BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 003163
(843 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P73625|MUTS2_SYNY3 MutS2 protein OS=Synechocystis sp. (strain PCC 6803 / Kazusa)
GN=mutSB PE=3 SV=1
Length = 822
Score = 310 bits (794), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 246/824 (29%), Positives = 393/824 (47%), Gaps = 145/824 (17%)
Query: 42 SDDKKSRVVYESLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETN 101
SD + E+L +LEW +LC +S+F +T LG A + +++S LL +T
Sbjct: 2 SDSTNLTIAEETLALLEWPRLCQHLSTFTQTPLG--AIAARYLLPPSQWEESRELLAQTQ 59
Query: 102 AAIEMQKHGSCSLDLTGVDLSLVKSAIREVRRASPLRPNEALAVVALLQFSETLQLSLRA 161
A ++ + G+ + + + V R + E LA+ L LR
Sbjct: 60 AVESIENSPESNWHFKGI--ADITEPLARVERGGLVTGLELLAIAGTLAGVR----RLRR 113
Query: 162 AIKEDADLYIRFMPLTQMIMQLFVNRSLIKSIMQVVDEDGSIKDSASPALKQSRGQVQML 221
I+E DL I L ++ ++ L ++I + EDG + + ASP L + R +++ +
Sbjct: 114 VIEERDDLEI----LQTLVAEVRTLPELEQAIHHCLGEDGKVAERASPKLGEIRQKLKAV 169
Query: 222 ERKLYQLMDMLIRNENNESLFLEVSSIHGR-----LCIRTGADQLSFKGLLLSSSGIGSV 276
++ Q + +I+ ++N L+ + I R L I+ G + G++ SS G+
Sbjct: 170 REQIQQKLQKIIQRQSN---ALQEAVITQRGDRFVLPIKAGYKE-QMPGIVHDSSASGNT 225
Query: 277 --IEPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNAR 334
+EP + V L ++L+QAR EE +L L++++ L ++E +L +LD+ AR
Sbjct: 226 LYVEPQAIVELGNKLRQARRQEQTEEERILRQLSDQVLEVLLDLEHLLAIATRLDLATAR 285
Query: 335 ATYSLSFGGTSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKT 394
YS G P P D K P+T L + HPLL Q +++
Sbjct: 286 VRYSFWLGAHPPQWLTPGDEK------PIT-------------LRQLRHPLLHWQAEKE- 325
Query: 395 QQAWKDLESANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKT 454
GG A VPI + I +
Sbjct: 326 --------------------GGPAV------------------------VPITLTIDSQI 341
Query: 455 RVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQS 514
RV+ ITGPNTGGKT+ LKT+GL +MAK GL+I + E ++PWF + ADIGDEQSL Q+
Sbjct: 342 RVIAITGPNTGGKTVTLKTLGLVALMAKVGLYIPAKETVEMPWFAQILADIGDEQSLQQN 401
Query: 515 LSTFSGHLKQIGNIISQSTS------------------QSLVLLDEIGAGTNPLEGTALG 556
LSTFSGH+ +I I+ S SLVLLDE+GAGT+P EG+AL
Sbjct: 402 LSTFSGHICRIIRILQALPSGVQDVLDPEIDSPNHPIFPSLVLLDEVGAGTDPTEGSALA 461
Query: 557 MSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRS 616
++LL A+ LT+ATTH+GELK LKY + FENA +EFD+ L PTY++LWG+PGRS
Sbjct: 462 IALLRHLADQ-PCLTVATTHYGELKALKYQDARFENASVEFDDQSLSPTYRLLWGIPGRS 520
Query: 617 SAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRN 676
+A+ IA+RLGLP +V+ A+ G S +IN+VI +E + + + A+ L +
Sbjct: 521 NALAIAQRLGLPLAIVEQAKDKLGGFSEDINQVIAGLESQRREQEQKAANAQKLLQETEI 580
Query: 677 LHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRA 736
++ ++ + AS + R+ + +S + QQ +A + + V ++
Sbjct: 581 FYQ-------QVSQKAASLQARERE--------LKSYQDQEVQQAIAAAKEEIAKVIRQL 625
Query: 737 QQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTEL 796
Q+ +PSA ++ T++ Q KV +P+ +
Sbjct: 626 QRGKPSAQKAQQATEI-------LGQIQAEQKAKV----------------APKPIGYQ- 661
Query: 797 PNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 840
P VG+ + + SFG+ V +V + + + V +G MK + DI
Sbjct: 662 PTVGERIRIPSFGQTAEVTQVNATAQTVNVTLGLMKMTVPMADI 705
>sp|C0Z9F1|MUTS2_BREBN MutS2 protein OS=Brevibacillus brevis (strain 47 / JCM 6285 / NBRC
100599) GN=mutS2 PE=3 SV=1
Length = 785
Score = 269 bits (687), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 243/804 (30%), Positives = 387/804 (48%), Gaps = 145/804 (18%)
Query: 54 LRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIEMQKHGSCS 113
L+ LE+DK+ + A + G+E ++L LRL DE A + + +
Sbjct: 6 LKTLEYDKIVALLIDKASCTYGKEKA-SELIPF-------LRL-DEVINAQQGTEQAATV 56
Query: 114 LDLTGVDLSLVKSAIREVRRASPL---RPNEALAVVALLQFSETLQLSLRAA-----IKE 165
L L G S+ IR++R P+ R N LA + LL + T+ R + +
Sbjct: 57 LRLKG---SVPLGGIRDIR--GPVQRARLNAMLAPMELLDIASTVMAGRRLKTFLLDMCD 111
Query: 166 DADLYIRFMPLTQMIMQLFVN-RSLIKSIMQVVDEDGSIKDSASPALKQSRGQVQMLERK 224
D +L PL Q + R L I + VDE+G I DSAS L+Q R +++ LE +
Sbjct: 112 DHEL-----PLLQQQAERIEGLRELETEIRRCVDENGDILDSASLELRQVRQEIRQLESR 166
Query: 225 LYQLMDMLIRNENNESLFLE-VSSIHG-RLCIRTGADQLSFKGLLL---SSSGIGSVIEP 279
+ + +D + R+ + + +E + +I G R I + S G ++ S+SG IEP
Sbjct: 167 IREKLDQMTRSSTYQKMLMENIVTIRGDRFVIPVKQEYRSVFGGIVHDQSASGATLFIEP 226
Query: 280 LSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSL 339
V +N++L++ R + E +L LTE++ ++ + + + +LD + A+A +
Sbjct: 227 EVIVEMNNKLRELRLREEREVERILYVLTEQVSFAVEALVENTEALTELDFMFAKAQLAW 286
Query: 340 SFGGTSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKTQQAWK 399
S P I ++R + + + KA HPL+
Sbjct: 287 SMKAICPRI---------------------NDRGY-VNMRKARHPLI------------- 311
Query: 400 DLESANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVI 459
P E+ V P+D+ + + + +V+
Sbjct: 312 ------------------------------PREVVV---------PVDVELGGEYQAIVV 332
Query: 460 TGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFS 519
TGPNTGGKT+ LKT+GL +M +GLHI + E +++ F S+FADIGDEQS+ QSLSTFS
Sbjct: 333 TGPNTGGKTVSLKTIGLLSLMTMAGLHIPAEEESEMTVFSSIFADIGDEQSIEQSLSTFS 392
Query: 520 GHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGE 579
H+ I I+++ +SLVL DE+GAGT+P EG AL MS+++ +SG+ L +ATTH+ E
Sbjct: 393 SHMTNIIQILAKMDDKSLVLFDELGAGTDPTEGAALAMSIIDHVIDSGARL-VATTHYSE 451
Query: 580 LKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLY 639
LK Y NA +EFD L+PTY++L GVPGRS+A IA RLGLP ++ AR
Sbjct: 452 LKAYAYDRPEVINASVEFDVQTLRPTYRLLIGVPGRSNAFAIARRLGLPEHIIDVAR--- 508
Query: 640 GAASAEINEV---IIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQR 696
G+ S E N+V I +ER + A+ + L L R + A ++
Sbjct: 509 GSISEEDNQVESMIASLERNRKSAEADRLAAKAARQEAEELRTQLEEERAQF----AEEK 564
Query: 697 FRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQ 756
+++++ D A IA L + A+ + R L A+ + + + K
Sbjct: 565 NKRMERAEDEARIAVQLAKEEAETII------RELREMMAEGMEIKEHRLIDAKK----- 613
Query: 757 HVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIK 816
L + + +KV+ PA A V+ T++ VGD V V+SFG+KGTV++
Sbjct: 614 -RLGNAVLELEKEKVKKPAKA-------------VRATQI-KVGDEVMVTSFGQKGTVLE 658
Query: 817 VEPSKEEIVVQVGNMKWIMKFTDI 840
+ + EE +VQ+G MK +K D+
Sbjct: 659 -KVNNEEFLVQIGIMKMKVKRDDM 681
>sp|Q49WR1|MUTS2_STAS1 MutS2 protein OS=Staphylococcus saprophyticus subsp. saprophyticus
(strain ATCC 15305 / DSM 20229) GN=mutS2 PE=3 SV=1
Length = 782
Score = 262 bits (669), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 233/797 (29%), Positives = 383/797 (48%), Gaps = 127/797 (15%)
Query: 52 ESLRVLEWDKLCHSVSSFARTSLGREATLTQLWSIN-QTYQDSLRLLDETNAAIEMQKHG 110
+SL VLE+DK+ + + + LG+E + + + T + + DE + KH
Sbjct: 4 KSLNVLEFDKIKALIENETISDLGKEKVVDMAPATDFNTVEFQMNETDEISQI--YNKHR 61
Query: 111 SCSLDLTGVDLSLVKSAIREVRRASPLRPNEALAVVALLQFSETLQLSLRAAIKEDADLY 170
SL +G L+ + + I + L +E + L+Q + + E+
Sbjct: 62 MPSL--SG--LAKISTYIHRAKIGGVLSVSELNVIKRLIQIQNQYKTFYNNLLNEEET-- 115
Query: 171 IRFMPLTQMIMQLFVNRSLIKSIMQVVDEDGSIKDSASPALKQSRGQVQMLERKLYQLMD 230
I + L + QL V L +SI Q D + D+AS L+ R ++ +++ Q +D
Sbjct: 116 INYPILNDRMEQLPVLSDLYQSIHQKCDT-YDLYDNASYELQGIRSKISSTNQRIKQNLD 174
Query: 231 MLIRNENNESLFLE--VSSIHGRLCIRTGAD-QLSFKGLL--LSSSGIGSVIEPLSAVPL 285
+++++ N+ + V+ + R I A+ + F G++ S+SG IEP S V +
Sbjct: 175 KIVKSQANQKKLSDAIVTVRNERNVIPVKAEYRQDFNGIVHDQSASGQTLYIEPSSIVEM 234
Query: 286 NDELQQARASVTKAEEDVLLALTEKMQVDLDE--IEKMLNGIIQLDVVNARATYSLSFGG 343
++++ + + E +L ALT ++ + D I + + G Q+D + A+A Y+ S G
Sbjct: 235 SNQISRLKNDEAIERERILSALTVEVAEEADACLISESIMG--QIDFLTAKARYASSIKG 292
Query: 344 TSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKTQQAWKDLES 403
T P ++ T+YLPKA+HPLL KQ
Sbjct: 293 TKPQFT----------------------KDRTVYLPKAFHPLL---DKQTV--------V 319
Query: 404 ANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGPN 463
ANT I A+ ++ITGPN
Sbjct: 320 ANT-----------------------------------------IEFAQDIETVIITGPN 338
Query: 464 TGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLK 523
TGGKT+ LKT+GL ++MA+SG+ I + + +++ F++V+ DIGDEQS+ QSLSTFS H+K
Sbjct: 339 TGGKTVTLKTLGLIIVMAQSGILIPTLDGSQLSIFENVYCDIGDEQSIEQSLSTFSSHMK 398
Query: 524 QIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTL 583
I I+ +T SL+L DE+GAGT+P EG AL MS+L+ E GSL+ +ATTH+ ELK
Sbjct: 399 NIVEILQDTTKNSLILFDELGAGTDPSEGAALAMSILDHVHEIGSLV-MATTHYPELKAY 457
Query: 584 KYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAAS 643
Y+ + NA +EFD L PTYK+L GVPGRS+A +I+++LGL V+Q A+ + G
Sbjct: 458 SYNREGVMNASVEFDVNTLSPTYKLLMGVPGRSNAFDISKKLGLNMKVIQKAKSMIGQDE 517
Query: 644 AEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKI 703
EINE+I +E + E E + L +++ H L + + H + Q +
Sbjct: 518 QEINEMIASLESNSKRVDEQRIELDYLLREAQDTHDALAKQYEQYQNH-------EKQLM 570
Query: 704 SDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNF 763
++A + A Q SA++ + K ++LR + +H L
Sbjct: 571 NEAK--------EKANQRVKSATKEADDILKELRELRDQKGADV-------KEHELIDKK 615
Query: 764 QQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEE 823
+Q D+ E K +KQ+ + K+ + N GD V V ++G+KG V+++ E
Sbjct: 616 KQLD-DQYE---------AKSLKQNVQKKKWDEINAGDEVKVLTYGQKGEVLEL-IDNNE 664
Query: 824 IVVQVGNMKWIMKFTDI 840
VVQ+G +K + D+
Sbjct: 665 AVVQMGIIKMKLPLEDL 681
>sp|Q4L5E9|MUTS2_STAHJ MutS2 protein OS=Staphylococcus haemolyticus (strain JCSC1435)
GN=mutS2 PE=3 SV=1
Length = 783
Score = 260 bits (665), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 235/795 (29%), Positives = 373/795 (46%), Gaps = 122/795 (15%)
Query: 52 ESLRVLEWDKLCHSVSSFARTSLGREATLTQLWSIN-QTYQDSLRLLDETNAAIEMQKHG 110
++L VLE+DK+ V+S + LGRE + + +T + + DE + KH
Sbjct: 4 KTLDVLEFDKIKSFVASETISDLGREKVSKMSPATDFETVEFQMNETDEISQI--YNKHR 61
Query: 111 SCSLDLTGVDLSLVKSAIREVRRASPLRPNEALAVVALLQFSETLQLSLRAAIKEDADLY 170
SL +G L+ + I L E V L+Q + ++ED +
Sbjct: 62 LPSL--SG--LAKISPLIHRANIGGVLNVTELNLVKRLIQVQNQFKTFYNQLLEEDEQV- 116
Query: 171 IRFMPLTQMIMQLFVNRSLIKSIMQVVDEDGSIKDSASPALKQSRGQVQMLERKLYQLMD 230
+++ L + QL + L + I + D + DSAS L+ R ++ +++ Q +D
Sbjct: 117 VKYPILNDKMNQLPILSDLFQEINEKCDTH-DLYDSASYELQGIRSKISSTNQRIRQNLD 175
Query: 231 MLIRNENNESLFLE--VSSIHGRLCIRTGAD-QLSFKGLL--LSSSGIGSVIEPLSAVPL 285
+++++ N+ + ++ + R I A+ + FKG++ S+SG IEP S V +
Sbjct: 176 RIVKSQANQKKLSDAIITVRNDRNVIPVKAEYRQDFKGIVHDQSASGQTLYIEPSSIVEM 235
Query: 286 NDELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTS 345
N+++ + R E +L LT + + D + + Q+D + A+A Y+ S GT
Sbjct: 236 NNQISRLRNDEAVERERILTELTGMVAAEADGCLIAESVMGQIDFLTAKARYARSIKGTK 295
Query: 346 PNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKTQQAWKDLESAN 405
P + ++ T+YLP AYHPLL KD AN
Sbjct: 296 PTFY----------------------KDRTVYLPNAYHPLL-----------NKDTVVAN 322
Query: 406 TELRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGPNTG 465
T I ++ITGPNTG
Sbjct: 323 T-----------------------------------------IEFVDDIETVIITGPNTG 341
Query: 466 GKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQI 525
GKT+ LKT+GL ++MA+SGL I + + +++ F++V+ DIGDEQS+ QSLSTFS H+K I
Sbjct: 342 GKTVTLKTLGLIIIMAQSGLLIPTLDGSQLSVFENVYCDIGDEQSIEQSLSTFSSHMKNI 401
Query: 526 GNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKY 585
I+ ++ SLVL DE+GAGT+P EG AL MS+L+ E GSL+ +ATTH+ ELK Y
Sbjct: 402 VEILQETDKNSLVLFDELGAGTDPSEGAALAMSILDHVREIGSLV-MATTHYPELKAYSY 460
Query: 586 SNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAE 645
+ + NA +EFD L PTYK+L GVPGRS+A +I+ +LGL ++ A+ + G E
Sbjct: 461 NREGVMNASVEFDVNTLSPTYKLLMGVPGRSNAFDISRKLGLSLGIINKAKTMIGTDEQE 520
Query: 646 INEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISD 705
IN +I +E+ + E E L +R H + LEH Q +K+ D
Sbjct: 521 INSMIESLEKNSKRVDEQRIELDRLLKEARKTHDD--------LEHQYEQYKSYEKKLMD 572
Query: 706 AAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQ 765
A + A Q SA++ + K + LR + +H L +Q
Sbjct: 573 EAK-------EKANQRVKSATKEADSILKELRTLRDQKGADV-------KEHELIDKKKQ 618
Query: 766 TTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIV 825
D+ E K +KQ+ + ++ + + GD V V S+G+KG V S+EE V
Sbjct: 619 LD-DQYE---------AKSLKQNVQKQKYDEIHAGDEVKVLSYGQKGEV-LELVSEEEAV 667
Query: 826 VQVGNMKWIMKFTDI 840
VQ+G +K + D+
Sbjct: 668 VQMGIIKMKLPIEDL 682
>sp|A7Z7E7|MUTS2_BACA2 MutS2 protein OS=Bacillus amyloliquefaciens (strain FZB42) GN=mutS2
PE=3 SV=1
Length = 785
Score = 259 bits (661), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 203/636 (31%), Positives = 309/636 (48%), Gaps = 95/636 (14%)
Query: 54 LRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQ--TYQDSLRLLDETNAAIEMQKHGS 111
L LE+ K+ +++ A +SLGRE L QL + Q L ++E +A + ++ H
Sbjct: 6 LSSLEFHKVKEQITAHAASSLGRE-KLLQLKPLTDLSDIQKQLDEVEEASAVMRLRGHAP 64
Query: 112 CSLDLTGVDLSLVKSAIREVRRASPLRPNEALAVVALLQFSETLQLSLRAAIKEDADLYI 171
L+ ++SA+R S L P E + LL + ++ + + + ED
Sbjct: 65 FG------GLTDIRSALRRAEIGSVLTPAEFTELSGLLYAVKQMKHFI-SQMTEDG---- 113
Query: 172 RFMPLTQM-IMQLFVNRSLIKSIMQVVDEDGSIKDSASPALKQSRGQVQMLERKLYQLMD 230
+PL Q +L L + I +D+ G + D ASPAL+ R Q++ LE ++ ++
Sbjct: 114 VGIPLIQAHAEELITLGDLEREINSCIDDHGEVLDHASPALRGIRTQLRTLESRVRDRLE 173
Query: 231 MLIRNENNESLFLE--VSSIHGRLCIRTGADQLSFKGLLL---SSSGIGSVIEPLSAVPL 285
++R+ + + + V+ + R I + S G ++ SSSG IEP + V +
Sbjct: 174 SMLRSSSASKMLSDTIVTIRNDRFVIPVKQEYRSSYGGIVHDTSSSGATLFIEPQAIVDM 233
Query: 286 NDELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTS 345
N+ LQQA+ + E +L LTE EI + + + LD + A+A Y+ + T
Sbjct: 234 NNSLQQAKVKEKQEIERILRMLTEHTAEHTQEIAQDVEVLQTLDFIFAKARYAKAMKATK 293
Query: 346 PNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKTQQAWKDLESAN 405
P + + I L KA HPLL Q Q D+E
Sbjct: 294 PLM----------------------NGDGFIRLKKARHPLLPQD-----QVVANDIE--- 323
Query: 406 TELRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGPNTG 465
GG+ + +VITGPNTG
Sbjct: 324 --------LGGDYS------------------------------------TIVITGPNTG 339
Query: 466 GKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQI 525
GKT+ LKT+GL +MA++GLHI + E ++ FD+VFADIGDEQS+ QSLSTFS H+ I
Sbjct: 340 GKTVTLKTLGLLTIMAQAGLHIPADEGSEAAVFDNVFADIGDEQSIEQSLSTFSSHMVNI 399
Query: 526 GNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKY 585
NI+ + SLVL DE+GAGT+P EG AL MS+L+ + + + +ATTH+ ELK Y
Sbjct: 400 VNILKDVSENSLVLFDELGAGTDPQEGAALAMSILDEVHRTNARV-LATTHYPELKAYGY 458
Query: 586 SNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAE 645
+ NA +EFD L PTYK+L GVPGRS+A I+ RLGLP ++ A+ A E
Sbjct: 459 NRQGVMNASVEFDIETLSPTYKLLIGVPGRSNAFEISRRLGLPEHIIGQAKSEMTAEHNE 518
Query: 646 INEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNL 681
++ +I +E+ K + E + E + LHK+L
Sbjct: 519 VDLMIASLEKSKKRADEELSETESIRKEAEKLHKDL 554
>sp|Q1WT38|MUTS2_LACS1 MutS2 protein OS=Lactobacillus salivarius (strain UCC118) GN=mutS2
PE=3 SV=1
Length = 786
Score = 258 bits (658), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 221/788 (28%), Positives = 366/788 (46%), Gaps = 135/788 (17%)
Query: 54 LRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIEMQKHGSCS 113
L+ LE+DK+ ++ +F TS+G+ L + Y DE + ++ K G+
Sbjct: 6 LKTLEYDKVKQNLYAFTTTSMGKR--LIDKLEPSSDY-------DEISNSLAQTKDGADI 56
Query: 114 LDLTG----VDLSLVKSAIREVRRASPLRPNEALAVVALLQFSETLQLSLRAAIKEDADL 169
L + G +L +KS ++ + L E A+ +L+ + + K+ AD
Sbjct: 57 LRIKGGIPVPNLISIKSFLKRLDIGGTLNSKELAAIGRVLRATN----EVNRFFKDLADN 112
Query: 170 YIRFMPLTQMIMQLFVNRSLIKSIMQVVDEDGSIKDSASPALKQSRGQVQMLERKLYQLM 229
I+ L + +L + K ++ ++ DG + D AS LK R Q+ + E + + +
Sbjct: 113 KIKLEVLFDDVAKLESLPEISKKLLVSIENDGHVTDDASTLLKSIRQQISVTEETIRERL 172
Query: 230 DMLIRNENNESLFLEVSSIHG-RLCIRTGADQLS-FKGLL--LSSSGIGSVIEPLSAVPL 285
+ R N++ L V +I R + + S F G++ SSSG +EP V L
Sbjct: 173 NAYTRGTNSKYLSNAVVTIRNERYVLPVKQEYRSKFGGIVHDQSSSGQTLFVEPAVIVEL 232
Query: 286 NDELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTS 345
N+ L+Q + + + +L L++++ E+ + LD +NA+A Y+ S T
Sbjct: 233 NNRLRQQQVAEREEINRILEELSKELAPYTHELNNNAKILGMLDFINAKAKYAHSIKAT- 291
Query: 346 PNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKTQQAWKDLESAN 405
EP+ SK E +YL + +HPL
Sbjct: 292 ---------------EPILSK------ENDVYLRQVWHPL-------------------- 310
Query: 406 TELRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGPNTG 465
L++ V DI I + + +VITGPNTG
Sbjct: 311 --------------------------------LDMKKAVKNDIMIGKDYQAIVITGPNTG 338
Query: 466 GKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQI 525
GKTI LKT+GL +M +SGL+I + E +++ FD +FADIGDEQS+ QSLSTFS H+ I
Sbjct: 339 GKTITLKTLGLVQLMGQSGLYIPAFEESRIGIFDDIFADIGDEQSIEQSLSTFSSHMTNI 398
Query: 526 GNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKY 585
I+ +SLVL DE+GAGT+P EG AL +S+L+A GS + +ATTH+ ELK +
Sbjct: 399 VEILKGIDEKSLVLFDELGAGTDPQEGAALAISILDAVGAKGSYV-VATTHYPELKAYGF 457
Query: 586 SNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAE 645
NA MEFD L+PTY++L G+PGRS+A +I++RLGL ++V ARQL S +
Sbjct: 458 ERPNTINASMEFDANTLQPTYRLLIGIPGRSNAFDISQRLGLDKMIVMAARQLTSQDSQD 517
Query: 646 INEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISD 705
+NE+I ++ + E R +L + LH + LE Q R+ + + +
Sbjct: 518 LNEMISDLVAKRHDAEEKEIMYRKYLREAEELHHD--------LETNFHQFERQKENMLE 569
Query: 706 AAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQ 765
A + A Q+ + + ++++ SA+ ++ + Q + + Q+
Sbjct: 570 QA-------KERANQIVEETKKKSDELISELRKMKMSAASNIEEGSLIDAQGRVNALHQE 622
Query: 766 TTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIV 825
T + K + V++ KQ + PN D V V+S+G++G +++
Sbjct: 623 TNLKK--------NKVLRKAKQQQELH----PN--DDVMVNSYGQRGVLLR--------- 659
Query: 826 VQVGNMKW 833
+ GN W
Sbjct: 660 -KAGNHAW 666
>sp|B9DPU2|MUTS2_STACT MutS2 protein OS=Staphylococcus carnosus (strain TM300) GN=mutS2
PE=3 SV=1
Length = 782
Score = 257 bits (657), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 225/797 (28%), Positives = 380/797 (47%), Gaps = 127/797 (15%)
Query: 52 ESLRVLEWDKLCHSVSSFARTSLGR--EATLTQLWSINQTYQDSLRLLDETNAAIEM-QK 108
++L VL++DK+ V + A + LGR A +T Y+ + ++ET+ ++ K
Sbjct: 4 KTLDVLDFDKIKAQVENEAVSDLGRVKAAAMTPASD----YETVVFQMNETDELSQIYNK 59
Query: 109 HGSCSLDLTGVDLSLVKSAIREVRRASPLRPNEALAVVALLQFSETLQLSLRAAIKEDAD 168
H SL +G L+ VK I + S L E + L+Q + ++E+
Sbjct: 60 HRLPSL--SG--LTEVKPLIHRAKIGSILNVRELNQIKRLIQVQNQYKTFYSQLLEEEE- 114
Query: 169 LYIRFMPLTQMIMQLFVNRSLIKSIMQVVDEDGSIKDSASPALKQSRGQVQMLERKLYQL 228
I + L + + QL + L + I Q D + D AS L+ R ++ +++ Q
Sbjct: 115 -AINYPILDERMAQLPILTDLYQEIHQKCDA-YDLFDDASHELQSIRSRIHSTSQRIKQN 172
Query: 229 MDMLIRNENNESLFLE--VSSIHGRLCIRTGAD-QLSFKGLL--LSSSGIGSVIEPLSAV 283
+D ++++++N+ + ++ + R I A+ + F G++ SSSG IEP + V
Sbjct: 173 LDRIVKSQSNQKKLSDAIITVRNDRHVIPVKAEYRQDFNGIVHDQSSSGQTLYIEPSAVV 232
Query: 284 PLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGG 343
+N+++ + R E +L L+ ++ + D + + Q+D + A+A Y S G
Sbjct: 233 EMNNKISRLRNDEKVEVERILSVLSGEVAAEADACLIAESVMGQIDFLTAKARYGQSIKG 292
Query: 344 TSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKTQQAWKDLES 403
T P E +YLPKA+HPL
Sbjct: 293 TKPEFT----------------------EERNVYLPKAFHPL------------------ 312
Query: 404 ANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGPN 463
L+ A V I A + ++ITGPN
Sbjct: 313 ----------------------------------LDRATVVANTIEFAEDIQTVIITGPN 338
Query: 464 TGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLK 523
TGGKT+ LKT+GL ++MA+SGL I + + +K+ FD+V+ DIGDEQS+ QSLSTFS H+K
Sbjct: 339 TGGKTVTLKTLGLIIVMAQSGLLIPALDGSKLSVFDNVYCDIGDEQSIEQSLSTFSSHMK 398
Query: 524 QIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTL 583
I I+ + SL+L DE+GAGT+P EG AL MS+L+ + GSL+ +ATTH+ ELK
Sbjct: 399 NIVEILKHADHNSLILFDELGAGTDPSEGAALAMSILDHVQKLGSLV-MATTHYPELKAY 457
Query: 584 KYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAAS 643
Y+ + NA +EFD L PTYK+L GVPGRS+A I+ +LGL G +++ A+ L G
Sbjct: 458 SYNREGVMNASVEFDVNILSPTYKLLMGVPGRSNAFEISSKLGLSGNIIREAKSLIGQDE 517
Query: 644 AEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKI 703
EIN +I +E + + E L ++ +H +L + ++ Q + K Q +
Sbjct: 518 QEINNMIASLETNAKKVEDQRIELDRLLREAKQVHGDLNK------KYEQYQNYEK-QLM 570
Query: 704 SDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNF 763
DA K+ Q++ + +A ++ K + +R + + ++ + + L +
Sbjct: 571 DDAKV-------KANQRVKAATKEADDII-KDLRHMRDEKNAEVKEHELIEKRKHLDEQY 622
Query: 764 QQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEE 823
+ T DIKQ+ + ++ + GD V V ++G+KG V+++ +E
Sbjct: 623 EGT-----------------DIKQNVKKQKWDEIQAGDEVKVLTYGQKGEVLEI-LDDDE 664
Query: 824 IVVQVGNMKWIMKFTDI 840
VVQ+G +K + D+
Sbjct: 665 AVVQMGIIKMKLPIADL 681
>sp|A9KR74|MUTS2_CLOPH MutS2 protein OS=Clostridium phytofermentans (strain ATCC 700394 /
DSM 18823 / ISDg) GN=mutS2 PE=3 SV=1
Length = 796
Score = 254 bits (650), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 224/816 (27%), Positives = 373/816 (45%), Gaps = 158/816 (19%)
Query: 52 ESLRVLEWDKLCHSVSSFARTSLGREAT-----LTQLWSINQTYQDSLRLLDETNAAIEM 106
++LR LE+ K+ +S+ A +SLGRE L +L I Q Q++ T+A +
Sbjct: 4 KALRTLEYHKIIEKLSALAGSSLGREKCHQLLPLVKLEDIVQMQQET------TDALTRL 57
Query: 107 QKHGSCSLDLTGVDLSLVKSAIREVRRA-SPLRPNEALAVVALLQFSETLQLSLRAA--- 162
G+ S S I ++R L +L LL+ S L +LRA
Sbjct: 58 YAKGTLSF-----------SGIPDIRDTLMRLEIGASLGAGELLKISSVLTATLRAKNYG 106
Query: 163 --------IKEDAD--LYIRFM---PLTQMIMQLFVNRSLIKSIMQVVDEDGSIKDSASP 209
+E A L RF PL+ +N + + I+ + I D ASP
Sbjct: 107 YNQKNNEETEEAAQDTLTERFHLLEPLSP------INNEIRRCIIS----EEEIADDASP 156
Query: 210 ALKQSRGQVQMLERKLYQLMDMLIRNENNESLFLE--VSSIHGRLCIRTGAD-QLSFKGL 266
LK R Q+++ K+++ + ++ + + + + + ++ +GR C+ + + +F+G+
Sbjct: 157 GLKSVRRQIKITNDKIHESLGSILNSASTKGMLQDAIITMRNGRYCLPIKQEYKNTFQGM 216
Query: 267 LLSSSGIGSV--IEPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNG 324
+ S GS IEP++ V LN+EL + + E +L L+ + + ++
Sbjct: 217 MHDQSSTGSTAFIEPMAIVKLNNELAELAVREQEEIEKILAELSNLVATEKYNLKYNQTT 276
Query: 325 IIQLDVVNARATYSLSFGGTSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHP 384
+ +LD + ARA L ++MK S H + R + I + K HP
Sbjct: 277 LAELDFIFARAG-------------LSKNMKASQPH--------FNNRHY-INIKKGRHP 314
Query: 385 LLLQQHKQKTQQAWKDLESANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPV 444
L + P ++ V
Sbjct: 315 L------------------------------------------IDPKKV----------V 322
Query: 445 PIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFAD 504
PIDI+ K +LVITGPNTGGKT+ LKTVGL +M ++GLHI + + +++ F+ V+AD
Sbjct: 323 PIDIYFGDKFDLLVITGPNTGGKTVSLKTVGLFTLMGQAGLHIPAFDGSELSIFEEVYAD 382
Query: 505 IGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFA 564
IGDEQS+ QSLSTFS H+ +I+ + SLVL DE+GAGT+P EG AL M++L ++
Sbjct: 383 IGDEQSIEQSLSTFSSHMTNTVSILEHANENSLVLFDELGAGTDPTEGAALAMAIL-SYL 441
Query: 565 ESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAER 624
+ T+ATTH+ ELK S D NAC EF L+PTY++L G+PG+S+A I+ +
Sbjct: 442 HQRKIRTMATTHYSELKIFALSTDGVSNACCEFSVETLQPTYRLLIGIPGKSNAFAISSK 501
Query: 625 LGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRT 684
LGL +++ AR+ G +VI +E + + EA + K +
Sbjct: 502 LGLSNYIIEKAREFIGTKDESFEDVISNLEASRIAMEKDKAEAEQY-------KKEVEEL 554
Query: 685 RRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSAS 744
+RK+ E K KI DA + + + A + +AR+++ Q+ + A
Sbjct: 555 KRKLAE--------KNSKIDDA----KDRILREANE------KARTIL----QEAKDYAD 592
Query: 745 QSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVH 804
+++ + E SS+V K++ + + VGD VH
Sbjct: 593 ETIRKYNKWGAGGANNKEMENERAALREKLGDTDSSLVSKAKKNRKQHKPSDFKVGDSVH 652
Query: 805 VSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 840
V S KG+V + +K ++ VQ+G ++ ++ +D+
Sbjct: 653 VISLNLKGSVSTLPNAKGDLYVQMGILRSLVNISDL 688
>sp|A4XK62|MUTS2_CALS8 MutS2 protein OS=Caldicellulosiruptor saccharolyticus (strain ATCC
43494 / DSM 8903) GN=mutS2 PE=3 SV=1
Length = 787
Score = 253 bits (645), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 222/796 (27%), Positives = 381/796 (47%), Gaps = 124/796 (15%)
Query: 52 ESLRVLEWDKLCHSVSSFARTSLGREATLTQLWSIN-QTYQDSLRLLDETNAAIEMQKHG 110
++L+ LE+DK+ + + A+++ +E + S N ++ L +DE + K+G
Sbjct: 4 KTLKALEYDKIVEILKNMAKSTPAKEYFENLIPSTNLADIENELNKVDEGYRYV--LKYG 61
Query: 111 SC-SLDLTGVDLSLVKSAIREVRRASPLRPNEALAVVALLQFSETLQLSLRAAIKEDADL 169
+ +L+ + SL KS + + L P+E L + +L+ S +R+ + D
Sbjct: 62 NPPTLEFENILPSLKKSKL-----GATLNPHEILQIGKVLKLS----YEMRSYLSYTQD- 111
Query: 170 YIRFMPLTQMIMQLFVNRSLIKSIMQVVDEDGSIKDSASPALKQSRGQVQMLERKLYQLM 229
F L M +L + +I I Q I D+ASP LK+ R +++ LE ++ +
Sbjct: 112 ---FSFLESMKKRLVNLKEVISRIDQTFLTADEILDTASPRLKEIRDRIRKLESRIRDEL 168
Query: 230 DMLIRNENNESLFLE-VSSIHG-RLCIRTGAD-QLSFKGLLLSSSGIGSV--IEPLSAVP 284
+ +IR+ + E + +I G +L + A+ + KG++ S G+ +EP V
Sbjct: 169 NSMIRDPKIQRFLQEPIITIRGEKLLLPVKAEFRNEVKGIVHDQSATGATLFVEPFVCVE 228
Query: 285 LNDELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGT 344
++++++ ++ + E +L ++ + DEIE +++LD+V +A ++ +
Sbjct: 229 ISNQIRILKSQEKEEIERILQEISSLIASYCDEIETSFYALVELDIVFTKAIWAKEMNAS 288
Query: 345 SPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKTQQAWKDLESA 404
+PV +++S I L KA HPL+
Sbjct: 289 ----------------KPV---INTS---GIINLKKARHPLI------------------ 308
Query: 405 NTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGPNT 464
+KD VPIDI + + VL+ITGPNT
Sbjct: 309 ------------------QKD----------------KVVPIDIHLGKDFDVLIITGPNT 334
Query: 465 GGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQ 524
GGKT+ LKTVGL ++ +SG+ I + E +++ F +FADIGD+QS+ QSLSTFS H+K
Sbjct: 335 GGKTVTLKTVGLFCLLCQSGIFIPADEDSQLCIFQKIFADIGDDQSIVQSLSTFSAHMKN 394
Query: 525 IGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLK 584
I I + ++LVLLDEIGAGT+P EG AL ++L+ +E GS + IATTH+GELK
Sbjct: 395 IIEITKNADDKTLVLLDEIGAGTDPEEGAALAKAILKYLSEKGSKV-IATTHYGELKIFA 453
Query: 585 YSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASA 644
D FENA EFD LKPTY++L G+PGRS+A+ I+ LGL +V+ AR +
Sbjct: 454 QQEDRFENASCEFDVKTLKPTYRLLIGIPGRSNALVISSNLGLDKGIVEMARGYLSQKTI 513
Query: 645 EINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKIS 704
+++ +I EME+ + + E++ AR + ++ L +++ +R RK
Sbjct: 514 DLDRIINEMEQKRKEAEENLELARKLKLEAQALKAAYEEEKKRF--ETERERIRK----- 566
Query: 705 DAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQ 764
A A+ +V ++ ++ R L A+ L+ K + + ++ S Q
Sbjct: 567 KAINEAKEIVERAQYEIENLFKDLRKL----AENLKEKEVLKELEEKKREYERLIQSISQ 622
Query: 765 QTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEI 824
Q + + + +++I+ +G V+V SF G V + SK +
Sbjct: 623 QEK----QEAESKTKKTLQNIR------------LGQKVYVRSFDAVGFVESLPDSKGNL 666
Query: 825 VVQVGNMKWIMKFTDI 840
VQ+G MK + +DI
Sbjct: 667 TVQIGIMKLNVNISDI 682
>sp|Q5WEK0|MUTS2_BACSK MutS2 protein OS=Bacillus clausii (strain KSM-K16) GN=mutS2 PE=3
SV=1
Length = 787
Score = 252 bits (643), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 223/794 (28%), Positives = 377/794 (47%), Gaps = 123/794 (15%)
Query: 55 RVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAA---IEMQKHGS 111
RVLE++K+ + +SLGR+ + S + ++ L DET A + ++ H
Sbjct: 6 RVLEYNKMKQQLLEHVASSLGRQKVNELVPST--SLEEVRHLQDETAEAANVLRLKGH-- 61
Query: 112 CSLDLTGVDLSLVKSAIREVRRASPLRPNEALAVVALLQFSETLQLSLRAAIKEDADLYI 171
+ L G+ S V+ I+ L E + + + L + ++ + I+ D +I
Sbjct: 62 --VPLGGI--SDVRPHIKRAAIGGVLSATELIEIASTLYGGKRVKQFIETIIE---DGHI 114
Query: 172 RFMPLTQMIMQLFVNRSLIKSIMQVVDEDGSIKDSASPALKQSRGQVQMLERKLYQLMDM 231
L + Q+ + K+I Q +D++G + DSAS +L+ R Q++ E + +D
Sbjct: 115 EVPILAGHVEQIEPLSPIEKAIKQCIDDNGYVLDSASTSLRTVRHQIRSYESGIKSKLDQ 174
Query: 232 LIRNENNESLFLE--VSSIHGRLCIRTGAD-QLSFKGLL--LSSSGIGSVIEPLSAVPLN 286
L R+ N + + V+ R + + + +F G++ SSSG IEP + V LN
Sbjct: 175 LTRSSNTRKMLSDAIVTIRSDRYVLPVKQEYRGTFGGIVHDQSSSGATLFIEPAAIVTLN 234
Query: 287 DELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSP 346
++L +A+A + E +L L+ K+ + +++ ++ + QLD + A+A Y+ + P
Sbjct: 235 NQLTEAKAKEKREIERILRELSAKVAEESEQLLLNVDKLAQLDFICAKAYYAKAVKAVKP 294
Query: 347 NIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKTQQAWKDLESANT 406
+ ++R + + L +A HPLL
Sbjct: 295 TL---------------------NDRGY-LDLRQARHPLL-------------------- 312
Query: 407 ELRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGPNTGG 466
+ PS+M + + R LVITGPNTGG
Sbjct: 313 -----------------PPDKVVPSDMAI---------------GDQVRSLVITGPNTGG 340
Query: 467 KTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIG 526
KT+ LKT+GL +MA+SGL + ++E ++ F+ +FADIGDEQS+ QSLSTFS H+K I
Sbjct: 341 KTVTLKTIGLLTLMAQSGLFVPAAEETELAVFEHIFADIGDEQSIEQSLSTFSSHMKNIV 400
Query: 527 NIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYS 586
+I+++ SL+L DE+GAGT+P EG AL +S+L+ + G+ L +ATTH+ ELK Y+
Sbjct: 401 SILNEMNENSLILFDELGAGTDPTEGAALAISILDHVYKRGA-LAVATTHYSELKGYAYN 459
Query: 587 NDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEI 646
+ NA +EFD L+PTY++L GVPGRS+A I+ RLGL ++ A+ + ++++
Sbjct: 460 REGALNASVEFDVETLRPTYRLLVGVPGRSNAFAISRRLGLDERIIDQAKLQIDSDASQV 519
Query: 647 NEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDA 706
++I +E + A + L ++L +R +++ +A
Sbjct: 520 EKMIASLEDSQKSAQSEWSRAEAVRREAEALKRDL------------EKRMASFEEMKEA 567
Query: 707 AAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQT 766
A + A+++ +A + L+ +LR L V +H L +Q
Sbjct: 568 AL---QKAEQKAEKVVAAAQENAELI---ISELR-----DLQKQGVAVKEHQLIEARKQL 616
Query: 767 TVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVV 826
+ P S + KQ+ + KR LP GD V V SF +KGTV+K + E V
Sbjct: 617 ---EEAAPKLVSKKRKQVKKQAEKAKR--LPEPGDEVKVLSFNQKGTVVK-KIGDNEYQV 670
Query: 827 QVGNMKWIMKFTDI 840
Q+G MK + DI
Sbjct: 671 QLGIMKMAVPIDDI 684
>sp|Q5HQ30|MUTS2_STAEQ MutS2 protein OS=Staphylococcus epidermidis (strain ATCC 35984 /
RP62A) GN=mutS2 PE=3 SV=1
Length = 782
Score = 249 bits (636), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 227/795 (28%), Positives = 369/795 (46%), Gaps = 123/795 (15%)
Query: 52 ESLRVLEWDKLCHSVSSFARTSLGREATLTQLWSIN-QTYQDSLRLLDETNAAIEMQKHG 110
++L VLE++K+ V+ + LGRE + N T + + DE + KH
Sbjct: 4 KTLDVLEFEKIKSFVADETISDLGREKVQEMAPASNFDTVEFQMNETDEISQI--YNKHR 61
Query: 111 SCSLDLTGVDLSLVKSAIREVRRASPLRPNEALAVVALLQFSETLQLSLRAAIKEDADLY 170
SL +G L+ V + L E + L+Q + ++ED +
Sbjct: 62 LPSL--SG--LAKVSPLVHRASIGGVLNVAELNRIKRLVQVQNQFKTFYNQMLEEDEE-- 115
Query: 171 IRFMPLTQMIMQLFVNRSLIKSIMQVVDEDGSIKDSASPALKQSRGQVQMLERKLYQLMD 230
+++ L + L + L K I + D + D AS L+ R ++ +++ Q +D
Sbjct: 116 VKYPILHDKMNHLPILTDLFKEINETCDAH-DLFDHASYTLQSIRSKISRTNQRIRQNLD 174
Query: 231 MLIRNENNESLFLE--VSSIHGRLCIRTGAD-QLSFKGLL--LSSSGIGSVIEPLSAVPL 285
+++N+ N+ + V+ + R I A+ + F G++ S+SG IEP S V +
Sbjct: 175 RIVKNQGNQKKLSDAIVTVRNDRNVIPVKAEYRQDFNGIVHDQSASGQTLYIEPNSVVEM 234
Query: 286 NDELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTS 345
N+++ + R E +L LT + + D + + + Q+D + A+A Y+ + GT
Sbjct: 235 NNQISRLRNDEAVERERILTELTGFVSAEADALLIAESVMGQIDFLIAKARYARTIKGTK 294
Query: 346 PNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKTQQAWKDLESAN 405
P + + TIYLP A+HPLL KD AN
Sbjct: 295 PTF----------------------KEDRTIYLPNAFHPLL-----------DKDTVVAN 321
Query: 406 TELRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGPNTG 465
T +E V ++ITGPNTG
Sbjct: 322 T-------------------------------IEFIDDV----------ETVIITGPNTG 340
Query: 466 GKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQI 525
GKT+ LKT+GL ++MA+SGL I + + +++ F++V+ DIGDEQS+ QSLSTFS H+K I
Sbjct: 341 GKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSIFENVYCDIGDEQSIEQSLSTFSSHMKNI 400
Query: 526 GNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKY 585
I+ + SL+L DE+GAGT+P EG AL MS+L+ GSL+ +ATTH+ ELK Y
Sbjct: 401 VEILQDADQNSLILFDELGAGTDPSEGAALAMSILDYVRRLGSLV-MATTHYPELKAYSY 459
Query: 586 SNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAE 645
+ + NA +EFD L PTYK+L GVPGRS+A +I+++LGL ++ A+ + G E
Sbjct: 460 NREGVMNASVEFDVETLSPTYKLLMGVPGRSNAFDISKKLGLSLNIINKAKTMIGTDEQE 519
Query: 646 INEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISD 705
IN +I +E+ + + E + ++ H L + ++ + S + D
Sbjct: 520 INAMIESLEQNSKRVDQQRIELDRLVREAQQTHDALSKQYQQYQNYETS--------LMD 571
Query: 706 AAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQ 765
A + A Q SA++ + K + LR + +H L +Q
Sbjct: 572 EAK-------EKANQRVKSATKEADEILKELRNLRDHKGAEV-------KEHELIDKKKQ 617
Query: 766 TTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIV 825
D+ E VK IKQ + K+ + + GD V V S+G+KG V+++ EE V
Sbjct: 618 LD-DQYE---------VKSIKQHVQKKKYDTIHTGDEVKVLSYGQKGEVLEL-VGDEEAV 666
Query: 826 VQVGNMKWIMKFTDI 840
VQ+G +K + D+
Sbjct: 667 VQMGIIKMKLPIEDL 681
>sp|Q67QE3|MUTS2_SYMTH MutS2 protein OS=Symbiobacterium thermophilum (strain T / IAM
14863) GN=mutS2 PE=3 SV=1
Length = 793
Score = 248 bits (634), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 228/802 (28%), Positives = 353/802 (44%), Gaps = 140/802 (17%)
Query: 53 SLRVLEWDKLCHSVSSFARTSLGRE-----ATLTQLWSINQTYQDSLRLLDETNAAIEMQ 107
+LR LE+ K+ ++ TSLGRE A T + ET+ A +
Sbjct: 5 TLRTLEFAKIKEMLAERTATSLGREVVESLAPATDFLEVQHRQA-------ETSEARRLY 57
Query: 108 KHGSCSLDLTGVDLSLVKSAIREVRRASPLRPNEALAVVALLQFSETLQLSLRAAIKEDA 167
+ G ++ L G L +++ ++ R L P + L V S L+ L +E
Sbjct: 58 E-GGHAIPLGG--LHDLRAHVQRAVRGGVLDPGDLLDVADTAASSRRLKRFL----EEQE 110
Query: 168 DLYIRFMPLTQMIMQLFVNRSLIKSIMQVVDEDGSIKDSASPALKQSRGQVQMLERKLYQ 227
L I LT + L L I Q VDE G ++D ASPAL + R +++L+ ++ +
Sbjct: 111 GLPI----LTALSRMLGTFHHLEAEIRQAVDEHGEVRDDASPALAEIRRSMRILQNRMKE 166
Query: 228 LMDMLIRNENNESLFLEVSSI-HGRLCIRTGAD-QLSFKGLLLSSSGIGSV--IEPLSAV 283
+D +R + L + +I GR + + + G++ S GS IEP++ V
Sbjct: 167 RLDAFVRGSAAKYLQDPIVTIREGRFVVPVKIEYRAQVPGIVHDQSASGSTLFIEPMAIV 226
Query: 284 PLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGG 343
+N++L++ + E +L L+ + + D + L + Q+D +A+ SL
Sbjct: 227 EMNNDLRELALKEHEEVERILARLSSLVAGEADALLDTLQAVAQIDFASAKGKLSLDLDC 286
Query: 344 TSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKTQQAWKDLES 403
T P + RE + + K HPLL
Sbjct: 287 TEPELV----------------------REPILEIHKGRHPLL----------------- 307
Query: 404 ANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGPN 463
KG + P ++ + + D + ITGPN
Sbjct: 308 -----------------KG----RVVPIDVHIG-------ITFDTLV--------ITGPN 331
Query: 464 TGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLK 523
TGGKT+ LKT+GL V+MA++GLH+ + +V F VF DIGDEQS+ QSLSTFSGH+
Sbjct: 332 TGGKTVALKTMGLFVLMAQAGLHLPAGHGTRVGVFQQVFVDIGDEQSIEQSLSTFSGHMT 391
Query: 524 QIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTL 583
I I+ +LVLLDE+GAGT+P EG AL MS+LE + G+ T+ATTH+ ELKT
Sbjct: 392 NIIRILDALEGPALVLLDELGAGTDPTEGAALAMSILEHLHKRGA-KTVATTHYSELKTY 450
Query: 584 KYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAAS 643
Y+ ENA +EFD L+PT+++L GVPG S+A I+ RLGL +V ARQ
Sbjct: 451 AYTRSRVENASVEFDVETLRPTFRLLIGVPGSSNAFEISRRLGLSPHIVDRARQF----- 505
Query: 644 AEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQRFRK--VQ 701
+ E ER + ++ +H R L R L +QR R+ +
Sbjct: 506 -----LTQEQERVE-DLIQGIHATRAELEKERAEAHRL---------RAEAQRMREEYER 550
Query: 702 KISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTS 761
+ DA A V K+ Q A Q + + A+ + Q+L + + + S
Sbjct: 551 RYGDAQRKAAETVEKARAQ----AQQILATARREAEAVIAELKQALREQREAERMQAIQS 606
Query: 762 NFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELP---NVGDLVHVSSFGKKGTVIKVE 818
+ A A +V ++ +R E+P GD V V S G V+
Sbjct: 607 ARSRL--------ARARQAVEPTEEEQRARRRGEVPRGLKPGDKVRVVSLDTTGYVLSEP 658
Query: 819 PSKEEIVVQVGNMKWIMKFTDI 840
+ ++VQ G +K + TD+
Sbjct: 659 DADGNVLVQAGILKMTVSLTDL 680
>sp|Q8CPL6|MUTS2_STAES MutS2 protein OS=Staphylococcus epidermidis (strain ATCC 12228)
GN=mutS2 PE=3 SV=1
Length = 782
Score = 248 bits (634), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 228/798 (28%), Positives = 371/798 (46%), Gaps = 129/798 (16%)
Query: 52 ESLRVLEWDKLCHSVSSFARTSLGREATLTQLWSIN-QTYQDSLRLLDETNAAIEMQKHG 110
++L VLE++K+ V+ + LGRE + N T + + DE + KH
Sbjct: 4 KTLDVLEFEKIKSFVADETISDLGREKVQEMAPASNFDTVEFQMNETDEISQI--YNKHR 61
Query: 111 SCSLDLTGVDLSLVKSAIREVRRASPLRPNEALAVVALLQFSETLQLSLRAAIKEDADLY 170
SL +G L+ V + L E + L+Q + ++ED +
Sbjct: 62 LPSL--SG--LAKVSPLVHRASIGGVLNVGELNRIKRLVQVQNQFKTFYNQMLEEDEE-- 115
Query: 171 IRFMPLTQMIMQLFVNRSLIKSIMQVVDEDGSIKDSASPALKQSRGQVQMLERKLYQLMD 230
+++ L + L + L K I + D + D AS L+ R ++ +++ Q +D
Sbjct: 116 VKYPILHDKMNHLPILTDLFKEINEKCDAH-DLFDHASYTLQSIRSKISRTNQRIRQNLD 174
Query: 231 MLIRNENNESLFLE--VSSIHGRLCIRTGAD-QLSFKGLL--LSSSGIGSVIEPLSAVPL 285
+++N+ N+ + V+ + R I A+ + F G++ S+SG IEP S V +
Sbjct: 175 RIVKNQGNQKKLSDAIVTVRNDRNVIPVKAEYRQDFNGIVHDQSASGQTLYIEPNSVVEM 234
Query: 286 NDELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTS 345
N+++ + R E +L LT + + D + + + Q+D + A+A Y+ + GT
Sbjct: 235 NNQISRLRNDEAVERERILTELTGLVSAESDALLVAESVMGQIDFLIAKARYARTIKGTK 294
Query: 346 PNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKTQQAWKDLESAN 405
P + E TIYLP A+HPLL KD AN
Sbjct: 295 PTF----------------------KEERTIYLPNAFHPLL-----------DKDTVVAN 321
Query: 406 TELRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGPNTG 465
T +E V ++ITGPNTG
Sbjct: 322 T-------------------------------IEFIDDV----------ETVIITGPNTG 340
Query: 466 GKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQI 525
GKT+ LKT+GL ++MA+SGL I + + +++ F++V+ DIGDEQS+ QSLSTFS H+K I
Sbjct: 341 GKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSIFENVYCDIGDEQSIEQSLSTFSSHMKNI 400
Query: 526 GNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKY 585
I+ + SL+L DE+GAGT+P EG AL MS+L+ GSL+ +ATTH+ ELK Y
Sbjct: 401 VEILQDADQNSLILFDELGAGTDPSEGAALAMSILDYVRRLGSLV-MATTHYPELKAYSY 459
Query: 586 SNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAE 645
+ + NA +EFD L PTYK+L GVPGRS+A +I+++LGL ++ A+ + G E
Sbjct: 460 NREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAFDISKKLGLSLNIINKAKTMIGTDEQE 519
Query: 646 INEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISD 705
IN +I +E + + E + ++ H L S+++++ Q
Sbjct: 520 INAMIESLEHNSKRVDQQRIELDRLVREAQETHDAL------------SKQYQQYQNYE- 566
Query: 706 AAAIARSLVHKS---AQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSN 762
+SL+ ++ A Q SA++ + K + LR + +H L
Sbjct: 567 -----KSLMEEAKEKANQRVKSATKEADEILKELRNLRDHKGAEV-------KEHELIDK 614
Query: 763 FQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKE 822
+Q D+ E K IKQ + K+ + + GD V V S+G+KG V+++ E
Sbjct: 615 KKQLD-DQYE---------AKSIKQHVQKKKYDTIHAGDEVKVLSYGQKGEVLEL-VGNE 663
Query: 823 EIVVQVGNMKWIMKFTDI 840
E VVQ+G +K + D+
Sbjct: 664 EAVVQMGIIKMKLPIEDL 681
>sp|Q74KU8|MUTS2_LACJO MutS2 protein OS=Lactobacillus johnsonii (strain CNCM I-12250 / La1
/ NCC 533) GN=mutS2 PE=3 SV=1
Length = 788
Score = 242 bits (617), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 222/793 (27%), Positives = 377/793 (47%), Gaps = 132/793 (16%)
Query: 57 LEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIEMQKHGSCSLDL 116
LE++++ +S A T +E LT + S N DE +I+ + S L +
Sbjct: 9 LEYNRIIKQLSDLAITVPAKEQALTLMPSSN---------FDEVKKSIDQTRVLSNVLRV 59
Query: 117 TG----VDLSLVKSAIREVRRASPLRPNEALAVVALLQFSETLQLSLRAAIKEDADLYIR 172
G D V+++++ ++ + L E + +L ++ +S A E+ ++ R
Sbjct: 60 KGPMPITDFKDVRASLKRLKVKANLNGEELGNIFLILSLAK--DVSQFTADLEEREIDTR 117
Query: 173 FMPLTQMIMQLFVNRSLIKSIMQVVDEDGSIKDSASPALKQSRGQVQMLERKLYQLMDML 232
P+ + + L + L K + Q ++ DG++KD+AS L Q R +Q E + M+
Sbjct: 118 --PIEKTLKNLAIPEDLFKKLNQAIEYDGTVKDTASSKLMQLRHDIQSNETDIKNHMNDY 175
Query: 233 IRNENNESLFLEVSSIH-GRLCIRTGAD-QLSFKGLL--LSSSGIGSVIEPLSAVPLNDE 288
I ++ + L + +I GR + + + F G++ S+SG +EP + + LN+
Sbjct: 176 ISGKHTQYLSENIVTIRDGRYVLPVKQEYKNKFGGVVHDQSASGQTLFVEPQAVLVLNNR 235
Query: 289 LQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNI 348
Q A + +L+ L+E + EI+ + + QLD ++A++ + + T P
Sbjct: 236 QQNLMAQERQEIHRILIELSELAGMYQKEIKNNADALTQLDFLSAKSKLAKAMKATEP-- 293
Query: 349 FLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKTQQAWKDLESANTEL 408
L QD I L KA HPL+
Sbjct: 294 VLNQD--------------------HVIKLRKARHPLI---------------------- 311
Query: 409 RRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGPNTGGKT 468
P ++ VP +I + ++ITGPNTGGKT
Sbjct: 312 --------------------DPKKV----------VPNNIELGTSFDTMLITGPNTGGKT 341
Query: 469 ICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNI 528
I LKT+GL +MA++GL I + E +++ F+ ++ADIGDEQS+ QSLSTFS H+ QI I
Sbjct: 342 ITLKTLGLLQLMAQAGLFITAEEGSQLTVFNEIYADIGDEQSIEQSLSTFSSHMDQIIKI 401
Query: 529 ISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSND 588
+ T LVL+DE+GAGT+P EG +L +++L+ + + + I TTH+ ELK Y+
Sbjct: 402 MKDVTEDDLVLIDELGAGTDPEEGASLAIAILDDLRGAQAKIAI-TTHYPELKLYGYNRA 460
Query: 589 FFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINE 648
NA MEFD KL PTY++ G+PG+S+A IA +LG+ +VV AR L ++IN+
Sbjct: 461 RTTNASMEFDLKKLAPTYRLRIGIPGQSNAFAIAHQLGMNEVVVDKARSLMNDEDSDINK 520
Query: 649 VIIEMERF--KTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDA 706
+I ER +T+ E +HE L +N+ +++ T ++ L++ ++VQK +
Sbjct: 521 MI---ERLTEQTKAAEQLHET-----LKQNVDQSI--TLKRQLQNGLDWYNQQVQKQLEK 570
Query: 707 AAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQT 766
A K+ + L +A +++ +Q R A + KV + + L
Sbjct: 571 AQ------EKADEMLAKKRQKADKIINDLEEQRR--AGGQVRTNKVIEAKGALNKL---- 618
Query: 767 TVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVV 826
+ E+ A + V++ R KR +VGD V V S+G++G + K + + E V
Sbjct: 619 ---ERENQNLAQNKVLQ------REKRRHDVSVGDTVKVLSYGQQGVITK-KLADHEFEV 668
Query: 827 QVGNMKWIMKFTD 839
Q+G +K +K TD
Sbjct: 669 QIGILK--VKVTD 679
>sp|Q88V16|MUTS2_LACPL MutS2 protein OS=Lactobacillus plantarum (strain ATCC BAA-793 /
NCIMB 8826 / WCFS1) GN=mutS2 PE=3 SV=1
Length = 787
Score = 241 bits (615), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 234/803 (29%), Positives = 384/803 (47%), Gaps = 143/803 (17%)
Query: 54 LRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIEMQKHGSCS 113
L LE+ ++ ++ + ++ G++A L +L + + D R LDETN
Sbjct: 6 LNTLEYQQVKQQLAPYLVSATGQQA-LNELHPMT-SVADIQRALDETN------------ 51
Query: 114 LDLTGVDLSLVKSAIREVRRASPLRPN-EALAVVALLQFSETLQLS--LR---------A 161
G ++ +K I V R + ++P+ + LA+ A L SE Q+ LR A
Sbjct: 52 ---DGAEVYRLKGGI-PVARLADIKPHMKRLAIGATLNGSELGQVGRVLRTTRAITRFFA 107
Query: 162 AIKEDA-DLYIRFMPLTQMIMQLFVNRSLIKSIMQVVDEDGSIKDSASPALKQSRGQVQM 220
+ EDA + IR L + +L + K + ++ DG I D ASP L + R ++
Sbjct: 108 ELLEDAPENDIRH--LFDEVAELVTLPDVTKRLATAIEGDGHITDEASPELSRIRSNIRR 165
Query: 221 LERKLYQLMDMLIRNENNESLFLEVSSI-HGRLCIRTGADQLS-FKGLL--LSSSGIGSV 276
E ++ M R + + L + +I + R I A+ S F G++ S+SG
Sbjct: 166 TETEIRNQMGHYTRGHDAKYLSDPIITIRNDRYVIPVKAENRSRFGGIVHDQSASGQTLF 225
Query: 277 IEPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARAT 336
IEP + + +ND L+Q + + + E+ +L L+ + DEI + D +NA+A
Sbjct: 226 IEPQAVMAMNDRLRQNQVAEKQEEQRILEELSNLIAPYQDEIINNAAILGHFDFINAKAR 285
Query: 337 YSLSFGGTSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKTQQ 396
Y+ T P + PQ+ +YL +A HPL
Sbjct: 286 YAHDMKATEPAVS-PQN---------------------EVYLRQARHPL----------- 312
Query: 397 AWKDLESANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRV 456
+ P ++ V DI + +
Sbjct: 313 -------------------------------IDPRKV----------VANDISLGTDYQA 331
Query: 457 LVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLS 516
+VITGPNTGGKTI LKT+GL +MA+SGL I ++V ++ +FADIGDEQS+ Q+LS
Sbjct: 332 MVITGPNTGGKTITLKTLGLLQLMAQSGLFIPVEAGSRVGVYNEIFADIGDEQSIEQNLS 391
Query: 517 TFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTH 576
TFS H++ I + ++Q + SLVL+DE+GAGT+P EG AL +++L+A G+ + +ATTH
Sbjct: 392 TFSSHMENIESFLAQIDAHSLVLVDELGAGTDPQEGAALAIAILDAIGAKGTQV-VATTH 450
Query: 577 HGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNAR 636
+ ELK ++ NA MEFDE LKPTY++L G+PGRS+A++IA+RLG+P +V AR
Sbjct: 451 YPELKAYGFNRPDTINASMEFDEETLKPTYRLLVGIPGRSNALDIAQRLGIPQAIVDQAR 510
Query: 637 QLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQR 696
L S ++N +I ++ + Q + + + S LH+ L E A Q+
Sbjct: 511 SLTDTDSQDLNAMIADLVTKRKQVEDEQLHLKTQVADSEKLHRQLKS------EFNAYQQ 564
Query: 697 FRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQ 756
RK Q I DA A ++V + S ++A +++ ++ S + ++ ++ +
Sbjct: 565 -RKDQLIEDAKVQANTIVEQ-------SKTKADAIISDLRKKQLASGTATVKENELIDAK 616
Query: 757 HVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIK 816
L + QQ P + V++ R K + GD V V S+G++G +++
Sbjct: 617 GALNALEQQ--------PKLKKNRVLR------RAKAQHDFHEGDDVLVKSYGQRGVLMR 662
Query: 817 VEPSKEEIVVQVGNMKWIMKFTD 839
+ K E VQ+G +K MK +D
Sbjct: 663 -QMGKHEWEVQLGILK--MKISD 682
>sp|B8D298|MUTS2_HALOH MutS2 protein OS=Halothermothrix orenii (strain H 168 / OCM 544 /
DSM 9562) GN=mutS2 PE=3 SV=1
Length = 791
Score = 236 bits (602), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 140/395 (35%), Positives = 225/395 (56%), Gaps = 42/395 (10%)
Query: 443 PVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVF 502
PVPIDI + + + LVITGPNTGGKT+ LKTVGL V+M ++GLHI + E + F+ V+
Sbjct: 321 PVPIDITVGNEFKTLVITGPNTGGKTVALKTVGLFVLMVQAGLHIPAEEETVISIFNGVY 380
Query: 503 ADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEA 562
ADIGDEQS+ Q+LSTFS H+ +I + ++ ++SLVLLDEIG GT+P EG ALG+++LE
Sbjct: 381 ADIGDEQSIEQNLSTFSSHINRIKRFLGKADARSLVLLDEIGVGTDPREGAALGVAILEH 440
Query: 563 FAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIA 622
E G + TIATTH+ E+K+ YS D ENA +EFD L+PTY++L G+PG S+A IA
Sbjct: 441 LRERG-VTTIATTHYSEIKSYAYSQDGVENASVEFDMETLQPTYRLLMGIPGGSNAFEIA 499
Query: 623 ERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLL 682
+LGLP ++++ ++L ++ +I ++ E + + L + + L
Sbjct: 500 LKLGLPHDIIKDGKELMSGDDIKVENIISDLN----------EERKKYEQLKIEIEERLE 549
Query: 683 RTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPS 742
++K Q++ + ++D + L+ ++ ++ Q ++ +
Sbjct: 550 AVKKK------EQKYDSL--LTDLEKRKKKLITEAREEAL--------------QIIKKT 587
Query: 743 ASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATAS-SSVVKDI--KQSPRVKRTELPNV 799
+S + KN+ + ++ +D+VE+ + K+I K+ + RT + +
Sbjct: 588 RKESKEILRRLKNKEFAS----RSDIDRVENEINLNLKETEKEISEKRQNKDGRTRVKEI 643
Query: 800 --GDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMK 832
GD V + G+KG VI V+ K E V+Q G MK
Sbjct: 644 SCGDQVRLKKTGQKGEVISVDREKGEAVIQAGIMK 678
Score = 67.4 bits (163), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 147/303 (48%), Gaps = 13/303 (4%)
Query: 53 SLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIEMQKHGSC 112
SL +LE+DK+ V FA T +G+E +++L ++ +L + ++A ++++G
Sbjct: 5 SLEILEFDKIIDRVQEFAATIIGKE-IISRLQPVDNLNYVKNKLREVSSAREILEEYGRP 63
Query: 113 SLDLTGV-DLSLVKSAIREVRRASPLRPNEALAVVALLQ-FSETLQLSLRAAIKEDADLY 170
G+ DL + I + + L E + V + L+ E + S D +L
Sbjct: 64 PF--GGIRDL---REIIEKADKGIVLSVKEVMDVRSTLEGVRELKKYSREIGTGIDDELQ 118
Query: 171 IRFMPLTQMIMQLFVNRSLIKSIMQVVDEDGSIKDSASPALKQSRGQVQMLERKLYQLMD 230
+ +T+ +L + L I + +DE G IKDSAS L+ R ++ +E K+ ++
Sbjct: 119 DIYSIITEKFDRLTPLKQLENEINRCIDEHGEIKDSASRKLRSIRREMDRIEGKINDKLN 178
Query: 231 MLIRNENNESLFLE-VSSIHG-RLCIRTGAD-QLSFKGLL--LSSSGIGSVIEPLSAVPL 285
+I N + + + + +I G R + + + +F G++ S+SG+ +EP++ V L
Sbjct: 179 SIINNTRYQEMLQDKLVTIRGNRYVVPVKSSYKNTFSGIVHDQSTSGLTYFMEPMAIVKL 238
Query: 286 NDELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTS 345
N+ L + + + + +L L+E ++ ++ L + LDV ARA +S+ G
Sbjct: 239 NNRLGELKRAEEQEIYRILKKLSENIKEHTRDLSDNLEMVSLLDVDFARARFSIEIEGIE 298
Query: 346 PNI 348
P I
Sbjct: 299 PGI 301
>sp|P94545|MUTS2_BACSU MutS2 protein OS=Bacillus subtilis (strain 168) GN=mutSB PE=3 SV=2
Length = 785
Score = 235 bits (600), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 232/795 (29%), Positives = 370/795 (46%), Gaps = 127/795 (15%)
Query: 54 LRVLEWDKLCHSVSSFARTSLGREA--TLTQLWSINQTYQDSLRLLDETNAAIEMQKHGS 111
L LE+ K+ V A +SLG+E L SI++ + L +DE + I ++
Sbjct: 6 LSALEFHKVKEQVIGHAASSLGKEMLLELKPSASIDEI-KKQLDEVDEASDIIRLRGQAP 64
Query: 112 CSLDLTGVDLSLVKSAIREVRRASPLRPNEALAVVALLQFSETLQLSLRAAIKEDADLYI 171
L ++ A+R S L P+E + LL + ++ + ++ D+
Sbjct: 65 FG------GLVDIRGALRRAEIGSVLSPSEFTEISGLLYAVKQMKHFITQMAEDGVDI-- 116
Query: 172 RFMPLT-QMIMQLFVNRSLIKSIMQVVDEDGSIKDSASPALKQSRGQVQMLERKLYQLMD 230
PL Q QL L + I +D+ G + D AS L+ R Q++ LE ++ ++
Sbjct: 117 ---PLIHQHAEQLITLSDLERDINSCIDDHGEVLDHASETLRGIRTQLRTLESRVRDRLE 173
Query: 231 MLIRNENNESLFLE--VSSIHGRLCIRTGADQLSFKGLLL---SSSGIGSVIEPLSAVPL 285
++R+ + + + V+ + R I + S G ++ SSSG IEP + V +
Sbjct: 174 SMLRSSSASKMLSDTIVTIRNDRFVIPVKQEYRSSYGGIVHDTSSSGATLFIEPQAIVDM 233
Query: 286 NDELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTS 345
N+ LQQA+ + E +L LTEK +E+ L + LD + A+A Y+ + T
Sbjct: 234 NNSLQQAKVKEKQEIERILRVLTEKTAEYTEELFLDLQVLQTLDFIFAKARYAKAVKAT- 292
Query: 346 PNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKTQQAWKDLESAN 405
+P+ + I L KA HPL
Sbjct: 293 ---------------KPIMNDTG------FIRLKKARHPL-------------------- 311
Query: 406 TELRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGPNTG 465
L P ++ V DI + R +VITGPNTG
Sbjct: 312 ----------------------LPPDQV----------VANDIELGRDFSTIVITGPNTG 339
Query: 466 GKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQI 525
GKT+ LKT+GL +MA+SGLHI + E ++ F+ VFADIGDEQS+ QSLSTFS H+ I
Sbjct: 340 GKTVTLKTLGLLTLMAQSGLHIPADEGSEAAVFEHVFADIGDEQSIEQSLSTFSSHMVNI 399
Query: 526 GNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKY 585
I+ Q SLVL DE+GAGT+P EG AL MS+L+ + + + +ATTH+ ELK Y
Sbjct: 400 VGILEQVNENSLVLFDELGAGTDPQEGAALAMSILDDVHRTNARV-LATTHYPELKAYGY 458
Query: 586 SNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAE 645
+ + NA +EFD L PTYK+L GVPGRS+A I++RLGLP ++ A+ A E
Sbjct: 459 NREGVMNASVEFDIETLSPTYKLLIGVPGRSNAFEISKRLGLPDHIIGQAKSEMTAEHNE 518
Query: 646 INEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISD 705
++ +I +E+ K + E + E + LHK L +++I+E + +K + + +
Sbjct: 519 VDTMIASLEQSKKRAEEELSETESIRKEAEKLHKEL---QQQIIELNS----KKDKMLEE 571
Query: 706 AAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQ 765
A ++A+++ + +A ++H +LR K +H + +
Sbjct: 572 AE-------QQAAEKVKAAMKEAEDIIH----ELRTI-----------KEEHKSFKDHEL 609
Query: 766 TTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIV 825
K A + K ++ KR P GD V V +FG+KGT+++ + E
Sbjct: 610 INAKKRLEGAMPAFEKSKKPEKPKTQKRDFKP--GDEVKVLTFGQKGTLLE-KTGGNEWN 666
Query: 826 VQVGNMKWIMKFTDI 840
VQ+G +K +K D+
Sbjct: 667 VQIGILKMKVKEKDL 681
>sp|A3DE67|MUTS2_CLOTH MutS2 protein OS=Clostridium thermocellum (strain ATCC 27405 / DSM
1237) GN=mutS2 PE=3 SV=1
Length = 793
Score = 234 bits (598), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 147/392 (37%), Positives = 216/392 (55%), Gaps = 32/392 (8%)
Query: 444 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 503
VPID +I LV+TGPNTGGKT+ LKTVGL +M ++GLHI ++E K+ F V+A
Sbjct: 318 VPIDFWIGEDFNTLVVTGPNTGGKTVTLKTVGLFTLMTQAGLHIPANEGTKMSIFKKVYA 377
Query: 504 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 563
DIGDEQS+ QSLSTFS H+K I I+ SLVL DE+GAGT+P EG AL MS+LE
Sbjct: 378 DIGDEQSIEQSLSTFSSHMKNIVGILKDVDEDSLVLFDELGAGTDPTEGAALAMSILEYL 437
Query: 564 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 623
GS T+ATTH+ +LK + F ENAC EF+ L+PTY++L GVPG+S+A I++
Sbjct: 438 RNKGS-TTVATTHYSQLKAYAVTTKFVENACCEFNVETLRPTYRLLIGVPGKSNAFAISK 496
Query: 624 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLR 683
RLGL +++ A++ + ++++ +E+ Q +A + + + L K L
Sbjct: 497 RLGLFDDIIEKAKEFLTQDDIKFEDMLMSIEKNLNQSENEKMKAESYRLEAEKLKKELEE 556
Query: 684 TRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSA 743
+RK+ E+ R R +Q +A A AR ++ ++ ++ S+ R L
Sbjct: 557 QKRKLAEN----RERLIQ---EARAEARKILLEARKEAEEIISKMRRL------------ 597
Query: 744 SQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPR---VKRTELPNVG 800
Q +H + K L ++ VD +E ++ +P+ VK E G
Sbjct: 598 EQEVHNAQRQKEAEELRLKLKR-KVDSIEETL--------ELPLAPKNALVKPPENLKPG 648
Query: 801 DLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMK 832
D V + + +KGTVI E+VVQ G MK
Sbjct: 649 DSVLIVNLDQKGTVITPPDKDGEVVVQAGIMK 680
Score = 55.8 bits (133), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 70/303 (23%), Positives = 145/303 (47%), Gaps = 20/303 (6%)
Query: 52 ESLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIE-MQKHG 110
++L++LE++K+ + S A +SLG+E L + + R ET+ A+ + + G
Sbjct: 4 KTLKILEFNKIIDKLVSLATSSLGKE--LAEKLVPDTDLNRVERAQKETSDAVAFIARRG 61
Query: 111 SCSLDLTGVDLSLVKSAIREVRRASPLRPNEALAVVALLQFSETLQ-LSLRAAIKEDADL 169
+ + + ++ +++ V + L P E L +L+ L+ + IK D D
Sbjct: 62 TPPMG----GIHDIRDSLKRVEIGAILNPGELLKTADVLRAVRNLKSYASNDRIKTDEDN 117
Query: 170 YIRFMPLTQMIMQLFVNRSLIKSI-MQVVDEDGSIKDSASPALKQSRGQVQMLERKLYQL 228
+ +++I L N+ + I M ++ ED I D+ASP L R Q++ + +
Sbjct: 118 IV-----SELIGCLESNKRIEDRIYMSILSED-EIADNASPTLANIRRQIRNAQESIKDK 171
Query: 229 MDMLIRNENNESLFLE-VSSIHG-RLCIRTGAD-QLSFKGLLLSSSGIGSVI--EPLSAV 283
++ +IR+ + E + ++ G R I + + GL+ SS G+ I EP++ V
Sbjct: 172 LNDIIRSSRYQKYIQEPIVTLRGDRYVIPVKQEYRTEIPGLIHDSSASGATIFIEPMAVV 231
Query: 284 PLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGG 343
N+ +++ + E +L LT +++ +D ++ ++ + +LD + A+A SL +
Sbjct: 232 EANNHIRELKIKEQAEIEKILGELTGEIRGIVDSLKSNVSILGRLDFIFAKARLSLDYNC 291
Query: 344 TSP 346
P
Sbjct: 292 VCP 294
>sp|B9DVK7|MUTS2_STRU0 MutS2 protein OS=Streptococcus uberis (strain ATCC BAA-854 / 0140J)
GN=mutS2 PE=3 SV=1
Length = 777
Score = 233 bits (595), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 151/401 (37%), Positives = 232/401 (57%), Gaps = 45/401 (11%)
Query: 440 LAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFD 499
L +PV D+ A V+VITGPNTGGKTI LKT+GLA +M +SGL IL+ E +K+ FD
Sbjct: 307 LKNPVANDLHFADDLAVIVITGPNTGGKTIMLKTLGLAQLMGQSGLPILADEGSKIAVFD 366
Query: 500 SVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSL 559
+++ADIGDEQS+ QSLSTFS H+ I +I+ +S S SLVL DE+GAGT+P EG +L M++
Sbjct: 367 AIYADIGDEQSIEQSLSTFSSHMTHIVDILEESNSNSLVLFDELGAGTDPQEGASLAMAI 426
Query: 560 LEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAI 619
LE + ++ T+ATTH+ ELK +D+ ENA MEFD LKPTY+ + GVPGRS+A
Sbjct: 427 LEQLRLT-NIKTMATTHYPELKAYGIESDYVENASMEFDSQSLKPTYRFMQGVPGRSNAF 485
Query: 620 NIAERLGLPGIVVQNARQLYGAASAEINEVIIEMER---FKTQFLEHVHEARHFLMLSRN 676
IA RLGL +V+ A Q+ S ++N +I E+ER + L+H+ E N
Sbjct: 486 EIARRLGLAETIVKEAEQMTDTDS-DVNRIIEELERQTLSSRRRLDHIREVEQ-----EN 539
Query: 677 LHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRA 736
+ N R +K+ + + ++++K S A L ++++ S +H++A
Sbjct: 540 IKFN--RAVKKLYNEFSLAKDKEIEKASQEAQAIVELALTESEEIL-------SKLHEKA 590
Query: 737 QQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTEL 796
+L+P H K++ ++ V + + K +++
Sbjct: 591 -ELKP------HEIIEAKSK-------LKSLVPQRDLSKNKVLKKAKKLRE--------- 627
Query: 797 PNVGDLVHVSSFGKKGTVI-KVEPSKEEIVVQVGNMKWIMK 836
P +GD + VS++G++GT+I +V+ +K E QVG +K +K
Sbjct: 628 PRIGDDIIVSAYGQRGTLIGQVKGNKWE--AQVGLIKMTLK 666
Score = 33.1 bits (74), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 79/161 (49%), Gaps = 9/161 (5%)
Query: 194 MQVVDEDGSIKDSASPALKQSRGQVQMLERKLYQLM-DMLIRNEN--NESLFLEVSSIHG 250
+Q V++ I++ ASP L + R Q+ ER QL+ D+L +N + +ESL ++S +G
Sbjct: 134 LQAVNDAAFIENFASPELDRLRRQIAENERYSRQLLQDILKKNADYLSESL---IASRNG 190
Query: 251 RLCI---RTGADQLSFKGLLLSSSGIGSVIEPLSAVPLNDELQQARASVTKAEEDVLLAL 307
+ + T ++S +S+SG IEP + V +N+E+ Q A +L L
Sbjct: 191 KSVLPVKNTFRHRVSGVVHDISASGNTVYIEPRALVQVNEEMTQLLADERHEIARILKEL 250
Query: 308 TEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNI 348
++ ++ + + LD V A+ Y ++ T P I
Sbjct: 251 SQLLRPHSRALANNAWLLGHLDFVRAKYHYLVNNKATIPKI 291
>sp|B9MK78|MUTS2_CALBD MutS2 protein OS=Caldicellulosiruptor bescii (strain ATCC BAA-1888
/ DSM 6725 / Z-1320) GN=mutS2 PE=3 SV=1
Length = 787
Score = 232 bits (592), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 218/796 (27%), Positives = 370/796 (46%), Gaps = 124/796 (15%)
Query: 52 ESLRVLEWDKLCHSVSSFARTSLGREATLTQLWSIN-QTYQDSLRLLDETNAAIEMQKHG 110
++L+ LE+DK+ + + A+++ +E + S N ++ L +DE+ + K+G
Sbjct: 4 KTLKALEYDKIVEILKNMAKSTPAKEYFENLIPSTNVADIENELNKVDESYRYV--LKYG 61
Query: 111 SC-SLDLTGVDLSLVKSAIREVRRASPLRPNEALAVVALLQFSETLQLSLRAAIKEDADL 169
+ +L+ + SL KS + + L P+E L + +L+ S ++ L + +D
Sbjct: 62 NLPTLEFENILPSLKKSKL-----GATLNPHEILQIGKVLKLSYEMRTYL--SFTQD--- 111
Query: 170 YIRFMPLTQMIMQLFVNRSLIKSIMQVVDEDGSIKDSASPALKQSRGQVQMLERKLYQLM 229
F L M +L + +I I Q I D+AS LK+ R +++ LE K+ +
Sbjct: 112 ---FSFLESMKKRLVNLKEVISRIDQTFLTPDEILDTASSKLKEIRDKIRKLENKIRDEL 168
Query: 230 DMLIRNENNESLFLE-VSSIHG-RLCIRTGAD-QLSFKGLLLSSSGIGSV--IEPLSAVP 284
+ +IR+ + E + +I G +L + A+ + KG++ S G+ +EP V
Sbjct: 169 NSMIRDPKIQRFLQEPIITIRGEKLLLPVKAEFRNEVKGIVHDQSATGATLFVEPFVCVE 228
Query: 285 LNDELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGT 344
++++++ + + E +L ++ + + IE +++LD+V +A ++ +
Sbjct: 229 ISNQIKILKNQEKEEIERILQEISSLIASYCEVIETSFYALVELDIVFTKAIWAKEMNAS 288
Query: 345 SPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKTQQAWKDLESA 404
P I I L KA HPL+
Sbjct: 289 KPII----------------------NASGIINLKKARHPLI------------------ 308
Query: 405 NTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGPNT 464
+KD +V +++ D+ I ITGPNT
Sbjct: 309 ------------------QKD--------KVVPIDIHLGKDFDVLI--------ITGPNT 334
Query: 465 GGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQ 524
GGKT+ LKTVGL ++ +SG+ I + E +++ F +FADIGD+QS+ QSLSTFS H+K
Sbjct: 335 GGKTVTLKTVGLFCLLCQSGIFIPADEGSELCIFQKIFADIGDDQSIVQSLSTFSAHMKN 394
Query: 525 IGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLK 584
I I + ++LVLLDEIGAGT+P EG AL ++L+ +E GS + IATTH+GELK
Sbjct: 395 IIEITKNADDKTLVLLDEIGAGTDPEEGAALAKAILKYLSEKGSKV-IATTHYGELKIFA 453
Query: 585 YSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASA 644
D FENA EFD LKPTY++L G+PGRS+A+ I+ LGL +V+ AR +
Sbjct: 454 QQEDRFENASCEFDVKTLKPTYRLLIGIPGRSNALVISSNLGLDKGIVEMARGYLSQKTI 513
Query: 645 EINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKIS 704
+++ +I EME+ + + E++ A+ ++ L +++ +R RK
Sbjct: 514 DLDRIINEMEQKRKEAEENLELAQKLKHEAQALKAAYEEEKKRF--ETERERIRK----- 566
Query: 705 DAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQ 764
A A+ +V S ++ R L A+ L+ K + + ++ S Q
Sbjct: 567 KAINEAKEIVESSQYEIENLFKDLRKL----AENLKEKEVLKELEEKKREYERLIQSISQ 622
Query: 765 QTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEI 824
Q VK +S K + +G V+V SF +G V + SK +
Sbjct: 623 Q----------------VKQEAESKTKKTIQNLRLGQKVYVRSFDAEGFVESLPDSKGNL 666
Query: 825 VVQVGNMKWIMKFTDI 840
VQ+G MK + +DI
Sbjct: 667 TVQIGIMKINVNLSDI 682
>sp|Q045P1|MUTS2_LACGA MutS2 protein OS=Lactobacillus gasseri (strain ATCC 33323 / DSM
20243) GN=mutS2 PE=3 SV=1
Length = 791
Score = 230 bits (586), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 218/793 (27%), Positives = 373/793 (47%), Gaps = 132/793 (16%)
Query: 57 LEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIEMQKHGSCSLDL 116
LE++++ +S A T+ + L + S + DE +I+ + S L +
Sbjct: 12 LEYNRIIRQLSDLAITAPAKAQALKLMPSSD---------FDEVKKSIDQTRVLSNILRV 62
Query: 117 TG----VDLSLVKSAIREVRRASPLRPNEALAVVALLQFSETLQLSLRAAIKEDADLYIR 172
G D V+ +++ ++ + L E + +L ++ + A+ E+ ++ R
Sbjct: 63 KGPMPITDFKDVRPSLKRLKVKANLNGEELGNIFLVLSLAK--DVGQFASDLEEREIDTR 120
Query: 173 FMPLTQMIMQLFVNRSLIKSIMQVVDEDGSIKDSASPALKQSRGQVQMLERKLYQLMDML 232
P+ + + L V L K + Q ++ DG++KD+AS L Q R +Q E + M+
Sbjct: 121 --PIEKYLKNLAVPEDLFKKLNQAIEYDGTVKDTASSKLMQLRHDIQSNETDIKNHMNDY 178
Query: 233 IRNENNESLFLEVSSIH-GRLCIRTGAD-QLSFKGLL--LSSSGIGSVIEPLSAVPLNDE 288
I ++ + L + +I GR + + + F G++ S+SG +EP + + LN+
Sbjct: 179 ISGKHTQYLSENIVTIRDGRYVLPVKQEYKNKFGGVVHDQSASGQTLFVEPQAVLVLNNR 238
Query: 289 LQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNI 348
Q A + +L+ L+E EI + QLD ++A++ + T P
Sbjct: 239 QQNLLAQERQEIHRILIELSELAGAYQKEINNNALALTQLDFLSAKSKLAKKMKATEP-- 296
Query: 349 FLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKTQQAWKDLESANTEL 408
L QD I L KA HPL+
Sbjct: 297 VLNQD--------------------HIIKLRKARHPLI---------------------- 314
Query: 409 RRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGPNTGGKT 468
P ++ VP +I + ++ITGPNTGGKT
Sbjct: 315 --------------------DPKKV----------VPNNIELGTTFDTMLITGPNTGGKT 344
Query: 469 ICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNI 528
I LKT+GL +MA++GL I + E +++ F+ ++ADIGDEQS+ QSLSTFS H+ QI I
Sbjct: 345 ITLKTLGLLQLMAQAGLFITAEEGSQLTVFNEIYADIGDEQSIEQSLSTFSSHMDQIIKI 404
Query: 529 ISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSND 588
++ T LVL+DE+GAGT+P EG +L +++L+ ++ + + I TTH+ ELK Y+
Sbjct: 405 MNNVTEDDLVLIDELGAGTDPEEGASLAIAILDDLRQTQAKIAI-TTHYPELKLYGYNRK 463
Query: 589 FFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINE 648
NA MEFD KL PTY++ G+PG+S+A IA +LG+ VV AR L ++IN+
Sbjct: 464 RTTNASMEFDLKKLAPTYRLRIGIPGQSNAFAIAHQLGMNEAVVDKARDLMNDEDSDINK 523
Query: 649 VIIEMERF--KTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDA 706
+I ER +T+ E +HE L +N+ +++ T ++ L++ ++VQK +
Sbjct: 524 MI---ERLTEQTKAAEQLHET-----LKQNVDQSI--TLKRQLQNGLDWYNQQVQKQLEK 573
Query: 707 AAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQT 766
+ K+ + L QA +++ +Q R A + KV + + L
Sbjct: 574 SQ------EKADEMLAKKRKQAEKIINDLEEQRR--AGGQVRTNKVIEAKGALNKL---- 621
Query: 767 TVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVV 826
+ E+ A++ V++ R K+ +VGD V V S+G++G + K + + E V
Sbjct: 622 ---ERENQNLANNKVLQ------REKKRHDVSVGDNVKVLSYGQQGVITK-KLGEHEFEV 671
Query: 827 QVGNMKWIMKFTD 839
Q+G +K +K TD
Sbjct: 672 QIGILK--VKVTD 682
>sp|Q189Q3|MUTS2_CLOD6 MutS2 protein OS=Clostridium difficile (strain 630) GN=mutS2 PE=3
SV=1
Length = 792
Score = 229 bits (584), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 144/392 (36%), Positives = 222/392 (56%), Gaps = 31/392 (7%)
Query: 448 IFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGD 507
I++ R LVITGPNTGGKT+ +KTVGL +M +SGLHI + + + +D+VFADIGD
Sbjct: 322 IYLGRDFHTLVITGPNTGGKTVTIKTVGLFALMTQSGLHIPADYGSSMCVYDNVFADIGD 381
Query: 508 EQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESG 567
EQS+ QSLSTFS H+ I +I+ T+ SLV+ DE+GAGT+P+EG AL +++LE G
Sbjct: 382 EQSIEQSLSTFSSHMTNIVSILQNVTADSLVIFDELGAGTDPVEGAALAIAVLEDINSVG 441
Query: 568 SLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGL 627
+ IATTH+ ELK + ENA +EFD L PTYK+L GVPG+S+A I+ +LGL
Sbjct: 442 A-KCIATTHYSELKNYALTKSGVENAAVEFDIETLSPTYKLLIGVPGKSNAFEISRKLGL 500
Query: 628 PGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRK 687
V+ A++ + + +V+ +E+ + + +E EA L + K + K
Sbjct: 501 SDYVISRAKEYINTENIALEDVLQNVEKNRIKAVEDREEAER---LKEEIEKLKVEYDEK 557
Query: 688 ILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSL 747
LE SQR + ++K A + A S++ ++ +++ + RSL +RA + + + L
Sbjct: 558 -LEKLVSQRDKMIEK---AKSEAFSIIRQAKEEVDIIIKELRSLEQERASKEKNRKIEEL 613
Query: 748 HCTKVGKNQHVLTSNFQ--QTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHV 805
+ LTS+ Q TV + P S+ +KD+K G+ V V
Sbjct: 614 --------RKELTSSMGSLQPTVKSMIVPK-VSNKEIKDLKP------------GEEVKV 652
Query: 806 SSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKF 837
+ + G+V+ V+ ++E VVQ+G MK + F
Sbjct: 653 ITLNQNGSVVSVDKKRKEAVVQIGIMKMTLPF 684
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 77/348 (22%), Positives = 160/348 (45%), Gaps = 30/348 (8%)
Query: 52 ESLRVLEWDKLCHSVSSFARTSLGREATLTQLWSI--NQTYQDSLRLLDETNAAIEMQ-K 108
+SLRVLE++K+ + A +SLG L + ++ N + + +L+ET+ A + K
Sbjct: 4 KSLRVLEYNKIIDLLKKKASSSLG----LKYIENLVPNTDFVEVKSMLEETSEAQSIIIK 59
Query: 109 HGSCSLDLTGVDLSLVKSAIREVRRASPLRPNEALAVVALLQFSETLQLSLRAAIKEDAD 168
GS L+ + ++ ++ + L P + + L+ + L+ SL ++ +ED +
Sbjct: 60 RGSVGLE----GIHDIEDKVKRAYIGASLDPGSLIMIADTLRVARRLRNSLSSSDEEDFN 115
Query: 169 LYIRFMPLTQMIMQ-LFVNRSLIKSIMQVVDEDGSIKDSASPALKQSRGQVQMLERKLYQ 227
P+ Q + L+V + + I + + I D+AS L+ R ++ + +
Sbjct: 116 -----YPIIQSLSNSLYVYKDIEDQIYNAIISEVEISDNASSILRDIRRRIAQKNQSIRS 170
Query: 228 LMDMLIRNENNESLFLE-VSSIHG-RLCIRTGADQLS-FKGLL--LSSSGIGSVIEPLSA 282
++ +I + + + + S+ G R + ++ S G++ SSSG IEP++
Sbjct: 171 KLNSIISSTTYQKYLQDAIISLRGDRFVVPVKSEYRSQVAGIVHDQSSSGATLFIEPMTI 230
Query: 283 VPLNDELQQARASVTKAEEDV---LLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSL 339
V +N+EL+Q + + E + L A+ ++ DL +++L +LD ++ S+
Sbjct: 231 VEMNNELRQLKLGEQEEIERILSELSAMVGEVSEDLISNQEILG---RLDFAFSKGKLSI 287
Query: 340 SFGGTSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLL 387
G P + + + P+ K TIYL + +H L++
Sbjct: 288 QMRGIEPTLNEDKYLNIKNGRHPLLDKKKVVAN--TIYLGRDFHTLVI 333
>sp|Q38YN3|MUTS2_LACSS MutS2 protein OS=Lactobacillus sakei subsp. sakei (strain 23K)
GN=mutS2 PE=3 SV=1
Length = 787
Score = 228 bits (581), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 147/417 (35%), Positives = 224/417 (53%), Gaps = 38/417 (9%)
Query: 431 SEMQVSALELAHP-------VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKS 483
+E V + HP V DI I + +V+TGPNTGGKTI LKT+GL +MA+S
Sbjct: 297 AENHVDLKQARHPLIDATKVVANDIAIGADYQAIVVTGPNTGGKTITLKTLGLVQVMAQS 356
Query: 484 GLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEI 543
GL I + E ++V F +FADIGDEQS+ Q+LSTFS H++ I I+ Q +SLVLLDE+
Sbjct: 357 GLFITAREESQVGVFSDIFADIGDEQSIEQNLSTFSAHMENIIQILKQIDDRSLVLLDEL 416
Query: 544 GAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLK 603
GAGT+P EG AL +++L+ G+ + +A+TH+ ELK Y+ NA MEFD L+
Sbjct: 417 GAGTDPQEGAALAIAILDQIGIVGANV-VASTHYPELKIYGYNRPQTINASMEFDVATLQ 475
Query: 604 PTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEH 663
PTY++L GVPGRS+A +I+ RLGLP +V A+QL S ++N +I ++E +
Sbjct: 476 PTYRLLIGVPGRSNAFDISTRLGLPNSIVDQAKQLMNDESQDLNNMITDLENQRKAAETE 535
Query: 664 VHEARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCP 723
RH L + +LH+ L ++ E ++ + +K A ++V K+ +
Sbjct: 536 YQALRHELTEATDLHQQLSTAYQQFFEDRETEMTKAKEK-------ANAIVEKAEVKADK 588
Query: 724 SASQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVK 783
++ R + + Q++ + Q K E + +K
Sbjct: 589 VITKLRDMQMNQGAQIKEN----------------------QLIDAKAELGQLHQETTLK 626
Query: 784 DIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 840
K R KR + VGD V V+S+G++GT+I+ SK VQ+G +K + D+
Sbjct: 627 KNKVLQRAKRRQTLKVGDDVLVTSYGQRGTLIRQVDSK-NWEVQMGIIKMKIANDDL 682
Score = 54.3 bits (129), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 79/310 (25%), Positives = 141/310 (45%), Gaps = 35/310 (11%)
Query: 54 LRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIEMQKHGSCS 113
L+ LE+DK+ + +A T+ G+E T L IN+ +RL ++T
Sbjct: 6 LKTLEYDKIKQMLQGYAITAFGQEQIAT-LEPINEADLIQIRL-NQTK------------ 51
Query: 114 LDLTGVDLSLVKSAIREVRRASPLRPN-EALAVVALLQFSETLQLS--LRAAIK------ 164
GVD+ +K I + + +RP+ + + + A+L SE Q+ LRA
Sbjct: 52 ---DGVDIERLKGGI-PLPQLENIRPHLKRIEIGAMLNGSELAQIGRVLRATSAVVRFFD 107
Query: 165 --EDADLYIRFMPLTQMIMQLFVNRSLIKSIMQVVDEDGSIKDSASPALKQSRGQVQMLE 222
E +L ++ +P +++ Q L + I V +DG+I D+AS L+ R ++ LE
Sbjct: 108 DLEKDELELKALP--ELVAQFVTLPQLTERIRSSVADDGAILDTASTKLRGLRTGLKQLE 165
Query: 223 RKLYQLMDMLIRNENNESLFLEVSSI-HGRLCIRTGAD-QLSFKGLL--LSSSGIGSVIE 278
++ M + L + +I + R I + + F G++ S+SG +E
Sbjct: 166 GQIRSRMASYTHGAKAKYLSDPIVTIRNDRYVIPVKQEYRGQFGGVVHDQSASGQTLFME 225
Query: 279 PLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYS 338
P + + LN+ L+Q + + E +L L+E + + I + QLD VNA+A +
Sbjct: 226 PQAIMELNNRLRQLQIEEQQEIERILAELSEAIMPERHNILANAELLGQLDFVNAKAQLA 285
Query: 339 LSFGGTSPNI 348
+ T P I
Sbjct: 286 KALKATEPLI 295
>sp|Q8XJ80|MUTS2_CLOPE MutS2 protein OS=Clostridium perfringens (strain 13 / Type A)
GN=mutS2 PE=3 SV=1
Length = 786
Score = 228 bits (580), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 202/698 (28%), Positives = 327/698 (46%), Gaps = 121/698 (17%)
Query: 54 LRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIE-MQKHGSC 112
LRVLE++K+ V +A T +E L L + Y D L+ET A++ + + G+
Sbjct: 6 LRVLEFNKIKELVKGYAITKSAKEMVL-DLKPYDSVY-DVKEHLEETKEALDILMRKGNP 63
Query: 113 SLDLTGVDLSLVKSAIREVRRASPLRPNEALAVVALLQFSETLQLSLRAAIKEDADLYIR 172
+ L VK AI + L++ LL+ L A ++ +D R
Sbjct: 64 PFE----GLYDVKEAITRAEKGG------VLSIEGLLRIGNML-----AVTRKLSDFLAR 108
Query: 173 FMP------LTQMIMQLFVNRSLIKSIMQVVDEDGSIKDSASPALKQSRGQVQMLERKLY 226
L M L V R + +I + + + I DSAS L R ++ +
Sbjct: 109 KEEEEEHRILEGMREGLIVLRGVESAISKAIVSEDEIADSASDKLYSIRRSLKEKNSSIR 168
Query: 227 QLMDMLIRNENNESLFLEVSSIHG-RLCIRTGADQLS-FKGLL--LSSSGIGSVIEPLSA 282
++ ++R+ N + L + ++ G R I A+ S GL+ SS+G IEP +
Sbjct: 169 DKVNSIVRS-NTQYLQDSLYTVRGDRYVIPVKAEYKSQVPGLVHDQSSTGATLFIEPTAL 227
Query: 283 VPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFG 342
V LN+E+++ E +L L+ + ++D I+ N I++LD + A+A Y G
Sbjct: 228 VNLNNEIKELMLKERAEIERILAELSVLVYKNIDVIKVNFNIIVELDFIFAKAKYGSDLG 287
Query: 343 GTSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKTQQAWKDLE 402
GT P + E I L A HPL+
Sbjct: 288 GTLPIV----------------------NEEGVIDLMDARHPLI---------------- 309
Query: 403 SANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGP 462
P + VS+ DI++ R+ L+ITGP
Sbjct: 310 ---------------------------PKDKVVSS---------DIYLGREFSTLLITGP 333
Query: 463 NTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHL 522
NTGGKT+ LKT GL +M SGL I +SE + + +F+ +FADIGDEQS+ QSLSTFS H+
Sbjct: 334 NTGGKTVTLKTTGLIELMGLSGLLIPASENSSISFFEEIFADIGDEQSIEQSLSTFSSHM 393
Query: 523 KQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKT 582
I I+ ++ ++S VL DE+GAGT+P EG AL +S+LE G + ++TTH+ ELK
Sbjct: 394 TNIVRIMEKANNKSFVLFDELGAGTDPTEGAALAISILENLRARGCRI-MSTTHYSELKG 452
Query: 583 LKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAA 642
+ ENA +EF+ L+PTY++L GVPG+S+A I+ RLGL V++ A+++
Sbjct: 453 YALKTENVENASVEFNVETLRPTYRLLIGVPGKSNAFEISRRLGLKDNVIEEAKKVISTE 512
Query: 643 SAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQK 702
S + ++I + + + ++ ++AR +L + K + R K ++F +++
Sbjct: 513 SLQFEDLI---QSLQEKSIKAENDAREAAILRNDAEK--YKNRYK-------EKFERIES 560
Query: 703 ISD-AAAIARSLVHKSAQQLCPSASQARSLVHKRAQQL 739
+ D A AR + A+Q+ SA + + K + L
Sbjct: 561 VRDNVYADAR----REAKQILDSAKEEADAILKNMRDL 594
>sp|A5D0W6|MUTS2_PELTS MutS2 protein OS=Pelotomaculum thermopropionicum (strain DSM 13744
/ JCM 10971 / SI) GN=mutS2 PE=3 SV=1
Length = 785
Score = 227 bits (579), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 149/390 (38%), Positives = 215/390 (55%), Gaps = 30/390 (7%)
Query: 444 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 503
VPIDI + LVITGPNTGGKT+ LKT GL V+MA+SGLHI + E +++ F VFA
Sbjct: 314 VPIDIRLGADFDTLVITGPNTGGKTVALKTAGLLVLMAQSGLHIPAGEGSRLGIFRQVFA 373
Query: 504 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 563
DIGDEQS+ QSLSTFS H+ I II ++ SLVLLDE+GAGT+P EG AL S+LE
Sbjct: 374 DIGDEQSIEQSLSTFSSHMNNIVEIIGKAGPDSLVLLDELGAGTDPAEGAALAQSILEKL 433
Query: 564 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 623
+G+ T+ATTH+GELK + + ENA +EFD + L+PTY++L G PGRS+A IA
Sbjct: 434 HSAGA-KTVATTHYGELKDFALTRERVENASVEFDAITLRPTYRLLIGKPGRSNAFEIAA 492
Query: 624 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLR 683
RLGLP VV+ AR A + E++ +E+ + + A +R L +
Sbjct: 493 RLGLPEEVVKRARSFLTAEHIQAEELMRSLEKTQQEAEAERRRAAELASEARALKERY-- 550
Query: 684 TRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSA 743
KI AS+R +S AA A++LV + + + + R + + A + R +A
Sbjct: 551 --EKIEADLASKR---ESILSKAAEEAQALVRAARLEAEAAVRELREKMAEEAARERENA 605
Query: 744 SQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLV 803
+ K+ K Q + + TV P A + + G+ V
Sbjct: 606 IREAR-EKLRKLQQRVGRAVPEKTV-----PGEAPAGL----------------RPGEEV 643
Query: 804 HVSSFGKKGTVIKVEPSKEEIVVQVGNMKW 833
++ + +KG V++ + E++VQVG +K
Sbjct: 644 FLTRYNQKGYVLEPPGAGGEVLVQVGVIKM 673
Score = 53.9 bits (128), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 70/307 (22%), Positives = 135/307 (43%), Gaps = 33/307 (10%)
Query: 53 SLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIEMQKHGSC 112
+L+ LE+ K+ +++ + +SLGRE + ++ LD A + Q+ S
Sbjct: 5 ALKRLEYHKVLEQLAACSGSSLGREKIM------------AMEPLDNLQAILRKQEETSE 52
Query: 113 SLDLTGVD-------LSLVKSAIREVRRASPLRPNEALAVVALLQFSETLQLSLRAAIKE 165
L ++ +++ +R+ + + L P E LAV L T+ R ++
Sbjct: 53 GRKLLRLEPFAEAGGWKDIRAQLRKAGQGAILDPEELLAVADTLTAGRTI----RKFFQD 108
Query: 166 DADLYIRFMPLTQMIMQLFVN-RSLIKSIMQVVDEDGSIKDSASPALKQSRGQVQMLERK 224
+ Y PL + V+ L + I + G + D ASP L Q R ++ + +
Sbjct: 109 RQEQY----PLLYEVSSALVSLPELERKIKNAILPGGEVADGASPELAQIRRRLAAAQAQ 164
Query: 225 LYQLMDMLIRNENNESLFLE--VSSIHGRLCIRTGADQLS-FKGLL--LSSSGIGSVIEP 279
+ + ++ +IR+ + + E V+ GR + + S G++ S+SG IEP
Sbjct: 165 VKEHLEHIIRSPSYQKYLQEPIVTIREGRYVVPVKIEHRSQVPGIVHDQSASGATLFIEP 224
Query: 280 LSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSL 339
++ V N+EL++ A+ + + +L L+ + I L + +LD + ARA YS
Sbjct: 225 MAVVEKNNELRRLMAAEKREIQRILAELSAGVAQHAGPIGASLEALGELDFIMARARYSQ 284
Query: 340 SFGGTSP 346
+P
Sbjct: 285 KLDAWAP 291
>sp|Q0TP77|MUTS2_CLOP1 MutS2 protein OS=Clostridium perfringens (strain ATCC 13124 / NCTC
8237 / Type A) GN=mutS2 PE=3 SV=1
Length = 786
Score = 227 bits (579), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 200/698 (28%), Positives = 326/698 (46%), Gaps = 121/698 (17%)
Query: 54 LRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIE-MQKHGSC 112
LRVLE++K+ V +A T +E L L + Y D L+ET A++ + + G+
Sbjct: 6 LRVLEFNKIKELVKGYAITKSAKEMVL-DLKPYDSVY-DVKEHLEETKEALDILMRKGNP 63
Query: 113 SLDLTGVDLSLVKSAIREVRRASPLRPNEALAVVALLQFSETLQLSLRAAIKEDADLYIR 172
+ L VK AI + L++ LL+ L ++ + + D R
Sbjct: 64 PFE----GLYDVKEAITRAEKGG------VLSIEGLLRIGNMLSVTRKLS-----DFLAR 108
Query: 173 FMP------LTQMIMQLFVNRSLIKSIMQVVDEDGSIKDSASPALKQSRGQVQMLERKLY 226
L M L V R + +I + + + I DSAS L R ++ +
Sbjct: 109 KEEEEEHRILEGMREGLIVLRGVESAISKAIVSEDEIADSASDKLYSIRRSLKEKNSSIR 168
Query: 227 QLMDMLIRNENNESLFLEVSSIHG-RLCIRTGADQLS-FKGLLLSSSGIGSV--IEPLSA 282
++ ++R+ N + L + ++ G R I A+ S GL+ S G+ IEP +
Sbjct: 169 DKVNSIVRS-NAQYLQDSLYTVRGDRYVIPVKAEYKSQVPGLVHDQSSTGATLFIEPTAL 227
Query: 283 VPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFG 342
V LN+E+++ E +L L+ + ++D I+ N I++LD + A+A Y G
Sbjct: 228 VNLNNEIKELMLKERAEIERILAELSALVYKNIDVIKVNFNIIVELDFIFAKAKYGSDLG 287
Query: 343 GTSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKTQQAWKDLE 402
GT P + E I L A HPL+
Sbjct: 288 GTMPIV----------------------NEEGVIDLMDARHPLI---------------- 309
Query: 403 SANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGP 462
P + VS+ DI++ R+ L+ITGP
Sbjct: 310 ---------------------------PKDKVVSS---------DIYLGREFSTLLITGP 333
Query: 463 NTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHL 522
NTGGKT+ LKT GL +M SGL I +SE + + +F+ +FADIGDEQS+ QSLSTFS H+
Sbjct: 334 NTGGKTVTLKTTGLIELMGLSGLLIPASENSSISFFEEIFADIGDEQSIEQSLSTFSSHM 393
Query: 523 KQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKT 582
I I+ ++ ++S VL DE+GAGT+P EG AL +S+LE G + ++TTH+ ELK
Sbjct: 394 TNIVKIMEKANNKSFVLFDELGAGTDPTEGAALAISILENLRARGCRI-MSTTHYSELKG 452
Query: 583 LKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAA 642
+ ENA +EF+ L+PTY++L GVPG+S+A I+ RLGL V++ A+++
Sbjct: 453 YALKTENVENASVEFNVETLRPTYRLLIGVPGKSNAFEISRRLGLKDNVIEEAKKVISTE 512
Query: 643 SAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQK 702
S + ++I + + + ++ ++AR +L + K + R K ++F +++
Sbjct: 513 SLQFEDLI---QSLQEKSIKAENDAREAAILRNDAEK--YKNRYK-------EKFERIES 560
Query: 703 ISD-AAAIARSLVHKSAQQLCPSASQARSLVHKRAQQL 739
+ D A AR + A+Q+ SA + + K + L
Sbjct: 561 VRDNVYADAR----REAKQILDSAKEEADAILKNMRDL 594
>sp|Q0SRU6|MUTS2_CLOPS MutS2 protein OS=Clostridium perfringens (strain SM101 / Type A)
GN=mutS2 PE=3 SV=1
Length = 786
Score = 227 bits (578), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 199/698 (28%), Positives = 326/698 (46%), Gaps = 121/698 (17%)
Query: 54 LRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIE-MQKHGSC 112
LRVLE++K+ V +A T +E L L + Y D L+ET A++ + + G+
Sbjct: 6 LRVLEFNKIKELVKGYAITKSAKEMVL-DLKPYDSVY-DVKEHLEETKEALDILMRKGNP 63
Query: 113 SLDLTGVDLSLVKSAIREVRRASPLRPNEALAVVALLQFSETLQLSLRAAIKEDADLYIR 172
+ L VK AI + L++ LL+ L ++ + + D R
Sbjct: 64 PFE----GLYDVKEAITRAEKGG------VLSIEGLLRIGNMLSVTRKLS-----DFLAR 108
Query: 173 FMP------LTQMIMQLFVNRSLIKSIMQVVDEDGSIKDSASPALKQSRGQVQMLERKLY 226
L M L V R + +I + + + I DSAS L R ++ +
Sbjct: 109 KEEEEEHRILEGMREGLIVLRGVESAISKAIVSEDEIADSASDKLYSIRRSLKEKNSSIR 168
Query: 227 QLMDMLIRNENNESLFLEVSSIHG-RLCIRTGADQLS-FKGLLLSSSGIGSV--IEPLSA 282
++ ++R+ N + L + ++ G R I A+ S GL+ S G+ IEP +
Sbjct: 169 DKVNSIVRS-NAQYLQDSLYTVRGDRYVIPVKAEYKSQVPGLVHDQSSTGATLFIEPTAL 227
Query: 283 VPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFG 342
V LN+E+++ E +L L+ + ++D I+ N I++LD + A+A Y G
Sbjct: 228 VNLNNEIKELMLKERAEIERILAELSALVYKNIDVIKVNFNIIVELDFIFAKAKYGSDLG 287
Query: 343 GTSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKTQQAWKDLE 402
GT P + E I L A HPL+
Sbjct: 288 GTMPIV----------------------NEEGVIDLMDARHPLI---------------- 309
Query: 403 SANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGP 462
P + VS+ DI++ R+ L+ITGP
Sbjct: 310 ---------------------------PKDKVVSS---------DIYLGREFSTLLITGP 333
Query: 463 NTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHL 522
NTGGKT+ LKT GL +M SGL I +SE + + +F+ +FADIGDEQS+ QSLSTFS H+
Sbjct: 334 NTGGKTVTLKTTGLIELMGLSGLLIPASENSSISFFEEIFADIGDEQSIEQSLSTFSSHM 393
Query: 523 KQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKT 582
I I+ ++ ++S VL DE+GAGT+P EG AL +S+LE G + ++TTH+ ELK
Sbjct: 394 TNIVKIMEKANNKSFVLFDELGAGTDPTEGAALAISILENLRARGCRI-MSTTHYSELKG 452
Query: 583 LKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAA 642
+ ENA +EF+ L+PTY++L GVPG+S+A I+ RLGL +++ A+++
Sbjct: 453 YALKTENVENASVEFNVETLRPTYRLLIGVPGKSNAFEISRRLGLKDNIIEEAKKVISTE 512
Query: 643 SAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQK 702
S + ++I + + + ++ ++AR +L + K + R K ++F +++
Sbjct: 513 SLQFEDLI---QSLQEKSIKAENDAREAAILRNDAEK--YKNRYK-------EKFERIES 560
Query: 703 ISD-AAAIARSLVHKSAQQLCPSASQARSLVHKRAQQL 739
+ D A AR + A+Q+ SA + + K + L
Sbjct: 561 VRDNVYADAR----REAKQILDSAKEEADTILKNMRDL 594
>sp|B9KYW4|MUTS2_THERP MutS2 protein OS=Thermomicrobium roseum (strain ATCC 27502 / DSM
5159 / P-2) GN=mutS2 PE=3 SV=1
Length = 792
Score = 224 bits (572), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 183/615 (29%), Positives = 294/615 (47%), Gaps = 92/615 (14%)
Query: 52 ESLRVLEWDKL-------C-HSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAA 103
E LR+LE+DK+ C +SV+S + A Q+ + + +++ RLL+E
Sbjct: 4 ELLRLLEFDKIRELLAARCQYSVASERAREIAPTADRDQVAYLLRVTREAARLLNE---- 59
Query: 104 IEMQKHGSCSLDLTGVDLSLVKSAIREVRRASPLRPNEALAVVALLQFSETLQLSLRAAI 163
S + G ++S ++ +R + L P + V+ L+ + SLR
Sbjct: 60 -------RPSFTIGG--FRDIRSVVQAAQRGNILAPADVRTVLDTLEAAA----SLRRQF 106
Query: 164 KEDADLYIRFMPLTQMIMQLFVNRSLIKSIMQVVDEDGSIKDSASPALKQSRGQVQMLER 223
D R+ L + ++ + L + + + G + D+ASP L R ++
Sbjct: 107 MADERWSERYPALAEFVLAMVDLPGLRADLARSIGPRGEVLDTASPELAAIRRSLKEAHE 166
Query: 224 KLYQLMDMLIRNENNESLFLEVSSIHGRLCIRTGADQL-SFKGLLLSSSGIGSV--IEPL 280
+L + + L+ V+ GR I AD+ + G+ SG G +EP
Sbjct: 167 RLLERLRRLLAERQEAIQDAYVTIRDGRYVIPVRADRRQAVPGITHDVSGSGQTLFVEPF 226
Query: 281 SAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLS 340
+ LN+ ++ +A+ T+ E +L LT+++ DE+ +++ LD+ A+A +
Sbjct: 227 EVLELNNRWRELQAAETREIERILRVLTQRIADAADELLQIVEAGAALDLALAKARLAYD 286
Query: 341 FGGTSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKTQQAWKD 400
P + EP V + L A HPLL ++T
Sbjct: 287 LDAVEPELL-----------EPSGPTVPEGHPFLRVRLRAARHPLL----DRRT------ 325
Query: 401 LESANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVIT 460
A P+ ++ + + R+LVIT
Sbjct: 326 ----------------------------------------AVPIDVE--LGERFRILVIT 343
Query: 461 GPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSG 520
GPNTGGKT+ LKTVGL +MA++GL I ++ + + F ++F DIGDEQS+ Q+LSTFS
Sbjct: 344 GPNTGGKTVALKTVGLLALMAQAGLFIPAAPGSGLSVFPAIFVDIGDEQSIEQNLSTFSS 403
Query: 521 HLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGEL 580
H+++I + Q+ + SLVLLDEI AGT+P EG AL ++LE E G+ L I TTH+ EL
Sbjct: 404 HMRRIVATLQQADASSLVLLDEIAAGTDPQEGAALARAILERLLEIGA-LGIVTTHYPEL 462
Query: 581 KTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYG 640
K ENA +EFD V L PTY++L G+PGRS A+ +A RLGLP V+ AR+L G
Sbjct: 463 KVFATGTPGLENASVEFDPVTLSPTYRLLVGLPGRSHALEVARRLGLPEDVIARARELLG 522
Query: 641 AASAEINEVIIEMER 655
+ + +++ +I EM+R
Sbjct: 523 SGAPQLDRLIAEMQR 537
>sp|Q65GE2|MUTS2_BACLD MutS2 protein OS=Bacillus licheniformis (strain DSM 13 / ATCC
14580) GN=mutS2 PE=3 SV=1
Length = 785
Score = 224 bits (572), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 150/403 (37%), Positives = 217/403 (53%), Gaps = 33/403 (8%)
Query: 438 LELAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPW 497
L L VP DI + + +VITGPNTGGKT+ LKT+GL MMA+SGLH+ + E ++
Sbjct: 312 LPLDEVVPNDIELGGEYTTIVITGPNTGGKTVTLKTLGLLTMMAQSGLHVPAEEGSETAV 371
Query: 498 FDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGM 557
FD VFADIGDEQS+ QSLSTFS H+ I +I+ T SLVL DE+GAGT+P EG AL +
Sbjct: 372 FDQVFADIGDEQSIEQSLSTFSSHMVNIVDILKDMTENSLVLFDELGAGTDPQEGAALAI 431
Query: 558 SLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSS 617
S+L+ ++G+ + IATTH+ ELK Y+ + NA +EFD L PTYK+L GVPGRS+
Sbjct: 432 SILDEVCQTGARV-IATTHYPELKAYGYNRENVINASVEFDIDTLSPTYKLLIGVPGRSN 490
Query: 618 AINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNL 677
A I++RLGLP ++ A+ A E++ +I +E K + + E + L
Sbjct: 491 AFEISKRLGLPDYLIGRAKAEMTAEHNEVDTMIASLEDSKKRAEAELKETEAIRAEAEAL 550
Query: 678 HKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQ 737
H++ L+ S+ K K+ + A K+A+++ + +A ++
Sbjct: 551 HRD--------LQQQISEWQEKKDKLYEEAE------QKAAEKVKAAMKEADDII----- 591
Query: 738 QLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELP 797
QSL K H + + K A S K Q KR P
Sbjct: 592 -------QSLRMI---KEDHKAFKDHELIEAKKRLEEAVPSFEKAKKPAQKKTDKRELKP 641
Query: 798 NVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 840
GD V V +FG+KGT+++ + E VQ+G +K +K D+
Sbjct: 642 --GDEVKVLTFGQKGTLLE-KTGAAEWNVQIGILKMKVKEKDL 681
Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 126/264 (47%), Gaps = 16/264 (6%)
Query: 53 SLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETN-AAIEMQKHGS 111
+L LE+ K+ ++ A +SLG+E L +++ ++ +L +E + A ++ GS
Sbjct: 5 ALSALEFHKVKEQLTEHAASSLGKEMLLE--LKPSRSLEEVKKLQEEVDEAGTVLRLKGS 62
Query: 112 CSLDLTGVDLSLVKSAIREVRRASPLRPNEALAVVALLQFSETLQLSLRAAIKEDADLYI 171
L+ ++ A+R S L P E + LL ++ ++ L ++ ++
Sbjct: 63 APFG----GLTDIRKALRRAEIGSILSPAELTEISGLLYAAKQMKHFLEGLFEDGVEIPY 118
Query: 172 RFMPLTQMIMQLFVNRSLIKSIMQVVDEDGSIKDSASPALKQSRGQVQMLERKLYQLMDM 231
L Q +L L + I +D+ G + D AS L+ R Q++ LE ++ ++
Sbjct: 119 ----LHQYAEKLIPLSELERDINSCIDDHGEVLDHASETLRGIRTQLRTLESRIRDRLES 174
Query: 232 LIRNENNESLFLE--VSSIHGRLCIRTGADQLSFKGLLL---SSSGIGSVIEPLSAVPLN 286
++R+ + + + + ++ + R I + S G ++ SSSG IEP + V +N
Sbjct: 175 MLRSSSAQKMLSDTIITIRNDRFVIPVKQEYRSSYGGIVHDQSSSGATLFIEPQAIVDMN 234
Query: 287 DELQQARASVTKAEEDVLLALTEK 310
+ L+QA+ + + E +L LTEK
Sbjct: 235 NALRQAKVNEKQEIERILRVLTEK 258
>sp|B4U143|MUTS2_STREM MutS2 protein OS=Streptococcus equi subsp. zooepidemicus (strain
MGCS10565) GN=mutS2 PE=3 SV=1
Length = 778
Score = 223 bits (569), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 150/400 (37%), Positives = 232/400 (58%), Gaps = 43/400 (10%)
Query: 440 LAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFD 499
+ +PV D+ A V+VITGPNTGGKTI LKT+GLA +MA+SGL IL+ + ++V F+
Sbjct: 307 IQNPVANDLHFANDLAVIVITGPNTGGKTIMLKTLGLAQVMAQSGLPILADKGSRVAVFN 366
Query: 500 SVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSL 559
++ADIGDEQS+ QSLSTFS H+ I I+ Q+ S SL+L DE+GAGT+P EG +L M++
Sbjct: 367 GIYADIGDEQSIEQSLSTFSSHMTHIVEILKQADSDSLILFDELGAGTDPQEGASLAMAI 426
Query: 560 LEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAI 619
LE + ++ T+ATTH+ ELK + ENA M FD V LKPTY+ + GVPGRS+A
Sbjct: 427 LEQLRLT-NIKTMATTHYPELKAYGIETAYVENASMAFDNVSLKPTYRFMQGVPGRSNAF 485
Query: 620 NIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQF---LEHVHEARHFLMLSRN 676
+IA RLGL +V+ A Q A + ++N +I ++E+ + LEH+ E N
Sbjct: 486 DIARRLGLAEHIVKEA-QAMTATNHDVNRIIEQLEQQTLESRKRLEHIKEVEQ-----DN 539
Query: 677 LHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRA 736
L N R +K+ + + ++++K AA AR +V + L S S S +H++A
Sbjct: 540 LKFN--RAVKKLYNEFSHAKDKELEK---AALEAREIVDMA---LAESES-ILSQLHEKA 590
Query: 737 QQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTEL 796
+ L+P ++ + +H L V + + + V+K + K+
Sbjct: 591 E-LKPH--------EIIEAKHRLKQ--------LVPEQSLSQNKVLK------KAKKWRA 627
Query: 797 PNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMK 836
P VGD + V+++G++GT++ + + QVG +K +K
Sbjct: 628 PRVGDDIIVTAYGQRGTLL-AQLKDKRWEAQVGLIKLTLK 666
Score = 33.9 bits (76), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 98/202 (48%), Gaps = 12/202 (5%)
Query: 143 LAVVALLQFSETLQLSLRAAIKEDADL-YIRFMPLTQMIMQLFVNRSLIKSIMQVVDEDG 201
L++ LL+ + LQ+S A + ADL + + L + ++ SL S +Q +++ G
Sbjct: 84 LSIQELLEVKKLLQVSAEAC-RFYADLENVDLVALKALFEKIESFPSLQGS-LQAINDAG 141
Query: 202 SIKDSASPALKQSRGQVQMLERKLYQLMDMLIRNEN---NESLFLEVSSIHGRLCIRT-G 257
++ ASP L+ R Q+ E QL+ +++ + +ESL ++S +GR +
Sbjct: 142 FVEGFASPELESIRRQISNKEHASRQLLQDILKKQAAYLSESL---IASRNGRSVLPVKN 198
Query: 258 ADQLSFKGLL--LSSSGIGSVIEPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDL 315
+ G++ +S+SG IEP + V LN+EL Q + +L L+E+++
Sbjct: 199 TYRHKVAGVVHDMSASGSTVYIEPRALVSLNEELTQLQTDERHEIGRILHELSEQLRPHS 258
Query: 316 DEIEKMLNGIIQLDVVNARATY 337
+ + LD+V A+ Y
Sbjct: 259 RSLRNNAWLLGHLDLVRAKYLY 280
>sp|C0MEM8|MUTS2_STRS7 MutS2 protein OS=Streptococcus equi subsp. zooepidemicus (strain
H70) GN=mutS2 PE=3 SV=1
Length = 778
Score = 223 bits (568), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 150/401 (37%), Positives = 230/401 (57%), Gaps = 45/401 (11%)
Query: 440 LAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFD 499
+ +PV D+ A V+VITGPNTGGKTI LKT+GLA +MA+SGL IL+ + ++V F+
Sbjct: 307 IQNPVANDLHFANDLAVIVITGPNTGGKTIMLKTLGLAQVMAQSGLPILADKGSRVAVFN 366
Query: 500 SVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSL 559
++ADIGDEQS+ QSLSTFS H+ I I++Q+ S SL+L DE+GAGT+P EG +L M++
Sbjct: 367 GIYADIGDEQSIEQSLSTFSSHMTHIVEILNQADSDSLILFDELGAGTDPQEGASLAMAI 426
Query: 560 LEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAI 619
LE + ++ T+ATTH+ ELK + ENA M FD V LKPTY+ + GVPGRS+A
Sbjct: 427 LEQLRLT-NIKTMATTHYPELKAYGIETAYVENASMAFDNVSLKPTYRFMQGVPGRSNAF 485
Query: 620 NIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQF---LEHVHEARHFLMLSRN 676
+IA RLGL +V+ A Q A ++N +I ++E+ + LEH+ E N
Sbjct: 486 DIARRLGLAEHIVKEA-QAMTATDHDVNRIIEQLEQQTLESRKRLEHIKEVEQ-----DN 539
Query: 677 LHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRA 736
L N R +K+ + + ++++K AA AR +V + + SQ +H++A
Sbjct: 540 LKFN--RAVKKLYNEFSHAKDKELEK---AALEAREIVDIALAESDSILSQ----LHEKA 590
Query: 737 QQLRP-SASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTE 795
+ L+P ++ H K + L+ N K +KQ+ K+
Sbjct: 591 E-LKPHEIIEAKHRLKQLAPEQSLSQN--------------------KVLKQA---KKWR 626
Query: 796 LPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMK 836
P VGD + V+++G++GT++ + + QVG +K +K
Sbjct: 627 APRVGDDIIVTAYGQRGTLL-AQLKDKRWEAQVGLIKLTLK 666
Score = 37.0 bits (84), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 78/161 (48%), Gaps = 9/161 (5%)
Query: 194 MQVVDEDGSIKDSASPALKQSRGQVQMLERKLYQLMDMLIRNEN---NESLFLEVSSIHG 250
+Q +++ G ++ ASP L+ R Q+ E QL+ +++ + +ESL ++S +G
Sbjct: 134 LQAINDAGFVEGFASPELESIRRQISNKEHASRQLLQDILKKQAAYLSESL---IASRNG 190
Query: 251 RLCIRT-GADQLSFKGLL--LSSSGIGSVIEPLSAVPLNDELQQARASVTKAEEDVLLAL 307
R + + G++ +S+SG IEP + V LN+EL Q +A +L L
Sbjct: 191 RSVLPVKNTYRHKVAGVVHDMSASGSTVYIEPRALVSLNEELTQLQADERHEIGRILHEL 250
Query: 308 TEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNI 348
+E+++ + + LD+V A+ Y + T P I
Sbjct: 251 SEQLRPHSRSLRNNAWLLGHLDLVRAKYLYMQAKQATVPVI 291
>sp|A8AUW9|MUTS2_STRGC MutS2 protein OS=Streptococcus gordonii (strain Challis / ATCC
35105 / CH1 / DL1 / V288) GN=mutS2 PE=3 SV=1
Length = 777
Score = 223 bits (568), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 148/388 (38%), Positives = 218/388 (56%), Gaps = 40/388 (10%)
Query: 435 VSALELAHP-----VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILS 489
+ L++ HP V D+ +VITGPNTGGKTI LKT+GLA +MA+SGL IL+
Sbjct: 297 IQLLQVRHPLIQNAVANDLHFGPDLTEIVITGPNTGGKTIMLKTLGLAQIMAQSGLPILA 356
Query: 490 SEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNP 549
+ ++V F +FADIGDEQS+ QSLSTFS H+ I +I+ Q S+SLVLLDE+GAGT+P
Sbjct: 357 DKGSRVGIFSQIFADIGDEQSIEQSLSTFSSHMTNIVSILEQVDSESLVLLDELGAGTDP 416
Query: 550 LEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKIL 609
EG AL +++LE + T+ATTH+ ELK D+ ENA MEFD L+PTY+ +
Sbjct: 417 QEGAALAIAILEDL-RLRQIKTMATTHYPELKAYGIETDWVENASMEFDTDSLRPTYRFM 475
Query: 610 WGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARH 669
GVPGRS+A IA RLGL ++V +A++ S ++N++I ER + Q L E+R
Sbjct: 476 QGVPGRSNAFEIARRLGLSEVIVSHAQEQTNTDS-DVNQII---ERLEEQTL----ESRK 527
Query: 670 FLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQAR 729
L R + + L+ R + + K +++ A A+ +V L S S+
Sbjct: 528 RLDNIREVEQENLKFNRALKKLYNEFNREKETELNKARLEAQEIV-----DLALSESE-- 580
Query: 730 SLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSP 789
S ++LH K ++ + Q + P T S K +KQ+
Sbjct: 581 ------------SILKNLHAKSSLKPHEIIEAKAQLKKL----APETVDLSKNKVLKQA- 623
Query: 790 RVKRTELPNVGDLVHVSSFGKKGTVIKV 817
K+ P VGD + V+S+G++GT++K+
Sbjct: 624 --KKNRAPKVGDDILVTSYGQRGTLVKL 649
Score = 35.8 bits (81), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 83/181 (45%), Gaps = 4/181 (2%)
Query: 171 IRFMPLTQMIMQLFVNRSLIKSIMQVVDEDGSIKDSASPALKQSRGQVQMLERKLYQLMD 230
+R L + I + V+ I+ + V++ G I+ AS L + R ++Q E K+ L+
Sbjct: 112 VRLQELNR-IFENLVDFPAIQGSLLAVNDGGFIESFASEELGRIRRKIQENESKVRDLLQ 170
Query: 231 MLIRNENNESLFLEVSSIHGRLCI---RTGADQLSFKGLLLSSSGIGSVIEPLSAVPLND 287
+++N+ + V+S +GR + T +++ +S+SG IEP + V LN+
Sbjct: 171 EILKNKGDMLADQVVASRNGRNVLPVKNTYRNRIPGVVHDISASGTTIYIEPRAVVNLNE 230
Query: 288 ELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPN 347
E+ +A +L L+ ++ EI I LD+V A+ + G P
Sbjct: 231 EISNYKADERYELLRILQELSAMIRPHAAEIANNAWIIGHLDLVMAKLAFMRERGAVVPA 290
Query: 348 I 348
I
Sbjct: 291 I 291
>sp|Q03ES2|MUTS2_PEDPA MutS2 protein OS=Pediococcus pentosaceus (strain ATCC 25745 /
183-1w) GN=mutS2 PE=3 SV=1
Length = 785
Score = 222 bits (566), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 191/642 (29%), Positives = 301/642 (46%), Gaps = 104/642 (16%)
Query: 54 LRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIEMQKHGSCS 113
L VLE+DK+ S+ F T G + LR L ++ E++ +
Sbjct: 6 LDVLEYDKIKQSIRQFIATENGTK---------------ELRELVPSSDETEVRNALKQT 50
Query: 114 LDLTGVDLSLVKSAIREVRRASPLRPNEALAVVALLQFSETLQL-----SLRAAIKEDAD 168
LD V++ +K+ I R + L + A L E Q+ + R I D
Sbjct: 51 LD--AVNIYRLKNGIPVPRLEDVTEALQRLKIDAALNGQELAQIGRILRATRTVINFFDD 108
Query: 169 LY---IRFMPLTQMIMQLFVNRSLIKSIMQVVDEDGSIKDSASPALKQSRGQVQMLERKL 225
L I + L Q+I QL + + + ++ +G + +SAS L++ R + +E +
Sbjct: 109 LENEEIEIIALDQVIEQLVTIPEVEERLSNSIEGNGHLLNSASSELRRIRASITRIESDV 168
Query: 226 YQLMDMLIRNENNESLFLEVSSIHG-RLCIRTGADQLS-FKGLL--LSSSGIGSVIEPLS 281
M+ R N + L + +I R I + S F G++ SSSG +EP S
Sbjct: 169 RSRMEKFTRGNNVKYLSEPIVTIRNERYVIPARVEYRSKFGGVVHDQSSSGQTLYVEPES 228
Query: 282 AVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSF 341
V LN+EL+Q + + E+ +L L+ + D ++ + LD++NA+A Y+
Sbjct: 229 VVDLNNELRQNQVAEVHEEQRILQELSALVAPYTDTLKDNSRILGHLDLLNAKAQYAHQL 288
Query: 342 GGTSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKTQQAWKDL 401
T P I S ++E I L +A HPL+ Q
Sbjct: 289 KATEPQI--------SASNE--------------INLREARHPLIDQ------------- 313
Query: 402 ESANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITG 461
+K+ + GE +T LVITG
Sbjct: 314 ---------KKVVSNDIRLGGEYET------------------------------LVITG 334
Query: 462 PNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGH 521
PNTGGKTI LKTVGL +MA+SG+ I ++E + V F+ +FADIGDEQS+ Q+LSTFS H
Sbjct: 335 PNTGGKTITLKTVGLLQLMAQSGMFIPANENSTVRIFEEIFADIGDEQSIEQNLSTFSSH 394
Query: 522 LKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELK 581
+ I+ +SL L DE+GAGT+P EG AL +++L+ +G+ +++ TTH+ ELK
Sbjct: 395 MDNTIRILGNLNERSLALFDELGAGTDPKEGAALAIAILDKVRSTGA-VSMTTTHYPELK 453
Query: 582 TLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGA 641
T Y NA MEFD L+PTYK+L G+PG+S+A I++RLGL ++ AR L
Sbjct: 454 TYGYERMGTINASMEFDVDTLQPTYKLLLGIPGQSNAFEISKRLGLDSDIISQARGLVDQ 513
Query: 642 ASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLR 683
S ++N +I ++ + + + +A L + H+ L++
Sbjct: 514 DSQDLNNMIKDLTTRQKRAQKINQQAVELLKQAEEYHQTLVK 555
>sp|C0MAV6|MUTS2_STRE4 MutS2 protein OS=Streptococcus equi subsp. equi (strain 4047)
GN=mutS2 PE=3 SV=1
Length = 778
Score = 222 bits (566), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 149/401 (37%), Positives = 229/401 (57%), Gaps = 45/401 (11%)
Query: 440 LAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFD 499
+ +PV D+ A V+VITGPNTGGKTI LKT+GLA +MA+SGL IL+ + ++V F+
Sbjct: 307 IQNPVANDLHFANDLAVIVITGPNTGGKTIMLKTLGLAQVMAQSGLPILADKGSRVAVFN 366
Query: 500 SVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSL 559
++ADIGDEQS+ QSLSTFS H+ I I++Q+ S SL+L DE+GAGT+P EG +L M++
Sbjct: 367 GIYADIGDEQSIEQSLSTFSSHMTHIVEILNQADSDSLILFDELGAGTDPQEGASLAMAI 426
Query: 560 LEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAI 619
LE + ++ T+ATTH+ ELK + ENA M FD V LKPTY+ + GVPGRS+A
Sbjct: 427 LEQLRLT-NIKTMATTHYPELKAYGIETAYVENASMAFDNVSLKPTYRFMQGVPGRSNAF 485
Query: 620 NIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQF---LEHVHEARHFLMLSRN 676
+IA RLGL +V+ A Q A ++N +I ++E+ + LEH+ E N
Sbjct: 486 DIARRLGLAEHIVKEA-QAMTATDHDVNRIIEQLEQQTLESRKRLEHIKEVEQ-----DN 539
Query: 677 LHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRA 736
L N R +K+ + + ++++K AA AR +V + + SQ +H++A
Sbjct: 540 LKFN--RAVKKLYNEFSHAKDKELEK---AALEAREIVDIALAESDSILSQ----LHEKA 590
Query: 737 QQLRP-SASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTE 795
+ L+P ++ H K + L+ N V+K + K+
Sbjct: 591 E-LKPHEIIEAKHRLKQLAPEQSLSQN-----------------KVLK------KAKKWR 626
Query: 796 LPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMK 836
P VGD + V+++G++GT++ + + QVG +K +K
Sbjct: 627 APRVGDDIIVTAYGQRGTLL-AQLKDKRWEAQVGLIKLTLK 666
Score = 35.8 bits (81), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 78/302 (25%), Positives = 137/302 (45%), Gaps = 23/302 (7%)
Query: 54 LRVLEWDKLCHSVSSFARTSLGR-EATLTQLWSINQTYQDSLRLLDETNAAIEMQKHGSC 112
L LE++K+ + +T G+ E L + + Q L+E AAI ++ H
Sbjct: 6 LEQLEFEKVKEQFWPYLQTEQGQLELDLLEPIANKDKIQAYFTELEEM-AAIFVEHH--- 61
Query: 113 SLDLTGVDLSLVKSAIREVRRASPLRPNEALAVVALLQFSETLQLSLRAAIKEDADLYIR 172
L G LS V +++ + + L E LAV LLQ S ++ A E+ DL
Sbjct: 62 HFALGG--LSDVSESMQRLDLEADLSIQELLAVKKLLQVSA--EVCRFYADLENVDL--- 114
Query: 173 FMPLTQMIMQLFVNRSLIKSIMQVVDEDGSIKDSASPALKQSRGQVQMLERKLYQLMDML 232
+ L + ++ SL S +Q +++ G ++ ASP L+ R Q+ E QL+ +
Sbjct: 115 -VALKALFEKIESFPSLQGS-LQAINDAGFVEGFASPELESIRRQISNKEHASRQLLQDI 172
Query: 233 IRNEN---NESLFLEVSSIHGRLCIRT-GADQLSFKGLL--LSSSGIGSVIEPLSAVPLN 286
++ + +ESL ++S +GR + + G++ +S+SG IEP + V LN
Sbjct: 173 LKKQAAYLSESL---IASRNGRSVLPVKNTYRHKVAGVVHDMSASGSTVYIEPRALVSLN 229
Query: 287 DELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSP 346
+EL Q + +L L+E+++ + + LD+V A+ Y + T P
Sbjct: 230 EELTQLQTDERHEIGRILHELSEQLRPHSRSLRNNAWLLGHLDLVRAKYLYMQAKQATVP 289
Query: 347 NI 348
I
Sbjct: 290 VI 291
>sp|A3CKV4|MUTS2_STRSV MutS2 protein OS=Streptococcus sanguinis (strain SK36) GN=mutS2
PE=3 SV=1
Length = 777
Score = 221 bits (564), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 149/390 (38%), Positives = 217/390 (55%), Gaps = 40/390 (10%)
Query: 432 EMQVSALELAHP-----VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLH 486
E + L + HP V D+ +VITGPNTGGKTI LKT+GLA +MA+SGL
Sbjct: 294 EQDIQLLSVRHPLIENAVANDLHFGLDLTEIVITGPNTGGKTIMLKTLGLAQIMAQSGLP 353
Query: 487 ILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAG 546
IL+ + ++V F +FADIGDEQS+ QSLSTFS H+ I +I+ Q S+SLVLLDE+GAG
Sbjct: 354 ILADKGSRVGIFSQIFADIGDEQSIEQSLSTFSSHMTNIVSILEQVDSESLVLLDELGAG 413
Query: 547 TNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTY 606
T+P EG AL +++LE + T+ATTH+ ELK D+ ENA MEFD L+PTY
Sbjct: 414 TDPQEGAALAIAILEDL-RLRQIKTMATTHYPELKAYGIETDWVENASMEFDTDSLRPTY 472
Query: 607 KILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHE 666
+ + GVPGRS+A IA+RLGL ++V +A++ S ++N +I ER + Q L E
Sbjct: 473 RFMQGVPGRSNAFEIAQRLGLSEVIVGHAQEQTDTDS-DVNRII---ERLEEQTL----E 524
Query: 667 ARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSAS 726
+R L R + + L+ R + + K +++ A A+ +V L S S
Sbjct: 525 SRKRLDNIREVEQENLKFNRALKKLYNEFNREKETELNKARLEAQEIV-----DLALSES 579
Query: 727 QARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIK 786
+ S ++LH K ++ + Q + P T S K +K
Sbjct: 580 E--------------SILKNLHDKSSLKPHEIIEAKAQLKKL----APETVDLSKNKVLK 621
Query: 787 QSPRVKRTELPNVGDLVHVSSFGKKGTVIK 816
Q+ K+ P VGD + V+S+G++GT++K
Sbjct: 622 QA---KKNRAPKVGDDILVTSYGQRGTLVK 648
Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 83/165 (50%), Gaps = 3/165 (1%)
Query: 194 MQVVDEDGSIKDSASPALKQSRGQVQMLERKLYQLMDMLIRNENNESLFLEVSSIHGRLC 253
+Q V++ G I+ AS +L + R ++Q E ++ +++ +++N+ V+S +GR
Sbjct: 134 LQAVNDGGFIESFASESLSRIRRKIQENENQVREILQEILKNKGEMLADQVVASRNGRNV 193
Query: 254 I---RTGADQLSFKGLLLSSSGIGSVIEPLSAVPLNDELQQARASVTKAEEDVLLALTEK 310
+ T +++S +S+SG IEP + V LN+E+ +RA + +L L++
Sbjct: 194 LPVKNTYRNRISGVVHDISASGNTVYIEPRAVVNLNEEIASSRADERYEIQRILQELSDL 253
Query: 311 MQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNIFLPQDMK 355
+ EI I LD+V A+ + G P++ QD++
Sbjct: 254 FRPHAAEIANNAWIIGHLDLVRAKVRFMQETGAVVPDLSEEQDIQ 298
>sp|B8I1Z8|MUTS2_CLOCE MutS2 protein OS=Clostridium cellulolyticum (strain ATCC 35319 /
DSM 5812 / JCM 6584 / H10) GN=mutS2 PE=3 SV=1
Length = 792
Score = 221 bits (564), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 136/397 (34%), Positives = 222/397 (55%), Gaps = 42/397 (10%)
Query: 444 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 503
VPID +I K L++TGPNTGGKT+ LKTVGL +M +SGL + +++ ++ F+ ++A
Sbjct: 317 VPIDFWIGEKFSSLIVTGPNTGGKTVSLKTVGLFTLMMQSGLLVPANDGTEMSVFEKIYA 376
Query: 504 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 563
DIGDEQS+ QSLSTFS H+K I +I+S ++SL+LLDE+GAGT+P EG AL MS+LE
Sbjct: 377 DIGDEQSIEQSLSTFSSHMKNIVDILSGVNNKSLILLDELGAGTDPTEGAALAMSILECL 436
Query: 564 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 623
+ G+ T+ATTH+ ELK S ENA EFD L+PTY++L GVPG+S+A I++
Sbjct: 437 HQMGA-TTLATTHYSELKVYAISTTGVENASCEFDVETLRPTYRLLIGVPGKSNAFAISK 495
Query: 624 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLR 683
RLGL +++ +++ ++++ +E+ +++ + A + + L K+L
Sbjct: 496 RLGLTDDIIERSKEFLSQEDIRFEDILLSIEKNRSEAEKEKMRAESYRQEAERLKKDLED 555
Query: 684 TRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSL--------VHKR 735
+R++ A+Q+ +++K A AR ++ S +Q S+ + L V ++
Sbjct: 556 QKRRL----AAQKESELRK---AREEARRILTDSKRQADELVSEMKRLAKEQEEAEVRRQ 608
Query: 736 AQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTE 795
++LR ++S++ N + V+ + P K++K
Sbjct: 609 TEELRQKLNKSIN-------------NLDDSLVESI-MPRQGLVKPPKNLKP-------- 646
Query: 796 LPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMK 832
GD V + + +KGTV+ + E VQ G MK
Sbjct: 647 ----GDTVLIVNLNQKGTVLTLPDKNGEAQVQAGIMK 679
Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/300 (22%), Positives = 140/300 (46%), Gaps = 17/300 (5%)
Query: 55 RVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIE-MQKHGSCS 113
RVLE+DK+ + + LGRE L + Y+ ++L ETN + + + GS
Sbjct: 7 RVLEFDKILDKLKGLTASELGRELVLE--LTPQTDYRVVEKMLSETNDGVSCIMRRGSPP 64
Query: 114 LDLTGVDLSLVKSAIREVRRASPLRPNEALAVVALLQFSETLQLSLRAAIKEDADLYIRF 173
L ++ ++ +++ + L P E L + +L+ + L+ + + E+ ++
Sbjct: 65 LG----GITDIRMSLKRLDMGGVLNPGELLRLAGVLRAARRLKGYINDKLDENNASVVK- 119
Query: 174 MPLTQMIMQLFVNRSLIKSIMQVVDEDGSIKDSASPALKQSRGQVQMLERKLYQLMDMLI 233
++I L N+ L + I + + I D+ASPAL R Q++ + + ++ +I
Sbjct: 120 ----ELISCLESNQRLEQKIDNCILSEDEIADNASPALSSIRRQIKEQQASIKDKLNSII 175
Query: 234 RNENNESLFLE-VSSIHG-RLCIRTGAD-QLSFKGLLLSSSGIGSV--IEPLSAVPLNDE 288
R+ + E V ++ G R I + + GL+ SS G+ IEP++ V N+
Sbjct: 176 RSTKYQKYIQESVVTMRGDRYVIPVKQEHKGDIPGLVHDSSASGATLFIEPMAVVEANNS 235
Query: 289 LQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNI 348
++Q R + +L L++ + L ++ ++ + +LD + A++ ++ + P I
Sbjct: 236 IKQLRVKEQTEIDRILAELSQDASLVLPQLNANMSIMARLDFIFAKSKLAIDYNCICPKI 295
>sp|Q8RIK8|MUTS2_FUSNN MutS2 protein OS=Fusobacterium nucleatum subsp. nucleatum (strain
ATCC 25586 / CIP 101130 / JCM 8532 / LMG 13131) GN=mutS2
PE=3 SV=1
Length = 778
Score = 221 bits (563), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 142/418 (33%), Positives = 225/418 (53%), Gaps = 41/418 (9%)
Query: 431 SEMQVSALELA-HP-------VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAK 482
S ++ +LE A HP P+ I + +L+ITGPNTGGKT+ LKT GL +MA
Sbjct: 294 SNKEILSLEKARHPFIDKDKVTPLTFEIGKDYDILLITGPNTGGKTVALKTAGLLTLMAL 353
Query: 483 SGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDE 542
SG+ I +SE +K+ +F+ VFADIGDEQS+ QSLS+FS HLK + I+ T SLVLLDE
Sbjct: 354 SGIPIPASENSKIGFFEGVFADIGDEQSIEQSLSSFSAHLKNVKEILEAVTKNSLVLLDE 413
Query: 543 IGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKL 602
+G+GT+P+EG A M++++ E + TTH+ ++K Y+ + E A MEF+ L
Sbjct: 414 LGSGTDPIEGAAFAMAVIDYLNEK-KCKSFITTHYSQVKAYGYNEEGIETASMEFNTDTL 472
Query: 603 KPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLE 662
PTY++L G+PG S+A+ IA+R+GLP ++ AR+ + ++ E +IE + K+Q L+
Sbjct: 473 SPTYRLLVGIPGESNALTIAQRMGLPESIISKAREYISEDNKKV-EKMIENIKTKSQELD 531
Query: 663 HVHEARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLC 722
+ E L L + + I+E ++ I +S ++ + +
Sbjct: 532 EMRERFARLQEEARLDRERAKQETLIIEKQKNE-------------IIKSAYEEAEKMMN 578
Query: 723 PSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVV 782
++A +LV K ++ ++ KN ++L++ ++ VE VV
Sbjct: 579 EMRAKASALVEK----IQHEEKNKEDAKQIQKNLNMLSTALREEKNKTVE--------VV 626
Query: 783 KDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 840
K IK K VGD V V S + ++K+ SKE +VQ G +K + F +I
Sbjct: 627 KKIKTKVNFK------VGDRVFVKSINQFANILKINTSKESAMVQSGILKLEVPFDEI 678
Score = 49.7 bits (117), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 86/176 (48%), Gaps = 11/176 (6%)
Query: 172 RFMPLTQMIMQLFVNRSLIKSIMQVVDEDGSIKDSASPALKQSRGQVQMLERKLYQLMDM 231
++ L +MI + R + I + ++ + IKD AS L+ R + L + + +
Sbjct: 112 KYKQLREMIGNIPNLRVIEDVINKTINPEKEIKDDASLDLRDIRLHKKTLNMNIKRKFEE 171
Query: 232 LIRNENNESLFLE--VSSIHGRLCIRTGADQLSFKGLL------LSSSGIGSVIEPLSAV 283
L + + F E ++ GR+ D FKGL+ SSSG IEPLS V
Sbjct: 172 LFEEPSLSNAFQEKIITERDGRMVTPVKYD---FKGLIKGIEHDRSSSGQTVFIEPLSIV 228
Query: 284 PLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSL 339
LN+++++ + +LL + E ++ + D+I + ++ LD++NA++ Y++
Sbjct: 229 SLNNKMRELETKEKEEIRKILLRIAELLRNNKDDILIIGEKVMYLDILNAKSIYAV 284
>sp|Q8E3J5|MUTS2_STRA3 MutS2 protein OS=Streptococcus agalactiae serotype III (strain
NEM316) GN=mutS2 PE=3 SV=1
Length = 779
Score = 221 bits (562), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 140/379 (36%), Positives = 218/379 (57%), Gaps = 41/379 (10%)
Query: 440 LAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFD 499
L++PV D+ + +VITGPNTGGKTI LKT+GLA +M +SGL +L+ + +K+ F+
Sbjct: 307 LSNPVANDLHFDQDLTAIVITGPNTGGKTIMLKTLGLAQLMGQSGLPVLADKGSKIAVFN 366
Query: 500 SVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSL 559
++FADIGDEQS+ QSLSTFS H+ I +I++++ SLVL DE+GAGT+P EG +L M++
Sbjct: 367 NIFADIGDEQSIEQSLSTFSSHMTHIVSILNEADHNSLVLFDELGAGTDPQEGASLAMAI 426
Query: 560 LEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAI 619
LE S ++ T+ATTH+ ELK +F ENA MEFD L PTY+ + GVPGRS+A
Sbjct: 427 LEHLRLS-NIKTMATTHYPELKAYGIETNFVENASMEFDAETLSPTYRFMQGVPGRSNAF 485
Query: 620 NIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSR-NLH 678
IA RLGL +V+ A+Q+ + S ++N +I E+ + Q LE H + + NL
Sbjct: 486 EIASRLGLAPFIVKQAKQMTDSDS-DVNRII---EQLEAQTLETRRRLDHIKEIEQENLK 541
Query: 679 KNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKR--- 735
N R +K+ + +R ++++KI ++ AQ++ A + K+
Sbjct: 542 FN--RAVKKLYNEFSHERDKELEKI-----------YQEAQEIVDMALNESDTILKKLND 588
Query: 736 AQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTE 795
QL+P H K Q + K+ S + V + ++ ++K
Sbjct: 589 KSQLKP------HEIIDAKAQ-----------IKKLAPQVDLSKNKV--LNKAKKIKAAR 629
Query: 796 LPNVGDLVHVSSFGKKGTV 814
P +GD + V+S+G++GT+
Sbjct: 630 APRIGDDIIVTSYGQRGTL 648
Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 111/239 (46%), Gaps = 22/239 (9%)
Query: 119 VDLSLVKSAIREVRRASPLRPNEALAVVALLQFSETLQLSLRAAIKEDADL-YIRFMPLT 177
V LS + +++ + ++ L E L + +LQ S + I +DL + F L
Sbjct: 66 VSLSSISESLKRLELSADLNIQELLVIKKVLQSSSDM-------IHFYSDLDNVSFQSLD 118
Query: 178 QMIMQL--FVNRSLIKSIMQVVDEDGSIKDSASPALKQSRGQVQMLERKLYQLM-DMLIR 234
++ L F N ++ Q +++ G ++ ASP L++ R Q+ ER++ Q++ DML
Sbjct: 119 RLFENLEQFPN---LQGSFQAINDGGFLEHFASPELERIRRQLTNSERRVRQILQDML-- 173
Query: 235 NENNESLFLE--VSSIHGRLCI---RTGADQLSFKGLLLSSSGIGSVIEPLSAVPLNDEL 289
+ L E ++S GR + T +++S +SSSG IEP + V LN+E+
Sbjct: 174 -KEKAELLSENLIASRSGRSVLPVKNTYRNRISGVVHDISSSGSTVYIEPRAVVTLNEEI 232
Query: 290 QQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNI 348
Q RA E +L A ++ ++ + I + LD V A+ + T P I
Sbjct: 233 TQLRADERHEESRILHAFSDLLRPHVATIRNNAWILGHLDFVRAKYLFMSDNKATIPEI 291
>sp|Q8DXX6|MUTS2_STRA5 MutS2 protein OS=Streptococcus agalactiae serotype V (strain ATCC
BAA-611 / 2603 V/R) GN=mutS2 PE=3 SV=1
Length = 779
Score = 220 bits (561), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 140/381 (36%), Positives = 220/381 (57%), Gaps = 45/381 (11%)
Query: 440 LAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFD 499
L++PV D+ + +VITGPNTGGKTI LKT+GLA +M +SGL +L+ + +K+ F+
Sbjct: 307 LSNPVANDLHFDQDLTAIVITGPNTGGKTIMLKTLGLAQLMGQSGLPVLADKGSKIAVFN 366
Query: 500 SVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSL 559
++FADIGDEQS+ QSLSTFS H+ I +I++++ SLVL DE+GAGT+P EG +L M++
Sbjct: 367 NIFADIGDEQSIEQSLSTFSSHMTHIVSILNEADHNSLVLFDELGAGTDPQEGASLAMAI 426
Query: 560 LEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAI 619
LE S ++ T+ATTH+ ELK +F ENA MEFD L PTY+ + GVPGRS+A
Sbjct: 427 LEHLRLS-NIKTMATTHYPELKAYGIETNFVENASMEFDAETLSPTYRFMQGVPGRSNAF 485
Query: 620 NIAERLGLPGIVVQNARQLYGAASAEINEVI--IEMERFKTQF-LEHVHEARHFLMLSRN 676
IA RLGL +V+ A+Q+ + S ++N +I +E + +T+ L+H+ E N
Sbjct: 486 EIASRLGLAPFIVKQAKQMTDSDS-DVNRIIEQLEAQTLETRRRLDHIKEVEQ-----EN 539
Query: 677 LHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKR- 735
L N R +K+ + +R ++++KI ++ AQ++ A + K+
Sbjct: 540 LKFN--RAVKKLYNEFSHERDKELEKI-----------YQEAQEIVDMALNESDTILKKL 586
Query: 736 --AQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKR 793
QL+P H K Q + K+ S + V + ++ ++K
Sbjct: 587 NDKSQLKP------HEIIDAKAQ-----------IKKLAPQVDLSKNKV--LNKAKKIKA 627
Query: 794 TELPNVGDLVHVSSFGKKGTV 814
P +GD + V+S+G++GT+
Sbjct: 628 ARAPRIGDDIIVTSYGQRGTL 648
Score = 47.4 bits (111), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 113/239 (47%), Gaps = 22/239 (9%)
Query: 119 VDLSLVKSAIREVRRASPLRPNEALAVVALLQFSETLQLSLRAAIKEDADL-YIRFMPLT 177
V LS + +++ + ++ L E LA+ +LQ S + I +DL + F L
Sbjct: 66 VSLSSISESLKRLELSADLNIQELLAIKKVLQSSSDM-------IHFYSDLDNVSFQSLD 118
Query: 178 QMIMQL--FVNRSLIKSIMQVVDEDGSIKDSASPALKQSRGQVQMLERKLYQLM-DMLIR 234
++ L F N ++ Q +++ G ++ ASP L++ R Q+ ER++ Q++ DML
Sbjct: 119 RLFENLEQFPN---LQGSFQAINDGGFLEHFASPELERIRRQLTNSERRVRQILQDMLKE 175
Query: 235 NEN--NESLFLEVSSIHGRLCI---RTGADQLSFKGLLLSSSGIGSVIEPLSAVPLNDEL 289
+E+L ++S GR + T +++S +SSSG IEP + V LN+E+
Sbjct: 176 KAELLSENL---IASRSGRSVLPVKNTYRNRISGVVHDISSSGSTVYIEPRAVVTLNEEI 232
Query: 290 QQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNI 348
Q RA E +L A ++ ++ + I + LD V A+ + T P I
Sbjct: 233 TQLRADERHEESRILHAFSDLLRPHVATIRNNAWILGHLDFVRAKYLFMSDNKATIPEI 291
>sp|Q3JZH6|MUTS2_STRA1 MutS2 protein OS=Streptococcus agalactiae serotype Ia (strain ATCC
27591 / A909 / CDC SS700) GN=mutS2 PE=3 SV=1
Length = 779
Score = 220 bits (561), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 140/381 (36%), Positives = 220/381 (57%), Gaps = 45/381 (11%)
Query: 440 LAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFD 499
L++PV D+ + +VITGPNTGGKTI LKT+GLA +M +SGL +L+ + +K+ F+
Sbjct: 307 LSNPVANDLHFDQDLTAIVITGPNTGGKTIMLKTLGLAQLMGQSGLPVLADKGSKIAVFN 366
Query: 500 SVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSL 559
++FADIGDEQS+ QSLSTFS H+ I +I++++ SLVL DE+GAGT+P EG +L M++
Sbjct: 367 NIFADIGDEQSIEQSLSTFSSHMTHIVSILNEADHNSLVLFDELGAGTDPQEGASLAMAI 426
Query: 560 LEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAI 619
LE S ++ T+ATTH+ ELK +F ENA MEFD L PTY+ + GVPGRS+A
Sbjct: 427 LEHLRLS-NIKTMATTHYPELKAYGIETNFVENASMEFDAETLSPTYRFMQGVPGRSNAF 485
Query: 620 NIAERLGLPGIVVQNARQLYGAASAEINEVI--IEMERFKTQF-LEHVHEARHFLMLSRN 676
IA RLGL +V+ A+Q+ + S ++N +I +E + +T+ L+H+ E N
Sbjct: 486 EIASRLGLAPFIVKQAKQMTDSDS-DVNRIIEQLEAQTLETRRRLDHIKEVEQ-----EN 539
Query: 677 LHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKR- 735
L N R +K+ + +R ++++KI ++ AQ++ A + K+
Sbjct: 540 LKFN--RAVKKLYNEFSHERDKELEKI-----------YQEAQEIVDMALNESDTILKKL 586
Query: 736 --AQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKR 793
QL+P H K Q + K+ S + V + ++ ++K
Sbjct: 587 NDKSQLKP------HEIIDAKAQ-----------IKKLAPQVDLSKNKV--LNKAKKIKA 627
Query: 794 TELPNVGDLVHVSSFGKKGTV 814
P +GD + V+S+G++GT+
Sbjct: 628 ARAPRIGDDIIVTSYGQRGTL 648
Score = 47.4 bits (111), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 113/239 (47%), Gaps = 22/239 (9%)
Query: 119 VDLSLVKSAIREVRRASPLRPNEALAVVALLQFSETLQLSLRAAIKEDADL-YIRFMPLT 177
V LS + +++ + ++ L E LA+ +LQ S + I +DL + F L
Sbjct: 66 VSLSSISESLKRLELSADLNIQELLAIKKVLQSSSDM-------IHFYSDLDNVSFQSLD 118
Query: 178 QMIMQL--FVNRSLIKSIMQVVDEDGSIKDSASPALKQSRGQVQMLERKLYQLM-DMLIR 234
++ L F N ++ Q +++ G ++ ASP L++ R Q+ ER++ Q++ DML
Sbjct: 119 RLFENLEQFPN---LQGSFQAINDGGFLEHFASPELERIRRQLTNSERRVRQILQDMLKE 175
Query: 235 NEN--NESLFLEVSSIHGRLCI---RTGADQLSFKGLLLSSSGIGSVIEPLSAVPLNDEL 289
+E+L ++S GR + T +++S +SSSG IEP + V LN+E+
Sbjct: 176 KAELLSENL---IASRSGRSVLPVKNTYRNRISGVVHDISSSGSTVYIEPRAVVTLNEEI 232
Query: 290 QQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNI 348
Q RA E +L A ++ ++ + I + LD V A+ + T P I
Sbjct: 233 TQLRADERHEESRILHAFSDLLRPHVATIRNNAWILGHLDFVRAKYLFMSDNKATIPEI 291
>sp|A6TNX0|MUTS2_ALKMQ MutS2 protein OS=Alkaliphilus metalliredigens (strain QYMF)
GN=mutS2 PE=3 SV=1
Length = 789
Score = 220 bits (561), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 147/418 (35%), Positives = 217/418 (51%), Gaps = 70/418 (16%)
Query: 444 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 503
VP +++I + LVITGPNTGGKT+ LKT+GL MMA+SGLH+ + ++ FD +FA
Sbjct: 317 VPTNLWIGETFQTLVITGPNTGGKTVTLKTLGLLSMMAQSGLHVPADYGTRLAIFDQIFA 376
Query: 504 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 563
DIGDEQS+ QSLSTFS H+ I NI+ + TS SLVL DE+GAGT+P EG ALGM++L
Sbjct: 377 DIGDEQSIEQSLSTFSSHMTNIVNIVEEVTSNSLVLFDELGAGTDPTEGAALGMAILNHL 436
Query: 564 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 623
E ++ T+ATTH+ ELK +N+ ENA +EFD L PTY++L GVPG+S+A I++
Sbjct: 437 REM-NVTTVATTHYSELKQYALTNEGVENASVEFDVATLSPTYRLLIGVPGKSNAFEISK 495
Query: 624 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLR 683
+LGLP +VQ A+ RF +Q + HF L +N+ KN
Sbjct: 496 KLGLPDGLVQRAK------------------RFLSQ------DTIHFEDLLQNIEKN--- 528
Query: 684 TRRKILEHCASQRFR-KVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPS 742
R +E ++R R + +K ++ + + L +R Q LR +
Sbjct: 529 RRESEIERQEAKRIRLEAEKFAEGY-----------------EDRKQRLEAQRDQILRDA 571
Query: 743 ASQSLHCTKVGK--NQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPN-- 798
++ K K ++H++ + K E A + ++D K K +L +
Sbjct: 572 KKEAYRLVKEAKMDSEHIIKGLREM----KFELEAKEMNKKMEDAKNQLTGKMNDLSDHH 627
Query: 799 ----------------VGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 840
GD V + S + G V+ K E+ VQ G MK M +++
Sbjct: 628 QQILNKKNKKPPKNLKPGDAVRILSLNQVGHVLNEVDPKGEVQVQAGIMKVNMHISNL 685
Score = 42.4 bits (98), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 73/303 (24%), Positives = 136/303 (44%), Gaps = 21/303 (6%)
Query: 52 ESLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAA--IEMQKH 109
+S+RVLE+ K+ + +++ +E +L I Q++ + +L ET+ A I +Q+
Sbjct: 4 KSIRVLEYGKMIDRLEERCLSAMAKEKA-RELRPI-QSFGEITQLQSETSEAQSILIQR- 60
Query: 110 GSCSLDLTGVDLSLVKSAIREVRRASPLRPNEALAVVALLQFSETLQLSLRAAIKEDADL 169
++ L G+ +K +R+ S L P E L V L+ + +L++ KE D
Sbjct: 61 --GNIPLGGI--HDIKQYLRKTEIGSYLDPKELLLVKDTLRTAR----NLKSFFKEGDD- 111
Query: 170 YIRFMPLTQMIMQLFVNRSLIKSIMQVVDEDGSIKDSASPALKQSRGQVQMLERKLYQLM 229
+ ++ +I L R++ I + D I D AS LK R Q+ + +
Sbjct: 112 QTKHPIVSGLIQGLQSFRAIEDRIEICIVSDTEISDHASSTLKNIRRQISSKNDAVRNKL 171
Query: 230 DMLIRNENNESLFLEVSSI---HGRLCIRTGADQL-SFKGLL--LSSSGIGSVIEPLSAV 283
+ +I N + +L+ + I R + + + GL+ SSSG +EP++ V
Sbjct: 172 NGII-NSSTTQKYLQDAIITMRQDRYVVPVKQEHRGNVPGLIHDQSSSGATLFVEPMAVV 230
Query: 284 PLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGG 343
LN+EL++ + E +L+ + E + E+ + +D V A+ SL G
Sbjct: 231 QLNNELRELKIKEHIEIERILMEIAEMIAQYATEMRNNQIILTAIDFVFAKGKLSLEMKG 290
Query: 344 TSP 346
P
Sbjct: 291 VEP 293
>sp|Q835H3|MUTS2_ENTFA MutS2 protein OS=Enterococcus faecalis (strain ATCC 700802 / V583)
GN=mutS2 PE=3 SV=1
Length = 788
Score = 220 bits (560), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 142/389 (36%), Positives = 222/389 (57%), Gaps = 28/389 (7%)
Query: 444 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 503
V DI I + + +VITGPNTGGKTI LKT+GL +M ++GL I E +K+ F VFA
Sbjct: 317 VANDIVIGEEYQAIVITGPNTGGKTITLKTLGLLQLMGQAGLPIPVEEESKMGIFTEVFA 376
Query: 504 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 563
DIGDEQS+ QSLSTFS H+ I +++ + QSLVL DE+GAGT+P EG AL +++L++
Sbjct: 377 DIGDEQSIEQSLSTFSSHMTNIVSVLKKVDHQSLVLFDELGAGTDPQEGAALAIAILDSL 436
Query: 564 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 623
G+ + +ATTH+ ELK Y+ NA MEFD L PTY++L GVPGRS+A I++
Sbjct: 437 GAKGAYV-MATTHYPELKVYGYNRAGTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISK 495
Query: 624 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLR 683
RLGL +++ A+Q+ S ++NE+I ++E + EARH++ S LHK L
Sbjct: 496 RLGLDNSIIEAAKQIMDGESQDLNEMIEDLENRRKMAETEYLEARHYVDESAALHKELKE 555
Query: 684 TRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSA 743
+ E +R +++QK K A ++ A + + ++++ +
Sbjct: 556 AYQVFFE----EREKELQK-----------ARKEANKIIAEAEENAETIISDIRKMQLES 600
Query: 744 SQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLV 803
Q + G +H L +T + ++ H T + K+ K + K + GD V
Sbjct: 601 GQ-----QGGVKEHQLID--AKTQLSQLHHEET---KLAKN-KVLKKAKEQKKLKAGDEV 649
Query: 804 HVSSFGKKGTVIKVEPSKEEIVVQVGNMK 832
V+++G++GT++K + K + VQ+G +K
Sbjct: 650 IVNTYGQRGTLLK-DNGKGQWQVQLGILK 677
Score = 50.4 bits (119), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 80/171 (46%), Gaps = 4/171 (2%)
Query: 182 QLFVNRSLIKSIMQVVDEDGSIKDSASPALKQSRGQVQMLERKLYQLMDMLIRNENNESL 241
QL V L + + Q +D+DG + D ASPALK R ++ E+ + + +D +IR +N L
Sbjct: 125 QLEVLPELNRQLKQAIDDDGYVTDEASPALKAIRQNIRRSEQTIREELDSIIRGKNARYL 184
Query: 242 FLEVSSIHG-RLCIRTGADQLSFKGLLL---SSSGIGSVIEPLSAVPLNDELQQARASVT 297
+ ++ R I + + G ++ S+SG IEP + +N+ L+Q + +
Sbjct: 185 SDALVTMRNERYVIPVKQEYKNIFGGVVHDQSASGQTLFIEPKQILEMNNRLRQQQIAER 244
Query: 298 KAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNI 348
+L L+ ++ EI I +LD +NA+A P I
Sbjct: 245 NEITRILAELSAELVPYRREITHNAYVIGKLDFINAKARLGKELKAVVPEI 295
>sp|Q6GHU1|MUTS2_STAAR MutS2 protein OS=Staphylococcus aureus (strain MRSA252) GN=mutS2
PE=3 SV=1
Length = 782
Score = 219 bits (559), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 137/386 (35%), Positives = 218/386 (56%), Gaps = 38/386 (9%)
Query: 457 LVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLS 516
++ITGPNTGGKT+ LKT+GL ++MA+SGL I + + +++ F +V+ DIGDEQS+ QSLS
Sbjct: 332 VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVFKNVYCDIGDEQSIEQSLS 391
Query: 517 TFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTH 576
TFS H+ I I+ + SLVL DE+GAGT+P EG AL MS+L+ + GSL+ +ATTH
Sbjct: 392 TFSSHMTNIVEILKNADKHSLVLFDELGAGTDPSEGAALAMSILDHVRKIGSLV-MATTH 450
Query: 577 HGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNAR 636
+ ELK Y+ + NA +EFD L PTYK+L GVPGRS+A +I+++LGL ++ A+
Sbjct: 451 YPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAFDISKKLGLSLNIINKAK 510
Query: 637 QLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQR 696
+ G EINE+I +ER + E + + +H +L + Q+
Sbjct: 511 TMIGTDEKEINEMIESLERNYKRVETQRLELDRLVKEAEQVHDDLSK---------QYQQ 561
Query: 697 FRKVQK--ISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGK 754
F+ +K I DA K+ Q++ + +A ++ K +QLR + ++
Sbjct: 562 FQNYEKSLIEDAK-------EKANQKIKAATKEADDII-KDLRQLREQKGADVKEHELID 613
Query: 755 NQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTV 814
+ L +++ K IKQ+ + ++ + GD V V S+G+KG V
Sbjct: 614 KKKRLDDHYE-----------------AKSIKQNVQKQKYDKIVAGDEVKVLSYGQKGEV 656
Query: 815 IKVEPSKEEIVVQVGNMKWIMKFTDI 840
+++ + EE +VQ+G +K + D+
Sbjct: 657 LEI-VNDEEAIVQMGIIKMKLPIEDL 681
>sp|Q9ZEH5|MUTS2_STAAU MutS2 protein (Fragment) OS=Staphylococcus aureus GN=mutSB PE=3
SV=1
Length = 719
Score = 219 bits (559), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 137/386 (35%), Positives = 218/386 (56%), Gaps = 38/386 (9%)
Query: 457 LVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLS 516
++ITGPNTGGKT+ LKT+GL ++MA+SGL I + + +++ F +V+ DIGDEQS+ QSLS
Sbjct: 269 VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVFKNVYCDIGDEQSIEQSLS 328
Query: 517 TFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTH 576
TFS H+ I I+ + SLVL DE+GAGT+P EG AL MS+L+ + GSL+ +ATTH
Sbjct: 329 TFSSHMTNIVEILKNADKHSLVLFDELGAGTDPSEGAALAMSILDHVRKIGSLV-MATTH 387
Query: 577 HGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNAR 636
+ ELK Y+ + NA +EFD L PTYK+L GVPGRS+A +I+++LGL ++ A+
Sbjct: 388 YPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAFDISKKLGLSLNIINKAK 447
Query: 637 QLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQR 696
+ G EINE+I +ER + E + + +H +L + Q+
Sbjct: 448 TMIGTDEKEINEMIESLERNYKRVETQRLELDRLVKEAEQVHDDLSK---------QYQQ 498
Query: 697 FRKVQK--ISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGK 754
F+ +K I DA K+ Q++ + +A ++ K +QLR + ++
Sbjct: 499 FQNYEKSLIEDAK-------EKANQKIKAATKEADDII-KDLRQLREQKGADVKEHELID 550
Query: 755 NQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTV 814
+ L +++ K IKQ+ + ++ + GD V V S+G+KG V
Sbjct: 551 KKKRLDDHYE-----------------AKSIKQNVQKQKYDKIVAGDEVKVLSYGQKGEV 593
Query: 815 IKVEPSKEEIVVQVGNMKWIMKFTDI 840
+++ + EE +VQ+G +K + D+
Sbjct: 594 LEI-VNDEEAIVQMGIIKMKLPIEDL 618
>sp|Q8DSD1|MUTS2_STRMU MutS2 protein OS=Streptococcus mutans serotype c (strain ATCC
700610 / UA159) GN=mutS2 PE=3 SV=1
Length = 776
Score = 219 bits (558), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 130/297 (43%), Positives = 173/297 (58%), Gaps = 22/297 (7%)
Query: 440 LAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFD 499
L++P+ D+ T ++ITGPNTGGKTI LKT+G+ +MA+SGL IL+ E +KV F
Sbjct: 307 LSNPIANDLHFEHDTTAILITGPNTGGKTIMLKTLGITQLMAQSGLPILADEGSKVAVFK 366
Query: 500 SVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSL 559
+FADIGDEQS+ QSLSTFS H+ I I+ ++ SLVL DE+GAGT+P EG AL MS+
Sbjct: 367 DIFADIGDEQSIEQSLSTFSSHMTHIVEILQKANKDSLVLFDELGAGTDPQEGAALAMSI 426
Query: 560 LEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAI 619
LE S + T+ TTH+ ELK +F ENA MEFD V L PTY + GVPGRS+A
Sbjct: 427 LEHLRLS-DIKTMITTHYPELKAYGIETEFIENASMEFDMVTLSPTYHFMQGVPGRSNAF 485
Query: 620 NIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHK 679
IA RLGL I+V A L S ++N++I ER + Q + E+R L R + +
Sbjct: 486 EIARRLGLSEIIVAEAENLTNTDS-DVNKII---ERLENQTI----ESRRRLDNIREVEQ 537
Query: 680 NLLRTRRKI------LEHCASQRFR----KVQKISDAAAIARSLVHKSAQ---QLCP 723
L+ R + H + R K Q+I D A + K+ Q QL P
Sbjct: 538 ENLKFNRAVKKLYNEFSHAQDKELRKAKLKAQEIVDKALAESDFILKNLQDKAQLKP 594
Score = 49.3 bits (116), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 69/322 (21%), Positives = 139/322 (43%), Gaps = 29/322 (9%)
Query: 54 LRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIEMQKHGSCS 113
L+ LE+DK+ + F ++ G + L L + + + + A Q++ S
Sbjct: 6 LKALEFDKVKKQFTHFLQSEQG-QMELNDLLPMTNQEKIERSFAEIADVAQIFQEYASFG 64
Query: 114 LDLTGVDLSLVKSAIREVRRASPLRPNEALAVVALLQFSETLQLSLRAAIKEDADLYIRF 173
+ D+S ++R + + L E LAV +LQ S L+ D Y
Sbjct: 65 FGHSQ-DIS---ESLRRLELGADLNTQELLAVKRILQMSAELK-----------DFYDNL 109
Query: 174 MPLTQMIMQLFVNR----SLIKSIMQVVDEDGSIKDSASPALKQSRGQVQMLERKLYQLM 229
+ I+ + ++ +Q +++ G I+D ASP L + R + E+++ Q++
Sbjct: 110 ENVDLQILDCLFEKIETFPDLQGSLQAINDGGFIEDFASPELTKIRHHIHQNEQQIRQIL 169
Query: 230 DMLIRNENN---ESLFLEVSSIHGRLCIRT-GADQLSFKGLL--LSSSGIGSVIEPLSAV 283
+++ + + E+L ++S GR + + G++ +S+SG IEP + V
Sbjct: 170 QEMLKKQGDLLAENL---IASRSGRSVLPVKNTYRHRIAGVIHDISASGNTVYIEPRAVV 226
Query: 284 PLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGG 343
LN+E+ QARA +L L+++++ D I + +D V + Y
Sbjct: 227 NLNEEMTQARADERHEMTRILHDLSDRLRSQTDIIGNNAWLLGHIDFVRGKYLYMRENQA 286
Query: 344 TSPNIFLPQDMKRSLTHEPVTS 365
+ P++ Q ++ P+ S
Sbjct: 287 SLPSLTTDQTIRLLSVRHPLLS 308
>sp|B5XI46|MUTS2_STRPZ MutS2 protein OS=Streptococcus pyogenes serotype M49 (strain NZ131)
GN=mutS2 PE=3 SV=1
Length = 779
Score = 218 bits (556), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 140/381 (36%), Positives = 218/381 (57%), Gaps = 45/381 (11%)
Query: 440 LAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFD 499
L++PV D+ +VITGPNTGGKTI LKT+GLA +M +SGL +L+ + +K+ F+
Sbjct: 307 LSNPVANDLHFDHDLTAIVITGPNTGGKTIMLKTLGLAQLMGQSGLPVLADKGSKITVFN 366
Query: 500 SVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSL 559
++FADIGDEQS+ QSLSTFS H+ I +I++++ SLVL DE+GAGT+P EG +L M++
Sbjct: 367 NIFADIGDEQSIEQSLSTFSSHMTHIVSILNEADRNSLVLFDELGAGTDPQEGASLAMAI 426
Query: 560 LEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAI 619
LE S + T+ATTH+ ELK +F ENA MEFD L PTY+ + GVPGRS+A
Sbjct: 427 LEHLRLS-HIKTMATTHYPELKAYGIETNFVENASMEFDAETLSPTYRFMQGVPGRSNAF 485
Query: 620 NIAERLGLPGIVVQNARQLYGAASAEINEVI--IEMERFKTQF-LEHVHEARHFLMLSRN 676
IA RLGL +V+ A+Q+ + S ++N +I +E + +T+ L+H+ E N
Sbjct: 486 EIASRLGLAPFIVKQAKQMTDSDS-DVNRIIEQLEAQTLETRRRLDHIKEVEQ-----EN 539
Query: 677 LHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKR- 735
L N R +K+ + +R ++++KI ++ AQ++ A + K+
Sbjct: 540 LKFN--RAVKKLYNEFSHERDKELEKI-----------YQEAQEIVDMALNESDTILKKL 586
Query: 736 --AQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKR 793
QL+P H K Q + K+ S + V + ++ ++K
Sbjct: 587 NDKSQLKP------HEIIDAKAQ-----------IKKLAPQVDLSKNKV--LNKAKKIKA 627
Query: 794 TELPNVGDLVHVSSFGKKGTV 814
P +GD + V+S+G++GT+
Sbjct: 628 ARAPRIGDDIIVTSYGQRGTL 648
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 112/239 (46%), Gaps = 22/239 (9%)
Query: 119 VDLSLVKSAIREVRRASPLRPNEALAVVALLQFSETLQLSLRAAIKEDADLY-IRFMPLT 177
V LS + +++ + ++ L E LA+ +LQ S + I +DL I F L
Sbjct: 66 VSLSSISESLKRLELSADLNIQELLAIKKVLQSSSDM-------IHFYSDLNNISFQSLD 118
Query: 178 QMIMQL--FVNRSLIKSIMQVVDEDGSIKDSASPALKQSRGQVQMLERKLYQLM-DMLIR 234
++ L F N ++ Q +++ G ++ ASP L++ R Q+ ER++ Q++ DML
Sbjct: 119 RLFENLEQFPN---LQGSFQAINDGGFLEHFASPELERIRRQLTNSERRVRQILQDML-- 173
Query: 235 NENNESLFLE--VSSIHGRLCI---RTGADQLSFKGLLLSSSGIGSVIEPLSAVPLNDEL 289
+ L E ++S GR + T +++S +SSSG IEP + V LN+E+
Sbjct: 174 -KEKAELLSENLIASRSGRSVLPVKNTYRNRISGVVHDISSSGTTVYIEPRAVVTLNEEI 232
Query: 290 QQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNI 348
Q RA E +L A ++ ++ + I + LD V A+ + T P I
Sbjct: 233 TQLRADERHEEGRILHAFSDLLRPHVATIRNNAWILGHLDFVRAKYLFMSDNKATIPKI 291
>sp|Q99Y73|MUTS2_STRP1 MutS2 protein OS=Streptococcus pyogenes serotype M1 GN=mutS2 PE=3
SV=1
Length = 779
Score = 218 bits (556), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 140/381 (36%), Positives = 218/381 (57%), Gaps = 45/381 (11%)
Query: 440 LAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFD 499
L++PV D+ +VITGPNTGGKTI LKT+GLA +M +SGL +L+ + +K+ F+
Sbjct: 307 LSNPVANDLHFDHDLTAIVITGPNTGGKTIMLKTLGLAQLMGQSGLPVLADKGSKIAVFN 366
Query: 500 SVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSL 559
++FADIGDEQS+ QSLSTFS H+ I +I++++ SLVL DE+GAGT+P EG +L M++
Sbjct: 367 NIFADIGDEQSIEQSLSTFSSHMTHIVSILNEADHNSLVLFDELGAGTDPQEGASLAMAI 426
Query: 560 LEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAI 619
LE S + T+ATTH+ ELK +F ENA MEFD L PTY+ + GVPGRS+A
Sbjct: 427 LEHLRLS-HIKTMATTHYPELKAYGIETNFVENASMEFDAETLSPTYRFMQGVPGRSNAF 485
Query: 620 NIAERLGLPGIVVQNARQLYGAASAEINEVI--IEMERFKTQF-LEHVHEARHFLMLSRN 676
IA RLGL +V+ A+Q+ + S ++N +I +E + +T+ L+H+ E N
Sbjct: 486 EIASRLGLAPFIVKQAKQMTDSDS-DVNRIIEQLEAQTLETRRRLDHIKEVEQ-----EN 539
Query: 677 LHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKR- 735
L N R +K+ + +R ++++KI ++ AQ++ A + K+
Sbjct: 540 LKFN--RAVKKLYNEFSHERDKELEKI-----------YQEAQEIVDMALNESDTILKKL 586
Query: 736 --AQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKR 793
QL+P H K Q + K+ S + V + ++ ++K
Sbjct: 587 NDKSQLKP------HEIIDAKAQ-----------IKKLAPQVDLSKNKV--LNKAKKIKA 627
Query: 794 TELPNVGDLVHVSSFGKKGTV 814
P +GD + V+S+G++GT+
Sbjct: 628 ARAPRIGDDIIVTSYGQRGTL 648
Score = 47.4 bits (111), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 113/239 (47%), Gaps = 22/239 (9%)
Query: 119 VDLSLVKSAIREVRRASPLRPNEALAVVALLQFSETLQLSLRAAIKEDADL-YIRFMPLT 177
V LS + +++ + ++ L E LA+ +LQ S + I +DL + F L
Sbjct: 66 VSLSSISESLKRLELSTDLNIQELLAIKKVLQSSSDM-------IHFYSDLDNVSFQSLD 118
Query: 178 QMIMQL--FVNRSLIKSIMQVVDEDGSIKDSASPALKQSRGQVQMLERKLYQLM-DMLIR 234
++ L F N ++ Q +++ G ++ ASP L++ R Q+ ER++ Q++ DML
Sbjct: 119 RLFENLEQFPN---LQGSFQAINDGGFLEHFASPELERIRRQLTNSERRVRQILQDMLKE 175
Query: 235 NEN--NESLFLEVSSIHGRLCI---RTGADQLSFKGLLLSSSGIGSVIEPLSAVPLNDEL 289
+E+L ++S GR + T +++S +SSSG IEP + V LN+E+
Sbjct: 176 KAELLSENL---IASRSGRSVLPVKNTYRNRISGVVHDISSSGSTVYIEPRAVVTLNEEI 232
Query: 290 QQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNI 348
Q RA E +L A ++ ++ + I + LD V A+ + T P I
Sbjct: 233 TQLRADERHEEGRILHAFSDLLRPHVATIRNNAWILGHLDFVRAKYLFMSDNKATIPKI 291
>sp|A5IS30|MUTS2_STAA9 MutS2 protein OS=Staphylococcus aureus (strain JH9) GN=mutS2 PE=3
SV=1
Length = 782
Score = 218 bits (556), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 134/384 (34%), Positives = 217/384 (56%), Gaps = 34/384 (8%)
Query: 457 LVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLS 516
++ITGPNTGGKT+ LKT+GL ++MA+SGL I + + +++ F +V+ DIGDEQS+ QSLS
Sbjct: 332 VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVFKNVYCDIGDEQSIEQSLS 391
Query: 517 TFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTH 576
TFS H+ I I+ + SLVL DE+GAGT+P EG AL MS+L+ + GSL+ +ATTH
Sbjct: 392 TFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEGAALAMSILDHVRKIGSLV-MATTH 450
Query: 577 HGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNAR 636
+ ELK Y+ + NA +EFD L PTYK+L GVPGRS+A +I+++LGL ++ A+
Sbjct: 451 YPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAFDISKKLGLSLNIINKAK 510
Query: 637 QLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQR 696
+ G EINE+I +ER + E + + +H +L + Q+
Sbjct: 511 TMIGTDEKEINEMIESLERNYKRVETQRLELDRLVKEAEQVHDDLSK---------QYQQ 561
Query: 697 FRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQ 756
F+ +K ++ K+ Q++ + +A ++ K +QLR + ++ +
Sbjct: 562 FQNYEK-----SLIEEAKEKANQKIKAATKEADDII-KDLRQLREQKGADVKEHELIDKK 615
Query: 757 HVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIK 816
L +++ K IKQ+ + ++ + GD V V S+G+KG V++
Sbjct: 616 KRLDDHYE-----------------AKSIKQNVQKQKYDKIVAGDEVKVLSYGQKGEVLE 658
Query: 817 VEPSKEEIVVQVGNMKWIMKFTDI 840
+ + EE +VQ+G +K + D+
Sbjct: 659 I-VNDEEAIVQMGIIKMKLPIEDL 681
>sp|A6U0W1|MUTS2_STAA2 MutS2 protein OS=Staphylococcus aureus (strain JH1) GN=mutS2 PE=3
SV=1
Length = 782
Score = 218 bits (556), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 134/384 (34%), Positives = 217/384 (56%), Gaps = 34/384 (8%)
Query: 457 LVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLS 516
++ITGPNTGGKT+ LKT+GL ++MA+SGL I + + +++ F +V+ DIGDEQS+ QSLS
Sbjct: 332 VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVFKNVYCDIGDEQSIEQSLS 391
Query: 517 TFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTH 576
TFS H+ I I+ + SLVL DE+GAGT+P EG AL MS+L+ + GSL+ +ATTH
Sbjct: 392 TFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEGAALAMSILDHVRKIGSLV-MATTH 450
Query: 577 HGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNAR 636
+ ELK Y+ + NA +EFD L PTYK+L GVPGRS+A +I+++LGL ++ A+
Sbjct: 451 YPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAFDISKKLGLSLNIINKAK 510
Query: 637 QLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQR 696
+ G EINE+I +ER + E + + +H +L + Q+
Sbjct: 511 TMIGTDEKEINEMIESLERNYKRVETQRLELDRLVKEAEQVHDDLSK---------QYQQ 561
Query: 697 FRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQ 756
F+ +K ++ K+ Q++ + +A ++ K +QLR + ++ +
Sbjct: 562 FQNYEK-----SLIEEAKEKANQKIKAATKEADDII-KDLRQLREQKGADVKEHELIDKK 615
Query: 757 HVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIK 816
L +++ K IKQ+ + ++ + GD V V S+G+KG V++
Sbjct: 616 KRLDDHYE-----------------AKSIKQNVQKQKYDKIVAGDEVKVLSYGQKGEVLE 658
Query: 817 VEPSKEEIVVQVGNMKWIMKFTDI 840
+ + EE +VQ+G +K + D+
Sbjct: 659 I-VNDEEAIVQMGIIKMKLPIEDL 681
>sp|P65496|MUTS2_STAAN MutS2 protein OS=Staphylococcus aureus (strain N315) GN=mutS2 PE=1
SV=1
Length = 782
Score = 218 bits (556), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 134/384 (34%), Positives = 217/384 (56%), Gaps = 34/384 (8%)
Query: 457 LVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLS 516
++ITGPNTGGKT+ LKT+GL ++MA+SGL I + + +++ F +V+ DIGDEQS+ QSLS
Sbjct: 332 VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVFKNVYCDIGDEQSIEQSLS 391
Query: 517 TFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTH 576
TFS H+ I I+ + SLVL DE+GAGT+P EG AL MS+L+ + GSL+ +ATTH
Sbjct: 392 TFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEGAALAMSILDHVRKIGSLV-MATTH 450
Query: 577 HGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNAR 636
+ ELK Y+ + NA +EFD L PTYK+L GVPGRS+A +I+++LGL ++ A+
Sbjct: 451 YPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAFDISKKLGLSLNIINKAK 510
Query: 637 QLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQR 696
+ G EINE+I +ER + E + + +H +L + Q+
Sbjct: 511 TMIGTDEKEINEMIESLERNYKRVETQRLELDRLVKEAEQVHDDLSK---------QYQQ 561
Query: 697 FRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQ 756
F+ +K ++ K+ Q++ + +A ++ K +QLR + ++ +
Sbjct: 562 FQNYEK-----SLIEEAKEKANQKIKAATKEADDII-KDLRQLREQKGADVKEHELIDKK 615
Query: 757 HVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIK 816
L +++ K IKQ+ + ++ + GD V V S+G+KG V++
Sbjct: 616 KRLDDHYE-----------------AKSIKQNVQKQKYDKIVAGDEVKVLSYGQKGEVLE 658
Query: 817 VEPSKEEIVVQVGNMKWIMKFTDI 840
+ + EE +VQ+G +K + D+
Sbjct: 659 I-VNDEEAIVQMGIIKMKLPIEDL 681
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.130 0.363
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 277,301,515
Number of Sequences: 539616
Number of extensions: 10932114
Number of successful extensions: 40207
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 812
Number of HSP's successfully gapped in prelim test: 33
Number of HSP's that attempted gapping in prelim test: 37550
Number of HSP's gapped (non-prelim): 1350
length of query: 843
length of database: 191,569,459
effective HSP length: 126
effective length of query: 717
effective length of database: 123,577,843
effective search space: 88605313431
effective search space used: 88605313431
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 66 (30.0 bits)