Query 003164
Match_columns 843
No_of_seqs 180 out of 2335
Neff 10.1
Searched_HMMs 46136
Date Thu Mar 28 18:15:31 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/003164.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/003164hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0959 N-arginine dibasic con 100.0 1.4E-89 3.1E-94 767.1 77.2 825 1-843 127-966 (974)
2 COG1025 Ptr Secreted/periplasm 100.0 4.2E-88 9.2E-93 739.8 79.4 782 1-809 123-908 (937)
3 PRK15101 protease3; Provisiona 100.0 2.8E-87 6.2E-92 814.7 91.2 807 1-838 143-956 (961)
4 PTZ00432 falcilysin; Provision 100.0 1.8E-46 3.8E-51 448.4 49.5 772 1-816 191-1109(1119)
5 COG1026 Predicted Zn-dependent 100.0 5.5E-40 1.2E-44 362.8 46.0 771 1-825 118-972 (978)
6 KOG2019 Metalloendoprotease HM 100.0 3.1E-38 6.8E-43 328.4 48.1 762 1-811 150-986 (998)
7 TIGR02110 PQQ_syn_pqqF coenzym 100.0 6.2E-36 1.3E-40 335.0 50.1 572 1-715 99-695 (696)
8 COG0612 PqqL Predicted Zn-depe 100.0 4.2E-32 9.2E-37 301.1 34.0 405 394-815 17-436 (438)
9 COG0612 PqqL Predicted Zn-depe 100.0 9.4E-30 2E-34 282.3 22.0 308 1-325 115-432 (438)
10 TIGR02110 PQQ_syn_pqqF coenzym 99.9 4E-24 8.7E-29 240.3 31.2 328 397-739 3-348 (696)
11 KOG0960 Mitochondrial processi 99.9 2.3E-23 4.9E-28 205.5 30.3 404 395-820 35-459 (467)
12 PRK15101 protease3; Provisiona 99.9 8.4E-24 1.8E-28 258.3 32.6 400 393-812 43-464 (961)
13 KOG0961 Predicted Zn2+-depende 99.9 2.9E-21 6.4E-26 202.1 37.6 780 2-818 117-994 (1022)
14 KOG2067 Mitochondrial processi 99.9 3.4E-21 7.3E-26 190.5 28.2 396 396-815 27-449 (472)
15 KOG0960 Mitochondrial processi 99.9 4E-22 8.7E-27 196.7 18.7 300 1-323 131-448 (467)
16 PTZ00432 falcilysin; Provision 99.8 1.4E-18 3.1E-23 209.1 35.2 404 398-810 96-575 (1119)
17 PF05193 Peptidase_M16_C: Pept 99.8 3.7E-18 8E-23 166.4 17.2 176 73-257 2-183 (184)
18 PF05193 Peptidase_M16_C: Pept 99.7 5.2E-16 1.1E-20 151.2 16.6 175 551-737 1-184 (184)
19 KOG2067 Mitochondrial processi 99.6 1.1E-14 2.4E-19 144.8 17.2 291 2-316 123-436 (472)
20 COG1026 Predicted Zn-dependent 99.5 9.5E-12 2.1E-16 140.0 27.7 388 400-815 28-464 (978)
21 COG1025 Ptr Secreted/periplasm 99.5 2.4E-11 5.2E-16 136.2 30.4 402 395-812 25-443 (937)
22 KOG0959 N-arginine dibasic con 99.3 1.2E-09 2.7E-14 125.1 30.8 397 396-809 30-445 (974)
23 KOG2583 Ubiquinol cytochrome c 99.3 6.5E-09 1.4E-13 104.6 31.3 374 398-813 27-423 (429)
24 KOG2019 Metalloendoprotease HM 99.2 1.3E-08 2.9E-13 108.6 26.2 386 399-811 59-497 (998)
25 PF00675 Peptidase_M16: Insuli 98.6 2E-07 4.3E-12 86.8 10.5 135 404-540 1-141 (149)
26 KOG0961 Predicted Zn2+-depende 98.6 2.3E-06 4.9E-11 91.9 19.2 310 471-794 97-445 (1022)
27 KOG2583 Ubiquinol cytochrome c 97.8 0.0036 7.8E-08 64.1 20.8 285 2-322 121-418 (429)
28 PF00675 Peptidase_M16: Insuli 97.4 5.7E-05 1.2E-09 70.2 1.6 60 1-60 89-148 (149)
29 PF08367 M16C_assoc: Peptidase 96.9 0.0035 7.6E-08 63.5 8.2 122 394-519 70-209 (248)
30 PHA03081 putative metalloprote 51.7 1.9E+02 0.0042 31.6 11.4 184 397-598 2-193 (595)
31 PF03410 Peptidase_M44: Protei 40.8 5.4E+02 0.012 28.4 14.5 183 397-598 2-193 (590)
32 PF09851 SHOCT: Short C-termin 39.6 49 0.0011 20.9 3.2 16 723-738 15-30 (31)
33 PRK11512 DNA-binding transcrip 37.0 1.5E+02 0.0033 26.7 7.5 66 182-258 74-139 (144)
34 PF05120 GvpG: Gas vesicle pro 30.2 1.6E+02 0.0035 23.6 5.4 39 702-742 28-66 (79)
35 PRK03573 transcriptional regul 30.2 2.4E+02 0.0051 25.5 7.6 65 182-258 66-130 (144)
36 PRK10870 transcriptional repre 28.8 2.5E+02 0.0055 26.5 7.7 65 182-258 91-155 (176)
37 KOG1387 Glycosyltransferase [C 21.5 1.5E+02 0.0033 31.0 4.8 51 51-113 50-102 (465)
No 1
>KOG0959 consensus N-arginine dibasic convertase NRD1 and related Zn2+-dependent endopeptidases, insulinase superfamily [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.4e-89 Score=767.13 Aligned_cols=825 Identities=40% Similarity=0.670 Sum_probs=739.6
Q ss_pred ChhhhcchhccCCcchHHHHHHhhHhHhhhhcCChHHHHHHHHHhhCCCCCCCCccccCcHhhhhhhhhcCccHHHHHHH
Q 003164 1 MRFSQFFISPLMKVEAMEREVLAVDSEFNQALQNDACRLQQLQCHTSQLGHAFNKFFWGNKKSLIGAMEKGINLQEQIMK 80 (843)
Q Consensus 1 ~~~~~~~~~p~~~~~~i~~Er~vV~~E~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~G~~~~l~~~~~~~~~~~~~l~~ 80 (843)
|||++||.+|+|+++.++|||++|++|++++.+++.||.+++++.++.|+|||+||++||.+||...-+++ .+++.|++
T Consensus 127 DrFaqFf~~Plf~~~a~eREv~AVdSE~~~nl~~D~wr~~ql~~~l~~~~hp~~kF~tGN~~tL~~~p~~~-~~r~~L~k 205 (974)
T KOG0959|consen 127 DRFAQFFSDPLFNKSATEREVGAVDSEHEKNLNSDGWRFDQLLRSLSNPGHPYSKFSTGNKKTLLEGPREI-DLRDELLK 205 (974)
T ss_pred HHHHHHhhCcccChHHHHHHHHHHHHHHHhccCcchhHHHHHHHHhcCCCCcchhccccchhhhhhccccc-hHHHHHHH
Confidence 79999999999999999999999999999999999999999999999999999999999999999952222 46999999
Q ss_pred HHHhccCccccEEEEecCCCHHHHHHHHHHhcccccCCCCCCCCCCccccccc--ccceEEEEEccCceEEEEEEecCCc
Q 003164 81 LYMNYYQGGLMKLVVIGGEPLDTLQSWVVELFANVRKGPQIKPQFTVEGTIWK--ACKLFRLEAVKDVHILDLTWTLPCL 158 (843)
Q Consensus 81 fy~~~Y~p~nm~lvi~Gd~~~~~~~~~i~~~F~~~~~~~~~~~~~~~~~p~~~--~~~~~~~~~~~~~~~l~l~~~~p~~ 158 (843)
||++||+++||+|||+|+.+++.++.++.+.|+.++++..+.|.++.. |+.. .++.+.++|.++...+.+.|++|+.
T Consensus 206 F~k~~Yssn~M~l~i~G~eslD~Le~lv~~~F~~i~N~~~~~p~f~~~-p~~~e~~~~~~~v~pik~~~~l~is~~~p~~ 284 (974)
T KOG0959|consen 206 FYKNWYSSNIMTLVIVGKESLDVLESLVTRLFDEISNKKKPRPVFPEP-PFLPEELKKLVRVVPIKDGRSLMISWPVPPL 284 (974)
T ss_pred HHHhhcccccceEEEEcCCChhHHHHHHHHHcccccccCCCCCcccCC-CCChHHhCcEEEEEeccccceEEEEEecCCc
Confidence 999999999999999999999999999999999999988777777643 5542 4677888998899999999999998
Q ss_pred hhhhhcCcHHHHHHhhcCCCCCcHHHHHhhcCcccccccccCCCCCccCCceeEEEEEEEcCHhhHHhHHHHHHHHHHHH
Q 003164 159 HQEYLKKSEDYLAHLLGHEGRGSLHSFLKGRGWATSISAGVGDEGMHRSSIAYIFVMSIHLTDSGLEKIFDIIGFVYQYI 238 (843)
Q Consensus 159 ~~~~~~~~~~~l~~ll~~~~~~sL~~~L~~~~l~~~~~~~~~~~~~~~~~~~~~f~i~~~l~~~~~~~~~~~~~~l~~~l 238 (843)
.+.|+..|..++++|+|++++|||++.|+.+||+.++.++... .+++++.|.|.+.|++.|.+++++++..+++++
T Consensus 285 ~~~y~~kP~~y~~hLigheg~GSL~~~Lk~~gw~~sl~a~~~~----~as~~~~f~v~idLtd~G~e~~~~ii~~~f~yi 360 (974)
T KOG0959|consen 285 NHHYKSKPLRYLSHLIGHEGPGSLLSYLKRLGWATSLEAGIPE----FASGYSFFNVSIDLTDEGLEHVDEIIGLVFNYI 360 (974)
T ss_pred ccccccCcHHHHHHHhccCCcchHHHHHHHhhchheeecCCCc----cccccceEEEEEEeccccchhHHHHHHHHHHHH
Confidence 8889999999999999999999999999999999999998773 246789999999999999999999999999999
Q ss_pred HHHHhcCCchhHHHHHHHhhhcccccCCCCChHHHHHHHHHhCCCCCccceeecCcccccCCHHHHHHHHhccCcCceEE
Q 003164 239 KLLRQVSPQKWIFKELQDIGNMEFRFAEEQPQDDYAAELAGNLLIYPAEHVIYGEYMYEVWDEEMIKHLLGFFMPENMRI 318 (843)
Q Consensus 239 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~l~~~~~~~ 318 (843)
..++..|..++.++|...+....|+++....+.+++..++.++..+|+.+++.+.+++.+++++.|+.++..|.|.|+++
T Consensus 361 ~~l~~~~~~~~i~~E~~~~~~~~Frf~~k~~p~~~~~~~~~nlq~~P~~~il~~~~ll~~~~p~~i~~~~~~L~p~n~~v 440 (974)
T KOG0959|consen 361 KLLQSAGPEKWIFKELQLISEVKFRFQDKEPPMEYASEIASNLQYYPVEDVLTGSYLLTEFDPDLIQEVLSSLVPSNMRV 440 (974)
T ss_pred HHHHhcCchhHHHHHHHHhhhhheeecccCCcHHHHHHHHhhcccCChHHhhcchhhhhhcChHHHHHHHHhcCccccee
Confidence 99999999999999999999999999988889999999999999999999999999999999999999999999999999
Q ss_pred EEEeCCCCCCCCCcccceeecccccccCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccccccCCCCCcCCCCCeEEe
Q 003164 319 DVVSKSFAKSQDFHYEPWFGSRYTEEDISPSLMELWRNPPEIDVSLQLPSQNEFIPTDFSIRANDISNDLVTVTSPTCII 398 (843)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~y~~~~i~~~~~~~~~~~~~~~~~~~lp~~~~~i~~~~~~~~~~~~~~~~~~~~p~~~~ 398 (843)
++.+..+.. .....++|||+.|...++|++.++.|.+ ....+.+.+|.+|.|||++|++.+...+ ....|.++.
T Consensus 441 ~~~s~~~~~-~~d~~E~~ygt~y~~e~i~~~~~~~~~~-~~~~~~l~lP~~nefI~t~f~~~~~~~~----~~~~P~Li~ 514 (974)
T KOG0959|consen 441 ILVSRSFEG-KTDKAEPWYGTAYKVEDIPAEIIKEWEN-SHLNPELHLPTPNEFIPTDFSILPAPIP----KLEYPVLIS 514 (974)
T ss_pred eeeeecccc-ccccccceeccccccccCCHHHHHHhhc-cCccccccCCCCCcccccccccccccCc----cccCCeeee
Confidence 988876633 3668899999999999999999999954 4556789999999999999998765321 335788899
Q ss_pred cCCCeEEEEecCCccCCcceeEEEEEecCCCCCCHHHHHHHHHHHHHHHHHHHHHhHHhhhcccEeEEEEecceeEEEEc
Q 003164 399 DEPLIRFWYKLDNTFKLPRANTYFRINLKGGYDNVKNCILTELFIHLLKDELNEIIYQASVAKLETSVSIFSDKLELKVY 478 (843)
Q Consensus 399 ~~ng~~v~~~~~~~~~~p~~~i~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 478 (843)
.....++||++|+.|..|++.+.+.+..++...++.+.+++.++..++.+.+.+..|.+..+|++++++....|+.+.++
T Consensus 515 ~~~~~~lw~k~dd~f~~Pka~~~~~~~~p~~~~~~~~~~l~~l~~~~l~d~l~E~~Y~A~~aGl~~~~~~s~~G~~~~v~ 594 (974)
T KOG0959|consen 515 DTPFSELWYKQDDKFNVPKAYTKFDFICPGATQSPLNSVLSTLYVRLLKDQLNEYLYPALLAGLTYSLSSSSKGVELRVS 594 (974)
T ss_pred cCCcceeEEecccccccchhheeeeecCcccccCHHHHHHHHHHHHHHHHHHhHHHHHHHhccceEEeeecCCceEEEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHhcCc-CChhhHHHHHHHHhhccCCCCHHHHHHHhccCCHHHH
Q 003164 479 GFNDKLPVLLSKILAIAKSFLPSDDRFKVIKEDVVRTLKNTN-MKPLSHSSYLRLQVLCQSFYDVDEKLSILHGLSLADL 557 (843)
Q Consensus 479 g~s~~~~~~l~ll~~~l~~p~~~~~~~~~~k~~~~~~l~~~~-~~p~~~~~~~~~~~l~~~~~~~~~~~~~l~~it~edl 557 (843)
|++++++.+++.+.+.+.+..+++++|+.+++.+.+.+++.. .+|..++.+....++.+..|+..+..+.++.++++++
T Consensus 595 Gfnekl~~ll~~~~~~~~~f~~~~~rf~iike~~~~~~~n~~~~~p~~~a~~~~~lll~~~~W~~~e~~~al~~~~le~~ 674 (974)
T KOG0959|consen 595 GFNEKLPLLLEKVVQMMANFELDEDRFEIIKELLKRELRNHAFDNPYQLANDYLLLLLEESIWSKEELLEALDDVTLEDL 674 (974)
T ss_pred ccCcccHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHhhhhhccHHHHHHHHHHHHhhccccchHHHHHHhhcccHHHH
Confidence 999999999999999999999999999999999999999954 5899999998888888899999999999999999999
Q ss_pred HHHHHHHHhhhceeeeeecCCCHHHHHHHHHHHHhhcCCC-----CCCccccccceeeecCCCCeEEEEeccCCCCCCCe
Q 003164 558 MAFIPELRSQLYIEGLCHGNLSQEEAIHISNIFKSIFSVQ-----PLPIEMRHQECVICLPSGANLVRNVSVKNKCETNS 632 (843)
Q Consensus 558 ~~~~~~~~~~~~~~~~i~Gdi~~~~~~~~~~~~~~~l~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 632 (843)
..|...++.+..++++|.||++.+++.++++.+...+... +.........+...+|.+..+++... .+....++
T Consensus 675 ~~F~~~~~~~~~~e~~i~GN~te~~A~~l~~~v~d~l~~~~~~~~p~~~~~~~~~~~~~lp~G~~~~~~~~-~n~~~~ns 753 (974)
T KOG0959|consen 675 ESFISEFLQPFHLELLIHGNLTEKEALQLLKSVLDILKSAAPNSRPLFRSEHLPRREIQLPNGDYYFYRHL-LNKTDDNS 753 (974)
T ss_pred HHHHHHHhhhhheEEEEecCcchHHHHHHHHHHHhhhhccCCCCccccccccCcccceeccCCceEEEEcc-cccCCCCc
Confidence 9999999999999999999999999999988888777221 11111123345677888877765444 46667899
Q ss_pred EEEEEEeeccccCcccHHHHHHHHHHHHHhChhHHHHHhhhccccEEEEeeeeeeCCeeEEEEEEeCCCCChhHHHHHHH
Q 003164 633 VIELYFQIEQEKGMELTRLKALIDLFDEILEEPFFNQLRTKEQLGYVVECSPRVTYRVFGFCFCIQSSKYNPIYLQERID 712 (843)
Q Consensus 633 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~s~l~~~LRek~gl~Y~v~~~~~~~~~~~~~~~~i~s~~~~~~~~~~~i~ 712 (843)
.+..++|+ +..+..+.+.+.++.+++...+|+.||+|.+|||.|+++.+...|..++.+.||+. .+++.++..|+
T Consensus 754 ~i~~~~Q~----~~~~~~~~~~~~L~~~li~ep~Fd~LRTkeqLGYiv~~~~r~~~G~~~~~i~Vqs~-~~~~~le~rIe 828 (974)
T KOG0959|consen 754 CIEVYYQI----GVQDTRDNAVLGLLEQLIKEPAFDQLRTKEQLGYIVSTGVRLNYGTVGLQITVQSE-KSVDYLEERIE 828 (974)
T ss_pred eEEEEEEc----ccchhHHHHHHHHHHHHhccchHHhhhhHHhhCeEeeeeeeeecCcceeEEEEccC-CCchHHHHHHH
Confidence 99999999 88899999999999999999999999999999999999999989989999999998 79999999999
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHhcCcccccccHHHHHHHhcCCHHHHHHHHHHhh
Q 003164 713 NFISGLDELLEGLDDESFENYRSGLMAKLLEKDPSLTYESNRFWNQITDKRYMFDQSQKEAEDLKSIKKNDVISWYKTYL 792 (843)
Q Consensus 713 ~~~~~~~~~l~~ite~el~~~k~~l~~~~~~~~~s~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~it~edi~~~a~~~l 792 (843)
.|++.+.+.+..|++++|+.-+.+++......+.++..+...+|..|..+.|.|+..+..++.++.||++|+..++..++
T Consensus 829 ~fl~~~~~~i~~m~~e~Fe~~~~~lI~~~~ek~~~l~~e~~~~w~ei~~~~y~f~r~~~~v~~l~~i~k~~~i~~f~~~~ 908 (974)
T KOG0959|consen 829 SFLETFLEEIVEMSDEEFEKHKSGLIASKLEKPKNLSEESSRYWDEIIIGQYNFDRDEKEVEALKKITKEDVINFFDEYI 908 (974)
T ss_pred HHHHHHHHHHHhcchhhhhhhHHHHHHHHhhcCcchhHHHHHHHHHHHhhhhcchhhHHHHHHHHhhhHHHHHHHHHhhc
Confidence 99999999899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCcceEEEEEecCCCCccc---ccccccC----cccccChHHHhccCcccccCC
Q 003164 793 QQWSPKCRRLAVRVWGCNTNIKE---SEKHSKS----ALVIKDLTAFKLSSEFYQSLC 843 (843)
Q Consensus 793 ~~~~~~~~~~~~~v~g~~~~~~~---~~~~~~~----~~~~~~~~~~~~~~~~~~~~~ 843 (843)
..+++.++++++.+.|+...-+. ..+...+ ...|+|+++||.....||..|
T Consensus 909 ~~~a~~~~~lsv~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~d~~~fk~~~~l~~~~~ 966 (974)
T KOG0959|consen 909 RKGAAKRKKLSVHVHGKQLDEEASSEKIKSQSENLLKIKEITDIVAFKRSLPLYPLVK 966 (974)
T ss_pred cccchhcceEEEEecCchhhhhhhcccchhhhhhcccccchHHHHHhhcccccccccc
Confidence 99888888999999996432221 1111111 122889999999999998765
No 2
>COG1025 Ptr Secreted/periplasmic Zn-dependent peptidases, insulinase-like [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=4.2e-88 Score=739.80 Aligned_cols=782 Identities=29% Similarity=0.490 Sum_probs=694.4
Q ss_pred ChhhhcchhccCCcchHHHHHHhhHhHhhhhcCChHHHHHHHHHhhCCCCCCCCccccCcHhhhhhhhhcCccHHHHHHH
Q 003164 1 MRFSQFFISPLMKVEAMEREVLAVDSEFNQALQNDACRLQQLQCHTSQLGHAFNKFFWGNKKSLIGAMEKGINLQEQIMK 80 (843)
Q Consensus 1 ~~~~~~~~~p~~~~~~i~~Er~vV~~E~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~G~~~~l~~~~~~~~~~~~~l~~ 80 (843)
|+|++||++|+|+++.++|||.+|.+|+.++.+++++|++++.+.+++|+||++||++||.+||.. ++|..++++|++
T Consensus 123 DrFa~ff~~PLf~~e~~dRE~~AV~sE~~~~~~~D~~R~~~~~~~~~np~HP~srFs~GN~~TL~~--~p~~~v~~el~e 200 (937)
T COG1025 123 DRFADFFIEPLFNKEALDRERNAVNSEFTMNLTSDGWRMYQVQALTANPGHPLSKFSTGNLETLSD--KPGLVVQQELKE 200 (937)
T ss_pred HHHHHHHhccccChHHHHHHHHHHHHHHhcCcCchHHHHHHHHHhhcCCCCCccccCCCChhhhcc--CCCchHHHHHHH
Confidence 799999999999999999999999999999999999999999999999999999999999999998 456688999999
Q ss_pred HHHhccCccccEEEEecCCCHHHHHHHHHHhcccccCCCCCCCCCCcccccc--cccceEEEEEccCceEEEEEEecCCc
Q 003164 81 LYMNYYQGGLMKLVVIGGEPLDTLQSWVVELFANVRKGPQIKPQFTVEGTIW--KACKLFRLEAVKDVHILDLTWTLPCL 158 (843)
Q Consensus 81 fy~~~Y~p~nm~lvi~Gd~~~~~~~~~i~~~F~~~~~~~~~~~~~~~~~p~~--~~~~~~~~~~~~~~~~l~l~~~~p~~ 158 (843)
||++||+|+||++||+|+.+++++.+|+.+.||.||++....|..+.+ |+. ..++++.+.|..+.+.|.+.|++++.
T Consensus 201 f~~~~YSa~~M~lviyg~q~ldeL~~~a~~~F~~Ipn~~~~~p~~p~p-~~~d~~t~~ii~i~p~~~~~~L~i~f~i~~~ 279 (937)
T COG1025 201 FHEKHYSANNMKLVIYGNQPLDELAKLAADLFGDIPNRARKIPPIPVP-VVTDEQTGKIIHIVPAKPRPRLRIYFPIDDN 279 (937)
T ss_pred HHHHhcChhheEEEEecCCCHHHHHHHHHHHhCcCCCCCCCCCCCCCC-CCChHHhCceEEeccCCCCceEEEEEEcCCc
Confidence 999999999999999999999999999999999999877665554321 222 35678888888889999999999998
Q ss_pred hhhhhcCcHHHHHHhhcCCCCCcHHHHHhhcCcccccccccCCCCCccCCceeEEEEEEEcCHhhHHhHHHHHHHHHHHH
Q 003164 159 HQEYLKKSEDYLAHLLGHEGRGSLHSFLKGRGWATSISAGVGDEGMHRSSIAYIFVMSIHLTDSGLEKIFDIIGFVYQYI 238 (843)
Q Consensus 159 ~~~~~~~~~~~l~~ll~~~~~~sL~~~L~~~~l~~~~~~~~~~~~~~~~~~~~~f~i~~~l~~~~~~~~~~~~~~l~~~l 238 (843)
...++..+..++++|||++++|||...|+++||+++++++.... +.+.+.|.|.+.||++|.+++++|+..+|+++
T Consensus 280 ~~~~~~~~~~~~s~Lig~es~gsL~~~Lk~~Glit~l~a~~~~~----~~n~~~f~is~~LT~~Gl~~~~~VI~~~F~yl 355 (937)
T COG1025 280 SAKFRSKPDEYLSHLIGNESPGSLLAWLKKQGLITELSAGLDPI----SGNYGVFAISYELTDKGLAHYDRVIALTFQYL 355 (937)
T ss_pred ccccccCCHHHHHHHhccCCCchHHHHHHhccchhhhccccccc----cCCcceEEEEeehhhcchhhHHHHHHHHHHHH
Confidence 87788899999999999999999999999999999999987653 24678899999999999999999999999999
Q ss_pred HHHHhcCCchhHHHHHHHhhhcccccCCCCChHHHHHHHHHhCCCCCccceeecCcccccCCHHHHHHHHhccCcCceEE
Q 003164 239 KLLRQVSPQKWIFKELQDIGNMEFRFAEEQPQDDYAAELAGNLLIYPAEHVIYGEYMYEVWDEEMIKHLLGFFMPENMRI 318 (843)
Q Consensus 239 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~l~~~~~~~ 318 (843)
+.++.+|+..+.++|..++....|++.+...+.+++..++.+|..++++..+.....++.+++++++.++..++|+|+++
T Consensus 356 ~~l~~~~~~~~~f~Elq~v~~l~f~y~~~t~~~~~~~~l~~~m~~~p~~~~~~~~~~~~~yd~~~~~~~l~~~~pen~R~ 435 (937)
T COG1025 356 NLLREKGIPKYTFDELQNVLDLDFRYPSKTRPMDYVSWLADNMEREPVEHTLYASLVLPRYDPKAIQERLALMTPENARL 435 (937)
T ss_pred HHHHhccchhhHHHHHHHHHHhhhcccccCChHHHHHHHHHhcccCChhhhhchhhcccccCHHHHHHHHHhhCccceEE
Confidence 99999999999999999999999999988889999999999999889999888888999999999999998888999999
Q ss_pred EEEeCCCCCCCCCcccceeecccccccCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccccccCCCCCcCCCCCeEEe
Q 003164 319 DVVSKSFAKSQDFHYEPWFGSRYTEEDISPSLMELWRNPPEIDVSLQLPSQNEFIPTDFSIRANDISNDLVTVTSPTCII 398 (843)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~y~~~~i~~~~~~~~~~~~~~~~~~~lp~~~~~i~~~~~~~~~~~~~~~~~~~~p~~~~ 398 (843)
++.++... ..+.+.+++.+|.+.++..+.++.|+... ....+.+|..|+|||.++.+..... ....|.++.
T Consensus 436 ~lis~~~~---~~~~a~~~~~py~v~~~~~~~~~~~~~~~-~~~~l~lP~~N~fIp~~~~~~~~~~-----~~~~p~ll~ 506 (937)
T COG1025 436 WLISKLEE---HDKAAYFYGFPYQVDDYTAQPLDAWQQKA-DSIELSLPEPNPFIPDDVSLIKSEK-----KFTFPQLLS 506 (937)
T ss_pred EEecCCCC---ccccceeecCcceecchhhhhhhhhhccc-ccccccCCCCCCCCCcccccccccc-----CCCCchhhh
Confidence 99987642 24678889999999999988888897743 3445679999999999988854332 345688888
Q ss_pred cCCCeEEEEecCCccCC-cceeEEEEEecCCCCCCHHHHHHHHHHHHHHHHHHHHHhHHhhhcccEeEEEEecceeEEEE
Q 003164 399 DEPLIRFWYKLDNTFKL-PRANTYFRINLKGGYDNVKNCILTELFIHLLKDELNEIIYQASVAKLETSVSIFSDKLELKV 477 (843)
Q Consensus 399 ~~ng~~v~~~~~~~~~~-p~~~i~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 477 (843)
...|.++||++++.|.+ |++.+++.|++|....++++.++..+++.+.++.+.+..+++..+|+++++..+.+|+.+++
T Consensus 507 ~~~~~~~wy~~~d~F~~~PK~~v~~~irsp~~~~s~r~~Vl~~l~~~la~dal~~~~y~A~~aG~sfs~~~~~~Gl~lti 586 (937)
T COG1025 507 EDPNLRLWYLKEDYFAVEPKASVSLAIRSPHASRSPRNQVLTELYAYLANDALDKLSYQASLAGLSFSLAANSNGLDLTI 586 (937)
T ss_pred cCCCceEEEecCCccccCCcceeEEEEeCcccccCHHHHHHHHHHHHHHHHHHHhhhhHHHhcceEEEeecCCCceEEEe
Confidence 89999999999999988 99999999999999889999999999999999999999999999999999999999999999
Q ss_pred cccCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHhcCcC-ChhhHHHHHHHHhhccCCCCHHHHHHHhccCCHHH
Q 003164 478 YGFNDKLPVLLSKILAIAKSFLPSDDRFKVIKEDVVRTLKNTNM-KPLSHSSYLRLQVLCQSFYDVDEKLSILHGLSLAD 556 (843)
Q Consensus 478 ~g~s~~~~~~l~ll~~~l~~p~~~~~~~~~~k~~~~~~l~~~~~-~p~~~~~~~~~~~l~~~~~~~~~~~~~l~~it~ed 556 (843)
+|+++.++.++..+.+.+....++++.|..+|..+.+++++... +|..++...+..++..+.|+..+.++.+.+++.++
T Consensus 587 sGft~~lp~L~~~~l~~l~~~~~~~~~f~~~K~~~~~~~~~a~~~~p~~~~~~~l~~l~~~~~~s~~e~~~~l~~v~~~e 666 (937)
T COG1025 587 SGFTQRLPQLLRAFLDGLFSLPVDEDRFEQAKSQLSEELKNALTGKPYRQALDGLTGLLQVPYWSREERRNALESVSVEE 666 (937)
T ss_pred eccccchHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhhcCCHHHHHHHhhhhhCCCCcCHHHHHHHhhhccHHH
Confidence 99999999999999999999999999999999999999999876 89999999998888888999999999999999999
Q ss_pred HHHHHHHHHhhhceeeeeecCCCHHHHHHHHHHHHhhcCCCCCCccccccceeeecCCCCeEEEEeccCCCCCCCeEEEE
Q 003164 557 LMAFIPELRSQLYIEGLCHGNLSQEEAIHISNIFKSIFSVQPLPIEMRHQECVICLPSGANLVRNVSVKNKCETNSVIEL 636 (843)
Q Consensus 557 l~~~~~~~~~~~~~~~~i~Gdi~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 636 (843)
+..|...++++..++++|.||++.+++.++.+.....++..+. ..... +...++++....+......++..++++
T Consensus 667 ~~~f~~~l~~~~~lE~lv~Gn~~~~da~~l~~~~~~~l~~~~s--~~~~~-~~~~~~~~~~~~~e~~~~~~~~an~~i-- 741 (937)
T COG1025 667 FAAFRDTLLNGVHLEMLVLGNLTEADATNLAETLQKKLPAIGS--TWYRN-PSVYLLKGGTRIFETVGGESDSANAAI-- 741 (937)
T ss_pred HHHHHHHhhhccceeeeeeccchHHHHHHHHHHHHhhhcccCC--cccCC-CceeccCCCeeEeeeccCCccccccee--
Confidence 9999999999999999999999999999999887777764322 11121 223344444433222222222233333
Q ss_pred EEeeccccCcccHHHHHHHHHHHHHhChhHHHHHhhhccccEEEEeeeeeeCCeeEEEEEEeCCCCChhHHHHHHHHHHH
Q 003164 637 YFQIEQEKGMELTRLKALIDLFDEILEEPFFNQLRTKEQLGYVVECSPRVTYRVFGFCFCIQSSKYNPIYLQERIDNFIS 716 (843)
Q Consensus 637 ~~~~~~~~~~~~~~~~~~~~ll~~~l~s~l~~~LRek~gl~Y~v~~~~~~~~~~~~~~~~i~s~~~~~~~~~~~i~~~~~ 716 (843)
++.. +..+.+..+...+++++++..+|++||+|+||||.|+++.+..++..++.|+|||....|+++.+.++.|++
T Consensus 742 ~~~~----~~~~~~~~a~s~Ll~~l~~~~ff~~LRTkeQLGY~Vfs~~~~v~~~~gi~f~vqS~~~~p~~L~~r~~~F~~ 817 (937)
T COG1025 742 LYPQ----QYDEIKSSALSSLLGQLIHPWFFDQLRTKEQLGYAVFSGPREVGRTPGIGFLVQSNSKSPSYLLERINAFLE 817 (937)
T ss_pred Eecc----ccchHHHHHHHHHHHHHHhHHhHHHhhhhhhcceEEEecceeecCccceEEEEeCCCCChHHHHHHHHHHHH
Confidence 4444 344788899999999999999999999999999999999999999999999999998888899999999999
Q ss_pred HHHHHHhcCCHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHhcCcccccccHHHHHHHhcCCHHHHHHHHHHhhccCC
Q 003164 717 GLDELLEGLDDESFENYRSGLMAKLLEKDPSLTYESNRFWNQITDKRYMFDQSQKEAEDLKSIKKNDVISWYKTYLQQWS 796 (843)
Q Consensus 717 ~~~~~l~~ite~el~~~k~~l~~~~~~~~~s~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~it~edi~~~a~~~l~~~~ 796 (843)
.+...+.+|++++|+..|..+++++.....++..++..+|..+..+.++|++++..++.++.+|++++.+++..++...
T Consensus 818 ~~~~~l~~ms~e~Fe~~k~alin~il~~~~nl~e~a~r~~~~~~~g~~~Fd~~ek~i~~vk~LT~~~l~~f~~~~l~~~- 896 (937)
T COG1025 818 TAEPELREMSEEDFEQIKKALINQILQPPQNLAEEASRLWKAFGRGNLDFDHREKKIEAVKTLTKQKLLDFFENALSYE- 896 (937)
T ss_pred HHHHHHHhCCHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHhccCCCCcCcHHHHHHHHHhcCHHHHHHHHHHhhccc-
Confidence 9988889999999999999999999999999999999999989999999999999999999999999999999999874
Q ss_pred CCcceEEEEEecC
Q 003164 797 PKCRRLAVRVWGC 809 (843)
Q Consensus 797 ~~~~~~~~~v~g~ 809 (843)
+..++.+.|.|+
T Consensus 897 -~g~~l~~~i~g~ 908 (937)
T COG1025 897 -QGSKLLSHIRGQ 908 (937)
T ss_pred -ccceeeeeeecc
Confidence 567999999994
No 3
>PRK15101 protease3; Provisional
Probab=100.00 E-value=2.8e-87 Score=814.65 Aligned_cols=807 Identities=24% Similarity=0.388 Sum_probs=678.6
Q ss_pred ChhhhcchhccCCcchHHHHHHhhHhHhhhhcCChHHHHHHHHHhhCCCCCCCCccccCcHhhhhhhhhcCccHHHHHHH
Q 003164 1 MRFSQFFISPLMKVEAMEREVLAVDSEFNQALQNDACRLQQLQCHTSQLGHAFNKFFWGNKKSLIGAMEKGINLQEQIMK 80 (843)
Q Consensus 1 ~~~~~~~~~p~~~~~~i~~Er~vV~~E~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~G~~~~l~~~~~~~~~~~~~l~~ 80 (843)
|+|+++|.+|+|+++++++||++|++|++++.++|.+++++.+...++++|||+++++|++++|.+. .+..++++|++
T Consensus 143 ~~~ad~~~~P~f~~~~~erE~~~v~~E~~~~~~~~~~~~~~~~~~~~~~~hp~~~~~~G~~etl~~~--~~~~~~~~L~~ 220 (961)
T PRK15101 143 DRLADAIAEPLLDPKNADRERNAVNAELTMARSRDGMRMAQVSAETINPAHPGSRFSGGNLETLSDK--PGSKLQDALVD 220 (961)
T ss_pred HHHHHHHhccCCCHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHhhCCCCCCcccCCCCCHHHhhcC--CchHHHHHHHH
Confidence 5899999999999999999999999999999999999999999989999999999999999999982 11127999999
Q ss_pred HHHhccCccccEEEEecCCCHHHHHHHHHHhcccccCCCCCCCCCCcccccc--cccceEEEEEccCceEEEEEEecCCc
Q 003164 81 LYMNYYQGGLMKLVVIGGEPLDTLQSWVVELFANVRKGPQIKPQFTVEGTIW--KACKLFRLEAVKDVHILDLTWTLPCL 158 (843)
Q Consensus 81 fy~~~Y~p~nm~lvi~Gd~~~~~~~~~i~~~F~~~~~~~~~~~~~~~~~p~~--~~~~~~~~~~~~~~~~l~l~~~~p~~ 158 (843)
||++||+|+||+|||+||+++++++++++++|++|+++..+.+....+ |+. ..+..+.+.|..+...+.+.|++|..
T Consensus 221 f~~~~Y~p~nm~lvv~G~~~~~~l~~~~~~~F~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~l~~~~p~~ 299 (961)
T PRK15101 221 FYQRYYSANLMKAVIYSNQPLPELAKLAADTFGRVPNKNASVPEITVP-VVTDAQKGIIIHYVPAQPRKVLRVEFRIDNN 299 (961)
T ss_pred HHHHhCcccceEEEEEcCCCHHHHHHHHHHHhccCCCCCCCCCCCCCC-CCCHHHcCeEEEEEECCCCcEEEEEEecCCc
Confidence 999999999999999999999999999999999998765433322111 111 12344445566677899999999976
Q ss_pred hhhhhcCcHHHHHHhhcCCCCCcHHHHHhhcCcccccccccCCCCCccCCceeEEEEEEEcCHhhHHhHHHHHHHHHHHH
Q 003164 159 HQEYLKKSEDYLAHLLGHEGRGSLHSFLKGRGWATSISAGVGDEGMHRSSIAYIFVMSIHLTDSGLEKIFDIIGFVYQYI 238 (843)
Q Consensus 159 ~~~~~~~~~~~l~~ll~~~~~~sL~~~L~~~~l~~~~~~~~~~~~~~~~~~~~~f~i~~~l~~~~~~~~~~~~~~l~~~l 238 (843)
...++..+..+++++|++++.|+|+++|+++||+++++++.... ...+.+.|.|.+.+++.|.++++++++.++++|
T Consensus 300 ~~~~~~~~~~~l~~ll~~~~~g~l~~~L~~~gla~~v~s~~~~~---~~~~~g~f~i~~~~~~~~~~~~~~v~~~i~~~i 376 (961)
T PRK15101 300 SAKFRSKTDEYISYLIGNRSPGTLSDWLQKQGLAEGISAGADPM---VDRNSGVFAISVSLTDKGLAQRDQVVAAIFSYL 376 (961)
T ss_pred HHHHhhCHHHHHHHHhcCCCCCcHHHHHHHcCccceeeeccccc---cCCCceEEEEEEEcChHHHHhHHHHHHHHHHHH
Confidence 55555568899999999999999999999999999998876532 113468899999999887778999999999999
Q ss_pred HHHHhcCCchhHHHHHHHhhhcccccCCCCChHHHHHHHHHhCCCCCccceeecCcccccCCHHHHHHHHhccCcCceEE
Q 003164 239 KLLRQVSPQKWIFKELQDIGNMEFRFAEEQPQDDYAAELAGNLLIYPAEHVIYGEYMYEVWDEEMIKHLLGFFMPENMRI 318 (843)
Q Consensus 239 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~l~~~~~~~ 318 (843)
+++++.|+++++++++++.....|.+.....+.+.+..++..+..+++++++.+.+.+.++|+++|++.+++|+|+|+.+
T Consensus 377 ~~l~~~g~~~~el~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~~~~l~~~n~~i 456 (961)
T PRK15101 377 NLLREKGIDKSYFDELAHVLDLDFRYPSITRDMDYIEWLADTMLRVPVEHTLDAPYIADRYDPKAIKARLAEMTPQNARI 456 (961)
T ss_pred HHHHhcCCcHHHHHHHHHHHhccccCCCCCChHHHHHHHHHHhhhCCHHHheeCchhhhcCCHHHHHHHHhhcCHhHEEE
Confidence 99999999999999999999988887766667788899999988889999999999999999999999998899999999
Q ss_pred EEEeCCCCCCCCCcccceeecccccccCCHHHHHhhcCCCCCCCCCCCCCCCCCCCCCcccccccCCCCCcCCCCCeEEe
Q 003164 319 DVVSKSFAKSQDFHYEPWFGSRYTEEDISPSLMELWRNPPEIDVSLQLPSQNEFIPTDFSIRANDISNDLVTVTSPTCII 398 (843)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~y~~~~i~~~~~~~~~~~~~~~~~~~lp~~~~~i~~~~~~~~~~~~~~~~~~~~p~~~~ 398 (843)
++++|++. ...+++||+.+|++.+|+++.++.|.. ....+.+.+|..|+|+|++|.+..... ....|+.|.
T Consensus 457 ~~~~~~~~---~~~~~~~~~~~Y~~~~i~~~~~~~~~~-~~~~~~l~lP~~n~fip~~~~~~~~~~-----~~~~p~~i~ 527 (961)
T PRK15101 457 WYISPQEP---HNKTAYFVDAPYQVDKISEQTFADWQQ-KAQNIALSLPELNPYIPDDFSLIKADK-----AYKHPELIV 527 (961)
T ss_pred EEEeCCCC---CCccccccCCcceeecCCHHHHHHHhc-CCCCccCCCCCCCCccCCCCeeccCCC-----CCCCCeEEE
Confidence 99999763 346789999999999999999999976 334556899999999999999876432 124689999
Q ss_pred cCCCeEEEEecCCcc-CCcceeEEEEEecCCCCCCHHHHHHHHHHHHHHHHHHHHHhHHhhhcccEeEEEEecceeEEEE
Q 003164 399 DEPLIRFWYKLDNTF-KLPRANTYFRINLKGGYDNVKNCILTELFIHLLKDELNEIIYQASVAKLETSVSIFSDKLELKV 477 (843)
Q Consensus 399 ~~ng~~v~~~~~~~~-~~p~~~i~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 477 (843)
.+||++||+++++.| .+|++.+.+.+.++....++.+.+++.|++.++...+.+..+.+..+|++++++ ..+|+.+++
T Consensus 528 ~~~g~~vw~~~d~~f~~~Pk~~i~~~~~~~~~~~~~~~~~l~~L~~~ll~~~l~e~~y~a~~aG~~~~~~-~~~g~~i~v 606 (961)
T PRK15101 528 DEPGLRVVYMPSQYFADEPKADISLVLRNPKAMDSARNQVLFALNDYLAGLALDQLSNQASVGGISFSTN-ANNGLMVNA 606 (961)
T ss_pred cCCCeEEEEeCCCccccCCCEEEEEEEeCCCccCCHHHHHHHHHHHHHHHHHHHHHhchHHhcCcEEEEc-cCCCEEEEE
Confidence 999999999999988 599999999999998888899999999999999999998889999999999999 789999999
Q ss_pred cccCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHhcCcC-ChhhHHHHHHHHhhccCCC-CHHHHHHHhccCCHH
Q 003164 478 YGFNDKLPVLLSKILAIAKSFLPSDDRFKVIKEDVVRTLKNTNM-KPLSHSSYLRLQVLCQSFY-DVDEKLSILHGLSLA 555 (843)
Q Consensus 478 ~g~s~~~~~~l~ll~~~l~~p~~~~~~~~~~k~~~~~~l~~~~~-~p~~~~~~~~~~~l~~~~~-~~~~~~~~l~~it~e 555 (843)
+|++++++.+++++.+.+.+|.+++++|+++|+.+++++++... .|...+...+.. +..++| ...++.+.|+++|++
T Consensus 607 ~g~s~~l~~ll~~l~d~l~~~~~~~~~fe~~k~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~py~~~~~~~~~l~~it~e 685 (961)
T PRK15101 607 NGYTQRLPQLLQALLEGYFSFTPTEEQLAQAKSWYREQLDSAEKGKAYEQAIMPAQM-LSQVPYFERDERRKLLPSITLK 685 (961)
T ss_pred EecChhHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHhhhcccCcHHHHHHHHHH-HhcCCCCCHHHHHHHHhcCCHH
Confidence 99999999999999999999999999999999999999998765 555555443332 233443 467789999999999
Q ss_pred HHHHHHHHHHhhhceeeeeecCCCHHHHHHHHHHHHhhcCCCCCCccccccceeeecCCCCeEEEEeccCCCCCCCeEEE
Q 003164 556 DLMAFIPELRSQLYIEGLCHGNLSQEEAIHISNIFKSIFSVQPLPIEMRHQECVICLPSGANLVRNVSVKNKCETNSVIE 635 (843)
Q Consensus 556 dl~~~~~~~~~~~~~~~~i~Gdi~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 635 (843)
|+++|++++|.+.+++++|+||++.+++.++++++++.++..+.. +...+...++++....+.. .. ....++.+.
T Consensus 686 dl~~f~~~~~~~~~~~~~v~GNi~~~ea~~l~~~~~~~l~~~~~~---~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~ 760 (961)
T PRK15101 686 DVLAYRDALLSGATPEFLVVGNLTEEQVTTLARDVQKQLGADGTE---WWRGKDVVVDKKQSVNFEK-AG-SSTDSALAA 760 (961)
T ss_pred HHHHHHHHHHHhceEEEEEEcCCCHHHHHHHHHHHHHHhccCCcc---cccccceEeCCCCeEEEec-CC-CCCCCeEEE
Confidence 999999999999999999999999999999999999888753211 1111112233322222222 11 123455555
Q ss_pred EEEeeccccCcccHHHHHHHHHHHHHhChhHHHHHhhhccccEEEEeeeeeeCCeeEEEEEEeCCCCChhHHHHHHHHHH
Q 003164 636 LYFQIEQEKGMELTRLKALIDLFDEILEEPFFNQLRTKEQLGYVVECSPRVTYRVFGFCFCIQSSKYNPIYLQERIDNFI 715 (843)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~~~~ll~~~l~s~l~~~LRek~gl~Y~v~~~~~~~~~~~~~~~~i~s~~~~~~~~~~~i~~~~ 715 (843)
.+++. |..+....+++.+|+++++++||++||||+||||+|+++.....+..++.+++|+.+++|+.++..|+.|+
T Consensus 761 ~~~~~----g~~~~~~~v~~~lLg~~~ssrlf~~LRtk~qLgY~V~s~~~~~~~~~~~~~~vqs~~~~~~~l~~~i~~f~ 836 (961)
T PRK15101 761 VYVPT----GYDEYQSSAYSSLLGQIIQPWFYNQLRTEEQLGYAVFAFPMSVGRQWGMGFLLQSNDKQPAYLWQRYQAFF 836 (961)
T ss_pred EEEeC----CCCCHHHHHHHHHHHHHHhHHHHHHHHHHhhhceEEEEEeeccCCeeeEEEEEECCCCCHHHHHHHHHHHH
Confidence 56666 76778889999999999999999999999999999999998888888888999998789999999999999
Q ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHhcCcccccccHHHHHHHhcCCHHHHHHHHHHh-hcc
Q 003164 716 SGLDELLEGLDDESFENYRSGLMAKLLEKDPSLTYESNRFWNQITDKRYMFDQSQKEAEDLKSIKKNDVISWYKTY-LQQ 794 (843)
Q Consensus 716 ~~~~~~l~~ite~el~~~k~~l~~~~~~~~~s~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~it~edi~~~a~~~-l~~ 794 (843)
+++.+.++++|++||+++|+++++++....+++.+++..+|..+..++++|+..++.++.|++||++||++++++| +.+
T Consensus 837 ~~~~~~l~~lt~eE~~~~k~~l~~~~~~~~~sl~~~a~~~~~~i~~~~~~fd~~~~~~~~i~~vT~edv~~~~~~~~~~~ 916 (961)
T PRK15101 837 PQAEAKLRAMKPEEFAQYQQALINQLLQAPQTLGEEASRLSKDFDRGNMRFDSRDKIIAQIKLLTPQKLADFFHQAVIEP 916 (961)
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCCCcChHHHHHHHHHcCCHHHHHHHHHHHhcCC
Confidence 9986667899999999999999999999999999999999999988888999999999999999999999999998 666
Q ss_pred CCCCcceEEEEEecCCC-CcccccccccCcccccChHHHhccCcc
Q 003164 795 WSPKCRRLAVRVWGCNT-NIKESEKHSKSALVIKDLTAFKLSSEF 838 (843)
Q Consensus 795 ~~~~~~~~~~~v~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 838 (843)
+ ..+++++|.|... .+...+ + .+...|+|+..||.+..+
T Consensus 917 ~---~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~ 956 (961)
T PRK15101 917 Q---GLAILSQISGSQNGKADYAH-P-KGWKTWENVSALQQTLPV 956 (961)
T ss_pred C---CCEEEEEeeccCcccccccc-c-cCCeeeCCHHHHhhcCcc
Confidence 4 4488899999865 232221 1 234569999999977654
No 4
>PTZ00432 falcilysin; Provisional
Probab=100.00 E-value=1.8e-46 Score=448.35 Aligned_cols=772 Identities=12% Similarity=0.038 Sum_probs=486.4
Q ss_pred ChhhhcchhccCCcchH-----------HHH--------------------HHhhHhHhhhhcCChHHHHHHHHHhhCCC
Q 003164 1 MRFSQFFISPLMKVEAM-----------ERE--------------------VLAVDSEFNQALQNDACRLQQLQCHTSQL 49 (843)
Q Consensus 1 ~~~~~~~~~p~~~~~~i-----------~~E--------------------r~vV~~E~~~~~~~~~~~~~~~~~~~~~~ 49 (843)
|+++|++.+|.|+++++ ++| ++||++|+++..++|.+++++.+...+|
T Consensus 191 dv~~d~v~~P~~~~~~~~f~qEgwh~E~~~~~~~~~~~~e~~~~~~~~l~~kgVV~~Emk~~~~~p~~~~~~~~~~~lf- 269 (1119)
T PTZ00432 191 DVYMDSVFQPNILEDKDIFKQEGWHYKVTKLKDDEKNADELGNVHDRHVSYSGIVYSEMKKRFSDPLSFGYSVIYQNLF- 269 (1119)
T ss_pred HHHHHHHhCcCcccccchhhhhhhhccccccccccccccccccccccccchhhHHHHHHHHhhCCHHHHHHHHHHHHHh-
Confidence 58999999999998863 332 8999999999999999999998877778
Q ss_pred CCCCCccccCcHhhhhhhhhcCccHHHHHHHHHHhccCccccEEEEecCCCHHHHHHHHHHhcccccCCCCCC----C-C
Q 003164 50 GHAFNKFFWGNKKSLIGAMEKGINLQEQIMKLYMNYYQGGLMKLVVIGGEPLDTLQSWVVELFANVRKGPQIK----P-Q 124 (843)
Q Consensus 50 ~~p~~~~~~G~~~~l~~~~~~~~~~~~~l~~fy~~~Y~p~nm~lvi~Gd~~~~~~~~~i~~~F~~~~~~~~~~----~-~ 124 (843)
+|||+++++|++++|.+ +++++|++||++||+|+||+|+|+||+|+++++++++++|+.++++.... + .
T Consensus 270 ~~pY~~~~~G~~~~I~~------lt~e~l~~Fh~~~Y~P~N~~l~v~Gdid~~~~l~~l~~~f~~~~~~~~~~~~~~~~~ 343 (1119)
T PTZ00432 270 SNVYKYDSGGDPKDIVE------LTYEELVEFYKTYYGPKTATVYFYGPNDVTERLEFVDNYLTKHPKTGQLSHTAYRED 343 (1119)
T ss_pred CCCCCCCCCCChHhhcc------CCHHHHHHHHHHhcCccceEEEEEcCCCHHHHHHHHHHHHhhccccccccccccccc
Confidence 99999999999999999 89999999999999999999999999999999999999999887542110 0 0
Q ss_pred CCcccc---cccccceEEE-EE--ccCceEEEEE-EecC-Cc----------hhhhhcCcHHHHHHhhcCCCCCcHHHHH
Q 003164 125 FTVEGT---IWKACKLFRL-EA--VKDVHILDLT-WTLP-CL----------HQEYLKKSEDYLAHLLGHEGRGSLHSFL 186 (843)
Q Consensus 125 ~~~~~p---~~~~~~~~~~-~~--~~~~~~l~l~-~~~p-~~----------~~~~~~~~~~~l~~ll~~~~~~sL~~~L 186 (843)
...+.| .....+.+.+ .+ ......+.+. |+++ .. .+..+..++.+|+++|++++.|+|++.|
T Consensus 344 ~~~~~~~~~~~~~~~~v~~~~~~~~~e~~~l~~~~w~~~p~~~~~~~~~~~~~d~~~~~AL~VLs~lLggg~sS~L~q~L 423 (1119)
T PTZ00432 344 ADENLLYEEYKDKPKHVKKKFSSHSEEEENLMSVSWLLNPKHNGSKDYDKSLIDPVDYLALLVLNYLLLGTPESVLYKAL 423 (1119)
T ss_pred ccccccccccccCCeEEEeccCCCccccccEEEEEEEcCCccccccccccccCCHHHHHHHHHHHHHHcCCCccHHHHHH
Confidence 000111 1112222221 11 1234556664 9884 21 1113446899999999999889999999
Q ss_pred hhcCccccccc-ccCCCCCccCCceeEEEEEEEcCHhh-----HHhHHHHHHHHHHHHHHHHhcCCchhHHHHHHHhhhc
Q 003164 187 KGRGWATSISA-GVGDEGMHRSSIAYIFVMSIHLTDSG-----LEKIFDIIGFVYQYIKLLRQVSPQKWIFKELQDIGNM 260 (843)
Q Consensus 187 ~~~~l~~~~~~-~~~~~~~~~~~~~~~f~i~~~l~~~~-----~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~~~~~~~~ 260 (843)
+++||++++.. +.. .....+.|.|.+...... ..+++++++.|+++|+++++.|+++++++.+++..+.
T Consensus 424 rE~GLa~svv~~~~~-----~~~~~~~f~I~l~g~~~~~~~~~~~~~~ev~~~I~~~L~~l~~eGi~~eele~a~~qlef 498 (1119)
T PTZ00432 424 IDSGLGKKVVGSGLD-----DYFKQSIFSIGLKGIKETNEKRKDKVHYTFEKVVLNALTKVVTEGFNKSAVEASLNNIEF 498 (1119)
T ss_pred HhcCCCcCCCcCccc-----CCCCceEEEEEEEcCChHhccchhhhHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHH
Confidence 99999998643 322 123567888777522211 1347899999999999999999999999987776655
Q ss_pred ccccCCCC---ChHHHHHHHHHhCCC-CCccceeecCcccccC------CHHHHHHHH-hccCcCceE-EEEEeCCC--C
Q 003164 261 EFRFAEEQ---PQDDYAAELAGNLLI-YPAEHVIYGEYMYEVW------DEEMIKHLL-GFFMPENMR-IDVVSKSF--A 326 (843)
Q Consensus 261 ~~~~~~~~---~~~~~~~~l~~~l~~-~~~~~~~~~~~~~~~~------~~~~i~~~l-~~l~~~~~~-~~~~~~~~--~ 326 (843)
.++..... ....++..++..+.+ .+|.+.+.....++.+ ++..++.++ ++|-.++.+ +++..|+. .
T Consensus 499 ~~rE~~~~~~p~gl~~~~~~~~~~~~g~dp~~~l~~~~~l~~lr~~~~~~~~y~e~Li~k~ll~N~h~~~v~~~p~~s~~ 578 (1119)
T PTZ00432 499 VMKELNLGTYPKGLMLIFLMQSRLQYGKDPFEILRFEKLLNELKLRIDNESKYLEKLIEKHLLNNNHRVTVHLEAVESSK 578 (1119)
T ss_pred HhhhccCCCCCcHHHHHHHHHHHHhcCCCHHHHHhhHHHHHHHHHHHhcccHHHHHHHHHHccCCCeeeEEEEecCCccc
Confidence 54422211 135677777777764 6777766554433322 235677888 566444433 33344543 1
Q ss_pred --CCCCCcccceeecccccccCCHHHH----------HhhcCCCCCCCCC-CCCCCCCC-CCCCcccccccC---CCCCc
Q 003164 327 --KSQDFHYEPWFGSRYTEEDISPSLM----------ELWRNPPEIDVSL-QLPSQNEF-IPTDFSIRANDI---SNDLV 389 (843)
Q Consensus 327 --~~~~~~~~~~~~~~y~~~~i~~~~~----------~~~~~~~~~~~~~-~lp~~~~~-i~~~~~~~~~~~---~~~~~ 389 (843)
+......... ..-....++++.+ ++||...+++..+ .+|....- |+......+... ....
T Consensus 579 ~~~~~~~~e~~~--L~~~~~~Ls~ee~~~i~~~~~~l~~~q~~~~~~e~l~~lP~l~~~DI~~~~~~~~~~~~~~~~~~- 655 (1119)
T PTZ00432 579 YEKEFNKLVKDE--LKERLSHLTKEQVDEMEKAYEKFKKEREADDDPEHLDSFPILSLSDLNKETEEIPTKLYKLSSDS- 655 (1119)
T ss_pred HHHHHHHHHHHH--HHHHHHhCCHHHHHHHHHHHHHHHHHhcCCCChhHHhhcCCCcHHHcCCcccCCcchhhhccccc-
Confidence 1000000000 0001122333322 3344321111001 12221110 111100000000 0000
Q ss_pred CCCCCeEEecCCCeEEEEecCCccCCcceeEEEEEecCCCCCCHHHHHHHHHHHHHHHHHHH------H--HhHHhhhcc
Q 003164 390 TVTSPTCIIDEPLIRFWYKLDNTFKLPRANTYFRINLKGGYDNVKNCILTELFIHLLKDELN------E--IIYQASVAK 461 (843)
Q Consensus 390 ~~~~p~~~~~~ng~~v~~~~~~~~~~p~~~i~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~------~--~~~~~~~~g 461 (843)
.......-...+|+.+++++-.+ .+.+++.+.++....+.+...++.|++.+++...+ + .......+|
T Consensus 656 ~~~~~~~~~~~~~~~~~~~~~~T----nGi~y~~~~fdl~~l~~e~~~yl~L~~~~l~~~gT~~~s~~el~~~i~~~tGg 731 (1119)
T PTZ00432 656 LKENMDLDSDGGSVTVLVHPIES----RGILYLDFAFSLDSLTVDELKYLNLFKALLKENGTDKLSSEEFTYKREKNLGG 731 (1119)
T ss_pred ccccccccccCCCcceEEEecCC----CCeEEEEEEecCCCCCHHHHhhHHHHHHHHHhcCCCCCCHHHHHHHHHHhCCC
Confidence 00000001235688899886554 35788877777666677888999999999875321 1 112334667
Q ss_pred cEeEEEEec--------------ceeEEEEcccCCCHHHHHHHHHHHHhcCCCCHH-HHHHHHHHHHHHHhcCcC-Chhh
Q 003164 462 LETSVSIFS--------------DKLELKVYGFNDKLPVLLSKILAIAKSFLPSDD-RFKVIKEDVVRTLKNTNM-KPLS 525 (843)
Q Consensus 462 ~~~~~~~~~--------------~~~~~~~~g~s~~~~~~l~ll~~~l~~p~~~~~-~~~~~k~~~~~~l~~~~~-~p~~ 525 (843)
+++++.... ..+.++++++.++++.+++++.+++.++.|+.. ++..+.++.+..+++... ++..
T Consensus 732 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~l~~~~~~~~~l~~eil~~~~f~d~~rl~~il~~~~~~~~~~~~~~Gh~ 811 (1119)
T PTZ00432 732 LSASTAFYSETNNLTYDDPYNGVGYLNVRAKVLKHKVNEMVDIVLEALKDADFSNSKKGVEILKRKINGMKTVFSSKGHK 811 (1119)
T ss_pred eEEEEEEeccccccccCcccccceEEEEEEEEhhhhHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHHHHhhhhhHHH
Confidence 776654432 268999999999999999999999999999864 477777777777776554 5555
Q ss_pred HHHHHHHHhhccC-----CCC---HHHHHHHh---------ccCCHHHHHHHHHHHHhhhceeeeeecCCCH-HHHHHHH
Q 003164 526 HSSYLRLQVLCQS-----FYD---VDEKLSIL---------HGLSLADLMAFIPELRSQLYIEGLCHGNLSQ-EEAIHIS 587 (843)
Q Consensus 526 ~~~~~~~~~l~~~-----~~~---~~~~~~~l---------~~it~edl~~~~~~~~~~~~~~~~i~Gdi~~-~~~~~~~ 587 (843)
.|...+..-+... .+. ....+..+ ..+ .+.|...++++++..++.+.|+||.+. +.+.+.+
T Consensus 812 ~A~~~~~s~~S~~~~~~e~~~G~~~~~fl~~l~~~~~e~~~~~v-~~~L~~i~~~i~~~~~l~~~vt~~~~~~~~~~~~~ 890 (1119)
T PTZ00432 812 FALKRMKSKFSVSDYADELVNGYSQLLFLKETLVPLAEKDWSKV-ESKLNEIRNKLLSMKNLTVNVTGDSELLDSLLDDS 890 (1119)
T ss_pred HHHHHHHhcCCHHHHHHHHhcCHHHHHHHHHHHHHHhhhhHHHH-HHHHHHHHHHHhCcCCcEEEEEeCHHHHHHHHHHH
Confidence 5554443322211 011 11111211 111 355777788888999999999998744 3455656
Q ss_pred HHHHhhcCCC----C--CCccccccceeee---cC-CCCeEEEEeccCCCCCCCeEEEEEEeeccccCcccHHHHHHHHH
Q 003164 588 NIFKSIFSVQ----P--LPIEMRHQECVIC---LP-SGANLVRNVSVKNKCETNSVIELYFQIEQEKGMELTRLKALIDL 657 (843)
Q Consensus 588 ~~~~~~l~~~----~--~~~~~~~~~~~~~---~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 657 (843)
..+...++.. . .....+. ..... .+ ......+.+ |...+.+... ... -....+...++.|
T Consensus 891 ~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~e~~~~----p~~V~yv~~~-~~~----~~~~~~~~~~l~V 960 (1119)
T PTZ00432 891 TTFLKKLSSTFKENDNKSSDKVWV-KEVLDKKLMESVDKNEFIVL----PTRVNFVGMG-GKL----FDKSDKVDGSFQV 960 (1119)
T ss_pred HHHHHhcccccccccccccccccc-cccccccccCCcccceEEEc----cCceeEEEEe-ccc----ccCCCccCHHHHH
Confidence 6677766421 1 1100000 00000 01 001111111 1222222211 111 1123455778889
Q ss_pred HHHHhC-hhHHHHHhhhccccEEEEeeeeeeCCeeEEEEEEeCCCCChhHHHHHHHHHHHHHHHHHh---cCCHHHHHHH
Q 003164 658 FDEILE-EPFFNQLRTKEQLGYVVECSPRVTYRVFGFCFCIQSSKYNPIYLQERIDNFISGLDELLE---GLDDESFENY 733 (843)
Q Consensus 658 l~~~l~-s~l~~~LRek~gl~Y~v~~~~~~~~~~~~~~~~i~s~~~~~~~~~~~i~~~~~~~~~~l~---~ite~el~~~ 733 (843)
+..+|+ +.|+++||++ |++|++++.+.. . +.+.|+ |+ +|| ++.++++.|.+.+..+.+ .+|+++++++
T Consensus 961 l~~~L~~~yLw~~IR~~-GGAYG~~~~~~~-~--G~~~f~--SY-RDP-n~~~Tl~~f~~~~~~l~~~~~~~~~~~l~~~ 1032 (1119)
T PTZ00432 961 IVHYLKNSYLWKTVRMS-LGAYGVFADLLY-T--GHVIFM--SY-ADP-NFEKTLEVYKEVASALREAAETLTDKDLLRY 1032 (1119)
T ss_pred HHHHHccccchHHHccc-CCccccCCccCC-C--CeEEEE--Ee-cCC-CHHHHHHHHHHHHHHHHhcCCCCCHHHHHHH
Confidence 999885 7899999996 889999977653 2 223333 55 477 577899988887766554 4999999999
Q ss_pred HHHHHHHHcCCCCChHHHHHHHHHHHhcCcccccccHHHHHHHhcCCHHHHHHHHHHhhccCCCCcceEEEEEecCCCCc
Q 003164 734 RSGLMAKLLEKDPSLTYESNRFWNQITDKRYMFDQSQKEAEDLKSIKKNDVISWYKTYLQQWSPKCRRLAVRVWGCNTNI 813 (843)
Q Consensus 734 k~~l~~~~~~~~~s~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~it~edi~~~a~~~l~~~~~~~~~~~~~v~g~~~~~ 813 (843)
+-+.++++.. +.++..++...+...+.+. ..+.++.+++.|-++|++||+++|++|.... ..-.++|+|..++|
T Consensus 1033 iig~~~~~D~-p~~p~~~g~~~~~~~l~g~-t~e~rq~~R~~il~~t~edi~~~a~~~~~~~----~~~~~~v~g~~~~~ 1106 (1119)
T PTZ00432 1033 KIGKISNIDK-PLHVDELSKLALLRIIRNE-SDEDRQKFRKDILETTKEDFYRLADLMEKSK----EWEKVIAVVNSKTS 1106 (1119)
T ss_pred HHHHHhccCC-CCChHHHHHHHHHHHHcCC-CHHHHHHHHHHHHcCCHHHHHHHHHHHHhhh----ccCeEEEEECHHHh
Confidence 9999999976 6777777776666566543 5677788999999999999999999999753 35789999998888
Q ss_pred ccc
Q 003164 814 KES 816 (843)
Q Consensus 814 ~~~ 816 (843)
++.
T Consensus 1107 ~~~ 1109 (1119)
T PTZ00432 1107 DTA 1109 (1119)
T ss_pred hhc
Confidence 776
No 5
>COG1026 Predicted Zn-dependent peptidases, insulinase-like [General function prediction only]
Probab=100.00 E-value=5.5e-40 Score=362.83 Aligned_cols=771 Identities=15% Similarity=0.111 Sum_probs=480.0
Q ss_pred ChhhhcchhccCCcchHHHH--------------HHhhHhHhhhhcCChHHHHHHHHHhhCCCCCCCCccccCcHhhhhh
Q 003164 1 MRFSQFFISPLMKVEAMERE--------------VLAVDSEFNQALQNDACRLQQLQCHTSQLGHAFNKFFWGNKKSLIG 66 (843)
Q Consensus 1 ~~~~~~~~~p~~~~~~i~~E--------------r~vV~~E~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~G~~~~l~~ 66 (843)
++++|.+.+|+++++.+.+| .|||.+||++...++..+++..++...||+.-|+..+.|.+..|..
T Consensus 118 ~VYlDavf~PlL~~e~F~QEgwr~e~~~~~~l~~~GVVyNEMKGa~ss~~~~~~~~~~~slfp~~ty~~~SGG~P~~I~~ 197 (978)
T COG1026 118 SVYLDAVFHPLLTKESFLQEGWRIEFKDESNLKYKGVVYNEMKGAYSSGESVLSRAMQQSLFPGTTYGVNSGGDPKNIPD 197 (978)
T ss_pred HHHHHhhhCcccchHHHhhhhhccccCCCccceeeeEEeehhcccccCchhHHHHHHHHhhCCCccccccCCCCcccccc
Confidence 47899999999999999988 4699999999999999999999999999999999999999999999
Q ss_pred hhhcCccHHHHHHHHHHhccCccccEEEEecCCCHHHHHHHHHHh-cccccCCCCCCCCCCcccccccccceE---EEE-
Q 003164 67 AMEKGINLQEQIMKLYMNYYQGGLMKLVVIGGEPLDTLQSWVVEL-FANVRKGPQIKPQFTVEGTIWKACKLF---RLE- 141 (843)
Q Consensus 67 ~~~~~~~~~~~l~~fy~~~Y~p~nm~lvi~Gd~~~~~~~~~i~~~-F~~~~~~~~~~~~~~~~~p~~~~~~~~---~~~- 141 (843)
.+++++++||+++|||+|++++++||++++++.+.+++. +...++... ..+.+...++....+.. .+.
T Consensus 198 ------LtyE~~r~FHkk~Y~pSN~~i~~yGni~~~~~L~~iee~~l~~~~k~~~-~~~i~~~~~~~~~~~~~~~ypi~~ 270 (978)
T COG1026 198 ------LTYEEFRAFHKKHYHPSNCKIFVYGNIPTERLLDFIEEKVLRPFGKREL-DVPIPDQKAFKKPRRKVLEYPISF 270 (978)
T ss_pred ------cCHHHHHHHHHHhCCccceEEEEECCCCHHHHHHHHHHhhhcccccccc-CCCCCcccccCcccccceeeccCC
Confidence 999999999999999999999999999999999999986 666654432 11111111221111111 111
Q ss_pred --EccCceEEEEEEecCCchhhhhcCcHHHHHHhhcCCCCCcHHHHHhhcCcc-cccccccCCCCCccCCceeEEEEEEE
Q 003164 142 --AVKDVHILDLTWTLPCLHQEYLKKSEDYLAHLLGHEGRGSLHSFLKGRGWA-TSISAGVGDEGMHRSSIAYIFVMSIH 218 (843)
Q Consensus 142 --~~~~~~~l~l~~~~p~~~~~~~~~~~~~l~~ll~~~~~~sL~~~L~~~~l~-~~~~~~~~~~~~~~~~~~~~f~i~~~ 218 (843)
...++..+.+.|..+...+.++..++.+|+++|.+...+.|.+.|.+.|+. ..++.. ++.......|.+.
T Consensus 271 ~~~de~q~~~~lsWl~~~~~d~~~~lal~vL~~iLl~~~asPl~~~liesglg~~~~~g~-----~~~~~~~~~f~v~-- 343 (978)
T COG1026 271 DEEDEDQGLLSLSWLGGSASDAEDSLALEVLEEILLDSAASPLTQALIESGLGFADVSGS-----YDSDLKETIFSVG-- 343 (978)
T ss_pred CCCCCceeEEEEEEecCCcccHHHHHHHHHHHHHHccCcccHHHHHHHHcCCCcccccce-----eccccceeEEEEE--
Confidence 123567889999999887777778999999999987777799999998887 222211 1111223455544
Q ss_pred cCHhhHHhHHHHHHHHHHHHHHHHhcCCchhHHHHHHHhhhcccccCCCCChH--HHHHHHHHhC-CCCCccceeecCcc
Q 003164 219 LTDSGLEKIFDIIGFVYQYIKLLRQVSPQKWIFKELQDIGNMEFRFAEEQPQD--DYAAELAGNL-LIYPAEHVIYGEYM 295 (843)
Q Consensus 219 l~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~l-~~~~~~~~~~~~~~ 295 (843)
++....++.+++.+.++..++.+.++|+.++.++.+.+..+...... ...+. .++......+ ...+|..-|.....
T Consensus 344 ~~gv~~ek~~~~k~lV~~~L~~l~~~gi~~~~ie~~~~q~E~s~ke~-~s~pfgl~l~~~~~~gw~~G~dp~~~Lr~~~~ 422 (978)
T COG1026 344 LKGVSEEKIAKLKNLVLSTLKELVKNGIDKKLIEAILHQLEFSLKEV-KSYPFGLGLMFRSLYGWLNGGDPEDSLRFLDY 422 (978)
T ss_pred ecCCCHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhhhhh-cCCCccHHHHHHhccccccCCChhhhhhhHHH
Confidence 44444578999999999999999999999999988777655443321 22222 2222222222 23455554543322
Q ss_pred cccCC----H-HHHHHHH-hccCcCc-eEEEEEeCCCCCCCC-Ccc-cceeecccccccCCHHHHHhhcCC------CCC
Q 003164 296 YEVWD----E-EMIKHLL-GFFMPEN-MRIDVVSKSFAKSQD-FHY-EPWFGSRYTEEDISPSLMELWRNP------PEI 360 (843)
Q Consensus 296 ~~~~~----~-~~i~~~l-~~l~~~~-~~~~~~~~~~~~~~~-~~~-~~~~~~~y~~~~i~~~~~~~~~~~------~~~ 360 (843)
+..+. . ..+++++ ++|-.++ ..++++.|+..-.+. .+. ..... . ....++++.++.+.+. .+.
T Consensus 423 ~~~Lr~~le~~~~fe~LI~ky~l~N~h~~~v~~~Ps~~~~~~~ekee~e~L~-~-~~~~l~de~~~ki~~~~~~lke~Q~ 500 (978)
T COG1026 423 LQNLREKLEKGPYFEKLIRKYFLDNPHYVTVIVLPSPELEEKLEKEERELLQ-K-RSSELTDEDLEKIIKDSKKLKERQD 500 (978)
T ss_pred HHHHHHhhhcChHHHHHHHHHhhcCCccEEEEEecChHHHHHHHHHHHHHHH-H-HHhhcCHHHHHHHHHHHHHHHHhhc
Confidence 22211 1 1477777 5664444 455556676521100 000 00000 0 0112333332222110 000
Q ss_pred CCCCCCC-CCCCCCCCCcccccccCCCCCcCCCCCeEEecCCCeEEEEecCCccCCcceeEEEEEecCCCCCCHHHHHHH
Q 003164 361 DVSLQLP-SQNEFIPTDFSIRANDISNDLVTVTSPTCIIDEPLIRFWYKLDNTFKLPRANTYFRINLKGGYDNVKNCILT 439 (843)
Q Consensus 361 ~~~~~lp-~~~~~i~~~~~~~~~~~~~~~~~~~~p~~~~~~ng~~v~~~~~~~~~~p~~~i~~~~~~~~~~~~~~~~~~~ 439 (843)
++ .| .-...+|. +.+.+.... ....+......+..+|.+++-.+ .+.+++++..+....+.....++
T Consensus 501 ~~---dse~~~~~lP~-l~~~dvp~~----~~k~~l~~~~~~~~~v~~~~~~t----n~i~yl~~~~~~~~l~~~llpyL 568 (978)
T COG1026 501 QP---DSEEDLATLPT-LKLGDVPDP----IEKTSLETEVSNEAKVLHHDLFT----NGITYLRLYFDLDMLPSELLPYL 568 (978)
T ss_pred CC---Cchhhhhhccc-cchhcCCCc----ccccceeeeccCCcceEEeecCC----CCeEEEEEEeecCCCChhhhhhH
Confidence 00 00 00111221 111111100 00112233456777888776432 45677777766656677788899
Q ss_pred HHHHHHHHHHHHH------Hh--HHhhhcccEeEEEEec---------ceeEEEEcccCCCHHHHHHHHHHHHhcCCC-C
Q 003164 440 ELFIHLLKDELNE------II--YQASVAKLETSVSIFS---------DKLELKVYGFNDKLPVLLSKILAIAKSFLP-S 501 (843)
Q Consensus 440 ~l~~~~l~~~~~~------~~--~~~~~~g~~~~~~~~~---------~~~~~~~~g~s~~~~~~l~ll~~~l~~p~~-~ 501 (843)
.+++.++....+. .. ...-.+|++++.++.. ..+.+.++++.++.+.+++++.+++.++.| |
T Consensus 569 ~L~~~~l~~lgt~~~~y~e~~~~i~~~TGgis~~~~~~~~~~~~~~~~~~~~i~~K~l~~k~~~~~~~i~~~l~~~~F~D 648 (978)
T COG1026 569 PLFAFALTNLGTETYSYKELLNQIERHTGGISVSLSVDTDPGDDGEYRPSFSISGKALRSKVEKLFELIREILANTDFHD 648 (978)
T ss_pred HHHHHHHHhcCCCCcCHHHHHHHHHHHhCCceeeEeeccCCCccccccceEEEEEEehhhhhhHHHHHHHHHHhcCCcCc
Confidence 9999988764321 11 1123557766665543 458888889999999999999999999999 7
Q ss_pred HHHHHHHHHHHHHHHhcCcC-ChhhHHHHHHHHhhccCC-----C---CHHHHHHHhc-----cCC---HHHHHHHHHHH
Q 003164 502 DDRFKVIKEDVVRTLKNTNM-KPLSHSSYLRLQVLCQSF-----Y---DVDEKLSILH-----GLS---LADLMAFIPEL 564 (843)
Q Consensus 502 ~~~~~~~k~~~~~~l~~~~~-~p~~~~~~~~~~~l~~~~-----~---~~~~~~~~l~-----~it---~edl~~~~~~~ 564 (843)
.+++..+.++.++.+..... ++...|......-++... + +....+..|. +.. .+.|++.++++
T Consensus 649 ~~Rlkell~q~~~~l~~~vr~sG~~~A~~~~~s~~~~~~~l~e~~~Gl~q~k~i~~l~~~~~~~~~~ei~~kL~~l~~~i 728 (978)
T COG1026 649 RERLKELLEQYLSDLTSSVRNSGHSIASSLANSRLSSAGALKELLNGLSQVKFLRELSSNFEENFEKEIADKLQALRKKI 728 (978)
T ss_pred HHHHHHHHHHHHhhhHHhhhccchHHHHHHhhcccccchhHHHHhcChhHHHHHHHHHHhhcccccHHHHHHHHHHHHHH
Confidence 78888888888887777655 366666555544333211 1 1111111111 111 35788888888
Q ss_pred HhhhceeeeeecCCCHHHHHHHH-HHHHhhcCCC-CC--CccccccceeeecCC--CCeEEEEeccCCCCCCCeEEEEEE
Q 003164 565 RSQLYIEGLCHGNLSQEEAIHIS-NIFKSIFSVQ-PL--PIEMRHQECVICLPS--GANLVRNVSVKNKCETNSVIELYF 638 (843)
Q Consensus 565 ~~~~~~~~~i~Gdi~~~~~~~~~-~~~~~~l~~~-~~--~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 638 (843)
+..+++.+++.|+++... +.+ +.+.+..+.. +. ...... .......+ ...++ ++. |.+-++. .+
T Consensus 729 ~~~~n~~i~i~~~~~~~~--~~~e~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i--i~~--p~a~~~l---~f 798 (978)
T COG1026 729 FQTNNLRIAIIGDIDKIL--DLLENPLLKFLEHLLPGFELPTPPK-NPHLDLISSLSEATI--IPS--PVAYNAL---AF 798 (978)
T ss_pred hhcCceEEEEecChhhhH--HHHHHHhhhhhcccCcccccCCCCC-CcchhhhccccceEE--ecc--HHHHHHH---hh
Confidence 988898899999886432 222 3344443210 00 000000 00111111 11111 211 1111111 23
Q ss_pred eeccccCcccHHHHHHHHHHHHHhC-hhHHHHHhhhccccEEEEeeeeeeCCeeEEEEEEeCCCCChhHHHHHHHHHHHH
Q 003164 639 QIEQEKGMELTRLKALIDLFDEILE-EPFFNQLRTKEQLGYVVECSPRVTYRVFGFCFCIQSSKYNPIYLQERIDNFISG 717 (843)
Q Consensus 639 ~~~~~~~~~~~~~~~~~~ll~~~l~-s~l~~~LRek~gl~Y~v~~~~~~~~~~~~~~~~i~s~~~~~~~~~~~i~~~~~~ 717 (843)
..+. .++.+++.+++.|+..+|+ ..|+.++|++ |++|+.++......|..+ |+ ++ +|| ++.+..+.+.+.
T Consensus 799 s~~~--~~y~hpd~~~l~vls~~L~~~~lw~~IR~~-GGAYGa~as~~~~~G~f~--f~--sY-RDP-n~~kt~~v~~~~ 869 (978)
T COG1026 799 SIGG--LPYTHPDYAALQVLSEYLGSGYLWNKIREK-GGAYGASASIDANRGVFS--FA--SY-RDP-NILKTYKVFRKS 869 (978)
T ss_pred hccC--CCCCCccchHHHHHHHHhccchhHHHHHhh-ccccccccccccCCCeEE--EE--ec-CCC-cHHHHHHHHHHH
Confidence 3310 3467888999999999996 5788999996 899999998775554433 33 54 477 466788888877
Q ss_pred HHHHH-hcCCHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHhcCcccccccHHHHHHHhcCCHHHHHHHHHHhhccCC
Q 003164 718 LDELL-EGLDDESFENYRSGLMAKLLEKDPSLTYESNRFWNQITDKRYMFDQSQKEAEDLKSIKKNDVISWYKTYLQQWS 796 (843)
Q Consensus 718 ~~~~l-~~ite~el~~~k~~l~~~~~~~~~s~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~it~edi~~~a~~~l~~~~ 796 (843)
+..+. ..++++|+++++-.+++.+.. ++++..++..-......+ ...+.++.++++|.++|++||.++.++|+.+-
T Consensus 870 v~~l~s~~~~~~d~~~~ilg~i~~~d~-p~sp~~~~~~s~~~~~sg-~~~~~~qa~re~~l~vt~~di~~~~~~yl~~~- 946 (978)
T COG1026 870 VKDLASGNFDERDLEEAILGIISTLDT-PESPASEGSKSFYRDLSG-LTDEERQAFRERLLDVTKEDIKEVMDKYLLNF- 946 (978)
T ss_pred HHHHHcCCCCHHHHHHHHHHhhccccc-ccCCcceehhhHHHHHhc-CCHHHHHHHHHHHhcCcHHHHHHHHHHHHhcc-
Confidence 76665 479999999999999999875 455555443322222222 23467778899999999999999999999863
Q ss_pred CCcceEEEEEecCCCCcccccccccCccc
Q 003164 797 PKCRRLAVRVWGCNTNIKESEKHSKSALV 825 (843)
Q Consensus 797 ~~~~~~~~~v~g~~~~~~~~~~~~~~~~~ 825 (843)
.+.-+++++|..+.+.|+.+. .|..|
T Consensus 947 --~~e~~i~~~~~~e~~~e~~~~-~g~~~ 972 (978)
T COG1026 947 --SSENSIAVFAGEEKPQENFET-LGFNV 972 (978)
T ss_pred --cccceEEEEechhhhhhhhhh-cCcce
Confidence 235677777776667777665 45554
No 6
>KOG2019 consensus Metalloendoprotease HMP1 (insulinase superfamily) [General function prediction only; Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=3.1e-38 Score=328.36 Aligned_cols=762 Identities=13% Similarity=0.032 Sum_probs=485.5
Q ss_pred ChhhhcchhccCCcchHHHHH------------------HhhHhHhhhhcCChHHHHHHHHHhhCCCCCCCCccccCcHh
Q 003164 1 MRFSQFFISPLMKVEAMEREV------------------LAVDSEFNQALQNDACRLQQLQCHTSQLGHAFNKFFWGNKK 62 (843)
Q Consensus 1 ~~~~~~~~~p~~~~~~i~~Er------------------~vV~~E~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~G~~~ 62 (843)
|++.|....|.+.+.++.+|- +||.+||++..+++.+.++...+..++|++.|+-.+.|++.
T Consensus 150 dVYLDAtffPklr~~dF~QEGWr~Eh~dpsd~~SpivfkGVVfNEMKG~~S~~~~if~~~~Qq~L~p~~tYgv~SGGDPl 229 (998)
T KOG2019|consen 150 DVYLDATFFPKLRKLDFQQEGWRLEHNDPSDPISPIVFKGVVFNEMKGQYSDPDYIFGMLFQQALFPENTYGVNSGGDPL 229 (998)
T ss_pred HHhhhcccchHHHhhhhhhhcceeecCCCCCCcccceeeeeeeecccccccChhHHHHHHHHHhhCccccccccCCCCcc
Confidence 456677778888888888874 59999999999999999999988899999999999999999
Q ss_pred hhhhhhhcCccHHHHHHHHHHhccCccccEEEEecCCCHHHHHHHHHHhcccccCCCCCCCCCCcccccccccceEEE-E
Q 003164 63 SLIGAMEKGINLQEQIMKLYMNYYQGGLMKLVVIGGEPLDTLQSWVVELFANVRKGPQIKPQFTVEGTIWKACKLFRL-E 141 (843)
Q Consensus 63 ~l~~~~~~~~~~~~~l~~fy~~~Y~p~nm~lvi~Gd~~~~~~~~~i~~~F~~~~~~~~~~~~~~~~~p~~~~~~~~~~-~ 141 (843)
.|.. .++++|++||++||||+|+.+..+||+.+++....+++-|++..+.....+... ..++. ..+.++. -
T Consensus 230 ~Ipd------Lt~eelk~FHr~~YHPSNAri~tYGn~Pl~~~l~~l~e~~~~~sk~~~s~kv~~-qk~f~-kp~rvve~~ 301 (998)
T KOG2019|consen 230 DIPD------LTYEELKEFHRQHYHPSNARIFTYGNFPLEDLLKQLEEDFSPFSKRELSSKVTF-QKLFD-KPRRVVEKG 301 (998)
T ss_pred cCcc------ccHHHHHHHHHhccCCCcceeEeecCchHHHHHHHHHHhhcccccccccCcccc-ccccc-cCceeeeec
Confidence 9999 999999999999999999999999999999999999988776654332221110 11332 2232222 1
Q ss_pred E-c-----cCceEEEEEEecCCchhhhhcCcHHHHHHhhcCCCCCcHHHHHhhcCcccccccccCCCCCccCCceeEEEE
Q 003164 142 A-V-----KDVHILDLTWTLPCLHQEYLKKSEDYLAHLLGHEGRGSLHSFLKGRGWATSISAGVGDEGMHRSSIAYIFVM 215 (843)
Q Consensus 142 ~-~-----~~~~~l~l~~~~p~~~~~~~~~~~~~l~~ll~~~~~~sL~~~L~~~~l~~~~~~~~~~~~~~~~~~~~~f~i 215 (843)
| + +.+...++.|..+...+-+...++.+|++|+.++..+.++..|.+.||-+.++...+. +.+...+.|+|
T Consensus 302 p~d~~~~p~Kq~~~s~s~L~~~p~d~~etfaL~~L~~Ll~~gpsSp~yk~LiESGLGtEfsvnsG~---~~~t~~~~fsV 378 (998)
T KOG2019|consen 302 PADPGDLPKKQTKCSNSFLSNDPLDTYETFALKVLSHLLLDGPSSPFYKALIESGLGTEFSVNSGY---EDTTLQPQFSV 378 (998)
T ss_pred CCCCCCCccceeEEEEEeecCCchhHHHHHHHHHHHHHhcCCCccHHHHHHHHcCCCcccccCCCC---Ccccccceeee
Confidence 1 1 1234566778778777767778999999999988888889999999999877766553 23345677877
Q ss_pred EEEcCHhhHHhHHHHHHHHHHHHHHHHhcCCchhHHHHHHHhhhcccccCCCCChHHHHHHHHHhCCC-CCccceeecCc
Q 003164 216 SIHLTDSGLEKIFDIIGFVYQYIKLLRQVSPQKWIFKELQDIGNMEFRFAEEQPQDDYAAELAGNLLI-YPAEHVIYGEY 294 (843)
Q Consensus 216 ~~~l~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~~~~~~~~~~~ 294 (843)
.++-. .+++++.+.+.|+..++.+...||..+.+++..+..+...+.++-.....++..+...+.+ .+|-+.+....
T Consensus 379 GLqGv--seediekve~lV~~t~~~lae~gfd~drieAil~qiEislk~qst~fGL~L~~~i~~~W~~d~DPfE~Lk~~~ 456 (998)
T KOG2019|consen 379 GLQGV--SEEDIEKVEELVMNTFNKLAETGFDNDRIEAILHQIEISLKHQSTGFGLSLMQSIISKWINDMDPFEPLKFEE 456 (998)
T ss_pred eeccc--cHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHhhhhhhccccchhHHHHHHHhhhhccCCCccchhhhhh
Confidence 66543 3468999999999999999999999988888777666655444333333555555555554 56656555433
Q ss_pred ccc-------cCCHHHHHHHH-hccCcCc-eEEEEEeCCC--CCCCCCcccceeecccccccCCHHHHHhhcCCCC-CCC
Q 003164 295 MYE-------VWDEEMIKHLL-GFFMPEN-MRIDVVSKSF--AKSQDFHYEPWFGSRYTEEDISPSLMELWRNPPE-IDV 362 (843)
Q Consensus 295 ~~~-------~~~~~~i~~~l-~~l~~~~-~~~~~~~~~~--~~~~~~~~~~~~~~~y~~~~i~~~~~~~~~~~~~-~~~ 362 (843)
.+. +-....++.++ +|+..+. ..++-.-|+. .+.+ ...++. ..+-.+..+++++++.+..... ...
T Consensus 457 ~L~~lk~~l~ek~~~lfq~lIkkYilnn~h~~t~smqpd~e~~~~~-~~eE~t-kL~ek~~alteeD~~ei~k~~~eL~~ 534 (998)
T KOG2019|consen 457 QLKKLKQRLAEKSKKLFQPLIKKYILNNPHCFTFSMQPDPEFAEKL-EQEEAT-KLEEKKAALTEEDLAEIAKAGEELRE 534 (998)
T ss_pred HHHHHHHHHhhhchhHHHHHHHHHHhcCCceEEEEecCCchhhHHH-HHHHHH-HHHHHHhhCCHHHHHHHHHHHHHHHH
Confidence 222 22345567777 5664332 2222233433 2110 000100 0011223455544433321100 000
Q ss_pred CCCCCCCCCCCCCCcccccccCCCCCcCCCCCeEEecCCCeEEEEecCCccCCcceeEEEEEecCCCCCCHHHHHHHHHH
Q 003164 363 SLQLPSQNEFIPTDFSIRANDISNDLVTVTSPTCIIDEPLIRFWYKLDNTFKLPRANTYFRINLKGGYDNVKNCILTELF 442 (843)
Q Consensus 363 ~~~lp~~~~~i~~~~~~~~~~~~~~~~~~~~p~~~~~~ng~~v~~~~~~~~~~p~~~i~~~~~~~~~~~~~~~~~~~~l~ 442 (843)
.-.-|....|+|+ +.+.+.... ....|..+.+-||+++.+.--.+ .+.+|++..++.+..+.+...+..++
T Consensus 535 kQ~tp~dlsClPt-L~vsDIp~~----~~~~~~~v~dingvkv~~~dl~t----ngi~Y~r~~~~l~~~p~eL~PylPlf 605 (998)
T KOG2019|consen 535 KQSTPEDLSCLPT-LNVSDIPKT----IPYTKLEVGDINGVKVQRCDLFT----NGITYTRVVFDLNSLPEELLPYLPLF 605 (998)
T ss_pred hhCCccccccccc-cccccCCCC----CCccceeeeeccCceeEEeeccC----CceEEEEEeeccccCcHHhhcchHHH
Confidence 0112333345553 122111000 11234556778999987775333 36889998888877777888999999
Q ss_pred HHHHHHHH------HHH--hHHhhhcccEeEEEEec--------ceeEEEEcccCCCHHHHHHHHHHHHhcCCCC-HHHH
Q 003164 443 IHLLKDEL------NEI--IYQASVAKLETSVSIFS--------DKLELKVYGFNDKLPVLLSKILAIAKSFLPS-DDRF 505 (843)
Q Consensus 443 ~~~l~~~~------~~~--~~~~~~~g~~~~~~~~~--------~~~~~~~~g~s~~~~~~l~ll~~~l~~p~~~-~~~~ 505 (843)
+..+.... .+. ......+|++++..... -++.+...++..+.+.+++++..++.++.|. ++.|
T Consensus 606 c~sll~lGt~~lsf~el~qqI~rkTGGiS~~p~~~s~~~~d~p~~~i~~~~~~l~rn~~dlfel~n~il~e~~f~n~dkf 685 (998)
T KOG2019|consen 606 CQSLLNLGTGDLSFVELEQQIGRKTGGISVSPLVSSDDGMDEPELGIVFSGSMLDRNADDLFELWNKILQETCFTNQDKF 685 (998)
T ss_pred HHHHHhcCCCcccHHHHHHHhhhhcCceeecceeccCCCCCccceeEEechhhhcCChhHHHHHHHHHhcccCcccHHHH
Confidence 98876432 111 12223567776665432 2344555555678999999999999999996 5789
Q ss_pred HHHHHHHHHHHhcCcC-ChhhHHHHHHHHhhccCCCC--------HHHHHHHhccCC-------HHHHHHHHHHHHhhhc
Q 003164 506 KVIKEDVVRTLKNTNM-KPLSHSSYLRLQVLCQSFYD--------VDEKLSILHGLS-------LADLMAFIPELRSQLY 569 (843)
Q Consensus 506 ~~~k~~~~~~l~~~~~-~p~~~~~~~~~~~l~~~~~~--------~~~~~~~l~~it-------~edl~~~~~~~~~~~~ 569 (843)
.......+.++.+... +....|.......+....+- ....+..|.... .+.|.+..+.+.+.++
T Consensus 686 kvlvk~s~s~~~n~i~dsGH~~A~~rs~a~l~~ag~i~EqlgGl~ql~fl~~L~~~~d~d~~~i~~kL~eIrk~ll~~ng 765 (998)
T KOG2019|consen 686 KVLVKQSASRMTNGIADSGHGFAAARSAAMLTPAGWISEQLGGLSQLEFLHRLEEKVDNDWEPIVSKLTEIRKSLLNTNG 765 (998)
T ss_pred HHHHHHHHHHhhccCCcccchhHhhhhhcccCcccchHhHhcchHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCC
Confidence 9988888888888765 44444444444444433221 111122222221 3455666566677889
Q ss_pred eeeeeecCCCH-HHHHHHHHHHHhhcCC-CCCCccccccceeeecCCCCeEEEEeccCCCCCCCeEEEEEEeeccccCcc
Q 003164 570 IEGLCHGNLSQ-EEAIHISNIFKSIFSV-QPLPIEMRHQECVICLPSGANLVRNVSVKNKCETNSVIELYFQIEQEKGME 647 (843)
Q Consensus 570 ~~~~i~Gdi~~-~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 647 (843)
+.+.|..|-.. ..+.+.+++|...+|. .|........ ..+|.+.... .+. -|..+-..+.-...+ -+.
T Consensus 766 ~~~~itAd~~q~~~vEkav~kFl~~lp~e~p~g~~st~d---~r~p~~~~~i-~~~--~P~fqvnyvgka~~~----vpy 835 (998)
T KOG2019|consen 766 MIVNITADPKQLTNVEKAVEKFLDSLPRENPSGSKSTWD---ARLPLRSEAI-RVV--IPTFQVNYVGKAGLG----VPY 835 (998)
T ss_pred eEEEEecCcccchhHHHHHHHHHHhccccCCCCCccCcc---ccCCCCceeE-EEe--ccccchhhhhhhccc----ccC
Confidence 99999876433 4678889999999983 3322211111 1122221111 111 111101111001111 235
Q ss_pred cHHHHHHHHHHHHHhCh-hHHHHHhhhccccEEEEeeeeeeCCeeEEEEEEeCCCCChhHHHHHHHHHHHHHHHHH-hcC
Q 003164 648 LTRLKALIDLFDEILEE-PFFNQLRTKEQLGYVVECSPRVTYRVFGFCFCIQSSKYNPIYLQERIDNFISGLDELL-EGL 725 (843)
Q Consensus 648 ~~~~~~~~~ll~~~l~s-~l~~~LRek~gl~Y~v~~~~~~~~~~~~~~~~i~s~~~~~~~~~~~i~~~~~~~~~~l-~~i 725 (843)
++++.+.+.+|...|+. .|++++||| |++|+-++.+....|..+++ |+ +||+ ..+.++.|-..-..+. ..+
T Consensus 836 t~~d~asl~vlS~~lt~k~Lh~evRek-GGAYGgg~s~~sh~GvfSf~----SY-RDpn-~lktL~~f~~tgd~~~~~~~ 908 (998)
T KOG2019|consen 836 THPDGASLQVLSKLLTNKWLHDEVREK-GGAYGGGCSYSSHSGVFSFY----SY-RDPN-PLKTLDIFDGTGDFLRGLDV 908 (998)
T ss_pred CCCCCcHHHHHHHHHHHHHHHHHHHHh-cCccCCccccccccceEEEE----ec-cCCc-hhhHHHhhcchhhhhhcCCc
Confidence 67788889999999975 679999997 88999999988777665443 55 4774 5567887777665555 469
Q ss_pred CHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHhcCcccccccHHHHHHHhcCCHHHHHHHHHHhhccCCCCcceEEEE
Q 003164 726 DDESFENYRSGLMAKLLEKDPSLTYESNRFWNQITDKRYMFDQSQKEAEDLKSIKKNDVISWYKTYLQQWSPKCRRLAVR 805 (843)
Q Consensus 726 te~el~~~k~~l~~~~~~~~~s~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~it~edi~~~a~~~l~~~~~~~~~~~~~ 805 (843)
++++|++||..+++.... +..+..+.-.. .++ +...+..+.+++.|-+++..|+.++|.+|+... .....+.
T Consensus 909 ~~~dldeAkl~~f~~VDa-p~~P~~kG~~~--fl~--gvtDemkQarREqll~vSl~d~~~vae~yl~~~---~~~~~va 980 (998)
T KOG2019|consen 909 DQQDLDEAKLGTFGDVDA-PQLPDAKGLLR--FLL--GVTDEMKQARREQLLAVSLKDFKAVAEAYLGVG---DKGVAVA 980 (998)
T ss_pred cccchhhhhhhhcccccC-CcCCcccchHH--HHh--cCCHHHHHHHHHHHHhhhHHHHHHHHHHHhccC---CcceEEE
Confidence 999999999999999864 44444444222 222 233456667788899999999999999999763 2356666
Q ss_pred EecCCC
Q 003164 806 VWGCNT 811 (843)
Q Consensus 806 v~g~~~ 811 (843)
|.|...
T Consensus 981 v~g~E~ 986 (998)
T KOG2019|consen 981 VAGPED 986 (998)
T ss_pred eeCccC
Confidence 666543
No 7
>TIGR02110 PQQ_syn_pqqF coenzyme PQQ biosynthesis probable peptidase PqqF. In a subset of species that make coenzyme PQQ (pyrrolo-quinoline-quinone), this probable peptidase is found in the PQQ biosynthesis region and is thought to act as a protease on PqqA (TIGR02107), a probable peptide precursor of the coenzyme. PQQ is required for some glucose dehydrogenases and alcohol dehydrogenases.
Probab=100.00 E-value=6.2e-36 Score=335.04 Aligned_cols=572 Identities=18% Similarity=0.166 Sum_probs=359.0
Q ss_pred ChhhhcchhccCCcchHHHHHHhhHhHhhhhcCChHHHHHHHHHhhCCCCCCCCccccCcHhhhhhhhhcCccHHHHHHH
Q 003164 1 MRFSQFFISPLMKVEAMEREVLAVDSEFNQALQNDACRLQQLQCHTSQLGHAFNKFFWGNKKSLIGAMEKGINLQEQIMK 80 (843)
Q Consensus 1 ~~~~~~~~~p~~~~~~i~~Er~vV~~E~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~G~~~~l~~~~~~~~~~~~~l~~ 80 (843)
++|+||+.+|.|+++++++||++|++|++...++|..+.++.+...+|++|||+++++|+.++|.++ +..+.++|++
T Consensus 99 ~lLaD~l~~P~f~eeeierEr~vvl~Ei~~~~ddp~~~~~~~l~~~l~~~HPy~~~~iGt~esL~~i---t~~t~edL~~ 175 (696)
T TIGR02110 99 ARLCDMLARPLLTAEDQQREREVLEAEYIAWQNDADTLREAALLDALQAGHPLRRFHAGSRDSLALP---NTAFQQALRD 175 (696)
T ss_pred HHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHcCCCCCCCCCCCCCHHHHhCc---ccchHHHHHH
Confidence 4799999999999999999999999999999999999888888888999999999999999999971 0035999999
Q ss_pred HHHhccCccccEEEEecCCCHHHHHHHHHHhcccccCCCCCCCCCCcccccccccceEEEEEccCceEEEEEEecCCchh
Q 003164 81 LYMNYYQGGLMKLVVIGGEPLDTLQSWVVELFANVRKGPQIKPQFTVEGTIWKACKLFRLEAVKDVHILDLTWTLPCLHQ 160 (843)
Q Consensus 81 fy~~~Y~p~nm~lvi~Gd~~~~~~~~~i~~~F~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~l~~~~p~~~~ 160 (843)
||++||+|+||+|+|+||+++++++++++++|+.|+++..+.+..+ .|.....+. .+.. .....+.+.|.+|....
T Consensus 176 F~~~~Y~p~NmvLvIvGdvs~eel~~l~e~~f~~~~~~~~~~~~~~--~p~~~~~~~-~~~~-~~~~q~~l~~~~p~~~~ 251 (696)
T TIGR02110 176 FHRRHYQAGNMQLWLQGPQSLDELEQLAARFGASLAAGGECAQAPP--APLLRFDRL-TLAG-GSEPRLWLLFALAGLPA 251 (696)
T ss_pred HHHHhcchhcEEEEEEeCCCHHHHHHHHHHHhCCCCCCCCCCCCCC--CCCCCCcee-EEEe-cCcceEEEEEeecCCCC
Confidence 9999999999999999999999999999999999986543322211 122112222 2221 23467778887775432
Q ss_pred hhhcCcHHHHHHhhcCCCCCcHHHHHhhcCcccccccccCCCCCccCCceeEEEEEEEcCHhhHHhHHHHHHHHHHHHHH
Q 003164 161 EYLKKSEDYLAHLLGHEGRGSLHSFLKGRGWATSISAGVGDEGMHRSSIAYIFVMSIHLTDSGLEKIFDIIGFVYQYIKL 240 (843)
Q Consensus 161 ~~~~~~~~~l~~ll~~~~~~sL~~~L~~~~l~~~~~~~~~~~~~~~~~~~~~f~i~~~l~~~~~~~~~~~~~~l~~~l~~ 240 (843)
.+..++.+++.+|++++.|+|+..||++||+++++++.... ..+.+.|.|.+.++..+.++.+++++.++++|++
T Consensus 252 -~d~~al~lL~~iLg~g~sSrL~~~LRe~GLaysV~s~~~~~----~~g~~lf~I~~~lt~~~~~~~~~v~~~i~~~L~~ 326 (696)
T TIGR02110 252 -TARDNVTLLCEFLQDEAPGGLLAQLRERGLAESVAATWLYQ----DAGQALLALEFSARCISAAAAQQIEQLLTQWLGA 326 (696)
T ss_pred -CChHHHHHHHHHhCCCcchHHHHHHHHCCCEEEEEEecccc----CCCCcEEEEEEEEcCCCccCHHHHHHHHHHHHHH
Confidence 12236899999999998999999999999999999865321 1344589999998665556899999999999999
Q ss_pred HHhc--CCchhHHHHHHHhhhcccccCCCCChHHHHHHHHHhCCCCCccceeecCcccccCCHHHHHHHHhccCcCceEE
Q 003164 241 LRQV--SPQKWIFKELQDIGNMEFRFAEEQPQDDYAAELAGNLLIYPAEHVIYGEYMYEVWDEEMIKHLLGFFMPENMRI 318 (843)
Q Consensus 241 l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~l~~~~~~~ 318 (843)
+++. +++.++++.++. ..|.+... ++.+.+..-+ ...++.- . ..=....+...++.+. ++ .
T Consensus 327 L~~~~~~~~~eel~rlk~---~~~~~~~~-~~l~~~r~~~---~~~~~~~--~-----~~~~~~~~~~~l~~~~-~~-~- 389 (696)
T TIGR02110 327 LAEQTWAEQLEHYAQLAQ---RRFQTLAL-SPLAQLRGRA---LGFALGC--A-----LPDALTDFLAALQDCP-RT-R- 389 (696)
T ss_pred HHhcCCCCCHHHHHHHHH---hhhhhccc-ChHHHHhhhc---cCCCCcc--c-----CcchHHHHHHHHhhcc-cc-c-
Confidence 9988 787777776665 34443332 2444333111 1111110 0 0001122222222111 11 0
Q ss_pred EEEeCCCCCCCCCcccceeecccccccCCHHHHHhhcCCCCCCCCCCCCCCCCCCCC---------------------Cc
Q 003164 319 DVVSKSFAKSQDFHYEPWFGSRYTEEDISPSLMELWRNPPEIDVSLQLPSQNEFIPT---------------------DF 377 (843)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~y~~~~i~~~~~~~~~~~~~~~~~~~lp~~~~~i~~---------------------~~ 377 (843)
..|++|+.+|++.. .|
T Consensus 390 -------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 426 (696)
T TIGR02110 390 -------------------------------------------LLTQQQPGAPFAHSGLHAPVARLARAVVQARSVSLTL 426 (696)
T ss_pred -------------------------------------------ccccCCCCcchhhhhcccccccccccccccccccccc
Confidence 01222222222200 00
Q ss_pred ccccccCCCCCcCCCCCeEEecCCCeEEEEecCCccCCcceeEEEEEecCCCCCCHHHHHHHHHHHHHHHHHHHHHhHHh
Q 003164 378 SIRANDISNDLVTVTSPTCIIDEPLIRFWYKLDNTFKLPRANTYFRINLKGGYDNVKNCILTELFIHLLKDELNEIIYQA 457 (843)
Q Consensus 378 ~~~~~~~~~~~~~~~~p~~~~~~ng~~v~~~~~~~~~~p~~~i~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~ 457 (843)
...... ....|..+.. .+..++.. ..+.++++|..++.... .+...+...+....-+.
T Consensus 427 ~~~~~~------~~~~~~~~~~-----~~~~~~~~---~~~~l~l~w~~~~~~~~--------~~~~~l~~~l~~l~~~~ 484 (696)
T TIGR02110 427 AASRCS------APKSPTRCAF-----LAALPSDK---TERALALRWGFPSHPPE--------ELALALQRQLRPLLADA 484 (696)
T ss_pred cccccc------cccccccchh-----hhccCCCC---cccceeeeccCCCCcch--------HHHHHHHHHHHHHHHHH
Confidence 000000 0000111110 11112221 24678888887663211 13344555565555566
Q ss_pred hhcccEeEEEEecceeEEEEcccCCCHHHHHHHHHHHHhcCCCC--HHHHHHHHHHHHHHHhcCcCChhhHHHHHHHHhh
Q 003164 458 SVAKLETSVSIFSDKLELKVYGFNDKLPVLLSKILAIAKSFLPS--DDRFKVIKEDVVRTLKNTNMKPLSHSSYLRLQVL 535 (843)
Q Consensus 458 ~~~g~~~~~~~~~~~~~~~~~g~s~~~~~~l~ll~~~l~~p~~~--~~~~~~~k~~~~~~l~~~~~~p~~~~~~~~~~~l 535 (843)
..+|...+++...+...+.+.|..+-+..++..+...+..|.-. ...= ....|...+.+.+.+.+
T Consensus 485 ~~~g~~~~~~~~~~~w~l~l~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~-------------~~~~~~~i~ir~ll~~l 551 (696)
T TIGR02110 485 RHAGVNGSWQATGASWQLLLNGPRSPMRAVFSVALALLALAAPMLAQPAA-------------NRASAPSIPIRQLLAAL 551 (696)
T ss_pred HhcCceeEEEEcCCeEEEEcCCCchhHHHHHHHHHHHHhCCCcccccccc-------------cCCCCccchHHHHHHhc
Confidence 77899999999999999999999999999999988888887321 1100 00112223333322222
Q ss_pred ccCCCCHHHHHHHhccCCHHHHHHHHHHHHhhhceeeeeecCCCHHHHHHHHHHHHhhcCCCCCCccccccceeeecCCC
Q 003164 536 CQSFYDVDEKLSILHGLSLADLMAFIPELRSQLYIEGLCHGNLSQEEAIHISNIFKSIFSVQPLPIEMRHQECVICLPSG 615 (843)
Q Consensus 536 ~~~~~~~~~~~~~l~~it~edl~~~~~~~~~~~~~~~~i~Gdi~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 615 (843)
-... . ....+. .+. +....+.. + +... +......+|..+... .+.+.+. ..+
T Consensus 552 p~~~-~-----~~~~~~--~~~--~~~~~~~~-----~-----~~~~----~~~~l~~~~~~~~~~--~~~~~~~--~~~ 603 (696)
T TIGR02110 552 PERL-L-----KSLPAQ--QDD--WLAARWGA-----A-----TQLA----QRVALQLSPGTADLA--RPTPLPA--RLG 603 (696)
T ss_pred hHhh-c-----cCcccc--ccc--hhhhhccc-----c-----hhHH----HHHHHHhCCCCCccC--CCCCCCc--ccc
Confidence 1100 0 000000 000 10011110 0 1111 222223333211100 0100010 122
Q ss_pred CeEEEEeccCCCCCCCeEEEEEEeeccccCcccHHHHHHHHHHHHHhChhHHHHHhhhccccEEEEeeeeeeCCeeEEEE
Q 003164 616 ANLVRNVSVKNKCETNSVIELYFQIEQEKGMELTRLKALIDLFDEILEEPFFNQLRTKEQLGYVVECSPRVTYRVFGFCF 695 (843)
Q Consensus 616 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~s~l~~~LRek~gl~Y~v~~~~~~~~~~~~~~~ 695 (843)
.. +..+. .++ ..++++++++. +..+..+.++..+|+.++..++|++||.+.|+||.|+|++....+..|+.|
T Consensus 604 ~~-~~~~~--~~~-~e~alllf~p~----~~~~~~~~aa~rlla~l~~~~f~qrlRve~qlGY~v~~~~~~~~~~~gllf 675 (696)
T TIGR02110 604 RG-WVPLA--CDG-GEQALLLFCPL----PTADVASEAAWRLLAQLLEPPFFQRLRVELQLGYVVFCRYRRVADRDGLLF 675 (696)
T ss_pred cc-eEecc--CCC-CCcEEEEEecC----CCCCHHHHHHHHHHHHHhchhHHHHHHHhhccceEEEEeeEEcCCcceeEE
Confidence 21 22232 223 46667788888 888999999999999999999999999999999999999999999999999
Q ss_pred EEeCCCCChhHHHHHHHHHH
Q 003164 696 CIQSSKYNPIYLQERIDNFI 715 (843)
Q Consensus 696 ~i~s~~~~~~~~~~~i~~~~ 715 (843)
.+||+.+++..+.++|+.|+
T Consensus 676 ~~QSP~~~~~~l~~h~~~fl 695 (696)
T TIGR02110 676 ALQSPDASARELLQHIKRFL 695 (696)
T ss_pred EEeCCCCCHHHHHHHHHHHh
Confidence 99999999999999999886
No 8
>COG0612 PqqL Predicted Zn-dependent peptidases [General function prediction only]
Probab=100.00 E-value=4.2e-32 Score=301.05 Aligned_cols=405 Identities=13% Similarity=0.059 Sum_probs=307.4
Q ss_pred CeEEecCCCeEEEEecCCccCCcceeEEEEEecCCCCCCHHHHHHHHHHHHHHHHHHH-----HHhHHhhhcccEeEEEE
Q 003164 394 PTCIIDEPLIRFWYKLDNTFKLPRANTYFRINLKGGYDNVKNCILTELFIHLLKDELN-----EIIYQASVAKLETSVSI 468 (843)
Q Consensus 394 p~~~~~~ng~~v~~~~~~~~~~p~~~i~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----~~~~~~~~~g~~~~~~~ 468 (843)
....++.||++++..+.++ +|.+.+.+.+..+...++....|+++++.+++..+.+ +....-...|.......
T Consensus 17 ~~~~~L~nGl~~~~~~~~~--~~~vs~~~~v~~Gs~~e~~~~~G~AH~lehm~fkgt~~~~~~~i~~~~~~~G~~~na~t 94 (438)
T COG0612 17 LQVFTLPNGLRVITYPNPT--APTVSLDVWVKAGSRAEPAGKAGIAHFLEHMAFKGTTGLPSAELAEAFEKLGGQLNAFT 94 (438)
T ss_pred ceEEEcCCCCEEEEEeCCC--CCEEEEEEEEeecccCCCCCcccHHHHHHHHHccCCCCCChHHHHHHHHHhcCeeeccc
Confidence 4567899999999999875 6778888888866677788889999999999876532 22233345577677777
Q ss_pred ecceeEEEEcccCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHhcCcCChhhHHHHHHHHhhcc-CCC--CHHHH
Q 003164 469 FSDKLELKVYGFNDKLPVLLSKILAIAKSFLPSDDRFKVIKEDVVRTLKNTNMKPLSHSSYLRLQVLCQ-SFY--DVDEK 545 (843)
Q Consensus 469 ~~~~~~~~~~g~s~~~~~~l~ll~~~l~~p~~~~~~~~~~k~~~~~~l~~~~~~p~~~~~~~~~~~l~~-~~~--~~~~~ 545 (843)
+.+.+...++..+++++.+++++.+++.+|.|+++.|+++|..++++++...++|...+...+...+++ +++ +..|+
T Consensus 95 s~d~t~y~~~~l~~~~~~~l~llad~l~~p~f~~~~~e~Ek~vil~ei~~~~d~p~~~~~~~l~~~~~~~~p~~~~~~G~ 174 (438)
T COG0612 95 SFDYTVYYLSVLPDNLDKALDLLADILLNPTFDEEEVEREKGVILEEIRMRQDDPDDLAFERLLEALYGNHPLGRPILGT 174 (438)
T ss_pred cchhhhhhhhhchhhhHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhccCchHHHHHHHHHHhhccCCCCCCCCCC
Confidence 677777777778899999999999999999999999999999999999999999999999999888875 444 46778
Q ss_pred HHHhccCCHHHHHHHHHHHHhhhceeeeeecCCCHHHHHHHHHHHHhhcCCCCCCccccccceeeecCCCCeEEEEecc-
Q 003164 546 LSILHGLSLADLMAFIPELRSQLYIEGLCHGNLSQEEAIHISNIFKSIFSVQPLPIEMRHQECVICLPSGANLVRNVSV- 624 (843)
Q Consensus 546 ~~~l~~it~edl~~~~~~~~~~~~~~~~i~Gdi~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 624 (843)
.+.|+++|.+||++||+++|.|+|++++|+||++.+++..+++++++.++.. .++...+ ......+... . .+..
T Consensus 175 ~e~I~~it~~dl~~f~~k~Y~p~n~~l~vvGdi~~~~v~~~~~~~f~~~~~~-~~~~~~~--~~~~~~~~~~-~-~~~~~ 249 (438)
T COG0612 175 EESIEAITREDLKDFYQKWYQPDNMVLVVVGDVDAEEVVELIEKYFGDLPGA-APPPKIP--PEPPLGPERV-V-RVNDP 249 (438)
T ss_pred HHHHHhCCHHHHHHHHHHhcCcCceEEEEecCCCHHHHHHHHHHHHccCCcc-CCCCCCC--CccccCCCce-E-EecCC
Confidence 9999999999999999999999999999999999999999999999999861 1111011 1111111211 1 1111
Q ss_pred CCCCCCCeEEEEEEeeccccCcc-cHHHHHHHHHHHHH----hChhHHHHHhhhccccEEEEeeeeeeCCeeEEEEEEeC
Q 003164 625 KNKCETNSVIELYFQIEQEKGME-LTRLKALIDLFDEI----LEEPFFNQLRTKEQLGYVVECSPRVTYRVFGFCFCIQS 699 (843)
Q Consensus 625 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ll~~~----l~s~l~~~LRek~gl~Y~v~~~~~~~~~~~~~~~~i~s 699 (843)
..+...++.+...++. ... +..+++++.+++.+ ++||||.++||++||+|++++........+.+.+++.+
T Consensus 250 ~~~~~~~~~~~~g~~~----~~~~~~~~~~~~~l~~~llgg~~~SrLf~~~re~~glay~~~~~~~~~~~~~~~~~~~~~ 325 (438)
T COG0612 250 EQPDLEQAWLALGYPG----PDYDSPDDYAALLLLNGLLGGGFSSRLFQELREKRGLAYSVSSFSDFLSDSGLFSIYAGT 325 (438)
T ss_pred CCchhhhhhhhccccC----cCcCcchhhHHHHHHHHHhCCCcchHHHHHHHHhcCceeeeccccccccccCCceEEEEe
Confidence 0112233344344443 222 22355555555555 46999999999999999999766654444444455555
Q ss_pred CCCChhHHHHHHHHHHHHHHHHH-hcCCHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHhcCcccccccHHHHHHHhc
Q 003164 700 SKYNPIYLQERIDNFISGLDELL-EGLDDESFENYRSGLMAKLLEKDPSLTYESNRFWNQITDKRYMFDQSQKEAEDLKS 778 (843)
Q Consensus 700 ~~~~~~~~~~~i~~~~~~~~~~l-~~ite~el~~~k~~l~~~~~~~~~s~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~ 778 (843)
...+++.+.+.|.+.+.++.+.+ ..+|+++++.+|..+.+.+....+++...++.++.....+ ......+++.+.|++
T Consensus 326 ~~~~~~~~~~~i~~~~~~~~~~~~~~~t~~~~~~~k~~~~~~~~~~~~s~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~ 404 (438)
T COG0612 326 APENPEKTAELVEEILKALKKGLKGPFTEEELDAAKQLLIGLLLLSLDSPSSIAELLGQYLLLG-GSLITLEELLERIEA 404 (438)
T ss_pred cCCChhhHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHhhhccCCHHHHHHHHHHHHHhc-CCccCHHHHHHHHHh
Confidence 44578888888888887776543 2489999999999999999998999998888876655543 246778899999999
Q ss_pred CCHHHHHHHHHHhhccCCCCcceEEEEEecCCCCccc
Q 003164 779 IKKNDVISWYKTYLQQWSPKCRRLAVRVWGCNTNIKE 815 (843)
Q Consensus 779 it~edi~~~a~~~l~~~~~~~~~~~~~v~g~~~~~~~ 815 (843)
+|++||+++|++++.++ .++++++|+.+..++
T Consensus 405 vt~~dv~~~a~~~~~~~-----~~~~~~~~p~~~~~~ 436 (438)
T COG0612 405 VTLEDVNAVAKKLLAPE-----NLTIVVLGPEKALKD 436 (438)
T ss_pred cCHHHHHHHHHHhcCCC-----CcEEEEEcccccccc
Confidence 99999999999999874 589999998765543
No 9
>COG0612 PqqL Predicted Zn-dependent peptidases [General function prediction only]
Probab=99.97 E-value=9.4e-30 Score=282.30 Aligned_cols=308 Identities=17% Similarity=0.112 Sum_probs=224.8
Q ss_pred ChhhhcchhccCCcchHHHHHHhhHhHhhhhcCChHHHHHHHHHhhCCCCCCCCccccCcHhhhhhhhhcCccHHHHHHH
Q 003164 1 MRFSQFFISPLMKVEAMEREVLAVDSEFNQALQNDACRLQQLQCHTSQLGHAFNKFFWGNKKSLIGAMEKGINLQEQIMK 80 (843)
Q Consensus 1 ~~~~~~~~~p~~~~~~i~~Er~vV~~E~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~G~~~~l~~~~~~~~~~~~~l~~ 80 (843)
++++|++.+|.|++++|++||++|++|+++..++|.++....+...++++|||+++++|++++|.+ +++++|++
T Consensus 115 ~llad~l~~p~f~~~~~e~Ek~vil~ei~~~~d~p~~~~~~~l~~~~~~~~p~~~~~~G~~e~I~~------it~~dl~~ 188 (438)
T COG0612 115 DLLADILLNPTFDEEEVEREKGVILEEIRMRQDDPDDLAFERLLEALYGNHPLGRPILGTEESIEA------ITREDLKD 188 (438)
T ss_pred HHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhccCchHHHHHHHHHHhhccCCCCCCCCCCHHHHHh------CCHHHHHH
Confidence 478999999999999999999999999999999999999998989999999999999999999999 89999999
Q ss_pred HHHhccCccccEEEEecCCCHHHHHHHHHHhcccccCCCCCCCCCCcccccccccceEEEE----EccCceEEEEEEecC
Q 003164 81 LYMNYYQGGLMKLVVIGGEPLDTLQSWVVELFANVRKGPQIKPQFTVEGTIWKACKLFRLE----AVKDVHILDLTWTLP 156 (843)
Q Consensus 81 fy~~~Y~p~nm~lvi~Gd~~~~~~~~~i~~~F~~~~~~~~~~~~~~~~~p~~~~~~~~~~~----~~~~~~~l~l~~~~p 156 (843)
||++||+|+||+|+|+||++.+++..+++++|++|+....+.+... .|.....+...+. +......+.+.++.|
T Consensus 189 f~~k~Y~p~n~~l~vvGdi~~~~v~~~~~~~f~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 266 (438)
T COG0612 189 FYQKWYQPDNMVLVVVGDVDAEEVVELIEKYFGDLPGAAPPPKIPP--EPPLGPERVVRVNDPEQPDLEQAWLALGYPGP 266 (438)
T ss_pred HHHHhcCcCceEEEEecCCCHHHHHHHHHHHHccCCccCCCCCCCC--ccccCCCceEEecCCCCchhhhhhhhccccCc
Confidence 9999999999999999999999999999999999997222222211 1222233444432 112233445555554
Q ss_pred CchhhhhcCcHHHHHHhhcCCCCCcHHHHHhh-cCcccccccccCCCCCccCCceeEEEEEEEcCHhhHHhHHHHHHHHH
Q 003164 157 CLHQEYLKKSEDYLAHLLGHEGRGSLHSFLKG-RGWATSISAGVGDEGMHRSSIAYIFVMSIHLTDSGLEKIFDIIGFVY 235 (843)
Q Consensus 157 ~~~~~~~~~~~~~l~~ll~~~~~~sL~~~L~~-~~l~~~~~~~~~~~~~~~~~~~~~f~i~~~l~~~~~~~~~~~~~~l~ 235 (843)
......+..++.+++.+++++..|+|+..+|+ +||++++++..... ...+.+.+.+.... .+.+.+...+.
T Consensus 267 ~~~~~~~~~~~~l~~~llgg~~~SrLf~~~re~~glay~~~~~~~~~-----~~~~~~~~~~~~~~---~~~~~~~~~i~ 338 (438)
T COG0612 267 DYDSPDDYAALLLLNGLLGGGFSSRLFQELREKRGLAYSVSSFSDFL-----SDSGLFSIYAGTAP---ENPEKTAELVE 338 (438)
T ss_pred CcCcchhhHHHHHHHHHhCCCcchHHHHHHHHhcCceeeeccccccc-----cccCCceEEEEecC---CChhhHHHHHH
Confidence 43221123678999999998888889999996 79999988754432 23344444444432 23444555555
Q ss_pred HHHHHHHhc---CCchhHHHHHHHhhhcccccCCCCChHHHHHHHHHhCCC-CCccceeecCcccccCCHHHHHHHH-hc
Q 003164 236 QYIKLLRQV---SPQKWIFKELQDIGNMEFRFAEEQPQDDYAAELAGNLLI-YPAEHVIYGEYMYEVWDEEMIKHLL-GF 310 (843)
Q Consensus 236 ~~l~~l~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~~~~~~~~~~~~~~~~~~~~i~~~l-~~ 310 (843)
+.+..++.. ++++++++..+......+... .+++...+..+...... .+..........+..+++++|++++ ++
T Consensus 339 ~~~~~~~~~~~~~~t~~~~~~~k~~~~~~~~~~-~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vt~~dv~~~a~~~ 417 (438)
T COG0612 339 EILKALKKGLKGPFTEEELDAAKQLLIGLLLLS-LDSPSSIAELLGQYLLLGGSLITLEELLERIEAVTLEDVNAVAKKL 417 (438)
T ss_pred HHHHHHHHHhccCCCHHHHHHHHHHHHHHhhhc-cCCHHHHHHHHHHHHHhcCCccCHHHHHHHHHhcCHHHHHHHHHHh
Confidence 555555554 488889988887776665433 34456666666655543 3444444445678899999999998 67
Q ss_pred cCcCceEEEEEeCCC
Q 003164 311 FMPENMRIDVVSKSF 325 (843)
Q Consensus 311 l~~~~~~~~~~~~~~ 325 (843)
+.+++..+++.+|..
T Consensus 418 ~~~~~~~~~~~~p~~ 432 (438)
T COG0612 418 LAPENLTIVVLGPEK 432 (438)
T ss_pred cCCCCcEEEEEcccc
Confidence 788888888888754
No 10
>TIGR02110 PQQ_syn_pqqF coenzyme PQQ biosynthesis probable peptidase PqqF. In a subset of species that make coenzyme PQQ (pyrrolo-quinoline-quinone), this probable peptidase is found in the PQQ biosynthesis region and is thought to act as a protease on PqqA (TIGR02107), a probable peptide precursor of the coenzyme. PQQ is required for some glucose dehydrogenases and alcohol dehydrogenases.
Probab=99.93 E-value=4e-24 Score=240.26 Aligned_cols=328 Identities=11% Similarity=-0.031 Sum_probs=234.0
Q ss_pred EecCCCeEEEEecCCccCCcceeEEEEEecCCCCCCHHHHHHHHHHHHHHHHHHHH------HhHHhhhcccEeEEEEec
Q 003164 397 IIDEPLIRFWYKLDNTFKLPRANTYFRINLKGGYDNVKNCILTELFIHLLKDELNE------IIYQASVAKLETSVSIFS 470 (843)
Q Consensus 397 ~~~~ng~~v~~~~~~~~~~p~~~i~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~------~~~~~~~~g~~~~~~~~~ 470 (843)
++++||++|++.+++. .|.+.+.+.+..+...++.+..++++++.+|+..+... ........|.+++.+.+.
T Consensus 3 ~tL~NGLrVllv~~p~--~p~vav~l~v~aGS~~Ep~~~~GLAHfLEHMLFkGT~~~~~~~~i~~~le~lGG~lNA~Ts~ 80 (696)
T TIGR02110 3 ITLPNGLRVHLYHQPD--AKRAAALLRVAAGSHDEPSAWPGLAHFLEHLLFLGGERFQGDDRLMPWVQRQGGQVNATTLE 80 (696)
T ss_pred EEcCCCCEEEEEECCC--CCEEEEEEEEeeccCCCCCCCCcHHHHHHHHHhcCCCCCCcHHHHHHHHHHhCCeEEEEEcC
Confidence 5789999999999875 67888888888777677778899999999999765321 222223458889999999
Q ss_pred ceeEEEEcccCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHhcCcCChhhHHHHHHHHhhcc-CCCC--HHHHHH
Q 003164 471 DKLELKVYGFNDKLPVLLSKILAIAKSFLPSDDRFKVIKEDVVRTLKNTNMKPLSHSSYLRLQVLCQ-SFYD--VDEKLS 547 (843)
Q Consensus 471 ~~~~~~~~g~s~~~~~~l~ll~~~l~~p~~~~~~~~~~k~~~~~~l~~~~~~p~~~~~~~~~~~l~~-~~~~--~~~~~~ 547 (843)
+.+.+.++.++++++.+++++.+++.+|.|++++++++|+.++++++...++|..++.+.+...+++ ++|. ..|+.+
T Consensus 81 d~T~y~~~v~~~~l~~aL~lLaD~l~~P~f~eeeierEr~vvl~Ei~~~~ddp~~~~~~~l~~~l~~~HPy~~~~iGt~e 160 (696)
T TIGR02110 81 RTTAFFFELPAAALAAGLARLCDMLARPLLTAEDQQREREVLEAEYIAWQNDADTLREAALLDALQAGHPLRRFHAGSRD 160 (696)
T ss_pred CeEEEEEEecHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHcCCCCCCCCCCCCCHH
Confidence 9999999999999999999999999999999999999999999999988889998888888887764 4554 567788
Q ss_pred HhccCC---HHHHHHHHHHHHhhhceeeeeecCCCHHHHHHHHHHHHhhcCCCCCCccccccceeeecCCCCeEEEEecc
Q 003164 548 ILHGLS---LADLMAFIPELRSQLYIEGLCHGNLSQEEAIHISNIFKSIFSVQPLPIEMRHQECVICLPSGANLVRNVSV 624 (843)
Q Consensus 548 ~l~~it---~edl~~~~~~~~~~~~~~~~i~Gdi~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 624 (843)
+|+.++ .+|+++||+++|.++|++++|+||++.++++++++++++.++.++.+....+ . .........+..
T Consensus 161 sL~~it~~t~edL~~F~~~~Y~p~NmvLvIvGdvs~eel~~l~e~~f~~~~~~~~~~~~~~---~-p~~~~~~~~~~~-- 234 (696)
T TIGR02110 161 SLALPNTAFQQALRDFHRRHYQAGNMQLWLQGPQSLDELEQLAARFGASLAAGGECAQAPP---A-PLLRFDRLTLAG-- 234 (696)
T ss_pred HHhCcccchHHHHHHHHHHhcchhcEEEEEEeCCCHHHHHHHHHHHhCCCCCCCCCCCCCC---C-CCCCCceeEEEe--
Confidence 888765 9999999999999999999999999999999999999998875432211010 0 011111112111
Q ss_pred CCCCCCCeEEEEEEeeccccCcccHH--HHHHHHHHHHHhChhHHHHHhhhccccEEEEeeeeee-CCeeEEEEEEeCCC
Q 003164 625 KNKCETNSVIELYFQIEQEKGMELTR--LKALIDLFDEILEEPFFNQLRTKEQLGYVVECSPRVT-YRVFGFCFCIQSSK 701 (843)
Q Consensus 625 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ll~~~l~s~l~~~LRek~gl~Y~v~~~~~~~-~~~~~~~~~i~s~~ 701 (843)
. ..++..+...++. .....+ ..++..+|++.++|+|+.+||+ +||+|+|++++... .+...+.+++....
T Consensus 235 ~--~~~q~~l~~~~p~----~~~~d~~al~lL~~iLg~g~sSrL~~~LRe-~GLaysV~s~~~~~~~g~~lf~I~~~lt~ 307 (696)
T TIGR02110 235 G--SEPRLWLLFALAG----LPATARDNVTLLCEFLQDEAPGGLLAQLRE-RGLAESVAATWLYQDAGQALLALEFSARC 307 (696)
T ss_pred c--CcceEEEEEeecC----CCCCChHHHHHHHHHhCCCcchHHHHHHHH-CCCEEEEEEeccccCCCCcEEEEEEEEcC
Confidence 1 2234444333332 222222 2333445555567899999997 89999999865322 22224555555311
Q ss_pred CChhHHHHHHHHHHHHHHHHH-h--cCCHHHHHHHHHHHHH
Q 003164 702 YNPIYLQERIDNFISGLDELL-E--GLDDESFENYRSGLMA 739 (843)
Q Consensus 702 ~~~~~~~~~i~~~~~~~~~~l-~--~ite~el~~~k~~l~~ 739 (843)
..+++.++.+..+.+++.++. + +++.+|+.++|+.-+.
T Consensus 308 ~~~~~~~~v~~~i~~~L~~L~~~~~~~~~eel~rlk~~~~~ 348 (696)
T TIGR02110 308 ISAAAAQQIEQLLTQWLGALAEQTWAEQLEHYAQLAQRRFQ 348 (696)
T ss_pred CCccCHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHhhhh
Confidence 122234444444444444433 4 7899999999986443
No 11
>KOG0960 consensus Mitochondrial processing peptidase, beta subunit, and related enzymes (insulinase superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.93 E-value=2.3e-23 Score=205.47 Aligned_cols=404 Identities=10% Similarity=0.036 Sum_probs=306.4
Q ss_pred eEEecCCCeEEEEecCCccCCcceeEEEEEecCCCCCCHHHHHHHHHHHHHHHHHHHH-----HhHHhhhcccEeEEEEe
Q 003164 395 TCIIDEPLIRFWYKLDNTFKLPRANTYFRINLKGGYDNVKNCILTELFIHLLKDELNE-----IIYQASVAKLETSVSIF 469 (843)
Q Consensus 395 ~~~~~~ng~~v~~~~~~~~~~p~~~i~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----~~~~~~~~g~~~~~~~~ 469 (843)
+..++.||++|---.+ ..+..+|.+-|..+...++.++-+.++++.+|...+... .....+..|.-++.+..
T Consensus 35 ~vttL~NGlrVaTE~~---~a~TATVGVwidaGSR~EnekNNG~ahFLEhlaFKGT~~Rs~~alElEieniGahLNAytS 111 (467)
T KOG0960|consen 35 EVTTLPNGLRVATEHN---SASTATVGVWIDAGSRFENEKNNGTAHFLEHLAFKGTKNRSQAALELEIENIGAHLNAYTS 111 (467)
T ss_pred eEEEcCCCcEEEeccC---CCcceEEEEEeccCccccccccccHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHhccccc
Confidence 4567899999987765 256789999999888888999999999999986554322 11222344666778888
Q ss_pred cceeEEEEcccCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHhcCcCChhhHHHHHHHHhhc-cCC--CCHHHHH
Q 003164 470 SDKLELKVYGFNDKLPVLLSKILAIAKSFLPSDDRFKVIKEDVVRTLKNTNMKPLSHSSYLRLQVLC-QSF--YDVDEKL 546 (843)
Q Consensus 470 ~~~~~~~~~g~s~~~~~~l~ll~~~l~~p~~~~~~~~~~k~~~~~~l~~~~~~p~~~~~~~~~~~l~-~~~--~~~~~~~ 546 (843)
.+.....+++++++++..++++.|++++..+.+..++++|..++++.+....+-.++.++.+....+ +.| .+..|..
T Consensus 112 ReqT~yyakal~~dv~kavdiLaDIlqns~L~~s~IerER~vILrEmqevd~~~~eVVfdhLHatafQgtPL~~tilGp~ 191 (467)
T KOG0960|consen 112 REQTVYYAKALSKDVPKAVDILADILQNSKLEESAIERERDVILREMQEVDKNHQEVVFDHLHATAFQGTPLGRTILGPS 191 (467)
T ss_pred ccceeeehhhccccchHHHHHHHHHHHhCccchhHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhcCCcccccccChh
Confidence 8999999999999999999999999999999999999999999999988776666788888777655 333 4577889
Q ss_pred HHhccCCHHHHHHHHHHHHhhhceeeeeecCCCHHHHHHHHHHHHhhcCCCCCCccccccceeeecCCCCeEEEEeccCC
Q 003164 547 SILHGLSLADLMAFIPELRSQLYIEGLCHGNLSQEEAIHISNIFKSIFSVQPLPIEMRHQECVICLPSGANLVRNVSVKN 626 (843)
Q Consensus 547 ~~l~~it~edl~~~~~~~~~~~~~~~~i~Gdi~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 626 (843)
+.|++|+.+||++|.+.+|.+.++.+...|.++-+++.++++++++.++....+.. .+......+ .+..+. + .+
T Consensus 192 enI~si~r~DL~~yi~thY~~~RmVlaaaGgV~He~lv~la~k~fg~~~~~~~~~~-~~~~~~~~F-tgsEvR--~--rd 265 (467)
T KOG0960|consen 192 ENIKSISRADLKDYINTHYKASRMVLAAAGGVKHEELVKLAEKYFGDLSKLQTGDK-VPLVPPARF-TGSEVR--V--RD 265 (467)
T ss_pred hhhhhhhHHHHHHHHHhcccCccEEEEecCCcCHHHHHHHHHHHcCCCcccccCcC-CCCCCCccc-cCceee--e--cC
Confidence 99999999999999999999999999999999999999999999999875322211 010000001 122222 2 22
Q ss_pred CCCCCeEEEEEEeeccccCcccHHHHHHHHHHHHHh-------------ChhHHHHHhhhccccEEEEeeeeeeCCeeEE
Q 003164 627 KCETNSVIELYFQIEQEKGMELTRLKALIDLFDEIL-------------EEPFFNQLRTKEQLGYVVECSPRVTYRVFGF 693 (843)
Q Consensus 627 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l-------------~s~l~~~LRek~gl~Y~v~~~~~~~~~~~~~ 693 (843)
++-+.+.+.+..-. ..+.++++.++.+.+.++ +++|-+.+-+. +|+-+..++...+.+.+-+
T Consensus 266 d~lP~a~~AiAVEG----~~w~~pD~~~l~van~iiG~wdr~~g~g~~~~s~La~~~~~~-~l~~sfqsFnt~YkDTGLw 340 (467)
T KOG0960|consen 266 DDLPLAHIAIAVEG----VSWAHPDYFALMVANTIIGNWDRTEGGGRNLSSRLAQKIQQD-QLCHSFQSFNTSYKDTGLW 340 (467)
T ss_pred CCCchhheeeeEec----CCcCCccHHHHHHHHHHhhhhhcccCCccCCccHHHHHHHHH-HHHHHHhhhhcccccccce
Confidence 23455555444443 558899999888888876 46788887776 5776666655555556656
Q ss_pred EEEEeCCCCChhHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHhcCcccccccHHHH
Q 003164 694 CFCIQSSKYNPIYLQERIDNFISGLDELLEGLDDESFENYRSGLMAKLLEKDPSLTYESNRFWNQITDKRYMFDQSQKEA 773 (843)
Q Consensus 694 ~~~i~s~~~~~~~~~~~i~~~~~~~~~~l~~ite~el~~~k~~l~~~~~~~~~s~~~~~~~~~~~i~~~~~~~~~~~~~~ 773 (843)
++|+-+ .++..++..+..+++++.++...+|+.|.++||+.+..++....++....+.....+++..+-- -...+.-
T Consensus 341 G~y~V~--~~~~~iddl~~~vl~eW~rL~~~vteaEV~RAKn~Lkt~Lll~ldgttpi~ediGrqlL~~Grr-i~l~El~ 417 (467)
T KOG0960|consen 341 GIYFVT--DNLTMIDDLIHSVLKEWMRLATSVTEAEVERAKNQLKTNLLLSLDGTTPIAEDIGRQLLTYGRR-IPLAELE 417 (467)
T ss_pred eEEEEe--cChhhHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHhhcCCc-CChHHHH
Confidence 666655 2788899999999999988778999999999999999999887776555677776676653311 1245667
Q ss_pred HHHhcCCHHHHHHHHHHhhccCCCCcceEEEEEecCCCCcccccccc
Q 003164 774 EDLKSIKKNDVISWYKTYLQQWSPKCRRLAVRVWGCNTNIKESEKHS 820 (843)
Q Consensus 774 ~~i~~it~edi~~~a~~~l~~~~~~~~~~~~~v~g~~~~~~~~~~~~ 820 (843)
++|++||.+||+++|.+|+-. +.+.+..+|+-+-+++-...|
T Consensus 418 ~rId~vt~~~Vr~va~k~iyd-----~~iAia~vG~ie~lpdy~~ir 459 (467)
T KOG0960|consen 418 ARIDAVTAKDVREVASKYIYD-----KDIAIAAVGPIEGLPDYNRIR 459 (467)
T ss_pred HHHhhccHHHHHHHHHHHhhc-----CCcceeeecccccCchHHHHh
Confidence 899999999999999999954 479999999988777764443
No 12
>PRK15101 protease3; Provisional
Probab=99.93 E-value=8.4e-24 Score=258.32 Aligned_cols=400 Identities=10% Similarity=0.004 Sum_probs=283.9
Q ss_pred CCeEEecCCCeEEEEecCCccCCcceeEEEEEecCCCCCCHHHHHHHHHHHHHHHHHHHHH----hHHh--hhcccEeEE
Q 003164 393 SPTCIIDEPLIRFWYKLDNTFKLPRANTYFRINLKGGYDNVKNCILTELFIHLLKDELNEI----IYQA--SVAKLETSV 466 (843)
Q Consensus 393 ~p~~~~~~ng~~v~~~~~~~~~~p~~~i~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~----~~~~--~~~g~~~~~ 466 (843)
....++++||++|++.+++. .|.+.+.+.+..|...++.+..|+++++.+|+..+...+ .+.. ...|.+++.
T Consensus 43 ~~~~~~L~NGL~v~l~~~~~--~~~~~~~l~v~~Gs~~ep~~~~GlAHflEHmlf~GT~~~p~~~~~~~~l~~~Gg~~NA 120 (961)
T PRK15101 43 QYQAIRLDNGMTVLLVSDPQ--AVKSLAALALPVGSLEDPDAQQGLAHYLEHMVLMGSKKYPQPDSLAEFLKKHGGSHNA 120 (961)
T ss_pred ceEEEEeCCCCEEEEEeCCC--CcceeEEEEeCcCCCCCCCCCCchHHHHHHHHhcCCccCCCcchHHHHHHHhCCCccc
Confidence 34567899999999999875 678888888887776777778999999999987553221 1222 345777888
Q ss_pred EEecceeEEEEcccCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHhcCcCChhhHHHHHHHHhhcc-CCCC--HH
Q 003164 467 SIFSDKLELKVYGFNDKLPVLLSKILAIAKSFLPSDDRFKVIKEDVVRTLKNTNMKPLSHSSYLRLQVLCQ-SFYD--VD 543 (843)
Q Consensus 467 ~~~~~~~~~~~~g~s~~~~~~l~ll~~~l~~p~~~~~~~~~~k~~~~~~l~~~~~~p~~~~~~~~~~~l~~-~~~~--~~ 543 (843)
..+.+.+.+.+.+.+++++.+|+++.+++.+|.|+++.++++|..+.++++...++|...+...+...+++ ++|+ ..
T Consensus 121 ~T~~d~T~y~~~~~~~~l~~aL~~~ad~~~~P~f~~~~~erE~~~v~~E~~~~~~~~~~~~~~~~~~~~~~~hp~~~~~~ 200 (961)
T PRK15101 121 STASYRTAFYLEVENDALPPAVDRLADAIAEPLLDPKNADRERNAVNAELTMARSRDGMRMAQVSAETINPAHPGSRFSG 200 (961)
T ss_pred eECCCceEEEEEcCHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHhhCCCCCCcccCCC
Confidence 88889999999999999999999999999999999999999999999999988778888888877777664 4453 56
Q ss_pred HHHHHhccC----CHHHHHHHHHHHHhhhceeeeeecCCCHHHHHHHHHHHHhhcCCCCCCccccccceeeecCCCCeEE
Q 003164 544 EKLSILHGL----SLADLMAFIPELRSQLYIEGLCHGNLSQEEAIHISNIFKSIFSVQPLPIEMRHQECVICLPSGANLV 619 (843)
Q Consensus 544 ~~~~~l~~i----t~edl~~~~~~~~~~~~~~~~i~Gdi~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 619 (843)
|..++|+++ ++++|++||+++|.+++++++|+||++.+++..+++++++.|+....+....+.+ ..........+
T Consensus 201 G~~etl~~~~~~~~~~~L~~f~~~~Y~p~nm~lvv~G~~~~~~l~~~~~~~F~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 279 (961)
T PRK15101 201 GNLETLSDKPGSKLQDALVDFYQRYYSANLMKAVIYSNQPLPELAKLAADTFGRVPNKNASVPEITVP-VVTDAQKGIII 279 (961)
T ss_pred CCHHHhhcCCchHHHHHHHHHHHHhCcccceEEEEEcCCCHHHHHHHHHHHhccCCCCCCCCCCCCCC-CCCHHHcCeEE
Confidence 778889887 6999999999999999999999999999999999999999998643221101110 00000011112
Q ss_pred EEeccCCCCCCCeEEEEEEeeccccCccc-----HHHHHHHHHHHHHhChhHHHHHhhhccccEEEEeeeeee--CCeeE
Q 003164 620 RNVSVKNKCETNSVIELYFQIEQEKGMEL-----TRLKALIDLFDEILEEPFFNQLRTKEQLGYVVECSPRVT--YRVFG 692 (843)
Q Consensus 620 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~ll~~~l~s~l~~~LRek~gl~Y~v~~~~~~~--~~~~~ 692 (843)
... +...+..+.+.|+. +... ....++..+|+....+.|+..|+ ++|++|+++++.... .+.+.
T Consensus 280 -~~~---~~~~~~~l~l~~~~----p~~~~~~~~~~~~~l~~ll~~~~~g~l~~~L~-~~gla~~v~s~~~~~~~~~~g~ 350 (961)
T PRK15101 280 -HYV---PAQPRKVLRVEFRI----DNNSAKFRSKTDEYISYLIGNRSPGTLSDWLQ-KQGLAEGISAGADPMVDRNSGV 350 (961)
T ss_pred -EEE---ECCCCcEEEEEEec----CCcHHHHhhCHHHHHHHHhcCCCCCcHHHHHH-HcCccceeeeccccccCCCceE
Confidence 111 22345566667776 3321 12344555666666677888885 889999999886532 23344
Q ss_pred EEEEEeCCCCChhHHHHHHHHHHHHHHHHH-hcCCHHHHHHHHHHHHHHHcCC-CCChHHHHHHHHHHHhcCcccccccH
Q 003164 693 FCFCIQSSKYNPIYLQERIDNFISGLDELL-EGLDDESFENYRSGLMAKLLEK-DPSLTYESNRFWNQITDKRYMFDQSQ 770 (843)
Q Consensus 693 ~~~~i~s~~~~~~~~~~~i~~~~~~~~~~l-~~ite~el~~~k~~l~~~~~~~-~~s~~~~~~~~~~~i~~~~~~~~~~~ 770 (843)
+.++++......+++++.++.+.+++..+. +++++++|+++|+.+..++... ..+..+....+-..+. .+++....
T Consensus 351 f~i~~~~~~~~~~~~~~v~~~i~~~i~~l~~~g~~~~el~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l 428 (961)
T PRK15101 351 FAISVSLTDKGLAQRDQVVAAIFSYLNLLREKGIDKSYFDELAHVLDLDFRYPSITRDMDYIEWLADTML--RVPVEHTL 428 (961)
T ss_pred EEEEEEcChHHHHhHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHhccccCCCCCChHHHHHHHHHHhh--hCCHHHhe
Confidence 556665421111367778888888887765 6999999999999988877443 2222223333222222 23333333
Q ss_pred HHHHHHhcCCHHHHHHHHHHhhccCCCCcceEEEEEecCCCC
Q 003164 771 KEAEDLKSIKKNDVISWYKTYLQQWSPKCRRLAVRVWGCNTN 812 (843)
Q Consensus 771 ~~~~~i~~it~edi~~~a~~~l~~~~~~~~~~~~~v~g~~~~ 812 (843)
.....++.+++++|+++++. |.++ .+.+.++++...
T Consensus 429 ~~~~~~~~~~~~~i~~~~~~-l~~~-----n~~i~~~~~~~~ 464 (961)
T PRK15101 429 DAPYIADRYDPKAIKARLAE-MTPQ-----NARIWYISPQEP 464 (961)
T ss_pred eCchhhhcCCHHHHHHHHhh-cCHh-----HEEEEEEeCCCC
Confidence 45577899999999999877 7774 577777776543
No 13
>KOG0961 consensus Predicted Zn2+-dependent endopeptidase, insulinase superfamily [Posttranslational modification, protein turnover, chaperones]
Probab=99.91 E-value=2.9e-21 Score=202.09 Aligned_cols=780 Identities=13% Similarity=0.117 Sum_probs=401.6
Q ss_pred hhhhcchhccCCcchHHHHH----------HhhHhHhhhhcCChHHHHHHHHHhhCC-CCCCCCccccCcHhhhhhhhhc
Q 003164 2 RFSQFFISPLMKVEAMEREV----------LAVDSEFNQALQNDACRLQQLQCHTSQ-LGHAFNKFFWGNKKSLIGAMEK 70 (843)
Q Consensus 2 ~~~~~~~~p~~~~~~i~~Er----------~vV~~E~~~~~~~~~~~~~~~~~~~~~-~~~p~~~~~~G~~~~l~~~~~~ 70 (843)
+|.|.+.+|.++.+++.-|+ +||.+||+...+...+.....++...| +.++|..-+.|-...|+.
T Consensus 117 vy~dHiL~P~Ltdeaf~TEVyHI~geg~d~GVVySEMq~~es~~~~im~~~~~~~~yP~~sgY~~eTGG~~knLR~---- 192 (1022)
T KOG0961|consen 117 VYIDHILTPMLTDEAFATEVYHITGEGNDAGVVYSEMQDHESEMESIMDRKTKEVIYPPFSGYAVETGGRLKNLRE---- 192 (1022)
T ss_pred HHHHhhcCcccchhhhhhheeeecCCCCccceeehhhhhhhcccchhhhhhhheeecCCCCCceeccCCChhhHHH----
Confidence 57889999999999987765 699999998766666666665666555 578999899999999999
Q ss_pred CccHHHHHHHHHHhccCccccEEEEecCCCHHHHHHHHHHhcccccCCCC-CCCCCCcccccc------c-ccceEE-E-
Q 003164 71 GINLQEQIMKLYMNYYQGGLMKLVVIGGEPLDTLQSWVVELFANVRKGPQ-IKPQFTVEGTIW------K-ACKLFR-L- 140 (843)
Q Consensus 71 ~~~~~~~l~~fy~~~Y~p~nm~lvi~Gd~~~~~~~~~i~~~F~~~~~~~~-~~~~~~~~~p~~------~-~~~~~~-~- 140 (843)
.+.+.+|+||+++|+|+||||+|+|.++.+++....+..=..++.... -++.++. |+. . ...... +
T Consensus 193 --lt~ekIR~yHK~~Y~~sN~cviVcG~v~~d~lL~~m~~~~neile~~s~vP~~~~r--Pf~~tn~~~~i~e~t~~tVe 268 (1022)
T KOG0961|consen 193 --LTLEKIRDYHKKFYHLSNMCVIVCGMVDHDQLLEIMNNVENEILEHMSTVPDHFPR--PFSFTNALSDIKESTVHTVE 268 (1022)
T ss_pred --hhHHHHHHHHHHhccccceEEEEecCcCHHHHHHHHHHHHhhhhhccccCCCCCCC--CcccccCcccCCccceeeee
Confidence 899999999999999999999999999999998776654433332211 1122221 321 1 112222 1
Q ss_pred EE--ccCceEEEEEEecCCchhhhhcCcHHHHHHhhcCCCCCcHHHHHh--hcCcccccccccCCCCCccCCceeEEEEE
Q 003164 141 EA--VKDVHILDLTWTLPCLHQEYLKKSEDYLAHLLGHEGRGSLHSFLK--GRGWATSISAGVGDEGMHRSSIAYIFVMS 216 (843)
Q Consensus 141 ~~--~~~~~~l~l~~~~p~~~~~~~~~~~~~l~~ll~~~~~~sL~~~L~--~~~l~~~~~~~~~~~~~~~~~~~~~f~i~ 216 (843)
.| +..+..+.++|..++..+.+...++.+|.+.|.+..-..+-+.+. +--++.+++...... -.....+.
T Consensus 269 fp~~Des~G~v~~aW~g~s~sD~~t~~a~~vL~dyls~savapf~~~fVeieDP~assv~f~~~~~------vrc~i~L~ 342 (1022)
T KOG0961|consen 269 FPTDDESRGAVEVAWFGHSPSDLETHSALHVLFDYLSNSAVAPFQKDFVEIEDPLASSVSFHIAEG------VRCDIRLN 342 (1022)
T ss_pred cCCcccccceEEEEEcCCCHHHhhhHHHHHHHHHHhccccccccccceEEecCccccceeeeeecc------cceeEEEe
Confidence 22 335678999999988766555568888999888754444444444 355666666654421 11222222
Q ss_pred EEcCHhhHHhHHHHHHHHHHHHHHHHhcCCchhHHHHHHHhhhcccc-cCCCCChHHHHHHHHHhCCCCCcc-cee----
Q 003164 217 IHLTDSGLEKIFDIIGFVYQYIKLLRQVSPQKWIFKELQDIGNMEFR-FAEEQPQDDYAAELAGNLLIYPAE-HVI---- 290 (843)
Q Consensus 217 ~~l~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~l~~~~~~-~~~---- 290 (843)
+.-. ..+++++....++.-+. .++.|+-+.+..+......++. ......+.+..+.+.....+.+-+ ..+
T Consensus 343 f~gV--P~EKi~~~~~k~l~~l~--et~~iDm~Rm~~~i~~t~~~yL~nlE~n~~s~fms~ii~d~~ygnedg~~l~~~l 418 (1022)
T KOG0961|consen 343 FAGV--PVEKIDECAPKFLDKLV--ETANIDMERMGYLIDQTILNYLVNLETNAPSDFMSHIIGDQLYGNEDGELLKKRL 418 (1022)
T ss_pred ecCC--cHHHhhhhhHHHHHHHH--HhcccCHHHHHHHHHHHHHHHHHhhhcCChHHHHHHHhhhhhccCcchhHHHHHH
Confidence 2221 23566666555444443 3455654333332221111111 011223445555544333322111 111
Q ss_pred ---ecCcccccCCHHHHHHHH-hccCcCceEEEEEeCCCCCCCCCc--ccceeec---ccccccCCHHHHHhhcCCC---
Q 003164 291 ---YGEYMYEVWDEEMIKHLL-GFFMPENMRIDVVSKSFAKSQDFH--YEPWFGS---RYTEEDISPSLMELWRNPP--- 358 (843)
Q Consensus 291 ---~~~~~~~~~~~~~i~~~l-~~l~~~~~~~~~~~~~~~~~~~~~--~~~~~~~---~y~~~~i~~~~~~~~~~~~--- 358 (843)
.....+..+...+..+++ +++..++-.+++..|.+.--+... .+..... .+..+.+- +..+.+.+..
T Consensus 419 k~l~~~~~L~~w~~kdW~~Llnk~Fven~s~tVia~Ps~em~e~i~kE~~~~i~~r~~~lg~~gle-~l~k~L~~ak~~N 497 (1022)
T KOG0961|consen 419 KELDFLKKLKSWPAKDWVQLLNKYFVENPSATVIAVPSEEMVEKIAKEEEKRIAARCEKLGKKGLE-ELGKSLEAAKLEN 497 (1022)
T ss_pred HhHHHHHHHhhccHHHHHHHHHHHhccCCCeEEEecCcHHHHHHHHHHHHHHHHHHHHHhChhhHH-HHHHHHHHhhhcc
Confidence 112334556667788888 566655555566667651000000 0000000 00000000 0111111100
Q ss_pred --CCCCC----CC--CCCCCCCCCCCcccccccCCCCCcCCCCCeEEecCCCeEEEEecCCccCCcceeEEEEEecCCCC
Q 003164 359 --EIDVS----LQ--LPSQNEFIPTDFSIRANDISNDLVTVTSPTCIIDEPLIRFWYKLDNTFKLPRANTYFRINLKGGY 430 (843)
Q Consensus 359 --~~~~~----~~--lp~~~~~i~~~~~~~~~~~~~~~~~~~~p~~~~~~ng~~v~~~~~~~~~~p~~~i~~~~~~~~~~ 430 (843)
..+.. +. -|..-.|. ..+.+.......+.-+...|.+-+.-.......+-++ -|...|.+.+......
T Consensus 498 ~~~~p~~ll~~f~I~~peS~ef~-~~~~v~t~~s~~pfdne~~~~~~T~~~~fp~fi~l~h---~ps~Fvel~fl~dss~ 573 (1022)
T KOG0961|consen 498 TANHPSALLLDFLIVKPESLEFF-DRFPVQTLTSNSPFDNELTPQQSTFLAQFPFFINLHH---CPSKFVELFFLLDSSN 573 (1022)
T ss_pred cCCCCHHHHhheeccCchheeee-eccceeeccCCCCCCccccceeecccccCCceeeccc---CchHHHhHhhhhcccc
Confidence 00000 00 00000000 0011110000000000001111111111122222222 2444555544333333
Q ss_pred CCHHHHHHHHHHHHHHHHH---HH------------HHhH--HhhhcccEeEEEEe---cceeEEEEcccCCCHHHHHHH
Q 003164 431 DNVKNCILTELFIHLLKDE---LN------------EIIY--QASVAKLETSVSIF---SDKLELKVYGFNDKLPVLLSK 490 (843)
Q Consensus 431 ~~~~~~~~~~l~~~~l~~~---~~------------~~~~--~~~~~g~~~~~~~~---~~~~~~~~~g~s~~~~~~l~l 490 (843)
.+.....+..++..++... ++ +... .....+.++..+.. .+=+.+.+++-.++.+...+.
T Consensus 574 i~~sl~pYl~~f~~l~~~~pa~ldgtiptp~~~s~~~v~~~~~s~~id~si~~g~~G~~~~lvn~~Ikv~a~~Y~~~v~W 653 (1022)
T KOG0961|consen 574 ISISLRPYLFLFTDLLFESPAMLDGTIPTPVLTSADDVAKHFTSDLIDHSIQVGVSGLYDRLVNLRIKVGADKYPLLVKW 653 (1022)
T ss_pred CchhhhhHHHHHHHHHhcCHHHhcCCCCcchhhhHHHHHHHHHhhhhhhhhcccccccchhheeEEEEEccCCcchhHHH
Confidence 3344556666777665421 11 0000 01111222222221 244778888889999999999
Q ss_pred HHHHHhcCCCCHHHHHHHHHHHHHHHhcCcCChhhHHHHHHHHhhccCC---CCHHH--HHHHhccCC----------HH
Q 003164 491 ILAIAKSFLPSDDRFKVIKEDVVRTLKNTNMKPLSHSSYLRLQVLCQSF---YDVDE--KLSILHGLS----------LA 555 (843)
Q Consensus 491 l~~~l~~p~~~~~~~~~~k~~~~~~l~~~~~~p~~~~~~~~~~~l~~~~---~~~~~--~~~~l~~it----------~e 555 (843)
+.-.+....||++++-...++++..+.....+.-.++...+...+|+.. ++... .++.++.|. ++
T Consensus 654 i~~~l~~~VfD~~Ri~~~~~~~l~~i~~~KRdg~~vlss~~~~~lY~~~slk~s~d~L~~Ek~l~ei~~~v~n~~~~Il~ 733 (1022)
T KOG0961|consen 654 IQIFLQGVVFDPSRIHQCAQKLLGEIRDRKRDGCTVLSSAVASMLYGKNSLKISFDELVLEKLLEEISKDVMNNPEAILE 733 (1022)
T ss_pred HHHHhhhhccCHHHHHHHHHHHHhhhhhhhcCccEehHHHHHHHHhcccchhhcccHHHHHHHHHHHHHHHhcCHHHHHH
Confidence 9999999999999999998988888887766666666666666776531 22211 222222221 22
Q ss_pred HHHHHHHHHHhhhceeeeeecCCCHHH-HHHHHHHHHhhcCCC-CCCcccc--c--cceeeecCCC-CeEEEEeccCCCC
Q 003164 556 DLMAFIPELRSQLYIEGLCHGNLSQEE-AIHISNIFKSIFSVQ-PLPIEMR--H--QECVICLPSG-ANLVRNVSVKNKC 628 (843)
Q Consensus 556 dl~~~~~~~~~~~~~~~~i~Gdi~~~~-~~~~~~~~~~~l~~~-~~~~~~~--~--~~~~~~~~~~-~~~~~~~~~~~~~ 628 (843)
.+++...-....+.+.+.|+|||+.-+ ...-.+.+......+ |..+... . ........++ +..+ ++. |+
T Consensus 734 ~~e~mR~y~l~~n~~~ihvvgDI~kid~~~~~Wn~l~~~~~~~nP~~~f~~tf~~~~~~s~e~gsssk~~~--I~~--p~ 809 (1022)
T KOG0961|consen 734 KLEQMRSYALFSNGVNIHVVGDIDKIDPKMLSWNWLQADPRFGNPGHQFSATFEAGENVSLELGSSSKELL--IGV--PG 809 (1022)
T ss_pred HHHHHHHHHHhhcceEEEEEeehhcCCccccCchhhhcCcccCCchhhcccccccCcccceeccCCcceeE--ecC--CC
Confidence 333322212345678999999998632 222222222222111 1111000 0 0011112111 2222 222 22
Q ss_pred CCCeEEEEEEeeccccCcccHHHHHHHHHHHHHh---ChhHHHHHhhhccccEEEEeeeeeeCCeeEEEEEEeCCCCChh
Q 003164 629 ETNSVIELYFQIEQEKGMELTRLKALIDLFDEIL---EEPFFNQLRTKEQLGYVVECSPRVTYRVFGFCFCIQSSKYNPI 705 (843)
Q Consensus 629 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l---~s~l~~~LRek~gl~Y~v~~~~~~~~~~~~~~~~i~s~~~~~~ 705 (843)
...+- +++.. +.-..+..+..+...+.++.| .+.+++.||-. ||+|+........++.-++.++ .. .++-
T Consensus 810 sESs~--l~~si-p~~~~w~dpel~~~~l~~~YL~~~eGPfW~~IRG~-GLAYGanm~~~~d~~~~~~~iy--r~-ad~~ 882 (1022)
T KOG0961|consen 810 SESSF--LYQSI-PLDANWNDPELIPAMLFGQYLSQCEGPFWRAIRGD-GLAYGANMFVKPDRKQITLSIY--RC-ADPA 882 (1022)
T ss_pred ccccc--eeeec-ccccccCCcchhHHHHHHHHHHhcccchhhhhccc-chhccceeEEeccCCEEEEEee--cC-CcHH
Confidence 22232 23333 100235677777778888876 58999999986 8999988887776666555444 22 2454
Q ss_pred HHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHcCCC-CChHHHHHHHHH-HHhcCcccccccHHHHHHHhcCCHHH
Q 003164 706 YLQERIDNFISGLDELLEGLDDESFENYRSGLMAKLLEKD-PSLTYESNRFWN-QITDKRYMFDQSQKEAEDLKSIKKND 783 (843)
Q Consensus 706 ~~~~~i~~~~~~~~~~l~~ite~el~~~k~~l~~~~~~~~-~s~~~~~~~~~~-~i~~~~~~~~~~~~~~~~i~~it~ed 783 (843)
+.-+.-..+.+.+..-...+++.+|+-||...+..+..-. -.....++.+.. .+...+ -++...+.++|.++|.+|
T Consensus 883 kaye~~rdiV~~~vsG~~e~s~~~~egAk~s~~~~~~~~Eng~~~~a~~~~~l~~~~q~~--~~fn~~~leri~nvT~~~ 960 (1022)
T KOG0961|consen 883 KAYERTRDIVRKIVSGSGEISKAEFEGAKRSTVFEMMKRENGTVSGAAKISILNNFRQTP--HPFNIDLLERIWNVTSEE 960 (1022)
T ss_pred HHHHHHHHHHHHHhcCceeecHHHhccchHHHHHHHHHHhccceechHHHHHHHHHHhcC--CcccHHHHHHHHHhhHHH
Confidence 3333333333333221136899999999998887775322 233333333322 233222 344557889999999999
Q ss_pred HHHHHHHhhccCCCCcceEEEEEecCCCCcccccc
Q 003164 784 VISWYKTYLQQWSPKCRRLAVRVWGCNTNIKESEK 818 (843)
Q Consensus 784 i~~~a~~~l~~~~~~~~~~~~~v~g~~~~~~~~~~ 818 (843)
+.+.-+.|+.+-...+ ...-.|.--+.+|++-++
T Consensus 961 ~~~~~~~y~~~~Fds~-~~va~i~~hpaKle~~~e 994 (1022)
T KOG0961|consen 961 MVKIGGPYLARLFDSK-CFVASIAVHPAKLEEMKE 994 (1022)
T ss_pred HHHhcccceehhhccc-CceEEEeccHHHHHHHHH
Confidence 9999998886643222 222223333445555433
No 14
>KOG2067 consensus Mitochondrial processing peptidase, alpha subunit [Posttranslational modification, protein turnover, chaperones]
Probab=99.90 E-value=3.4e-21 Score=190.49 Aligned_cols=396 Identities=9% Similarity=0.028 Sum_probs=298.3
Q ss_pred EEecCCCeEEEEecCCccCCcceeEEEEEecCCCCCCHHHHHHHHHHHHHHHHHH-----HHHhHHhhhcccEeEEEEec
Q 003164 396 CIIDEPLIRFWYKLDNTFKLPRANTYFRINLKGGYDNVKNCILTELFIHLLKDEL-----NEIIYQASVAKLETSVSIFS 470 (843)
Q Consensus 396 ~~~~~ng~~v~~~~~~~~~~p~~~i~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----~~~~~~~~~~g~~~~~~~~~ 470 (843)
.-++.||++|.-.+.. .+-..+.+.+.++..++...-.+..+++..+-.++. .+.....+..|..++.+...
T Consensus 27 vttL~NGlkvase~~p---g~f~~vGlyIdsGsrYE~~~~~GisH~lerLAF~ST~~~~~~ei~~~LE~~GGn~~cqsSR 103 (472)
T KOG2067|consen 27 VTTLPNGLKVASENTP---GQFCTVGLYIDSGSRYEAKYFSGISHFLERLAFKSTERFSSKEILAELEKLGGNCDCQSSR 103 (472)
T ss_pred eeecCCccEEeccCCC---CCceEEEEEEecCccccCcCcccHHHHHHHHhhccccCCcHHHHHHHHHHhCCcccccccH
Confidence 4578999999877543 245688888888887776666677777777643321 12223334557788899999
Q ss_pred ceeEEEEcccCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHhcCcCChhhHHHHHHHHhhccC-CC--CHHHHHH
Q 003164 471 DKLELKVYGFNDKLPVLLSKILAIAKSFLPSDDRFKVIKEDVVRTLKNTNMKPLSHSSYLRLQVLCQS-FY--DVDEKLS 547 (843)
Q Consensus 471 ~~~~~~~~g~s~~~~~~l~ll~~~l~~p~~~~~~~~~~k~~~~~~l~~~~~~p~~~~~~~~~~~l~~~-~~--~~~~~~~ 547 (843)
+.....+++.+++++.++++++|.+.+|+|++++++.+|..+.-+++.-..+|.-+..+.+....|.. .. ......+
T Consensus 104 etm~Yaas~~~~~v~sm~~lLadtV~~P~~~d~ev~~~~~~v~~E~~el~~~Pe~lL~e~iH~Aay~~ntlg~pl~cp~~ 183 (472)
T KOG2067|consen 104 ETMMYAASADSDGVDSMVELLADTVLNPKFTDQEVEEARRAVKYEIEELWMRPEPLLTEMIHSAAYSGNTLGLPLLCPEE 183 (472)
T ss_pred hhhHHHHHhhhcccHHHHHHHHHHHhcccccHHHHHHHHHhhhheccccccCchhhHHHHHHHHHhccCcccccccCChh
Confidence 99999999999999999999999999999999999999999888888777788777777666655432 21 1222367
Q ss_pred HhccCCHHHHHHHHHHHHhhhceeeeeecCCCHHHHHHHHHHHHhhcCCCCCCcccccc-c---eeeecCCCCeEEEEec
Q 003164 548 ILHGLSLADLMAFIPELRSQLYIEGLCHGNLSQEEAIHISNIFKSIFSVQPLPIEMRHQ-E---CVICLPSGANLVRNVS 623 (843)
Q Consensus 548 ~l~~it~edl~~~~~~~~~~~~~~~~i~Gdi~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~ 623 (843)
.+..|+.+.+++|.+.+|.|.++++..+| ++.+++.+.++++++.++....|+...+. + -...++.... .+.
T Consensus 184 ~i~~I~~~~l~~yl~~~ytp~rmVlA~vG-V~heelv~~~~~~~~~~~s~~~p~i~~~~aQYtGG~~~~~~d~~---~~~ 259 (472)
T KOG2067|consen 184 NIDKINREVLEEYLKYFYTPERMVLAGVG-VEHEELVEIAEKLLGDLPSTKVPPIDESKAQYTGGELKIDTDAP---QVT 259 (472)
T ss_pred hhhhhhHHHHHHHHHhcCChhheEeeecC-CCHHHHHHHHHHHhccCCccCCCCcccchhhccccccccCCCCc---ccc
Confidence 89999999999999999999999999999 89999999999999999874333211110 0 0011111000 011
Q ss_pred cCCCCCCCeEEEEEEeeccccCcccHHHHHHHHHHHHHh---------------ChhHHHHHhhhccccEEEEeeeeeeC
Q 003164 624 VKNKCETNSVIELYFQIEQEKGMELTRLKALIDLFDEIL---------------EEPFFNQLRTKEQLGYVVECSPRVTY 688 (843)
Q Consensus 624 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l---------------~s~l~~~LRek~gl~Y~v~~~~~~~~ 688 (843)
. +..-+.+++.+-. .++..++.+++.+|+-+| -||||.++=.+....|++-++...+.
T Consensus 260 ~---g~EltHv~lg~Eg----~~~~deD~v~~avLq~lmGGGGSFSAGGPGKGMySrLY~~vLNry~wv~sctAfnhsy~ 332 (472)
T KOG2067|consen 260 G---GPELTHVVLGFEG----CSWNDEDFVALAVLQMLMGGGGSFSAGGPGKGMYSRLYLNVLNRYHWVYSCTAFNHSYS 332 (472)
T ss_pred C---ccceeeeeEeecc----CCCCChhHHHHHHHHHHhcCCcccCCCCCCcchHHHHHHHHHhhhHHHHHhhhhhcccc
Confidence 1 1234445556665 667888999998887765 37999999889999999999888777
Q ss_pred CeeEEEEEEeCCCCChhHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHhcCcccccc
Q 003164 689 RVFGFCFCIQSSKYNPIYLQERIDNFISGLDELLEGLDDESFENYRSGLMAKLLEKDPSLTYESNRFWNQITDKRYMFDQ 768 (843)
Q Consensus 689 ~~~~~~~~i~s~~~~~~~~~~~i~~~~~~~~~~l~~ite~el~~~k~~l~~~~~~~~~s~~~~~~~~~~~i~~~~~~~~~ 768 (843)
+.+-|+++.. ..|+.+.++++.+.+++.....+++++|+++||.++.+.+.++.++-.-.......+++..+ .-..
T Consensus 333 DtGlfgi~~s---~~P~~a~~aveli~~e~~~~~~~v~~~el~RAK~qlkS~LlMNLESR~V~~EDvGRQVL~~g-~rk~ 408 (472)
T KOG2067|consen 333 DTGLFGIYAS---APPQAANDAVELIAKEMINMAGGVTQEELERAKTQLKSMLLMNLESRPVAFEDVGRQVLTTG-ERKP 408 (472)
T ss_pred CCceeEEecc---CCHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHhcccccchhHHHHhHHHHhcc-CcCC
Confidence 7666666643 37999999999999988876678999999999999999999988765555666677777654 2345
Q ss_pred cHHHHHHHhcCCHHHHHHHHHHhhccCCCCcceEEEEEecCCCCccc
Q 003164 769 SQKEAEDLKSIKKNDVISWYKTYLQQWSPKCRRLAVRVWGCNTNIKE 815 (843)
Q Consensus 769 ~~~~~~~i~~it~edi~~~a~~~l~~~~~~~~~~~~~v~g~~~~~~~ 815 (843)
.+++++.|+++|++||.++|.+.|.. +.++.-.|+...++.
T Consensus 409 p~e~~~~Ie~lt~~DI~rva~kvlt~------~p~va~~Gd~~~lpt 449 (472)
T KOG2067|consen 409 PDEFIKKIEQLTPSDISRVASKVLTG------KPSVAAFGDGTGLPT 449 (472)
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHhcC------CceeccCCcccCCcc
Confidence 78899999999999999999999975 578888888755543
No 15
>KOG0960 consensus Mitochondrial processing peptidase, beta subunit, and related enzymes (insulinase superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.89 E-value=4e-22 Score=196.72 Aligned_cols=300 Identities=12% Similarity=0.110 Sum_probs=220.8
Q ss_pred ChhhhcchhccCCcchHHHHHHhhHhHhhhhcCChHHHHHHHHHhhCCCCCCCCccccCcHhhhhhhhhcCccHHHHHHH
Q 003164 1 MRFSQFFISPLMKVEAMEREVLAVDSEFNQALQNDACRLQQLQCHTSQLGHAFNKFFWGNKKSLIGAMEKGINLQEQIMK 80 (843)
Q Consensus 1 ~~~~~~~~~p~~~~~~i~~Er~vV~~E~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~G~~~~l~~~~~~~~~~~~~l~~ 80 (843)
|+++|++.|..|..++|++||++|+.|++....+-..++.+.+-+.+|.++|.++...|..+.|++ ++++||++
T Consensus 131 diLaDIlqns~L~~s~IerER~vILrEmqevd~~~~eVVfdhLHatafQgtPL~~tilGp~enI~s------i~r~DL~~ 204 (467)
T KOG0960|consen 131 DILADILQNSKLEESAIERERDVILREMQEVDKNHQEVVFDHLHATAFQGTPLGRTILGPSENIKS------ISRADLKD 204 (467)
T ss_pred HHHHHHHHhCccchhHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhcCCcccccccChhhhhhh------hhHHHHHH
Confidence 689999999999999999999999999998877777788888888999999999999999999999 89999999
Q ss_pred HHHhccCccccEEEEecCCCHHHHHHHHHHhcccccCCCCCC--CCCCcccccccccceEEEE-EccCceEEEEEEecCC
Q 003164 81 LYMNYYQGGLMKLVVIGGEPLDTLQSWVVELFANVRKGPQIK--PQFTVEGTIWKACKLFRLE-AVKDVHILDLTWTLPC 157 (843)
Q Consensus 81 fy~~~Y~p~nm~lvi~Gd~~~~~~~~~i~~~F~~~~~~~~~~--~~~~~~~p~~~~~~~~~~~-~~~~~~~l~l~~~~p~ 157 (843)
|-++||.+++|+|+-+|.++.+++.+++++|||+++....+. |..+ + +.. .+.-+++. +..+...+.++.-..+
T Consensus 205 yi~thY~~~RmVlaaaGgV~He~lv~la~k~fg~~~~~~~~~~~~~~~-~-~~F-tgsEvR~rdd~lP~a~~AiAVEG~~ 281 (467)
T KOG0960|consen 205 YINTHYKASRMVLAAAGGVKHEELVKLAEKYFGDLSKLQTGDKVPLVP-P-ARF-TGSEVRVRDDDLPLAHIAIAVEGVS 281 (467)
T ss_pred HHHhcccCccEEEEecCCcCHHHHHHHHHHHcCCCcccccCcCCCCCC-C-ccc-cCceeeecCCCCchhheeeeEecCC
Confidence 999999999999999999999999999999999987533222 1111 1 212 22223332 2234455666554433
Q ss_pred -chhhhhcCcHHHHHHhhcCC---------CCCcHHHHHhhcCcccccccccCCCCCccCCceeEEEEEEEcCHhhHHhH
Q 003164 158 -LHQEYLKKSEDYLAHLLGHE---------GRGSLHSFLKGRGWATSISAGVGDEGMHRSSIAYIFVMSIHLTDSGLEKI 227 (843)
Q Consensus 158 -~~~~~~~~~~~~l~~ll~~~---------~~~sL~~~L~~~~l~~~~~~~~~~~~~~~~~~~~~f~i~~~l~~~~~~~~ 227 (843)
.+++ ..++.+.+.++|+- .++.|.+.+.+..++.++.++.. +| .+.++|.+++...+ ...+
T Consensus 282 w~~pD--~~~l~van~iiG~wdr~~g~g~~~~s~La~~~~~~~l~~sfqsFnt--~Y---kDTGLwG~y~V~~~--~~~i 352 (467)
T KOG0960|consen 282 WAHPD--YFALMVANTIIGNWDRTEGGGRNLSSRLAQKIQQDQLCHSFQSFNT--SY---KDTGLWGIYFVTDN--LTMI 352 (467)
T ss_pred cCCcc--HHHHHHHHHHhhhhhcccCCccCCccHHHHHHHHHHHHHHHhhhhc--cc---ccccceeEEEEecC--hhhH
Confidence 3333 36888999999841 11224444555667777665543 22 46788888887642 3689
Q ss_pred HHHHHHHHHHHHHHHhcCCchhHHHHHHHhhhcccccCCCCChHHHHHHHHHhCCCC----CccceeecCcccccCCHHH
Q 003164 228 FDIIGFVYQYIKLLRQVSPQKWIFKELQDIGNMEFRFAEEQPQDDYAAELAGNLLIY----PAEHVIYGEYMYEVWDEEM 303 (843)
Q Consensus 228 ~~~~~~l~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~----~~~~~~~~~~~~~~~~~~~ 303 (843)
+.++..+.+++.+|.. -+++.+++++|+..+.++.... ++....++.++..+..+ ++.++. ..++++|.++
T Consensus 353 ddl~~~vl~eW~rL~~-~vteaEV~RAKn~Lkt~Lll~l-dgttpi~ediGrqlL~~Grri~l~El~---~rId~vt~~~ 427 (467)
T KOG0960|consen 353 DDLIHSVLKEWMRLAT-SVTEAEVERAKNQLKTNLLLSL-DGTTPIAEDIGRQLLTYGRRIPLAELE---ARIDAVTAKD 427 (467)
T ss_pred HHHHHHHHHHHHHHHh-hccHHHHHHHHHHHHHHHHHHh-cCCCchHHHHHHHHhhcCCcCChHHHH---HHHhhccHHH
Confidence 9999999999999987 7899999999988776654332 23334577777777643 444333 3678899999
Q ss_pred HHHHH-hccCcCceEEEEEeC
Q 003164 304 IKHLL-GFFMPENMRIDVVSK 323 (843)
Q Consensus 304 i~~~l-~~l~~~~~~~~~~~~ 323 (843)
|+.++ +++-....-+.-++|
T Consensus 428 Vr~va~k~iyd~~iAia~vG~ 448 (467)
T KOG0960|consen 428 VREVASKYIYDKDIAIAAVGP 448 (467)
T ss_pred HHHHHHHHhhcCCcceeeecc
Confidence 99998 677666655555565
No 16
>PTZ00432 falcilysin; Provisional
Probab=99.85 E-value=1.4e-18 Score=209.10 Aligned_cols=404 Identities=11% Similarity=0.043 Sum_probs=254.6
Q ss_pred ecCCCeEEEEecCCccCCcceeEEEEEecCCCCCCHHHHHHHHHHHHHHHHHHHH-----HhHHhhhcc--cEeEEEEec
Q 003164 398 IDEPLIRFWYKLDNTFKLPRANTYFRINLKGGYDNVKNCILTELFIHLLKDELNE-----IIYQASVAK--LETSVSIFS 470 (843)
Q Consensus 398 ~~~ng~~v~~~~~~~~~~p~~~i~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----~~~~~~~~g--~~~~~~~~~ 470 (843)
...||++|++..++....|...+.+.+..+. ....|+++++.+++..+... ........| ..++.....
T Consensus 96 H~~nGl~vl~~~~~d~~~~~~~f~i~f~T~~----~d~~G~aH~LEH~~f~GS~k~p~~~~~~~l~~~gl~~~lNA~T~~ 171 (1119)
T PTZ00432 96 HKKTGLQVISLKTNDSSGKEMCFDFYVPTPP----HNDKGIPHILEHSVLSGSKKYNYKDSFSLLVQGGFNSFLNAYTFK 171 (1119)
T ss_pred EcCCCCEEEEEecCCCccceeEEEEEecCCC----CCCcchhHHHHHHHhCCCCCCCcccHHHHHHhcCcCCCccccCCC
Confidence 4679999998886532234566777776664 23468899999998654321 111111233 334566667
Q ss_pred ceeEEEEcccCC-CHHHHHHHHHHHHhcCCCCHHHH--HH---------H--------------------HHHHHHHHhc
Q 003164 471 DKLELKVYGFND-KLPVLLSKILAIAKSFLPSDDRF--KV---------I--------------------KEDVVRTLKN 518 (843)
Q Consensus 471 ~~~~~~~~g~s~-~~~~~l~ll~~~l~~p~~~~~~~--~~---------~--------------------k~~~~~~l~~ 518 (843)
+.+.+.+.+.++ ++..+++++.+.+.+|.++++.+ .+ . +..+.++++.
T Consensus 172 D~T~Y~~~~~~e~d~~~~ldv~~d~v~~P~~~~~~~~f~qEgwh~E~~~~~~~~~~~~e~~~~~~~~l~~kgVV~~Emk~ 251 (1119)
T PTZ00432 172 DRTSYLFASTNEKDFYNTADVYMDSVFQPNILEDKDIFKQEGWHYKVTKLKDDEKNADELGNVHDRHVSYSGIVYSEMKK 251 (1119)
T ss_pred CceEEEeccCCHHHHHHHHHHHHHHHhCcCcccccchhhhhhhhccccccccccccccccccccccccchhhHHHHHHHH
Confidence 888999988875 69999999999999999988753 21 1 5668889998
Q ss_pred CcCChhhHHHHHHHHhhccCCCC--HHHHHHHhccCCHHHHHHHHHHHHhhhceeeeeecCCCHHHHHHHHHHHHhhcCC
Q 003164 519 TNMKPLSHSSYLRLQVLCQSFYD--VDEKLSILHGLSLADLMAFIPELRSQLYIEGLCHGNLSQEEAIHISNIFKSIFSV 596 (843)
Q Consensus 519 ~~~~p~~~~~~~~~~~l~~~~~~--~~~~~~~l~~it~edl~~~~~~~~~~~~~~~~i~Gdi~~~~~~~~~~~~~~~l~~ 596 (843)
..++|..++.+.+.+.+++++|. ..|..+.|.++|++++++||+++|.|.|+.++|+||++.+++.++++++++.++.
T Consensus 252 ~~~~p~~~~~~~~~~~lf~~pY~~~~~G~~~~I~~lt~e~l~~Fh~~~Y~P~N~~l~v~Gdid~~~~l~~l~~~f~~~~~ 331 (1119)
T PTZ00432 252 RFSDPLSFGYSVIYQNLFSNVYKYDSGGDPKDIVELTYEELVEFYKTYYGPKTATVYFYGPNDVTERLEFVDNYLTKHPK 331 (1119)
T ss_pred hhCCHHHHHHHHHHHHHhCCCCCCCCCCChHhhccCCHHHHHHHHHHhcCccceEEEEEcCCCHHHHHHHHHHHHhhccc
Confidence 88899999999887766665654 5678999999999999999999999999999999999999999999999988865
Q ss_pred CCCCc-cccccceeeecC-----CCCeEEEEeccCCCCCCCeEEEEE-Eeecccc-C-------cccHHHHHHHHHHHHH
Q 003164 597 QPLPI-EMRHQECVICLP-----SGANLVRNVSVKNKCETNSVIELY-FQIEQEK-G-------MELTRLKALIDLFDEI 661 (843)
Q Consensus 597 ~~~~~-~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~-------~~~~~~~~~~~ll~~~ 661 (843)
..... ...+.......+ .+...+ ......+...+..++++ |.+++.. + ..++.+..++.+|+.+
T Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v-~~~~~~~~~e~~~l~~~~w~~~p~~~~~~~~~~~~~d~~~~~AL~VLs~l 410 (1119)
T PTZ00432 332 TGQLSHTAYREDADENLLYEEYKDKPKHV-KKKFSSHSEEEENLMSVSWLLNPKHNGSKDYDKSLIDPVDYLALLVLNYL 410 (1119)
T ss_pred ccccccccccccccccccccccccCCeEE-EeccCCCccccccEEEEEEEcCCccccccccccccCCHHHHHHHHHHHHH
Confidence 31100 000000000000 111111 11111112224444444 7662100 0 1235778888888888
Q ss_pred h----ChhHHHHHhhhccccEEE-EeeeeeeCCeeEEEEEEeCCC-CC----hhHHHHHHHHHHHHHHHHH-hcCCHHHH
Q 003164 662 L----EEPFFNQLRTKEQLGYVV-ECSPRVTYRVFGFCFCIQSSK-YN----PIYLQERIDNFISGLDELL-EGLDDESF 730 (843)
Q Consensus 662 l----~s~l~~~LRek~gl~Y~v-~~~~~~~~~~~~~~~~i~s~~-~~----~~~~~~~i~~~~~~~~~~l-~~ite~el 730 (843)
| +|+|+++||+ .|++|++ ++++......+.+.+++.... .+ ++.+++.++.+.+.+.++. +|++++++
T Consensus 411 Lggg~sS~L~q~LrE-~GLa~svv~~~~~~~~~~~~f~I~l~g~~~~~~~~~~~~~~ev~~~I~~~L~~l~~eGi~~eel 489 (1119)
T PTZ00432 411 LLGTPESVLYKALID-SGLGKKVVGSGLDDYFKQSIFSIGLKGIKETNEKRKDKVHYTFEKVVLNALTKVVTEGFNKSAV 489 (1119)
T ss_pred HcCCCccHHHHHHHh-cCCCcCCCcCcccCCCCceEEEEEEEcCChHhccchhhhHHHHHHHHHHHHHHHHHhCCCHHHH
Confidence 7 6899999996 7999995 445544444555556665321 11 1224445555555555544 79999999
Q ss_pred HHHHHHHHHHHcCCCCC--h--HHHHHHHHHHHhcCcccccc--cHHHHHHHhc---CCHHHHHHHHHHhhccCCCCcce
Q 003164 731 ENYRSGLMAKLLEKDPS--L--TYESNRFWNQITDKRYMFDQ--SQKEAEDLKS---IKKNDVISWYKTYLQQWSPKCRR 801 (843)
Q Consensus 731 ~~~k~~l~~~~~~~~~s--~--~~~~~~~~~~i~~~~~~~~~--~~~~~~~i~~---it~edi~~~a~~~l~~~~~~~~~ 801 (843)
++++.++.-++...... + ...+......++.+.-+++. .+...+.++. -+..-+.++.++||-. +..+
T Consensus 490 e~a~~qlef~~rE~~~~~~p~gl~~~~~~~~~~~~g~dp~~~l~~~~~l~~lr~~~~~~~~y~e~Li~k~ll~---N~h~ 566 (1119)
T PTZ00432 490 EASLNNIEFVMKELNLGTYPKGLMLIFLMQSRLQYGKDPFEILRFEKLLNELKLRIDNESKYLEKLIEKHLLN---NNHR 566 (1119)
T ss_pred HHHHHHHHHHhhhccCCCCCcHHHHHHHHHHHHhcCCCHHHHHhhHHHHHHHHHHHhcccHHHHHHHHHHccC---CCee
Confidence 99999888777643211 1 11111111122222223332 1222333322 2335699999999964 2456
Q ss_pred EEEEEecCC
Q 003164 802 LAVRVWGCN 810 (843)
Q Consensus 802 ~~~~v~g~~ 810 (843)
..+++.|++
T Consensus 567 ~~v~~~p~~ 575 (1119)
T PTZ00432 567 VTVHLEAVE 575 (1119)
T ss_pred eEEEEecCC
Confidence 777788887
No 17
>PF05193 Peptidase_M16_C: Peptidase M16 inactive domain; InterPro: IPR007863 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. These metallopeptidases belong to MEROPS peptidase family M16 (clan ME). They include proteins, which are classified as non-peptidase homologues either have been found experimentally to be without peptidase activity, or lack amino acid residues that are believed to be essential for the catalytic activity. The peptidases in this group of sequences include: Insulinase, insulin-degrading enzyme (3.4.24.56 from EC) Mitochondrial processing peptidase alpha subunit, (Alpha-MPP, 3.4.24.64 from EC) Pitrlysin, Protease III precursor (3.4.24.55 from EC) Nardilysin, (3.4.24.61 from EC) Ubiquinol-cytochrome C reductase complex core protein I,mitochondrial precursor (1.10.2.2 from EC) Coenzyme PQQ synthesis protein F (3.4.99 from EC) These proteins do not share many regions of sequence similarity; the most noticeable is in the N-terminal section. This region includes a conserved histidine followed, two residues later by a glutamate and another histidine. In pitrilysin, it has been shown [] that this H-x-x-E-H motif is involved in enzymatic activity; the two histidines bind zinc and the glutamate is necessary for catalytic activity. The mitochondrial processing peptidase consists of two structurally related domains. One is the active peptidase whereas the other, the C-terminal region, is inactive. The two domains hold the substrate like a clamp [].; GO: 0004222 metalloendopeptidase activity, 0008270 zinc ion binding, 0006508 proteolysis; PDB: 1BE3_B 1PP9_B 2A06_B 1SQB_B 1SQP_B 1L0N_B 1SQX_B 1NU1_B 1L0L_B 2FYU_B ....
Probab=99.78 E-value=3.7e-18 Score=166.43 Aligned_cols=176 Identities=20% Similarity=0.240 Sum_probs=134.0
Q ss_pred cHHHHHHHHHHhccCccccEEEEecCCCHHHHHHHHHHhcccccCCC---CCCCCCCccccc-ccccceEEEEEcc-Cce
Q 003164 73 NLQEQIMKLYMNYYQGGLMKLVVIGGEPLDTLQSWVVELFANVRKGP---QIKPQFTVEGTI-WKACKLFRLEAVK-DVH 147 (843)
Q Consensus 73 ~~~~~l~~fy~~~Y~p~nm~lvi~Gd~~~~~~~~~i~~~F~~~~~~~---~~~~~~~~~~p~-~~~~~~~~~~~~~-~~~ 147 (843)
++.++|++||++||+|+||+|+|+||+++++++++|+++|+.|+... .+.+... ..+. ....+.+...... ...
T Consensus 2 it~e~l~~f~~~~y~p~n~~l~i~Gd~~~~~~~~~i~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 80 (184)
T PF05193_consen 2 ITLEDLRAFYKKFYRPSNMTLVIVGDIDPDELEKLIEKYFGSLPKSSIPPKPKPRSP-PLPPSEPQGKEIVIPSKDESQS 80 (184)
T ss_dssp --HHHHHHHHHHHSSGGGEEEEEEESSGHHHHHHHHHHHHTTSSHSCHGGSSSCSSS-SSSCGGSSEEEEEEEESSSSSE
T ss_pred CCHHHHHHHHHHhcCccceEEEEEcCccHHHHHHHHHhhhhhhcccccccccccccc-cccccccccccccccccccccc
Confidence 68999999999999999999999999999999999999999998653 1221111 1111 1122223333322 578
Q ss_pred EEEEEEecCCchhhhhcCcHHHHHHhhcCCCCCcHHHHHh-hcCcccccccccCCCCCccCCceeEEEEEEEcCHhhHHh
Q 003164 148 ILDLTWTLPCLHQEYLKKSEDYLAHLLGHEGRGSLHSFLK-GRGWATSISAGVGDEGMHRSSIAYIFVMSIHLTDSGLEK 226 (843)
Q Consensus 148 ~l~l~~~~p~~~~~~~~~~~~~l~~ll~~~~~~sL~~~L~-~~~l~~~~~~~~~~~~~~~~~~~~~f~i~~~l~~~~~~~ 226 (843)
.+.+.|+.|......+..++.+++.+|++...++|+..|| ++|+++++.++.... ...+.|.+.+.++.. +
T Consensus 81 ~v~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~s~l~~~lr~~~~l~y~v~~~~~~~-----~~~~~~~i~~~~~~~---~ 152 (184)
T PF05193_consen 81 IVSIAFPGPPIKDSKDYFALNLLSSLLGNGMSSRLFQELREKQGLAYSVSASNSSY-----RDSGLFSISFQVTPE---N 152 (184)
T ss_dssp EEEEEEEEEETGTSTTHHHHHHHHHHHHCSTTSHHHHHHHTTTTSESEEEEEEEEE-----SSEEEEEEEEEEEGG---G
T ss_pred ccccccccccccccchhhHHHHHHHHHhcCccchhHHHHHhccccceEEEeeeecc-----ccceEEEEEEEcCcc---c
Confidence 8999999987622334468999999999988889999999 799999988874421 256788888888763 7
Q ss_pred HHHHHHHHHHHHHHHHhcCCchhHHHHHHHh
Q 003164 227 IFDIIGFVYQYIKLLRQVSPQKWIFKELQDI 257 (843)
Q Consensus 227 ~~~~~~~l~~~l~~l~~~~~~~~~~~~~~~~ 257 (843)
++++++.++++++++++.|+++++++++++.
T Consensus 153 ~~~~~~~~~~~l~~l~~~~~s~~el~~~k~~ 183 (184)
T PF05193_consen 153 LDEAIEAILQELKRLREGGISEEELERAKNQ 183 (184)
T ss_dssp HHHHHHHHHHHHHHHHHHCS-HHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHHHHHHhc
Confidence 8999999999999999999999999988764
No 18
>PF05193 Peptidase_M16_C: Peptidase M16 inactive domain; InterPro: IPR007863 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. These metallopeptidases belong to MEROPS peptidase family M16 (clan ME). They include proteins, which are classified as non-peptidase homologues either have been found experimentally to be without peptidase activity, or lack amino acid residues that are believed to be essential for the catalytic activity. The peptidases in this group of sequences include: Insulinase, insulin-degrading enzyme (3.4.24.56 from EC) Mitochondrial processing peptidase alpha subunit, (Alpha-MPP, 3.4.24.64 from EC) Pitrlysin, Protease III precursor (3.4.24.55 from EC) Nardilysin, (3.4.24.61 from EC) Ubiquinol-cytochrome C reductase complex core protein I,mitochondrial precursor (1.10.2.2 from EC) Coenzyme PQQ synthesis protein F (3.4.99 from EC) These proteins do not share many regions of sequence similarity; the most noticeable is in the N-terminal section. This region includes a conserved histidine followed, two residues later by a glutamate and another histidine. In pitrilysin, it has been shown [] that this H-x-x-E-H motif is involved in enzymatic activity; the two histidines bind zinc and the glutamate is necessary for catalytic activity. The mitochondrial processing peptidase consists of two structurally related domains. One is the active peptidase whereas the other, the C-terminal region, is inactive. The two domains hold the substrate like a clamp [].; GO: 0004222 metalloendopeptidase activity, 0008270 zinc ion binding, 0006508 proteolysis; PDB: 1BE3_B 1PP9_B 2A06_B 1SQB_B 1SQP_B 1L0N_B 1SQX_B 1NU1_B 1L0L_B 2FYU_B ....
Probab=99.69 E-value=5.2e-16 Score=151.18 Aligned_cols=175 Identities=22% Similarity=0.307 Sum_probs=123.4
Q ss_pred cCCHHHHHHHHHHHHhhhceeeeeecCCCHHHHHHHHHHHHhhcCCCC---CCccccccceeeecCCCCeEEEEeccCCC
Q 003164 551 GLSLADLMAFIPELRSQLYIEGLCHGNLSQEEAIHISNIFKSIFSVQP---LPIEMRHQECVICLPSGANLVRNVSVKNK 627 (843)
Q Consensus 551 ~it~edl~~~~~~~~~~~~~~~~i~Gdi~~~~~~~~~~~~~~~l~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 627 (843)
++|.+++++||+++|.|.|++++|+||++.+++.++++++++.++... .+.. .........+.....+ ... .
T Consensus 1 ~it~e~l~~f~~~~y~p~n~~l~i~Gd~~~~~~~~~i~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~-~-- 75 (184)
T PF05193_consen 1 NITLEDLRAFYKKFYRPSNMTLVIVGDIDPDELEKLIEKYFGSLPKSSIPPKPKP-RSPPLPPSEPQGKEIV-IPS-K-- 75 (184)
T ss_dssp C--HHHHHHHHHHHSSGGGEEEEEEESSGHHHHHHHHHHHHTTSSHSCHGGSSSC-SSSSSSCGGSSEEEEE-EEE-S--
T ss_pred CCCHHHHHHHHHHhcCccceEEEEEcCccHHHHHHHHHhhhhhhccccccccccc-cccccccccccccccc-ccc-c--
Confidence 478999999999999999999999999999999999999999998643 1110 0000011111111122 121 1
Q ss_pred CCCCeEEEEEEeeccccCcc-cHHHHHHHHHHHHHh----ChhHHHHHhhhccccEEEEeeeeeeCCeeEEEEEEeCCCC
Q 003164 628 CETNSVIELYFQIEQEKGME-LTRLKALIDLFDEIL----EEPFFNQLRTKEQLGYVVECSPRVTYRVFGFCFCIQSSKY 702 (843)
Q Consensus 628 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ll~~~l----~s~l~~~LRek~gl~Y~v~~~~~~~~~~~~~~~~i~s~~~ 702 (843)
...+..+.++|+. +.. +.++...+.++..+| +++|+..||+++|++|+++++.....+.+.+.+++.+
T Consensus 76 ~~~~~~v~~~~~~----~~~~~~~~~~~~~~l~~~l~~~~~s~l~~~lr~~~~l~y~v~~~~~~~~~~~~~~i~~~~--- 148 (184)
T PF05193_consen 76 DESQSIVSIAFPG----PPIKDSKDYFALNLLSSLLGNGMSSRLFQELREKQGLAYSVSASNSSYRDSGLFSISFQV--- 148 (184)
T ss_dssp SSSSEEEEEEEEE----EETGTSTTHHHHHHHHHHHHCSTTSHHHHHHHTTTTSESEEEEEEEEESSEEEEEEEEEE---
T ss_pred ccccccccccccc----ccccccchhhHHHHHHHHHhcCccchhHHHHHhccccceEEEeeeeccccceEEEEEEEc---
Confidence 1267777788887 444 566666666666665 5679999999999999999997766655555566654
Q ss_pred ChhHHHHHHHHHHHHHHHHH-hcCCHHHHHHHHHHH
Q 003164 703 NPIYLQERIDNFISGLDELL-EGLDDESFENYRSGL 737 (843)
Q Consensus 703 ~~~~~~~~i~~~~~~~~~~l-~~ite~el~~~k~~l 737 (843)
.++++.++++.+.+.+..+. .+++++||+++|++|
T Consensus 149 ~~~~~~~~~~~~~~~l~~l~~~~~s~~el~~~k~~L 184 (184)
T PF05193_consen 149 TPENLDEAIEAILQELKRLREGGISEEELERAKNQL 184 (184)
T ss_dssp EGGGHHHHHHHHHHHHHHHHHHCS-HHHHHHHHHHH
T ss_pred CcccHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhcC
Confidence 45577788888888887776 579999999999875
No 19
>KOG2067 consensus Mitochondrial processing peptidase, alpha subunit [Posttranslational modification, protein turnover, chaperones]
Probab=99.63 E-value=1.1e-14 Score=144.75 Aligned_cols=291 Identities=12% Similarity=0.057 Sum_probs=208.0
Q ss_pred hhhhcchhccCCcchHHHHHHhhHhHhhhhcCChHHHHHHHHHhhCCCCCCCCccccCcHhhhhhhhhcCccHHHHHHHH
Q 003164 2 RFSQFFISPLMKVEAMEREVLAVDSEFNQALQNDACRLQQLQCHTSQLGHAFNKFFWGNKKSLIGAMEKGINLQEQIMKL 81 (843)
Q Consensus 2 ~~~~~~~~p~~~~~~i~~Er~vV~~E~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~G~~~~l~~~~~~~~~~~~~l~~f 81 (843)
+++|-+.+|.|++++++.+|..|.=|...--..|+-.+.+++-.++|.+.+.+.+-.+..+.|.. ++++.|.+|
T Consensus 123 lLadtV~~P~~~d~ev~~~~~~v~~E~~el~~~Pe~lL~e~iH~Aay~~ntlg~pl~cp~~~i~~------I~~~~l~~y 196 (472)
T KOG2067|consen 123 LLADTVLNPKFTDQEVEEARRAVKYEIEELWMRPEPLLTEMIHSAAYSGNTLGLPLLCPEENIDK------INREVLEEY 196 (472)
T ss_pred HHHHHHhcccccHHHHHHHHHhhhheccccccCchhhHHHHHHHHHhccCcccccccCChhhhhh------hhHHHHHHH
Confidence 57899999999999999999999888776666788888888888888888888777888888998 899999999
Q ss_pred HHhccCccccEEEEecCCCHHHHHHHHHHhcccccCCCCCCCCCCcccccc-ccc--ce---EEEEE-ccCceEEEEEEe
Q 003164 82 YMNYYQGGLMKLVVIGGEPLDTLQSWVVELFANVRKGPQIKPQFTVEGTIW-KAC--KL---FRLEA-VKDVHILDLTWT 154 (843)
Q Consensus 82 y~~~Y~p~nm~lvi~Gd~~~~~~~~~i~~~F~~~~~~~~~~~~~~~~~p~~-~~~--~~---~~~~~-~~~~~~l~l~~~ 154 (843)
-+.||+|++|+|.-+| ++.+++.+.++++|+++|+...|+...+ +.. .++ ++ +...+ .....++.+.|-
T Consensus 197 l~~~ytp~rmVlA~vG-V~heelv~~~~~~~~~~~s~~~p~i~~~---~aQYtGG~~~~~~d~~~~~~g~EltHv~lg~E 272 (472)
T KOG2067|consen 197 LKYFYTPERMVLAGVG-VEHEELVEIAEKLLGDLPSTKVPPIDES---KAQYTGGELKIDTDAPQVTGGPELTHVVLGFE 272 (472)
T ss_pred HHhcCChhheEeeecC-CCHHHHHHHHHHHhccCCccCCCCcccc---hhhccccccccCCCCccccCccceeeeeEeec
Confidence 9999999999999988 6778999999999999998543332211 111 111 00 00111 124567888888
Q ss_pred cCCchhhhhcCcHHHHHHhhcCCCCC-------cHHHHHh-----hcCcccccccccCCCCCccCCceeEEEEEEEcCHh
Q 003164 155 LPCLHQEYLKKSEDYLAHLLGHEGRG-------SLHSFLK-----GRGWATSISAGVGDEGMHRSSIAYIFVMSIHLTDS 222 (843)
Q Consensus 155 ~p~~~~~~~~~~~~~l~~ll~~~~~~-------sL~~~L~-----~~~l~~~~~~~~~~~~~~~~~~~~~f~i~~~l~~~ 222 (843)
.++..+. +..++.+|+.|+|++++= .+|++|. +..|++++.++... | ++.++|.|.+...+.
T Consensus 273 g~~~~de-D~v~~avLq~lmGGGGSFSAGGPGKGMySrLY~~vLNry~wv~sctAfnhs--y---~DtGlfgi~~s~~P~ 346 (472)
T KOG2067|consen 273 GCSWNDE-DFVALAVLQMLMGGGGSFSAGGPGKGMYSRLYLNVLNRYHWVYSCTAFNHS--Y---SDTGLFGIYASAPPQ 346 (472)
T ss_pred cCCCCCh-hHHHHHHHHHHhcCCcccCCCCCCcchHHHHHHHHHhhhHHHHHhhhhhcc--c---cCCceeEEeccCCHH
Confidence 7665432 557999999999976431 2455543 46799988776543 2 467899999888774
Q ss_pred hHHhHHHHHHHHHHHHHHHHhcCCchhHHHHHHHhhhcccccCCCCChHHHHHHHHHhCCC----CCccceeecCccccc
Q 003164 223 GLEKIFDIIGFVYQYIKLLRQVSPQKWIFKELQDIGNMEFRFAEEQPQDDYAAELAGNLLI----YPAEHVIYGEYMYEV 298 (843)
Q Consensus 223 ~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~----~~~~~~~~~~~~~~~ 298 (843)
...+++..+-.++-.+.. ++++++++++|...+..... +.++-.-.++.++.++.. .+|++.+. .+++
T Consensus 347 ---~a~~aveli~~e~~~~~~-~v~~~el~RAK~qlkS~LlM-NLESR~V~~EDvGRQVL~~g~rk~p~e~~~---~Ie~ 418 (472)
T KOG2067|consen 347 ---AANDAVELIAKEMINMAG-GVTQEELERAKTQLKSMLLM-NLESRPVAFEDVGRQVLTTGERKPPDEFIK---KIEQ 418 (472)
T ss_pred ---HHHHHHHHHHHHHHHHhC-CCCHHHHHHHHHHHHHHHHh-cccccchhHHHHhHHHHhccCcCCHHHHHH---HHHh
Confidence 566777777788887765 58999999998877655432 222222334455544432 35555444 4678
Q ss_pred CCHHHHHHHHhccCcCce
Q 003164 299 WDEEMIKHLLGFFMPENM 316 (843)
Q Consensus 299 ~~~~~i~~~l~~l~~~~~ 316 (843)
+++++|.++.+.+-..+.
T Consensus 419 lt~~DI~rva~kvlt~~p 436 (472)
T KOG2067|consen 419 LTPSDISRVASKVLTGKP 436 (472)
T ss_pred cCHHHHHHHHHHHhcCCc
Confidence 899999999865444443
No 20
>COG1026 Predicted Zn-dependent peptidases, insulinase-like [General function prediction only]
Probab=99.49 E-value=9.5e-12 Score=139.96 Aligned_cols=388 Identities=16% Similarity=0.095 Sum_probs=240.0
Q ss_pred CCCeEEEEecCCccCCcceeEEEEEecCCCCCCHHHHHHHHHHHHHH-----------------HHHHHHHhHHhhhccc
Q 003164 400 EPLIRFWYKLDNTFKLPRANTYFRINLKGGYDNVKNCILTELFIHLL-----------------KDELNEIIYQASVAKL 462 (843)
Q Consensus 400 ~ng~~v~~~~~~~~~~p~~~i~~~~~~~~~~~~~~~~~~~~l~~~~l-----------------~~~~~~~~~~~~~~g~ 462 (843)
..|+++.+..++. |...++|.|......+ .|.++++.++. +.+++.... +..
T Consensus 28 ~TGa~l~hi~~~d---~~~vFsi~F~T~p~ds----tGVaHiLEHtvlcGS~kYPvkdPF~~ml~rSLntF~N--A~T-- 96 (978)
T COG1026 28 KTGAELAHIKNED---PNNVFSIAFKTEPHDS----TGVAHILEHTVLCGSKKYPVKDPFFKMLKRSLNTFLN--AFT-- 96 (978)
T ss_pred cCCceEEEecCCC---cCceEEEEeecCCCCC----CCcchHHHHHhhhCCCCCCCCChHHHHHHHhHHHHHh--hcc--
Confidence 3799988887653 6788999998765432 34555555542 222221110 111
Q ss_pred EeEEEEecceeEEEEccc-CCCHHHHHHHHHHHHhcCCCCHHHHHHHH--------------HHHHHHHhcCcCChhhHH
Q 003164 463 ETSVSIFSDKLELKVYGF-NDKLPVLLSKILAIAKSFLPSDDRFKVIK--------------EDVVRTLKNTNMKPLSHS 527 (843)
Q Consensus 463 ~~~~~~~~~~~~~~~~g~-s~~~~~~l~ll~~~l~~p~~~~~~~~~~k--------------~~~~~~l~~~~~~p~~~~ 527 (843)
..+....-++.. .+++-.++...+|.+.+|...++.|.++- -.+-++.+....+|..+.
T Consensus 97 ------~~D~T~YP~sS~~~~Df~NLl~VYlDavf~PlL~~e~F~QEgwr~e~~~~~~l~~~GVVyNEMKGa~ss~~~~~ 170 (978)
T COG1026 97 ------FPDKTVYPASSANEKDFYNLLSVYLDAVFHPLLTKESFLQEGWRIEFKDESNLKYKGVVYNEMKGAYSSGESVL 170 (978)
T ss_pred ------CCCcceeeccccCcchHHHHHHHHHHhhhCcccchHHHhhhhhccccCCCccceeeeEEeehhcccccCchhHH
Confidence 123333333333 56899999999999999999888886542 223456666666888899
Q ss_pred HHHHHHhhccC-CC--CHHHHHHHhccCCHHHHHHHHHHHHhhhceeeeeecCCCHHHHHHHHHHH-HhhcCCCCCCccc
Q 003164 528 SYLRLQVLCQS-FY--DVDEKLSILHGLSLADLMAFIPELRSQLYIEGLCHGNLSQEEAIHISNIF-KSIFSVQPLPIEM 603 (843)
Q Consensus 528 ~~~~~~~l~~~-~~--~~~~~~~~l~~it~edl~~~~~~~~~~~~~~~~i~Gdi~~~~~~~~~~~~-~~~l~~~~~~~~~ 603 (843)
++.+.+.+++. .| ..-|....|..+|+|++++||+++|.|+|+.++++||++.++....++.. +...+.... ...
T Consensus 171 ~~~~~~slfp~~ty~~~SGG~P~~I~~LtyE~~r~FHkk~Y~pSN~~i~~yGni~~~~~L~~iee~~l~~~~k~~~-~~~ 249 (978)
T COG1026 171 SRAMQQSLFPGTTYGVNSGGDPKNIPDLTYEEFRAFHKKHYHPSNCKIFVYGNIPTERLLDFIEEKVLRPFGKREL-DVP 249 (978)
T ss_pred HHHHHHhhCCCccccccCCCCcccccccCHHHHHHHHHHhCCccceEEEEECCCCHHHHHHHHHHhhhcccccccc-CCC
Confidence 99998888753 22 33446788999999999999999999999999999999999999988875 444443221 111
Q ss_pred cccceeeecCCCCeEEEEeccCCCCCCCeEEEEEEeeccccCc-ccHHHHHHHHHHHHHh----ChhHHHHHhhhcccc-
Q 003164 604 RHQECVICLPSGANLVRNVSVKNKCETNSVIELYFQIEQEKGM-ELTRLKALIDLFDEIL----EEPFFNQLRTKEQLG- 677 (843)
Q Consensus 604 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ll~~~l----~s~l~~~LRek~gl~- 677 (843)
++......-+......+.+.-+..+..+..+.+.|.+ +. .+.++..++.+|..+| .+.|.+.|-|- |+|
T Consensus 250 i~~~~~~~~~~~~~~~ypi~~~~~de~q~~~~lsWl~----~~~~d~~~~lal~vL~~iLl~~~asPl~~~lies-glg~ 324 (978)
T COG1026 250 IPDQKAFKKPRRKVLEYPISFDEEDEDQGLLSLSWLG----GSASDAEDSLALEVLEEILLDSAASPLTQALIES-GLGF 324 (978)
T ss_pred CCcccccCcccccceeeccCCCCCCCceeEEEEEEec----CCcccHHHHHHHHHHHHHHccCcccHHHHHHHHc-CCCc
Confidence 2222222222222222223212223467777778887 55 6788899999999997 46799999975 788
Q ss_pred EEEEeeeeeeCCeeEEEEEEeCCCCChhHHHHHHHHHHHHHHHHH-hcCCHHHHHHHHHHHHHHHcCCCCChHHHHH--H
Q 003164 678 YVVECSPRVTYRVFGFCFCIQSSKYNPIYLQERIDNFISGLDELL-EGLDDESFENYRSGLMAKLLEKDPSLTYESN--R 754 (843)
Q Consensus 678 Y~v~~~~~~~~~~~~~~~~i~s~~~~~~~~~~~i~~~~~~~~~~l-~~ite~el~~~k~~l~~~~~~~~~s~~~~~~--~ 754 (843)
+.+...+........+.+.+++ +..+.+++.=+.++..++++. +++..+.++.++.++.-++......+.+.+- .
T Consensus 325 ~~~~g~~~~~~~~~~f~v~~~g--v~~ek~~~~k~lV~~~L~~l~~~gi~~~~ie~~~~q~E~s~ke~~s~pfgl~l~~~ 402 (978)
T COG1026 325 ADVSGSYDSDLKETIFSVGLKG--VSEEKIAKLKNLVLSTLKELVKNGIDKKLIEAILHQLEFSLKEVKSYPFGLGLMFR 402 (978)
T ss_pred ccccceeccccceeEEEEEecC--CCHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhhhhhcCCCccHHHHHH
Confidence 5444434443333445556655 344444444444444444443 7899999999998877776653333322211 1
Q ss_pred HHHHHhcCccccccc--HHHHHHHhc-CCHHH-HHHHHHHhhccCCCCcceEEEEEecCCCCccc
Q 003164 755 FWNQITDKRYMFDQS--QKEAEDLKS-IKKND-VISWYKTYLQQWSPKCRRLAVRVWGCNTNIKE 815 (843)
Q Consensus 755 ~~~~i~~~~~~~~~~--~~~~~~i~~-it~ed-i~~~a~~~l~~~~~~~~~~~~~v~g~~~~~~~ 815 (843)
.....+.|.-+++.+ ....+.+++ +.... +.++.++||-.. .....+.+.++++-.++
T Consensus 403 ~~~gw~~G~dp~~~Lr~~~~~~~Lr~~le~~~~fe~LI~ky~l~N---~h~~~v~~~Ps~~~~~~ 464 (978)
T COG1026 403 SLYGWLNGGDPEDSLRFLDYLQNLREKLEKGPYFEKLIRKYFLDN---PHYVTVIVLPSPELEEK 464 (978)
T ss_pred hccccccCCChhhhhhhHHHHHHHHHhhhcChHHHHHHHHHhhcC---CccEEEEEecChHHHHH
Confidence 111222333334332 234555544 44444 999999999652 34677777776554443
No 21
>COG1025 Ptr Secreted/periplasmic Zn-dependent peptidases, insulinase-like [Posttranslational modification, protein turnover, chaperones]
Probab=99.49 E-value=2.4e-11 Score=136.23 Aligned_cols=402 Identities=11% Similarity=0.019 Sum_probs=249.0
Q ss_pred eEEecCCCeEEEEecCCccCCcceeEEEEEecCCCCCCHHHHHHHHHHHHHHHHHHHHH----hHHhh--hcccEeEEEE
Q 003164 395 TCIIDEPLIRFWYKLDNTFKLPRANTYFRINLKGGYDNVKNCILTELFIHLLKDELNEI----IYQAS--VAKLETSVSI 468 (843)
Q Consensus 395 ~~~~~~ng~~v~~~~~~~~~~p~~~i~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~----~~~~~--~~g~~~~~~~ 468 (843)
..+.+.||+++.+..|+. .++....+.+..|...++.+..|+++++.+|+-.+..++ .+... .-|.+.....
T Consensus 25 ~~I~LpNGl~~LlisDP~--a~ks~aAL~V~vGs~~DP~e~~GLAHflEHmlfmGseKYP~~~~f~~fLskhgGs~NA~T 102 (937)
T COG1025 25 RAIKLPNGLRALLVSDPQ--ADKSSAALVVPVGSFDDPEEYPGLAHFLEHMLFMGSEKYPDEGGFSEFLSKHGGSHNAST 102 (937)
T ss_pred eEEECCCCceEEEecCCC--CCccceeEEeecCCCCChhhcccHHHHHHHHHHhcCccCCCccchHHHHHHcCCcccccc
Confidence 367899999999999885 677788888877776667778999999999986433211 11222 2355556666
Q ss_pred ecceeEEEEcccCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHhcCcCChhhHHHHHHHHhhcc-CCCC--HHHH
Q 003164 469 FSDKLELKVYGFNDKLPVLLSKILAIAKSFLPSDDRFKVIKEDVVRTLKNTNMKPLSHSSYLRLQVLCQ-SFYD--VDEK 545 (843)
Q Consensus 469 ~~~~~~~~~~g~s~~~~~~l~ll~~~l~~p~~~~~~~~~~k~~~~~~l~~~~~~p~~~~~~~~~~~l~~-~~~~--~~~~ 545 (843)
..+.+.+.+....+.++.+++.+++.+.+|.|+++..++++..+-.++.....+-.+...+....+..+ ++++ ..|.
T Consensus 103 ~~~~T~fyFeV~~~al~~ALDrFa~ff~~PLf~~e~~dRE~~AV~sE~~~~~~~D~~R~~~~~~~~~np~HP~srFs~GN 182 (937)
T COG1025 103 AGERTAFYFEVENDALEGALDRFADFFIEPLFNKEALDRERNAVNSEFTMNLTSDGWRMYQVQALTANPGHPLSKFSTGN 182 (937)
T ss_pred CCCceeEEEEecHHHHHHHHHHHHHHHhccccChHHHHHHHHHHHHHHhcCcCchHHHHHHHHHhhcCCCCCccccCCCC
Confidence 666777777777899999999999999999999999999999999999887664444444443334443 3332 2344
Q ss_pred HHHhcc----CCHHHHHHHHHHHHhhhceeeeeecCCCHHHHHHHHHHHHhhcCCCCCCccccccceeeecCCCCeEEEE
Q 003164 546 LSILHG----LSLADLMAFIPELRSQLYIEGLCHGNLSQEEAIHISNIFKSIFSVQPLPIEMRHQECVICLPSGANLVRN 621 (843)
Q Consensus 546 ~~~l~~----it~edl~~~~~~~~~~~~~~~~i~Gdi~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 621 (843)
.++|.. -..+++.+||+++|.+.+|+++|.|+=+.+++.+++.++++.+|.+.......+.+.......+.. . .
T Consensus 183 ~~TL~~~p~~~v~~el~ef~~~~YSa~~M~lviyg~q~ldeL~~~a~~~F~~Ipn~~~~~p~~p~p~~~d~~t~~i-i-~ 260 (937)
T COG1025 183 LETLSDKPGLVVQQELKEFHEKHYSANNMKLVIYGNQPLDELAKLAADLFGDIPNRARKIPPIPVPVVTDEQTGKI-I-H 260 (937)
T ss_pred hhhhccCCCchHHHHHHHHHHHhcChhheEEEEecCCCHHHHHHHHHHHhCcCCCCCCCCCCCCCCCCChHHhCce-E-E
Confidence 556655 457999999999999999999999999999999999999999997533221122111111111222 1 1
Q ss_pred eccCCCCCCCeEEEEEEeeccccCcc-cHHHHHHHHHHHHHhChhHHHHHhhhccccEEEEeeeeeeCCeeE-EEEEEeC
Q 003164 622 VSVKNKCETNSVIELYFQIEQEKGME-LTRLKALIDLFDEILEEPFFNQLRTKEQLGYVVECSPRVTYRVFG-FCFCIQS 699 (843)
Q Consensus 622 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ll~~~l~s~l~~~LRek~gl~Y~v~~~~~~~~~~~~-~~~~i~s 699 (843)
+ .|..+...+.++|+++.....+ +-...+...+++.==.+-|-..|.+ +||+=++.++.....+..+ +.+.+.-
T Consensus 261 i---~p~~~~~~L~i~f~i~~~~~~~~~~~~~~~s~Lig~es~gsL~~~Lk~-~Glit~l~a~~~~~~~n~~~f~is~~L 336 (937)
T COG1025 261 I---VPAKPRPRLRIYFPIDDNSAKFRSKPDEYLSHLIGNESPGSLLAWLKK-QGLITELSAGLDPISGNYGVFAISYEL 336 (937)
T ss_pred e---ccCCCCceEEEEEEcCCcccccccCCHHHHHHHhccCCCchHHHHHHh-ccchhhhccccccccCCcceEEEEeeh
Confidence 2 2334566777788873111111 3344555666655444566677775 5999888887776553333 4433221
Q ss_pred CCCChhHHHHHHHHHHHHHHHHH-hcCCHHHHHHHHHHHHHHHcCCCC-ChHHHHHHHHHHHhcCcccccccHHHHHHHh
Q 003164 700 SKYNPIYLQERIDNFISGLDELL-EGLDDESFENYRSGLMAKLLEKDP-SLTYESNRFWNQITDKRYMFDQSQKEAEDLK 777 (843)
Q Consensus 700 ~~~~~~~~~~~i~~~~~~~~~~l-~~ite~el~~~k~~l~~~~~~~~~-s~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~ 777 (843)
...--.+..+.|....+.+.-+. +++....|++...-.-..+..... .+.+... |.......++.+..-.+.-.+.
T Consensus 337 T~~Gl~~~~~VI~~~F~yl~~l~~~~~~~~~f~Elq~v~~l~f~y~~~t~~~~~~~--~l~~~m~~~p~~~~~~~~~~~~ 414 (937)
T COG1025 337 TDKGLAHYDRVIALTFQYLNLLREKGIPKYTFDELQNVLDLDFRYPSKTRPMDYVS--WLADNMEREPVEHTLYASLVLP 414 (937)
T ss_pred hhcchhhHHHHHHHHHHHHHHHHhccchhhHHHHHHHHHHhhhcccccCChHHHHH--HHHHhcccCChhhhhchhhccc
Confidence 11112333444544444333222 567767777765533333333222 2222222 3322222223333222333456
Q ss_pred cCCHHHHHHHHHHhhccCCCCcceEEEEEecCCCC
Q 003164 778 SIKKNDVISWYKTYLQQWSPKCRRLAVRVWGCNTN 812 (843)
Q Consensus 778 ~it~edi~~~a~~~l~~~~~~~~~~~~~v~g~~~~ 812 (843)
.=.+++++.+..-.. |+ .+.+...++...
T Consensus 415 ~yd~~~~~~~l~~~~-pe-----n~R~~lis~~~~ 443 (937)
T COG1025 415 RYDPKAIQERLALMT-PE-----NARLWLISKLEE 443 (937)
T ss_pred ccCHHHHHHHHHhhC-cc-----ceEEEEecCCCC
Confidence 667899999987655 74 466666655433
No 22
>KOG0959 consensus N-arginine dibasic convertase NRD1 and related Zn2+-dependent endopeptidases, insulinase superfamily [Posttranslational modification, protein turnover, chaperones]
Probab=99.33 E-value=1.2e-09 Score=125.12 Aligned_cols=397 Identities=12% Similarity=-0.004 Sum_probs=239.1
Q ss_pred EEecCCCeEEEEecCCccCCcceeEEEEEecCCCCCCHHHHHHHHHHHHHHHHHHHHH----hHHhhh--cccEeEEEEe
Q 003164 396 CIIDEPLIRFWYKLDNTFKLPRANTYFRINLKGGYDNVKNCILTELFIHLLKDELNEI----IYQASV--AKLETSVSIF 469 (843)
Q Consensus 396 ~~~~~ng~~v~~~~~~~~~~p~~~i~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~----~~~~~~--~g~~~~~~~~ 469 (843)
.+.+.||+++++.+|.+.+ +....+.+..|...++.+..|+++++.+|+-.+..++ .+...+ .|.+-.....
T Consensus 30 ~~~L~Ngl~alLisDp~tD--~ssaal~V~vGS~~DP~dl~GLAHF~EHMlFmGS~KYP~En~y~~~lsk~gGssNA~T~ 107 (974)
T KOG0959|consen 30 GIELTNGLRALLISDPKTD--KSSAALDVKVGSFSDPEDLQGLAHFCEHMLFMGSEKYPDENEYSKFLSKNGGSSNAYTD 107 (974)
T ss_pred EEEecCCceEEEecCCCCC--ccceeeeeeccccCCccccccHHHHHHHHHhhccccCCCcchhHHHHHhcCCccccccc
Confidence 5789999999999987533 4566666666666677788999999999987543321 122222 2454555555
Q ss_pred cceeEEEEcccCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHhcCcCChhhHHHHHHHHhhcc-CCCC--HHHHH
Q 003164 470 SDKLELKVYGFNDKLPVLLSKILAIAKSFLPSDDRFKVIKEDVVRTLKNTNMKPLSHSSYLRLQVLCQ-SFYD--VDEKL 546 (843)
Q Consensus 470 ~~~~~~~~~g~s~~~~~~l~ll~~~l~~p~~~~~~~~~~k~~~~~~l~~~~~~p~~~~~~~~~~~l~~-~~~~--~~~~~ 546 (843)
.+.....+....+.++.+|+.++..+.+|.|.++..++++..+-.+.++...+-.+........+..+ ++++ ..|..
T Consensus 108 ~e~T~y~F~V~~~~l~~ALDrFaqFf~~Plf~~~a~eREv~AVdSE~~~nl~~D~wr~~ql~~~l~~~~hp~~kF~tGN~ 187 (974)
T KOG0959|consen 108 SEHTNYYFDVQHDHLEGALDRFAQFFSDPLFNKSATEREVGAVDSEHEKNLNSDGWRFDQLLRSLSNPGHPYSKFSTGNK 187 (974)
T ss_pred cccceEEEecchHHHHHHHHHHHHHhhCcccChHHHHHHHHHHHHHHHhccCcchhHHHHHHHHhcCCCCcchhccccch
Confidence 56666666667788999999999999999999999999999999999988775555555555444443 3443 35567
Q ss_pred HHhccCC-----HHHHHHHHHHHHhhhceeeeeecCCCHHHHHHHHHHHHhhcCCCCCCccccccceeeecCC-CCeEEE
Q 003164 547 SILHGLS-----LADLMAFIPELRSQLYIEGLCHGNLSQEEAIHISNIFKSIFSVQPLPIEMRHQECVICLPS-GANLVR 620 (843)
Q Consensus 547 ~~l~~it-----~edl~~~~~~~~~~~~~~~~i~Gdi~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~ 620 (843)
++|...- .+.|++||+++|.+++|+++|+|+-+.+.+..++.+.++.++....+...++.. + ..+. -...+.
T Consensus 188 ~tL~~~p~~~~~r~~L~kF~k~~Yssn~M~l~i~G~eslD~Le~lv~~~F~~i~N~~~~~p~f~~~-p-~~~e~~~~~~~ 265 (974)
T KOG0959|consen 188 KTLLEGPREIDLRDELLKFYKNWYSSNIMTLVIVGKESLDVLESLVTRLFDEISNKKKPRPVFPEP-P-FLPEELKKLVR 265 (974)
T ss_pred hhhhhccccchHHHHHHHHHHhhcccccceEEEEcCCChhHHHHHHHHHcccccccCCCCCcccCC-C-CChHHhCcEEE
Confidence 7777776 899999999999999999999999999999999999998888654333223322 1 1111 111121
Q ss_pred EeccCCCCCCCeEEEEEEeeccccCc-ccHHHHHHHHHHHHHhChhHHHHHhhhccccEEEEeeeeeeC-CeeEEEEEEe
Q 003164 621 NVSVKNKCETNSVIELYFQIEQEKGM-ELTRLKALIDLFDEILEEPFFNQLRTKEQLGYVVECSPRVTY-RVFGFCFCIQ 698 (843)
Q Consensus 621 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ll~~~l~s~l~~~LRek~gl~Y~v~~~~~~~~-~~~~~~~~i~ 698 (843)
..+ ...-..+.+.|+.++..+. .+.+..+..++++.-=.+-|...||. +|++=+..++..... +.+.+.+.+.
T Consensus 266 v~p----ik~~~~l~is~~~p~~~~~y~~kP~~y~~hLigheg~GSL~~~Lk~-~gw~~sl~a~~~~~as~~~~f~v~id 340 (974)
T KOG0959|consen 266 VVP----IKDGRSLMISWPVPPLNHHYKSKPLRYLSHLIGHEGPGSLLSYLKR-LGWATSLEAGIPEFASGYSFFNVSID 340 (974)
T ss_pred EEe----ccccceEEEEEecCCcccccccCcHHHHHHHhccCCcchHHHHHHH-hhchheeecCCCccccccceEEEEEE
Confidence 222 2234455566777211111 24455666677666556778889995 467766666655222 2222333332
Q ss_pred CCCCChhHHHHHHHHHHHHHHHHH-hcCCHHHHHHHHHHHHHHHcCCC-CChHHHHHHHHHHHhcCcccccccHHHHHHH
Q 003164 699 SSKYNPIYLQERIDNFISGLDELL-EGLDDESFENYRSGLMAKLLEKD-PSLTYESNRFWNQITDKRYMFDQSQKEAEDL 776 (843)
Q Consensus 699 s~~~~~~~~~~~i~~~~~~~~~~l-~~ite~el~~~k~~l~~~~~~~~-~s~~~~~~~~~~~i~~~~~~~~~~~~~~~~i 776 (843)
-...--+.+++.|..+.+.+..+. .+.-..-+++...-=-..+.... +.+.+.+..+-..+. .++....=.....+
T Consensus 341 Ltd~G~e~~~~ii~~~f~yi~~l~~~~~~~~i~~E~~~~~~~~Frf~~k~~p~~~~~~~~~nlq--~~P~~~il~~~~ll 418 (974)
T KOG0959|consen 341 LTDEGLEHVDEIIGLVFNYIKLLQSAGPEKWIFKELQLISEVKFRFQDKEPPMEYASEIASNLQ--YYPVEDVLTGSYLL 418 (974)
T ss_pred eccccchhHHHHHHHHHHHHHHHHhcCchhHHHHHHHHhhhhheeecccCCcHHHHHHHHhhcc--cCChHHhhcchhhh
Confidence 211123455555655555444322 34443344444321111222211 233333333322221 23332222223455
Q ss_pred hcCCHHHHHHHHHHhhccCCCCcceEEEEEecC
Q 003164 777 KSIKKNDVISWYKTYLQQWSPKCRRLAVRVWGC 809 (843)
Q Consensus 777 ~~it~edi~~~a~~~l~~~~~~~~~~~~~v~g~ 809 (843)
....++-++.+.. .+.|. .+.+++++.
T Consensus 419 ~~~~p~~i~~~~~-~L~p~-----n~~v~~~s~ 445 (974)
T KOG0959|consen 419 TEFDPDLIQEVLS-SLVPS-----NMRVILVSR 445 (974)
T ss_pred hhcChHHHHHHHH-hcCcc-----cceeeeeee
Confidence 6666777777664 46663 455555543
No 23
>KOG2583 consensus Ubiquinol cytochrome c reductase, subunit QCR2 [Energy production and conversion]
Probab=99.32 E-value=6.5e-09 Score=104.64 Aligned_cols=374 Identities=10% Similarity=0.077 Sum_probs=235.5
Q ss_pred ecCCCeEEEEecCCccCCcceeEEEEEecCCCCCCHHHHHHHHHHHHHHHHHHH-----HHhHHhhhcccEeEEEEecce
Q 003164 398 IDEPLIRFWYKLDNTFKLPRANTYFRINLKGGYDNVKNCILTELFIHLLKDELN-----EIIYQASVAKLETSVSIFSDK 472 (843)
Q Consensus 398 ~~~ng~~v~~~~~~~~~~p~~~i~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----~~~~~~~~~g~~~~~~~~~~~ 472 (843)
.+.||++|--...+ +|...+.+.|+.+..+++..+.++.+++-...+.... ......++.|..++...+.+.
T Consensus 27 kl~ngL~Vas~e~~---~~is~l~l~~~AGSRYe~~~~~G~sHllr~f~g~~Tq~~sal~ivr~se~~GG~Lss~~tRe~ 103 (429)
T KOG2583|consen 27 KLVNGLTVASREAP---TAISSLSLAFRAGSRYEPADQQGLSHLLRNFVGRDTQERSALKIVRESEQLGGTLSSTATREL 103 (429)
T ss_pred ccccceEEEeccCC---CcceEEEEEEecCccCCccccccHHHHHHHhcccCccccchhhhhhhhHhhCceeeeeeecce
Confidence 56789999888766 4888999999988888887777887777666543222 123344567888999999999
Q ss_pred eEEEEcccCCCHHHHHHHHHHHHhcCCCCHHHHHHHH-HHHHHHHhcCcCChhhHHHHHHHHhhccC-----CCCHHHHH
Q 003164 473 LELKVYGFNDKLPVLLSKILAIAKSFLPSDDRFKVIK-EDVVRTLKNTNMKPLSHSSYLRLQVLCQS-----FYDVDEKL 546 (843)
Q Consensus 473 ~~~~~~g~s~~~~~~l~ll~~~l~~p~~~~~~~~~~k-~~~~~~l~~~~~~p~~~~~~~~~~~l~~~-----~~~~~~~~ 546 (843)
+.+++..+.++++..+.++.+.+..|.|.+=+++... ..+...+ ...+|...+++.+.+..+.+ .|.+.
T Consensus 104 ~~~tvt~lrd~~~~~l~~L~~V~~~paFkPwEl~D~~~~ti~~~l--~~~t~~~~a~e~lH~aAfRngLgnslY~p~--- 178 (429)
T KOG2583|consen 104 IGLTVTFLRDDLEYYLSLLGDVLDAPAFKPWELEDVVLATIDADL--AYQTPYTIAIEQLHAAAFRNGLGNSLYSPG--- 178 (429)
T ss_pred EEEEEEEecccHHHHHHHHHHhhcccCcCchhhhhhhhhhhHHHh--hhcChHHHHHHHHHHHHHhcccCCcccCCc---
Confidence 9999999999999999999999999999986665554 3333333 23478888888777655422 23322
Q ss_pred HHhccCCHHHHHHHHHHHHhhhceeeeeecCCCHHHHHHHHHHHHhhcCCCCCCccccccceeeecCCCCeEEEEeccCC
Q 003164 547 SILHGLSLADLMAFIPELRSQLYIEGLCHGNLSQEEAIHISNIFKSIFSVQPLPIEMRHQECVICLPSGANLVRNVSVKN 626 (843)
Q Consensus 547 ~~l~~it~edl~~~~~~~~~~~~~~~~i~Gdi~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 626 (843)
-.+.+++.++|..|-.++|...|+.++-+| +|.+.++.+.+++. .++.+ .+. .+. +.....+.. . . ..
T Consensus 179 ~~vg~vss~eL~~Fa~k~fv~gn~~lvg~n-vd~~~L~~~~~~~~-~~~~~-~~~--k~a--~a~~~gGe~-R--k--~~ 246 (429)
T KOG2583|consen 179 YQVGSVSSSELKDFAAKHFVKGNAVLVGVN-VDHDDLKQFADEYA-PIRDG-LPL--KPA--PAKYSGGEA-R--K--DA 246 (429)
T ss_pred ccccCccHHHHHHHHHHHhhccceEEEecC-CChHHHHHHHHHhc-cccCC-CCC--CCC--CccccCCcc-c--c--cc
Confidence 247789999999999999999998877776 78899999888872 12111 110 000 011111111 1 0 11
Q ss_pred CCCCCeEEEEEEeeccccCc--ccHHHHHHHHHHHHHhC--------hhHHHHHhhhcc-ccEEEEeeeeeeCCeeEEEE
Q 003164 627 KCETNSVIELYFQIEQEKGM--ELTRLKALIDLFDEILE--------EPFFNQLRTKEQ-LGYVVECSPRVTYRVFGFCF 695 (843)
Q Consensus 627 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ll~~~l~--------s~l~~~LRek~g-l~Y~v~~~~~~~~~~~~~~~ 695 (843)
.+ ....+. ...- |. .+.+.-.+..++.+.|. ..++-++--.-+ -+-++.+....+.+.+-+.+
T Consensus 247 ~g-~~~~v~-vage----gAAa~~~k~~~a~av~~~~Lg~~~~~k~~t~~~~~aa~~a~~~~~s~sA~~a~ysDsGL~gv 320 (429)
T KOG2583|consen 247 RG-NRVHVA-VAGE----GAAAGNLKVLAAQAVLLAALGNSAPVKRGTGLLSEAAGAAGEQGASASAFNAPYSDSGLFGV 320 (429)
T ss_pred CC-ceeEEE-EecC----cccccchHHHHHHHHHHHHHhcccccccccchHHHHHhhccccCceeeeecccccCCceEEE
Confidence 12 222222 2222 32 34555555555555553 223444443221 22334444444444444555
Q ss_pred EEeCCCCChhHHHHHHHHHHHHHHHHH-hcCCHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHhcCcccccccHHHHH
Q 003164 696 CIQSSKYNPIYLQERIDNFISGLDELL-EGLDDESFENYRSGLMAKLLEKDPSLTYESNRFWNQITDKRYMFDQSQKEAE 774 (843)
Q Consensus 696 ~i~s~~~~~~~~~~~i~~~~~~~~~~l-~~ite~el~~~k~~l~~~~~~~~~s~~~~~~~~~~~i~~~~~~~~~~~~~~~ 774 (843)
++... .+ ...+++......+...+ .+++...-+.+.+.+..........+....... . .+ ....+++++
T Consensus 321 ~~~~~--~~-~a~~~v~s~v~~lks~~~~~id~~~~~a~~~~l~~~~~ss~~a~~~~~~~~-----a-~~-~~~~d~~i~ 390 (429)
T KOG2583|consen 321 YVSAQ--GS-QAGKVVSSEVKKLKSALVSDIDNAKVKAAIKALKASYLSSVEALELATGSQ-----A-NL-VSEPDAFIQ 390 (429)
T ss_pred EEEec--Cc-cHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHhhcchHHHHHhhHHH-----h-cC-CCChHHHHH
Confidence 55442 22 44556666666666554 577777777777777766655443322222211 1 11 114678899
Q ss_pred HHhcCCHHHHHHHHHHhhccCCCCcceEEEEEecCCCCc
Q 003164 775 DLKSIKKNDVISWYKTYLQQWSPKCRRLAVRVWGCNTNI 813 (843)
Q Consensus 775 ~i~~it~edi~~~a~~~l~~~~~~~~~~~~~v~g~~~~~ 813 (843)
.|++||..||++++++++.. ++++.-+|+-+.+
T Consensus 391 ~id~Vt~sdV~~a~kk~~s~------kls~aA~Gnl~~v 423 (429)
T KOG2583|consen 391 QIDKVTASDVQKAAKKFLSG------KLSLAAYGNLSNV 423 (429)
T ss_pred HhccccHHHHHHHHHHhccC------cceeeeeccccCC
Confidence 99999999999999999854 7999999986554
No 24
>KOG2019 consensus Metalloendoprotease HMP1 (insulinase superfamily) [General function prediction only; Posttranslational modification, protein turnover, chaperones]
Probab=99.17 E-value=1.3e-08 Score=108.61 Aligned_cols=386 Identities=14% Similarity=0.067 Sum_probs=226.1
Q ss_pred cCCCeEEEEecCCccCCcceeEEEEEecCCCCCCH-------------HHHHHHHHHHHHHHHHHHHHhHHhhhcccEeE
Q 003164 399 DEPLIRFWYKLDNTFKLPRANTYFRINLKGGYDNV-------------KNCILTELFIHLLKDELNEIIYQASVAKLETS 465 (843)
Q Consensus 399 ~~ng~~v~~~~~~~~~~p~~~i~~~~~~~~~~~~~-------------~~~~~~~l~~~~l~~~~~~~~~~~~~~g~~~~ 465 (843)
..-|.++.....+. ++..+++.|+.+...+.. .+...-.=|-.|++.++..... + ..+
T Consensus 59 ~~Tgae~lhl~reD---~N~vFsI~FrTpp~dstGiPHILEHtvLCGS~KYPvrdPFfkmLnrSLatFmN-A-fT~---- 129 (998)
T KOG2019|consen 59 KKTGAEVLHLDRED---ENNVFSIVFRTPPKDSTGIPHILEHTVLCGSRKYPVRDPFFKMLNRSLATFMN-A-FTA---- 129 (998)
T ss_pred cCCCceeEeeccCC---CCceeEEEeecCCCccCCCchhhhhheeeccCcCcccChHHHHHHHHHHHHHh-h-ccC----
Confidence 34577777665443 356788888887654321 0111122233444444432211 1 111
Q ss_pred EEEecceeEEEEcc-cCCCHHHHHHHHHHHHhcCCCCHHHHHHH------------------HHHHHHHHhcCcCChhhH
Q 003164 466 VSIFSDKLELKVYG-FNDKLPVLLSKILAIAKSFLPSDDRFKVI------------------KEDVVRTLKNTNMKPLSH 526 (843)
Q Consensus 466 ~~~~~~~~~~~~~g-~s~~~~~~l~ll~~~l~~p~~~~~~~~~~------------------k~~~~~~l~~~~~~p~~~ 526 (843)
.+....-+.+ -+.++..+.+...|....|...+..|.++ |-.+-++.+-...+|...
T Consensus 130 ----pD~T~yPfattN~kDf~NL~dVYLDAtffPklr~~dF~QEGWr~Eh~dpsd~~SpivfkGVVfNEMKG~~S~~~~i 205 (998)
T KOG2019|consen 130 ----PDYTFYPFATTNTKDFYNLRDVYLDATFFPKLRKLDFQQEGWRLEHNDPSDPISPIVFKGVVFNEMKGQYSDPDYI 205 (998)
T ss_pred ----CCcceeecccCChHHHHHHHHHhhhcccchHHHhhhhhhhcceeecCCCCCCcccceeeeeeeecccccccChhHH
Confidence 1222222222 34678888888888877776555555432 233445566555677777
Q ss_pred HHHHHHHhhcc-CCCCH--HHHHHHhccCCHHHHHHHHHHHHhhhceeeeeecCCCHHHHHHHHHHHHhhcCCCCCCccc
Q 003164 527 SSYLRLQVLCQ-SFYDV--DEKLSILHGLSLADLMAFIPELRSQLYIEGLCHGNLSQEEAIHISNIFKSIFSVQPLPIEM 603 (843)
Q Consensus 527 ~~~~~~~~l~~-~~~~~--~~~~~~l~~it~edl~~~~~~~~~~~~~~~~i~Gdi~~~~~~~~~~~~~~~l~~~~~~~~~ 603 (843)
+...+.+.+++ +.|+. -|..-.|-.++.|++++|++++|.|+|+.++..||++.++...+++.-+...........
T Consensus 206 f~~~~Qq~L~p~~tYgv~SGGDPl~IpdLt~eelk~FHr~~YHPSNAri~tYGn~Pl~~~l~~l~e~~~~~sk~~~s~k- 284 (998)
T KOG2019|consen 206 FGMLFQQALFPENTYGVNSGGDPLDIPDLTYEELKEFHRQHYHPSNARIFTYGNFPLEDLLKQLEEDFSPFSKRELSSK- 284 (998)
T ss_pred HHHHHHHhhCccccccccCCCCcccCccccHHHHHHHHHhccCCCcceeEeecCchHHHHHHHHHHhhcccccccccCc-
Confidence 77777777765 34432 234567889999999999999999999999999999999988877753333322211100
Q ss_pred cccceeeecCCCCeEEEEec---cCCCCCCCeEEEEEEeeccccCc-ccHHHHHHHHHHHHHh----ChhHHHHHhhhcc
Q 003164 604 RHQECVICLPSGANLVRNVS---VKNKCETNSVIELYFQIEQEKGM-ELTRLKALIDLFDEIL----EEPFFNQLRTKEQ 675 (843)
Q Consensus 604 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ll~~~l----~s~l~~~LRek~g 675 (843)
.+.+... .+...++..-+ ...| ..+..+.+.|.. +. .+..+..++.+|+.+| +|.+++.|-|- |
T Consensus 285 v~~qk~f--~kp~rvve~~p~d~~~~p-~Kq~~~s~s~L~----~~p~d~~etfaL~~L~~Ll~~gpsSp~yk~LiES-G 356 (998)
T KOG2019|consen 285 VTFQKLF--DKPRRVVEKGPADPGDLP-KKQTKCSNSFLS----NDPLDTYETFALKVLSHLLLDGPSSPFYKALIES-G 356 (998)
T ss_pred ccccccc--ccCceeeeecCCCCCCCc-cceeEEEEEeec----CCchhHHHHHHHHHHHHHhcCCCccHHHHHHHHc-C
Confidence 0001111 11111111111 1112 245666667666 43 5677788899999887 68999999985 7
Q ss_pred cc--EEEEeeeeeeCCeeEEEEEEeCCC-CChhHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHcCCCCChHHH-
Q 003164 676 LG--YVVECSPRVTYRVFGFCFCIQSSK-YNPIYLQERIDNFISGLDELLEGLDDESFENYRSGLMAKLLEKDPSLTYE- 751 (843)
Q Consensus 676 l~--Y~v~~~~~~~~~~~~~~~~i~s~~-~~~~~~~~~i~~~~~~~~~~l~~ite~el~~~k~~l~~~~~~~~~s~~~~- 751 (843)
|| .+|.+++......+.|.+.++.-+ .+.+.+++.|...++.+.+ +++..+-++.....+--++..+....+-.
T Consensus 357 LGtEfsvnsG~~~~t~~~~fsVGLqGvseediekve~lV~~t~~~lae--~gfd~drieAil~qiEislk~qst~fGL~L 434 (998)
T KOG2019|consen 357 LGTEFSVNSGYEDTTLQPQFSVGLQGVSEEDIEKVEELVMNTFNKLAE--TGFDNDRIEAILHQIEISLKHQSTGFGLSL 434 (998)
T ss_pred CCcccccCCCCCcccccceeeeeeccccHHHHHHHHHHHHHHHHHHHH--hccchHHHHHHHHHhhhhhhccccchhHHH
Confidence 87 788888876655566667777632 2455555555555554443 68888888888777766665543332111
Q ss_pred HHHHHHHHhcCcccccc------cHHHHHHHhcCCHHHHHHHHHHhhccCCCCcceEEEEEecCCC
Q 003164 752 SNRFWNQITDKRYMFDQ------SQKEAEDLKSIKKNDVISWYKTYLQQWSPKCRRLAVRVWGCNT 811 (843)
Q Consensus 752 ~~~~~~~i~~~~~~~~~------~~~~~~~i~~it~edi~~~a~~~l~~~~~~~~~~~~~v~g~~~ 811 (843)
+.........+.-+|+. .+...+++..-++.=++.+.++|+... ..++++.+.|+++
T Consensus 435 ~~~i~~~W~~d~DPfE~Lk~~~~L~~lk~~l~ek~~~lfq~lIkkYilnn---~h~~t~smqpd~e 497 (998)
T KOG2019|consen 435 MQSIISKWINDMDPFEPLKFEEQLKKLKQRLAEKSKKLFQPLIKKYILNN---PHCFTFSMQPDPE 497 (998)
T ss_pred HHHHhhhhccCCCccchhhhhhHHHHHHHHHhhhchhHHHHHHHHHHhcC---CceEEEEecCCch
Confidence 11111112222224443 234455565557778999999999763 4578888888764
No 25
>PF00675 Peptidase_M16: Insulinase (Peptidase family M16) This is family M16 in the peptidase classification. ; InterPro: IPR011765 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. The majority of the sequences in this entry are metallopeptidases and non-peptidase homologs belong to MEROPS peptidase family M16 (clan ME), subfamilies M16A, M16B and M16C; they include: Insulinase, insulin-degrading enzyme (3.4.24.56 from EC) Mitochondrial processing peptidase alpha subunit, (Alpha-MPP, 3.4.24.64 from EC) Pitrlysin, Protease III precursor (3.4.24.55 from EC) Nardilysin, (3.4.24.61 from EC) Ubiquinol-cytochrome C reductase complex core protein I,mitochondrial precursor (1.10.2.2 from EC) Coenzyme PQQ synthesis protein F (3.4.99 from EC) These proteins do not share many regions of sequence similarity; the most noticeable is in the N-terminal section. This region includes a conserved histidine followed, two residues later by a glutamate and another histidine. In pitrilysin, it has been shown [] that this H-x-x-E-H motif is involved in enzymatic activity; the two histidines bind zinc and the glutamate is necessary for catalytic activity. The proteins classified as non-peptidase homologues either have been found experimentally to be without peptidase activity, or lack amino acid residues that are believed to be essential for the catalytic activity. ; GO: 0004222 metalloendopeptidase activity, 0006508 proteolysis; PDB: 3P7L_A 3P7O_A 3TUV_A 3GO9_A 1BE3_B 1PP9_B 2A06_B 1SQB_B 1SQP_B 1L0N_B ....
Probab=98.63 E-value=2e-07 Score=86.78 Aligned_cols=135 Identities=13% Similarity=0.091 Sum_probs=109.9
Q ss_pred EEEEecCCccCCcceeEEEEEecCCCCCCHHHHHHHHHHHHHHHHHH-----HHHhHHhhhcccEeEEEEecceeEEEEc
Q 003164 404 RFWYKLDNTFKLPRANTYFRINLKGGYDNVKNCILTELFIHLLKDEL-----NEIIYQASVAKLETSVSIFSDKLELKVY 478 (843)
Q Consensus 404 ~v~~~~~~~~~~p~~~i~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 478 (843)
+|++..++. .|.+.+.+.+..|...++....|++.++..++..+. .+........|.+++...+.+.+.+.+.
T Consensus 1 ~V~~~~~~~--~~~~~~~l~~~~Gs~~e~~~~~G~a~ll~~l~~~gs~~~~~~~l~~~l~~~G~~~~~~t~~d~t~~~~~ 78 (149)
T PF00675_consen 1 KVVLVEDPG--SPVVSVSLVFKAGSRYEPPGKPGLAHLLEHLLFRGSKKYSSDELQEELESLGASFNASTSRDSTSYSAS 78 (149)
T ss_dssp EEEEEESTT--SSEEEEEEEES-SGGGSCTTTTTHHHHHHHHTTSBBSSSBHHHHHHHHHHTTCEEEEEEESSEEEEEEE
T ss_pred CEEEEEcCC--CCEEEEEEEEeeccCCCCCCCCchhhhhhhhcccccchhhhhhhHHHhhhhccccceEecccceEEEEE
Confidence 577777653 677888888887777778888899999999875431 1122223456888999999999999999
Q ss_pred ccCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHhcCcCChhhHHHHHHHHhhcc-CCC
Q 003164 479 GFNDKLPVLLSKILAIAKSFLPSDDRFKVIKEDVVRTLKNTNMKPLSHSSYLRLQVLCQ-SFY 540 (843)
Q Consensus 479 g~s~~~~~~l~ll~~~l~~p~~~~~~~~~~k~~~~~~l~~~~~~p~~~~~~~~~~~l~~-~~~ 540 (843)
+++++++.+|+++.+.+.+|.|+++.|+++|..++.+++....+|...+...+...++. ++|
T Consensus 79 ~~~~~~~~~l~~l~~~~~~P~f~~~~~~~~r~~~~~ei~~~~~~~~~~~~~~l~~~~f~~~p~ 141 (149)
T PF00675_consen 79 VLSEDLEKALELLADMLFNPSFDEEEFEREREQILQEIEEIKENPQELAFEKLHSAAFRGHPY 141 (149)
T ss_dssp EEGGGHHHHHHHHHHHHHSBGGCHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHTTSGG
T ss_pred EecccchhHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHhccCCC
Confidence 99999999999999999999999999999999999999998888988888888887664 444
No 26
>KOG0961 consensus Predicted Zn2+-dependent endopeptidase, insulinase superfamily [Posttranslational modification, protein turnover, chaperones]
Probab=98.63 E-value=2.3e-06 Score=91.86 Aligned_cols=310 Identities=13% Similarity=0.119 Sum_probs=181.0
Q ss_pred ceeEEEEccc-CCCHHHHHHHHHHHHhcCCCCHHHHHHHH----------HHHHHHHhcCcCChhhHHHHHHHHhhccC-
Q 003164 471 DKLELKVYGF-NDKLPVLLSKILAIAKSFLPSDDRFKVIK----------EDVVRTLKNTNMKPLSHSSYLRLQVLCQS- 538 (843)
Q Consensus 471 ~~~~~~~~g~-s~~~~~~l~ll~~~l~~p~~~~~~~~~~k----------~~~~~~l~~~~~~p~~~~~~~~~~~l~~~- 538 (843)
+.....+++- ++.+-.+|-...+-+.+|.++++.|-.+. -.+-.+.++...+...+..+..+..+|+.
T Consensus 97 D~T~YtLStag~dGFlklLPvy~dHiL~P~Ltdeaf~TEVyHI~geg~d~GVVySEMq~~es~~~~im~~~~~~~~yP~~ 176 (1022)
T KOG0961|consen 97 DHTAYTLSTAGSDGFLKLLPVYIDHILTPMLTDEAFATEVYHITGEGNDAGVVYSEMQDHESEMESIMDRKTKEVIYPPF 176 (1022)
T ss_pred CcceEEeecccccchHHHhHHHHHhhcCcccchhhhhhheeeecCCCCccceeehhhhhhhcccchhhhhhhheeecCCC
Confidence 4444444433 67899999999999999999999997653 22333333333333344455555566653
Q ss_pred -CC--CHHHHHHHhccCCHHHHHHHHHHHHhhhceeeeeecCCCHHHHHHHHHHHHhhcCCCC--CCccccccc-----e
Q 003164 539 -FY--DVDEKLSILHGLSLADLMAFIPELRSQLYIEGLCHGNLSQEEAIHISNIFKSIFSVQP--LPIEMRHQE-----C 608 (843)
Q Consensus 539 -~~--~~~~~~~~l~~it~edl~~~~~~~~~~~~~~~~i~Gdi~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~-----~ 608 (843)
.| ..-|..+.|+.+|.|.+++|++++|.++|+-+.|+|+++.+++....+.+.+.++..+ .|. +++.+ .
T Consensus 177 sgY~~eTGG~~knLR~lt~ekIR~yHK~~Y~~sN~cviVcG~v~~d~lL~~m~~~~neile~~s~vP~-~~~rPf~~tn~ 255 (1022)
T KOG0961|consen 177 SGYAVETGGRLKNLRELTLEKIRDYHKKFYHLSNMCVIVCGMVDHDQLLEIMNNVENEILEHMSTVPD-HFPRPFSFTNA 255 (1022)
T ss_pred CCceeccCCChhhHHHhhHHHHHHHHHHhccccceEEEEecCcCHHHHHHHHHHHHhhhhhccccCCC-CCCCCcccccC
Confidence 23 3456788899999999999999999999999999999999999998888877665432 111 12211 0
Q ss_pred eeecCCCCeEEEEeccCCCCCCCeEEEEEEeeccccCc-ccHHHHHHHHHHHHHhCh----hHHHHHhhh-ccccEEEEe
Q 003164 609 VICLPSGANLVRNVSVKNKCETNSVIELYFQIEQEKGM-ELTRLKALIDLFDEILEE----PFFNQLRTK-EQLGYVVEC 682 (843)
Q Consensus 609 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ll~~~l~s----~l~~~LRek-~gl~Y~v~~ 682 (843)
...++......+..+ ..++.+..+.+.|.. ++ .+.+...++++|-+.|+. .+-+++.|- --++-+|+.
T Consensus 256 ~~~i~e~t~~tVefp--~~Des~G~v~~aW~g----~s~sD~~t~~a~~vL~dyls~savapf~~~fVeieDP~assv~f 329 (1022)
T KOG0961|consen 256 LSDIKESTVHTVEFP--TDDESRGAVEVAWFG----HSPSDLETHSALHVLFDYLSNSAVAPFQKDFVEIEDPLASSVSF 329 (1022)
T ss_pred cccCCccceeeeecC--CcccccceEEEEEcC----CCHHHhhhHHHHHHHHHHhccccccccccceEEecCccccceee
Confidence 122232222222333 235678888888886 44 567778889999998863 333333331 235555555
Q ss_pred eeeeeCCeeEEEEEEeCCCCChhHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHhcC
Q 003164 683 SPRVTYRVFGFCFCIQSSKYNPIYLQERIDNFISGLDELLEGLDDESFENYRSGLMAKLLEKDPSLTYESNRFWNQITDK 762 (843)
Q Consensus 683 ~~~~~~~~~~~~~~i~s~~~~~~~~~~~i~~~~~~~~~~l~~ite~el~~~k~~l~~~~~~~~~s~~~~~~~~~~~i~~~ 762 (843)
.....- ...+...+++ .-.+++...-..+++.+.+. ..++=+-.....++.+-++....++... ..+...++.
T Consensus 330 ~~~~~v-rc~i~L~f~g--VP~EKi~~~~~k~l~~l~et-~~iDm~Rm~~~i~~t~~~yL~nlE~n~~--s~fms~ii~- 402 (1022)
T KOG0961|consen 330 HIAEGV-RCDIRLNFAG--VPVEKIDECAPKFLDKLVET-ANIDMERMGYLIDQTILNYLVNLETNAP--SDFMSHIIG- 402 (1022)
T ss_pred eeeccc-ceeEEEeecC--CcHHHhhhhhHHHHHHHHHh-cccCHHHHHHHHHHHHHHHHHhhhcCCh--HHHHHHHhh-
Confidence 544221 1223334444 35677777777777655331 2343333333322222222222222111 111121211
Q ss_pred ccccc---------ccH--HHHHHHhcCCHHHHHHHHHHhhcc
Q 003164 763 RYMFD---------QSQ--KEAEDLKSIKKNDVISWYKTYLQQ 794 (843)
Q Consensus 763 ~~~~~---------~~~--~~~~~i~~it~edi~~~a~~~l~~ 794 (843)
++-++ ... .+.+.+.+-..+|-+++.+|||..
T Consensus 403 d~~ygnedg~~l~~~lk~l~~~~~L~~w~~kdW~~Llnk~Fve 445 (1022)
T KOG0961|consen 403 DQLYGNEDGELLKKRLKELDFLKKLKSWPAKDWVQLLNKYFVE 445 (1022)
T ss_pred hhhccCcchhHHHHHHHhHHHHHHHhhccHHHHHHHHHHHhcc
Confidence 11111 011 355677888899999999999975
No 27
>KOG2583 consensus Ubiquinol cytochrome c reductase, subunit QCR2 [Energy production and conversion]
Probab=97.82 E-value=0.0036 Score=64.15 Aligned_cols=285 Identities=13% Similarity=0.069 Sum_probs=157.5
Q ss_pred hhhhcchhccCCcchHHHHH-HhhHhHhhhhcCChHHHHHHHHHhhCCCCCCCCccccCcHhh-----hhhhhhcCccHH
Q 003164 2 RFSQFFISPLMKVEAMEREV-LAVDSEFNQALQNDACRLQQLQCHTSQLGHAFNKFFWGNKKS-----LIGAMEKGINLQ 75 (843)
Q Consensus 2 ~~~~~~~~p~~~~~~i~~Er-~vV~~E~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~G~~~~-----l~~~~~~~~~~~ 75 (843)
++.+...+|.|.|-+++.+. ..|..+.- ..+|..+..+.+-..+|- ..+||.-- +.+ .+.
T Consensus 121 ~L~~V~~~paFkPwEl~D~~~~ti~~~l~--~~t~~~~a~e~lH~aAfR------ngLgnslY~p~~~vg~------vss 186 (429)
T KOG2583|consen 121 LLGDVLDAPAFKPWELEDVVLATIDADLA--YQTPYTIAIEQLHAAAFR------NGLGNSLYSPGYQVGS------VSS 186 (429)
T ss_pred HHHHhhcccCcCchhhhhhhhhhhHHHhh--hcChHHHHHHHHHHHHHh------cccCCcccCCcccccC------ccH
Confidence 46788899999999999988 77777665 456766655544444442 23444311 233 788
Q ss_pred HHHHHHHHhccCccccEEEEecCCCHHHHHHHHHHhcccccCCCCCCCCCCcccccc-cccceEEEEEccCceEEEEEE-
Q 003164 76 EQIMKLYMNYYQGGLMKLVVIGGEPLDTLQSWVVELFANVRKGPQIKPQFTVEGTIW-KACKLFRLEAVKDVHILDLTW- 153 (843)
Q Consensus 76 ~~l~~fy~~~Y~p~nm~lvi~Gd~~~~~~~~~i~~~F~~~~~~~~~~~~~~~~~p~~-~~~~~~~~~~~~~~~~l~l~~- 153 (843)
++|++|=.++|...||.|+-+| +|.+.+....++++ .++.+..-.+. |.. .++.. +.. .......+.+
T Consensus 187 ~eL~~Fa~k~fv~gn~~lvg~n-vd~~~L~~~~~~~~-~~~~~~~~k~a-----~a~~~gGe~-Rk~--~~g~~~~v~va 256 (429)
T KOG2583|consen 187 SELKDFAAKHFVKGNAVLVGVN-VDHDDLKQFADEYA-PIRDGLPLKPA-----PAKYSGGEA-RKD--ARGNRVHVAVA 256 (429)
T ss_pred HHHHHHHHHHhhccceEEEecC-CChHHHHHHHHHhc-cccCCCCCCCC-----CccccCCcc-ccc--cCCceeEEEEe
Confidence 9999999999999999987665 66778888888873 44332211110 110 11111 110 1112222222
Q ss_pred ecCCchh-hhhcCcHHHHHHhhcCCCC----CcHHHHHhhcCcccccccccCCCCCccCCceeEEEEEEEcCHhhHHhHH
Q 003164 154 TLPCLHQ-EYLKKSEDYLAHLLGHEGR----GSLHSFLKGRGWATSISAGVGDEGMHRSSIAYIFVMSIHLTDSGLEKIF 228 (843)
Q Consensus 154 ~~p~~~~-~~~~~~~~~l~~ll~~~~~----~sL~~~L~~~~l~~~~~~~~~~~~~~~~~~~~~f~i~~~l~~~~~~~~~ 228 (843)
.-+.... .....+..++.+.|++..+ .+++..+-....-..+++......| ++.++|.+.+.... .+..
T Consensus 257 gegAAa~~~k~~~a~av~~~~Lg~~~~~k~~t~~~~~aa~~a~~~~~s~sA~~a~y---sDsGL~gv~~~~~~---~~a~ 330 (429)
T KOG2583|consen 257 GEGAAAGNLKVLAAQAVLLAALGNSAPVKRGTGLLSEAAGAAGEQGASASAFNAPY---SDSGLFGVYVSAQG---SQAG 330 (429)
T ss_pred cCcccccchHHHHHHHHHHHHHhcccccccccchHHHHHhhccccCceeeeecccc---cCCceEEEEEEecC---ccHH
Confidence 2222211 1112355677888887543 4555665532222222222211122 35678887776654 3566
Q ss_pred HHHHHHHHHHHHHHhcCCchhHHHHHHHhhhcccccCCCCChHHHHHHHHHhCCCCCccceeecCcccccCCHHHHHHHH
Q 003164 229 DIIGFVYQYIKLLRQVSPQKWIFKELQDIGNMEFRFAEEQPQDDYAAELAGNLLIYPAEHVIYGEYMYEVWDEEMIKHLL 308 (843)
Q Consensus 229 ~~~~~l~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l 308 (843)
++++.....+......+++-.....+.++...... ...+ +.........++. .+++.+++ -++++++.+|.+.+
T Consensus 331 ~~v~s~v~~lks~~~~~id~~~~~a~~~~l~~~~~-ss~~-a~~~~~~~~a~~~-~~~d~~i~---~id~Vt~sdV~~a~ 404 (429)
T KOG2583|consen 331 KVVSSEVKKLKSALVSDIDNAKVKAAIKALKASYL-SSVE-ALELATGSQANLV-SEPDAFIQ---QIDKVTASDVQKAA 404 (429)
T ss_pred HHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHhh-cchH-HHHHhhHHHhcCC-CChHHHHH---HhccccHHHHHHHH
Confidence 77777777777777777765444444443332221 2111 2233333322222 25666555 37788999999998
Q ss_pred hccCcCceEEEEEe
Q 003164 309 GFFMPENMRIDVVS 322 (843)
Q Consensus 309 ~~l~~~~~~~~~~~ 322 (843)
+.+...++.+.-.+
T Consensus 405 kk~~s~kls~aA~G 418 (429)
T KOG2583|consen 405 KKFLSGKLSLAAYG 418 (429)
T ss_pred HHhccCcceeeeec
Confidence 77766665554333
No 28
>PF00675 Peptidase_M16: Insulinase (Peptidase family M16) This is family M16 in the peptidase classification. ; InterPro: IPR011765 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. The majority of the sequences in this entry are metallopeptidases and non-peptidase homologs belong to MEROPS peptidase family M16 (clan ME), subfamilies M16A, M16B and M16C; they include: Insulinase, insulin-degrading enzyme (3.4.24.56 from EC) Mitochondrial processing peptidase alpha subunit, (Alpha-MPP, 3.4.24.64 from EC) Pitrlysin, Protease III precursor (3.4.24.55 from EC) Nardilysin, (3.4.24.61 from EC) Ubiquinol-cytochrome C reductase complex core protein I,mitochondrial precursor (1.10.2.2 from EC) Coenzyme PQQ synthesis protein F (3.4.99 from EC) These proteins do not share many regions of sequence similarity; the most noticeable is in the N-terminal section. This region includes a conserved histidine followed, two residues later by a glutamate and another histidine. In pitrilysin, it has been shown [] that this H-x-x-E-H motif is involved in enzymatic activity; the two histidines bind zinc and the glutamate is necessary for catalytic activity. The proteins classified as non-peptidase homologues either have been found experimentally to be without peptidase activity, or lack amino acid residues that are believed to be essential for the catalytic activity. ; GO: 0004222 metalloendopeptidase activity, 0006508 proteolysis; PDB: 3P7L_A 3P7O_A 3TUV_A 3GO9_A 1BE3_B 1PP9_B 2A06_B 1SQB_B 1SQP_B 1L0N_B ....
Probab=97.42 E-value=5.7e-05 Score=70.19 Aligned_cols=60 Identities=17% Similarity=0.214 Sum_probs=54.8
Q ss_pred ChhhhcchhccCCcchHHHHHHhhHhHhhhhcCChHHHHHHHHHhhCCCCCCCCccccCc
Q 003164 1 MRFSQFFISPLMKVEAMEREVLAVDSEFNQALQNDACRLQQLQCHTSQLGHAFNKFFWGN 60 (843)
Q Consensus 1 ~~~~~~~~~p~~~~~~i~~Er~vV~~E~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~G~ 60 (843)
+++++++.+|.|++++|++||..+..|++....+|..++.+.+...+|.+|||+++..|+
T Consensus 89 ~~l~~~~~~P~f~~~~~~~~r~~~~~ei~~~~~~~~~~~~~~l~~~~f~~~p~~~~~~~~ 148 (149)
T PF00675_consen 89 ELLADMLFNPSFDEEEFEREREQILQEIEEIKENPQELAFEKLHSAAFRGHPYGNPLLGP 148 (149)
T ss_dssp HHHHHHHHSBGGCHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHTTSGGGSHSS-T
T ss_pred HHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHhccCCCCCCCCCC
Confidence 368999999999999999999999999999988898888888899999999999998886
No 29
>PF08367 M16C_assoc: Peptidase M16C associated; InterPro: IPR013578 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This domain appears in eukaryotes as well as bacteria and tends to be found near the C terminus of metalloproteases and related sequences belonging to MEROPS peptidase family M16 (subfamily M16C, clan ME). These include: eupitrilysin, falcilysin, PreP peptidase, CYM1 peptidase and subfamily M16C non-peptidase homologues.; GO: 0008237 metallopeptidase activity, 0008270 zinc ion binding, 0006508 proteolysis; PDB: 2FGE_B 3S5I_A 3S5H_A 3S5M_A 3S5K_A.
Probab=96.86 E-value=0.0035 Score=63.48 Aligned_cols=122 Identities=14% Similarity=0.133 Sum_probs=78.4
Q ss_pred CeEEecCCCeEEEEecCCccCCcceeEEEEEecCCCCCCHHHHHHHHHHHHHHHHHHH------H--HhHHhhhcccEeE
Q 003164 394 PTCIIDEPLIRFWYKLDNTFKLPRANTYFRINLKGGYDNVKNCILTELFIHLLKDELN------E--IIYQASVAKLETS 465 (843)
Q Consensus 394 p~~~~~~ng~~v~~~~~~~~~~p~~~i~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~------~--~~~~~~~~g~~~~ 465 (843)
|......+|++|++++..+ ++.+|+++.++....+.+...++.|++.+++...+ + .......+|++++
T Consensus 70 ~~~~~~~~~~~v~~~~~~T----nGI~Y~~l~fdl~~l~~e~l~yl~Ll~~ll~~lgT~~~sy~el~~~i~~~tGGis~~ 145 (248)
T PF08367_consen 70 PLEVEKLGGIPVLFHEQPT----NGIVYVRLYFDLSDLPEEDLPYLPLLTDLLGELGTKNYSYEELSNEIDLYTGGISFS 145 (248)
T ss_dssp --EECCCTTCEEEEEE-------TTEEEEEEEEE-TTS-CCCHCCHHHHHHHCCCS-BSSS-HHHHHHHHHHHSSEEEEE
T ss_pred CceeeecCCccEEEEEcCC----CCeEEEEEEecCCCCCHHHHHhHHHHHHHHHhCCCCCCCHHHHHHHHHHhCCCeEEE
Confidence 4344455799999998765 35666666665554455667788888888753211 1 1223346788877
Q ss_pred EEEec---------ceeEEEEcccCCCHHHHHHHHHHHHhcCCCCHH-HHHHHHHHHHHHHhcC
Q 003164 466 VSIFS---------DKLELKVYGFNDKLPVLLSKILAIAKSFLPSDD-RFKVIKEDVVRTLKNT 519 (843)
Q Consensus 466 ~~~~~---------~~~~~~~~g~s~~~~~~l~ll~~~l~~p~~~~~-~~~~~k~~~~~~l~~~ 519 (843)
+.... .++.++.+++.++++.+++++.++++++.|+.. ++..+..+.+..+++.
T Consensus 146 ~~~~~~~~~~~~~~~~l~is~k~L~~~~~~~~~ll~eil~~~~f~d~~rl~~ll~~~~s~~~~~ 209 (248)
T PF08367_consen 146 IEVYTDYDDDDKYRPYLVISAKCLDEKLDEAFELLSEILTETDFDDKERLKELLKELKSDMESS 209 (248)
T ss_dssp EEEEEEECTECCCEEEEEEEEEEEGGGHHHHHHHHHHHHHCB-TT-HHHHHHHHHHHHHHHHHH
T ss_pred eeeccCCCCccceeEEEEEEEEeHhhhHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHHHHh
Confidence 75532 468999999999999999999999999999864 6665555555555554
No 30
>PHA03081 putative metalloprotease; Provisional
Probab=51.75 E-value=1.9e+02 Score=31.60 Aligned_cols=184 Identities=14% Similarity=0.151 Sum_probs=84.3
Q ss_pred EecCCCeEEEEecCCccCCcceeEEEEEecCCCCCC-HHHHHHHHHHHHHHHHHHHHHhHHhhhcccEeEEEE-ecceeE
Q 003164 397 IIDEPLIRFWYKLDNTFKLPRANTYFRINLKGGYDN-VKNCILTELFIHLLKDELNEIIYQASVAKLETSVSI-FSDKLE 474 (843)
Q Consensus 397 ~~~~ng~~v~~~~~~~~~~p~~~i~~~~~~~~~~~~-~~~~~~~~l~~~~l~~~~~~~~~~~~~~g~~~~~~~-~~~~~~ 474 (843)
+.++||++++..++-. -.+++-+..-|...+ .+-.++++|+.+++-+- +. ....+..+ ..- .-.-.+
T Consensus 2 i~~~ngvr~f~~~~m~-----kdiy~gi~~fgfe~di~~~lg~ahllehili~f-d~---~~f~anas--t~r~ymsfwc 70 (595)
T PHA03081 2 IVLSNGVRIFINPSMK-----KDIYLGISNFGFENDIGEILGIAHLLEHILISF-DS---SKFVANAS--TARSYMSFWC 70 (595)
T ss_pred eEecCceEEEecCccc-----cceEEeecccccccchHHHHhHHHHHHHHeeec-ch---HHhcccch--hhhhhHhHhh
Confidence 5789999999998653 256666544333322 34567777777765321 11 11111111 000 001122
Q ss_pred EEEcccCCCHHHHHHHHHHHHhcCCCCHHHHHHHH-HHHHHHHhcCcC--ChhhHHHHHHHHhhccCCCCHHHHHHHhcc
Q 003164 475 LKVYGFNDKLPVLLSKILAIAKSFLPSDDRFKVIK-EDVVRTLKNTNM--KPLSHSSYLRLQVLCQSFYDVDEKLSILHG 551 (843)
Q Consensus 475 ~~~~g~s~~~~~~l~ll~~~l~~p~~~~~~~~~~k-~~~~~~l~~~~~--~p~~~~~~~~~~~l~~~~~~~~~~~~~l~~ 551 (843)
.++.|.+ ..+++..+..-+....-=.+.|...+ +.-+.++++..- +-.-..++.+..+-.+..|. -|+...|..
T Consensus 71 ~sirg~~--y~DAvrtliSWFF~~~~Lr~~F~~~~ik~~ikELENEYYFRnEvfHCmDvLTfL~gGDLYN-GGRi~ML~~ 147 (595)
T PHA03081 71 KSIRGRS--YIDAIRTLISWFFDNGKLKDNFSLSKIRNHIKELENEYYFRNEVFHCMDVLTFLGGGDLYN-GGRIDMLDN 147 (595)
T ss_pred HhhcCCc--hHHHHHHHHHHhccCCccccccchhhHHHHHHHHhhhhhhhhhhHHHHHHHHHhcCCcccC-CchHHHHhh
Confidence 3344444 34555555555544432122232221 233444444321 22224455554443444441 122333333
Q ss_pred CCHHHHHHHHHH-H--HhhhceeeeeecCCCHHHHHHHHHHHHhhcCCCC
Q 003164 552 LSLADLMAFIPE-L--RSQLYIEGLCHGNLSQEEAIHISNIFKSIFSVQP 598 (843)
Q Consensus 552 it~edl~~~~~~-~--~~~~~~~~~i~Gdi~~~~~~~~~~~~~~~l~~~~ 598 (843)
+ ++++..... + ...-|+. +.+-.++ +.+..+++..+|.+|.-|
T Consensus 148 l--~~i~~~L~~RM~~I~GpniV-IFVk~ln-~~~l~lL~~TFGtLP~~P 193 (595)
T PHA03081 148 L--NDVRDMLSNRMHRISGPNIV-IFVKELN-PNTLSLLNNTFGTLPSCP 193 (595)
T ss_pred h--HHHHHHHHHHHHhhcCCcEE-EEEeccC-HHHHHHHHHhcCCCCCCc
Confidence 2 233333222 2 2222544 4445555 456678999999999754
No 31
>PF03410 Peptidase_M44: Protein G1; InterPro: IPR005072 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of metallopeptidases belong to MEROPS peptidase family M44 (clan ME). The active site residues for members of this family and family M16 occur in the motif HXXEHProtein. The type example is the vaccinia virus-type metalloendopeptidase G1 from vaccinia virus, it is a metalloendopeptidase expressed by many Poxviridae which appears to play a role in the maturation of viral proteins.; GO: 0004222 metalloendopeptidase activity, 0008270 zinc ion binding, 0019067 viral assembly, maturation, egress, and release
Probab=40.76 E-value=5.4e+02 Score=28.39 Aligned_cols=183 Identities=13% Similarity=0.038 Sum_probs=82.9
Q ss_pred EecCCCeEEEEecCCccCCcceeEEEEEecCCCCCC-HHHHHHHHHHHHHHHHHHHHHhHHhhhcccEeEEEEecce---
Q 003164 397 IIDEPLIRFWYKLDNTFKLPRANTYFRINLKGGYDN-VKNCILTELFIHLLKDELNEIIYQASVAKLETSVSIFSDK--- 472 (843)
Q Consensus 397 ~~~~ng~~v~~~~~~~~~~p~~~i~~~~~~~~~~~~-~~~~~~~~l~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~--- 472 (843)
+.++||++|+..++-. -.|++-+.+-|...+ .+-.|+++|+.+++=+- +. ....|.++ .....
T Consensus 2 IvL~NGVRiFin~~M~-----KDIYlGIs~FGFe~DI~~iLGiAHLLEHILIsF-D~---~~F~ANAS----TaRsYMSF 68 (590)
T PF03410_consen 2 IVLSNGVRIFINPSMK-----KDIYLGISNFGFENDIGEILGIAHLLEHILISF-DS---SKFLANAS----TARSYMSF 68 (590)
T ss_pred eEecCceEEEecCccc-----cceEEeecccccccchHHHHhHHHHHHHHeeec-ch---HHhhcccc----hhhhhhhh
Confidence 5789999999998753 256766644443322 34577888888775321 11 11111111 01111
Q ss_pred eEEEEccc--CCCHHHHHHHHHHHH-hcCCCCHHHHHHHHHHHHHHHhcCcCChhhHHHHHHHHhhccCCC--CHHHHHH
Q 003164 473 LELKVYGF--NDKLPVLLSKILAIA-KSFLPSDDRFKVIKEDVVRTLKNTNMKPLSHSSYLRLQVLCQSFY--DVDEKLS 547 (843)
Q Consensus 473 ~~~~~~g~--s~~~~~~l~ll~~~l-~~p~~~~~~~~~~k~~~~~~l~~~~~~p~~~~~~~~~~~l~~~~~--~~~~~~~ 547 (843)
.+-++.|. .+.+.+++.++.+.= ..-.|+...++.-..++.+++--. +-.-..++.+..+-.+..| ++...++
T Consensus 69 WC~si~g~~~~DAvrtliSWFF~~g~Lk~~F~~~~i~~hikELENEYYFR--nEvfHCmDvLtfL~gGDLYNGGRi~ML~ 146 (590)
T PF03410_consen 69 WCKSIRGRTYIDAVRTLISWFFDNGKLKDNFSRSKIKNHIKELENEYYFR--NEVFHCMDVLTFLGGGDLYNGGRIDMLN 146 (590)
T ss_pred hhhhccCCChhHHHHHHHHHhhcCCcccccccHhHHHHHHHHHhhhhhhh--hhHHHHHHHHHHhcCCcccCCchHHHHh
Confidence 22233333 223344444444310 001244444443333333332111 2223445555444344444 2333333
Q ss_pred HhccCCHHHHHHHHHHHHhhhceeeeeecCCCHHHHHHHHHHHHhhcCCCC
Q 003164 548 ILHGLSLADLMAFIPELRSQLYIEGLCHGNLSQEEAIHISNIFKSIFSVQP 598 (843)
Q Consensus 548 ~l~~it~edl~~~~~~~~~~~~~~~~i~Gdi~~~~~~~~~~~~~~~l~~~~ 598 (843)
.+..+ .+-+.+-.++.-+| |+.+ .+-.++ +.+..+++..+|.+|.-|
T Consensus 147 ~l~~i-~~mL~~RM~~I~Gp-niVI-FVk~l~-~~~l~lL~~TFGtLP~cP 193 (590)
T PF03410_consen 147 NLNDI-RNMLSNRMHRIIGP-NIVI-FVKELN-PNILSLLSNTFGTLPSCP 193 (590)
T ss_pred hhHHH-HHHHHHHHHhhcCC-cEEE-EEeccC-HHHHHHHHHhcCCCCCCc
Confidence 33222 11222222222333 5444 445555 456678999999998654
No 32
>PF09851 SHOCT: Short C-terminal domain; InterPro: IPR018649 This family of hypothetical prokaryotic proteins has no known function.
Probab=39.64 E-value=49 Score=20.91 Aligned_cols=16 Identities=19% Similarity=0.524 Sum_probs=13.7
Q ss_pred hcCCHHHHHHHHHHHH
Q 003164 723 EGLDDESFENYRSGLM 738 (843)
Q Consensus 723 ~~ite~el~~~k~~l~ 738 (843)
+-+|++|+++.|..++
T Consensus 15 G~IseeEy~~~k~~ll 30 (31)
T PF09851_consen 15 GEISEEEYEQKKARLL 30 (31)
T ss_pred CCCCHHHHHHHHHHHh
Confidence 4589999999998875
No 33
>PRK11512 DNA-binding transcriptional repressor MarR; Provisional
Probab=36.96 E-value=1.5e+02 Score=26.73 Aligned_cols=66 Identities=15% Similarity=0.068 Sum_probs=39.6
Q ss_pred HHHHHhhcCcccccccccCCCCCccCCceeEEEEEEEcCHhhHHhHHHHHHHHHHHHHHHHhcCCchhHHHHHHHhh
Q 003164 182 LHSFLKGRGWATSISAGVGDEGMHRSSIAYIFVMSIHLTDSGLEKIFDIIGFVYQYIKLLRQVSPQKWIFKELQDIG 258 (843)
Q Consensus 182 L~~~L~~~~l~~~~~~~~~~~~~~~~~~~~~f~i~~~l~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~~~~~~ 258 (843)
+...|.++||+........ +. ...+.+|++|.+-.+++...+...+..-...++++++.+.+....
T Consensus 74 ~l~~Le~~GlI~R~~~~~D-------rR----~~~l~LT~~G~~~~~~~~~~~~~~~~~~l~~~ls~ee~~~l~~~L 139 (144)
T PRK11512 74 MLDRLVCKGWVERLPNPND-------KR----GVLVKLTTSGAAICEQCHQLVGQDLHQELTKNLTADEVATLEHLL 139 (144)
T ss_pred HHHHHHHCCCEEeccCccc-------CC----eeEeEEChhHHHHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHH
Confidence 4567888999976544321 11 234668888865555554544434433334689998887766544
No 34
>PF05120 GvpG: Gas vesicle protein G ; InterPro: IPR007804 Gas vesicles are intracellular, protein-coated, and hollow organelles found in cyanobacteria and halophilic archaea. They are permeable to ambient gases by diffusion and provide buoyancy, enabling cells to move upwards in water to access oxygen and/or light. Proteins containing this family are involved in the formation of gas vesicles [].
Probab=30.22 E-value=1.6e+02 Score=23.56 Aligned_cols=39 Identities=21% Similarity=0.500 Sum_probs=28.3
Q ss_pred CChhHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHc
Q 003164 702 YNPIYLQERIDNFISGLDELLEGLDDESFENYRSGLMAKLL 742 (843)
Q Consensus 702 ~~~~~~~~~i~~~~~~~~~~l~~ite~el~~~k~~l~~~~~ 742 (843)
+||..+...+.+.-..+.. ..||++++++....++..+.
T Consensus 28 ~Dp~~i~~~L~~L~~~~e~--GEIseeEf~~~E~eLL~rL~ 66 (79)
T PF05120_consen 28 YDPAAIRRELAELQEALEA--GEISEEEFERREDELLDRLE 66 (79)
T ss_pred cCHHHHHHHHHHHHHHHHc--CCCCHHHHHHHHHHHHHHHH
Confidence 4787666666654433332 67999999999999988875
No 35
>PRK03573 transcriptional regulator SlyA; Provisional
Probab=30.17 E-value=2.4e+02 Score=25.46 Aligned_cols=65 Identities=11% Similarity=0.041 Sum_probs=39.7
Q ss_pred HHHHHhhcCcccccccccCCCCCccCCceeEEEEEEEcCHhhHHhHHHHHHHHHHHHHHHHhcCCchhHHHHHHHhh
Q 003164 182 LHSFLKGRGWATSISAGVGDEGMHRSSIAYIFVMSIHLTDSGLEKIFDIIGFVYQYIKLLRQVSPQKWIFKELQDIG 258 (843)
Q Consensus 182 L~~~L~~~~l~~~~~~~~~~~~~~~~~~~~~f~i~~~l~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~~~~~~ 258 (843)
+...|.++||+........ +. ...+.+|++|.+-.+++........+.+ -.++++++.+.+....
T Consensus 66 ~v~~Le~~GlV~r~~~~~D-------rR----~~~l~LT~~G~~~~~~~~~~~~~~~~~~-~~~l~~ee~~~l~~~l 130 (144)
T PRK03573 66 TLDQLEEKGLISRQTCASD-------RR----AKRIKLTEKAEPLISEVEAVINKTRAEI-LHGISAEEIEQLITLI 130 (144)
T ss_pred HHHHHHHCCCEeeecCCCC-------cC----eeeeEEChHHHHHHHHHHHHHHHHHHHH-HhCCCHHHHHHHHHHH
Confidence 4467788999976554321 11 2346788888765555554444444444 4689988777765544
No 36
>PRK10870 transcriptional repressor MprA; Provisional
Probab=28.79 E-value=2.5e+02 Score=26.48 Aligned_cols=65 Identities=17% Similarity=0.238 Sum_probs=42.7
Q ss_pred HHHHHhhcCcccccccccCCCCCccCCceeEEEEEEEcCHhhHHhHHHHHHHHHHHHHHHHhcCCchhHHHHHHHhh
Q 003164 182 LHSFLKGRGWATSISAGVGDEGMHRSSIAYIFVMSIHLTDSGLEKIFDIIGFVYQYIKLLRQVSPQKWIFKELQDIG 258 (843)
Q Consensus 182 L~~~L~~~~l~~~~~~~~~~~~~~~~~~~~~f~i~~~l~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~~~~~~ 258 (843)
+...|.++||+........ +. ...+.+|+.|.+-.+++.....+..+.+. .++++++.+.+....
T Consensus 91 ~v~rLe~kGlV~R~~~~~D-------rR----~~~v~LT~~G~~~~~~i~~~~~~~~~~~~-~~ls~~e~~~l~~~L 155 (176)
T PRK10870 91 IADELEKRGWIERRESDND-------RR----CLHLQLTEKGHEFLREVLPPQHNCLHQLW-SALSTTEKDQLEQIT 155 (176)
T ss_pred HHHHHHHCCCEEecCCCCC-------CC----eeEEEECHHHHHHHHHHHHHHHHHHHHHH-hcCCHHHHHHHHHHH
Confidence 4567888999876543321 11 13467889987777777776666666654 588987777655544
No 37
>KOG1387 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=21.49 E-value=1.5e+02 Score=30.96 Aligned_cols=51 Identities=14% Similarity=0.124 Sum_probs=37.3
Q ss_pred CCCCccccCcHhhhhhhhhcCccHHHHHHHHHHhccCccccEEEEecCC--CHHHHHHHHHHhcc
Q 003164 51 HAFNKFFWGNKKSLIGAMEKGINLQEQIMKLYMNYYQGGLMKLVVIGGE--PLDTLQSWVVELFA 113 (843)
Q Consensus 51 ~p~~~~~~G~~~~l~~~~~~~~~~~~~l~~fy~~~Y~p~nm~lvi~Gd~--~~~~~~~~i~~~F~ 113 (843)
|||-.-..|-+..|.. +.+.-.++| |+|..+|-.||+ +++++...++..|+
T Consensus 50 HPYCNAGGGGErVLW~------Avr~~q~k~------~n~~~viYsGD~n~t~~~IL~k~k~~F~ 102 (465)
T KOG1387|consen 50 HPYCNAGGGGERVLWK------AVRITQRKF------PNNVIVIYSGDFNVTPENILNKVKNKFD 102 (465)
T ss_pred cccccCCCCcceehhH------HHHHHHHhC------CCceEEEEeCCCCCCHHHHHHHHHHhcC
Confidence 8987777787777765 434333333 888888888985 56788888888885
Done!