~~~~~----------~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~ 237 (339)
T 1z57_A 168 ERTLINPDIKVVDFGSATYDDEH----------HSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTH 237 (339)
T ss_dssp EEEESCCCEEECCCSSCEETTSC----------CCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred cccccCCCceEeeCcccccCccc----------cccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCC
Confidence 668999999999864321 23346899999999999999999999999999999999999999765
Q ss_pred cchHHHHHHHhhcccchhhccCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhh----hhCC---CCCCC
Q 003158 723 KNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIW----NMMP---ESDTK 795 (843)
Q Consensus 723 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~----~~~~---~~~~~ 795 (843)
..... .... ... .+..|......... ...+..+...-+............. .... ...+.
T Consensus 238 ~~~~~-~~~~------~~~----~~~~p~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (339)
T 1z57_A 238 DSKEH-LAMM------ERI----LGPLPKHMIQKTRK--RKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHER 304 (339)
T ss_dssp CHHHH-HHHH------HHH----HCSCCHHHHHHCSC--GGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHH
T ss_pred ChHHH-HHHH------HHH----hCCCCHHHHhhccc--hhHHhhccccccccccccchhhhcCcchhhhcccchhhHHH
Confidence 43221 1110 000 11122222111000 0000000000000000111111100 0000 00122
Q ss_pred CCccccCCCCCCCCCCCCCccCCCCCcccC
Q 003158 796 TPEFINSEHTSKEETPPSSSSMLKHPYVSS 825 (843)
Q Consensus 796 ~~dll~~~L~~dp~~R~sa~e~L~Hp~f~~ 825 (843)
+.+|+.+||..||++|||++|+++||||..
T Consensus 305 l~~li~~~L~~dP~~Rpt~~ell~hp~f~~ 334 (339)
T 1z57_A 305 LFDLIQKMLEYDPAKRITLREALKHPFFDL 334 (339)
T ss_dssp HHHHHHHHTCSSTTTSCCHHHHTTSGGGGG
T ss_pred HHHHHHHHhCcCcccccCHHHHhcCHHHHH
Confidence 347999999999999999999999999976
No 165
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=7.7e-40 Score=350.39 Aligned_cols=261 Identities=27% Similarity=0.391 Sum_probs=211.7
Q ss_pred HHHcCCCCCC-cccccCCeeEEEEEe---CCCcEEEEEEeccCCh--hhHHHHHHHHHHHHhccCCcccceeeeeecCCc
Q 003158 508 LATNNFNSST-QIGQGGYGKVYKGIL---PDGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGE 581 (843)
Q Consensus 508 ~~~~~~~~~~-~lg~G~~g~Vy~~~~---~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~ 581 (843)
...++|.+.+ .||+|+||+||+|.+ .+++.||||++..... ...+++.+|+++++.++||||+++++++ ..+.
T Consensus 13 ~~~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~ 91 (291)
T 1xbb_A 13 LDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAES 91 (291)
T ss_dssp CCGGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSS
T ss_pred ecchhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCC
Confidence 3456788877 999999999999964 2478999999975432 2256799999999999999999999999 5678
Q ss_pred EEEEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeecccccc
Q 003158 582 QMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRL 661 (843)
Q Consensus 582 ~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~ 661 (843)
.++||||+++++|.+++.... .+++..++.++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||++..
T Consensus 92 ~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~~~~ 166 (291)
T 1xbb_A 92 WMLVMEMAELGPLNKYLQQNR--HVKDKNIIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKA 166 (291)
T ss_dssp EEEEEECCTTEEHHHHHHHCT--TCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEETTEEEECCCTTCEE
T ss_pred cEEEEEeCCCCCHHHHHHhCc--CCCHHHHHHHHHHHHHHHHHHHhCC---eEcCCCCcceEEEeCCCcEEEccCCccee
Confidence 899999999999999997643 4889999999999999999999999 99999999999999999999999999987
Q ss_pred CCCCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHh-CCCCCCCCcchHHHHHHHhhcccchh
Q 003158 662 APVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFS 740 (843)
Q Consensus 662 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~ 740 (843)
....... ........+++.|+|||.+.+..++.++|||||||++|||++ |+.||....... ... .
T Consensus 167 ~~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~--~~~--------~ 232 (291)
T 1xbb_A 167 LRADENY----YKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE--VTA--------M 232 (291)
T ss_dssp CCTTCSE----EEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH--HHH--------H
T ss_pred eccCCCc----ccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHHH--HHH--------H
Confidence 6433210 111223446788999999999889999999999999999999 999997654321 111 1
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhh
Q 003158 741 VIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNM 788 (843)
Q Consensus 741 ~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~ 788 (843)
+..+.....+..+++.+.+++..||+.+|.+||++.++++.|+.+...
T Consensus 233 ~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~ 280 (291)
T 1xbb_A 233 LEKGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYD 280 (291)
T ss_dssp HHTTCCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHH
T ss_pred HHcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHH
Confidence 122233445667788999999999999999999999999999998764
No 166
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=1.1e-39 Score=352.73 Aligned_cols=261 Identities=23% Similarity=0.337 Sum_probs=199.0
Q ss_pred HcCCCCCCcccccCCeeEEEEEe-CCCcEEEEEEeccCCh---hhHHHHHHHHHHHHhccCCcccceeeeeecCCc----
Q 003158 510 TNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGE---- 581 (843)
Q Consensus 510 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~---- 581 (843)
.++|++.+.||+|+||.||+|.. .+++.||||++..... ...+.+.+|+++++.++||||+++++++.....
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~ 90 (311)
T 3ork_A 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL 90 (311)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEE
T ss_pred cCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcc
Confidence 46899999999999999999996 5789999999976432 234578899999999999999999999876543
Q ss_pred EEEEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeecccccc
Q 003158 582 QMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRL 661 (843)
Q Consensus 582 ~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~ 661 (843)
.++||||+++|+|.+++.... ++++..++.++.|+++||+|||+++ |+||||||+||+++.++.+||+|||+++.
T Consensus 91 ~~lv~e~~~g~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~ 165 (311)
T 3ork_A 91 PYIVMEYVDGVTLRDIVHTEG--PMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARA 165 (311)
T ss_dssp EEEEEECCCEEEHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEEETTSCEEECCCSCC--
T ss_pred cEEEEecCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC---CCcCCCCHHHEEEcCCCCEEEeeccCccc
Confidence 499999999999999997653 5889999999999999999999999 99999999999999999999999999986
Q ss_pred CCCCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhh
Q 003158 662 APVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSV 741 (843)
Q Consensus 662 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~ 741 (843)
....... ........||+.|+|||++.+..++.++|||||||++|||++|+.||............ ........
T Consensus 166 ~~~~~~~----~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~-~~~~~~~~- 239 (311)
T 3ork_A 166 IADSGNS----VTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQH-VREDPIPP- 239 (311)
T ss_dssp --------------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHH-HHCCCCCH-
T ss_pred ccccccc----cccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHH-hcCCCCCc-
Confidence 5432110 11223456899999999999999999999999999999999999999765432221111 11100000
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHH-HHHHHhh
Q 003158 742 IDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVM-RELESIW 786 (843)
Q Consensus 742 ~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl-~~L~~~~ 786 (843)
......++.++.+++.+||+.+|.+||+..+++ +.+....
T Consensus 240 -----~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~ 280 (311)
T 3ork_A 240 -----SARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVH 280 (311)
T ss_dssp -----HHHSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHH
T ss_pred -----ccccCCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHHh
Confidence 001223567889999999999999999766554 4554443
No 167
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=2.4e-39 Score=346.21 Aligned_cols=262 Identities=27% Similarity=0.485 Sum_probs=201.9
Q ss_pred HHHcCCCCCCcccccCCeeEEEEEeCCCcEEEEEEeccCC--hhhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEE
Q 003158 508 LATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLV 585 (843)
Q Consensus 508 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV 585 (843)
+..++|++.+.||+|+||+||+|...+ .||||+++... ....+.+.+|+++++.++||||+++++++ .....++|
T Consensus 21 i~~~~y~~~~~lG~G~~g~Vy~~~~~~--~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv 97 (289)
T 3og7_A 21 IPDGQITVGQRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIV 97 (289)
T ss_dssp CCTTSCEEEEEEEECSSEEEEEEESSS--EEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEE
T ss_pred cCccceeeeeEecCCCCeEEEEEEEcC--ceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEEE
Confidence 345789999999999999999998643 59999987543 33456789999999999999999999966 45678999
Q ss_pred EecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCC
Q 003158 586 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVP 665 (843)
Q Consensus 586 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~ 665 (843)
|||+++++|.+++... ...+++..++.++.|++.||+|||+++ |+||||||+||+++.++.+||+|||+++.....
T Consensus 98 ~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~L~~lH~~~---i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 173 (289)
T 3og7_A 98 TQWCEGSSLYHHLHAS-ETKFEMKKLIDIARQTARGMDYLHAKS---IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRW 173 (289)
T ss_dssp EECCCEEEHHHHHTTC----CCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEETTTEEEECCCC--------
T ss_pred EEecCCCcHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHHhCC---cccccCccceEEECCCCCEEEccceeccccccc
Confidence 9999999999999654 345889999999999999999999999 999999999999999999999999999765422
Q ss_pred CCCCcccceeeeeecccCCccCchhcc---cCCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhc
Q 003158 666 DIEGIVPAHVSTVVKGTPGYLDPEYFL---THKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVI 742 (843)
Q Consensus 666 ~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 742 (843)
. .........||+.|+|||.+. +..++.++|||||||++|||++|+.||............. ... ..
T Consensus 174 ~-----~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~-~~~----~~ 243 (289)
T 3og7_A 174 S-----GSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMV-GRG----SL 243 (289)
T ss_dssp ---------------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHHHHHHH-HHT----SC
T ss_pred c-----ccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHHHHHHh-ccc----cc
Confidence 1 112223456899999999997 5678889999999999999999999998655433322221 111 11
Q ss_pred cCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhh
Q 003158 743 DGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIW 786 (843)
Q Consensus 743 ~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~ 786 (843)
..........+++.+.+++..||+.+|.+||++.++++.|+++.
T Consensus 244 ~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~ 287 (289)
T 3og7_A 244 SPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELA 287 (289)
T ss_dssp CCCTTSSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTT
T ss_pred CcchhhccccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHh
Confidence 12222334567788999999999999999999999999999864
No 168
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=6e-40 Score=350.74 Aligned_cols=252 Identities=23% Similarity=0.390 Sum_probs=208.2
Q ss_pred HcCCCCCCcccccCCeeEEEEEeC-CC-------cEEEEEEeccCChhhHHHHHHHHHHHHhccCCcccceeeeeecCCc
Q 003158 510 TNNFNSSTQIGQGGYGKVYKGILP-DG-------TVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGE 581 (843)
Q Consensus 510 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~-------~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~ 581 (843)
.++|.+.+.||+|+||+||+|... ++ ..||+|++........+.+.+|+++++.++||||+++++++.+++.
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 86 (289)
T 4fvq_A 7 NEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDE 86 (289)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTC
T ss_pred hhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCC
Confidence 457888999999999999999864 33 5799999987666667889999999999999999999999999999
Q ss_pred EEEEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCc--------EEE
Q 003158 582 QMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFT--------AKV 653 (843)
Q Consensus 582 ~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~--------~kl 653 (843)
.++||||+++|+|.+++.... ..+++..++.++.|+++||+|||+++ |+||||||+|||++.++. +||
T Consensus 87 ~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~~~~~kl 162 (289)
T 4fvq_A 87 NILVQEFVKFGSLDTYLKKNK-NCINILWKLEVAKQLAAAMHFLEENT---LIHGNVCAKNILLIREEDRKTGNPPFIKL 162 (289)
T ss_dssp CEEEEECCTTCBHHHHHHHTG-GGCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEEEECCBGGGTBCCEEEE
T ss_pred CEEEEECCCCCCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHhhCC---eECCCcCcceEEEecCCcccccccceeee
Confidence 999999999999999997643 34888999999999999999999999 999999999999998887 999
Q ss_pred eeccccccCCCCCCCCcccceeeeeecccCCccCchhccc-CCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHH
Q 003158 654 ADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIA 732 (843)
Q Consensus 654 ~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~ 732 (843)
+|||++..... .....||+.|+|||++.+ ..++.++|||||||++|||++|..|+.............
T Consensus 163 ~Dfg~~~~~~~-----------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~~~~ 231 (289)
T 4fvq_A 163 SDPGISITVLP-----------KDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQFY 231 (289)
T ss_dssp CCCCSCTTTSC-----------HHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHH
T ss_pred ccCcccccccC-----------ccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchHHHHHHh
Confidence 99999875431 123458899999999987 778999999999999999999666555443332222211
Q ss_pred hhcccchhhccCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhh
Q 003158 733 YQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWN 787 (843)
Q Consensus 733 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~ 787 (843)
.. ....+...+.++.+++..||+.+|.+||++.++++.|+++..
T Consensus 232 ~~-----------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~ 275 (289)
T 4fvq_A 232 ED-----------RHQLPAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFT 275 (289)
T ss_dssp HT-----------TCCCCCCSSCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC-
T ss_pred hc-----------cCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcC
Confidence 10 112233335678899999999999999999999999998754
No 169
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00 E-value=1.1e-39 Score=363.31 Aligned_cols=201 Identities=24% Similarity=0.306 Sum_probs=173.4
Q ss_pred HHcCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCChhhHHHHHHHHHHHHhcc-CC-----cccceeeeeecCCc
Q 003158 509 ATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLH-HR-----NLVSLVGYCDEEGE 581 (843)
Q Consensus 509 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~-----nIv~l~~~~~~~~~ 581 (843)
..++|++.+.||+|+||+||+|... +++.||||++... .....++..|+++++.++ |+ +|+++++++...+.
T Consensus 52 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~ 130 (382)
T 2vx3_A 52 WMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK-KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNH 130 (382)
T ss_dssp ETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETTE
T ss_pred eeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEecc-HHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCCc
Confidence 4578999999999999999999965 6889999999753 333567788999988885 55 49999999999999
Q ss_pred EEEEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhc--CCCCCEEeccCCCCcEEEc--CCCcEEEeecc
Q 003158 582 QMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHT--EADPPVFHRDIKASNILLD--HKFTAKVADFG 657 (843)
Q Consensus 582 ~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~--~~~~~iiH~Dlkp~NILl~--~~~~~kl~DfG 657 (843)
.++||||++ |+|.+++.......+++..++.++.|++.||.|||+ .+ |+||||||+|||++ .++.+||+|||
T Consensus 131 ~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~~~---ivHrDlkp~NIll~~~~~~~~kL~DFG 206 (382)
T 2vx3_A 131 LCLVFEMLS-YNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELS---IIHCDLKPENILLCNPKRSAIKIVDFG 206 (382)
T ss_dssp EEEEEECCC-CBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTSTTTC---EECCCCSGGGEEESSTTSCCEEECCCT
T ss_pred eEEEEecCC-CCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccCCCC---EEcCCCCcccEEEecCCCCcEEEEecc
Confidence 999999995 699999987765678999999999999999999995 45 99999999999994 57889999999
Q ss_pred ccccCCCCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCcc
Q 003158 658 LSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKN 724 (843)
Q Consensus 658 la~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~ 724 (843)
+|+..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||.....
T Consensus 207 ~a~~~~~~----------~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~ 263 (382)
T 2vx3_A 207 SSCQLGQR----------IYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANE 263 (382)
T ss_dssp TCEETTCC----------CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred Cceecccc----------cccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH
Confidence 99875421 2335689999999999999999999999999999999999999986543
No 170
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=1.8e-39 Score=347.32 Aligned_cols=254 Identities=26% Similarity=0.430 Sum_probs=198.8
Q ss_pred CCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCC--hhhHHHHHHHHHHHHhccCCcccceeeeeec----CCcEEE
Q 003158 512 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDE----EGEQML 584 (843)
Q Consensus 512 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~----~~~~~l 584 (843)
.|.+.+.||+|+||+||+|... ++..||+|++.... ....+.+.+|+++++.++||||+++++++.. ....++
T Consensus 27 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l 106 (290)
T 1t4h_A 27 FLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVL 106 (290)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEE
T ss_pred eEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEE
Confidence 4677788999999999999964 68899999987532 3345678999999999999999999998864 356899
Q ss_pred EEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEc-CCCcEEEeeccccccCC
Q 003158 585 VYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLD-HKFTAKVADFGLSRLAP 663 (843)
Q Consensus 585 V~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~-~~~~~kl~DfGla~~~~ 663 (843)
||||+++|+|.+++... ..+++..++.++.|++.||.|||+.+ ++|+||||||+||+++ +++.+||+|||++....
T Consensus 107 v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~-~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~~ 183 (290)
T 1t4h_A 107 VTELMTSGTLKTYLKRF--KVMKIKVLRSWCRQILKGLQFLHTRT-PPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKR 183 (290)
T ss_dssp EEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHTSS-SCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCC
T ss_pred EEEecCCCCHHHHHHHc--cCCCHHHHHHHHHHHHHHHHHHHcCC-CCEEECCCCHHHEEEECCCCCEEEeeCCCccccc
Confidence 99999999999999764 34888999999999999999999875 4599999999999998 78999999999997543
Q ss_pred CCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhcc
Q 003158 664 VPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVID 743 (843)
Q Consensus 664 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 743 (843)
.. ......||+.|+|||++. ..++.++|||||||++|||++|+.||...............
T Consensus 184 ~~---------~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~--------- 244 (290)
T 1t4h_A 184 AS---------FAKAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTS--------- 244 (290)
T ss_dssp TT---------SBEESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTT---------
T ss_pred cc---------ccccccCCcCcCCHHHHh-ccCCCcchHHHHHHHHHHHHhCCCCCCCcCcHHHHHHHHhc---------
Confidence 21 223456899999999886 45899999999999999999999999765443322211100
Q ss_pred CCCC-CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCCCCccCCCCCc
Q 003158 744 GNMG-SYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPY 822 (843)
Q Consensus 744 ~~~~-~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~sa~e~L~Hp~ 822 (843)
+... ..+. ...+.+.+++.+||..||++|||++|+|+|||
T Consensus 245 ~~~~~~~~~---------------------------------------~~~~~l~~li~~~l~~dp~~Rps~~ell~h~~ 285 (290)
T 1t4h_A 245 GVKPASFDK---------------------------------------VAIPEVKEIIEGCIRQNKDERYSIKDLLNHAF 285 (290)
T ss_dssp TCCCGGGGG---------------------------------------CCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGG
T ss_pred cCCccccCC---------------------------------------CCCHHHHHHHHHHccCChhhCCCHHHHhhCcc
Confidence 0000 0000 01112336777788899999999999999999
Q ss_pred ccCC
Q 003158 823 VSSD 826 (843)
Q Consensus 823 f~~~ 826 (843)
|+++
T Consensus 286 f~~~ 289 (290)
T 1t4h_A 286 FQEE 289 (290)
T ss_dssp GC--
T ss_pred cccC
Confidence 9875
No 171
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=1.2e-39 Score=355.49 Aligned_cols=207 Identities=25% Similarity=0.407 Sum_probs=169.7
Q ss_pred HcCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCCh-hhHHHHHHHHHHHHhccCCcccceeeeeecCC-------
Q 003158 510 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEG------- 580 (843)
Q Consensus 510 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~------- 580 (843)
.++|++.+.||+|+||.||+|+.. +|+.||||++..... ...+.+.+|++++++++||||+++++++.+..
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 84 (332)
T 3qd2_B 5 LTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEE 84 (332)
T ss_dssp HHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHH
T ss_pred hhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhh
Confidence 467899999999999999999976 799999999975433 34578999999999999999999999985543
Q ss_pred --------------------------------------------------cEEEEEecCCCCCHHHHHhhcCC-CCcchh
Q 003158 581 --------------------------------------------------EQMLVYEFMSNGTLRDQLSAKSK-EPLGFA 609 (843)
Q Consensus 581 --------------------------------------------------~~~lV~e~~~~gsL~~~l~~~~~-~~l~~~ 609 (843)
..++||||+++|+|.+++..... ....+.
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~ 164 (332)
T 3qd2_B 85 MDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHG 164 (332)
T ss_dssp HHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCHH
T ss_pred hhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhhH
Confidence 37999999999999999976543 234555
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCCCCcc-----cceeeeeecccCC
Q 003158 610 MRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIV-----PAHVSTVVKGTPG 684 (843)
Q Consensus 610 ~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~-----~~~~~~~~~gt~~ 684 (843)
.++.++.||++||+|||+++ |+||||||+||+++.++.+||+|||+++........... .........||+.
T Consensus 165 ~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~ 241 (332)
T 3qd2_B 165 VCLHIFIQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKL 241 (332)
T ss_dssp HHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGG
T ss_pred HHHHHHHHHHHHHHHHHhCC---eeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcC
Confidence 68899999999999999999 999999999999999999999999999876543211000 0112234569999
Q ss_pred ccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCC
Q 003158 685 YLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPI 719 (843)
Q Consensus 685 y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf 719 (843)
|+|||++.+..++.++|||||||++|||++|..|+
T Consensus 242 y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~ 276 (332)
T 3qd2_B 242 YMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQ 276 (332)
T ss_dssp GSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCH
T ss_pred ccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCCh
Confidence 99999999999999999999999999999986654
No 172
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=2.6e-41 Score=375.68 Aligned_cols=197 Identities=17% Similarity=0.192 Sum_probs=163.9
Q ss_pred HcCCCCCCcccccCCeeEEEEEe-CCCcEEEEEEeccC---ChhhHHHHHHHH---HHHHhccCCccccee-------ee
Q 003158 510 TNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEG---SLQGEKEFLTEI---QFLSRLHHRNLVSLV-------GY 575 (843)
Q Consensus 510 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~---~~l~~l~h~nIv~l~-------~~ 575 (843)
.++|.+.+.||+|+||+||+|.. .+|+.||||++... .....+.+.+|+ ++++.++||||++++ ++
T Consensus 72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~ 151 (377)
T 3byv_A 72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 151 (377)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence 46788899999999999999996 56999999998743 333457889999 455566899999998 55
Q ss_pred eecCC-----------------cEEEEEecCCCCCHHHHHhhcC-----CCCcchhHHHHHHHHHHHHHHHHhcCCCCCE
Q 003158 576 CDEEG-----------------EQMLVYEFMSNGTLRDQLSAKS-----KEPLGFAMRLSIALGSSRGILYLHTEADPPV 633 (843)
Q Consensus 576 ~~~~~-----------------~~~lV~e~~~~gsL~~~l~~~~-----~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~i 633 (843)
+.+.+ ..++||||+ +|+|.+++.... ...+++..++.|+.||++||+|||+++ |
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---i 227 (377)
T 3byv_A 152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYG---L 227 (377)
T ss_dssp EECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHTT---E
T ss_pred hhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhCC---e
Confidence 54443 379999999 689999997632 123556888899999999999999999 9
Q ss_pred EeccCCCCcEEEcCCCcEEEeeccccccCCCCCCCCcccceeeeeecccCCccCchhcccC-----------CCCchhhh
Q 003158 634 FHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTH-----------KLTDKSDV 702 (843)
Q Consensus 634 iH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----------~~~~~sDv 702 (843)
+||||||+|||++.++.+||+|||+|+... .......| +.|+|||++.+. .++.++||
T Consensus 228 vHrDikp~NIll~~~~~~kL~DFG~a~~~~----------~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Dv 296 (377)
T 3byv_A 228 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDG----------ARVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDA 296 (377)
T ss_dssp ECSCCCGGGEEECTTCCEEECCGGGCEETT----------CEEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHH
T ss_pred ecCCCCHHHEEEcCCCCEEEEechhheecC----------CcccCCCC-cCccChhhhcccccccccccccccCChhhhH
Confidence 999999999999999999999999998532 12344567 999999999987 89999999
Q ss_pred HHHHHHHHHHHhCCCCCCC
Q 003158 703 YSLGVVFLELLTGMQPISH 721 (843)
Q Consensus 703 wS~G~~l~elltg~~pf~~ 721 (843)
|||||++|||++|+.||..
T Consensus 297 wSlG~il~elltg~~Pf~~ 315 (377)
T 3byv_A 297 WALGLVIYWIWCADLPITK 315 (377)
T ss_dssp HHHHHHHHHHHHSSCCC--
T ss_pred HHHHHHHHHHHHCCCCCcc
Confidence 9999999999999999964
No 173
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=9.6e-40 Score=348.00 Aligned_cols=257 Identities=22% Similarity=0.355 Sum_probs=205.0
Q ss_pred HcCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCChh------hHHHHHHHHHHHHhccCCcccceeeeeecCCcE
Q 003158 510 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ------GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQ 582 (843)
Q Consensus 510 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~ 582 (843)
.++|++.+.||+|+||+||+|... +++.||+|++...... ..+.+.+|+++++.++||||+++++++.+.+..
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~ 83 (283)
T 3bhy_A 4 EDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDV 83 (283)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred hhhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeE
Confidence 467899999999999999999976 6899999998754321 357899999999999999999999999999999
Q ss_pred EEEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCC----cEEEeeccc
Q 003158 583 MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKF----TAKVADFGL 658 (843)
Q Consensus 583 ~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~----~~kl~DfGl 658 (843)
++||||+++++|.+++.... .+++..++.++.|+++||.|||+++ |+||||||+||+++.++ .+||+|||+
T Consensus 84 ~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~ 158 (283)
T 3bhy_A 84 VLILELVSGGELFDFLAEKE--SLTEDEATQFLKQILDGVHYLHSKR---IAHFDLKPENIMLLDKNVPNPRIKLIDFGI 158 (283)
T ss_dssp EEEEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESCSSSSSCCEEECCCTT
T ss_pred EEEEeecCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCChHHEEEecCCCCCCceEEEeccc
Confidence 99999999999999997643 5889999999999999999999999 99999999999998877 899999999
Q ss_pred cccCCCCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccc
Q 003158 659 SRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMM 738 (843)
Q Consensus 659 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~ 738 (843)
+....... ......|++.|+|||++.+..++.++||||||+++|||++|+.||........ ...
T Consensus 159 ~~~~~~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-~~~------- 222 (283)
T 3bhy_A 159 AHKIEAGN--------EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQET-LTN------- 222 (283)
T ss_dssp CEECC----------------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHH-HHH-------
T ss_pred ceeccCCC--------cccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchHHH-HHH-------
Confidence 98654221 12344689999999999999999999999999999999999999975432111 100
Q ss_pred hhhccCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCCCCccCC
Q 003158 739 FSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSML 818 (843)
Q Consensus 739 ~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~sa~e~L 818 (843)
+.. .....+... .+.......+++.+||..||++|||++|++
T Consensus 223 --~~~-~~~~~~~~~-----------------------------------~~~~~~~~~~li~~~l~~dp~~Rps~~~~l 264 (283)
T 3bhy_A 223 --ISA-VNYDFDEEY-----------------------------------FSNTSELAKDFIRRLLVKDPKRRMTIAQSL 264 (283)
T ss_dssp --HHT-TCCCCCHHH-----------------------------------HTTCCHHHHHHHHTTSCSSGGGSCCHHHHH
T ss_pred --hHh-cccCCcchh-----------------------------------cccCCHHHHHHHHHHccCCHhHCcCHHHHH
Confidence 000 000011100 011122334788899999999999999999
Q ss_pred CCCcccC
Q 003158 819 KHPYVSS 825 (843)
Q Consensus 819 ~Hp~f~~ 825 (843)
+||||+.
T Consensus 265 ~h~~~~~ 271 (283)
T 3bhy_A 265 EHSWIKA 271 (283)
T ss_dssp HCHHHHH
T ss_pred hCHHHHH
Confidence 9999965
No 174
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=5.4e-39 Score=344.84 Aligned_cols=264 Identities=26% Similarity=0.376 Sum_probs=212.3
Q ss_pred CCCCCCcccccCCeeEEEEEeC-C---CcEEEEEEeccCCh-hhHHHHHHHHHHHHhccCCcccceeeeeecCCcE-EEE
Q 003158 512 NFNSSTQIGQGGYGKVYKGILP-D---GTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQ-MLV 585 (843)
Q Consensus 512 ~~~~~~~lg~G~~g~Vy~~~~~-~---~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~-~lV 585 (843)
.|...+.||+|+||+||+|.+. + +..||+|++..... ...+.+.+|+++++.++||||+++++++.+.+.. ++|
T Consensus 22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v 101 (298)
T 3pls_A 22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVL 101 (298)
T ss_dssp EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEE
T ss_pred EEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEE
Confidence 4556689999999999999853 2 33799999875433 3457889999999999999999999999766655 999
Q ss_pred EecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCC
Q 003158 586 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVP 665 (843)
Q Consensus 586 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~ 665 (843)
|||+.+|+|.+++... ...+++..++.++.|+++||+|||+++ |+||||||+||+++.++.+||+|||+++.....
T Consensus 102 ~e~~~~~~L~~~~~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~ 177 (298)
T 3pls_A 102 LPYMCHGDLLQFIRSP-QRNPTVKDLISFGLQVARGMEYLAEQK---FVHRDLAARNCMLDESFTVKVADFGLARDILDR 177 (298)
T ss_dssp ECCCTTCBHHHHHHCT-TCCCBHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECTTCCEEECCTTSSCTTTTG
T ss_pred EecccCCCHHHHHhcc-ccCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCcceEEEcCCCcEEeCcCCCcccccCC
Confidence 9999999999999663 346889999999999999999999999 999999999999999999999999999865432
Q ss_pred CCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhccCC
Q 003158 666 DIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGN 745 (843)
Q Consensus 666 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 745 (843)
... .........+++.|+|||.+.+..++.++|||||||++|||++|..|+....+...... .+....
T Consensus 178 ~~~---~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~~~~~---------~~~~~~ 245 (298)
T 3pls_A 178 EYY---SVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTH---------FLAQGR 245 (298)
T ss_dssp GGG---CSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGGGHHH---------HHHTTC
T ss_pred ccc---ccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCHHHHHH---------HhhcCC
Confidence 110 11222345678899999999999999999999999999999996666654433222111 112222
Q ss_pred CCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCC
Q 003158 746 MGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPE 791 (843)
Q Consensus 746 ~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~ 791 (843)
....+..+++.+.+++..||+.+|.+||++.++++.|+.+.+.+..
T Consensus 246 ~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~l~~ 291 (298)
T 3pls_A 246 RLPQPEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSALLG 291 (298)
T ss_dssp CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHCCS
T ss_pred CCCCCccchHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHHhc
Confidence 3344556678899999999999999999999999999999876543
No 175
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=1.7e-39 Score=344.76 Aligned_cols=262 Identities=22% Similarity=0.324 Sum_probs=206.7
Q ss_pred HcCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCC-hhhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEEe
Q 003158 510 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 587 (843)
Q Consensus 510 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e 587 (843)
.++|++.+.||+|+||.||+|... +++.||||++.... ....+.+.+|+++++.++||||+++++++.+.+..++|||
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 85 (276)
T 2yex_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE 85 (276)
T ss_dssp HHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred ecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEE
Confidence 467999999999999999999975 68999999987433 2345788999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCC
Q 003158 588 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 667 (843)
Q Consensus 588 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~ 667 (843)
|+++++|.+++... ..+++..++.++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||.+........
T Consensus 86 ~~~~~~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~ 160 (276)
T 2yex_A 86 YCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR 160 (276)
T ss_dssp CCTTEEGGGGSBTT--TBCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCTTCEECEETTE
T ss_pred ecCCCcHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCChHHEEEccCCCEEEeeCCCccccCCCcc
Confidence 99999999998543 45889999999999999999999999 99999999999999999999999999976532210
Q ss_pred CCcccceeeeeecccCCccCchhcccCCC-CchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhccCCC
Q 003158 668 EGIVPAHVSTVVKGTPGYLDPEYFLTHKL-TDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNM 746 (843)
Q Consensus 668 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 746 (843)
........|++.|+|||.+.+..+ +.++|||||||++|||++|+.||.............
T Consensus 161 -----~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~-------------- 221 (276)
T 2yex_A 161 -----ERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW-------------- 221 (276)
T ss_dssp -----ECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHHH--------------
T ss_pred -----hhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHHh--------------
Confidence 111234568999999999988765 778999999999999999999997543211111100
Q ss_pred CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCCCCccCCCCCcccCC
Q 003158 747 GSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSSD 826 (843)
Q Consensus 747 ~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~sa~e~L~Hp~f~~~ 826 (843)
.. .....+.. +..+....+++.+||..||++|||++|+++||||+..
T Consensus 222 --------------~~-----~~~~~~~~--------------~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~ 268 (276)
T 2yex_A 222 --------------KE-----KKTYLNPW--------------KKIDSAPLALLHKILVENPSARITIPDIKKDRWYNKP 268 (276)
T ss_dssp --------------HT-----TCTTSTTG--------------GGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCTTTTCC
T ss_pred --------------hh-----cccccCch--------------hhcCHHHHHHHHHHCCCCchhCCCHHHHhcCccccCh
Confidence 00 00000000 0111223367888889999999999999999999875
Q ss_pred CC
Q 003158 827 VS 828 (843)
Q Consensus 827 ~~ 828 (843)
..
T Consensus 269 ~~ 270 (276)
T 2yex_A 269 LK 270 (276)
T ss_dssp CC
T ss_pred hh
Confidence 44
No 176
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=9.4e-40 Score=364.92 Aligned_cols=282 Identities=22% Similarity=0.319 Sum_probs=203.4
Q ss_pred HcCCCCCCcccccCCeeEEEEEeCCCcEEEEEEeccCChhhHHHHHHHHHHHHhccCCcccceeeeeecCC------cEE
Q 003158 510 TNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEG------EQM 583 (843)
Q Consensus 510 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~------~~~ 583 (843)
..+|++.+.||+|+||+||+|+..++..||+|++..... ...+|+++++.++||||+++++++...+ ..+
T Consensus 39 ~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~----~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~ 114 (394)
T 4e7w_A 39 EIAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKR----FKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLN 114 (394)
T ss_dssp EEEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTT----SCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEE
T ss_pred cceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcc----hHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEE
Confidence 347889999999999999999987777799998764322 2236999999999999999999985443 378
Q ss_pred EEEecCCCCCHHHHHhh--cCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEc-CCCcEEEeeccccc
Q 003158 584 LVYEFMSNGTLRDQLSA--KSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLD-HKFTAKVADFGLSR 660 (843)
Q Consensus 584 lV~e~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~-~~~~~kl~DfGla~ 660 (843)
+||||++++ +.+.+.. .....+++..++.++.||++||+|||+++ |+||||||+|||++ .++.+||+|||+|+
T Consensus 115 lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~Nill~~~~~~~kL~DFG~a~ 190 (394)
T 4e7w_A 115 LVLEYVPET-VYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIG---ICHRDIKPQNLLLDPPSGVLKLIDFGSAK 190 (394)
T ss_dssp EEEECCSEE-HHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred EEeeccCcc-HHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCCCHHHEEEcCCCCcEEEeeCCCcc
Confidence 999999764 4443332 23456889999999999999999999999 99999999999999 79999999999998
Q ss_pred cCCCCCCCCcccceeeeeecccCCccCchhcccC-CCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccch
Q 003158 661 LAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTH-KLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMF 739 (843)
Q Consensus 661 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~ 739 (843)
...... ......||+.|+|||++.+. .++.++||||+||++|||++|+.||........ ......
T Consensus 191 ~~~~~~--------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~-l~~i~~----- 256 (394)
T 4e7w_A 191 ILIAGE--------PNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQ-LVEIIK----- 256 (394)
T ss_dssp ECCTTC--------CCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHHHHH-----
T ss_pred cccCCC--------CCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHH-----
Confidence 764321 12345689999999999765 589999999999999999999999976553222 111110
Q ss_pred hhccCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCH-HHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCCCCccCC
Q 003158 740 SVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSM-SEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSML 818 (843)
Q Consensus 740 ~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~-~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~sa~e~L 818 (843)
. .+..+.+....... ...-..-|..++.. ..+ ..+...+.+.+|+.+||++||++|+|++|+|
T Consensus 257 -~----~g~p~~~~~~~~~~--~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l 320 (394)
T 4e7w_A 257 -V----LGTPSREQIKTMNP--NYMEHKFPQIRPHPFSKV---------FRPRTPPDAIDLISRLLEYTPSARLTAIEAL 320 (394)
T ss_dssp -H----HCCCCHHHHHHHCG--GGSSSCCCCCCCCCHHHH---------SCTTCCHHHHHHHHHHCCSSGGGSCCHHHHH
T ss_pred -H----hCCCCHHHHHhhCh--hhhhhccccccCCcHHHh---------ccccCCHHHHHHHHHHhCCChhhCCCHHHHh
Confidence 0 01111111111000 00001112222211 110 1122345567899999999999999999999
Q ss_pred CCCcccCCCCC
Q 003158 819 KHPYVSSDVSG 829 (843)
Q Consensus 819 ~Hp~f~~~~~~ 829 (843)
+||||++-...
T Consensus 321 ~hp~f~~~~~~ 331 (394)
T 4e7w_A 321 CHPFFDELRTG 331 (394)
T ss_dssp TSGGGSTTTSS
T ss_pred cChhhhhhccc
Confidence 99999875443
No 177
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=3e-39 Score=354.28 Aligned_cols=251 Identities=23% Similarity=0.336 Sum_probs=199.2
Q ss_pred HcCCCCCCcccccCCeeEEEEEeCCCcEEEEEEeccCC--hhhHHHHHHHHHHHHhccC--CcccceeeeeecCCcEEEE
Q 003158 510 TNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHH--RNLVSLVGYCDEEGEQMLV 585 (843)
Q Consensus 510 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h--~nIv~l~~~~~~~~~~~lV 585 (843)
.++|++.+.||+|+||+||+|...+++.||||++.... ....+.+.+|+++++.++| +||+++++++.+++..++|
T Consensus 8 ~~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv 87 (343)
T 3dbq_A 8 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV 87 (343)
T ss_dssp SCEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred cCEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEE
Confidence 45788999999999999999998889999999987543 3334678999999999976 9999999999999999999
Q ss_pred EecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCC
Q 003158 586 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVP 665 (843)
Q Consensus 586 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~ 665 (843)
||+ .+|+|.+++... ..+++..+..++.||++||+|||+++ |+||||||+|||++ ++.+||+|||+++.....
T Consensus 88 ~e~-~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~al~~lH~~~---iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~ 160 (343)
T 3dbq_A 88 MEC-GNIDLNSWLKKK--KSIDPWERKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIV-DGMLKLIDFGIANQMQPD 160 (343)
T ss_dssp ECC-CSEEHHHHHHHS--CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEEE-TTEEEECCCSSSCCC---
T ss_pred EeC-CCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCcceEEEE-CCcEEEeecccccccCcc
Confidence 995 588999999764 35888999999999999999999999 99999999999997 678999999999876432
Q ss_pred CCCCcccceeeeeecccCCccCchhccc-----------CCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhh
Q 003158 666 DIEGIVPAHVSTVVKGTPGYLDPEYFLT-----------HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQ 734 (843)
Q Consensus 666 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----------~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~ 734 (843)
.. ........||+.|+|||++.+ ..++.++|||||||++|||++|+.||....+.......
T Consensus 161 ~~-----~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~--- 232 (343)
T 3dbq_A 161 TT-----SVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHA--- 232 (343)
T ss_dssp --------------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHH---
T ss_pred cc-----cccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHHHHHHH---
Confidence 21 112234579999999999975 67889999999999999999999999765443332222
Q ss_pred cccchhhccC-CCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 003158 735 SSMMFSVIDG-NMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRE 781 (843)
Q Consensus 735 ~~~~~~~~~~-~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~ 781 (843)
.++. ....++...+..+.+++..||+.+|.+||++.++++.
T Consensus 233 ------~~~~~~~~~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~h 274 (343)
T 3dbq_A 233 ------IIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH 274 (343)
T ss_dssp ------HHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred ------HhcCCcccCCcccCCHHHHHHHHHHcCCChhHCCCHHHHHhC
Confidence 1111 1223344455678888899999999999999888764
No 178
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=5.7e-40 Score=369.75 Aligned_cols=278 Identities=21% Similarity=0.289 Sum_probs=199.8
Q ss_pred cCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCChhhHHHHHHHHHHHHhccCCcccceeeeeecC------CcEE
Q 003158 511 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE------GEQM 583 (843)
Q Consensus 511 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~------~~~~ 583 (843)
.+|++.+.||+|+||+||+|++. +|+.||||++..... ...+|+++++.++||||++++++|... ...+
T Consensus 54 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~----~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~ 129 (420)
T 1j1b_A 54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR----FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLN 129 (420)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTT----SCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEE
T ss_pred ceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccch----hHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEE
Confidence 46888999999999999999975 699999999875322 234699999999999999999998432 2367
Q ss_pred EEEecCCCCCHHHHHhh--cCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCC-CcEEEeeccccc
Q 003158 584 LVYEFMSNGTLRDQLSA--KSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHK-FTAKVADFGLSR 660 (843)
Q Consensus 584 lV~e~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~-~~~kl~DfGla~ 660 (843)
+||||+++ ++.+.+.. .....+++..++.++.||++||+|||+++ |+||||||+|||++.+ +.+||+|||+++
T Consensus 130 lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NILl~~~~~~~kl~DFG~a~ 205 (420)
T 1j1b_A 130 LVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK 205 (420)
T ss_dssp EEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTT---EECSCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred eehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCChhhEEEeCCCCeEEeccchhhh
Confidence 99999974 77776653 33456899999999999999999999999 9999999999999965 678999999998
Q ss_pred cCCCCCCCCcccceeeeeecccCCccCchhcccC-CCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccch
Q 003158 661 LAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTH-KLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMF 739 (843)
Q Consensus 661 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~ 739 (843)
...... ......||+.|+|||++.+. .++.++|||||||++|||++|+.||....... ++.....
T Consensus 206 ~~~~~~--------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~-~l~~i~~----- 271 (420)
T 1j1b_A 206 QLVRGE--------PNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVD-QLVEIIK----- 271 (420)
T ss_dssp ECCTTC--------CCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHH-----
T ss_pred hcccCC--------CceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHH-----
Confidence 654321 12345689999999999765 78999999999999999999999997654322 2211110
Q ss_pred hhccCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhC-CCCCCCCCccccCCCCCCCCCCCCCccCC
Q 003158 740 SVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMM-PESDTKTPEFINSEHTSKEETPPSSSSML 818 (843)
Q Consensus 740 ~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~-~~~~~~~~dll~~~L~~dp~~R~sa~e~L 818 (843)
. .+....+....+ .-......-|.... ..+...+ +...+.+.+||.+||++||++|+|++|+|
T Consensus 272 -~----lg~p~~~~~~~~------~~~~~~~~~p~~~~-----~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l 335 (420)
T 1j1b_A 272 -V----LGTPTREQIREM------NPNYTEFKFPQIKA-----HPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEAC 335 (420)
T ss_dssp -H----HCSCCHHHHHHH------CSCCCCCCCCCCCC-----CCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHH
T ss_pred -H----hCCCCHHHHHhh------ChhhhhhccCccCC-----CCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHh
Confidence 0 011111111110 00000000010000 0000011 22334566899999999999999999999
Q ss_pred CCCcccCC
Q 003158 819 KHPYVSSD 826 (843)
Q Consensus 819 ~Hp~f~~~ 826 (843)
+||||..-
T Consensus 336 ~hp~f~~~ 343 (420)
T 1j1b_A 336 AHSFFDEL 343 (420)
T ss_dssp TSGGGGGG
T ss_pred CCHhhccc
Confidence 99999653
No 179
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=2.2e-39 Score=352.87 Aligned_cols=258 Identities=26% Similarity=0.427 Sum_probs=205.2
Q ss_pred HcCCCCCCcccccCCeeEEEEEeC-CCc----EEEEEEeccC-ChhhHHHHHHHHHHHHhccCCcccceeeeeecCCcEE
Q 003158 510 TNNFNSSTQIGQGGYGKVYKGILP-DGT----VVAVKRAQEG-SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQM 583 (843)
Q Consensus 510 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~----~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~ 583 (843)
.++|++.+.||+|+||+||+|.+. +++ .||+|.+... .....+++.+|+++++.++||||+++++++... ..+
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~-~~~ 92 (327)
T 3lzb_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQ 92 (327)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESS-SEE
T ss_pred HhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecC-Cce
Confidence 467899999999999999999964 444 3577777543 233467899999999999999999999999865 488
Q ss_pred EEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCC
Q 003158 584 LVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAP 663 (843)
Q Consensus 584 lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~ 663 (843)
+|+||+++|+|.+++.... ..+++..++.++.|+++||.|||+++ |+||||||+|||++.++.+||+|||+++...
T Consensus 93 ~v~~~~~~g~L~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~ 168 (327)
T 3lzb_A 93 LITQLMPFGCLLDYVREHK-DNIGSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLG 168 (327)
T ss_dssp EEECCCSSCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEEETTEEEECCTTC-----
T ss_pred EEEEecCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHhhCC---CcCCCCCHHHEEEcCCCCEEEccCcceeEcc
Confidence 9999999999999997643 45889999999999999999999999 9999999999999999999999999998764
Q ss_pred CCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHh-CCCCCCCCcchHHHHHHHhhcccchhhc
Q 003158 664 VPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVI 742 (843)
Q Consensus 664 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 742 (843)
.... ........+|+.|+|||.+.+..++.++|||||||++|||++ |+.||.......- ...+.
T Consensus 169 ~~~~-----~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~----------~~~~~ 233 (327)
T 3lzb_A 169 AEEK-----EYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI----------SSILE 233 (327)
T ss_dssp ----------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGH----------HHHHH
T ss_pred Cccc-----cccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHHH----------HHHHH
Confidence 3221 112233456788999999999999999999999999999999 9999976543111 01112
Q ss_pred cCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhh
Q 003158 743 DGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWN 787 (843)
Q Consensus 743 ~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~ 787 (843)
.+.....+..++..+.+++..||+.+|.+||++.++++.|+.+..
T Consensus 234 ~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~ 278 (327)
T 3lzb_A 234 KGERLPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMAR 278 (327)
T ss_dssp TTCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHT
T ss_pred cCCCCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHh
Confidence 222334566677889999999999999999999999999998764
No 180
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=1e-39 Score=375.96 Aligned_cols=256 Identities=24% Similarity=0.388 Sum_probs=199.8
Q ss_pred HcCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCC--hhhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEE
Q 003158 510 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 586 (843)
Q Consensus 510 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~ 586 (843)
.++|++.+.||+|+||+||+|... +++.||+|++.... ......+.+|+++++.++||||+++++++.+.+..++||
T Consensus 36 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 115 (494)
T 3lij_A 36 SEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVM 115 (494)
T ss_dssp HHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 457999999999999999999975 68999999987543 223467899999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCC---CcEEEeeccccccCC
Q 003158 587 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHK---FTAKVADFGLSRLAP 663 (843)
Q Consensus 587 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~---~~~kl~DfGla~~~~ 663 (843)
||+++|+|.+++.... .+++..++.++.||++||+|||+++ |+||||||+|||++.. +.+||+|||+++...
T Consensus 116 e~~~~g~L~~~~~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~ 190 (494)
T 3lij_A 116 ECYKGGELFDEIIHRM--KFNEVDAAVIIKQVLSGVTYLHKHN---IVHRDLKPENLLLESKEKDALIKIVDFGLSAVFE 190 (494)
T ss_dssp ECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESCSSTTCCEEECCCTTCEECB
T ss_pred ecCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCChhhEEEeCCCCCCcEEEEECCCCeECC
Confidence 9999999999887653 4889999999999999999999999 9999999999999764 459999999998764
Q ss_pred CCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhcc
Q 003158 664 VPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVID 743 (843)
Q Consensus 664 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 743 (843)
.. .......||+.|+|||++. ..++.++||||+||++|+|++|+.||...... .....
T Consensus 191 ~~--------~~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~-~~~~~------------ 248 (494)
T 3lij_A 191 NQ--------KKMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQ-EILRK------------ 248 (494)
T ss_dssp TT--------BCBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHH------------
T ss_pred CC--------ccccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHH------------
Confidence 32 1223456999999999986 56899999999999999999999999754321 11110
Q ss_pred CCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCCCCccCCCCCcc
Q 003158 744 GNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYV 823 (843)
Q Consensus 744 ~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~sa~e~L~Hp~f 823 (843)
+........ .|. ++..++.+.+|+++||+.||++|||++|+|+||||
T Consensus 249 ----------------i~~~~~~~~---~~~--------------~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~hp~~ 295 (494)
T 3lij_A 249 ----------------VEKGKYTFD---SPE--------------WKNVSEGAKDLIKQMLQFDSQRRISAQQALEHPWI 295 (494)
T ss_dssp ----------------HHHTCCCCC---SGG--------------GTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTCHHH
T ss_pred ----------------HHhCCCCCC---chh--------------cccCCHHHHHHHHHHCCCChhhCccHHHHhcCccc
Confidence 000000000 000 01112233478888999999999999999999999
Q ss_pred cC
Q 003158 824 SS 825 (843)
Q Consensus 824 ~~ 825 (843)
+.
T Consensus 296 ~~ 297 (494)
T 3lij_A 296 KE 297 (494)
T ss_dssp HH
T ss_pred cc
Confidence 65
No 181
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=1.5e-39 Score=346.41 Aligned_cols=251 Identities=27% Similarity=0.412 Sum_probs=208.7
Q ss_pred HHcCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCChhhHHHHHHHHHHHHhccCCcccceeeeeec---------
Q 003158 509 ATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDE--------- 578 (843)
Q Consensus 509 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~--------- 578 (843)
..++|++.+.||+|+||.||+|... +++.||+|++.... +.+.+|+++++.++||||+++++++..
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~ 84 (284)
T 2a19_B 9 FGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSS 84 (284)
T ss_dssp HHHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC-----
T ss_pred hccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCccccc
Confidence 4567999999999999999999975 79999999997543 356789999999999999999998854
Q ss_pred -------CCcEEEEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcE
Q 003158 579 -------EGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTA 651 (843)
Q Consensus 579 -------~~~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~ 651 (843)
....++||||+++|+|.+++.......+++..++.++.|+++||.|||+++ |+||||||+||++++++.+
T Consensus 85 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~ 161 (284)
T 2a19_B 85 KNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKK---LINRDLKPSNIFLVDTKQV 161 (284)
T ss_dssp ----CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEETTEE
T ss_pred ccccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeeccCCHHHEEEcCCCCE
Confidence 445899999999999999998765567899999999999999999999999 9999999999999999999
Q ss_pred EEeeccccccCCCCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHH
Q 003158 652 KVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNI 731 (843)
Q Consensus 652 kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~ 731 (843)
||+|||++....... ......|++.|+|||.+.+..++.++|||||||++|||++|..|+........
T Consensus 162 kl~Dfg~~~~~~~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~---- 229 (284)
T 2a19_B 162 KIGDFGLVTSLKNDG--------KRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETSKFFT---- 229 (284)
T ss_dssp EECCCTTCEESSCCS--------CCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHHHHHHH----
T ss_pred EECcchhheeccccc--------cccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhHHHHHH----
Confidence 999999998764321 12334689999999999999999999999999999999999988743211111
Q ss_pred HhhcccchhhccCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhC
Q 003158 732 AYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMM 789 (843)
Q Consensus 732 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~ 789 (843)
.+..+ ..+..++..+.+++.+||+.+|.+||++.++++.++.+.+..
T Consensus 230 --------~~~~~---~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~~~ 276 (284)
T 2a19_B 230 --------DLRDG---IISDIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKSP 276 (284)
T ss_dssp --------HHHTT---CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC--
T ss_pred --------Hhhcc---cccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhhCC
Confidence 01111 123344567889999999999999999999999999886543
No 182
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=5.6e-40 Score=356.15 Aligned_cols=287 Identities=22% Similarity=0.359 Sum_probs=206.4
Q ss_pred HcCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCChhhHHHHHHHHHHHHhccCCcccceeeeee-----------
Q 003158 510 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCD----------- 577 (843)
Q Consensus 510 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~----------- 577 (843)
.++|++.+.||+|+||.||+|... +++.||+|++........+++.+|+++++.++||||+++++++.
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 89 (320)
T 2i6l_A 10 GSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVG 89 (320)
T ss_dssp TTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC---
T ss_pred CCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccccc
Confidence 367899999999999999999976 58999999998766666778999999999999999999999873
Q ss_pred ---cCCcEEEEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEc-CCCcEEE
Q 003158 578 ---EEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLD-HKFTAKV 653 (843)
Q Consensus 578 ---~~~~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~-~~~~~kl 653 (843)
+....++||||++ |+|.+++.. .++++..++.++.|+++||+|||+++ |+||||||+||+++ +++.+||
T Consensus 90 ~~~~~~~~~lv~e~~~-~~L~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~kl 162 (320)
T 2i6l_A 90 SLTELNSVYIVQEYME-TDLANVLEQ---GPLLEEHARLFMYQLLRGLKYIHSAN---VLHRDLKPANLFINTEDLVLKI 162 (320)
T ss_dssp -CCSCSEEEEEEECCS-EEHHHHHTT---CCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCSGGGEEEETTTTEEEE
T ss_pred cccccCceeEEeeccC-CCHHHHhhc---CCccHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEEcCCCCeEEE
Confidence 3467899999997 699999954 35889999999999999999999999 99999999999997 5679999
Q ss_pred eeccccccCCCCCCCCcccceeeeeecccCCccCchhccc-CCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHH
Q 003158 654 ADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIA 732 (843)
Q Consensus 654 ~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~ 732 (843)
+|||+++....... .........++..|+|||.+.+ ..++.++|||||||++|||++|+.||........ ....
T Consensus 163 ~Dfg~~~~~~~~~~----~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~-~~~~ 237 (320)
T 2i6l_A 163 GDFGLARIMDPHYS----HKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQ-MQLI 237 (320)
T ss_dssp CCCTTCBCC------------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHHH
T ss_pred ccCccccccCCCcc----cccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHH-HHHH
Confidence 99999987542211 0112234457899999999876 6789999999999999999999999986553221 1111
Q ss_pred hhcccchhhccCCCCCCCHHHHHHHHHHHHHhcccC-CCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCC
Q 003158 733 YQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDE-TDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETP 811 (843)
Q Consensus 733 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~-p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R 811 (843)
.. ..+....+...++...+...+..+ ...+.... ...+.....+.+|+.+||+.||++|
T Consensus 238 ~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~li~~~L~~dP~~R 297 (320)
T 2i6l_A 238 LE----------SIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLT----------QLLPGISREAVDFLEQILTFSPMDR 297 (320)
T ss_dssp HH----------HSCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHH----------HHSTTCCHHHHHHHHTTSCSSGGGS
T ss_pred HH----------hcCCCchhhhhhhhhcCcccccccccCCCCChh----------HhcchhhHHHHHHHHHHcCCCcccc
Confidence 10 011122222222211100000000 00111111 1123334456689999999999999
Q ss_pred CCCccCCCCCcccCCCC
Q 003158 812 PSSSSMLKHPYVSSDVS 828 (843)
Q Consensus 812 ~sa~e~L~Hp~f~~~~~ 828 (843)
||++|+|+||||+....
T Consensus 298 pt~~ell~hp~~~~~~~ 314 (320)
T 2i6l_A 298 LTAEEALSHPYMSIYSF 314 (320)
T ss_dssp CCHHHHHTSHHHHTTCC
T ss_pred CCHHHHhCCcccccccC
Confidence 99999999999986543
No 183
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=6.2e-40 Score=363.69 Aligned_cols=275 Identities=22% Similarity=0.358 Sum_probs=206.5
Q ss_pred HcCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCC--hhhHHHHHHHHHHHHhccCCcccceeeeeecCCcE----
Q 003158 510 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQ---- 582 (843)
Q Consensus 510 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~---- 582 (843)
.++|.+.+.||+|+||+||+|... +|+.||||++.... ....+++.+|+.+++.++||||+++++++...+..
T Consensus 41 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 120 (371)
T 4exu_A 41 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 120 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCC
T ss_pred cccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccce
Confidence 357888999999999999999964 68999999997542 23357789999999999999999999999876654
Q ss_pred --EEEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccc
Q 003158 583 --MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSR 660 (843)
Q Consensus 583 --~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~ 660 (843)
++||||+. ++|.+++.. .+++..++.++.|++.||+|||+++ |+||||||+||+++.++.+||+|||+++
T Consensus 121 ~~~lv~e~~~-~~l~~~~~~----~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIll~~~~~~kL~Dfg~a~ 192 (371)
T 4exu_A 121 DFYLVMPFMQ-TDLQKIMGM----EFSEEKIQYLVYQMLKGLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLAR 192 (371)
T ss_dssp CCEEEEECCC-EEHHHHTTS----CCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCEEECSTTCC-
T ss_pred eEEEEEcccc-ccHHHHhhc----CCCHHHHHHHHHHHHHHHHHHHHCC---CcCCCcCHHHeEECCCCCEEEEecCccc
Confidence 99999996 689888732 3889999999999999999999999 9999999999999999999999999998
Q ss_pred cCCCCCCCCcccceeeeeecccCCccCchhccc-CCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccch
Q 003158 661 LAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMF 739 (843)
Q Consensus 661 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~ 739 (843)
.... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||....... ........
T Consensus 193 ~~~~----------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-~~~~i~~~---- 257 (371)
T 4exu_A 193 HADA----------EMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLD-QLTQILKV---- 257 (371)
T ss_dssp -----------------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHH----
T ss_pred cccc----------CcCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHH----
Confidence 6432 1234568999999999987 788999999999999999999999997654322 22111100
Q ss_pred hhccCCCCCCCHHHHHH-----HHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCCCC
Q 003158 740 SVIDGNMGSYPSECVEK-----FIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSS 814 (843)
Q Consensus 740 ~~~~~~~~~~~~~~~~~-----l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~sa 814 (843)
. +..+.+.... ....... .....+....+ ..+..++.+.+|+.+||+.||++|||+
T Consensus 258 --~----~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~----------~~~~~~~~~~~li~~~L~~dP~~Rpt~ 318 (371)
T 4exu_A 258 --T----GVPGTEFVQKLNDKAAKSYIQS---LPQTPRKDFTQ----------LFPRASPQAADLLEKMLELDVDKRLTA 318 (371)
T ss_dssp --H----CCCCHHHHTTCSCHHHHHHHHH---SCCCCCCCHHH----------HSTTSCHHHHHHHHHHSCSCTTTSCCH
T ss_pred --h----CCCcHHHHHHhhhhhhhhhhhc---cCCCcchhHHH----------hccccChHHHHHHHHHCCCChhhcCCH
Confidence 0 0111111111 0011111 11111222221 223445566789999999999999999
Q ss_pred ccCCCCCcccCC
Q 003158 815 SSMLKHPYVSSD 826 (843)
Q Consensus 815 ~e~L~Hp~f~~~ 826 (843)
+|+|+||||+.-
T Consensus 319 ~ell~hp~f~~~ 330 (371)
T 4exu_A 319 AQALTHPFFEPF 330 (371)
T ss_dssp HHHHTSGGGTTT
T ss_pred HHHhcCcccccC
Confidence 999999999753
No 184
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=1.1e-39 Score=376.69 Aligned_cols=258 Identities=26% Similarity=0.362 Sum_probs=204.1
Q ss_pred HcCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCCh-------------hhHHHHHHHHHHHHhccCCcccceeee
Q 003158 510 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL-------------QGEKEFLTEIQFLSRLHHRNLVSLVGY 575 (843)
Q Consensus 510 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-------------~~~~~~~~E~~~l~~l~h~nIv~l~~~ 575 (843)
.++|.+.+.||+|+||+||+|... +++.||+|++..... ...+.+.+|+++++.++||||++++++
T Consensus 35 ~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~ 114 (504)
T 3q5i_A 35 GESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDV 114 (504)
T ss_dssp GGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred ccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEE
Confidence 568999999999999999999965 689999999875332 224678999999999999999999999
Q ss_pred eecCCcEEEEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCC---cEE
Q 003158 576 CDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKF---TAK 652 (843)
Q Consensus 576 ~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~---~~k 652 (843)
+.+.+..++||||+++|+|.+++.... .+++..++.++.||+.||+|||+++ |+||||||+|||++.++ .+|
T Consensus 115 ~~~~~~~~lv~e~~~gg~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~k 189 (504)
T 3q5i_A 115 FEDKKYFYLVTEFYEGGELFEQIINRH--KFDECDAANIMKQILSGICYLHKHN---IVHRDIKPENILLENKNSLLNIK 189 (504)
T ss_dssp EECSSEEEEEEECCTTCBHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESSTTCCSSEE
T ss_pred EEcCCEEEEEEecCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCcHHHEEEecCCCCccEE
Confidence 999999999999999999999987653 4889999999999999999999999 99999999999999776 699
Q ss_pred EeeccccccCCCCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHH
Q 003158 653 VADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIA 732 (843)
Q Consensus 653 l~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~ 732 (843)
|+|||+++..... .......||+.|+|||++. ..++.++||||+||++|+|++|+.||...... .....
T Consensus 190 l~Dfg~a~~~~~~--------~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~-~~~~~- 258 (504)
T 3q5i_A 190 IVDFGLSSFFSKD--------YKLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQ-DIIKK- 258 (504)
T ss_dssp ECCCTTCEECCTT--------SCBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHH-
T ss_pred EEECCCCEEcCCC--------CccccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHH-
Confidence 9999999876432 1223456999999999987 46899999999999999999999999754321 11110
Q ss_pred hhcccchhhccCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCC
Q 003158 733 YQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPP 812 (843)
Q Consensus 733 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~ 812 (843)
+..+. ..++. . .++..++.+.+|+++||+.||++||
T Consensus 259 --------i~~~~-~~~~~------------------------~-----------~~~~~s~~~~~li~~~L~~dp~~R~ 294 (504)
T 3q5i_A 259 --------VEKGK-YYFDF------------------------N-----------DWKNISDEAKELIKLMLTYDYNKRC 294 (504)
T ss_dssp --------HHHCC-CCCCH------------------------H-----------HHTTSCHHHHHHHHHHTCSSTTTSC
T ss_pred --------HHcCC-CCCCc------------------------c-----------ccCCCCHHHHHHHHHHcCCChhHCC
Confidence 00000 00110 0 0012233345788999999999999
Q ss_pred CCccCCCCCcccCCC
Q 003158 813 SSSSMLKHPYVSSDV 827 (843)
Q Consensus 813 sa~e~L~Hp~f~~~~ 827 (843)
|++|+|+||||+...
T Consensus 295 t~~e~l~h~~~~~~~ 309 (504)
T 3q5i_A 295 TAEEALNSRWIKKYA 309 (504)
T ss_dssp CHHHHHTSHHHHHTC
T ss_pred CHHHHhcCHhhhhch
Confidence 999999999997644
No 185
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=4.1e-40 Score=358.42 Aligned_cols=295 Identities=24% Similarity=0.352 Sum_probs=210.9
Q ss_pred HHcCCCCCCcccccCCeeEEEEEe--CCCcEEEEEEeccCChh--hHHHHHHHHHHHHhc---cCCcccceeeeee----
Q 003158 509 ATNNFNSSTQIGQGGYGKVYKGIL--PDGTVVAVKRAQEGSLQ--GEKEFLTEIQFLSRL---HHRNLVSLVGYCD---- 577 (843)
Q Consensus 509 ~~~~~~~~~~lg~G~~g~Vy~~~~--~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l---~h~nIv~l~~~~~---- 577 (843)
..++|++.+.||+|+||+||+|.. .+++.||+|++...... ....+.+|+++++.+ +||||+++++++.
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~ 88 (326)
T 1blx_A 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT 88 (326)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC
T ss_pred chhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeeccc
Confidence 357899999999999999999997 46889999998643221 123566788777766 8999999999986
Q ss_pred -cCCcEEEEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeec
Q 003158 578 -EEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADF 656 (843)
Q Consensus 578 -~~~~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~Df 656 (843)
.....++||||++ |+|.+++.......+++..++.++.|+++||.|||+++ |+||||||+||+++.++.+||+||
T Consensus 89 ~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~g---i~H~dlkp~Nili~~~~~~kl~Df 164 (326)
T 1blx_A 89 DRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADF 164 (326)
T ss_dssp SSEEEEEEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEEECSC
T ss_pred CCCceEEEEEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCCHHHeEEcCCCCEEEecC
Confidence 5567899999997 69999998766667899999999999999999999999 999999999999999999999999
Q ss_pred cccccCCCCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcc
Q 003158 657 GLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSS 736 (843)
Q Consensus 657 Gla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~ 736 (843)
|+++..... .......||+.|+|||++.+..++.++|||||||++|||++|+.||........ ........
T Consensus 165 g~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-~~~i~~~~ 235 (326)
T 1blx_A 165 GLARIYSFQ--------MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQ-LGKILDVI 235 (326)
T ss_dssp CSCCCCCGG--------GGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHHHHHHH
T ss_pred cccccccCC--------CCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHH-HHHHHHHc
Confidence 999765321 122345689999999999999999999999999999999999999976543221 11111000
Q ss_pred cchhhccCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCCCCcc
Q 003158 737 MMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSS 816 (843)
Q Consensus 737 ~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~sa~e 816 (843)
. .+.....+... ......+.. ...+. +....+..+....+|+.+||..||++|||++|
T Consensus 236 ~-----~~~~~~~~~~~-----~~~~~~~~~--~~~~~----------~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e 293 (326)
T 1blx_A 236 G-----LPGEEDWPRDV-----ALPRQAFHS--KSAQP----------IEKFVTDIDELGKDLLLKCLTFNPAKRISAYS 293 (326)
T ss_dssp C-----CCCGGGSCTTC-----SSCGGGSCC--CCCCC----------GGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHH
T ss_pred C-----CCCcccCcccc-----ccchhhhcc--cCcch----------hhhccccCCHHHHHHHHHHcCCCcccCCCHHH
Confidence 0 00000000000 000000000 00000 01112223334457999999999999999999
Q ss_pred CCCCCcccCCCCCCccccccCC
Q 003158 817 MLKHPYVSSDVSGSNLVSGVIP 838 (843)
Q Consensus 817 ~L~Hp~f~~~~~~~~~~~~~~~ 838 (843)
+|+||||+........+....|
T Consensus 294 ~l~hp~~~~~~~~~~~~~~~~~ 315 (326)
T 1blx_A 294 ALSHPYFQDLERCKENLDSHLP 315 (326)
T ss_dssp HHTSGGGTTCCCCCCC------
T ss_pred HhcCccccccchhhhhhccCCC
Confidence 9999999876654444443333
No 186
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=1.5e-39 Score=347.74 Aligned_cols=259 Identities=20% Similarity=0.317 Sum_probs=189.3
Q ss_pred HcCCCCCCcccccCCeeEEEEEe-CCCcEEEEEEeccCChh-hH-HHHHHHHHHHHhccCCcccceeeeeecCCcEEEEE
Q 003158 510 TNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQ-GE-KEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 586 (843)
Q Consensus 510 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~-~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~ 586 (843)
.++|++.+.||+|+||+||+|.. .+++.||+|++...... .. +.+.++...++.++||||+++++++.+++..++||
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~ 85 (290)
T 3fme_A 6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICM 85 (290)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEE
T ss_pred HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEE
Confidence 46899999999999999999996 47999999999754322 22 33445555688889999999999999999999999
Q ss_pred ecCCCCCHHHHHhh--cCCCCcchhHHHHHHHHHHHHHHHHhcC-CCCCEEeccCCCCcEEEcCCCcEEEeeccccccCC
Q 003158 587 EFMSNGTLRDQLSA--KSKEPLGFAMRLSIALGSSRGILYLHTE-ADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAP 663 (843)
Q Consensus 587 e~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~~ia~aL~yLH~~-~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~ 663 (843)
||++ |+|.+++.. .....+++..++.++.|++.||+|||++ + |+||||||+||+++.++.+||+|||+++...
T Consensus 86 e~~~-~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 161 (290)
T 3fme_A 86 ELMD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLS---VIHRDVKPSNVLINALGQVKMCDFGISGYLV 161 (290)
T ss_dssp ECCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHSC---CCCCCCSGGGCEECTTCCEEBCCC-------
T ss_pred ehhc-cchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCC---eecCCCCHHHEEECCCCCEEEeecCCccccc
Confidence 9996 599888764 2345689999999999999999999998 8 9999999999999999999999999998654
Q ss_pred CCCCCCcccceeeeeecccCCccCchhc----ccCCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccch
Q 003158 664 VPDIEGIVPAHVSTVVKGTPGYLDPEYF----LTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMF 739 (843)
Q Consensus 664 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~----~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~ 739 (843)
.. .......||+.|+|||++ .+..++.++|||||||++|||++|+.||...............
T Consensus 162 ~~--------~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~----- 228 (290)
T 3fme_A 162 DD--------VAKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVE----- 228 (290)
T ss_dssp ----------------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHHH-----
T ss_pred cc--------ccccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHHHHHHhc-----
Confidence 32 112334689999999996 4567899999999999999999999999754332222211110
Q ss_pred hhccCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCCCCccCCC
Q 003158 740 SVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLK 819 (843)
Q Consensus 740 ~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~sa~e~L~ 819 (843)
...... +.. ..+..+.+++.+||+.||++|||++|+++
T Consensus 229 ----~~~~~~-------------------~~~-------------------~~~~~~~~li~~~l~~~p~~Rpt~~e~l~ 266 (290)
T 3fme_A 229 ----EPSPQL-------------------PAD-------------------KFSAEFVDFTSQCLKKNSKERPTYPELMQ 266 (290)
T ss_dssp ----SCCCCC-------------------CTT-------------------TSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred ----cCCCCc-------------------ccc-------------------cCCHHHHHHHHHHhhcChhhCcCHHHHHh
Confidence 000000 000 01112335777788888999999999999
Q ss_pred CCcccCCC
Q 003158 820 HPYVSSDV 827 (843)
Q Consensus 820 Hp~f~~~~ 827 (843)
||||+...
T Consensus 267 hp~f~~~~ 274 (290)
T 3fme_A 267 HPFFTLHE 274 (290)
T ss_dssp SHHHHHHH
T ss_pred CcccccCc
Confidence 99997543
No 187
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=7.3e-39 Score=346.07 Aligned_cols=262 Identities=23% Similarity=0.360 Sum_probs=204.1
Q ss_pred cCCCCCCcccccCCeeEEEEEe-CCCcEEEEEEeccC---ChhhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEE
Q 003158 511 NNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEG---SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 586 (843)
Q Consensus 511 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~ 586 (843)
++|++.+.||+|+||.||+|.. .+|+.||||++... .....+++.+|+++++.++||||+++++++.+.+..++||
T Consensus 32 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 111 (310)
T 2wqm_A 32 ANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL 111 (310)
T ss_dssp GGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred cceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEEE
Confidence 5788999999999999999996 47999999998753 2334567899999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhh--cCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCC
Q 003158 587 EFMSNGTLRDQLSA--KSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPV 664 (843)
Q Consensus 587 e~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~ 664 (843)
||+++|+|.+++.. .....+++..++.++.|+++||.|||+.+ |+||||||+||+++.++.+||+|||++.....
T Consensus 112 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~~ 188 (310)
T 2wqm_A 112 ELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRR---VMHRDIKPANVFITATGVVKLGDLGLGRFFSS 188 (310)
T ss_dssp ECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCC--------
T ss_pred ecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhCC---eeCCCCcHHHEEEcCCCCEEEEeccceeeecC
Confidence 99999999999865 23456889999999999999999999999 99999999999999999999999999976542
Q ss_pred CCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhccC
Q 003158 665 PDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDG 744 (843)
Q Consensus 665 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 744 (843)
.. .......|++.|+|||.+.+..++.++|||||||++|||++|+.||.............. ...
T Consensus 189 ~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~--------~~~ 253 (310)
T 2wqm_A 189 KT-------TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKI--------EQC 253 (310)
T ss_dssp -----------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CCHHHHHHHH--------HTT
T ss_pred CC-------ccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchhHHHHHHHh--------hcc
Confidence 21 112345689999999999999999999999999999999999999975432222111111 111
Q ss_pred CCCC-CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCC
Q 003158 745 NMGS-YPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMP 790 (843)
Q Consensus 745 ~~~~-~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~ 790 (843)
.... .+..+++++.+++..||+.+|.+||++.++++.|+++....+
T Consensus 254 ~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~~~~ 300 (310)
T 2wqm_A 254 DYPPLPSDHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHACTA 300 (310)
T ss_dssp CSCCCCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC
T ss_pred cCCCCcccccCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhhh
Confidence 1121 224566789999999999999999999999999999876543
No 188
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=7.1e-40 Score=359.58 Aligned_cols=268 Identities=18% Similarity=0.168 Sum_probs=201.0
Q ss_pred HcCCCCCCcccccCCeeEEEEEeC----CCcEEEEEEeccCChhh-----------HHHHHHHHHHHHhccCCcccceee
Q 003158 510 TNNFNSSTQIGQGGYGKVYKGILP----DGTVVAVKRAQEGSLQG-----------EKEFLTEIQFLSRLHHRNLVSLVG 574 (843)
Q Consensus 510 ~~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~-----------~~~~~~E~~~l~~l~h~nIv~l~~ 574 (843)
.++|.+.+.||+|+||+||+|... ++..||||+........ ...+.+|+..++.++||||+++++
T Consensus 36 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~ 115 (345)
T 2v62_A 36 GNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYG 115 (345)
T ss_dssp SCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEE
T ss_pred CceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeec
Confidence 357889999999999999999975 57889999987543211 134667888999999999999999
Q ss_pred eeec----CCcEEEEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCC-
Q 003158 575 YCDE----EGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKF- 649 (843)
Q Consensus 575 ~~~~----~~~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~- 649 (843)
++.. ....++||||+ +++|.+++.... .+++..++.++.||++||+|||+++ |+||||||+|||++.++
T Consensus 116 ~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~ 189 (345)
T 2v62_A 116 SGLTEFKGRSYRFMVMERL-GIDLQKISGQNG--TFKKSTVLQLGIRMLDVLEYIHENE---YVHGDIKAANLLLGYKNP 189 (345)
T ss_dssp EEEEESSSCEEEEEEEECE-EEEHHHHCBGGG--BCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEESSST
T ss_pred ccccccCCCcEEEEEEecc-CCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCcCHHHEEEccCCC
Confidence 9977 67899999999 999999997654 6899999999999999999999999 99999999999999887
Q ss_pred -cEEEeeccccccCCCCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHH-
Q 003158 650 -TAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVR- 727 (843)
Q Consensus 650 -~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~- 727 (843)
.+||+|||+++....................||+.|+|||++.+..++.++|||||||++|||++|+.||........
T Consensus 190 ~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~ 269 (345)
T 2v62_A 190 DQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVA 269 (345)
T ss_dssp TSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHHH
T ss_pred CcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccccHH
Confidence 999999999987643211111111122445799999999999999999999999999999999999999954221111
Q ss_pred --HHHHHhhcccchhhccCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhh
Q 003158 728 --EVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIW 786 (843)
Q Consensus 728 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~ 786 (843)
.......... ...+.... .+..+++++.+++..||+.+|.+||++.++++.|+...
T Consensus 270 ~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~ 327 (345)
T 2v62_A 270 VQTAKTNLLDEL-PQSVLKWA--PSGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPHG 327 (345)
T ss_dssp HHHHHHHHHHTT-THHHHHHS--CTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTTC
T ss_pred HHHHHHhhcccc-cHHHHhhc--cccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhccC
Confidence 1111111000 00000000 01135568999999999999999999999999998754
No 189
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=3e-39 Score=351.74 Aligned_cols=271 Identities=25% Similarity=0.415 Sum_probs=215.5
Q ss_pred HcCCCCCCcccccCCeeEEEEEe-----CCCcEEEEEEeccCChhhHHHHHHHHHHHHhccCCcccceeeeeecCC--cE
Q 003158 510 TNNFNSSTQIGQGGYGKVYKGIL-----PDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEG--EQ 582 (843)
Q Consensus 510 ~~~~~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~--~~ 582 (843)
.++|++.+.||+|+||.||+|.+ .+++.||||++........+.+.+|+++++.++||||+++++++...+ ..
T Consensus 40 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 119 (326)
T 2w1i_A 40 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL 119 (326)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CC
T ss_pred HHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCce
Confidence 45688899999999999999984 368999999998766666778999999999999999999999986544 78
Q ss_pred EEEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccC
Q 003158 583 MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLA 662 (843)
Q Consensus 583 ~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~ 662 (843)
++||||+++++|.+++.... ..+++..++.++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||+++..
T Consensus 120 ~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dikp~NIli~~~~~~kL~Dfg~~~~~ 195 (326)
T 2w1i_A 120 KLIMEYLPYGSLRDYLQKHK-ERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRVKIGDFGLTKVL 195 (326)
T ss_dssp EEEECCCTTCBHHHHHHHST-TSSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEEEETTEEEECCCTTCEEC
T ss_pred EEEEECCCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHhCC---EeccCCCcceEEEcCCCcEEEecCcchhhc
Confidence 99999999999999997643 45889999999999999999999999 999999999999999999999999999876
Q ss_pred CCCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHH------hhcc
Q 003158 663 PVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIA------YQSS 736 (843)
Q Consensus 663 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~------~~~~ 736 (843)
...... ........++..|+|||.+.+..++.++|||||||++|||++|..|+............. ....
T Consensus 196 ~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (326)
T 2w1i_A 196 PQDKEY----YKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFH 271 (326)
T ss_dssp CSSCSE----EECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHH
T ss_pred cccccc----cccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHH
Confidence 532210 111223456778999999999889999999999999999999999886432111000000 0000
Q ss_pred cchhhccCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhh
Q 003158 737 MMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNM 788 (843)
Q Consensus 737 ~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~ 788 (843)
....+..+.....+..++.++.+++.+||+.+|.+||++.++++.|+.+.+.
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~~~ 323 (326)
T 2w1i_A 272 LIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDQ 323 (326)
T ss_dssp HHHHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHHhhcCCCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHH
Confidence 0011122223345667788999999999999999999999999999998764
No 190
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=3.6e-39 Score=351.25 Aligned_cols=257 Identities=29% Similarity=0.483 Sum_probs=210.1
Q ss_pred cCCCCCCcccccCCeeEEEEEeC-CCcE--EEEEEeccCC-hhhHHHHHHHHHHHHhc-cCCcccceeeeeecCCcEEEE
Q 003158 511 NNFNSSTQIGQGGYGKVYKGILP-DGTV--VAVKRAQEGS-LQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQMLV 585 (843)
Q Consensus 511 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~--vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~lV 585 (843)
++|++.+.||+|+||.||+|... ++.. ||+|.+.... ....+.+.+|+++++++ +||||+++++++.+.+..++|
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 104 (327)
T 1fvr_A 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA 104 (327)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEE
T ss_pred HHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEEE
Confidence 57888999999999999999964 5664 4999887532 23346789999999999 899999999999999999999
Q ss_pred EecCCCCCHHHHHhhcC--------------CCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcE
Q 003158 586 YEFMSNGTLRDQLSAKS--------------KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTA 651 (843)
Q Consensus 586 ~e~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~ 651 (843)
|||+++|+|.+++.... ...+++..++.++.||++||+|||+++ |+||||||+||+++.++.+
T Consensus 105 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIl~~~~~~~ 181 (327)
T 1fvr_A 105 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ---FIHRDLAARNILVGENYVA 181 (327)
T ss_dssp ECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECGGGCE
T ss_pred EecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCccceEEEcCCCeE
Confidence 99999999999997643 246899999999999999999999999 9999999999999999999
Q ss_pred EEeeccccccCCCCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHh-CCCCCCCCcchHHHHH
Q 003158 652 KVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVN 730 (843)
Q Consensus 652 kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~ellt-g~~pf~~~~~~~~~~~ 730 (843)
||+|||+++.... ........+++.|+|||++.+..++.++|||||||++|||++ |+.||...... ....
T Consensus 182 kL~Dfg~~~~~~~--------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~-~~~~ 252 (327)
T 1fvr_A 182 KIADFGLSRGQEV--------YVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA-ELYE 252 (327)
T ss_dssp EECCTTCEESSCE--------ECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHH-HHHH
T ss_pred EEcccCcCccccc--------cccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHH-HHHH
Confidence 9999999974321 111233457889999999999889999999999999999998 99999765421 1111
Q ss_pred HHhhcccchhhccCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhh
Q 003158 731 IAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNM 788 (843)
Q Consensus 731 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~ 788 (843)
.+..+.....+..+++.+.+++.+||..+|.+||++.++++.|+.+...
T Consensus 253 ---------~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 301 (327)
T 1fvr_A 253 ---------KLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEE 301 (327)
T ss_dssp ---------HGGGTCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred ---------HhhcCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence 1222223344556778899999999999999999999999999998764
No 191
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=2.5e-39 Score=356.50 Aligned_cols=294 Identities=21% Similarity=0.299 Sum_probs=209.3
Q ss_pred HcCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCC-hhhHHHHHHHHHHHHhccCCcccceeeeeecC-----CcE
Q 003158 510 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE-----GEQ 582 (843)
Q Consensus 510 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~-----~~~ 582 (843)
.++|++.+.||+|+||+||+|... +|+.||||++.... .....++.+|+++++.++||||+++++++... ...
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 89 (353)
T 2b9h_A 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEV 89 (353)
T ss_dssp CTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCE
T ss_pred ccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceE
Confidence 468899999999999999999975 68999999997533 33356788999999999999999999988654 678
Q ss_pred EEEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccC
Q 003158 583 MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLA 662 (843)
Q Consensus 583 ~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~ 662 (843)
++||||++ |+|.+++... .+++..++.++.|++.||+|||+++ |+||||||+||+++.++.+||+|||+++..
T Consensus 90 ~lv~e~~~-~~L~~~~~~~---~~~~~~~~~~~~qi~~~L~~LH~~~---ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~ 162 (353)
T 2b9h_A 90 YIIQELMQ-TDLHRVISTQ---MLSDDHIQYFIYQTLRAVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARII 162 (353)
T ss_dssp EEEECCCS-EEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEEeccC-ccHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEEcCCCcEEEEeccccccc
Confidence 99999996 6999998753 5889999999999999999999999 999999999999999999999999999876
Q ss_pred CCCCCCCcc---cceeeeeecccCCccCchhccc-CCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccc
Q 003158 663 PVPDIEGIV---PAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMM 738 (843)
Q Consensus 663 ~~~~~~~~~---~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~ 738 (843)
......... .........||+.|+|||++.+ ..++.++|||||||++|||++|+.||........ ..........
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-~~~~~~~~~~ 241 (353)
T 2b9h_A 163 DESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQ-LLLIFGIIGT 241 (353)
T ss_dssp C----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHHHHHHHCC
T ss_pred ccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHH-HHHHHHHhCC
Confidence 532211100 0011233568999999998865 7789999999999999999999999976543221 1111100000
Q ss_pred hhhccCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCCCCccCC
Q 003158 739 FSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSML 818 (843)
Q Consensus 739 ~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~sa~e~L 818 (843)
. ..+......... ...+.+.. +...+ +.... ...+...+.+.+++.+||..||++|||++|+|
T Consensus 242 ~-~~~~~~~~~~~~---~~~~~~~~-~~~~~--~~~~~----------~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell 304 (353)
T 2b9h_A 242 P-HSDNDLRCIESP---RAREYIKS-LPMYP--AAPLE----------KMFPRVNPKGIDLLQRMLVFDPAKRITAKEAL 304 (353)
T ss_dssp C-CSTTTTTTCCCH---HHHHHHHT-SCCCC--CCCHH----------HHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHH
T ss_pred C-chhccccccccc---hhhHHhhc-ccCCC--Ccchh----------hhcccCCHHHHHHHHHhcCcCcccCCCHHHHh
Confidence 0 000000000000 01111110 00000 11111 12233445556899999999999999999999
Q ss_pred CCCcccCCCC
Q 003158 819 KHPYVSSDVS 828 (843)
Q Consensus 819 ~Hp~f~~~~~ 828 (843)
+||||+....
T Consensus 305 ~hp~~~~~~~ 314 (353)
T 2b9h_A 305 EHPYLQTYHD 314 (353)
T ss_dssp TSGGGTTTCC
T ss_pred cCccccccCC
Confidence 9999987544
No 192
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=2.9e-39 Score=343.65 Aligned_cols=200 Identities=30% Similarity=0.461 Sum_probs=173.6
Q ss_pred HcCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCCh---hhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEE
Q 003158 510 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLV 585 (843)
Q Consensus 510 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV 585 (843)
.++|++.+.||+|+||+||+|... +++.||+|++..... .....+.+|+++++.++||||+++++++.+.+..++|
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 87 (279)
T 3fdn_A 8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI 87 (279)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEE
Confidence 467899999999999999999965 578999999864322 2246788999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCC
Q 003158 586 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVP 665 (843)
Q Consensus 586 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~ 665 (843)
|||+++|+|.+++.... .+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++......
T Consensus 88 ~e~~~~~~l~~~l~~~~--~~~~~~~~~~~~qi~~~l~~LH~~~---i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~ 162 (279)
T 3fdn_A 88 LEYAPLGTVYRELQKLS--KFDEQRTATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSS 162 (279)
T ss_dssp ECCCTTEEHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHTTT---CEECCCCGGGEEECTTSCEEECSCCEESCC---
T ss_pred EecCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCC---EecccCChHhEEEcCCCCEEEEeccccccCCcc
Confidence 99999999999997653 4889999999999999999999998 999999999999999999999999998654321
Q ss_pred CCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCc
Q 003158 666 DIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 723 (843)
Q Consensus 666 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~ 723 (843)
......|++.|+|||.+.+..++.++||||||+++|||++|+.||....
T Consensus 163 ---------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~ 211 (279)
T 3fdn_A 163 ---------RRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT 211 (279)
T ss_dssp --------------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSS
T ss_pred ---------cccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCc
Confidence 2234568999999999999999999999999999999999999997543
No 193
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=2.7e-39 Score=352.30 Aligned_cols=261 Identities=27% Similarity=0.447 Sum_probs=210.9
Q ss_pred HHcCCCCCCcccccCCeeEEEEEe------CCCcEEEEEEeccC-ChhhHHHHHHHHHHHHhccCCcccceeeeeecCCc
Q 003158 509 ATNNFNSSTQIGQGGYGKVYKGIL------PDGTVVAVKRAQEG-SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGE 581 (843)
Q Consensus 509 ~~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~ 581 (843)
..++|++.+.||+|+||.||+|.+ .+++.||||++... ......++.+|+.++++++||||+++++++.+.+.
T Consensus 28 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 107 (327)
T 2yfx_A 28 PRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLP 107 (327)
T ss_dssp CGGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred ChhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCC
Confidence 356899999999999999999984 24779999999754 33445688999999999999999999999999999
Q ss_pred EEEEEecCCCCCHHHHHhhcCC-----CCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcC---CCcEEE
Q 003158 582 QMLVYEFMSNGTLRDQLSAKSK-----EPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDH---KFTAKV 653 (843)
Q Consensus 582 ~~lV~e~~~~gsL~~~l~~~~~-----~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~---~~~~kl 653 (843)
.++||||+++|+|.+++..... ..+++..++.++.|+++||.|||+++ |+||||||+||+++. +..+||
T Consensus 108 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~---i~H~dlkp~NIli~~~~~~~~~kl 184 (327)
T 2yfx_A 108 RFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKI 184 (327)
T ss_dssp CEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESCSSTTCCEEE
T ss_pred cEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhCC---eecCcCCHhHEEEecCCCcceEEE
Confidence 9999999999999999986532 35889999999999999999999999 999999999999994 446999
Q ss_pred eeccccccCCCCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHh-CCCCCCCCcchHHHHHHH
Q 003158 654 ADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIA 732 (843)
Q Consensus 654 ~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~ellt-g~~pf~~~~~~~~~~~~~ 732 (843)
+|||+++....... ........|++.|+|||.+.+..++.++|||||||++|||++ |+.||...... ....
T Consensus 185 ~Dfg~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~-~~~~-- 256 (327)
T 2yfx_A 185 GDFGMARDIYRASY-----YRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ-EVLE-- 256 (327)
T ss_dssp CCCHHHHHHHC-----------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH-HHHH--
T ss_pred Cccccccccccccc-----cccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHH-HHHH--
Confidence 99999975432211 111234457889999999999999999999999999999998 99999765421 1111
Q ss_pred hhcccchhhccCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhh
Q 003158 733 YQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWN 787 (843)
Q Consensus 733 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~ 787 (843)
.+..+.....+..++..+.+++..||+.+|.+||++.++++.++.+..
T Consensus 257 -------~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~ 304 (327)
T 2yfx_A 257 -------FVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQ 304 (327)
T ss_dssp -------HHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred -------HHhcCCCCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhc
Confidence 122222334456677889999999999999999999999999998755
No 194
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=4.2e-39 Score=345.76 Aligned_cols=259 Identities=25% Similarity=0.348 Sum_probs=204.6
Q ss_pred HcCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCC---------hhhHHHHHHHHHHHHhcc-CCcccceeeeeec
Q 003158 510 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---------LQGEKEFLTEIQFLSRLH-HRNLVSLVGYCDE 578 (843)
Q Consensus 510 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---------~~~~~~~~~E~~~l~~l~-h~nIv~l~~~~~~ 578 (843)
.++|++.+.||+|+||.||+|... +++.||||++.... ....+.+.+|+++++++. ||||+++++++.+
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~ 95 (298)
T 1phk_A 16 YENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYET 95 (298)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEC
T ss_pred hhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeecc
Confidence 468999999999999999999975 68999999987542 112356789999999996 9999999999999
Q ss_pred CCcEEEEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccc
Q 003158 579 EGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGL 658 (843)
Q Consensus 579 ~~~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGl 658 (843)
.+..++||||+++++|.+++... ..+++..++.++.||+.||.|||+++ |+||||||+||+++.++.+||+|||+
T Consensus 96 ~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~dfg~ 170 (298)
T 1phk_A 96 NTFFFLVFDLMKKGELFDYLTEK--VTLSEKETRKIMRALLEVICALHKLN---IVHRDLKPENILLDDDMNIKLTDFGF 170 (298)
T ss_dssp SSEEEEEEECCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCTT
T ss_pred CCeEEEEEeccCCCcHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCcceEEEcCCCcEEEecccc
Confidence 99999999999999999999764 35889999999999999999999999 99999999999999999999999999
Q ss_pred cccCCCCCCCCcccceeeeeecccCCccCchhcc------cCCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHH
Q 003158 659 SRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFL------THKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIA 732 (843)
Q Consensus 659 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~ 732 (843)
+....... ......|++.|+|||++. ...++.++|||||||++|||++|+.||........ ..
T Consensus 171 ~~~~~~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~-~~-- 239 (298)
T 1phk_A 171 SCQLDPGE--------KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLM-LR-- 239 (298)
T ss_dssp CEECCTTC--------CBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HH--
T ss_pred hhhcCCCc--------ccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHHHH-HH--
Confidence 98654321 123456899999999985 45688899999999999999999999975432111 00
Q ss_pred hhcccchhhccCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCC
Q 003158 733 YQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPP 812 (843)
Q Consensus 733 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~ 812 (843)
.+........ .|.. +.......+++.+||..||++||
T Consensus 240 --------------------------~~~~~~~~~~---~~~~--------------~~~~~~l~~li~~~l~~dp~~Rp 276 (298)
T 1phk_A 240 --------------------------MIMSGNYQFG---SPEW--------------DDYSDTVKDLVSRFLVVQPQKRY 276 (298)
T ss_dssp --------------------------HHHHTCCCCC---TTTG--------------GGSCHHHHHHHHHHCCSSGGGSC
T ss_pred --------------------------HHhcCCcccC---cccc--------------cccCHHHHHHHHHHccCCcccCC
Confidence 0000000000 0000 00111233677888999999999
Q ss_pred CCccCCCCCcccCCC
Q 003158 813 SSSSMLKHPYVSSDV 827 (843)
Q Consensus 813 sa~e~L~Hp~f~~~~ 827 (843)
|++|+|+||||....
T Consensus 277 s~~~ll~h~~~~~~~ 291 (298)
T 1phk_A 277 TAEEALAHPFFQQYV 291 (298)
T ss_dssp CHHHHTTSGGGCTTC
T ss_pred CHHHHHhChHhhhcc
Confidence 999999999998654
No 195
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=7.2e-40 Score=360.04 Aligned_cols=275 Identities=21% Similarity=0.303 Sum_probs=210.9
Q ss_pred HcCCCCCCcccccCCeeEEEEEeCCCcEEEEEEeccCChhh-----------------HHHHHHHHHHHHhccCCcccce
Q 003158 510 TNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQG-----------------EKEFLTEIQFLSRLHHRNLVSL 572 (843)
Q Consensus 510 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~-----------------~~~~~~E~~~l~~l~h~nIv~l 572 (843)
.++|++.+.||+|+||.||+|.. +++.||||++....... .+.+.+|+++++.++||||+++
T Consensus 30 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~ 108 (348)
T 2pml_X 30 INDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTC 108 (348)
T ss_dssp ETTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCC
T ss_pred cCceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceE
Confidence 36899999999999999999999 89999999987432211 1789999999999999999999
Q ss_pred eeeeecCCcEEEEEecCCCCCHHHH------HhhcCCCCcchhHHHHHHHHHHHHHHHHhc-CCCCCEEeccCCCCcEEE
Q 003158 573 VGYCDEEGEQMLVYEFMSNGTLRDQ------LSAKSKEPLGFAMRLSIALGSSRGILYLHT-EADPPVFHRDIKASNILL 645 (843)
Q Consensus 573 ~~~~~~~~~~~lV~e~~~~gsL~~~------l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~-~~~~~iiH~Dlkp~NILl 645 (843)
++++.+.+..++||||+++|+|.++ +.......+++..++.++.|+++||.|||+ .+ |+||||||+||++
T Consensus 109 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~---i~H~dl~p~Nil~ 185 (348)
T 2pml_X 109 EGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKN---ICHRDVKPSNILM 185 (348)
T ss_dssp SEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTSC---EECCCCCGGGEEE
T ss_pred EEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccCC---EeecCCChHhEEE
Confidence 9999999999999999999999998 655445679999999999999999999999 88 9999999999999
Q ss_pred cCCCcEEEeeccccccCCCCCCCCcccceeeeeecccCCccCchhcccC-CCCc-hhhhHHHHHHHHHHHhCCCCCCCCc
Q 003158 646 DHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTH-KLTD-KSDVYSLGVVFLELLTGMQPISHGK 723 (843)
Q Consensus 646 ~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~-~sDvwS~G~~l~elltg~~pf~~~~ 723 (843)
+.++.+||+|||.+...... ......|++.|+|||.+.+. .++. ++|||||||++|||++|+.||....
T Consensus 186 ~~~~~~kl~dfg~~~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~ 256 (348)
T 2pml_X 186 DKNGRVKLSDFGESEYMVDK---------KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKI 256 (348)
T ss_dssp CTTSCEEECCCTTCEECBTT---------EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred cCCCcEEEeccccccccccc---------cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 99999999999999865321 23445689999999999887 6666 9999999999999999999998655
Q ss_pred chHHHHHHHhhcccchhhccCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCC
Q 003158 724 NIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSE 803 (843)
Q Consensus 724 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~ 803 (843)
........... +. ...+..... .. .+...... ....+..+....+++.+|
T Consensus 257 ~~~~~~~~i~~---------~~-~~~~~~~~~--------~~--~~~~~~~~----------~~~~~~~~~~l~~li~~~ 306 (348)
T 2pml_X 257 SLVELFNNIRT---------KN-IEYPLDRNH--------FL--YPLTNKKS----------TCSNNFLSNEDIDFLKLF 306 (348)
T ss_dssp CSHHHHHHHTS---------CC-CCCCCSSSS--------ST--TTTCC------------------CCCHHHHHHHHHH
T ss_pred cHHHHHHHHhc---------cC-cCCccchhh--------hh--cccccccc----------ccchhhcCHHHHHHHHHH
Confidence 42222221111 00 001100000 00 00000000 000112233345789999
Q ss_pred CCCCCCCCCCCccCCCCCcccCCC
Q 003158 804 HTSKEETPPSSSSMLKHPYVSSDV 827 (843)
Q Consensus 804 L~~dp~~R~sa~e~L~Hp~f~~~~ 827 (843)
|..||++|||++|+++||||.+..
T Consensus 307 L~~dP~~Rps~~e~l~hp~f~~~~ 330 (348)
T 2pml_X 307 LRKNPAERITSEDALKHEWLADTN 330 (348)
T ss_dssp CCSSGGGSCCHHHHHTSGGGTTCC
T ss_pred ccCChhhCCCHHHHhcCccccCCC
Confidence 999999999999999999998754
No 196
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=2.2e-39 Score=348.62 Aligned_cols=259 Identities=24% Similarity=0.398 Sum_probs=200.7
Q ss_pred HcCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCChhhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEEec
Q 003158 510 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 588 (843)
Q Consensus 510 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e~ 588 (843)
.++|++.+.||+|+||.||+|... +++.||+|++........+++.+|+++++.++||||+++++++.+.+..++||||
T Consensus 18 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 97 (302)
T 2j7t_A 18 NEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEF 97 (302)
T ss_dssp GGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEEC
T ss_pred ccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEEe
Confidence 468999999999999999999975 5899999999876656677899999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCCC
Q 003158 589 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 668 (843)
Q Consensus 589 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 668 (843)
+++++|.+++.... ..+++..++.++.|+++||.|||+.+ |+||||||+||+++.++.+||+|||++......
T Consensus 98 ~~~~~l~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~--- 170 (302)
T 2j7t_A 98 CPGGAVDAIMLELD-RGLTEPQIQVVCRQMLEALNFLHSKR---IIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKT--- 170 (302)
T ss_dssp CTTEEHHHHHHHHT-SCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEECTTSCEEECCCHHHHHHHHH---
T ss_pred CCCCcHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHhcCC---cccCCCCHHHEEECCCCCEEEEECCCCcccccc---
Confidence 99999999986533 35889999999999999999999999 999999999999999999999999987532110
Q ss_pred CcccceeeeeecccCCccCchhcc-----cCCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhcc
Q 003158 669 GIVPAHVSTVVKGTPGYLDPEYFL-----THKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVID 743 (843)
Q Consensus 669 ~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 743 (843)
........||+.|+|||++. +..++.++|||||||++|||++|+.||........ ... ...
T Consensus 171 ----~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-~~~---------~~~ 236 (302)
T 2j7t_A 171 ----LQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRV-LLK---------IAK 236 (302)
T ss_dssp ----HHC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH-HHH---------HHH
T ss_pred ----ccccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHHH-HHH---------Hhc
Confidence 11123346899999999984 56789999999999999999999999975432111 100 000
Q ss_pred CCCC--CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCCCCccCCCCC
Q 003158 744 GNMG--SYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHP 821 (843)
Q Consensus 744 ~~~~--~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~sa~e~L~Hp 821 (843)
.... ..+..++ ....+++.+||..||++|||++|+++||
T Consensus 237 ~~~~~~~~~~~~~---------------------------------------~~l~~li~~~l~~dp~~Rps~~~ll~h~ 277 (302)
T 2j7t_A 237 SDPPTLLTPSKWS---------------------------------------VEFRDFLKIALDKNPETRPSAAQLLEHP 277 (302)
T ss_dssp SCCCCCSSGGGSC---------------------------------------HHHHHHHHHHSCSCTTTSCCHHHHTTST
T ss_pred cCCcccCCccccC---------------------------------------HHHHHHHHHHcccChhhCCCHHHHhcCh
Confidence 0000 0011111 1223567778888889999999999999
Q ss_pred cccCCCC
Q 003158 822 YVSSDVS 828 (843)
Q Consensus 822 ~f~~~~~ 828 (843)
||++...
T Consensus 278 ~~~~~~~ 284 (302)
T 2j7t_A 278 FVSSITS 284 (302)
T ss_dssp TTTTCCC
T ss_pred HHhhhcc
Confidence 9987554
No 197
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.2e-38 Score=348.42 Aligned_cols=265 Identities=26% Similarity=0.359 Sum_probs=205.9
Q ss_pred HHHHHHHcCCCCCCcccccCCeeEEEEEeCCCcEEEEEEeccCChhhHHHHHHHHHHHHhc--cCCcccceeeeeecC--
Q 003158 504 GEMALATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRL--HHRNLVSLVGYCDEE-- 579 (843)
Q Consensus 504 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l--~h~nIv~l~~~~~~~-- 579 (843)
.......++|++.+.||+|+||.||+|+.. ++.||||++... ....+.+|.+++... +||||+++++++...
T Consensus 30 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~ 105 (337)
T 3mdy_A 30 LVQRTIAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTT---EEASWFRETEIYQTVLMRHENILGFIAADIKGTG 105 (337)
T ss_dssp HHHTTHHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCG
T ss_pred ccccccccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEecc---ccchhhhHHHHHHHHhhcCCCeeeEEEEEccCCC
Confidence 334445679999999999999999999975 899999998642 233455566666554 899999999999776
Q ss_pred --CcEEEEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcC--------CCCCEEeccCCCCcEEEcCCC
Q 003158 580 --GEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTE--------ADPPVFHRDIKASNILLDHKF 649 (843)
Q Consensus 580 --~~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~--------~~~~iiH~Dlkp~NILl~~~~ 649 (843)
...++||||+++|+|.++++.. .+++..++.++.|++.||+|||++ + |+||||||+|||++.++
T Consensus 106 ~~~~~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~---ivH~Dikp~Nill~~~~ 179 (337)
T 3mdy_A 106 SWTQLYLITDYHENGSLYDYLKST---TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPA---IAHRDLKSKNILVKKNG 179 (337)
T ss_dssp GGCEEEEEECCCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCC---EECSCCCGGGEEECTTS
T ss_pred CCCceEEEEeccCCCcHHHHhhcc---CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCC---EEecccchHHEEECCCC
Confidence 6889999999999999999654 488999999999999999999998 6 99999999999999999
Q ss_pred cEEEeeccccccCCCCCCCCcccceeeeeecccCCccCchhcccCCCCch------hhhHHHHHHHHHHHhC--------
Q 003158 650 TAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDK------SDVYSLGVVFLELLTG-------- 715 (843)
Q Consensus 650 ~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~------sDvwS~G~~l~elltg-------- 715 (843)
.+||+|||+++......... ........||+.|+|||++.+...+.+ +|||||||++|||++|
T Consensus 180 ~~kl~Dfg~a~~~~~~~~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~ 256 (337)
T 3mdy_A 180 TCCIADLGLAVKFISDTNEV---DIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVE 256 (337)
T ss_dssp CEEECCCTTCEECC------------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCC
T ss_pred CEEEEeCCCceeeccccccc---cCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccc
Confidence 99999999997654322110 111124469999999999988766654 9999999999999999
Q ss_pred --CCCCCCCc---chHHHHHHHhhcccchhhccCCCCCCC-----HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHh
Q 003158 716 --MQPISHGK---NIVREVNIAYQSSMMFSVIDGNMGSYP-----SECVEKFIKLALKCCQDETDARPSMSEVMRELESI 785 (843)
Q Consensus 716 --~~pf~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~ 785 (843)
..||.... ........... ........+ .++++++.+++.+||+.+|.+||++.++++.|+.+
T Consensus 257 ~~~~p~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l 329 (337)
T 3mdy_A 257 EYQLPYHDLVPSDPSYEDMREIVC-------IKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKM 329 (337)
T ss_dssp CCCCTTTTTSCSSCCHHHHHHHHT-------TSCCCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHH
T ss_pred cccccHhhhcCCCCchhhhHHHHh-------hhccCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHH
Confidence 66665321 11121211111 111122222 47889999999999999999999999999999998
Q ss_pred hhh
Q 003158 786 WNM 788 (843)
Q Consensus 786 ~~~ 788 (843)
.+.
T Consensus 330 ~~~ 332 (337)
T 3mdy_A 330 SES 332 (337)
T ss_dssp HHT
T ss_pred Hhh
Confidence 764
No 198
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=7.1e-40 Score=376.63 Aligned_cols=259 Identities=24% Similarity=0.399 Sum_probs=207.1
Q ss_pred HHcCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCC---hhhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEE
Q 003158 509 ATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQML 584 (843)
Q Consensus 509 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~l 584 (843)
..++|++.+.||+|+||+||+|... +++.||||++.... ....+.+.+|++++++++||||+++++++.+.+..++
T Consensus 24 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l 103 (484)
T 3nyv_A 24 FSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYL 103 (484)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred ccCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence 3568999999999999999999975 79999999986532 2346789999999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEE---cCCCcEEEeecccccc
Q 003158 585 VYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILL---DHKFTAKVADFGLSRL 661 (843)
Q Consensus 585 V~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl---~~~~~~kl~DfGla~~ 661 (843)
||||+.+|+|.+++... ..+++..++.++.||+.||.|||+++ |+||||||+|||+ +.++.+||+|||+++.
T Consensus 104 v~e~~~~~~L~~~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~ 178 (484)
T 3nyv_A 104 VGEVYTGGELFDEIISR--KRFSEVDAARIIRQVLSGITYMHKNK---IVHRDLKPENLLLESKSKDANIRIIDFGLSTH 178 (484)
T ss_dssp EECCCCSCBHHHHHHTC--SCCBHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESSSSTTCCEEECCTTHHHH
T ss_pred EEecCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHHHEEEecCCCCCcEEEEeeeeeEE
Confidence 99999999999998654 35899999999999999999999999 9999999999999 5678999999999986
Q ss_pred CCCCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhh
Q 003158 662 APVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSV 741 (843)
Q Consensus 662 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~ 741 (843)
..... ......||+.|+|||++.+ .++.++||||+||++|||++|+.||...... +.... +
T Consensus 179 ~~~~~--------~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~-~~~~~---------i 239 (484)
T 3nyv_A 179 FEASK--------KMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEY-DILKK---------V 239 (484)
T ss_dssp BCCCC--------SHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHH---------H
T ss_pred ccccc--------ccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCHH-HHHHH---------H
Confidence 54321 2234569999999999876 6899999999999999999999999754421 11110 0
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCCCCccCCCCC
Q 003158 742 IDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHP 821 (843)
Q Consensus 742 ~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~sa~e~L~Hp 821 (843)
..+... + ..|. +...++.+.+|+.+||+.||++|||++|+|+||
T Consensus 240 ~~~~~~-~---------------------~~~~--------------~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h~ 283 (484)
T 3nyv_A 240 EKGKYT-F---------------------ELPQ--------------WKKVSESAKDLIRKMLTYVPSMRISARDALDHE 283 (484)
T ss_dssp HHCCCC-C---------------------CSGG--------------GGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTSH
T ss_pred HcCCCC-C---------------------CCcc--------------cccCCHHHHHHHHHHCCCChhHCcCHHHHhhCh
Confidence 000000 0 0000 011122334788889999999999999999999
Q ss_pred cccCCC
Q 003158 822 YVSSDV 827 (843)
Q Consensus 822 ~f~~~~ 827 (843)
||+...
T Consensus 284 ~~~~~~ 289 (484)
T 3nyv_A 284 WIQTYT 289 (484)
T ss_dssp HHHHHT
T ss_pred hhcccc
Confidence 997643
No 199
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=1.3e-39 Score=374.37 Aligned_cols=260 Identities=25% Similarity=0.370 Sum_probs=205.2
Q ss_pred HHcCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCC--hhhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEE
Q 003158 509 ATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLV 585 (843)
Q Consensus 509 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV 585 (843)
..++|++.+.||+|+||+||+|... +++.||||++.... ......+.+|++++++++||||+++++++.+.+..++|
T Consensus 20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 99 (486)
T 3mwu_A 20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIV 99 (486)
T ss_dssp HHHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEE
Confidence 3568999999999999999999975 78999999986422 22356789999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEc---CCCcEEEeeccccccC
Q 003158 586 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLD---HKFTAKVADFGLSRLA 662 (843)
Q Consensus 586 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~---~~~~~kl~DfGla~~~ 662 (843)
|||+++|+|.+++.... .+++..+..++.||+.||.|||+++ |+||||||+|||++ .++.+||+|||+++..
T Consensus 100 ~e~~~~~~L~~~~~~~~--~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~ 174 (486)
T 3mwu_A 100 GELYTGGELFDEIIKRK--RFSEHDAARIIKQVFSGITYMHKHN---IVHRDLKPENILLESKEKDCDIKIIDFGLSTCF 174 (486)
T ss_dssp ECCCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEESSSSTTCCEEECSCSCTTTB
T ss_pred EEcCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCchHHEEEecCCCCCCEEEEECCcCeEC
Confidence 99999999999987653 4889999999999999999999999 99999999999995 4567999999999865
Q ss_pred CCCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhc
Q 003158 663 PVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVI 742 (843)
Q Consensus 663 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 742 (843)
... .......||+.|+|||++.+ .++.++||||+||++|+|++|+.||...... +.... +.
T Consensus 175 ~~~--------~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~-~~~~~---------i~ 235 (486)
T 3mwu_A 175 QQN--------TKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEY-DILKR---------VE 235 (486)
T ss_dssp CCC------------CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHH---------HH
T ss_pred CCC--------CccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHH---------HH
Confidence 432 12234569999999999876 5899999999999999999999999754321 11110 00
Q ss_pred cCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCCCCccCCCCCc
Q 003158 743 DGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPY 822 (843)
Q Consensus 743 ~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~sa~e~L~Hp~ 822 (843)
.+.. +...|.. ...++.+.+|+.+||+.||++|||++|+|+|||
T Consensus 236 ~~~~----------------------~~~~~~~--------------~~~s~~~~~li~~~L~~dp~~R~t~~~~l~hp~ 279 (486)
T 3mwu_A 236 TGKY----------------------AFDLPQW--------------RTISDDAKDLIRKMLTFHPSLRITATQCLEHPW 279 (486)
T ss_dssp HTCC----------------------CSCSGGG--------------GGSCHHHHHHHHHHTCSSTTTSCCHHHHHHCHH
T ss_pred hCCC----------------------CCCCccc--------------CCCCHHHHHHHHHHcCCChhhCcCHHHHhcCHh
Confidence 0000 0000100 111223347888899999999999999999999
Q ss_pred ccCCCC
Q 003158 823 VSSDVS 828 (843)
Q Consensus 823 f~~~~~ 828 (843)
|+....
T Consensus 280 ~~~~~~ 285 (486)
T 3mwu_A 280 IQKYSS 285 (486)
T ss_dssp HHHTCC
T ss_pred hccCcc
Confidence 976544
No 200
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=4.7e-39 Score=344.86 Aligned_cols=270 Identities=19% Similarity=0.284 Sum_probs=207.8
Q ss_pred HHcCCCCCCcccccCCeeEEEEEe-CCCcEEEEEEeccCChhhHHHHHHHHHHHHhccCCcccceeeee-ecCCcEEEEE
Q 003158 509 ATNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYC-DEEGEQMLVY 586 (843)
Q Consensus 509 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~-~~~~~~~lV~ 586 (843)
..++|++.+.||+|+||+||+|.. .+++.||||++..... .+++.+|+++++.++|++++..++++ .+.+..++||
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~ 84 (296)
T 4hgt_A 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVM 84 (296)
T ss_dssp ----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC-----CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEE
T ss_pred cCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeeccccc--chHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEE
Confidence 457899999999999999999996 5789999998764322 23578899999999988877777766 5667889999
Q ss_pred ecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEE---cCCCcEEEeeccccccCC
Q 003158 587 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILL---DHKFTAKVADFGLSRLAP 663 (843)
Q Consensus 587 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl---~~~~~~kl~DfGla~~~~ 663 (843)
||+ +++|.+++.... ..+++..++.++.|++.||+|||+++ |+||||||+||++ ++++.+||+|||+++...
T Consensus 85 e~~-~~~L~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~LH~~~---ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~ 159 (296)
T 4hgt_A 85 ELL-GPSLEDLFNFCS-RKFSLKTVLLLADQMISRIEYIHSKN---FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYR 159 (296)
T ss_dssp ECC-CCBHHHHHHHTT-SCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECCGGGTTCEEECCCTTCEECB
T ss_pred Ecc-CCCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeeeeccCCCCeEEEecCccceecc
Confidence 999 999999997533 35899999999999999999999999 9999999999999 789999999999998765
Q ss_pred CCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCcch--HHHHHHHhhcccchhh
Q 003158 664 VPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNI--VREVNIAYQSSMMFSV 741 (843)
Q Consensus 664 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~--~~~~~~~~~~~~~~~~ 741 (843)
........+........||+.|+|||.+.+..++.++|||||||++|||++|+.||...... .......... .
T Consensus 160 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~-----~ 234 (296)
T 4hgt_A 160 DARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEK-----K 234 (296)
T ss_dssp CTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHH-----H
T ss_pred CcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcc-----c
Confidence 44322211122334567999999999999999999999999999999999999999753221 0001000000 0
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCC
Q 003158 742 IDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMP 790 (843)
Q Consensus 742 ~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~ 790 (843)
...........+++.+.+++..||+.+|.+||++.++++.|+++.....
T Consensus 235 ~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~~~~ 283 (296)
T 4hgt_A 235 MSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQG 283 (296)
T ss_dssp HHSCHHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHHT
T ss_pred ccchhhhhhccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhC
Confidence 0000000112335789999999999999999999999999999877544
No 201
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=3.8e-39 Score=353.78 Aligned_cols=272 Identities=23% Similarity=0.314 Sum_probs=204.8
Q ss_pred HHHHHHcCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCC-----hhhHHHHHHHHHHHHhccCCcccceeeeeec
Q 003158 505 EMALATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS-----LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDE 578 (843)
Q Consensus 505 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~ 578 (843)
++....++|++.+.||+|+||+||+|... +++.||+|++.... ....+.+.+|+++++.++||||+++++++.+
T Consensus 20 ~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~ 99 (345)
T 3hko_A 20 SLLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYED 99 (345)
T ss_dssp CHHHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred hhhhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhcc
Confidence 45567889999999999999999999964 68999999986432 2335688999999999999999999999999
Q ss_pred CCcEEEEEecCCCCCHHHHHhhc--------------------------------------CCCCcchhHHHHHHHHHHH
Q 003158 579 EGEQMLVYEFMSNGTLRDQLSAK--------------------------------------SKEPLGFAMRLSIALGSSR 620 (843)
Q Consensus 579 ~~~~~lV~e~~~~gsL~~~l~~~--------------------------------------~~~~l~~~~~~~i~~~ia~ 620 (843)
.+..++||||+++|+|.+++... ....+++..++.++.||++
T Consensus 100 ~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~ 179 (345)
T 3hko_A 100 EQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFS 179 (345)
T ss_dssp SSEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHH
T ss_pred CCeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHH
Confidence 99999999999999999998521 0123467788899999999
Q ss_pred HHHHHhcCCCCCEEeccCCCCcEEEcCCC--cEEEeeccccccCCCCCCCCcccceeeeeecccCCccCchhccc--CCC
Q 003158 621 GILYLHTEADPPVFHRDIKASNILLDHKF--TAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT--HKL 696 (843)
Q Consensus 621 aL~yLH~~~~~~iiH~Dlkp~NILl~~~~--~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~ 696 (843)
||+|||+++ |+||||||+||+++.++ .+||+|||+++........ .........||+.|+|||++.+ ..+
T Consensus 180 ~l~~LH~~~---ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~---~~~~~~~~~gt~~y~aPE~~~~~~~~~ 253 (345)
T 3hko_A 180 ALHYLHNQG---ICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNG---EYYGMTTKAGTPYFVAPEVLNTTNESY 253 (345)
T ss_dssp HHHHHHHTT---EECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC-----------CCCGGGCCHHHHTCSSSCC
T ss_pred HHHHHHHCC---ccccCCChhhEEEecCCCceEEEeeccccccccccCcc---ccccccccCCCccccCchhhccCCCCC
Confidence 999999999 99999999999998776 8999999999865322111 0112345569999999999975 678
Q ss_pred CchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhccCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHH
Q 003158 697 TDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMS 776 (843)
Q Consensus 697 ~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~ 776 (843)
+.++|||||||++|||++|+.||........ .... ...... ...|..
T Consensus 254 ~~~~DiwslG~il~el~~g~~pf~~~~~~~~-~~~~---------~~~~~~----------------------~~~~~~- 300 (345)
T 3hko_A 254 GPKCDAWSAGVLLHLLLMGAVPFPGVNDADT-ISQV---------LNKKLC----------------------FENPNY- 300 (345)
T ss_dssp CTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHHH---------HHCCCC----------------------TTSGGG-
T ss_pred CcHHHHHHHHHHHHHHHHCCCCCCCCChHHH-HHHH---------Hhcccc----------------------cCCccc-
Confidence 9999999999999999999999976543211 1110 000000 000100
Q ss_pred HHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCCCCccCCCCCcccCCCC
Q 003158 777 EVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSSDVS 828 (843)
Q Consensus 777 ~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~sa~e~L~Hp~f~~~~~ 828 (843)
....+.+.+++.+||..||++|||++|+|+||||++-..
T Consensus 301 -------------~~~~~~~~~li~~~l~~~p~~Rps~~~~l~hp~~~~~~~ 339 (345)
T 3hko_A 301 -------------NVLSPLARDLLSNLLNRNVDERFDAMRALQHPWISQFSD 339 (345)
T ss_dssp -------------GGSCHHHHHHHHHHSCSCTTTSCCHHHHHHSHHHHTTSS
T ss_pred -------------ccCCHHHHHHHHHHcCCChhHCCCHHHHhcChhhccChH
Confidence 001122335777788888888888889999999977543
No 202
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=4.3e-39 Score=379.75 Aligned_cols=251 Identities=27% Similarity=0.406 Sum_probs=205.1
Q ss_pred CcccccCCeeEEEEEeC---CCcEEEEEEeccCCh--hhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEEecCCC
Q 003158 517 TQIGQGGYGKVYKGILP---DGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSN 591 (843)
Q Consensus 517 ~~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e~~~~ 591 (843)
+.||+|+||+||+|.+. .++.||||+++.... ...+++.+|++++++++||||+++++++.. +..++||||+++
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~~~ 453 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL 453 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEccCC
Confidence 47999999999999753 468899999975432 335789999999999999999999999964 568999999999
Q ss_pred CCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCCCCcc
Q 003158 592 GTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIV 671 (843)
Q Consensus 592 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~ 671 (843)
|+|.+++... ..+++..++.++.||+.||+|||+++ ||||||||+|||++.++.+||+|||+|+........
T Consensus 454 g~L~~~l~~~--~~l~~~~~~~i~~qi~~~L~yLH~~~---iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~--- 525 (635)
T 4fl3_A 454 GPLNKYLQQN--RHVKDKNIIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY--- 525 (635)
T ss_dssp EEHHHHHHHC--TTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECCTTHHHHTTC-------
T ss_pred CCHHHHHhhC--CCCCHHHHHHHHHHHHHHHHHHHHCC---EeCCCCChHhEEEeCCCCEEEEEcCCccccccCccc---
Confidence 9999999754 35889999999999999999999999 999999999999999999999999999876432211
Q ss_pred cceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHh-CCCCCCCCcchHHHHHHHhhcccchhhccCCCCCCC
Q 003158 672 PAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYP 750 (843)
Q Consensus 672 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 750 (843)
........+|+.|+|||++.+..++.++|||||||++|||++ |+.||....... +. ..+..+.....|
T Consensus 526 -~~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~--~~--------~~i~~~~~~~~p 594 (635)
T 4fl3_A 526 -YKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE--VT--------AMLEKGERMGCP 594 (635)
T ss_dssp ----------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH--HH--------HHHHTTCCCCCC
T ss_pred -cccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHH--HH--------HHHHcCCCCCCC
Confidence 112233456789999999999999999999999999999998 999997654321 11 122223344556
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhh
Q 003158 751 SECVEKFIKLALKCCQDETDARPSMSEVMRELESIWN 787 (843)
Q Consensus 751 ~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~ 787 (843)
..+++++.+++..||+.+|++||++.++++.|+++..
T Consensus 595 ~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~ 631 (635)
T 4fl3_A 595 AGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYY 631 (635)
T ss_dssp TTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHH
Confidence 7788999999999999999999999999999998765
No 203
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=5.8e-39 Score=350.96 Aligned_cols=269 Identities=24% Similarity=0.392 Sum_probs=201.1
Q ss_pred HcCCCCCCcccccCCeeEEEEEeCCCcEEEEEEeccCChhhHHHHHHHHHH--HHhccCCcccceeeeee-----cCCcE
Q 003158 510 TNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQF--LSRLHHRNLVSLVGYCD-----EEGEQ 582 (843)
Q Consensus 510 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~--l~~l~h~nIv~l~~~~~-----~~~~~ 582 (843)
.++|++.+.||+|+||+||+|+. +++.||||++.... ...+..|.++ +..++||||+++++++. .....
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 87 (336)
T 3g2f_A 12 LDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFAN---RQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEY 87 (336)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEE
T ss_pred hHHhheeeecccCCCeEEEEEEE-CCeEEEEEEeeccc---hhhHHHHHHHHHHHhccCcchhhheecccccccCCCceE
Confidence 46889999999999999999987 68999999997432 2334444444 55589999999998553 23367
Q ss_pred EEEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcC---------CCCCEEeccCCCCcEEEcCCCcEEE
Q 003158 583 MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTE---------ADPPVFHRDIKASNILLDHKFTAKV 653 (843)
Q Consensus 583 ~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~---------~~~~iiH~Dlkp~NILl~~~~~~kl 653 (843)
++||||+++|+|.+++.... .++..++.++.||++||+|||+. + |+||||||+|||++.++.+||
T Consensus 88 ~lv~e~~~~g~L~~~l~~~~---~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~---ivH~Dikp~Nill~~~~~~kL 161 (336)
T 3g2f_A 88 LLVMEYYPNGSLXKYLSLHT---SDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPA---ISHRDLNSRNVLVKNDGTCVI 161 (336)
T ss_dssp EEEECCCTTCBHHHHHHHCC---BCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCC---EECSSCSGGGEEECTTSCEEE
T ss_pred EEEEecCCCCcHHHHHhhcc---cchhHHHHHHHHHHHHHHHHHhhhccccccccc---eeecccccceEEEcCCCcEEE
Confidence 89999999999999996643 47888999999999999999998 7 999999999999999999999
Q ss_pred eeccccccCCCCCCCCc-ccceeeeeecccCCccCchhccc-------CCCCchhhhHHHHHHHHHHHhCCCCCCCCcch
Q 003158 654 ADFGLSRLAPVPDIEGI-VPAHVSTVVKGTPGYLDPEYFLT-------HKLTDKSDVYSLGVVFLELLTGMQPISHGKNI 725 (843)
Q Consensus 654 ~DfGla~~~~~~~~~~~-~~~~~~~~~~gt~~y~aPE~~~~-------~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~ 725 (843)
+|||+++.......... ..........||+.|+|||++.+ ..++.++|||||||++|||++|..||......
T Consensus 162 ~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~ 241 (336)
T 3g2f_A 162 SDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESV 241 (336)
T ss_dssp CCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCC
T ss_pred eeccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccch
Confidence 99999987653221110 01122234569999999999987 35667899999999999999998887643321
Q ss_pred H----------------HHHHHHhhcccchhhccCCCC---CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhh
Q 003158 726 V----------------REVNIAYQSSMMFSVIDGNMG---SYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIW 786 (843)
Q Consensus 726 ~----------------~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~ 786 (843)
. ........... ..+..+ .....+++.+.+++.+||+.+|.+||++.++++.|+.+.
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll 317 (336)
T 3g2f_A 242 PEYQMAFQTEVGNHPTFEDMQVLVSREK----QRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELM 317 (336)
T ss_dssp CCCCCTTHHHHCSSCCHHHHHHHHTTSC----CCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHH
T ss_pred hHHHHhhhcccCCCchHHHHHhhhcccc----cCCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHH
Confidence 0 00100000000 001111 113357788999999999999999999999999999998
Q ss_pred hhCCCC
Q 003158 787 NMMPES 792 (843)
Q Consensus 787 ~~~~~~ 792 (843)
..+...
T Consensus 318 ~~~~~~ 323 (336)
T 3g2f_A 318 MIWERN 323 (336)
T ss_dssp HCCCC-
T ss_pred HHHHhc
Confidence 776544
No 204
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=2.7e-39 Score=357.20 Aligned_cols=297 Identities=22% Similarity=0.272 Sum_probs=200.0
Q ss_pred HHHHHHHcCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCChhhHHHHHHHHHHHHhccCCcccceeeeeecCCc-
Q 003158 504 GEMALATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGE- 581 (843)
Q Consensus 504 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~- 581 (843)
.......++|++.+.||+|+||+||+|... +++.||||++.... .....+.+|++.++.++||||+++++++...+.
T Consensus 16 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~ 94 (360)
T 3e3p_A 16 ERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDP-RFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGER 94 (360)
T ss_dssp HHHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCT-TCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSS
T ss_pred hhchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCc-cccHHHHHHHHHHHhcCCCCcccHHHhhhccccc
Confidence 345567789999999999999999999974 68999999986532 223456778888999999999999999865433
Q ss_pred ------EEEEEecCCCCCHHHHHhh--cCCCCcchhHHHHHHHHHHHHHHHHh--cCCCCCEEeccCCCCcEEEcC-CCc
Q 003158 582 ------QMLVYEFMSNGTLRDQLSA--KSKEPLGFAMRLSIALGSSRGILYLH--TEADPPVFHRDIKASNILLDH-KFT 650 (843)
Q Consensus 582 ------~~lV~e~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~~ia~aL~yLH--~~~~~~iiH~Dlkp~NILl~~-~~~ 650 (843)
.++||||+++ +|.+.+.. .....+++..++.++.|++.||.||| +.+ |+||||||+|||++. ++.
T Consensus 95 ~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~---ivH~Dlkp~NIll~~~~~~ 170 (360)
T 3e3p_A 95 DRRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVN---VCHRDIKPHNVLVNEADGT 170 (360)
T ss_dssp CTTCEEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTTC---CBCSCCCGGGEEEETTTTE
T ss_pred cccceeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCCC---eecCcCCHHHEEEeCCCCc
Confidence 7899999975 66555443 23456888999999999999999999 888 999999999999997 899
Q ss_pred EEEeeccccccCCCCCCCCcccceeeeeecccCCccCchhcccCC-CCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHH
Q 003158 651 AKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHK-LTDKSDVYSLGVVFLELLTGMQPISHGKNIVREV 729 (843)
Q Consensus 651 ~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~ 729 (843)
+||+|||+++...... ......||+.|+|||++.+.. ++.++|||||||++|||++|+.||........ .
T Consensus 171 ~kl~Dfg~a~~~~~~~--------~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~-~ 241 (360)
T 3e3p_A 171 LKLCDFGSAKKLSPSE--------PNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQ-L 241 (360)
T ss_dssp EEECCCTTCBCCCTTS--------CCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-H
T ss_pred EEEeeCCCceecCCCC--------CcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHH-H
Confidence 9999999998764322 123456899999999997654 89999999999999999999999976543221 1
Q ss_pred HHHhhcccchhhccCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCC
Q 003158 730 NIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEE 809 (843)
Q Consensus 730 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~ 809 (843)
..... . .+..+.+....+..-. .........+.....+. ..........+.+|+.+||+.||+
T Consensus 242 ~~~~~------~----~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~li~~~L~~dP~ 304 (360)
T 3e3p_A 242 HEIVR------V----LGCPSREVLRKLNPSH-TDVDLYNSKGIPWSNVF------SDHSLKDAKEAYDLLSALLQYLPE 304 (360)
T ss_dssp HHHHH------H----HCCCCHHHHHHHCTTC-CCGGGGCCCCCCHHHHT------TTCCCTTHHHHHHHHHHHTCSSGG
T ss_pred HHHHH------H----cCCCCHHHHHhcccch-hhccccccccCCccccc------chhhccccHHHHHHHHHHhccCcc
Confidence 11100 0 0111121111110000 00000000111111110 001111223456899999999999
Q ss_pred CCCCCccCCCCCcccCCCCCCc
Q 003158 810 TPPSSSSMLKHPYVSSDVSGSN 831 (843)
Q Consensus 810 ~R~sa~e~L~Hp~f~~~~~~~~ 831 (843)
+|||++|+|+||||++......
T Consensus 305 ~Rpt~~e~l~hp~f~~~~~~~~ 326 (360)
T 3e3p_A 305 ERMKPYEALCHPYFDELHDPAT 326 (360)
T ss_dssp GSCCHHHHTTSGGGGGGGCTTC
T ss_pred ccCCHHHHhcCccccccCCccc
Confidence 9999999999999987655433
No 205
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=1.3e-38 Score=341.61 Aligned_cols=270 Identities=19% Similarity=0.279 Sum_probs=211.2
Q ss_pred HcCCCCCCcccccCCeeEEEEEe-CCCcEEEEEEeccCChhhHHHHHHHHHHHHhccCCcccceeeee-ecCCcEEEEEe
Q 003158 510 TNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYC-DEEGEQMLVYE 587 (843)
Q Consensus 510 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~-~~~~~~~lV~e 587 (843)
.++|++.+.||+|+||+||+|.. .+++.||||++..... .+++.+|+++++.++|++++..+.++ .+.+..++|||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e 85 (296)
T 3uzp_A 8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVME 85 (296)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSS--CCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc--hhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEE
Confidence 46899999999999999999996 5799999999875432 24688999999999998877776666 55677899999
Q ss_pred cCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEE---cCCCcEEEeeccccccCCC
Q 003158 588 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILL---DHKFTAKVADFGLSRLAPV 664 (843)
Q Consensus 588 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl---~~~~~~kl~DfGla~~~~~ 664 (843)
|+ +++|.+++.... ..+++..++.++.|+++||+|||+++ |+||||||+||++ ++++.+||+|||+++....
T Consensus 86 ~~-~~~L~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~ 160 (296)
T 3uzp_A 86 LL-GPSLEDLFNFCS-RKFSLKTVLLLADQMISRIEYIHSKN---FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRD 160 (296)
T ss_dssp CC-CCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECCGGGTTCEEECCCTTCEECBC
T ss_pred ec-CCCHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHeEEecCCCCCeEEEeeCCCcccccc
Confidence 99 999999997433 46899999999999999999999999 9999999999999 5889999999999987654
Q ss_pred CCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCcch--HHHHHHHhhcccchhhc
Q 003158 665 PDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNI--VREVNIAYQSSMMFSVI 742 (843)
Q Consensus 665 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~--~~~~~~~~~~~~~~~~~ 742 (843)
.......+........||+.|+|||.+.+..++.++|||||||++|||++|+.||...... ......... . ..
T Consensus 161 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~-~----~~ 235 (296)
T 3uzp_A 161 ARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISE-K----KM 235 (296)
T ss_dssp TTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHH-H----HH
T ss_pred cccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcc-c----cc
Confidence 3322111112234567999999999999999999999999999999999999999753211 000000000 0 00
Q ss_pred cCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCC
Q 003158 743 DGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPE 791 (843)
Q Consensus 743 ~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~ 791 (843)
.......+..+++++.+++..||+.+|.+||++.++++.|+.+......
T Consensus 236 ~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~~ 284 (296)
T 3uzp_A 236 STPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGF 284 (296)
T ss_dssp HSCHHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHTTC
T ss_pred CCchHHHHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHHhcCC
Confidence 0000001133457899999999999999999999999999998776543
No 206
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=9.4e-39 Score=356.18 Aligned_cols=250 Identities=23% Similarity=0.337 Sum_probs=199.8
Q ss_pred cCCCCCCcccccCCeeEEEEEeCCCcEEEEEEeccCC--hhhHHHHHHHHHHHHhcc--CCcccceeeeeecCCcEEEEE
Q 003158 511 NNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLH--HRNLVSLVGYCDEEGEQMLVY 586 (843)
Q Consensus 511 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~--h~nIv~l~~~~~~~~~~~lV~ 586 (843)
.+|++.+.||+|+||+||+|...+++.||||++.... ....+.+.+|+++++.++ ||||+++++++..++..++||
T Consensus 56 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~ 135 (390)
T 2zmd_A 56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM 135 (390)
T ss_dssp EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred CceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEE
Confidence 4689999999999999999998889999999987543 334578899999999996 599999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCC
Q 003158 587 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 666 (843)
Q Consensus 587 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~ 666 (843)
| +.+++|.+++.... .+++..++.++.||++||.|||+++ |+||||||+|||++ ++.+||+|||+++......
T Consensus 136 E-~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~lH~~~---ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~~ 208 (390)
T 2zmd_A 136 E-CGNIDLNSWLKKKK--SIDPWERKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDT 208 (390)
T ss_dssp E-CCSEEHHHHHHHCS--SCCHHHHHHHHHHHHHHHHHHHTTT---CCCCCCCGGGEEES-SSCEEECCCSSSCCC----
T ss_pred e-cCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCHHHEEEE-CCeEEEEecCccccccCCC
Confidence 9 55889999997654 5788889999999999999999999 99999999999996 5899999999998764321
Q ss_pred CCCcccceeeeeecccCCccCchhccc-----------CCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhc
Q 003158 667 IEGIVPAHVSTVVKGTPGYLDPEYFLT-----------HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQS 735 (843)
Q Consensus 667 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-----------~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~ 735 (843)
. ........||+.|+|||++.+ ..++.++|||||||++|||++|+.||....+.......
T Consensus 209 ~-----~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~~---- 279 (390)
T 2zmd_A 209 T-----SVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHA---- 279 (390)
T ss_dssp ----------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHH----
T ss_pred c-----cccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHHHHHHH----
Confidence 1 112234569999999999975 36889999999999999999999999765443322222
Q ss_pred ccchhhccCCC-CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 003158 736 SMMFSVIDGNM-GSYPSECVEKFIKLALKCCQDETDARPSMSEVMRE 781 (843)
Q Consensus 736 ~~~~~~~~~~~-~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~ 781 (843)
++++.. ..++...+..+.+++..||+.+|.+||++.++++.
T Consensus 280 -----~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~h 321 (390)
T 2zmd_A 280 -----IIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH 321 (390)
T ss_dssp -----HHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred -----HhCccccCCCCccchHHHHHHHHHHcccChhhCCCHHHHhhC
Confidence 222211 22344445678889999999999999999998764
No 207
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=6.3e-39 Score=351.93 Aligned_cols=198 Identities=30% Similarity=0.504 Sum_probs=172.8
Q ss_pred HcCCCCCCcccccCCeeEEEEEe-CCCcEEEEEEeccCCh---hhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEE
Q 003158 510 TNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLV 585 (843)
Q Consensus 510 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV 585 (843)
.+.|+..+.||+|+||+||+|.. .+++.||||++..... ...+++.+|+++++.++||||+++++++.+++..++|
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 132 (348)
T 1u5q_A 53 EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLV 132 (348)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred hhheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEE
Confidence 34588899999999999999996 5799999999875432 2246789999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCC
Q 003158 586 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVP 665 (843)
Q Consensus 586 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~ 665 (843)
|||+. |+|.+++.... .++++..+..++.|+++||+|||+++ |+||||||+|||++.++.+||+|||+++....
T Consensus 133 ~e~~~-g~l~~~l~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~- 206 (348)
T 1u5q_A 133 MEYCL-GSASDLLEVHK-KPLQEVEIAAVTHGALQGLAYLHSHN---MIHRDVKAGNILLSEPGLVKLGDFGSASIMAP- 206 (348)
T ss_dssp EECCS-EEHHHHHHHHT-SCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCSGGGEEEETTTEEEECCCTTCBSSSS-
T ss_pred EecCC-CCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEECCCCCEEEeeccCceecCC-
Confidence 99996 68888886533 46899999999999999999999999 99999999999999999999999999986532
Q ss_pred CCCCcccceeeeeecccCCccCchhcc---cCCCCchhhhHHHHHHHHHHHhCCCCCCCCc
Q 003158 666 DIEGIVPAHVSTVVKGTPGYLDPEYFL---THKLTDKSDVYSLGVVFLELLTGMQPISHGK 723 (843)
Q Consensus 666 ~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDvwS~G~~l~elltg~~pf~~~~ 723 (843)
.....||+.|+|||++. ...++.++|||||||++|||++|+.||....
T Consensus 207 ----------~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~ 257 (348)
T 1u5q_A 207 ----------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMN 257 (348)
T ss_dssp ----------BCCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC
T ss_pred ----------CCcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 12346899999999985 5678999999999999999999999997654
No 208
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=4.6e-39 Score=359.85 Aligned_cols=268 Identities=22% Similarity=0.268 Sum_probs=213.3
Q ss_pred HcCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCCh-hhHHHHHHHHHHHHhccCCcccceeeeeecCC--cEEEE
Q 003158 510 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEG--EQMLV 585 (843)
Q Consensus 510 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~--~~~lV 585 (843)
.++|.+.+.||+|+||+||+|... +|+.||||++..... ...+.+.+|++++++++||||+++++++.+.+ ..++|
T Consensus 8 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv 87 (396)
T 4eut_A 8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLI 87 (396)
T ss_dssp SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEE
T ss_pred CCceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEE
Confidence 357889999999999999999975 589999999975432 33567889999999999999999999997654 78999
Q ss_pred EecCCCCCHHHHHhhcC-CCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEE----cCCCcEEEeeccccc
Q 003158 586 YEFMSNGTLRDQLSAKS-KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILL----DHKFTAKVADFGLSR 660 (843)
Q Consensus 586 ~e~~~~gsL~~~l~~~~-~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl----~~~~~~kl~DfGla~ 660 (843)
|||+++|+|.+++.... ...+++..++.++.||+.||+|||+.+ |+||||||+|||+ +.++.+||+|||+++
T Consensus 88 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~ 164 (396)
T 4eut_A 88 MEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENG---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAR 164 (396)
T ss_dssp ECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEEEECTTSCEEEEECCGGGCE
T ss_pred EecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHCC---EEECCcCHHHEEEeecCCCceeEEEecCCCce
Confidence 99999999999997643 234899999999999999999999999 9999999999999 788889999999998
Q ss_pred cCCCCCCCCcccceeeeeecccCCccCchhccc--------CCCCchhhhHHHHHHHHHHHhCCCCCCCCcc---hHHHH
Q 003158 661 LAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT--------HKLTDKSDVYSLGVVFLELLTGMQPISHGKN---IVREV 729 (843)
Q Consensus 661 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~sDvwS~G~~l~elltg~~pf~~~~~---~~~~~ 729 (843)
..... .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||..... .....
T Consensus 165 ~~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~ 236 (396)
T 4eut_A 165 ELEDD--------EQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVM 236 (396)
T ss_dssp ECCCG--------GGSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHH
T ss_pred EccCC--------CccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHH
Confidence 65432 11234569999999999875 5677899999999999999999999964322 12222
Q ss_pred HHHhhccc---ch---hh---------ccCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhh
Q 003158 730 NIAYQSSM---MF---SV---------IDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNM 788 (843)
Q Consensus 730 ~~~~~~~~---~~---~~---------~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~ 788 (843)
........ +. .. ..+.....+......+.+++..||+.||++||++.++++.++++.+.
T Consensus 237 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il~~ 310 (396)
T 4eut_A 237 YKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILHR 310 (396)
T ss_dssp HHHHHSCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHHTC
T ss_pred HHHhcCCCcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHhhc
Confidence 21111100 00 00 00111234578889999999999999999999999999999987653
No 209
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00 E-value=2.4e-39 Score=356.55 Aligned_cols=291 Identities=19% Similarity=0.281 Sum_probs=209.8
Q ss_pred HcCCCCCCcccccCCeeEEEEEeC-CC-cEEEEEEeccCChhhHHHHHHHHHHHHhccCCc------ccceeeeeecCCc
Q 003158 510 TNNFNSSTQIGQGGYGKVYKGILP-DG-TVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRN------LVSLVGYCDEEGE 581 (843)
Q Consensus 510 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~-~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n------Iv~l~~~~~~~~~ 581 (843)
.++|++.+.||+|+||+||+|... ++ +.||+|++... ....+.+.+|+++++.++|++ ++.+++++...+.
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~ 96 (355)
T 2eu9_A 18 QERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV-GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGH 96 (355)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTE
T ss_pred cccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc-ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCe
Confidence 468999999999999999999964 34 78999999753 344567889999999998766 8999999999999
Q ss_pred EEEEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEE----------------
Q 003158 582 QMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILL---------------- 645 (843)
Q Consensus 582 ~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl---------------- 645 (843)
.++||||+ ++++.+++......++++..++.++.||++||+|||+++ |+||||||+|||+
T Consensus 97 ~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~---ivH~Dlkp~NIll~~~~~~~~~~~~~~~~ 172 (355)
T 2eu9_A 97 MCIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQ---LTHTDLKPENILFVNSEFETLYNEHKSCE 172 (355)
T ss_dssp EEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCCGGGEEESCCCEEEEECCC-CCC
T ss_pred EEEEEecc-CCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEeccccccccccccccc
Confidence 99999999 678888887766567999999999999999999999998 9999999999999
Q ss_pred ---cCCCcEEEeeccccccCCCCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCC
Q 003158 646 ---DHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 722 (843)
Q Consensus 646 ---~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~ 722 (843)
+.++.+||+|||+++..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 173 ~~~~~~~~~kl~Dfg~~~~~~~~----------~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~ 242 (355)
T 2eu9_A 173 EKSVKNTSIRVADFGSATFDHEH----------HTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTH 242 (355)
T ss_dssp EEEESCCCEEECCCTTCEETTSC----------CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred ccccCCCcEEEeecCcccccccc----------ccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCC
Confidence 67889999999999864321 23346899999999999999999999999999999999999999865
Q ss_pred cchHHHHHHHhhcccchhhccCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHh----hhhCCC---CCCC
Q 003158 723 KNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI----WNMMPE---SDTK 795 (843)
Q Consensus 723 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~----~~~~~~---~~~~ 795 (843)
.......... .. .+..|.........- ..... ....-+........+... ...... ....
T Consensus 243 ~~~~~~~~~~-------~~----~~~~p~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (355)
T 2eu9_A 243 ENREHLVMME-------KI----LGPIPSHMIHRTRKQ-KYFYK-GGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQ 309 (355)
T ss_dssp SHHHHHHHHH-------HH----HCCCCHHHHHHCSCG-GGEET-TEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHH
T ss_pred CHHHHHHHHH-------HH----cCCCcHHHhhhccch-hhhcc-cccccccccchhccccccCCcccccccccchhHHH
Confidence 4322111100 00 112222221110000 00000 000000000000000000 000000 0113
Q ss_pred CCccccCCCCCCCCCCCCCccCCCCCcccCCCC
Q 003158 796 TPEFINSEHTSKEETPPSSSSMLKHPYVSSDVS 828 (843)
Q Consensus 796 ~~dll~~~L~~dp~~R~sa~e~L~Hp~f~~~~~ 828 (843)
+.+|+.+||..||++|||++|+|+||||.+...
T Consensus 310 l~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~~ 342 (355)
T 2eu9_A 310 LFDLMRRMLEFDPAQRITLAEALLHPFFAGLTP 342 (355)
T ss_dssp HHHHHHHHTCSSTTTSCCHHHHTTSGGGGGCCH
T ss_pred HHHHHHHHhcCChhhCcCHHHHhcChhhcCCCh
Confidence 447999999999999999999999999987543
No 210
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=2e-39 Score=352.46 Aligned_cols=200 Identities=28% Similarity=0.446 Sum_probs=168.5
Q ss_pred HHcCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCCh--------hhHHHHHHHHHHHHhccCCcccceeeeeecC
Q 003158 509 ATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL--------QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE 579 (843)
Q Consensus 509 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~ 579 (843)
..++|.+.+.||+|+||.||+|... +++.||||++..... .....+.+|+++++.++||||+++++++..+
T Consensus 8 l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~ 87 (322)
T 2ycf_A 8 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAE 87 (322)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESS
T ss_pred hhhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCC
Confidence 4568999999999999999999965 689999999875321 1124578999999999999999999998765
Q ss_pred CcEEEEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCc---EEEeec
Q 003158 580 GEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFT---AKVADF 656 (843)
Q Consensus 580 ~~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~---~kl~Df 656 (843)
+ .++||||+++++|.+++... ..+++..++.++.||++||.|||+++ |+||||||+||+++.++. +||+||
T Consensus 88 ~-~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~NIl~~~~~~~~~~kl~Df 161 (322)
T 2ycf_A 88 D-YYIVLELMEGGELFDKVVGN--KRLKEATCKLYFYQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDF 161 (322)
T ss_dssp S-EEEEEECCTTEETHHHHSTT--CCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESSSSSSCCEEECCC
T ss_pred c-eEEEEecCCCCcHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHEEEecCCCCCeEEEccC
Confidence 4 89999999999999998653 45889999999999999999999999 999999999999987664 999999
Q ss_pred cccccCCCCCCCCcccceeeeeecccCCccCchhcc---cCCCCchhhhHHHHHHHHHHHhCCCCCCCC
Q 003158 657 GLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFL---THKLTDKSDVYSLGVVFLELLTGMQPISHG 722 (843)
Q Consensus 657 Gla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDvwS~G~~l~elltg~~pf~~~ 722 (843)
|+++..... .......||+.|+|||++. ...++.++|||||||++|||++|+.||...
T Consensus 162 g~~~~~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~ 222 (322)
T 2ycf_A 162 GHSKILGET--------SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEH 222 (322)
T ss_dssp TTCEECCCC--------HHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCST
T ss_pred ccceecccc--------cccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCccc
Confidence 999865421 1123456899999999974 467889999999999999999999999754
No 211
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=1.8e-38 Score=351.21 Aligned_cols=254 Identities=17% Similarity=0.211 Sum_probs=207.0
Q ss_pred HHcCCCCCCcccccCCeeEEEEE------eCCCcEEEEEEeccCChhhHHHHHHHHHHHHhcc---CCcccceeeeeecC
Q 003158 509 ATNNFNSSTQIGQGGYGKVYKGI------LPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLH---HRNLVSLVGYCDEE 579 (843)
Q Consensus 509 ~~~~~~~~~~lg~G~~g~Vy~~~------~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---h~nIv~l~~~~~~~ 579 (843)
..++|.+.+.||+|+||+||+|. ..+++.||||++.... ..++.+|+++++.++ |+||+++++++...
T Consensus 63 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~ 139 (365)
T 3e7e_A 63 GSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPAN---PWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQ 139 (365)
T ss_dssp SSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSCC---HHHHHHHHHHHHHSCGGGGGGBCCEEEEEECS
T ss_pred CCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCC---hhHHHHHHHHHHHhhhhhhhhhhhhheeeecC
Confidence 45678899999999999999994 3468999999997543 446777888888876 99999999999999
Q ss_pred CcEEEEEecCCCCCHHHHHhhc---CCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcC---------
Q 003158 580 GEQMLVYEFMSNGTLRDQLSAK---SKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDH--------- 647 (843)
Q Consensus 580 ~~~~lV~e~~~~gsL~~~l~~~---~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~--------- 647 (843)
+..++||||+++|+|.+++... ....+++..++.++.||++||+|||+++ ||||||||+|||++.
T Consensus 140 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~---ivHrDiKp~NIll~~~~~~~~~~~ 216 (365)
T 3e7e_A 140 NGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCE---IIHGDIKPDNFILGNGFLEQDDED 216 (365)
T ss_dssp SCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCSGGGEEECGGGTCC----
T ss_pred CCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhCC---eecCCCCHHHEEecccccCccccc
Confidence 9999999999999999999752 3456999999999999999999999999 999999999999998
Q ss_pred --CCcEEEeeccccccCCCCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCcch
Q 003158 648 --KFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNI 725 (843)
Q Consensus 648 --~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~ 725 (843)
++.+||+|||+|+...... .........||+.|+|||++.+..++.++|||||||++|||+||+.||......
T Consensus 217 ~~~~~~kl~DFG~a~~~~~~~-----~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~ 291 (365)
T 3e7e_A 217 DLSAGLALIDLGQSIDMKLFP-----KGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGG 291 (365)
T ss_dssp --CTTEEECCCTTCEEGGGSC-----TTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETT
T ss_pred cccCCEEEeeCchhhhhhccC-----CCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCC
Confidence 8999999999997543211 123345567999999999999999999999999999999999999999643220
Q ss_pred HHHHHHHhhcccchhhccCCCCCCCHHHHHHHHHHHHHhcccCCCCC-CCHHHHHHHHHHhhhh
Q 003158 726 VREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDAR-PSMSEVMRELESIWNM 788 (843)
Q Consensus 726 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~R-Ps~~~vl~~L~~~~~~ 788 (843)
. ..+.......+ ..+.+.+++..|++.+|.+| |++.++.+.++++...
T Consensus 292 ---------~----~~~~~~~~~~~--~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~l~~ 340 (365)
T 3e7e_A 292 ---------E----CKPEGLFRRLP--HLDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKVFQQ 340 (365)
T ss_dssp ---------E----EEECSCCTTCS--SHHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHHHHHH
T ss_pred ---------c----eeechhccccC--cHHHHHHHHHHHcCCCCCCcchHHHHHHHHHHHHHHH
Confidence 0 01111122222 24567788999999999988 6888888888888765
No 212
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=7.7e-39 Score=345.74 Aligned_cols=259 Identities=19% Similarity=0.263 Sum_probs=203.2
Q ss_pred HcCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCChh---hHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEE
Q 003158 510 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ---GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLV 585 (843)
Q Consensus 510 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV 585 (843)
-++|++.+.||+|+||.||+|... +++.||+|++...... ..+.+.+|+++++.++||||+++++++.+++..++|
T Consensus 33 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 112 (309)
T 2h34_A 33 FGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVD 112 (309)
T ss_dssp -CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred eccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEE
Confidence 468999999999999999999965 6899999998754322 246789999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCC
Q 003158 586 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVP 665 (843)
Q Consensus 586 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~ 665 (843)
|||+++++|.+++.... ++++..++.++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||++......
T Consensus 113 ~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~ 187 (309)
T 2h34_A 113 MRLINGVDLAAMLRRQG--PLAPPRAVAIVRQIGSALDAAHAAG---ATHRDVKPENILVSADDFAYLVDFGIASATTDE 187 (309)
T ss_dssp EECCCCEEHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECSCCC-------
T ss_pred EEecCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCc---CCcCCCChHHEEEcCCCCEEEecCccCcccccc
Confidence 99999999999997653 5889999999999999999999999 999999999999999999999999999765432
Q ss_pred CCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhccCC
Q 003158 666 DIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGN 745 (843)
Q Consensus 666 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 745 (843)
. ........|++.|+|||.+.+..++.++|||||||++|||++|+.||...... .......... ..
T Consensus 188 ~------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--~~~~~~~~~~------~~ 253 (309)
T 2h34_A 188 K------LTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLS--VMGAHINQAI------PR 253 (309)
T ss_dssp ---------------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHH--HHHHHHHSCC------CC
T ss_pred c------cccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHH--HHHHHhccCC------CC
Confidence 1 11223456899999999999999999999999999999999999999765432 1111111100 00
Q ss_pred CCCCCHHHHHHHHHHHHHhcccCCCCCC-CHHHHHHHHHHhhh
Q 003158 746 MGSYPSECVEKFIKLALKCCQDETDARP-SMSEVMRELESIWN 787 (843)
Q Consensus 746 ~~~~~~~~~~~l~~l~~~c~~~~p~~RP-s~~~vl~~L~~~~~ 787 (843)
....+..++..+.+++.+||+.+|++|| ++.++++.|+....
T Consensus 254 ~~~~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~ 296 (309)
T 2h34_A 254 PSTVRPGIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAALA 296 (309)
T ss_dssp GGGTSTTCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC
T ss_pred ccccCCCCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHH
Confidence 1122445567889999999999999999 99999999988654
No 213
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=1.9e-38 Score=343.94 Aligned_cols=269 Identities=23% Similarity=0.305 Sum_probs=209.2
Q ss_pred HHcCCCCCCcccccCCeeEEEEEe-CCCcEEEEEEeccCChhhHHHHHHHHHHHHhccCCcccceeeeee----cCCcEE
Q 003158 509 ATNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCD----EEGEQM 583 (843)
Q Consensus 509 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~----~~~~~~ 583 (843)
..++|++.+.||+|+||.||+|.. .+++.||||++........+.+.+|+++++.++||||+++++++. .....+
T Consensus 27 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 106 (317)
T 2buj_A 27 DNKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAW 106 (317)
T ss_dssp TTEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEE
T ss_pred CCeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeE
Confidence 356899999999999999999996 579999999987666666778999999999999999999999986 345789
Q ss_pred EEEecCCCCCHHHHHhhc--CCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeecccccc
Q 003158 584 LVYEFMSNGTLRDQLSAK--SKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRL 661 (843)
Q Consensus 584 lV~e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~ 661 (843)
+||||+++|+|.+++... ....+++..++.++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||++..
T Consensus 107 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~dlkp~NIl~~~~~~~kl~dfg~~~~ 183 (317)
T 2buj_A 107 LLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKG---YAHRDLKPTNILLGDEGQPVLMDLGSMNQ 183 (317)
T ss_dssp EEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTSCEEECCCSSCEE
T ss_pred EEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEEcCCCCEEEEecCcchh
Confidence 999999999999999763 3456899999999999999999999999 99999999999999999999999999875
Q ss_pred CCCCCCCCc--ccceeeeeecccCCccCchhcccCC---CCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcc
Q 003158 662 APVPDIEGI--VPAHVSTVVKGTPGYLDPEYFLTHK---LTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSS 736 (843)
Q Consensus 662 ~~~~~~~~~--~~~~~~~~~~gt~~y~aPE~~~~~~---~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~ 736 (843)
......... ..........||+.|+|||.+.+.. ++.++|||||||++|||++|+.||............
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~----- 258 (317)
T 2buj_A 184 ACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVAL----- 258 (317)
T ss_dssp SCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSCHHH-----
T ss_pred cccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccchhhH-----
Confidence 431100000 0000012345799999999997654 688999999999999999999998531100000000
Q ss_pred cchhhccCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhh
Q 003158 737 MMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNM 788 (843)
Q Consensus 737 ~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~ 788 (843)
........+.+..++..+.+++.+||+.+|.+||++.++++.|+.+...
T Consensus 259 ---~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~ 307 (317)
T 2buj_A 259 ---AVQNQLSIPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQPP 307 (317)
T ss_dssp ---HHHCC--CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTCCC
T ss_pred ---HhhccCCCCccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcCCC
Confidence 0111111222345667899999999999999999999999999987543
No 214
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=2.1e-38 Score=339.68 Aligned_cols=201 Identities=26% Similarity=0.386 Sum_probs=171.1
Q ss_pred CCCCCCcccccCCeeEEEEEe-CCCcEEEEEEeccCChhhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEEecCC
Q 003158 512 NFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMS 590 (843)
Q Consensus 512 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e~~~ 590 (843)
+|.....||+|+||.||+|.. .+++.||||.+........+.+.+|+.+++.++||||+++++++.+.+..++||||++
T Consensus 23 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 102 (295)
T 2clq_A 23 ENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVP 102 (295)
T ss_dssp TTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCS
T ss_pred CCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeCC
Confidence 355566899999999999996 4689999999987655556789999999999999999999999999999999999999
Q ss_pred CCCHHHHHhhcC-CCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcC-CCcEEEeeccccccCCCCCCC
Q 003158 591 NGTLRDQLSAKS-KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDH-KFTAKVADFGLSRLAPVPDIE 668 (843)
Q Consensus 591 ~gsL~~~l~~~~-~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~-~~~~kl~DfGla~~~~~~~~~ 668 (843)
+++|.+++.... ...+++..+..++.|+++||+|||+++ |+||||||+||+++. ++.+||+|||++.......
T Consensus 103 ~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~-- 177 (295)
T 2clq_A 103 GGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQ---IVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGIN-- 177 (295)
T ss_dssp EEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEETTTCCEEECCTTTCEESCC----
T ss_pred CCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhCC---EEccCCChhhEEEECCCCCEEEeecccccccCCCC--
Confidence 999999997653 345678889999999999999999999 999999999999987 8999999999998654221
Q ss_pred CcccceeeeeecccCCccCchhcccCC--CCchhhhHHHHHHHHHHHhCCCCCCCC
Q 003158 669 GIVPAHVSTVVKGTPGYLDPEYFLTHK--LTDKSDVYSLGVVFLELLTGMQPISHG 722 (843)
Q Consensus 669 ~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~sDvwS~G~~l~elltg~~pf~~~ 722 (843)
.......|++.|+|||++.+.. ++.++|||||||++|||++|+.||...
T Consensus 178 -----~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~ 228 (295)
T 2clq_A 178 -----PCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYEL 228 (295)
T ss_dssp --------CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGG
T ss_pred -----CcccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCC
Confidence 1123456899999999997643 889999999999999999999999643
No 215
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00 E-value=1.5e-39 Score=360.98 Aligned_cols=290 Identities=17% Similarity=0.270 Sum_probs=207.5
Q ss_pred HcCCCCCCcccccCCeeEEEEEe-CCCcEEEEEEeccCChhhHHHHHHHHHHHHhcc-----------CCcccceeeeee
Q 003158 510 TNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLH-----------HRNLVSLVGYCD 577 (843)
Q Consensus 510 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----------h~nIv~l~~~~~ 577 (843)
.++|++.+.||+|+||+||+|.. .+++.||||++... ....+.+.+|++++++++ |+||+++++++.
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~ 96 (373)
T 1q8y_A 18 DARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD-KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFN 96 (373)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEE
T ss_pred CCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCC-ccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhh
Confidence 35799999999999999999996 47899999999753 334567889999999886 899999999997
Q ss_pred cCC----cEEEEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcC-CCCCEEeccCCCCcEEEc------
Q 003158 578 EEG----EQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTE-ADPPVFHRDIKASNILLD------ 646 (843)
Q Consensus 578 ~~~----~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~-~~~~iiH~Dlkp~NILl~------ 646 (843)
..+ ..++||||+ +++|.+++.......+++..++.++.||+.||+|||++ + |+||||||+|||++
T Consensus 97 ~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~~---ivH~Dikp~NIll~~~~~~~ 172 (373)
T 1q8y_A 97 HKGPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCG---IIHTDIKPENVLMEIVDSPE 172 (373)
T ss_dssp EEETTEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTC---EECSCCSGGGEEEEEEETTT
T ss_pred ccCCCCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhcCC---EEecCCChHHeEEeccCCCc
Confidence 654 789999999 89999999876666789999999999999999999998 8 99999999999994
Q ss_pred CCCcEEEeeccccccCCCCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCcch-
Q 003158 647 HKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNI- 725 (843)
Q Consensus 647 ~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~- 725 (843)
..+.+||+|||+++..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||......
T Consensus 173 ~~~~~kl~Dfg~a~~~~~~----------~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~ 242 (373)
T 1q8y_A 173 NLIQIKIADLGNACWYDEH----------YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHS 242 (373)
T ss_dssp TEEEEEECCCTTCEETTBC----------CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC-------
T ss_pred CcceEEEcccccccccCCC----------CCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccc
Confidence 4448999999999865421 23346899999999999999999999999999999999999999754321
Q ss_pred ----HHHHHHHhhcccchhhccCCCCCCCHHHHHHHHHHHHHhcccCC-------CCCCCHHHHHHHHHHhhhhCCCCCC
Q 003158 726 ----VREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDET-------DARPSMSEVMRELESIWNMMPESDT 794 (843)
Q Consensus 726 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p-------~~RPs~~~vl~~L~~~~~~~~~~~~ 794 (843)
....... ... .+..|......-. ....++.... .......+++. ......+....
T Consensus 243 ~~~~~~~~~~~------~~~----~~~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~ 308 (373)
T 1q8y_A 243 YTKDDDHIAQI------IEL----LGELPSYLLRNGK-YTRTFFNSRGLLRNISKLKFWPLEDVLT---EKYKFSKDEAK 308 (373)
T ss_dssp --CHHHHHHHH------HHH----HCSCCHHHHHHCT-THHHHBCC--CBSSCCCCCBCCHHHHHH---HTTCCCHHHHH
T ss_pred cCChHHHHHHH------HHh----cCCCCHHHHhccc-hhhhhcCCcchhcccccccccchhhhhh---hcccCCcchHH
Confidence 1111100 000 1122222211100 0000111000 00111222211 11100011122
Q ss_pred CCCccccCCCCCCCCCCCCCccCCCCCcccCCCC
Q 003158 795 KTPEFINSEHTSKEETPPSSSSMLKHPYVSSDVS 828 (843)
Q Consensus 795 ~~~dll~~~L~~dp~~R~sa~e~L~Hp~f~~~~~ 828 (843)
.+.+||.+||+.||++|||++|+|+||||.+...
T Consensus 309 ~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~~ 342 (373)
T 1q8y_A 309 EISDFLSPMLQLDPRKRADAGGLVNHPWLKDTLG 342 (373)
T ss_dssp HHHHHHGGGGCSSTTTCBCHHHHHTCGGGTTCTT
T ss_pred HHHHHHHHHhccCccccCCHHHHhhChhhhcccC
Confidence 3457999999999999999999999999987543
No 216
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=5e-39 Score=351.02 Aligned_cols=200 Identities=24% Similarity=0.374 Sum_probs=175.0
Q ss_pred HHcCCCCCCcccccCCeeEEEEEe-CCCcEEEEEEeccCChh--------hHHHHHHHHHHHHhccCCcccceeeeeecC
Q 003158 509 ATNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQ--------GEKEFLTEIQFLSRLHHRNLVSLVGYCDEE 579 (843)
Q Consensus 509 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--------~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~ 579 (843)
..++|++.+.||+|+||+||+|.. .+++.||||++...... ..+.+.+|+++++.++||||+++++++.+.
T Consensus 22 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~ 101 (335)
T 3dls_A 22 YSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQ 101 (335)
T ss_dssp HHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECS
T ss_pred cccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeC
Confidence 357899999999999999999995 47899999998764321 223577899999999999999999999999
Q ss_pred CcEEEEEecCCCC-CHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccc
Q 003158 580 GEQMLVYEFMSNG-TLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGL 658 (843)
Q Consensus 580 ~~~~lV~e~~~~g-sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGl 658 (843)
+..++||||+.+| +|.+++.... .+++..++.++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+
T Consensus 102 ~~~~lv~e~~~~g~~l~~~~~~~~--~l~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~kL~Dfg~ 176 (335)
T 3dls_A 102 GFFQLVMEKHGSGLDLFAFIDRHP--RLDEPLASYIFRQLVSAVGYLRLKD---IIHRDIKDENIVIAEDFTIKLIDFGS 176 (335)
T ss_dssp SEEEEEEECCTTSCBHHHHHHTCC--CCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTSCEEECCCTT
T ss_pred CEEEEEEEeCCCCccHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCC---eEEeccCHHHEEEcCCCcEEEeeccc
Confidence 9999999999777 9999996543 5889999999999999999999999 99999999999999999999999999
Q ss_pred cccCCCCCCCCcccceeeeeecccCCccCchhcccCCC-CchhhhHHHHHHHHHHHhCCCCCCC
Q 003158 659 SRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKL-TDKSDVYSLGVVFLELLTGMQPISH 721 (843)
Q Consensus 659 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwS~G~~l~elltg~~pf~~ 721 (843)
++...... ......||+.|+|||++.+..+ +.++|||||||++|||++|+.||..
T Consensus 177 a~~~~~~~--------~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~ 232 (335)
T 3dls_A 177 AAYLERGK--------LFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCE 232 (335)
T ss_dssp CEECCTTC--------CBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSS
T ss_pred ceECCCCC--------ceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhh
Confidence 98764322 2234569999999999998876 7899999999999999999999964
No 217
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=4.9e-39 Score=341.75 Aligned_cols=207 Identities=27% Similarity=0.431 Sum_probs=173.5
Q ss_pred HcCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCC--hhhHHHHHHHHHHHHhccCCcccceeeeee--cCCcEEE
Q 003158 510 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCD--EEGEQML 584 (843)
Q Consensus 510 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~--~~~~~~l 584 (843)
.++|++.+.||+|+||+||+|... +++.||+|++.... ....+.+.+|++++++++||||+++++++. ..+..++
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 84 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI 84 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEE
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEE
Confidence 367889999999999999999975 68999999997543 334567899999999999999999999874 4678999
Q ss_pred EEecCCCCCHHHHHhhc--CCCCcchhHHHHHHHHHHHHHHHHhcCC--CCCEEeccCCCCcEEEcCCCcEEEeeccccc
Q 003158 585 VYEFMSNGTLRDQLSAK--SKEPLGFAMRLSIALGSSRGILYLHTEA--DPPVFHRDIKASNILLDHKFTAKVADFGLSR 660 (843)
Q Consensus 585 V~e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~ia~aL~yLH~~~--~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~ 660 (843)
||||+++++|.+++... ....+++..++.++.|+++||+|||+.+ ..+|+||||||+||++++++.+||+|||+++
T Consensus 85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~~ 164 (279)
T 2w5a_A 85 VMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLAR 164 (279)
T ss_dssp EEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEECSSSCEEECCCCHHH
T ss_pred EEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEcCCCCEEEecCchhe
Confidence 99999999999999753 3345899999999999999999999876 2349999999999999999999999999998
Q ss_pred cCCCCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCc
Q 003158 661 LAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 723 (843)
Q Consensus 661 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~ 723 (843)
...... .......|++.|+|||.+.+..++.++|||||||++|||++|+.||....
T Consensus 165 ~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~ 220 (279)
T 2w5a_A 165 ILNHDT-------SFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFS 220 (279)
T ss_dssp HC---C-------HHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred eecccc-------ccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccC
Confidence 654221 11223468999999999999999999999999999999999999997654
No 218
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=2.4e-39 Score=359.18 Aligned_cols=259 Identities=10% Similarity=-0.010 Sum_probs=182.4
Q ss_pred cCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCCh---hhHHHHHHHHHHHHhc--cCCccccee-------eeee
Q 003158 511 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRL--HHRNLVSLV-------GYCD 577 (843)
Q Consensus 511 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l--~h~nIv~l~-------~~~~ 577 (843)
.+|...+.||+|+||+||+|.+. +++.||||++..... ...+.+.+|+++++.+ +||||++++ +++.
T Consensus 62 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~~ 141 (371)
T 3q60_A 62 RKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAVA 141 (371)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEEE
T ss_pred eeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehhee
Confidence 45888999999999999999965 789999999987543 2345677886555555 699988755 4443
Q ss_pred cC-----------------CcEEEEEecCCCCCHHHHHhhcCCCCcchhHH------HHHHHHHHHHHHHHhcCCCCCEE
Q 003158 578 EE-----------------GEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMR------LSIALGSSRGILYLHTEADPPVF 634 (843)
Q Consensus 578 ~~-----------------~~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~------~~i~~~ia~aL~yLH~~~~~~ii 634 (843)
.. ...++||||++ |+|.+++..... .+.+..+ ..++.||++||+|||+++ |+
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~-~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~~---iv 216 (371)
T 3q60_A 142 VQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDF-VYVFRGDEGILALHILTAQLIRLAANLQSKG---LV 216 (371)
T ss_dssp ETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHH-SCCCCHHHHHHHHHHHHHHHHHHHHHHHHTT---EE
T ss_pred cCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhcc-ccchhhhhhhhhHHHHHHHHHHHHHHHHHCC---Cc
Confidence 22 23799999998 899999976422 2455555 778899999999999999 99
Q ss_pred eccCCCCcEEEcCCCcEEEeeccccccCCCCCCCCcccceeeeeecccCCccCchhccc--CCCCchhhhHHHHHHHHHH
Q 003158 635 HRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT--HKLTDKSDVYSLGVVFLEL 712 (843)
Q Consensus 635 H~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~sDvwS~G~~l~el 712 (843)
||||||+|||++.++.+||+|||+|+.... ......+|+.|+|||++.+ ..++.++|||||||++|||
T Consensus 217 HrDikp~NIll~~~~~~kL~DFG~a~~~~~----------~~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~el 286 (371)
T 3q60_A 217 HGHFTPDNLFIMPDGRLMLGDVSALWKVGT----------RGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRV 286 (371)
T ss_dssp ETTCSGGGEEECTTSCEEECCGGGEEETTC----------EEEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHH
T ss_pred cCcCCHHHEEECCCCCEEEEecceeeecCC----------CccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHH
Confidence 999999999999999999999999986531 1224557799999999987 7799999999999999999
Q ss_pred HhCCCCCCCCcchHHHHHHHhhcccchhhccCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCCC
Q 003158 713 LTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPES 792 (843)
Q Consensus 713 ltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~ 792 (843)
++|+.||........ ........... ...++.+. ..+..
T Consensus 287 ltg~~Pf~~~~~~~~--------~~~~~~~~~~~----------------------~~~~~~~~-----------~~~~~ 325 (371)
T 3q60_A 287 WCLFLPFGLVTPGIK--------GSWKRPSLRVP----------------------GTDSLAFG-----------SCTPL 325 (371)
T ss_dssp HHSSCSTTBCCTTCT--------TCCCBCCTTSC----------------------CCCSCCCT-----------TSSCC
T ss_pred HhCCCCCCCcCcccc--------cchhhhhhhhc----------------------cccccchh-----------hccCC
Confidence 999999975432100 00000000000 00000000 00111
Q ss_pred CCCCCccccCCCCCCCCCCCCCccCCCCCcccC
Q 003158 793 DTKTPEFINSEHTSKEETPPSSSSMLKHPYVSS 825 (843)
Q Consensus 793 ~~~~~dll~~~L~~dp~~R~sa~e~L~Hp~f~~ 825 (843)
++.+.+|+.+||..||++|||++|+|+||||+.
T Consensus 326 ~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~ 358 (371)
T 3q60_A 326 PDFVKTLIGRFLNFDRRRRLLPLEAMETPEFLQ 358 (371)
T ss_dssp CHHHHHHHHHHTCSSTTTCCCHHHHTTSHHHHH
T ss_pred CHHHHHHHHHHcCCChhhCCCHHHHhcCHHHHH
Confidence 223346788888999999999999999999975
No 219
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=1.3e-38 Score=339.60 Aligned_cols=254 Identities=24% Similarity=0.395 Sum_probs=204.4
Q ss_pred HcCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCCh---hhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEE
Q 003158 510 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLV 585 (843)
Q Consensus 510 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV 585 (843)
.++|++.+.||+|+||.||+|... +++.||+|++..... ...+.+.+|+++++.++||||+++++++.+.+..++|
T Consensus 13 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 92 (284)
T 2vgo_A 13 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLM 92 (284)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEE
Confidence 357889999999999999999975 688999999864321 2246789999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCC
Q 003158 586 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVP 665 (843)
Q Consensus 586 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~ 665 (843)
|||+++|+|.+++.... .+++..++.++.|+++||.|||+.+ |+||||||+||+++.++.+||+|||++......
T Consensus 93 ~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~ 167 (284)
T 2vgo_A 93 LEFAPRGELYKELQKHG--RFDEQRSATFMEELADALHYCHERK---VIHRDIKPENLLMGYKGELKIADFGWSVHAPSL 167 (284)
T ss_dssp ECCCTTEEHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCSGGGEEECTTCCEEECCCTTCEECSSS
T ss_pred EEeCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCHHHEEEcCCCCEEEecccccccCccc
Confidence 99999999999997653 4889999999999999999999999 999999999999999999999999998754321
Q ss_pred CCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhccCC
Q 003158 666 DIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGN 745 (843)
Q Consensus 666 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 745 (843)
......|++.|+|||++.+..++.++||||||+++|||++|+.||........ ... +...
T Consensus 168 ---------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-~~~---------~~~~- 227 (284)
T 2vgo_A 168 ---------RRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTET-HRR---------IVNV- 227 (284)
T ss_dssp ---------CBCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHH-HHH---------HHTT-
T ss_pred ---------ccccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHhHH-HHH---------Hhcc-
Confidence 12335689999999999999999999999999999999999999975442111 110 0000
Q ss_pred CCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCCCCccCCCCCcccC
Q 003158 746 MGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSS 825 (843)
Q Consensus 746 ~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~sa~e~L~Hp~f~~ 825 (843)
...++... +....+++.+||..||++|||++|+++||||+.
T Consensus 228 ~~~~~~~~---------------------------------------~~~~~~li~~~l~~~p~~Rps~~~ll~h~~~~~ 268 (284)
T 2vgo_A 228 DLKFPPFL---------------------------------------SDGSKDLISKLLRYHPPQRLPLKGVMEHPWVKA 268 (284)
T ss_dssp CCCCCTTS---------------------------------------CHHHHHHHHHHSCSSGGGSCCHHHHHTCHHHHH
T ss_pred ccCCCCcC---------------------------------------CHHHHHHHHHHhhcCHhhCCCHHHHhhCHHHHh
Confidence 00111111 112235777788888888889999999999976
Q ss_pred CC
Q 003158 826 DV 827 (843)
Q Consensus 826 ~~ 827 (843)
..
T Consensus 269 ~~ 270 (284)
T 2vgo_A 269 NS 270 (284)
T ss_dssp HC
T ss_pred hc
Confidence 43
No 220
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=1.9e-38 Score=341.54 Aligned_cols=201 Identities=29% Similarity=0.441 Sum_probs=177.5
Q ss_pred HcCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCC-hhhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEEe
Q 003158 510 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 587 (843)
Q Consensus 510 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e 587 (843)
.+.|++.+.||+|+||.||+|... +++.||||++.... ....+.+.+|+.+++.++||||+++++++.+.+..++|||
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 100 (303)
T 3a7i_A 21 EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIME 100 (303)
T ss_dssp GGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred HHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEE
Confidence 356888999999999999999964 68999999997543 3345789999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCC
Q 003158 588 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 667 (843)
Q Consensus 588 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~ 667 (843)
|+++++|.+++.. .++++..++.++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||++.......
T Consensus 101 ~~~~~~L~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~- 173 (303)
T 3a7i_A 101 YLGGGSALDLLEP---GPLDETQIATILREILKGLDYLHSEK---KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ- 173 (303)
T ss_dssp CCTTEEHHHHHTT---SCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECBTTB-
T ss_pred eCCCCcHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCChheEEECCCCCEEEeecccceecCccc-
Confidence 9999999999954 35889999999999999999999999 9999999999999999999999999997654321
Q ss_pred CCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCc
Q 003158 668 EGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 723 (843)
Q Consensus 668 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~ 723 (843)
.......|++.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 174 ------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~ 223 (303)
T 3a7i_A 174 ------IKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELH 223 (303)
T ss_dssp ------CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC
T ss_pred ------cccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcC
Confidence 11234568999999999999999999999999999999999999997543
No 221
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=4.7e-38 Score=338.79 Aligned_cols=252 Identities=23% Similarity=0.340 Sum_probs=199.1
Q ss_pred HcCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCC----hhhHHHHHHHHHHHHhccCCcccceeeee--ecCCcE
Q 003158 510 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS----LQGEKEFLTEIQFLSRLHHRNLVSLVGYC--DEEGEQ 582 (843)
Q Consensus 510 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~h~nIv~l~~~~--~~~~~~ 582 (843)
.++|.+.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|+++++.++||||+++++++ .+....
T Consensus 4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (305)
T 2wtk_C 4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKM 83 (305)
T ss_dssp -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CE
T ss_pred ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeE
Confidence 468999999999999999999964 68999999987532 23356789999999999999999999998 445688
Q ss_pred EEEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccC
Q 003158 583 MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLA 662 (843)
Q Consensus 583 ~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~ 662 (843)
++||||++++ |.+++.......+++..++.++.||++||.|||+++ |+||||||+||+++.++.+||+|||++...
T Consensus 84 ~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~---i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~ 159 (305)
T 2wtk_C 84 YMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQG---IVHKDIKPGNLLLTTGGTLKISALGVAEAL 159 (305)
T ss_dssp EEEEECCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEehhccCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCcccEEEcCCCcEEeecccccccc
Confidence 9999999765 888887766667999999999999999999999999 999999999999999999999999999865
Q ss_pred CCCCCCCcccceeeeeecccCCccCchhcccCC--CCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchh
Q 003158 663 PVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHK--LTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFS 740 (843)
Q Consensus 663 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~ 740 (843)
..... ........||+.|+|||++.+.. ++.++|||||||++|||++|+.||..... .......
T Consensus 160 ~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-~~~~~~i-------- 225 (305)
T 2wtk_C 160 HPFAA-----DDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNI-YKLFENI-------- 225 (305)
T ss_dssp CTTCS-----SCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSH-HHHHHHH--------
T ss_pred Ccccc-----ccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchH-HHHHHHH--------
Confidence 43221 12233456899999999998654 37799999999999999999999976442 1111111
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 003158 741 VIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRE 781 (843)
Q Consensus 741 ~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~ 781 (843)
. ......+..+++.+.+++.+||+.+|.+||++.++++.
T Consensus 226 -~-~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 264 (305)
T 2wtk_C 226 -G-KGSYAIPGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQH 264 (305)
T ss_dssp -H-HCCCCCCSSSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred -h-cCCCCCCCccCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 1 11122344556677778888888888888888777753
No 222
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00 E-value=4.9e-39 Score=354.19 Aligned_cols=275 Identities=23% Similarity=0.375 Sum_probs=203.1
Q ss_pred cCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCC--hhhHHHHHHHHHHHHhccCCcccceeeeeecCCc------
Q 003158 511 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGE------ 581 (843)
Q Consensus 511 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~------ 581 (843)
++|.+.+.||+|+||.||+|... +|+.||||++.... ....+++.+|+.+++.++||||+++++++...+.
T Consensus 24 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 103 (353)
T 3coi_A 24 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYD 103 (353)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCC
T ss_pred ceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEeccccccccee
Confidence 57888999999999999999964 69999999997532 2335678999999999999999999999977654
Q ss_pred EEEEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeecccccc
Q 003158 582 QMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRL 661 (843)
Q Consensus 582 ~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~ 661 (843)
.++||||++ ++|.+++.. .+++..++.++.||++||+|||+++ |+||||||+||++++++.+||+|||+++.
T Consensus 104 ~~lv~e~~~-~~l~~~~~~----~~~~~~~~~i~~qi~~al~~LH~~~---ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~ 175 (353)
T 3coi_A 104 FYLVMPFMQ-TDLQKIMGL----KFSEEKIQYLVYQMLKGLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLARH 175 (353)
T ss_dssp CEEEEECCS-EEGGGTTTS----CCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCCGGGEEECTTCCEEECSTTCTTC
T ss_pred EEEEecccc-CCHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEeECCCCcEEEeecccccC
Confidence 499999996 688887732 4889999999999999999999999 99999999999999999999999999976
Q ss_pred CCCCCCCCcccceeeeeecccCCccCchhccc-CCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchh
Q 003158 662 APVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFS 740 (843)
Q Consensus 662 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~ 740 (843)
... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||...... +........
T Consensus 176 ~~~----------~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~-~~~~~i~~~----- 239 (353)
T 3coi_A 176 ADA----------EMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYL-DQLTQILKV----- 239 (353)
T ss_dssp ------------------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHH-HHHHHHHHH-----
T ss_pred CCC----------CccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHH-----
Confidence 432 1234568999999999987 67899999999999999999999999765432 222111100
Q ss_pred hccCCCCCCCHHHHHHH----HHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCCCCcc
Q 003158 741 VIDGNMGSYPSECVEKF----IKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSS 816 (843)
Q Consensus 741 ~~~~~~~~~~~~~~~~l----~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~sa~e 816 (843)
.+..+.+....+ .......+...+ |+.+. ...+...+.+.+|+.+||..||++|||++|
T Consensus 240 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~----------~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e 302 (353)
T 3coi_A 240 -----TGVPGTEFVQKLNDKAAKSYIQSLPQTP--RKDFT----------QLFPRASPQAADLLEKMLELDVDKRLTAAQ 302 (353)
T ss_dssp -----HCBCCHHHHTTCSCHHHHHHHHTSCBCS--SCCTT----------TTCTTSCHHHHHHHHHHSCSCTTTSCCHHH
T ss_pred -----hCCCCHHHHHHHhhHHHHHHHHhCcCCC--CccHH----------HhcCCcCHHHHHHHHHHcCCCcccCCCHHH
Confidence 001111111100 000001111111 11111 112233444568999999999999999999
Q ss_pred CCCCCcccCC
Q 003158 817 MLKHPYVSSD 826 (843)
Q Consensus 817 ~L~Hp~f~~~ 826 (843)
+|+||||...
T Consensus 303 ~l~hp~f~~~ 312 (353)
T 3coi_A 303 ALTHPFFEPF 312 (353)
T ss_dssp HHTSGGGTTT
T ss_pred HhcCcchhhc
Confidence 9999999754
No 223
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=2.3e-38 Score=335.98 Aligned_cols=200 Identities=28% Similarity=0.414 Sum_probs=168.1
Q ss_pred HcCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCCh---hhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEE
Q 003158 510 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLV 585 (843)
Q Consensus 510 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV 585 (843)
.++|.+.+.||+|+||.||+|... +|+.||||++..... ...+.+.+|+++++.++||||+++++++.+.+..++|
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 89 (276)
T 2h6d_A 10 IGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMV 89 (276)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred eccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEE
Confidence 367889999999999999999975 799999999875322 2346789999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCC
Q 003158 586 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVP 665 (843)
Q Consensus 586 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~ 665 (843)
|||+++++|.+++.... .+++..++.++.|+++||+|||+++ |+||||||+||+++.++.+||+|||++......
T Consensus 90 ~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~ 164 (276)
T 2h6d_A 90 MEYVSGGELFDYICKHG--RVEEMEARRLFQQILSAVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDG 164 (276)
T ss_dssp EECCCSCBHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHHC---SSCCCCCGGGEEECTTSCEEECCCCGGGCCCC-
T ss_pred EeccCCCcHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCChhhEEECCCCCEEEeecccccccCCC
Confidence 99999999999997653 4889999999999999999999999 999999999999999999999999999865432
Q ss_pred CCCCcccceeeeeecccCCccCchhcccCCC-CchhhhHHHHHHHHHHHhCCCCCCCC
Q 003158 666 DIEGIVPAHVSTVVKGTPGYLDPEYFLTHKL-TDKSDVYSLGVVFLELLTGMQPISHG 722 (843)
Q Consensus 666 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwS~G~~l~elltg~~pf~~~ 722 (843)
. ......|++.|+|||.+.+..+ +.++||||||+++|||++|+.||...
T Consensus 165 ~--------~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~ 214 (276)
T 2h6d_A 165 E--------FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDE 214 (276)
T ss_dssp --------------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred c--------ceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCC
Confidence 1 1234468999999999988765 68999999999999999999999754
No 224
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=1.4e-37 Score=340.79 Aligned_cols=267 Identities=22% Similarity=0.334 Sum_probs=212.0
Q ss_pred cHHHHHHHHcCCCCCCcccccCCeeEEEEEeCCCcEEEEEEeccCChhhHHHHHHHHHHHHh--ccCCcccceeeeeecC
Q 003158 502 TYGEMALATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSR--LHHRNLVSLVGYCDEE 579 (843)
Q Consensus 502 ~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~h~nIv~l~~~~~~~ 579 (843)
+........++|.+.+.||+|+||+||+|.. +++.||||++... ..+.+.+|++++.. ++||||+++++++...
T Consensus 33 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~ 108 (342)
T 1b6c_B 33 PLLVQRTIARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKD 108 (342)
T ss_dssp CHHHHHHHHHHCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECC
T ss_pred ceeecccccccEEEEeeecCCCCcEEEEEEE-cCccEEEEEeCch---hHHHHHHHHHHHHHhhcCCCcEEEEEeeeccc
Confidence 3334455678999999999999999999998 5899999998642 34577889998887 7899999999999876
Q ss_pred C----cEEEEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHh--------cCCCCCEEeccCCCCcEEEcC
Q 003158 580 G----EQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLH--------TEADPPVFHRDIKASNILLDH 647 (843)
Q Consensus 580 ~----~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH--------~~~~~~iiH~Dlkp~NILl~~ 647 (843)
. ..++||||+++|+|.+++... .+++..++.++.|+++||+||| +.+ |+||||||+||+++.
T Consensus 109 ~~~~~~~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~---ivH~Dlkp~NIll~~ 182 (342)
T 1b6c_B 109 NGTWTQLWLVSDYHEHGSLFDYLNRY---TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPA---IAHRDLKSKNILVKK 182 (342)
T ss_dssp CSSCCCEEEEECCCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCE---EECSCCSGGGEEECT
T ss_pred CCccceeEEEEeecCCCcHHHHHhcc---CccHHHHHHHHHHHHHHHHHHHHHHhhhcccCC---eeeCCCCHHHEEECC
Confidence 5 789999999999999999653 4889999999999999999999 777 999999999999999
Q ss_pred CCcEEEeeccccccCCCCCCCCcccceeeeeecccCCccCchhcccCC------CCchhhhHHHHHHHHHHHhC------
Q 003158 648 KFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHK------LTDKSDVYSLGVVFLELLTG------ 715 (843)
Q Consensus 648 ~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~------~~~~sDvwS~G~~l~elltg------ 715 (843)
++.+||+|||++......... .........||+.|+|||++.+.. ++.++|||||||++|||++|
T Consensus 183 ~~~~kL~Dfg~~~~~~~~~~~---~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~ 259 (342)
T 1b6c_B 183 NGTCCIADLGLAVRHDSATDT---IDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGI 259 (342)
T ss_dssp TSCEEECCCTTCEEEETTTTE---EEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTB
T ss_pred CCCEEEEECCCceeccccccc---cccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCc
Confidence 999999999999765432210 011223456999999999998753 33689999999999999999
Q ss_pred ----CCCCCCCcc---hHHHHHHHhhcccchhhccCCCCCC-----CHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 003158 716 ----MQPISHGKN---IVREVNIAYQSSMMFSVIDGNMGSY-----PSECVEKFIKLALKCCQDETDARPSMSEVMRELE 783 (843)
Q Consensus 716 ----~~pf~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~ 783 (843)
..||..... ............ ...+.. ..++++.+.+++.+||+.+|.+||++.++++.|+
T Consensus 260 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~ 332 (342)
T 1b6c_B 260 HEDYQLPYYDLVPSDPSVEEMRKVVCEQ-------KLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLS 332 (342)
T ss_dssp CCCCCCTTTTTSCSSCCHHHHHHHHTTS-------CCCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHH
T ss_pred ccccccCccccCcCcccHHHHHHHHHHH-------HhCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHH
Confidence 778865321 112121111110 111222 3477889999999999999999999999999999
Q ss_pred Hhhhh
Q 003158 784 SIWNM 788 (843)
Q Consensus 784 ~~~~~ 788 (843)
.+.+.
T Consensus 333 ~i~~~ 337 (342)
T 1b6c_B 333 QLSQQ 337 (342)
T ss_dssp HHHHT
T ss_pred HHHHH
Confidence 98764
No 225
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=3.5e-38 Score=359.20 Aligned_cols=269 Identities=20% Similarity=0.289 Sum_probs=210.5
Q ss_pred HcCCCCCCcccccCCeeEEEEEe-CCCcEEEEEEeccCChhhHHHHHHHHHHHHhccC-CcccceeeeeecCCcEEEEEe
Q 003158 510 TNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHH-RNLVSLVGYCDEEGEQMLVYE 587 (843)
Q Consensus 510 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h-~nIv~l~~~~~~~~~~~lV~e 587 (843)
.++|++.+.||+|+||.||+|.. .+++.||||++..... .+++.+|+++++.++| ++|..+..++.+.+..++|||
T Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~--~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme 83 (483)
T 3sv0_A 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK--HPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMD 83 (483)
T ss_dssp TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCS--SCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccc--cHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEE
Confidence 36899999999999999999996 5799999998875432 2357889999999987 555566666677788899999
Q ss_pred cCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEE---cCCCcEEEeeccccccCCC
Q 003158 588 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILL---DHKFTAKVADFGLSRLAPV 664 (843)
Q Consensus 588 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl---~~~~~~kl~DfGla~~~~~ 664 (843)
|+ +++|.+++... ...+++..++.|+.||+.||+|||+++ ||||||||+|||+ +.++.+||+|||+++....
T Consensus 84 ~~-g~sL~~ll~~~-~~~l~~~~~~~i~~qi~~aL~yLH~~g---IvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~ 158 (483)
T 3sv0_A 84 LL-GPSLEDLFNFC-SRKLSLKTVLMLADQMINRVEFVHSKS---FLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRD 158 (483)
T ss_dssp CC-CCBHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECCGGGTTCEEECCCTTCEECBC
T ss_pred CC-CCCHHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccCcceEEEecCCCCCeEEEEeCCcceeccC
Confidence 99 99999999753 345899999999999999999999999 9999999999999 6889999999999987654
Q ss_pred CCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCcc--hHHHHHHHhhcccchhhc
Q 003158 665 PDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKN--IVREVNIAYQSSMMFSVI 742 (843)
Q Consensus 665 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~--~~~~~~~~~~~~~~~~~~ 742 (843)
.......+........||+.|+|||++.+..++.++|||||||++|||++|+.||..... ..+....... ......+
T Consensus 159 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~-~~~~~~~ 237 (483)
T 3sv0_A 159 TSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISE-KKVATSI 237 (483)
T ss_dssp TTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHH-HHHHSCH
T ss_pred CccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhh-ccccccH
Confidence 332211112223356799999999999999999999999999999999999999976432 1111111111 0000000
Q ss_pred cCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCC
Q 003158 743 DGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMP 790 (843)
Q Consensus 743 ~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~ 790 (843)
...+..++.++.+++..||+.+|++||++.++++.|+.+.....
T Consensus 238 ----~~l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~~~~~ 281 (483)
T 3sv0_A 238 ----EALCRGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLFIREG 281 (483)
T ss_dssp ----HHHHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred ----HHHhcCCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHHcC
Confidence 00112345788999999999999999999999999999876543
No 226
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00 E-value=3.6e-39 Score=352.49 Aligned_cols=261 Identities=19% Similarity=0.291 Sum_probs=176.6
Q ss_pred HHcCCCCCC-cccccCCeeEEEEEeC-CCcEEEEEEeccCChhhHHHHHHHHHHHHhccCCcccceeeeeec----CCcE
Q 003158 509 ATNNFNSST-QIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDE----EGEQ 582 (843)
Q Consensus 509 ~~~~~~~~~-~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~----~~~~ 582 (843)
..++|.+.+ .||+|+||+||+|... +++.||||++.... . ...+....++.+.||||+++++++.. ....
T Consensus 26 ~~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-~---~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~ 101 (336)
T 3fhr_A 26 VTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSP-K---ARQEVDHHWQASGGPHIVCILDVYENMHHGKRCL 101 (336)
T ss_dssp GGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSH-H---HHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred ccceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcH-H---HHHHHHHHHHhcCCCChHHHHHHHhhccCCCceE
Confidence 356788855 6999999999999975 69999999987531 1 12222334566799999999999865 4458
Q ss_pred EEEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcC---CCcEEEeecccc
Q 003158 583 MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDH---KFTAKVADFGLS 659 (843)
Q Consensus 583 ~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~---~~~~kl~DfGla 659 (843)
++||||+++|+|.+++.......+++..++.++.|+++||.|||+++ |+||||||+||+++. ++.+||+|||++
T Consensus 102 ~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~~---ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~ 178 (336)
T 3fhr_A 102 LIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHN---IAHRDVKPENLLYTSKEKDAVLKLTDFGFA 178 (336)
T ss_dssp EEEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESCSSTTCCEEECCCTTC
T ss_pred EEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEEecCCCceEEEeccccc
Confidence 99999999999999998776667999999999999999999999999 999999999999986 455999999999
Q ss_pred ccCCCCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccch
Q 003158 660 RLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMF 739 (843)
Q Consensus 660 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~ 739 (843)
+..... ......||+.|+|||++.+..++.++|||||||++|||++|+.||........
T Consensus 179 ~~~~~~---------~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~------------ 237 (336)
T 3fhr_A 179 KETTQN---------ALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAI------------ 237 (336)
T ss_dssp EEC-------------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC--------------------
T ss_pred eecccc---------ccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhh------------
Confidence 765321 12345689999999999888899999999999999999999999964332100
Q ss_pred hhccCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCCCCccCCC
Q 003158 740 SVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLK 819 (843)
Q Consensus 740 ~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~sa~e~L~ 819 (843)
.......+.......|. | .+......+.+|+.+||..||++|||++|+|+
T Consensus 238 --------------~~~~~~~~~~~~~~~~~--~--------------~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 287 (336)
T 3fhr_A 238 --------------SPGMKRRIRLGQYGFPN--P--------------EWSEVSEDAKQLIRLLLKTDPTERLTITQFMN 287 (336)
T ss_dssp ---------------------------CCCT--T--------------TSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred --------------hhhHHHhhhccccccCc--h--------------hhccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 00000000000000000 0 00111223346788889999999999999999
Q ss_pred CCcccCCC
Q 003158 820 HPYVSSDV 827 (843)
Q Consensus 820 Hp~f~~~~ 827 (843)
||||+...
T Consensus 288 hp~~~~~~ 295 (336)
T 3fhr_A 288 HPWINQSM 295 (336)
T ss_dssp SHHHHTGG
T ss_pred Cccccccc
Confidence 99997644
No 227
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=3.3e-38 Score=344.77 Aligned_cols=266 Identities=24% Similarity=0.377 Sum_probs=195.1
Q ss_pred HHcCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCChhhHHHHHHHHHHHHhcc-CCcccceeeeee--------c
Q 003158 509 ATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLH-HRNLVSLVGYCD--------E 578 (843)
Q Consensus 509 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~nIv~l~~~~~--------~ 578 (843)
...+|++.+.||+|+||.||+|... +++.||||++........+.+.+|+.+++++. ||||+++++++. .
T Consensus 26 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~ 105 (337)
T 3ll6_A 26 GELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTG 105 (337)
T ss_dssp TTEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTS
T ss_pred cCceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccC
Confidence 3468899999999999999999964 78999999987766666778999999999996 999999999983 3
Q ss_pred CCcEEEEEecCCCCCHHHHHhh-cCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeecc
Q 003158 579 EGEQMLVYEFMSNGTLRDQLSA-KSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFG 657 (843)
Q Consensus 579 ~~~~~lV~e~~~~gsL~~~l~~-~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfG 657 (843)
....++||||+. |+|.+++.. ....++++..++.++.||+.||+|||+.+ ++|+||||||+|||++.++.+||+|||
T Consensus 106 ~~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~-~~ivH~Dikp~NIl~~~~~~~kl~Dfg 183 (337)
T 3ll6_A 106 QAEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQK-PPIIHRDLKVENLLLSNQGTIKLCDFG 183 (337)
T ss_dssp SEEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTSS-SCCBCCCCCGGGCEECTTSCEEBCCCT
T ss_pred CceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCC-CCEEEccCCcccEEECCCCCEEEecCc
Confidence 345899999995 799998865 23456999999999999999999999875 459999999999999999999999999
Q ss_pred ccccCCCCCCCCccc-----ceeeeeecccCCccCchhc---ccCCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHH
Q 003158 658 LSRLAPVPDIEGIVP-----AHVSTVVKGTPGYLDPEYF---LTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREV 729 (843)
Q Consensus 658 la~~~~~~~~~~~~~-----~~~~~~~~gt~~y~aPE~~---~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~ 729 (843)
+++............ ........||+.|+|||++ .+..++.++|||||||++|||++|+.||.......
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~--- 260 (337)
T 3ll6_A 184 SATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLR--- 260 (337)
T ss_dssp TCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC----------
T ss_pred cceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHHH---
Confidence 998765322110000 0111244589999999998 56678899999999999999999999996543211
Q ss_pred HHHhhcccchhhccCCC-CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCC
Q 003158 730 NIAYQSSMMFSVIDGNM-GSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMP 790 (843)
Q Consensus 730 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~ 790 (843)
...... ...+...+..+.+++..||+.+|.+||++.++++.|+.+.....
T Consensus 261 -----------~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~~~~ 311 (337)
T 3ll6_A 261 -----------IVNGKYSIPPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAAARN 311 (337)
T ss_dssp ----------------CCCCTTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHHTT
T ss_pred -----------hhcCcccCCcccccchHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhccC
Confidence 111111 11223344568899999999999999999999999999876543
No 228
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=2.9e-38 Score=337.88 Aligned_cols=260 Identities=24% Similarity=0.390 Sum_probs=201.3
Q ss_pred HcCCCCCCcccccCCeeEEEEEeC--CCc--EEEEEEeccCC---hhhHHHHHHHHHHHHhccCCcccceeeeeecCCcE
Q 003158 510 TNNFNSSTQIGQGGYGKVYKGILP--DGT--VVAVKRAQEGS---LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQ 582 (843)
Q Consensus 510 ~~~~~~~~~lg~G~~g~Vy~~~~~--~~~--~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~ 582 (843)
.++|++.+.||+|+||+||+|.+. +++ .||||++.... ....+++.+|+++++.++||||+++++++.+.. .
T Consensus 17 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~ 95 (291)
T 1u46_A 17 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-M 95 (291)
T ss_dssp GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-C
T ss_pred hhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-c
Confidence 457889999999999999999853 333 68999987542 234568899999999999999999999998754 8
Q ss_pred EEEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccC
Q 003158 583 MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLA 662 (843)
Q Consensus 583 ~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~ 662 (843)
++||||+++++|.+++.... ..+++..++.++.|+++||.|||+++ |+||||||+||+++.++.+||+|||++...
T Consensus 96 ~~v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dikp~Nili~~~~~~kl~Dfg~~~~~ 171 (291)
T 1u46_A 96 KMVTELAPLGSLLDRLRKHQ-GHFLLGTLSRYAVQVAEGMGYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRAL 171 (291)
T ss_dssp EEEEECCTTCBHHHHHHHHG-GGSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEEEETTEEEECCCTTCEEC
T ss_pred eeeEecccCCCHHHHHHhcc-CCcCHHHHHHHHHHHHHHHHHHHhCC---cccCCCchheEEEcCCCCEEEccccccccc
Confidence 89999999999999997642 35889999999999999999999999 999999999999999999999999999876
Q ss_pred CCCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHh-CCCCCCCCcchHHHHHHHhhcccchhh
Q 003158 663 PVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSV 741 (843)
Q Consensus 663 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~ 741 (843)
...... ........++..|+|||.+.+..++.++|||||||++|||++ |+.||...... +.......
T Consensus 172 ~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~-~~~~~~~~------- 239 (291)
T 1u46_A 172 PQNDDH----YVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGS-QILHKIDK------- 239 (291)
T ss_dssp CC-CCE----EEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHH-HHHHHHHT-------
T ss_pred cccccc----hhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHH-HHHHHHHc-------
Confidence 432210 111233457788999999999889999999999999999999 99999765432 11111110
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhh
Q 003158 742 IDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWN 787 (843)
Q Consensus 742 ~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~ 787 (843)
.......+..++..+.+++..||..+|.+||++.++++.|+++..
T Consensus 240 -~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~ 284 (291)
T 1u46_A 240 -EGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQP 284 (291)
T ss_dssp -SCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC-
T ss_pred -cCCCCCCCcCcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhCc
Confidence 111223455677889999999999999999999999999998753
No 229
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.5e-38 Score=346.15 Aligned_cols=209 Identities=30% Similarity=0.454 Sum_probs=172.7
Q ss_pred HHHHHHHcCCCCCCcccccCCeeEEEEEe-CCCcEEEEEEeccCChhhHHHHHHHHHHHHhc-cCCcccceeeeeec---
Q 003158 504 GEMALATNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDE--- 578 (843)
Q Consensus 504 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~--- 578 (843)
.++....++|++.+.||+|+||.||+|.. .+++.||||++.... ...+.+.+|+++++++ +||||+++++++..
T Consensus 17 ~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~ 95 (326)
T 2x7f_A 17 SALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNP 95 (326)
T ss_dssp CCCCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS-STTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC-
T ss_pred hhccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCc-ccHHHHHHHHHHHHhccCCCCeeeeeeEEeeccC
Confidence 33444578899999999999999999996 478999999987543 3346789999999999 79999999999976
Q ss_pred ---CCcEEEEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEee
Q 003158 579 ---EGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVAD 655 (843)
Q Consensus 579 ---~~~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~D 655 (843)
.+..++||||+++|+|.+++.......+++..++.++.||+.||.|||+.+ |+||||||+||+++.++.+||+|
T Consensus 96 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dlkp~NIl~~~~~~~kl~D 172 (326)
T 2x7f_A 96 PGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHK---VIHRDIKGQNVLLTENAEVKLVD 172 (326)
T ss_dssp -CCCCEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEECTTCCEEECC
T ss_pred ccccceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCcHHHEEEcCCCCEEEee
Confidence 467899999999999999998765556889999999999999999999999 99999999999999999999999
Q ss_pred ccccccCCCCCCCCcccceeeeeecccCCccCchhcc-----cCCCCchhhhHHHHHHHHHHHhCCCCCCCCc
Q 003158 656 FGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFL-----THKLTDKSDVYSLGVVFLELLTGMQPISHGK 723 (843)
Q Consensus 656 fGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDvwS~G~~l~elltg~~pf~~~~ 723 (843)
||++....... .......|++.|+|||++. +..++.++|||||||++|||++|+.||....
T Consensus 173 fg~~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~ 238 (326)
T 2x7f_A 173 FGVSAQLDRTV-------GRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMH 238 (326)
T ss_dssp CTTTC--------------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSC
T ss_pred CcCceecCcCc-------cccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCc
Confidence 99997654211 1123446899999999997 5678899999999999999999999997544
No 230
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00 E-value=4.9e-38 Score=372.14 Aligned_cols=262 Identities=27% Similarity=0.432 Sum_probs=213.2
Q ss_pred HHHHHHcCCCCCCcccccCCeeEEEEEeC----CCcEEEEEEeccCC-hhhHHHHHHHHHHHHhccCCcccceeeeeecC
Q 003158 505 EMALATNNFNSSTQIGQGGYGKVYKGILP----DGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE 579 (843)
Q Consensus 505 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~ 579 (843)
+.....++|++.+.||+|+||+||+|.+. .+..||||++.... ....+.+.+|+.+++.++||||+++++++. +
T Consensus 384 ~~~i~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~ 462 (656)
T 2j0j_A 384 DYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-E 462 (656)
T ss_dssp GTBCCGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-S
T ss_pred ccccccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-c
Confidence 34445678889999999999999999864 25689999987543 333568999999999999999999999985 4
Q ss_pred CcEEEEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeecccc
Q 003158 580 GEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLS 659 (843)
Q Consensus 580 ~~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla 659 (843)
+..++||||+++|+|.+++... ...+++..++.++.|+++||+|||+++ |+||||||+|||++.++.+||+|||++
T Consensus 463 ~~~~lv~E~~~~g~L~~~l~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDikp~NILl~~~~~vkL~DFG~a 538 (656)
T 2j0j_A 463 NPVWIIMELCTLGELRSFLQVR-KFSLDLASLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLS 538 (656)
T ss_dssp SSCEEEEECCTTCBHHHHHHHT-TTTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECCCCCC
T ss_pred CceEEEEEcCCCCcHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHhCC---ccccccchHhEEEeCCCCEEEEecCCC
Confidence 6789999999999999999754 345889999999999999999999999 999999999999999999999999999
Q ss_pred ccCCCCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHh-CCCCCCCCcchHHHHHHHhhcccc
Q 003158 660 RLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMM 738 (843)
Q Consensus 660 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~ 738 (843)
+...... ........+|+.|+|||++.+..++.++|||||||++|||++ |..||...... +...
T Consensus 539 ~~~~~~~------~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~-~~~~-------- 603 (656)
T 2j0j_A 539 RYMEDST------YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN-DVIG-------- 603 (656)
T ss_dssp CSCCC----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH-HHHH--------
T ss_pred eecCCCc------ceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHH-HHHH--------
Confidence 8764322 112233456789999999999999999999999999999997 99999765432 1111
Q ss_pred hhhccCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhh
Q 003158 739 FSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWN 787 (843)
Q Consensus 739 ~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~ 787 (843)
.+..+.....+..+++.+.+++.+||..+|.+||++.++++.|+.+.+
T Consensus 604 -~i~~~~~~~~~~~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~il~ 651 (656)
T 2j0j_A 604 -RIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILE 651 (656)
T ss_dssp -HHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred -HHHcCCCCCCCccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHH
Confidence 122233344566778899999999999999999999999999998764
No 231
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=4.3e-40 Score=354.20 Aligned_cols=260 Identities=23% Similarity=0.368 Sum_probs=189.7
Q ss_pred HcCCCCCCcccccCCeeEEEEEeCCCcEEEEEEeccCChhhHHHHHHHHHHHHh--ccCCcccceeeeeecCC----cEE
Q 003158 510 TNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSR--LHHRNLVSLVGYCDEEG----EQM 583 (843)
Q Consensus 510 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~h~nIv~l~~~~~~~~----~~~ 583 (843)
.++|.+.+.||+|+||+||+|... ++.||||++... ....+.+|.+++.. ++||||+++++++.... ..+
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 77 (303)
T 3gxj_A 2 ARTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLW 77 (303)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-CT-TSCEEEEECC-T---THHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEEEE
T ss_pred cceeeehhhccCCCCeEEEEEEEc-CcceEEEEeccc---chhhHHHHHHHHHHHhccCcceeeeeeecccCCCccceeE
Confidence 367999999999999999999874 889999998643 34567778888887 79999999999998766 789
Q ss_pred EEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHh--------cCCCCCEEeccCCCCcEEEcCCCcEEEee
Q 003158 584 LVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLH--------TEADPPVFHRDIKASNILLDHKFTAKVAD 655 (843)
Q Consensus 584 lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH--------~~~~~~iiH~Dlkp~NILl~~~~~~kl~D 655 (843)
+||||+++|+|.+++... .+++..++.++.|++.||+||| +.+ |+||||||+|||++.++.+||+|
T Consensus 78 lv~e~~~~g~L~~~l~~~---~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~~---ivH~Dlkp~Nil~~~~~~~kl~D 151 (303)
T 3gxj_A 78 LVSDYHEHGSLFDYLNRY---TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPA---IAHRDLKSKNILVKKNGTCCIAD 151 (303)
T ss_dssp EEEECCTTCCHHHHHHHC---CBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC----CCCSCCCGGGC-CCTTCCC-BCC
T ss_pred EEEeccCCCCHHHHHhcc---CcchHHHHHHHHHHHHHHHHHHHHHhhhccCCC---EeeCcCCHHHeEECCCCCEEEee
Confidence 999999999999999653 4788889999999999999999 777 99999999999999999999999
Q ss_pred ccccccCCCCCCCCcccceeeeeecccCCccCchhcccC------CCCchhhhHHHHHHHHHHHhC----------CCCC
Q 003158 656 FGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTH------KLTDKSDVYSLGVVFLELLTG----------MQPI 719 (843)
Q Consensus 656 fGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~------~~~~~sDvwS~G~~l~elltg----------~~pf 719 (843)
||+++........ .........||+.|+|||++.+. .++.++|||||||++|||++| ..||
T Consensus 152 Fg~a~~~~~~~~~---~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~p~ 228 (303)
T 3gxj_A 152 LGLAVRHDSATDT---IDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPY 228 (303)
T ss_dssp CCC-CCEETTTTE---ESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCCTT
T ss_pred cCcceeccCCCcc---cccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceeeccc
Confidence 9999765432211 01112334699999999999876 344689999999999999999 6666
Q ss_pred CCCcchHHHHHHHhhcccchhhccCC-CCCCC-----HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhh
Q 003158 720 SHGKNIVREVNIAYQSSMMFSVIDGN-MGSYP-----SECVEKFIKLALKCCQDETDARPSMSEVMRELESIWN 787 (843)
Q Consensus 720 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-----~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~ 787 (843)
......... .......+.... .+..+ .++++.+.+++.+||+.+|.+||++.++++.|+.+..
T Consensus 229 ~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~l~~ 297 (303)
T 3gxj_A 229 YDLVPSDPS-----VEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQ 297 (303)
T ss_dssp TTTCC-CCC-----CC-CHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHC-CC
T ss_pred cccCCCCcc-----HHHHHHHHHHhhcCCCccccccchhhHHHHHHHHHHHhccCcccCCCHHHHHHHHHHhhh
Confidence 432110000 000001111111 12233 3777899999999999999999999999999998754
No 232
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=4e-38 Score=344.97 Aligned_cols=204 Identities=26% Similarity=0.401 Sum_probs=171.4
Q ss_pred HHcCCCCCCcccccCCeeEEEEEe-CCCcEEEEEEeccCC-hhhHHHHHHHHHH-HHhccCCcccceeeeeecCCcEEEE
Q 003158 509 ATNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGS-LQGEKEFLTEIQF-LSRLHHRNLVSLVGYCDEEGEQMLV 585 (843)
Q Consensus 509 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~~-l~~l~h~nIv~l~~~~~~~~~~~lV 585 (843)
..++|++.+.||+|+||+||+|.. .+|+.||||++.... .....++..|..+ ++.++||||+++++++.+++..++|
T Consensus 49 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~lv 128 (340)
T 3an0_A 49 KADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWIC 128 (340)
T ss_dssp CSSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEEEE
T ss_pred ehhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEEEE
Confidence 346788899999999999999996 579999999997543 2334556666665 7788999999999999999999999
Q ss_pred EecCCCCCHHHHHhh--cCCCCcchhHHHHHHHHHHHHHHHHhcC-CCCCEEeccCCCCcEEEcCCCcEEEeeccccccC
Q 003158 586 YEFMSNGTLRDQLSA--KSKEPLGFAMRLSIALGSSRGILYLHTE-ADPPVFHRDIKASNILLDHKFTAKVADFGLSRLA 662 (843)
Q Consensus 586 ~e~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~~ia~aL~yLH~~-~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~ 662 (843)
|||+++ +|.+++.. .....+++..++.++.||++||+|||++ + |+||||||+||+++.++.+||+|||+++..
T Consensus 129 ~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~~---ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~ 204 (340)
T 3an0_A 129 MELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLS---VIHRDVKPSNVLINALGQVKMCDFGISGYL 204 (340)
T ss_dssp ECCCSE-EHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHHHHTC---CCCCSCCSTTEEECSTTCEEECCCSHHHHH
T ss_pred HHHhhC-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCC---eecCCCCHHHEEECCCCCEEEeeCCCceec
Confidence 999975 99998865 2445789999999999999999999987 8 999999999999999999999999999765
Q ss_pred CCCCCCCcccceeeeeecccCCccCchhccc----CCCCchhhhHHHHHHHHHHHhCCCCCCCCcc
Q 003158 663 PVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT----HKLTDKSDVYSLGVVFLELLTGMQPISHGKN 724 (843)
Q Consensus 663 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~sDvwS~G~~l~elltg~~pf~~~~~ 724 (843)
.. ........||+.|+|||++.+ ..++.++|||||||++|||++|+.||.....
T Consensus 205 ~~--------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~ 262 (340)
T 3an0_A 205 VD--------SVAKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGT 262 (340)
T ss_dssp SC--------HHHHHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSC
T ss_pred cc--------ccccccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccccc
Confidence 32 111233469999999999753 4789999999999999999999999976443
No 233
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=1.5e-37 Score=336.41 Aligned_cols=202 Identities=29% Similarity=0.454 Sum_probs=172.4
Q ss_pred HHcCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCChhhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEEEe
Q 003158 509 ATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 587 (843)
Q Consensus 509 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e 587 (843)
..++|++.+.||+|+||.||+|... +|+.||+|++.... ..+++.+|+++++.++||||+++++++.+.+..++|||
T Consensus 27 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 104 (314)
T 3com_A 27 PEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVME 104 (314)
T ss_dssp ---CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS--CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred chhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH--HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEee
Confidence 4578999999999999999999975 58999999997533 34578899999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCC
Q 003158 588 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 667 (843)
Q Consensus 588 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~ 667 (843)
|+++++|.+++... ...+++..++.++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||++.......
T Consensus 105 ~~~~~~L~~~~~~~-~~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~- 179 (314)
T 3com_A 105 YCGAGSVSDIIRLR-NKTLTEDEIATILQSTLKGLEYLHFMR---KIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTM- 179 (314)
T ss_dssp CCTTEEHHHHHHHH-TCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCCTTCEECBTTB-
T ss_pred cCCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCC---CcCCCcCHHHEEECCCCCEEEeecccchhhhhhc-
Confidence 99999999999643 345889999999999999999999999 9999999999999999999999999997654321
Q ss_pred CCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCc
Q 003158 668 EGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 723 (843)
Q Consensus 668 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~ 723 (843)
.......|++.|+|||.+.+..++.++|||||||++|||++|+.||....
T Consensus 180 ------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~ 229 (314)
T 3com_A 180 ------AKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIH 229 (314)
T ss_dssp ------SCBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSC
T ss_pred ------cccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCC
Confidence 11234468999999999999999999999999999999999999997544
No 234
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=2.2e-38 Score=340.80 Aligned_cols=276 Identities=24% Similarity=0.352 Sum_probs=188.1
Q ss_pred HHHHcCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCC-hhhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEE
Q 003158 507 ALATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQML 584 (843)
Q Consensus 507 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~l 584 (843)
....++|++.+.||+|+||.||+|... +++.||||++.... ....+++.+|+++++.++||||+++++++...+..++
T Consensus 11 ~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 90 (303)
T 2vwi_A 11 SINRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWL 90 (303)
T ss_dssp --CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEE
T ss_pred ccchhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEE
Confidence 345678999999999999999999954 78999999987543 2335678899999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHhh------cCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccc
Q 003158 585 VYEFMSNGTLRDQLSA------KSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGL 658 (843)
Q Consensus 585 V~e~~~~gsL~~~l~~------~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGl 658 (843)
||||+++++|.+++.. .....+++..++.++.||++||.|||+++ |+||||||+||+++.++.+||+|||+
T Consensus 91 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~dfg~ 167 (303)
T 2vwi_A 91 VMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNG---QIHRDVKAGNILLGEDGSVQIADFGV 167 (303)
T ss_dssp EEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEECTTCCEEECCCHH
T ss_pred EehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCC---CCCCCCChhhEEEcCCCCEEEEeccc
Confidence 9999999999999864 12346899999999999999999999999 99999999999999999999999999
Q ss_pred cccCCCCCCCCcccceeeeeecccCCccCchhccc-CCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhccc
Q 003158 659 SRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSM 737 (843)
Q Consensus 659 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~ 737 (843)
+......... ..........||+.|+|||++.+ ..++.++|||||||++|||++|+.||...........
T Consensus 168 ~~~~~~~~~~--~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~------- 238 (303)
T 2vwi_A 168 SAFLATGGDI--TRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLML------- 238 (303)
T ss_dssp HHHCC-----------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHH-------
T ss_pred hheeccCCCc--cchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhHHHH-------
Confidence 9765432110 01112234568999999999976 5689999999999999999999999976543211111
Q ss_pred chhhccCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCCCCccC
Q 003158 738 MFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSM 817 (843)
Q Consensus 738 ~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~sa~e~ 817 (843)
.............. ++ ...........+++.+||..||++|||++|+
T Consensus 239 ---~~~~~~~~~~~~~~-------------~~-----------------~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l 285 (303)
T 2vwi_A 239 ---TLQNDPPSLETGVQ-------------DK-----------------EMLKKYGKSFRKMISLCLQKDPEKRPTAAEL 285 (303)
T ss_dssp ---HHTSSCCCTTC-----------------------------------CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHH
T ss_pred ---HhccCCCccccccc-------------cc-----------------hhhhhhhHHHHHHHHHHccCChhhCcCHHHH
Confidence 00010000000000 00 0111112223467778888999999999999
Q ss_pred CCCCcccCCC
Q 003158 818 LKHPYVSSDV 827 (843)
Q Consensus 818 L~Hp~f~~~~ 827 (843)
++||||....
T Consensus 286 l~h~~~~~~~ 295 (303)
T 2vwi_A 286 LRHKFFQKAK 295 (303)
T ss_dssp HTSTTC----
T ss_pred hhChhhhcCC
Confidence 9999997643
No 235
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00 E-value=7.5e-38 Score=354.01 Aligned_cols=201 Identities=25% Similarity=0.318 Sum_probs=157.9
Q ss_pred CCCCCCcccccCCeeEEEEEeCCCcEEEEEEeccCChhhHHHHHHHHHHHHhc-cCCcccceeeeeecCCcEEEEEecCC
Q 003158 512 NFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQMLVYEFMS 590 (843)
Q Consensus 512 ~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~lV~e~~~ 590 (843)
.|...+.||+|+||+||.+...+|+.||||++... ..+.+.+|+++++++ +||||+++++++.+.+..++||||+.
T Consensus 16 ~~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~---~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~ 92 (434)
T 2rio_A 16 LVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLID---FCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCN 92 (434)
T ss_dssp CEEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGG---GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCS
T ss_pred eeeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHH---HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCC
Confidence 44556789999999998777678999999998643 234678899999886 89999999999999999999999995
Q ss_pred CCCHHHHHhhcCCCC-----cchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCC-------------CcEE
Q 003158 591 NGTLRDQLSAKSKEP-----LGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHK-------------FTAK 652 (843)
Q Consensus 591 ~gsL~~~l~~~~~~~-----l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~-------------~~~k 652 (843)
|+|.+++....... ..+..++.++.||+.||+|||+++ |+||||||+|||++.+ +.+|
T Consensus 93 -gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~k 168 (434)
T 2rio_A 93 -LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLK---IIHRDLKPQNILVSTSSRFTADQQTGAENLRIL 168 (434)
T ss_dssp -EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEECCHHHHSCCTTCCCSCEEE
T ss_pred -CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHCC---ccccCCChHhEEEecCcccccccccCCCceEEE
Confidence 69999997643221 134456789999999999999999 9999999999999754 4899
Q ss_pred EeeccccccCCCCCCCCcccceeeeeecccCCccCchhccc-------CCCCchhhhHHHHHHHHHHHh-CCCCCCCC
Q 003158 653 VADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT-------HKLTDKSDVYSLGVVFLELLT-GMQPISHG 722 (843)
Q Consensus 653 l~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-------~~~~~~sDvwS~G~~l~ellt-g~~pf~~~ 722 (843)
|+|||+++........ .........||+.|+|||++.+ ..++.++|||||||++|||++ |+.||...
T Consensus 169 L~DFG~a~~~~~~~~~---~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~ 243 (434)
T 2rio_A 169 ISDFGLCKKLDSGQSS---FRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDK 243 (434)
T ss_dssp ECCCTTCEECCC-----------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCST
T ss_pred EcccccceecCCCCcc---ceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCc
Confidence 9999999876532210 0111234579999999999976 678999999999999999999 99999654
No 236
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00 E-value=8e-38 Score=338.41 Aligned_cols=212 Identities=25% Similarity=0.344 Sum_probs=172.3
Q ss_pred ccHHHHHHHHcCCCCCCcccccCCeeEEEEEeCCCcEEEEEEeccCC--hhhHHHHHHHHHHHHhcc--CCcccceeeee
Q 003158 501 FTYGEMALATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLH--HRNLVSLVGYC 576 (843)
Q Consensus 501 ~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~--h~nIv~l~~~~ 576 (843)
+.++.+....++|++.+.||+|+||.||+|...+++.||||++.... ....+.+.+|++++++++ |+||+++++++
T Consensus 18 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~ 97 (313)
T 3cek_A 18 LYFQSMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYE 97 (313)
T ss_dssp --CCEEEETTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEE
T ss_pred CCeeeeeeccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEe
Confidence 33444445567899999999999999999998889999999987532 334577899999999997 59999999999
Q ss_pred ecCCcEEEEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeec
Q 003158 577 DEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADF 656 (843)
Q Consensus 577 ~~~~~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~Df 656 (843)
.+.+..++||| +.+++|.+++.... .+++..++.++.|+++||.|||+++ |+||||||+||++++ +.+||+||
T Consensus 98 ~~~~~~~lv~e-~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIl~~~-~~~kL~Df 170 (313)
T 3cek_A 98 ITDQYIYMVME-CGNIDLNSWLKKKK--SIDPWERKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIVD-GMLKLIDF 170 (313)
T ss_dssp ECSSEEEEEEC-CCSEEHHHHHHHCS--SCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEEET-TEEEECCC
T ss_pred ecCCEEEEEEe-cCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCcccEEEEC-CeEEEeec
Confidence 99999999999 55889999997643 5888999999999999999999999 999999999999965 89999999
Q ss_pred cccccCCCCCCCCcccceeeeeecccCCccCchhccc-----------CCCCchhhhHHHHHHHHHHHhCCCCCCCCcc
Q 003158 657 GLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT-----------HKLTDKSDVYSLGVVFLELLTGMQPISHGKN 724 (843)
Q Consensus 657 Gla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----------~~~~~~sDvwS~G~~l~elltg~~pf~~~~~ 724 (843)
|+++....... ........|++.|+|||.+.+ ..++.++|||||||++|||++|+.||.....
T Consensus 171 g~~~~~~~~~~-----~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~ 244 (313)
T 3cek_A 171 GIANQMQPDTT-----SVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN 244 (313)
T ss_dssp SSSCC-------------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCS
T ss_pred cccccccCccc-----cccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHH
Confidence 99986543211 111234568999999999976 4688899999999999999999999976543
No 237
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00 E-value=3.6e-39 Score=350.10 Aligned_cols=251 Identities=23% Similarity=0.395 Sum_probs=199.8
Q ss_pred HHHcCCCCCCcccccCCeeEEEEEe-CCCcEEEEEEeccCChh------hHHHHHHHHHHHHhcc--CCcccceeeeeec
Q 003158 508 LATNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQ------GEKEFLTEIQFLSRLH--HRNLVSLVGYCDE 578 (843)
Q Consensus 508 ~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~--h~nIv~l~~~~~~ 578 (843)
...++|++.+.||+|+||.||+|.. .+++.||||++...... ..+.+.+|+.++++++ |+||+++++++.+
T Consensus 40 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~ 119 (320)
T 3a99_A 40 PLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFER 119 (320)
T ss_dssp CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEEC
T ss_pred CccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEec
Confidence 3457899999999999999999995 47899999998753221 2245678999999996 5999999999999
Q ss_pred CCcEEEEEecCCC-CCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEc-CCCcEEEeec
Q 003158 579 EGEQMLVYEFMSN-GTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLD-HKFTAKVADF 656 (843)
Q Consensus 579 ~~~~~lV~e~~~~-gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~-~~~~~kl~Df 656 (843)
.+..++|||++.+ ++|.+++.... .+++..++.++.||++||+|||+.+ |+||||||+||+++ +++.+||+||
T Consensus 120 ~~~~~lv~e~~~~~~~L~~~l~~~~--~l~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~~kL~Df 194 (320)
T 3a99_A 120 PDSFVLILERPEPVQDLFDFITERG--ALQEELARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDF 194 (320)
T ss_dssp SSEEEEEEECCSSEEEHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEETTTTEEEECCC
T ss_pred CCcEEEEEEcCCCCccHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHCC---cEeCCCCHHHEEEeCCCCCEEEeeC
Confidence 9999999999976 89999997643 5889999999999999999999999 99999999999999 7899999999
Q ss_pred cccccCCCCCCCCcccceeeeeecccCCccCchhcccCCC-CchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhc
Q 003158 657 GLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKL-TDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQS 735 (843)
Q Consensus 657 Gla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~ 735 (843)
|+++...... .....||+.|+|||++.+..+ +.++|||||||++|||++|+.||......
T Consensus 195 g~~~~~~~~~---------~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~---------- 255 (320)
T 3a99_A 195 GSGALLKDTV---------YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI---------- 255 (320)
T ss_dssp TTCEECCSSC---------BCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHHH----------
T ss_pred cccccccccc---------ccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChhhh----------
Confidence 9998764221 233468999999999987765 67899999999999999999999642210
Q ss_pred ccchhhccCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCCCCc
Q 003158 736 SMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSS 815 (843)
Q Consensus 736 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~sa~ 815 (843)
.... ...+..++++ ..+++.+||..||++|||++
T Consensus 256 ------~~~~-~~~~~~~~~~---------------------------------------~~~li~~~l~~dp~~Rps~~ 289 (320)
T 3a99_A 256 ------IRGQ-VFFRQRVSSE---------------------------------------CQHLIRWCLALRPSDRPTFE 289 (320)
T ss_dssp ------HHCC-CCCSSCCCHH---------------------------------------HHHHHHHHTCSSGGGSCCHH
T ss_pred ------hccc-ccccccCCHH---------------------------------------HHHHHHHHccCChhhCcCHH
Confidence 0000 0011111111 22566677888888888899
Q ss_pred cCCCCCcccCCCC
Q 003158 816 SMLKHPYVSSDVS 828 (843)
Q Consensus 816 e~L~Hp~f~~~~~ 828 (843)
|+++||||.....
T Consensus 290 ~ll~hp~~~~~~~ 302 (320)
T 3a99_A 290 EIQNHPWMQDVLL 302 (320)
T ss_dssp HHHTSGGGSSCCC
T ss_pred HHhcCHhhcCccC
Confidence 9999999987554
No 238
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00 E-value=1e-37 Score=362.48 Aligned_cols=204 Identities=28% Similarity=0.421 Sum_probs=174.7
Q ss_pred HcCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccC-ChhhHHHHHHHHHHHHhccCCcccceeeeeec------CCc
Q 003158 510 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEG-SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDE------EGE 581 (843)
Q Consensus 510 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~------~~~ 581 (843)
.++|++.+.||+|+||+||+|... +|+.||||++... .....+.+.+|++++++++||||+++++++.. .+.
T Consensus 13 ~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~ 92 (676)
T 3qa8_A 13 CGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDL 92 (676)
T ss_dssp ----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSS
T ss_pred CCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCe
Confidence 368999999999999999999964 6899999998754 33345678999999999999999999999765 677
Q ss_pred EEEEEecCCCCCHHHHHhhcC-CCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCc---EEEeecc
Q 003158 582 QMLVYEFMSNGTLRDQLSAKS-KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFT---AKVADFG 657 (843)
Q Consensus 582 ~~lV~e~~~~gsL~~~l~~~~-~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~---~kl~DfG 657 (843)
.++||||+++|+|.+++.... ...+++..++.++.|++.||+|||+.+ |+||||||+||+++.++. +||+|||
T Consensus 93 ~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~g---IVHrDLKP~NILl~~~g~~~~vKL~DFG 169 (676)
T 3qa8_A 93 PLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENR---IIHRDLKPENIVLQPGPQRLIHKIIDLG 169 (676)
T ss_dssp CCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHTT---BCCCCCCSTTEEEECCSSSCEEEECSCC
T ss_pred EEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCCHHHeEeecCCCceeEEEcccc
Confidence 899999999999999997643 236889999999999999999999999 999999999999997664 9999999
Q ss_pred ccccCCCCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCcc
Q 003158 658 LSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKN 724 (843)
Q Consensus 658 la~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~ 724 (843)
++....... ......||+.|+|||.+.+..++.++|||||||++|||++|+.||.....
T Consensus 170 ~a~~~~~~~--------~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~ 228 (676)
T 3qa8_A 170 YAKELDQGE--------LCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQ 228 (676)
T ss_dssp CCCBTTSCC--------CCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCH
T ss_pred ccccccccc--------ccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccc
Confidence 998764322 12345789999999999999999999999999999999999999976543
No 239
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00 E-value=1.8e-38 Score=344.35 Aligned_cols=267 Identities=22% Similarity=0.320 Sum_probs=205.6
Q ss_pred HHHHHHHHcCCCCCCcccccCCeeEEEEEeCCCcEEEEEEeccCCh--hhHHHHHHHHHHHHhccCCcccceeeeeecCC
Q 003158 503 YGEMALATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEG 580 (843)
Q Consensus 503 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~ 580 (843)
..++....++|++.+.||+|+||.||+|...+ .||+|++..... ...+.+.+|+.+++.++||||+++++++.+.+
T Consensus 25 ~~~~~i~~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~ 102 (319)
T 2y4i_B 25 LQEWDIPFEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPP 102 (319)
T ss_dssp GGGSSSCCSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSS
T ss_pred cccccCCHHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCC
Confidence 34445556789999999999999999999754 499999875322 22356788999999999999999999999999
Q ss_pred cEEEEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccc
Q 003158 581 EQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSR 660 (843)
Q Consensus 581 ~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~ 660 (843)
..++||||+++++|.+++... ...+++..++.++.|+++||+|||+++ |+||||||+||+++ ++.+||+|||+++
T Consensus 103 ~~~iv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~al~~lH~~~---i~H~dlkp~NIl~~-~~~~~l~Dfg~~~ 177 (319)
T 2y4i_B 103 HLAIITSLCKGRTLYSVVRDA-KIVLDVNKTRQIAQEIVKGMGYLHAKG---ILHKDLKSKNVFYD-NGKVVITDFGLFS 177 (319)
T ss_dssp CEEEECBCCCSEEHHHHTTSS-CCCCCSHHHHHHHHHHHHHHHHHHHTT---CCCCCCCSTTEEEC---CCEECCCSCCC
T ss_pred ceEEEeecccCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCC---ccccCCChhhEEEe-CCCEEEeecCCcc
Confidence 999999999999999999654 346889999999999999999999999 99999999999998 6799999999987
Q ss_pred cCCCCCCCCcccceeeeeecccCCccCchhccc---------CCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHH
Q 003158 661 LAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT---------HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNI 731 (843)
Q Consensus 661 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---------~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~ 731 (843)
......... .........|++.|+|||.+.+ ..++.++|||||||++|||++|+.||........ ...
T Consensus 178 ~~~~~~~~~--~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~-~~~ 254 (319)
T 2y4i_B 178 ISGVLQAGR--REDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAI-IWQ 254 (319)
T ss_dssp ------------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHHH-HHH
T ss_pred ccccccccc--cccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH-HHH
Confidence 653221110 1122234458999999999975 4578899999999999999999999976543211 111
Q ss_pred HhhcccchhhccCCCCC-CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhh
Q 003158 732 AYQSSMMFSVIDGNMGS-YPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNM 788 (843)
Q Consensus 732 ~~~~~~~~~~~~~~~~~-~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~ 788 (843)
+..+.... .+..++..+.+++..||..+|.+||++.++++.|+.+.+.
T Consensus 255 ---------~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~ 303 (319)
T 2y4i_B 255 ---------MGTGMKPNLSQIGMGKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKR 303 (319)
T ss_dssp ---------HHTTCCCCCCCSSCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC---
T ss_pred ---------hccCCCCCCCcCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHh
Confidence 11111111 1223556788999999999999999999999999987654
No 240
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00 E-value=2.6e-37 Score=348.55 Aligned_cols=201 Identities=25% Similarity=0.363 Sum_probs=160.4
Q ss_pred HcCCCCCCcccccCCeeEEEEEeCCCcEEEEEEeccCChhhHHHHHHHHHHHHhc-cCCcccceeeeeecCCcEEEEEec
Q 003158 510 TNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQMLVYEF 588 (843)
Q Consensus 510 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~lV~e~ 588 (843)
..+|...+.||+|+||+||.....+++.||||++...... .+.+|+++++.+ +||||+++++++.+.+..++||||
T Consensus 23 ~~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~~---~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~ 99 (432)
T 3p23_A 23 KISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECFS---FADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIEL 99 (432)
T ss_dssp TEEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTEE---ECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred cEEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHHH---HHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEEC
Confidence 4568888999999999976655668999999998754332 356799999999 799999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcC-----CCcEEEeeccccccCC
Q 003158 589 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDH-----KFTAKVADFGLSRLAP 663 (843)
Q Consensus 589 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~-----~~~~kl~DfGla~~~~ 663 (843)
+. |+|.+++.... ....+..++.++.||++||+|||+++ |+||||||+|||++. ...+||+|||+|+...
T Consensus 100 ~~-g~L~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~ 174 (432)
T 3p23_A 100 CA-ATLQEYVEQKD-FAHLGLEPITLLQQTTSGLAHLHSLN---IVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLA 174 (432)
T ss_dssp CS-EEHHHHHHSSS-CCCCSSCHHHHHHHHHHHHHHHHHTT---CCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC-
T ss_pred CC-CCHHHHHHhcC-CCccchhHHHHHHHHHHHHHHHHHCc---CEeCCCCHHHEEEecCCCCCceeEEEecccceeecc
Confidence 95 69999997653 23555667889999999999999999 999999999999953 3368899999998764
Q ss_pred CCCCCCcccceeeeeecccCCccCchhcc---cCCCCchhhhHHHHHHHHHHHh-CCCCCCCC
Q 003158 664 VPDIEGIVPAHVSTVVKGTPGYLDPEYFL---THKLTDKSDVYSLGVVFLELLT-GMQPISHG 722 (843)
Q Consensus 664 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDvwS~G~~l~ellt-g~~pf~~~ 722 (843)
.... .........||+.|+|||++. ...++.++|||||||++|||++ |..||...
T Consensus 175 ~~~~----~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~ 233 (432)
T 3p23_A 175 VGRH----SFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKS 233 (432)
T ss_dssp ---------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBST
T ss_pred CCCc----ceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchh
Confidence 3211 011234467999999999998 4667889999999999999999 88898543
No 241
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=6.3e-37 Score=329.24 Aligned_cols=200 Identities=25% Similarity=0.389 Sum_probs=162.4
Q ss_pred HcCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCChhhHHHHHHHHHHHHhccCCcccceeeeeec----------
Q 003158 510 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDE---------- 578 (843)
Q Consensus 510 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~---------- 578 (843)
.++|++.+.||+|+||.||+|... +++.||||++.. .....+.+.+|+++++.++||||+++++++.+
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~ 83 (303)
T 1zy4_A 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRH-TEEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTA 83 (303)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEE-EHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC----
T ss_pred cccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEec-cHHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhcc
Confidence 567999999999999999999964 799999999864 33445678999999999999999999998754
Q ss_pred ---CCcEEEEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEee
Q 003158 579 ---EGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVAD 655 (843)
Q Consensus 579 ---~~~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~D 655 (843)
.+..++||||+++|+|.+++... ...+++..++.++.|+++||+|||+++ |+||||||+||+++.++.+||+|
T Consensus 84 ~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dlkp~Nil~~~~~~~kl~d 159 (303)
T 1zy4_A 84 VKKKSTLFIQMEYCENGTLYDLIHSE-NLNQQRDEYWRLFRQILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGD 159 (303)
T ss_dssp --CEEEEEEEEECCCSCBHHHHHHHS-CGGGCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECC
T ss_pred cccCCceEEEEecCCCCCHHHhhhcc-ccccchHHHHHHHHHHHHHHHHHHhCC---eecccCCHHhEEEcCCCCEEEee
Confidence 45679999999999999999764 345778899999999999999999999 99999999999999999999999
Q ss_pred ccccccCCCCCCCC-------cccceeeeeecccCCccCchhcccC-CCCchhhhHHHHHHHHHHHh
Q 003158 656 FGLSRLAPVPDIEG-------IVPAHVSTVVKGTPGYLDPEYFLTH-KLTDKSDVYSLGVVFLELLT 714 (843)
Q Consensus 656 fGla~~~~~~~~~~-------~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwS~G~~l~ellt 714 (843)
||++.......... ...........|++.|+|||++.+. .++.++|||||||++|||++
T Consensus 160 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~ 226 (303)
T 1zy4_A 160 FGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY 226 (303)
T ss_dssp CCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS
T ss_pred CcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh
Confidence 99998654221000 0001222445689999999999864 78999999999999999998
No 242
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00 E-value=4.5e-37 Score=334.74 Aligned_cols=202 Identities=28% Similarity=0.403 Sum_probs=153.1
Q ss_pred HcCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCCh-hhHHHHHHHHH-HHHhccCCcccceeeeeecCCcEEEEE
Q 003158 510 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL-QGEKEFLTEIQ-FLSRLHHRNLVSLVGYCDEEGEQMLVY 586 (843)
Q Consensus 510 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~-~l~~l~h~nIv~l~~~~~~~~~~~lV~ 586 (843)
.++|++.+.||+|+||.||+|... +|+.||||++..... ....++..|+. +++.++||||+++++++.+.+..++||
T Consensus 21 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~ 100 (327)
T 3aln_A 21 AEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICM 100 (327)
T ss_dssp SCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEE
Confidence 468889999999999999999975 789999999976432 33455666666 777889999999999999999999999
Q ss_pred ecCCCCCHHHHHhh---cCCCCcchhHHHHHHHHHHHHHHHHhcC-CCCCEEeccCCCCcEEEcCCCcEEEeeccccccC
Q 003158 587 EFMSNGTLRDQLSA---KSKEPLGFAMRLSIALGSSRGILYLHTE-ADPPVFHRDIKASNILLDHKFTAKVADFGLSRLA 662 (843)
Q Consensus 587 e~~~~gsL~~~l~~---~~~~~l~~~~~~~i~~~ia~aL~yLH~~-~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~ 662 (843)
||++ |+|.+++.. .....+++..+..++.|+++||.|||+. + |+||||||+||+++.++.+||+|||+++..
T Consensus 101 e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~---ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~ 176 (327)
T 3aln_A 101 ELMS-TSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLK---IIHRDIKPSNILLDRSGNIKLCDFGISGQL 176 (327)
T ss_dssp CCCS-EEHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHS---CCCSCCCGGGEEEETTTEEEECCCSSSCC-
T ss_pred eecC-CChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCC---EeECCCCHHHEEEcCCCCEEEccCCCceec
Confidence 9997 588887753 2345689999999999999999999998 8 999999999999999999999999999765
Q ss_pred CCCCCCCcccceeeeeecccCCccCchhc----ccCCCCchhhhHHHHHHHHHHHhCCCCCCCCc
Q 003158 663 PVPDIEGIVPAHVSTVVKGTPGYLDPEYF----LTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 723 (843)
Q Consensus 663 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~----~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~ 723 (843)
... .......||+.|+|||++ .+..++.++|||||||++|||++|+.||....
T Consensus 177 ~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~ 233 (327)
T 3aln_A 177 VDS--------IAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWN 233 (327)
T ss_dssp -------------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC-
T ss_pred ccc--------cccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcc
Confidence 422 112334689999999999 45678999999999999999999999997543
No 243
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00 E-value=3.3e-37 Score=333.42 Aligned_cols=202 Identities=27% Similarity=0.412 Sum_probs=164.8
Q ss_pred HHHHHcCCCCCCcccccCCeeEEEEEe-CCCcEEEEEEeccCChh------hHHHHHHHHHHHHhc----cCCcccceee
Q 003158 506 MALATNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQ------GEKEFLTEIQFLSRL----HHRNLVSLVG 574 (843)
Q Consensus 506 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l----~h~nIv~l~~ 574 (843)
.....++|++.+.||+|+||.||+|.. .+++.||||++...... ....+.+|+++++++ +|+||+++++
T Consensus 26 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~ 105 (312)
T 2iwi_A 26 REAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLD 105 (312)
T ss_dssp -------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEE
T ss_pred hhhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEE
Confidence 344567899999999999999999986 47899999999754332 223456799999998 8999999999
Q ss_pred eeecCCcEEEEEec-CCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEc-CCCcEE
Q 003158 575 YCDEEGEQMLVYEF-MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLD-HKFTAK 652 (843)
Q Consensus 575 ~~~~~~~~~lV~e~-~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~-~~~~~k 652 (843)
++.+.+..++|||| +.+++|.+++.... .+++..++.++.||++||+|||+.+ |+||||||+||+++ +++.+|
T Consensus 106 ~~~~~~~~~~v~e~~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~k 180 (312)
T 2iwi_A 106 WFETQEGFMLVLERPLPAQDLFDYITEKG--PLGEGPSRCFFGQVVAAIQHCHSRG---VVHRDIKDENILIDLRRGCAK 180 (312)
T ss_dssp EC-----CEEEEECCSSEEEHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHHT---EECCCCSGGGEEEETTTTEEE
T ss_pred EEecCCeEEEEEEecCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCChhhEEEeCCCCeEE
Confidence 99999999999999 78999999997643 5889999999999999999999999 99999999999999 889999
Q ss_pred EeeccccccCCCCCCCCcccceeeeeecccCCccCchhcccCCCC-chhhhHHHHHHHHHHHhCCCCCCC
Q 003158 653 VADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLT-DKSDVYSLGVVFLELLTGMQPISH 721 (843)
Q Consensus 653 l~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~sDvwS~G~~l~elltg~~pf~~ 721 (843)
|+|||+++...... .....|+..|+|||++.+..+. .++|||||||++|||++|+.||..
T Consensus 181 l~dfg~~~~~~~~~---------~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~ 241 (312)
T 2iwi_A 181 LIDFGSGALLHDEP---------YTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFER 241 (312)
T ss_dssp ECCCSSCEECCSSC---------BCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCS
T ss_pred EEEcchhhhcccCc---------ccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCC
Confidence 99999998764321 2344689999999999877664 489999999999999999999964
No 244
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00 E-value=1.2e-36 Score=324.84 Aligned_cols=201 Identities=28% Similarity=0.428 Sum_probs=174.0
Q ss_pred HHcCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCC--hhhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEE
Q 003158 509 ATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLV 585 (843)
Q Consensus 509 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV 585 (843)
..++|++.+.||+|+||+||+|... +++.||+|++.... ....+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 20 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 99 (287)
T 2wei_A 20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIV 99 (287)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred HhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEEE
Confidence 3568999999999999999999975 78999999986532 23457889999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCC---CcEEEeeccccccC
Q 003158 586 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHK---FTAKVADFGLSRLA 662 (843)
Q Consensus 586 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~---~~~kl~DfGla~~~ 662 (843)
|||+++++|.+++.... .+++..++.++.|+++||.|||+++ |+||||||+||+++.+ +.+||+|||++...
T Consensus 100 ~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~ 174 (287)
T 2wei_A 100 GELYTGGELFDEIIKRK--RFSEHDAARIIKQVFSGITYMHKHN---IVHRDLKPENILLESKEKDCDIKIIDFGLSTCF 174 (287)
T ss_dssp ECCCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESCSSTTCCEEECSTTGGGTB
T ss_pred EEccCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCChhhEEEecCCCcccEEEeccCcceee
Confidence 99999999999986643 4889999999999999999999999 9999999999999754 47999999999865
Q ss_pred CCCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCc
Q 003158 663 PVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 723 (843)
Q Consensus 663 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~ 723 (843)
.... ......|++.|+|||.+.+ .++.++||||||+++|||++|+.||....
T Consensus 175 ~~~~--------~~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~ 226 (287)
T 2wei_A 175 QQNT--------KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKN 226 (287)
T ss_dssp CCCS--------SCSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred cCCC--------ccccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCC
Confidence 4321 1123458899999999876 48999999999999999999999997643
No 245
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00 E-value=3.9e-37 Score=333.56 Aligned_cols=202 Identities=25% Similarity=0.382 Sum_probs=153.7
Q ss_pred HcCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCChh-hH-HHHHHHHHHHHhccCCcccceeeeeecCCcEEEEE
Q 003158 510 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ-GE-KEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 586 (843)
Q Consensus 510 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~-~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~ 586 (843)
.++|++.+.||+|+||.||+|... +|+.||||++...... .. +.+.++..+++.++||||+++++++.+.+..++||
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~ 103 (318)
T 2dyl_A 24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAM 103 (318)
T ss_dssp GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred hccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEE
Confidence 467888999999999999999975 7899999999764332 22 33444555788889999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcC-CCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCC
Q 003158 587 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTE-ADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVP 665 (843)
Q Consensus 587 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~-~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~ 665 (843)
||+ ++.+..+.... ...+++..++.++.|+++||.|||++ + |+||||||+||+++.++.+||+|||++......
T Consensus 104 e~~-~~~~~~l~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~~---i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~ 178 (318)
T 2dyl_A 104 ELM-GTCAEKLKKRM-QGPIPERILGKMTVAIVKALYYLKEKHG---VIHRDVKPSNILLDERGQIKLCDFGISGRLVDD 178 (318)
T ss_dssp CCC-SEEHHHHHHHH-TSCCCHHHHHHHHHHHHHHHHHHHHHHC---CCCCCCCGGGEEECTTSCEEECCCTTC------
T ss_pred ecc-CCcHHHHHHHh-ccCCCHHHHHHHHHHHHHHHHHHHhhCC---EEeCCCCHHHEEECCCCCEEEEECCCchhccCC
Confidence 999 55666555432 34688999999999999999999995 8 999999999999999999999999999765422
Q ss_pred CCCCcccceeeeeecccCCccCchhcc-----cCCCCchhhhHHHHHHHHHHHhCCCCCCCCcc
Q 003158 666 DIEGIVPAHVSTVVKGTPGYLDPEYFL-----THKLTDKSDVYSLGVVFLELLTGMQPISHGKN 724 (843)
Q Consensus 666 ~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~ 724 (843)
. ......|++.|+|||++. ...++.++|||||||++|||++|+.||.....
T Consensus 179 ~--------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~ 234 (318)
T 2dyl_A 179 K--------AKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKT 234 (318)
T ss_dssp ----------------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCS
T ss_pred c--------cccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCc
Confidence 1 123446899999999995 45688999999999999999999999976443
No 246
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=100.00 E-value=3.7e-37 Score=336.73 Aligned_cols=191 Identities=24% Similarity=0.267 Sum_probs=159.7
Q ss_pred HcCCCCCCcccccCCeeEEEEEeCCCcEEEEEEeccCCh--------hhHHHHHHHHHHHHhcc----------------
Q 003158 510 TNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSL--------QGEKEFLTEIQFLSRLH---------------- 565 (843)
Q Consensus 510 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~---------------- 565 (843)
.++|++.+.||+|+||+||+|+. +|+.||||++..... ...+.+.+|+++++.++
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l 97 (336)
T 2vuw_A 19 TEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGL 97 (336)
T ss_dssp HHHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCE
T ss_pred cccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhh
Confidence 46788999999999999999998 789999999975422 22367889999999886
Q ss_pred ----------CCcccceeeeeec-------------CCcEEEEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHH
Q 003158 566 ----------HRNLVSLVGYCDE-------------EGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGI 622 (843)
Q Consensus 566 ----------h~nIv~l~~~~~~-------------~~~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL 622 (843)
||||+++++++.+ .+..++||||+++|++.+.+.+ ..+++..++.++.||+.||
T Consensus 98 ~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~---~~~~~~~~~~i~~qi~~aL 174 (336)
T 2vuw_A 98 NSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT---KLSSLATAKSILHQLTASL 174 (336)
T ss_dssp EEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT---TCCCHHHHHHHHHHHHHHH
T ss_pred cceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh---cCCCHHHHHHHHHHHHHHH
Confidence 5555555555544 6889999999999977666633 3578999999999999999
Q ss_pred HHHh-cCCCCCEEeccCCCCcEEEcCCC--------------------cEEEeeccccccCCCCCCCCcccceeeeeecc
Q 003158 623 LYLH-TEADPPVFHRDIKASNILLDHKF--------------------TAKVADFGLSRLAPVPDIEGIVPAHVSTVVKG 681 (843)
Q Consensus 623 ~yLH-~~~~~~iiH~Dlkp~NILl~~~~--------------------~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~g 681 (843)
+||| +++ |+||||||+|||++.++ .+||+|||+|+.... ....|
T Consensus 175 ~~lH~~~~---ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~------------~~~~g 239 (336)
T 2vuw_A 175 AVAEASLR---FEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERD------------GIVVF 239 (336)
T ss_dssp HHHHHHHC---CBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEET------------TEEEC
T ss_pred HHHHHhCC---EeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCC------------CcEEE
Confidence 9999 899 99999999999999887 999999999986532 13469
Q ss_pred cCCccCchhcccCCCCchhhhHHHHHH-HHHHHhCCCCCC
Q 003158 682 TPGYLDPEYFLTHKLTDKSDVYSLGVV-FLELLTGMQPIS 720 (843)
Q Consensus 682 t~~y~aPE~~~~~~~~~~sDvwS~G~~-l~elltg~~pf~ 720 (843)
|+.|+|||++.+.. +.++||||+|++ .+++++|..||.
T Consensus 240 t~~y~aPE~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~ 278 (336)
T 2vuw_A 240 CDVSMDEDLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYS 278 (336)
T ss_dssp CCCTTCSGGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHH
T ss_pred eecccChhhhcCCC-ccceehhhhhCCCCcccccccCCCc
Confidence 99999999998766 889999998777 778888988883
No 247
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=6e-37 Score=344.28 Aligned_cols=198 Identities=17% Similarity=0.149 Sum_probs=156.2
Q ss_pred cCCCCCCcccccCCeeEEEEEe-CCCcEEEEEEeccCChh---hHHHHHHHHHHHHhccC-Ccccceeee----------
Q 003158 511 NNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQ---GEKEFLTEIQFLSRLHH-RNLVSLVGY---------- 575 (843)
Q Consensus 511 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h-~nIv~l~~~---------- 575 (843)
.+|...+.||+|+||+||+|.+ .+|+.||||++...... ..+.+.+|+.+++.++| +|......+
T Consensus 78 ~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 157 (413)
T 3dzo_A 78 RTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLV 157 (413)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEE
T ss_pred eeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhc
Confidence 3466778999999999999995 47999999998843322 24678999999999977 332221111
Q ss_pred -----------eec-----CCcEEEEEecCCCCCHHHHHh-----hcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEE
Q 003158 576 -----------CDE-----EGEQMLVYEFMSNGTLRDQLS-----AKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVF 634 (843)
Q Consensus 576 -----------~~~-----~~~~~lV~e~~~~gsL~~~l~-----~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ii 634 (843)
+.. ....+++|+++ +++|.++++ ......+++..++.++.||++||+|||+++ |+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ii 233 (413)
T 3dzo_A 158 KDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYG---LV 233 (413)
T ss_dssp ECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTT---EE
T ss_pred ccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhCC---cc
Confidence 111 22467888876 689999985 233456889999999999999999999999 99
Q ss_pred eccCCCCcEEEcCCCcEEEeeccccccCCCCCCCCcccceeeeeecccCCccCchhc----------ccCCCCchhhhHH
Q 003158 635 HRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYF----------LTHKLTDKSDVYS 704 (843)
Q Consensus 635 H~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~----------~~~~~~~~sDvwS 704 (843)
||||||+|||++.++.+||+|||+++... .......| +.|+|||++ .+..++.++||||
T Consensus 234 HrDiKp~NILl~~~~~~kL~DFG~a~~~~----------~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwS 302 (413)
T 3dzo_A 234 HTYLRPVDIVLDQRGGVFLTGFEHLVRDG----------ASAVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWT 302 (413)
T ss_dssp CSCCCGGGEEECTTCCEEECCGGGCEETT----------EEECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHH
T ss_pred cCCcccceEEEecCCeEEEEeccceeecC----------CccccCCC-CceeCchhhhccccccccccCcCCCchhhHHH
Confidence 99999999999999999999999987643 12344567 999999999 5556888999999
Q ss_pred HHHHHHHHHhCCCCCCCCc
Q 003158 705 LGVVFLELLTGMQPISHGK 723 (843)
Q Consensus 705 ~G~~l~elltg~~pf~~~~ 723 (843)
|||++|||++|+.||....
T Consensus 303 lGvil~elltg~~Pf~~~~ 321 (413)
T 3dzo_A 303 LGLAIYWIWCADLPNTDDA 321 (413)
T ss_dssp HHHHHHHHHHSSCCCCTTG
T ss_pred HHHHHHHHHHCCCCCCCcc
Confidence 9999999999999997543
No 248
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00 E-value=5.6e-35 Score=311.43 Aligned_cols=229 Identities=12% Similarity=0.073 Sum_probs=185.7
Q ss_pred HcCCCCCCcccccCCeeEEEEEeC-CCcEEEEEEeccCCh---hhHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEE
Q 003158 510 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLV 585 (843)
Q Consensus 510 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV 585 (843)
.++|++.+.||+|+||.||+|... +++.||||++..... ...+.+.+|+++++.++||||+++++++.+.+..++|
T Consensus 30 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 109 (286)
T 3uqc_A 30 NGRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVV 109 (286)
T ss_dssp TTTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred cCcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEE
Confidence 367999999999999999999975 589999999986433 2346789999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCC
Q 003158 586 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVP 665 (843)
Q Consensus 586 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~ 665 (843)
|||+++++|.++++.. ....++..++.|+++||+|||+++ |+||||||+|||+++++.+||+++|
T Consensus 110 ~e~~~g~~L~~~l~~~----~~~~~~~~i~~ql~~aL~~lH~~g---ivH~Dikp~NIll~~~g~~kl~~~~-------- 174 (286)
T 3uqc_A 110 AEWIRGGSLQEVADTS----PSPVGAIRAMQSLAAAADAAHRAG---VALSIDHPSRVRVSIDGDVVLAYPA-------- 174 (286)
T ss_dssp EECCCEEEHHHHHTTC----CCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEEETTSCEEECSCC--------
T ss_pred EEecCCCCHHHHHhcC----CChHHHHHHHHHHHHHHHHHHHCC---CccCCCCcccEEEcCCCCEEEEecc--------
Confidence 9999999999999542 234467889999999999999999 9999999999999999999998544
Q ss_pred CCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhhccCC
Q 003158 666 DIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGN 745 (843)
Q Consensus 666 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 745 (843)
|++ .++.++|||||||++|||+||+.||........ .......+.+.
T Consensus 175 -------------------~~~-------~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~-------~~~~~~~~~~~ 221 (286)
T 3uqc_A 175 -------------------TMP-------DANPQDDIRGIGASLYALLVNRWPLPEAGVRSG-------LAPAERDTAGQ 221 (286)
T ss_dssp -------------------CCT-------TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCC-------SEECCBCTTSC
T ss_pred -------------------ccC-------CCCchhHHHHHHHHHHHHHHCCCCCCcCCcchh-------hHHHHHHhccC
Confidence 233 268899999999999999999999976542100 00000111111
Q ss_pred CC---CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhh
Q 003158 746 MG---SYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWN 787 (843)
Q Consensus 746 ~~---~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~ 787 (843)
.. ..+..+++.+.+++.+||+.+|.+| ++.++++.|+.+..
T Consensus 222 ~~~~~~~~~~~~~~l~~li~~~l~~dP~~R-s~~el~~~L~~~~~ 265 (286)
T 3uqc_A 222 PIEPADIDRDIPFQISAVAARSVQGDGGIR-SASTLLNLMQQATA 265 (286)
T ss_dssp BCCHHHHCTTSCHHHHHHHHHHHCTTSSCC-CHHHHHHHHHHHHC
T ss_pred CCChhhcccCCCHHHHHHHHHHcccCCccC-CHHHHHHHHHHHhc
Confidence 11 1123456789999999999999999 99999999998764
No 249
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00 E-value=1.2e-34 Score=311.21 Aligned_cols=239 Identities=20% Similarity=0.320 Sum_probs=181.7
Q ss_pred cCCCCC-CcccccCCeeEEEEEe-CCCcEEEEEEeccCChhhHHHHHHHHHHH-HhccCCcccceeeeeec----CCcEE
Q 003158 511 NNFNSS-TQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQGEKEFLTEIQFL-SRLHHRNLVSLVGYCDE----EGEQM 583 (843)
Q Consensus 511 ~~~~~~-~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l-~~l~h~nIv~l~~~~~~----~~~~~ 583 (843)
++|.+. +.||+|+||.||+|.. .+++.||+|++... ..+.+|++++ +..+||||+++++++.. ....+
T Consensus 17 ~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-----~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 91 (299)
T 3m2w_A 17 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLL 91 (299)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred cchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEeccc-----HHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEE
Confidence 456666 7799999999999996 47899999998642 3567888887 55689999999999876 67889
Q ss_pred EEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcC---CCcEEEeeccccc
Q 003158 584 LVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDH---KFTAKVADFGLSR 660 (843)
Q Consensus 584 lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~---~~~~kl~DfGla~ 660 (843)
+||||+++|+|.+++.......+++..++.++.|++.||+|||+++ |+||||||+||+++. ++.+||+|||++.
T Consensus 92 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~ 168 (299)
T 3m2w_A 92 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGFAK 168 (299)
T ss_dssp EEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESSSSTTCCEEECCCTTCE
T ss_pred EEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEEecCCCCCcEEEecccccc
Confidence 9999999999999998876667999999999999999999999999 999999999999998 7899999999986
Q ss_pred cCCCCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchh
Q 003158 661 LAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFS 740 (843)
Q Consensus 661 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~ 740 (843)
... +..++.++|||||||++|||++|+.||........ . .....
T Consensus 169 ~~~-----------------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~------~-~~~~~ 212 (299)
T 3m2w_A 169 ETT-----------------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAI------S-PGMKT 212 (299)
T ss_dssp ECT-----------------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC--------------CCSCC
T ss_pred ccc-----------------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhh------h-HHHHH
Confidence 432 13467799999999999999999999975432110 0 00001
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCCCCccCCCC
Q 003158 741 VIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKH 820 (843)
Q Consensus 741 ~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~sa~e~L~H 820 (843)
.+.......+.... ...+..+.+++.+||..||++|||++|+|+|
T Consensus 213 ~~~~~~~~~~~~~~-----------------------------------~~~~~~~~~li~~~l~~dP~~Rps~~e~l~h 257 (299)
T 3m2w_A 213 RIRMGQYEFPNPEW-----------------------------------SEVSEEVKMLIRNLLKTEPTQRMTITEFMNH 257 (299)
T ss_dssp SSCTTCCSSCHHHH-----------------------------------TTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HHhhccccCCchhc-----------------------------------ccCCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 11111111121100 1112233467777888888888888888999
Q ss_pred CcccCCCC
Q 003158 821 PYVSSDVS 828 (843)
Q Consensus 821 p~f~~~~~ 828 (843)
|||.....
T Consensus 258 p~~~~~~~ 265 (299)
T 3m2w_A 258 PWIMQSTK 265 (299)
T ss_dssp HHHHTGGG
T ss_pred hhhccccc
Confidence 99876543
No 250
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00 E-value=6.2e-35 Score=348.93 Aligned_cols=239 Identities=21% Similarity=0.334 Sum_probs=194.4
Q ss_pred HcCCCCCCcccccCCeeEEEEEeC--CCcEEEEEEeccCC-hhhHHHHHHHHHHHHhccCCcccceeeeeecCCc-----
Q 003158 510 TNNFNSSTQIGQGGYGKVYKGILP--DGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGE----- 581 (843)
Q Consensus 510 ~~~~~~~~~lg~G~~g~Vy~~~~~--~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~----- 581 (843)
.++|++.+.||+|+||+||+|.+. +++.||||++.... ....+.+.+|++++++++||||+++++++.+.+.
T Consensus 79 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~ 158 (681)
T 2pzi_A 79 AGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPV 158 (681)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEE
T ss_pred CCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCce
Confidence 368999999999999999999975 68999999986533 3445678999999999999999999999987665
Q ss_pred EEEEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeecccccc
Q 003158 582 QMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRL 661 (843)
Q Consensus 582 ~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~ 661 (843)
.++||||+++++|.+++.. .+++..++.++.||++||.|||+++ ||||||||+|||++.+ .+||+|||+++.
T Consensus 159 ~~lv~E~~~g~~L~~~~~~----~l~~~~~~~~~~qi~~aL~~lH~~g---iiHrDlkp~NIll~~~-~~kl~DFG~a~~ 230 (681)
T 2pzi_A 159 GYIVMEYVGGQSLKRSKGQ----KLPVAEAIAYLLEILPALSYLHSIG---LVYNDLKPENIMLTEE-QLKLIDLGAVSR 230 (681)
T ss_dssp EEEEEECCCCEECC----C----CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECSS-CEEECCCTTCEE
T ss_pred eEEEEEeCCCCcHHHHHhC----CCCHHHHHHHHHHHHHHHHHHHHCC---CeecccChHHeEEeCC-cEEEEecccchh
Confidence 7999999999999988743 5899999999999999999999999 9999999999999986 899999999986
Q ss_pred CCCCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCCCCcchHHHHHHHhhcccchhh
Q 003158 662 APVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSV 741 (843)
Q Consensus 662 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~ 741 (843)
.... ....||+.|+|||++.+.. +.++|||||||++|||++|..||.....
T Consensus 231 ~~~~-----------~~~~gt~~y~aPE~~~~~~-~~~sDi~slG~~l~~l~~g~~~~~~~~~----------------- 281 (681)
T 2pzi_A 231 INSF-----------GYLYGTPGFQAPEIVRTGP-TVATDIYTVGRTLAALTLDLPTRNGRYV----------------- 281 (681)
T ss_dssp TTCC-----------SCCCCCTTTSCTTHHHHCS-CHHHHHHHHHHHHHHHHSCCCEETTEEC-----------------
T ss_pred cccC-----------CccCCCccccCHHHHcCCC-CCceehhhhHHHHHHHHhCCCCCccccc-----------------
Confidence 5321 3356999999999997764 8899999999999999999888753210
Q ss_pred ccCCCC-CCCHHHHHHHHHHHHHhcccCCCCCCC-HHHHHHHHHHhh
Q 003158 742 IDGNMG-SYPSECVEKFIKLALKCCQDETDARPS-MSEVMRELESIW 786 (843)
Q Consensus 742 ~~~~~~-~~~~~~~~~l~~l~~~c~~~~p~~RPs-~~~vl~~L~~~~ 786 (843)
+.... ......++.+.+++.+||+.+|.+||+ ++++.+.+..+.
T Consensus 282 -~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~ 327 (681)
T 2pzi_A 282 -DGLPEDDPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTGVL 327 (681)
T ss_dssp -SSCCTTCHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHH
T ss_pred -ccccccccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHHHH
Confidence 00001 111234577899999999999999995 566666666553
No 251
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=2.6e-33 Score=319.52 Aligned_cols=280 Identities=16% Similarity=0.206 Sum_probs=228.7
Q ss_pred CccccccCCccccCCCCCCEEEccCCcCCcc-CccccCCCCCCcEEEcccCcCCccCccccccCCCCCEEEccCCccccC
Q 003158 2 WNKISGSIPKEIGNIKSLELLLLNGNELTGS-LPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQ 80 (843)
Q Consensus 2 ~N~i~~~~p~~i~~l~~L~~L~L~~n~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 80 (843)
+|+|++..|..|.++++|++|+|++|.+.+. .+..|.++++|++|+|++|++++..|..|.++++|++|+|++|.+++.
T Consensus 39 ~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~ 118 (455)
T 3v47_A 39 LNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFLQLETGAFNGLANLEVLTLTQCNLDGA 118 (455)
T ss_dssp SSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTCTTCEECTTTTTTCTTCCEEECTTSCCBTH
T ss_pred CCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCCCccCccChhhccCcccCCEEeCCCCCCCcc
Confidence 6888888899999999999999999988744 467789999999999999999988888899999999999999999865
Q ss_pred CCcc--cCCCCCCceeeccCCCCCCCCCcc-cCCCCCCcEEEcCCCCCCCCCCCccccCC--------------------
Q 003158 81 IPPE--LSRLPSLVHMLLDNNNLTGYLPPE-LSELPKLLILQLDNNNFEGTTIPASYSNM-------------------- 137 (843)
Q Consensus 81 ~~~~--l~~l~~L~~L~L~~N~l~~~~~~~-~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l-------------------- 137 (843)
.+.. |..+++|++|+|++|++++..|.. +.++++|++|+|++|++.+ ..+..+..+
T Consensus 119 ~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~l~~l~~~~L~~L~l~~n~l~~~~~ 197 (455)
T 3v47_A 119 VLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKS-ICEEDLLNFQGKHFTLLRLSSITLQDMNE 197 (455)
T ss_dssp HHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBSC-CCTTTSGGGTTCEEEEEECTTCBCTTCST
T ss_pred ccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCcccc-cChhhhhccccccccccccccCcccccch
Confidence 5444 888999999999999998777765 7888999999999998875 334433222
Q ss_pred --------------C---------------------------------------------------------------CC
Q 003158 138 --------------S---------------------------------------------------------------KL 140 (843)
Q Consensus 138 --------------~---------------------------------------------------------------~L 140 (843)
+ +|
T Consensus 198 ~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L 277 (455)
T 3v47_A 198 YWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSSFGHTNFKDPDNFTFKGLEASGV 277 (455)
T ss_dssp TCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTCTTTSCCTTCCSSCCCCTTTTGGGTTSCC
T ss_pred hhccccccccccccceeeeEecCCCcccccchhhhhccccccceeeEeeccccccccccchhhhccCcccccccccccCc
Confidence 3 44
Q ss_pred cEEEcCCCCCCCCCC-CCCCCCCCCEEEcccCcCCCCCCCCCCC-cCcCEEEccCCcCCCCCCcccCCCCCCcEEeCcCc
Q 003158 141 LKLSLRNCSLQGPMP-DLSRIPNLGYLDLSSNQLNGSIPPGRLS-LNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANN 218 (843)
Q Consensus 141 ~~L~L~~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 218 (843)
+.|+|++|.+++.++ .+..+++|+.|+|++|++++..|..+.. .+|+.|+|++|.+++..|..|.++++|++|+|++|
T Consensus 278 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 357 (455)
T 3v47_A 278 KTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYN 357 (455)
T ss_dssp CEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEECCSS
T ss_pred eEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEECCCC
Confidence 455555555555445 4788899999999999999666655443 48999999999999888999999999999999999
Q ss_pred cCCCCCCchhhccccCCCCcceeEEcCCCCCCCCCCCC--cCCCCcEEEeccCcccccCC-cccccCCCCCC
Q 003158 219 SLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGSF--NIPPNVTVRLRGNPFCLNTN-AEQFCGSHSDD 287 (843)
Q Consensus 219 ~l~~~~p~~~~~l~~l~~~~L~~L~l~~N~l~~~~~~~--~~~~l~~l~l~~Np~~c~~~-~~~~~~~~~~~ 287 (843)
++++..|..+..+. +|+.|+|++|+|++++... .++.++.|++++|||.|+|. ..++..|+...
T Consensus 358 ~l~~~~~~~~~~l~-----~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~l~~~l~~~ 424 (455)
T 3v47_A 358 HIRALGDQSFLGLP-----NLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRIDYLSRWLNKN 424 (455)
T ss_dssp CCCEECTTTTTTCT-----TCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTTTHHHHHHHHHT
T ss_pred cccccChhhccccc-----cccEEECCCCccccCCHhHhccCCcccEEEccCCCcccCCCcchHHHHHHHhC
Confidence 99988888887654 5569999999999998754 78999999999999999998 56677777543
No 252
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=5e-33 Score=319.16 Aligned_cols=278 Identities=21% Similarity=0.220 Sum_probs=221.8
Q ss_pred CccccccCCccccCCCCCCEEEccCCcCCccCccccCCCCCCcEEEcccCcCCccCccccccCCCCCEEEccCCccccCC
Q 003158 2 WNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQI 81 (843)
Q Consensus 2 ~N~i~~~~p~~i~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 81 (843)
+|+|++..|..|.++++|++|+|++|.+++..|..|.++++|++|+|++|+++...+..|.++++|++|+|++|.+++..
T Consensus 41 ~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~ 120 (477)
T 2id5_A 41 KNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILL 120 (477)
T ss_dssp SSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCSCCTTSSTTCTTCCEEECTTSCCCEEC
T ss_pred CCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCCccCcccccCCCCCCEEECCCCccccCC
Confidence 68888888888999999999999999999888889999999999999999998666677888999999999999998888
Q ss_pred CcccCCCCCCceeeccCCCCCCCCCcccCCCCCCcEEEcCCCCCCCCCCCccccCCCCCcEEEcCCCCCCCCCC-CCCCC
Q 003158 82 PPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMP-DLSRI 160 (843)
Q Consensus 82 ~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~l 160 (843)
+..|.++++|+.|+|++|++++..+..|.++++|+.|+|++|++++ ..+..|.++++|+.|+|++|.++++++ .+..+
T Consensus 121 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~-~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l 199 (477)
T 2id5_A 121 DYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTS-IPTEALSHLHGLIVLRLRHLNINAIRDYSFKRL 199 (477)
T ss_dssp TTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSS-CCHHHHTTCTTCCEEEEESCCCCEECTTCSCSC
T ss_pred hhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcc-cChhHhcccCCCcEEeCCCCcCcEeChhhcccC
Confidence 8888889999999999999988888888889999999999998875 334567888888888888888887766 47777
Q ss_pred CCCCEEEcccCcCCCCCCCCCC-------------------------CcCcCEEEccCCcCCCCCCcccCCCCCCcEEeC
Q 003158 161 PNLGYLDLSSNQLNGSIPPGRL-------------------------SLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFI 215 (843)
Q Consensus 161 ~~L~~L~Ls~N~l~~~~p~~~~-------------------------~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 215 (843)
++|+.|++++|.+.+.++...+ ..+|+.|+|++|.+++..+..|.++++|+.|+|
T Consensus 200 ~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 279 (477)
T 2id5_A 200 YRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQL 279 (477)
T ss_dssp TTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCCSCCHHHHTTCTTCCEEECCSSCCCEECTTSCTTCTTCCEEEC
T ss_pred cccceeeCCCCccccccCcccccCccccEEECcCCcccccCHHHhcCccccCeeECCCCcCCccChhhccccccCCEEEC
Confidence 7666666666554444433221 125667777777776666666777777777777
Q ss_pred cCccCCCCCCchhhccccCCCCcceeEEcCCCCCCCCCCCC--cCCCCcEEEeccCcccccCCcccccCCCC
Q 003158 216 ANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGSF--NIPPNVTVRLRGNPFCLNTNAEQFCGSHS 285 (843)
Q Consensus 216 ~~N~l~~~~p~~~~~l~~l~~~~L~~L~l~~N~l~~~~~~~--~~~~l~~l~l~~Np~~c~~~~~~~~~~~~ 285 (843)
++|++++..|..|..+ ++|+.|+|++|+|+.++... .++.++.|++++|||.|+|.+.|+..|..
T Consensus 280 ~~n~l~~~~~~~~~~l-----~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~c~c~~~~~~~~~~ 346 (477)
T 2id5_A 280 VGGQLAVVEPYAFRGL-----NYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSNPLACDCRLLWVFRRRW 346 (477)
T ss_dssp CSSCCSEECTTTBTTC-----TTCCEEECCSSCCSCCCGGGBSCGGGCCEEECCSSCEECSGGGHHHHTTTT
T ss_pred CCCccceECHHHhcCc-----ccCCEEECCCCcCceeCHhHcCCCcccCEEEccCCCccCccchHhHHhhhh
Confidence 7777776666666554 45669999999999998764 68999999999999999999998877653
No 253
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=8.7e-33 Score=335.25 Aligned_cols=267 Identities=32% Similarity=0.516 Sum_probs=233.3
Q ss_pred CccccccCCccccC--CCCCCEEEccCCcCCccCccccCCCCCCcEEEcccCcCCccCccccccCCCCCEEEccCCcccc
Q 003158 2 WNKISGSIPKEIGN--IKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISG 79 (843)
Q Consensus 2 ~N~i~~~~p~~i~~--l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 79 (843)
+|+++|.+|..+.. +++|++|+|++|++++.+|..|+++++|++|+|++|++++.+|..|.++++|+.|+|++|.+++
T Consensus 377 ~N~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~ 456 (768)
T 3rgz_A 377 SNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEG 456 (768)
T ss_dssp SSEEEEECCTTTTCSTTCCCCEEECCSSEEEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCCS
T ss_pred CCCcCCCcChhhhhcccCCccEEECCCCccccccCHHHhcCCCCCEEECcCCcccCcccHHHhcCCCCCEEECCCCcccC
Confidence 68888888888877 7889999999999998999999999999999999999998999999999999999999999998
Q ss_pred CCCcccCCCCCCceeeccCCCCCCCCCcccCCCCCCcEEEcCCCCCCCCCCCccccCCCCCcEEEcCCCCCCCCCC-CCC
Q 003158 80 QIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMP-DLS 158 (843)
Q Consensus 80 ~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~ 158 (843)
.+|..+..+++|+.|+|++|++++.+|..+.++++|++|+|++|++++ .+|..++++++|+.|+|++|++++..| .+.
T Consensus 457 ~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~ 535 (768)
T 3rgz_A 457 EIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTG-EIPKWIGRLENLAILKLSNNSFSGNIPAELG 535 (768)
T ss_dssp CCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCS-CCCGGGGGCTTCCEEECCSSCCEEECCGGGG
T ss_pred cCCHHHcCCCCceEEEecCCcccCcCCHHHhcCCCCCEEEccCCccCC-cCChHHhcCCCCCEEECCCCcccCcCCHHHc
Confidence 899999999999999999999998899999999999999999999986 678899999999999999999987665 588
Q ss_pred CCCCCCEEEcccCcCCCCCCCCCCC-------------------------------------------------------
Q 003158 159 RIPNLGYLDLSSNQLNGSIPPGRLS------------------------------------------------------- 183 (843)
Q Consensus 159 ~l~~L~~L~Ls~N~l~~~~p~~~~~------------------------------------------------------- 183 (843)
.+++|+.|+|++|+++|.+|...+.
T Consensus 536 ~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l 615 (768)
T 3rgz_A 536 DCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNI 615 (768)
T ss_dssp GCTTCCEEECCSSEEESBCCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCT
T ss_pred CCCCCCEEECCCCccCCcCChHHhcccchhhhhccccccccccccccccccccccccccccccccchhhhcccccccccc
Confidence 8999999999999998877754221
Q ss_pred ----------------cCcCEEEccCCcCCCCCCcccCCCCCCcEEeCcCccCCCCCCchhhccccCCCCcceeEEcCCC
Q 003158 184 ----------------LNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNN 247 (843)
Q Consensus 184 ----------------~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~l~~~~L~~L~l~~N 247 (843)
.+|+.|||++|+++|.+|..|+++++|+.|+|++|+|+|.+|..+..+.+| +.|||++|
T Consensus 616 ~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L-----~~LdLs~N 690 (768)
T 3rgz_A 616 TSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGL-----NILDLSSN 690 (768)
T ss_dssp TSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTC-----CEEECCSS
T ss_pred ccceecccCchhhhccccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCC-----CEEECCCC
Confidence 258889999999999999999999999999999999999999998877655 48999999
Q ss_pred CCCCC-CCCC-cCCCCcEEEeccCccccc
Q 003158 248 NLTNI-SGSF-NIPPNVTVRLRGNPFCLN 274 (843)
Q Consensus 248 ~l~~~-~~~~-~~~~l~~l~l~~Np~~c~ 274 (843)
+|++. |..+ .++.++.|++++|++...
T Consensus 691 ~l~g~ip~~l~~l~~L~~L~ls~N~l~g~ 719 (768)
T 3rgz_A 691 KLDGRIPQAMSALTMLTEIDLSNNNLSGP 719 (768)
T ss_dssp CCEECCCGGGGGCCCCSEEECCSSEEEEE
T ss_pred cccCcCChHHhCCCCCCEEECcCCccccc
Confidence 99954 4444 788999999999988643
No 254
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.98 E-value=3.6e-32 Score=329.79 Aligned_cols=266 Identities=30% Similarity=0.487 Sum_probs=161.3
Q ss_pred CccccccCCccccCCCCCCEEEccCCcCCccCccccCCCCCCcEEEcccCcCCccCccccccCCCCCEEEccCCccccCC
Q 003158 2 WNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQI 81 (843)
Q Consensus 2 ~N~i~~~~p~~i~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 81 (843)
+|++++.+|..|.++++|++|+|++|++++.+|..|+++++|++|+|++|.+++.+|..+..+++|++|+|++|++++.+
T Consensus 403 ~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 482 (768)
T 3rgz_A 403 NNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEI 482 (768)
T ss_dssp SSEEEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCC
T ss_pred CCccccccCHHHhcCCCCCEEECcCCcccCcccHHHhcCCCCCEEECCCCcccCcCCHHHcCCCCceEEEecCCcccCcC
Confidence 45666666666666666666666666666666666666666666666666666666666666666666666666666666
Q ss_pred CcccCCCCCCceeeccCCCCCCCCCcccCCCCCCcEEEcCCCCCCCCCCCccccCCCCCcEEEcCCCCCCCCCC------
Q 003158 82 PPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMP------ 155 (843)
Q Consensus 82 ~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~------ 155 (843)
|..+.++++|++|+|++|++++.+|.++..+++|++|+|++|++++ .+|..+.++++|+.|+|++|.+++..|
T Consensus 483 p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~ 561 (768)
T 3rgz_A 483 PSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSG-NIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQ 561 (768)
T ss_dssp CGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEE-ECCGGGGGCTTCCEEECCSSEEESBCCGGGGTT
T ss_pred CHHHhcCCCCCEEEccCCccCCcCChHHhcCCCCCEEECCCCcccC-cCCHHHcCCCCCCEEECCCCccCCcCChHHhcc
Confidence 6666666666666666666666666666666666666666666654 456666666666666666666553222
Q ss_pred -----------------------------------------------------------------CCCCCCCCCEEEccc
Q 003158 156 -----------------------------------------------------------------DLSRIPNLGYLDLSS 170 (843)
Q Consensus 156 -----------------------------------------------------------------~~~~l~~L~~L~Ls~ 170 (843)
.+..+++|+.|||++
T Consensus 562 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~ 641 (768)
T 3rgz_A 562 SGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSY 641 (768)
T ss_dssp TTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEECCS
T ss_pred cchhhhhccccccccccccccccccccccccccccccccchhhhccccccccccccceecccCchhhhccccccEEECcC
Confidence 122345566666666
Q ss_pred CcCCCCCCCCCCCc-CcCEEEccCCcCCCCCCcccCCCCCCcEEeCcCccCCCCCCchhhccccCCCCcceeEEcCCCCC
Q 003158 171 NQLNGSIPPGRLSL-NITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNL 249 (843)
Q Consensus 171 N~l~~~~p~~~~~~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~l~~~~L~~L~l~~N~l 249 (843)
|+++|.+|..+... +|+.|+|++|.++|.+|..|+++++|+.|||++|+++|.+|..+..+..| +.|||++|+|
T Consensus 642 N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L-----~~L~ls~N~l 716 (768)
T 3rgz_A 642 NMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTML-----TEIDLSNNNL 716 (768)
T ss_dssp SCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCC-----SEEECCSSEE
T ss_pred CcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCC-----CEEECcCCcc
Confidence 66666666554432 56666666666666666666666666666666666666666666554433 3566666666
Q ss_pred CCCCCCC-cCCCCcEEEeccCcccc
Q 003158 250 TNISGSF-NIPPNVTVRLRGNPFCL 273 (843)
Q Consensus 250 ~~~~~~~-~~~~l~~l~l~~Np~~c 273 (843)
++..+.. .+..+....+.|||.-|
T Consensus 717 ~g~iP~~~~~~~~~~~~~~gN~~Lc 741 (768)
T 3rgz_A 717 SGPIPEMGQFETFPPAKFLNNPGLC 741 (768)
T ss_dssp EEECCSSSSGGGSCGGGGCSCTEEE
T ss_pred cccCCCchhhccCCHHHhcCCchhc
Confidence 5433322 33333344455666544
No 255
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.98 E-value=3.9e-31 Score=300.01 Aligned_cols=260 Identities=21% Similarity=0.273 Sum_probs=230.6
Q ss_pred CCCCEEEccCCcCCccCccccCCCCCCcEEEcccCcCCccCccccccCCCCCEEEccCCccccCCCcccCCCCCCceeec
Q 003158 17 KSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLL 96 (843)
Q Consensus 17 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L 96 (843)
.+.+.++.++++++ .+|..+. ++|+.|+|++|+|++..+..|.++++|+.|+|++|.|+.+.+..|.++++|++|+|
T Consensus 43 ~~~~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L 119 (440)
T 3zyj_A 43 NQFSKVICVRKNLR-EVPDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLEL 119 (440)
T ss_dssp TTSCEEECCSCCCS-SCCSCCC--TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEEC
T ss_pred CCCCEEEeCCCCcC-cCCCCCC--CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEEC
Confidence 35678999999999 7777665 78999999999999888899999999999999999999888889999999999999
Q ss_pred cCCCCCCCCCcccCCCCCCcEEEcCCCCCCCCCCCccccCCCCCcEEEcCC-CCCCCCCC-CCCCCCCCCEEEcccCcCC
Q 003158 97 DNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRN-CSLQGPMP-DLSRIPNLGYLDLSSNQLN 174 (843)
Q Consensus 97 ~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~-N~l~~~~~-~~~~l~~L~~L~Ls~N~l~ 174 (843)
++|+|+...+..|..+++|++|+|++|++.. ..+..|.++++|+.|+|++ |.+..+++ .|..+++|+.|+|++|+++
T Consensus 120 ~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~-~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~ 198 (440)
T 3zyj_A 120 FDNRLTTIPNGAFVYLSKLKELWLRNNPIES-IPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLR 198 (440)
T ss_dssp CSSCCSSCCTTTSCSCSSCCEEECCSCCCCE-ECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCS
T ss_pred CCCcCCeeCHhHhhccccCceeeCCCCcccc-cCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCc
Confidence 9999997777789999999999999999975 3456889999999999999 55666666 4899999999999999998
Q ss_pred CCCCCCCCCcCcCEEEccCCcCCCCCCcccCCCCCCcEEeCcCccCCCCCCchhhccccCCCCcceeEEcCCCCCCCCCC
Q 003158 175 GSIPPGRLSLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISG 254 (843)
Q Consensus 175 ~~~p~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~l~~~~L~~L~l~~N~l~~~~~ 254 (843)
.+|......+|+.|+|++|.|++..|..|.++++|+.|+|++|+|++..+..|..+. +|+.|+|++|+|+.++.
T Consensus 199 -~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~-----~L~~L~L~~N~l~~~~~ 272 (440)
T 3zyj_A 199 -EIPNLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQ-----SLVEINLAHNNLTLLPH 272 (440)
T ss_dssp -SCCCCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCT-----TCCEEECTTSCCCCCCT
T ss_pred -cccccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCC-----CCCEEECCCCCCCccCh
Confidence 777655556999999999999999999999999999999999999988888877654 45689999999999987
Q ss_pred CC--cCCCCcEEEeccCcccccCCcccccCCCCC
Q 003158 255 SF--NIPPNVTVRLRGNPFCLNTNAEQFCGSHSD 286 (843)
Q Consensus 255 ~~--~~~~l~~l~l~~Np~~c~~~~~~~~~~~~~ 286 (843)
.. .++.++.|+|++|||.|||.+.|+..|+..
T Consensus 273 ~~~~~l~~L~~L~L~~Np~~CdC~l~~l~~~~~~ 306 (440)
T 3zyj_A 273 DLFTPLHHLERIHLHHNPWNCNCDILWLSWWIKD 306 (440)
T ss_dssp TTTSSCTTCCEEECCSSCEECSSTTHHHHHHHHT
T ss_pred hHhccccCCCEEEcCCCCccCCCCchHHHHHHHh
Confidence 65 789999999999999999999999888764
No 256
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.97 E-value=3.4e-31 Score=301.54 Aligned_cols=259 Identities=20% Similarity=0.268 Sum_probs=231.0
Q ss_pred CCCEEEccCCcCCccCccccCCCCCCcEEEcccCcCCccCccccccCCCCCEEEccCCccccCCCcccCCCCCCceeecc
Q 003158 18 SLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLD 97 (843)
Q Consensus 18 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~ 97 (843)
+...++.++++++ .+|..+. ++|++|+|++|+|++..+..|.++++|+.|+|++|.|+++.+..|.++++|++|+|+
T Consensus 55 ~~~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~ 131 (452)
T 3zyi_A 55 QFSKVVCTRRGLS-EVPQGIP--SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELF 131 (452)
T ss_dssp SSCEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECC
T ss_pred CCcEEEECCCCcC-ccCCCCC--CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECC
Confidence 4678999999999 6776655 789999999999998889999999999999999999998888999999999999999
Q ss_pred CCCCCCCCCcccCCCCCCcEEEcCCCCCCCCCCCccccCCCCCcEEEcCC-CCCCCCCCC-CCCCCCCCEEEcccCcCCC
Q 003158 98 NNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRN-CSLQGPMPD-LSRIPNLGYLDLSSNQLNG 175 (843)
Q Consensus 98 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~-N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~ 175 (843)
+|+|+...+..|..+++|++|+|++|++.. ..+..|.++++|+.|+|++ |.++.+++. |..+++|+.|+|++|+++
T Consensus 132 ~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~-~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~- 209 (452)
T 3zyi_A 132 DNWLTVIPSGAFEYLSKLRELWLRNNPIES-IPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIK- 209 (452)
T ss_dssp SSCCSBCCTTTSSSCTTCCEEECCSCCCCE-ECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCS-
T ss_pred CCcCCccChhhhcccCCCCEEECCCCCcce-eCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCccc-
Confidence 999998777889999999999999999975 3456899999999999999 566766664 899999999999999999
Q ss_pred CCCCCCCCcCcCEEEccCCcCCCCCCcccCCCCCCcEEeCcCccCCCCCCchhhccccCCCCcceeEEcCCCCCCCCCCC
Q 003158 176 SIPPGRLSLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGS 255 (843)
Q Consensus 176 ~~p~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~l~~~~L~~L~l~~N~l~~~~~~ 255 (843)
.+|......+|+.|+|++|.|++..|..|.++++|+.|+|++|+|++..|..|..+. +|+.|+|++|+|++++..
T Consensus 210 ~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~-----~L~~L~L~~N~l~~~~~~ 284 (452)
T 3zyi_A 210 DMPNLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLA-----SLVELNLAHNNLSSLPHD 284 (452)
T ss_dssp SCCCCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCT-----TCCEEECCSSCCSCCCTT
T ss_pred ccccccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCC-----CCCEEECCCCcCCccChH
Confidence 567655556999999999999999999999999999999999999988888887654 456999999999999876
Q ss_pred C--cCCCCcEEEeccCcccccCCcccccCCCCC
Q 003158 256 F--NIPPNVTVRLRGNPFCLNTNAEQFCGSHSD 286 (843)
Q Consensus 256 ~--~~~~l~~l~l~~Np~~c~~~~~~~~~~~~~ 286 (843)
. .+++++.|+|++|||.|+|.+.|+..|+..
T Consensus 285 ~~~~l~~L~~L~L~~Np~~CdC~~~~l~~~l~~ 317 (452)
T 3zyi_A 285 LFTPLRYLVELHLHHNPWNCDCDILWLAWWLRE 317 (452)
T ss_dssp SSTTCTTCCEEECCSSCEECSTTTHHHHHHHHH
T ss_pred HhccccCCCEEEccCCCcCCCCCchHHHHHHHH
Confidence 5 689999999999999999999999888753
No 257
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.97 E-value=1.8e-32 Score=296.08 Aligned_cols=252 Identities=28% Similarity=0.423 Sum_probs=220.6
Q ss_pred CCCCEEEccCCcCCc--cCccccCCCCCCcEEEccc-CcCCccCccccccCCCCCEEEccCCccccCCCcccCCCCCCce
Q 003158 17 KSLELLLLNGNELTG--SLPEELGYLPKLDRIQIDQ-NYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVH 93 (843)
Q Consensus 17 ~~L~~L~L~~n~l~~--~~p~~~~~l~~L~~L~L~~-N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~ 93 (843)
.+++.|+|++|++++ .+|..|+++++|++|+|++ |.+.+.+|..|.++++|++|+|++|.+++.+|..|.++++|++
T Consensus 50 ~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~ 129 (313)
T 1ogq_A 50 YRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVT 129 (313)
T ss_dssp CCEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCE
T ss_pred ceEEEEECCCCCccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCE
Confidence 579999999999998 8999999999999999995 9999899999999999999999999999899999999999999
Q ss_pred eeccCCCCCCCCCcccCCCCCCcEEEcCCCCCCCCCCCccccCCC-CCcEEEcCCCCCCCCCC-CCCCCCCCCEEEcccC
Q 003158 94 MLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMS-KLLKLSLRNCSLQGPMP-DLSRIPNLGYLDLSSN 171 (843)
Q Consensus 94 L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~-~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~Ls~N 171 (843)
|+|++|++++.+|..+..+++|++|+|++|++++ .+|..+..++ +|+.|+|++|++++..+ .+..+. |+.|+|++|
T Consensus 130 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N 207 (313)
T 1ogq_A 130 LDFSYNALSGTLPPSISSLPNLVGITFDGNRISG-AIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRN 207 (313)
T ss_dssp EECCSSEEESCCCGGGGGCTTCCEEECCSSCCEE-ECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSS
T ss_pred EeCCCCccCCcCChHHhcCCCCCeEECcCCcccC-cCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCC
Confidence 9999999998899999999999999999999976 6788999988 99999999999986555 577776 999999999
Q ss_pred cCCCCCCCCCCC-cCcCEEEccCCcCCCCCCcccCCCCCCcEEeCcCccCCCCCCchhhccccCCCCcceeEEcCCCCCC
Q 003158 172 QLNGSIPPGRLS-LNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLT 250 (843)
Q Consensus 172 ~l~~~~p~~~~~-~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~l~~~~L~~L~l~~N~l~ 250 (843)
.+++.+|..+.. .+|+.|+|++|.+++.+|. +..+++|++|+|++|+|++.+|..+..+.+ |+.|+|++|+|+
T Consensus 208 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~-----L~~L~Ls~N~l~ 281 (313)
T 1ogq_A 208 MLEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKF-----LHSLNVSFNNLC 281 (313)
T ss_dssp EEEECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGGGGGCTT-----CCEEECCSSEEE
T ss_pred cccCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCChHHhcCcC-----CCEEECcCCccc
Confidence 998777665444 4899999999999977665 888999999999999999999998877654 558999999998
Q ss_pred C-CCCCCcCCCCcEEEeccCcccccCC
Q 003158 251 N-ISGSFNIPPNVTVRLRGNPFCLNTN 276 (843)
Q Consensus 251 ~-~~~~~~~~~l~~l~l~~Np~~c~~~ 276 (843)
+ +|....++.+..+++.+||+.|+..
T Consensus 282 ~~ip~~~~l~~L~~l~l~~N~~lc~~p 308 (313)
T 1ogq_A 282 GEIPQGGNLQRFDVSAYANNKCLCGSP 308 (313)
T ss_dssp EECCCSTTGGGSCGGGTCSSSEEESTT
T ss_pred ccCCCCccccccChHHhcCCCCccCCC
Confidence 4 4544578899999999999887643
No 258
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.97 E-value=7.6e-32 Score=318.93 Aligned_cols=280 Identities=19% Similarity=0.237 Sum_probs=194.9
Q ss_pred CccccccCCccccCCCCCCEEEccCCcCCccCccccCCCCCCcEEEcccCcCCccCccc---------------------
Q 003158 2 WNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKS--------------------- 60 (843)
Q Consensus 2 ~N~i~~~~p~~i~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~--------------------- 60 (843)
+|++++..+..|.++++|++|+|++|+++ .+|..+.++++|++|+|++|.+++..|..
T Consensus 263 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~ 341 (606)
T 3t6q_A 263 KHYFFNISSNTFHCFSGLQELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLEL 341 (606)
T ss_dssp TCCCSSCCTTTTTTCTTCSEEECTTSCCS-CCCSSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTCSEEECCSCSSCCBC
T ss_pred cCccCccCHHHhccccCCCEEeccCCccC-CCChhhcccccCCEEECccCCcCcCchhhhhccCcCCEEECCCCCccccc
Confidence 34555555555555555555555555555 45555555555555555555555444444
Q ss_pred ----cccCCCCCEEEccCCccccCC--CcccCCCCCCceeeccCCCCCCCCCcccCCCCCCcEEEcCCCCCCCCCCCccc
Q 003158 61 ----FANLNKTRHFHMNNNSISGQI--PPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASY 134 (843)
Q Consensus 61 ----~~~l~~L~~L~Ls~N~l~~~~--~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 134 (843)
+..+++|++|++++|.+++.. +..+..+++|++|+|++|++++..+..|..+++|++|+|++|++.+...+..+
T Consensus 342 ~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~ 421 (606)
T 3t6q_A 342 GTGCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPF 421 (606)
T ss_dssp CSSTTTTCTTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEECCTTCCTT
T ss_pred chhhhhccCcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCCcccchhh
Confidence 445555555555555555433 44556666666666666666666666677777777777777777653333447
Q ss_pred cCCCCCcEEEcCCCCCCCCCCC-CCCCCCCCEEEcccCcCCCC-CCC--CCC-CcCcCEEEccCCcCCCCCCcccCCCCC
Q 003158 135 SNMSKLLKLSLRNCSLQGPMPD-LSRIPNLGYLDLSSNQLNGS-IPP--GRL-SLNITTIKLSNNKLTGTIPSNFSGLPR 209 (843)
Q Consensus 135 ~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~-~p~--~~~-~~~L~~L~Ls~N~l~~~~p~~~~~l~~ 209 (843)
.++++|+.|+|++|.+++.++. +..+++|+.|+|++|.+++. ++. ... ..+|+.|+|++|.+++..|..|.++++
T Consensus 422 ~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~ 501 (606)
T 3t6q_A 422 QNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKM 501 (606)
T ss_dssp TTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCTT
T ss_pred hCcccCCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCccEEECCCCccCccChhhhccccC
Confidence 7777778888888777776663 77788888888888887652 221 122 237899999999999888889999999
Q ss_pred CcEEeCcCccCCCCCCchhhccccCCCCcceeEEcCCCCCCCCCCCC--cCCCCcEEEeccCcccccCCcccccCCCCCC
Q 003158 210 LQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGSF--NIPPNVTVRLRGNPFCLNTNAEQFCGSHSDD 287 (843)
Q Consensus 210 L~~L~L~~N~l~~~~p~~~~~l~~l~~~~L~~L~l~~N~l~~~~~~~--~~~~l~~l~l~~Np~~c~~~~~~~~~~~~~~ 287 (843)
|++|+|++|++++..|..+..+. .| .|+|++|+++++++.. .++.++.|++++|||.|+|...+|..|+...
T Consensus 502 L~~L~Ls~N~l~~~~~~~l~~l~-----~L-~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~~~~~~~w~~~~ 575 (606)
T 3t6q_A 502 MNHVDLSHNRLTSSSIEALSHLK-----GI-YLNLASNHISIILPSLLPILSQQRTINLRQNPLDCTCSNIYFLEWYKEN 575 (606)
T ss_dssp CCEEECCSSCCCGGGGGGGTTCC-----SC-EEECCSSCCCCCCGGGHHHHHTSSEEECTTCCEECSGGGHHHHHHHHHC
T ss_pred CCEEECCCCccCcCChhHhCccc-----cc-EEECcCCcccccCHhhcccCCCCCEEeCCCCCccccCCcHHHHHHHHhC
Confidence 99999999999988888876554 45 7999999999988764 6899999999999999999999999998754
Q ss_pred C
Q 003158 288 D 288 (843)
Q Consensus 288 ~ 288 (843)
.
T Consensus 576 ~ 576 (606)
T 3t6q_A 576 M 576 (606)
T ss_dssp G
T ss_pred c
Confidence 3
No 259
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.97 E-value=3.6e-31 Score=314.64 Aligned_cols=295 Identities=17% Similarity=0.206 Sum_probs=229.2
Q ss_pred CCccccccCCccccCCCCCCEEEccCCcCCccCccccCCCCCCcEEEcccCcCCccCccccccCCCCCEEEccCCccccC
Q 003158 1 MWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQ 80 (843)
Q Consensus 1 ~~N~i~~~~p~~i~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 80 (843)
.+|+|++..|.+|.++++|++|+|++|+|+++.+.+|++|++|++|+|++|+|++..+..|.++++|++|+|++|+|+++
T Consensus 60 s~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls~N~l~~l 139 (635)
T 4g8a_A 60 SFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASL 139 (635)
T ss_dssp TTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEECTTSCCCCS
T ss_pred eCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEECCCCcCCCC
Confidence 37999988888999999999999999999988888999999999999999999987778899999999999999999987
Q ss_pred CCcccCCCCCCceeeccCCCCCCC-CCcccCCCCCCcEEEcCCCCCCCCCCCcc--------------------------
Q 003158 81 IPPELSRLPSLVHMLLDNNNLTGY-LPPELSELPKLLILQLDNNNFEGTTIPAS-------------------------- 133 (843)
Q Consensus 81 ~~~~l~~l~~L~~L~L~~N~l~~~-~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~-------------------------- 133 (843)
.+..|+++++|++|+|++|+++.. .|..+..+++|++|+|++|++++. .+..
T Consensus 140 ~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~-~~~~l~~L~~l~~~~~~~~ls~n~l~~i~~ 218 (635)
T 4g8a_A 140 ENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSI-YCTDLRVLHQMPLLNLSLDLSLNPMNFIQP 218 (635)
T ss_dssp TTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEE-CGGGGHHHHTCTTCCCEEECTTCCCCEECT
T ss_pred ChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCcccccc-ccccccchhhhhhhhhhhhcccCcccccCc
Confidence 777899999999999999999854 577888899999999998877531 0000
Q ss_pred --------------------------------------------------------------------------------
Q 003158 134 -------------------------------------------------------------------------------- 133 (843)
Q Consensus 134 -------------------------------------------------------------------------------- 133 (843)
T Consensus 219 ~~~~~~~~~~l~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~ 298 (635)
T 4g8a_A 219 GAFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDGI 298 (635)
T ss_dssp TTTTTCEEEEEEEESCCSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTTTTGGGGGSEEEEEEEECCCSCEEEC
T ss_pred ccccchhhhhhhhhcccccccccchhhcCCcccccccccccccccccccccccccccccccchhhhhhhhhhhcccccch
Confidence
Q ss_pred --------------------------------------------------------------------ccCCCCCcEEEc
Q 003158 134 --------------------------------------------------------------------YSNMSKLLKLSL 145 (843)
Q Consensus 134 --------------------------------------------------------------------~~~l~~L~~L~L 145 (843)
...+++|+.|++
T Consensus 299 ~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~L~~l~l~~n~~~~~~~~~~l~~L~~L~l 378 (635)
T 4g8a_A 299 IDLFNCLTNVSSFSLVSVTIERVKDFSYNFGWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFSEVDLPSLEFLDL 378 (635)
T ss_dssp TTTTGGGTTCSEEEEESCEEEECGGGGSCCCCSEEEEESCEESSCCCCBCTTCCEEEEESCCSCCBCCCCBCTTCCEEEC
T ss_pred hhhhhhhcccccccccccccccccccccchhhhhhhcccccccCcCcccchhhhhcccccccCCCCcccccccccccchh
Confidence 001344555555
Q ss_pred CCCCCCC-------------------------------------------------------------------------
Q 003158 146 RNCSLQG------------------------------------------------------------------------- 152 (843)
Q Consensus 146 ~~N~l~~------------------------------------------------------------------------- 152 (843)
++|.+..
T Consensus 379 s~n~l~~~~~~~~~~~~~~~L~~L~~~~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~~~~~~~l~~l~~l~ls~n~l~ 458 (635)
T 4g8a_A 379 SRNGLSFKGCCSQSDFGTISLKYLDLSFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTR 458 (635)
T ss_dssp CSSCCBEEEECCHHHHSCSCCCEEECCSCSEEEECSCCTTCTTCCEEECTTSEEESTTSSCTTTTCTTCCEEECTTSCCE
T ss_pred hccccccccccccchhhhhhhhhhhccccccccccccccccccccchhhhhccccccccccccccccccccccccccccc
Confidence 5554421
Q ss_pred -CCC-CCCCCCCCCEEEcccCcCCCC-CCCCCCC-cCcCEEEccCCcCCCCCCcccCCCCCCcEEeCcCccCCCCCCchh
Q 003158 153 -PMP-DLSRIPNLGYLDLSSNQLNGS-IPPGRLS-LNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSI 228 (843)
Q Consensus 153 -~~~-~~~~l~~L~~L~Ls~N~l~~~-~p~~~~~-~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~ 228 (843)
..+ .+..+++|+.|+|++|++.+. +|..+.. .+|+.|+|++|+|++..|..|.++++|++|+|++|+|++..|..|
T Consensus 459 ~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~ 538 (635)
T 4g8a_A 459 VAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPY 538 (635)
T ss_dssp ECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCBCCCGGG
T ss_pred cccccccccchhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCCCEEECCCCcCCCCChhHH
Confidence 111 122334455555555543322 3333222 389999999999999999999999999999999999998888888
Q ss_pred hccccCCCCcceeEEcCCCCCCCCCCCC--cC-CCCcEEEeccCcccccCCcccccCCCCCCCcccccCCCCCCCcCC
Q 003158 229 WQSRTLNATETFILDFQNNNLTNISGSF--NI-PPNVTVRLRGNPFCLNTNAEQFCGSHSDDDNEIDRSTNSTLDCRA 303 (843)
Q Consensus 229 ~~l~~l~~~~L~~L~l~~N~l~~~~~~~--~~-~~l~~l~l~~Np~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~ 303 (843)
..+. +|++|||++|+|+++++.. .+ +.++.|++++|||.|||.+.||..|+......+. ....+.|..
T Consensus 539 ~~l~-----~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C~C~~~~~~~wl~~~~~~~~--~~~~~~C~~ 609 (635)
T 4g8a_A 539 KCLN-----SLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCEHQSFLQWIKDQRQLLV--EVERMECAT 609 (635)
T ss_dssp TTCT-----TCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCCSGGGHHHHHHHHHTTTTBS--CGGGCBBCS
T ss_pred hCCC-----CCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCcccCCcHHHHHHHHhCCCccC--CCCCceeCC
Confidence 7655 4569999999999998764 55 5799999999999999999999999875543332 233466765
No 260
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.97 E-value=6.3e-31 Score=311.10 Aligned_cols=161 Identities=19% Similarity=0.195 Sum_probs=105.9
Q ss_pred CCCCCcEEEcCCCCCCCCCC-CCCCCCCCCEEEcccCcCCCC-CCCCCCC-cCcCEEEccCCcCCCCCCcccCCCCCCcE
Q 003158 136 NMSKLLKLSLRNCSLQGPMP-DLSRIPNLGYLDLSSNQLNGS-IPPGRLS-LNITTIKLSNNKLTGTIPSNFSGLPRLQR 212 (843)
Q Consensus 136 ~l~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~~-~p~~~~~-~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 212 (843)
++++|+.|++++|.+++..+ .+..+++|+.|++++|.+++. +|..+.. .+|+.|+|++|.+++..|..|.++++|++
T Consensus 422 ~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~ 501 (606)
T 3vq2_A 422 SLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQL 501 (606)
T ss_dssp TCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCE
T ss_pred ccccCCEEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCE
Confidence 33334444444444433333 244445555555555555432 3333222 36777777777777777777777888888
Q ss_pred EeCcCccCCCCCCchhhccccCCCCcceeEEcCCCCCCCCCCCC-cCC-CCcEEEeccCcccccCCcccccCCCCCCCcc
Q 003158 213 LFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGSF-NIP-PNVTVRLRGNPFCLNTNAEQFCGSHSDDDNE 290 (843)
Q Consensus 213 L~L~~N~l~~~~p~~~~~l~~l~~~~L~~L~l~~N~l~~~~~~~-~~~-~l~~l~l~~Np~~c~~~~~~~~~~~~~~~~~ 290 (843)
|+|++|++++..|..+..+. +|+.|+|++|+|+.+|..+ .++ .++.|++.+|||.|+|.+.++..|+......
T Consensus 502 L~Ls~N~l~~~~~~~~~~l~-----~L~~L~l~~N~l~~~p~~~~~l~~~L~~l~l~~N~~~c~c~~~~~~~~l~~~~~~ 576 (606)
T 3vq2_A 502 LNMSHNNLLFLDSSHYNQLY-----SLSTLDCSFNRIETSKGILQHFPKSLAFFNLTNNSVACICEHQKFLQWVKEQKQF 576 (606)
T ss_dssp EECCSSCCSCEEGGGTTTCT-----TCCEEECTTSCCCCEESCGGGSCTTCCEEECCSCCCCCSSTTHHHHTTTTTSSSS
T ss_pred EECCCCcCCCcCHHHccCCC-----cCCEEECCCCcCcccCHhHhhhcccCcEEEccCCCcccCCccHHHHHHHHcCccc
Confidence 88888888777777776544 5669999999999998876 676 5999999999999999999999999764332
Q ss_pred cccCCCCCCCcCC
Q 003158 291 IDRSTNSTLDCRA 303 (843)
Q Consensus 291 ~~~~~~~~~~c~~ 303 (843)
+. ....+.|..
T Consensus 577 ~~--~~~~~~C~~ 587 (606)
T 3vq2_A 577 LV--NVEQMTCAT 587 (606)
T ss_dssp BS--SGGGCCCC-
T ss_pred cc--CCccceeCC
Confidence 22 233455543
No 261
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.97 E-value=2.9e-30 Score=302.34 Aligned_cols=273 Identities=20% Similarity=0.268 Sum_probs=173.7
Q ss_pred CccccccCCccccCCCCCCEEEccCCcCCccCccccCCCCCCcEEEcccCcCCccCccccccCCCCCEEEccCCccccC-
Q 003158 2 WNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQ- 80 (843)
Q Consensus 2 ~N~i~~~~p~~i~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~- 80 (843)
+|+|++..|.+|.++++|++|+|++|+|++..|+.|+++++|++|+|++|+|+ .+|.. .+++|++|+|++|++++.
T Consensus 61 ~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~Ls~N~l~~l~ 137 (562)
T 3a79_B 61 QNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRLQ-NISCC--PMASLRHLDLSFNDFDVLP 137 (562)
T ss_dssp SSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTSCCC-EECSC--CCTTCSEEECCSSCCSBCC
T ss_pred CCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCCcCC-ccCcc--ccccCCEEECCCCCccccC
Confidence 57777777777788888888888888888777777777777777777777777 44443 666777777777776642
Q ss_pred CCcccCCCCCCceeeccCCCCCC---------------------------------------------------------
Q 003158 81 IPPELSRLPSLVHMLLDNNNLTG--------------------------------------------------------- 103 (843)
Q Consensus 81 ~~~~l~~l~~L~~L~L~~N~l~~--------------------------------------------------------- 103 (843)
+|..|+++++|++|+|++|++++
T Consensus 138 ~p~~~~~l~~L~~L~L~~n~l~~~~~~~l~~L~L~~L~L~~n~l~~~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~ 217 (562)
T 3a79_B 138 VCKEFGNLTKLTFLGLSAAKFRQLDLLPVAHLHLSCILLDLVSYHIKGGETESLQIPNTTVLHLVFHPNSLFSVQVNMSV 217 (562)
T ss_dssp CCGGGGGCTTCCEEEEECSBCCTTTTGGGTTSCEEEEEEEESSCCCCSSSCCEEEECCEEEEEEEECSSSCCCCCCEEEE
T ss_pred chHhhcccCcccEEecCCCccccCchhhhhhceeeEEEeecccccccccCcccccccCcceEEEEecCccchhhhhhhcc
Confidence 34566666666666666665532
Q ss_pred -------------------------------------------------------------------------CCCccc-
Q 003158 104 -------------------------------------------------------------------------YLPPEL- 109 (843)
Q Consensus 104 -------------------------------------------------------------------------~~~~~~- 109 (843)
.+|..+
T Consensus 218 ~~l~~L~~L~l~~n~~~~~~l~~~~~~l~~l~~L~~L~L~~~~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~ip~~~~ 297 (562)
T 3a79_B 218 NALGHLQLSNIKLNDENCQRLMTFLSELTRGPTLLNVTLQHIETTWKCSVKLFQFFWPRPVEYLNIYNLTITERIDREEF 297 (562)
T ss_dssp SSEEEEEEEEEECCSTTHHHHHHHHHHHHSCSSCEEEEEEEEEECHHHHHHHHHHHTTSSEEEEEEEEEEECSCCCCCCC
T ss_pred cccceEEEecccccccccchHHHHHHHHhccCcceEEEecCCcCcHHHHHHHHHhhhcccccEEEEeccEeeccccchhh
Confidence 222221
Q ss_pred ----------------------------------------------------CCCCCCcEEEcCCCCCCCCCCCccccCC
Q 003158 110 ----------------------------------------------------SELPKLLILQLDNNNFEGTTIPASYSNM 137 (843)
Q Consensus 110 ----------------------------------------------------~~l~~L~~L~Ls~N~l~~~~~~~~~~~l 137 (843)
..+++|++|+|++|++++ ..|..+.++
T Consensus 298 ~~~~~~L~~L~~~~~~~~~~~~p~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~l~~L~~L~l~~n~l~~-~~~~~~~~l 376 (562)
T 3a79_B 298 TYSETALKSLMIEHVKNQVFLFSKEALYSVFAEMNIKMLSISDTPFIHMVCPPSPSSFTFLNFTQNVFTD-SVFQGCSTL 376 (562)
T ss_dssp CCCSCSCCEEEEEEEEECCCSSCHHHHHHHHHTCCCSEEEEESSCCCCCCCCSSCCCCCEEECCSSCCCT-TTTTTCCSC
T ss_pred hcccccchheehhhcccceeecChhhhhhhhccCcceEEEccCCCcccccCccCCCCceEEECCCCcccc-chhhhhccc
Confidence 333445555555555543 344455555
Q ss_pred CCCcEEEcCCCCCCCCCC---CCCCCCCCCEEEcccCcCCCCCCCCCCC--cCcCEEEccCCcCCCCCCcccCCCCCCcE
Q 003158 138 SKLLKLSLRNCSLQGPMP---DLSRIPNLGYLDLSSNQLNGSIPPGRLS--LNITTIKLSNNKLTGTIPSNFSGLPRLQR 212 (843)
Q Consensus 138 ~~L~~L~L~~N~l~~~~~---~~~~l~~L~~L~Ls~N~l~~~~p~~~~~--~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 212 (843)
++|+.|+|++|++++++. .+..+++|+.|+|++|++++.+|...+. .+|+.|+|++|.+++..|..+. ++|+.
T Consensus 377 ~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~--~~L~~ 454 (562)
T 3a79_B 377 KRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLP--PKVKV 454 (562)
T ss_dssp SSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCCEEECCSSCCCGGGGSSCC--TTCSE
T ss_pred CCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCCEEECCCCCCCcchhhhhc--CcCCE
Confidence 555555555555554332 2455555555555555555434443221 2555555555555544443332 46666
Q ss_pred EeCcCccCCCCCCchhhccccCCCCcceeEEcCCCCCCCCCCC-C-cCCCCcEEEeccCcccccCCcccccC-CCCC
Q 003158 213 LFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGS-F-NIPPNVTVRLRGNPFCLNTNAEQFCG-SHSD 286 (843)
Q Consensus 213 L~L~~N~l~~~~p~~~~~l~~l~~~~L~~L~l~~N~l~~~~~~-~-~~~~l~~l~l~~Np~~c~~~~~~~~~-~~~~ 286 (843)
|+|++|+|+ .+|..+.. .++|+.|+|++|+|++++.. + .++.++.|++++|||.|+|.+.++.. |...
T Consensus 455 L~L~~N~l~-~ip~~~~~-----l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~N~~~c~c~~~~~~~~~~~~ 525 (562)
T 3a79_B 455 LDLHNNRIM-SIPKDVTH-----LQALQELNVASNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCPGIRYLSEWINK 525 (562)
T ss_dssp EECCSSCCC-CCCTTTTS-----SCCCSEEECCSSCCCCCCTTSTTTCTTCCCEECCSCCBCCCHHHHHHHHHHHHH
T ss_pred EECCCCcCc-ccChhhcC-----CCCCCEEECCCCCCCCCCHHHHhcCCCCCEEEecCCCcCCCcchHHHHHHHHHh
Confidence 666666666 55555543 35677999999999999987 4 78999999999999999999998855 6543
No 262
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.97 E-value=1.5e-30 Score=318.79 Aligned_cols=272 Identities=20% Similarity=0.173 Sum_probs=169.4
Q ss_pred ccccccCCccccCCCCCCEEEccCCcCCccCccccCCCCCCcEEEcccCcCCccCccccccCCCCCEEEccCCccccCCC
Q 003158 3 NKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIP 82 (843)
Q Consensus 3 N~i~~~~p~~i~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~ 82 (843)
|++++..|..|.++++|+.|+|++|++++..|..|.++++|++|+|++|.+++..+..|.++++|+.|+|++|.|+...+
T Consensus 276 n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~ 355 (844)
T 3j0a_A 276 GFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAYIDLQKNHIAIIQD 355 (844)
T ss_dssp CCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCCCSCSCSSCTTCCEEECCSCCCCCCCS
T ss_pred CcccccChhhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCccCHHHhcCCCCCCEEECCCCCCCccCh
Confidence 44444444444555555555555555554444445555555555555555544444445555555555555555544444
Q ss_pred cccCCCCCCceeeccCCCCCCCCCcccCCCCCCcEEEcCCCCCC--------------------CCCCCccccCCCCCcE
Q 003158 83 PELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFE--------------------GTTIPASYSNMSKLLK 142 (843)
Q Consensus 83 ~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~--------------------~~~~~~~~~~l~~L~~ 142 (843)
..|.++++|+.|+|++|.+++. + .+++|+.|++++|++. +...+..+.++++|+.
T Consensus 356 ~~~~~l~~L~~L~Ls~N~l~~i-~----~~~~L~~L~l~~N~l~~l~~~~~~l~~L~ls~N~l~~l~~~~~~~~l~~L~~ 430 (844)
T 3j0a_A 356 QTFKFLEKLQTLDLRDNALTTI-H----FIPSIPDIFLSGNKLVTLPKINLTANLIHLSENRLENLDILYFLLRVPHLQI 430 (844)
T ss_dssp SCSCSCCCCCEEEEETCCSCCC-S----SCCSCSEEEEESCCCCCCCCCCTTCCEEECCSCCCCSSTTHHHHTTCTTCCE
T ss_pred hhhcCCCCCCEEECCCCCCCcc-c----CCCCcchhccCCCCcccccccccccceeecccCccccCchhhhhhcCCccce
Confidence 4444455555555555544421 1 1222333333332222 1111112346777788
Q ss_pred EEcCCCCCCCCCCC--CCCCCCCCEEEcccCcCCCCCC-----CCCCC-cCcCEEEccCCcCCCCCCcccCCCCCCcEEe
Q 003158 143 LSLRNCSLQGPMPD--LSRIPNLGYLDLSSNQLNGSIP-----PGRLS-LNITTIKLSNNKLTGTIPSNFSGLPRLQRLF 214 (843)
Q Consensus 143 L~L~~N~l~~~~~~--~~~l~~L~~L~Ls~N~l~~~~p-----~~~~~-~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 214 (843)
|+|++|++++.++. +..+++|+.|+|++|.+++..+ ..+.. .+|+.|+|++|.|++..|..|.++++|+.|+
T Consensus 431 L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 510 (844)
T 3j0a_A 431 LILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNYLNSLPPGVFSHLTALRGLS 510 (844)
T ss_dssp EEEESCCCCCCCSSSSSCSCTTCCBCEEESCCCSSSCCSCCCSSCSSCBCCEECCCCCHHHHTTCCTTSSSSCCSCSEEE
T ss_pred eeCCCCcccccccccccccCCccccccCCCCccccccccccchhhhcCcccccEEECCCCcccccChhHccchhhhheeE
Confidence 88888877766553 5667788888888888763222 22222 3788999999999988888899999999999
Q ss_pred CcCccCCCCCCchhhccccCCCCcceeEEcCCCCCCCCCCCCcCCCCcEEEeccCcccccCCcccccCCCCCC
Q 003158 215 IANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGSFNIPPNVTVRLRGNPFCLNTNAEQFCGSHSDD 287 (843)
Q Consensus 215 L~~N~l~~~~p~~~~~l~~l~~~~L~~L~l~~N~l~~~~~~~~~~~l~~l~l~~Np~~c~~~~~~~~~~~~~~ 287 (843)
|++|+|++..|..+. ++|+.|+|++|+|+++++.. +..+..|++++|||.|+|.+.+|..|+...
T Consensus 511 Ls~N~l~~l~~~~~~-------~~L~~L~Ls~N~l~~~~~~~-~~~L~~l~l~~Np~~C~c~~~~f~~~~~~~ 575 (844)
T 3j0a_A 511 LNSNRLTVLSHNDLP-------ANLEILDISRNQLLAPNPDV-FVSLSVLDITHNKFICECELSTFINWLNHT 575 (844)
T ss_dssp EESCCCSSCCCCCCC-------SCCCEEEEEEECCCCCCSCC-CSSCCEEEEEEECCCCSSSCCSHHHHHHHT
T ss_pred CCCCCCCccChhhhh-------ccccEEECCCCcCCCCChhH-hCCcCEEEecCCCcccccccHHHHHHHHhc
Confidence 999999876665543 56779999999999987654 668999999999999999999999887543
No 263
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.97 E-value=1.3e-30 Score=302.40 Aligned_cols=168 Identities=21% Similarity=0.308 Sum_probs=106.2
Q ss_pred CCCCCcEEEcCCCCCCCCCCCccccCCCCCcEEEcCCCCCCCCC---CCCCCCCCCCEEEcccCcCCCCCCCCCC--CcC
Q 003158 111 ELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPM---PDLSRIPNLGYLDLSSNQLNGSIPPGRL--SLN 185 (843)
Q Consensus 111 ~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~---~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--~~~ 185 (843)
.+++|++|+|++|++++ .+|..+.++++|+.|+|++|++++++ ..+..+++|+.|+|++|.+++.+|...+ ..+
T Consensus 322 ~l~~L~~L~Ls~n~l~~-~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~ 400 (520)
T 2z7x_B 322 KISPFLHLDFSNNLLTD-TVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKS 400 (520)
T ss_dssp SCCCCCEEECCSSCCCT-TTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTT
T ss_pred hCCcccEEEeECCccCh-hhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCcc
Confidence 34445555555555543 34445555555555555555555422 1245555555555555555543443321 125
Q ss_pred cCEEEccCCcCCCCCCcccCCCCCCcEEeCcCccCCCCCCchhhccccCCCCcceeEEcCCCCCCCCCCC-C-cCCCCcE
Q 003158 186 ITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGS-F-NIPPNVT 263 (843)
Q Consensus 186 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~l~~~~L~~L~l~~N~l~~~~~~-~-~~~~l~~ 263 (843)
|+.|+|++|.+++..|..+. ++|+.|+|++|+|+ .+|..+..+ ++|+.|+|++|+|+.++.. + .++.++.
T Consensus 401 L~~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~~~l-----~~L~~L~L~~N~l~~l~~~~~~~l~~L~~ 472 (520)
T 2z7x_B 401 LLSLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIK-SIPKQVVKL-----EALQELNVASNQLKSVPDGIFDRLTSLQK 472 (520)
T ss_dssp CCEEECCSSCCCGGGGGSCC--TTCCEEECCSSCCC-CCCGGGGGC-----TTCCEEECCSSCCCCCCTTTTTTCTTCCE
T ss_pred CCEEECcCCCCCcchhhhhc--ccCCEEECCCCccc-ccchhhhcC-----CCCCEEECCCCcCCccCHHHhccCCcccE
Confidence 66666666666555554443 56677777777766 566655543 4567999999999999986 4 7899999
Q ss_pred EEeccCcccccCCcccc-cCCCCCC
Q 003158 264 VRLRGNPFCLNTNAEQF-CGSHSDD 287 (843)
Q Consensus 264 l~l~~Np~~c~~~~~~~-~~~~~~~ 287 (843)
|++++|||.|+|.+.++ ..|+...
T Consensus 473 L~l~~N~~~c~c~~~~~~~~~~~~~ 497 (520)
T 2z7x_B 473 IWLHTNPWDCSCPRIDYLSRWLNKN 497 (520)
T ss_dssp EECCSSCBCCCHHHHHHHHHHHHHT
T ss_pred EECcCCCCcccCCchHHHHHHHHhc
Confidence 99999999999999998 7787544
No 264
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.97 E-value=8.9e-30 Score=305.42 Aligned_cols=273 Identities=20% Similarity=0.242 Sum_probs=214.2
Q ss_pred cccCCCCCCEEEccCCcCCccCccccCCCCCCcE----------------------------EEcccCcCCccCcccccc
Q 003158 12 EIGNIKSLELLLLNGNELTGSLPEELGYLPKLDR----------------------------IQIDQNYISGSLPKSFAN 63 (843)
Q Consensus 12 ~i~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~----------------------------L~L~~N~l~~~~~~~~~~ 63 (843)
.|..+++|++|+|++|++++..+..|.++++|++ |+|++|++++..|..|..
T Consensus 324 ~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~~~~~~~ 403 (680)
T 1ziw_A 324 SFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSW 403 (680)
T ss_dssp TTTTCTTCCEEECCSCCBCCCCTTTTTTCTTCCEEECTTCBSCCCEECTTTTGGGTTSCCCEEECTTSCCCEECTTTTTT
T ss_pred hcccCCCCCEEECCCCccCCCChhHhccccCCcEEECCCCchhhhhcchhhhcccccCcCceEECCCCCCCeEChhhhhC
Confidence 4555556666666666665555555555555554 555556666666777888
Q ss_pred CCCCCEEEccCCccccCCC-cccCCCCCCceeeccCCCCCCCCCcccCCCCCCcEEEcCCCCCCCC-CCCccccCCCCCc
Q 003158 64 LNKTRHFHMNNNSISGQIP-PELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGT-TIPASYSNMSKLL 141 (843)
Q Consensus 64 l~~L~~L~Ls~N~l~~~~~-~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~~~l~~L~ 141 (843)
+++|+.|+|++|.+++.++ ..|.++++|++|+|++|++.+..+..|..+++|+.|++++|.+.+. .+|..|.++++|+
T Consensus 404 l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~~l~~L~ 483 (680)
T 1ziw_A 404 LGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLT 483 (680)
T ss_dssp CTTCCEEECCSSCCEEECCSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCBCTTCSSCTTTTCTTCC
T ss_pred CCCCCEEeCCCCcCccccCcccccCcccccEEecCCCCcceeChhhhhcCcccccchhccccccccccCCcccccCCCCC
Confidence 8888888888888876555 6788888888888888888877788888888888898888887631 4688899999999
Q ss_pred EEEcCCCCCCCCCCC-CCCCCCCCEEEcccCcCCCCC----CC-----CCCCcCcCEEEccCCcCCCCCCcccCCCCCCc
Q 003158 142 KLSLRNCSLQGPMPD-LSRIPNLGYLDLSSNQLNGSI----PP-----GRLSLNITTIKLSNNKLTGTIPSNFSGLPRLQ 211 (843)
Q Consensus 142 ~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~----p~-----~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 211 (843)
.|+|++|+++++++. +..+++|+.|+|++|++++.. |. .....+|+.|+|++|+++...+..|.++++|+
T Consensus 484 ~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~ 563 (680)
T 1ziw_A 484 ILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELK 563 (680)
T ss_dssp EEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCC
T ss_pred EEECCCCCCCcCChhhhccccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCCCCCHHHcccccCcc
Confidence 999999999998885 899999999999999998431 11 11224899999999999966667899999999
Q ss_pred EEeCcCccCCCCCCchhhccccCCCCcceeEEcCCCCCCCCCCCC---cCCCCcEEEeccCcccccCCc-ccccCCCCCC
Q 003158 212 RLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGSF---NIPPNVTVRLRGNPFCLNTNA-EQFCGSHSDD 287 (843)
Q Consensus 212 ~L~L~~N~l~~~~p~~~~~l~~l~~~~L~~L~l~~N~l~~~~~~~---~~~~l~~l~l~~Np~~c~~~~-~~~~~~~~~~ 287 (843)
.|+|++|+|++..+..|..+. +|+.|+|++|+|++++... .++.+..|++++|||.|+|.. .||..|+...
T Consensus 564 ~L~Ls~N~l~~l~~~~~~~l~-----~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l~l~~N~~~c~c~~~~~~~~~~~~~ 638 (680)
T 1ziw_A 564 IIDLGLNNLNTLPASVFNNQV-----SLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCTCESIAWFVNWINET 638 (680)
T ss_dssp EEECCSSCCCCCCTTTTTTCT-----TCCEEECTTSCCCBCCHHHHHHHHTTCSEEECTTCCCCBCCCCCSSEECCSSCC
T ss_pred eeECCCCCCCcCCHhHhCCCC-----CCCEEECCCCcCCccChhHhcccccccCEEEccCCCcccCCccHHHHHHHHHhc
Confidence 999999999966665565544 5669999999999998764 579999999999999999996 9999998765
Q ss_pred Cc
Q 003158 288 DN 289 (843)
Q Consensus 288 ~~ 289 (843)
..
T Consensus 639 ~~ 640 (680)
T 1ziw_A 639 HT 640 (680)
T ss_dssp --
T ss_pred Cc
Confidence 43
No 265
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.97 E-value=6.6e-30 Score=285.20 Aligned_cols=273 Identities=19% Similarity=0.186 Sum_probs=193.9
Q ss_pred ccccccCCccccCCCCCCEEEccCCcCCccCccccCCCCCCcEEEcccCcCCccCccccccCCCCCEEEccCCccccCCC
Q 003158 3 NKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIP 82 (843)
Q Consensus 3 N~i~~~~p~~i~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~ 82 (843)
|.++...+..|.++++|++|+|++|.+++..+..|+++++|++|+|++|.+++..|..|.++++|++|+|++|.++...+
T Consensus 55 ~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~ 134 (390)
T 3o6n_A 55 STMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPR 134 (390)
T ss_dssp CEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCT
T ss_pred CchhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccCcCCH
Confidence 45553333346777888888888888887777778888888888888888887777777888888888888888875544
Q ss_pred cccCCCCCCceeeccCCCCCCCCCcccCCCCCCcEEEcCCCCCCCCCCCccccC--------------------------
Q 003158 83 PELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSN-------------------------- 136 (843)
Q Consensus 83 ~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~-------------------------- 136 (843)
..|.++++|++|+|++|++++..+..|..+++|++|+|++|++++.. ...+.+
T Consensus 135 ~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~-~~~l~~L~~L~l~~n~l~~~~~~~~L~~L~l~ 213 (390)
T 3o6n_A 135 GIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVD-LSLIPSLFHANVSYNLLSTLAIPIAVEELDAS 213 (390)
T ss_dssp TTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBCC-GGGCTTCSEEECCSSCCSEEECCSSCSEEECC
T ss_pred HHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCccc-cccccccceeecccccccccCCCCcceEEECC
Confidence 55677888888888888887776777778888888888888776421 111111
Q ss_pred -----------CCCCcEEEcCCCCCCCCCCCCCCCCCCCEEEcccCcCCCCCCCCCCC-cCcCEEEccCCcCCCCCCccc
Q 003158 137 -----------MSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLS-LNITTIKLSNNKLTGTIPSNF 204 (843)
Q Consensus 137 -----------l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-~~L~~L~Ls~N~l~~~~p~~~ 204 (843)
.++|+.|+|++|.+++. +.+..+++|+.|+|++|.+++..|..+.. .+|+.|+|++|.+++ +|..+
T Consensus 214 ~n~l~~~~~~~~~~L~~L~l~~n~l~~~-~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~ 291 (390)
T 3o6n_A 214 HNSINVVRGPVNVELTILKLQHNNLTDT-AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYG 291 (390)
T ss_dssp SSCCCEEECCCCSSCCEEECCSSCCCCC-GGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECCSSCCCE-EECSS
T ss_pred CCeeeeccccccccccEEECCCCCCccc-HHHcCCCCccEEECCCCcCCCcChhHccccccCCEEECCCCcCcc-cCccc
Confidence 12455555555555543 34666777888888888887555544333 378888888888874 45566
Q ss_pred CCCCCCcEEeCcCccCCCCCCchhhccccCCCCcceeEEcCCCCCCCCCCCCcCCCCcEEEeccCcccccCCcccccCCC
Q 003158 205 SGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGSFNIPPNVTVRLRGNPFCLNTNAEQFCGSH 284 (843)
Q Consensus 205 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~l~~~~L~~L~l~~N~l~~~~~~~~~~~l~~l~l~~Np~~c~~~~~~~~~~~ 284 (843)
..+++|++|+|++|+++ .+|..+..+. +|+.|+|++|+|+.++ ...++.++.|++++|||.|+|...++..+.
T Consensus 292 ~~l~~L~~L~L~~n~l~-~~~~~~~~l~-----~L~~L~L~~N~i~~~~-~~~~~~L~~L~l~~N~~~~~~~~~~~~~~~ 364 (390)
T 3o6n_A 292 QPIPTLKVLDLSHNHLL-HVERNQPQFD-----RLENLYLDHNSIVTLK-LSTHHTLKNLTLSHNDWDCNSLRALFRNVA 364 (390)
T ss_dssp SCCTTCCEEECCSSCCC-CCGGGHHHHT-----TCSEEECCSSCCCCCC-CCTTCCCSEEECCSSCEEHHHHHHHTTTCC
T ss_pred CCCCCCCEEECCCCcce-ecCccccccC-----cCCEEECCCCccceeC-chhhccCCEEEcCCCCccchhHHHHHHHHH
Confidence 77888888888888887 5566665544 4568999999999886 336899999999999999999766655544
Q ss_pred C
Q 003158 285 S 285 (843)
Q Consensus 285 ~ 285 (843)
.
T Consensus 365 ~ 365 (390)
T 3o6n_A 365 R 365 (390)
T ss_dssp T
T ss_pred h
Confidence 3
No 266
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.96 E-value=1.5e-29 Score=298.19 Aligned_cols=273 Identities=19% Similarity=0.188 Sum_probs=201.3
Q ss_pred CccccccCCccccCCCCCCEEEccCCcCCccCccccCCCCCCcEEEcccCcCCccCccccccCCCCCEEEccCCccccCC
Q 003158 2 WNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQI 81 (843)
Q Consensus 2 ~N~i~~~~p~~i~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 81 (843)
+|.+++..+..|.++++|++|+|++|.|++..|..|+.+++|++|+|++|.|++..|..|+++++|+.|+|++|.|++..
T Consensus 60 ~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~ 139 (597)
T 3oja_B 60 NSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLP 139 (597)
T ss_dssp SCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCC
T ss_pred CCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCC
Confidence 34555444455677888888888888888777778888888888888888888777777888888888888888888665
Q ss_pred CcccCCCCCCceeeccCCCCCCCCCcccCCCCCCcEEEcCCCCCCCCCCCccccCC------------------------
Q 003158 82 PPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNM------------------------ 137 (843)
Q Consensus 82 ~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l------------------------ 137 (843)
+..|.++++|++|+|++|.+++..|..|..+++|++|+|++|.+++.. ...+.++
T Consensus 140 ~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~-~~~l~~L~~L~l~~n~l~~l~~~~~L~~L~l 218 (597)
T 3oja_B 140 RGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVD-LSLIPSLFHANVSYNLLSTLAIPIAVEELDA 218 (597)
T ss_dssp TTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBCC-GGGCTTCSEEECCSSCCSEEECCTTCSEEEC
T ss_pred HHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCcC-hhhhhhhhhhhcccCccccccCCchhheeec
Confidence 566788888888888888888777777888888888888888876421 1111111
Q ss_pred -------------CCCcEEEcCCCCCCCCCCCCCCCCCCCEEEcccCcCCCCCCCCCCC-cCcCEEEccCCcCCCCCCcc
Q 003158 138 -------------SKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLS-LNITTIKLSNNKLTGTIPSN 203 (843)
Q Consensus 138 -------------~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-~~L~~L~Ls~N~l~~~~p~~ 203 (843)
++|+.|+|++|.+++. +.+..+++|+.|+|++|.+++.+|..+.. .+|+.|+|++|.+++ +|..
T Consensus 219 s~n~l~~~~~~~~~~L~~L~L~~n~l~~~-~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~ 296 (597)
T 3oja_B 219 SHNSINVVRGPVNVELTILKLQHNNLTDT-AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLY 296 (597)
T ss_dssp CSSCCCEEECSCCSCCCEEECCSSCCCCC-GGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECTTSCCCE-EECS
T ss_pred cCCcccccccccCCCCCEEECCCCCCCCC-hhhccCCCCCEEECCCCccCCCCHHHhcCccCCCEEECCCCCCCC-CCcc
Confidence 2355555555555542 34667788888888888888666655443 478888888888885 4666
Q ss_pred cCCCCCCcEEeCcCccCCCCCCchhhccccCCCCcceeEEcCCCCCCCCCCCCcCCCCcEEEeccCcccccCCcccccCC
Q 003158 204 FSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGSFNIPPNVTVRLRGNPFCLNTNAEQFCGS 283 (843)
Q Consensus 204 ~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~l~~~~L~~L~l~~N~l~~~~~~~~~~~l~~l~l~~Np~~c~~~~~~~~~~ 283 (843)
+..+++|+.|+|++|.|+ .+|..+..+. +|+.|+|++|+|+.++ ...++.+..|++++|||.|+|...++..+
T Consensus 297 ~~~l~~L~~L~Ls~N~l~-~i~~~~~~l~-----~L~~L~L~~N~l~~~~-~~~~~~L~~L~l~~N~~~~~~~~~~~~~~ 369 (597)
T 3oja_B 297 GQPIPTLKVLDLSHNHLL-HVERNQPQFD-----RLENLYLDHNSIVTLK-LSTHHTLKNLTLSHNDWDCNSLRALFRNV 369 (597)
T ss_dssp SSCCTTCCEEECCSSCCC-CCGGGHHHHT-----TCSEEECCSSCCCCCC-CCTTCCCSEEECCSSCEEHHHHHHHTTTC
T ss_pred cccCCCCcEEECCCCCCC-ccCcccccCC-----CCCEEECCCCCCCCcC-hhhcCCCCEEEeeCCCCCChhHHHHHHHH
Confidence 777888888888888888 5777666554 4558999999998885 33688999999999999999966655544
Q ss_pred C
Q 003158 284 H 284 (843)
Q Consensus 284 ~ 284 (843)
.
T Consensus 370 ~ 370 (597)
T 3oja_B 370 A 370 (597)
T ss_dssp C
T ss_pred h
Confidence 4
No 267
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.96 E-value=3.9e-30 Score=304.97 Aligned_cols=262 Identities=21% Similarity=0.296 Sum_probs=226.4
Q ss_pred CCccccccCCccccCCCCCCEEEccCCcCCcc-----------------CccccC--CCCCCcEEEcccCcCCccCcccc
Q 003158 1 MWNKISGSIPKEIGNIKSLELLLLNGNELTGS-----------------LPEELG--YLPKLDRIQIDQNYISGSLPKSF 61 (843)
Q Consensus 1 ~~N~i~~~~p~~i~~l~~L~~L~L~~n~l~~~-----------------~p~~~~--~l~~L~~L~L~~N~l~~~~~~~~ 61 (843)
|+|+++| +|..|+++++|++|+|++|++++. +|+.++ ++++|++|+|++|.+.+.+|..|
T Consensus 191 ~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l 269 (636)
T 4eco_A 191 LSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFL 269 (636)
T ss_dssp CSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTT
T ss_pred ccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccChHHH
Confidence 4789998 999999999999999999999986 999999 99999999999999999999999
Q ss_pred ccCCCCCEEEccCCc-ccc-CCCcccCCC------CCCceeeccCCCCCCCCCc--ccCCCCCCcEEEcCCCCCCCCCCC
Q 003158 62 ANLNKTRHFHMNNNS-ISG-QIPPELSRL------PSLVHMLLDNNNLTGYLPP--ELSELPKLLILQLDNNNFEGTTIP 131 (843)
Q Consensus 62 ~~l~~L~~L~Ls~N~-l~~-~~~~~l~~l------~~L~~L~L~~N~l~~~~~~--~~~~l~~L~~L~Ls~N~l~~~~~~ 131 (843)
.++++|++|+|++|+ +++ .+|..++.+ ++|++|+|++|+++ .+|. .+.++++|++|+|++|++.| .+|
T Consensus 270 ~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~l~g-~ip 347 (636)
T 4eco_A 270 KALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLECLYNQLEG-KLP 347 (636)
T ss_dssp TTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEECCSCCCEE-ECC
T ss_pred hcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEeCcCCcCcc-chh
Confidence 999999999999998 988 788888776 99999999999999 7888 89999999999999999986 678
Q ss_pred ccccCCCCCcEEEcCCCCCCCCCCCCCCCCC-CCEEEcccCcCCCCCCCCCCCc---CcCEEEccCCcCCCCCCcccC--
Q 003158 132 ASYSNMSKLLKLSLRNCSLQGPMPDLSRIPN-LGYLDLSSNQLNGSIPPGRLSL---NITTIKLSNNKLTGTIPSNFS-- 205 (843)
Q Consensus 132 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~-L~~L~Ls~N~l~~~~p~~~~~~---~L~~L~Ls~N~l~~~~p~~~~-- 205 (843)
.+.++++|+.|+|++|+++.++..+..+++ |+.|+|++|.++ .+|...... +|+.|+|++|.+++.+|..|.
T Consensus 348 -~~~~l~~L~~L~L~~N~l~~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~ 425 (636)
T 4eco_A 348 -AFGSEIKLASLNLAYNQITEIPANFCGFTEQVENLSFAHNKLK-YIPNIFDAKSVSVMSAIDFSYNEIGSVDGKNFDPL 425 (636)
T ss_dssp -CCEEEEEESEEECCSSEEEECCTTSEEECTTCCEEECCSSCCS-SCCSCCCTTCSSCEEEEECCSSCTTTTTTCSSCTT
T ss_pred -hhCCCCCCCEEECCCCccccccHhhhhhcccCcEEEccCCcCc-ccchhhhhcccCccCEEECcCCcCCCcchhhhccc
Confidence 889999999999999999988778899998 999999999998 788765443 699999999999999998888
Q ss_pred -----CCCCCcEEeCcCccCCCCCCchhhccccCCCCcceeEEcCCCCCCCCCCCC-c-CC-------CCcEEEeccCcc
Q 003158 206 -----GLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGSF-N-IP-------PNVTVRLRGNPF 271 (843)
Q Consensus 206 -----~l~~L~~L~L~~N~l~~~~p~~~~~l~~l~~~~L~~L~l~~N~l~~~~~~~-~-~~-------~l~~l~l~~Np~ 271 (843)
.+++|++|+|++|+|+ .+|..+.. ..++|+.|+|++|+|+.++... . .. .++.|++++|.+
T Consensus 426 ~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~~----~l~~L~~L~Ls~N~l~~i~~~~~~~~~~~~~~l~~L~~L~Ls~N~l 500 (636)
T 4eco_A 426 DPTPFKGINVSSINLSNNQIS-KFPKELFS----TGSPLSSINLMGNMLTEIPKNSLKDENENFKNTYLLTSIDLRFNKL 500 (636)
T ss_dssp CSSCCCCCCEEEEECCSSCCC-SCCTHHHH----TTCCCSEEECCSSCCSBCCSSSSEETTEECTTGGGCCEEECCSSCC
T ss_pred ccccccCCCCCEEECcCCccC-cCCHHHHc----cCCCCCEEECCCCCCCCcCHHHhccccccccccCCccEEECcCCcC
Confidence 8889999999999998 56655433 1234557888888888777654 2 22 788888888876
Q ss_pred c
Q 003158 272 C 272 (843)
Q Consensus 272 ~ 272 (843)
.
T Consensus 501 ~ 501 (636)
T 4eco_A 501 T 501 (636)
T ss_dssp C
T ss_pred C
Confidence 5
No 268
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.96 E-value=2.5e-30 Score=284.56 Aligned_cols=279 Identities=19% Similarity=0.236 Sum_probs=229.3
Q ss_pred CccccccCCccccCCCCCCEEEccCCcCCccCccccCCCCCCcEEEcccCcCCccCccccccCCCCCEEEccCCccccCC
Q 003158 2 WNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQI 81 (843)
Q Consensus 2 ~N~i~~~~p~~i~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 81 (843)
.|+++ .+|..+. ++|++|+|++|++++..+..|.++++|++|+|++|++++..+..|.++++|++|+|++|.|++..
T Consensus 40 ~~~l~-~iP~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~ 116 (353)
T 2z80_A 40 SGSLN-SIPSGLT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLSNLS 116 (353)
T ss_dssp STTCS-SCCTTCC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSSCC
T ss_pred CCCcc-ccccccc--ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEECCCCcCCcCC
Confidence 45666 6777665 58999999999999877778999999999999999999888888999999999999999999665
Q ss_pred CcccCCCCCCceeeccCCCCCCCCC-cccCCCCCCcEEEcCCCC-CCCCCCCccccCCCCCcEEEcCCCCCCCCCC-CCC
Q 003158 82 PPELSRLPSLVHMLLDNNNLTGYLP-PELSELPKLLILQLDNNN-FEGTTIPASYSNMSKLLKLSLRNCSLQGPMP-DLS 158 (843)
Q Consensus 82 ~~~l~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~Ls~N~-l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~ 158 (843)
+..|.++++|++|+|++|+++...+ ..+..+++|++|++++|. +.. ..+..|.++++|+.|++++|++++..+ .+.
T Consensus 117 ~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~-~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~ 195 (353)
T 2z80_A 117 SSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTK-IQRKDFAGLTFLEELEIDASDLQSYEPKSLK 195 (353)
T ss_dssp HHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCE-ECTTTTTTCCEEEEEEEEETTCCEECTTTTT
T ss_pred HhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCccccc-cCHHHccCCCCCCEEECCCCCcCccCHHHHh
Confidence 5668999999999999999995544 478999999999999995 543 446789999999999999999998766 589
Q ss_pred CCCCCCEEEcccCcCCCCCCCCCC--CcCcCEEEccCCcCCCCCCcccC---CCCCCcEEeCcCccCCCC----CCchhh
Q 003158 159 RIPNLGYLDLSSNQLNGSIPPGRL--SLNITTIKLSNNKLTGTIPSNFS---GLPRLQRLFIANNSLSGS----IPSSIW 229 (843)
Q Consensus 159 ~l~~L~~L~Ls~N~l~~~~p~~~~--~~~L~~L~Ls~N~l~~~~p~~~~---~l~~L~~L~L~~N~l~~~----~p~~~~ 229 (843)
.+++|+.|++++|.++ .+|.... ..+|+.|+|++|.+++..+..+. ....++.++|++|.+++. +|..+.
T Consensus 196 ~l~~L~~L~l~~n~l~-~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~~~~l~~l~L~~~~l~~~~l~~l~~~l~ 274 (353)
T 2z80_A 196 SIQNVSHLILHMKQHI-LLLEIFVDVTSSVECLELRDTDLDTFHFSELSTGETNSLIKKFTFRNVKITDESLFQVMKLLN 274 (353)
T ss_dssp TCSEEEEEEEECSCST-THHHHHHHHTTTEEEEEEESCBCTTCCCC------CCCCCCEEEEESCBCCHHHHHHHHHHHH
T ss_pred ccccCCeecCCCCccc-cchhhhhhhcccccEEECCCCccccccccccccccccchhhccccccccccCcchhhhHHHHh
Confidence 9999999999999987 5554332 34899999999999987665544 467788999999988863 555555
Q ss_pred ccccCCCCcceeEEcCCCCCCCCCCCC--cCCCCcEEEeccCcccccCC-cccccCCCCCCCcc
Q 003158 230 QSRTLNATETFILDFQNNNLTNISGSF--NIPPNVTVRLRGNPFCLNTN-AEQFCGSHSDDDNE 290 (843)
Q Consensus 230 ~l~~l~~~~L~~L~l~~N~l~~~~~~~--~~~~l~~l~l~~Np~~c~~~-~~~~~~~~~~~~~~ 290 (843)
.+ ++|+.|+|++|+|+.++... .+++++.|++++|||.|+|. +.++..|.......
T Consensus 275 ~l-----~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~~~~~~~~l~~l~~~~~~~~~~ 333 (353)
T 2z80_A 275 QI-----SGLLELEFSRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRIDYLSRWLNKNSQK 333 (353)
T ss_dssp TC-----TTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCCCHHHHHHHHHHHHHTTTT
T ss_pred cc-----cCCCEEECCCCCCCccCHHHHhcCCCCCEEEeeCCCccCcCCCcHHHHHHHHhcccc
Confidence 44 45669999999999999874 78999999999999999996 77777777654433
No 269
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.96 E-value=8.9e-30 Score=307.28 Aligned_cols=235 Identities=21% Similarity=0.271 Sum_probs=191.0
Q ss_pred CccccCCCCCCcEEEcccCcCCc-----------------cCccccc--cCCCCCEEEccCCccccCCCcccCCCCCCce
Q 003158 33 LPEELGYLPKLDRIQIDQNYISG-----------------SLPKSFA--NLNKTRHFHMNNNSISGQIPPELSRLPSLVH 93 (843)
Q Consensus 33 ~p~~~~~l~~L~~L~L~~N~l~~-----------------~~~~~~~--~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~ 93 (843)
+|..|++|++|++|+|++|+|++ .+|..++ ++++|+.|+|++|.+.+.+|..|.++++|+.
T Consensus 440 IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~ 519 (876)
T 4ecn_A 440 ISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQS 519 (876)
T ss_dssp ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCE
T ss_pred hhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCE
Confidence 77888888899999999999887 3788877 8889999999998888888888888899999
Q ss_pred eeccCCC-CCC-CCCcccCCC-------CCCcEEEcCCCCCCCCCCCc--cccCCCCCcEEEcCCCCCCCCCCCCCCCCC
Q 003158 94 MLLDNNN-LTG-YLPPELSEL-------PKLLILQLDNNNFEGTTIPA--SYSNMSKLLKLSLRNCSLQGPMPDLSRIPN 162 (843)
Q Consensus 94 L~L~~N~-l~~-~~~~~~~~l-------~~L~~L~Ls~N~l~~~~~~~--~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~ 162 (843)
|+|++|+ +++ .+|..+..+ ++|+.|+|++|+++ .+|. .+.++++|+.|+|++|+++.++ .+..+++
T Consensus 520 L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~--~ip~~~~l~~L~~L~~L~Ls~N~l~~lp-~~~~L~~ 596 (876)
T 4ecn_A 520 LNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE--EFPASASLQKMVKLGLLDCVHNKVRHLE-AFGTNVK 596 (876)
T ss_dssp EECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC--BCCCHHHHTTCTTCCEEECTTSCCCBCC-CCCTTSE
T ss_pred EECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC--ccCChhhhhcCCCCCEEECCCCCcccch-hhcCCCc
Confidence 9999988 876 677655544 48899999999886 5777 8888889999999999888655 7888888
Q ss_pred CCEEEcccCcCCCCCCCCCCCc-C-cCEEEccCCcCCCCCCcccCCCCC--CcEEeCcCccCCCCCCchhhccccCCCCc
Q 003158 163 LGYLDLSSNQLNGSIPPGRLSL-N-ITTIKLSNNKLTGTIPSNFSGLPR--LQRLFIANNSLSGSIPSSIWQSRTLNATE 238 (843)
Q Consensus 163 L~~L~Ls~N~l~~~~p~~~~~~-~-L~~L~Ls~N~l~~~~p~~~~~l~~--L~~L~L~~N~l~~~~p~~~~~l~~l~~~~ 238 (843)
|+.|+|++|+++ .+|..+... + |+.|+|++|.|+ .+|..+..++. |+.|+|++|+|++.+|.....+..+..++
T Consensus 597 L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~~~~~~~~~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~ 674 (876)
T 4ecn_A 597 LTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLK-YIPNIFNAKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGIN 674 (876)
T ss_dssp ESEEECCSSCCS-CCCTTSCEECTTCCEEECCSSCCC-SCCSCCCTTCSSCEEEEECCSSCTTTTSSSCSSCTTTCCCCC
T ss_pred ceEEECcCCccc-cchHHHhhccccCCEEECcCCCCC-cCchhhhccccCCCCEEECcCCcCCCccccchhhhccccCCC
Confidence 999999999888 777665543 5 889999999888 77877777654 88899999988887776555555566678
Q ss_pred ceeEEcCCCCCCCCCCCC--cCCCCcEEEeccCccc
Q 003158 239 TFILDFQNNNLTNISGSF--NIPPNVTVRLRGNPFC 272 (843)
Q Consensus 239 L~~L~l~~N~l~~~~~~~--~~~~l~~l~l~~Np~~ 272 (843)
|+.|+|++|+|+.++... .++.|+.|+|++|.+.
T Consensus 675 L~~L~Ls~N~L~~lp~~~~~~l~~L~~L~Ls~N~L~ 710 (876)
T 4ecn_A 675 ASTVTLSYNEIQKFPTELFATGSPISTIILSNNLMT 710 (876)
T ss_dssp EEEEECCSSCCCSCCHHHHHTTCCCSEEECCSCCCS
T ss_pred cCEEEccCCcCCccCHHHHccCCCCCEEECCCCcCC
Confidence 888888888888887654 5788888888888765
No 270
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.96 E-value=5.7e-29 Score=291.97 Aligned_cols=128 Identities=16% Similarity=0.246 Sum_probs=89.6
Q ss_pred CCCCCCCCEEEcccCcCCCCCCCCCCC-cCcCEEEccCCcCC-CCCCcccCCCCCCcEEeCcCccCCCCCCchhhccccC
Q 003158 157 LSRIPNLGYLDLSSNQLNGSIPPGRLS-LNITTIKLSNNKLT-GTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTL 234 (843)
Q Consensus 157 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~-~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~l 234 (843)
+..+++|+.|++++|.+++.+|..+.. .+|+.|+|++|.++ +.+|..|..+++|++|+|++|++++..|..+..+
T Consensus 417 ~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l--- 493 (570)
T 2z63_A 417 FLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSL--- 493 (570)
T ss_dssp TTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTC---
T ss_pred hhcCCCCCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcc---
Confidence 444555555555555555444433222 36666666666665 4566667777777777777777776666666554
Q ss_pred CCCcceeEEcCCCCCCCCCCCC--cCCCCcEEEeccCcccccCCccccc-CCCCCCCc
Q 003158 235 NATETFILDFQNNNLTNISGSF--NIPPNVTVRLRGNPFCLNTNAEQFC-GSHSDDDN 289 (843)
Q Consensus 235 ~~~~L~~L~l~~N~l~~~~~~~--~~~~l~~l~l~~Np~~c~~~~~~~~-~~~~~~~~ 289 (843)
++|+.|++++|+|++++... .++.++.|++++|||.|+|...++. .|+.....
T Consensus 494 --~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~wl~~~~~ 549 (570)
T 2z63_A 494 --SSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRIDYLSRWLNKNSQ 549 (570)
T ss_dssp --TTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTTTHHHHHHHHHTGG
T ss_pred --cCCCEEeCCCCcCCCCCHHHhhcccCCcEEEecCCcccCCCcchHHHHHHHHhccc
Confidence 45669999999999998754 7899999999999999999988876 88765443
No 271
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.96 E-value=6.3e-29 Score=267.61 Aligned_cols=258 Identities=17% Similarity=0.223 Sum_probs=153.2
Q ss_pred CEEEccCCcCCccCccccCCCCCCcEEEcccCcCCccCccccccCCCCCEEEccCCccccC--CCcccCCCCCCceeecc
Q 003158 20 ELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQ--IPPELSRLPSLVHMLLD 97 (843)
Q Consensus 20 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~--~~~~l~~l~~L~~L~L~ 97 (843)
+.++.+++.++ .+|..+. ++|++|+|++|+++...+..|.++++|+.|+|++|.++.. .+..+..+++|++|+|+
T Consensus 10 ~~l~c~~~~l~-~ip~~~~--~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~Ls 86 (306)
T 2z66_A 10 TEIRCNSKGLT-SVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLS 86 (306)
T ss_dssp TEEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEECC
T ss_pred CEEEcCCCCcc-cCCCCCC--CCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEECC
Confidence 35555555555 4444332 4566666666666533333455666666666666665522 13444455666666666
Q ss_pred CCCCCCCCCcccCCCCCCcEEEcCCCCCCCCCCCccccCCCCCcEEEcCCCCCCCCCCC-CCCCCCCCEEEcccCcCCC-
Q 003158 98 NNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMPD-LSRIPNLGYLDLSSNQLNG- 175 (843)
Q Consensus 98 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~- 175 (843)
+|.++ .+|..+..+++|++|+|++|++.+......+..+++|+.|+|++|.+++..+. +..+++|+.|+|++|.+++
T Consensus 87 ~n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~ 165 (306)
T 2z66_A 87 FNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQEN 165 (306)
T ss_dssp SCSEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGG
T ss_pred CCccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccccc
Confidence 66655 34445555666666666666665321113555666666666666666555443 5556666666666666654
Q ss_pred CCCCCCCC-cCcCEEEccCCcCCCCCCcccCCCCCCcEEeCcCccCCCCCCchhhccccCCCCcceeEEcCCCCCCCCCC
Q 003158 176 SIPPGRLS-LNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISG 254 (843)
Q Consensus 176 ~~p~~~~~-~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~l~~~~L~~L~l~~N~l~~~~~ 254 (843)
.+|..+.. .+|+.|+|++|.+++..|..|..+++|++|+|++|++++..+..+..+ ++|+.|+|++|++++...
T Consensus 166 ~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l-----~~L~~L~L~~N~l~~~~~ 240 (306)
T 2z66_A 166 FLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCL-----NSLQVLDYSLNHIMTSKK 240 (306)
T ss_dssp EECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTC-----TTCCEEECTTSCCCBCSS
T ss_pred cchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCc-----ccCCEeECCCCCCcccCH
Confidence 23333322 256666666666666666666666677777777777665555444433 344467777777766554
Q ss_pred CC--cC-CCCcEEEeccCcccccCCcccccCCCCC
Q 003158 255 SF--NI-PPNVTVRLRGNPFCLNTNAEQFCGSHSD 286 (843)
Q Consensus 255 ~~--~~-~~l~~l~l~~Np~~c~~~~~~~~~~~~~ 286 (843)
.. .+ +.+..|++++|+|.|+|...++..|+..
T Consensus 241 ~~~~~~~~~L~~L~L~~N~~~~~c~~~~~~~~l~~ 275 (306)
T 2z66_A 241 QELQHFPSSLAFLNLTQNDFACTCEHQSFLQWIKD 275 (306)
T ss_dssp SSCCCCCTTCCEEECTTCCEECSGGGHHHHHHHHH
T ss_pred HHHHhhhccCCEEEccCCCeecccChHHHHHHHHh
Confidence 32 45 3789999999999999999999888764
No 272
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.96 E-value=1e-28 Score=292.86 Aligned_cols=258 Identities=20% Similarity=0.276 Sum_probs=150.2
Q ss_pred CccccccCCc--cccCCCCCCEEEccCCcCCccCccccCCCCCCcEEEcccCcCCccCccccccCCC-CCEEEccCCccc
Q 003158 2 WNKISGSIPK--EIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNK-TRHFHMNNNSIS 78 (843)
Q Consensus 2 ~N~i~~~~p~--~i~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~-L~~L~Ls~N~l~ 78 (843)
+|+++ .+|. .|+++++|++|+|++|+++|.+| .|+.+++|++|+|++|+++ .+|..+..+++ |+.|+|++|.++
T Consensus 314 ~n~l~-~ip~~~~l~~l~~L~~L~L~~N~l~g~ip-~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~ 390 (636)
T 4eco_A 314 YNNLK-TFPVETSLQKMKKLGMLECLYNQLEGKLP-AFGSEIKLASLNLAYNQIT-EIPANFCGFTEQVENLSFAHNKLK 390 (636)
T ss_dssp SSCCS-SCCCHHHHTTCTTCCEEECCSCCCEEECC-CCEEEEEESEEECCSSEEE-ECCTTSEEECTTCCEEECCSSCCS
T ss_pred CCcCC-ccCchhhhccCCCCCEEeCcCCcCccchh-hhCCCCCCCEEECCCCccc-cccHhhhhhcccCcEEEccCCcCc
Confidence 34455 4555 55555555555555555555555 5555555555555555555 45555555555 666666666555
Q ss_pred cCCCcccCCCC--CCceeeccCCCCCCCCCcccC-------CCCCCcEEEcCCCCCCCCCCCc-cccCCCCCcEEEcCCC
Q 003158 79 GQIPPELSRLP--SLVHMLLDNNNLTGYLPPELS-------ELPKLLILQLDNNNFEGTTIPA-SYSNMSKLLKLSLRNC 148 (843)
Q Consensus 79 ~~~~~~l~~l~--~L~~L~L~~N~l~~~~~~~~~-------~l~~L~~L~Ls~N~l~~~~~~~-~~~~l~~L~~L~L~~N 148 (843)
.+|..+..++ +|+.|+|++|++++..|..|. .+++|++|+|++|+++ .+|. .+..+++|+.|+|++|
T Consensus 391 -~lp~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~--~lp~~~~~~l~~L~~L~Ls~N 467 (636)
T 4eco_A 391 -YIPNIFDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQIS--KFPKELFSTGSPLSSINLMGN 467 (636)
T ss_dssp -SCCSCCCTTCSSCEEEEECCSSCTTTTTTCSSCTTCSSCCCCCCEEEEECCSSCCC--SCCTHHHHTTCCCSEEECCSS
T ss_pred -ccchhhhhcccCccCEEECcCCcCCCcchhhhcccccccccCCCCCEEECcCCccC--cCCHHHHccCCCCCEEECCCC
Confidence 4455544433 566666666666655555555 5556666666666665 2333 2344666666666666
Q ss_pred CCCCCCCC-CCCC-------CCCCEEEcccCcCCCCCCCCCC---CcCcCEEEccCCcCCCCCCcccCCCCCCcEEeC--
Q 003158 149 SLQGPMPD-LSRI-------PNLGYLDLSSNQLNGSIPPGRL---SLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFI-- 215 (843)
Q Consensus 149 ~l~~~~~~-~~~l-------~~L~~L~Ls~N~l~~~~p~~~~---~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L-- 215 (843)
+++.++.. +... ++|+.|+|++|+++ .+|.... ..+|+.|+|++|+|++ +|..+..+++|+.|+|
T Consensus 468 ~l~~i~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~-ip~~~~~l~~L~~L~Ls~ 545 (636)
T 4eco_A 468 MLTEIPKNSLKDENENFKNTYLLTSIDLRFNKLT-KLSDDFRATTLPYLVGIDLSYNSFSK-FPTQPLNSSTLKGFGIRN 545 (636)
T ss_dssp CCSBCCSSSSEETTEECTTGGGCCEEECCSSCCC-BCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCSSCCEEECCS
T ss_pred CCCCcCHHHhccccccccccCCccEEECcCCcCC-ccChhhhhccCCCcCEEECCCCCCCC-cChhhhcCCCCCEEECCC
Confidence 66655543 2222 26666666666666 5555443 2366666666666665 5666666666666666
Q ss_pred ----cCccCCCCCCchhhccccCCCCcceeEEcCCCCCCCCCCCCcCCCCcEEEeccCcccc
Q 003158 216 ----ANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGSFNIPPNVTVRLRGNPFCL 273 (843)
Q Consensus 216 ----~~N~l~~~~p~~~~~l~~l~~~~L~~L~l~~N~l~~~~~~~~~~~l~~l~l~~Np~~c 273 (843)
++|++.+.+|..+..+. +|+.|+|++|+|+.+|.... +.++.|++++||+.|
T Consensus 546 N~~ls~N~l~~~~p~~l~~l~-----~L~~L~Ls~N~l~~ip~~~~-~~L~~L~Ls~N~l~~ 601 (636)
T 4eco_A 546 QRDAQGNRTLREWPEGITLCP-----SLTQLQIGSNDIRKVNEKIT-PNISVLDIKDNPNIS 601 (636)
T ss_dssp CBCTTCCBCCCCCCTTGGGCS-----SCCEEECCSSCCCBCCSCCC-TTCCEEECCSCTTCE
T ss_pred CcccccCcccccChHHHhcCC-----CCCEEECCCCcCCccCHhHh-CcCCEEECcCCCCcc
Confidence 44556666666665543 34467777777777765543 677777777777765
No 273
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.96 E-value=7.2e-28 Score=262.53 Aligned_cols=256 Identities=24% Similarity=0.337 Sum_probs=157.2
Q ss_pred ccccccCCccccCCCCCCEEEccCCcCCccCccccCCCCCCcEEEcccCcCCccCccccccCCCCCEEEccCCccccCCC
Q 003158 3 NKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIP 82 (843)
Q Consensus 3 N~i~~~~p~~i~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~ 82 (843)
|+++ .+|..+. ++|++|+|++|++++..+..|+++++|++|+|++|++++..|..|.++++|++|+|++|.++ .+|
T Consensus 43 ~~l~-~ip~~~~--~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~ 118 (332)
T 2ft3_A 43 LGLK-AVPKEIS--PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLV-EIP 118 (332)
T ss_dssp SCCS-SCCSCCC--TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCSSCCC-SCC
T ss_pred CCcc-ccCCCCC--CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCCCcCC-ccC
Confidence 3444 4555443 46666666666666655666666666666666666666666666666666666666666666 344
Q ss_pred cccCCCCCCceeeccCCCCCCCCCcccCCCCCCcEEEcCCCCCCC-CCCCccccCCCCCcEEEcCCCCCCCCCCCCCCCC
Q 003158 83 PELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEG-TTIPASYSNMSKLLKLSLRNCSLQGPMPDLSRIP 161 (843)
Q Consensus 83 ~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~ 161 (843)
..+. ++|++|++++|+++...+..|.++++|++|+|++|.++. ...+..+..+ +|+.|++++|++++++..+. +
T Consensus 119 ~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~l~~~~~--~ 193 (332)
T 2ft3_A 119 PNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTGIPKDLP--E 193 (332)
T ss_dssp SSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSSCCSSSC--S
T ss_pred cccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCCccCcccc--C
Confidence 4333 566666666666665555556666666777776666642 1234555555 66666666666666555433 5
Q ss_pred CCCEEEcccCcCCCCCCCCCCC-cCcCEEEccCCcCCCCCCcccCCCCCCcEEeCcCccCCCCCCchhhccccCCCCcce
Q 003158 162 NLGYLDLSSNQLNGSIPPGRLS-LNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETF 240 (843)
Q Consensus 162 ~L~~L~Ls~N~l~~~~p~~~~~-~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~l~~~~L~ 240 (843)
+|+.|+|++|.+++..+..+.. .+|+.|+|++|.+++..+..|..+++|++|+|++|+|+ .+|..+..+. +|+
T Consensus 194 ~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~-----~L~ 267 (332)
T 2ft3_A 194 TLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLPDLK-----LLQ 267 (332)
T ss_dssp SCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTTGGGCT-----TCC
T ss_pred CCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChhhhcCc-----cCC
Confidence 6666777777766444333332 36677777777776666666666777777777777766 5666554433 344
Q ss_pred eEEcCCCCCCCCCCCC--------cCCCCcEEEeccCcccc
Q 003158 241 ILDFQNNNLTNISGSF--------NIPPNVTVRLRGNPFCL 273 (843)
Q Consensus 241 ~L~l~~N~l~~~~~~~--------~~~~l~~l~l~~Np~~c 273 (843)
.|++++|+|+.++... ..+.+..|++.+||+.+
T Consensus 268 ~L~l~~N~l~~~~~~~~~~~~~~~~~~~l~~L~l~~N~~~~ 308 (332)
T 2ft3_A 268 VVYLHTNNITKVGVNDFCPVGFGVKRAYYNGISLFNNPVPY 308 (332)
T ss_dssp EEECCSSCCCBCCTTSSSCSSCCSSSCCBSEEECCSSSSCG
T ss_pred EEECCCCCCCccChhHccccccccccccccceEeecCcccc
Confidence 6777777777665432 13456667777776653
No 274
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.96 E-value=9.1e-28 Score=261.47 Aligned_cols=257 Identities=21% Similarity=0.335 Sum_probs=182.7
Q ss_pred ccccccCCccccCCCCCCEEEccCCcCCccCccccCCCCCCcEEEcccCcCCccCccccccCCCCCEEEccCCccccCCC
Q 003158 3 NKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIP 82 (843)
Q Consensus 3 N~i~~~~p~~i~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~ 82 (843)
+.++ .+|..+. ++|++|+|++|++++..+..|+++++|++|+|++|.+++..|..|.++++|++|+|++|.++ .+|
T Consensus 41 ~~l~-~lp~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~ 116 (330)
T 1xku_A 41 LGLE-KVPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLK-ELP 116 (330)
T ss_dssp SCCC-SCCCSCC--TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCS-BCC
T ss_pred CCcc-ccCccCC--CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCCCcCC-ccC
Confidence 3444 4555443 57778888888888766667788888888888888887776777888888888888888877 445
Q ss_pred cccCCCCCCceeeccCCCCCCCCCcccCCCCCCcEEEcCCCCCCCC-CCCccccCCCCCcEEEcCCCCCCCCCCCCCCCC
Q 003158 83 PELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGT-TIPASYSNMSKLLKLSLRNCSLQGPMPDLSRIP 161 (843)
Q Consensus 83 ~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~ 161 (843)
..+. ++|++|++++|++++..+..|.++++|++|+|++|.+... ..+..+.++++|+.|++++|.++.++..+. +
T Consensus 117 ~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~l~~~~~--~ 192 (330)
T 1xku_A 117 EKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITTIPQGLP--P 192 (330)
T ss_dssp SSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCSCCSSCC--T
T ss_pred hhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCccccCCcccc--c
Confidence 4443 6788888888888766666777788888888888877421 345667777888888888888777666543 6
Q ss_pred CCCEEEcccCcCCCCCCCCCCC-cCcCEEEccCCcCCCCCCcccCCCCCCcEEeCcCccCCCCCCchhhccccCCCCcce
Q 003158 162 NLGYLDLSSNQLNGSIPPGRLS-LNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETF 240 (843)
Q Consensus 162 ~L~~L~Ls~N~l~~~~p~~~~~-~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~l~~~~L~ 240 (843)
+|+.|++++|.+++..+..+.. .+|+.|+|++|.+++..+..|..+++|++|+|++|+|+ .+|..+..+. +|+
T Consensus 193 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~-----~L~ 266 (330)
T 1xku_A 193 SLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHK-----YIQ 266 (330)
T ss_dssp TCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTTCS-----SCC
T ss_pred cCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCChhhccCC-----CcC
Confidence 7888888888877554444333 37888888888887777777777888888888888877 6676665443 455
Q ss_pred eEEcCCCCCCCCCCCC--------cCCCCcEEEeccCcccc
Q 003158 241 ILDFQNNNLTNISGSF--------NIPPNVTVRLRGNPFCL 273 (843)
Q Consensus 241 ~L~l~~N~l~~~~~~~--------~~~~l~~l~l~~Np~~c 273 (843)
.|++++|+|++++... ..+.+..|++.+||+.+
T Consensus 267 ~L~l~~N~i~~~~~~~f~~~~~~~~~~~l~~l~l~~N~~~~ 307 (330)
T 1xku_A 267 VVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQY 307 (330)
T ss_dssp EEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSCG
T ss_pred EEECCCCcCCccChhhcCCcccccccccccceEeecCcccc
Confidence 7888888888776533 13566777888888754
No 275
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.96 E-value=4e-28 Score=276.51 Aligned_cols=260 Identities=21% Similarity=0.273 Sum_probs=196.7
Q ss_pred CccccccCCccccCCCCCCEEEccCCcCCccCccccCCCCCCcEEEcccCcCCccC-ccccccCCCCCEEEccCCccccC
Q 003158 2 WNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSL-PKSFANLNKTRHFHMNNNSISGQ 80 (843)
Q Consensus 2 ~N~i~~~~p~~i~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~-~~~~~~l~~L~~L~Ls~N~l~~~ 80 (843)
+++++ .+|. +. ++|++|+|++|++++..|..|+++++|++|+|++|.+.+.+ +..|.++++|++|+|++|.+++.
T Consensus 19 ~~~l~-~lp~-l~--~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n~l~~~ 94 (455)
T 3v47_A 19 NRGLH-QVPE-LP--AHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFLQL 94 (455)
T ss_dssp SSCCS-SCCC-CC--TTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTCTTCEE
T ss_pred CCCcc-cCCC-CC--CccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCCCccCcc
Confidence 34555 5665 33 78999999999999988999999999999999999997544 67899999999999999999988
Q ss_pred CCcccCCCCCCceeeccCCCCCCCCCcc--cCCCCCCcEEEcCCCCCCCCCCCcc-ccCCCCCcEEEcCCCCCCCCCCC-
Q 003158 81 IPPELSRLPSLVHMLLDNNNLTGYLPPE--LSELPKLLILQLDNNNFEGTTIPAS-YSNMSKLLKLSLRNCSLQGPMPD- 156 (843)
Q Consensus 81 ~~~~l~~l~~L~~L~L~~N~l~~~~~~~--~~~l~~L~~L~Ls~N~l~~~~~~~~-~~~l~~L~~L~L~~N~l~~~~~~- 156 (843)
.|..|.++++|++|+|++|++++..+.. |..+++|++|+|++|++.+ ..|.. +.++++|+.|+|++|++++..+.
T Consensus 95 ~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 173 (455)
T 3v47_A 95 ETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKK-IQPASFFLNMRRFHVLDLTFNKVKSICEED 173 (455)
T ss_dssp CTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCS-CCCCGGGGGCTTCCEEECTTCCBSCCCTTT
T ss_pred ChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCc-cCcccccCCCCcccEEeCCCCcccccChhh
Confidence 8999999999999999999999755544 9999999999999999986 44655 89999999999999999987663
Q ss_pred CCC----------------------------------CCCCCEEEcccCcCCCCCCCCC---------------------
Q 003158 157 LSR----------------------------------IPNLGYLDLSSNQLNGSIPPGR--------------------- 181 (843)
Q Consensus 157 ~~~----------------------------------l~~L~~L~Ls~N~l~~~~p~~~--------------------- 181 (843)
+.. +++|+.|++++|++++.+|..+
T Consensus 174 l~~l~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~ 253 (455)
T 3v47_A 174 LLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMG 253 (455)
T ss_dssp SGGGTTCEEEEEECTTCBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTCTTTS
T ss_pred hhccccccccccccccCcccccchhhccccccccccccceeeeEecCCCcccccchhhhhccccccceeeEeeccccccc
Confidence 332 3567777777776653221100
Q ss_pred -------------------CCcCcCEEEccCCcCCCCCCcccCCCCCCcEEeCcCccCCCCCCchhhccccCCCCcceeE
Q 003158 182 -------------------LSLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFIL 242 (843)
Q Consensus 182 -------------------~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~l~~~~L~~L 242 (843)
...+|+.|+|++|.+++..|..|..+++|++|+|++|++++..|..+..+. +|+.|
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~-----~L~~L 328 (455)
T 3v47_A 254 SSFGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLT-----HLLKL 328 (455)
T ss_dssp CCTTCCSSCCCCTTTTGGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCT-----TCCEE
T ss_pred cccchhhhccCcccccccccccCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcc-----cCCEE
Confidence 012566667777777666666677777777777777777666666665443 33466
Q ss_pred EcCCCCCCCCCCCC--cCCCCcEEEeccCcc
Q 003158 243 DFQNNNLTNISGSF--NIPPNVTVRLRGNPF 271 (843)
Q Consensus 243 ~l~~N~l~~~~~~~--~~~~l~~l~l~~Np~ 271 (843)
+|++|+|++++... .++.++.|++++|.+
T Consensus 329 ~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l 359 (455)
T 3v47_A 329 NLSQNFLGSIDSRMFENLDKLEVLDLSYNHI 359 (455)
T ss_dssp ECCSSCCCEECGGGGTTCTTCCEEECCSSCC
T ss_pred ECCCCccCCcChhHhcCcccCCEEECCCCcc
Confidence 66666666654432 466666666666655
No 276
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.96 E-value=2.3e-28 Score=294.92 Aligned_cols=260 Identities=24% Similarity=0.307 Sum_probs=225.1
Q ss_pred cCCcccc--CCCCCCEEEccCCcCCccCccccCCCCCCcEEEcccCc-CCc-cCccccccCC-------CCCEEEccCCc
Q 003158 8 SIPKEIG--NIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNY-ISG-SLPKSFANLN-------KTRHFHMNNNS 76 (843)
Q Consensus 8 ~~p~~i~--~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~-l~~-~~~~~~~~l~-------~L~~L~Ls~N~ 76 (843)
.+|..++ ++++|++|+|++|++.+.+|..|+++++|++|+|++|+ +++ .+|..+.+++ +|+.|+|++|.
T Consensus 480 ~iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~ 559 (876)
T 4ecn_A 480 YENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNN 559 (876)
T ss_dssp HTTSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSC
T ss_pred cCChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCc
Confidence 4999988 99999999999999999999999999999999999998 998 7888777766 99999999999
Q ss_pred cccCCCc--ccCCCCCCceeeccCCCCCCCCCcccCCCCCCcEEEcCCCCCCCCCCCccccCCCC-CcEEEcCCCCCCCC
Q 003158 77 ISGQIPP--ELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSK-LLKLSLRNCSLQGP 153 (843)
Q Consensus 77 l~~~~~~--~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~-L~~L~L~~N~l~~~ 153 (843)
|+ .+|. .|.++++|+.|+|++|+++ .+| .|..+++|+.|+|++|++. .+|..+.++++ |+.|+|++|+++.+
T Consensus 560 L~-~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp-~~~~L~~L~~L~Ls~N~l~--~lp~~l~~l~~~L~~L~Ls~N~L~~l 634 (876)
T 4ecn_A 560 LE-EFPASASLQKMVKLGLLDCVHNKVR-HLE-AFGTNVKLTDLKLDYNQIE--EIPEDFCAFTDQVEGLGFSHNKLKYI 634 (876)
T ss_dssp CC-BCCCHHHHTTCTTCCEEECTTSCCC-BCC-CCCTTSEESEEECCSSCCS--CCCTTSCEECTTCCEEECCSSCCCSC
T ss_pred CC-ccCChhhhhcCCCCCEEECCCCCcc-cch-hhcCCCcceEEECcCCccc--cchHHHhhccccCCEEECcCCCCCcC
Confidence 99 8888 8999999999999999999 778 9999999999999999997 68989999999 99999999999987
Q ss_pred CCCCCCCC--CCCEEEcccCcCCCCCCCCC------CCcCcCEEEccCCcCCCCCCcccCCCCCCcEEeCcCccCCCCCC
Q 003158 154 MPDLSRIP--NLGYLDLSSNQLNGSIPPGR------LSLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIP 225 (843)
Q Consensus 154 ~~~~~~l~--~L~~L~Ls~N~l~~~~p~~~------~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p 225 (843)
+..+..+. +|+.|+|++|++++.+|... ...+|+.|+|++|.|+...+..+..+++|+.|+|++|+|+ .+|
T Consensus 635 p~~~~~~~~~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~~lp~~~~~~l~~L~~L~Ls~N~L~-~ip 713 (876)
T 4ecn_A 635 PNIFNAKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQKFPTELFATGSPISTIILSNNLMT-SIP 713 (876)
T ss_dssp CSCCCTTCSSCEEEEECCSSCTTTTSSSCSSCTTTCCCCCEEEEECCSSCCCSCCHHHHHTTCCCSEEECCSCCCS-CCC
T ss_pred chhhhccccCCCCEEECcCCcCCCccccchhhhccccCCCcCEEEccCCcCCccCHHHHccCCCCCEEECCCCcCC-ccC
Confidence 76666665 49999999999998776533 1237999999999999544444568999999999999999 777
Q ss_pred chhhcccc--C-CCCcceeEEcCCCCCCCCCCCC---cCCCCcEEEeccCcccc
Q 003158 226 SSIWQSRT--L-NATETFILDFQNNNLTNISGSF---NIPPNVTVRLRGNPFCL 273 (843)
Q Consensus 226 ~~~~~l~~--l-~~~~L~~L~l~~N~l~~~~~~~---~~~~l~~l~l~~Np~~c 273 (843)
..+..... + ++++|+.|+|++|+|+.++... .++.|+.|+|++|.+..
T Consensus 714 ~~~~~~~~~~l~nl~~L~~L~Ls~N~L~~lp~~l~~~~l~~L~~L~Ls~N~L~~ 767 (876)
T 4ecn_A 714 ENSLKPKDGNYKNTYLLTTIDLRFNKLTSLSDDFRATTLPYLSNMDVSYNCFSS 767 (876)
T ss_dssp TTSSSCTTSCCTTGGGCCEEECCSSCCCCCCGGGSTTTCTTCCEEECCSSCCSS
T ss_pred hHHhccccccccccCCccEEECCCCCCccchHHhhhccCCCcCEEEeCCCCCCc
Confidence 76654321 0 2337889999999999998765 68999999999998763
No 277
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.96 E-value=4.3e-29 Score=269.64 Aligned_cols=242 Identities=26% Similarity=0.479 Sum_probs=215.3
Q ss_pred Cccccc--cCCccccCCCCCCEEEccC-CcCCccCccccCCCCCCcEEEcccCcCCccCccccccCCCCCEEEccCCccc
Q 003158 2 WNKISG--SIPKEIGNIKSLELLLLNG-NELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSIS 78 (843)
Q Consensus 2 ~N~i~~--~~p~~i~~l~~L~~L~L~~-n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 78 (843)
+|+++| .+|..|.++++|++|+|++ |++.+.+|..|+++++|++|+|++|.+++.+|..|.++++|++|+|++|.++
T Consensus 59 ~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 138 (313)
T 1ogq_A 59 GLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALS 138 (313)
T ss_dssp CCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEE
T ss_pred CCCccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccC
Confidence 578888 8999999999999999995 9999899999999999999999999999899999999999999999999999
Q ss_pred cCCCcccCCCCCCceeeccCCCCCCCCCcccCCCC-CCcEEEcCCCCCCCCCCCccccCCCCCcEEEcCCCCCCCCCC-C
Q 003158 79 GQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELP-KLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMP-D 156 (843)
Q Consensus 79 ~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~-~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~ 156 (843)
+.+|..+..+++|++|+|++|++++.+|..+..++ +|++|+|++|++++ .+|..+..++ |+.|+|++|.+++.++ .
T Consensus 139 ~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~-~~~~~~~~l~-L~~L~Ls~N~l~~~~~~~ 216 (313)
T 1ogq_A 139 GTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTG-KIPPTFANLN-LAFVDLSRNMLEGDASVL 216 (313)
T ss_dssp SCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEE-ECCGGGGGCC-CSEEECCSSEEEECCGGG
T ss_pred CcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeec-cCChHHhCCc-ccEEECcCCcccCcCCHH
Confidence 88999999999999999999999988999999998 99999999999986 6788888887 9999999999998777 4
Q ss_pred CCCCCCCCEEEcccCcCCCCCCCCCCCcCcCEEEccCCcCCCCCCcccCCCCCCcEEeCcCccCCCCCCchhhccccCCC
Q 003158 157 LSRIPNLGYLDLSSNQLNGSIPPGRLSLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNA 236 (843)
Q Consensus 157 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~l~~ 236 (843)
+..+++|+.|+|++|.+++.+|......+|+.|+|++|.|++.+|..|..+++|+.|+|++|+|+|.+|.. ..+
T Consensus 217 ~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~-~~l----- 290 (313)
T 1ogq_A 217 FGSDKNTQKIHLAKNSLAFDLGKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQG-GNL----- 290 (313)
T ss_dssp CCTTSCCSEEECCSSEECCBGGGCCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCS-TTG-----
T ss_pred HhcCCCCCEEECCCCceeeecCcccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCCCC-ccc-----
Confidence 88999999999999999877777555568999999999999999999999999999999999999988876 444
Q ss_pred CcceeEEcCCCC-CCC
Q 003158 237 TETFILDFQNNN-LTN 251 (843)
Q Consensus 237 ~~L~~L~l~~N~-l~~ 251 (843)
++|+.|++++|. +.+
T Consensus 291 ~~L~~l~l~~N~~lc~ 306 (313)
T 1ogq_A 291 QRFDVSAYANNKCLCG 306 (313)
T ss_dssp GGSCGGGTCSSSEEES
T ss_pred cccChHHhcCCCCccC
Confidence 455589999997 544
No 278
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.95 E-value=3.3e-28 Score=284.16 Aligned_cols=122 Identities=20% Similarity=0.301 Sum_probs=85.8
Q ss_pred CCCCCCCCEEEcccCcCCCCCCCCCCC-cCcCEEEccCCcCCCCCCc-----------------ccCCCCCCcEEeCcCc
Q 003158 157 LSRIPNLGYLDLSSNQLNGSIPPGRLS-LNITTIKLSNNKLTGTIPS-----------------NFSGLPRLQRLFIANN 218 (843)
Q Consensus 157 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~-~~L~~L~Ls~N~l~~~~p~-----------------~~~~l~~L~~L~L~~N 218 (843)
+..+++|+.|+|++|+++ .+|..... .+|+.|+|++|.|+..... .+..+++|++|+|++|
T Consensus 383 ~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~~L~~L~Ls~N~l~~l~~~~~~~L~~L~Ls~N~l~~~~~~l~~L~~L~Ls~N 461 (549)
T 2z81_A 383 LLTLKNLTSLDISRNTFH-PMPDSCQWPEKMRFLNLSSTGIRVVKTCIPQTLEVLDVSNNNLDSFSLFLPRLQELYISRN 461 (549)
T ss_dssp GGGCTTCCEEECTTCCCC-CCCSCCCCCTTCCEEECTTSCCSCCCTTSCTTCSEEECCSSCCSCCCCCCTTCCEEECCSS
T ss_pred hhcCCCCCEEECCCCCCc-cCChhhcccccccEEECCCCCcccccchhcCCceEEECCCCChhhhcccCChhcEEECCCC
Confidence 455667777777777776 45544332 2555555555555421111 1247889999999999
Q ss_pred cCCCCCCchhhccccCCCCcceeEEcCCCCCCCCCCCC--cCCCCcEEEeccCcccccCC-cccccCCCCC
Q 003158 219 SLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGSF--NIPPNVTVRLRGNPFCLNTN-AEQFCGSHSD 286 (843)
Q Consensus 219 ~l~~~~p~~~~~l~~l~~~~L~~L~l~~N~l~~~~~~~--~~~~l~~l~l~~Np~~c~~~-~~~~~~~~~~ 286 (843)
+|+ .+|.. .. .++|+.|+|++|+|+++++.. .++.++.|++++|||.|+|. ..++..|+..
T Consensus 462 ~l~-~ip~~-~~-----l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~~~~l~~~l~~ 525 (549)
T 2z81_A 462 KLK-TLPDA-SL-----FPVLLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRIDYLSRWLNK 525 (549)
T ss_dssp CCS-SCCCG-GG-----CTTCCEEECCSSCCCCCCTTGGGGCTTCCEEECCSSCBCCCHHHHHHHHHHHHH
T ss_pred ccC-cCCCc-cc-----CccCCEEecCCCccCCcCHHHHhcCcccCEEEecCCCccCCCccHHHHHHHHHh
Confidence 998 67763 22 457789999999999998763 79999999999999999998 4556567644
No 279
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.95 E-value=2.3e-27 Score=258.24 Aligned_cols=261 Identities=20% Similarity=0.291 Sum_probs=221.5
Q ss_pred CccccccCCccccCCCCCCEEEccCCcCCccCccccCCCCCCcEEEcccCcCCccCccccccCCCCCEEEccCCccccCC
Q 003158 2 WNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQI 81 (843)
Q Consensus 2 ~N~i~~~~p~~i~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 81 (843)
+|+|++..+..|.++++|++|+|++|++++..|..|+++++|++|+|++|+++ .+|..+. ++|++|++++|.+++..
T Consensus 61 ~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~ 137 (330)
T 1xku_A 61 NNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLK-ELPEKMP--KTLQELRVHENEITKVR 137 (330)
T ss_dssp SSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCS-BCCSSCC--TTCCEEECCSSCCCBBC
T ss_pred CCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCCCcCC-ccChhhc--ccccEEECCCCcccccC
Confidence 68999888889999999999999999999888999999999999999999999 5665554 79999999999999888
Q ss_pred CcccCCCCCCceeeccCCCCCC--CCCcccCCCCCCcEEEcCCCCCCCCCCCccccCCCCCcEEEcCCCCCCCCCC-CCC
Q 003158 82 PPELSRLPSLVHMLLDNNNLTG--YLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMP-DLS 158 (843)
Q Consensus 82 ~~~l~~l~~L~~L~L~~N~l~~--~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~ 158 (843)
+..|.++++|+.|+|++|+++. ..+..+.++++|++|++++|.+. .+|..+. ++|+.|+|++|++++.++ .+.
T Consensus 138 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~--~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~ 213 (330)
T 1xku_A 138 KSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNIT--TIPQGLP--PSLTELHLDGNKITKVDAASLK 213 (330)
T ss_dssp HHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCC--SCCSSCC--TTCSEEECTTSCCCEECTGGGT
T ss_pred HhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCccc--cCCcccc--ccCCEEECCCCcCCccCHHHhc
Confidence 8889999999999999999973 67888999999999999999997 4666554 899999999999999876 599
Q ss_pred CCCCCCEEEcccCcCCCCCCCCCCC-cCcCEEEccCCcCCCCCCcccCCCCCCcEEeCcCccCCCCCCchhhcccc-CCC
Q 003158 159 RIPNLGYLDLSSNQLNGSIPPGRLS-LNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRT-LNA 236 (843)
Q Consensus 159 ~l~~L~~L~Ls~N~l~~~~p~~~~~-~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~-l~~ 236 (843)
.+++|+.|+|++|.+++..+..+.. .+|+.|+|++|.++ .+|..+..+++|++|+|++|+|++..+..|..... ...
T Consensus 214 ~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~i~~~~~~~f~~~~~~~~~ 292 (330)
T 1xku_A 214 GLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKK 292 (330)
T ss_dssp TCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTTCSSCCEEECCSSCCCCCCTTSSSCSSCCTTS
T ss_pred CCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCChhhccCCCcCEEECCCCcCCccChhhcCCccccccc
Confidence 9999999999999999655544433 48999999999999 78889999999999999999999777776654422 234
Q ss_pred CcceeEEcCCCCCCCCC--C-CC-cCCCCcEEEeccCc
Q 003158 237 TETFILDFQNNNLTNIS--G-SF-NIPPNVTVRLRGNP 270 (843)
Q Consensus 237 ~~L~~L~l~~N~l~~~~--~-~~-~~~~l~~l~l~~Np 270 (843)
+.|+.|++++|.+.... + .+ .+..++.+++++|.
T Consensus 293 ~~l~~l~l~~N~~~~~~i~~~~f~~~~~l~~l~L~~N~ 330 (330)
T 1xku_A 293 ASYSGVSLFSNPVQYWEIQPSTFRCVYVRAAVQLGNYK 330 (330)
T ss_dssp CCCSEEECCSSSSCGGGSCGGGGTTCCCGGGEEC----
T ss_pred ccccceEeecCcccccccCccccccccceeEEEecccC
Confidence 67889999999998643 2 22 57778888888873
No 280
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.95 E-value=6.6e-28 Score=261.95 Aligned_cols=228 Identities=21% Similarity=0.287 Sum_probs=208.5
Q ss_pred CCCCCEEEccCCcCCccCccccCCCCCCcEEEcccCcCCccCccccccCCCCCEEEccCCccccCCCcccCCCCCCceee
Q 003158 16 IKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHML 95 (843)
Q Consensus 16 l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~ 95 (843)
..+++.|+|++|+++ .+|..++++++|++|+|++|.++ .+|..+.++++|++|+|++|.++ .+|..+.++++|++|+
T Consensus 80 ~~~l~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~ 156 (328)
T 4fcg_A 80 QPGRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELS 156 (328)
T ss_dssp STTCCEEEEESSCCS-SCCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEE
T ss_pred ccceeEEEccCCCch-hcChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEE
Confidence 478999999999999 88888999999999999999999 88999999999999999999999 7899999999999999
Q ss_pred ccCCCCCCCCCcccCC---------CCCCcEEEcCCCCCCCCCCCccccCCCCCcEEEcCCCCCCCCCCCCCCCCCCCEE
Q 003158 96 LDNNNLTGYLPPELSE---------LPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYL 166 (843)
Q Consensus 96 L~~N~l~~~~~~~~~~---------l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L 166 (843)
|++|++.+.+|..+.. +++|++|+|++|+++ .+|..+.++++|+.|+|++|+++++++.+..+++|+.|
T Consensus 157 L~~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~--~lp~~l~~l~~L~~L~L~~N~l~~l~~~l~~l~~L~~L 234 (328)
T 4fcg_A 157 IRACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR--SLPASIANLQNLKSLKIRNSPLSALGPAIHHLPKLEEL 234 (328)
T ss_dssp EEEETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCC--CCCGGGGGCTTCCEEEEESSCCCCCCGGGGGCTTCCEE
T ss_pred CCCCCCccccChhHhhccchhhhccCCCCCEEECcCCCcC--cchHhhcCCCCCCEEEccCCCCCcCchhhccCCCCCEE
Confidence 9999999899987765 999999999999997 67899999999999999999999988889999999999
Q ss_pred EcccCcCCCCCCCCCCC-cCcCEEEccCCcCCCCCCcccCCCCCCcEEeCcCccCCCCCCchhhccccCCCCcceeEEcC
Q 003158 167 DLSSNQLNGSIPPGRLS-LNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQ 245 (843)
Q Consensus 167 ~Ls~N~l~~~~p~~~~~-~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~l~~~~L~~L~l~ 245 (843)
+|++|.+.+.+|..+.. .+|+.|+|++|.+.+.+|..+.++++|++|+|++|++.+.+|..+..+.++ +.+++.
T Consensus 235 ~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~L~~L-----~~l~l~ 309 (328)
T 4fcg_A 235 DLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPAN-----CIILVP 309 (328)
T ss_dssp ECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGGGSCTT-----CEEECC
T ss_pred ECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHhhccCc-----eEEeCC
Confidence 99999999999886654 489999999999999999999999999999999999999999999877654 478888
Q ss_pred CCCCCCCC
Q 003158 246 NNNLTNIS 253 (843)
Q Consensus 246 ~N~l~~~~ 253 (843)
.|.+..++
T Consensus 310 ~~~~~~l~ 317 (328)
T 4fcg_A 310 PHLQAQLD 317 (328)
T ss_dssp GGGSCC--
T ss_pred HHHHHHHh
Confidence 87776654
No 281
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.95 E-value=1.8e-27 Score=259.36 Aligned_cols=260 Identities=20% Similarity=0.294 Sum_probs=221.7
Q ss_pred CccccccCCccccCCCCCCEEEccCCcCCccCccccCCCCCCcEEEcccCcCCccCccccccCCCCCEEEccCCccccCC
Q 003158 2 WNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQI 81 (843)
Q Consensus 2 ~N~i~~~~p~~i~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 81 (843)
+|+|++..|..|.++++|++|+|++|++++..|..|+++++|++|+|++|+++ .+|..+. ++|++|++++|.++...
T Consensus 63 ~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~--~~L~~L~l~~n~i~~~~ 139 (332)
T 2ft3_A 63 NNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLV-EIPPNLP--SSLVELRIHDNRIRKVP 139 (332)
T ss_dssp SSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCSSCCC-SCCSSCC--TTCCEEECCSSCCCCCC
T ss_pred CCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCCCcCC-ccCcccc--ccCCEEECCCCccCccC
Confidence 68899888889999999999999999999988999999999999999999999 5665554 89999999999999777
Q ss_pred CcccCCCCCCceeeccCCCCC--CCCCcccCCCCCCcEEEcCCCCCCCCCCCccccCCCCCcEEEcCCCCCCCCCC-CCC
Q 003158 82 PPELSRLPSLVHMLLDNNNLT--GYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMP-DLS 158 (843)
Q Consensus 82 ~~~l~~l~~L~~L~L~~N~l~--~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~ 158 (843)
+..|.++++|+.|++++|.++ +..+..+..+ +|++|++++|++++ +|..+. ++|+.|+|++|.+++.++ .+.
T Consensus 140 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~--l~~~~~--~~L~~L~l~~n~i~~~~~~~l~ 214 (332)
T 2ft3_A 140 KGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTG--IPKDLP--ETLNELHLDHNKIQAIELEDLL 214 (332)
T ss_dssp SGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSS--CCSSSC--SSCSCCBCCSSCCCCCCTTSST
T ss_pred HhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCCc--cCcccc--CCCCEEECCCCcCCccCHHHhc
Confidence 778999999999999999996 4778888888 99999999999974 666554 799999999999999886 599
Q ss_pred CCCCCCEEEcccCcCCCCCCCCCC-CcCcCEEEccCCcCCCCCCcccCCCCCCcEEeCcCccCCCCCCchhhccc-cCCC
Q 003158 159 RIPNLGYLDLSSNQLNGSIPPGRL-SLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSR-TLNA 236 (843)
Q Consensus 159 ~l~~L~~L~Ls~N~l~~~~p~~~~-~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~-~l~~ 236 (843)
.+++|+.|+|++|++++..+..+. ..+|+.|+|++|.++ .+|..+..+++|+.|+|++|+|++..+..+.... ....
T Consensus 215 ~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~ 293 (332)
T 2ft3_A 215 RYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYLHTNNITKVGVNDFCPVGFGVKR 293 (332)
T ss_dssp TCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTTGGGCTTCCEEECCSSCCCBCCTTSSSCSSCCSSS
T ss_pred CCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChhhhcCccCCEEECCCCCCCccChhHcccccccccc
Confidence 999999999999999965554443 348999999999999 7888899999999999999999977777776542 1225
Q ss_pred CcceeEEcCCCCCC--CCCCC-C-cCCCCcEEEeccCc
Q 003158 237 TETFILDFQNNNLT--NISGS-F-NIPPNVTVRLRGNP 270 (843)
Q Consensus 237 ~~L~~L~l~~N~l~--~~~~~-~-~~~~l~~l~l~~Np 270 (843)
+.|+.|++++|.+. .+++. + .++.++.+++.+|.
T Consensus 294 ~~l~~L~l~~N~~~~~~~~~~~~~~l~~L~~l~l~~n~ 331 (332)
T 2ft3_A 294 AYYNGISLFNNPVPYWEVQPATFRCVTDRLAIQFGNYK 331 (332)
T ss_dssp CCBSEEECCSSSSCGGGSCGGGGTTBCCSTTEEC----
T ss_pred ccccceEeecCcccccccCcccccccchhhhhhccccc
Confidence 67889999999998 44443 2 68889999998874
No 282
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.95 E-value=1.4e-27 Score=273.68 Aligned_cols=260 Identities=20% Similarity=0.271 Sum_probs=201.9
Q ss_pred ccccccCCccccCCCCCCEEEccCCcCCccCccccCCCCCCcEEEcccCcCCccCccccccCCCCCEEEccCCccccCCC
Q 003158 3 NKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIP 82 (843)
Q Consensus 3 N~i~~~~p~~i~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~ 82 (843)
++++ .+|..+. .+|+.|+|++|+|++..+..|.++++|++|+|++|.+++..|..|.++++|+.|+|++|+|+...+
T Consensus 21 ~~l~-~ip~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~ 97 (477)
T 2id5_A 21 KRFV-AVPEGIP--TETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPL 97 (477)
T ss_dssp CCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCSCCT
T ss_pred CCcC-cCCCCCC--CCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCCccCc
Confidence 4566 6777664 689999999999999889999999999999999999998889999999999999999999997777
Q ss_pred cccCCCCCCceeeccCCCCCCCCCcccCCCCCCcEEEcCCCCCCCCCCCccccCCCCCcEEEcCCCCCCCCCCC-CCCCC
Q 003158 83 PELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMPD-LSRIP 161 (843)
Q Consensus 83 ~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~ 161 (843)
..|.++++|++|+|++|++++..+..|..+++|++|+|++|.+.+ ..+..|.++++|+.|+|++|+++++++. +..++
T Consensus 98 ~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~-~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~ 176 (477)
T 2id5_A 98 GVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVY-ISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLH 176 (477)
T ss_dssp TSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCE-ECTTSSTTCTTCCEEEEESCCCSSCCHHHHTTCT
T ss_pred ccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccce-eChhhccCCCCCCEEECCCCcCcccChhHhcccC
Confidence 789999999999999999998889999999999999999999986 4577899999999999999999998874 89999
Q ss_pred CCCEEEcccCcCCCCCCCCCCC-cCcCEEEccCCcCCCCCCcccCCCCCCcEEeCcCccCCCCCCchhhccccCCCCcce
Q 003158 162 NLGYLDLSSNQLNGSIPPGRLS-LNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETF 240 (843)
Q Consensus 162 ~L~~L~Ls~N~l~~~~p~~~~~-~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~l~~~~L~ 240 (843)
+|+.|+|++|.+++..+..+.. .+|+.|+|++|.+.+.+|..+....+|++|+|++|+|++..+..+..+ ++|+
T Consensus 177 ~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l-----~~L~ 251 (477)
T 2id5_A 177 GLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHL-----VYLR 251 (477)
T ss_dssp TCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCCSCCHHHHTTC-----TTCC
T ss_pred CCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccccccCcccccCccccEEECcCCcccccCHHHhcCc-----cccC
Confidence 9999999999999654444333 378888877766555555444444455555555555553222233322 2333
Q ss_pred eEEcCCCCCCCCCCCC--cCCCCcEEEeccCcc
Q 003158 241 ILDFQNNNLTNISGSF--NIPPNVTVRLRGNPF 271 (843)
Q Consensus 241 ~L~l~~N~l~~~~~~~--~~~~l~~l~l~~Np~ 271 (843)
.|+|++|+|+.++... .++.|+.|++++|.+
T Consensus 252 ~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l 284 (477)
T 2id5_A 252 FLNLSYNPISTIEGSMLHELLRLQEIQLVGGQL 284 (477)
T ss_dssp EEECCSSCCCEECTTSCTTCTTCCEEECCSSCC
T ss_pred eeECCCCcCCccChhhccccccCCEEECCCCcc
Confidence 4555555555544432 444555555555443
No 283
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.95 E-value=1.2e-29 Score=294.71 Aligned_cols=185 Identities=18% Similarity=0.109 Sum_probs=129.8
Q ss_pred cccccCCeeEEEEE-eCCCcEEEEEEeccCC----------hhhHHHHHHHHHHHHhc-cCCcccceeeeeecCCcEEEE
Q 003158 518 QIGQGGYGKVYKGI-LPDGTVVAVKRAQEGS----------LQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQMLV 585 (843)
Q Consensus 518 ~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~----------~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~lV 585 (843)
..+.|++|.+..++ .--|+.||+|++.... ....++|.+|+++|+++ .|+||+++++++.+++..|||
T Consensus 241 ~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLV 320 (569)
T 4azs_A 241 QPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLV 320 (569)
T ss_dssp C-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEE
T ss_pred ccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEE
Confidence 35667777666655 2358899999987532 12235799999999999 799999999999999999999
Q ss_pred EecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCC
Q 003158 586 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVP 665 (843)
Q Consensus 586 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~ 665 (843)
|||++|++|.++|.+.+ +++.. +|+.||+.||+|+|++| ||||||||+|||++++|.+||+|||+|+.....
T Consensus 321 MEyv~G~~L~d~i~~~~--~l~~~---~I~~QIl~AL~ylH~~G---IIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~ 392 (569)
T 4azs_A 321 MEKLPGRLLSDMLAAGE--EIDRE---KILGSLLRSLAALEKQG---FWHDDVRPWNVMVDARQHARLIDFGSIVTTPQD 392 (569)
T ss_dssp EECCCSEEHHHHHHTTC--CCCHH---HHHHHHHHHHHHHHHTT---CEESCCCGGGEEECTTSCEEECCCTTEESCC--
T ss_pred EecCCCCcHHHHHHhCC--CCCHH---HHHHHHHHHHHHHHHCC---ceeccCchHhEEECCCCCEEEeecccCeeCCCC
Confidence 99999999999997654 35443 58899999999999999 999999999999999999999999999865432
Q ss_pred CCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCC
Q 003158 666 DIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQP 718 (843)
Q Consensus 666 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~p 718 (843)
. .......||+.|||||++.+. +..++|+||+|++++++.++..+
T Consensus 393 ~-------~~~~t~vGTp~YmAPE~l~g~-~~~~~d~~s~g~~~~~l~~~~~~ 437 (569)
T 4azs_A 393 C-------SWPTNLVQSFFVFVNELFAEN-KSWNGFWRSAPVHPFNLPQPWSN 437 (569)
T ss_dssp --------CCSHHHHHHHHHHHHHHC------------------CCCCTTHHH
T ss_pred C-------ccccCceechhhccHHHhCCC-CCCcccccccccchhhhccccch
Confidence 1 223456799999999999764 56789999999999887765433
No 284
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.95 E-value=1.8e-27 Score=253.54 Aligned_cols=237 Identities=21% Similarity=0.248 Sum_probs=173.7
Q ss_pred CCEEEccCCcCCccCccccCCCCCCcEEEcccCcCCccCccccccCCCCCEEEccCCccccCCCcccCCCCCCceeeccC
Q 003158 19 LELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDN 98 (843)
Q Consensus 19 L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~ 98 (843)
-+.++.+++.++ .+|..+ .++|++|+|++|.+++..+..|..+++|++|+|++|.+++..+..|.++++|++|+|++
T Consensus 13 ~~~~~c~~~~l~-~ip~~~--~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 89 (285)
T 1ozn_A 13 KVTTSCPQQGLQ-AVPVGI--PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSD 89 (285)
T ss_dssp SCEEECCSSCCS-SCCTTC--CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CeEEEcCcCCcc-cCCcCC--CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCC
Confidence 367888888888 556543 46888888888888877777788888888888888888877777888888888888888
Q ss_pred CC-CCCCCCcccCCCCCCcEEEcCCCCCCCCCCCccccCCCCCcEEEcCCCCCCCCCCC-CCCCCCCCEEEcccCcCCCC
Q 003158 99 NN-LTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMPD-LSRIPNLGYLDLSSNQLNGS 176 (843)
Q Consensus 99 N~-l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~ 176 (843)
|+ ++...+..|..+++|++|+|++|++.+ ..+..+.++++|++|+|++|+++++++. +..+++|+.|+|++|++++.
T Consensus 90 n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~-~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~ 168 (285)
T 1ozn_A 90 NAQLRSVDPATFHGLGRLHTLHLDRCGLQE-LGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSV 168 (285)
T ss_dssp CTTCCCCCTTTTTTCTTCCEEECTTSCCCC-CCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEE
T ss_pred CCCccccCHHHhcCCcCCCEEECCCCcCCE-ECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCccccc
Confidence 86 776667778888888888888888875 4466778888888888888888877764 77778888888888877732
Q ss_pred CCCCCC-CcCcCEEEccCCcCCCCCCcccCCCCCCcEEeCcCccCCCCCCchhhccccCCCCcceeEEcCCCCCCCCCCC
Q 003158 177 IPPGRL-SLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGS 255 (843)
Q Consensus 177 ~p~~~~-~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~l~~~~L~~L~l~~N~l~~~~~~ 255 (843)
.+..+. ..+|+.|+|++|.+++..|..|..+++|+.|+|++|++++..+..+.
T Consensus 169 ~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~-------------------------- 222 (285)
T 1ozn_A 169 PERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALA-------------------------- 222 (285)
T ss_dssp CTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHT--------------------------
T ss_pred CHHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcc--------------------------
Confidence 222222 23566666666666666666666666666666666666643333332
Q ss_pred CcCCCCcEEEeccCcccccCCcccccCCCCC
Q 003158 256 FNIPPNVTVRLRGNPFCLNTNAEQFCGSHSD 286 (843)
Q Consensus 256 ~~~~~l~~l~l~~Np~~c~~~~~~~~~~~~~ 286 (843)
.++.++.|++++|||.|+|...++..|+..
T Consensus 223 -~l~~L~~L~l~~N~~~c~~~~~~~~~~l~~ 252 (285)
T 1ozn_A 223 -PLRALQYLRLNDNPWVCDCRARPLWAWLQK 252 (285)
T ss_dssp -TCTTCCEEECCSSCEECSGGGHHHHHHHHH
T ss_pred -cCcccCEEeccCCCccCCCCcHHHHHHHHh
Confidence 356778899999999999999888888753
No 285
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.95 E-value=3.2e-27 Score=279.32 Aligned_cols=249 Identities=21% Similarity=0.241 Sum_probs=220.5
Q ss_pred CCCEEEccCCcCCccCccccCCCCCCcEEEcccCcCCccCccccccCCCCCEEEccCCccccCCCcccCCCCCCceeecc
Q 003158 18 SLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLD 97 (843)
Q Consensus 18 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~ 97 (843)
+|+.|++++|.+++..+..|+++++|++|+|++|+++ .+|..+.++++|++|++++|.+++..|..+..+++|++|+++
T Consensus 255 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 333 (606)
T 3t6q_A 255 SVESINLQKHYFFNISSNTFHCFSGLQELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIK 333 (606)
T ss_dssp EEEEEECTTCCCSSCCTTTTTTCTTCSEEECTTSCCS-CCCSSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTCSEEECC
T ss_pred ceeEEEeecCccCccCHHHhccccCCCEEeccCCccC-CCChhhcccccCCEEECccCCcCcCchhhhhccCcCCEEECC
Confidence 7999999999999888889999999999999999999 788899999999999999999998888899999999999999
Q ss_pred CCCCCCCCCc-ccCCCCCCcEEEcCCCCCCCCCC--CccccCCCCCcEEEcCCCCCCCCCC-CCCCCCCCCEEEcccCcC
Q 003158 98 NNNLTGYLPP-ELSELPKLLILQLDNNNFEGTTI--PASYSNMSKLLKLSLRNCSLQGPMP-DLSRIPNLGYLDLSSNQL 173 (843)
Q Consensus 98 ~N~l~~~~~~-~~~~l~~L~~L~Ls~N~l~~~~~--~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~Ls~N~l 173 (843)
+|.+.+.++. .+..+++|++|+|++|.+.+ .. +..+.++++|+.|+|++|++++.++ .+..+++|+.|++++|++
T Consensus 334 ~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~-~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l 412 (606)
T 3t6q_A 334 GNTKRLELGTGCLENLENLRELDLSHDDIET-SDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRL 412 (606)
T ss_dssp SCSSCCBCCSSTTTTCTTCCEEECCSSCCCE-EEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCE
T ss_pred CCCcccccchhhhhccCcCCEEECCCCcccc-ccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcC
Confidence 9999866654 59999999999999999975 33 6789999999999999999998877 589999999999999999
Q ss_pred CCCCCCCCC--CcCcCEEEccCCcCCCCCCcccCCCCCCcEEeCcCccCCCC---CCchhhccccCCCCcceeEEcCCCC
Q 003158 174 NGSIPPGRL--SLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGS---IPSSIWQSRTLNATETFILDFQNNN 248 (843)
Q Consensus 174 ~~~~p~~~~--~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~---~p~~~~~l~~l~~~~L~~L~l~~N~ 248 (843)
++..+...+ ..+|+.|+|++|.+++..|..|.++++|++|+|++|++++. .+..+..+ ++|+.|++++|+
T Consensus 413 ~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l-----~~L~~L~Ls~n~ 487 (606)
T 3t6q_A 413 KVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTL-----GRLEILVLSFCD 487 (606)
T ss_dssp ECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGC-----TTCCEEECTTSC
T ss_pred CCcccchhhhCcccCCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccC-----CCccEEECCCCc
Confidence 977665433 34899999999999999999999999999999999999873 23445544 456699999999
Q ss_pred CCCCCCCC--cCCCCcEEEeccCcccc
Q 003158 249 LTNISGSF--NIPPNVTVRLRGNPFCL 273 (843)
Q Consensus 249 l~~~~~~~--~~~~l~~l~l~~Np~~c 273 (843)
++++++.. .++.++.|++++|.+..
T Consensus 488 l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 514 (606)
T 3t6q_A 488 LSSIDQHAFTSLKMMNHVDLSHNRLTS 514 (606)
T ss_dssp CCEECTTTTTTCTTCCEEECCSSCCCG
T ss_pred cCccChhhhccccCCCEEECCCCccCc
Confidence 99986543 78999999999998764
No 286
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.95 E-value=1.1e-27 Score=277.83 Aligned_cols=115 Identities=22% Similarity=0.245 Sum_probs=68.0
Q ss_pred CCCCCCCEEEcccCcCCCCCCCCCCC-cCcCEEEccCCcCCC--CCCcccCCCCCCcEEeCcCccCCCCCCch-hhcccc
Q 003158 158 SRIPNLGYLDLSSNQLNGSIPPGRLS-LNITTIKLSNNKLTG--TIPSNFSGLPRLQRLFIANNSLSGSIPSS-IWQSRT 233 (843)
Q Consensus 158 ~~l~~L~~L~Ls~N~l~~~~p~~~~~-~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~L~~N~l~~~~p~~-~~~l~~ 233 (843)
..+++|+.|++++|++++.+|..+.. .+|+.|+|++|++++ .+|..+..+++|++|+|++|.+++.+|.. +..+.+
T Consensus 321 ~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~ 400 (520)
T 2z7x_B 321 SKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKS 400 (520)
T ss_dssp SSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTT
T ss_pred hhCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCcc
Confidence 45666777777777776655554433 367777777777765 34456666777777777777766545543 222211
Q ss_pred CC-----------------CCcceeEEcCCCCCCCCCCCC-cCCCCcEEEeccCccc
Q 003158 234 LN-----------------ATETFILDFQNNNLTNISGSF-NIPPNVTVRLRGNPFC 272 (843)
Q Consensus 234 l~-----------------~~~L~~L~l~~N~l~~~~~~~-~~~~l~~l~l~~Np~~ 272 (843)
|+ .++|+.|+|++|+|+.+|... .++.++.|++++|.+.
T Consensus 401 L~~L~Ls~N~l~~~~~~~l~~~L~~L~Ls~N~l~~ip~~~~~l~~L~~L~L~~N~l~ 457 (520)
T 2z7x_B 401 LLSLNMSSNILTDTIFRCLPPRIKVLDLHSNKIKSIPKQVVKLEALQELNVASNQLK 457 (520)
T ss_dssp CCEEECCSSCCCGGGGGSCCTTCCEEECCSSCCCCCCGGGGGCTTCCEEECCSSCCC
T ss_pred CCEEECcCCCCCcchhhhhcccCCEEECCCCcccccchhhhcCCCCCEEECCCCcCC
Confidence 11 035566666666666666544 5666666666666654
No 287
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.95 E-value=3.5e-27 Score=278.99 Aligned_cols=125 Identities=19% Similarity=0.227 Sum_probs=88.0
Q ss_pred CccccccCCccccCCCCCCEEEccCCcCCccCccccCCCCCCcEEEcccCcCCccCccccccCCCCCEEEccCCccccCC
Q 003158 2 WNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQI 81 (843)
Q Consensus 2 ~N~i~~~~p~~i~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 81 (843)
+|+|++..+.+|.++++|++|+|++|+++++.|..|+++++|++|+|++|.+++..|..|+++++|++|+|++|.+++..
T Consensus 41 ~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~ 120 (606)
T 3vq2_A 41 FNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVAVETKLASLE 120 (606)
T ss_dssp TSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEECTTSCCCCSS
T ss_pred CCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEEccCCcccccc
Confidence 56677666667777777777777777777666777777777777777777777666777777777777777777776555
Q ss_pred CcccCCCCCCceeeccCCCCCC-CCCcccCCCCCCcEEEcCCCCCC
Q 003158 82 PPELSRLPSLVHMLLDNNNLTG-YLPPELSELPKLLILQLDNNNFE 126 (843)
Q Consensus 82 ~~~l~~l~~L~~L~L~~N~l~~-~~~~~~~~l~~L~~L~Ls~N~l~ 126 (843)
+..++++++|++|+|++|++++ .+|..|.++++|++|+|++|+++
T Consensus 121 ~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~ 166 (606)
T 3vq2_A 121 SFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQ 166 (606)
T ss_dssp SSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCC
T ss_pred ccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCcce
Confidence 5667777777777777777764 34666777777777766666654
No 288
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.95 E-value=7.3e-27 Score=264.82 Aligned_cols=241 Identities=19% Similarity=0.232 Sum_probs=212.0
Q ss_pred ccccccCCccccCCCCCCEEEccCCcCCccCccccCCCCCCcEEEcccCcCCccCccccccCCCCCEEEccCCccccCCC
Q 003158 3 NKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIP 82 (843)
Q Consensus 3 N~i~~~~p~~i~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~ 82 (843)
++++ .+|..+. ++++.|+|++|+|++..+..|.++++|++|+|++|.|++..+..|.++++|++|+|++|+|+...+
T Consensus 53 ~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~ 129 (440)
T 3zyj_A 53 KNLR-EVPDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPN 129 (440)
T ss_dssp CCCS-SCCSCCC--TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCCSSCCT
T ss_pred CCcC-cCCCCCC--CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCcCCeeCH
Confidence 4455 6777665 689999999999999999999999999999999999998888999999999999999999997777
Q ss_pred cccCCCCCCceeeccCCCCCCCCCcccCCCCCCcEEEcCCCCCCCCCCCccccCCCCCcEEEcCCCCCCCCCCCCCCCCC
Q 003158 83 PELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMPDLSRIPN 162 (843)
Q Consensus 83 ~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~ 162 (843)
..|..+++|++|+|++|+|+...+..|..+++|++|+|++|+..+...+..|.++++|+.|+|++|+++.++ .+..+++
T Consensus 130 ~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~-~~~~l~~ 208 (440)
T 3zyj_A 130 GAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLREIP-NLTPLIK 208 (440)
T ss_dssp TTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCSSCC-CCTTCSS
T ss_pred hHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCcccc-ccCCCcc
Confidence 789999999999999999998888899999999999999955443234457999999999999999999765 5889999
Q ss_pred CCEEEcccCcCCCCCCCCCCC-cCcCEEEccCCcCCCCCCcccCCCCCCcEEeCcCccCCCCCCchhhccccCCCCccee
Q 003158 163 LGYLDLSSNQLNGSIPPGRLS-LNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFI 241 (843)
Q Consensus 163 L~~L~Ls~N~l~~~~p~~~~~-~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~l~~~~L~~ 241 (843)
|+.|+|++|++++..|..+.. .+|+.|+|++|+|++..+..|.++++|+.|+|++|+|++..+..+..+. +|+.
T Consensus 209 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~-----~L~~ 283 (440)
T 3zyj_A 209 LDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLH-----HLER 283 (440)
T ss_dssp CCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSCT-----TCCE
T ss_pred cCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhcccc-----CCCE
Confidence 999999999999665655544 4899999999999999999999999999999999999977776666554 5669
Q ss_pred EEcCCCCCCCC
Q 003158 242 LDFQNNNLTNI 252 (843)
Q Consensus 242 L~l~~N~l~~~ 252 (843)
|+|++|.+..-
T Consensus 284 L~L~~Np~~Cd 294 (440)
T 3zyj_A 284 IHLHHNPWNCN 294 (440)
T ss_dssp EECCSSCEECS
T ss_pred EEcCCCCccCC
Confidence 99999998753
No 289
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.95 E-value=5.1e-27 Score=267.08 Aligned_cols=242 Identities=19% Similarity=0.240 Sum_probs=211.9
Q ss_pred ccccccCCccccCCCCCCEEEccCCcCCccCccccCCCCCCcEEEcccCcCCccCccccccCCCCCEEEccCCccccCCC
Q 003158 3 NKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIP 82 (843)
Q Consensus 3 N~i~~~~p~~i~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~ 82 (843)
++++ .+|..+. ++|++|+|++|+|++..+..|.++++|++|+|++|+|++..+..|.++++|++|+|++|+|+...+
T Consensus 64 ~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~ 140 (452)
T 3zyi_A 64 RGLS-EVPQGIP--SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPS 140 (452)
T ss_dssp SCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSBCCT
T ss_pred CCcC-ccCCCCC--CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcCCccCh
Confidence 3455 6776665 689999999999999999999999999999999999998888999999999999999999998777
Q ss_pred cccCCCCCCceeeccCCCCCCCCCcccCCCCCCcEEEcCCCCCCCCCCCccccCCCCCcEEEcCCCCCCCCCCCCCCCCC
Q 003158 83 PELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMPDLSRIPN 162 (843)
Q Consensus 83 ~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~ 162 (843)
..|.++++|++|+|++|+|+...+..|.++++|++|+|++|...+...+..|.++++|+.|+|++|+++++ +.+..+++
T Consensus 141 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~-~~~~~l~~ 219 (452)
T 3zyi_A 141 GAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDM-PNLTPLVG 219 (452)
T ss_dssp TTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSSC-CCCTTCTT
T ss_pred hhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCccccc-cccccccc
Confidence 88999999999999999999877789999999999999995443323345799999999999999999987 46889999
Q ss_pred CCEEEcccCcCCCCCCCCCCC-cCcCEEEccCCcCCCCCCcccCCCCCCcEEeCcCccCCCCCCchhhccccCCCCccee
Q 003158 163 LGYLDLSSNQLNGSIPPGRLS-LNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFI 241 (843)
Q Consensus 163 L~~L~Ls~N~l~~~~p~~~~~-~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~l~~~~L~~ 241 (843)
|+.|+|++|.+++..|..+.. .+|+.|+|++|++++..+..|.++++|+.|+|++|+|++..+..+..+. +|+.
T Consensus 220 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~-----~L~~ 294 (452)
T 3zyi_A 220 LEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLR-----YLVE 294 (452)
T ss_dssp CCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTCT-----TCCE
T ss_pred ccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhcccc-----CCCE
Confidence 999999999999666655443 4899999999999999999999999999999999999976666665544 5669
Q ss_pred EEcCCCCCCCCC
Q 003158 242 LDFQNNNLTNIS 253 (843)
Q Consensus 242 L~l~~N~l~~~~ 253 (843)
|+|++|.+..-.
T Consensus 295 L~L~~Np~~CdC 306 (452)
T 3zyi_A 295 LHLHHNPWNCDC 306 (452)
T ss_dssp EECCSSCEECST
T ss_pred EEccCCCcCCCC
Confidence 999999987643
No 290
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.95 E-value=5.2e-27 Score=281.38 Aligned_cols=268 Identities=22% Similarity=0.240 Sum_probs=165.5
Q ss_pred CccccccCCccccCCCCCCEEEccCCcCCccCccccCCCCCCcEEEcccCcCCccCccccccCCCCCEEEccCCccccCC
Q 003158 2 WNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQI 81 (843)
Q Consensus 2 ~N~i~~~~p~~i~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 81 (843)
+|+|++..+..|.++++|++|+|++|.+++..|..|+++++|++|+|++|.+++..+..|.++++|++|+|++|.+++..
T Consensus 34 ~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~ 113 (680)
T 1ziw_A 34 HNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQKIK 113 (680)
T ss_dssp SSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCC
T ss_pred CCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEECCCCccCccC
Confidence 45566555555666666666666666666666666666666666666666666444445666666666666666666555
Q ss_pred CcccCCCCCCceeeccCCCCCCCCCcccCCCCCCcEEEcCCCCCCCCCCCccc--cCCCCCcEEEcCCCCCCCCCCC-CC
Q 003158 82 PPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASY--SNMSKLLKLSLRNCSLQGPMPD-LS 158 (843)
Q Consensus 82 ~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~--~~l~~L~~L~L~~N~l~~~~~~-~~ 158 (843)
+..|.++++|++|+|++|++++..+..+.++++|++|+|++|.+++ ..+..+ ..+++|+.|++++|.+++.++. +.
T Consensus 114 ~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~ 192 (680)
T 1ziw_A 114 NNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQA-LKSEELDIFANSSLKKLELSSNQIKEFSPGCFH 192 (680)
T ss_dssp SCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCC-BCHHHHGGGTTCEESEEECTTCCCCCBCTTGGG
T ss_pred hhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccc-cCHHHhhccccccccEEECCCCcccccChhhhh
Confidence 5566666666666666666666556666666666666666666654 223332 2345666666666666655442 22
Q ss_pred CC---------------------------CCCCEEEcccCcCCCCCCCCCCC---cCcCEEEccCCcCCCCCCcccCCCC
Q 003158 159 RI---------------------------PNLGYLDLSSNQLNGSIPPGRLS---LNITTIKLSNNKLTGTIPSNFSGLP 208 (843)
Q Consensus 159 ~l---------------------------~~L~~L~Ls~N~l~~~~p~~~~~---~~L~~L~Ls~N~l~~~~p~~~~~l~ 208 (843)
.+ ++|+.|++++|.+++..|..+.. .+|+.|+|++|.+++..|..|..++
T Consensus 193 ~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~~~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~ 272 (680)
T 1ziw_A 193 AIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVGNDSFAWLP 272 (680)
T ss_dssp GSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEECTTTTGGGGGSCCCEEECTTSCCCEECTTTTTTCT
T ss_pred hhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCcccccChhHhhccCcCCCCEEECCCCCcCccCcccccCcc
Confidence 21 45566666666666544444332 2488888888888888888888888
Q ss_pred CCcEEeCcCccCCCCCCchhhccccCC----------------------------CCcceeEEcCCCCCCCCCCCC--cC
Q 003158 209 RLQRLFIANNSLSGSIPSSIWQSRTLN----------------------------ATETFILDFQNNNLTNISGSF--NI 258 (843)
Q Consensus 209 ~L~~L~L~~N~l~~~~p~~~~~l~~l~----------------------------~~~L~~L~l~~N~l~~~~~~~--~~ 258 (843)
+|++|+|++|++++..|..+..+.+|+ .++|+.|++++|++++++... .+
T Consensus 273 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l 352 (680)
T 1ziw_A 273 QLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGL 352 (680)
T ss_dssp TCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC------CCEECTTTTTTCTTCCEEECCSCCBCCCCTTTTTTC
T ss_pred cccEeeCCCCccCccChhhhcCCCCccEEeccchhhhcccccccccccChhhcccCCCCCEEECCCCccCCCChhHhccc
Confidence 888888888888877777665544332 234555666666666554432 45
Q ss_pred CCCcEEEeccCc
Q 003158 259 PPNVTVRLRGNP 270 (843)
Q Consensus 259 ~~l~~l~l~~Np 270 (843)
+.++.|++++|.
T Consensus 353 ~~L~~L~Ls~n~ 364 (680)
T 1ziw_A 353 INLKYLSLSNSF 364 (680)
T ss_dssp TTCCEEECTTCB
T ss_pred cCCcEEECCCCc
Confidence 566666666554
No 291
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.95 E-value=5e-27 Score=287.64 Aligned_cols=266 Identities=20% Similarity=0.237 Sum_probs=188.6
Q ss_pred CccccccCCccccCCCCCCEEEccCCcCCccC-ccccCCCCCCcEEEcccCcCCccCccccccCCCCCEEEccCCccccC
Q 003158 2 WNKISGSIPKEIGNIKSLELLLLNGNELTGSL-PEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQ 80 (843)
Q Consensus 2 ~N~i~~~~p~~i~~l~~L~~L~L~~n~l~~~~-p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 80 (843)
+|+|++..|.+|.++++|++|+|++|.+.+.+ |..|+++++|++|+|++|.+++..|..|.++++|++|+|++|.+++.
T Consensus 33 ~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~ 112 (844)
T 3j0a_A 33 FNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFELRLYFCGLSDA 112 (844)
T ss_dssp SCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSSCSCSSCCCEECTTCCCSSC
T ss_pred CCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHccCCcccCEeeCcCCCCCcc
Confidence 68888888888888888888888888555444 77888888888888888888877788888888888888888888875
Q ss_pred CCcc--cCCCCCCceeeccCCCCCCCCC-cccCCCCCCcEEEcCCCCCCCCCCCccccCC--CCCcEEEcCCCCCCCCCC
Q 003158 81 IPPE--LSRLPSLVHMLLDNNNLTGYLP-PELSELPKLLILQLDNNNFEGTTIPASYSNM--SKLLKLSLRNCSLQGPMP 155 (843)
Q Consensus 81 ~~~~--l~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l--~~L~~L~L~~N~l~~~~~ 155 (843)
++.. |.++++|++|+|++|++++..+ ..|+++++|++|+|++|.+++ ..+..+..+ ++|+.|+|++|.+.+..+
T Consensus 113 ~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~-~~~~~l~~l~~~~L~~L~L~~n~l~~~~~ 191 (844)
T 3j0a_A 113 VLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFL-VCEHELEPLQGKTLSFFSLAANSLYSRVS 191 (844)
T ss_dssp CSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCC-CCSGGGHHHHHCSSCCCEECCSBSCCCCC
T ss_pred cccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCe-eCHHHcccccCCccceEECCCCccccccc
Confidence 5554 7888888888888888886654 568888888888888888865 345554443 344444444444433222
Q ss_pred -CCCCC--------------------------------------------------------------------CCCCEE
Q 003158 156 -DLSRI--------------------------------------------------------------------PNLGYL 166 (843)
Q Consensus 156 -~~~~l--------------------------------------------------------------------~~L~~L 166 (843)
.+..+ ++|+.|
T Consensus 192 ~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~~~~~~~l~~~~~~~f~~l~~~~L~~L 271 (844)
T 3j0a_A 192 VDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFHNIKDPDQNTFAGLARSSVRHL 271 (844)
T ss_dssp CCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBCSSSCSSSTTGGGTTTTTTTTSCCCEE
T ss_pred cchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceecccccccccccccccCCCChhhhhccccCCccEE
Confidence 12211 456666
Q ss_pred EcccCcCCCCCCCCCCC-cCcCEEEccCCcCCCCCCcccCCCCCCcEEeCcCccCCCCCCchhhccccCCCCcceeEEcC
Q 003158 167 DLSSNQLNGSIPPGRLS-LNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQ 245 (843)
Q Consensus 167 ~Ls~N~l~~~~p~~~~~-~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~l~~~~L~~L~l~ 245 (843)
+|++|.+.+..+..+.. .+|+.|+|++|.+++..|..|.++++|++|+|++|++++..|..+..+. +|+.|+|+
T Consensus 272 ~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~-----~L~~L~L~ 346 (844)
T 3j0a_A 272 DLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLP-----KVAYIDLQ 346 (844)
T ss_dssp ECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCCCSCSCSSCT-----TCCEEECC
T ss_pred ECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCccCHHHhcCCC-----CCCEEECC
Confidence 66666665443333322 3677777777777777777777777777777777777766666665543 45588888
Q ss_pred CCCCCCCCCCC--cCCCCcEEEeccCcccc
Q 003158 246 NNNLTNISGSF--NIPPNVTVRLRGNPFCL 273 (843)
Q Consensus 246 ~N~l~~~~~~~--~~~~l~~l~l~~Np~~c 273 (843)
+|+|+.++... .+++|+.|++++|.+..
T Consensus 347 ~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~ 376 (844)
T 3j0a_A 347 KNHIAIIQDQTFKFLEKLQTLDLRDNALTT 376 (844)
T ss_dssp SCCCCCCCSSCSCSCCCCCEEEEETCCSCC
T ss_pred CCCCCccChhhhcCCCCCCEEECCCCCCCc
Confidence 88888887653 68889999999988753
No 292
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.95 E-value=6.1e-27 Score=261.14 Aligned_cols=246 Identities=21% Similarity=0.259 Sum_probs=196.1
Q ss_pred CCCCCCEEEccCCcCCccCccccCCCCCCcEEEcccCcCCccCccccccCCCCCEEEccCCccccCCCcccCCCCCCcee
Q 003158 15 NIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHM 94 (843)
Q Consensus 15 ~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L 94 (843)
.+.+|+.|++++|.++...+..|..+++|++|+|++|.+++..+..|..+++|++|+|++|.+++..+..|.++++|++|
T Consensus 43 ~l~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 122 (390)
T 3o6n_A 43 TLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVL 122 (390)
T ss_dssp GGCCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred ccCCceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEE
Confidence 46899999999999997666678999999999999999998888899999999999999999998888889999999999
Q ss_pred eccCCCCCCCCCcccCCCCCCcEEEcCCCCCCCCCCCccccCCCCCcEEEcCCCCCCCCCCCCCCCCC------------
Q 003158 95 LLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMPDLSRIPN------------ 162 (843)
Q Consensus 95 ~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~------------ 162 (843)
+|++|+++...+..|.++++|++|+|++|++.+ ..+..+.++++|+.|+|++|++++.+. ..+++
T Consensus 123 ~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~~l~~L~~L~l~~n~l~~~~~--~~l~~L~~L~l~~n~l~ 199 (390)
T 3o6n_A 123 VLERNDLSSLPRGIFHNTPKLTTLSMSNNNLER-IEDDTFQATTSLQNLQLSSNRLTHVDL--SLIPSLFHANVSYNLLS 199 (390)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCB-CCTTTTSSCTTCCEEECCSSCCSBCCG--GGCTTCSEEECCSSCCS
T ss_pred ECCCCccCcCCHHHhcCCCCCcEEECCCCccCc-cChhhccCCCCCCEEECCCCcCCcccc--ccccccceeeccccccc
Confidence 999999996666668999999999999999985 457789999999999999999987643 23333
Q ss_pred -------CCEEEcccCcCCCCCCCCCCCcCcCEEEccCCcCCCCCCcccCCCCCCcEEeCcCccCCCCCCchhhccccCC
Q 003158 163 -------LGYLDLSSNQLNGSIPPGRLSLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLN 235 (843)
Q Consensus 163 -------L~~L~Ls~N~l~~~~p~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~l~ 235 (843)
|+.|++++|.++ .+|... ..+|+.|+|++|.+++. ..+..+++|++|+|++|.+++..|..+..+.
T Consensus 200 ~~~~~~~L~~L~l~~n~l~-~~~~~~-~~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~--- 272 (390)
T 3o6n_A 200 TLAIPIAVEELDASHNSIN-VVRGPV-NVELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQ--- 272 (390)
T ss_dssp EEECCSSCSEEECCSSCCC-EEECCC-CSSCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEEESGGGTTCS---
T ss_pred ccCCCCcceEEECCCCeee-eccccc-cccccEEECCCCCCccc--HHHcCCCCccEEECCCCcCCCcChhHccccc---
Confidence 455555555554 223222 23677888888887753 5677788888888888888777777766544
Q ss_pred CCcceeEEcCCCCCCCCCCCC-cCCCCcEEEeccCccc
Q 003158 236 ATETFILDFQNNNLTNISGSF-NIPPNVTVRLRGNPFC 272 (843)
Q Consensus 236 ~~~L~~L~l~~N~l~~~~~~~-~~~~l~~l~l~~Np~~ 272 (843)
+|+.|+|++|+|++++... .++.++.|++++|++.
T Consensus 273 --~L~~L~L~~n~l~~~~~~~~~l~~L~~L~L~~n~l~ 308 (390)
T 3o6n_A 273 --RLERLYISNNRLVALNLYGQPIPTLKVLDLSHNHLL 308 (390)
T ss_dssp --SCCEEECCSSCCCEEECSSSCCTTCCEEECCSSCCC
T ss_pred --cCCEEECCCCcCcccCcccCCCCCCCEEECCCCcce
Confidence 3447777777777776655 5677777777777764
No 293
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.94 E-value=2.7e-26 Score=244.61 Aligned_cols=217 Identities=25% Similarity=0.340 Sum_probs=153.3
Q ss_pred ccCCCCCCcEEEcccCcCCccCccccccCCCCCEEEccCCccccCCCcccCCCCCCceeeccCCCCCCCCCcccCCCCCC
Q 003158 36 ELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKL 115 (843)
Q Consensus 36 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 115 (843)
.++++++|+++++++|+++ .+|..+. ++|+.|+|++|.|++..+..|.++++|+.|+|++|+|++..+ ...+++|
T Consensus 5 ~~~~l~~l~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L 79 (290)
T 1p9a_G 5 EVSKVASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQV--DGTLPVL 79 (290)
T ss_dssp EEECSTTCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEEC--CSCCTTC
T ss_pred cccccCCccEEECCCCCCC-cCCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccC--CCCCCcC
Confidence 3567788888888888888 5555443 678888888888887777778888888888888888875433 2677888
Q ss_pred cEEEcCCCCCCCCCCCccccCCCCCcEEEcCCCCCCCCCCC-CCCCCCCCEEEcccCcCCCCCCCCCC--CcCcCEEEcc
Q 003158 116 LILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMPD-LSRIPNLGYLDLSSNQLNGSIPPGRL--SLNITTIKLS 192 (843)
Q Consensus 116 ~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~~~--~~~L~~L~Ls 192 (843)
++|+|++|++. .+|..+..+++|+.|+|++|+++++++. |..+++|+.|+|++|+|+ .+|...+ ..+|+.|+|+
T Consensus 80 ~~L~Ls~N~l~--~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~L~ 156 (290)
T 1p9a_G 80 GTLDLSHNQLQ--SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELK-TLPPGLLTPTPKLEKLSLA 156 (290)
T ss_dssp CEEECCSSCCS--SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCC-CCCTTTTTTCTTCCEEECT
T ss_pred CEEECCCCcCC--cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCC-ccChhhcccccCCCEEECC
Confidence 88888888886 4677777788888888888888877763 777777777777777777 3333322 1256666666
Q ss_pred CCcCCCCCCcccCCCCCCcEEeCcCccCCCCCCchhhccccCCCCcceeEEcCCCCCCCCCCCCcCCCCcEEEeccCccc
Q 003158 193 NNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGSFNIPPNVTVRLRGNPFC 272 (843)
Q Consensus 193 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~l~~~~L~~L~l~~N~l~~~~~~~~~~~l~~l~l~~Np~~ 272 (843)
+|+|+...+..|..+++|+.|+|++|+|+ .+|..+. ..+.+..+++.+|||.
T Consensus 157 ~N~l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~---------------------------~~~~L~~l~L~~Np~~ 208 (290)
T 1p9a_G 157 NNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFF---------------------------GSHLLPFAFLHGNPWL 208 (290)
T ss_dssp TSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTT---------------------------TTCCCSEEECCSCCBC
T ss_pred CCcCCccCHHHhcCcCCCCEEECCCCcCC-ccChhhc---------------------------ccccCCeEEeCCCCcc
Confidence 66666544445555555555555555555 3343332 4556788999999999
Q ss_pred ccCCcccccCCCCCCC
Q 003158 273 LNTNAEQFCGSHSDDD 288 (843)
Q Consensus 273 c~~~~~~~~~~~~~~~ 288 (843)
|+|.+.++..|+....
T Consensus 209 C~c~~~~l~~wl~~~~ 224 (290)
T 1p9a_G 209 CNCEILYFRRWLQDNA 224 (290)
T ss_dssp CSGGGHHHHHHHHHTG
T ss_pred CcCccHHHHHHHHhCc
Confidence 9999999988876543
No 294
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.94 E-value=2.3e-27 Score=277.07 Aligned_cols=173 Identities=15% Similarity=0.210 Sum_probs=92.2
Q ss_pred CccccccCCccccCCCCCCEEEccCCcCCccCccccCCCCCCcEEEcccCcCCccCccccccCCCCCEEEccCCccccC-
Q 003158 2 WNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQ- 80 (843)
Q Consensus 2 ~N~i~~~~p~~i~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~- 80 (843)
+|+|++..|.+|.++++|++|+|++|++++..|+.|+++++|++|+|++|++++..+..|+++++|++|+|++|.+++.
T Consensus 35 ~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~ 114 (549)
T 2z81_A 35 FNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLG 114 (549)
T ss_dssp SSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSC
T ss_pred CCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCHHHhccCCCCcEEECCCCcccccc
Confidence 4556655566666666666666666666655556666666666666666666655555566666666666666666542
Q ss_pred CCcccCCCCCCceeeccCCCCCCCC-CcccCCCCCCcEEEcCCCCCCCCCCCccccCCCCCcEEEcCCCCCCCCCCC-CC
Q 003158 81 IPPELSRLPSLVHMLLDNNNLTGYL-PPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMPD-LS 158 (843)
Q Consensus 81 ~~~~l~~l~~L~~L~L~~N~l~~~~-~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~ 158 (843)
.|..+.++++|++|+|++|++.+.+ +..|.++++|++|+|++|++++ ..|..+..+++|+.|++++|.+..++.. +.
T Consensus 115 ~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~ 193 (549)
T 2z81_A 115 VTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRN-YQSQSLKSIRDIHHLTLHLSESAFLLEIFAD 193 (549)
T ss_dssp SSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCE-ECTTTTTTCSEEEEEEEECSBSTTHHHHHHH
T ss_pred hhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCcccc-cChhhhhccccCceEecccCcccccchhhHh
Confidence 3445566666666666666532222 3456666666666666666654 3444444433333333333322211111 12
Q ss_pred CCCCCCEEEcccCcCCC
Q 003158 159 RIPNLGYLDLSSNQLNG 175 (843)
Q Consensus 159 ~l~~L~~L~Ls~N~l~~ 175 (843)
.+++|+.|++++|++++
T Consensus 194 ~l~~L~~L~L~~n~l~~ 210 (549)
T 2z81_A 194 ILSSVRYLELRDTNLAR 210 (549)
T ss_dssp STTTBSEEEEESCBCTT
T ss_pred hcccccEEEccCCcccc
Confidence 24455555555555543
No 295
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.94 E-value=1.3e-26 Score=272.99 Aligned_cols=246 Identities=21% Similarity=0.259 Sum_probs=200.4
Q ss_pred CCCCCCEEEccCCcCCccCccccCCCCCCcEEEcccCcCCccCccccccCCCCCEEEccCCccccCCCcccCCCCCCcee
Q 003158 15 NIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHM 94 (843)
Q Consensus 15 ~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L 94 (843)
.+.+++.|++++|.++...+..|.++++|++|+|++|.|++..+..|..+++|+.|+|++|.|++..|..|+++++|++|
T Consensus 49 ~l~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 128 (597)
T 3oja_B 49 TLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVL 128 (597)
T ss_dssp GGCCCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred cCCCceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEE
Confidence 45889999999999997777788999999999999999998888899999999999999999998888889999999999
Q ss_pred eccCCCCCCCCCcccCCCCCCcEEEcCCCCCCCCCCCccccCCCCCcEEEcCCCCCCCCCCCCCCCCCC-----------
Q 003158 95 LLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMPDLSRIPNL----------- 163 (843)
Q Consensus 95 ~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L----------- 163 (843)
+|++|+|++..+..|.++++|++|+|++|.+.+ ..|..|.++++|+.|+|++|.+++++. ..+++|
T Consensus 129 ~L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~-~~~~~~~~l~~L~~L~L~~N~l~~~~~--~~l~~L~~L~l~~n~l~ 205 (597)
T 3oja_B 129 VLERNDLSSLPRGIFHNTPKLTTLSMSNNNLER-IEDDTFQATTSLQNLQLSSNRLTHVDL--SLIPSLFHANVSYNLLS 205 (597)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCB-CCTTTTTTCTTCCEEECTTSCCSBCCG--GGCTTCSEEECCSSCCS
T ss_pred EeeCCCCCCCCHHHhccCCCCCEEEeeCCcCCC-CChhhhhcCCcCcEEECcCCCCCCcCh--hhhhhhhhhhcccCccc
Confidence 999999997777778999999999999999986 567789999999999999999998653 333444
Q ss_pred --------CEEEcccCcCCCCCCCCCCCcCcCEEEccCCcCCCCCCcccCCCCCCcEEeCcCccCCCCCCchhhccccCC
Q 003158 164 --------GYLDLSSNQLNGSIPPGRLSLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLN 235 (843)
Q Consensus 164 --------~~L~Ls~N~l~~~~p~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~l~ 235 (843)
+.|++++|.++ .++... ..+|+.|+|++|.+++ +..+..+++|+.|+|++|.|++..|..+..+.
T Consensus 206 ~l~~~~~L~~L~ls~n~l~-~~~~~~-~~~L~~L~L~~n~l~~--~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~--- 278 (597)
T 3oja_B 206 TLAIPIAVEELDASHNSIN-VVRGPV-NVELTILKLQHNNLTD--TAWLLNYPGLVEVDLSYNELEKIMYHPFVKMQ--- 278 (597)
T ss_dssp EEECCTTCSEEECCSSCCC-EEECSC-CSCCCEEECCSSCCCC--CGGGGGCTTCSEEECCSSCCCEEESGGGTTCS---
T ss_pred cccCCchhheeeccCCccc-cccccc-CCCCCEEECCCCCCCC--ChhhccCCCCCEEECCCCccCCCCHHHhcCcc---
Confidence 44444444444 222221 2368888888888875 36778888888888888888877777776554
Q ss_pred CCcceeEEcCCCCCCCCCCCC-cCCCCcEEEeccCccc
Q 003158 236 ATETFILDFQNNNLTNISGSF-NIPPNVTVRLRGNPFC 272 (843)
Q Consensus 236 ~~~L~~L~l~~N~l~~~~~~~-~~~~l~~l~l~~Np~~ 272 (843)
+|+.|+|++|+|++++... .++.|..|+|++|++.
T Consensus 279 --~L~~L~Ls~N~l~~l~~~~~~l~~L~~L~Ls~N~l~ 314 (597)
T 3oja_B 279 --RLERLYISNNRLVALNLYGQPIPTLKVLDLSHNHLL 314 (597)
T ss_dssp --SCCEEECTTSCCCEEECSSSCCTTCCEEECCSSCCC
T ss_pred --CCCEEECCCCCCCCCCcccccCCCCcEEECCCCCCC
Confidence 4457888888888877655 5778888888888765
No 296
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.94 E-value=4.8e-28 Score=261.42 Aligned_cols=246 Identities=20% Similarity=0.290 Sum_probs=208.1
Q ss_pred ccCCCCCCEEEccCCcCCccCccccCCCCCCcEEEcccCcCC-ccCccccc-------cCCCCCEEEccCCccccCCCcc
Q 003158 13 IGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYIS-GSLPKSFA-------NLNKTRHFHMNNNSISGQIPPE 84 (843)
Q Consensus 13 i~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~-~~~~~~~~-------~l~~L~~L~Ls~N~l~~~~~~~ 84 (843)
+...++|+.|++++|.+ .+|..+... |+.|+|++|.++ ..++..+. ++++|++|+|++|++++.+|..
T Consensus 39 ~~~~~~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 114 (312)
T 1wwl_A 39 YGGGRSLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPP 114 (312)
T ss_dssp EEEEEECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCC
T ss_pred EccCCCceeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHH
Confidence 45667899999999999 677776654 999999999995 45666665 7999999999999999888887
Q ss_pred c--CCCCCCceeeccCCCCCCCCCcccCCC-----CCCcEEEcCCCCCCCCCCCccccCCCCCcEEEcCCCCCCCC---C
Q 003158 85 L--SRLPSLVHMLLDNNNLTGYLPPELSEL-----PKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGP---M 154 (843)
Q Consensus 85 l--~~l~~L~~L~L~~N~l~~~~~~~~~~l-----~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~---~ 154 (843)
+ ..+++|++|+|++|++++. |..+..+ ++|++|+|++|++.+ ..+..|.++++|+.|+|++|++.+. +
T Consensus 115 ~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~-~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~ 192 (312)
T 1wwl_A 115 LLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLN-FSCEQVRVFPALSTLDLSDNPELGERGLI 192 (312)
T ss_dssp SSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCC-CCTTTCCCCSSCCEEECCSCTTCHHHHHH
T ss_pred HHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCcc-chHHHhccCCCCCEEECCCCCcCcchHHH
Confidence 6 8999999999999999977 8878777 999999999999986 4568999999999999999998763 3
Q ss_pred CC--CCCCCCCCEEEcccCcCCCC--CCCCC--CCcCcCEEEccCCcCCCCCC-cccCCCCCCcEEeCcCccCCCCCCch
Q 003158 155 PD--LSRIPNLGYLDLSSNQLNGS--IPPGR--LSLNITTIKLSNNKLTGTIP-SNFSGLPRLQRLFIANNSLSGSIPSS 227 (843)
Q Consensus 155 ~~--~~~l~~L~~L~Ls~N~l~~~--~p~~~--~~~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~~ 227 (843)
+. +..+++|+.|+|++|++++. ++... ...+|+.|+|++|.+++..| ..+..+++|++|+|++|+|+ .+|..
T Consensus 193 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~ 271 (312)
T 1wwl_A 193 SALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKG 271 (312)
T ss_dssp HHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSS
T ss_pred HHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhh
Confidence 33 48899999999999999831 12121 22489999999999998875 56778999999999999999 78876
Q ss_pred hhccccCCCCcceeEEcCCCCCCCCCCCCcCCCCcEEEeccCccc
Q 003158 228 IWQSRTLNATETFILDFQNNNLTNISGSFNIPPNVTVRLRGNPFC 272 (843)
Q Consensus 228 ~~~l~~l~~~~L~~L~l~~N~l~~~~~~~~~~~l~~l~l~~Np~~ 272 (843)
+. ++|+.|+|++|+|+++|....++.++.|++++|++.
T Consensus 272 ~~-------~~L~~L~Ls~N~l~~~p~~~~l~~L~~L~L~~N~l~ 309 (312)
T 1wwl_A 272 LP-------AKLSVLDLSYNRLDRNPSPDELPQVGNLSLKGNPFL 309 (312)
T ss_dssp CC-------SEEEEEECCSSCCCSCCCTTTSCEEEEEECTTCTTT
T ss_pred cc-------CCceEEECCCCCCCCChhHhhCCCCCEEeccCCCCC
Confidence 63 578899999999999977448999999999999986
No 297
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.94 E-value=3.7e-26 Score=248.21 Aligned_cols=214 Identities=19% Similarity=0.313 Sum_probs=199.0
Q ss_pred CccccccCCccccCCCCCCEEEccCCcCCccCccccCCCCCCcEEEcccCcCCccCccccccCCCCCEEEccCCccccCC
Q 003158 2 WNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQI 81 (843)
Q Consensus 2 ~N~i~~~~p~~i~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 81 (843)
+|+|+ .+|..+.++++|++|+|++|.++ .+|..|+++++|++|+|++|.++ .+|..+.++++|+.|+|++|++.+.+
T Consensus 90 ~n~l~-~lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~ 166 (328)
T 4fcg_A 90 SVPLP-QFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTEL 166 (328)
T ss_dssp SSCCS-SCCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCC
T ss_pred CCCch-hcChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCcccc
Confidence 57788 88999999999999999999999 89999999999999999999999 88999999999999999999988899
Q ss_pred CcccCC---------CCCCceeeccCCCCCCCCCcccCCCCCCcEEEcCCCCCCCCCCCccccCCCCCcEEEcCCCCCCC
Q 003158 82 PPELSR---------LPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQG 152 (843)
Q Consensus 82 ~~~l~~---------l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~ 152 (843)
|..+.. +++|++|+|++|+++ .+|..+..+++|++|+|++|++++ +|..+..+++|+.|+|++|.+.+
T Consensus 167 p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~--l~~~l~~l~~L~~L~Ls~n~~~~ 243 (328)
T 4fcg_A 167 PEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSA--LGPAIHHLPKLEELDLRGCTALR 243 (328)
T ss_dssp CSCSEEEC-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCC--CCGGGGGCTTCCEEECTTCTTCC
T ss_pred ChhHhhccchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCc--CchhhccCCCCCEEECcCCcchh
Confidence 887764 999999999999999 788999999999999999999984 67889999999999999999887
Q ss_pred CCC-CCCCCCCCCEEEcccCcCCCCCCCCCCC-cCcCEEEccCCcCCCCCCcccCCCCCCcEEeCcCccCC
Q 003158 153 PMP-DLSRIPNLGYLDLSSNQLNGSIPPGRLS-LNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLS 221 (843)
Q Consensus 153 ~~~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 221 (843)
..+ .+..+++|+.|+|++|++.+.+|..+.. .+|+.|+|++|.+.+.+|..+..+++|+.+++..|.+.
T Consensus 244 ~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~L~~L~~l~l~~~~~~ 314 (328)
T 4fcg_A 244 NYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVPPHLQA 314 (328)
T ss_dssp BCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGGGSCTTCEEECCGGGSC
T ss_pred hhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHhhccCceEEeCCHHHHH
Confidence 666 5999999999999999999999987554 48999999999999999999999999999999998887
No 298
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.94 E-value=9.7e-26 Score=247.20 Aligned_cols=251 Identities=20% Similarity=0.305 Sum_probs=183.4
Q ss_pred CccccccCCccccCCCCCCEEEccCCcCCccCccccCCCCCCcEEEcccCcCCccCccccccCCCCCEEEccCCccccCC
Q 003158 2 WNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQI 81 (843)
Q Consensus 2 ~N~i~~~~p~~i~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 81 (843)
+|+|++ ++. +.++++|++|+|++|.++. + +.|.++++|++|+|++|.+++. +. +..+++|+.|++++|.....+
T Consensus 75 ~n~i~~-~~~-~~~l~~L~~L~L~~n~i~~-~-~~~~~l~~L~~L~l~~n~i~~~-~~-~~~l~~L~~L~l~~n~~~~~~ 148 (347)
T 4fmz_A 75 GNQITD-ISP-LSNLVKLTNLYIGTNKITD-I-SALQNLTNLRELYLNEDNISDI-SP-LANLTKMYSLNLGANHNLSDL 148 (347)
T ss_dssp SSCCCC-CGG-GTTCTTCCEEECCSSCCCC-C-GGGTTCTTCSEEECTTSCCCCC-GG-GTTCTTCCEEECTTCTTCCCC
T ss_pred CCcccc-chh-hhcCCcCCEEEccCCcccC-c-hHHcCCCcCCEEECcCCcccCc-hh-hccCCceeEEECCCCCCcccc
Confidence 577774 444 8899999999999999985 3 4699999999999999999854 33 888999999999999665343
Q ss_pred CcccCCCCCCceeeccCCCCCCCCCcccCCCCCCcEEEcCCCCCCCCCCCccccCCCCCcEEEcCCCCCCCCCCCCCCCC
Q 003158 82 PPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMPDLSRIP 161 (843)
Q Consensus 82 ~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~ 161 (843)
..+..+++|++|++++|.+.+..+ +..+++|+.|++++|.+.+ ++. +..+++|+.|++++|.+++..+ +..++
T Consensus 149 -~~~~~l~~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n~l~~--~~~-~~~l~~L~~L~l~~n~l~~~~~-~~~~~ 221 (347)
T 4fmz_A 149 -SPLSNMTGLNYLTVTESKVKDVTP--IANLTDLYSLSLNYNQIED--ISP-LASLTSLHYFTAYVNQITDITP-VANMT 221 (347)
T ss_dssp -GGGTTCTTCCEEECCSSCCCCCGG--GGGCTTCSEEECTTSCCCC--CGG-GGGCTTCCEEECCSSCCCCCGG-GGGCT
T ss_pred -cchhhCCCCcEEEecCCCcCCchh--hccCCCCCEEEccCCcccc--ccc-ccCCCccceeecccCCCCCCch-hhcCC
Confidence 348888889999999888885433 7788888888888888864 333 7777788888888887776655 66777
Q ss_pred CCCEEEcccCcCCCCCCCCCCCcCcCEEEccCCcCCCCCCcccCCCCCCcEEeCcCccCCCCCCchhhccccCCCCccee
Q 003158 162 NLGYLDLSSNQLNGSIPPGRLSLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFI 241 (843)
Q Consensus 162 ~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~l~~~~L~~ 241 (843)
+|+.|++++|.+++ ++......+|+.|++++|.+++. ..+..+++|++|++++|++++. ..+.. .++|+.
T Consensus 222 ~L~~L~l~~n~l~~-~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~--~~~~~-----l~~L~~ 291 (347)
T 4fmz_A 222 RLNSLKIGNNKITD-LSPLANLSQLTWLEIGTNQISDI--NAVKDLTKLKMLNVGSNQISDI--SVLNN-----LSQLNS 291 (347)
T ss_dssp TCCEEECCSSCCCC-CGGGTTCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCCC--GGGGG-----CTTCSE
T ss_pred cCCEEEccCCccCC-CcchhcCCCCCEEECCCCccCCC--hhHhcCCCcCEEEccCCccCCC--hhhcC-----CCCCCE
Confidence 77888888887773 33333334777777777777753 4577777777777777777743 22333 234557
Q ss_pred EEcCCCCCCCCCCCC--cCCCCcEEEeccCcccccC
Q 003158 242 LDFQNNNLTNISGSF--NIPPNVTVRLRGNPFCLNT 275 (843)
Q Consensus 242 L~l~~N~l~~~~~~~--~~~~l~~l~l~~Np~~c~~ 275 (843)
|++++|++++.+... .++.++.|++++|++....
T Consensus 292 L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~ 327 (347)
T 4fmz_A 292 LFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIR 327 (347)
T ss_dssp EECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCCCG
T ss_pred EECcCCcCCCcChhHhhccccCCEEEccCCcccccc
Confidence 777777777665443 5777777777777766543
No 299
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.94 E-value=4.5e-26 Score=266.73 Aligned_cols=256 Identities=19% Similarity=0.232 Sum_probs=193.8
Q ss_pred CccccccCCccccCCCCCCEEEccCCcCCccCccccCCCCCCcEEEcccCcCCccCccccccCCCCCEEEccCCccccCC
Q 003158 2 WNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQI 81 (843)
Q Consensus 2 ~N~i~~~~p~~i~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 81 (843)
+|+++ .+|..+. ++|++|+|++|++++..+..|+++++|++|+|++|+|++..|..|.++++|++|+|++|+|+ .+
T Consensus 40 ~~~L~-~ip~~~~--~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~l 115 (562)
T 3a79_B 40 NRNLT-HVPKDLP--PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRLQ-NI 115 (562)
T ss_dssp TSCCC-SCCTTSC--TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTSCCC-EE
T ss_pred CCCCc-cCCCCCC--CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCCcCC-cc
Confidence 57888 4887665 89999999999999888899999999999999999999888999999999999999999999 55
Q ss_pred CcccCCCCCCceeeccCCCCCCC-CCcccCCCCCCcEEEcCCCCCCCCCCCccccCCCCC--cEEEcCCCCC--CCCCCC
Q 003158 82 PPELSRLPSLVHMLLDNNNLTGY-LPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKL--LKLSLRNCSL--QGPMPD 156 (843)
Q Consensus 82 ~~~l~~l~~L~~L~L~~N~l~~~-~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L--~~L~L~~N~l--~~~~~~ 156 (843)
|.. .+++|++|+|++|++++. .|..|.++++|++|+|++|++.+ ..+..+++| +.|+|++|.+ ++..+.
T Consensus 116 p~~--~l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~----~~~~~l~~L~L~~L~L~~n~l~~~~~~~~ 189 (562)
T 3a79_B 116 SCC--PMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQ----LDLLPVAHLHLSCILLDLVSYHIKGGETE 189 (562)
T ss_dssp CSC--CCTTCSEEECCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCT----TTTGGGTTSCEEEEEEEESSCCCCSSSCC
T ss_pred Ccc--ccccCCEEECCCCCccccCchHhhcccCcccEEecCCCcccc----CchhhhhhceeeEEEeecccccccccCcc
Confidence 655 899999999999999964 46899999999999999999974 235555555 8888888888 544332
Q ss_pred -CCCCC--------------------------------------------------------------------------
Q 003158 157 -LSRIP-------------------------------------------------------------------------- 161 (843)
Q Consensus 157 -~~~l~-------------------------------------------------------------------------- 161 (843)
+..+.
T Consensus 190 ~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~~~~~l~~l~~L~~L~L~~~~l~~~~~~~~ 269 (562)
T 3a79_B 190 SLQIPNTTVLHLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMTFLSELTRGPTLLNVTLQHIETTWKCSVKL 269 (562)
T ss_dssp EEEECCEEEEEEEECSSSCCCCCCEEEESSEEEEEEEEEECCSTTHHHHHHHHHHHHSCSSCEEEEEEEEEECHHHHHHH
T ss_pred cccccCcceEEEEecCccchhhhhhhcccccceEEEecccccccccchHHHHHHHHhccCcceEEEecCCcCcHHHHHHH
Confidence 32221
Q ss_pred -------CCCEEEcccCcCCCCCCCCC-----------------------------------------------------
Q 003158 162 -------NLGYLDLSSNQLNGSIPPGR----------------------------------------------------- 181 (843)
Q Consensus 162 -------~L~~L~Ls~N~l~~~~p~~~----------------------------------------------------- 181 (843)
+|++|++++|.++|.+|...
T Consensus 270 ~~~~~~~~L~~L~l~~n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~~~p~~~~~~~~~~~~L~~L~l~~n~~~~~~~~ 349 (562)
T 3a79_B 270 FQFFWPRPVEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQVFLFSKEALYSVFAEMNIKMLSISDTPFIHMVCP 349 (562)
T ss_dssp HHHHTTSSEEEEEEEEEEECSCCCCCCCCCCSCSCCEEEEEEEEECCCSSCHHHHHHHHHTCCCSEEEEESSCCCCCCCC
T ss_pred HHhhhcccccEEEEeccEeeccccchhhhcccccchheehhhcccceeecChhhhhhhhccCcceEEEccCCCcccccCc
Confidence 67777777777777776644
Q ss_pred -CCcCcCEEEccCCcCCCCCCcccCCCCCCcEEeCcCccCCCC--CCchhhccccCCCCcceeEEcCCCCCCC-CCCCC-
Q 003158 182 -LSLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGS--IPSSIWQSRTLNATETFILDFQNNNLTN-ISGSF- 256 (843)
Q Consensus 182 -~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~--~p~~~~~l~~l~~~~L~~L~l~~N~l~~-~~~~~- 256 (843)
...+|+.|+|++|.+++.+|..+.++++|++|+|++|++++. +|..+..+ ++|+.|++++|++++ ++...
T Consensus 350 ~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l-----~~L~~L~l~~N~l~~~~~~~~~ 424 (562)
T 3a79_B 350 PSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNM-----SSLETLDVSLNSLNSHAYDRTC 424 (562)
T ss_dssp SSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTC-----TTCCEEECTTSCCBSCCSSCCC
T ss_pred cCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCC-----CCCCEEECCCCcCCCccChhhh
Confidence 112677777777777776777777777777777777777642 22334333 345577777777776 55542
Q ss_pred -cCCCCcEEEeccCccc
Q 003158 257 -NIPPNVTVRLRGNPFC 272 (843)
Q Consensus 257 -~~~~l~~l~l~~Np~~ 272 (843)
.++.++.|++++|.+.
T Consensus 425 ~~l~~L~~L~l~~n~l~ 441 (562)
T 3a79_B 425 AWAESILVLNLSSNMLT 441 (562)
T ss_dssp CCCTTCCEEECCSSCCC
T ss_pred cCcccCCEEECCCCCCC
Confidence 5677777777777653
No 300
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.94 E-value=1.1e-25 Score=239.66 Aligned_cols=220 Identities=18% Similarity=0.229 Sum_probs=197.5
Q ss_pred CccccccCCccccCCCCCCEEEccCCcCCccCccccCCCCCCcEEEcccCcCCccCccccccCCCCCEEEccCCc-cccC
Q 003158 2 WNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNS-ISGQ 80 (843)
Q Consensus 2 ~N~i~~~~p~~i~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~-l~~~ 80 (843)
+++++ .+|..+ .++|++|+|++|++++..+..|..+++|++|+|++|.+++..+..|.++++|++|+|++|. ++..
T Consensus 20 ~~~l~-~ip~~~--~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~ 96 (285)
T 1ozn_A 20 QQGLQ-AVPVGI--PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSV 96 (285)
T ss_dssp SSCCS-SCCTTC--CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCC
T ss_pred cCCcc-cCCcCC--CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCcccc
Confidence 34555 566554 4799999999999998888899999999999999999998889999999999999999997 8877
Q ss_pred CCcccCCCCCCceeeccCCCCCCCCCcccCCCCCCcEEEcCCCCCCCCCCCccccCCCCCcEEEcCCCCCCCCCCC-CCC
Q 003158 81 IPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMPD-LSR 159 (843)
Q Consensus 81 ~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~ 159 (843)
.+..|..+++|++|+|++|++++..+..|.++++|++|+|++|++.+ ..+..|..+++|+.|+|++|+++++++. +..
T Consensus 97 ~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~-~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~ 175 (285)
T 1ozn_A 97 DPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQA-LPDDTFRDLGNLTHLFLHGNRISSVPERAFRG 175 (285)
T ss_dssp CTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCC-CCTTTTTTCTTCCEEECCSSCCCEECTTTTTT
T ss_pred CHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccc-cCHhHhccCCCccEEECCCCcccccCHHHhcC
Confidence 78899999999999999999998889999999999999999999985 4456689999999999999999998885 999
Q ss_pred CCCCCEEEcccCcCCCCCCCCCCC-cCcCEEEccCCcCCCCCCcccCCCCCCcEEeCcCccCCCCCC
Q 003158 160 IPNLGYLDLSSNQLNGSIPPGRLS-LNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIP 225 (843)
Q Consensus 160 l~~L~~L~Ls~N~l~~~~p~~~~~-~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p 225 (843)
+++|+.|+|++|.+++..|..+.. .+|+.|+|++|.+++..+..|..+++|+.|+|++|++.+..+
T Consensus 176 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~~ 242 (285)
T 1ozn_A 176 LHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCR 242 (285)
T ss_dssp CTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECSGG
T ss_pred ccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCccCCCC
Confidence 999999999999999776766554 489999999999998888889999999999999999986543
No 301
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.94 E-value=4.6e-26 Score=241.36 Aligned_cols=234 Identities=16% Similarity=0.174 Sum_probs=124.7
Q ss_pred EEccCCcCCccCccccCCCCCCcEEEcccCcCCccCccccccCCCCCEEEccCCccccCCCcccCCCCCCceeeccCCCC
Q 003158 22 LLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNL 101 (843)
Q Consensus 22 L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l 101 (843)
++..+.++. .+|..+. ++|++|+|++|++++..+..|.++++|++|+|++|.+++..+..|.++++|++|+|++|++
T Consensus 12 ~~c~~~~l~-~ip~~l~--~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l 88 (276)
T 2z62_A 12 YQCMELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPI 88 (276)
T ss_dssp EECTTSCCS-SCCSSSC--TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCC
T ss_pred EEecCCCcc-ccCCCCC--CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCcc
Confidence 444444444 3443332 3455555555555544444555555555555555555544444455555555555555555
Q ss_pred CCCCCcccCCCCCCcEEEcCCCCCCCCCCCccccCCCCCcEEEcCCCCCCCC--CCCCCCCCCCCEEEcccCcCCCCCCC
Q 003158 102 TGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGP--MPDLSRIPNLGYLDLSSNQLNGSIPP 179 (843)
Q Consensus 102 ~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~--~~~~~~l~~L~~L~Ls~N~l~~~~p~ 179 (843)
++..+..|.++++|++|++++|++.+ ..+..+..+++|+.|+|++|.+++. +..+..+++|+.|+|++|+++
T Consensus 89 ~~~~~~~~~~l~~L~~L~l~~n~l~~-~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~----- 162 (276)
T 2z62_A 89 QSLALGAFSGLSSLQKLVAVETNLAS-LENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQ----- 162 (276)
T ss_dssp CEECTTTTTTCTTCCEEECTTSCCCC-STTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCC-----
T ss_pred CccChhhhcCCccccEEECCCCCccc-cCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCC-----
Confidence 54444455555555555555555543 2222344555555555555555442 223444444444444444444
Q ss_pred CCCCcCcCEEEccCCcCCCCCCcccCCCCCCc----EEeCcCccCCCCCCchhhccccCCCCcceeEEcCCCCCCCCCCC
Q 003158 180 GRLSLNITTIKLSNNKLTGTIPSNFSGLPRLQ----RLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGS 255 (843)
Q Consensus 180 ~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~----~L~L~~N~l~~~~p~~~~~l~~l~~~~L~~L~l~~N~l~~~~~~ 255 (843)
+..+..|..+++|+ .|++++|.+++..+..+. ..+|+.|+|++|+|++++..
T Consensus 163 ------------------~~~~~~~~~l~~L~~l~l~L~ls~n~l~~~~~~~~~------~~~L~~L~L~~n~l~~~~~~ 218 (276)
T 2z62_A 163 ------------------SIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFK------EIRLKELALDTNQLKSVPDG 218 (276)
T ss_dssp ------------------EECGGGGHHHHTCTTCCEEEECCSSCCCEECTTSSC------SCCEEEEECCSSCCSCCCTT
T ss_pred ------------------cCCHHHhhhhhhccccceeeecCCCcccccCccccC------CCcccEEECCCCceeecCHh
Confidence 23333333333333 555666665543333221 12456677777777766654
Q ss_pred C--cCCCCcEEEeccCcccccCC-cccccCCCCCCC
Q 003158 256 F--NIPPNVTVRLRGNPFCLNTN-AEQFCGSHSDDD 288 (843)
Q Consensus 256 ~--~~~~l~~l~l~~Np~~c~~~-~~~~~~~~~~~~ 288 (843)
. .++.++.|++++|||.|+|. +.+++.|.....
T Consensus 219 ~~~~l~~L~~L~l~~N~~~c~c~~l~~l~~~~~~~~ 254 (276)
T 2z62_A 219 IFDRLTSLQKIWLHTNPWDCSCPRIDYLSRWLNKNS 254 (276)
T ss_dssp TTTTCCSCCEEECCSSCBCCCTTTTHHHHHHHHHTG
T ss_pred HhcccccccEEEccCCcccccCCchHHHHHHHHhcc
Confidence 3 57888999999999999996 677888876543
No 302
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.94 E-value=8.5e-26 Score=239.30 Aligned_cols=216 Identities=23% Similarity=0.277 Sum_probs=192.5
Q ss_pred cCCccccCCCCCCEEEccCCcCCccCccccCCCCCCcEEEcccCcCCccCccccccCCCCCEEEccCCccccCCCcccCC
Q 003158 8 SIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSR 87 (843)
Q Consensus 8 ~~p~~i~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~ 87 (843)
.+|..+. ++|++|+|++|++++..+..|.++++|++|+|++|++++..+..|.++++|++|+|++|.+++..+..|.+
T Consensus 21 ~ip~~l~--~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~ 98 (276)
T 2z62_A 21 KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSG 98 (276)
T ss_dssp SCCSSSC--TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTT
T ss_pred ccCCCCC--CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcC
Confidence 5777664 58999999999999888889999999999999999999888889999999999999999999888889999
Q ss_pred CCCCceeeccCCCCCCCCCcccCCCCCCcEEEcCCCCCCCCCCCccccCCCCCcEEEcCCCCCCCCCC-CCCCCCCCC--
Q 003158 88 LPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMP-DLSRIPNLG-- 164 (843)
Q Consensus 88 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~l~~L~-- 164 (843)
+++|++|++++|++++..+..+..+++|++|+|++|++.+..+|..+.++++|+.|+|++|+++++++ .+..+.+|+
T Consensus 99 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l 178 (276)
T 2z62_A 99 LSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLL 178 (276)
T ss_dssp CTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTC
T ss_pred CccccEEECCCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhcccc
Confidence 99999999999999988777899999999999999999865578999999999999999999999876 466666665
Q ss_pred --EEEcccCcCCCCCCCCCCCcCcCEEEccCCcCCCCCCcccCCCCCCcEEeCcCccCCCCCC
Q 003158 165 --YLDLSSNQLNGSIPPGRLSLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIP 225 (843)
Q Consensus 165 --~L~Ls~N~l~~~~p~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p 225 (843)
.|++++|.+++..+......+|+.|+|++|.|++..+..|..+++|+.|+|++|++.+.-|
T Consensus 179 ~l~L~ls~n~l~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 241 (276)
T 2z62_A 179 NLSLDLSLNPMNFIQPGAFKEIRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 241 (276)
T ss_dssp CEEEECCSSCCCEECTTSSCSCCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCCCTT
T ss_pred ceeeecCCCcccccCccccCCCcccEEECCCCceeecCHhHhcccccccEEEccCCcccccCC
Confidence 8999999999554444444589999999999998888888999999999999999997554
No 303
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.93 E-value=2.5e-25 Score=264.16 Aligned_cols=146 Identities=21% Similarity=0.238 Sum_probs=133.9
Q ss_pred cccccCCccccCCCCCCEEEccCCcCCccCccccCCCCCCcEEEcccCcCCccCccccccCCCCCEEEccCCccccCCCc
Q 003158 4 KISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPP 83 (843)
Q Consensus 4 ~i~~~~p~~i~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~ 83 (843)
+++ .+|..+. .++++|||++|+|+++.+..|.++++|++|+|++|+|+++.+.+|.++++|++|+|++|+|++..+.
T Consensus 42 ~l~-~vP~~lp--~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~ 118 (635)
T 4g8a_A 42 NFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALG 118 (635)
T ss_dssp CCS-SCCSSSC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGG
T ss_pred CcC-ccCCCCC--cCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHH
Confidence 455 6777664 4899999999999988889999999999999999999988888999999999999999999988788
Q ss_pred ccCCCCCCceeeccCCCCCCCCCcccCCCCCCcEEEcCCCCCCCCCCCccccCCCCCcEEEcCCCCCCC
Q 003158 84 ELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQG 152 (843)
Q Consensus 84 ~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~ 152 (843)
.|.++++|++|+|++|+|++..+..|+++++|++|+|++|.+++...|..+..+++|++|+|++|++++
T Consensus 119 ~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~ 187 (635)
T 4g8a_A 119 AFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQS 187 (635)
T ss_dssp GGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCE
T ss_pred HhcCCCCCCEEECCCCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCccccc
Confidence 899999999999999999988888899999999999999999876778999999999999999998754
No 304
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.93 E-value=3.3e-27 Score=270.40 Aligned_cols=197 Identities=22% Similarity=0.233 Sum_probs=131.2
Q ss_pred CCCEEEccCCcCCccCccccCCCCCCcEEEcccCcCCccCccccccCCCCCEEEccCCccccCCCcccCCCCCCceeecc
Q 003158 18 SLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLD 97 (843)
Q Consensus 18 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~ 97 (843)
+|+.|+|++|.+++..|..|+.+++|++|+|++|.+++..| |..+++|+.|+|++|.|++.. ..++|+.|+|+
T Consensus 35 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~-----~~~~L~~L~L~ 107 (487)
T 3oja_A 35 NVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELL-----VGPSIETLHAA 107 (487)
T ss_dssp GCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEE-----ECTTCCEEECC
T ss_pred CccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCC-----CCCCcCEEECc
Confidence 67778888777777777777777777777777777775554 777777777777777777432 22677777777
Q ss_pred CCCCCCCCCcccCCCCCCcEEEcCCCCCCCCCCCccccCCCCCcEEEcCCCCCCCCCC-CCC-CCCCCCEEEcccCcCCC
Q 003158 98 NNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMP-DLS-RIPNLGYLDLSSNQLNG 175 (843)
Q Consensus 98 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~-~l~~L~~L~Ls~N~l~~ 175 (843)
+|+|++..+. .+++|+.|+|++|.+++ ..|..+.++++|+.|+|++|.+++.++ .+. .+++|+.|+|++|.|++
T Consensus 108 ~N~l~~~~~~---~l~~L~~L~L~~N~l~~-~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~ 183 (487)
T 3oja_A 108 NNNISRVSCS---RGQGKKNIYLANNKITM-LRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYD 183 (487)
T ss_dssp SSCCCCEEEC---CCSSCEEEECCSSCCCS-GGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCE
T ss_pred CCcCCCCCcc---ccCCCCEEECCCCCCCC-CCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCcccc
Confidence 7777755443 34677777777777765 446667777777777777777777555 343 56777777777777763
Q ss_pred CCCCCCCCcCcCEEEccCCcCCCCCCcccCCCCCCcEEeCcCccCCCCCCchh
Q 003158 176 SIPPGRLSLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSI 228 (843)
Q Consensus 176 ~~p~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~ 228 (843)
. +......+|+.|+|++|.|++..| .|..+++|+.|+|++|.|++ +|..+
T Consensus 184 ~-~~~~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~-lp~~l 233 (487)
T 3oja_A 184 V-KGQVVFAKLKTLDLSSNKLAFMGP-EFQSAAGVTWISLRNNKLVL-IEKAL 233 (487)
T ss_dssp E-ECCCCCTTCCEEECCSSCCCEECG-GGGGGTTCSEEECTTSCCCE-ECTTC
T ss_pred c-cccccCCCCCEEECCCCCCCCCCH-hHcCCCCccEEEecCCcCcc-cchhh
Confidence 3 333334466666666666664333 35666666666666666653 44443
No 305
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.93 E-value=2.2e-26 Score=252.97 Aligned_cols=245 Identities=18% Similarity=0.183 Sum_probs=210.9
Q ss_pred CccccccCCccccCCCCCCEEEccCCcCCccCccccCCCCCCcEEEcccCcCCccCccccccCCCCCEEEccCCccccCC
Q 003158 2 WNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQI 81 (843)
Q Consensus 2 ~N~i~~~~p~~i~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 81 (843)
+|+|++..+..|.++++|++|+|++|++++..+..|+++++|++|+|++|++++..+..|.++++|++|+|++|+++...
T Consensus 61 ~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~ 140 (353)
T 2z80_A 61 NNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLG 140 (353)
T ss_dssp TSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSC
T ss_pred CCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCcccC
Confidence 68899877779999999999999999999888999999999999999999999766666999999999999999999554
Q ss_pred C-cccCCCCCCceeeccCC-CCCCCCCcccCCCCCCcEEEcCCCCCCCCCCCccccCCCCCcEEEcCCCCCCCCCCC-CC
Q 003158 82 P-PELSRLPSLVHMLLDNN-NLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMPD-LS 158 (843)
Q Consensus 82 ~-~~l~~l~~L~~L~L~~N-~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~ 158 (843)
+ ..+.++++|++|++++| .++...+..|.++++|++|+|++|++.+ ..|..+.++++|++|++++|+++.++.. +.
T Consensus 141 ~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~-~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~ 219 (353)
T 2z80_A 141 ETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQS-YEPKSLKSIQNVSHLILHMKQHILLLEIFVD 219 (353)
T ss_dssp SSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCE-ECTTTTTTCSEEEEEEEECSCSTTHHHHHHH
T ss_pred chhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECCCCCcCc-cCHHHHhccccCCeecCCCCccccchhhhhh
Confidence 4 47999999999999999 5777777899999999999999999986 5688999999999999999999876664 55
Q ss_pred CCCCCCEEEcccCcCCCCCCCCCC----CcCcCEEEccCCcCCC----CCCcccCCCCCCcEEeCcCccCCCCCCchh-h
Q 003158 159 RIPNLGYLDLSSNQLNGSIPPGRL----SLNITTIKLSNNKLTG----TIPSNFSGLPRLQRLFIANNSLSGSIPSSI-W 229 (843)
Q Consensus 159 ~l~~L~~L~Ls~N~l~~~~p~~~~----~~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~-~ 229 (843)
.+++|+.|++++|.+++..+.... ...++.++|++|.+++ .+|..+..+++|++|+|++|+|+ .+|..+ .
T Consensus 220 ~~~~L~~L~L~~n~l~~~~~~~l~~~~~~~~l~~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~-~i~~~~~~ 298 (353)
T 2z80_A 220 VTSSVECLELRDTDLDTFHFSELSTGETNSLIKKFTFRNVKITDESLFQVMKLLNQISGLLELEFSRNQLK-SVPDGIFD 298 (353)
T ss_dssp HTTTEEEEEEESCBCTTCCCC------CCCCCCEEEEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCC-CCCTTTTT
T ss_pred hcccccEEECCCCccccccccccccccccchhhccccccccccCcchhhhHHHHhcccCCCEEECCCCCCC-ccCHHHHh
Confidence 689999999999999965443322 2368899999999886 46778999999999999999999 666654 4
Q ss_pred ccccCCCCcceeEEcCCCCCCCCC
Q 003158 230 QSRTLNATETFILDFQNNNLTNIS 253 (843)
Q Consensus 230 ~l~~l~~~~L~~L~l~~N~l~~~~ 253 (843)
.+ ++|+.|+|++|.++.-.
T Consensus 299 ~l-----~~L~~L~L~~N~~~~~~ 317 (353)
T 2z80_A 299 RL-----TSLQKIWLHTNPWDCSC 317 (353)
T ss_dssp TC-----TTCCEEECCSSCBCCCH
T ss_pred cC-----CCCCEEEeeCCCccCcC
Confidence 44 45669999999998754
No 306
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.93 E-value=4.2e-26 Score=246.18 Aligned_cols=236 Identities=19% Similarity=0.258 Sum_probs=190.1
Q ss_pred CccccccCCccccCCCCCCEEEccCCcCC-ccCccccC-------CCCCCcEEEcccCcCCccCcccc--ccCCCCCEEE
Q 003158 2 WNKISGSIPKEIGNIKSLELLLLNGNELT-GSLPEELG-------YLPKLDRIQIDQNYISGSLPKSF--ANLNKTRHFH 71 (843)
Q Consensus 2 ~N~i~~~~p~~i~~l~~L~~L~L~~n~l~-~~~p~~~~-------~l~~L~~L~L~~N~l~~~~~~~~--~~l~~L~~L~ 71 (843)
+|++ .+|..+... |+.|+|++|+++ ..+|..+. ++++|++|+|++|++++.+|..+ ..+++|++|+
T Consensus 52 ~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~ 127 (312)
T 1wwl_A 52 VDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPPLLEATGPDLNILN 127 (312)
T ss_dssp CCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEE
T ss_pred cccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHHHHHhcCCCccEEE
Confidence 4666 678777654 899999999994 56777666 78999999999999998888876 8899999999
Q ss_pred ccCCccccCCCcccCCC-----CCCceeeccCCCCCCCCCcccCCCCCCcEEEcCCCCCCCC-CCCccc--cCCCCCcEE
Q 003158 72 MNNNSISGQIPPELSRL-----PSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGT-TIPASY--SNMSKLLKL 143 (843)
Q Consensus 72 Ls~N~l~~~~~~~l~~l-----~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~--~~l~~L~~L 143 (843)
|++|++++. |..+..+ ++|++|+|++|++++..+..|..+++|++|+|++|++.+. ..+..+ ..+++|+.|
T Consensus 128 Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L 206 (312)
T 1wwl_A 128 LRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISALCPLKFPTLQVL 206 (312)
T ss_dssp EESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHHSCTTSCTTCCEE
T ss_pred ccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHHHHhccCCCCCEE
Confidence 999999976 7777766 8999999999999988888999999999999999997641 123334 888999999
Q ss_pred EcCCCCCCCCCC---C-CCCCCCCCEEEcccCcCCCCCCCCCC--CcCcCEEEccCCcCCCCCCcccCCCCCCcEEeCcC
Q 003158 144 SLRNCSLQGPMP---D-LSRIPNLGYLDLSSNQLNGSIPPGRL--SLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIAN 217 (843)
Q Consensus 144 ~L~~N~l~~~~~---~-~~~l~~L~~L~Ls~N~l~~~~p~~~~--~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 217 (843)
+|++|++++++. . +..+++|+.|+|++|++++.+|...+ ..+|+.|+|++|.|+ .+|..+. ++|++|+|++
T Consensus 207 ~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~~--~~L~~L~Ls~ 283 (312)
T 1wwl_A 207 ALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGLP--AKLSVLDLSY 283 (312)
T ss_dssp ECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSSCC--SEEEEEECCS
T ss_pred ECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhhcc--CCceEEECCC
Confidence 999999985432 2 45778999999999999976653322 358999999999998 6777766 8899999999
Q ss_pred ccCCCCCCchhhccccCCCCcceeEEcCCCCCCCC
Q 003158 218 NSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNI 252 (843)
Q Consensus 218 N~l~~~~p~~~~~l~~l~~~~L~~L~l~~N~l~~~ 252 (843)
|+|++. |. +.. .++|+.|+|++|+|++.
T Consensus 284 N~l~~~-p~-~~~-----l~~L~~L~L~~N~l~~~ 311 (312)
T 1wwl_A 284 NRLDRN-PS-PDE-----LPQVGNLSLKGNPFLDS 311 (312)
T ss_dssp SCCCSC-CC-TTT-----SCEEEEEECTTCTTTCC
T ss_pred CCCCCC-hh-Hhh-----CCCCCEEeccCCCCCCC
Confidence 999865 65 543 45677999999998864
No 307
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.93 E-value=1.5e-25 Score=241.13 Aligned_cols=242 Identities=19% Similarity=0.229 Sum_probs=210.5
Q ss_pred ccccccCCccccCCCCCCEEEccCCcCCccCccccCCCCCCcEEEcccCcCCcc--CccccccCCCCCEEEccCCccccC
Q 003158 3 NKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGS--LPKSFANLNKTRHFHMNNNSISGQ 80 (843)
Q Consensus 3 N~i~~~~p~~i~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~--~~~~~~~l~~L~~L~Ls~N~l~~~ 80 (843)
++++ .+|..+. ++|++|+|++|+++...+..|+++++|++|+|++|.++.. .+..+..+++|++|+|++|.++ .
T Consensus 17 ~~l~-~ip~~~~--~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~-~ 92 (306)
T 2z66_A 17 KGLT-SVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLSFNGVI-T 92 (306)
T ss_dssp SCCS-SCCSCCC--TTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEECCSCSEE-E
T ss_pred CCcc-cCCCCCC--CCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEECCCCccc-c
Confidence 4555 6776554 6899999999999966666789999999999999999833 3677888999999999999998 5
Q ss_pred CCcccCCCCCCceeeccCCCCCCCCC-cccCCCCCCcEEEcCCCCCCCCCCCccccCCCCCcEEEcCCCCCCC--CCCCC
Q 003158 81 IPPELSRLPSLVHMLLDNNNLTGYLP-PELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQG--PMPDL 157 (843)
Q Consensus 81 ~~~~l~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~--~~~~~ 157 (843)
++..+..+++|++|+|++|++++..+ ..+..+++|++|+|++|.+.+ ..+..+.++++|+.|+|++|.+++ .+..+
T Consensus 93 l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~-~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~ 171 (306)
T 2z66_A 93 MSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRV-AFNGIFNGLSSLEVLKMAGNSFQENFLPDIF 171 (306)
T ss_dssp EEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEE-CSTTTTTTCTTCCEEECTTCEEGGGEECSCC
T ss_pred ChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCc-cchhhcccCcCCCEEECCCCccccccchhHH
Confidence 67779999999999999999997655 689999999999999999986 567889999999999999999987 45569
Q ss_pred CCCCCCCEEEcccCcCCCCCCCCCCC-cCcCEEEccCCcCCCCCCcccCCCCCCcEEeCcCccCCCCCCchhhccccCCC
Q 003158 158 SRIPNLGYLDLSSNQLNGSIPPGRLS-LNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNA 236 (843)
Q Consensus 158 ~~l~~L~~L~Ls~N~l~~~~p~~~~~-~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~l~~ 236 (843)
..+++|+.|+|++|.+++..|..+.. .+|+.|+|++|.+++..+..|..+++|+.|+|++|++++..|..+..+.
T Consensus 172 ~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~---- 247 (306)
T 2z66_A 172 TELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFP---- 247 (306)
T ss_dssp TTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCCCBCSSSSCCCCC----
T ss_pred hhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeECCCCCCcccCHHHHHhhh----
Confidence 99999999999999999666665543 4899999999999998888999999999999999999999998876653
Q ss_pred CcceeEEcCCCCCCCCC
Q 003158 237 TETFILDFQNNNLTNIS 253 (843)
Q Consensus 237 ~~L~~L~l~~N~l~~~~ 253 (843)
++|+.|+|++|.++.-.
T Consensus 248 ~~L~~L~L~~N~~~~~c 264 (306)
T 2z66_A 248 SSLAFLNLTQNDFACTC 264 (306)
T ss_dssp TTCCEEECTTCCEECSG
T ss_pred ccCCEEEccCCCeeccc
Confidence 25779999999998754
No 308
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.93 E-value=1.3e-24 Score=238.20 Aligned_cols=248 Identities=27% Similarity=0.385 Sum_probs=208.9
Q ss_pred CccccccCCccccCCCCCCEEEccCCcCCccCccccCCCCCCcEEEcccCcCCccCccccccCCCCCEEEccCCccccCC
Q 003158 2 WNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQI 81 (843)
Q Consensus 2 ~N~i~~~~p~~i~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 81 (843)
+|+++ .+| .+..+++|++|+|++|+++.. +. +.++++|++|+|++|.++. ++ .+.++++|++|++++|.+++.
T Consensus 53 ~~~i~-~~~-~~~~~~~L~~L~l~~n~i~~~-~~-~~~l~~L~~L~L~~n~i~~-~~-~~~~l~~L~~L~l~~n~i~~~- 125 (347)
T 4fmz_A 53 GEKVA-SIQ-GIEYLTNLEYLNLNGNQITDI-SP-LSNLVKLTNLYIGTNKITD-IS-ALQNLTNLRELYLNEDNISDI- 125 (347)
T ss_dssp SSCCC-CCT-TGGGCTTCCEEECCSSCCCCC-GG-GTTCTTCCEEECCSSCCCC-CG-GGTTCTTCSEEECTTSCCCCC-
T ss_pred CCccc-cch-hhhhcCCccEEEccCCccccc-hh-hhcCCcCCEEEccCCcccC-ch-HHcCCCcCCEEECcCCcccCc-
Confidence 45666 454 488999999999999999954 44 9999999999999999995 33 699999999999999999954
Q ss_pred CcccCCCCCCceeeccCCCCCCCCCcccCCCCCCcEEEcCCCCCCCCCCCccccCCCCCcEEEcCCCCCCCCCCCCCCCC
Q 003158 82 PPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMPDLSRIP 161 (843)
Q Consensus 82 ~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~ 161 (843)
+. +..+++|+.|++++|..... +..+..+++|++|++++|.+.+ ++. +..+++|+.|++++|.++++++ +..++
T Consensus 126 ~~-~~~l~~L~~L~l~~n~~~~~-~~~~~~l~~L~~L~l~~~~~~~--~~~-~~~l~~L~~L~l~~n~l~~~~~-~~~l~ 199 (347)
T 4fmz_A 126 SP-LANLTKMYSLNLGANHNLSD-LSPLSNMTGLNYLTVTESKVKD--VTP-IANLTDLYSLSLNYNQIEDISP-LASLT 199 (347)
T ss_dssp GG-GTTCTTCCEEECTTCTTCCC-CGGGTTCTTCCEEECCSSCCCC--CGG-GGGCTTCSEEECTTSCCCCCGG-GGGCT
T ss_pred hh-hccCCceeEEECCCCCCccc-ccchhhCCCCcEEEecCCCcCC--chh-hccCCCCCEEEccCCccccccc-ccCCC
Confidence 33 89999999999999976644 4459999999999999999975 333 8899999999999999998766 88899
Q ss_pred CCCEEEcccCcCCCCCCCCCCCcCcCEEEccCCcCCCCCCcccCCCCCCcEEeCcCccCCCCCCchhhccccCCCCccee
Q 003158 162 NLGYLDLSSNQLNGSIPPGRLSLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFI 241 (843)
Q Consensus 162 ~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~l~~~~L~~ 241 (843)
+|+.|++++|.+++..+ .....+|+.|+|++|.+++..+ +..+++|++|++++|.+++. ..+.. .++|+.
T Consensus 200 ~L~~L~l~~n~l~~~~~-~~~~~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~~~~-----l~~L~~ 269 (347)
T 4fmz_A 200 SLHYFTAYVNQITDITP-VANMTRLNSLKIGNNKITDLSP--LANLSQLTWLEIGTNQISDI--NAVKD-----LTKLKM 269 (347)
T ss_dssp TCCEEECCSSCCCCCGG-GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC--GGGTT-----CTTCCE
T ss_pred ccceeecccCCCCCCch-hhcCCcCCEEEccCCccCCCcc--hhcCCCCCEEECCCCccCCC--hhHhc-----CCCcCE
Confidence 99999999999985443 3334589999999999996544 99999999999999999853 33433 346779
Q ss_pred EEcCCCCCCCCCCCCcCCCCcEEEeccCccc
Q 003158 242 LDFQNNNLTNISGSFNIPPNVTVRLRGNPFC 272 (843)
Q Consensus 242 L~l~~N~l~~~~~~~~~~~l~~l~l~~Np~~ 272 (843)
|++++|++++++....++.++.|++++|++.
T Consensus 270 L~l~~n~l~~~~~~~~l~~L~~L~L~~n~l~ 300 (347)
T 4fmz_A 270 LNVGSNQISDISVLNNLSQLNSLFLNNNQLG 300 (347)
T ss_dssp EECCSSCCCCCGGGGGCTTCSEEECCSSCCC
T ss_pred EEccCCccCCChhhcCCCCCCEEECcCCcCC
Confidence 9999999999966558999999999999975
No 309
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.93 E-value=2.9e-24 Score=243.74 Aligned_cols=203 Identities=20% Similarity=0.196 Sum_probs=141.3
Q ss_pred CccccccCCccccCCCCCCEEEccCCcCCccCccccCCCCCCcEEEcccCcCCccCccccccCCCCCEEEccCCccccCC
Q 003158 2 WNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQI 81 (843)
Q Consensus 2 ~N~i~~~~p~~i~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 81 (843)
+|+|++. | .|..+++|++|+|++|++++. | ++.+++|++|+|++|++++. + ++++++|++|+|++|++++.
T Consensus 51 ~n~l~~~-~-~l~~l~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~~-~--~~~l~~L~~L~L~~N~l~~l- 121 (457)
T 3bz5_A 51 NSSITDM-T-GIEKLTGLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLTNL-D--VTPLTKLTYLNCDTNKLTKL- 121 (457)
T ss_dssp SSCCCCC-T-TGGGCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSCC-C--CTTCTTCCEEECCSSCCSCC-
T ss_pred CCCcccC-h-hhcccCCCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCcee-e--cCCCCcCCEEECCCCcCCee-
Confidence 5778864 5 688899999999999999864 4 88889999999999998864 3 88888999999999988853
Q ss_pred CcccCCCCCCceeeccCCCCCCCCCcccCCCCCCcEEEcCCCCCCCCCCCccccCCCCCcEEEcCCCCCCCCCCCCCCCC
Q 003158 82 PPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMPDLSRIP 161 (843)
Q Consensus 82 ~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~ 161 (843)
+ ++.+++|++|++++|++++. .+..+++|++|++++|+..+ .+ .+..+++|+.|++++|++++++ +..++
T Consensus 122 ~--~~~l~~L~~L~l~~N~l~~l---~l~~l~~L~~L~l~~n~~~~-~~--~~~~l~~L~~L~ls~n~l~~l~--l~~l~ 191 (457)
T 3bz5_A 122 D--VSQNPLLTYLNCARNTLTEI---DVSHNTQLTELDCHLNKKIT-KL--DVTPQTQLTTLDCSFNKITELD--VSQNK 191 (457)
T ss_dssp C--CTTCTTCCEEECTTSCCSCC---CCTTCTTCCEEECTTCSCCC-CC--CCTTCTTCCEEECCSSCCCCCC--CTTCT
T ss_pred c--CCCCCcCCEEECCCCcccee---ccccCCcCCEEECCCCCccc-cc--ccccCCcCCEEECCCCccceec--cccCC
Confidence 4 78888888888888888864 26677777777777775433 22 3566667777777777766653 55666
Q ss_pred CCCEEEcccCcCCCCCCCCCCCcCcCEEEccCCcCCCCCCcccCCCCCCcEEeCcCccCCCCCCchh
Q 003158 162 NLGYLDLSSNQLNGSIPPGRLSLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSI 228 (843)
Q Consensus 162 ~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~ 228 (843)
+|+.|++++|++++. + .....+|+.|+|++|++++ +| +..+++|+.|++++|+|++..+..+
T Consensus 192 ~L~~L~l~~N~l~~~-~-l~~l~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~l~~N~l~~~~~~~l 253 (457)
T 3bz5_A 192 LLNRLNCDTNNITKL-D-LNQNIQLTFLDCSSNKLTE-ID--VTPLTQLTYFDCSVNPLTELDVSTL 253 (457)
T ss_dssp TCCEEECCSSCCSCC-C-CTTCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSCCCCTTC
T ss_pred CCCEEECcCCcCCee-c-cccCCCCCEEECcCCcccc-cC--ccccCCCCEEEeeCCcCCCcCHHHC
Confidence 666666666666632 2 1222356666666666665 33 5566666666666666665444333
No 310
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.93 E-value=3.7e-25 Score=259.48 Aligned_cols=258 Identities=19% Similarity=0.202 Sum_probs=213.3
Q ss_pred cccccCCccccCCCCCCEEEccCCcCCccCccccCCCCCCcEEEcccCcCCccCccccccCCCCCEEEccCCccccCCCc
Q 003158 4 KISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPP 83 (843)
Q Consensus 4 ~i~~~~p~~i~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~ 83 (843)
+++ .+|..+. ++++.|+|++|++++..+..|.++++|++|+|++|++++..+..|.++++|++|+|++|.+++..+.
T Consensus 18 ~l~-~ip~~l~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~ 94 (570)
T 2z63_A 18 NFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALG 94 (570)
T ss_dssp CCS-SCCSSSC--SSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTT
T ss_pred Ccc-ccCCCcc--ccccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHh
Confidence 444 6776554 5799999999999988888999999999999999999988888899999999999999999988888
Q ss_pred ccCCCCCCceeeccCCCCCCCCCcccCCCCCCcEEEcCCCCCCCCCCCccccCCCCCcEEEcCCCCCCCCCC-CCCCCCC
Q 003158 84 ELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMP-DLSRIPN 162 (843)
Q Consensus 84 ~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~l~~ 162 (843)
.|.++++|++|+|++|++++..+..++++++|++|+|++|.+.+..+|..|.++++|++|++++|++++.++ .+..+++
T Consensus 95 ~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~ 174 (570)
T 2z63_A 95 AFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQ 174 (570)
T ss_dssp TTTTCTTCCEEECTTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGGGGHHHHT
T ss_pred hhcCccccccccccccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccceecHHHccchhc
Confidence 999999999999999999977666799999999999999999865678999999999999999999998776 4777777
Q ss_pred C----CEEEcccCcCCCCCCCCCCCcCcCEEEccCC--------------------------------------------
Q 003158 163 L----GYLDLSSNQLNGSIPPGRLSLNITTIKLSNN-------------------------------------------- 194 (843)
Q Consensus 163 L----~~L~Ls~N~l~~~~p~~~~~~~L~~L~Ls~N-------------------------------------------- 194 (843)
| +.|++++|.+++..+..+...+|+.|+|++|
T Consensus 175 L~~~~~~L~l~~n~l~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~l 254 (570)
T 2z63_A 175 MPLLNLSLDLSLNPMNFIQPGAFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGL 254 (570)
T ss_dssp CTTCCCEEECTTCCCCEECTTTTTTCEEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCEECCTTTTGGG
T ss_pred cchhhhhcccCCCCceecCHHHhccCcceeEecccccccccchhhhhcCccccceeeeccccccCchhhhhcchhhhccc
Confidence 7 8999999999866555554457888888877
Q ss_pred --------------cCCCCCCcccCCCCCCcEEeCcCccCCCCCCchhhccccCCCCcceeEEcCCCCCCCCCCCCcCCC
Q 003158 195 --------------KLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGSFNIPP 260 (843)
Q Consensus 195 --------------~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~l~~~~L~~L~l~~N~l~~~~~~~~~~~ 260 (843)
.+.+..|..|..+++|+.|++++|.++ .+|..+..+ +|+.|++++|+++.++. ..++.
T Consensus 255 ~~l~l~~l~l~~~~~~~~~~~~~~~~l~~L~~L~l~~~~l~-~l~~~~~~~------~L~~L~l~~n~~~~l~~-~~l~~ 326 (570)
T 2z63_A 255 CNLTIEEFRLAYLDYYLDDIIDLFNCLTNVSSFSLVSVTIE-RVKDFSYNF------GWQHLELVNCKFGQFPT-LKLKS 326 (570)
T ss_dssp GGSEEEEEEEEETTEEESCSTTTTGGGTTCSEEEEESCEEC-SCCBCCSCC------CCSEEEEESCBCSSCCB-CBCSS
T ss_pred cccchhhhhhhcchhhhhhchhhhcCcCcccEEEecCccch-hhhhhhccC------CccEEeeccCcccccCc-ccccc
Confidence 344556677778888888999888887 577766543 45688888888887765 46788
Q ss_pred CcEEEeccCccc
Q 003158 261 NVTVRLRGNPFC 272 (843)
Q Consensus 261 l~~l~l~~Np~~ 272 (843)
++.|++.+|...
T Consensus 327 L~~L~l~~n~~~ 338 (570)
T 2z63_A 327 LKRLTFTSNKGG 338 (570)
T ss_dssp CCEEEEESCBSC
T ss_pred cCEEeCcCCccc
Confidence 888888887753
No 311
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.93 E-value=2.6e-26 Score=248.42 Aligned_cols=244 Identities=18% Similarity=0.177 Sum_probs=168.5
Q ss_pred CCCCEEEccCCcCCccCccccCCCCCCcEEEcccCcCCccCccccccCCCCCEEEccCCccccCCCcccCCCCCCceeec
Q 003158 17 KSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLL 96 (843)
Q Consensus 17 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L 96 (843)
.+++.++++.+.+.......+..+++|++|+|++|++++..|..|.++++|+.|+|++|.+++..+ +..+++|++|+|
T Consensus 10 ~~l~i~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~L 87 (317)
T 3o53_A 10 NRYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDL 87 (317)
T ss_dssp TEEEEESCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEEC
T ss_pred CceeEeeccccchhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEEC
Confidence 346666777777765566666667777777777777776666777777777777777777775443 777777777777
Q ss_pred cCCCCCCCCCcccCCCCCCcEEEcCCCCCCCCCCCccccCCCCCcEEEcCCCCCCCCCC-CCCCCCCCCEEEcccCcCCC
Q 003158 97 DNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMP-DLSRIPNLGYLDLSSNQLNG 175 (843)
Q Consensus 97 ~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~ 175 (843)
++|++++. ...++|++|++++|++++ ++ ...+++|+.|+|++|+++++++ .+..+++|+.|+|++|.+++
T Consensus 88 s~n~l~~l-----~~~~~L~~L~l~~n~l~~--~~--~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 158 (317)
T 3o53_A 88 NNNYVQEL-----LVGPSIETLHAANNNISR--VS--CSRGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDT 158 (317)
T ss_dssp CSSEEEEE-----EECTTCCEEECCSSCCSE--EE--ECCCSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCE
T ss_pred cCCccccc-----cCCCCcCEEECCCCccCC--cC--ccccCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCc
Confidence 77777632 233677777777777764 22 1235677777777777777666 46777777777777777775
Q ss_pred CCCCCCC--CcCcCEEEccCCcCCCCCCcccCCCCCCcEEeCcCccCCCCCCchhhccccCCCCcceeEEcCCCCCCCCC
Q 003158 176 SIPPGRL--SLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNIS 253 (843)
Q Consensus 176 ~~p~~~~--~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~l~~~~L~~L~l~~N~l~~~~ 253 (843)
..+.... ..+|+.|+|++|.|++. + ....+++|++|+|++|+|++ +|..+..+. +|+.|+|++|+|+.++
T Consensus 159 ~~~~~~~~~l~~L~~L~L~~N~l~~~-~-~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~-----~L~~L~L~~N~l~~l~ 230 (317)
T 3o53_A 159 VNFAELAASSDTLEHLNLQYNFIYDV-K-GQVVFAKLKTLDLSSNKLAF-MGPEFQSAA-----GVTWISLRNNKLVLIE 230 (317)
T ss_dssp EEGGGGGGGTTTCCEEECTTSCCCEE-E-CCCCCTTCCEEECCSSCCCE-ECGGGGGGT-----TCSEEECTTSCCCEEC
T ss_pred ccHHHHhhccCcCCEEECCCCcCccc-c-cccccccCCEEECCCCcCCc-chhhhcccC-----cccEEECcCCcccchh
Confidence 4444332 24777788888877754 2 33357788888888888874 444455443 4557888888888877
Q ss_pred CCC-cCCCCcEEEeccCcccccCCccc
Q 003158 254 GSF-NIPPNVTVRLRGNPFCLNTNAEQ 279 (843)
Q Consensus 254 ~~~-~~~~l~~l~l~~Np~~c~~~~~~ 279 (843)
..+ .++.++.|++++|+|.|+|...+
T Consensus 231 ~~~~~l~~L~~L~l~~N~~~~~~~~~~ 257 (317)
T 3o53_A 231 KALRFSQNLEHFDLRGNGFHCGTLRDF 257 (317)
T ss_dssp TTCCCCTTCCEEECTTCCCBHHHHHHH
T ss_pred hHhhcCCCCCEEEccCCCccCcCHHHH
Confidence 665 67888889999999988764433
No 312
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.93 E-value=1.7e-24 Score=228.55 Aligned_cols=191 Identities=23% Similarity=0.322 Sum_probs=100.6
Q ss_pred CCCEEEccCCccccCCCcccCCCCCCceeeccCCCCCCCCCcccCCCCCCcEEEcCCCCCCCCCCCccccCCCCCcEEEc
Q 003158 66 KTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSL 145 (843)
Q Consensus 66 ~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L 145 (843)
+|+.|+|++|+|+...+..|.++++|++|+|++|+++...+..|.++++|++|+|++|++.+ ..+..|.++++|+.|+|
T Consensus 38 ~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~l~~-~~~~~~~~l~~L~~L~l 116 (270)
T 2o6q_A 38 DTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQA-LPIGVFDQLVNLAELRL 116 (270)
T ss_dssp TCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCSSCCCC-CCTTTTTTCSSCCEEEC
T ss_pred CCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECCCCcCCc-CCHhHcccccCCCEEEC
Confidence 34444444444443333344444444444444444443333344444555555555555443 22234445555555555
Q ss_pred CCCCCCCCCCC-CCCCCCCCEEEcccCcCCCCCCCCC-C-CcCcCEEEccCCcCCCCCCcccCCCCCCcEEeCcCccCCC
Q 003158 146 RNCSLQGPMPD-LSRIPNLGYLDLSSNQLNGSIPPGR-L-SLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSG 222 (843)
Q Consensus 146 ~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~~-~-~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 222 (843)
++|+++++++. |..+++|+.|+|++|.++ .+|... . ..+|+.|+|++|.+++..+..|.++++|++|+|++|+|++
T Consensus 117 ~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 195 (270)
T 2o6q_A 117 DRNQLKSLPPRVFDSLTKLTYLSLGYNELQ-SLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKR 195 (270)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSC
T ss_pred CCCccCeeCHHHhCcCcCCCEEECCCCcCC-ccCHhHccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCc
Confidence 55555554443 455555555555555555 222211 1 1244444444444444444556666777777777766664
Q ss_pred CCCchhhccccCCCCcceeEEcCCCCCCCCCCCCcCCCCcEEEeccCcccccCC-cccccCCCC
Q 003158 223 SIPSSIWQSRTLNATETFILDFQNNNLTNISGSFNIPPNVTVRLRGNPFCLNTN-AEQFCGSHS 285 (843)
Q Consensus 223 ~~p~~~~~l~~l~~~~L~~L~l~~N~l~~~~~~~~~~~l~~l~l~~Np~~c~~~-~~~~~~~~~ 285 (843)
..+..+. .++.+..|++++|||.|+|. +.++..|+.
T Consensus 196 ~~~~~~~---------------------------~l~~L~~L~l~~N~~~c~c~~~~~~~~~l~ 232 (270)
T 2o6q_A 196 VPEGAFD---------------------------SLEKLKMLQLQENPWDCTCNGIIYMAKWLK 232 (270)
T ss_dssp CCTTTTT---------------------------TCTTCCEEECCSSCBCCSSSSSHHHHHHHH
T ss_pred CCHHHhc---------------------------cccCCCEEEecCCCeeCCCccHHHHHHHHH
Confidence 3333222 35667788999999999997 666666764
No 313
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.92 E-value=1.6e-24 Score=247.40 Aligned_cols=251 Identities=25% Similarity=0.344 Sum_probs=191.7
Q ss_pred CccccccCCccccCCCCCCEEEccCCcCCccCccccCCCCCCcEEEcccCcCCccCccccccCCCCCEEEccCCccccCC
Q 003158 2 WNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQI 81 (843)
Q Consensus 2 ~N~i~~~~p~~i~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 81 (843)
+|++++..| +.++++|++|+|++|++++..+ ++++++|++|+|++|.+++..+ +.++++|++|++++|.+++..
T Consensus 77 ~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~ 150 (466)
T 1o6v_A 77 NNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLELSSNTISDIS 150 (466)
T ss_dssp SSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GTTCTTCSEEEEEEEEECCCG
T ss_pred CCccCCchh--hhccccCCEEECCCCccccChh--hcCCCCCCEEECCCCCCCCChH--HcCCCCCCEEECCCCccCCCh
Confidence 577775443 8888999999999999885554 8888999999999998885433 888888888888888877431
Q ss_pred C-------------------cccCCCCCCceeeccCCCCCCCCCcccCCCCCCcEEEcCCCCCCCCCCCccccCCCCCcE
Q 003158 82 P-------------------PELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLK 142 (843)
Q Consensus 82 ~-------------------~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~ 142 (843)
. ..+.++++|+.|++++|++++. ..+..+++|++|++++|.+.+ ..+ +..+++|+.
T Consensus 151 ~~~~l~~L~~L~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~-~~~--~~~l~~L~~ 225 (466)
T 1o6v_A 151 ALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISD-ITP--LGILTNLDE 225 (466)
T ss_dssp GGTTCTTCSEEEEEESCCCCGGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCC-CGG--GGGCTTCCE
T ss_pred hhccCCcccEeecCCcccCchhhccCCCCCEEECcCCcCCCC--hhhccCCCCCEEEecCCcccc-ccc--ccccCCCCE
Confidence 1 1266778899999999998854 458888999999999999875 222 777888999
Q ss_pred EEcCCCCCCCCCCCCCCCCCCCEEEcccCcCCCCCCCCCCCcCcCEEEccCCcCCCCCCcccCCCCCCcEEeCcCccCCC
Q 003158 143 LSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLSLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSG 222 (843)
Q Consensus 143 L~L~~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 222 (843)
|++++|+++++ +.+..+++|+.|++++|.+++..+ .....+|+.|+|++|.+++..+ +..+++|+.|+|++|++++
T Consensus 226 L~l~~n~l~~~-~~l~~l~~L~~L~l~~n~l~~~~~-~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~ 301 (466)
T 1o6v_A 226 LSLNGNQLKDI-GTLASLTNLTDLDLANNQISNLAP-LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLED 301 (466)
T ss_dssp EECCSSCCCCC-GGGGGCTTCSEEECCSSCCCCCGG-GTTCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCSC
T ss_pred EECCCCCcccc-hhhhcCCCCCEEECCCCccccchh-hhcCCCCCEEECCCCccCcccc--ccCCCccCeEEcCCCcccC
Confidence 99999888875 457788888888888888885444 3334478888888888886544 7888888888888888886
Q ss_pred CCCchhhccccCCCCcceeEEcCCCCCCCCCCCCcCCCCcEEEeccCccccc
Q 003158 223 SIPSSIWQSRTLNATETFILDFQNNNLTNISGSFNIPPNVTVRLRGNPFCLN 274 (843)
Q Consensus 223 ~~p~~~~~l~~l~~~~L~~L~l~~N~l~~~~~~~~~~~l~~l~l~~Np~~c~ 274 (843)
..+ +.. .++|+.|+|++|+++++++...++.++.|++++|++...
T Consensus 302 ~~~--~~~-----l~~L~~L~L~~n~l~~~~~~~~l~~L~~L~l~~n~l~~~ 346 (466)
T 1o6v_A 302 ISP--ISN-----LKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDV 346 (466)
T ss_dssp CGG--GGG-----CTTCSEEECCSSCCSCCGGGGGCTTCCEEECCSSCCCCC
T ss_pred chh--hcC-----CCCCCEEECcCCcCCCchhhccCccCCEeECCCCccCCc
Confidence 443 333 345668888888888877655788888888888877543
No 314
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.92 E-value=2e-24 Score=246.59 Aligned_cols=250 Identities=28% Similarity=0.358 Sum_probs=210.5
Q ss_pred CccccccCCccccCCCCCCEEEccCCcCCccCccccCCCCCCcEEEcccCcCCccCccccccCCCCCEEEccCCccccCC
Q 003158 2 WNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQI 81 (843)
Q Consensus 2 ~N~i~~~~p~~i~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 81 (843)
.|+++ .+| .+..+++|++|+|++|.+++..+ +.++++|++|++++|.+++..+ +.++++|++|+|++|.+++..
T Consensus 55 ~~~i~-~l~-~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~ 128 (466)
T 1o6v_A 55 RLGIK-SID-GVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQITDID 128 (466)
T ss_dssp SSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCG
T ss_pred CCCCc-cCc-chhhhcCCCEEECCCCccCCchh--hhccccCCEEECCCCccccChh--hcCCCCCCEEECCCCCCCCCh
Confidence 35566 455 48899999999999999996544 9999999999999999996555 999999999999999999653
Q ss_pred CcccCCCCCCceeeccCCCCCCCCC-------------------cccCCCCCCcEEEcCCCCCCCCCCCccccCCCCCcE
Q 003158 82 PPELSRLPSLVHMLLDNNNLTGYLP-------------------PELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLK 142 (843)
Q Consensus 82 ~~~l~~l~~L~~L~L~~N~l~~~~~-------------------~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~ 142 (843)
+ +.++++|++|+|++|++++... ..+.++++|++|+|++|.+.+ + ..+..+++|+.
T Consensus 129 ~--~~~l~~L~~L~l~~n~l~~~~~~~~l~~L~~L~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~--~-~~l~~l~~L~~ 203 (466)
T 1o6v_A 129 P--LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSD--I-SVLAKLTNLES 203 (466)
T ss_dssp G--GTTCTTCSEEEEEEEEECCCGGGTTCTTCSEEEEEESCCCCGGGTTCTTCCEEECCSSCCCC--C-GGGGGCTTCSE
T ss_pred H--HcCCCCCCEEECCCCccCCChhhccCCcccEeecCCcccCchhhccCCCCCEEECcCCcCCC--C-hhhccCCCCCE
Confidence 3 8999999999999999885311 236678899999999999975 2 45889999999
Q ss_pred EEcCCCCCCCCCCCCCCCCCCCEEEcccCcCCCCCCCCCCCcCcCEEEccCCcCCCCCCcccCCCCCCcEEeCcCccCCC
Q 003158 143 LSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLSLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSG 222 (843)
Q Consensus 143 L~L~~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 222 (843)
|++++|.+++.++ +..+++|+.|++++|.++ .++......+|+.|++++|.+++..+ +..+++|++|++++|.+++
T Consensus 204 L~l~~n~l~~~~~-~~~l~~L~~L~l~~n~l~-~~~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~ 279 (466)
T 1o6v_A 204 LIATNNQISDITP-LGILTNLDELSLNGNQLK-DIGTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISN 279 (466)
T ss_dssp EECCSSCCCCCGG-GGGCTTCCEEECCSSCCC-CCGGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCC
T ss_pred EEecCCccccccc-ccccCCCCEEECCCCCcc-cchhhhcCCCCCEEECCCCccccchh--hhcCCCCCEEECCCCccCc
Confidence 9999999998776 778999999999999998 45544444589999999999997655 8999999999999999996
Q ss_pred CCCchhhccccCCCCcceeEEcCCCCCCCCCCCCcCCCCcEEEeccCcccc
Q 003158 223 SIPSSIWQSRTLNATETFILDFQNNNLTNISGSFNIPPNVTVRLRGNPFCL 273 (843)
Q Consensus 223 ~~p~~~~~l~~l~~~~L~~L~l~~N~l~~~~~~~~~~~l~~l~l~~Np~~c 273 (843)
..+ +.. .++|+.|++++|++++++....++.++.|++++|.+..
T Consensus 280 ~~~--~~~-----l~~L~~L~L~~n~l~~~~~~~~l~~L~~L~L~~n~l~~ 323 (466)
T 1o6v_A 280 ISP--LAG-----LTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISD 323 (466)
T ss_dssp CGG--GTT-----CTTCSEEECCSSCCSCCGGGGGCTTCSEEECCSSCCSC
T ss_pred ccc--ccC-----CCccCeEEcCCCcccCchhhcCCCCCCEEECcCCcCCC
Confidence 544 433 45677999999999999875689999999999998753
No 315
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.92 E-value=3.6e-24 Score=243.07 Aligned_cols=238 Identities=18% Similarity=0.183 Sum_probs=200.6
Q ss_pred cccccCCccccCCCCCCEEEccCCcCCccCccccCCCCCCcEEEcccCcCCccCccccccCCCCCEEEccCCccccCCCc
Q 003158 4 KISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPP 83 (843)
Q Consensus 4 ~i~~~~p~~i~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~ 83 (843)
.+.+..+..++++++|++|+|++|.+++. | .++.+++|++|+|++|++++. + +..+++|++|+|++|.|++. +
T Consensus 29 ~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~-~-~l~~l~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~~-~- 101 (457)
T 3bz5_A 29 EMQATDTISEEQLATLTSLDCHNSSITDM-T-GIEKLTGLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLTNL-D- 101 (457)
T ss_dssp TCCTTSEEEHHHHTTCCEEECCSSCCCCC-T-TGGGCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSCC-C-
T ss_pred CcCcccccChhHcCCCCEEEccCCCcccC-h-hhcccCCCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCcee-e-
Confidence 34556677889999999999999999964 5 799999999999999999964 4 89999999999999999965 3
Q ss_pred ccCCCCCCceeeccCCCCCCCCCcccCCCCCCcEEEcCCCCCCCCCCCccccCCCCCcEEEcCCCCCCCCCCCCCCCCCC
Q 003158 84 ELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMPDLSRIPNL 163 (843)
Q Consensus 84 ~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L 163 (843)
++++++|++|+|++|++++. + +..+++|++|+|++|++++ + .++++++|+.|++++|+..+.. .+..+++|
T Consensus 102 -~~~l~~L~~L~L~~N~l~~l-~--~~~l~~L~~L~l~~N~l~~--l--~l~~l~~L~~L~l~~n~~~~~~-~~~~l~~L 172 (457)
T 3bz5_A 102 -VTPLTKLTYLNCDTNKLTKL-D--VSQNPLLTYLNCARNTLTE--I--DVSHNTQLTELDCHLNKKITKL-DVTPQTQL 172 (457)
T ss_dssp -CTTCTTCCEEECCSSCCSCC-C--CTTCTTCCEEECTTSCCSC--C--CCTTCTTCCEEECTTCSCCCCC-CCTTCTTC
T ss_pred -cCCCCcCCEEECCCCcCCee-c--CCCCCcCCEEECCCCccce--e--ccccCCcCCEEECCCCCccccc-ccccCCcC
Confidence 89999999999999999974 4 8999999999999999986 3 3889999999999999654433 58889999
Q ss_pred CEEEcccCcCCCCCCCCCCCcCcCEEEccCCcCCCCCCcccCCCCCCcEEeCcCccCCCCCCchhhccccCCCCcceeEE
Q 003158 164 GYLDLSSNQLNGSIPPGRLSLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILD 243 (843)
Q Consensus 164 ~~L~Ls~N~l~~~~p~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~l~~~~L~~L~ 243 (843)
+.|++++|++++ +| .....+|+.|++++|.+++. .+..+++|+.|+|++|+|++ +| +.. .++|+.|+
T Consensus 173 ~~L~ls~n~l~~-l~-l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~-ip--~~~-----l~~L~~L~ 239 (457)
T 3bz5_A 173 TTLDCSFNKITE-LD-VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLTE-ID--VTP-----LTQLTYFD 239 (457)
T ss_dssp CEEECCSSCCCC-CC-CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCSC-CC--CTT-----CTTCSEEE
T ss_pred CEEECCCCccce-ec-cccCCCCCEEECcCCcCCee---ccccCCCCCEEECcCCcccc-cC--ccc-----cCCCCEEE
Confidence 999999999995 66 33345899999999999976 48999999999999999997 56 443 35677999
Q ss_pred cCCCCCCCCCCCCcCCCCcEEEeccCcc
Q 003158 244 FQNNNLTNISGSFNIPPNVTVRLRGNPF 271 (843)
Q Consensus 244 l~~N~l~~~~~~~~~~~l~~l~l~~Np~ 271 (843)
+++|+|++++. ..++.+..|++.+|.+
T Consensus 240 l~~N~l~~~~~-~~l~~L~~L~l~~n~L 266 (457)
T 3bz5_A 240 CSVNPLTELDV-STLSKLTTLHCIQTDL 266 (457)
T ss_dssp CCSSCCSCCCC-TTCTTCCEEECTTCCC
T ss_pred eeCCcCCCcCH-HHCCCCCEEeccCCCC
Confidence 99999999873 2466666665555544
No 316
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.92 E-value=3.2e-26 Score=264.53 Aligned_cols=190 Identities=14% Similarity=0.187 Sum_probs=145.7
Q ss_pred CCCCcccccCCeeEEEEEeCCCcEEEEEEeccCChh--------hHHHHHHHHHHHHhccCCcccceeeeeecCCcEEEE
Q 003158 514 NSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQ--------GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLV 585 (843)
Q Consensus 514 ~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--------~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV 585 (843)
...+.||+|+||+||+|.. .++.+|+|+....... ..+++.+|++++++++||||+++..++...+..++|
T Consensus 339 ~~~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lV 417 (540)
T 3en9_A 339 IPEHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIM 417 (540)
T ss_dssp ---------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEE
T ss_pred CCCCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEE
Confidence 4467899999999999954 5788899886542211 134589999999999999999777777777788999
Q ss_pred EecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCC
Q 003158 586 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVP 665 (843)
Q Consensus 586 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~ 665 (843)
|||+++++|.+++.. +..++.|+++||+|||+++ |+||||||+|||+++ .+||+|||+|+.....
T Consensus 418 mE~~~ggsL~~~l~~----------~~~i~~qi~~aL~~LH~~g---IiHrDiKp~NILl~~--~~kL~DFGla~~~~~~ 482 (540)
T 3en9_A 418 MSYINGKLAKDVIED----------NLDIAYKIGEIVGKLHKND---VIHNDLTTSNFIFDK--DLYIIDFGLGKISNLD 482 (540)
T ss_dssp EECCCSEEHHHHSTT----------CTHHHHHHHHHHHHHHHTT---EECTTCCTTSEEESS--SEEECCCTTCEECCCH
T ss_pred EECCCCCCHHHHHHH----------HHHHHHHHHHHHHHHHHCc---CccCCCCHHHEEECC--eEEEEECccCEECCCc
Confidence 999999999999864 4579999999999999999 999999999999999 9999999999876432
Q ss_pred CCCCcccceeeeeecccCCccCchhccc--CCCCchhhhHHHHHHHHHHHhCCCCC
Q 003158 666 DIEGIVPAHVSTVVKGTPGYLDPEYFLT--HKLTDKSDVYSLGVVFLELLTGMQPI 719 (843)
Q Consensus 666 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~sDvwS~G~~l~elltg~~pf 719 (843)
...............||+.|||||++.. ..|+..+|+|+..+-..+-+.++.+|
T Consensus 483 ~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY 538 (540)
T 3en9_A 483 EDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARY 538 (540)
T ss_dssp HHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCC
T ss_pred cccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccc
Confidence 1000000001235679999999999987 66788899999999988888877766
No 317
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.92 E-value=1.4e-25 Score=242.54 Aligned_cols=243 Identities=20% Similarity=0.192 Sum_probs=202.0
Q ss_pred CCccccCCCCCCEEEccCCcCCccCccccCCCCCCcEEEcccCcCCccCccccccCCCCCEEEccCCccccCCCcccCCC
Q 003158 9 IPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRL 88 (843)
Q Consensus 9 ~p~~i~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l 88 (843)
+...+..+++|++|+|++|++++..|..|+++++|++|+|++|.+++..+ +..+++|++|+|++|.|++.. ..
T Consensus 26 ~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~n~l~~l~-----~~ 98 (317)
T 3o53_A 26 LASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELL-----VG 98 (317)
T ss_dssp HHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECCSSEEEEEE-----EC
T ss_pred HHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECcCCcccccc-----CC
Confidence 33445567799999999999998888999999999999999999996655 999999999999999998443 34
Q ss_pred CCCceeeccCCCCCCCCCcccCCCCCCcEEEcCCCCCCCCCCCccccCCCCCcEEEcCCCCCCCCCCC-C-CCCCCCCEE
Q 003158 89 PSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMPD-L-SRIPNLGYL 166 (843)
Q Consensus 89 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~-~~l~~L~~L 166 (843)
++|++|++++|++++..+.. +++|++|+|++|++++ ..+..+..+++|+.|+|++|.+++.++. + ..+++|+.|
T Consensus 99 ~~L~~L~l~~n~l~~~~~~~---~~~L~~L~l~~N~l~~-~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L 174 (317)
T 3o53_A 99 PSIETLHAANNNISRVSCSR---GQGKKNIYLANNKITM-LRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHL 174 (317)
T ss_dssp TTCCEEECCSSCCSEEEECC---CSSCEEEECCSSCCCS-GGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEE
T ss_pred CCcCEEECCCCccCCcCccc---cCCCCEEECCCCCCCC-ccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEE
Confidence 89999999999999665443 6789999999999986 4567889999999999999999987664 4 478999999
Q ss_pred EcccCcCCCCCCCCCCCcCcCEEEccCCcCCCCCCcccCCCCCCcEEeCcCccCCCCCCchhhccccCCCCcceeEEcCC
Q 003158 167 DLSSNQLNGSIPPGRLSLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQN 246 (843)
Q Consensus 167 ~Ls~N~l~~~~p~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~l~~~~L~~L~l~~ 246 (843)
+|++|.++ .++......+|+.|+|++|.|++. |..+..+++|+.|+|++|+|+ .+|..+..+ ++|+.|++++
T Consensus 175 ~L~~N~l~-~~~~~~~l~~L~~L~Ls~N~l~~l-~~~~~~l~~L~~L~L~~N~l~-~l~~~~~~l-----~~L~~L~l~~ 246 (317)
T 3o53_A 175 NLQYNFIY-DVKGQVVFAKLKTLDLSSNKLAFM-GPEFQSAAGVTWISLRNNKLV-LIEKALRFS-----QNLEHFDLRG 246 (317)
T ss_dssp ECTTSCCC-EEECCCCCTTCCEEECCSSCCCEE-CGGGGGGTTCSEEECTTSCCC-EECTTCCCC-----TTCCEEECTT
T ss_pred ECCCCcCc-ccccccccccCCEEECCCCcCCcc-hhhhcccCcccEEECcCCccc-chhhHhhcC-----CCCCEEEccC
Confidence 99999999 456555567999999999999965 445999999999999999999 577776544 4566999999
Q ss_pred CCCC-C-CCCCC-cCCCCcEEEeccCc
Q 003158 247 NNLT-N-ISGSF-NIPPNVTVRLRGNP 270 (843)
Q Consensus 247 N~l~-~-~~~~~-~~~~l~~l~l~~Np 270 (843)
|.++ . ++... .++.+..+++.+|+
T Consensus 247 N~~~~~~~~~~~~~~~~L~~l~l~~~~ 273 (317)
T 3o53_A 247 NGFHCGTLRDFFSKNQRVQTVAKQTVK 273 (317)
T ss_dssp CCCBHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred CCccCcCHHHHHhccccceEEECCCch
Confidence 9998 2 22222 56777777777443
No 318
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.91 E-value=3.5e-24 Score=242.90 Aligned_cols=242 Identities=24% Similarity=0.322 Sum_probs=146.8
Q ss_pred CccccccCCccccCCCCCCEEEccCCcCCccCccccCCCCCC-------------cEEEcccCcCCccCccccccCCCCC
Q 003158 2 WNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKL-------------DRIQIDQNYISGSLPKSFANLNKTR 68 (843)
Q Consensus 2 ~N~i~~~~p~~i~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L-------------~~L~L~~N~l~~~~~~~~~~l~~L~ 68 (843)
.|++ |.+|.+|+++++|++|++++|++.+.+|..++++++| ++|++++|++++ +|.. .++|+
T Consensus 20 ~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~~~l~~L~l~~~~l~~-lp~~---~~~L~ 94 (454)
T 1jl5_A 20 SSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGLSS-LPEL---PPHLE 94 (454)
T ss_dssp ---------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHHHTCSEEECTTSCCSC-CCSC---CTTCS
T ss_pred cCch-hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhccCCCEEEecCCcccc-CCCC---cCCCC
Confidence 4566 5777777777777777777777777777776666543 556666665553 2221 23444
Q ss_pred EEEccCCccccCCCccc----------------CCC-CCCceeeccCCCCCCCCCcccCCCCCCcEEEcCCCCCCCCCCC
Q 003158 69 HFHMNNNSISGQIPPEL----------------SRL-PSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIP 131 (843)
Q Consensus 69 ~L~Ls~N~l~~~~~~~l----------------~~l-~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~ 131 (843)
.|++++|.+++ +|..+ ..+ ++|++|+|++|++++ +| .|.++++|++|++++|++++ +|
T Consensus 95 ~L~l~~n~l~~-lp~~~~~L~~L~l~~n~l~~l~~~~~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~N~l~~--lp 169 (454)
T 1jl5_A 95 SLVASCNSLTE-LPELPQSLKSLLVDNNNLKALSDLPPLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNNSLKK--LP 169 (454)
T ss_dssp EEECCSSCCSS-CCCCCTTCCEEECCSSCCSCCCSCCTTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSC--CC
T ss_pred EEEccCCcCCc-cccccCCCcEEECCCCccCcccCCCCCCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCCCcCcc--cC
Confidence 44444444443 22211 011 467777777777775 45 47777777777777777763 44
Q ss_pred ccccCCCCCcEEEcCCCCCCCCCCCCCCCCCCCEEEcccCcCCCCCCCCCCCcCcCEEEccCCcCCCCCCcccCCCCCCc
Q 003158 132 ASYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLSLNITTIKLSNNKLTGTIPSNFSGLPRLQ 211 (843)
Q Consensus 132 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 211 (843)
..+ .+|+.|++++|++++++ .+..+++|+.|++++|++++ +|... .+|+.|++++|.++ .+| .+..+++|+
T Consensus 170 ~~~---~~L~~L~L~~n~l~~l~-~~~~l~~L~~L~l~~N~l~~-l~~~~--~~L~~L~l~~n~l~-~lp-~~~~l~~L~ 240 (454)
T 1jl5_A 170 DLP---PSLEFIAAGNNQLEELP-ELQNLPFLTAIYADNNSLKK-LPDLP--LSLESIVAGNNILE-ELP-ELQNLPFLT 240 (454)
T ss_dssp CCC---TTCCEEECCSSCCSSCC-CCTTCTTCCEEECCSSCCSS-CCCCC--TTCCEEECCSSCCS-SCC-CCTTCTTCC
T ss_pred CCc---ccccEEECcCCcCCcCc-cccCCCCCCEEECCCCcCCc-CCCCc--CcccEEECcCCcCC-ccc-ccCCCCCCC
Confidence 433 47777777777777754 57777888888888888773 44432 37888888888887 556 477888888
Q ss_pred EEeCcCccCCCCCCchhhccccCCCCcceeEEcCCCCCCCCCCCCcCCCCcEEEeccCcccc
Q 003158 212 RLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGSFNIPPNVTVRLRGNPFCL 273 (843)
Q Consensus 212 ~L~L~~N~l~~~~p~~~~~l~~l~~~~L~~L~l~~N~l~~~~~~~~~~~l~~l~l~~Np~~c 273 (843)
+|++++|++++ +|..+ ++|+.|++++|++++++.. .+.++.|++++|.+..
T Consensus 241 ~L~l~~N~l~~-l~~~~--------~~L~~L~l~~N~l~~l~~~--~~~L~~L~ls~N~l~~ 291 (454)
T 1jl5_A 241 TIYADNNLLKT-LPDLP--------PSLEALNVRDNYLTDLPEL--PQSLTFLDVSENIFSG 291 (454)
T ss_dssp EEECCSSCCSS-CCSCC--------TTCCEEECCSSCCSCCCCC--CTTCCEEECCSSCCSE
T ss_pred EEECCCCcCCc-ccccc--------cccCEEECCCCcccccCcc--cCcCCEEECcCCccCc
Confidence 88888888874 44321 3566777777777776543 3667777777776643
No 319
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.91 E-value=3.2e-25 Score=253.88 Aligned_cols=220 Identities=20% Similarity=0.181 Sum_probs=188.9
Q ss_pred CCCCCCcEEEcccCcCCccCccccccCCCCCEEEccCCccccCCCcccCCCCCCceeeccCCCCCCCCCcccCCCCCCcE
Q 003158 38 GYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLI 117 (843)
Q Consensus 38 ~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 117 (843)
..+++|++|+|++|.+++..|..|..+++|+.|+|++|.|++..+ |..+++|++|+|++|.|++.. ..++|++
T Consensus 31 ~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~-----~~~~L~~ 103 (487)
T 3oja_A 31 QSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELL-----VGPSIET 103 (487)
T ss_dssp TTGGGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEE-----ECTTCCE
T ss_pred ccCCCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCC-----CCCCcCE
Confidence 344589999999999998888999999999999999999997665 999999999999999998543 3389999
Q ss_pred EEcCCCCCCCCCCCccccCCCCCcEEEcCCCCCCCCCC-CCCCCCCCCEEEcccCcCCCCCCCCCC--CcCcCEEEccCC
Q 003158 118 LQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMP-DLSRIPNLGYLDLSSNQLNGSIPPGRL--SLNITTIKLSNN 194 (843)
Q Consensus 118 L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~--~~~L~~L~Ls~N 194 (843)
|+|++|.+++ ..+ ..+++|+.|+|++|.+++.++ .+..+++|+.|+|++|.+++.+|..+. ..+|+.|+|++|
T Consensus 104 L~L~~N~l~~-~~~---~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N 179 (487)
T 3oja_A 104 LHAANNNISR-VSC---SRGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYN 179 (487)
T ss_dssp EECCSSCCCC-EEE---CCCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTS
T ss_pred EECcCCcCCC-CCc---cccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCC
Confidence 9999999986 223 346899999999999999877 589999999999999999977776654 358999999999
Q ss_pred cCCCCCCcccCCCCCCcEEeCcCccCCCCCCchhhccccCCCCcceeEEcCCCCCCCCCCCC-cCCCCcEEEeccCcccc
Q 003158 195 KLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGSF-NIPPNVTVRLRGNPFCL 273 (843)
Q Consensus 195 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~l~~~~L~~L~l~~N~l~~~~~~~-~~~~l~~l~l~~Np~~c 273 (843)
.|++.. .+..+++|+.|+|++|.|++ +|..+..+. +|+.|+|++|+|+++|..+ .++.+..|++++|++.|
T Consensus 180 ~l~~~~--~~~~l~~L~~L~Ls~N~l~~-~~~~~~~l~-----~L~~L~Ls~N~l~~lp~~l~~l~~L~~L~l~~N~l~c 251 (487)
T 3oja_A 180 FIYDVK--GQVVFAKLKTLDLSSNKLAF-MGPEFQSAA-----GVTWISLRNNKLVLIEKALRFSQNLEHFDLRGNGFHC 251 (487)
T ss_dssp CCCEEE--CCCCCTTCCEEECCSSCCCE-ECGGGGGGT-----TCSEEECTTSCCCEECTTCCCCTTCCEEECTTCCBCH
T ss_pred cccccc--ccccCCCCCEEECCCCCCCC-CCHhHcCCC-----CccEEEecCCcCcccchhhccCCCCCEEEcCCCCCcC
Confidence 999763 35569999999999999996 444566554 5669999999999998876 68999999999999998
Q ss_pred cCC
Q 003158 274 NTN 276 (843)
Q Consensus 274 ~~~ 276 (843)
+|.
T Consensus 252 ~~~ 254 (487)
T 3oja_A 252 GTL 254 (487)
T ss_dssp HHH
T ss_pred cch
Confidence 764
No 320
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.91 E-value=9.5e-23 Score=231.13 Aligned_cols=240 Identities=26% Similarity=0.378 Sum_probs=136.3
Q ss_pred CccccccCCccccCCCCCCEEEccCCcCCccCccccCCCCCCcEEEcccCcCCccCccccccCCCCCEEEccCCccccCC
Q 003158 2 WNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQI 81 (843)
Q Consensus 2 ~N~i~~~~p~~i~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 81 (843)
+|++++ +|.. +++|++|++++|++++ ++.. .++|++|++++|++++ +| .|.++++|++|++++|++++ +
T Consensus 100 ~n~l~~-lp~~---~~~L~~L~l~~n~l~~-l~~~---~~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~N~l~~-l 168 (454)
T 1jl5_A 100 CNSLTE-LPEL---PQSLKSLLVDNNNLKA-LSDL---PPLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNNSLKK-L 168 (454)
T ss_dssp SSCCSS-CCCC---CTTCCEEECCSSCCSC-CCSC---CTTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSC-C
T ss_pred CCcCCc-cccc---cCCCcEEECCCCccCc-ccCC---CCCCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCCCcCcc-c
Confidence 455554 4432 2455666666665553 2211 1567777777777774 55 47777777777777777764 4
Q ss_pred CcccCCCCCCceeeccCCCCCCCCCcccCCCCCCcEEEcCCCCCCCCCCCccccCCCCCcEEEcCCCCCCCCCCCCCCCC
Q 003158 82 PPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMPDLSRIP 161 (843)
Q Consensus 82 ~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~ 161 (843)
|..+ ++|++|++++|++++ +| .+.++++|++|++++|++++ +|... ++|+.|++++|.++.++ .+..++
T Consensus 169 p~~~---~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~--l~~~~---~~L~~L~l~~n~l~~lp-~~~~l~ 237 (454)
T 1jl5_A 169 PDLP---PSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYADNNSLKK--LPDLP---LSLESIVAGNNILEELP-ELQNLP 237 (454)
T ss_dssp CCCC---TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSS--CCCCC---TTCCEEECCSSCCSSCC-CCTTCT
T ss_pred CCCc---ccccEEECcCCcCCc-Cc-cccCCCCCCEEECCCCcCCc--CCCCc---CcccEEECcCCcCCccc-ccCCCC
Confidence 4332 467777777777764 34 46667777777777777653 33322 36666666666666444 466666
Q ss_pred CCCEEEcccCcCCCCCCCCCCCcCcCEEEccCCcCCCCCCcccCCCCCCcEEeCcCccCCC--CCCchhhccc----c--
Q 003158 162 NLGYLDLSSNQLNGSIPPGRLSLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSG--SIPSSIWQSR----T-- 233 (843)
Q Consensus 162 ~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~--~~p~~~~~l~----~-- 233 (843)
+|+.|++++|+++ .+|.. ..+|+.|++++|.+++ +|.. +++|++|++++|++++ .+|..+..+. .
T Consensus 238 ~L~~L~l~~N~l~-~l~~~--~~~L~~L~l~~N~l~~-l~~~---~~~L~~L~ls~N~l~~l~~~~~~L~~L~l~~N~l~ 310 (454)
T 1jl5_A 238 FLTTIYADNNLLK-TLPDL--PPSLEALNVRDNYLTD-LPEL---PQSLTFLDVSENIFSGLSELPPNLYYLNASSNEIR 310 (454)
T ss_dssp TCCEEECCSSCCS-SCCSC--CTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSEESCCCTTCCEEECCSSCCS
T ss_pred CCCEEECCCCcCC-ccccc--ccccCEEECCCCcccc-cCcc---cCcCCEEECcCCccCcccCcCCcCCEEECcCCcCC
Confidence 6666666666666 34432 1356666666666654 3322 2455555555555554 2332221110 0
Q ss_pred -C-CC-CcceeEEcCCCCCCCCCCCCcCCCCcEEEeccCccc
Q 003158 234 -L-NA-TETFILDFQNNNLTNISGSFNIPPNVTVRLRGNPFC 272 (843)
Q Consensus 234 -l-~~-~~L~~L~l~~N~l~~~~~~~~~~~l~~l~l~~Np~~ 272 (843)
+ .. ++|+.|++++|++++++.. ++.++.|++++|.+.
T Consensus 311 ~i~~~~~~L~~L~Ls~N~l~~lp~~--~~~L~~L~L~~N~l~ 350 (454)
T 1jl5_A 311 SLCDLPPSLEELNVSNNKLIELPAL--PPRLERLIASFNHLA 350 (454)
T ss_dssp EECCCCTTCCEEECCSSCCSCCCCC--CTTCCEEECCSSCCS
T ss_pred cccCCcCcCCEEECCCCcccccccc--CCcCCEEECCCCccc
Confidence 0 11 3566777777777766543 466777777777654
No 321
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.91 E-value=8.6e-23 Score=238.69 Aligned_cols=232 Identities=27% Similarity=0.382 Sum_probs=153.7
Q ss_pred CccccccCCccccCCCCCCEEEccCCcCCccCccccCCCCCCcEEEcccCcCCccCccccccCCCCCEEEccCCccccCC
Q 003158 2 WNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQI 81 (843)
Q Consensus 2 ~N~i~~~~p~~i~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 81 (843)
+|+|+ .+|..+. ++|+.|+|++|+|+ .+|. .+++|++|+|++|+|+ .+|. .+++|+.|+|++|.|++ +
T Consensus 49 ~n~L~-~lp~~l~--~~L~~L~L~~N~l~-~lp~---~l~~L~~L~Ls~N~l~-~lp~---~l~~L~~L~Ls~N~l~~-l 116 (622)
T 3g06_A 49 ESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPA---LPPELRTLEVSGNQLT-SLPV---LPPGLLELSIFSNPLTH-L 116 (622)
T ss_dssp SSCCS-CCCSCCC--TTCSEEEECSCCCS-CCCC---CCTTCCEEEECSCCCS-CCCC---CCTTCCEEEECSCCCCC-C
T ss_pred CCCcC-ccChhhC--CCCcEEEecCCCCC-CCCC---cCCCCCEEEcCCCcCC-cCCC---CCCCCCEEECcCCcCCC-C
Confidence 56777 7777775 78999999999888 4555 5788899999999888 4554 67888888888888884 3
Q ss_pred CcccCCCCCCceeeccCCCCCCCCCcccCCCCCCcEEEcCCCCCCCCCCCcccc-----------------CCCCCcEEE
Q 003158 82 PPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYS-----------------NMSKLLKLS 144 (843)
Q Consensus 82 ~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~-----------------~l~~L~~L~ 144 (843)
|. .+++|+.|+|++|+|+. +|.. +++|++|+|++|++++ +|..+. .+++|+.|+
T Consensus 117 ~~---~l~~L~~L~L~~N~l~~-lp~~---l~~L~~L~Ls~N~l~~--l~~~~~~L~~L~L~~N~l~~l~~~~~~L~~L~ 187 (622)
T 3g06_A 117 PA---LPSGLCKLWIFGNQLTS-LPVL---PPGLQELSVSDNQLAS--LPALPSELCKLWAYNNQLTSLPMLPSGLQELS 187 (622)
T ss_dssp CC---CCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSC--CCCCCTTCCEEECCSSCCSCCCCCCTTCCEEE
T ss_pred CC---CCCCcCEEECCCCCCCc-CCCC---CCCCCEEECcCCcCCC--cCCccCCCCEEECCCCCCCCCcccCCCCcEEE
Confidence 43 55778888888888774 4433 3677777887777764 333221 124455555
Q ss_pred cCCCCCCCCCCCCCCCCCCCEEEcccCcCCCCCCCCCCCcCcCEEEccCCcCCCCCCcccCCCCCCcEEeCcCccCCCCC
Q 003158 145 LRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLSLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSI 224 (843)
Q Consensus 145 L~~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 224 (843)
|++|++++++.. +++|+.|++++|.++ .+|.. ..+|+.|+|++|.|++ +| ..+++|+.|+|++|+|+ .+
T Consensus 188 Ls~N~l~~l~~~---~~~L~~L~L~~N~l~-~l~~~--~~~L~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~L~-~l 256 (622)
T 3g06_A 188 VSDNQLASLPTL---PSELYKLWAYNNRLT-SLPAL--PSGLKELIVSGNRLTS-LP---VLPSELKELMVSGNRLT-SL 256 (622)
T ss_dssp CCSSCCSCCCCC---CTTCCEEECCSSCCS-SCCCC--CTTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCS-CC
T ss_pred CCCCCCCCCCCc---cchhhEEECcCCccc-ccCCC--CCCCCEEEccCCccCc-CC---CCCCcCcEEECCCCCCC-cC
Confidence 555555544332 245555555555555 34432 2367777777777764 33 44566777777777776 34
Q ss_pred CchhhccccCCCCcceeEEcCCCCCCCCCCCC-cCCCCcEEEeccCcccc
Q 003158 225 PSSIWQSRTLNATETFILDFQNNNLTNISGSF-NIPPNVTVRLRGNPFCL 273 (843)
Q Consensus 225 p~~~~~l~~l~~~~L~~L~l~~N~l~~~~~~~-~~~~l~~l~l~~Np~~c 273 (843)
|. ..++|+.|+|++|+|+.+|..+ .++++..|+|++|++..
T Consensus 257 p~--------~~~~L~~L~Ls~N~L~~lp~~l~~l~~L~~L~L~~N~l~~ 298 (622)
T 3g06_A 257 PM--------LPSGLLSLSVYRNQLTRLPESLIHLSSETTVNLEGNPLSE 298 (622)
T ss_dssp CC--------CCTTCCEEECCSSCCCSCCGGGGGSCTTCEEECCSCCCCH
T ss_pred Cc--------ccccCcEEeCCCCCCCcCCHHHhhccccCEEEecCCCCCC
Confidence 44 1245667888888888777655 67778888888887753
No 322
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.90 E-value=7.3e-23 Score=218.04 Aligned_cols=202 Identities=24% Similarity=0.343 Sum_probs=180.5
Q ss_pred cccCCCCCCEEEccCCcCCccCccccCCCCCCcEEEcccCcCCccCccccccCCCCCEEEccCCccccCCCcccCCCCCC
Q 003158 12 EIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSL 91 (843)
Q Consensus 12 ~i~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L 91 (843)
.+.++++|+.|++++|+++ .+|..+. ++|++|+|++|.|++..+..|.++++|+.|+|++|.|++..+ ...+++|
T Consensus 5 ~~~~l~~l~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L 79 (290)
T 1p9a_G 5 EVSKVASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQV--DGTLPVL 79 (290)
T ss_dssp EEECSTTCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEEC--CSCCTTC
T ss_pred cccccCCccEEECCCCCCC-cCCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccC--CCCCCcC
Confidence 3678999999999999999 6666654 789999999999998888999999999999999999996533 3789999
Q ss_pred ceeeccCCCCCCCCCcccCCCCCCcEEEcCCCCCCCCCCCccccCCCCCcEEEcCCCCCCCCCCC-CCCCCCCCEEEccc
Q 003158 92 VHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMPD-LSRIPNLGYLDLSS 170 (843)
Q Consensus 92 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~ 170 (843)
++|+|++|+|+ .+|..+..+++|++|+|++|++++ ..+..|.++++|+.|+|++|+++++++. |..+++|+.|+|++
T Consensus 80 ~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~-l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~ 157 (290)
T 1p9a_G 80 GTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTS-LPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLAN 157 (290)
T ss_dssp CEEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCC-CCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTT
T ss_pred CEEECCCCcCC-cCchhhccCCCCCEEECCCCcCcc-cCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCC
Confidence 99999999999 678889999999999999999985 4457899999999999999999998885 78999999999999
Q ss_pred CcCCCCCCCCCCC--cCcCEEEccCCcCCCCCCcccCCCCCCcEEeCcCccCCC
Q 003158 171 NQLNGSIPPGRLS--LNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSG 222 (843)
Q Consensus 171 N~l~~~~p~~~~~--~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 222 (843)
|+|+ .+|...+. .+|+.|+|++|+|+ .+|..+..+++|+.|+|++|.+..
T Consensus 158 N~l~-~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~C 209 (290)
T 1p9a_G 158 NNLT-ELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWLC 209 (290)
T ss_dssp SCCS-CCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBCC
T ss_pred CcCC-ccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCccC
Confidence 9999 66665433 48999999999999 778888889999999999999974
No 323
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.90 E-value=2.9e-23 Score=219.20 Aligned_cols=205 Identities=19% Similarity=0.266 Sum_probs=116.1
Q ss_pred cCCCCCCEEEccCCcCCccCccccCCCCCCcEEEcccCcCCccCccccccCCCCCEEEccCCccccCCCcccCCCCCCce
Q 003158 14 GNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVH 93 (843)
Q Consensus 14 ~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~ 93 (843)
..+++|+.|++++|.++. + +.++.+++|++|+|++|.+++. ..+..+++|++|+|++|.+++..+..|.++++|++
T Consensus 38 ~~l~~L~~L~l~~~~i~~-~-~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 113 (272)
T 3rfs_A 38 NELNSIDQIIANNSDIKS-V-QGIQYLPNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKE 113 (272)
T ss_dssp HHHTTCCEEECTTSCCCC-C-TTGGGCTTCCEEECTTSCCCCC--GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCE
T ss_pred ccccceeeeeeCCCCccc-c-cccccCCCCcEEECCCCCCCCc--hhhcCCCCCCEEECCCCccCccChhHhcCCcCCCE
Confidence 345566666666666552 2 2355566666666666666532 24556666666666666666555555566666666
Q ss_pred eeccCCCCCCCCCcccCCCCCCcEEEcCCCCCCCCCCCccccCCCCCcEEEcCCCCCCCCCCC-CCCCCCCCEEEcccCc
Q 003158 94 MLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMPD-LSRIPNLGYLDLSSNQ 172 (843)
Q Consensus 94 L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~ 172 (843)
|+|++|++++..+..|..+++|++|+|++|++++ ..+..+..+++|+.|+|++|+++++++. +..+++|+.|+|++|+
T Consensus 114 L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~ 192 (272)
T 3rfs_A 114 LVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQS-LPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQ 192 (272)
T ss_dssp EECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCC-CCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EECCCCcCCccCHHHhccCCCCCEEECCCCccCc-cCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCc
Confidence 6666666665555555666666666666666653 2334455666666666666666655553 4556666666666666
Q ss_pred CCCCCCCCCC-CcCcCEEEccCCcCCCCCCcccCCCCCCcEEeCcCccCCCCCCchhhc
Q 003158 173 LNGSIPPGRL-SLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQ 230 (843)
Q Consensus 173 l~~~~p~~~~-~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 230 (843)
+++..+..+. ..+|+.|+|++|.+.+. +++|+.|+++.|.++|.+|..++.
T Consensus 193 l~~~~~~~~~~l~~L~~L~l~~N~~~~~-------~~~l~~l~~~~n~~~g~ip~~~~~ 244 (272)
T 3rfs_A 193 LKSVPDGVFDRLTSLQYIWLHDNPWDCT-------CPGIRYLSEWINKHSGVVRNSAGS 244 (272)
T ss_dssp CSCCCTTTTTTCTTCCEEECCSSCBCCC-------TTTTHHHHHHHHHTGGGBBCTTSC
T ss_pred CCccCHHHHhCCcCCCEEEccCCCcccc-------CcHHHHHHHHHHhCCCcccCcccc
Confidence 6643333222 23566666666655432 334555566666666666555543
No 324
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.90 E-value=2.8e-22 Score=211.40 Aligned_cols=204 Identities=23% Similarity=0.311 Sum_probs=180.7
Q ss_pred CCCCEEEccCCcCCccCccccCCCCCCcEEEcccCcCCccCccccccCCCCCEEEccCCccccCCCcccCCCCCCceeec
Q 003158 17 KSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLL 96 (843)
Q Consensus 17 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L 96 (843)
.+++.+++++++++ .+|..+. ++|++|+|++|++++..+..|.++++|++|+|++|.|+...+..|.++++|++|+|
T Consensus 16 ~~~~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l 92 (270)
T 2o6q_A 16 NNKNSVDCSSKKLT-AIPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWV 92 (270)
T ss_dssp TTTTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEEC
T ss_pred CCCCEEEccCCCCC-ccCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEEC
Confidence 46889999999999 5776665 68999999999999877788999999999999999999777777899999999999
Q ss_pred cCCCCCCCCCcccCCCCCCcEEEcCCCCCCCCCCCccccCCCCCcEEEcCCCCCCCCCCC-CCCCCCCCEEEcccCcCCC
Q 003158 97 DNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMPD-LSRIPNLGYLDLSSNQLNG 175 (843)
Q Consensus 97 ~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~ 175 (843)
++|++++..+..|..+++|++|+|++|++++ ..+..|..+++|+.|+|++|.++++++. +..+++|+.|+|++|.+++
T Consensus 93 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~-~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~ 171 (270)
T 2o6q_A 93 TDNKLQALPIGVFDQLVNLAELRLDRNQLKS-LPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKR 171 (270)
T ss_dssp CSSCCCCCCTTTTTTCSSCCEEECCSSCCCC-CCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSC
T ss_pred CCCcCCcCCHhHcccccCCCEEECCCCccCe-eCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcE
Confidence 9999998878889999999999999999986 4567789999999999999999998885 8999999999999999995
Q ss_pred CCCCCCC-CcCcCEEEccCCcCCCCCCcccCCCCCCcEEeCcCccCCCCC
Q 003158 176 SIPPGRL-SLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSI 224 (843)
Q Consensus 176 ~~p~~~~-~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 224 (843)
..+..+. ..+|+.|+|++|.|++..+..|..+++|+.|+|++|.+...-
T Consensus 172 ~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c 221 (270)
T 2o6q_A 172 VPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDCTC 221 (270)
T ss_dssp CCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCSS
T ss_pred eChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCeeCCC
Confidence 4443333 358999999999999888888999999999999999997543
No 325
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.89 E-value=3.7e-23 Score=222.82 Aligned_cols=225 Identities=18% Similarity=0.223 Sum_probs=171.0
Q ss_pred CCCCEEEccCCcCCccCcc---ccCCCCCCcEEEcccCcCCccCcccc--ccCCCCCEEEccCCccccCCC----cccCC
Q 003158 17 KSLELLLLNGNELTGSLPE---ELGYLPKLDRIQIDQNYISGSLPKSF--ANLNKTRHFHMNNNSISGQIP----PELSR 87 (843)
Q Consensus 17 ~~L~~L~L~~n~l~~~~p~---~~~~l~~L~~L~L~~N~l~~~~~~~~--~~l~~L~~L~Ls~N~l~~~~~----~~l~~ 87 (843)
..++.|.+.++.++...-. .+..+++|++|+|++|.+++..|..+ ..+++|++|+|++|.+++..+ ..+..
T Consensus 64 ~~l~~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~ 143 (310)
T 4glp_A 64 LRVRRLTVGAAQVPAQLLVGALRVLAYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWL 143 (310)
T ss_dssp CCCCEEEECSCCCBHHHHHHHHHHHHHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTB
T ss_pred cceeEEEEeCCcCCHHHHHHHHHhcccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhh
Confidence 3478888888877622111 12235679999999999988888887 888999999999999886554 34567
Q ss_pred CCCCceeeccCCCCCCCCCcccCCCCCCcEEEcCCCCCCC---CCCCccccCCCCCcEEEcCCCCCCCCCCC----CCCC
Q 003158 88 LPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEG---TTIPASYSNMSKLLKLSLRNCSLQGPMPD----LSRI 160 (843)
Q Consensus 88 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~---~~~~~~~~~l~~L~~L~L~~N~l~~~~~~----~~~l 160 (843)
+++|++|+|++|++++..+..|..+++|++|+|++|++.+ ...+..+..+++|++|+|++|+++.++.. +..+
T Consensus 144 ~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~~l 223 (310)
T 4glp_A 144 KPGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMETPTGVCAALAAAG 223 (310)
T ss_dssp CSCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCCHHHHHHHHHHHT
T ss_pred ccCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCchHHHHHHHHhcC
Confidence 8899999999999988888888899999999999998753 11133457888999999999998765442 4677
Q ss_pred CCCCEEEcccCcCCCCCCCCCCC----cCcCEEEccCCcCCCCCCcccCCCCCCcEEeCcCccCCCCCCchhhccccCCC
Q 003158 161 PNLGYLDLSSNQLNGSIPPGRLS----LNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNA 236 (843)
Q Consensus 161 ~~L~~L~Ls~N~l~~~~p~~~~~----~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~l~~ 236 (843)
++|+.|+|++|++++.+|..... .+|++|+|++|+|+ .+|..+. ++|++|+|++|+|++. |. +.. .
T Consensus 224 ~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~~-~~-~~~-----l 293 (310)
T 4glp_A 224 VQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNRA-PQ-PDE-----L 293 (310)
T ss_dssp CCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCSC-CC-TTS-----C
T ss_pred CCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCCC-ch-hhh-----C
Confidence 89999999999998776654433 38999999999998 5676664 7899999999999853 33 222 3
Q ss_pred CcceeEEcCCCCCCC
Q 003158 237 TETFILDFQNNNLTN 251 (843)
Q Consensus 237 ~~L~~L~l~~N~l~~ 251 (843)
++|+.|+|++|+|+.
T Consensus 294 ~~L~~L~L~~N~l~~ 308 (310)
T 4glp_A 294 PEVDNLTLDGNPFLV 308 (310)
T ss_dssp CCCSCEECSSTTTSC
T ss_pred CCccEEECcCCCCCC
Confidence 566789999998875
No 326
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.89 E-value=1.1e-22 Score=218.69 Aligned_cols=195 Identities=22% Similarity=0.369 Sum_probs=161.2
Q ss_pred ccCCCCCCEEEccCCcCCccCccccCCCCCCcEEEcccCcCCccCccccccCCCCCEEEccCCccccCCCcccCCCCCCc
Q 003158 13 IGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLV 92 (843)
Q Consensus 13 i~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~ 92 (843)
+.++++|+.|++++|+++. ++ .+..+++|++|+|++|.+++..+ +..+++|+.|+|++|.+++. ..+..+++|+
T Consensus 37 ~~~l~~L~~L~l~~~~i~~-l~-~~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l~~~--~~~~~l~~L~ 110 (308)
T 1h6u_A 37 QADLDGITTLSAFGTGVTT-IE-GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKNV--SAIAGLQSIK 110 (308)
T ss_dssp HHHHHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSCC--GGGTTCTTCC
T ss_pred HHHcCCcCEEEeeCCCccC-ch-hhhccCCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcCCCc--hhhcCCCCCC
Confidence 4567889999999999984 44 68889999999999999985544 88999999999999999854 3688899999
Q ss_pred eeeccCCCCCCCCCcccCCCCCCcEEEcCCCCCCCCCCCccccCCCCCcEEEcCCCCCCCCCCCCCCCCCCCEEEcccCc
Q 003158 93 HMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQ 172 (843)
Q Consensus 93 ~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~Ls~N~ 172 (843)
+|+|++|++++. + .+..+++|++|+|++|++++ ++. +..+++|+.|+|++|+++++++ +..+++|+.|+|++|.
T Consensus 111 ~L~l~~n~l~~~-~-~l~~l~~L~~L~l~~n~l~~--~~~-l~~l~~L~~L~l~~n~l~~~~~-l~~l~~L~~L~l~~n~ 184 (308)
T 1h6u_A 111 TLDLTSTQITDV-T-PLAGLSNLQVLYLDLNQITN--ISP-LAGLTNLQYLSIGNAQVSDLTP-LANLSKLTTLKADDNK 184 (308)
T ss_dssp EEECTTSCCCCC-G-GGTTCTTCCEEECCSSCCCC--CGG-GGGCTTCCEEECCSSCCCCCGG-GTTCTTCCEEECCSSC
T ss_pred EEECCCCCCCCc-h-hhcCCCCCCEEECCCCccCc--Ccc-ccCCCCccEEEccCCcCCCChh-hcCCCCCCEEECCCCc
Confidence 999999999864 3 48889999999999999975 333 8889999999999999988766 8889999999999999
Q ss_pred CCCCCCCCCCCcCcCEEEccCCcCCCCCCcccCCCCCCcEEeCcCccCCC
Q 003158 173 LNGSIPPGRLSLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSG 222 (843)
Q Consensus 173 l~~~~p~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 222 (843)
+++ ++......+|+.|+|++|.+++.. .+..+++|+.|+|++|++++
T Consensus 185 l~~-~~~l~~l~~L~~L~L~~N~l~~~~--~l~~l~~L~~L~l~~N~i~~ 231 (308)
T 1h6u_A 185 ISD-ISPLASLPNLIEVHLKNNQISDVS--PLANTSNLFIVTLTNQTITN 231 (308)
T ss_dssp CCC-CGGGGGCTTCCEEECTTSCCCBCG--GGTTCTTCCEEEEEEEEEEC
T ss_pred cCc-ChhhcCCCCCCEEEccCCccCccc--cccCCCCCCEEEccCCeeec
Confidence 984 444333458999999999998655 38889999999999999874
No 327
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.89 E-value=1.4e-22 Score=213.98 Aligned_cols=197 Identities=20% Similarity=0.285 Sum_probs=176.4
Q ss_pred CccccccCCccccCCCCCCEEEccCCcCCccCccccCCCCCCcEEEcccCcCCccCccccccCCCCCEEEccCCccccCC
Q 003158 2 WNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQI 81 (843)
Q Consensus 2 ~N~i~~~~p~~i~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 81 (843)
+|+++ .+ ..+..+++|++|+|++|.+++. +.++.+++|++|+|++|.+++..+..|.++++|++|+|++|++++..
T Consensus 50 ~~~i~-~~-~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~ 125 (272)
T 3rfs_A 50 NSDIK-SV-QGIQYLPNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLP 125 (272)
T ss_dssp TSCCC-CC-TTGGGCTTCCEEECTTSCCCCC--GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCC
T ss_pred CCCcc-cc-cccccCCCCcEEECCCCCCCCc--hhhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccC
Confidence 35555 33 3688999999999999999963 58999999999999999999888888999999999999999999888
Q ss_pred CcccCCCCCCceeeccCCCCCCCCCcccCCCCCCcEEEcCCCCCCCCCCCccccCCCCCcEEEcCCCCCCCCCCC-CCCC
Q 003158 82 PPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMPD-LSRI 160 (843)
Q Consensus 82 ~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l 160 (843)
+..|..+++|++|+|++|++++..+..+..+++|++|+|++|++++ ..+..+..+++|+.|+|++|+++++++. +..+
T Consensus 126 ~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~-~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 204 (272)
T 3rfs_A 126 DGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQS-LPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRL 204 (272)
T ss_dssp TTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCC-CCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTC
T ss_pred HHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCc-cCHHHhcCCccCCEEECCCCcCCccCHHHHhCC
Confidence 8889999999999999999998888889999999999999999986 4566789999999999999999998886 8999
Q ss_pred CCCCEEEcccCcCCCCCCCCCCCcCcCEEEccCCcCCCCCCcccCCCCC
Q 003158 161 PNLGYLDLSSNQLNGSIPPGRLSLNITTIKLSNNKLTGTIPSNFSGLPR 209 (843)
Q Consensus 161 ~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~ 209 (843)
++|+.|+|++|.+.+..| +|+.|+++.|.++|.+|..++.++.
T Consensus 205 ~~L~~L~l~~N~~~~~~~------~l~~l~~~~n~~~g~ip~~~~~~~~ 247 (272)
T 3rfs_A 205 TSLQYIWLHDNPWDCTCP------GIRYLSEWINKHSGVVRNSAGSVAP 247 (272)
T ss_dssp TTCCEEECCSSCBCCCTT------TTHHHHHHHHHTGGGBBCTTSCBCG
T ss_pred cCCCEEEccCCCccccCc------HHHHHHHHHHhCCCcccCcccccCC
Confidence 999999999999986655 6888999999999999998887544
No 328
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.88 E-value=8.3e-22 Score=205.41 Aligned_cols=129 Identities=21% Similarity=0.306 Sum_probs=72.3
Q ss_pred CCcEEEcccCcCCccCccccccCCCCCEEEccCCccccCCCcccCCCCCCceeeccCCCCCCCCCcccCCCCCCcEEEcC
Q 003158 42 KLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLD 121 (843)
Q Consensus 42 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls 121 (843)
..++++++++.++ .+|..+. ++|+.|+|++|.+++..+..|.++++|++|+|++|+|++..+..|..+++|++|+|+
T Consensus 15 ~~~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 91 (251)
T 3m19_A 15 GKKEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLA 91 (251)
T ss_dssp GGTEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECT
T ss_pred CCeEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECC
Confidence 4556666666666 4444333 456666666666665555556666666666666666665555555566666666666
Q ss_pred CCCCCCCCCCccccCCCCCcEEEcCCCCCCCCCCC-CCCCCCCCEEEcccCcCC
Q 003158 122 NNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMPD-LSRIPNLGYLDLSSNQLN 174 (843)
Q Consensus 122 ~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~ 174 (843)
+|++++ ..+..|..+++|+.|+|++|+++++++. +..+++|+.|+|++|+|+
T Consensus 92 ~n~l~~-~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 144 (251)
T 3m19_A 92 NNQLAS-LPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQ 144 (251)
T ss_dssp TSCCCC-CCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC
T ss_pred CCcccc-cChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCC
Confidence 666553 2334455555555555555555555543 445555555555555554
No 329
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.88 E-value=5.3e-23 Score=217.82 Aligned_cols=154 Identities=12% Similarity=0.055 Sum_probs=123.9
Q ss_pred HHHHHHHHcCCCCCCcccccCCeeEEEEEeCCCcEEEEEEeccCCh------------------hhHHHHHHHHHHHHhc
Q 003158 503 YGEMALATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSL------------------QGEKEFLTEIQFLSRL 564 (843)
Q Consensus 503 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~------------------~~~~~~~~E~~~l~~l 564 (843)
...+......|.+.+.||+|+||.||+|...+|+.||+|++..... .....+.+|+++++++
T Consensus 82 l~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l 161 (282)
T 1zar_A 82 LHRLVRSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKL 161 (282)
T ss_dssp HHHHHHTTSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHhCCeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhc
Confidence 3344444566777799999999999999997799999999864321 1345689999999999
Q ss_pred cCCcccceeeeeecCCcEEEEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEE
Q 003158 565 HHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNIL 644 (843)
Q Consensus 565 ~h~nIv~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NIL 644 (843)
+ | +++.+++.. +..++||||+++|+|.+ +.. .....++.|+++||.|||+.+ |+||||||+|||
T Consensus 162 ~--~-~~v~~~~~~-~~~~lvmE~~~g~~L~~-l~~--------~~~~~i~~qi~~~l~~lH~~g---iiHrDlkp~NIL 225 (282)
T 1zar_A 162 Q--G-LAVPKVYAW-EGNAVLMELIDAKELYR-VRV--------ENPDEVLDMILEEVAKFYHRG---IVHGDLSQYNVL 225 (282)
T ss_dssp T--T-SSSCCEEEE-ETTEEEEECCCCEEGGG-CCC--------SCHHHHHHHHHHHHHHHHHTT---EECSCCSTTSEE
T ss_pred c--C-CCcCeEEec-cceEEEEEecCCCcHHH-cch--------hhHHHHHHHHHHHHHHHHHCC---CEeCCCCHHHEE
Confidence 9 5 677776544 56699999999999988 421 234569999999999999999 999999999999
Q ss_pred EcCCCcEEEeeccccccCCCCCCCCcccceeeeeecccCCccCchhccc
Q 003158 645 LDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT 693 (843)
Q Consensus 645 l~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~ 693 (843)
++ ++.+||+|||+|+. +..|+|||++..
T Consensus 226 l~-~~~vkl~DFG~a~~--------------------~~~~~a~e~l~r 253 (282)
T 1zar_A 226 VS-EEGIWIIDFPQSVE--------------------VGEEGWREILER 253 (282)
T ss_dssp EE-TTEEEECCCTTCEE--------------------TTSTTHHHHHHH
T ss_pred EE-CCcEEEEECCCCeE--------------------CCCCCHHHHHHH
Confidence 99 99999999999863 345789998753
No 330
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.88 E-value=5.8e-23 Score=221.36 Aligned_cols=222 Identities=18% Similarity=0.242 Sum_probs=184.9
Q ss_pred CCCcEEEcccCcCCccCcc---ccccCCCCCEEEccCCccccCCCccc--CCCCCCceeeccCCCCCCCCC----cccCC
Q 003158 41 PKLDRIQIDQNYISGSLPK---SFANLNKTRHFHMNNNSISGQIPPEL--SRLPSLVHMLLDNNNLTGYLP----PELSE 111 (843)
Q Consensus 41 ~~L~~L~L~~N~l~~~~~~---~~~~l~~L~~L~Ls~N~l~~~~~~~l--~~l~~L~~L~L~~N~l~~~~~----~~~~~ 111 (843)
..++.|.+.++.++...-. .+..+++|++|+|++|.+++..|..+ ..+++|++|+|++|++++..+ ..+..
T Consensus 64 ~~l~~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~ 143 (310)
T 4glp_A 64 LRVRRLTVGAAQVPAQLLVGALRVLAYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWL 143 (310)
T ss_dssp CCCCEEEECSCCCBHHHHHHHHHHHHHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTB
T ss_pred cceeEEEEeCCcCCHHHHHHHHHhcccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhh
Confidence 4578899998887632111 12345779999999999999999888 899999999999999997655 34567
Q ss_pred CCCCcEEEcCCCCCCCCCCCccccCCCCCcEEEcCCCCCCC---CCC--CCCCCCCCCEEEcccCcCCCCCCCC---C--
Q 003158 112 LPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQG---PMP--DLSRIPNLGYLDLSSNQLNGSIPPG---R-- 181 (843)
Q Consensus 112 l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~---~~~--~~~~l~~L~~L~Ls~N~l~~~~p~~---~-- 181 (843)
+++|++|+|++|++.+ ..+..|..+++|++|+|++|++.+ ++. .+..+++|++|+|++|+++ .++.. .
T Consensus 144 ~~~L~~L~Ls~n~l~~-~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~ 221 (310)
T 4glp_A 144 KPGLKVLSIAQAHSPA-FSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGME-TPTGVCAALAA 221 (310)
T ss_dssp CSCCCEEEEECCSSCC-CCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCC-CHHHHHHHHHH
T ss_pred ccCCCEEEeeCCCcch-hhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCC-chHHHHHHHHh
Confidence 8999999999999986 567889999999999999999875 333 2578999999999999997 44432 1
Q ss_pred CCcCcCEEEccCCcCCCCCCcccCCC---CCCcEEeCcCccCCCCCCchhhccccCCCCcceeEEcCCCCCCCCCCCCcC
Q 003158 182 LSLNITTIKLSNNKLTGTIPSNFSGL---PRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGSFNI 258 (843)
Q Consensus 182 ~~~~L~~L~Ls~N~l~~~~p~~~~~l---~~L~~L~L~~N~l~~~~p~~~~~l~~l~~~~L~~L~l~~N~l~~~~~~~~~ 258 (843)
...+|++|+|++|.|++..|..+..+ ++|++|+|++|+|+ .+|..+. ++|+.|+|++|+|++++....+
T Consensus 222 ~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~-------~~L~~L~Ls~N~l~~~~~~~~l 293 (310)
T 4glp_A 222 AGVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP-------AKLRVLDLSSNRLNRAPQPDEL 293 (310)
T ss_dssp HTCCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC-------SCCSCEECCSCCCCSCCCTTSC
T ss_pred cCCCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc-------CCCCEEECCCCcCCCCchhhhC
Confidence 22489999999999999888888877 69999999999999 7787662 4788999999999999776689
Q ss_pred CCCcEEEeccCccc
Q 003158 259 PPNVTVRLRGNPFC 272 (843)
Q Consensus 259 ~~l~~l~l~~Np~~ 272 (843)
+.++.|++++|++.
T Consensus 294 ~~L~~L~L~~N~l~ 307 (310)
T 4glp_A 294 PEVDNLTLDGNPFL 307 (310)
T ss_dssp CCCSCEECSSTTTS
T ss_pred CCccEEECcCCCCC
Confidence 99999999999985
No 331
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.88 E-value=3.7e-22 Score=230.48 Aligned_cols=224 Identities=28% Similarity=0.351 Sum_probs=174.3
Q ss_pred CCCEEEccCCcCCccCccccCCCCCCcEEEcccCcCCccCccccccCCCCCEEEccCCccccCCCcccCCCCCCceeecc
Q 003158 18 SLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLD 97 (843)
Q Consensus 18 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~ 97 (843)
+|+.|+|++|+|++ +|..+. ++|++|+|++|+|+ .+| ..+++|+.|+|++|.|++ +|. +.+ +|+.|+|+
T Consensus 60 ~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls 128 (571)
T 3cvr_A 60 QFSELQLNRLNLSS-LPDNLP--PQITVLEITQNALI-SLP---ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDVD 128 (571)
T ss_dssp TCSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECC
T ss_pred CccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC-cch-hhc--CCCEEECC
Confidence 89999999999996 776653 88999999999999 667 457999999999999996 666 665 99999999
Q ss_pred CCCCCCCCCcccCCCCCCcEEEcCCCCCCCCCCCccccCCCCCcEEEcCCCCCCCCCCCCCCCCCCCEEEcccCcCCCCC
Q 003158 98 NNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSI 177 (843)
Q Consensus 98 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 177 (843)
+|+|++ +|. .+++|+.|+|++|+|++ +|. .+++|+.|+|++|+|++++. +. ++|+.|+|++|+|+ .+
T Consensus 129 ~N~l~~-lp~---~l~~L~~L~Ls~N~l~~--lp~---~l~~L~~L~Ls~N~L~~lp~-l~--~~L~~L~Ls~N~L~-~l 195 (571)
T 3cvr_A 129 NNQLTM-LPE---LPALLEYINADNNQLTM--LPE---LPTSLEVLSVRNNQLTFLPE-LP--ESLEALDVSTNLLE-SL 195 (571)
T ss_dssp SSCCSC-CCC---CCTTCCEEECCSSCCSC--CCC---CCTTCCEEECCSSCCSCCCC-CC--TTCCEEECCSSCCS-SC
T ss_pred CCcCCC-CCC---cCccccEEeCCCCccCc--CCC---cCCCcCEEECCCCCCCCcch-hh--CCCCEEECcCCCCC-ch
Confidence 999997 555 67999999999999975 565 67899999999999999777 65 89999999999999 77
Q ss_pred CCCCCCcCc-------CEEEccCCcCCCCCCcccCCCCCCcEEeCcCccCCCCCCchhhccccCCC--CcceeEEcCCCC
Q 003158 178 PPGRLSLNI-------TTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNA--TETFILDFQNNN 248 (843)
Q Consensus 178 p~~~~~~~L-------~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~l~~--~~L~~L~l~~N~ 248 (843)
|. +.. +| +.|+|++|.|+ .+|..+..+++|+.|+|++|+|++.+|..+..+..... .....+++++|+
T Consensus 196 p~-~~~-~L~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~~~~~~~~~~~~l~~~~ 272 (571)
T 3cvr_A 196 PA-VPV-RNHHSEETEIFFRCRENRIT-HIPENILSLDPTCTIILEDNPLSSRIRESLSQQTAQPDYHGPRIYFSMSDGQ 272 (571)
T ss_dssp CC-CC---------CCEEEECCSSCCC-CCCGGGGGSCTTEEEECCSSSCCHHHHHHHHHHHHSCC---CEEECCC----
T ss_pred hh-HHH-hhhcccccceEEecCCCcce-ecCHHHhcCCCCCEEEeeCCcCCCcCHHHHHHhhcCccccCCeeEEeecccc
Confidence 77 333 77 99999999999 57888888999999999999999999999888765321 011123444444
Q ss_pred CCCCCCCCcCCCCcEEEeccCcccccCCcccccCCC
Q 003158 249 LTNISGSFNIPPNVTVRLRGNPFCLNTNAEQFCGSH 284 (843)
Q Consensus 249 l~~~~~~~~~~~l~~l~l~~Np~~c~~~~~~~~~~~ 284 (843)
+.. ..|| .|+|...|+-.+.
T Consensus 273 ~~~---------------~~~p-~~~~~~~Wl~~~~ 292 (571)
T 3cvr_A 273 QNT---------------LHRP-LADAVTAWFPENK 292 (571)
T ss_dssp ---------------------C-CSHHHHTTCC---
T ss_pred ccc---------------cccc-chhhHHHHhhhhc
Confidence 332 2456 7899888774433
No 332
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.88 E-value=3.7e-22 Score=206.42 Aligned_cols=194 Identities=19% Similarity=0.232 Sum_probs=131.7
Q ss_pred CCcEEEcccCcCCccCccccccCCCCCEEEccCCc-cccCCCcccCCCCCCceeeccC-CCCCCCCCcccCCCCCCcEEE
Q 003158 42 KLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNS-ISGQIPPELSRLPSLVHMLLDN-NNLTGYLPPELSELPKLLILQ 119 (843)
Q Consensus 42 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~-l~~~~~~~l~~l~~L~~L~L~~-N~l~~~~~~~~~~l~~L~~L~ 119 (843)
+|++|+|++|++++..+..|.++++|+.|+|++|+ ++.+.+..|.++++|++|+|++ |+++...+..|.++++|++|+
T Consensus 32 ~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~ 111 (239)
T 2xwt_C 32 STQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLG 111 (239)
T ss_dssp TCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEE
T ss_pred cccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEe
Confidence 66677777777765555566667777777777775 6655555666677777777776 677655556666777777777
Q ss_pred cCCCCCCCCCCCccccCCCCCc---EEEcCCC-CCCCCCCC-CCCCCCCC-EEEcccCcCCCCCCCCCCC-cCcCEEEcc
Q 003158 120 LDNNNFEGTTIPASYSNMSKLL---KLSLRNC-SLQGPMPD-LSRIPNLG-YLDLSSNQLNGSIPPGRLS-LNITTIKLS 192 (843)
Q Consensus 120 Ls~N~l~~~~~~~~~~~l~~L~---~L~L~~N-~l~~~~~~-~~~l~~L~-~L~Ls~N~l~~~~p~~~~~-~~L~~L~Ls 192 (843)
|++|++++ +|. |..+++|+ .|++++| .++++++. |..+++|+ .|++++|+++ .+|...+. .+|+.|+|+
T Consensus 112 l~~n~l~~--lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~-~i~~~~~~~~~L~~L~L~ 187 (239)
T 2xwt_C 112 IFNTGLKM--FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFT-SVQGYAFNGTKLDAVYLN 187 (239)
T ss_dssp EEEECCCS--CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCC-EECTTTTTTCEEEEEECT
T ss_pred CCCCCCcc--ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCc-ccCHhhcCCCCCCEEEcC
Confidence 77777753 454 66666666 7777777 77776664 77777777 7777777777 55554333 367788888
Q ss_pred CCc-CCCCCCcccCCC-CCCcEEeCcCccCCCCCCchhhccccCCCCcceeEEcCCC
Q 003158 193 NNK-LTGTIPSNFSGL-PRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNN 247 (843)
Q Consensus 193 ~N~-l~~~~p~~~~~l-~~L~~L~L~~N~l~~~~p~~~~~l~~l~~~~L~~L~l~~N 247 (843)
+|. ++...+..|.++ ++|+.|+|++|+|++ +|.. ..++|+.|+++++
T Consensus 188 ~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~-l~~~-------~~~~L~~L~l~~~ 236 (239)
T 2xwt_C 188 KNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTA-LPSK-------GLEHLKELIARNT 236 (239)
T ss_dssp TCTTCCEECTTTTTTCSBCCSEEECTTCCCCC-CCCT-------TCTTCSEEECTTC
T ss_pred CCCCcccCCHHHhhccccCCcEEECCCCcccc-CChh-------HhccCceeeccCc
Confidence 884 776667778888 888888888888874 4433 1234556777765
No 333
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.88 E-value=1.5e-21 Score=203.41 Aligned_cols=182 Identities=21% Similarity=0.287 Sum_probs=157.1
Q ss_pred CCCCEEEccCCcCCccCccccCCCCCCcEEEcccCcCCccCccccccCCCCCEEEccCCccccCCCcccCCCCCCceeec
Q 003158 17 KSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLL 96 (843)
Q Consensus 17 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L 96 (843)
.+.+.++++++.++ .+|..+. ++|++|+|++|++++..+..|.++++|++|+|++|.|++..+..|..+++|++|+|
T Consensus 14 ~~~~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 90 (251)
T 3m19_A 14 EGKKEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGL 90 (251)
T ss_dssp GGGTEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCeEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEEC
Confidence 46789999999999 6776665 68999999999999888889999999999999999999888888999999999999
Q ss_pred cCCCCCCCCCcccCCCCCCcEEEcCCCCCCCCCCCccccCCCCCcEEEcCCCCCCCCCC-CCCCCCCCCEEEcccCcCCC
Q 003158 97 DNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMP-DLSRIPNLGYLDLSSNQLNG 175 (843)
Q Consensus 97 ~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~ 175 (843)
++|+|++..+..|..+++|++|+|++|++++ ..+..|..+++|+.|+|++|+|+++++ .+..+++|+.|+|++|++++
T Consensus 91 ~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~-~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 169 (251)
T 3m19_A 91 ANNQLASLPLGVFDHLTQLDKLYLGGNQLKS-LPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQS 169 (251)
T ss_dssp TTSCCCCCCTTTTTTCTTCCEEECCSSCCCC-CCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSC
T ss_pred CCCcccccChhHhcccCCCCEEEcCCCcCCC-cChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCc
Confidence 9999998888889999999999999999985 345568899999999999999999888 48888888888888888772
Q ss_pred CCCCCCCCcCcCEEEccCCcCCCCCCcccCCCCCCcEEeCcCccCCCCCC
Q 003158 176 SIPPGRLSLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIP 225 (843)
Q Consensus 176 ~~p~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p 225 (843)
..+..|..+++|+.|+|++|++.+..+
T Consensus 170 -----------------------~~~~~~~~l~~L~~L~l~~N~~~c~~~ 196 (251)
T 3m19_A 170 -----------------------VPHGAFDRLGKLQTITLFGNQFDCSRC 196 (251)
T ss_dssp -----------------------CCTTTTTTCTTCCEEECCSCCBCTTST
T ss_pred -----------------------cCHHHHhCCCCCCEEEeeCCceeCCcc
Confidence 333456777888888888888876533
No 334
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.87 E-value=4.3e-24 Score=235.44 Aligned_cols=251 Identities=16% Similarity=0.162 Sum_probs=188.5
Q ss_pred CccccccCCccccCCCCCCEEEccCCcCCccCc----cccCCCC-CCcEEEcccCcCCccCccccccC-----CCCCEEE
Q 003158 2 WNKISGSIPKEIGNIKSLELLLLNGNELTGSLP----EELGYLP-KLDRIQIDQNYISGSLPKSFANL-----NKTRHFH 71 (843)
Q Consensus 2 ~N~i~~~~p~~i~~l~~L~~L~L~~n~l~~~~p----~~~~~l~-~L~~L~L~~N~l~~~~~~~~~~l-----~~L~~L~ 71 (843)
+|+++|.+|..+...++|++|+|++|.+++..+ ..|.+++ +|++|+|++|.+++..+..+..+ ++|++|+
T Consensus 7 ~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~ 86 (362)
T 3goz_A 7 LHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANVTSLN 86 (362)
T ss_dssp CCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEE
T ss_pred cccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCccEEE
Confidence 688999998888777889999999999997777 7888888 89999999999998878777775 8999999
Q ss_pred ccCCccccCCCccc----CCC-CCCceeeccCCCCCCCCCccc----CC-CCCCcEEEcCCCCCCCC---CCCccccCCC
Q 003158 72 MNNNSISGQIPPEL----SRL-PSLVHMLLDNNNLTGYLPPEL----SE-LPKLLILQLDNNNFEGT---TIPASYSNMS 138 (843)
Q Consensus 72 Ls~N~l~~~~~~~l----~~l-~~L~~L~L~~N~l~~~~~~~~----~~-l~~L~~L~Ls~N~l~~~---~~~~~~~~l~ 138 (843)
|++|.+++..+..+ ..+ ++|++|+|++|+|++..+..+ .. .++|++|+|++|++.+. .++..+..++
T Consensus 87 Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~ 166 (362)
T 3goz_A 87 LSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQILAAIP 166 (362)
T ss_dssp CCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSC
T ss_pred CcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHHHhcCC
Confidence 99999987766644 344 899999999999987665544 33 36999999999999741 1233445555
Q ss_pred -CCcEEEcCCCCCCCCCCC-----CCCC-CCCCEEEcccCcCCCC----CCCCCCC--cCcCEEEccCCcCCCCCC----
Q 003158 139 -KLLKLSLRNCSLQGPMPD-----LSRI-PNLGYLDLSSNQLNGS----IPPGRLS--LNITTIKLSNNKLTGTIP---- 201 (843)
Q Consensus 139 -~L~~L~L~~N~l~~~~~~-----~~~l-~~L~~L~Ls~N~l~~~----~p~~~~~--~~L~~L~Ls~N~l~~~~p---- 201 (843)
+|+.|+|++|++++..+. +..+ ++|+.|+|++|.|++. ++..... .+|+.|+|++|.|+...+
T Consensus 167 ~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~ 246 (362)
T 3goz_A 167 ANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHGPSLENLK 246 (362)
T ss_dssp TTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHHSCTTCCEEECCSSCCCCCCHHHHH
T ss_pred ccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhcCCCCceEEECcCCCCCcHHHHHHH
Confidence 899999999999876652 4455 5899999999998842 2222222 379999999999987655
Q ss_pred cccCCCCCCcEEeCcCccCCCCCCchhhcccc--CCCCcceeEEcCCCCCCCC
Q 003158 202 SNFSGLPRLQRLFIANNSLSGSIPSSIWQSRT--LNATETFILDFQNNNLTNI 252 (843)
Q Consensus 202 ~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~--l~~~~L~~L~l~~N~l~~~ 252 (843)
..+..+++|+.|+|++|.+.+..+..+..+.. -..++|+.||+++|+|...
T Consensus 247 ~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~~~ 299 (362)
T 3goz_A 247 LLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHPS 299 (362)
T ss_dssp HTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCCGG
T ss_pred HHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCCCc
Confidence 34567888999999999877555544433221 1344577777777776653
No 335
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.87 E-value=4.2e-22 Score=206.04 Aligned_cols=201 Identities=22% Similarity=0.266 Sum_probs=143.6
Q ss_pred cCCccccCCCCCCEEEccCCcCCccCccccCCCCCCcEEEcccCc-CCccCccccccCCCCCEEEccC-CccccCCCccc
Q 003158 8 SIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNY-ISGSLPKSFANLNKTRHFHMNN-NSISGQIPPEL 85 (843)
Q Consensus 8 ~~p~~i~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~-l~~~~~~~~~~l~~L~~L~Ls~-N~l~~~~~~~l 85 (843)
.+|. +. .+|++|+|++|+++++.+..|+++++|++|+|++|+ ++...+..|.++++|++|+|++ |.|+...+..|
T Consensus 25 ~ip~-~~--~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f 101 (239)
T 2xwt_C 25 RIPS-LP--PSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDAL 101 (239)
T ss_dssp SCCC-CC--TTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSE
T ss_pred ccCC-CC--CcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHh
Confidence 4555 43 378888888888887666678888888888888886 7766666778888888888887 78876666777
Q ss_pred CCCCCCceeeccCCCCCCCCCcccCCCCCCc---EEEcCCC-CCCCCCCCccccCCCCCc-EEEcCCCCCCCCCCCCCCC
Q 003158 86 SRLPSLVHMLLDNNNLTGYLPPELSELPKLL---ILQLDNN-NFEGTTIPASYSNMSKLL-KLSLRNCSLQGPMPDLSRI 160 (843)
Q Consensus 86 ~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~---~L~Ls~N-~l~~~~~~~~~~~l~~L~-~L~L~~N~l~~~~~~~~~l 160 (843)
.++++|++|+|++|++++ +|. |..+++|+ +|+|++| ++++ ..+..|.++++|+ .|+|++|+++.+++.....
T Consensus 102 ~~l~~L~~L~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~-i~~~~~~~l~~L~~~L~l~~n~l~~i~~~~~~~ 178 (239)
T 2xwt_C 102 KELPLLKFLGIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTS-IPVNAFQGLCNETLTLKLYNNGFTSVQGYAFNG 178 (239)
T ss_dssp ECCTTCCEEEEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCE-ECTTTTTTTBSSEEEEECCSCCCCEECTTTTTT
T ss_pred CCCCCCCEEeCCCCCCcc-ccc-cccccccccccEEECCCCcchhh-cCcccccchhcceeEEEcCCCCCcccCHhhcCC
Confidence 788888888888888875 454 77777777 8888888 7764 2344577788888 8888888887766653333
Q ss_pred CCCCEEEcccCc-CCCCCCCC-CC-C-cCcCEEEccCCcCCCCCCcccCCCCCCcEEeCcCc
Q 003158 161 PNLGYLDLSSNQ-LNGSIPPG-RL-S-LNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANN 218 (843)
Q Consensus 161 ~~L~~L~Ls~N~-l~~~~p~~-~~-~-~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 218 (843)
++|+.|+|++|+ ++ .++.. +. . .+|+.|+|++|.|++..+. .+++|+.|+++++
T Consensus 179 ~~L~~L~L~~n~~l~-~i~~~~~~~l~~~L~~L~l~~N~l~~l~~~---~~~~L~~L~l~~~ 236 (239)
T 2xwt_C 179 TKLDAVYLNKNKYLT-VIDKDAFGGVYSGPSLLDVSQTSVTALPSK---GLEHLKELIARNT 236 (239)
T ss_dssp CEEEEEECTTCTTCC-EECTTTTTTCSBCCSEEECTTCCCCCCCCT---TCTTCSEEECTTC
T ss_pred CCCCEEEcCCCCCcc-cCCHHHhhccccCCcEEECCCCccccCChh---HhccCceeeccCc
Confidence 778888888884 77 44433 22 2 4788888888888744333 5667777777765
No 336
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.87 E-value=8.1e-22 Score=216.13 Aligned_cols=243 Identities=16% Similarity=0.175 Sum_probs=185.9
Q ss_pred CEEEccCCcCCccCccccCCCCCCcEEEcccCcCCccCccccccCCCCCEEEccCCccccCCC-cccCCCCCCce-eecc
Q 003158 20 ELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIP-PELSRLPSLVH-MLLD 97 (843)
Q Consensus 20 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~-~~l~~l~~L~~-L~L~ 97 (843)
++++.++++|+ .+|..+ .++|++|+|++|+|+.+.+..|.++++|++|+|++|++.+.++ .+|.++++|.+ +.++
T Consensus 12 ~~v~C~~~~Lt-~iP~~l--~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~ 88 (350)
T 4ay9_X 12 RVFLCQESKVT-EIPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEK 88 (350)
T ss_dssp TEEEEESTTCC-SCCTTC--CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEE
T ss_pred CEEEecCCCCC-ccCcCc--CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhccc
Confidence 67888888888 677665 3678999999999986666778999999999999998865554 56788888765 6677
Q ss_pred CCCCCCCCCcccCCCCCCcEEEcCCCCCCCCCCCccccCCCCCcEEEcCC-CCCCCCCCC-CCCCC-CCCEEEcccCcCC
Q 003158 98 NNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRN-CSLQGPMPD-LSRIP-NLGYLDLSSNQLN 174 (843)
Q Consensus 98 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~-N~l~~~~~~-~~~l~-~L~~L~Ls~N~l~ 174 (843)
+|+|+.+.|..|..+++|++|++++|++.. ..+..+....++..|++.+ |++..+++. |..+. .|+.|+|++|+|+
T Consensus 89 ~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~-~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~ 167 (350)
T 4ay9_X 89 ANNLLYINPEAFQNLPNLQYLLISNTGIKH-LPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQ 167 (350)
T ss_dssp ETTCCEECTTSBCCCTTCCEEEEEEECCSS-CCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCC
T ss_pred CCcccccCchhhhhcccccccccccccccc-CCchhhcccchhhhhhhccccccccccccchhhcchhhhhhcccccccc
Confidence 788988778889999999999999999875 3344566667788888865 678777764 66664 6889999999998
Q ss_pred CCCCCCCCC-cCcCEEEccC-CcCCCCCCcccCCCCCCcEEeCcCccCCCCCCchhhccccCCCCcceeEEc-CCCCCCC
Q 003158 175 GSIPPGRLS-LNITTIKLSN-NKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDF-QNNNLTN 251 (843)
Q Consensus 175 ~~~p~~~~~-~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~l~~~~L~~L~l-~~N~l~~ 251 (843)
.++...+. .+|+.|++++ |.++.+.+..|.++++|+.|+|++|+|+..-+..+..+ +.|.+ ..++++.
T Consensus 168 -~i~~~~f~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~~~~L--------~~L~~l~~~~l~~ 238 (350)
T 4ay9_X 168 -EIHNSAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLENL--------KKLRARSTYNLKK 238 (350)
T ss_dssp -EECTTSSTTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCCCCSSSCTTC--------CEEECTTCTTCCC
T ss_pred -CCChhhccccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcCccChhhhccc--------hHhhhccCCCcCc
Confidence 66665444 4899999975 67776666789999999999999999994333334333 34443 3467888
Q ss_pred CCCCCcCCCCcEEEeccCcccccCC
Q 003158 252 ISGSFNIPPNVTVRLRGNPFCLNTN 276 (843)
Q Consensus 252 ~~~~~~~~~l~~l~l~~Np~~c~~~ 276 (843)
+|....+++|..+++. ||+.|.|-
T Consensus 239 lP~l~~l~~L~~l~l~-~~~~c~~~ 262 (350)
T 4ay9_X 239 LPTLEKLVALMEASLT-YPSHCCAF 262 (350)
T ss_dssp CCCTTTCCSCCEEECS-CHHHHHHH
T ss_pred CCCchhCcChhhCcCC-CCccccch
Confidence 9876689999999985 78888663
No 337
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.87 E-value=1.5e-20 Score=219.84 Aligned_cols=215 Identities=25% Similarity=0.321 Sum_probs=155.1
Q ss_pred CCCCEEEccCCcCCccCccccCCCCCCcEEEcccCcCCccCccccccCCCCCEEEccCCccccCCCcccCCCCCCceeec
Q 003158 17 KSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLL 96 (843)
Q Consensus 17 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L 96 (843)
.+++.|++++|+|+ .+|..+. ++|++|+|++|+|+ .+|. .+++|++|+|++|+|+ .+|. .+++|++|+|
T Consensus 40 ~~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~-~lp~---~l~~L~~L~Ls~N~l~-~lp~---~l~~L~~L~L 108 (622)
T 3g06_A 40 NGNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPA---LPPELRTLEVSGNQLT-SLPV---LPPGLLELSI 108 (622)
T ss_dssp HCCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCS-CCCC---CCTTCCEEEECSCCCS-CCCC---CCTTCCEEEE
T ss_pred CCCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCC-CCCC---cCCCCCEEEcCCCcCC-cCCC---CCCCCCEEEC
Confidence 36999999999999 7787776 89999999999999 5665 6799999999999999 4554 7799999999
Q ss_pred cCCCCCCCCCcccCCCCCCcEEEcCCCCCCCCCCCccccCCCCCcEEEcCCCCCCCCCCCCCCCCCCCEEEcccCcCCCC
Q 003158 97 DNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGS 176 (843)
Q Consensus 97 ~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~ 176 (843)
++|+|++. |. .+++|+.|+|++|+++. +|.. +++|++|+|++|++++++.. +.+|+.|++++|.|+ .
T Consensus 109 s~N~l~~l-~~---~l~~L~~L~L~~N~l~~--lp~~---l~~L~~L~Ls~N~l~~l~~~---~~~L~~L~L~~N~l~-~ 175 (622)
T 3g06_A 109 FSNPLTHL-PA---LPSGLCKLWIFGNQLTS--LPVL---PPGLQELSVSDNQLASLPAL---PSELCKLWAYNNQLT-S 175 (622)
T ss_dssp CSCCCCCC-CC---CCTTCCEEECCSSCCSC--CCCC---CTTCCEEECCSSCCSCCCCC---CTTCCEEECCSSCCS-C
T ss_pred cCCcCCCC-CC---CCCCcCEEECCCCCCCc--CCCC---CCCCCEEECcCCcCCCcCCc---cCCCCEEECCCCCCC-C
Confidence 99999954 44 56899999999999974 5654 48999999999999987653 356777777777776 4
Q ss_pred CCCCCCCcCcCEEEccCCcCCCCCCcccCCCCCCcEEeCcCccCCCCCCchhhccccCCCCcceeEEcCCCCCCCCCCCC
Q 003158 177 IPPGRLSLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGSF 256 (843)
Q Consensus 177 ~p~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~l~~~~L~~L~l~~N~l~~~~~~~ 256 (843)
+| ....+|+.|+|++|.|++ +|.. +++|+.|++++|.|+ .+|..+ ++|+.|+|++|+|++++ .
T Consensus 176 l~--~~~~~L~~L~Ls~N~l~~-l~~~---~~~L~~L~L~~N~l~-~l~~~~--------~~L~~L~Ls~N~L~~lp--~ 238 (622)
T 3g06_A 176 LP--MLPSGLQELSVSDNQLAS-LPTL---PSELYKLWAYNNRLT-SLPALP--------SGLKELIVSGNRLTSLP--V 238 (622)
T ss_dssp CC--CCCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCS-SCCCCC--------TTCCEEECCSSCCSCCC--C
T ss_pred Cc--ccCCCCcEEECCCCCCCC-CCCc---cchhhEEECcCCccc-ccCCCC--------CCCCEEEccCCccCcCC--C
Confidence 55 223467777777777764 3322 355666666666665 333211 34445555555555554 2
Q ss_pred cCCCCcEEEeccCccc
Q 003158 257 NIPPNVTVRLRGNPFC 272 (843)
Q Consensus 257 ~~~~l~~l~l~~Np~~ 272 (843)
.+++++.|++++|.+.
T Consensus 239 ~l~~L~~L~Ls~N~L~ 254 (622)
T 3g06_A 239 LPSELKELMVSGNRLT 254 (622)
T ss_dssp CCTTCCEEECCSSCCS
T ss_pred CCCcCcEEECCCCCCC
Confidence 3455555555555543
No 338
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.86 E-value=5.1e-24 Score=237.09 Aligned_cols=242 Identities=18% Similarity=0.287 Sum_probs=151.5
Q ss_pred cCCccccCCCCCCEEEccCCcCCccCc----cccCCCCCCcEEEcccCc---CCccCcccc-------ccCCCCCEEEcc
Q 003158 8 SIPKEIGNIKSLELLLLNGNELTGSLP----EELGYLPKLDRIQIDQNY---ISGSLPKSF-------ANLNKTRHFHMN 73 (843)
Q Consensus 8 ~~p~~i~~l~~L~~L~L~~n~l~~~~p----~~~~~l~~L~~L~L~~N~---l~~~~~~~~-------~~l~~L~~L~Ls 73 (843)
.++..+..+++|++|+|++|+++...+ ..+..+++|++|+|++|. +++.+|..+ ..+++|++|+|+
T Consensus 23 ~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls 102 (386)
T 2ca6_A 23 SVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLS 102 (386)
T ss_dssp TTSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECC
T ss_pred HHHHHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECC
Confidence 456667777788888888888775533 446677888888887753 334445444 567788888888
Q ss_pred CCcccc----CCCcccCCCCCCceeeccCCCCCCCCCcccC----CC---------CCCcEEEcCCCCCCCCCCC---cc
Q 003158 74 NNSISG----QIPPELSRLPSLVHMLLDNNNLTGYLPPELS----EL---------PKLLILQLDNNNFEGTTIP---AS 133 (843)
Q Consensus 74 ~N~l~~----~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~----~l---------~~L~~L~Ls~N~l~~~~~~---~~ 133 (843)
+|.|+. .++..+..+++|+.|+|++|.++...+..+. .+ ++|++|+|++|++....++ ..
T Consensus 103 ~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~ 182 (386)
T 2ca6_A 103 DNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKT 182 (386)
T ss_dssp SCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHH
T ss_pred CCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHH
Confidence 888775 3555667777888888888877643333333 23 7777888887777532334 35
Q ss_pred ccCCCCCcEEEcCCCCCC--C---CCC-CCCCCCCCCEEEcccCcCC----CCCCCCCCC-cCcCEEEccCCcCCCC---
Q 003158 134 YSNMSKLLKLSLRNCSLQ--G---PMP-DLSRIPNLGYLDLSSNQLN----GSIPPGRLS-LNITTIKLSNNKLTGT--- 199 (843)
Q Consensus 134 ~~~l~~L~~L~L~~N~l~--~---~~~-~~~~l~~L~~L~Ls~N~l~----~~~p~~~~~-~~L~~L~Ls~N~l~~~--- 199 (843)
+..+++|+.|+|++|+++ + +.+ .+..+++|+.|+|++|.++ +.+|..+.. .+|+.|+|++|.|++.
T Consensus 183 l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~ 262 (386)
T 2ca6_A 183 FQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAA 262 (386)
T ss_dssp HHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHH
T ss_pred HHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhHH
Confidence 566777777777777776 2 233 5667777777777777774 234432222 3677777777776654
Q ss_pred -CCccc--CCCCCCcEEeCcCccCCC----CCCchhhccccCCCCcceeEEcCCCCCCCCC
Q 003158 200 -IPSNF--SGLPRLQRLFIANNSLSG----SIPSSIWQSRTLNATETFILDFQNNNLTNIS 253 (843)
Q Consensus 200 -~p~~~--~~l~~L~~L~L~~N~l~~----~~p~~~~~l~~l~~~~L~~L~l~~N~l~~~~ 253 (843)
++..+ ..+++|+.|+|++|.|++ .+|..+.. +.++|+.|+|++|+++...
T Consensus 263 ~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~----~l~~L~~L~l~~N~l~~~~ 319 (386)
T 2ca6_A 263 AVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDE----KMPDLLFLELNGNRFSEED 319 (386)
T ss_dssp HHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHH----HCTTCCEEECTTSBSCTTS
T ss_pred HHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHh----cCCCceEEEccCCcCCcch
Confidence 34444 236667777777777665 24444421 1233446666666666543
No 339
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.86 E-value=1.7e-24 Score=246.95 Aligned_cols=255 Identities=18% Similarity=0.189 Sum_probs=130.1
Q ss_pred CCCEEEccCCcCCc----cCccccCCCCCCcEEEcccCcCCccC---------------------------------ccc
Q 003158 18 SLELLLLNGNELTG----SLPEELGYLPKLDRIQIDQNYISGSL---------------------------------PKS 60 (843)
Q Consensus 18 ~L~~L~L~~n~l~~----~~p~~~~~l~~L~~L~L~~N~l~~~~---------------------------------~~~ 60 (843)
+|++|+|++|+++. .++..+..+++|++|+|++|.+++.. +..
T Consensus 86 ~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~ 165 (461)
T 1z7x_W 86 KIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASV 165 (461)
T ss_dssp CCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHH
T ss_pred ceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHHHHHH
Confidence 45555555555552 33555555555555555555554322 223
Q ss_pred cccCCCCCEEEccCCccccCCCcccC-----CCCCCceeeccCCCCCCC----CCcccCCCCCCcEEEcCCCCCCCCCC-
Q 003158 61 FANLNKTRHFHMNNNSISGQIPPELS-----RLPSLVHMLLDNNNLTGY----LPPELSELPKLLILQLDNNNFEGTTI- 130 (843)
Q Consensus 61 ~~~l~~L~~L~Ls~N~l~~~~~~~l~-----~l~~L~~L~L~~N~l~~~----~~~~~~~l~~L~~L~Ls~N~l~~~~~- 130 (843)
+..+++|++|+|++|.++...+..+. .+++|++|+|++|++++. ++..+..+++|++|+|++|.+.+...
T Consensus 166 l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~ 245 (461)
T 1z7x_W 166 LRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVGMA 245 (461)
T ss_dssp HHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHHHHH
T ss_pred HhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCChHHHH
Confidence 33344444444444444422222221 133555555555555432 23344445555555555555532100
Q ss_pred ---CccccCCCCCcEEEcCCCCCCC-----CCCCCCCCCCCCEEEcccCcCCCCCCCCCC------CcCcCEEEccCCcC
Q 003158 131 ---PASYSNMSKLLKLSLRNCSLQG-----PMPDLSRIPNLGYLDLSSNQLNGSIPPGRL------SLNITTIKLSNNKL 196 (843)
Q Consensus 131 ---~~~~~~l~~L~~L~L~~N~l~~-----~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~------~~~L~~L~Ls~N~l 196 (843)
+..+..+++|++|+|++|.++. ++..+..+++|+.|+|++|.+++..+.... ..+|+.|+|++|.+
T Consensus 246 ~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l 325 (461)
T 1z7x_W 246 ELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSF 325 (461)
T ss_dssp HHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCC
T ss_pred HHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCC
Confidence 1122245556666666665554 222344456666666666665422111100 12666777777766
Q ss_pred CCC----CCcccCCCCCCcEEeCcCccCCCCCCchhhccccCCCCcceeEEcCCCCCCC-----CCCCC-cCCCCcEEEe
Q 003158 197 TGT----IPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTN-----ISGSF-NIPPNVTVRL 266 (843)
Q Consensus 197 ~~~----~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~l~~~~L~~L~l~~N~l~~-----~~~~~-~~~~l~~l~l 266 (843)
++. ++..+..+++|++|+|++|.+++..+..+...-.-..++|+.|+|++|+++. ++... .++.++.|++
T Consensus 326 ~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l 405 (461)
T 1z7x_W 326 TAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDL 405 (461)
T ss_dssp BGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCCCEEEC
T ss_pred chHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCCChhhHHHHHHHHHhCCCccEEEC
Confidence 654 3455556677777777777776554444433211123466677777777773 33333 5677777777
Q ss_pred ccCccc
Q 003158 267 RGNPFC 272 (843)
Q Consensus 267 ~~Np~~ 272 (843)
++|++.
T Consensus 406 ~~N~i~ 411 (461)
T 1z7x_W 406 SNNCLG 411 (461)
T ss_dssp CSSSCC
T ss_pred CCCCCC
Confidence 777764
No 340
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.85 E-value=6.6e-21 Score=204.85 Aligned_cols=214 Identities=21% Similarity=0.354 Sum_probs=140.8
Q ss_pred CCCEEEccCCcCCccCccccCCCCCCcEEEcccCcCCccCccccccCCCCCEEEccCCccccCCCcccCCCCCCceeecc
Q 003158 18 SLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLD 97 (843)
Q Consensus 18 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~ 97 (843)
++..+.+..+.++.... +..+++|++|++++|.++. ++ .+..+++|+.|+|++|.+++..+ +..+++|++|+|+
T Consensus 20 ~~~~~~l~~~~~~~~~~--~~~l~~L~~L~l~~~~i~~-l~-~~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~ 93 (308)
T 1h6u_A 20 NAIKIAAGKSNVTDTVT--QADLDGITTLSAFGTGVTT-IE-GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELS 93 (308)
T ss_dssp HHHHHHTTCSSTTSEEC--HHHHHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECC
T ss_pred HHHHHHhCCCCcCceec--HHHcCCcCEEEeeCCCccC-ch-hhhccCCCCEEEccCCcCCCChh--HccCCCCCEEEcc
Confidence 34445566666664333 4467888888888888874 44 57788888888888888874433 7888888888888
Q ss_pred CCCCCCCCCcccCCCCCCcEEEcCCCCCCCCCCCccccCCCCCcEEEcCCCCCCCCCCCCCCCCCCCEEEcccCcCCCCC
Q 003158 98 NNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSI 177 (843)
Q Consensus 98 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 177 (843)
+|++++. ..+..+++|++|+|++|++++ ++. +..+++|+.|+|++|+++++++ +..+++|+.|+|++|.+++ +
T Consensus 94 ~n~l~~~--~~~~~l~~L~~L~l~~n~l~~--~~~-l~~l~~L~~L~l~~n~l~~~~~-l~~l~~L~~L~l~~n~l~~-~ 166 (308)
T 1h6u_A 94 GNPLKNV--SAIAGLQSIKTLDLTSTQITD--VTP-LAGLSNLQVLYLDLNQITNISP-LAGLTNLQYLSIGNAQVSD-L 166 (308)
T ss_dssp SCCCSCC--GGGTTCTTCCEEECTTSCCCC--CGG-GTTCTTCCEEECCSSCCCCCGG-GGGCTTCCEEECCSSCCCC-C
T ss_pred CCcCCCc--hhhcCCCCCCEEECCCCCCCC--chh-hcCCCCCCEEECCCCccCcCcc-ccCCCCccEEEccCCcCCC-C
Confidence 8888753 367778888888888888864 333 7778888888888888877655 6677777777777777773 3
Q ss_pred CCCCCCcCcCEEEccCCcCCCCCCcccCCCCCCcEEeCcCccCCCCCCchhhccccCCCCcceeEEcCCCCCCCCC
Q 003158 178 PPGRLSLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNIS 253 (843)
Q Consensus 178 p~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~l~~~~L~~L~l~~N~l~~~~ 253 (843)
+......+|+.|+|++|.+++..+ +..+++|++|+|++|++++..+ +.. .++|+.|+|++|.++..+
T Consensus 167 ~~l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~L~~N~l~~~~~--l~~-----l~~L~~L~l~~N~i~~~~ 233 (308)
T 1h6u_A 167 TPLANLSKLTTLKADDNKISDISP--LASLPNLIEVHLKNNQISDVSP--LAN-----TSNLFIVTLTNQTITNQP 233 (308)
T ss_dssp GGGTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECTTSCCCBCGG--GTT-----CTTCCEEEEEEEEEECCC
T ss_pred hhhcCCCCCCEEECCCCccCcChh--hcCCCCCCEEEccCCccCcccc--ccC-----CCCCCEEEccCCeeecCC
Confidence 332223366666666666664332 5666666666666666664332 222 223445555555555443
No 341
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.85 E-value=2.2e-23 Score=229.71 Aligned_cols=252 Identities=20% Similarity=0.225 Sum_probs=198.9
Q ss_pred EEEccCCcCCccCccccCCCCCCcEEEcccCcCCccCc----cccccCC-CCCEEEccCCccccCCCcccCCC-----CC
Q 003158 21 LLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLP----KSFANLN-KTRHFHMNNNSISGQIPPELSRL-----PS 90 (843)
Q Consensus 21 ~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~----~~~~~l~-~L~~L~Ls~N~l~~~~~~~l~~l-----~~ 90 (843)
.++|+.|++++.+|..+...++|++|+|++|.+++..+ ..|..++ +|++|+|++|.|++..+..+..+ ++
T Consensus 2 ~~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~ 81 (362)
T 3goz_A 2 NYKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPAN 81 (362)
T ss_dssp EEECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTT
T ss_pred ccccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCC
Confidence 57899999999999988888889999999999997776 7788898 99999999999998877777664 99
Q ss_pred CceeeccCCCCCCCCCccc----CCC-CCCcEEEcCCCCCCCCCCCcc----ccC-CCCCcEEEcCCCCCCCCCC-----
Q 003158 91 LVHMLLDNNNLTGYLPPEL----SEL-PKLLILQLDNNNFEGTTIPAS----YSN-MSKLLKLSLRNCSLQGPMP----- 155 (843)
Q Consensus 91 L~~L~L~~N~l~~~~~~~~----~~l-~~L~~L~Ls~N~l~~~~~~~~----~~~-l~~L~~L~L~~N~l~~~~~----- 155 (843)
|++|+|++|++++..+..+ ..+ ++|++|+|++|++++ ..+.. +.. .++|++|+|++|.++....
T Consensus 82 L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~-~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~ 160 (362)
T 3goz_A 82 VTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSS-KSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQ 160 (362)
T ss_dssp CCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGG-SCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHH
T ss_pred ccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCc-HHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHH
Confidence 9999999999997766644 444 899999999999975 33333 344 3699999999999986443
Q ss_pred CCCCCC-CCCEEEcccCcCCCCCCCCCC-----C-cCcCEEEccCCcCCCC----CCcccCC-CCCCcEEeCcCccCCCC
Q 003158 156 DLSRIP-NLGYLDLSSNQLNGSIPPGRL-----S-LNITTIKLSNNKLTGT----IPSNFSG-LPRLQRLFIANNSLSGS 223 (843)
Q Consensus 156 ~~~~l~-~L~~L~Ls~N~l~~~~p~~~~-----~-~~L~~L~Ls~N~l~~~----~p~~~~~-l~~L~~L~L~~N~l~~~ 223 (843)
.+..++ +|+.|+|++|++++..+.... . .+|+.|+|++|.|+.. ++..+.. .++|++|+|++|.|++.
T Consensus 161 ~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~ 240 (362)
T 3goz_A 161 ILAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHGP 240 (362)
T ss_dssp HHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHHSCTTCCEEECCSSCCCCC
T ss_pred HHhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhcCCCCceEEECcCCCCCcH
Confidence 234555 999999999999865543211 1 4899999999999974 4445555 45999999999999977
Q ss_pred CCchhhccccCCCCcceeEEcCCCCCCCCCCC--------C-cCCCCcEEEeccCccccc
Q 003158 224 IPSSIWQSRTLNATETFILDFQNNNLTNISGS--------F-NIPPNVTVRLRGNPFCLN 274 (843)
Q Consensus 224 ~p~~~~~l~~l~~~~L~~L~l~~N~l~~~~~~--------~-~~~~l~~l~l~~Np~~c~ 274 (843)
.+..+..+.. ..++|+.|+|++|.+..+... . .++.+..|++++|++...
T Consensus 241 ~~~~l~~~~~-~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~~~ 299 (362)
T 3goz_A 241 SLENLKLLKD-SLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHPS 299 (362)
T ss_dssp CHHHHHHTTT-TTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCCGG
T ss_pred HHHHHHHHHh-cCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCCCc
Confidence 6655554321 345688999999997766532 2 567788899999997644
No 342
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.84 E-value=1.5e-20 Score=189.87 Aligned_cols=179 Identities=18% Similarity=0.261 Sum_probs=119.2
Q ss_pred CEEEccCCcCCccCccccCCCCCCcEEEcccCcCCccCccccccCCCCCEEEccCCccccCCCcccCCCCCCceeeccCC
Q 003158 20 ELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNN 99 (843)
Q Consensus 20 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N 99 (843)
+.++.+++.++ .+|..+ .++|++|+|++|++++..+..|..+++|++|+|++|+|++..+..|..+++|++|+|++|
T Consensus 10 ~~v~c~~~~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n 86 (208)
T 2o6s_A 10 TTVECYSQGRT-SVPTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTN 86 (208)
T ss_dssp TEEECCSSCCS-SCCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEecCCCcc-CCCCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCC
Confidence 56777777777 445433 357777777777777666666777777777777777777555556677777777777777
Q ss_pred CCCCCCCcccCCCCCCcEEEcCCCCCCCCCCCccccCCCCCcEEEcCCCCCCCCCCC-CCCCCCCCEEEcccCcCCCCCC
Q 003158 100 NLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMPD-LSRIPNLGYLDLSSNQLNGSIP 178 (843)
Q Consensus 100 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p 178 (843)
++++..+..|..+++|++|+|++|++++ ..+..|.++++|+.|+|++|+++++++. +..+++|+.|+|++|.+.+..+
T Consensus 87 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~-~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 165 (208)
T 2o6s_A 87 QLQSLPNGVFDKLTQLKELALNTNQLQS-LPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCP 165 (208)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCC-CCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCCCTT
T ss_pred cCCccCHhHhcCccCCCEEEcCCCcCcc-cCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeecCCC
Confidence 7776655666777777777777777764 3344567777777777777777766664 6667777777777776654332
Q ss_pred CCCCCcCcCEEEccCCcCCCCCCcccCCCC
Q 003158 179 PGRLSLNITTIKLSNNKLTGTIPSNFSGLP 208 (843)
Q Consensus 179 ~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~ 208 (843)
+|+.|+++.|.++|.+|..++.++
T Consensus 166 ------~l~~L~~~~n~~~g~ip~~~~~l~ 189 (208)
T 2o6s_A 166 ------GIRYLSEWINKHSGVVRNSAGSVA 189 (208)
T ss_dssp ------TTHHHHHHHHHCTTTBBCTTSSBC
T ss_pred ------CHHHHHHHHHhCCceeeccCcccc
Confidence 455555555555555555555443
No 343
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.84 E-value=1.3e-20 Score=206.42 Aligned_cols=233 Identities=17% Similarity=0.200 Sum_probs=183.2
Q ss_pred CccccccCCccccCCCCCCEEEccCCcCCccCccccCCCCCCcEEEcccCcCCccCc-cccccCCCCCE-EEccCCcccc
Q 003158 2 WNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLP-KSFANLNKTRH-FHMNNNSISG 79 (843)
Q Consensus 2 ~N~i~~~~p~~i~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~-L~Ls~N~l~~ 79 (843)
.|+++ .+|..|. ++|++|+|++|+|+.+.+.+|.++++|++|+|++|++.+.++ ..|.++++|++ +.++.|+|+.
T Consensus 18 ~~~Lt-~iP~~l~--~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~N~l~~ 94 (350)
T 4ay9_X 18 ESKVT-EIPSDLP--RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLY 94 (350)
T ss_dssp STTCC-SCCTTCC--TTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEETTCCE
T ss_pred CCCCC-ccCcCcC--CCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccCCcccc
Confidence 46778 7888773 689999999999997777789999999999999999876554 57899998876 5677899998
Q ss_pred CCCcccCCCCCCceeeccCCCCCCCCCcccCCCCCCcEEEcCC-CCCCCCCCCccccCCC-CCcEEEcCCCCCCCCCCCC
Q 003158 80 QIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDN-NNFEGTTIPASYSNMS-KLLKLSLRNCSLQGPMPDL 157 (843)
Q Consensus 80 ~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~-N~l~~~~~~~~~~~l~-~L~~L~L~~N~l~~~~~~~ 157 (843)
+.|..|.++++|+.|++++|+|+...+..+....++..|++.+ |++.. ..+..|..+. .|+.|+|++|+|+.+++..
T Consensus 95 l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~-l~~~~f~~~~~~l~~L~L~~N~i~~i~~~~ 173 (350)
T 4ay9_X 95 INPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHT-IERNSFVGLSFESVILWLNKNGIQEIHNSA 173 (350)
T ss_dssp ECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCE-ECTTSSTTSBSSCEEEECCSSCCCEECTTS
T ss_pred cCchhhhhccccccccccccccccCCchhhcccchhhhhhhcccccccc-ccccchhhcchhhhhhccccccccCCChhh
Confidence 8899999999999999999999987777788888899999966 56653 2345666664 6899999999999998876
Q ss_pred CCCCCCCEEEccc-CcCCCCCCCCCCC--cCcCEEEccCCcCCCCCCcccCCCCCCcEEeCcCccCCCCCCchhhccccC
Q 003158 158 SRIPNLGYLDLSS-NQLNGSIPPGRLS--LNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTL 234 (843)
Q Consensus 158 ~~l~~L~~L~Ls~-N~l~~~~p~~~~~--~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~l 234 (843)
....+|+.|++++ |.++ .+|...+. .+|+.|||++|+|+...+..|.+ |+.|.+.++.--..+|. +..
T Consensus 174 f~~~~L~~l~l~~~n~l~-~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~~~~---L~~L~~l~~~~l~~lP~-l~~---- 244 (350)
T 4ay9_X 174 FNGTQLDELNLSDNNNLE-ELPNDVFHGASGPVILDISRTRIHSLPSYGLEN---LKKLRARSTYNLKKLPT-LEK---- 244 (350)
T ss_dssp STTEEEEEEECTTCTTCC-CCCTTTTTTEECCSEEECTTSCCCCCCSSSCTT---CCEEECTTCTTCCCCCC-TTT----
T ss_pred ccccchhHHhhccCCccc-CCCHHHhccCcccchhhcCCCCcCccChhhhcc---chHhhhccCCCcCcCCC-chh----
Confidence 6778999999986 5565 88876544 48999999999999665555554 55555544433335663 333
Q ss_pred CCCcceeEEcCCCC
Q 003158 235 NATETFILDFQNNN 248 (843)
Q Consensus 235 ~~~~L~~L~l~~N~ 248 (843)
+++|+.+++.++.
T Consensus 245 -l~~L~~l~l~~~~ 257 (350)
T 4ay9_X 245 -LVALMEASLTYPS 257 (350)
T ss_dssp -CCSCCEEECSCHH
T ss_pred -CcChhhCcCCCCc
Confidence 3466788887653
No 344
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.83 E-value=4.1e-23 Score=229.76 Aligned_cols=256 Identities=18% Similarity=0.191 Sum_probs=195.8
Q ss_pred CCEEEccCCcCCccCccccCCCCCCcEEEcccCcCCccCc----cccccCCCCCEEEccCCc---cccCCCccc------
Q 003158 19 LELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLP----KSFANLNKTRHFHMNNNS---ISGQIPPEL------ 85 (843)
Q Consensus 19 L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~----~~~~~l~~L~~L~Ls~N~---l~~~~~~~l------ 85 (843)
|+...++...+. .++..+..+++|++|+|++|.++...+ ..+..+++|+.|+|++|. +++.+|..+
T Consensus 11 L~~~~l~~~~~~-~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~ 89 (386)
T 2ca6_A 11 LKLDAITTEDEK-SVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQA 89 (386)
T ss_dssp CEESSCCSHHHH-TTSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHH
T ss_pred cccCCCCHHHHH-HHHHHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHH
Confidence 344444444444 577888899999999999999996644 447789999999999964 444555554
Q ss_pred -CCCCCCceeeccCCCCCC----CCCcccCCCCCCcEEEcCCCCCCCC---CCCccccCC---------CCCcEEEcCCC
Q 003158 86 -SRLPSLVHMLLDNNNLTG----YLPPELSELPKLLILQLDNNNFEGT---TIPASYSNM---------SKLLKLSLRNC 148 (843)
Q Consensus 86 -~~l~~L~~L~L~~N~l~~----~~~~~~~~l~~L~~L~Ls~N~l~~~---~~~~~~~~l---------~~L~~L~L~~N 148 (843)
..+++|++|+|++|++++ .++..+..+++|++|+|++|.+.+. .++..+..+ ++|++|+|++|
T Consensus 90 l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n 169 (386)
T 2ca6_A 90 LLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRN 169 (386)
T ss_dssp HTTCTTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSS
T ss_pred HhhCCcccEEECCCCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCC
Confidence 789999999999999997 4677889999999999999999631 122334444 89999999999
Q ss_pred CCCC--CC---CCCCCCCCCCEEEcccCcCCC-----CCC-CCCCCcCcCEEEccCCcCC----CCCCcccCCCCCCcEE
Q 003158 149 SLQG--PM---PDLSRIPNLGYLDLSSNQLNG-----SIP-PGRLSLNITTIKLSNNKLT----GTIPSNFSGLPRLQRL 213 (843)
Q Consensus 149 ~l~~--~~---~~~~~l~~L~~L~Ls~N~l~~-----~~p-~~~~~~~L~~L~Ls~N~l~----~~~p~~~~~l~~L~~L 213 (843)
+++. ++ ..+..+++|+.|+|++|.++. .++ ......+|+.|+|++|.|+ ..+|..+..+++|++|
T Consensus 170 ~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L 249 (386)
T 2ca6_A 170 RLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLREL 249 (386)
T ss_dssp CCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEE
T ss_pred CCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEE
Confidence 9972 22 236678999999999999972 233 2223348999999999996 6788899999999999
Q ss_pred eCcCccCCCCCCchhhc-cccCCCCcceeEEcCCCCCCC-----CCCCC--cCCCCcEEEeccCcccccC
Q 003158 214 FIANNSLSGSIPSSIWQ-SRTLNATETFILDFQNNNLTN-----ISGSF--NIPPNVTVRLRGNPFCLNT 275 (843)
Q Consensus 214 ~L~~N~l~~~~p~~~~~-l~~l~~~~L~~L~l~~N~l~~-----~~~~~--~~~~l~~l~l~~Np~~c~~ 275 (843)
+|++|.|++.....+.. +..-..++|+.|+|++|+|+. ++... .++.+..|++++|++....
T Consensus 250 ~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~~ 319 (386)
T 2ca6_A 250 GLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEED 319 (386)
T ss_dssp ECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTTS
T ss_pred ECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcch
Confidence 99999998663222221 111124577899999999998 66554 4799999999999987554
No 345
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.83 E-value=2.8e-23 Score=236.80 Aligned_cols=267 Identities=17% Similarity=0.202 Sum_probs=149.0
Q ss_pred CccccccCCcc-ccCCCCCCEEEccCCcCCc----cCccccCCCCCCcEEEcccCcCCccCcccc-ccCC----CCCEEE
Q 003158 2 WNKISGSIPKE-IGNIKSLELLLLNGNELTG----SLPEELGYLPKLDRIQIDQNYISGSLPKSF-ANLN----KTRHFH 71 (843)
Q Consensus 2 ~N~i~~~~p~~-i~~l~~L~~L~L~~n~l~~----~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~-~~l~----~L~~L~ 71 (843)
+|+++...... +..+++|++|+|++|+++. .++..+..+++|++|+|++|.++...+..+ ..++ +|++|+
T Consensus 12 ~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~ 91 (461)
T 1z7x_W 12 CEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQTPSCKIQKLS 91 (461)
T ss_dssp SCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCSTTCCCCEEE
T ss_pred hcccCchhHHHHHhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhhCCCceeEEE
Confidence 34555433333 5567777777777777773 345666777777777777777765433333 2344 577777
Q ss_pred ccCCcccc----CCCcccCCCCCCceeeccCCCCCCCCCccc-----CCCCCCcEEEcCCCCCCCCC---CCccccCCCC
Q 003158 72 MNNNSISG----QIPPELSRLPSLVHMLLDNNNLTGYLPPEL-----SELPKLLILQLDNNNFEGTT---IPASYSNMSK 139 (843)
Q Consensus 72 Ls~N~l~~----~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~-----~~l~~L~~L~Ls~N~l~~~~---~~~~~~~l~~ 139 (843)
|++|.|+. .++..+..+++|++|+|++|.+++..+..+ ...++|++|+|++|++++.. ++..+..+++
T Consensus 92 L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~ 171 (461)
T 1z7x_W 92 LQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASVLRAKPD 171 (461)
T ss_dssp CTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCTT
T ss_pred ccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHHHHHHHhhCCC
Confidence 77777773 346667777777777777777764333222 22456777777777765311 2344555677
Q ss_pred CcEEEcCCCCCCCCCCC-CC-----CCCCCCEEEcccCcCCCC----CCCCCC-CcCcCEEEccCCcCCCCC-----Ccc
Q 003158 140 LLKLSLRNCSLQGPMPD-LS-----RIPNLGYLDLSSNQLNGS----IPPGRL-SLNITTIKLSNNKLTGTI-----PSN 203 (843)
Q Consensus 140 L~~L~L~~N~l~~~~~~-~~-----~l~~L~~L~Ls~N~l~~~----~p~~~~-~~~L~~L~Ls~N~l~~~~-----p~~ 203 (843)
|++|+|++|.++..... +. ..++|+.|+|++|.+++. ++.... ..+|+.|+|++|.++... +..
T Consensus 172 L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~ 251 (461)
T 1z7x_W 172 FKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVGMAELCPGL 251 (461)
T ss_dssp CCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHH
T ss_pred CCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCChHHHHHHHHHH
Confidence 77777777776543221 11 244666666666666532 122111 125666666666665422 222
Q ss_pred cCCCCCCcEEeCcCccCCCC----CCchhhccccCCCCcceeEEcCCCCCCCCCCCC-------cCCCCcEEEeccCccc
Q 003158 204 FSGLPRLQRLFIANNSLSGS----IPSSIWQSRTLNATETFILDFQNNNLTNISGSF-------NIPPNVTVRLRGNPFC 272 (843)
Q Consensus 204 ~~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~l~~~~L~~L~l~~N~l~~~~~~~-------~~~~l~~l~l~~Np~~ 272 (843)
+..+++|++|+|++|.+++. ++..+..+ ++|+.|+|++|+++...... ..+.++.|++++|.+.
T Consensus 252 ~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~-----~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~ 326 (461)
T 1z7x_W 252 LHPSSRLRTLWIWECGITAKGCGDLCRVLRAK-----ESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFT 326 (461)
T ss_dssp TSTTCCCCEEECTTSCCCHHHHHHHHHHHHHC-----TTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCB
T ss_pred hcCCCCceEEECcCCCCCHHHHHHHHHHHhhC-----CCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCc
Confidence 33456666666666666543 23333322 23445666666654332111 1245666666666554
Q ss_pred c
Q 003158 273 L 273 (843)
Q Consensus 273 c 273 (843)
.
T Consensus 327 ~ 327 (461)
T 1z7x_W 327 A 327 (461)
T ss_dssp G
T ss_pred h
Confidence 3
No 346
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.82 E-value=4.3e-20 Score=188.15 Aligned_cols=146 Identities=18% Similarity=0.250 Sum_probs=80.6
Q ss_pred CCceeeccCCCCCCCCCcccCCCCCCcEEEcCCCCCCCCCCCccccCCCCCcEEEcCCCCCCCCCCC-CCCCCCCCEEEc
Q 003158 90 SLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMPD-LSRIPNLGYLDL 168 (843)
Q Consensus 90 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~L 168 (843)
+|+.|+|++|+|+++.+..|..+++|++|+|++|++++ ..|..|.++++|+.|+|++|+|+.+++. |..+++
T Consensus 33 ~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~-~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~------ 105 (220)
T 2v9t_B 33 TITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISE-LAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFS------ 105 (220)
T ss_dssp TCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCE-ECTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTT------
T ss_pred CCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCC-cCHHHhhCCcCCCEEECCCCcCCccCHhHccCCCC------
Confidence 44444444444444333344444444444444444432 2234444444444444444444444332 333344
Q ss_pred ccCcCCCCCCCCCCCcCcCEEEccCCcCCCCCCcccCCCCCCcEEeCcCccCCCCCCchhhccccCCCCcceeEEcCCCC
Q 003158 169 SSNQLNGSIPPGRLSLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNN 248 (843)
Q Consensus 169 s~N~l~~~~p~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~l~~~~L~~L~l~~N~ 248 (843)
|+.|+|++|.|++..|..|.++++|+.|+|++|+|++..+..+.
T Consensus 106 -----------------L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~------------------- 149 (220)
T 2v9t_B 106 -----------------LQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFS------------------- 149 (220)
T ss_dssp -----------------CCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTT-------------------
T ss_pred -----------------CCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHh-------------------
Confidence 44444444444445555666777777777777777654444332
Q ss_pred CCCCCCCCcCCCCcEEEeccCcccccCCcccccCCCCC
Q 003158 249 LTNISGSFNIPPNVTVRLRGNPFCLNTNAEQFCGSHSD 286 (843)
Q Consensus 249 l~~~~~~~~~~~l~~l~l~~Np~~c~~~~~~~~~~~~~ 286 (843)
.++.+..|++++|||.|+|.+.|+..|+..
T Consensus 150 --------~l~~L~~L~L~~N~~~c~c~l~~l~~~l~~ 179 (220)
T 2v9t_B 150 --------PLRAIQTMHLAQNPFICDCHLKWLADYLHT 179 (220)
T ss_dssp --------TCTTCCEEECCSSCEECSGGGHHHHHHHHH
T ss_pred --------CCCCCCEEEeCCCCcCCCCccHHHHHHHHh
Confidence 245567888999999999999999888653
No 347
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.82 E-value=4.8e-22 Score=216.68 Aligned_cols=222 Identities=19% Similarity=0.259 Sum_probs=138.2
Q ss_pred CCCEEEccCCcCCccCccccCCC--CCCcEEEcccCcCCccCccccccCCCCCEEEccCCccccC-CCcccCCCCCCcee
Q 003158 18 SLELLLLNGNELTGSLPEELGYL--PKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQ-IPPELSRLPSLVHM 94 (843)
Q Consensus 18 ~L~~L~L~~n~l~~~~p~~~~~l--~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~l~~l~~L~~L 94 (843)
.++.|++++|.+. +..+..+ ++|+.|++++|.+.+..+. +..+++|++|+|++|.+++. ++..+..+++|++|
T Consensus 48 ~~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L 123 (336)
T 2ast_B 48 LWQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNL 123 (336)
T ss_dssp TSSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEE
T ss_pred hheeeccccccCC---HHHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEE
Confidence 3667777777666 4555555 6777777777777755444 44667777777777776644 55666677777777
Q ss_pred eccCCCCCCCCCcccCCCCCCcEEEcCCC-CCCCCCCCccccCCCCCcEEEcCCC-CCCCC--CCCCCCCC-CCCEEEcc
Q 003158 95 LLDNNNLTGYLPPELSELPKLLILQLDNN-NFEGTTIPASYSNMSKLLKLSLRNC-SLQGP--MPDLSRIP-NLGYLDLS 169 (843)
Q Consensus 95 ~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N-~l~~~~~~~~~~~l~~L~~L~L~~N-~l~~~--~~~~~~l~-~L~~L~Ls 169 (843)
+|++|++++..+..+..+++|++|+|++| .+++..++..+.++++|++|+|++| .+++. +..+..++ +|+.|+|+
T Consensus 124 ~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~ 203 (336)
T 2ast_B 124 SLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLS 203 (336)
T ss_dssp ECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECC
T ss_pred eCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeC
Confidence 77777776666666677777777777777 5543224555666777777777777 66642 22355666 77777777
Q ss_pred cC--cCC-CCCCCCC-CCcCcCEEEccCCc-CCCCCCcccCCCCCCcEEeCcCccCCCCCCchhhccccCCCCcceeEEc
Q 003158 170 SN--QLN-GSIPPGR-LSLNITTIKLSNNK-LTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDF 244 (843)
Q Consensus 170 ~N--~l~-~~~p~~~-~~~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~l~~~~L~~L~l 244 (843)
+| .++ +.++... ...+|+.|+|++|. +++..+..+..+++|++|+|++|. +..+..+..+.+ .++|+.|++
T Consensus 204 ~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~--~~~~~~~~~l~~--~~~L~~L~l 279 (336)
T 2ast_B 204 GYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCY--DIIPETLLELGE--IPTLKTLQV 279 (336)
T ss_dssp SCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCT--TCCGGGGGGGGG--CTTCCEEEC
T ss_pred CCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCC--CCCHHHHHHHhc--CCCCCEEec
Confidence 77 333 1222221 12367777777776 665666667777777777777775 233333322322 345667777
Q ss_pred CCC
Q 003158 245 QNN 247 (843)
Q Consensus 245 ~~N 247 (843)
++|
T Consensus 280 ~~~ 282 (336)
T 2ast_B 280 FGI 282 (336)
T ss_dssp TTS
T ss_pred cCc
Confidence 777
No 348
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.82 E-value=3.1e-20 Score=204.40 Aligned_cols=188 Identities=21% Similarity=0.247 Sum_probs=94.0
Q ss_pred cEEEcccCcCCccCccccccCCCCCEEEccCCccccCCCcccC-CCCCCceeeccCCCCCCCCCcccCCCCCCcEEEcCC
Q 003158 44 DRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELS-RLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDN 122 (843)
Q Consensus 44 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~-~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~ 122 (843)
+.+++++|+++ .+|..+. ..++.|+|++|+|++..+..|. ++++|+.|+|++|+|+++.+..|.++++|++|+|++
T Consensus 21 ~~l~c~~~~l~-~iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 97 (361)
T 2xot_A 21 NILSCSKQQLP-NVPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSS 97 (361)
T ss_dssp TEEECCSSCCS-SCCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEEEeCCCCcC-ccCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCC
Confidence 34555555555 3343322 2345555555555544444444 555555555555555544444455555555555555
Q ss_pred CCCCCCCCCccccCCCCCcEEEcCCCCCCCCCC-CCCCCCCCCEEEcccCcCCCCCCCCCCCcCcCEEEccCCcCCCCCC
Q 003158 123 NNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMP-DLSRIPNLGYLDLSSNQLNGSIPPGRLSLNITTIKLSNNKLTGTIP 201 (843)
Q Consensus 123 N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~Ls~N~l~~~~p 201 (843)
|+|+. ..+..|.++++|+.|+|++|+|+++.+ .|..+++|+.|+|++|+|+ +..+
T Consensus 98 N~l~~-~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~-----------------------~l~~ 153 (361)
T 2xot_A 98 NHLHT-LDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQIS-----------------------RFPV 153 (361)
T ss_dssp SCCCE-ECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCC-----------------------SCCG
T ss_pred CcCCc-CCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCC-----------------------eeCH
Confidence 55542 223344444555555555554444433 2444444444444444444 2222
Q ss_pred ccc---CCCCCCcEEeCcCccCCCCCCchhhccccCCCCcceeEEcCCCCCCCCCCCCcCCC--CcEEEeccCcccccCC
Q 003158 202 SNF---SGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGSFNIPP--NVTVRLRGNPFCLNTN 276 (843)
Q Consensus 202 ~~~---~~l~~L~~L~L~~N~l~~~~p~~~~~l~~l~~~~L~~L~l~~N~l~~~~~~~~~~~--l~~l~l~~Np~~c~~~ 276 (843)
..| ..+++|+.|+|++|+|++..+..+.. ++. +..|+|.+|||.|+|.
T Consensus 154 ~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~---------------------------l~~~~l~~l~l~~N~~~C~C~ 206 (361)
T 2xot_A 154 ELIKDGNKLPKLMLLDLSSNKLKKLPLTDLQK---------------------------LPAWVKNGLYLHNNPLECDCK 206 (361)
T ss_dssp GGTC----CTTCCEEECCSSCCCCCCHHHHHH---------------------------SCHHHHTTEECCSSCEECCHH
T ss_pred HHhcCcccCCcCCEEECCCCCCCccCHHHhhh---------------------------ccHhhcceEEecCCCccCCcC
Confidence 222 34555666666666655333233332 222 3568899999999999
Q ss_pred cccc-cCCCC
Q 003158 277 AEQF-CGSHS 285 (843)
Q Consensus 277 ~~~~-~~~~~ 285 (843)
+.++ ..|..
T Consensus 207 l~~~~~~~~~ 216 (361)
T 2xot_A 207 LYQLFSHWQY 216 (361)
T ss_dssp HHHHHHHHHH
T ss_pred cHHHHHHHHH
Confidence 8774 45553
No 349
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.81 E-value=1.5e-19 Score=182.53 Aligned_cols=170 Identities=18% Similarity=0.226 Sum_probs=150.1
Q ss_pred ccccccCCccccCCCCCCEEEccCCcCCccCccccCCCCCCcEEEcccCcCCccCccccccCCCCCEEEccCCccccCCC
Q 003158 3 NKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIP 82 (843)
Q Consensus 3 N~i~~~~p~~i~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~ 82 (843)
|.++ .+|..+ .++|++|+|++|++++..+..|+.+++|++|+|++|++++..+..|..+++|++|+|++|+|++..+
T Consensus 17 ~~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~ 93 (208)
T 2o6s_A 17 QGRT-SVPTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQSLPN 93 (208)
T ss_dssp SCCS-SCCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCT
T ss_pred CCcc-CCCCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCCcCCccCH
Confidence 4455 566555 4689999999999998888889999999999999999997777778999999999999999997777
Q ss_pred cccCCCCCCceeeccCCCCCCCCCcccCCCCCCcEEEcCCCCCCCCCCCccccCCCCCcEEEcCCCCCCCCCCCCCCCCC
Q 003158 83 PELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMPDLSRIPN 162 (843)
Q Consensus 83 ~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~ 162 (843)
..|..+++|++|+|++|+|++..+..|..+++|++|+|++|++++ ..+..+..+++|+.|+|++|.+.+ .+++
T Consensus 94 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~-~~~~~~~~l~~L~~L~l~~N~~~~------~~~~ 166 (208)
T 2o6s_A 94 GVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKS-VPDGVFDRLTSLQYIWLHDNPWDC------TCPG 166 (208)
T ss_dssp TTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSC-CCTTTTTTCTTCCEEECCSCCBCC------CTTT
T ss_pred hHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccce-eCHHHhccCCCccEEEecCCCeec------CCCC
Confidence 778999999999999999998877789999999999999999985 445568999999999999998764 4568
Q ss_pred CCEEEcccCcCCCCCCCCCC
Q 003158 163 LGYLDLSSNQLNGSIPPGRL 182 (843)
Q Consensus 163 L~~L~Ls~N~l~~~~p~~~~ 182 (843)
|+.|+++.|+++|.+|....
T Consensus 167 l~~L~~~~n~~~g~ip~~~~ 186 (208)
T 2o6s_A 167 IRYLSEWINKHSGVVRNSAG 186 (208)
T ss_dssp THHHHHHHHHCTTTBBCTTS
T ss_pred HHHHHHHHHhCCceeeccCc
Confidence 99999999999999998654
No 350
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.81 E-value=5.1e-20 Score=212.62 Aligned_cols=182 Identities=23% Similarity=0.344 Sum_probs=82.7
Q ss_pred CCcEEEcccCcCCccCccccccCCCCCEEEccCCccccCCCcccCCCCCCceeeccCCCCCCCCCcccCCCCCCcEEEcC
Q 003158 42 KLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLD 121 (843)
Q Consensus 42 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls 121 (843)
+|+.|+|++|+|++ +|..+ +++|+.|+|++|+|+ .+| ..+++|+.|+|++|+|++ +|. +.+ +|++|+|+
T Consensus 60 ~L~~L~Ls~n~L~~-lp~~l--~~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls 128 (571)
T 3cvr_A 60 QFSELQLNRLNLSS-LPDNL--PPQITVLEITQNALI-SLP---ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDVD 128 (571)
T ss_dssp TCSEEECCSSCCSC-CCSCC--CTTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECC
T ss_pred CccEEEeCCCCCCc-cCHhH--cCCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC-cch-hhc--CCCEEECC
Confidence 45555555555553 33333 244555555555554 333 234455555555555553 333 332 45555555
Q ss_pred CCCCCCCCCCccccCCCCCcEEEcCCCCCCCCCCCCCCCCCCCEEEcccCcCCCCCCCCCCCcCcCEEEccCCcCCCCCC
Q 003158 122 NNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLSLNITTIKLSNNKLTGTIP 201 (843)
Q Consensus 122 ~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~Ls~N~l~~~~p 201 (843)
+|+|++ +|. .+++|+.|+|++|+|++++. .+++|+.|+|++|+|++ +|.
T Consensus 129 ~N~l~~--lp~---~l~~L~~L~Ls~N~l~~lp~---~l~~L~~L~Ls~N~L~~-lp~---------------------- 177 (571)
T 3cvr_A 129 NNQLTM--LPE---LPALLEYINADNNQLTMLPE---LPTSLEVLSVRNNQLTF-LPE---------------------- 177 (571)
T ss_dssp SSCCSC--CCC---CCTTCCEEECCSSCCSCCCC---CCTTCCEEECCSSCCSC-CCC----------------------
T ss_pred CCcCCC--CCC---cCccccEEeCCCCccCcCCC---cCCCcCEEECCCCCCCC-cch----------------------
Confidence 555543 333 34445555555555544333 33444555555554442 333
Q ss_pred cccCCCCCCcEEeCcCccCCCCCCchhhccccC--CCCcceeEEcCCCCCCCCCCCC-cCCCCcEEEeccCcccc
Q 003158 202 SNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTL--NATETFILDFQNNNLTNISGSF-NIPPNVTVRLRGNPFCL 273 (843)
Q Consensus 202 ~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~l--~~~~L~~L~l~~N~l~~~~~~~-~~~~l~~l~l~~Np~~c 273 (843)
|. ++|+.|+|++|+|+ .+|. +.. +| ..+.|+.|+|++|+|+.+|... .++++..|+|++|++.+
T Consensus 178 --l~--~~L~~L~Ls~N~L~-~lp~-~~~--~L~~~~~~L~~L~Ls~N~l~~lp~~l~~l~~L~~L~L~~N~l~~ 244 (571)
T 3cvr_A 178 --LP--ESLEALDVSTNLLE-SLPA-VPV--RNHHSEETEIFFRCRENRITHIPENILSLDPTCTIILEDNPLSS 244 (571)
T ss_dssp --CC--TTCCEEECCSSCCS-SCCC-CC----------CCEEEECCSSCCCCCCGGGGGSCTTEEEECCSSSCCH
T ss_pred --hh--CCCCEEECcCCCCC-chhh-HHH--hhhcccccceEEecCCCcceecCHHHhcCCCCCEEEeeCCcCCC
Confidence 33 44555555555554 3333 221 11 1111245555555555555433 45555555555555543
No 351
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.81 E-value=7.5e-22 Score=215.13 Aligned_cols=236 Identities=18% Similarity=0.221 Sum_probs=180.3
Q ss_pred CccccCC--CCCCEEEccCCcCCccCccccCCCCCCcEEEcccCcCCcc-CccccccCCCCCEEEccCCccccCCCcccC
Q 003158 10 PKEIGNI--KSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGS-LPKSFANLNKTRHFHMNNNSISGQIPPELS 86 (843)
Q Consensus 10 p~~i~~l--~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~-~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~ 86 (843)
|..+..+ ++++.|++++|.+.+..+. +..+++|++|+|++|.+++. ++..+..+++|++|+|++|.+++..+..+.
T Consensus 61 ~~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~ 139 (336)
T 2ast_B 61 PDVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLA 139 (336)
T ss_dssp HHHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHT
T ss_pred HHHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHh
Confidence 3445555 8899999999999976665 56799999999999998865 778889999999999999999877888888
Q ss_pred CCCCCceeeccCC-CCCCC-CCcccCCCCCCcEEEcCCC-CCCCCCCCccccCCC-CCcEEEcCCCC--CC--CCCCCCC
Q 003158 87 RLPSLVHMLLDNN-NLTGY-LPPELSELPKLLILQLDNN-NFEGTTIPASYSNMS-KLLKLSLRNCS--LQ--GPMPDLS 158 (843)
Q Consensus 87 ~l~~L~~L~L~~N-~l~~~-~~~~~~~l~~L~~L~Ls~N-~l~~~~~~~~~~~l~-~L~~L~L~~N~--l~--~~~~~~~ 158 (843)
.+++|++|+|++| .+++. ++..+.++++|++|+|++| .+++..++..+..++ +|++|+|++|. ++ +++..+.
T Consensus 140 ~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~ 219 (336)
T 2ast_B 140 KNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVR 219 (336)
T ss_dssp TCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHH
T ss_pred cCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHHh
Confidence 9999999999999 67742 5666888999999999999 886533577788899 99999999994 43 2333467
Q ss_pred CCCCCCEEEcccCc-CCCCCCCCCC-CcCcCEEEccCCc-CCCCCCcccCCCCCCcEEeCcCccCCCCCCchhhccccCC
Q 003158 159 RIPNLGYLDLSSNQ-LNGSIPPGRL-SLNITTIKLSNNK-LTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLN 235 (843)
Q Consensus 159 ~l~~L~~L~Ls~N~-l~~~~p~~~~-~~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~l~ 235 (843)
.+++|+.|+|++|. +++..+.... ..+|+.|+|++|. ++......+..+++|+.|+|++| ++.. .+..+..
T Consensus 220 ~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~l~~~~~L~~L~l~~~-i~~~---~~~~l~~-- 293 (336)
T 2ast_B 220 RCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGI-VPDG---TLQLLKE-- 293 (336)
T ss_dssp HCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTTS-SCTT---CHHHHHH--
T ss_pred hCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCCCCCHHHHHHHhcCCCCCEEeccCc-cCHH---HHHHHHh--
Confidence 78999999999999 6654444333 2489999999995 33222236888999999999998 4422 2333321
Q ss_pred CCcceeEEcCCCCCCCCCC
Q 003158 236 ATETFILDFQNNNLTNISG 254 (843)
Q Consensus 236 ~~~L~~L~l~~N~l~~~~~ 254 (843)
.+..|++++|++++..+
T Consensus 294 --~l~~L~l~~n~l~~~~~ 310 (336)
T 2ast_B 294 --ALPHLQINCSHFTTIAR 310 (336)
T ss_dssp --HSTTSEESCCCSCCTTC
T ss_pred --hCcceEEecccCccccC
Confidence 23357788888887654
No 352
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.80 E-value=1.6e-19 Score=183.86 Aligned_cols=163 Identities=19% Similarity=0.232 Sum_probs=94.1
Q ss_pred eeeccCCCCCCCCCcccCCCCCCcEEEcCCCCCCCCCCCccccCCCCCcEEEcCCCCCCCCCC-CCCCCCCCCEEEcccC
Q 003158 93 HMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMP-DLSRIPNLGYLDLSSN 171 (843)
Q Consensus 93 ~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~Ls~N 171 (843)
.+++++|.++ .+|..+. ..+++|+|++|++++...+..|..+++|+.|+|++|+|+++++ .|..+++|+.|+|++|
T Consensus 15 ~l~~s~n~l~-~iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N 91 (220)
T 2v70_A 15 TVDCSNQKLN-KIPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSN 91 (220)
T ss_dssp EEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred EeEeCCCCcc-cCccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCC
Confidence 4555555555 2343332 2345555555555432112335555566666666666555555 3555555655555555
Q ss_pred cCCCCCCCCCC-CcCcCEEEccCCcCCCCCCcccCCCCCCcEEeCcCccCCCCCCchhhccccCCCCcceeEEcCCCCCC
Q 003158 172 QLNGSIPPGRL-SLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLT 250 (843)
Q Consensus 172 ~l~~~~p~~~~-~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~l~~~~L~~L~l~~N~l~ 250 (843)
.|++..+..+. ..+|++|+|++|.|++..|..|.++++|+.|+|++|+|++..|..|.
T Consensus 92 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~--------------------- 150 (220)
T 2v70_A 92 RLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFD--------------------- 150 (220)
T ss_dssp CCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTT---------------------
T ss_pred ccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhc---------------------
Confidence 55532222111 12455555555555555556666666666666666666655555543
Q ss_pred CCCCCCcCCCCcEEEeccCcccccCCcccccCCCC
Q 003158 251 NISGSFNIPPNVTVRLRGNPFCLNTNAEQFCGSHS 285 (843)
Q Consensus 251 ~~~~~~~~~~l~~l~l~~Np~~c~~~~~~~~~~~~ 285 (843)
.++++..|++++|||.|+|.+.++..|+.
T Consensus 151 ------~l~~L~~L~L~~N~l~c~c~l~~l~~~~~ 179 (220)
T 2v70_A 151 ------TLHSLSTLNLLANPFNCNCYLAWLGEWLR 179 (220)
T ss_dssp ------TCTTCCEEECCSCCEECSGGGHHHHHHHH
T ss_pred ------CCCCCCEEEecCcCCcCCCchHHHHHHHH
Confidence 35567788999999999999999988875
No 353
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.79 E-value=1.9e-19 Score=191.80 Aligned_cols=191 Identities=23% Similarity=0.317 Sum_probs=139.3
Q ss_pred CCCCEEEccCCcCCccCccccCCCCCCcEEEcccCcCCccCccccccCCCCCEEEccCCccccCCCcccCCCCCCceeec
Q 003158 17 KSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLL 96 (843)
Q Consensus 17 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L 96 (843)
.++..+.+..+.++...+ +..+++|++|++++|.++.. + .+..+++|+.|+|++|++++..+ +..+++|+.|+|
T Consensus 24 ~~~~~~~l~~~~~~~~~~--~~~l~~L~~L~l~~~~i~~~-~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l 97 (291)
T 1h6t_A 24 AETIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFL 97 (291)
T ss_dssp HHHHHHHTTCSCTTSEEC--HHHHHTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEEC
T ss_pred HHHHHHHhcCCCcccccc--hhhcCcccEEEccCCCcccC-h-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEEC
Confidence 334455666666664333 34677788888888887743 3 37777888888888888875433 777888888888
Q ss_pred cCCCCCCCCCcccCCCCCCcEEEcCCCCCCCCCCCccccCCCCCcEEEcCCCCCCCCCCCCCCCCCCCEEEcccCcCCCC
Q 003158 97 DNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGS 176 (843)
Q Consensus 97 ~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~ 176 (843)
++|++++. ..+..+++|++|+|++|++++ + ..+..+++|+.|+|++|+++++ +.+..+++|+.|+|++|++++.
T Consensus 98 ~~n~l~~~--~~l~~l~~L~~L~L~~n~i~~--~-~~l~~l~~L~~L~l~~n~l~~~-~~l~~l~~L~~L~L~~N~l~~~ 171 (291)
T 1h6t_A 98 DENKVKDL--SSLKDLKKLKSLSLEHNGISD--I-NGLVHLPQLESLYLGNNKITDI-TVLSRLTKLDTLSLEDNQISDI 171 (291)
T ss_dssp CSSCCCCG--GGGTTCTTCCEEECTTSCCCC--C-GGGGGCTTCCEEECCSSCCCCC-GGGGGCTTCSEEECCSSCCCCC
T ss_pred CCCcCCCC--hhhccCCCCCEEECCCCcCCC--C-hhhcCCCCCCEEEccCCcCCcc-hhhccCCCCCEEEccCCccccc
Confidence 88888752 347778888888888888864 2 4577788888888888888776 5577788888888888888754
Q ss_pred CCCCCCCcCcCEEEccCCcCCCCCCcccCCCCCCcEEeCcCccCCC
Q 003158 177 IPPGRLSLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSG 222 (843)
Q Consensus 177 ~p~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 222 (843)
.+ .....+|+.|+|++|.|++. + .+..+++|+.|++++|+++.
T Consensus 172 ~~-l~~l~~L~~L~L~~N~i~~l-~-~l~~l~~L~~L~l~~n~i~~ 214 (291)
T 1h6t_A 172 VP-LAGLTKLQNLYLSKNHISDL-R-ALAGLKNLDVLELFSQECLN 214 (291)
T ss_dssp GG-GTTCTTCCEEECCSSCCCBC-G-GGTTCTTCSEEEEEEEEEEC
T ss_pred hh-hcCCCccCEEECCCCcCCCC-h-hhccCCCCCEEECcCCcccC
Confidence 43 33334788888888888854 3 48899999999999999985
No 354
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.79 E-value=4.6e-19 Score=206.90 Aligned_cols=194 Identities=23% Similarity=0.318 Sum_probs=147.9
Q ss_pred CCCCCEEEccCCcCCccCccccCCCCCCcEEEcccCcCCccCccccccCCCCCEEEccCCccccCCCcccCCCCCCceee
Q 003158 16 IKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHML 95 (843)
Q Consensus 16 l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~ 95 (843)
+..+..+.|..+.+....+ +..|++|+.|+|++|.|.. ++ .+..+++|+.|+|++|.|++..+ +..+++|+.|+
T Consensus 20 l~~l~~l~l~~~~i~~~~~--~~~L~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~ 93 (605)
T 1m9s_A 20 FAETIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLF 93 (605)
T ss_dssp HHHHHHHHTTCSCTTSEEC--HHHHTTCCCCBCTTCCCCC-CT-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEE
T ss_pred HHHHHHHhccCCCcccccc--hhcCCCCCEEECcCCCCCC-Ch-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEE
Confidence 3456666777777775444 4677888888888888874 33 47888888888888888885544 77888888888
Q ss_pred ccCCCCCCCCCcccCCCCCCcEEEcCCCCCCCCCCCccccCCCCCcEEEcCCCCCCCCCCCCCCCCCCCEEEcccCcCCC
Q 003158 96 LDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNG 175 (843)
Q Consensus 96 L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~ 175 (843)
|++|+|++. ..+..+++|+.|+|++|++.+ + ..+..+++|+.|+|++|.|+++ +.+..+++|+.|+|++|.|++
T Consensus 94 Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~--l-~~l~~l~~L~~L~Ls~N~l~~l-~~l~~l~~L~~L~Ls~N~l~~ 167 (605)
T 1m9s_A 94 LDENKIKDL--SSLKDLKKLKSLSLEHNGISD--I-NGLVHLPQLESLYLGNNKITDI-TVLSRLTKLDTLSLEDNQISD 167 (605)
T ss_dssp CCSSCCCCC--TTSTTCTTCCEEECTTSCCCC--C-GGGGGCTTCSEEECCSSCCCCC-GGGGSCTTCSEEECCSSCCCC
T ss_pred CcCCCCCCC--hhhccCCCCCEEEecCCCCCC--C-ccccCCCccCEEECCCCccCCc-hhhcccCCCCEEECcCCcCCC
Confidence 888888753 368888888888888888864 2 4577888888888888888876 567788888888888888886
Q ss_pred CCCCCCCCcCcCEEEccCCcCCCCCCcccCCCCCCcEEeCcCccCCCCC
Q 003158 176 SIPPGRLSLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSI 224 (843)
Q Consensus 176 ~~p~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 224 (843)
..| .....+|+.|+|++|.|++. ..|..+++|+.|+|++|++.+..
T Consensus 168 ~~~-l~~l~~L~~L~Ls~N~i~~l--~~l~~l~~L~~L~L~~N~l~~~p 213 (605)
T 1m9s_A 168 IVP-LAGLTKLQNLYLSKNHISDL--RALAGLKNLDVLELFSQECLNKP 213 (605)
T ss_dssp CGG-GTTCTTCCEEECCSSCCCBC--GGGTTCTTCSEEECCSEEEECCC
T ss_pred chh-hccCCCCCEEECcCCCCCCC--hHHccCCCCCEEEccCCcCcCCc
Confidence 555 33345888888888888864 46888999999999999988543
No 355
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.79 E-value=4.3e-19 Score=188.97 Aligned_cols=192 Identities=23% Similarity=0.397 Sum_probs=112.7
Q ss_pred CCcEEEcccCcCCccCccccccCCCCCEEEccCCccccCCCcccCCCCCCceeeccCCCCCCCCCcccCCCCCCcEEEcC
Q 003158 42 KLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLD 121 (843)
Q Consensus 42 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls 121 (843)
++..+.+..+.+++..+ +..+++|+.|++++|.++.. + .+..+++|++|+|++|++++..+ +..+++|++|+|+
T Consensus 25 ~~~~~~l~~~~~~~~~~--~~~l~~L~~L~l~~~~i~~~-~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~ 98 (291)
T 1h6t_A 25 ETIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLD 98 (291)
T ss_dssp HHHHHHTTCSCTTSEEC--HHHHHTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECC
T ss_pred HHHHHHhcCCCcccccc--hhhcCcccEEEccCCCcccC-h-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECC
Confidence 34444555555553322 45566666666666666633 2 35666666666676666664433 6666666677776
Q ss_pred CCCCCCCCCCccccCCCCCcEEEcCCCCCCCCCCCCCCCCCCCEEEcccCcCCCCCCCCCCCcCcCEEEccCCcCCCCCC
Q 003158 122 NNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLSLNITTIKLSNNKLTGTIP 201 (843)
Q Consensus 122 ~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~Ls~N~l~~~~p 201 (843)
+|++++ + ..+..+++|+.|+|++|+++++ +.+..+++|+.|++++|++++ ++......+|+.|+|++|.+++..+
T Consensus 99 ~n~l~~--~-~~l~~l~~L~~L~L~~n~i~~~-~~l~~l~~L~~L~l~~n~l~~-~~~l~~l~~L~~L~L~~N~l~~~~~ 173 (291)
T 1h6t_A 99 ENKVKD--L-SSLKDLKKLKSLSLEHNGISDI-NGLVHLPQLESLYLGNNKITD-ITVLSRLTKLDTLSLEDNQISDIVP 173 (291)
T ss_dssp SSCCCC--G-GGGTTCTTCCEEECTTSCCCCC-GGGGGCTTCCEEECCSSCCCC-CGGGGGCTTCSEEECCSSCCCCCGG
T ss_pred CCcCCC--C-hhhccCCCCCEEECCCCcCCCC-hhhcCCCCCCEEEccCCcCCc-chhhccCCCCCEEEccCCccccchh
Confidence 666653 2 2366666666677766666654 345666666666776666663 3322223366666676666665443
Q ss_pred cccCCCCCCcEEeCcCccCCCCCCchhhccccCCCCcceeEEcCCCCCCCCC
Q 003158 202 SNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNIS 253 (843)
Q Consensus 202 ~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~l~~~~L~~L~l~~N~l~~~~ 253 (843)
+..+++|+.|+|++|.|++ +| .+.. .++|+.|++++|+++..+
T Consensus 174 --l~~l~~L~~L~L~~N~i~~-l~-~l~~-----l~~L~~L~l~~n~i~~~~ 216 (291)
T 1h6t_A 174 --LAGLTKLQNLYLSKNHISD-LR-ALAG-----LKNLDVLELFSQECLNKP 216 (291)
T ss_dssp --GTTCTTCCEEECCSSCCCB-CG-GGTT-----CTTCSEEEEEEEEEECCC
T ss_pred --hcCCCccCEEECCCCcCCC-Ch-hhcc-----CCCCCEEECcCCcccCCc
Confidence 6666666667776666663 22 1322 234556666666666543
No 356
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.78 E-value=1e-18 Score=179.14 Aligned_cols=164 Identities=18% Similarity=0.239 Sum_probs=78.5
Q ss_pred CEEEccCCccccCCCcccCCCCCCceeeccCCCCCCCCCcccCCCCCCcEEEcCCCCCCCCCCCccccCCCCCcEEEcCC
Q 003158 68 RHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRN 147 (843)
Q Consensus 68 ~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~ 147 (843)
+.++++++.++ .+|..+. ++|+.|+|++|+|++..+..|..+++|++|+|++|+|.. ..+..|.++++|+.|+|++
T Consensus 22 ~~v~c~~~~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~-i~~~~~~~l~~L~~L~Ls~ 97 (229)
T 3e6j_A 22 TTVDCRSKRHA-SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGA-LPVGVFDSLTQLTVLDLGT 97 (229)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCC-CCTTTTTTCTTCCEEECCS
T ss_pred CEeEccCCCcC-ccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCC-cChhhcccCCCcCEEECCC
Confidence 34444444444 3333222 444455555555544444444444444444444444432 1123334444444444444
Q ss_pred CCCCCCCCC-CCCCCCCCEEEcccCcCCCCCCCCCCCcCcCEEEccCCcCCCCCCcccCCCCCCcEEeCcCccCCCCCCc
Q 003158 148 CSLQGPMPD-LSRIPNLGYLDLSSNQLNGSIPPGRLSLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPS 226 (843)
Q Consensus 148 N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~ 226 (843)
|+|+++++. |..+++|+.|+|++|+|+ .+|..+..+++|+.|+|++|+|++..+.
T Consensus 98 N~l~~l~~~~~~~l~~L~~L~Ls~N~l~------------------------~lp~~~~~l~~L~~L~L~~N~l~~~~~~ 153 (229)
T 3e6j_A 98 NQLTVLPSAVFDRLVHLKELFMCCNKLT------------------------ELPRGIERLTHLTHLALDQNQLKSIPHG 153 (229)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCC------------------------SCCTTGGGCTTCSEEECCSSCCCCCCTT
T ss_pred CcCCccChhHhCcchhhCeEeccCCccc------------------------ccCcccccCCCCCEEECCCCcCCccCHH
Confidence 444444432 344444444444444443 2333444444555555555554432222
Q ss_pred hhhccccCCCCcceeEEcCCCCCCCCCCCCcCCCCcEEEeccCcccccCC-cccccCCCCC
Q 003158 227 SIWQSRTLNATETFILDFQNNNLTNISGSFNIPPNVTVRLRGNPFCLNTN-AEQFCGSHSD 286 (843)
Q Consensus 227 ~~~~l~~l~~~~L~~L~l~~N~l~~~~~~~~~~~l~~l~l~~Np~~c~~~-~~~~~~~~~~ 286 (843)
.+. .++++..|++.+|||.|+|. +.++..|+..
T Consensus 154 ~~~---------------------------~l~~L~~L~l~~N~~~c~c~~~~~l~~~~~~ 187 (229)
T 3e6j_A 154 AFD---------------------------RLSSLTHAYLFGNPWDCECRDIMYLRNWVAD 187 (229)
T ss_dssp TTT---------------------------TCTTCCEEECTTSCBCTTBGGGHHHHHHHHH
T ss_pred HHh---------------------------CCCCCCEEEeeCCCccCCcchhHHHHHHHHh
Confidence 221 34566677888888888885 6666666543
No 357
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.78 E-value=2.1e-18 Score=175.61 Aligned_cols=151 Identities=25% Similarity=0.349 Sum_probs=116.9
Q ss_pred CEEEccCCcCCccCccccCCCCCCcEEEcccCcCCccCccccccCCCCCEEEccCCccccCCCcccCCCCCCceeeccCC
Q 003158 20 ELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNN 99 (843)
Q Consensus 20 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N 99 (843)
+.+++++++++ .+|..+. ++|++|+|++|+|++..+..|..+++|+.|+|++|+|++..|..|.++++|++|+|++|
T Consensus 14 ~~v~c~~~~l~-~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N 90 (220)
T 2v9t_B 14 NIVDCRGKGLT-EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGN 90 (220)
T ss_dssp TEEECTTSCCS-SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSS
T ss_pred CEEEcCCCCcC-cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCC
Confidence 57888888888 5665554 67888888888888766677888888888888888888777788888888888888888
Q ss_pred CCCCCCCcccCCCCCCcEEEcCCCCCCCCCCCccccCCCCCcEEEcCCCCCCCCCCC-CCCCCCCCEEEcccCcCC
Q 003158 100 NLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMPD-LSRIPNLGYLDLSSNQLN 174 (843)
Q Consensus 100 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~ 174 (843)
+|+...+..|.++++|++|+|++|++++ ..+..|.++++|+.|+|++|+|+++++. +..+++|+.|+|++|.+.
T Consensus 91 ~l~~l~~~~f~~l~~L~~L~L~~N~l~~-~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 165 (220)
T 2v9t_B 91 KITELPKSLFEGLFSLQLLLLNANKINC-LRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFI 165 (220)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCC-CCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEE
T ss_pred cCCccCHhHccCCCCCCEEECCCCCCCE-eCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcC
Confidence 8886666667778888888888888875 4466777888888888888888877764 777777777777777765
No 358
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.78 E-value=3.5e-19 Score=207.94 Aligned_cols=175 Identities=23% Similarity=0.390 Sum_probs=115.8
Q ss_pred ccCCCCCCEEEccCCcCCccCccccCCCCCCcEEEcccCcCCccCccccccCCCCCEEEccCCccccCCCcccCCCCCCc
Q 003158 13 IGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLV 92 (843)
Q Consensus 13 i~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~ 92 (843)
+..|.+|+.|+|++|.+.. ++ .|+.+++|+.|+|++|.|++..+ +..+++|+.|+|++|.|++. + .+..+++|+
T Consensus 39 ~~~L~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l-~-~l~~l~~L~ 112 (605)
T 1m9s_A 39 QNELNSIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKDL-S-SLKDLKKLK 112 (605)
T ss_dssp HHHHTTCCCCBCTTCCCCC-CT-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCCC-T-TSTTCTTCC
T ss_pred hhcCCCCCEEECcCCCCCC-Ch-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCCC-h-hhccCCCCC
Confidence 3456677777777777763 33 46677777777777777775443 67777777777777777642 2 566777777
Q ss_pred eeeccCCCCCCCCCcccCCCCCCcEEEcCCCCCCCCCCCccccCCCCCcEEEcCCCCCCCCCCCCCCCCCCCEEEcccCc
Q 003158 93 HMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQ 172 (843)
Q Consensus 93 ~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~Ls~N~ 172 (843)
.|+|++|+|++. ..+..+++|+.|+|++|++++ + ..+..+++|+.|+|++|.|+++++ +..+++|+.|+|++|.
T Consensus 113 ~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~--l-~~l~~l~~L~~L~Ls~N~l~~~~~-l~~l~~L~~L~Ls~N~ 186 (605)
T 1m9s_A 113 SLSLEHNGISDI--NGLVHLPQLESLYLGNNKITD--I-TVLSRLTKLDTLSLEDNQISDIVP-LAGLTKLQNLYLSKNH 186 (605)
T ss_dssp EEECTTSCCCCC--GGGGGCTTCSEEECCSSCCCC--C-GGGGSCTTCSEEECCSSCCCCCGG-GTTCTTCCEEECCSSC
T ss_pred EEEecCCCCCCC--ccccCCCccCEEECCCCccCC--c-hhhcccCCCCEEECcCCcCCCchh-hccCCCCCEEECcCCC
Confidence 777777777643 456677777777777777754 2 456677777777777777776665 6677777777777777
Q ss_pred CCCCCCCCCCCcCcCEEEccCCcCCCCC
Q 003158 173 LNGSIPPGRLSLNITTIKLSNNKLTGTI 200 (843)
Q Consensus 173 l~~~~p~~~~~~~L~~L~Ls~N~l~~~~ 200 (843)
|++ ++......+|+.|+|++|.+++..
T Consensus 187 i~~-l~~l~~l~~L~~L~L~~N~l~~~p 213 (605)
T 1m9s_A 187 ISD-LRALAGLKNLDVLELFSQECLNKP 213 (605)
T ss_dssp CCB-CGGGTTCTTCSEEECCSEEEECCC
T ss_pred CCC-ChHHccCCCCCEEEccCCcCcCCc
Confidence 763 443333346777777777776543
No 359
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.77 E-value=2.9e-18 Score=174.57 Aligned_cols=153 Identities=20% Similarity=0.250 Sum_probs=128.4
Q ss_pred CCEEEccCCcCCccCccccCCCCCCcEEEcccCcCCccCc-cccccCCCCCEEEccCCccccCCCcccCCCCCCceeecc
Q 003158 19 LELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLP-KSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLD 97 (843)
Q Consensus 19 L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~ 97 (843)
-+.|++++|.++ .+|..+. ..+++|+|++|+|++..+ ..|..+++|+.|+|++|+|+++.+..|.++++|++|+|+
T Consensus 13 ~~~l~~s~n~l~-~iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls 89 (220)
T 2v70_A 13 GTTVDCSNQKLN-KIPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLT 89 (220)
T ss_dssp TTEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECC
T ss_pred CCEeEeCCCCcc-cCccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECC
Confidence 468999999998 5676554 456899999999997644 458889999999999999998877789999999999999
Q ss_pred CCCCCCCCCcccCCCCCCcEEEcCCCCCCCCCCCccccCCCCCcEEEcCCCCCCCCCC-CCCCCCCCCEEEcccCcCCC
Q 003158 98 NNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMP-DLSRIPNLGYLDLSSNQLNG 175 (843)
Q Consensus 98 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~ 175 (843)
+|+|++..+..|.++++|++|+|++|++++ ..|..|.++++|+.|+|++|+++++++ .|..+++|+.|+|++|.+.+
T Consensus 90 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c 167 (220)
T 2v70_A 90 SNRLENVQHKMFKGLESLKTLMLRSNRITC-VGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNC 167 (220)
T ss_dssp SSCCCCCCGGGGTTCSSCCEEECTTSCCCC-BCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEEC
T ss_pred CCccCccCHhHhcCCcCCCEEECCCCcCCe-ECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcC
Confidence 999998877888899999999999999986 457888888999999999999988866 48888888888888888874
No 360
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.77 E-value=5.4e-18 Score=173.79 Aligned_cols=152 Identities=18% Similarity=0.214 Sum_probs=117.8
Q ss_pred CCCEEEccCCcCCccCccccCCCCCCcEEEcccCcCCccCccccccCCCCCEEEccCCccccCCCcccCCCCCCceeecc
Q 003158 18 SLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLD 97 (843)
Q Consensus 18 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~ 97 (843)
+.+.++.++++++ .+|..+. ++|++|+|++|+|++..+..|.++++|+.|+|++|+|+.+.+..|..+++|+.|+|+
T Consensus 20 s~~~v~c~~~~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls 96 (229)
T 3e6j_A 20 SGTTVDCRSKRHA-SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLG 96 (229)
T ss_dssp ETTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred eCCEeEccCCCcC-ccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECC
Confidence 3567888888887 5665544 778888888888887777788888888888888888876666667788888888888
Q ss_pred CCCCCCCCCcccCCCCCCcEEEcCCCCCCCCCCCccccCCCCCcEEEcCCCCCCCCCCC-CCCCCCCCEEEcccCcCC
Q 003158 98 NNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMPD-LSRIPNLGYLDLSSNQLN 174 (843)
Q Consensus 98 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~ 174 (843)
+|+|++..+..|..+++|++|+|++|+|+ .+|..+..+++|+.|+|++|+|+++++. +..+++|+.|+|++|.+.
T Consensus 97 ~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~--~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~ 172 (229)
T 3e6j_A 97 TNQLTVLPSAVFDRLVHLKELFMCCNKLT--ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWD 172 (229)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCC--SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBC
T ss_pred CCcCCccChhHhCcchhhCeEeccCCccc--ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCcc
Confidence 88888766667778888888888888886 5677778888888888888888877764 777777777777777776
No 361
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.77 E-value=8.5e-19 Score=183.19 Aligned_cols=136 Identities=19% Similarity=0.108 Sum_probs=107.8
Q ss_pred CCCCCcccccCCeeEEEEEe-CCCcE--EEEEEeccCChh------------------------hHHHHHHHHHHHHhcc
Q 003158 513 FNSSTQIGQGGYGKVYKGIL-PDGTV--VAVKRAQEGSLQ------------------------GEKEFLTEIQFLSRLH 565 (843)
Q Consensus 513 ~~~~~~lg~G~~g~Vy~~~~-~~~~~--vavK~~~~~~~~------------------------~~~~~~~E~~~l~~l~ 565 (843)
|++.+.||+|+||.||+|.. .+|+. ||||++...... ....+.+|++++++++
T Consensus 49 ~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 128 (258)
T 1zth_A 49 TAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAK 128 (258)
T ss_dssp EEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHH
T ss_pred hhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHH
Confidence 56778999999999999997 68988 999987543111 1236789999999999
Q ss_pred CCcc--cceeeeeecCCcEEEEEecCCC-C----CHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHh-cCCCCCEEecc
Q 003158 566 HRNL--VSLVGYCDEEGEQMLVYEFMSN-G----TLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLH-TEADPPVFHRD 637 (843)
Q Consensus 566 h~nI--v~l~~~~~~~~~~~lV~e~~~~-g----sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH-~~~~~~iiH~D 637 (843)
|+++ ..++++ +..+|||||+.+ | +|.++... .++..+..++.|++.||.||| +.+ |+|||
T Consensus 129 ~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~-----~~~~~~~~i~~qi~~~l~~lH~~~g---ivHrD 196 (258)
T 1zth_A 129 EAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE-----LKELDVEGIFNDVVENVKRLYQEAE---LVHAD 196 (258)
T ss_dssp HTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG-----GGGSCHHHHHHHHHHHHHHHHHTSC---EECSS
T ss_pred hCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc-----cChHHHHHHHHHHHHHHHHHHHHCC---EEeCC
Confidence 8864 333332 367899999942 4 77776532 235567889999999999999 888 99999
Q ss_pred CCCCcEEEcCCCcEEEeeccccccC
Q 003158 638 IKASNILLDHKFTAKVADFGLSRLA 662 (843)
Q Consensus 638 lkp~NILl~~~~~~kl~DfGla~~~ 662 (843)
|||+|||+++ .++|+|||+|...
T Consensus 197 lkp~NILl~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 197 LSEYNIMYID--KVYFIDMGQAVTL 219 (258)
T ss_dssp CSTTSEEESS--SEEECCCTTCEET
T ss_pred CCHHHEEEcC--cEEEEECcccccC
Confidence 9999999998 9999999999754
No 362
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.76 E-value=1.8e-18 Score=190.23 Aligned_cols=152 Identities=22% Similarity=0.284 Sum_probs=134.1
Q ss_pred CCEEEccCCcCCccCccccCCCCCCcEEEcccCcCCccCccccc-cCCCCCEEEccCCccccCCCcccCCCCCCceeecc
Q 003158 19 LELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFA-NLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLD 97 (843)
Q Consensus 19 L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~-~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~ 97 (843)
-+.+++++++|+ .+|..+. +.++.|+|++|+|++..+..|. ++++|+.|+|++|+|+++.+..|.++++|+.|+|+
T Consensus 20 ~~~l~c~~~~l~-~iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls 96 (361)
T 2xot_A 20 SNILSCSKQQLP-NVPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLS 96 (361)
T ss_dssp TTEEECCSSCCS-SCCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECC
T ss_pred CCEEEeCCCCcC-ccCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECC
Confidence 478999999999 5776654 4689999999999988888887 99999999999999998888899999999999999
Q ss_pred CCCCCCCCCcccCCCCCCcEEEcCCCCCCCCCCCccccCCCCCcEEEcCCCCCCCCCCC-C---CCCCCCCEEEcccCcC
Q 003158 98 NNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMPD-L---SRIPNLGYLDLSSNQL 173 (843)
Q Consensus 98 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~---~~l~~L~~L~Ls~N~l 173 (843)
+|+|+...+..|.++++|++|+|++|+|.+ ..+..|.++++|+.|+|++|+|+.++.. + ..+++|+.|+|++|+|
T Consensus 97 ~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~-~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l 175 (361)
T 2xot_A 97 SNHLHTLDEFLFSDLQALEVLLLYNNHIVV-VDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKL 175 (361)
T ss_dssp SSCCCEECTTTTTTCTTCCEEECCSSCCCE-ECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCC
T ss_pred CCcCCcCCHHHhCCCcCCCEEECCCCcccE-ECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCC
Confidence 999998888889999999999999999985 4578899999999999999999998875 4 4577777777777777
Q ss_pred C
Q 003158 174 N 174 (843)
Q Consensus 174 ~ 174 (843)
+
T Consensus 176 ~ 176 (361)
T 2xot_A 176 K 176 (361)
T ss_dssp C
T ss_pred C
Confidence 6
No 363
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.75 E-value=2.2e-18 Score=172.34 Aligned_cols=153 Identities=17% Similarity=0.281 Sum_probs=102.1
Q ss_pred cCCCCCCEEEccCCcCCccCccccCCCCCCcEEEcccCcCCccCccccccCCCCCEEEccCCccccCCCcccCCCCCCce
Q 003158 14 GNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVH 93 (843)
Q Consensus 14 ~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~ 93 (843)
..+++|+.|++++|.++ .+| .+..+++|++|++++|.++ .+..+..+++|++|++++|.+++..+..+..+++|++
T Consensus 41 ~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~ 116 (197)
T 4ezg_A 41 AQMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTL 116 (197)
T ss_dssp HHHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCE
T ss_pred hhcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCCE
Confidence 45667777777777777 444 5677777777777777665 2235667777777777777777656666777777777
Q ss_pred eeccCCCCCCCCCcccCCCCCCcEEEcCCCC-CCCCCCCccccCCCCCcEEEcCCCCCCCCCCCCCCCCCCCEEEcccCc
Q 003158 94 MLLDNNNLTGYLPPELSELPKLLILQLDNNN-FEGTTIPASYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQ 172 (843)
Q Consensus 94 L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~-l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~Ls~N~ 172 (843)
|+|++|++++..+..+..+++|++|+|++|+ +. .++ .+..+++|+.|+|++|++++++ .+..+++|+.|++++|+
T Consensus 117 L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~--~~~-~l~~l~~L~~L~l~~n~i~~~~-~l~~l~~L~~L~l~~N~ 192 (197)
T 4ezg_A 117 LDISHSAHDDSILTKINTLPKVNSIDLSYNGAIT--DIM-PLKTLPELKSLNIQFDGVHDYR-GIEDFPKLNQLYAFSQT 192 (197)
T ss_dssp EECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCC--CCG-GGGGCSSCCEEECTTBCCCCCT-TGGGCSSCCEEEECBC-
T ss_pred EEecCCccCcHhHHHHhhCCCCCEEEccCCCCcc--ccH-hhcCCCCCCEEECCCCCCcChH-HhccCCCCCEEEeeCcc
Confidence 7777777776566667777777777777776 54 233 5666777777777777776644 56666677777777776
Q ss_pred CC
Q 003158 173 LN 174 (843)
Q Consensus 173 l~ 174 (843)
+.
T Consensus 193 i~ 194 (197)
T 4ezg_A 193 IG 194 (197)
T ss_dssp --
T ss_pred cC
Confidence 64
No 364
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.74 E-value=6.5e-21 Score=221.24 Aligned_cols=190 Identities=18% Similarity=0.179 Sum_probs=124.1
Q ss_pred cCCCCCCEEEccCCcCCccCccccCCCCCCcEEEcccCc-------------CCccCccccccCCCCCEEE-ccCCcccc
Q 003158 14 GNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNY-------------ISGSLPKSFANLNKTRHFH-MNNNSISG 79 (843)
Q Consensus 14 ~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~-------------l~~~~~~~~~~l~~L~~L~-Ls~N~l~~ 79 (843)
..+++|+.|+|++|+|+ .+|+.++++++|+.|++++|. +.+..|..+.++++|+.|+ ++.|.+.
T Consensus 346 ~~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~~- 423 (567)
T 1dce_A 346 ATDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYLD- 423 (567)
T ss_dssp STTTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHHH-
T ss_pred ccCccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhcccc-
Confidence 45667777777777776 667777777777777776554 3445555566666666665 4444332
Q ss_pred CCCcccCCCCCCceeeccCCCCCCCCCcccCCCCCCcEEEcCCCCCCCCCCCccccCCCCCcEEEcCCCCCCCCCCCCCC
Q 003158 80 QIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMPDLSR 159 (843)
Q Consensus 80 ~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 159 (843)
+|..+.+++|.|+...+ ..|+.|+|++|+|++ +|. +.++++|+.|+|++|+|+.+|..+..
T Consensus 424 ----------~L~~l~l~~n~i~~l~~------~~L~~L~Ls~n~l~~--lp~-~~~l~~L~~L~Ls~N~l~~lp~~~~~ 484 (567)
T 1dce_A 424 ----------DLRSKFLLENSVLKMEY------ADVRVLHLAHKDLTV--LCH-LEQLLLVTHLDLSHNRLRALPPALAA 484 (567)
T ss_dssp ----------HHHHHHHHHHHHHHHHH------TTCSEEECTTSCCSS--CCC-GGGGTTCCEEECCSSCCCCCCGGGGG
T ss_pred ----------hhhhhhhhcccccccCc------cCceEEEecCCCCCC--CcC-ccccccCcEeecCcccccccchhhhc
Confidence 33444455555542211 247777777777764 455 77777777777777777766666777
Q ss_pred CCCCCEEEcccCcCCCCCCCCCCCcCcCEEEccCCcCCCCC-CcccCCCCCCcEEeCcCccCCCCCC
Q 003158 160 IPNLGYLDLSSNQLNGSIPPGRLSLNITTIKLSNNKLTGTI-PSNFSGLPRLQRLFIANNSLSGSIP 225 (843)
Q Consensus 160 l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~L~~N~l~~~~p 225 (843)
+++|+.|+|++|+|++ +|......+|+.|+|++|+|++.. |..|.++++|+.|+|++|+|++..|
T Consensus 485 l~~L~~L~Ls~N~l~~-lp~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~ 550 (567)
T 1dce_A 485 LRCLEVLQASDNALEN-VDGVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEG 550 (567)
T ss_dssp CTTCCEEECCSSCCCC-CGGGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSS
T ss_pred CCCCCEEECCCCCCCC-CcccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCcc
Confidence 7777777777777774 553223346777777777777665 7777778888888888888775544
No 365
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.73 E-value=2.8e-18 Score=179.77 Aligned_cols=171 Identities=22% Similarity=0.299 Sum_probs=95.9
Q ss_pred CCCCCCEEEccCCcCCccCccccCCCCCCcEEEcccCcCCccCccccccCCCCCEEEccCCccccCCCcccCCCCCCcee
Q 003158 15 NIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHM 94 (843)
Q Consensus 15 ~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L 94 (843)
++.++..+++++|.++... .+..+++|++|++++|+++ .++ .+..+++|+.|+|++|+|++..+ +..+++|+.|
T Consensus 17 ~l~~l~~l~l~~~~i~~~~--~~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L 90 (263)
T 1xeu_A 17 GLANAVKQNLGKQSVTDLV--SQKELSGVQNFNGDNSNIQ-SLA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEEL 90 (263)
T ss_dssp HHHHHHHHHHTCSCTTSEE--CHHHHTTCSEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEE
T ss_pred HHHHHHHHHhcCCCccccc--chhhcCcCcEEECcCCCcc-cch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEE
Confidence 3455666666666666322 4556666666666666666 333 45666666666666666664322 5566666666
Q ss_pred eccCCCCCCCCCcccCCCCCCcEEEcCCCCCCCCCCCccccCCCCCcEEEcCCCCCCCCCCCCCCCCCCCEEEcccCcCC
Q 003158 95 LLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLN 174 (843)
Q Consensus 95 ~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~Ls~N~l~ 174 (843)
+|++|++++. +. +.. ++|++|+|++|++++ + ..+..+++|+.|+|++|++++++ .+..+++|
T Consensus 91 ~L~~N~l~~l-~~-~~~-~~L~~L~L~~N~l~~--~-~~l~~l~~L~~L~Ls~N~i~~~~-~l~~l~~L----------- 152 (263)
T 1xeu_A 91 SVNRNRLKNL-NG-IPS-ACLSRLFLDNNELRD--T-DSLIHLKNLEILSIRNNKLKSIV-MLGFLSKL----------- 152 (263)
T ss_dssp ECCSSCCSCC-TT-CCC-SSCCEEECCSSCCSB--S-GGGTTCTTCCEEECTTSCCCBCG-GGGGCTTC-----------
T ss_pred ECCCCccCCc-Cc-ccc-CcccEEEccCCccCC--C-hhhcCcccccEEECCCCcCCCCh-HHccCCCC-----------
Confidence 6666666532 22 222 555555555555543 1 23555555555555555555442 34444444
Q ss_pred CCCCCCCCCcCcCEEEccCCcCCCCCCcccCCCCCCcEEeCcCccCCCC
Q 003158 175 GSIPPGRLSLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGS 223 (843)
Q Consensus 175 ~~~p~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 223 (843)
+.|+|++|.+++. ..+..+++|+.|+|++|++++.
T Consensus 153 ------------~~L~L~~N~i~~~--~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 153 ------------EVLDLHGNEITNT--GGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp ------------CEEECTTSCCCBC--TTSTTCCCCCEEEEEEEEEECC
T ss_pred ------------CEEECCCCcCcch--HHhccCCCCCEEeCCCCcccCC
Confidence 4444444444443 4577778888888888888744
No 366
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.73 E-value=8.9e-18 Score=175.96 Aligned_cols=160 Identities=21% Similarity=0.371 Sum_probs=138.6
Q ss_pred CccccccCCccccCCCCCCEEEccCCcCCccCccccCCCCCCcEEEcccCcCCccCccccccCCCCCEEEccCCccccCC
Q 003158 2 WNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQI 81 (843)
Q Consensus 2 ~N~i~~~~p~~i~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 81 (843)
.|.+++ ++ .+..+++|++|++++|+++ .++ .++.+++|++|+|++|+|++..+ +..+++|+.|+|++|++++.
T Consensus 28 ~~~i~~-~~-~~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~L~~N~l~~l- 100 (263)
T 1xeu_A 28 KQSVTD-LV-SQKELSGVQNFNGDNSNIQ-SLA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEELSVNRNRLKNL- 100 (263)
T ss_dssp CSCTTS-EE-CHHHHTTCSEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEEECCSSCCSCC-
T ss_pred CCCccc-cc-chhhcCcCcEEECcCCCcc-cch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEEECCCCccCCc-
Confidence 356664 33 6788999999999999999 455 79999999999999999996554 99999999999999999954
Q ss_pred CcccCCCCCCceeeccCCCCCCCCCcccCCCCCCcEEEcCCCCCCCCCCCccccCCCCCcEEEcCCCCCCCCCCCCCCCC
Q 003158 82 PPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMPDLSRIP 161 (843)
Q Consensus 82 ~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~ 161 (843)
+. +.. ++|+.|+|++|+|++. ..+..+++|+.|+|++|++++ ++ .+..+++|+.|+|++|++++. ..+..++
T Consensus 101 ~~-~~~-~~L~~L~L~~N~l~~~--~~l~~l~~L~~L~Ls~N~i~~--~~-~l~~l~~L~~L~L~~N~i~~~-~~l~~l~ 172 (263)
T 1xeu_A 101 NG-IPS-ACLSRLFLDNNELRDT--DSLIHLKNLEILSIRNNKLKS--IV-MLGFLSKLEVLDLHGNEITNT-GGLTRLK 172 (263)
T ss_dssp TT-CCC-SSCCEEECCSSCCSBS--GGGTTCTTCCEEECTTSCCCB--CG-GGGGCTTCCEEECTTSCCCBC-TTSTTCC
T ss_pred Cc-ccc-CcccEEEccCCccCCC--hhhcCcccccEEECCCCcCCC--Ch-HHccCCCCCEEECCCCcCcch-HHhccCC
Confidence 43 333 9999999999999964 469999999999999999975 34 689999999999999999988 6689999
Q ss_pred CCCEEEcccCcCCCC
Q 003158 162 NLGYLDLSSNQLNGS 176 (843)
Q Consensus 162 ~L~~L~Ls~N~l~~~ 176 (843)
+|+.|++++|.+++.
T Consensus 173 ~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 173 KVNWIDLTGQKCVNE 187 (263)
T ss_dssp CCCEEEEEEEEEECC
T ss_pred CCCEEeCCCCcccCC
Confidence 999999999999843
No 367
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.71 E-value=2.1e-17 Score=165.26 Aligned_cols=153 Identities=17% Similarity=0.324 Sum_probs=87.5
Q ss_pred CCCCCCcEEEcccCcCCccCccccccCCCCCEEEccCCccccCCCcccCCCCCCceeeccCCCCCCCCCcccCCCCCCcE
Q 003158 38 GYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLI 117 (843)
Q Consensus 38 ~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 117 (843)
+.+++|++|++++|.++ .+| .+..+++|++|++++|.++. +..+..+++|++|+|++|++++..+..+..+++|++
T Consensus 41 ~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~~--~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~ 116 (197)
T 4ezg_A 41 AQMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHATN--YNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTL 116 (197)
T ss_dssp HHHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCSC--CGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCE
T ss_pred hhcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCCc--chhhhcCCCCCEEEeECCccCcccChhhcCCCCCCE
Confidence 44566666666666666 334 46666666666666665542 235556666666666666666555556666666666
Q ss_pred EEcCCCCCCCCCCCccccCCCCCcEEEcCCCC-CCCCCCCCCCCCCCCEEEcccCcCCCCCCCCCCCcCcCEEEccCCcC
Q 003158 118 LQLDNNNFEGTTIPASYSNMSKLLKLSLRNCS-LQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLSLNITTIKLSNNKL 196 (843)
Q Consensus 118 L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~-l~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~Ls~N~l 196 (843)
|+|++|++++ ..+..+..+++|+.|+|++|. ++.++ .+..+++|+.|++++|.++
T Consensus 117 L~Ls~n~i~~-~~~~~l~~l~~L~~L~L~~n~~i~~~~-~l~~l~~L~~L~l~~n~i~---------------------- 172 (197)
T 4ezg_A 117 LDISHSAHDD-SILTKINTLPKVNSIDLSYNGAITDIM-PLKTLPELKSLNIQFDGVH---------------------- 172 (197)
T ss_dssp EECCSSBCBG-GGHHHHTTCSSCCEEECCSCTBCCCCG-GGGGCSSCCEEECTTBCCC----------------------
T ss_pred EEecCCccCc-HhHHHHhhCCCCCEEEccCCCCccccH-hhcCCCCCCEEECCCCCCc----------------------
Confidence 6666666653 345555566666666666665 44332 3455555555555555554
Q ss_pred CCCCCcccCCCCCCcEEeCcCccCC
Q 003158 197 TGTIPSNFSGLPRLQRLFIANNSLS 221 (843)
Q Consensus 197 ~~~~p~~~~~l~~L~~L~L~~N~l~ 221 (843)
+. + .+..+++|++|++++|++.
T Consensus 173 -~~-~-~l~~l~~L~~L~l~~N~i~ 194 (197)
T 4ezg_A 173 -DY-R-GIEDFPKLNQLYAFSQTIG 194 (197)
T ss_dssp -CC-T-TGGGCSSCCEEEECBC---
T ss_pred -Ch-H-HhccCCCCCEEEeeCcccC
Confidence 32 2 4666677777777777765
No 368
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.71 E-value=1.9e-18 Score=206.84 Aligned_cols=190 Identities=18% Similarity=0.168 Sum_probs=109.2
Q ss_pred CCCCEEEccCCcCCccCccccCCCCCCcE-----EEcccCcCCccCccccccCCCCCEEEccCCccccCCCcccCCCCCC
Q 003158 17 KSLELLLLNGNELTGSLPEELGYLPKLDR-----IQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSL 91 (843)
Q Consensus 17 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~-----L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L 91 (843)
++++.|+|.+|.+.. .+..+....+|.. ++++.|.+. ..+..|..+++|+.|+|++|.|. .+|..+..+++|
T Consensus 173 ~~~~~l~L~~n~~~~-~~~~~l~~l~Ls~~~i~~~~~~~n~~~-~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L 249 (727)
T 4b8c_D 173 PLTPKIELFANGKDE-ANQALLQHKKLSQYSIDEDDDIENRMV-MPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFL 249 (727)
T ss_dssp ---------------------------------------------------CCCCCCEEECTTSCCS-CCCGGGGGCCSC
T ss_pred CccceEEeeCCCCCc-chhhHhhcCccCcccccCcccccccee-cChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCC
Confidence 568888998888884 3433333222222 233334444 55777888888888888888888 667667788888
Q ss_pred ceeeccCCCCCCCCCcccCCCCCCcEEEcCCCCCCCCCCCccccCCCCCcEEEcCCCCCCCCCCCCCCCCCCCEEEcccC
Q 003158 92 VHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSN 171 (843)
Q Consensus 92 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~Ls~N 171 (843)
++|+|++|+|+ .+|..|.++++|++|+|++|+|+ .+|..|.++++|+.|+|++|.|+.++..|..+++|+.|+|++|
T Consensus 250 ~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~--~lp~~~~~l~~L~~L~L~~N~l~~lp~~~~~l~~L~~L~L~~N 326 (727)
T 4b8c_D 250 TRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT--SLPAELGSCFQLKYFYFFDNMVTTLPWEFGNLCNLQFLGVEGN 326 (727)
T ss_dssp SCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS--SCCSSGGGGTTCSEEECCSSCCCCCCSSTTSCTTCCCEECTTS
T ss_pred CEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC--ccChhhcCCCCCCEEECCCCCCCccChhhhcCCCccEEeCCCC
Confidence 88888888888 77888888888888888888886 5688888888888888888888877777888888888888888
Q ss_pred cCCCCCCCCCCCc--CcCEEEccCCcCCCCCCcccCCCCCCcEEeCcCc
Q 003158 172 QLNGSIPPGRLSL--NITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANN 218 (843)
Q Consensus 172 ~l~~~~p~~~~~~--~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 218 (843)
.|++.+|..+... .+..|+|++|.+++.+|.. |+.|+++.|
T Consensus 327 ~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~~------l~~l~l~~n 369 (727)
T 4b8c_D 327 PLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPHE------RRFIEINTD 369 (727)
T ss_dssp CCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC---------------
T ss_pred ccCCCChHHHhhcchhhhHHhhccCcccCcCccc------cceeEeecc
Confidence 8887666654332 2334677888887777654 344556655
No 369
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.69 E-value=9e-20 Score=211.63 Aligned_cols=201 Identities=20% Similarity=0.228 Sum_probs=150.4
Q ss_pred CCCCCCcEEEcccCcCCccCccccccCCCCCEEEccCCc-------------cccCCCcccCCCCCCceee-ccCCCCCC
Q 003158 38 GYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNS-------------ISGQIPPELSRLPSLVHML-LDNNNLTG 103 (843)
Q Consensus 38 ~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~-------------l~~~~~~~l~~l~~L~~L~-L~~N~l~~ 103 (843)
..+++|+.|+|++|+|+ .+|..++++++|+.|++++|. +.+..|..++++++|+.|+ ++.|.+.
T Consensus 346 ~~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~~- 423 (567)
T 1dce_A 346 ATDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYLD- 423 (567)
T ss_dssp STTTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHHH-
T ss_pred ccCccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhcccc-
Confidence 45677777777777776 667777777777777776554 2334444555555555555 4444332
Q ss_pred CCCcccCCCCCCcEEEcCCCCCCCCCCCccccCCCCCcEEEcCCCCCCCCCCCCCCCCCCCEEEcccCcCCCCCCCCCCC
Q 003158 104 YLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLS 183 (843)
Q Consensus 104 ~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 183 (843)
.|+.+.+++|.+.. ++. ..|+.|+|++|.|++++. +..+++|+.|+|++|.|+ .+|..+..
T Consensus 424 ----------~L~~l~l~~n~i~~--l~~-----~~L~~L~Ls~n~l~~lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~ 484 (567)
T 1dce_A 424 ----------DLRSKFLLENSVLK--MEY-----ADVRVLHLAHKDLTVLCH-LEQLLLVTHLDLSHNRLR-ALPPALAA 484 (567)
T ss_dssp ----------HHHHHHHHHHHHHH--HHH-----TTCSEEECTTSCCSSCCC-GGGGTTCCEEECCSSCCC-CCCGGGGG
T ss_pred ----------hhhhhhhhcccccc--cCc-----cCceEEEecCCCCCCCcC-ccccccCcEeecCccccc-ccchhhhc
Confidence 34444555555542 221 259999999999999765 999999999999999999 78876554
Q ss_pred -cCcCEEEccCCcCCCCCCcccCCCCCCcEEeCcCccCCCCC-CchhhccccCCCCcceeEEcCCCCCCCCCCCC-----
Q 003158 184 -LNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSI-PSSIWQSRTLNATETFILDFQNNNLTNISGSF----- 256 (843)
Q Consensus 184 -~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~-p~~~~~l~~l~~~~L~~L~l~~N~l~~~~~~~----- 256 (843)
.+|+.|+|++|.|++ +| .|+++++|+.|+|++|+|++.. |..+..+.+ |+.|+|++|+|+++++..
T Consensus 485 l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~-----L~~L~L~~N~l~~~~~~~~~l~~ 557 (567)
T 1dce_A 485 LRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPR-----LVLLNLQGNSLCQEEGIQERLAE 557 (567)
T ss_dssp CTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTT-----CCEEECTTSGGGGSSSCTTHHHH
T ss_pred CCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCC-----CCEEEecCCcCCCCccHHHHHHH
Confidence 489999999999997 66 8999999999999999999887 999887655 558999999999987754
Q ss_pred cCCCCcEEEe
Q 003158 257 NIPPNVTVRL 266 (843)
Q Consensus 257 ~~~~l~~l~l 266 (843)
.+|+|+.|++
T Consensus 558 ~lp~L~~L~l 567 (567)
T 1dce_A 558 MLPSVSSILT 567 (567)
T ss_dssp HCTTCSEEEC
T ss_pred HCcccCccCC
Confidence 3788888754
No 370
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.69 E-value=3.7e-18 Score=204.25 Aligned_cols=161 Identities=19% Similarity=0.219 Sum_probs=122.5
Q ss_pred EccCCcCCccCccccCCCCCCcEEEcccCcCCccCccccccCCCCCEEEccCCccccCCCcccCCCCCCceeeccCCCCC
Q 003158 23 LLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLT 102 (843)
Q Consensus 23 ~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~ 102 (843)
+++.|.+. ..++.|..+++|+.|+|++|.+. .+|..+.++++|+.|+|++|.|+ .+|..|+++++|+.|+|++|+|+
T Consensus 207 ~~~~n~~~-~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~ 283 (727)
T 4b8c_D 207 DDIENRMV-MPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT 283 (727)
T ss_dssp ----------------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS
T ss_pred ccccccee-cChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC
Confidence 33444444 56888999999999999999999 77878889999999999999999 88999999999999999999999
Q ss_pred CCCCcccCCCCCCcEEEcCCCCCCCCCCCccccCCCCCcEEEcCCCCCCCCCCC-CCCCC-CCCEEEcccCcCCCCCCCC
Q 003158 103 GYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMPD-LSRIP-NLGYLDLSSNQLNGSIPPG 180 (843)
Q Consensus 103 ~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~-~L~~L~Ls~N~l~~~~p~~ 180 (843)
.+|..|.++++|++|+|++|.|+ .+|..|.++++|+.|+|++|.|++.++. +..+. .+..|+|++|.+++.+|.
T Consensus 284 -~lp~~~~~l~~L~~L~L~~N~l~--~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~- 359 (727)
T 4b8c_D 284 -SLPAELGSCFQLKYFYFFDNMVT--TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPH- 359 (727)
T ss_dssp -SCCSSGGGGTTCSEEECCSSCCC--CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCC-
T ss_pred -ccChhhcCCCCCCEEECCCCCCC--ccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCcc-
Confidence 77999999999999999999996 6788999999999999999999987774 33322 223578999999988876
Q ss_pred CCCcCcCEEEccCC
Q 003158 181 RLSLNITTIKLSNN 194 (843)
Q Consensus 181 ~~~~~L~~L~Ls~N 194 (843)
.|..|++++|
T Consensus 360 ----~l~~l~l~~n 369 (727)
T 4b8c_D 360 ----ERRFIEINTD 369 (727)
T ss_dssp ----C---------
T ss_pred ----ccceeEeecc
Confidence 5677888877
No 371
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.68 E-value=1.2e-16 Score=158.92 Aligned_cols=139 Identities=17% Similarity=0.279 Sum_probs=84.2
Q ss_pred cEEEcCCCCCCCCCCCccccCCCCCcEEEcCCCCCCCCCCCCCCCCCCCEEEcccCcCCCCCCCCCCCcCcCEEEccCCc
Q 003158 116 LILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLSLNITTIKLSNNK 195 (843)
Q Consensus 116 ~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~Ls~N~ 195 (843)
+.+++++|.+. .+|..+. ++|+.|+|++|+|+.++..+..+++|+.|+|++|.|+
T Consensus 13 ~~l~~~~~~l~--~ip~~~~--~~l~~L~L~~n~i~~ip~~~~~l~~L~~L~Ls~N~i~--------------------- 67 (193)
T 2wfh_A 13 TVVRCSNKGLK--VLPKGIP--RDVTELYLDGNQFTLVPKELSNYKHLTLIDLSNNRIS--------------------- 67 (193)
T ss_dssp TEEECTTSCCS--SCCSCCC--TTCCEEECCSSCCCSCCGGGGGCTTCCEEECCSSCCC---------------------
T ss_pred CEEEcCCCCCC--cCCCCCC--CCCCEEECCCCcCchhHHHhhcccCCCEEECCCCcCC---------------------
Confidence 45555666554 3444332 3555555555555544444555555555555555554
Q ss_pred CCCCCCcccCCCCCCcEEeCcCccCCCCCCchhhccccCCCCcceeEEcCCCCCCCCCCCC--cCCCCcEEEeccCcccc
Q 003158 196 LTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGSF--NIPPNVTVRLRGNPFCL 273 (843)
Q Consensus 196 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~l~~~~L~~L~l~~N~l~~~~~~~--~~~~l~~l~l~~Np~~c 273 (843)
+..+..|.++++|++|+|++|+|++..|..|..+. +|+.|+|++|+|+.++... .++++..|++++|||.|
T Consensus 68 --~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~-----~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C 140 (193)
T 2wfh_A 68 --TLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLK-----SLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYC 140 (193)
T ss_dssp --CCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCT-----TCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred --EeCHhHccCCCCCCEEECCCCccCEeCHHHhCCCC-----CCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeec
Confidence 44445555566666666666666555555554433 3335666666666665542 57788899999999999
Q ss_pred cCCcccccCCCCC
Q 003158 274 NTNAEQFCGSHSD 286 (843)
Q Consensus 274 ~~~~~~~~~~~~~ 286 (843)
+|.+.||..|+..
T Consensus 141 ~c~l~~l~~~~~~ 153 (193)
T 2wfh_A 141 DCNMQWLSDWVKS 153 (193)
T ss_dssp SGGGHHHHHHHHH
T ss_pred CCcCHHHHHHHHh
Confidence 9999999988753
No 372
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.67 E-value=6.7e-17 Score=160.76 Aligned_cols=127 Identities=17% Similarity=0.312 Sum_probs=57.8
Q ss_pred CEEEccCCcCCccCccccCCCCCCcEEEcccCcCCccCcc-ccccCCCCCEEEccCCccccCCCcccCCCCCCceeeccC
Q 003158 20 ELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPK-SFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDN 98 (843)
Q Consensus 20 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~-~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~ 98 (843)
+.|++++|+++ .+|..+.. +|++|+|++|+|++..+. .|..+++|++|+|++|+|++..|..|.++++|++|+|++
T Consensus 11 ~~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 45555555554 34443322 455555555555533332 244455555555555555444444444444444444444
Q ss_pred CCCCCCCCcccCCCCCCcEEEcCCCCCCCCCCCccccCCCCCcEEEcCCCCC
Q 003158 99 NNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSL 150 (843)
Q Consensus 99 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l 150 (843)
|+|++..+..|.++++|++|+|++|++++ ..|..|..+++|+.|+|++|.+
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~-~~~~~~~~l~~L~~L~L~~N~l 138 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISC-VMPGSFEHLNSLTSLNLASNPF 138 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCE-ECTTSSTTCTTCCEEECTTCCB
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCe-eCHHHhhcCCCCCEEEeCCCCc
Confidence 44444444444444444444444444433 2233333333333333333333
No 373
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.67 E-value=1.6e-16 Score=154.24 Aligned_cols=136 Identities=21% Similarity=0.313 Sum_probs=86.7
Q ss_pred CCCcEEEcccCcCC-ccCccccccCCCCCEEEccCCccccCCCcccCCCCCCceeeccCCCCCCCCCcccCCCCCCcEEE
Q 003158 41 PKLDRIQIDQNYIS-GSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQ 119 (843)
Q Consensus 41 ~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 119 (843)
++|++|+|++|.++ +.+|..+..+++|+.|+|++|.|++. ..+..+++|++|+|++|++++.+|..+..+++|++|+
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 101 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLN 101 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEE
T ss_pred ccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEe
Confidence 55666666666665 45555566666666666666666644 5566666666666666666655566666666777777
Q ss_pred cCCCCCCCCCCCccccCCCCCcEEEcCCCCCCCCCC----CCCCCCCCCEEEcccCcCCCCCCC
Q 003158 120 LDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMP----DLSRIPNLGYLDLSSNQLNGSIPP 179 (843)
Q Consensus 120 Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~----~~~~l~~L~~L~Ls~N~l~~~~p~ 179 (843)
|++|++++...+..+..+++|+.|+|++|.+++.++ .+..+++|+.|++++|.+. .+|.
T Consensus 102 Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~-~~~~ 164 (168)
T 2ell_A 102 LSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ-EAPD 164 (168)
T ss_dssp CBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC-BCCS
T ss_pred ccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh-hccc
Confidence 777766542222566667777777777777776665 3666777777777777766 4443
No 374
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.65 E-value=7.1e-16 Score=153.32 Aligned_cols=131 Identities=23% Similarity=0.368 Sum_probs=117.0
Q ss_pred cEEEcccCcCCccCccccccCCCCCEEEccCCccccCCCc-ccCCCCCCceeeccCCCCCCCCCcccCCCCCCcEEEcCC
Q 003158 44 DRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPP-ELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDN 122 (843)
Q Consensus 44 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~-~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~ 122 (843)
++|++++|+++ .+|..+.. +|+.|+|++|.|++..+. .|..+++|++|+|++|+|++..|..|.++++|++|+|++
T Consensus 11 ~~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 78999999998 67765543 899999999999977664 489999999999999999999899999999999999999
Q ss_pred CCCCCCCCCccccCCCCCcEEEcCCCCCCCCCC-CCCCCCCCCEEEcccCcCCCCCC
Q 003158 123 NNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMP-DLSRIPNLGYLDLSSNQLNGSIP 178 (843)
Q Consensus 123 N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~~~p 178 (843)
|+|++ ..+..|.++++|+.|+|++|+++++++ .+..+++|+.|+|++|.+++..+
T Consensus 88 N~l~~-~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 143 (192)
T 1w8a_A 88 NKIKE-ISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCH 143 (192)
T ss_dssp CCCCE-ECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGG
T ss_pred CcCCc-cCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCc
Confidence 99986 456779999999999999999999877 59999999999999999986554
No 375
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.65 E-value=1.1e-16 Score=173.53 Aligned_cols=139 Identities=17% Similarity=0.203 Sum_probs=99.6
Q ss_pred cCCCCCCcccccCCeeEEEEEeCCCcEEEEEEeccCCh--------------hhHHHH--------HHHHHHHHhccCCc
Q 003158 511 NNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSL--------------QGEKEF--------LTEIQFLSRLHHRN 568 (843)
Q Consensus 511 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~--------------~~~~~~--------~~E~~~l~~l~h~n 568 (843)
.-|++.+.||+|+||.||+|...+|+.||||+++.... ...... .+|...|.++.+..
T Consensus 95 ~iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~g 174 (397)
T 4gyi_A 95 DVYSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEG 174 (397)
T ss_dssp SCSEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CEEEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcC
Confidence 34888999999999999999998999999998753210 001122 34555555554433
Q ss_pred ccceeeeeecCCcEEEEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCC
Q 003158 569 LVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHK 648 (843)
Q Consensus 569 Iv~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~ 648 (843)
+....-+. ....+|||||++|++|.++.. ......++.|++.+|.|||+.| ||||||||.|||++++
T Consensus 175 v~vp~p~~--~~~~~LVME~i~G~~L~~l~~--------~~~~~~l~~qll~~l~~lH~~g---IVHrDLKp~NILl~~d 241 (397)
T 4gyi_A 175 FPVPEPIA--QSRHTIVMSLVDALPMRQVSS--------VPDPASLYADLIALILRLAKHG---LIHGDFNEFNILIREE 241 (397)
T ss_dssp CSCCCEEE--EETTEEEEECCSCEEGGGCCC--------CSCHHHHHHHHHHHHHHHHHTT---EECSCCSTTSEEEEEE
T ss_pred CCCCeeee--ccCceEEEEecCCccHhhhcc--------cHHHHHHHHHHHHHHHHHHHCC---CcCCCCCHHHEEEeCC
Confidence 32111111 123479999999988866532 1234568899999999999999 9999999999999887
Q ss_pred C----------cEEEeeccccccC
Q 003158 649 F----------TAKVADFGLSRLA 662 (843)
Q Consensus 649 ~----------~~kl~DfGla~~~ 662 (843)
+ .+.|+||+-+...
T Consensus 242 gd~~d~~~~~~~~~iID~~Q~V~~ 265 (397)
T 4gyi_A 242 KDAEDPSSITLTPIIIXFPQMVSM 265 (397)
T ss_dssp ECSSCTTSEEEEEEECCCTTCEET
T ss_pred CCcccccccccceEEEEeCCcccC
Confidence 6 3899999987654
No 376
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.64 E-value=3.8e-16 Score=151.65 Aligned_cols=138 Identities=18% Similarity=0.215 Sum_probs=124.3
Q ss_pred CCCCCCEEEccCCcCC-ccCccccCCCCCCcEEEcccCcCCccCccccccCCCCCEEEccCCccccCCCcccCCCCCCce
Q 003158 15 NIKSLELLLLNGNELT-GSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVH 93 (843)
Q Consensus 15 ~l~~L~~L~L~~n~l~-~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~ 93 (843)
..++|+.|+|++|+++ +.+|..+..+++|++|+|++|.+++. ..+..+++|+.|+|++|.+++.+|..+.++++|+.
T Consensus 22 ~~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 99 (168)
T 2ell_A 22 TPAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTH 99 (168)
T ss_dssp CTTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCE
T ss_pred CcccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCE
Confidence 3478999999999998 78899999999999999999999966 78999999999999999999878888888999999
Q ss_pred eeccCCCCCCCCC-cccCCCCCCcEEEcCCCCCCCCCCCc----cccCCCCCcEEEcCCCCCCCCCCC
Q 003158 94 MLLDNNNLTGYLP-PELSELPKLLILQLDNNNFEGTTIPA----SYSNMSKLLKLSLRNCSLQGPMPD 156 (843)
Q Consensus 94 L~L~~N~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~~~~----~~~~l~~L~~L~L~~N~l~~~~~~ 156 (843)
|+|++|+|++... ..+..+++|++|+|++|.+++ ++. .+..+++|+.|++++|.+...+.+
T Consensus 100 L~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~--~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~ 165 (168)
T 2ell_A 100 LNLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTN--LNDYRESVFKLLPQLTYLDGYDREDQEAPDS 165 (168)
T ss_dssp EECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGT--STTHHHHHHTTCSSCCEETTEETTSCBCCSS
T ss_pred EeccCCccCcchhHHHHhcCCCCCEEEeeCCcCcc--hHHHHHHHHHhCccCcEecCCCCChhhcccc
Confidence 9999999996532 789999999999999999985 454 789999999999999999887664
No 377
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.61 E-value=7.3e-18 Score=198.36 Aligned_cols=82 Identities=11% Similarity=0.076 Sum_probs=46.1
Q ss_pred CCCCCCEEEccCCcCCcc----CccccCCCCCCcEEEcccCcCC----ccCccccccCCCCCEEEccCCccccCCCcccC
Q 003158 15 NIKSLELLLLNGNELTGS----LPEELGYLPKLDRIQIDQNYIS----GSLPKSFANLNKTRHFHMNNNSISGQIPPELS 86 (843)
Q Consensus 15 ~l~~L~~L~L~~n~l~~~----~p~~~~~l~~L~~L~L~~N~l~----~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~ 86 (843)
++++|++|+|++|.+++. ++..+..+++|++|+|++|.++ +.++..+.++++|+.|+|++|.+.+ ++..+.
T Consensus 162 ~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~-l~~~~~ 240 (592)
T 3ogk_B 162 HCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILE-LVGFFK 240 (592)
T ss_dssp HCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGG-GHHHHH
T ss_pred hCCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHH-HHHHHh
Confidence 556777777777766544 3334445666666666666665 2233344556666666666666553 334444
Q ss_pred CCCCCceeecc
Q 003158 87 RLPSLVHMLLD 97 (843)
Q Consensus 87 ~l~~L~~L~L~ 97 (843)
.+++|+.|+++
T Consensus 241 ~~~~L~~L~l~ 251 (592)
T 3ogk_B 241 AAANLEEFCGG 251 (592)
T ss_dssp HCTTCCEEEEC
T ss_pred hhhHHHhhccc
Confidence 44444444444
No 378
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.61 E-value=4.3e-15 Score=147.69 Aligned_cols=107 Identities=22% Similarity=0.347 Sum_probs=59.1
Q ss_pred CCCEEEccCCccccCCCcccCCCCCCceeeccCCCCCCCCCcccCCCCCCcEEEcCCCCCCCCCCCccccCCCCCcEEEc
Q 003158 66 KTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSL 145 (843)
Q Consensus 66 ~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L 145 (843)
+|+.|+|++|.|+ .+|..|.++++|+.|+|++|+|++..+..|.++++|++|+|++|+|++ ..+..|.++++|+.|+|
T Consensus 32 ~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~l~~-i~~~~f~~l~~L~~L~L 109 (193)
T 2wfh_A 32 DVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRC-IPPRTFDGLKSLRLLSL 109 (193)
T ss_dssp TCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCB-CCTTTTTTCTTCCEEEC
T ss_pred CCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCccCE-eCHHHhCCCCCCCEEEC
Confidence 4555555555554 344445555555555555555554444555555555555555555543 23445555566666666
Q ss_pred CCCCCCCCCCC-CCCCCCCCEEEcccCcCC
Q 003158 146 RNCSLQGPMPD-LSRIPNLGYLDLSSNQLN 174 (843)
Q Consensus 146 ~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~ 174 (843)
++|+|+.+++. |..+++|+.|+|++|.+.
T Consensus 110 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 139 (193)
T 2wfh_A 110 HGNDISVVPEGAFNDLSALSHLAIGANPLY 139 (193)
T ss_dssp CSSCCCBCCTTTTTTCTTCCEEECCSSCEE
T ss_pred CCCCCCeeChhhhhcCccccEEEeCCCCee
Confidence 66666655553 556666666666666665
No 379
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.61 E-value=4.2e-16 Score=148.11 Aligned_cols=127 Identities=19% Similarity=0.259 Sum_probs=65.2
Q ss_pred CCCCEEEccCCcCC-ccCccccCCCCCCcEEEcccCcCCccCccccccCCCCCEEEccCCccccCCCcccCCCCCCceee
Q 003158 17 KSLELLLLNGNELT-GSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHML 95 (843)
Q Consensus 17 ~~L~~L~L~~n~l~-~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~ 95 (843)
++|+.|++++|.++ +.+|..+..+++|++|+|++|.+++. ..+..+++|+.|+|++|.+++.+|..+..+++|++|+
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 94 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLN 94 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEE
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEE
Confidence 45666666666665 45555555566666666666655533 4455555555555555555544444444455555555
Q ss_pred ccCCCCCCC-CCcccCCCCCCcEEEcCCCCCCCCCCC---ccccCCCCCcEEEcC
Q 003158 96 LDNNNLTGY-LPPELSELPKLLILQLDNNNFEGTTIP---ASYSNMSKLLKLSLR 146 (843)
Q Consensus 96 L~~N~l~~~-~~~~~~~l~~L~~L~Ls~N~l~~~~~~---~~~~~l~~L~~L~L~ 146 (843)
|++|++++. .+..+..+++|++|+|++|.+++ ..+ ..+..+++|+.|+++
T Consensus 95 ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~-~~~~~~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 95 LSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTN-LNDYRENVFKLLPQLTYLDGY 148 (149)
T ss_dssp CTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGG-STTHHHHHHHHCTTCCEETTB
T ss_pred CCCCcCCChHHHHHHhhCCCCCEEeCcCCcccc-hHHHHHHHHHHCCCcccccCC
Confidence 555555532 12444455555555555555542 111 234444455544443
No 380
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.60 E-value=5e-18 Score=199.73 Aligned_cols=264 Identities=14% Similarity=0.087 Sum_probs=163.1
Q ss_pred Ccccccc----CCccccCCCCCCEEEccCCcCC----ccCccccCCCCCCcEEEcccCcCCccCccccccCCCCCEEEcc
Q 003158 2 WNKISGS----IPKEIGNIKSLELLLLNGNELT----GSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMN 73 (843)
Q Consensus 2 ~N~i~~~----~p~~i~~l~~L~~L~L~~n~l~----~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls 73 (843)
+|.+++. ++..+.++++|+.|+|++|.++ +.++..+.++++|++|+|++|.+.+ ++..+.++++|+.|+++
T Consensus 173 ~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~ 251 (592)
T 3ogk_B 173 ESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILE-LVGFFKAAANLEEFCGG 251 (592)
T ss_dssp TCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGG-GHHHHHHCTTCCEEEEC
T ss_pred cccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHH-HHHHHhhhhHHHhhccc
Confidence 4556554 3344556788888888888887 3445556677888888888888774 45566666666666665
Q ss_pred CCcc--------------------------ccCCCcccCCCCCCceeeccCCCCCCCCC-cccCCCCCCcEEEcCCCCCC
Q 003158 74 NNSI--------------------------SGQIPPELSRLPSLVHMLLDNNNLTGYLP-PELSELPKLLILQLDNNNFE 126 (843)
Q Consensus 74 ~N~l--------------------------~~~~~~~l~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~Ls~N~l~ 126 (843)
.+.. ...+|..+..+++|++|+|++|.+++... ..+..+++|++|+|+ |.+.
T Consensus 252 ~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~l~~~~~~~~~L~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~-~~~~ 330 (592)
T 3ogk_B 252 SLNEDIGMPEKYMNLVFPRKLCRLGLSYMGPNEMPILFPFAAQIRKLDLLYALLETEDHCTLIQKCPNLEVLETR-NVIG 330 (592)
T ss_dssp BCCCCTTCTTSSSCCCCCTTCCEEEETTCCTTTGGGGGGGGGGCCEEEETTCCCCHHHHHHHHTTCTTCCEEEEE-GGGH
T ss_pred ccccccchHHHHHHhhccccccccCccccchhHHHHHHhhcCCCcEEecCCCcCCHHHHHHHHHhCcCCCEEecc-CccC
Confidence 3211 12345556678899999999998764332 335778888888888 4444
Q ss_pred CCCCCccccCCCCCcEEEcCC-----------CCCCCCCC-C-CCCCCCCCEEEcccCcCCCCCCCCCC--CcCcCEEEc
Q 003158 127 GTTIPASYSNMSKLLKLSLRN-----------CSLQGPMP-D-LSRIPNLGYLDLSSNQLNGSIPPGRL--SLNITTIKL 191 (843)
Q Consensus 127 ~~~~~~~~~~l~~L~~L~L~~-----------N~l~~~~~-~-~~~l~~L~~L~Ls~N~l~~~~p~~~~--~~~L~~L~L 191 (843)
+..++..+..+++|++|+|++ |.++.... . ...+++|+.|+++.|.+++..+.... ..+|+.|+|
T Consensus 331 ~~~l~~~~~~~~~L~~L~L~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l 410 (592)
T 3ogk_B 331 DRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRL 410 (592)
T ss_dssp HHHHHHHHHHCTTCCEEEEECCCCSSTTSSTTCCCCHHHHHHHHHHCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEE
T ss_pred HHHHHHHHHhCCCCCEEEeecCccccccccccCccCHHHHHHHHhhCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEE
Confidence 323444556778888888883 45543211 1 34567888888877777653332221 236778887
Q ss_pred c----CCcCCCC-----CCcccCCCCCCcEEeCcCc--cCCCCCCchhhccccCCCCcceeEEcCCCCCCCCC--CC-Cc
Q 003158 192 S----NNKLTGT-----IPSNFSGLPRLQRLFIANN--SLSGSIPSSIWQSRTLNATETFILDFQNNNLTNIS--GS-FN 257 (843)
Q Consensus 192 s----~N~l~~~-----~p~~~~~l~~L~~L~L~~N--~l~~~~p~~~~~l~~l~~~~L~~L~l~~N~l~~~~--~~-~~ 257 (843)
+ .|.+++. ++..+.++++|+.|+|++| .+++..+..+.. ..++|+.|+|++|++++.. .. ..
T Consensus 411 ~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~~~~----~~~~L~~L~L~~n~l~~~~~~~~~~~ 486 (592)
T 3ogk_B 411 VLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQ----YSPNVRWMLLGYVGESDEGLMEFSRG 486 (592)
T ss_dssp EECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHHHHHHHH----SCTTCCEEEECSCCSSHHHHHHHHTC
T ss_pred eecCCCccccCchHHHHHHHHHHhCCCCCEEEEecCCCCccHHHHHHHHH----hCccceEeeccCCCCCHHHHHHHHhc
Confidence 5 6677653 3333556777777777642 355444433332 1245667777777766422 11 14
Q ss_pred CCCCcEEEeccCcc
Q 003158 258 IPPNVTVRLRGNPF 271 (843)
Q Consensus 258 ~~~l~~l~l~~Np~ 271 (843)
+++|+.|++++|++
T Consensus 487 ~~~L~~L~l~~n~l 500 (592)
T 3ogk_B 487 CPNLQKLEMRGCCF 500 (592)
T ss_dssp CTTCCEEEEESCCC
T ss_pred CcccCeeeccCCCC
Confidence 66777777777764
No 381
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.59 E-value=8.5e-16 Score=145.95 Aligned_cols=130 Identities=20% Similarity=0.300 Sum_probs=117.5
Q ss_pred CCCCCcEEEcccCcCC-ccCccccccCCCCCEEEccCCccccCCCcccCCCCCCceeeccCCCCCCCCCcccCCCCCCcE
Q 003158 39 YLPKLDRIQIDQNYIS-GSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLI 117 (843)
Q Consensus 39 ~l~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 117 (843)
..++|++|++++|.++ +.+|..+..+++|+.|++++|.+++. ..+..+++|+.|+|++|++++.+|..+..+++|++
T Consensus 15 ~~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~ 92 (149)
T 2je0_A 15 TPSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTH 92 (149)
T ss_dssp CGGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCE
T ss_pred CCccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCE
Confidence 3478999999999998 78888999999999999999999966 78999999999999999999878888888999999
Q ss_pred EEcCCCCCCCCCCCccccCCCCCcEEEcCCCCCCCCCC----CCCCCCCCCEEEccc
Q 003158 118 LQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMP----DLSRIPNLGYLDLSS 170 (843)
Q Consensus 118 L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~----~~~~l~~L~~L~Ls~ 170 (843)
|+|++|++++...+..+..+++|+.|++++|.+++.++ .+..+++|+.|++++
T Consensus 93 L~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~d 149 (149)
T 2je0_A 93 LNLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGYD 149 (149)
T ss_dssp EECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTBC
T ss_pred EECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCCC
Confidence 99999999753334789999999999999999999887 488899999999874
No 382
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.59 E-value=1.6e-14 Score=141.51 Aligned_cols=131 Identities=19% Similarity=0.325 Sum_probs=80.3
Q ss_pred cEEEcccCcCCccCccccccCCCCCEEEccCCccccCCCcccCCCCCCceeeccCCCCCCCCCcccCCCCCCcEEEcCCC
Q 003158 44 DRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNN 123 (843)
Q Consensus 44 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N 123 (843)
+.+++++|+++ .+|..+ .++|+.|+|++|++++..+..|..+++|++|+|++|+|++..+..|..+++|++|+|++|
T Consensus 10 ~~l~~~~~~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N 86 (177)
T 2o6r_A 10 TEIRCNSKGLT-SVPTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHEN 86 (177)
T ss_dssp TEEECCSSCCS-SCCTTC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEecCCCCc-cCCCCC--CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCC
Confidence 45555555555 333222 245666666666666554555566666666666666666555555666666666666666
Q ss_pred CCCCCCCCccccCCCCCcEEEcCCCCCCCCCCC-CCCCCCCCEEEcccCcCCCCCC
Q 003158 124 NFEGTTIPASYSNMSKLLKLSLRNCSLQGPMPD-LSRIPNLGYLDLSSNQLNGSIP 178 (843)
Q Consensus 124 ~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p 178 (843)
++++ ..+..+..+++|+.|+|++|+++++++. +..+++|+.|+|++|.+.+..|
T Consensus 87 ~l~~-~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 87 KLQS-LPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp CCCC-CCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred Cccc-cCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 6654 2344456667777777777777766664 5667777777777777765433
No 383
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.58 E-value=5.3e-16 Score=168.22 Aligned_cols=239 Identities=18% Similarity=0.201 Sum_probs=132.9
Q ss_pred CCCCCEEEccCCcCCccCccccCC-CCCCcEEEcccCcCC--------------------ccCcccccc--------CCC
Q 003158 16 IKSLELLLLNGNELTGSLPEELGY-LPKLDRIQIDQNYIS--------------------GSLPKSFAN--------LNK 66 (843)
Q Consensus 16 l~~L~~L~L~~n~l~~~~p~~~~~-l~~L~~L~L~~N~l~--------------------~~~~~~~~~--------l~~ 66 (843)
+.+|+.|.++++ +....-..+.. +++|+.|||++|+|. .+....|.+ +++
T Consensus 24 ~~~l~~L~l~g~-i~~~~~~~l~~~l~~L~~LdLs~n~i~~~~~~~~~~~~~~~~~~~~~~I~~~aF~~~~~~~~~g~~~ 102 (329)
T 3sb4_A 24 ANSITHLTLTGK-LNAEDFRHLRDEFPSLKVLDISNAEIKMYSGKAGTYPNGKFYIYMANFVPAYAFSNVVNGVTKGKQT 102 (329)
T ss_dssp HHHCSEEEEEEE-ECHHHHHHHHHSCTTCCEEEEEEEEECCEEESSSSSGGGCCEEECTTEECTTTTEEEETTEEEECTT
T ss_pred hCceeEEEEecc-ccHHHHHHHHHhhccCeEEecCcceeEEecCccccccccccccccccccCHHHhcccccccccccCC
Confidence 456777777654 22111122223 666777777777776 122344555 666
Q ss_pred CCEEEccCCccccCCCcccCCCCCCceeeccCCCCCCCCCcccCCCCCCcEEEcCCCCC----CCCCCCccccCCCCCc-
Q 003158 67 TRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNF----EGTTIPASYSNMSKLL- 141 (843)
Q Consensus 67 L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l----~~~~~~~~~~~l~~L~- 141 (843)
|+.|+|.+ .++.+.+.+|.++++|+.|+|++|.+..+.+.+|.++.++..|.+..+.. .. .....|.++.+|+
T Consensus 103 L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~-i~~~~f~~~~~L~~ 180 (329)
T 3sb4_A 103 LEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNR-WEHFAFIEGEPLET 180 (329)
T ss_dssp CCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTT-TTTSCEEESCCCEE
T ss_pred CcEEECCc-cccchhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhcccc-ccccccccccccce
Confidence 66666666 66655556666666666666666666655556666665555555544211 10 0112233333333
Q ss_pred EEEcCCCCC---------------C-----CCCC-----CC-CCCCCCCEEEcccCcCCCCCCCCCCCc--CcCEEEccC
Q 003158 142 KLSLRNCSL---------------Q-----GPMP-----DL-SRIPNLGYLDLSSNQLNGSIPPGRLSL--NITTIKLSN 193 (843)
Q Consensus 142 ~L~L~~N~l---------------~-----~~~~-----~~-~~l~~L~~L~Ls~N~l~~~~p~~~~~~--~L~~L~Ls~ 193 (843)
.+.+....- . +... .+ ..+++|+.|+|++|+++ .|+...+.. +|+.|+|++
T Consensus 181 ~i~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~~~~~L~~l~L~~n~i~-~I~~~aF~~~~~L~~l~l~~ 259 (329)
T 3sb4_A 181 TIQVGAMGKLEDEIMKAGLQPRDINFLTIEGKLDNADFKLIRDYMPNLVSLDISKTNAT-TIPDFTFAQKKYLLKIKLPH 259 (329)
T ss_dssp EEEECTTCCHHHHHHHTTCCGGGCSEEEEEECCCHHHHHHHHHHCTTCCEEECTTBCCC-EECTTTTTTCTTCCEEECCT
T ss_pred eEEecCCCcHHHHHhhcccCccccceEEEeeeecHHHHHHHHHhcCCCeEEECCCCCcc-eecHhhhhCCCCCCEEECCc
Confidence 222211000 0 0000 00 02567777777777777 666654432 677777777
Q ss_pred CcCCCCCCcccCCCCCCc-EEeCcCccCCCCCCchhhccccCCCCcceeEEcCCCCCCCCCCCC--cCCCCcEEE
Q 003158 194 NKLTGTIPSNFSGLPRLQ-RLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGSF--NIPPNVTVR 265 (843)
Q Consensus 194 N~l~~~~p~~~~~l~~L~-~L~L~~N~l~~~~p~~~~~l~~l~~~~L~~L~l~~N~l~~~~~~~--~~~~l~~l~ 265 (843)
| ++.+.+.+|.++++|+ .|++.+ .++...+.+|..+. +|+.|++++|+++.++... ++++|+.++
T Consensus 260 n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~-----~L~~l~l~~n~i~~I~~~aF~~~~~L~~ly 327 (329)
T 3sb4_A 260 N-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCD-----NLRYVLATGDKITTLGDELFGNGVPSKLIY 327 (329)
T ss_dssp T-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCT-----TEEEEEECSSCCCEECTTTTCTTCCCCEEE
T ss_pred c-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCc-----cCCEEEeCCCccCccchhhhcCCcchhhhc
Confidence 7 6666677777777777 777777 66645556665543 4457777777777776643 566666654
No 384
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.58 E-value=1.7e-14 Score=141.19 Aligned_cols=126 Identities=23% Similarity=0.333 Sum_probs=60.3
Q ss_pred CEEEccCCccccCCCcccCCCCCCceeeccCCCCCCCCCcccCCCCCCcEEEcCCCCCCCCCCCccccCCCCCcEEEcCC
Q 003158 68 RHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRN 147 (843)
Q Consensus 68 ~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~ 147 (843)
+.+++++|+++ .+|..+ .++|+.|+|++|++++..+..|..+++|++|+|++|++++ ..+..|.++++|+.|+|++
T Consensus 10 ~~l~~~~~~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~-~~~~~~~~l~~L~~L~l~~ 85 (177)
T 2o6r_A 10 TEIRCNSKGLT-SVPTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQS-LPDGVFDKLTKLTILYLHE 85 (177)
T ss_dssp TEEECCSSCCS-SCCTTC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCC-CCTTTTTTCTTCCEEECCS
T ss_pred CEEEecCCCCc-cCCCCC--CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceE-eChhHccCCCccCEEECCC
Confidence 44555555554 223222 1355555555555554444444555555555555555543 2233345555555555555
Q ss_pred CCCCCCCCC-CCCCCCCCEEEcccCcCCCCCCCCC-C-CcCcCEEEccCCcCCC
Q 003158 148 CSLQGPMPD-LSRIPNLGYLDLSSNQLNGSIPPGR-L-SLNITTIKLSNNKLTG 198 (843)
Q Consensus 148 N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~~-~-~~~L~~L~Ls~N~l~~ 198 (843)
|+++++++. +..+++|+.|+|++|.++ .+|... . ..+|+.|+|++|.+++
T Consensus 86 N~l~~~~~~~~~~l~~L~~L~l~~N~l~-~~~~~~~~~l~~L~~L~l~~N~~~~ 138 (177)
T 2o6r_A 86 NKLQSLPNGVFDKLTQLKELALDTNQLK-SVPDGIFDRLTSLQKIWLHTNPWDC 138 (177)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCS-CCCTTTTTTCTTCCEEECCSSCBCC
T ss_pred CCccccCHHHhhCCcccCEEECcCCcce-EeCHHHhcCCcccCEEEecCCCeec
Confidence 555554443 445555555555555555 233222 1 1245555555555543
No 385
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.57 E-value=4.2e-15 Score=161.09 Aligned_cols=216 Identities=13% Similarity=0.147 Sum_probs=164.6
Q ss_pred CCCCCEEEccCCcCC--------------------ccCccccCC--------CCCCcEEEcccCcCCccCccccccCCCC
Q 003158 16 IKSLELLLLNGNELT--------------------GSLPEELGY--------LPKLDRIQIDQNYISGSLPKSFANLNKT 67 (843)
Q Consensus 16 l~~L~~L~L~~n~l~--------------------~~~p~~~~~--------l~~L~~L~L~~N~l~~~~~~~~~~l~~L 67 (843)
+++|+.|||++|++. .+...+|.+ +++|++|+|.+ .++.+....|.++++|
T Consensus 48 l~~L~~LdLs~n~i~~~~~~~~~~~~~~~~~~~~~~I~~~aF~~~~~~~~~g~~~L~~l~L~~-~i~~I~~~aF~~~~~L 126 (329)
T 3sb4_A 48 FPSLKVLDISNAEIKMYSGKAGTYPNGKFYIYMANFVPAYAFSNVVNGVTKGKQTLEKVILSE-KIKNIEDAAFKGCDNL 126 (329)
T ss_dssp CTTCCEEEEEEEEECCEEESSSSSGGGCCEEECTTEECTTTTEEEETTEEEECTTCCC-CBCT-TCCEECTTTTTTCTTC
T ss_pred hccCeEEecCcceeEEecCccccccccccccccccccCHHHhcccccccccccCCCcEEECCc-cccchhHHHhhcCccc
Confidence 678999999999998 344567778 99999999999 8887888899999999
Q ss_pred CEEEccCCccccCCCcccCCCCCCceeeccCCC----CCCCCCcccCCCCCCc-EEEcCCCCC-----------------
Q 003158 68 RHFHMNNNSISGQIPPELSRLPSLVHMLLDNNN----LTGYLPPELSELPKLL-ILQLDNNNF----------------- 125 (843)
Q Consensus 68 ~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~----l~~~~~~~~~~l~~L~-~L~Ls~N~l----------------- 125 (843)
+.|+|++|.+..+.+.+|.++.++..+.+..+. ........|.++..|+ .+.+.....
T Consensus 127 ~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~~L~~~i~~~~~~~l~~~~~~~~~~~~~~~~ 206 (329)
T 3sb4_A 127 KICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGEPLETTIQVGAMGKLEDEIMKAGLQPRDINF 206 (329)
T ss_dssp CEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESCCCEEEEEECTTCCHHHHHHHTTCCGGGCSE
T ss_pred ceEEcCCCCccccchhhhcCCCceEEecCcchhhhhccccccccccccccccceeEEecCCCcHHHHHhhcccCccccce
Confidence 999999999988888999998888888777632 2333444565666666 444432110
Q ss_pred -------CCCCCCccccCCCCCcEEEcCCCCCCCCCCC-CCCCCCCCEEEcccCcCCCCCCCCCCCc--CcC-EEEccCC
Q 003158 126 -------EGTTIPASYSNMSKLLKLSLRNCSLQGPMPD-LSRIPNLGYLDLSSNQLNGSIPPGRLSL--NIT-TIKLSNN 194 (843)
Q Consensus 126 -------~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~~~~~--~L~-~L~Ls~N 194 (843)
...........+++|+.|+|++|+++.++.. |.++.+|+.|+|++| ++ .|+...+.. +|+ .|+|.+
T Consensus 207 l~~~~~l~~~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~-~I~~~aF~~~~~L~~~l~l~~- 283 (329)
T 3sb4_A 207 LTIEGKLDNADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LK-TIGQRVFSNCGRLAGTLELPA- 283 (329)
T ss_dssp EEEEECCCHHHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CC-EECTTTTTTCTTCCEEEEECT-
T ss_pred EEEeeeecHHHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cc-eehHHHhhCChhccEEEEEcc-
Confidence 0000000011378999999999999988884 999999999999998 76 677765543 698 999988
Q ss_pred cCCCCCCcccCCCCCCcEEeCcCccCCCCCCchhhccccCC
Q 003158 195 KLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLN 235 (843)
Q Consensus 195 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~l~ 235 (843)
.++.+.+.+|.++++|+.|++++|.++...+.+|.++.+|+
T Consensus 284 ~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~~L~ 324 (329)
T 3sb4_A 284 SVTAIEFGAFMGCDNLRYVLATGDKITTLGDELFGNGVPSK 324 (329)
T ss_dssp TCCEECTTTTTTCTTEEEEEECSSCCCEECTTTTCTTCCCC
T ss_pred cceEEchhhhhCCccCCEEEeCCCccCccchhhhcCCcchh
Confidence 77778889999999999999999999877777887766554
No 386
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.54 E-value=1.7e-13 Score=152.03 Aligned_cols=250 Identities=11% Similarity=0.122 Sum_probs=188.9
Q ss_pred ccccccCCccccCCCCCCEEEccCCcCCccCccccCCCCCCcEEEcccCcCCccCccccccCCCCCEEEccCCccccCCC
Q 003158 3 NKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIP 82 (843)
Q Consensus 3 N~i~~~~p~~i~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~ 82 (843)
|+++.+-..+|.+. +|+.+.|.++ ++.+...+|.+. +|+.+.|.+ .++.+....|.++++|+.++|++|.++.+..
T Consensus 122 ~~i~~I~~~aF~~~-~L~~i~l~~~-i~~I~~~aF~~~-~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~n~l~~I~~ 197 (401)
T 4fdw_A 122 NSVKSIPKDAFRNS-QIAKVVLNEG-LKSIGDMAFFNS-TVQEIVFPS-TLEQLKEDIFYYCYNLKKADLSKTKITKLPA 197 (401)
T ss_dssp TTCCEECTTTTTTC-CCSEEECCTT-CCEECTTTTTTC-CCCEEECCT-TCCEECSSTTTTCTTCCEEECTTSCCSEECT
T ss_pred CccCEehHhhcccC-CccEEEeCCC-ccEECHHhcCCC-CceEEEeCC-CccEehHHHhhCcccCCeeecCCCcceEech
Confidence 45565566677774 7999999877 776777888884 799999986 6776777889999999999999999986666
Q ss_pred cccCCCCCCceeeccCCCCCCCCCcccCCCCCCcEEEcCCCCCCCCCCCccccCCCCCcEEEcCCCCCCCCCC-CCCCCC
Q 003158 83 PELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMP-DLSRIP 161 (843)
Q Consensus 83 ~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~l~ 161 (843)
.+|. +.+|+.+.|.++ ++.+...+|.++++|+.|+|..| +.. .....|.+ .+|+.+.| .|.++.+.. .|..++
T Consensus 198 ~aF~-~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~-I~~~aF~~-~~L~~i~l-p~~i~~I~~~aF~~c~ 271 (401)
T 4fdw_A 198 STFV-YAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPEN-VST-IGQEAFRE-SGITTVKL-PNGVTNIASRAFYYCP 271 (401)
T ss_dssp TTTT-TCCCSEEECCTT-CCEECTTTTTTCTTCCCEECCTT-CCE-ECTTTTTT-CCCSEEEE-ETTCCEECTTTTTTCT
T ss_pred hhEe-ecccCEEEeCCc-hheehhhHhhCCCCCCEEecCCC-ccC-cccccccc-CCccEEEe-CCCccEEChhHhhCCC
Confidence 6676 589999999854 77677788999999999999875 432 23456766 78999999 456776766 589999
Q ss_pred CCCEEEcccCcCCC----CCCCCCCC--cCcCEEEccCCcCCCCCCcccCCCCCCcEEeCcCccCCCCCCchhhccccCC
Q 003158 162 NLGYLDLSSNQLNG----SIPPGRLS--LNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLN 235 (843)
Q Consensus 162 ~L~~L~Ls~N~l~~----~~p~~~~~--~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~l~ 235 (843)
+|+.+++.+|.+.. .++...+. .+|+.++|. |.++.+...+|.++++|+.|+|.+| ++.....+|..+
T Consensus 272 ~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~~L~~l~lp~~-l~~I~~~aF~~~---- 345 (401)
T 4fdw_A 272 ELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIP-ESIRILGQGLLGGNRKVTQLTIPAN-VTQINFSAFNNT---- 345 (401)
T ss_dssp TCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCC-TTCCEECTTTTTTCCSCCEEEECTT-CCEECTTSSSSS----
T ss_pred CCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeC-CceEEEhhhhhcCCCCccEEEECcc-ccEEcHHhCCCC----
Confidence 99999999887741 25554443 389999998 4577777889999999999999655 664555666554
Q ss_pred CCcceeEEcCCCCCCCCCCCC--cCC-CCcEEEeccCc
Q 003158 236 ATETFILDFQNNNLTNISGSF--NIP-PNVTVRLRGNP 270 (843)
Q Consensus 236 ~~~L~~L~l~~N~l~~~~~~~--~~~-~l~~l~l~~Np 270 (843)
+|+.|++++|.+..++... .++ .+..|++..|.
T Consensus 346 --~L~~l~l~~n~~~~l~~~~F~~~~~~l~~l~vp~~~ 381 (401)
T 4fdw_A 346 --GIKEVKVEGTTPPQVFEKVWYGFPDDITVIRVPAES 381 (401)
T ss_dssp --CCCEEEECCSSCCBCCCSSCCCSCTTCCEEEECGGG
T ss_pred --CCCEEEEcCCCCcccccccccCCCCCccEEEeCHHH
Confidence 4558999999888887654 453 56677776654
No 387
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.53 E-value=7.1e-15 Score=143.84 Aligned_cols=132 Identities=16% Similarity=0.203 Sum_probs=74.2
Q ss_pred cCCCCCCcEEEcccCcCCccCccccccCC-CCCEEEccCCccccCCCcccCCCCCCceeeccCCCCCCCCCcccCCCCCC
Q 003158 37 LGYLPKLDRIQIDQNYISGSLPKSFANLN-KTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKL 115 (843)
Q Consensus 37 ~~~l~~L~~L~L~~N~l~~~~~~~~~~l~-~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 115 (843)
+.++++|++|+|++|+++. ++. +..+. +|+.|+|++|.|++. ..|..+++|++|+|++|+|++..+..+..+++|
T Consensus 15 ~~~~~~L~~L~l~~n~l~~-i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 90 (176)
T 1a9n_A 15 YTNAVRDRELDLRGYKIPV-IEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDL 90 (176)
T ss_dssp EECTTSCEEEECTTSCCCS-CCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTC
T ss_pred cCCcCCceEEEeeCCCCch-hHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCC
Confidence 4445555555555555552 232 33332 566666666666543 445566666666666666664433444566666
Q ss_pred cEEEcCCCCCCCCCCCc--cccCCCCCcEEEcCCCCCCCCCCC----CCCCCCCCEEEcccCcCC
Q 003158 116 LILQLDNNNFEGTTIPA--SYSNMSKLLKLSLRNCSLQGPMPD----LSRIPNLGYLDLSSNQLN 174 (843)
Q Consensus 116 ~~L~Ls~N~l~~~~~~~--~~~~l~~L~~L~L~~N~l~~~~~~----~~~l~~L~~L~Ls~N~l~ 174 (843)
++|+|++|++. .+|. .+..+++|+.|+|++|.++..+.. +..+++|+.||++.|.+.
T Consensus 91 ~~L~L~~N~i~--~~~~~~~l~~l~~L~~L~l~~N~i~~~~~~~~~~~~~l~~L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 91 TELILTNNSLV--ELGDLDPLASLKSLTYLCILRNPVTNKKHYRLYVIYKVPQVRVLDFQKVKLK 153 (176)
T ss_dssp CEEECCSCCCC--CGGGGGGGGGCTTCCEEECCSSGGGGSTTHHHHHHHHCTTCSEETTEECCHH
T ss_pred CEEECCCCcCC--cchhhHhhhcCCCCCEEEecCCCCCCcHhHHHHHHHHCCccceeCCCcCCHH
Confidence 66666666664 2343 556666666666666666655543 556666666666666553
No 388
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.52 E-value=2e-14 Score=139.67 Aligned_cols=122 Identities=23% Similarity=0.260 Sum_probs=87.0
Q ss_pred CCEEEcccCcCCCCCCCCCCCcCcCEEEccCCcCCCCCCcccCCCCCCcEEeCcCccCCCCCCchhhccccCCCCcceeE
Q 003158 163 LGYLDLSSNQLNGSIPPGRLSLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFIL 242 (843)
Q Consensus 163 L~~L~Ls~N~l~~~~p~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~l~~~~L~~L 242 (843)
.+.|++++|.++ .+|.... .+|+.|+|++|.|++..|..|.++++|++|+|++|+|++..+..|..+. +|+.|
T Consensus 11 ~~~l~~s~n~l~-~ip~~~~-~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~-----~L~~L 83 (170)
T 3g39_A 11 GTTVDCSGKSLA-SVPTGIP-TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLT-----QLTQL 83 (170)
T ss_dssp TTEEECTTSCCS-SCCSCCC-TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCT-----TCCEE
T ss_pred CCEEEeCCCCcC-ccCccCC-CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCC-----CCCEE
Confidence 455666666665 4554432 4677777777777777777777788888888888888765555554443 44578
Q ss_pred EcCCCCCCCCCCC-C-cCCCCcEEEeccCcccccCC-cccccCCCCCCCccc
Q 003158 243 DFQNNNLTNISGS-F-NIPPNVTVRLRGNPFCLNTN-AEQFCGSHSDDDNEI 291 (843)
Q Consensus 243 ~l~~N~l~~~~~~-~-~~~~l~~l~l~~Np~~c~~~-~~~~~~~~~~~~~~~ 291 (843)
+|++|+|++++.. + .+++|+.|+|++|||.|+|. +.++..|+......+
T Consensus 84 ~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~~l~~l~~~l~~~~~~~ 135 (170)
T 3g39_A 84 SLNDNQLKSIPRGAFDNLKSLTHIWLLNNPWDCACSDILYLSRWISQHPGLV 135 (170)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCTTBGGGHHHHHHHHHCGGGE
T ss_pred ECCCCccCEeCHHHhcCCCCCCEEEeCCCCCCCCchhHHHHHHHHHhCccee
Confidence 8888888887765 3 68889999999999999995 888888876655443
No 389
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.52 E-value=9.2e-15 Score=143.04 Aligned_cols=135 Identities=23% Similarity=0.255 Sum_probs=116.8
Q ss_pred ccccCCCCCCEEEccCCcCCccCccccCCCC-CCcEEEcccCcCCccCccccccCCCCCEEEccCCccccCCCcccCCCC
Q 003158 11 KEIGNIKSLELLLLNGNELTGSLPEELGYLP-KLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLP 89 (843)
Q Consensus 11 ~~i~~l~~L~~L~L~~n~l~~~~p~~~~~l~-~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~ 89 (843)
..+.++.+|+.|+|++|+++. ++. +..+. +|++|+|++|.|++. ..|..+++|+.|+|++|.|++..+..|..++
T Consensus 13 ~~~~~~~~L~~L~l~~n~l~~-i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 88 (176)
T 1a9n_A 13 AQYTNAVRDRELDLRGYKIPV-IEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALP 88 (176)
T ss_dssp CEEECTTSCEEEECTTSCCCS-CCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCT
T ss_pred HhcCCcCCceEEEeeCCCCch-hHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCC
Confidence 356788999999999999994 555 55554 999999999999965 6799999999999999999976556668999
Q ss_pred CCceeeccCCCCCCCCCc--ccCCCCCCcEEEcCCCCCCCCCCCcc----ccCCCCCcEEEcCCCCCCC
Q 003158 90 SLVHMLLDNNNLTGYLPP--ELSELPKLLILQLDNNNFEGTTIPAS----YSNMSKLLKLSLRNCSLQG 152 (843)
Q Consensus 90 ~L~~L~L~~N~l~~~~~~--~~~~l~~L~~L~Ls~N~l~~~~~~~~----~~~l~~L~~L~L~~N~l~~ 152 (843)
+|+.|+|++|+|+ .+|. .+..+++|+.|+|++|.+. .+|.. +..+++|+.|++++|.+..
T Consensus 89 ~L~~L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~--~~~~~~~~~~~~l~~L~~Ld~~~n~~~~ 154 (176)
T 1a9n_A 89 DLTELILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVT--NKKHYRLYVIYKVPQVRVLDFQKVKLKE 154 (176)
T ss_dssp TCCEEECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGG--GSTTHHHHHHHHCTTCSEETTEECCHHH
T ss_pred CCCEEECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCC--CcHhHHHHHHHHCCccceeCCCcCCHHH
Confidence 9999999999997 4555 7899999999999999997 45664 8999999999999998764
No 390
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.49 E-value=3.7e-13 Score=149.29 Aligned_cols=233 Identities=10% Similarity=0.158 Sum_probs=188.0
Q ss_pred ccccccCCccccCCCCCCEEEccCCcCCccCccccCCCCCCcEEEcccCcCCccCccccccCCCCCEEEccCCccccCCC
Q 003158 3 NKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIP 82 (843)
Q Consensus 3 N~i~~~~p~~i~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~ 82 (843)
++++.+-..+|.+ .+|+.+.|.+ .++.+...+|.++++|+.++|++|+++.+....|. ..+|+.+.|.++ ++.+..
T Consensus 144 ~~i~~I~~~aF~~-~~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~n~l~~I~~~aF~-~~~L~~l~lp~~-l~~I~~ 219 (401)
T 4fdw_A 144 EGLKSIGDMAFFN-STVQEIVFPS-TLEQLKEDIFYYCYNLKKADLSKTKITKLPASTFV-YAGIEEVLLPVT-LKEIGS 219 (401)
T ss_dssp TTCCEECTTTTTT-CCCCEEECCT-TCCEECSSTTTTCTTCCEEECTTSCCSEECTTTTT-TCCCSEEECCTT-CCEECT
T ss_pred CCccEECHHhcCC-CCceEEEeCC-CccEehHHHhhCcccCCeeecCCCcceEechhhEe-ecccCEEEeCCc-hheehh
Confidence 4567667778877 4799999996 78878889999999999999999999966666666 689999999855 777888
Q ss_pred cccCCCCCCceeeccCCCCCCCCCcccCCCCCCcEEEcCCCCCCCCCCCccccCCCCCcEEEcCCCCCC-----CCCC-C
Q 003158 83 PELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQ-----GPMP-D 156 (843)
Q Consensus 83 ~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~-----~~~~-~ 156 (843)
.+|.++++|+.++|.+| ++.+...+|.+ .+|+.+.|. |.+.. .....|.+|++|+.+++.+|.+. .+.. .
T Consensus 220 ~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~lp-~~i~~-I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~a 295 (401)
T 4fdw_A 220 QAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKLP-NGVTN-IASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYC 295 (401)
T ss_dssp TTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEEE-TTCCE-ECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTT
T ss_pred hHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEeC-CCccE-EChhHhhCCCCCCEEEeCCccccCCcccEECHHH
Confidence 89999999999999975 66567778888 899999995 45542 34678999999999999998876 3444 4
Q ss_pred CCCCCCCCEEEcccCcCCCCCCCCCCC--cCcCEEEccCCcCCCCCCcccCCCCCCcEEeCcCccCCCCCCchhhccccC
Q 003158 157 LSRIPNLGYLDLSSNQLNGSIPPGRLS--LNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTL 234 (843)
Q Consensus 157 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~--~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~l 234 (843)
|.+|++|+.++|. |.++ .++...+. .+|+.|+|.+| ++.+...+|.++ +|+.|++++|.+....+..|..+..
T Consensus 296 F~~c~~L~~l~l~-~~i~-~I~~~aF~~c~~L~~l~lp~~-l~~I~~~aF~~~-~L~~l~l~~n~~~~l~~~~F~~~~~- 370 (401)
T 4fdw_A 296 LEGCPKLARFEIP-ESIR-ILGQGLLGGNRKVTQLTIPAN-VTQINFSAFNNT-GIKEVKVEGTTPPQVFEKVWYGFPD- 370 (401)
T ss_dssp TTTCTTCCEECCC-TTCC-EECTTTTTTCCSCCEEEECTT-CCEECTTSSSSS-CCCEEEECCSSCCBCCCSSCCCSCT-
T ss_pred hhCCccCCeEEeC-CceE-EEhhhhhcCCCCccEEEECcc-ccEEcHHhCCCC-CCCEEEEcCCCCcccccccccCCCC-
Confidence 9999999999999 5577 77776554 48999999665 777888999999 9999999999988666666655432
Q ss_pred CCCcceeEEcCCCCCCC
Q 003158 235 NATETFILDFQNNNLTN 251 (843)
Q Consensus 235 ~~~~L~~L~l~~N~l~~ 251 (843)
.+..|.+-.|.+..
T Consensus 371 ---~l~~l~vp~~~~~~ 384 (401)
T 4fdw_A 371 ---DITVIRVPAESVEK 384 (401)
T ss_dssp ---TCCEEEECGGGHHH
T ss_pred ---CccEEEeCHHHHHH
Confidence 45567777666543
No 391
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.48 E-value=9.4e-16 Score=180.36 Aligned_cols=86 Identities=14% Similarity=0.106 Sum_probs=43.4
Q ss_pred CCCCCCEEEccCCcCCccCccccC-CCCCCcEEEcccC-cCCcc-CccccccCCCCCEEEccCCccccCCCccc----CC
Q 003158 15 NIKSLELLLLNGNELTGSLPEELG-YLPKLDRIQIDQN-YISGS-LPKSFANLNKTRHFHMNNNSISGQIPPEL----SR 87 (843)
Q Consensus 15 ~l~~L~~L~L~~n~l~~~~p~~~~-~l~~L~~L~L~~N-~l~~~-~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l----~~ 87 (843)
.+++|++|+|++|.+++..+..+. .+++|++|+|++| .++.. ++..+.++++|++|+|++|.+++..+..+ ..
T Consensus 103 ~~~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~ 182 (594)
T 2p1m_B 103 SYTWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDT 182 (594)
T ss_dssp HCTTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTT
T ss_pred hCCCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhc
Confidence 445666666666665554444443 4556666666655 33321 22333355566666666655543332222 23
Q ss_pred CCCCceeeccCCC
Q 003158 88 LPSLVHMLLDNNN 100 (843)
Q Consensus 88 l~~L~~L~L~~N~ 100 (843)
+++|+.|+|++|.
T Consensus 183 ~~~L~~L~l~~~~ 195 (594)
T 2p1m_B 183 YTSLVSLNISCLA 195 (594)
T ss_dssp CCCCCEEECTTCC
T ss_pred CCcCcEEEecccC
Confidence 4455555555554
No 392
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.48 E-value=6.7e-14 Score=136.47 Aligned_cols=119 Identities=23% Similarity=0.314 Sum_probs=86.2
Q ss_pred CEEEcccCcCCCCCCCCCCCcCcCEEEccCCcCCCCCCcccCCCCCCcEEeCcCccCCCCCCchhhccccCCCCcceeEE
Q 003158 164 GYLDLSSNQLNGSIPPGRLSLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILD 243 (843)
Q Consensus 164 ~~L~Ls~N~l~~~~p~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~l~~~~L~~L~ 243 (843)
+.+++++|.++ .+|.... .+|+.|+|++|+|++..|..|.++++|++|+|++|+|++..+..|..+. +|+.|+
T Consensus 15 ~~l~~~~n~l~-~iP~~~~-~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~-----~L~~L~ 87 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP-TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLT-----QLTQLD 87 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC-TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCT-----TCCEEE
T ss_pred cEEEeCCCCCC-ccCCCcC-CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcc-----hhhEEE
Confidence 55666666665 5555433 4677777777777777777788888888888888888765444444443 455788
Q ss_pred cCCCCCCCCCCC-C-cCCCCcEEEeccCcccccCC-cccccCCCCCCCc
Q 003158 244 FQNNNLTNISGS-F-NIPPNVTVRLRGNPFCLNTN-AEQFCGSHSDDDN 289 (843)
Q Consensus 244 l~~N~l~~~~~~-~-~~~~l~~l~l~~Np~~c~~~-~~~~~~~~~~~~~ 289 (843)
|++|+|+.++.. + .++++..|+|++|||.|+|. +.++..|+.....
T Consensus 88 L~~N~l~~l~~~~~~~l~~L~~L~L~~N~~~c~~~~~~~l~~~~~~~~~ 136 (174)
T 2r9u_A 88 LNDNHLKSIPRGAFDNLKSLTHIYLYNNPWDCECRDIMYLRNWVADHTS 136 (174)
T ss_dssp CCSSCCCCCCTTTTTTCTTCSEEECCSSCBCTTBGGGHHHHHHHHHCGG
T ss_pred CCCCccceeCHHHhccccCCCEEEeCCCCcccccccHHHHHHHHHhccc
Confidence 888888888775 3 68899999999999999996 7777777755443
No 393
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.47 E-value=9.9e-17 Score=160.40 Aligned_cols=155 Identities=22% Similarity=0.304 Sum_probs=121.0
Q ss_pred ccCCCCCCEEEccCCcCCccCcc------ccCCCCCCcEEEcccCcCCccCccccccCCCCCEEEccCCccccCCCcccC
Q 003158 13 IGNIKSLELLLLNGNELTGSLPE------ELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELS 86 (843)
Q Consensus 13 i~~l~~L~~L~L~~n~l~~~~p~------~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~ 86 (843)
+.....++.++++.+.+.+..|. .|+.+++|++|+|++|.+++ +| .+..+++|+.|+|++|.|+ .+|..+.
T Consensus 14 ~~~~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~ 90 (198)
T 1ds9_A 14 FEERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDA 90 (198)
T ss_dssp HHHTTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHH
T ss_pred HHhcccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhh
Confidence 44556778888888888877776 88889999999999999885 56 7888899999999999988 6677777
Q ss_pred CCCCCceeeccCCCCCCCCCcccCCCCCCcEEEcCCCCCCCCCCCccccCCCCCcEEEcCCCCCCCCCCC----------
Q 003158 87 RLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMPD---------- 156 (843)
Q Consensus 87 ~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~---------- 156 (843)
.+++|+.|+|++|++++ +| .+..+++|++|+|++|++++......+..+++|+.|++++|.+.+.++.
T Consensus 91 ~~~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~ 168 (198)
T 1ds9_A 91 VADTLEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIE 168 (198)
T ss_dssp HHHHCSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHTTTTHHHHHHH
T ss_pred cCCcCCEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccccccccccchHHHHHH
Confidence 77889999999998885 34 6778888999999998886421113678888888888888888766443
Q ss_pred -CCCCCCCCEEEcccCcCC
Q 003158 157 -LSRIPNLGYLDLSSNQLN 174 (843)
Q Consensus 157 -~~~l~~L~~L~Ls~N~l~ 174 (843)
+..+++|+.|| +|.++
T Consensus 169 ~~~~l~~L~~Ld--~~~i~ 185 (198)
T 1ds9_A 169 VVKRLPNLKKLD--GMPVD 185 (198)
T ss_dssp HHHHCSSCSEEC--CGGGT
T ss_pred HHHhCCCcEEEC--CcccC
Confidence 66778888876 55554
No 394
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.46 E-value=9.3e-16 Score=180.38 Aligned_cols=179 Identities=17% Similarity=0.127 Sum_probs=92.3
Q ss_pred CCCCCceeeccCCCCCCCC-CcccCCCCCCcEEEcCCCCCCCCCCCccccCCCCCcEEEcCC---------CCCCCCCC-
Q 003158 87 RLPSLVHMLLDNNNLTGYL-PPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRN---------CSLQGPMP- 155 (843)
Q Consensus 87 ~l~~L~~L~L~~N~l~~~~-~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~---------N~l~~~~~- 155 (843)
.+++|+.|+|++|.+++.. ...+..+++|++|+|++| +.+..++.....+++|+.|+|.+ |.++....
T Consensus 287 ~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~~~~L~~L~L~~~~~~g~~~~~~l~~~~l~ 365 (594)
T 2p1m_B 287 VCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVLASTCKDLRELRVFPSEPFVMEPNVALTEQGLV 365 (594)
T ss_dssp HHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHHHHHCTTCCEEEEECSCTTCSSCSSCCCHHHHH
T ss_pred hhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHHHHhCCCCCEEEEecCcccccccCCCCCHHHHH
Confidence 4688999999999876432 223567888888888887 43212233334577788887733 33332111
Q ss_pred CC-CCCCCCCEEEcccCcCCCCCCCCCC--CcCcCEEEcc--C----CcCCCCC-----CcccCCCCCCcEEeCcCccCC
Q 003158 156 DL-SRIPNLGYLDLSSNQLNGSIPPGRL--SLNITTIKLS--N----NKLTGTI-----PSNFSGLPRLQRLFIANNSLS 221 (843)
Q Consensus 156 ~~-~~l~~L~~L~Ls~N~l~~~~p~~~~--~~~L~~L~Ls--~----N~l~~~~-----p~~~~~l~~L~~L~L~~N~l~ 221 (843)
.+ ..+++|+.|+++.|.+++....... ..+|+.|+|+ + |.++... +..+..+++|+.|+|++ .++
T Consensus 366 ~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~~~~~L~~L~L~~-~l~ 444 (594)
T 2p1m_B 366 SVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSG-LLT 444 (594)
T ss_dssp HHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCCCTHHHHHHHHHHCTTCCEEECCS-SCC
T ss_pred HHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCCchhhHHHHHHhhCCCccEEeecC-ccc
Confidence 11 2356666666666666532222111 2356666666 3 4444211 11144455666666654 444
Q ss_pred CCCCchhhccccCCCCcceeEEcCCCCCCCCCCC---CcCCCCcEEEeccCcc
Q 003158 222 GSIPSSIWQSRTLNATETFILDFQNNNLTNISGS---FNIPPNVTVRLRGNPF 271 (843)
Q Consensus 222 ~~~p~~~~~l~~l~~~~L~~L~l~~N~l~~~~~~---~~~~~l~~l~l~~Np~ 271 (843)
+..+..+.. ..++|+.|+|++|.+++.... ..+++|+.|++++|++
T Consensus 445 ~~~~~~l~~----~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~ 493 (594)
T 2p1m_B 445 DKVFEYIGT----YAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPF 493 (594)
T ss_dssp HHHHHHHHH----HCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSC
T ss_pred HHHHHHHHH----hchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCC
Confidence 333333322 122344566666555432211 1345555666665554
No 395
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.44 E-value=5.1e-13 Score=129.69 Aligned_cols=105 Identities=20% Similarity=0.291 Sum_probs=52.2
Q ss_pred CCEEEccCCcCCccCccccCCCCCCcEEEcccCcCCccCccccccCCCCCEEEccCCccccCCCcccCCCCCCceeeccC
Q 003158 19 LELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDN 98 (843)
Q Consensus 19 L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~ 98 (843)
.+.|++++|+|+ .+|..+. ++|++|+|++|+|++..|..|.++++|++|+|++|+|+++.+..|..+++|++|+|++
T Consensus 11 ~~~l~~s~n~l~-~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~ 87 (170)
T 3g39_A 11 GTTVDCSGKSLA-SVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLND 87 (170)
T ss_dssp TTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEeCCCCcC-ccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCC
Confidence 345555555555 3443332 4555555555555544444555555555555555555544444444555555555555
Q ss_pred CCCCCCCCcccCCCCCCcEEEcCCCCCC
Q 003158 99 NNLTGYLPPELSELPKLLILQLDNNNFE 126 (843)
Q Consensus 99 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 126 (843)
|+|++..+..|..+++|++|+|++|.+.
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 115 (170)
T 3g39_A 88 NQLKSIPRGAFDNLKSLTHIWLLNNPWD 115 (170)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCBC
T ss_pred CccCEeCHHHhcCCCCCCEEEeCCCCCC
Confidence 5555443444444445555555544443
No 396
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.41 E-value=9.9e-13 Score=128.13 Aligned_cols=103 Identities=21% Similarity=0.319 Sum_probs=48.5
Q ss_pred CEEEccCCcCCccCccccCCCCCCcEEEcccCcCCccCccccccCCCCCEEEccCCccccCCCcccCCCCCCceeeccCC
Q 003158 20 ELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNN 99 (843)
Q Consensus 20 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N 99 (843)
+.+++++|+++ .+|..+. ++|++|+|++|+|++..|..|.++++|+.|+|++|+|+++.+..|.++++|+.|+|++|
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 45555555554 3444332 44555555555555444444445555555555555554333333444444444444444
Q ss_pred CCCCCCCcccCCCCCCcEEEcCCCCC
Q 003158 100 NLTGYLPPELSELPKLLILQLDNNNF 125 (843)
Q Consensus 100 ~l~~~~~~~~~~l~~L~~L~Ls~N~l 125 (843)
+|++..+..|..+++|++|+|++|.+
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~~ 117 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNPW 117 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCB
T ss_pred ccceeCHHHhccccCCCEEEeCCCCc
Confidence 44433333344444444444444444
No 397
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.40 E-value=1.7e-15 Score=151.46 Aligned_cols=143 Identities=20% Similarity=0.301 Sum_probs=123.1
Q ss_pred CccccccCCc------cccCCCCCCEEEccCCcCCccCccccCCCCCCcEEEcccCcCCccCccccccCCCCCEEEccCC
Q 003158 2 WNKISGSIPK------EIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNN 75 (843)
Q Consensus 2 ~N~i~~~~p~------~i~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N 75 (843)
.|+++|.+|. .|..+++|++|+|++|++++ +| .+..+++|++|+|++|.++ .+|..+..+++|+.|+|++|
T Consensus 27 ~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~L~~L~L~~N 103 (198)
T 1ds9_A 27 KVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADTLEELWISYN 103 (198)
T ss_dssp EEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHHCSEEEEEEE
T ss_pred eeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCCcCCEEECcCC
Confidence 4677888777 89999999999999999996 66 8999999999999999999 67888888899999999999
Q ss_pred ccccCCCcccCCCCCCceeeccCCCCCCCCC-cccCCCCCCcEEEcCCCCCCCCCCCc----------cccCCCCCcEEE
Q 003158 76 SISGQIPPELSRLPSLVHMLLDNNNLTGYLP-PELSELPKLLILQLDNNNFEGTTIPA----------SYSNMSKLLKLS 144 (843)
Q Consensus 76 ~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~~~~----------~~~~l~~L~~L~ 144 (843)
+|++ +| .+..+++|+.|+|++|++++..+ ..+..+++|++|+|++|.+.+ ..|. .+..+++|+.|+
T Consensus 104 ~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~-~~~~~~~~~~~~~~~~~~l~~L~~Ld 180 (198)
T 1ds9_A 104 QIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYN-DYKENNATSEYRIEVVKRLPNLKKLD 180 (198)
T ss_dssp ECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHH-HHHTTTTHHHHHHHHHHHCSSCSEEC
T ss_pred cCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCcccc-ccccccchHHHHHHHHHhCCCcEEEC
Confidence 9996 44 68899999999999999995433 478999999999999999975 3333 378899999987
Q ss_pred cCCCCCCC
Q 003158 145 LRNCSLQG 152 (843)
Q Consensus 145 L~~N~l~~ 152 (843)
+|.++.
T Consensus 181 --~~~i~~ 186 (198)
T 1ds9_A 181 --GMPVDV 186 (198)
T ss_dssp --CGGGTT
T ss_pred --CcccCH
Confidence 666654
No 398
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.33 E-value=1.9e-12 Score=141.25 Aligned_cols=112 Identities=20% Similarity=0.231 Sum_probs=74.8
Q ss_pred CcCEEEccC-CcCCCCCCcccCCCCCCcEEeCcCccCCCCCCchhhccccCCCCcceeEEcCCCCCCCCCCCC-cCCCCc
Q 003158 185 NITTIKLSN-NKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGSF-NIPPNV 262 (843)
Q Consensus 185 ~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~l~~~~L~~L~l~~N~l~~~~~~~-~~~~l~ 262 (843)
+|+.|+|++ |.|++..+..|.++++|+.|+|++|+|++..|..|..+.+ |+.|+|++|+|+.++... ....|.
T Consensus 32 ~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~-----L~~L~l~~N~l~~~~~~~~~~~~L~ 106 (347)
T 2ifg_A 32 NLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPR-----LSRLNLSFNALESLSWKTVQGLSLQ 106 (347)
T ss_dssp CCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSC-----CCEEECCSSCCSCCCSTTTCSCCCC
T ss_pred CeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcC-----CCEEeCCCCccceeCHHHcccCCce
Confidence 455555553 5555555566777777777777777777666666655443 446777777777776544 333389
Q ss_pred EEEeccCcccccCCcccccCCCCCCCcccccCCCCCCCcCCC
Q 003158 263 TVRLRGNPFCLNTNAEQFCGSHSDDDNEIDRSTNSTLDCRAQ 304 (843)
Q Consensus 263 ~l~l~~Np~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~ 304 (843)
.|+|.+|+|.|+|.+.+|..|.......+ ....+.|.++
T Consensus 107 ~l~l~~N~~~c~c~l~~~~~~~~~~~~~l---~~~~~~C~~~ 145 (347)
T 2ifg_A 107 ELVLSGNPLHCSCALRWLQRWEEEGLGGV---PEQKLQCHGQ 145 (347)
T ss_dssp EEECCSSCCCCCGGGHHHHHHHHTTCSSC---GGGCCCCSSS
T ss_pred EEEeeCCCccCCCccHHHHHHHHhCcccc---cccCCCCCCC
Confidence 99999999999999999998876543322 2345667653
No 399
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.27 E-value=1.5e-11 Score=128.49 Aligned_cols=144 Identities=14% Similarity=0.088 Sum_probs=113.5
Q ss_pred HHcCCCCCCcccccCCeeEEEEEeCCCcEEEEEEeccCChhhHHHHHHHHHHHHhcc-CCcccceeeeeecCCcEEEEEe
Q 003158 509 ATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLH-HRNLVSLVGYCDEEGEQMLVYE 587 (843)
Q Consensus 509 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~nIv~l~~~~~~~~~~~lV~e 587 (843)
....|.....++.|+.+.||++... ++.+++|+...........+.+|+++++.+. +..+.++++++.+.+..++|||
T Consensus 12 ~l~~~~~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e 90 (263)
T 3tm0_A 12 LIEKYRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMS 90 (263)
T ss_dssp HHTTSEEEECCSCCSSSEEEEEECS-SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEE
T ss_pred HhccceeEeeccCCCCCeEEEEECC-CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEEE
Confidence 4457887888888999999999854 6889999987532222346888999999985 6778899999988889999999
Q ss_pred cCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcC---------------------------------------
Q 003158 588 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTE--------------------------------------- 628 (843)
Q Consensus 588 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~--------------------------------------- 628 (843)
|++|.+|.+.+. +......++.+++++|..||+.
T Consensus 91 ~i~G~~l~~~~~-------~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (263)
T 3tm0_A 91 EADGVLCSEEYE-------DEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTP 163 (263)
T ss_dssp CCSSEEHHHHCC-------TTTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTTCS
T ss_pred ecCCeehhhccC-------CcccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhcccccccccccccccc
Confidence 999999987641 1223446888999999999981
Q ss_pred -----------------CCCCEEeccCCCCcEEEcCCCcEEEeeccccc
Q 003158 629 -----------------ADPPVFHRDIKASNILLDHKFTAKVADFGLSR 660 (843)
Q Consensus 629 -----------------~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~ 660 (843)
..+.++|+|++|.||+++++..+.|+||+.+.
T Consensus 164 ~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T 3tm0_A 164 FKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp SSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred CCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence 11349999999999999876667799999775
No 400
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.23 E-value=8.9e-12 Score=135.89 Aligned_cols=105 Identities=19% Similarity=0.184 Sum_probs=84.2
Q ss_pred CEEEccCC-cCCccCccccCCCCCCcEEEccc-CcCCccCccccccCCCCCEEEccCCccccCCCcccCCCCCCceeecc
Q 003158 20 ELLLLNGN-ELTGSLPEELGYLPKLDRIQIDQ-NYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLD 97 (843)
Q Consensus 20 ~~L~L~~n-~l~~~~p~~~~~l~~L~~L~L~~-N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~ 97 (843)
..++++++ +|+ .+|. +..+++|++|+|++ |.|++..+..|.++++|+.|+|++|+|+++.|..|.++++|+.|+|+
T Consensus 11 ~~v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~ 88 (347)
T 2ifg_A 11 SGLRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLS 88 (347)
T ss_dssp SCEECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECC
T ss_pred CEEEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCC
Confidence 35688887 788 5677 88888888888886 88887777888888888888888888888888888888888888888
Q ss_pred CCCCCCCCCcccCCCCCCcEEEcCCCCCCC
Q 003158 98 NNNLTGYLPPELSELPKLLILQLDNNNFEG 127 (843)
Q Consensus 98 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 127 (843)
+|+|++..+..|..++ |+.|+|.+|.+..
T Consensus 89 ~N~l~~~~~~~~~~~~-L~~l~l~~N~~~c 117 (347)
T 2ifg_A 89 FNALESLSWKTVQGLS-LQELVLSGNPLHC 117 (347)
T ss_dssp SSCCSCCCSTTTCSCC-CCEEECCSSCCCC
T ss_pred CCccceeCHHHcccCC-ceEEEeeCCCccC
Confidence 8888866666666655 8888888888864
No 401
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.22 E-value=4.1e-14 Score=155.41 Aligned_cols=142 Identities=16% Similarity=0.097 Sum_probs=69.2
Q ss_pred CCCceeeccCCCCCCCCCccc-CCCCCCcEEEcCCCCCCCCCCCccc-----cCCCCCcEEEcCCCCCCCCC-----CCC
Q 003158 89 PSLVHMLLDNNNLTGYLPPEL-SELPKLLILQLDNNNFEGTTIPASY-----SNMSKLLKLSLRNCSLQGPM-----PDL 157 (843)
Q Consensus 89 ~~L~~L~L~~N~l~~~~~~~~-~~l~~L~~L~Ls~N~l~~~~~~~~~-----~~l~~L~~L~L~~N~l~~~~-----~~~ 157 (843)
++|++|+|++|.|+......+ ..+++|+.|+|++|.++. .....+ ...++|+.|+|++|.|+... ..+
T Consensus 101 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~-~~~~~L~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L 179 (372)
T 3un9_A 101 HALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGP-EACKDLRDLLLHDQCQITTLRLSNNPLTAAGVAVLMEGL 179 (372)
T ss_dssp SCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCH-HHHHHHHHHHHSTTCCCCEEECCSSCCHHHHHHHHHHHH
T ss_pred CCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCH-HHHHHHHHHHHhcCCccceeeCCCCCCChHHHHHHHHHH
Confidence 455555555555542211111 123455555555555532 111111 23455666666666554311 113
Q ss_pred CCCCCCCEEEcccCcCCCCC----CCCCC-CcCcCEEEccCCcCCCC----CCcccCCCCCCcEEeCcCccCCCCCCchh
Q 003158 158 SRIPNLGYLDLSSNQLNGSI----PPGRL-SLNITTIKLSNNKLTGT----IPSNFSGLPRLQRLFIANNSLSGSIPSSI 228 (843)
Q Consensus 158 ~~l~~L~~L~Ls~N~l~~~~----p~~~~-~~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~~p~~~ 228 (843)
..+++|++|+|++|.|++.. +.... ..+|+.|+|++|.|+.. +...+...++|++|+|++|.|++.....+
T Consensus 180 ~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~~~g~~~L 259 (372)
T 3un9_A 180 AGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNELSSEGRQVL 259 (372)
T ss_dssp HTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCCHHHHHHH
T ss_pred hcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCCHHHHHHH
Confidence 44556666666666654211 11111 12566666666666532 23344456778888888888775555555
Q ss_pred hcc
Q 003158 229 WQS 231 (843)
Q Consensus 229 ~~l 231 (843)
..+
T Consensus 260 ~~~ 262 (372)
T 3un9_A 260 RDL 262 (372)
T ss_dssp HHC
T ss_pred HHH
Confidence 443
No 402
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.19 E-value=2.7e-13 Score=148.86 Aligned_cols=141 Identities=15% Similarity=0.122 Sum_probs=64.1
Q ss_pred CCCCEEEccCCccccCCCccc-CCCCCCceeeccCCCCCCCCCccc-----CCCCCCcEEEcCCCCCCCC---CCCcccc
Q 003158 65 NKTRHFHMNNNSISGQIPPEL-SRLPSLVHMLLDNNNLTGYLPPEL-----SELPKLLILQLDNNNFEGT---TIPASYS 135 (843)
Q Consensus 65 ~~L~~L~Ls~N~l~~~~~~~l-~~l~~L~~L~L~~N~l~~~~~~~~-----~~l~~L~~L~Ls~N~l~~~---~~~~~~~ 135 (843)
++|+.|+|++|.|+......+ ..+++|+.|+|++|+|+......+ ...++|++|+|++|.|+.. .++..+.
T Consensus 101 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~ 180 (372)
T 3un9_A 101 HALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLLHDQCQITTLRLSNNPLTAAGVAVLMEGLA 180 (372)
T ss_dssp SCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHHSTTCCCCEEECCSSCCHHHHHHHHHHHHH
T ss_pred CCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHHhcCCccceeeCCCCCCChHHHHHHHHHHh
Confidence 345555555555442211111 123345555555555543222222 2234555555555555320 1222334
Q ss_pred CCCCCcEEEcCCCCCCCCC-----CCCCCCCCCCEEEcccCcCCCCCCCCC-----CCcCcCEEEccCCcCCCCCCcccC
Q 003158 136 NMSKLLKLSLRNCSLQGPM-----PDLSRIPNLGYLDLSSNQLNGSIPPGR-----LSLNITTIKLSNNKLTGTIPSNFS 205 (843)
Q Consensus 136 ~l~~L~~L~L~~N~l~~~~-----~~~~~l~~L~~L~Ls~N~l~~~~p~~~-----~~~~L~~L~Ls~N~l~~~~p~~~~ 205 (843)
.+++|++|+|++|.|+... ..+..+++|+.|+|++|.|++...... ...+|+.|+|++|.|+......+.
T Consensus 181 ~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~~~g~~~L~ 260 (372)
T 3un9_A 181 GNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNELSSEGRQVLR 260 (372)
T ss_dssp TCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCCHHHHHHHH
T ss_pred cCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCCHHHHHHHH
Confidence 4555666666666554321 124445566666666666652111110 112567777777766654333333
No 403
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.09 E-value=1.5e-10 Score=120.45 Aligned_cols=129 Identities=21% Similarity=0.149 Sum_probs=98.1
Q ss_pred cccCCeeEEEEEeCCCcEEEEEEeccCChhhHHHHHHHHHHHHhccCCc--ccceeeeeecCCcEEEEEecCCCCCHHHH
Q 003158 520 GQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRN--LVSLVGYCDEEGEQMLVYEFMSNGTLRDQ 597 (843)
Q Consensus 520 g~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n--Iv~l~~~~~~~~~~~lV~e~~~~gsL~~~ 597 (843)
+.|..+.||++...+|+.+++|+.... ....+.+|+++++.+.+.+ +.+++++...++..++||||++|.+|.
T Consensus 29 ~gg~~~~v~~~~~~~g~~~vlK~~~~~---~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i~G~~l~-- 103 (264)
T 1nd4_A 29 IGCSDAAVFRLSAQGRPVLFVKTDLSG---ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLL-- 103 (264)
T ss_dssp CTTSSCEEEEEECTTSCCEEEEEECSC---TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEETT--
T ss_pred cCCCCceEEEEecCCCCeEEEEeCCcc---cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEecCCcccC--
Confidence 456669999998777888999997653 2245778999999986544 456888888888899999999998884
Q ss_pred HhhcCCCCcchhHHHHHHHHHHHHHHHHhcCC------------------------------------------------
Q 003158 598 LSAKSKEPLGFAMRLSIALGSSRGILYLHTEA------------------------------------------------ 629 (843)
Q Consensus 598 l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~------------------------------------------------ 629 (843)
... . ....++.++++.|..||+..
T Consensus 104 ~~~-----~---~~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 175 (264)
T 1nd4_A 104 SSH-----L---APAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAELFARLK 175 (264)
T ss_dssp TSC-----C---CHHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHHHHHHHH
T ss_pred cCc-----C---CHhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccHHHHHHHHH
Confidence 211 1 12356777888888888643
Q ss_pred -------CCCEEeccCCCCcEEEcCCCcEEEeecccccc
Q 003158 630 -------DPPVFHRDIKASNILLDHKFTAKVADFGLSRL 661 (843)
Q Consensus 630 -------~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~ 661 (843)
.+.++|+|++|.||++++++.+.|+|||.+..
T Consensus 176 ~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~~ 214 (264)
T 1nd4_A 176 ARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGV 214 (264)
T ss_dssp HTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEE
T ss_pred HhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhccc
Confidence 12399999999999998876677999998753
No 404
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.06 E-value=2.2e-09 Score=119.08 Aligned_cols=253 Identities=12% Similarity=0.050 Sum_probs=145.8
Q ss_pred cccccCCccccCCCCCCEEEccCCcCCccCccccCCCCCCcEEEcccCcCCccCccccccCCCCCEEEccCCc-------
Q 003158 4 KISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNS------- 76 (843)
Q Consensus 4 ~i~~~~p~~i~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~------- 76 (843)
+++.+-..+|.++.+|+.+.|.. .++.+...+|.++++|+.++|.++ ++.+....|.++.+|+.+.+..+-
T Consensus 58 ~VtsIg~~AF~~c~~L~~i~lp~-~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~l~~i~~~a 135 (394)
T 4fs7_A 58 DVVSIGYAAFQGCRKVTEIKIPS-TVREIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLMLKSIGVEA 135 (394)
T ss_dssp EEEEECTTTTTTCTTEEEEECCT-TCCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTTCCEECTTT
T ss_pred eEeEhHHHHhhCCCCceEEEeCC-CccCcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCceeeeccee
Confidence 45666677888889999999975 477677888999999999998755 554555666666666665554321
Q ss_pred --------------cccCCCcccCCCCCCceeeccCCCCCCCCCcccCCCCCCcEEEcCCCCCCCCCCCccccCCCCCcE
Q 003158 77 --------------ISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLK 142 (843)
Q Consensus 77 --------------l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~ 142 (843)
+..+...+|.++.+|+.+.+.++..+ +....|.++.+|+.+.+..| +.. .....|.++..|+.
T Consensus 136 F~~~~~~~~~~~~~~~~i~~~aF~~c~~L~~i~l~~~~~~-I~~~~F~~c~~L~~i~l~~~-~~~-I~~~~F~~~~~L~~ 212 (394)
T 4fs7_A 136 FKGCDFKEITIPEGVTVIGDEAFATCESLEYVSLPDSMET-LHNGLFSGCGKLKSIKLPRN-LKI-IRDYCFAECILLEN 212 (394)
T ss_dssp TTTCCCSEEECCTTCCEECTTTTTTCTTCCEEECCTTCCE-ECTTTTTTCTTCCBCCCCTT-CCE-ECTTTTTTCTTCCB
T ss_pred eecccccccccCccccccchhhhcccCCCcEEecCCccce-eccccccCCCCceEEEcCCC-ceE-eCchhhccccccce
Confidence 11122345666677777777654332 44556666667776666554 211 11233444444443
Q ss_pred EEcCCCC---------------------CCCCCC-CCCCCCCCCEEEcccCcCC-------------------CCCCCCC
Q 003158 143 LSLRNCS---------------------LQGPMP-DLSRIPNLGYLDLSSNQLN-------------------GSIPPGR 181 (843)
Q Consensus 143 L~L~~N~---------------------l~~~~~-~~~~l~~L~~L~Ls~N~l~-------------------~~~p~~~ 181 (843)
+.+..+. ++.+.. .+..+.+|+.+.+..+..+ ..++...
T Consensus 213 i~~~~~~~~i~~~~~~~~~l~~i~ip~~~~~i~~~~f~~~~~l~~~~~~~~~~~i~~~~F~~~~~l~~~~~~~~~i~~~~ 292 (394)
T 4fs7_A 213 MEFPNSLYYLGDFALSKTGVKNIIIPDSFTELGKSVFYGCTDLESISIQNNKLRIGGSLFYNCSGLKKVIYGSVIVPEKT 292 (394)
T ss_dssp CCCCTTCCEECTTTTTTCCCCEEEECTTCCEECSSTTTTCSSCCEEEECCTTCEECSCTTTTCTTCCEEEECSSEECTTT
T ss_pred eecCCCceEeehhhcccCCCceEEECCCceecccccccccccceeEEcCCCcceeeccccccccccceeccCceeecccc
Confidence 3333221 111112 2445555555555544321 0122222
Q ss_pred CC--cCcCEEEccCCcCCCCCCcccCCCCCCcEEeCcCccCCCCCCchhhccccCCCCcceeEEcCCCCCCCCCCCC--c
Q 003158 182 LS--LNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGSF--N 257 (843)
Q Consensus 182 ~~--~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~l~~~~L~~L~l~~N~l~~~~~~~--~ 257 (843)
+. .+|+.+.+.++ ++.+...+|.++.+|+.++|.++ ++.....+|.++.+ |+.+++..| ++.+.... +
T Consensus 293 F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~-----L~~i~lp~~-l~~I~~~aF~~ 364 (394)
T 4fs7_A 293 FYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTS-----LSNINFPLS-LRKIGANAFQG 364 (394)
T ss_dssp TTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTT-----CCEECCCTT-CCEECTTTBTT
T ss_pred ccccccccccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCC-----CCEEEECcc-ccEehHHHhhC
Confidence 21 26777777654 55566677888888888888644 55444556655444 446777665 77776543 5
Q ss_pred CCCCcEEEeccC
Q 003158 258 IPPNVTVRLRGN 269 (843)
Q Consensus 258 ~~~l~~l~l~~N 269 (843)
..+|+.+++..|
T Consensus 365 C~~L~~i~lp~~ 376 (394)
T 4fs7_A 365 CINLKKVELPKR 376 (394)
T ss_dssp CTTCCEEEEEGG
T ss_pred CCCCCEEEECCC
Confidence 677777777543
No 405
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=98.95 E-value=1.6e-09 Score=118.46 Aligned_cols=141 Identities=22% Similarity=0.316 Sum_probs=105.5
Q ss_pred CCcccccCCeeEEEEEeCCCcEEEEEEec--cCC-hhhHHHHHHHHHHHHhcc--CCcccceeeeeecC---CcEEEEEe
Q 003158 516 STQIGQGGYGKVYKGILPDGTVVAVKRAQ--EGS-LQGEKEFLTEIQFLSRLH--HRNLVSLVGYCDEE---GEQMLVYE 587 (843)
Q Consensus 516 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~--~~~-~~~~~~~~~E~~~l~~l~--h~nIv~l~~~~~~~---~~~~lV~e 587 (843)
.+.++.|.++.||+....+ ..+++|+.. ... ......+.+|+++++.+. +..+.++++++.+. +..++|||
T Consensus 43 ~~~l~~G~sn~~y~v~~~~-~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vme 121 (359)
T 3dxp_A 43 VEQFKGGQSNPTFKLVTPG-QTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIME 121 (359)
T ss_dssp EEECCC-CCSCEEEEECSS-CEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEEE
T ss_pred EEEcCCcccceEEEEEECC-ceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEEE
Confidence 4678999999999998754 578888775 322 123457888999999997 45678889888766 45899999
Q ss_pred cCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCC--------------------------------------
Q 003158 588 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEA-------------------------------------- 629 (843)
Q Consensus 588 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~-------------------------------------- 629 (843)
|++|..+.+.. ...++...+..++.+++++|..||+..
T Consensus 122 ~v~G~~l~~~~----~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (359)
T 3dxp_A 122 FVSGRVLWDQS----LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIPAM 197 (359)
T ss_dssp CCCCBCCCCTT----CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCHHH
T ss_pred ecCCeecCCCc----cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCChHH
Confidence 99987775421 123567778889999999999999731
Q ss_pred -----------------CCCEEeccCCCCcEEEcCCCc--EEEeecccccc
Q 003158 630 -----------------DPPVFHRDIKASNILLDHKFT--AKVADFGLSRL 661 (843)
Q Consensus 630 -----------------~~~iiH~Dlkp~NILl~~~~~--~kl~DfGla~~ 661 (843)
.+.++|+|+++.||+++.++. +.|.||+.+..
T Consensus 198 ~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 198 DSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp HHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred HHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 245999999999999997753 68999998864
No 406
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=98.88 E-value=5.9e-08 Score=107.47 Aligned_cols=254 Identities=14% Similarity=0.128 Sum_probs=150.5
Q ss_pred ccccCCccccCCC-CCCEEEccCCcCCccCccccCCCCCCcEEEcccCc---CCccCccccccCCCCCEEEccCCccccC
Q 003158 5 ISGSIPKEIGNIK-SLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNY---ISGSLPKSFANLNKTRHFHMNNNSISGQ 80 (843)
Q Consensus 5 i~~~~p~~i~~l~-~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~---l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 80 (843)
++.+-..+|.+.. .|+.+.|.++ ++.+...+|.++++|+.+.+..|. ++.+....|.++.+|+.+.+.++ ++.+
T Consensus 51 Vt~Ig~~aF~~~~~~L~sI~iP~s-vt~Ig~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~-~~~I 128 (394)
T 4gt6_A 51 VSKIGDRVFCNYKYVLTSVQIPDT-VTEIGSNAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS-VTEI 128 (394)
T ss_dssp EEEECTTTTTTCCSCCCEEEECTT-CCEECTTTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-CSEE
T ss_pred eeEcCHhhccCCCCcCEEEEECCC-eeEEhHHHhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-ccee
Confidence 4445556676663 5777777654 665677777788888888777654 55445566777777777666544 4435
Q ss_pred CCcccCCCCCCceeeccCCCCCCCCCcccCCCCCCcEEEcCCCCCC------------CC--------CCCccccCCCCC
Q 003158 81 IPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFE------------GT--------TIPASYSNMSKL 140 (843)
Q Consensus 81 ~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~------------~~--------~~~~~~~~l~~L 140 (843)
...+|..+.+|+.+.+..+ +..+....|..+..|+.+.+.++--. .. .....|.++.+|
T Consensus 129 ~~~aF~~c~~L~~i~lp~~-~~~I~~~~F~~c~~L~~i~~~~~~~~I~~~aF~~~~l~~i~ip~~~~~i~~~af~~c~~l 207 (394)
T 4gt6_A 129 DSEAFHHCEELDTVTIPEG-VTSVADGMFSYCYSLHTVTLPDSVTAIEERAFTGTALTQIHIPAKVTRIGTNAFSECFAL 207 (394)
T ss_dssp CTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEECCTTCCEECTTTTTTCCCSEEEECTTCCEECTTTTTTCTTC
T ss_pred hhhhhhhhcccccccccce-eeeecccceecccccccccccceeeEeccccccccceeEEEECCcccccccchhhhcccc
Confidence 5556666667777666543 23244455555666666655433110 00 112234444444
Q ss_pred cEEEcCCCCC------------------------------------CCCCC-CCCCCCCCCEEEcccCcCCCCCCCCCCC
Q 003158 141 LKLSLRNCSL------------------------------------QGPMP-DLSRIPNLGYLDLSSNQLNGSIPPGRLS 183 (843)
Q Consensus 141 ~~L~L~~N~l------------------------------------~~~~~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 183 (843)
+......+.. +.+.. .|..+.+|+.+.+..+.. .+....+.
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~v~~i~~~aF~~c~~L~~i~lp~~~~--~I~~~aF~ 285 (394)
T 4gt6_A 208 STITSDSESYPAIDNVLYEKSANGDYALIRYPSQREDPAFKIPNGVARIETHAFDSCAYLASVKMPDSVV--SIGTGAFM 285 (394)
T ss_dssp CEEEECCSSSCBSSSCEEEECTTSCEEEEECCTTCCCSEEECCTTEEEECTTTTTTCSSCCEEECCTTCC--EECTTTTT
T ss_pred ceecccccccccccceeecccccccccccccccccccceEEcCCcceEcccceeeecccccEEecccccc--eecCcccc
Confidence 4443322211 11112 366677777777765544 34444333
Q ss_pred --cCcCEEEccCCcCCCCCCcccCCCCCCcEEeCcCccCCCCCCchhhccccCCCCcceeEEcCCCCCCCCCCCC--cCC
Q 003158 184 --LNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGSF--NIP 259 (843)
Q Consensus 184 --~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~l~~~~L~~L~l~~N~l~~~~~~~--~~~ 259 (843)
.+|+.+.+. +.++.+...+|.++.+|+.++|.++ ++.....+|.++.+| +.+.+..+ ++.+.... +..
T Consensus 286 ~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L-----~~i~ip~s-v~~I~~~aF~~C~ 357 (394)
T 4gt6_A 286 NCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQL-----ERIAIPSS-VTKIPESAFSNCT 357 (394)
T ss_dssp TCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTC-----CEEEECTT-CCBCCGGGGTTCT
T ss_pred cccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCC-----CEEEECcc-cCEEhHhHhhCCC
Confidence 368888885 4566566778888888888888764 554445566655444 47777544 77776543 678
Q ss_pred CCcEEEeccCcc
Q 003158 260 PNVTVRLRGNPF 271 (843)
Q Consensus 260 ~l~~l~l~~Np~ 271 (843)
+|+.+++.+|..
T Consensus 358 ~L~~i~~~~~~~ 369 (394)
T 4gt6_A 358 ALNNIEYSGSRS 369 (394)
T ss_dssp TCCEEEESSCHH
T ss_pred CCCEEEECCcee
Confidence 888888887754
No 407
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.86 E-value=2.9e-09 Score=113.56 Aligned_cols=192 Identities=16% Similarity=0.152 Sum_probs=120.9
Q ss_pred CCcccccCCeeEEEEEeCCCcEEEEEEeccCChhhHHHHHHHHHHHHhcc-CCc--ccceeeeeecCC---cEEEEEecC
Q 003158 516 STQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLH-HRN--LVSLVGYCDEEG---EQMLVYEFM 589 (843)
Q Consensus 516 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~n--Iv~l~~~~~~~~---~~~lV~e~~ 589 (843)
.+.++.|....||+.. ..+++|+... ......+.+|+++++.+. +.. +.+++......+ ..|+|||++
T Consensus 25 i~~~~~G~~n~v~~v~----~~~vlR~~~~--~~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i 98 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN----RDFIFKFPKH--SRGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKI 98 (304)
T ss_dssp CCEEEECSSEEEEEST----TSEEEEEESS--HHHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECC
T ss_pred eEecCCCCcceEEEEC----CEEEEEecCC--cchHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEccc
Confidence 4568999999999863 4588898653 234567899999998884 333 344555443333 348999999
Q ss_pred CCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcC-----------------------------------------
Q 003158 590 SNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTE----------------------------------------- 628 (843)
Q Consensus 590 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~----------------------------------------- 628 (843)
+|.++.+.... .++..++..++.++++.|..||+.
T Consensus 99 ~G~~l~~~~~~----~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 174 (304)
T 3sg8_A 99 KGVPLTPLLLN----NLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKKVD 174 (304)
T ss_dssp CCEECCHHHHH----TSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHHHH
T ss_pred CCeECCccccc----cCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHHHH
Confidence 99888653321 245666677788888888888851
Q ss_pred --------------CCCCEEeccCCCCcEEEcC--CCcEEEeeccccccCCCCC-CCCcc------cceeeeeecccCCc
Q 003158 629 --------------ADPPVFHRDIKASNILLDH--KFTAKVADFGLSRLAPVPD-IEGIV------PAHVSTVVKGTPGY 685 (843)
Q Consensus 629 --------------~~~~iiH~Dlkp~NILl~~--~~~~kl~DfGla~~~~~~~-~~~~~------~~~~~~~~~gt~~y 685 (843)
..+.++|+|++|.||++++ ...+.|+||+.+...+... ..... ............++
T Consensus 175 ~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~l~~Y~~ 254 (304)
T 3sg8_A 175 DFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSKILNHYKH 254 (304)
T ss_dssp HHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTTTSCCHHHHHHHHHHHTC
T ss_pred HHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhccccCHHHHHHHHHHcCC
Confidence 1245899999999999998 5568899999986532110 00000 00000000001111
Q ss_pred cC-chhcccCCCCchhhhHHHHHHHHHHHhCCCCC
Q 003158 686 LD-PEYFLTHKLTDKSDVYSLGVVFLELLTGMQPI 719 (843)
Q Consensus 686 ~a-PE~~~~~~~~~~sDvwS~G~~l~elltg~~pf 719 (843)
.. |+..... ....+.|++|.++|++.+|..+|
T Consensus 255 ~~~~~~~~r~--~~~~~~~~l~~~~~~~~~g~~~~ 287 (304)
T 3sg8_A 255 KDIPTVLEKY--RMKEKYWSFEKIIYGKEYGYMDW 287 (304)
T ss_dssp SCHHHHHHHH--HHHHHHHHHHHHHHHHHTTCHHH
T ss_pred CCcHHHHHHH--HHHHHHHHHHHHHHHHHcCCHHH
Confidence 22 2222111 12368999999999999998776
No 408
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=98.86 E-value=2.4e-08 Score=110.69 Aligned_cols=185 Identities=16% Similarity=0.082 Sum_probs=120.5
Q ss_pred cCCccCccccCCCCCCcEEEcccCcCCccCccccccCCCCCEEEccCCccccCCCcccCCCCCCceeeccCCCCCCC---
Q 003158 28 ELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGY--- 104 (843)
Q Consensus 28 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~--- 104 (843)
.++.+...+|.++.+|+.+.|.. .++.+...+|.++.+|+.++|.++ ++.+...+|.++.+|+.+.+..+ +..+
T Consensus 58 ~VtsIg~~AF~~c~~L~~i~lp~-~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~-l~~i~~~ 134 (394)
T 4fs7_A 58 DVVSIGYAAFQGCRKVTEIKIPS-TVREIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLM-LKSIGVE 134 (394)
T ss_dssp EEEEECTTTTTTCTTEEEEECCT-TCCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECTT
T ss_pred eEeEhHHHHhhCCCCceEEEeCC-CccCcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCc-eeeecce
Confidence 46667788999999999999975 477677888999999999999865 66566778999999988877654 2212
Q ss_pred -------------------CCcccCCCCCCcEEEcCCCCCCCCCCCccccCCCCCcEEEcCCCCCCCCCC-CCCCCCCCC
Q 003158 105 -------------------LPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMP-DLSRIPNLG 164 (843)
Q Consensus 105 -------------------~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~l~~L~ 164 (843)
...+|.++.+|+.+.+.++... .....|.++.+|+.+.+..| ++.+.. .|..+..|+
T Consensus 135 aF~~~~~~~~~~~~~~~~i~~~aF~~c~~L~~i~l~~~~~~--I~~~~F~~c~~L~~i~l~~~-~~~I~~~~F~~~~~L~ 211 (394)
T 4fs7_A 135 AFKGCDFKEITIPEGVTVIGDEAFATCESLEYVSLPDSMET--LHNGLFSGCGKLKSIKLPRN-LKIIRDYCFAECILLE 211 (394)
T ss_dssp TTTTCCCSEEECCTTCCEECTTTTTTCTTCCEEECCTTCCE--ECTTTTTTCTTCCBCCCCTT-CCEECTTTTTTCTTCC
T ss_pred eeecccccccccCccccccchhhhcccCCCcEEecCCccce--eccccccCCCCceEEEcCCC-ceEeCchhhccccccc
Confidence 2335666677777777655431 23445667777777777655 444444 366666666
Q ss_pred EEEcccCcCCCCCCCCCCCcCcCEEEccCCcCCCCCCcccCCCCCCcEEeCcCccC
Q 003158 165 YLDLSSNQLNGSIPPGRLSLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSL 220 (843)
Q Consensus 165 ~L~Ls~N~l~~~~p~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l 220 (843)
.+.+..+... .........+|+.+.+..+ ++......|.++..|+.+.+..+..
T Consensus 212 ~i~~~~~~~~-i~~~~~~~~~l~~i~ip~~-~~~i~~~~f~~~~~l~~~~~~~~~~ 265 (394)
T 4fs7_A 212 NMEFPNSLYY-LGDFALSKTGVKNIIIPDS-FTELGKSVFYGCTDLESISIQNNKL 265 (394)
T ss_dssp BCCCCTTCCE-ECTTTTTTCCCCEEEECTT-CCEECSSTTTTCSSCCEEEECCTTC
T ss_pred eeecCCCceE-eehhhcccCCCceEEECCC-ceecccccccccccceeEEcCCCcc
Confidence 6666555432 1111222235666666543 3334455666777777777766543
No 409
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.78 E-value=5e-10 Score=121.84 Aligned_cols=134 Identities=19% Similarity=0.266 Sum_probs=67.8
Q ss_pred cCCCCCCceeeccCCC-CCCCCCcccCCCCCCcEEEcCCCCCCCCCCCcccc--CCCCCcEEEcCC--CCCC------CC
Q 003158 85 LSRLPSLVHMLLDNNN-LTGYLPPELSELPKLLILQLDNNNFEGTTIPASYS--NMSKLLKLSLRN--CSLQ------GP 153 (843)
Q Consensus 85 l~~l~~L~~L~L~~N~-l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~--~l~~L~~L~L~~--N~l~------~~ 153 (843)
+..+|+|+.|+|++|. +. ++. +. +++|+.|+|..|.+.. .....+. .+++|+.|+|+. |... .+
T Consensus 168 l~~~P~L~~L~L~g~~~l~--l~~-~~-~~~L~~L~L~~~~l~~-~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l 242 (362)
T 2ra8_A 168 LDAMPLLNNLKIKGTNNLS--IGK-KP-RPNLKSLEIISGGLPD-SVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVF 242 (362)
T ss_dssp HHTCTTCCEEEEECCBTCB--CCS-CB-CTTCSEEEEECSBCCH-HHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGT
T ss_pred HhcCCCCcEEEEeCCCCce--ecc-cc-CCCCcEEEEecCCCCh-HHHHHHHHccCCCCcEEEEeccccccccchhHHHH
Confidence 3455566666665552 21 122 22 5666666666665532 1112222 456666666642 1111 11
Q ss_pred CCCC--CCCCCCCEEEcccCcCCCCCCC----CCCCcCcCEEEccCCcCCCCC----CcccCCCCCCcEEeCcCccCCCC
Q 003158 154 MPDL--SRIPNLGYLDLSSNQLNGSIPP----GRLSLNITTIKLSNNKLTGTI----PSNFSGLPRLQRLFIANNSLSGS 223 (843)
Q Consensus 154 ~~~~--~~l~~L~~L~Ls~N~l~~~~p~----~~~~~~L~~L~Ls~N~l~~~~----p~~~~~l~~L~~L~L~~N~l~~~ 223 (843)
.+.+ ..+++|+.|+|++|.+.+..+. ....++|++|+|+.|.|+... +..+..+++|+.|+|++|.|+..
T Consensus 243 ~~~l~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d~ 322 (362)
T 2ra8_A 243 RPLFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSDE 322 (362)
T ss_dssp GGGSCTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCHH
T ss_pred HHHHhcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCCHH
Confidence 1111 2467777777777776532211 112336777777777766532 22233457777777777776643
No 410
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.66 E-value=2.7e-09 Score=115.97 Aligned_cols=179 Identities=13% Similarity=0.193 Sum_probs=96.3
Q ss_pred cccCCCCCCcEEEcccCcCC---------ccCccccccCCCCCEEEccCCc-cccCCCcccCCCCCCceeeccCCCCCCC
Q 003158 35 EELGYLPKLDRIQIDQNYIS---------GSLPKSFANLNKTRHFHMNNNS-ISGQIPPELSRLPSLVHMLLDNNNLTGY 104 (843)
Q Consensus 35 ~~~~~l~~L~~L~L~~N~l~---------~~~~~~~~~l~~L~~L~Ls~N~-l~~~~~~~l~~l~~L~~L~L~~N~l~~~ 104 (843)
.+...+++|+.|.+..+... +.+...+..+++|+.|+|++|. +. ++. +. +++|+.|+|..|.+...
T Consensus 133 ~s~~~l~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l~--l~~-~~-~~~L~~L~L~~~~l~~~ 208 (362)
T 2ra8_A 133 ENKEKFAHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNLS--IGK-KP-RPNLKSLEIISGGLPDS 208 (362)
T ss_dssp TTHHHHTTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTCB--CCS-CB-CTTCSEEEEECSBCCHH
T ss_pred HhhhhcchhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCce--ecc-cc-CCCCcEEEEecCCCChH
Confidence 33445566666666544321 1233445566777777777663 22 222 32 66777777777776533
Q ss_pred CCcccC--CCCCCcEEEcCC--CCCCCC----CCCccc--cCCCCCcEEEcCCCCCCCCCC-C---CCCCCCCCEEEccc
Q 003158 105 LPPELS--ELPKLLILQLDN--NNFEGT----TIPASY--SNMSKLLKLSLRNCSLQGPMP-D---LSRIPNLGYLDLSS 170 (843)
Q Consensus 105 ~~~~~~--~l~~L~~L~Ls~--N~l~~~----~~~~~~--~~l~~L~~L~L~~N~l~~~~~-~---~~~l~~L~~L~Ls~ 170 (843)
....+. .+|+|+.|+|+. |...+. .+...+ ..+++|+.|+|.+|.+..... . ...+++|+.|+|+.
T Consensus 209 ~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~ 288 (362)
T 2ra8_A 209 VVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISA 288 (362)
T ss_dssp HHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCS
T ss_pred HHHHHHHccCCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCC
Confidence 222332 567777777743 221110 011122 246788888888877764211 1 23467888888888
Q ss_pred CcCCCC----CCCC-CCCcCcCEEEccCCcCCCCCCcccCC-CCCCcEEeCcCcc
Q 003158 171 NQLNGS----IPPG-RLSLNITTIKLSNNKLTGTIPSNFSG-LPRLQRLFIANNS 219 (843)
Q Consensus 171 N~l~~~----~p~~-~~~~~L~~L~Ls~N~l~~~~p~~~~~-l~~L~~L~L~~N~ 219 (843)
|.|.+. ++.. ....+|+.|+|++|.|+...-..+.. + ...+++++|+
T Consensus 289 n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d~~~~~l~~al--g~~~~~~~~~ 341 (362)
T 2ra8_A 289 GVLTDEGARLLLDHVDKIKHLKFINMKYNYLSDEMKKELQKSL--PMKIDVSDSQ 341 (362)
T ss_dssp SCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCHHHHHHHHHHC--CSEEECCSBC
T ss_pred CCCChHHHHHHHhhcccCCcceEEECCCCcCCHHHHHHHHHHc--CCEEEecCCc
Confidence 887642 2222 11237888888888877543333332 2 3445666655
No 411
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=98.64 E-value=8.6e-07 Score=98.03 Aligned_cols=136 Identities=10% Similarity=0.094 Sum_probs=101.8
Q ss_pred CCccCccccCCCC-CCcEEEcccCcCCccCccccccCCCCCEEEccCCc---cccCCCcccCCCCCCceeeccCCCCCCC
Q 003158 29 LTGSLPEELGYLP-KLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNS---ISGQIPPELSRLPSLVHMLLDNNNLTGY 104 (843)
Q Consensus 29 l~~~~p~~~~~l~-~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~---l~~~~~~~l~~l~~L~~L~L~~N~l~~~ 104 (843)
++.+...+|.++. .|+.+.|..+ ++.+...+|.++.+|+.+.+++|. ++.+...+|.++.+|+.+.+.++ ++.+
T Consensus 51 Vt~Ig~~aF~~~~~~L~sI~iP~s-vt~Ig~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~-~~~I 128 (394)
T 4gt6_A 51 VSKIGDRVFCNYKYVLTSVQIPDT-VTEIGSNAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS-VTEI 128 (394)
T ss_dssp EEEECTTTTTTCCSCCCEEEECTT-CCEECTTTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-CSEE
T ss_pred eeEcCHhhccCCCCcCEEEEECCC-eeEEhHHHhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-ccee
Confidence 5556677888885 5999999765 776788899999999999999875 66666788999999999988765 5556
Q ss_pred CCcccCCCCCCcEEEcCCCCCCCCCCCccccCCCCCcEEEcCCCCCCCCCCC-CCCCCCCCEEEccc
Q 003158 105 LPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMPD-LSRIPNLGYLDLSS 170 (843)
Q Consensus 105 ~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~ 170 (843)
...+|..+.+|+.+.+..+-.. .....|.++.+|+.+.+..+ ++.+... |. ..+|+.+.+..
T Consensus 129 ~~~aF~~c~~L~~i~lp~~~~~--I~~~~F~~c~~L~~i~~~~~-~~~I~~~aF~-~~~l~~i~ip~ 191 (394)
T 4gt6_A 129 DSEAFHHCEELDTVTIPEGVTS--VADGMFSYCYSLHTVTLPDS-VTAIEERAFT-GTALTQIHIPA 191 (394)
T ss_dssp CTTTTTTCTTCCEEECCTTCCE--ECTTTTTTCTTCCEEECCTT-CCEECTTTTT-TCCCSEEEECT
T ss_pred hhhhhhhhcccccccccceeee--ecccceecccccccccccce-eeEecccccc-ccceeEEEECC
Confidence 6788999999999999865432 33557888888998888765 4433332 32 34555555543
No 412
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=98.53 E-value=5.8e-08 Score=88.92 Aligned_cols=70 Identities=20% Similarity=0.248 Sum_probs=51.7
Q ss_pred EEeCcCccCC-CCCCchhhccccCCCCcceeEEcCCCCCCCCCCCC--cCCCCcEEEeccCcccccCCcccccCCCCCCC
Q 003158 212 RLFIANNSLS-GSIPSSIWQSRTLNATETFILDFQNNNLTNISGSF--NIPPNVTVRLRGNPFCLNTNAEQFCGSHSDDD 288 (843)
Q Consensus 212 ~L~L~~N~l~-~~~p~~~~~l~~l~~~~L~~L~l~~N~l~~~~~~~--~~~~l~~l~l~~Np~~c~~~~~~~~~~~~~~~ 288 (843)
.++.+++.|+ ..+|..+. ++|+.|+|++|+|+.++... .++.+..|+|.+|||.|||.+.+|..|+....
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp-------~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~CdC~l~~l~~wl~~~~ 84 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP-------VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWRCDCRLVPLRAWLAGRP 84 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC-------TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCBCSGGGHHHHHHHHTSS
T ss_pred EEEeCCCCCccccCCCCCC-------cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCeeccCccHHHHHHHHhCc
Confidence 4555666654 34554331 24567888888888887654 68889999999999999999999999987554
No 413
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.52 E-value=4.4e-07 Score=95.50 Aligned_cols=75 Identities=20% Similarity=0.239 Sum_probs=60.5
Q ss_pred CCcccccCCeeEEEEEeCCCcEEEEEEeccCChhhHHHHHHHHHHHHhccCC---cccceeeeeecCCcEEEEEecCCCC
Q 003158 516 STQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHR---NLVSLVGYCDEEGEQMLVYEFMSNG 592 (843)
Q Consensus 516 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~---nIv~l~~~~~~~~~~~lV~e~~~~g 592 (843)
.+.|+.|.++.||++...+|+.++||+...........+.+|++.|+.+++. .+.+++++. ..++||||++++
T Consensus 20 ~~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvme~l~g~ 95 (288)
T 3d1u_A 20 VAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWVDER 95 (288)
T ss_dssp EEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECCCCC
T ss_pred eeeeCCcchhheEEEEeCCCCeEEEEecCCCCcchhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEEEecccC
Confidence 5679999999999999888999999997543333345789999999999875 577777763 468999999998
Q ss_pred CH
Q 003158 593 TL 594 (843)
Q Consensus 593 sL 594 (843)
++
T Consensus 96 ~~ 97 (288)
T 3d1u_A 96 PP 97 (288)
T ss_dssp CC
T ss_pred CC
Confidence 75
No 414
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.51 E-value=4.8e-07 Score=97.02 Aligned_cols=136 Identities=15% Similarity=0.188 Sum_probs=99.0
Q ss_pred CCCCCCcccccCCeeEEEEEeCCCcEEEEEEeccCChhhHHHHHHHHHHHHhccC----CcccceeeeeecCCcEEEEEe
Q 003158 512 NFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHH----RNLVSLVGYCDEEGEQMLVYE 587 (843)
Q Consensus 512 ~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h----~nIv~l~~~~~~~~~~~lV~e 587 (843)
.....+.++.|....||+. ++.+++|+... ......+.+|.++++.+.+ -.+.+++++ +..++|||
T Consensus 38 ~i~~v~~l~~G~~n~vy~v----g~~~vlR~~~~--~~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~lvme 107 (320)
T 3r70_A 38 KINELRYLSSGDDSDTFLC----NEQYVVKVPKR--DSVRISQKRELELYRFLENCKLSYQIPAVVYQ----SDRFNIMK 107 (320)
T ss_dssp CCSCEEEEEECSSEEEEEE----TTTEEEEEESS--HHHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSCEEEE
T ss_pred ceEEEEeCCCCCCceEEEE----CCEEEEEeCCc--HHHHHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcEEEEe
Confidence 4555678999999999998 66788888753 2224568899999998866 123445544 56789999
Q ss_pred cCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCC--------------------------------------
Q 003158 588 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEA-------------------------------------- 629 (843)
Q Consensus 588 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~-------------------------------------- 629 (843)
|++|.++.+... ..++..++..++.++++.|..||+..
T Consensus 108 ~i~G~~l~~~~~----~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (320)
T 3r70_A 108 YIKGERITYEQY----HKLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQLLTD 183 (320)
T ss_dssp CCCCBCCCHHHH----TTSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTTCCCH
T ss_pred ecCCcccccccc----ccCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhcccccc
Confidence 999988864321 12445556667777777777777432
Q ss_pred ----------------------CCCEEeccCCCCcEEEcCCCcEEEeecccccc
Q 003158 630 ----------------------DPPVFHRDIKASNILLDHKFTAKVADFGLSRL 661 (843)
Q Consensus 630 ----------------------~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~ 661 (843)
.+.++|+|++|.||+++++..+.|+||+.+..
T Consensus 184 ~~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~ 237 (320)
T 3r70_A 184 EMLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNV 237 (320)
T ss_dssp HHHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEE
T ss_pred cchHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCccccc
Confidence 13469999999999999976679999999864
No 415
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=98.51 E-value=3.8e-06 Score=92.27 Aligned_cols=230 Identities=12% Similarity=0.074 Sum_probs=106.1
Q ss_pred cCCccccCCCCCCEEEccCCcCCccCccccCCCCCCcEEEcccCcCCccCccccccCCCCCEEEccCCccccCCCcccCC
Q 003158 8 SIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSR 87 (843)
Q Consensus 8 ~~p~~i~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~ 87 (843)
+-..+|.++.+|+.++|..+ ++.+...+|.+. +|+.+.+..+ ++.+....|.+. +|+.+.+.++- +.+...+|.+
T Consensus 60 Ig~~aF~~C~~L~~I~lp~~-v~~Ig~~aF~~c-~l~~i~~~~~-l~~I~~~aF~~~-~L~~i~lp~~~-~~i~~~~F~~ 134 (379)
T 4h09_A 60 IGEANFNSCYNMTKVTVAST-VTSIGDGAFADT-KLQSYTGMER-VKKFGDYVFQGT-DLDDFEFPGAT-TEIGNYIFYN 134 (379)
T ss_dssp ECTTTTTTCTTCCEEEECTT-CCEECTTTTTTC-CCCEEEECTT-CCEECTTTTTTC-CCSEEECCTTC-CEECTTTTTT
T ss_pred hHHHHhhCCCCCCEEEeCCc-ceEechhhhcCC-CCceEECCce-eeEeccceeccC-CcccccCCCcc-cccccccccc
Confidence 33444555555555555433 443444555544 3444444332 332333333332 45555554432 2122233333
Q ss_pred CCCCceeeccCCCCCCCCCcccCCCCCCcEEEcCCCCCCCC----------------------------------CCCcc
Q 003158 88 LPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGT----------------------------------TIPAS 133 (843)
Q Consensus 88 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~----------------------------------~~~~~ 133 (843)
+ +|+.+.+..+ ++.+....|..+..|+.+.+..+..... .....
T Consensus 135 ~-~l~~~~~~~~-v~~i~~~~f~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 212 (379)
T 4h09_A 135 S-SVKRIVIPKS-VTTIKDGIGYKAENLEKIEVSSNNKNYVAENYVLYNKNKTILESYPAAKTGTEFTIPSTVKTVTAYG 212 (379)
T ss_dssp C-CCCEEEECTT-CCEECSCTTTTCTTCCEEEECTTCSSEEEETTEEEETTSSEEEECCTTCCCSEEECCTTCCEECTTT
T ss_pred c-eeeeeeccce-eeccccchhcccccccccccccccceeecccceecccccceeccccccccccccccccceeEEeecc
Confidence 2 3333333322 2323344556666666666554332100 01122
Q ss_pred ccCCCCCcEEEcCCCCCCCCCC-CCCCCCCCCEEEcccCcCCCCCCCCCCC--cCcCEEEccCCcCCCCCCcccCCCCCC
Q 003158 134 YSNMSKLLKLSLRNCSLQGPMP-DLSRIPNLGYLDLSSNQLNGSIPPGRLS--LNITTIKLSNNKLTGTIPSNFSGLPRL 210 (843)
Q Consensus 134 ~~~l~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~--~~L~~L~Ls~N~l~~~~p~~~~~l~~L 210 (843)
+..+.+|+.+.+..+ ++.+.. .+..+.+|+.+.+..+ ++ .+....+. .+|+.+.+..+ ++......|.++.+|
T Consensus 213 f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~-~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L 288 (379)
T 4h09_A 213 FSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VT-SIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNL 288 (379)
T ss_dssp TTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CC-EECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTC
T ss_pred cccccccceeeeccc-eeEEccccccCCccceEEEcCCC-cc-EeCccccceeehhcccccccc-ceecccccccccccc
Confidence 334445555555433 222222 3556666666666554 33 34433332 25666666443 443445566666666
Q ss_pred cEEeCcCccCCCCCCchhhccccCCCCcceeEEcCCCCCCCCCC
Q 003158 211 QRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISG 254 (843)
Q Consensus 211 ~~L~L~~N~l~~~~p~~~~~l~~l~~~~L~~L~l~~N~l~~~~~ 254 (843)
+.+.+.++.++.....+|..+.+| +.++|.++ ++.+..
T Consensus 289 ~~i~l~~~~i~~I~~~aF~~c~~L-----~~i~lp~~-l~~I~~ 326 (379)
T 4h09_A 289 TKVVMDNSAIETLEPRVFMDCVKL-----SSVTLPTA-LKTIQV 326 (379)
T ss_dssp CEEEECCTTCCEECTTTTTTCTTC-----CEEECCTT-CCEECT
T ss_pred ccccccccccceehhhhhcCCCCC-----CEEEcCcc-ccEEHH
Confidence 666666666654444455444333 35555433 555443
No 416
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.46 E-value=2.1e-08 Score=98.30 Aligned_cols=117 Identities=14% Similarity=0.200 Sum_probs=56.5
Q ss_pred cccCCCCCCcEEEcccC-cCCcc----CccccccCCCCCEEEccCCccccC----CCcccCCCCCCceeeccCCCCCCC-
Q 003158 35 EELGYLPKLDRIQIDQN-YISGS----LPKSFANLNKTRHFHMNNNSISGQ----IPPELSRLPSLVHMLLDNNNLTGY- 104 (843)
Q Consensus 35 ~~~~~l~~L~~L~L~~N-~l~~~----~~~~~~~l~~L~~L~Ls~N~l~~~----~~~~l~~l~~L~~L~L~~N~l~~~- 104 (843)
..+...+.|++|+|++| .|... +...+...++|++|+|++|.|+.. +...+...++|++|+|++|.|+..
T Consensus 30 ~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g 109 (185)
T 1io0_A 30 RIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSG 109 (185)
T ss_dssp HHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHH
T ss_pred HHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHH
Confidence 33444555555555555 54421 223334445555555555555421 122233345555555555555522
Q ss_pred ---CCcccCCCCCCcEEEc--CCCCCCCCC---CCccccCCCCCcEEEcCCCCCC
Q 003158 105 ---LPPELSELPKLLILQL--DNNNFEGTT---IPASYSNMSKLLKLSLRNCSLQ 151 (843)
Q Consensus 105 ---~~~~~~~l~~L~~L~L--s~N~l~~~~---~~~~~~~l~~L~~L~L~~N~l~ 151 (843)
+...+...++|++|+| ++|.|.... +...+...++|+.|+|++|.+.
T Consensus 110 ~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 110 ILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 2334445556666666 556654210 2233444566666666666653
No 417
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.35 E-value=2.8e-08 Score=102.46 Aligned_cols=105 Identities=28% Similarity=0.309 Sum_probs=65.0
Q ss_pred cCCCCCCcE--EEcccCcCC---ccCccccccCCCCCEEEccCCccccC--CCcccCCCCCCceeeccCCCCCCCCCccc
Q 003158 37 LGYLPKLDR--IQIDQNYIS---GSLPKSFANLNKTRHFHMNNNSISGQ--IPPELSRLPSLVHMLLDNNNLTGYLPPEL 109 (843)
Q Consensus 37 ~~~l~~L~~--L~L~~N~l~---~~~~~~~~~l~~L~~L~Ls~N~l~~~--~~~~l~~l~~L~~L~L~~N~l~~~~~~~~ 109 (843)
|...+.|.. ++++.|... ..+.....++++|+.|+|++|+|+++ ++..+..+++|+.|+|++|+|++. ..+
T Consensus 137 l~~dp~L~~~~l~l~~N~~~~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l 214 (267)
T 3rw6_A 137 LRSDPDLVAQNIDVVLNRRSCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--REL 214 (267)
T ss_dssp GGGCHHHHHTTCCCCTTSHHHHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGG
T ss_pred cCCCcchhhcCccccCCHHHHHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhh
Confidence 444445554 566666433 22222225567788888888887753 345556777888888888888754 333
Q ss_pred CCCC--CCcEEEcCCCCCCCCCCC-------ccccCCCCCcEEE
Q 003158 110 SELP--KLLILQLDNNNFEGTTIP-------ASYSNMSKLLKLS 144 (843)
Q Consensus 110 ~~l~--~L~~L~Ls~N~l~~~~~~-------~~~~~l~~L~~L~ 144 (843)
..+. +|++|+|++|.+.+ .+| ..+..+++|+.||
T Consensus 215 ~~l~~l~L~~L~L~~Npl~~-~~~~~~~y~~~il~~~P~L~~LD 257 (267)
T 3rw6_A 215 DKIKGLKLEELWLDGNSLCD-TFRDQSTYISAIRERFPKLLRLD 257 (267)
T ss_dssp GGGTTSCCSEEECTTSTTGG-GCSSHHHHHHHHHHHCTTCCEES
T ss_pred hhcccCCcceEEccCCcCcc-ccCcchhHHHHHHHHCcccCeEC
Confidence 3333 78888888888764 333 2356778888775
No 418
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.34 E-value=3.8e-08 Score=96.49 Aligned_cols=113 Identities=19% Similarity=0.183 Sum_probs=54.0
Q ss_pred ccCCCCCCEEEccCC-cCCcc----CccccCCCCCCcEEEcccCcCCcc----CccccccCCCCCEEEccCCccccC---
Q 003158 13 IGNIKSLELLLLNGN-ELTGS----LPEELGYLPKLDRIQIDQNYISGS----LPKSFANLNKTRHFHMNNNSISGQ--- 80 (843)
Q Consensus 13 i~~l~~L~~L~L~~n-~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~----~~~~~~~l~~L~~L~Ls~N~l~~~--- 80 (843)
+.+.++|++|+|++| .|+.. +...+...+.|++|+|++|.|+.. +...+...++|++|+|++|.|+..
T Consensus 32 l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~~ 111 (185)
T 1io0_A 32 QNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGIL 111 (185)
T ss_dssp HTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHH
T ss_pred HhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHHH
Confidence 334455555555555 55421 333444455555555555555421 222333445555555555555522
Q ss_pred -CCcccCCCCCCceeec--cCCCCCCC----CCcccCCCCCCcEEEcCCCCC
Q 003158 81 -IPPELSRLPSLVHMLL--DNNNLTGY----LPPELSELPKLLILQLDNNNF 125 (843)
Q Consensus 81 -~~~~l~~l~~L~~L~L--~~N~l~~~----~~~~~~~l~~L~~L~Ls~N~l 125 (843)
+...+...++|++|+| ++|.|+.. +...+...++|++|+|++|.+
T Consensus 112 ~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i 163 (185)
T 1io0_A 112 ALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQ 163 (185)
T ss_dssp HHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSH
T ss_pred HHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCC
Confidence 2333444455555555 55555522 122333345555555555554
No 419
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.33 E-value=3.6e-06 Score=89.46 Aligned_cols=136 Identities=21% Similarity=0.204 Sum_probs=92.1
Q ss_pred CCcccccCCeeEEEEEeCCCcEEEEEEeccCChhhHHHHHHHHHHHHhccCC---cccceeeeee-cCCcEEEEEecCCC
Q 003158 516 STQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHR---NLVSLVGYCD-EEGEQMLVYEFMSN 591 (843)
Q Consensus 516 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~---nIv~l~~~~~-~~~~~~lV~e~~~~ 591 (843)
.+.++.|....||+. ++.+++|+.. .......+.+|+++|+.+.+. .+.+.+.++. ..+..++||||++|
T Consensus 24 v~~l~~G~~n~v~~v----g~~~VlR~~~--~~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G 97 (306)
T 3tdw_A 24 VESLGEGFRNYAILV----NGDWVFRFPK--SQQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQG 97 (306)
T ss_dssp EEEEEECSSEEEEEE----TTTEEEEEES--SHHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCS
T ss_pred eeecCCCcceeEEEE----CCEEEEEecC--CchHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCC
Confidence 356788888899987 5678888853 233456789999999999753 3556666663 45678899999999
Q ss_pred CCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcC-------------------------------------------
Q 003158 592 GTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTE------------------------------------------- 628 (843)
Q Consensus 592 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~------------------------------------------- 628 (843)
.++.+..-. .++......++.++++.|..||+.
T Consensus 98 ~~l~~~~~~----~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~l~ 173 (306)
T 3tdw_A 98 QILGEDGMA----VLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDYLT 173 (306)
T ss_dssp EECHHHHHT----TSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHHHH
T ss_pred eECchhhhh----hCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHHHH
Confidence 888663211 122333334444444444444432
Q ss_pred --------------CCCCEEeccCCCCcEEEcC---CCc-EEEeecccccc
Q 003158 629 --------------ADPPVFHRDIKASNILLDH---KFT-AKVADFGLSRL 661 (843)
Q Consensus 629 --------------~~~~iiH~Dlkp~NILl~~---~~~-~kl~DfGla~~ 661 (843)
..+.++|+|+++.||+++. ++. +.|+||+.+..
T Consensus 174 ~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~ 224 (306)
T 3tdw_A 174 LRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI 224 (306)
T ss_dssp HHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred HHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence 2335899999999999997 455 58999998764
No 420
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.32 E-value=3.4e-06 Score=87.87 Aligned_cols=135 Identities=16% Similarity=0.147 Sum_probs=98.6
Q ss_pred cccccCCe-eEEEEEeC-CCcEEEEEEeccCChhhHHHHHHHHHHHHhcc-CCcccceeeeeecCCcEEEEEecCCCCCH
Q 003158 518 QIGQGGYG-KVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLH-HRNLVSLVGYCDEEGEQMLVYEFMSNGTL 594 (843)
Q Consensus 518 ~lg~G~~g-~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~nIv~l~~~~~~~~~~~lV~e~~~~gsL 594 (843)
.+..|..| .||+.... ++..+++|+-... ...++.+|...|+.+. +--+.++++++.+.+..++|||+++|.++
T Consensus 31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~---~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~~ 107 (272)
T 4gkh_A 31 RDNVGQSGATIYRLYGKPNAPELFLKHGKGS---VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKTA 107 (272)
T ss_dssp EEECSSSSCEEEEEECCTTCCCEEEEEEETH---HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEEH
T ss_pred EccCCCcCCeEEEEEecCCCeEEEEEECCCC---CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCccc
Confidence 45556666 68988754 5678899986532 3456788999998884 33467788999888999999999999888
Q ss_pred HHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCC---------------------------------------------
Q 003158 595 RDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEA--------------------------------------------- 629 (843)
Q Consensus 595 ~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~--------------------------------------------- 629 (843)
.+..... ......++.++++.|.-||+..
T Consensus 108 ~~~~~~~------~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (272)
T 4gkh_A 108 FQVLEEY------PDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQVWK 181 (272)
T ss_dssp HHHHHHC------GGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHHHH
T ss_pred cccccCC------HHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHHHH
Confidence 7765321 1233456666777777777421
Q ss_pred ----------CCCEEeccCCCCcEEEcCCCcEEEeecccccc
Q 003158 630 ----------DPPVFHRDIKASNILLDHKFTAKVADFGLSRL 661 (843)
Q Consensus 630 ----------~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~ 661 (843)
.+.++|+|+.+.||++++++.+-|+||+.+..
T Consensus 182 ~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~ 223 (272)
T 4gkh_A 182 EMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGI 223 (272)
T ss_dssp HHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred HHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECccccc
Confidence 12389999999999999887778999998753
No 421
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.23 E-value=9.8e-08 Score=98.44 Aligned_cols=106 Identities=25% Similarity=0.270 Sum_probs=75.3
Q ss_pred cccCCCCCE--EEccCCccc---cCCCcccCCCCCCceeeccCCCCCC--CCCcccCCCCCCcEEEcCCCCCCCCCCCcc
Q 003158 61 FANLNKTRH--FHMNNNSIS---GQIPPELSRLPSLVHMLLDNNNLTG--YLPPELSELPKLLILQLDNNNFEGTTIPAS 133 (843)
Q Consensus 61 ~~~l~~L~~--L~Ls~N~l~---~~~~~~l~~l~~L~~L~L~~N~l~~--~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 133 (843)
|...+.|.. ++++.|... ..++....++++|+.|+|++|+|++ .++..+..+++|+.|+|++|+|++......
T Consensus 137 l~~dp~L~~~~l~l~~N~~~~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~~~l~~ 216 (267)
T 3rw6_A 137 LRSDPDLVAQNIDVVLNRRSCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDK 216 (267)
T ss_dssp GGGCHHHHHTTCCCCTTSHHHHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSGGGGGG
T ss_pred cCCCcchhhcCccccCCHHHHHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCchhhhh
Confidence 444455555 677888543 2222223568899999999999997 345667789999999999999986322233
Q ss_pred ccCCCCCcEEEcCCCCCCCCCCC--------CCCCCCCCEEE
Q 003158 134 YSNMSKLLKLSLRNCSLQGPMPD--------LSRIPNLGYLD 167 (843)
Q Consensus 134 ~~~l~~L~~L~L~~N~l~~~~~~--------~~~l~~L~~L~ 167 (843)
+..+ +|+.|+|++|.+.+..+. +..+++|+.||
T Consensus 217 l~~l-~L~~L~L~~Npl~~~~~~~~~y~~~il~~~P~L~~LD 257 (267)
T 3rw6_A 217 IKGL-KLEELWLDGNSLCDTFRDQSTYISAIRERFPKLLRLD 257 (267)
T ss_dssp GTTS-CCSEEECTTSTTGGGCSSHHHHHHHHHHHCTTCCEES
T ss_pred cccC-CcceEEccCCcCccccCcchhHHHHHHHHCcccCeEC
Confidence 3444 999999999999864331 56789999887
No 422
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=98.16 E-value=4.7e-05 Score=83.41 Aligned_cols=232 Identities=12% Similarity=0.084 Sum_probs=130.3
Q ss_pred cccccCCccccCCCCCCEEEccCCcCCccCccccCCCCCCcEEEcccCcCCccCccccccCCCCCEEEccCCccccCCCc
Q 003158 4 KISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPP 83 (843)
Q Consensus 4 ~i~~~~p~~i~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~ 83 (843)
+++.+-..+|.+. +|+.+.+..+ ++.+...+|.+ .+|+.+.+.++-.. .....|.+. +|+.+.+..+ ++.+...
T Consensus 79 ~v~~Ig~~aF~~c-~l~~i~~~~~-l~~I~~~aF~~-~~L~~i~lp~~~~~-i~~~~F~~~-~l~~~~~~~~-v~~i~~~ 152 (379)
T 4h09_A 79 TVTSIGDGAFADT-KLQSYTGMER-VKKFGDYVFQG-TDLDDFEFPGATTE-IGNYIFYNS-SVKRIVIPKS-VTTIKDG 152 (379)
T ss_dssp TCCEECTTTTTTC-CCCEEEECTT-CCEECTTTTTT-CCCSEEECCTTCCE-ECTTTTTTC-CCCEEEECTT-CCEECSC
T ss_pred cceEechhhhcCC-CCceEECCce-eeEeccceecc-CCcccccCCCcccc-ccccccccc-eeeeeeccce-eeccccc
Confidence 3444445566655 5677766543 44345555554 36777777654322 333334333 4444444332 2223334
Q ss_pred ccCCCCCCceeeccCCC-----------------------------------CCCCCCcccCCCCCCcEEEcCCCCCCCC
Q 003158 84 ELSRLPSLVHMLLDNNN-----------------------------------LTGYLPPELSELPKLLILQLDNNNFEGT 128 (843)
Q Consensus 84 ~l~~l~~L~~L~L~~N~-----------------------------------l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 128 (843)
.|..+.+++.+.+..+. ........+..+..|+.+.+..+--.
T Consensus 153 ~f~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~f~~~~~l~~i~~~~~~~~-- 230 (379)
T 4h09_A 153 IGYKAENLEKIEVSSNNKNYVAENYVLYNKNKTILESYPAAKTGTEFTIPSTVKTVTAYGFSYGKNLKKITITSGVTT-- 230 (379)
T ss_dssp TTTTCTTCCEEEECTTCSSEEEETTEEEETTSSEEEECCTTCCCSEEECCTTCCEECTTTTTTCSSCSEEECCTTCCE--
T ss_pred hhcccccccccccccccceeecccceecccccceeccccccccccccccccceeEEeecccccccccceeeeccceeE--
Confidence 44444444444333221 11122344556677787777655321
Q ss_pred CCCccccCCCCCcEEEcCCCCCCCCCC-CCCCCCCCCEEEcccCcCCCCCCCCCCC--cCcCEEEccCCcCCCCCCcccC
Q 003158 129 TIPASYSNMSKLLKLSLRNCSLQGPMP-DLSRIPNLGYLDLSSNQLNGSIPPGRLS--LNITTIKLSNNKLTGTIPSNFS 205 (843)
Q Consensus 129 ~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~--~~L~~L~Ls~N~l~~~~p~~~~ 205 (843)
.....|.++.+|+.+.+..+ ++.+.. .|..+.+|+.+.+..+ ++ .++...+. .+|+.+.+.++.++.+...+|.
T Consensus 231 i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~-~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~ 307 (379)
T 4h09_A 231 LGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VK-TVPYLLCSGCSNLTKVVMDNSAIETLEPRVFM 307 (379)
T ss_dssp ECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CS-EECTTTTTTCTTCCEEEECCTTCCEECTTTTT
T ss_pred EccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ce-eccccccccccccccccccccccceehhhhhc
Confidence 23456777788888888765 555555 4777788888887654 44 45554443 3788888887777766777888
Q ss_pred CCCCCcEEeCcCccCCCCCCchhhccccCCCCcceeEEcCCCCCCCCC
Q 003158 206 GLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNIS 253 (843)
Q Consensus 206 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~l~~~~L~~L~l~~N~l~~~~ 253 (843)
++.+|+.+.|.++ ++.....+|.++.+|+ .+.+..+ ++.+.
T Consensus 308 ~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~-----~i~ip~~-v~~I~ 348 (379)
T 4h09_A 308 DCVKLSSVTLPTA-LKTIQVYAFKNCKALS-----TISYPKS-ITLIE 348 (379)
T ss_dssp TCTTCCEEECCTT-CCEECTTTTTTCTTCC-----CCCCCTT-CCEEC
T ss_pred CCCCCCEEEcCcc-ccEEHHHHhhCCCCCC-----EEEECCc-cCEEc
Confidence 8888888888654 5544445665554443 4555433 55554
No 423
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.15 E-value=9e-06 Score=88.48 Aligned_cols=140 Identities=14% Similarity=0.157 Sum_probs=89.3
Q ss_pred CCcccccCCeeEEEEEeCCCcEEEEEEeccCChhhHHHHHHHHHHHHhccCCc--ccceeeeeecC-CcEEEEEecCCCC
Q 003158 516 STQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRN--LVSLVGYCDEE-GEQMLVYEFMSNG 592 (843)
Q Consensus 516 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n--Iv~l~~~~~~~-~~~~lV~e~~~~g 592 (843)
.+.++.|....+|+... +++.+++|+.... ..+.+|+.+++.+.... +.++++++... +..++||||++|.
T Consensus 46 i~~l~gG~~n~~y~v~~-~g~~~vlK~~~~~-----~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv~e~l~G~ 119 (362)
T 3ovc_A 46 LMQLSEGEESRAFSFDV-GGRGYVLRVNSCA-----DGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRRAQGV 119 (362)
T ss_dssp EEEEEECSSEEEEEEEE-TTEEEEEEEESCC-----HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEEEECCCSE
T ss_pred EEECCCCCcceEEEEEE-CCcEEEEEeCCch-----hhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEEEEecCCC
Confidence 45688999999999876 5788999987542 25888999999886543 45677776654 6789999999876
Q ss_pred CHHHH------------------HhhcCCC---Ccc------------hhHH---------------------HHHHHHH
Q 003158 593 TLRDQ------------------LSAKSKE---PLG------------FAMR---------------------LSIALGS 618 (843)
Q Consensus 593 sL~~~------------------l~~~~~~---~l~------------~~~~---------------------~~i~~~i 618 (843)
++.+. |+..... .+. |... ......+
T Consensus 120 ~l~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~gl~~~~~~~~~~~~~w~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 199 (362)
T 3ovc_A 120 TLQDLPETELPAVLQPVAEAMDAIAAADLSQTSGFGPFGPQGIGQYTTWRDFICAIADPHVYHWQTVMDDTVSASVAQAL 199 (362)
T ss_dssp ETTTSCGGGSGGGHHHHHHHHHHHHHCCCTTCBCEEEECTTSBEEESSHHHHHHGGGCTTTCCHHHHCCTTTHHHHHHHH
T ss_pred CcccCCHHHHHHHHHHHHHHHHHHhcCCCccccCccCCCCCCCCccccHHHHHHHHHHHHHHHHHHHHhhcccccchHHH
Confidence 55321 1111100 000 0000 0111112
Q ss_pred HHHHHHHhcC-CCCCEEeccCCCCcEEEcCCCcEEEeecccccc
Q 003158 619 SRGILYLHTE-ADPPVFHRDIKASNILLDHKFTAKVADFGLSRL 661 (843)
Q Consensus 619 a~aL~yLH~~-~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~ 661 (843)
...++++... ..+.++|+|+.+.||++++++.+.|+||+.+..
T Consensus 200 ~~l~~~l~~lp~~~~l~HgDl~~~Nil~~~~~~~~viD~~~~~~ 243 (362)
T 3ovc_A 200 DELMLWAEDCPEVRHLVHADFGSNNVLTDNGRITAVIDWSEAMF 243 (362)
T ss_dssp HHHHHHGGGCCCCCEEECSSCSSTTEEEETTEEEEECCCTTCEE
T ss_pred HHHHHHHhhCCCCcEEEeCCCCCCeEEEeCCCEEEEECCccccc
Confidence 2222233211 125589999999999998877888999998864
No 424
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=98.14 E-value=2.7e-06 Score=92.58 Aligned_cols=79 Identities=4% Similarity=-0.014 Sum_probs=55.5
Q ss_pred Ccc-cccCCeeEEEEEeC-------CCcEEEEEEeccCC---hhhHHHHHHHHHHHHhcc-C--CcccceeeeeecC---
Q 003158 517 TQI-GQGGYGKVYKGILP-------DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLH-H--RNLVSLVGYCDEE--- 579 (843)
Q Consensus 517 ~~l-g~G~~g~Vy~~~~~-------~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~-h--~nIv~l~~~~~~~--- 579 (843)
+.| +.|....+|+.... +++.+++|+..... ......+.+|+.+++.+. + -.+.++++++.+.
T Consensus 26 ~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~~ 105 (357)
T 3ats_A 26 SGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDVL 105 (357)
T ss_dssp EEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTTT
T ss_pred EECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCcc
Confidence 567 78888999988754 26788899865422 111245778999888885 3 3567788887655
Q ss_pred CcEEEEEecCCCCCHH
Q 003158 580 GEQMLVYEFMSNGTLR 595 (843)
Q Consensus 580 ~~~~lV~e~~~~gsL~ 595 (843)
+..++||||++|..+.
T Consensus 106 g~~~~v~e~l~G~~l~ 121 (357)
T 3ats_A 106 GTPFFLMDYVEGVVPP 121 (357)
T ss_dssp SSCEEEEECCCCBCCC
T ss_pred CCceEEEEecCCCChh
Confidence 4578999999886654
No 425
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.86 E-value=5.4e-05 Score=83.55 Aligned_cols=75 Identities=16% Similarity=0.080 Sum_probs=49.4
Q ss_pred CCcccccCCeeEEEEEeC-CCcEEEEEEeccCCh-------hhHHHHHHHHHHHHhccC--Cc-ccceeeeeecCCcEEE
Q 003158 516 STQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL-------QGEKEFLTEIQFLSRLHH--RN-LVSLVGYCDEEGEQML 584 (843)
Q Consensus 516 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-------~~~~~~~~E~~~l~~l~h--~n-Iv~l~~~~~~~~~~~l 584 (843)
.+.||.|.++.||++... +++.|+||....... ....++..|.++++.+.. +. +.+++.+ +.+..++
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~l 112 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVT 112 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEE
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEE
Confidence 457899999999999854 468899998653221 122456779998888742 33 3455544 3445689
Q ss_pred EEecCCCC
Q 003158 585 VYEFMSNG 592 (843)
Q Consensus 585 V~e~~~~g 592 (843)
||||+++.
T Consensus 113 vmE~l~g~ 120 (397)
T 2olc_A 113 VMEDLSHL 120 (397)
T ss_dssp EECCCTTS
T ss_pred EEEeCCCc
Confidence 99999763
No 426
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.83 E-value=0.00013 Score=78.57 Aligned_cols=140 Identities=19% Similarity=0.200 Sum_probs=80.2
Q ss_pred CcccccCCeeEEEEEeCCCcEEEEEEeccCChhhHHHHHHHHHHHHhccC--Ccccceee------eeecCCcEEEEEec
Q 003158 517 TQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHH--RNLVSLVG------YCDEEGEQMLVYEF 588 (843)
Q Consensus 517 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h--~nIv~l~~------~~~~~~~~~lV~e~ 588 (843)
+.|+.|..+.||+....+| .+++|+.... ..++..|+++++.+.. -.+.+++. +....+..++||||
T Consensus 38 ~~l~gG~~n~~~~v~~~~~-~~vlk~~~~~----~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~~ 112 (346)
T 2q83_A 38 DVIQGNQMALVWKVHTDSG-AVCLKRIHRP----EKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYDW 112 (346)
T ss_dssp EECC----CEEEEEEETTE-EEEEEEECSC----HHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEEC
T ss_pred eeccccccCcEEEEEeCCC-CEEEEecCCC----HHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEEe
Confidence 3466677889999987655 4889988752 2334456666665531 12334443 12345678999999
Q ss_pred CCCCCHH-----------H---HHhhc-CCC--C---------cchhH-------------------------------H
Q 003158 589 MSNGTLR-----------D---QLSAK-SKE--P---------LGFAM-------------------------------R 611 (843)
Q Consensus 589 ~~~gsL~-----------~---~l~~~-~~~--~---------l~~~~-------------------------------~ 611 (843)
++|.++. + .+|.. ... + ..|.. .
T Consensus 113 i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 192 (346)
T 2q83_A 113 IEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQEI 192 (346)
T ss_dssp CCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHHH
T ss_pred ecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHH
Confidence 9986542 1 11211 000 0 11111 0
Q ss_pred HHHHHHHHHHHHHHhc----------CCCCCEEeccCCCCcEEEcCCCcEEEeecccccc
Q 003158 612 LSIALGSSRGILYLHT----------EADPPVFHRDIKASNILLDHKFTAKVADFGLSRL 661 (843)
Q Consensus 612 ~~i~~~ia~aL~yLH~----------~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~ 661 (843)
..+...+.+++++|+. ...+.++|+|+++.||+++.++.+.|+||+.+..
T Consensus 193 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~~ 252 (346)
T 2q83_A 193 DGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVSF 252 (346)
T ss_dssp HHHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCEE
T ss_pred HHHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhccc
Confidence 0111223446667763 1234599999999999998888999999998753
No 427
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.81 E-value=5.8e-05 Score=79.26 Aligned_cols=79 Identities=19% Similarity=0.235 Sum_probs=57.8
Q ss_pred CCCCCCcccccCCeeEEEEEeCCCcEEEEEEeccCChhhHHHHHHHHHHHHhccCC---cccceeeeeecCCcEEEEEec
Q 003158 512 NFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHR---NLVSLVGYCDEEGEQMLVYEF 588 (843)
Q Consensus 512 ~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~---nIv~l~~~~~~~~~~~lV~e~ 588 (843)
.....+.+|.|..+.||+....||+.|++|+...........|..|++.|+.+.-. -+.+++++. ..++||||
T Consensus 16 ~v~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~----~~~lv~e~ 91 (288)
T 3f7w_A 16 EVAAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEW 91 (288)
T ss_dssp CEEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEEC
T ss_pred CeEEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEecc----CceEEEEe
Confidence 34446778999999999999999999999987654444445678899999888422 344455442 34789999
Q ss_pred CCCCCH
Q 003158 589 MSNGTL 594 (843)
Q Consensus 589 ~~~gsL 594 (843)
++++..
T Consensus 92 l~~~~~ 97 (288)
T 3f7w_A 92 VDERPP 97 (288)
T ss_dssp CCCCCC
T ss_pred ecccCC
Confidence 987654
No 428
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.77 E-value=7.1e-06 Score=78.42 Aligned_cols=83 Identities=18% Similarity=0.140 Sum_probs=44.4
Q ss_pred CCcEEEcccCcCCccCccccccCCCCCEEEccCCc-cccCCCcccCCC----CCCceeeccCCC-CCCCCCcccCCCCCC
Q 003158 42 KLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNS-ISGQIPPELSRL----PSLVHMLLDNNN-LTGYLPPELSELPKL 115 (843)
Q Consensus 42 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~-l~~~~~~~l~~l----~~L~~L~L~~N~-l~~~~~~~~~~l~~L 115 (843)
+|+.|||+++.|+...-..+..+++|+.|+|++|. |+...-..+..+ ++|++|+|++|. |++..-..+..+++|
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~L 141 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRNL 141 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTTC
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCCC
Confidence 45666666665554444445556666666666653 442222223332 356666666653 554333445566666
Q ss_pred cEEEcCCCC
Q 003158 116 LILQLDNNN 124 (843)
Q Consensus 116 ~~L~Ls~N~ 124 (843)
+.|+|+++.
T Consensus 142 ~~L~L~~c~ 150 (176)
T 3e4g_A 142 KYLFLSDLP 150 (176)
T ss_dssp CEEEEESCT
T ss_pred CEEECCCCC
Confidence 666666654
No 429
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.72 E-value=0.00015 Score=76.65 Aligned_cols=137 Identities=16% Similarity=0.141 Sum_probs=91.4
Q ss_pred CCcccccCCeeEEEEEeCCCcEEEEEEeccCChhhHHHHHHHHHHHHhcc---CCcccceeeeeecCCcEEEEEecCCCC
Q 003158 516 STQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLH---HRNLVSLVGYCDEEGEQMLVYEFMSNG 592 (843)
Q Consensus 516 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---h~nIv~l~~~~~~~~~~~lV~e~~~~g 592 (843)
.+.|+.|....+|+... +++.+++|+.... ....+..|.+.|+.+. ...+.++++++...+..++||||+++.
T Consensus 41 ~~~l~gG~~n~~y~v~~-~~~~~vlK~~~~~---~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G~ 116 (312)
T 3jr1_A 41 KEKLYSGEMNEIWLIND-EVQTVFVKINERS---YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNKS 116 (312)
T ss_dssp EEEECCSSSSEEEEEES-SSCEEEEEEEEGG---GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCCC
T ss_pred eEEeCCccceeeeEEEE-CCCeEEEEeCCcc---cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccCC
Confidence 45789999999999886 4677888987642 3557888999998884 356888888888788899999999987
Q ss_pred CHH--------H---HHhhcCC-CC-------------------cchhHHH---HHH----------------HHHH-HH
Q 003158 593 TLR--------D---QLSAKSK-EP-------------------LGFAMRL---SIA----------------LGSS-RG 621 (843)
Q Consensus 593 sL~--------~---~l~~~~~-~~-------------------l~~~~~~---~i~----------------~~ia-~a 621 (843)
.+. + .|+.... .. -+|.... ++. ..+. ..
T Consensus 117 ~~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~~l~~~l 196 (312)
T 3jr1_A 117 KNKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLIVQIV 196 (312)
T ss_dssp CCCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHHHHHHHH
T ss_pred CCCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHH
Confidence 652 1 1232211 10 1232211 011 0111 11
Q ss_pred HHHHhc-CCCCCEEeccCCCCcEEEcCCCcEEEeecc
Q 003158 622 ILYLHT-EADPPVFHRDIKASNILLDHKFTAKVADFG 657 (843)
Q Consensus 622 L~yLH~-~~~~~iiH~Dlkp~NILl~~~~~~kl~DfG 657 (843)
...|.. ...+.++|+|+.+.|++++.++ +.|.|+.
T Consensus 197 ~~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 197 ADTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HHHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred HHHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 233432 2356799999999999999887 8899974
No 430
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.63 E-value=9e-06 Score=77.72 Aligned_cols=82 Identities=9% Similarity=0.106 Sum_probs=35.2
Q ss_pred CCCEEEccCCcCCccCccccCCCCCCcEEEcccCc-CCccCccccccC----CCCCEEEccCCc-cccCCCcccCCCCCC
Q 003158 18 SLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNY-ISGSLPKSFANL----NKTRHFHMNNNS-ISGQIPPELSRLPSL 91 (843)
Q Consensus 18 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~-l~~~~~~~~~~l----~~L~~L~Ls~N~-l~~~~~~~l~~l~~L 91 (843)
+|+.|||++|.|+...-..+.++++|++|+|++|. |++..-..++.+ ++|+.|+|++|. |+...-..+.++++|
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~L 141 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRNL 141 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTTC
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCCC
Confidence 34455555544444434444444555555555442 443222233332 234455554442 442222233444445
Q ss_pred ceeeccCC
Q 003158 92 VHMLLDNN 99 (843)
Q Consensus 92 ~~L~L~~N 99 (843)
+.|+|+++
T Consensus 142 ~~L~L~~c 149 (176)
T 3e4g_A 142 KYLFLSDL 149 (176)
T ss_dssp CEEEEESC
T ss_pred CEEECCCC
Confidence 55554444
No 431
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.50 E-value=0.0004 Score=77.10 Aligned_cols=73 Identities=11% Similarity=0.132 Sum_probs=45.2
Q ss_pred CCcccccCCeeEEEEEeCCCcEEEEEEeccC------C-h--hhHHHHHHHHHHHH-hccCCcccceeeeeecCCcEEEE
Q 003158 516 STQIGQGGYGKVYKGILPDGTVVAVKRAQEG------S-L--QGEKEFLTEIQFLS-RLHHRNLVSLVGYCDEEGEQMLV 585 (843)
Q Consensus 516 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~------~-~--~~~~~~~~E~~~l~-~l~h~nIv~l~~~~~~~~~~~lV 585 (843)
.+.+|.|..+.||++.. +++.++||..... . . .....+..|+..+. ......+.+++.+. .+..++|
T Consensus 39 i~~l~~G~~n~vyrv~~-~~~~~vvK~~~p~~~~~~~~~~~~~~~~~~E~e~l~~~~~~~~~~vP~v~~~~--~~~~~lv 115 (420)
T 2pyw_A 39 IKEVGDGNLNFVFIVVG-SSGSLVIKQALPYIRCIGESWPMTKERAYFEATTLRKHGNLSPDHVPEVYHFD--RTMALIG 115 (420)
T ss_dssp EEECCCSSSCEEEEEEC-SSCEEEEEECCSBCTTTCTTSBCCTTHHHHHHHHHHHHHHHSGGGSCCEEEEE--TTTTEEE
T ss_pred EEEccCCCcEEEEEEEc-CCceEEEEECchhhcccCcccccchhHHHHHHHHHHHHHhhCCCCCCeEEEEC--CCccEEE
Confidence 45689999999999965 5678999943211 1 0 12233444443332 22234566676665 4677999
Q ss_pred EecC-CC
Q 003158 586 YEFM-SN 591 (843)
Q Consensus 586 ~e~~-~~ 591 (843)
|||+ ++
T Consensus 116 ~e~l~~g 122 (420)
T 2pyw_A 116 MRYLEPP 122 (420)
T ss_dssp ECCCCTT
T ss_pred EeecCCc
Confidence 9999 76
No 432
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.40 E-value=3.9e-05 Score=74.69 Aligned_cols=88 Identities=19% Similarity=0.223 Sum_probs=36.7
Q ss_pred ccCCCCCEEEccCCccccCC----CcccCCCCCCceeeccCCCCCCC----CCcccCCCCCCcEEEcCCCC---CCC---
Q 003158 62 ANLNKTRHFHMNNNSISGQI----PPELSRLPSLVHMLLDNNNLTGY----LPPELSELPKLLILQLDNNN---FEG--- 127 (843)
Q Consensus 62 ~~l~~L~~L~Ls~N~l~~~~----~~~l~~l~~L~~L~L~~N~l~~~----~~~~~~~l~~L~~L~Ls~N~---l~~--- 127 (843)
..-+.|+.|+|++|.|+... ...+..-+.|++|+|++|+|... +.+.+..-+.|+.|+|++|. +..
T Consensus 67 ~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ala~aL~~N~tL~~L~L~n~~~~~ig~~g~ 146 (197)
T 1pgv_A 67 CNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLLRSTLVTQSIVEFKADNQRQSVLGNQVE 146 (197)
T ss_dssp TTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHHHHTTTTCCCSEEECCCCSSCCCCHHHH
T ss_pred hhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHHHHHHHhhCCceeEEECCCCcCcCcCHHHH
Confidence 33344455555555444211 12222334455555555555421 11233334445555555432 110
Q ss_pred CCCCccccCCCCCcEEEcCCCC
Q 003158 128 TTIPASYSNMSKLLKLSLRNCS 149 (843)
Q Consensus 128 ~~~~~~~~~l~~L~~L~L~~N~ 149 (843)
..+...+..-+.|+.|+++.|.
T Consensus 147 ~~ia~aL~~N~tL~~L~l~~~~ 168 (197)
T 1pgv_A 147 MDMMMAIEENESLLRVGISFAS 168 (197)
T ss_dssp HHHHHHHHHCSSCCEEECCCCC
T ss_pred HHHHHHHHhCCCcCeEeccCCC
Confidence 0112234444556666665554
No 433
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=97.24 E-value=0.00099 Score=71.34 Aligned_cols=140 Identities=15% Similarity=0.132 Sum_probs=73.5
Q ss_pred CcccccCCee-EEEEEeCCCcEEEEEEeccCChhhHHHHHHHHHHHHhccCC--cccceeeeeecCCcEEEEEecCCCCC
Q 003158 517 TQIGQGGYGK-VYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHR--NLVSLVGYCDEEGEQMLVYEFMSNGT 593 (843)
Q Consensus 517 ~~lg~G~~g~-Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~--nIv~l~~~~~~~~~~~lV~e~~~~gs 593 (843)
+.|+.|+... +|+....+++.+++|....... .++..|+.+++.+... .+.+++.+..+.+ ++|||++.+..
T Consensus 24 ~~l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~~---~~~~~e~~~l~~L~~~g~~vP~v~~~d~~~g--~ll~e~l~~~~ 98 (333)
T 3csv_A 24 TPLAGDASSRRYQRLRSPTGAKAVLMDWSPEEG---GDTQPFVDLAQYLRNLDISAPEIYAEEHARG--LLLIEDLGDAL 98 (333)
T ss_dssp CC--------CCEEEECTTCCEEEEEECCTTTT---CCSHHHHHHHHHHHHTTCBCCCEEEEETTTT--EEEECCCCSCB
T ss_pred eECCCCCCCceEEEEEcCCCCeEEEEECCCCCC---ccccHHHHHHHHHHhCCCCCCceeeecCCCC--EEEEeeCCCcc
Confidence 3455555444 6677654467777886543221 2345577777766422 3456666644333 78999997766
Q ss_pred HHHHHhhc---------------------CC---CCcchhHHH-------H-H------------HHHHHHHHHHHh---
Q 003158 594 LRDQLSAK---------------------SK---EPLGFAMRL-------S-I------------ALGSSRGILYLH--- 626 (843)
Q Consensus 594 L~~~l~~~---------------------~~---~~l~~~~~~-------~-i------------~~~ia~aL~yLH--- 626 (843)
+.+++... .. ..++..... . + ...+.+.++.+.
T Consensus 99 l~~~l~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~~~ 178 (333)
T 3csv_A 99 FTEVINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFAQILSAQ 178 (333)
T ss_dssp HHHHHHHCGGGHHHHHHHHHHHHHHHHTSCCCCCCBCCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHHHHHHHHHH
T ss_pred hHHHhcCCCccHHHHHHHHHHHHHHHhcCCCccCCccCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHhc
Confidence 65443211 00 011111000 0 0 001111222221
Q ss_pred cCCCCCEEeccCCCCcEEEcCC----CcEEEeecccccc
Q 003158 627 TEADPPVFHRDIKASNILLDHK----FTAKVADFGLSRL 661 (843)
Q Consensus 627 ~~~~~~iiH~Dlkp~NILl~~~----~~~kl~DfGla~~ 661 (843)
....+.++|||+.+.||+++.+ +.+.|+||+.+..
T Consensus 179 ~~~~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~ 217 (333)
T 3csv_A 179 LEGDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKL 217 (333)
T ss_dssp CCSCCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEE
T ss_pred ccCCCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCc
Confidence 1123459999999999999875 6899999998864
No 434
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=97.20 E-value=0.0022 Score=68.15 Aligned_cols=157 Identities=13% Similarity=0.119 Sum_probs=87.5
Q ss_pred ccHHHHHHHHcCCCC-----CCcccccCCeeEEEEEeCCCcEEEEEEeccCChhhHHHHHHHHHHHHhccCCc--cccee
Q 003158 501 FTYGEMALATNNFNS-----STQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRN--LVSLV 573 (843)
Q Consensus 501 ~~~~~~~~~~~~~~~-----~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n--Iv~l~ 573 (843)
++.+++.....+|.. .+.|+.|....+|+....+| .+++|+.... ....++..|+.+++.+.... +.+++
T Consensus 7 ~~~~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~--~~~~~l~~e~~~l~~L~~~g~~vP~~~ 83 (322)
T 2ppq_A 7 ITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKD-PLILTLYEKR--VEKNDLPFFLGLMQHLAAKGLSCPLPL 83 (322)
T ss_dssp CCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSC-CEEEEEECC-----CCHHHHHHHHHHHHHHTTCCCCCBC
T ss_pred CCHHHHHHHHHhCCCCcceEeeccCCCcccceEEEEeCCc-cEEEEEeCCC--CCHHHHHHHHHHHHHHHHCCCCCCccc
Confidence 444555555556654 23466788889999987666 5778988652 12234566888877774222 23333
Q ss_pred ee------eecCCcEEEEEecCCCCCHHH--------------HHhhcC---CCC-------cchhHHHH----------
Q 003158 574 GY------CDEEGEQMLVYEFMSNGTLRD--------------QLSAKS---KEP-------LGFAMRLS---------- 613 (843)
Q Consensus 574 ~~------~~~~~~~~lV~e~~~~gsL~~--------------~l~~~~---~~~-------l~~~~~~~---------- 613 (843)
.. ....+..++||+|++|..+.. .++... ..+ ..|.....
T Consensus 84 ~~~~g~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~ 163 (322)
T 2ppq_A 84 PRKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVE 163 (322)
T ss_dssp CBTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTS
T ss_pred CCCCCCEEEEECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhh
Confidence 21 122356789999998865311 112110 000 11211100
Q ss_pred --HHHHHHHHHHHHhcC----CCCCEEeccCCCCcEEEcCCCcEEEeeccccc
Q 003158 614 --IALGSSRGILYLHTE----ADPPVFHRDIKASNILLDHKFTAKVADFGLSR 660 (843)
Q Consensus 614 --i~~~ia~aL~yLH~~----~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~ 660 (843)
+...+.+.++++++. ....++|+|+.+.||+++++..+.|+||+.+.
T Consensus 164 ~~l~~~l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~ 216 (322)
T 2ppq_A 164 KGLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFAC 216 (322)
T ss_dssp TTHHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred hhhHHHHHHHHHHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhcc
Confidence 011134455555532 12359999999999999987666899999775
No 435
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.17 E-value=0.00011 Score=71.60 Aligned_cols=42 Identities=17% Similarity=0.253 Sum_probs=18.7
Q ss_pred cCCCCCCceeeccCCCCCCC----CCcccCCCCCCcEEEcCCCCCC
Q 003158 85 LSRLPSLVHMLLDNNNLTGY----LPPELSELPKLLILQLDNNNFE 126 (843)
Q Consensus 85 l~~l~~L~~L~L~~N~l~~~----~~~~~~~l~~L~~L~Ls~N~l~ 126 (843)
+..-+.|+.|+|++|+|... +.+.+..-+.|++|+|+.|.|.
T Consensus 66 L~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig 111 (197)
T 1pgv_A 66 ACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLT 111 (197)
T ss_dssp HTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCC
T ss_pred HhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCC
Confidence 33444555555555555421 1222223344555555555553
No 436
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=97.00 E-value=0.0085 Score=63.72 Aligned_cols=141 Identities=17% Similarity=0.183 Sum_probs=81.3
Q ss_pred CcccccCCeeEEEEEeCCCcEEEEEEeccCChhhHHHHHHHHHHHHhccCCc--ccceeee-----eecCCcEEEEEecC
Q 003158 517 TQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRN--LVSLVGY-----CDEEGEQMLVYEFM 589 (843)
Q Consensus 517 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n--Iv~l~~~-----~~~~~~~~lV~e~~ 589 (843)
..++ |....||+....+|+.+++|+..... .....+..|..+++.+.... +.+++.. ....+..++||||+
T Consensus 32 ~~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~-~~~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g~~~~l~~~i 109 (328)
T 1zyl_A 32 TPLN-SYENRVYQFQDEDRRRFVVKFYRPER-WTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSV 109 (328)
T ss_dssp EEEC-CSSSEEEEECCTTCCCEEEEEECTTT-SCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECC
T ss_pred Eeec-CcccceEEEEcCCCCEEEEEEcCCCC-CCHHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECCEEEEEEEec
Confidence 3466 78889999887778789999986432 23456777888888774222 3444443 12245668899999
Q ss_pred CCCCHH-----H------H---Hhhc----C---CCCcchhHH----HHH---------------HHHHHHHHHHHhc--
Q 003158 590 SNGTLR-----D------Q---LSAK----S---KEPLGFAMR----LSI---------------ALGSSRGILYLHT-- 627 (843)
Q Consensus 590 ~~gsL~-----~------~---l~~~----~---~~~l~~~~~----~~i---------------~~~ia~aL~yLH~-- 627 (843)
+|..+. . . ++.. . ....++... ..+ ...+.+.++.+.+
T Consensus 110 ~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 189 (328)
T 1zyl_A 110 GGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVTAHW 189 (328)
T ss_dssp CCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHHHHHC
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 875431 1 1 1110 0 011111110 000 1111122223221
Q ss_pred --CCCCCEEeccCCCCcEEEcCCCcEEEeecccccc
Q 003158 628 --EADPPVFHRDIKASNILLDHKFTAKVADFGLSRL 661 (843)
Q Consensus 628 --~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~ 661 (843)
.....++|+|+++.||+++ + .+.|+||+.+..
T Consensus 190 ~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~ 223 (328)
T 1zyl_A 190 REDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARN 223 (328)
T ss_dssp CSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred hhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence 1234489999999999999 4 899999998754
No 437
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=97.00 E-value=0.0015 Score=68.84 Aligned_cols=71 Identities=8% Similarity=0.067 Sum_probs=45.0
Q ss_pred CCcccccCCeeEEEEEeCCCcEEEEEEeccCChhhHHHHHHHHHHHHhccCCcc-cceeeeeecCCcEEEEEecC-CCCC
Q 003158 516 STQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNL-VSLVGYCDEEGEQMLVYEFM-SNGT 593 (843)
Q Consensus 516 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nI-v~l~~~~~~~~~~~lV~e~~-~~gs 593 (843)
.+.|+.|....+|+. +.+++|+........ .+..+|+.+++.+....+ .++++++ .+.-++|+||+ ++.+
T Consensus 23 i~~l~gG~tN~~~~~-----~~~vlR~~~~~~~~~-~~r~~E~~~l~~l~~~g~~P~~~~~~--~~~~~~v~e~i~~g~~ 94 (301)
T 3dxq_A 23 PLERLGGLTNLVFRA-----GDLCLRIPGKGTEEY-INRANEAVAAREAAKAGVSPEVLHVD--PATGVMVTRYIAGAQT 94 (301)
T ss_dssp CEEEESCSSEEEEEE-----TTEEEEEECC----C-CCHHHHHHHHHHHHHTTSSCCEEEEC--TTTCCEEEECCTTCEE
T ss_pred eeEcCCcccccccee-----eeEEEECCCCCccce-eCHHHHHHHHHHHHHcCCCCceEEEE--CCCCEEEEeecCCCcc
Confidence 567889999999998 568888876432111 123468887777753333 4555544 33457899999 6654
Q ss_pred H
Q 003158 594 L 594 (843)
Q Consensus 594 L 594 (843)
+
T Consensus 95 l 95 (301)
T 3dxq_A 95 M 95 (301)
T ss_dssp C
T ss_pred C
Confidence 4
No 438
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=96.97 E-value=0.0021 Score=71.32 Aligned_cols=73 Identities=18% Similarity=0.214 Sum_probs=50.4
Q ss_pred CCcccccCCeeEEEEEeCC--------CcEEEEEEeccCChhhHHHHHHHHHHHHhccCCcc-cceeeeeecCCcEEEEE
Q 003158 516 STQIGQGGYGKVYKGILPD--------GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNL-VSLVGYCDEEGEQMLVY 586 (843)
Q Consensus 516 ~~~lg~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nI-v~l~~~~~~~~~~~lV~ 586 (843)
.+.|+.|....||+....+ ++.+++|+..... ....+.+|..+++.+...++ .++++.+.+ .+|+
T Consensus 78 v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~~--~~~~li~E~~~l~~L~~~g~~P~l~~~~~~----g~v~ 151 (429)
T 1nw1_A 78 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPE--TESHLVAESVIFTLLSERHLGPKLYGIFSG----GRLE 151 (429)
T ss_dssp EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCC--CHHHHHHHHHHHHHHHHTTSSSCEEEEETT----EEEE
T ss_pred EEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCCC--cHHHHHHHHHHHHHHHhCCCCCcEEEEeCC----CEEE
Confidence 3567888889999998753 5789999885321 12355679999888853334 567776643 3899
Q ss_pred ecCCCCCH
Q 003158 587 EFMSNGTL 594 (843)
Q Consensus 587 e~~~~gsL 594 (843)
||++|.++
T Consensus 152 e~l~G~~l 159 (429)
T 1nw1_A 152 EYIPSRPL 159 (429)
T ss_dssp CCCCEEEC
T ss_pred EEeCCccc
Confidence 99986443
No 439
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=96.96 E-value=0.0016 Score=70.85 Aligned_cols=140 Identities=20% Similarity=0.214 Sum_probs=82.3
Q ss_pred CcccccCCeeEEEEEeC--------CCcEEEEEEeccCChhhHHHHHHHHHHHHhcc-CCcccceeeeeecCCcEEEEEe
Q 003158 517 TQIGQGGYGKVYKGILP--------DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLH-HRNLVSLVGYCDEEGEQMLVYE 587 (843)
Q Consensus 517 ~~lg~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~nIv~l~~~~~~~~~~~lV~e 587 (843)
+.+..|-...+|+.... +++.+++|+.... ......+.+|.++++.+. +.-..++++++.+ .+|||
T Consensus 56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~-~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~v~e 130 (379)
T 3feg_A 56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAI-LQGVDSLVLESVMFAILAERSLGPQLYGVFPE----GRLEQ 130 (379)
T ss_dssp EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC----CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EEEEE
T ss_pred EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCc-cchHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----ccEEE
Confidence 45777888889998864 3578999986432 223455678999998885 3333566776654 29999
Q ss_pred cCCCCCHHH--------------HH---hhc----CCCCc-chhHHHHHHHHHHH-------------------HHHH--
Q 003158 588 FMSNGTLRD--------------QL---SAK----SKEPL-GFAMRLSIALGSSR-------------------GILY-- 624 (843)
Q Consensus 588 ~~~~gsL~~--------------~l---~~~----~~~~l-~~~~~~~i~~~ia~-------------------aL~y-- 624 (843)
|++|.+|.. .| +.. ...+. -+.++.++..++.. .+..
T Consensus 131 ~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~ 210 (379)
T 3feg_A 131 YIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNLR 210 (379)
T ss_dssp CCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHHHH
T ss_pred EecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHHHH
Confidence 998765421 11 111 11111 23344444433321 1222
Q ss_pred --HhcC-CCCCEEeccCCCCcEEEcCC----CcEEEeecccccc
Q 003158 625 --LHTE-ADPPVFHRDIKASNILLDHK----FTAKVADFGLSRL 661 (843)
Q Consensus 625 --LH~~-~~~~iiH~Dlkp~NILl~~~----~~~kl~DfGla~~ 661 (843)
|... ....++|+|+.+.||+++.+ +.+.|+||..|..
T Consensus 211 ~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~ 254 (379)
T 3feg_A 211 KLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSY 254 (379)
T ss_dssp HHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEE
T ss_pred HHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCc
Confidence 2222 23459999999999999876 7899999998753
No 440
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=96.60 E-value=0.0075 Score=67.24 Aligned_cols=74 Identities=14% Similarity=-0.003 Sum_probs=48.1
Q ss_pred CCcccccCCeeEEEEEeCC-CcEEEEEEeccCChhhHHHHHHHHHHHHhccCCcc-cceeeeeecCCcEEEEEecCCCCC
Q 003158 516 STQIGQGGYGKVYKGILPD-GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNL-VSLVGYCDEEGEQMLVYEFMSNGT 593 (843)
Q Consensus 516 ~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nI-v~l~~~~~~~~~~~lV~e~~~~gs 593 (843)
.+.|+.|-...+|+....+ +..+++|+....... .-+-.+|..+++.+...++ .++++++.. .+||||++|.+
T Consensus 113 i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~-~idR~~E~~vl~~L~~~gl~P~ll~~~~~----G~v~e~I~G~~ 187 (458)
T 2qg7_A 113 FQIINGGITNILIKVKDMSKQAKYLIRLYGPKTDE-IINREREKKISCILYNKNIAKKIYVFFTN----GRIEEFMDGYA 187 (458)
T ss_dssp EEEECC--CEEEEEEEETTTTEEEEEEEECC-CCS-CSCHHHHHHHHHHHTTSSSBCCEEEEETT----EEEEECCCSEE
T ss_pred EEEcCCCeEeEEEEEEECCCCceEEEEECCCChhh-hcCHHHHHHHHHHHHhcCCCCCEEEEeCC----eEEEEeeCCcc
Confidence 3568888889999998765 578889987542211 1112578888988865444 567777632 35999998754
Q ss_pred H
Q 003158 594 L 594 (843)
Q Consensus 594 L 594 (843)
|
T Consensus 188 l 188 (458)
T 2qg7_A 188 L 188 (458)
T ss_dssp C
T ss_pred C
Confidence 4
No 441
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.54 E-value=0.0037 Score=56.65 Aligned_cols=56 Identities=25% Similarity=0.447 Sum_probs=42.0
Q ss_pred EEEcccCcCC-CCCCCCCCCcCcCEEEccCCcCCCCCCcccCCCCCCcEEeCcCccCC
Q 003158 165 YLDLSSNQLN-GSIPPGRLSLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLS 221 (843)
Q Consensus 165 ~L~Ls~N~l~-~~~p~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 221 (843)
.++.+++.|+ ..+|.. ...+|+.|+|++|+|+.+.+..|..+++|+.|+|++|.+.
T Consensus 12 ~v~Cs~~~L~~~~vP~~-lp~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTA-FPVDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp EEECCSSCCCTTTSCSC-CCTTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred EEEeCCCCCccccCCCC-CCcCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 5666777665 244433 2336888888888888777788899999999999999886
No 442
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=96.42 E-value=0.0029 Score=68.81 Aligned_cols=73 Identities=14% Similarity=0.105 Sum_probs=44.3
Q ss_pred CcccccCCeeEEEEEeCC---------CcEEEEEEeccCChhhHHHHHHHHHHHHhccCCc-ccceeeeeecCCcEEEEE
Q 003158 517 TQIGQGGYGKVYKGILPD---------GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRN-LVSLVGYCDEEGEQMLVY 586 (843)
Q Consensus 517 ~~lg~G~~g~Vy~~~~~~---------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n-Iv~l~~~~~~~~~~~lV~ 586 (843)
..++.|....+|+....+ ++.+++|+....... ..+...|.++++.+.... ..++++... -++||
T Consensus 39 ~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~~-~~~~~~E~~~l~~L~~~g~~P~~~~~~~----~~~v~ 113 (369)
T 3c5i_A 39 KQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVDE-LYNTISEFEVYKTMSKYKIAPQLLNTFN----GGRIE 113 (369)
T ss_dssp EEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGGG-TSCHHHHHHHHHHHHHTTSSCCEEEEET----TEEEE
T ss_pred EEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCccc-eecHHHHHHHHHHHHhcCCCCceEEecC----CcEEE
Confidence 457788888999988654 268889987643211 112357888888875333 346665542 37899
Q ss_pred ecCCCCCH
Q 003158 587 EFMSNGTL 594 (843)
Q Consensus 587 e~~~~gsL 594 (843)
||++|.++
T Consensus 114 e~i~G~~l 121 (369)
T 3c5i_A 114 EWLYGDPL 121 (369)
T ss_dssp ECCCSEEC
T ss_pred EEecCCcC
Confidence 99987543
No 443
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=96.29 E-value=0.028 Score=60.10 Aligned_cols=68 Identities=10% Similarity=0.080 Sum_probs=44.0
Q ss_pred cccCCeeEEEEEeCCCcEEEEEEeccCChhhHHHHHHHHHHHHhcc---CCcccceeee------eecCCcEEEEEecCC
Q 003158 520 GQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLH---HRNLVSLVGY------CDEEGEQMLVYEFMS 590 (843)
Q Consensus 520 g~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---h~nIv~l~~~------~~~~~~~~lV~e~~~ 590 (843)
|.|....||+....+| .+++|+...... ..|+.+++.+. -+.+.+.+.. ....+..++||+|++
T Consensus 32 G~g~~N~vy~v~~~~g-~~vLK~~~~~~~------~~E~~~l~~L~~~g~~~vp~pi~~~~G~~~~~~~g~~~~l~~~i~ 104 (339)
T 3i1a_A 32 GADTNAFAYQADSESK-SYFIKLKYGYHD------EINLSIIRLLHDSGIKEIIFPIHTLEAKLFQQLKHFKIIAYPFIH 104 (339)
T ss_dssp TSCSSCEEEEEECSSC-EEEEEEEECSSC------CHHHHHHHHHHHTTCCSSCCCCCCTTSCSSEECSSEEEEEEECCC
T ss_pred cCccccceEEEEeCCC-CEEEEEecCccc------hHHHHHHHHHHhcCCcccccceecCCCCEEEEECCEEEEEEeccC
Confidence 3444678999987777 899998775432 34556665553 1224444432 233567899999999
Q ss_pred CCCH
Q 003158 591 NGTL 594 (843)
Q Consensus 591 ~gsL 594 (843)
|..+
T Consensus 105 G~~~ 108 (339)
T 3i1a_A 105 APNG 108 (339)
T ss_dssp CCBT
T ss_pred CCcC
Confidence 8765
No 444
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=95.95 E-value=0.029 Score=61.11 Aligned_cols=140 Identities=19% Similarity=0.165 Sum_probs=81.8
Q ss_pred CcccccCCeeEEEEEeCC--------CcEEEEEEeccCChh-----------hH-------HHHHHHHHHHHhcc-CCcc
Q 003158 517 TQIGQGGYGKVYKGILPD--------GTVVAVKRAQEGSLQ-----------GE-------KEFLTEIQFLSRLH-HRNL 569 (843)
Q Consensus 517 ~~lg~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~-----------~~-------~~~~~E~~~l~~l~-h~nI 569 (843)
+.|..|-...+|+...++ ++.|.+++....... .. .....|..+++.+. +--.
T Consensus 58 ~~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~~~Gi~ 137 (401)
T 3f2s_A 58 SVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERSLG 137 (401)
T ss_dssp EEEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHHHHTTSS
T ss_pred EEcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHHHhcCCC
Confidence 456667778899988753 367888887543210 01 12335888888885 4345
Q ss_pred cceeeeeecCCcEEEEEecCCCCCHHH--------------HH---hhcC----CCCc-chhHHHHHHHHHH--------
Q 003158 570 VSLVGYCDEEGEQMLVYEFMSNGTLRD--------------QL---SAKS----KEPL-GFAMRLSIALGSS-------- 619 (843)
Q Consensus 570 v~l~~~~~~~~~~~lV~e~~~~gsL~~--------------~l---~~~~----~~~l-~~~~~~~i~~~ia-------- 619 (843)
.++++++... +|+||++|.+|.. .+ |... ..+. -+....++..++.
T Consensus 138 Pkl~~~~~~G----~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~~ 213 (401)
T 3f2s_A 138 PKLYGIFPQG----RLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLRIKFTEES 213 (401)
T ss_dssp CCEEEEETTE----EEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSHH
T ss_pred CeEEEEeCCC----eEEEecCCccCCHHHHhhHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHHHHHHHhccCcchh
Confidence 5777776532 8999998755421 11 1110 1111 1223333332221
Q ss_pred --------------HHH----HHHhcC-CCCCEEeccCCCCcEEEcCC------CcEEEeeccccc
Q 003158 620 --------------RGI----LYLHTE-ADPPVFHRDIKASNILLDHK------FTAKVADFGLSR 660 (843)
Q Consensus 620 --------------~aL----~yLH~~-~~~~iiH~Dlkp~NILl~~~------~~~kl~DfGla~ 660 (843)
+-+ ++|... ....++|+|+.+.||+++.+ +.+.++||..|.
T Consensus 214 ~~~~~~~~~~~~l~~e~~~l~~~l~~~~~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~ 279 (401)
T 3f2s_A 214 RIKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS 279 (401)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCE
T ss_pred hhhhhhhhhhHHHHHHHHHHHHHHhhcCCCeeEEeccCCcccEEEcCCcccCcccceEEEeeccCC
Confidence 112 223332 23358999999999999887 789999999875
No 445
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=95.69 E-value=0.0015 Score=70.09 Aligned_cols=59 Identities=14% Similarity=0.200 Sum_probs=40.4
Q ss_pred ccCCCCCCCHHHHHHHHHHhhhhCC----CCCCCCCccccCCCCCCCCCCCCCccCCCCCcccCC
Q 003158 766 QDETDARPSMSEVMRELESIWNMMP----ESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSSD 826 (843)
Q Consensus 766 ~~~p~~RPs~~~vl~~L~~~~~~~~----~~~~~~~dll~~~L~~dp~~R~sa~e~L~Hp~f~~~ 826 (843)
-..|-...+..+++..+..- .++ ..++.+.+||.+||+.||++|+|++|+|+||||+..
T Consensus 221 G~~PF~~~~~~~~~~~i~~~--~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~hp~~~~~ 283 (350)
T 4b9d_A 221 LKHAFEAGSMKNLVLKIISG--SFPPVSLHYSYDLRSLVSQLFKRNPRDRPSVNSILEKGFIAKR 283 (350)
T ss_dssp SSCSCCCSSHHHHHHHHHHT--CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSHHHHTT
T ss_pred CCCCCCCcCHHHHHHHHHcC--CCCCCCccCCHHHHHHHHHHccCChhHCcCHHHHhcCHHhhcC
Confidence 34455555565555443321 122 223445689999999999999999999999999754
No 446
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=95.56 E-value=0.002 Score=66.73 Aligned_cols=63 Identities=13% Similarity=0.268 Sum_probs=43.9
Q ss_pred ccCCCCCCCHHHHHHHHHHhhhhCCC-CCCCCCccccCCCCCCCCCCCCCccCCCCCcccCCCC
Q 003158 766 QDETDARPSMSEVMRELESIWNMMPE-SDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSSDVS 828 (843)
Q Consensus 766 ~~~p~~RPs~~~vl~~L~~~~~~~~~-~~~~~~dll~~~L~~dp~~R~sa~e~L~Hp~f~~~~~ 828 (843)
...|-...+..+..+.+......++. ......+++.+||..||++|||++|+++||||++...
T Consensus 203 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~h~~~~~~~~ 266 (279)
T 3fdn_A 203 GKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSS 266 (279)
T ss_dssp SSCTTCCSSHHHHHHHHHHTCCCCCTTSCHHHHHHHHHHCCSSGGGSCCHHHHHHCHHHHHHCS
T ss_pred CCCCCCCCcHHHHHHHHHhCCCCCCCcCCHHHHHHHHHHhccChhhCCCHHHHhhCccccCCcc
Confidence 34455555666666655554333332 2333568999999999999999999999999976544
No 447
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=95.48 E-value=0.085 Score=51.54 Aligned_cols=100 Identities=15% Similarity=0.158 Sum_probs=65.6
Q ss_pred CCHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcEEEcCCCcEEEeeccccccCCCCCCCCcc
Q 003158 592 GTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIV 671 (843)
Q Consensus 592 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~ 671 (843)
-+|.+.|+.. ..++++.++|.++.|.+.+|.-+-.+..+ ..+=+.|..|++..+|.|.+.+ +.+.
T Consensus 33 vSL~eIL~~~-~~PlsEEqaWALc~Qc~~~L~~~~~~~~~--~~~i~~~~~i~l~~dG~V~f~~-~~s~----------- 97 (229)
T 2yle_A 33 LSLEEILRLY-NQPINEEQAWAVCYQCCGSLRAAARRRQP--RHRVRSAAQIRVWRDGAVTLAP-AADD----------- 97 (229)
T ss_dssp EEHHHHHHHH-TSCCCHHHHHHHHHHHHHHHHHHHHTTCC--CCCCCSGGGEEEETTSCEEECC-C--------------
T ss_pred ccHHHHHHHc-CCCcCHHHHHHHHHHHHHHHHhhhhcccC--CceecCCcceEEecCCceeccc-cccc-----------
Confidence 3799999765 45899999999999999988776221111 1223446899999999998874 2111
Q ss_pred cceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhC
Q 003158 672 PAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTG 715 (843)
Q Consensus 672 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg 715 (843)
.....+.|||... ...+.+.=|||+|+++|.-+--
T Consensus 98 --------~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDy 132 (229)
T 2yle_A 98 --------AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALDY 132 (229)
T ss_dssp -----------------CCSS-SSSCHHHHHHHHHHHHHHHHTT
T ss_pred --------ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhc
Confidence 0122466888763 3456788999999999998863
No 448
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=94.82 E-value=0.0026 Score=65.69 Aligned_cols=63 Identities=6% Similarity=0.106 Sum_probs=42.3
Q ss_pred ccCCCCCCCHHHHHHHHHHhhhhCCC-CCCCCCccccCCCCCCCCCCCCCccCCCCCcccCCCC
Q 003158 766 QDETDARPSMSEVMRELESIWNMMPE-SDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSSDVS 828 (843)
Q Consensus 766 ~~~p~~RPs~~~vl~~L~~~~~~~~~-~~~~~~dll~~~L~~dp~~R~sa~e~L~Hp~f~~~~~ 828 (843)
...|-......++.+.+..-....+. .+....+++.+||..||++|||++|+++||||+.+..
T Consensus 207 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~l~h~~~~~~~~ 270 (276)
T 2h6d_A 207 GTLPFDDEHVPTLFKKIRGGVFYIPEYLNRSVATLLMHMLQVDPLKRATIKDIREHEWFKQDLP 270 (276)
T ss_dssp SSCSSCCSSHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHSHHHHTTCC
T ss_pred CCCCCCCCcHHHHHHHhhcCcccCchhcCHHHHHHHHHHccCChhhCCCHHHHHhChhhccCch
Confidence 34454445555555544432222222 2334567999999999999999999999999987643
No 449
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=94.56 E-value=0.1 Score=57.29 Aligned_cols=73 Identities=12% Similarity=0.089 Sum_probs=47.5
Q ss_pred CcccccCCeeEEEEEeCC--------CcEEEEEEeccCChhhHHHHHHHHHHHHhccCCc-ccceeeeeecCCcEEEEEe
Q 003158 517 TQIGQGGYGKVYKGILPD--------GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRN-LVSLVGYCDEEGEQMLVYE 587 (843)
Q Consensus 517 ~~lg~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n-Iv~l~~~~~~~~~~~lV~e 587 (843)
+.+..|-...+|+....+ ++.+++|+..... ...-+..+|.++++.+.-.. ..++++.+. -++|||
T Consensus 76 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t-~~~idR~~E~~~l~~L~~~gi~P~l~~~~~----~~~I~e 150 (424)
T 3mes_A 76 KQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHV-GKFYDSKVELDVFRYLSNINIAPNIIADFP----EGRIEE 150 (424)
T ss_dssp EEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC--CCCCHHHHHHHHHHHHHTTSSCCEEEEET----TEEEEE
T ss_pred EEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCc-chhcCHHHHHHHHHHHHhcCCCCCEEEEcC----CCEEEE
Confidence 456778888999998753 5789999875432 11112356888888875322 345565442 278999
Q ss_pred cCCCCCH
Q 003158 588 FMSNGTL 594 (843)
Q Consensus 588 ~~~~gsL 594 (843)
|++|.+|
T Consensus 151 fI~G~~l 157 (424)
T 3mes_A 151 FIDGEPL 157 (424)
T ss_dssp CCCSEEC
T ss_pred EeCCccC
Confidence 9998654
No 450
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=94.43 E-value=0.021 Score=38.81 Aligned_cols=27 Identities=22% Similarity=0.560 Sum_probs=19.8
Q ss_pred CCCCCccceeehhHHHHHHHHHHHHHH
Q 003158 441 NSGISKAALAGIILGAIAGAVTISAIV 467 (843)
Q Consensus 441 ~~~~~~~~~~~ii~g~~~~~~~~~~~~ 467 (843)
+++.+..+++||++|++++++++.+++
T Consensus 5 ~~~ls~GaIAGiVvG~v~gv~li~~l~ 31 (38)
T 2k1k_A 5 SRGLTGGEIVAVIFGLLLGAALLLGIL 31 (38)
T ss_dssp STTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCceeeeehHHHHHHHHHHHHH
Confidence 345677889999999888777665544
No 451
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=94.27 E-value=0.0084 Score=62.16 Aligned_cols=13 Identities=23% Similarity=0.102 Sum_probs=5.6
Q ss_pred cCCCCCCCHHHHH
Q 003158 767 DETDARPSMSEVM 779 (843)
Q Consensus 767 ~~p~~RPs~~~vl 779 (843)
..|-..++..+..
T Consensus 209 ~~pf~~~~~~~~~ 221 (284)
T 2vgo_A 209 MPPFDSPSHTETH 221 (284)
T ss_dssp SCTTCCSSHHHHH
T ss_pred CCCCCCCCHhHHH
Confidence 3444444444443
No 452
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=94.07 E-value=0.0084 Score=62.83 Aligned_cols=63 Identities=5% Similarity=0.044 Sum_probs=41.9
Q ss_pred ccCCCCCCCHHHHHHHHHHhhhhCC-CCCCCCCccccCCCCCCCCCCCCCccCCCCCcccCCCC
Q 003158 766 QDETDARPSMSEVMRELESIWNMMP-ESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSSDVS 828 (843)
Q Consensus 766 ~~~p~~RPs~~~vl~~L~~~~~~~~-~~~~~~~dll~~~L~~dp~~R~sa~e~L~Hp~f~~~~~ 828 (843)
...|....+..++.+.+..-....+ ...+...+++.+||..||++|||++|+++||||.....
T Consensus 209 g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~~~~~~~~ 272 (305)
T 2wtk_C 209 GLYPFEGDNIYKLFENIGKGSYAIPGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQHSWFRKKHP 272 (305)
T ss_dssp SSCSCCCSSHHHHHHHHHHCCCCCCSSSCHHHHHHHHHHTCSSTTTSCCHHHHHHSHHHHSCCC
T ss_pred CCCCCCCchHHHHHHHHhcCCCCCCCccCHHHHHHHHHHccCChhhCCCHHHHhcCcccccCCC
Confidence 3345444455555554443221122 22334568999999999999999999999999977554
No 453
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=93.76 E-value=0.0076 Score=64.47 Aligned_cols=12 Identities=0% Similarity=-0.125 Sum_probs=4.6
Q ss_pred CCCCCCCHHHHH
Q 003158 768 ETDARPSMSEVM 779 (843)
Q Consensus 768 ~p~~RPs~~~vl 779 (843)
.|-...+..+..
T Consensus 274 ~pf~~~~~~~~~ 285 (345)
T 3hko_A 274 VPFPGVNDADTI 285 (345)
T ss_dssp CSSCCSSHHHHH
T ss_pred CCCCCCChHHHH
Confidence 343333444333
No 454
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=93.31 E-value=0.01 Score=61.87 Aligned_cols=31 Identities=10% Similarity=0.223 Sum_probs=28.1
Q ss_pred CCccccCCCCCCCCCCCCCccCCCCCcccCC
Q 003158 796 TPEFINSEHTSKEETPPSSSSMLKHPYVSSD 826 (843)
Q Consensus 796 ~~dll~~~L~~dp~~R~sa~e~L~Hp~f~~~ 826 (843)
..+++.+||..||++|||++|+++||||...
T Consensus 260 ~~~li~~~l~~dp~~Rps~~~ll~h~~~~~~ 290 (303)
T 1zy4_A 260 EKKIIRLLIDHDPNKRPGARTLLNSGWLPVK 290 (303)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHSSCSCCC
T ss_pred HHHHHHHHHhcCcccCcCHHHHhCCCCcCCC
Confidence 3578999999999999999999999999764
No 455
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=93.31 E-value=0.0044 Score=65.00 Aligned_cols=32 Identities=25% Similarity=0.226 Sum_probs=29.4
Q ss_pred CHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 003158 750 PSECVEKFIKLALKCCQDETDARPSMSEVMRE 781 (843)
Q Consensus 750 ~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~ 781 (843)
...+++++.+++.+||+.+|.+||++.++++.
T Consensus 226 ~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~h 257 (299)
T 3m2w_A 226 WSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH 257 (299)
T ss_dssp HTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred cccCCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 48899999999999999999999999998753
No 456
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=92.97 E-value=0.0074 Score=64.00 Aligned_cols=28 Identities=4% Similarity=0.238 Sum_probs=22.9
Q ss_pred ccccCCCCCCCCCCCCCccCCCCCcccC
Q 003158 798 EFINSEHTSKEETPPSSSSMLKHPYVSS 825 (843)
Q Consensus 798 dll~~~L~~dp~~R~sa~e~L~Hp~f~~ 825 (843)
+++.+||..||++|||++|+|+||||++
T Consensus 304 ~li~~~l~~~p~~Rps~~~~l~~~~f~~ 331 (332)
T 3qd2_B 304 MMVQDMLSPSPTERPEATDIIENAIFEN 331 (332)
T ss_dssp HHHHHHHCSSGGGSCCHHHHHHSTTCCC
T ss_pred HHHHHHccCCCCcCCCHHHHhhchhhhc
Confidence 4666677788888889999999999975
No 457
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=92.61 E-value=0.0076 Score=63.01 Aligned_cols=34 Identities=24% Similarity=0.471 Sum_probs=30.1
Q ss_pred CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 003158 748 SYPSECVEKFIKLALKCCQDETDARPSMSEVMRE 781 (843)
Q Consensus 748 ~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~ 781 (843)
.....++..+.+++.+||+.+|.+||++.++++.
T Consensus 255 ~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 288 (303)
T 2vwi_A 255 EMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRH 288 (303)
T ss_dssp CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred hhhhhhhHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence 3467788999999999999999999999998753
No 458
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=92.50 E-value=0.04 Score=57.80 Aligned_cols=34 Identities=21% Similarity=0.446 Sum_probs=30.3
Q ss_pred CCCccccCCCCCCCCCCCCCccCCCCCcccCCCC
Q 003158 795 KTPEFINSEHTSKEETPPSSSSMLKHPYVSSDVS 828 (843)
Q Consensus 795 ~~~dll~~~L~~dp~~R~sa~e~L~Hp~f~~~~~ 828 (843)
.+.+++.+||..||++|||++|+++||||.+...
T Consensus 254 ~l~~li~~~l~~dp~~Rpt~~~ll~~~~~~~~~~ 287 (314)
T 3com_A 254 NFTDFVKQCLVKSPEQRATATQLLQHPFVRSAKG 287 (314)
T ss_dssp HHHHHHHHHTCSCTTTSCCHHHHTTSHHHHTCCC
T ss_pred HHHHHHHHHccCChhhCcCHHHHHhCHHHhcCCc
Confidence 3457999999999999999999999999987654
No 459
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=92.37 E-value=0.017 Score=59.97 Aligned_cols=33 Identities=15% Similarity=0.282 Sum_probs=29.2
Q ss_pred CCCCccccCCCCCCCCCCCCCccCCCCCcccCC
Q 003158 794 TKTPEFINSEHTSKEETPPSSSSMLKHPYVSSD 826 (843)
Q Consensus 794 ~~~~dll~~~L~~dp~~R~sa~e~L~Hp~f~~~ 826 (843)
....+++.+||..||++|||++|+|+||||...
T Consensus 251 ~~~~~li~~~l~~dp~~Rps~~ell~hp~~~~~ 283 (287)
T 2wei_A 251 DDAKDLIRKMLTFHPSLRITATQCLEHPWIQKY 283 (287)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHHSHHHHHH
T ss_pred HHHHHHHHHHcccChhhCcCHHHHhcCHHHhcc
Confidence 345679999999999999999999999999753
No 460
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=91.98 E-value=0.022 Score=59.18 Aligned_cols=30 Identities=10% Similarity=0.231 Sum_probs=21.5
Q ss_pred ccccCCCCCCCCCCCCCccCCCCCcccCCC
Q 003158 798 EFINSEHTSKEETPPSSSSMLKHPYVSSDV 827 (843)
Q Consensus 798 dll~~~L~~dp~~R~sa~e~L~Hp~f~~~~ 827 (843)
+++.+||..||++|||++|+|+||||....
T Consensus 257 ~li~~~l~~dp~~Rps~~~ll~~~~~~~~~ 286 (295)
T 2clq_A 257 AFILKCFEPDPDKRACANDLLVDEFLKVSS 286 (295)
T ss_dssp HHHHHTTCSSTTTSCCHHHHHTSGGGCC--
T ss_pred HHHHHHccCChhhCCCHHHHhcChhhhhcc
Confidence 455666777777888888888899987644
No 461
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=91.90 E-value=0.015 Score=62.18 Aligned_cols=33 Identities=18% Similarity=0.302 Sum_probs=29.2
Q ss_pred CCCccccCCCCCCCCCCCCCccCCCCCcccCCC
Q 003158 795 KTPEFINSEHTSKEETPPSSSSMLKHPYVSSDV 827 (843)
Q Consensus 795 ~~~dll~~~L~~dp~~R~sa~e~L~Hp~f~~~~ 827 (843)
.+.+++.+||..||++|||++|+|+||||+...
T Consensus 249 ~l~~li~~~L~~dp~~Rpt~~e~l~hp~~~~~~ 281 (343)
T 3dbq_A 249 DLQDVLKCCLKRDPKQRISIPELLAHPYVQIQT 281 (343)
T ss_dssp HHHHHHHHHTCSSTTTSCCHHHHHTSHHHHSCC
T ss_pred HHHHHHHHHcCCChhHCCCHHHHHhCccccccC
Confidence 356799999999999999999999999997543
No 462
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=91.81 E-value=0.017 Score=61.68 Aligned_cols=30 Identities=13% Similarity=0.302 Sum_probs=21.0
Q ss_pred ccccCCCCCCCCCCCCCccCCCCCcccCCC
Q 003158 798 EFINSEHTSKEETPPSSSSMLKHPYVSSDV 827 (843)
Q Consensus 798 dll~~~L~~dp~~R~sa~e~L~Hp~f~~~~ 827 (843)
+++.+||..||++|||++|+++||||+...
T Consensus 253 ~li~~~L~~dP~~Rps~~ell~hp~~~~~~ 282 (335)
T 3dls_A 253 SLVSGLLQPVPERRTTLEKLVTDPWVTQPV 282 (335)
T ss_dssp HHHHHHTCSSGGGSCCHHHHHHCTTTTCCC
T ss_pred HHHHHHccCChhhCcCHHHHhcCccccCCc
Confidence 455566667777777777788888886643
No 463
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=91.51 E-value=0.012 Score=62.00 Aligned_cols=36 Identities=17% Similarity=0.286 Sum_probs=29.5
Q ss_pred CCCCCccccCCCCCCCCCCCCCccCCCCCcccCCCC
Q 003158 793 DTKTPEFINSEHTSKEETPPSSSSMLKHPYVSSDVS 828 (843)
Q Consensus 793 ~~~~~dll~~~L~~dp~~R~sa~e~L~Hp~f~~~~~ 828 (843)
.....+++.+||..||++|||++|+++||||.....
T Consensus 257 ~~~~~~li~~~l~~~p~~Rps~~e~l~~~~~~~~~~ 292 (312)
T 2iwi_A 257 SPDCCALIRRCLAPKPSSRPSLEEILLDPWMQTPAE 292 (312)
T ss_dssp CHHHHHHHHHHTCSSTTTSCCHHHHHHSTTTCC---
T ss_pred CHHHHHHHHHHccCChhhCcCHHHHhcChhhcCchh
Confidence 344567999999999999999999999999987543
No 464
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=91.32 E-value=0.26 Score=34.51 Aligned_cols=18 Identities=17% Similarity=0.303 Sum_probs=8.1
Q ss_pred cceeehhHHHHHHHHHHH
Q 003158 447 AALAGIILGAIAGAVTIS 464 (843)
Q Consensus 447 ~~~~~ii~g~~~~~~~~~ 464 (843)
.++++.++|.++++++++
T Consensus 11 ~~IA~gVVgGv~~~~ii~ 28 (44)
T 2ks1_B 11 PSIATGMVGALLLLLVVA 28 (44)
T ss_dssp SSSTHHHHHHHHHHHHHH
T ss_pred ceEEeehhHHHHHHHHHH
Confidence 345555554444444333
No 465
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=91.26 E-value=0.019 Score=60.48 Aligned_cols=31 Identities=19% Similarity=0.329 Sum_probs=21.8
Q ss_pred ccccCCCCCCCCCCCCCccCCCCCcccCCCC
Q 003158 798 EFINSEHTSKEETPPSSSSMLKHPYVSSDVS 828 (843)
Q Consensus 798 dll~~~L~~dp~~R~sa~e~L~Hp~f~~~~~ 828 (843)
+++.+||..||++|||++|+|+||||+....
T Consensus 271 ~li~~~l~~dp~~Rps~~ell~h~~~~~~~~ 301 (313)
T 3cek_A 271 DVLKCCLKRDPKQRISIPELLAHPYVQIQTH 301 (313)
T ss_dssp HHHHHHTCSSTTTSCCHHHHHTSHHHHCC--
T ss_pred HHHHHHccCCcccCcCHHHHhcCccccCCCC
Confidence 4555667777777888888888999876543
No 466
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=90.95 E-value=0.19 Score=35.05 Aligned_cols=17 Identities=18% Similarity=0.278 Sum_probs=6.9
Q ss_pred ceeehhHHHHHHHHHHH
Q 003158 448 ALAGIILGAIAGAVTIS 464 (843)
Q Consensus 448 ~~~~ii~g~~~~~~~~~ 464 (843)
++++.++|.++++++++
T Consensus 11 aIA~gVVgGv~~v~ii~ 27 (44)
T 2l2t_A 11 LIAAGVIGGLFILVIVG 27 (44)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred eEEEeehHHHHHHHHHH
Confidence 34444444433333333
No 467
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=90.84 E-value=0.018 Score=61.42 Aligned_cols=31 Identities=16% Similarity=0.437 Sum_probs=23.0
Q ss_pred ccccCCCCCCCCCCCCCccCCCCCcccCCCC
Q 003158 798 EFINSEHTSKEETPPSSSSMLKHPYVSSDVS 828 (843)
Q Consensus 798 dll~~~L~~dp~~R~sa~e~L~Hp~f~~~~~ 828 (843)
+++.+||..||++|||++|+++||||+....
T Consensus 289 ~li~~~l~~dp~~Rps~~ell~hp~f~~~~~ 319 (340)
T 3an0_A 289 DFTSQCLKKNSKERPTYPELMQHPFFTLHES 319 (340)
T ss_dssp HHHHHHTCSSGGGSCCHHHHTTSHHHHHHTT
T ss_pred HHHHHHccCCcccCcCHHHHhcCcCcccccc
Confidence 4555667777788888888999999965444
No 468
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=90.69 E-value=0.024 Score=61.90 Aligned_cols=33 Identities=18% Similarity=0.302 Sum_probs=29.2
Q ss_pred CCCccccCCCCCCCCCCCCCccCCCCCcccCCC
Q 003158 795 KTPEFINSEHTSKEETPPSSSSMLKHPYVSSDV 827 (843)
Q Consensus 795 ~~~dll~~~L~~dp~~R~sa~e~L~Hp~f~~~~ 827 (843)
.+.+++.+||..||++|||++|+|+||||....
T Consensus 296 ~~~~li~~~L~~dP~~Rps~~ell~hp~~~~~~ 328 (390)
T 2zmd_A 296 DLQDVLKCCLKRDPKQRISIPELLAHPYVQIQT 328 (390)
T ss_dssp HHHHHHHHHTCSSTTTSCCHHHHHTSHHHHSCC
T ss_pred HHHHHHHHHcccChhhCCCHHHHhhCcCccccC
Confidence 356799999999999999999999999997543
No 469
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=90.68 E-value=0.019 Score=60.67 Aligned_cols=31 Identities=23% Similarity=0.554 Sum_probs=23.7
Q ss_pred ccccCCCCCCCCCCCCCccCCCCCcccCCCC
Q 003158 798 EFINSEHTSKEETPPSSSSMLKHPYVSSDVS 828 (843)
Q Consensus 798 dll~~~L~~dp~~R~sa~e~L~Hp~f~~~~~ 828 (843)
+++.+||..||++|||++|+++||||+....
T Consensus 265 ~li~~~l~~dp~~Rps~~~ll~hp~~~~~~~ 295 (326)
T 2x7f_A 265 SFIESCLVKNHSQRPATEQLMKHPFIRDQPN 295 (326)
T ss_dssp HHHHHHCCSSGGGSCCHHHHHTSHHHHCCTT
T ss_pred HHHHHHhccChhhCCCHHHHhhChHHhhCcc
Confidence 4566677777888888888999999976543
No 470
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=90.53 E-value=0.055 Score=55.63 Aligned_cols=62 Identities=16% Similarity=0.130 Sum_probs=41.3
Q ss_pred cCCCCCCCHHHHHHHHHHhhh-hCC-CCCCCCCccccCCCCCCCCCCCCCccCCCCCcccCCCC
Q 003158 767 DETDARPSMSEVMRELESIWN-MMP-ESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSSDVS 828 (843)
Q Consensus 767 ~~p~~RPs~~~vl~~L~~~~~-~~~-~~~~~~~dll~~~L~~dp~~R~sa~e~L~Hp~f~~~~~ 828 (843)
..|..-.+..++...+..-.. ..+ .......+++.+||..||++|||++|+++|+|+.+...
T Consensus 213 ~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~~~~~~~ 276 (279)
T 2w5a_A 213 MPPFTAFSQKELAGKIREGKFRRIPYRYSDELNEIITRMLNLKDYHRPSVEEILENPLILEHHH 276 (279)
T ss_dssp SCSSCCSSHHHHHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTCCGGGS
T ss_pred CCCCcccCHHHHHHHHhhcccccCCcccCHHHHHHHHHHcCCCcccCCCHHHHHhChhhhhhcc
Confidence 344444455555554443211 111 12334567999999999999999999999999987654
No 471
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=90.15 E-value=0.029 Score=59.01 Aligned_cols=28 Identities=18% Similarity=0.466 Sum_probs=21.5
Q ss_pred ccccCCCCCCCCCCCCCccCCCCCcccC
Q 003158 798 EFINSEHTSKEETPPSSSSMLKHPYVSS 825 (843)
Q Consensus 798 dll~~~L~~dp~~R~sa~e~L~Hp~f~~ 825 (843)
+++.+||..||++|||++|+++||||..
T Consensus 262 ~li~~~l~~dp~~Rps~~~ll~h~~~~~ 289 (318)
T 2dyl_A 262 SFVKDCLTKDHRKRPKYNKLLEHSFIKR 289 (318)
T ss_dssp HHHHHHTCSCTTTSCCHHHHTTSHHHHH
T ss_pred HHHHHHccCChhHCcCHHHHhhCHHHHh
Confidence 4556667777888888888899999864
No 472
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=89.45 E-value=0.072 Score=55.54 Aligned_cols=33 Identities=18% Similarity=0.420 Sum_probs=29.4
Q ss_pred CCccccCCCCCCCCCCCCCccCCCCCcccCCCC
Q 003158 796 TPEFINSEHTSKEETPPSSSSMLKHPYVSSDVS 828 (843)
Q Consensus 796 ~~dll~~~L~~dp~~R~sa~e~L~Hp~f~~~~~ 828 (843)
..+++.+||..||++|||++|+++||||.....
T Consensus 247 l~~li~~~l~~dp~~Rps~~~ll~~~~~~~~~~ 279 (303)
T 3a7i_A 247 LKEFVEACLNKEPSFRPTAKELLKHKFILRNAK 279 (303)
T ss_dssp HHHHHHHHCCSSGGGSCCHHHHTTCHHHHHHCC
T ss_pred HHHHHHHHcCCChhhCcCHHHHhhChhhhcCCC
Confidence 467999999999999999999999999976544
No 473
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=89.34 E-value=1.8 Score=47.11 Aligned_cols=29 Identities=34% Similarity=0.458 Sum_probs=24.9
Q ss_pred EEeccCCCCcEEE------cCCCcEEEeecccccc
Q 003158 633 VFHRDIKASNILL------DHKFTAKVADFGLSRL 661 (843)
Q Consensus 633 iiH~Dlkp~NILl------~~~~~~kl~DfGla~~ 661 (843)
++|+|+.+.||++ +++..+.++||..|..
T Consensus 246 fcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~ 280 (401)
T 3g15_A 246 FCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred eEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence 6799999999999 4567899999998853
No 474
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=89.18 E-value=0.021 Score=60.55 Aligned_cols=28 Identities=32% Similarity=0.576 Sum_probs=23.0
Q ss_pred ccccCCCCCCCCCCCCCccCCCCCcccC
Q 003158 798 EFINSEHTSKEETPPSSSSMLKHPYVSS 825 (843)
Q Consensus 798 dll~~~L~~dp~~R~sa~e~L~Hp~f~~ 825 (843)
+++.+||..||++|||++|+++||||..
T Consensus 264 ~li~~~l~~dp~~Rps~~ell~hp~~~~ 291 (327)
T 3aln_A 264 NFVNLCLTKDESKRPKYKELLKHPFILM 291 (327)
T ss_dssp HHHHHHTCSSGGGSCCHHHHTTSHHHHH
T ss_pred HHHHHHhhCChhhCcCHHHHHhChHHHH
Confidence 5666778888888889999999999964
No 475
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=88.43 E-value=0.043 Score=58.85 Aligned_cols=31 Identities=26% Similarity=0.449 Sum_probs=22.9
Q ss_pred ccccCCCCCCCCCCCCCccCCCCCcccCCCC
Q 003158 798 EFINSEHTSKEETPPSSSSMLKHPYVSSDVS 828 (843)
Q Consensus 798 dll~~~L~~dp~~R~sa~e~L~Hp~f~~~~~ 828 (843)
+|+.+||..||++|||++|+++||||.....
T Consensus 284 ~li~~~l~~dP~~Rps~~~ll~h~~~~~~~~ 314 (348)
T 1u5q_A 284 NFVDSCLQKIPQDRPTSEVLLKHRFVLRERP 314 (348)
T ss_dssp HHHHHHTCSSGGGSCCHHHHTTCHHHHSCCC
T ss_pred HHHHHHcccChhhCcCHHHHhhChhhhccCC
Confidence 4555666777788888888899999876543
No 476
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=87.24 E-value=0.57 Score=32.66 Aligned_cols=8 Identities=13% Similarity=0.592 Sum_probs=5.2
Q ss_pred ceeehhHH
Q 003158 448 ALAGIILG 455 (843)
Q Consensus 448 ~~~~ii~g 455 (843)
.++++++|
T Consensus 13 ~Ia~~vVG 20 (44)
T 2jwa_A 13 SIISAVVG 20 (44)
T ss_dssp HHHHHHHH
T ss_pred chHHHHHH
Confidence 46666666
No 477
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=77.51 E-value=3 Score=44.33 Aligned_cols=34 Identities=6% Similarity=0.126 Sum_probs=30.4
Q ss_pred CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 003158 748 SYPSECVEKFIKLALKCCQDETDARPSMSEVMRE 781 (843)
Q Consensus 748 ~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~ 781 (843)
.++..++..+.+++.+||+.+|.+||++.++++.
T Consensus 301 ~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 334 (373)
T 1q8y_A 301 KFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNH 334 (373)
T ss_dssp CCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHTC
T ss_pred cCCcchHHHHHHHHHHHhccCccccCCHHHHhhC
Confidence 4577889999999999999999999999999753
No 478
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=77.49 E-value=0.18 Score=52.95 Aligned_cols=26 Identities=4% Similarity=-0.031 Sum_probs=23.9
Q ss_pred CccccCCCCCCCCCCCCCccCCCCCc
Q 003158 797 PEFINSEHTSKEETPPSSSSMLKHPY 822 (843)
Q Consensus 797 ~dll~~~L~~dp~~R~sa~e~L~Hp~ 822 (843)
.+++++||+.||++|+|++|+|+||-
T Consensus 280 ~~ll~~~L~~dP~~R~s~~ell~h~~ 305 (319)
T 4euu_A 280 TPVLANILEADQEKCWGFDQFFAETS 305 (319)
T ss_dssp HHHHHHHSCCCTTTSCCHHHHHHHHH
T ss_pred HHHHHHhccCChhhhccHHHhhhccH
Confidence 46899999999999999999999984
No 479
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=77.19 E-value=5.7 Score=38.58 Aligned_cols=115 Identities=10% Similarity=0.118 Sum_probs=77.2
Q ss_pred cCCcccceeeeeecCCcEEEEEecCCCC-CHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHHhcCCCCCEEeccCCCCcE
Q 003158 565 HHRNLVSLVGYCDEEGEQMLVYEFMSNG-TLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNI 643 (843)
Q Consensus 565 ~h~nIv~l~~~~~~~~~~~lV~e~~~~g-sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dlkp~NI 643 (843)
.||+.+.. .+-.+++.+.+.|+.-+.+ +... ++ .++...+++++.+|+....++++ -+|--+.|+|+
T Consensus 43 ~~~~Fl~~-~I~e~eD~v~~~y~~~~~~~~f~~-ik-----~~~~~eKlr~l~ni~~l~~~~~~-----r~tf~L~P~NL 110 (215)
T 4ann_A 43 HSPYFIDA-ELTELRDSFQIHYDINDNHTPFDN-IK-----SFTKNEKLRYLLNIKNLEEVNRT-----RYTFVLAPDEL 110 (215)
T ss_dssp CCTTBCCE-EEEECSSEEEEEECCCTTSEEGGG-GG-----GSCHHHHHHHHHHGGGGGGGGGS-----SEECCCSGGGE
T ss_pred cCCcccce-EEEEcccEEEEEEEcCcccCCHHH-HH-----hcCHHHHHHHHHHHHHHHHHhcC-----ceEEEEecceE
Confidence 57887766 4555566666666654321 2222 32 36678889999999887766654 37889999999
Q ss_pred EEcCCCcEEEeeccccccCCCCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCC
Q 003158 644 LLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPIS 720 (843)
Q Consensus 644 Ll~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~ 720 (843)
+++.++.+++.-.|+-..+ +|. ..+...=.-.+=|++..+++++..|.
T Consensus 111 ~f~~~~~p~i~~RGik~~l------------------------~P~-----~~~ee~fL~qyKAliiall~~K~~Fe 158 (215)
T 4ann_A 111 FFTRDGLPIAKTRGLQNVV------------------------DPL-----PVSEAEFLTRYKALVICAFNEKQSFD 158 (215)
T ss_dssp EECTTSCEEESCCEETTTB------------------------SCC-----CCCHHHHHHHHHHHHHHHHCTTCCHH
T ss_pred EEcCCCCEEEEEccCccCC------------------------CCC-----CCCHHHHHHHHHHHHHHHHcCCCCHH
Confidence 9999999999877764322 121 11222234457889999999988874
No 480
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=76.94 E-value=0.32 Score=50.98 Aligned_cols=35 Identities=17% Similarity=0.209 Sum_probs=23.7
Q ss_pred CCCCccccCCCCCCCCCCCC-------CccCCCCCcccCCCC
Q 003158 794 TKTPEFINSEHTSKEETPPS-------SSSMLKHPYVSSDVS 828 (843)
Q Consensus 794 ~~~~dll~~~L~~dp~~R~s-------a~e~L~Hp~f~~~~~ 828 (843)
....+++.+||..||++||| .+++++|||+.+...
T Consensus 266 ~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~~~~~~~~ 307 (323)
T 3qup_A 266 EEVYDLMYQCWSADPKQRPSFTCLRMELENILGHLSVLSTSQ 307 (323)
T ss_dssp HHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC--------
T ss_pred HHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHhhhcCCCC
Confidence 34557999999999999999 788899999987554
No 481
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=75.93 E-value=0.8 Score=46.95 Aligned_cols=29 Identities=17% Similarity=0.080 Sum_probs=25.4
Q ss_pred HHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 003158 753 CVEKFIKLALKCCQDETDARPSMSEVMRE 781 (843)
Q Consensus 753 ~~~~l~~l~~~c~~~~p~~RPs~~~vl~~ 781 (843)
+++++.+++.+|++.||++||++.|+++.
T Consensus 235 ~s~~~~~li~~~L~~dP~~R~s~~eil~h 263 (275)
T 3hyh_A 235 LSPGAAGLIKRMLIVNPLNRISIHEIMQD 263 (275)
T ss_dssp SCHHHHHHHHHHSCSSGGGSCCHHHHHHC
T ss_pred CCHHHHHHHHHHccCChhHCcCHHHHHcC
Confidence 45677899999999999999999999864
No 482
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=75.83 E-value=0.37 Score=53.58 Aligned_cols=59 Identities=5% Similarity=0.050 Sum_probs=17.3
Q ss_pred CCCcccccCCeeEEEEEeCC-CcEEEE------EEeccCChh--hHHHHHHHHHHHHhccCCcccceeeee
Q 003158 515 SSTQIGQGGYGKVYKGILPD-GTVVAV------KRAQEGSLQ--GEKEFLTEIQFLSRLHHRNLVSLVGYC 576 (843)
Q Consensus 515 ~~~~lg~G~~g~Vy~~~~~~-~~~vav------K~~~~~~~~--~~~~~~~E~~~l~~l~h~nIv~l~~~~ 576 (843)
..+.|| ||.||+|.+.. ..+||| |..+..... ..+.+.+|..+++..+|||+++.+++.
T Consensus 146 l~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~ 213 (463)
T 3cxl_A 146 IYEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFK 213 (463)
T ss_dssp STTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEE
T ss_pred ccccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceE
Confidence 356676 99999999854 467888 766543322 234688899999999999999998865
No 483
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=74.18 E-value=3.5 Score=28.84 Aligned_cols=26 Identities=8% Similarity=0.158 Sum_probs=19.9
Q ss_pred cceeehhHHHHHHHHHHHHHHHHHHH
Q 003158 447 AALAGIILGAIAGAVTISAIVSLLIV 472 (843)
Q Consensus 447 ~~~~~ii~g~~~~~~~~~~~~~~~~~ 472 (843)
....+|+.|++.+++.+++++..+++
T Consensus 8 s~~~~IA~gVVgGv~~~~ii~~~~~~ 33 (44)
T 2ks1_B 8 PKIPSIATGMVGALLLLLVVALGIGL 33 (44)
T ss_dssp SCSSSSTHHHHHHHHHHHHHHHHHHH
T ss_pred CCcceEEeehhHHHHHHHHHHHHHHH
Confidence 68888888888888888877765443
No 484
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=73.21 E-value=0.73 Score=47.24 Aligned_cols=48 Identities=10% Similarity=0.158 Sum_probs=33.8
Q ss_pred CCHHHHHHHHHHhhhhCCCCCCCCCccccCCCCCCCCCCCCCccCCCC
Q 003158 773 PSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKH 820 (843)
Q Consensus 773 Ps~~~vl~~L~~~~~~~~~~~~~~~dll~~~L~~dp~~R~sa~e~L~H 820 (843)
.................+.......+++.+||..||++|||++|+++|
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 269 (289)
T 4fvq_A 222 LDSQRKLQFYEDRHQLPAPKAAELANLINNCMDYEPDHRPSFRAIIRD 269 (289)
T ss_dssp SCHHHHHHHHHTTCCCCCCSSCTTHHHHHHHSCSSGGGSCCHHHHHHH
T ss_pred cchHHHHHHhhccCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence 344444444444333334456677899999999999999999999875
No 485
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=72.44 E-value=0.78 Score=47.44 Aligned_cols=27 Identities=15% Similarity=0.416 Sum_probs=23.9
Q ss_pred HHHHHHHHHHhcccCCCCCCCHHHHHH
Q 003158 754 VEKFIKLALKCCQDETDARPSMSEVMR 780 (843)
Q Consensus 754 ~~~l~~l~~~c~~~~p~~RPs~~~vl~ 780 (843)
++++.+++.+||.+||.+||++.++++
T Consensus 256 ~~~~~~li~~~L~~dP~~R~s~~e~l~ 282 (290)
T 3fpq_A 256 IPEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp CHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred CHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 356788999999999999999999875
No 486
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=71.83 E-value=15 Score=35.70 Aligned_cols=115 Identities=12% Similarity=0.065 Sum_probs=76.0
Q ss_pred cCCcccceeeeeecCCcEEEEEecCCCCCHHHHHhhcCCCCcchhHHHHHHHHHHHHHH-HHhcCCCCCEEeccCCCCcE
Q 003158 565 HHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGIL-YLHTEADPPVFHRDIKASNI 643 (843)
Q Consensus 565 ~h~nIv~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~-yLH~~~~~~iiH~Dlkp~NI 643 (843)
.||++ -...-.+++.+.+.++.-+++.=...++ .++...+++++.+|+.... +++. -+|--+.|+|+
T Consensus 48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~~i~-----~~~~~eKlrll~nl~~L~~~~~~~-----r~tf~l~P~NL 115 (219)
T 4ano_A 48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFAAIR-----KTTLLSRIRAAIHLVSKVKHHSAR-----RLIFIVCPENL 115 (219)
T ss_dssp SCSSS--EEEEEECSSEEEEEEECCTTCEEHHHHH-----TSCHHHHHHHHHHHHHHHSSCCSS-----SEECCCCGGGE
T ss_pred cCCCC--CeEEEEeCCEEEEEEEcCcccCcHHHHH-----hcCHHHHHHHHHHHHHHHHHhhhC-----ceeEEEeCceE
Confidence 57777 3334466677777777654333233342 2667888889988887666 5544 47889999999
Q ss_pred EEcCCCcEEEeeccccccCCCCCCCCcccceeeeeecccCCccCchhcccCCCCchhhhHHHHHHHHHHHhCCCCCC
Q 003158 644 LLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPIS 720 (843)
Q Consensus 644 Ll~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~G~~l~elltg~~pf~ 720 (843)
++|.++.+++.-.|+-.. ++|.- .+..-=.-++=|++..++.++..|.
T Consensus 116 ~f~~~~~p~i~hRGi~~~------------------------lpP~e-----~~ee~fl~qyKali~all~~K~~Fe 163 (219)
T 4ano_A 116 MFNRALEPFFLHVGVKES------------------------LPPDE-----WDDERLLREVKATVLALTEGEYRFD 163 (219)
T ss_dssp EECTTCCEEESCCEETTT------------------------BSSCS-----CCHHHHHHHHHHHHHHHTTCSSCHH
T ss_pred EEeCCCcEEEEEcCCccc------------------------CCCCC-----CCHHHHHHHHHHHHHHHHcCCCCHH
Confidence 999999999987776432 22221 1222223457888899998877763
No 487
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=71.59 E-value=0.86 Score=46.33 Aligned_cols=29 Identities=17% Similarity=0.080 Sum_probs=25.2
Q ss_pred HHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 003158 753 CVEKFIKLALKCCQDETDARPSMSEVMRE 781 (843)
Q Consensus 753 ~~~~l~~l~~~c~~~~p~~RPs~~~vl~~ 781 (843)
+++.+.+++.+|++.+|.+||++.++++.
T Consensus 235 ~~~~~~~li~~~l~~dP~~Rps~~e~l~h 263 (275)
T 2eue_A 235 LSPGAAGLIKRMLIVNPLNRISIHEIMQD 263 (275)
T ss_dssp SCHHHHHHHHHHSCSSGGGSCCHHHHTTC
T ss_pred CCHHHHHHHHHHhhcCHhHCCCHHHHhhC
Confidence 45668899999999999999999999753
No 488
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=70.57 E-value=4.6 Score=28.19 Aligned_cols=25 Identities=20% Similarity=0.177 Sum_probs=17.0
Q ss_pred cceeehhHHHHHHHHHHHHHHHHHH
Q 003158 447 AALAGIILGAIAGAVTISAIVSLLI 471 (843)
Q Consensus 447 ~~~~~ii~g~~~~~~~~~~~~~~~~ 471 (843)
....+|+.|++.+++.+++++..++
T Consensus 7 s~~~aIA~gVVgGv~~v~ii~~~~~ 31 (44)
T 2l2t_A 7 ARTPLIAAGVIGGLFILVIVGLTFA 31 (44)
T ss_dssp CSSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcceEEEeehHHHHHHHHHHHHHH
Confidence 3567777777777777777775543
No 489
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=70.26 E-value=2.1 Score=44.63 Aligned_cols=33 Identities=15% Similarity=0.209 Sum_probs=28.8
Q ss_pred CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 003158 749 YPSECVEKFIKLALKCCQDETDARPSMSEVMRE 781 (843)
Q Consensus 749 ~~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~ 781 (843)
.+..+++.+.+++.+||+.+|.+||++.++++.
T Consensus 297 ~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~h 329 (339)
T 1z57_A 297 SQDVEHERLFDLIQKMLEYDPAKRITLREALKH 329 (339)
T ss_dssp CCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred cchhhHHHHHHHHHHHhCcCcccccCHHHHhcC
Confidence 356778899999999999999999999998753
No 490
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=70.07 E-value=2.1 Score=46.03 Aligned_cols=28 Identities=21% Similarity=0.437 Sum_probs=25.8
Q ss_pred ccccCCCCCCCCCCCCCccCCCCCcccC
Q 003158 798 EFINSEHTSKEETPPSSSSMLKHPYVSS 825 (843)
Q Consensus 798 dll~~~L~~dp~~R~sa~e~L~Hp~f~~ 825 (843)
+||.+||+.||++|||++|+|+||||++
T Consensus 370 ~li~~~L~~dP~~Rpt~~e~l~hp~~~~ 397 (397)
T 1wak_A 370 DFLLPMLELIPEKRATAAECLRHPWLNS 397 (397)
T ss_dssp HHHGGGGCSSGGGSCCHHHHHTSGGGGC
T ss_pred HHHHHHhccChhhcCCHHHHhhCccccC
Confidence 6888899999999999999999999974
No 491
>2k9y_A Ephrin type-A receptor 2; receptor tyrosine kinase, membrane protein, dimeric transmembrane domain, ephrin receptor, ATP-binding, glycoprotein; NMR {Homo sapiens}
Probab=69.54 E-value=2.5 Score=29.07 Aligned_cols=16 Identities=25% Similarity=0.304 Sum_probs=9.3
Q ss_pred eeehhHHHHHHHHHHH
Q 003158 449 LAGIILGAIAGAVTIS 464 (843)
Q Consensus 449 ~~~ii~g~~~~~~~~~ 464 (843)
+++|++|++++++.++
T Consensus 12 ~~~I~~~vv~Gv~ll~ 27 (41)
T 2k9y_A 12 NLAVIGGVAVGVVLLL 27 (41)
T ss_dssp STHHHHHHHHHHHHHH
T ss_pred eEEEEeehhHHHHHHH
Confidence 3456666666666554
No 492
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=68.86 E-value=0.51 Score=49.94 Aligned_cols=35 Identities=17% Similarity=0.218 Sum_probs=29.4
Q ss_pred CCCCCCCccccCCCCCCCCCCCCCccC-------------CCCCcccC
Q 003158 791 ESDTKTPEFINSEHTSKEETPPSSSSM-------------LKHPYVSS 825 (843)
Q Consensus 791 ~~~~~~~dll~~~L~~dp~~R~sa~e~-------------L~Hp~f~~ 825 (843)
..++.+.+||.+||+.||++||||+|+ |+|||+..
T Consensus 281 ~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~~~~~l~hPw~~~ 328 (336)
T 4g3f_A 281 SCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKALQEVGGLKSPWKGE 328 (336)
T ss_dssp TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTTSSCSCSSSS
T ss_pred cCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHhhhhhccCCCcCC
Confidence 344556789999999999999999984 89999965
No 493
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=65.19 E-value=3.9 Score=43.86 Aligned_cols=29 Identities=14% Similarity=0.155 Sum_probs=25.8
Q ss_pred ccccCCCCCCCCCCCCCccCCCCCcccCC
Q 003158 798 EFINSEHTSKEETPPSSSSMLKHPYVSSD 826 (843)
Q Consensus 798 dll~~~L~~dp~~R~sa~e~L~Hp~f~~~ 826 (843)
+||.+||++||++||||+|+|+||||+..
T Consensus 351 dli~~mL~~dP~~Rpta~e~L~hp~f~~~ 379 (382)
T 2vx3_A 351 DLILRMLDYDPKTRIQPYYALQHSFFKKT 379 (382)
T ss_dssp HHHHHHTCSCTTTSCCHHHHTTSGGGCC-
T ss_pred HHHHHhcCCChhhCCCHHHHhcCcccccC
Confidence 67888899999999999999999999864
No 494
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=65.09 E-value=3.1 Score=43.70 Aligned_cols=31 Identities=13% Similarity=0.104 Sum_probs=27.3
Q ss_pred CHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 003158 750 PSECVEKFIKLALKCCQDETDARPSMSEVMR 780 (843)
Q Consensus 750 ~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~ 780 (843)
....+..+.+++.+||+.+|.+||++.++++
T Consensus 303 ~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~ 333 (355)
T 2eu9_A 303 DSLEHVQLFDLMRRMLEFDPAQRITLAEALL 333 (355)
T ss_dssp CSHHHHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred cchhHHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 4456778999999999999999999999875
No 495
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=64.19 E-value=3 Score=43.06 Aligned_cols=29 Identities=10% Similarity=0.175 Sum_probs=25.5
Q ss_pred HHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 003158 753 CVEKFIKLALKCCQDETDARPSMSEVMRE 781 (843)
Q Consensus 753 ~~~~l~~l~~~c~~~~p~~RPs~~~vl~~ 781 (843)
++..+.+++..||+.+|.+||++.++++.
T Consensus 257 ~~~~~~~li~~~L~~dP~~Rpt~~ell~h 285 (311)
T 4agu_A 257 ISYPALGLLKGCLHMDPTERLTCEQLLHH 285 (311)
T ss_dssp CCHHHHHHHHHHCCSSTTTSCCHHHHHTS
T ss_pred ccHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence 45678899999999999999999999864
No 496
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=63.90 E-value=2.2 Score=45.93 Aligned_cols=32 Identities=28% Similarity=0.468 Sum_probs=26.3
Q ss_pred CHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 003158 750 PSECVEKFIKLALKCCQDETDARPSMSEVMRE 781 (843)
Q Consensus 750 ~~~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~ 781 (843)
+..+++.+.+++.+||+.+|.+||++.++++.
T Consensus 303 ~~~~s~~~~~li~~~L~~dP~~Rpta~ell~h 334 (389)
T 3gni_B 303 HRTFSPHFHHFVEQCLQRNPDARPSASTLLNH 334 (389)
T ss_dssp ---CCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred ccccCHHHHHHHHHHhhcCcccCCCHHHHhcC
Confidence 45566789999999999999999999999854
No 497
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=63.59 E-value=0.68 Score=48.23 Aligned_cols=33 Identities=6% Similarity=0.075 Sum_probs=29.0
Q ss_pred CCCCCccccCCCCCCCCCCCCCccCCCCCcccC
Q 003158 793 DTKTPEFINSEHTSKEETPPSSSSMLKHPYVSS 825 (843)
Q Consensus 793 ~~~~~dll~~~L~~dp~~R~sa~e~L~Hp~f~~ 825 (843)
...+.+++.+||..||++|+++.+++.|+|+..
T Consensus 247 ~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~ 279 (311)
T 3ork_A 247 SADLDAVVLKALAKNPENRYQTAAEMRADLVRV 279 (311)
T ss_dssp CHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHH
Confidence 344567999999999999999999999999964
No 498
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=63.56 E-value=3.8 Score=41.73 Aligned_cols=27 Identities=19% Similarity=0.383 Sum_probs=23.9
Q ss_pred HHHHHHHHHHhcccCCCCCCCHHHHHH
Q 003158 754 VEKFIKLALKCCQDETDARPSMSEVMR 780 (843)
Q Consensus 754 ~~~l~~l~~~c~~~~p~~RPs~~~vl~ 780 (843)
++.+.+++.+|++.+|.+||++.++++
T Consensus 252 ~~~~~~li~~~L~~dP~~Rps~~e~l~ 278 (285)
T 3is5_A 252 TPQAVDLLKQMLTKDPERRPSAAQVLH 278 (285)
T ss_dssp CHHHHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred CHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 356778999999999999999999975
No 499
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=62.98 E-value=1.7 Score=45.39 Aligned_cols=21 Identities=24% Similarity=0.408 Sum_probs=18.8
Q ss_pred HHHHhcccCCCCCCCHHHHHH
Q 003158 760 LALKCCQDETDARPSMSEVMR 780 (843)
Q Consensus 760 l~~~c~~~~p~~RPs~~~vl~ 780 (843)
++.+||+.+|.+||++.++++
T Consensus 273 li~~~l~~dp~~Rps~~~ll~ 293 (320)
T 3a99_A 273 LIRWCLALRPSDRPTFEEIQN 293 (320)
T ss_dssp HHHHHTCSSGGGSCCHHHHHT
T ss_pred HHHHHccCChhhCcCHHHHhc
Confidence 567899999999999999975
No 500
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=62.69 E-value=2.7 Score=44.51 Aligned_cols=30 Identities=7% Similarity=0.155 Sum_probs=25.8
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 003158 752 ECVEKFIKLALKCCQDETDARPSMSEVMRE 781 (843)
Q Consensus 752 ~~~~~l~~l~~~c~~~~p~~RPs~~~vl~~ 781 (843)
.+++++.+++.+||..||.+||++.|+++.
T Consensus 295 ~~s~~~~dli~~~L~~dP~~R~ta~e~l~H 324 (346)
T 4fih_A 295 KVSPSLKGFLDRLLVRDPAQRATAAELLKH 324 (346)
T ss_dssp GSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred cCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 345678899999999999999999998753
Done!