BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 003173
(842 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8H1U5|APC2_ARATH Anaphase-promoting complex subunit 2 OS=Arabidopsis thaliana
GN=APC2 PE=1 SV=1
Length = 865
Score = 1092 bits (2824), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 562/838 (67%), Positives = 663/838 (79%), Gaps = 34/838 (4%)
Query: 1 MEESTSMYCNLGILEKLNDESVQEIIESYNGFCATTNSLLNGGRDIAVGKEFVTHVRSLC 60
ME S CNL ILE L+D+++QEI ESY+GF T SL+ G D V EFV+HV LC
Sbjct: 1 MEALGSSDCNLEILETLSDDAIQEITESYDGFFTTVESLIAGTGDSLVEDEFVSHVYCLC 60
Query: 61 KHGLQSLAHGHFLRSLEETFERTFVSKFWRHFDVYSKVAVLEKNKPLIYDDEVHEVLCKA 120
K+GL SL HFLRSLE+ FE+ S FW+HFD YS+ K Y +E+ VLCKA
Sbjct: 61 KYGLDSLVRDHFLRSLEQAFEKGGASSFWQHFDAYSE------KKHHNYGEEIQIVLCKA 114
Query: 121 LEEICMEIQYQEKCLFMLVHAIESPRDCSLEGKPILDSE-VHLFAKYQLMVSSVLMASLP 179
LEEI +E QY EKCL ++VHA++S ++ S + + D+E VHLF+++Q M+SS LM +LP
Sbjct: 115 LEEISIEKQYHEKCLSIVVHALQSFKEQSSDDRQNSDTERVHLFSRFQSMLSSTLMTTLP 174
Query: 180 PHFPEMLYWYFKGRLEELSTIMDGELEDGNDSQDKDDMDLDEKGKQRTGEMDIDQSNNHG 239
HFPE+L+WYFK RLEELS IMDG DG + Q+ D MDLDEK + + GEMD+D+ + G
Sbjct: 175 QHFPEILHWYFKERLEELSAIMDG---DGIEEQEDDCMDLDEKLRYKNGEMDVDEGCSQG 231
Query: 240 KFSEKSKLVKHIGKVVHDLRTLGFTSMTENAYASAIFSLLKAKVHNLAGEDYRSSVLEPI 299
K KLVK+IGKVV DLR++GFTSM ENAYASAIF LLKAKVH+LAG+DYR+SVLE I
Sbjct: 232 KRLGHDKLVKNIGKVVRDLRSIGFTSMAENAYASAIFLLLKAKVHDLAGDDYRTSVLESI 291
Query: 300 KAWIQAVPLQFLNALLAYLGESESYDSPTAGLKSPLASRPLCCPGTH-----NPSEGLVR 354
K WIQ VPLQFLNALL+YLG+S SY + ++GL SPLA CCP PSEG+VR
Sbjct: 292 KEWIQTVPLQFLNALLSYLGDSVSYGTTSSGLTSPLA----CCPSPSFSRVVTPSEGIVR 347
Query: 355 WRLRLEYFAYETLQDLRIAKLFEIIVDYPESSPAIEDLKQCLEYTGQHSKLVESFISALK 414
W+LRLEYFAYETLQDLRIAKLFEIIVDYPESSPAIEDLKQCLEYTGQHSKLVESFIS+LK
Sbjct: 348 WKLRLEYFAYETLQDLRIAKLFEIIVDYPESSPAIEDLKQCLEYTGQHSKLVESFISSLK 407
Query: 415 YRLLTAGASTNDILHQYVSTIKALRTIDPTGVFLEAVGEPIRDYLRGRKDTIKCIVTMLT 474
YRLLTAGASTNDILHQYVSTIKALR IDP GVFLEAVGEPIRDYLRGRKDTIKCIVTMLT
Sbjct: 408 YRLLTAGASTNDILHQYVSTIKALRAIDPAGVFLEAVGEPIRDYLRGRKDTIKCIVTMLT 467
Query: 475 DGTGGNPNGSGNAGDSLLEELNRDEENQENIGVDDGFNIDDKQAWINAVCWEPDPVEADP 534
DG+GGN NGSGN GDSLLEEL RDEE+QEN+G DD F+ DDKQAWINA WEPDPVEADP
Sbjct: 468 DGSGGNANGSGNPGDSLLEELMRDEESQENVGFDDDFHTDDKQAWINASRWEPDPVEADP 527
Query: 535 LKGSRNRRKVDILGMIVGIIGSKDQLVNEYRVMLADKLLNKSDYEIDSEIRTLELLKIHF 594
LKGS ++RKVDILGM+V IIGSK+QLVNEYRVMLA+KLLNK+DY+ID+EIRT+ELLKIHF
Sbjct: 528 LKGSLSQRKVDILGMLVDIIGSKEQLVNEYRVMLAEKLLNKTDYDIDTEIRTVELLKIHF 587
Query: 595 GESSMQRCEIMLNDLIDSKRTNANIKATIEKQSLAGSELGEEGVSLGLLDATIISSNFWP 654
GE+SMQRCEIMLNDLIDSKR N NIK K S G+EL E +S+ L +TI+S+NFWP
Sbjct: 588 GEASMQRCEIMLNDLIDSKRVNTNIK----KASQTGAELRENELSVDTLTSTILSTNFWP 643
Query: 655 PMQDEALIVPGHIDQLLADYAKRFNEIKTPRKLLWKKNLGTVKLELQFDDRAMQFTVAPI 714
P+QDE L +PG +D+LL+DYA R++EIKTPRKLLWKKNLGTVKLELQF+DRAMQFTV+P
Sbjct: 644 PIQDEPLELPGPVDKLLSDYANRYHEIKTPRKLLWKKNLGTVKLELQFEDRAMQFTVSPT 703
Query: 715 HAAIIMQFQDQTSWTSKNLAAAVGVPVDVLSRRINFWISKGIIKESVGTGSNDHLYNLVE 774
HAAIIMQFQ++ SWT K+LA +G+P+D L+RR+NFWISKG+++ES G SN + LVE
Sbjct: 704 HAAIIMQFQEKKSWTYKDLAEVIGIPIDALNRRVNFWISKGVLRESTGANSNSSVLTLVE 763
Query: 775 GMVDSSKNGDNTGSCEELLGGDEDGERSVASVEDQIRNEMTVYEPTLFLVRYVANILT 832
+ DS KN E GE S+ASVEDQ+R EMT+YE +++ +LT
Sbjct: 764 SITDSGKNEGEELLTGEEE-----GETSIASVEDQLRKEMTIYE------KFIMGMLT 810
>sp|Q9UJX6|ANC2_HUMAN Anaphase-promoting complex subunit 2 OS=Homo sapiens GN=ANAPC2 PE=1
SV=1
Length = 822
Score = 344 bits (882), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 212/590 (35%), Positives = 319/590 (54%), Gaps = 63/590 (10%)
Query: 250 HIGKVVHDLRTLGFTSMTENAYASAIFSLLKAKVHNLAGEDYRSSVLEPIKAWIQAVPLQ 309
+ +V+H L L ++ A + + + + ++ + +Y S L WI+ V
Sbjct: 242 QLSQVLHRLSLL--ERVSAEAVTTTLHQVTRERMEDRCRGEYERSFLREFHKWIERV--- 296
Query: 310 FLNALLAYLGESESYDSPTAGLKSPLASRPLCCPGTHNPSEGLVRWRLRLEYFAYETLQD 369
+ +LG+ D P P + L RWR ++ F Y
Sbjct: 297 -----VGWLGKVFLQDGPAR-------------PASPEAGNTLRRWRCHVQRFFYRIYAS 338
Query: 370 LRIAKLFEIIVDYPESSPAIEDLKQCLEYTGQHSKLVESFISALKYRLLTAGASTNDILH 429
LRI +LF I+ D+P+S PAIEDLK CLE T Q +L+ S +AL+ RLL G +T DI+
Sbjct: 339 LRIEELFSIVRDFPDSRPAIEDLKYCLERTDQRQQLLVSLKAALETRLLHPGVNTCDIIT 398
Query: 430 QYVSTIKALRTIDPTGVFLEAVGEPIRDYLRGRKDTIKCIVTMLTDGTGGNPNGSGNAGD 489
Y+S IKALR +DP+ V LE EPIR YLR R+DT++ IV LT G+ +G+G+
Sbjct: 399 LYISAIKALRVLDPSMVILEVACEPIRRYLRTREDTVRQIVAGLT----GDSDGTGD--- 451
Query: 490 SLLEELNRDEENQENIGVDDGFNIDDKQAWINAVCWEPDPVEADPLKGSRNRRKVDILGM 549
L EL++ + G D + + + W+ PDPV+ADP K S RR DI+ +
Sbjct: 452 -LAVELSKTDPASLETGQDSEDDSGEPEDWV------PDPVDADPGKSSSKRRSSDIISL 504
Query: 550 IVGIIGSKDQLVNEYRVMLADKLLNKSDYEIDSEIRTLELLKIHFGESSMQRCEIMLNDL 609
+V I GSKD +NEYR +LAD+LL++ + + EIR +ELLK+ FGE+ M CE+ML D+
Sbjct: 505 LVSIYGSKDLFINEYRSLLADRLLHQFSFSPEREIRNVELLKLRFGEAPMHFCEVMLKDM 564
Query: 610 IDSKRTNANIKATIEKQSLAGSELGEEGVSLGLLDATIISSNFWPPMQDEALIVPGHIDQ 669
DS+R NANI+ EK+ EE G+ A I+SS FWPP +DE L VP I
Sbjct: 565 ADSRRINANIREEDEKRP------AEEQPPFGVY-AVILSSEFWPPFKDEKLEVPEDIRA 617
Query: 670 LLADYAKRFNEIKTPRKLLWKKNLGTVKLELQFDDRAMQFTVAPIHAAIIMQFQDQTSWT 729
L Y K++ ++K R L WK LG V ++++ DR + V P+ A I++ FQDQ SWT
Sbjct: 618 ALEAYCKKYEQLKAMRTLSWKHTLGLVTMDVELADRTLSVAVTPVQAVILLYFQDQASWT 677
Query: 730 SKNLAAAVGVPVDVLSRRINFWISKGIIK-ESVGTGSNDHLYNLVEGMVDSSKNGDNTGS 788
+ L+ AV +PV +L RR++ W+ +G+++ E GT ++++E + ++ DN
Sbjct: 678 LEELSKAVKMPVALLRRRMSVWLQQGVLREEPPGT------FSVIEE--ERPQDRDNMV- 728
Query: 789 CEELLGGDEDGERSVASVEDQIRNEMTVYEPTLFLVRYVANILTQKSLLS 838
L+ D++ + +AS DQ E+ L Y+ +LT LS
Sbjct: 729 ---LIDSDDESDSGMASQADQKEEEL------LLFWTYIQAMLTNLESLS 769
>sp|Q8BZQ7|ANC2_MOUSE Anaphase-promoting complex subunit 2 OS=Mus musculus GN=Anapc2 PE=1
SV=2
Length = 837
Score = 343 bits (879), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 250/794 (31%), Positives = 389/794 (48%), Gaps = 82/794 (10%)
Query: 50 KEFVTHVRSLCKHGLQSLAHGHFLRSLEETFERTFVSKFWRHFDVYSKVAVLEKNKPLIY 109
+E V L HGL S+ F+ L+ + ++FW N +
Sbjct: 68 EELRAAVEVLRGHGLHSVLEEWFVEVLQNDLQGNIATEFW--------------NAIALR 113
Query: 110 DDEVHEVLCKALEEICMEIQYQEKCLFMLVHAIESPRDCSLEGKPILDSEVHLFAKYQLM 169
++ V E C L + E L +H++E + G + L K M
Sbjct: 114 ENSVDEPQCLGL--LLDAFGLLESRLDPYLHSLELLEKWTRLGLLMGAGAQGLREKVHTM 171
Query: 170 VSSVLMASLPPHFPEMLYWYFKGRLEELSTIMDGELEDGNDSQDKDDMDLDEKGKQRTGE 229
+ VL S P F EM+ + GR + + E G D + + ++D ++
Sbjct: 172 LRGVLFFSTPRTFQEMVQRLY-GRFLRVYMQSKRKGEGGTDPELEGELDSRYARRRYYRL 230
Query: 230 MDIDQSNNHGKFSEKSKLVKHIGKVVHDLRTLGFTSMTENAYASAIFSLL----KAKVHN 285
+ G ++ + + + + L S+ E A A+ + L + ++ +
Sbjct: 231 LQSPLCAGCGSDKQQCWCRQALEQFNQLSQVLHRLSLLERVCAEAVTTTLHQVTRERMED 290
Query: 286 LAGEDYRSSVLEPIKAWIQAVPLQFLNALLAYLGESESYDSPTAGLKSPLASRPLCCPGT 345
+Y S L WI+ V + +LG+ D+PT P +
Sbjct: 291 RCRGEYERSFLREFHKWIERV--------VGWLGKVFLQDNPTR-------------PTS 329
Query: 346 HNPSEGLVRWRLRLEYFAYETLQDLRIAKLFEIIVDYPESSPAIEDLKQCLEYTGQHSKL 405
L RWR ++ F Y LRI +LF II D+P+S PAIEDLK CLE T Q +L
Sbjct: 330 PEAGNTLRRWRCHVQRFFYRIYATLRIEELFSIIRDFPDSRPAIEDLKYCLERTDQRQQL 389
Query: 406 VESFISALKYRLLTAGASTNDILHQYVSTIKALRTIDPTGVFLEAVGEPIRDYLRGRKDT 465
+ S AL+ RLL G +T DI+ Y+S IKALR +DP+ V LE EPIR YLR R+DT
Sbjct: 390 LVSLKVALETRLLHPGVNTCDIITLYISAIKALRVLDPSMVILEVACEPIRRYLRTREDT 449
Query: 466 IKCIVTMLTDGTGGNPNGSGNAGDSLLEELNRDEENQENIGVDDGFNIDDKQAWINAVCW 525
++ IV LT G+ +G+G+ L EL++ + G D + + + W+
Sbjct: 450 VRQIVAGLT----GDSDGTGD----LAVELSKTDPACLETGQDSEDDSGEPEDWV----- 496
Query: 526 EPDPVEADPLKGSRNRRKVDILGMIVGIIGSKDQLVNEYRVMLADKLLNKSDYEIDSEIR 585
PDPV+ADP+K S RR DI+ ++V I GSKD +NEYR +LAD+LL++ + + EIR
Sbjct: 497 -PDPVDADPVKSSSKRRSSDIISLLVSIYGSKDLFINEYRSLLADRLLHQFSFSPEREIR 555
Query: 586 TLELLKIHFGESSMQRCEIMLNDLIDSKRTNANIKATIEKQSLAGSELGEEGVSLGLLDA 645
+ELLK+ FGE+ M CE+ML D+ DS+R NANI+ EK+ + EE G+ A
Sbjct: 556 NVELLKLRFGEAPMHFCEVMLKDMADSRRINANIREEDEKRPV------EEQPPFGVY-A 608
Query: 646 TIISSNFWPPMQDEALIVPGHIDQLLADYAKRFNEIKTPRKLLWKKNLGTVKLELQFDDR 705
I+SS FWPP +DE L VP I L Y K++ ++K R L WK LG V ++++ DR
Sbjct: 609 VILSSEFWPPFKDEKLEVPEDIRAALDVYCKKYEKLKAMRTLSWKHTLGLVTMDVELADR 668
Query: 706 AMQFTVAPIHAAIIMQFQDQTSWTSKNLAAAVGVPVDVLSRRINFWISKGIIK-ESVGTG 764
+ V P+ A +++ FQ+Q SWT + L+ V +PV +L RR++ W+ +G+++ E GT
Sbjct: 669 TLSVAVTPVQAVVLLYFQNQASWTLEELSKVVKMPVALLRRRMSVWLQQGVLREEPPGT- 727
Query: 765 SNDHLYNLVEGMVDSSKNGDNTGSCEELLGGDEDGERSVASVEDQIRNEMTVYEPTLFLV 824
++++E + ++ DN L+ D++ + +AS DQ E+ L
Sbjct: 728 -----FSVIEE--ERPQDRDNMV----LIDSDDESDSGMASQADQKEEEL------LLFW 770
Query: 825 RYVANILTQKSLLS 838
Y+ +LT LS
Sbjct: 771 AYIQAMLTNLESLS 784
>sp|Q551S9|APC2_DICDI Anaphase-promoting complex subunit 2 OS=Dictyostelium discoideum
GN=anapc2 PE=3 SV=1
Length = 907
Score = 264 bits (674), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 165/536 (30%), Positives = 275/536 (51%), Gaps = 46/536 (8%)
Query: 258 LRTLGFTSMTENAYASAIFSLLKAKVHNLAGEDYRSSVLEPIKAWIQAVPLQFLNALL-- 315
L+ L F ++E + +F + + + S L+ I W V ++L +L
Sbjct: 259 LQDLNFIVISEEIFTQILFKKVFEYIETRCKGVFEKSFLKSILEWADQVIFKWLAMILLS 318
Query: 316 AYLGESESYDSPTAGLKSPLASRPLCCPGTHNPSEGLVRWRLRLEYFAYETLQDLRIAKL 375
+ + + N + +W+ RLE+ YE RI++L
Sbjct: 319 STTTTKINNYNDIINNNDDDNDDDDDDENKENSLKIFNQWKKRLEFSIYENYSQQRISEL 378
Query: 376 FEIIVDYPESSPAIEDLKQCLEYTGQHSKLVESFISALKYRLLTAGASTNDILHQYVSTI 435
F++IV YP+S P++EDL C + ++ + L RLL GA+T+DI+ QY+STI
Sbjct: 379 FDMIVQYPDSLPSLEDLSICFQKIPIEKTMITNLKRVLHNRLLHPGANTSDIITQYISTI 438
Query: 436 KALRTIDPTGVFLEAVGEPIRDYLRGRKDTIKCIVTMLTDGTGG------NPNGSGNAGD 489
A+ IDP+G+ +E VG+PIR+YL R+DTI+CI++ T+ + N + N GD
Sbjct: 439 HAMDIIDPSGMVMEKVGKPIREYLSQREDTIRCIISSFTEESNEIYQELCNYDPQDNGGD 498
Query: 490 -----SLLEELNRDEENQENIGVDDGFN---IDDKQAWINAVCWEPDPVEADPLKGS--- 538
SLL N D + VD+G N IDD + WI P+ ++ S
Sbjct: 499 DDSNNSLLAFGNCD------LYVDEGDNFSSIDDFKFWI------PNKIDGSSTTISIGN 546
Query: 539 -------RNRRKVDILGMIVGIIGSKDQLVNEYRVMLADKLLNKSDYEIDSEIRTLELLK 591
+ ++K D + +V I D +NEYR ML+D+LL+ D+++D EI+ +ELLK
Sbjct: 547 AKANNNNKKKKKKDTISHLVNIYDGIDLFINEYRSMLSDRLLSVVDFDLDKEIKNIELLK 606
Query: 592 IHFGESSMQRCEIMLNDLIDSKRTNANIKATIEKQSLAGSELGEEGVSLGLLDATIISSN 651
+ FG+S + CEIM+ D++DSKR N IK + + + + L + I+S
Sbjct: 607 LRFGDSVLFNCEIMIKDMVDSKRLNLQIKNS-QGVNNNNNNNNNNNNELKEFETLILSQL 665
Query: 652 FWPPMQDEALIVPGHIDQLLADYAKRFNEIKTPRKLLWKKNLGTVKLELQFDDRAMQFTV 711
FWP ++ + P I++ + Y+K + IKTPR+L+WK++LG V L+L+ + F V
Sbjct: 666 FWPTLKGDEFKYPKSIEKKMQIYSKEYERIKTPRQLIWKQHLGLVDLDLEIGNNIQSFQV 725
Query: 712 APIHAAIIMQFQD-------QTSWTSKNLAAAVGVPVDVLSRRINFWISKGIIKES 760
+PIHA +IM F+ + T + L+ + + D++ +++ FW++ IIKE+
Sbjct: 726 SPIHATLIMLFESDDGDDDDEKELTLEYLSKQLEISKDLVKKKLIFWLNNQIIKET 781
>sp|Q874R3|APC2_SCHPO Anaphase-promoting complex subunit 2 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=apc2 PE=1 SV=1
Length = 681
Score = 197 bits (500), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 129/405 (31%), Positives = 211/405 (52%), Gaps = 40/405 (9%)
Query: 357 LRLEYFAYETLQDLRIAKLFEIIVDYPESSPAIEDLKQCLEYTGQHSKLVESFISALKYR 416
++L++ + L LR + +I++ YP S AIEDL+ Q L E+F+
Sbjct: 208 VQLDHLVSQILAHLRSDNILDIVLHYPNSLGAIEDLRLVARQKQQRQYLTETFVKDCTSS 267
Query: 417 LLTAGASTNDILHQYVSTIKALRTIDPTGVFLEAVGEPIRDYLRGRKDTIKCIVTML-TD 475
+LTA + ++ IL YVSTI+ +DP GV L+ +PIR +L R+D KC+V++L D
Sbjct: 268 ILTASSDSSYILLFYVSTIRCFVALDPPGVLLDKAAKPIRSFLNEREDAYKCLVSLLFVD 327
Query: 476 GTGGNPNGSGNAGDSLLEELNRDEENQENIGVDDGFNIDDKQAWINAVCWEPDPVEADP- 534
G G L EL++ NID + W PDP++A P
Sbjct: 328 GEKG-----------LRSELSQIPTE----------NIDSTTDRFDNYHWMPDPIDAAPD 366
Query: 535 LKGSRNRRKVDILGMIVGIIGSKDQLVNEYRVMLADKLLNKSDYEIDSEIRTLELLKIHF 594
K +R D++G ++ I SK+ LV E +++LAD+LL +DY + E + +E LK F
Sbjct: 367 FKKPTDR---DVVGSLISIFKSKEPLVKELQLLLADRLLQLTDYHYEVEAKNIEFLKYRF 423
Query: 595 GESSMQRCEIMLNDLIDSKRTNANIKATIEKQSLAGSELGEEGVSLGLLDATIISSNFWP 654
GE+ +Q C +MLND+ +S+ + +I E VS G L TI+S FWP
Sbjct: 424 GETVLQMCSVMLNDIENSRFIDQSIHM-------------ENYVSKG-LHVTILSRLFWP 469
Query: 655 PMQDEALIVPGHIDQLLADYAKRFNEIKTPRKLLWKKNLGTVKLELQFDDRAMQFTVAPI 714
+ +PG + + L YA+ + E K R+L++ NLG+V+LE++ +DR + TV P
Sbjct: 470 TLSVRYFHLPGPLKKELDAYAEEYRERKRKRELVFLPNLGSVELEIELEDRTLTLTVTPE 529
Query: 715 HAAIIMQFQDQTSWTSKNLAAAVGVPVDVLSRRINFWISKGIIKE 759
AA I F++ ++ + A + P +++ R + FW+ ++ +
Sbjct: 530 QAAFISLFEETSTLHIEKAAELLDQPKEIVERHLKFWLHHRVLTD 574
>sp|P34514|APC2_CAEEL Anaphase-promoting complex subunit 2 OS=Caenorhabditis elegans
GN=apc-2 PE=1 SV=3
Length = 731
Score = 172 bits (436), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 109/386 (28%), Positives = 199/386 (51%), Gaps = 17/386 (4%)
Query: 378 IIVDYPESSPAIEDLKQCLEYTGQHSKL--VESFISALKYRLLTAGASTNDILHQYVSTI 435
I VD+P ++ +K CL T H ++ I + +LL A T DIL Y + +
Sbjct: 234 IAVDFPVKFRSLITMKYCLLRTNNHGRVDFTNYLIDQVNTKLLVASVDTKDILKAYAACV 293
Query: 436 KALRTIDPTGVFLEAVGEPIRDYLRGRKDTIKCIVTMLTDGTGGNPNGSGNAGDSLLEEL 495
++LR +D + V + V IR+YL+ R DT++ I++ +T + +
Sbjct: 294 ESLREMDNSCVVMHKVCGVIREYLKRRPDTVQQIISYITSNKKNELEKDMSLQSKTVRSA 353
Query: 496 NRDEENQENIGVDDGFNIDDKQA--WINAVCWEPDPVEADPLKGSRNRRKVDILGMIVGI 553
DEE E GV+D F ++ + W N W P+P +A G+ + VD+ M+V +
Sbjct: 354 MMDEE--ELKGVNDDFLPENMETLGWEN---WMPNPTDATVGDGAPGHQGVDVFNMLVSV 408
Query: 554 IGSKDQLVNEYRVMLADKLLNKSDYEIDSEIRTLELLKIHFGESSMQRCEIMLNDLIDSK 613
GSK+ V EYR +LA++L + + + + E R L+LLK+ F S +Q CE+ML D+I S
Sbjct: 409 YGSKELFVKEYRNLLAERLSSSDNKDPEFEKRYLDLLKLRFQYSELQHCEVMLRDVIHSL 468
Query: 614 RTNANIKATIEKQSLAGSELGEEGVSLGLLDATIISSNFWPPMQDEAL--IVPGHIDQLL 671
+ + E+ + G V + + A IISS++WP ++ E ++P + +
Sbjct: 469 DIDKKFEDMSERSA------GNYDVPIIPISACIISSHYWPKLETEKTEALMPQPLQAAM 522
Query: 672 ADYAKRFNEIKTPRKLLWKKNLGTVKLELQFDDRAMQFTVAPIHAAIIMQFQDQTSWTSK 731
Y + + ++K RKL W +++G V++ + D + T+ ++A ++ F ++ +WT+
Sbjct: 523 DVYQETYLDVKRDRKLEWLRSVGCVEVSINIDGVEVDRTIPNMYALLLFLFLEKETWTTA 582
Query: 732 NLAAAVGVPVDVLSRRINFWISKGII 757
+ +G+ V V +R+ + + +G I
Sbjct: 583 EVVEKMGMSVVVTRKRLEWLVKQGFI 608
>sp|Q12440|APC2_YEAST Anaphase-promoting complex subunit 2 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=APC2 PE=1 SV=1
Length = 853
Score = 100 bits (250), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 105/459 (22%), Positives = 206/459 (44%), Gaps = 66/459 (14%)
Query: 370 LRIAKLFEI-IVDYPESSPAIEDLKQCLEYTGQHSKLVESFISALKYRLLTAGASTNDIL 428
+R ++F+I ++ YP+S + +L++ ++ ++ +V +F+S K +L +T D L
Sbjct: 282 IRTNEIFDICVLAYPDSKVTLLELRKIMKDFKDYTNIVTTFLSDFKKYILNPSVTTVDAL 341
Query: 429 HQYVSTIKALRTIDPTGVFLEAVGEPIRDYLRGRKDTIKCIVTMLTD------GTGGNPN 482
+YV TIKA +DPTG L ++ ++ Y + RK + ++ + D N N
Sbjct: 342 LRYVKTIKAFLVLDPTGRCLHSITTFVKPYFQERKHLVNVLLYAMLDLPEEELKEKINFN 401
Query: 483 GSGNAGDSLLEELNRDEENQE-NIGVDDGFNIDDKQAW---------INA---------- 522
A SL++ L+ + NQ+ NI D N W +N
Sbjct: 402 VDMKALLSLVDTLHDSDINQDTNITKRDK-NKKSPFLWNLKVKGKRELNKDLPIRHAMLY 460
Query: 523 -------VCWEPDPVEADPLKGSRNRRKVDILGMIVGIIGSKDQLVNEYRVMLADKLLNK 575
+ W P+P + P + K ++ +++ + S++ ++E+R +L D+L
Sbjct: 461 EHILNYYIAWVPEPNDMIPGNIKSSYIKTNLFEVLLDLFESREFFISEFRNLLTDRLFTL 520
Query: 576 SDYEIDSE-IRTLELLK---IHFGESSMQRCEIMLNDLI----------DSKRTNANIKA 621
Y +D + R L+L++ + F E+S + N ++ D+ ++N N
Sbjct: 521 KFYTLDEKWTRCLKLIREKIVKFTETS--HSNYITNGILGLLETTAPAADADQSNLNSID 578
Query: 622 TIEKQSLAGSELGEEGVSLGLLDATI----ISSNFWPP------MQDEALIVPGHIDQLL 671
+ EL + + LD I IS +W D A +P +++ L
Sbjct: 579 VMLWDIKCSEELCRKMHEVAGLDPIIFPKFISLLYWKYNCDTQGSNDLAFHLPIDLEREL 638
Query: 672 ADYAKRFNEIKTPRKLLWKKNLGTVKLELQFDD-RAMQFTVAPIHAAIIMQF----QDQT 726
Y+ ++++K RKL K+ G V+++L F D R + V+ ++I QF +
Sbjct: 639 QKYSDIYSQLKPGRKLQLCKDKGKVEIQLAFKDGRKLVLDVSLEQCSVINQFDSPNDEPI 698
Query: 727 SWTSKNLAAAVGVPVDVLSRRINFWISKGIIKESVGTGS 765
+ + L+ ++ + L+ ++FWI KG++ + GT S
Sbjct: 699 CLSLEQLSESLNIAPPRLTHLLDFWIQKGVLLKENGTYS 737
>sp|Q09760|CUL3_SCHPO Cullin-3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=cul3 PE=1 SV=2
Length = 785
Score = 65.1 bits (157), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 80/179 (44%), Gaps = 20/179 (11%)
Query: 553 IIGSKDQLVNEYRVMLADKLLNKSDYEIDSEIRTLELLKIHFGESSMQRCEIMLNDLIDS 612
I KD Y+ LA +LLN D+E+ + LK G Q+ E M ND+
Sbjct: 458 FISEKDVFEKYYKTHLAKRLLNNRSISSDAELGMISRLKQEAGNVFTQKLEGMFNDM--- 514
Query: 613 KRTNANIKATIEKQSLAGSELGEEGVSLGLLDATIISSNFWP----PMQDEA---LIVPG 665
N+ + ++ S L +L L + +I++S FWP P + + ++
Sbjct: 515 -----NLSQELLQEYKHNSALQSAKPALDL-NVSILASTFWPIDLSPHKIKCNFPKVLLA 568
Query: 666 HIDQLLADYAKRFNEIKTPRKLLWKKNLGTVKLELQFDDRAMQFTVAPIHAAIIMQFQD 724
IDQ Y + T RKLLW ++G+ + + F DR V+ I + I++ FQD
Sbjct: 569 QIDQFTDFYLSK----HTGRKLLWYPSMGSADVRVNFKDRKYDLNVSTIASVILLLFQD 623
>sp|Q54NZ5|CUL3_DICDI Cullin-3 OS=Dictyostelium discoideum GN=culC PE=3 SV=1
Length = 769
Score = 64.3 bits (155), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 88/207 (42%), Gaps = 13/207 (6%)
Query: 544 VDILGMIVGIIGSKDQLVNEYRVMLADKLLNKSDYEIDSEIRTLELLKIHFGESSMQRCE 603
+D + M+ +I KD Y+ LA +LL D+E + LK G + E
Sbjct: 407 LDKILMLFRLIQEKDVFEKYYKQHLAKRLLLGRSISDDAERNMIAKLKTECGYQFTSKLE 466
Query: 604 IMLNDLIDSKRTNANIKATIE--KQSLAGSELGEEGVSLGLLDATIISSNFWPPMQDEAL 661
M D+ S+ T + K I+ K++L L+ ++++ FWP
Sbjct: 467 GMFTDMRLSQDTMSGFKTYIQNLKKALPID-----------LNVHVLTTGFWPTQNTANC 515
Query: 662 IVPGHIDQLLADYAKRFNEIKTPRKLLWKKNLGTVKLELQFDDRAMQFTVAPIHAAIIMQ 721
+P I + + R LLW+ N+GT +++ F ++ + V+ I++
Sbjct: 516 NLPREILLCCEAFKSYYLSNHNGRLLLWQTNMGTAEIKANFPSKSHELQVSSYQMVILLL 575
Query: 722 FQDQTSWTSKNLAAAVGVPVDVLSRRI 748
F DQ+ T K +A G+P L R +
Sbjct: 576 FNDQSKLTFKEIADQTGIPTIDLKRNL 602
>sp|Q94AH6|CUL1_ARATH Cullin-1 OS=Arabidopsis thaliana GN=CUL1 PE=1 SV=1
Length = 738
Score = 60.1 bits (144), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 84/183 (45%), Gaps = 12/183 (6%)
Query: 550 IVGIIGSKDQLVNEYRVMLADKLLNKSDYEIDSEIRTLELLKIHFGESSMQRCEIMLNDL 609
++ I KD YR LA +LL D E L LK G + E M+ DL
Sbjct: 419 LLAYISDKDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDL 478
Query: 610 IDSKRTNANIKATIEKQSLAGSELGEEGVSLGLLDATIISSNFWPPMQDEALIVPGHIDQ 669
++ + + L + G+ L + T++++ FWP + + +P + +
Sbjct: 479 TLARENQNSFE-----DYLGSNPAANPGIDLTV---TVLTTGFWPSYKSFDINLPSEMIK 530
Query: 670 LLADYAKRFNEIKTP-RKLLWKKNLGTVKLELQFDDRAMQFTVAPIHAAIIMQFQ--DQT 726
+ + K F E KT RKL W +LGT + +FD +A++ V+ AA+++ F D+
Sbjct: 531 CVEVF-KGFYETKTKHRKLTWIYSLGTCHINGKFDQKAIELIVSTYQAAVLLLFNTTDKL 589
Query: 727 SWT 729
S+T
Sbjct: 590 SYT 592
>sp|Q3TCH7|CUL4A_MOUSE Cullin-4A OS=Mus musculus GN=Cul4a PE=1 SV=1
Length = 759
Score = 54.3 bits (129), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 87/210 (41%), Gaps = 13/210 (6%)
Query: 542 RKVDILGMIVGIIGSKDQLVNEYRVMLADKLLNKSDYEIDSEIRTLELLKIHFGESSMQR 601
R +D + ++ I KD Y+ LA +LL +D+E L LK G + +
Sbjct: 431 RILDKIMILFRFIHGKDVFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSK 490
Query: 602 CEIMLNDLIDSKRTNANIKATIEKQSLAGSELGEEGVSLGLLDAT--IISSNFWPPMQDE 659
E M D+ SK + K ++ QS G +D T I++ +WP
Sbjct: 491 LEGMFKDMELSKDIMVHFKQHMQNQSAPGP-----------IDLTVNILTMGYWPTYTPM 539
Query: 660 ALIVPGHIDQLLADYAKRFNEIKTPRKLLWKKNLGTVKLELQFDDRAMQFTVAPIHAAII 719
+ +P + +L + + + RKL W+ LG L+ F + +F V+ ++
Sbjct: 540 EVHLPPEMVRLQEVFKTFYLGKHSGRKLQWQTTLGHAVLKADFKEGKKEFQVSLFQTLVL 599
Query: 720 MQFQDQTSWTSKNLAAAVGVPVDVLSRRIN 749
+ F + ++ + + A G+ L R +
Sbjct: 600 LMFNEGDGFSFEEIKMATGIEDSELRRTLQ 629
>sp|Q13619|CUL4A_HUMAN Cullin-4A OS=Homo sapiens GN=CUL4A PE=1 SV=3
Length = 759
Score = 53.5 bits (127), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 92/214 (42%), Gaps = 21/214 (9%)
Query: 542 RKVDILGMIVGIIGSKDQLVNEYRVMLADKLLNKSDYEIDSEIRTLELLKIHFGESSMQR 601
R +D + ++ I KD Y+ LA +LL +D+E L LK G + +
Sbjct: 431 RTLDKIMILFRFIHGKDVFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSK 490
Query: 602 CEIMLNDLIDSKRTNANIKATIEKQSLAGSELGEEGVSLGLLDAT--IISSNFWP---PM 656
E M D+ SK + K ++ QS +G +D T I++ +WP PM
Sbjct: 491 LEGMFKDMELSKDIMVHFKQHMQNQSDSGP-----------IDLTVNILTMGYWPTYTPM 539
Query: 657 QDEALIVPGHIDQLLADYAKRFNEIK-TPRKLLWKKNLGTVKLELQFDDRAMQFTVAPIH 715
E + P I L + K F K + RKL W+ LG L+ +F + +F V+
Sbjct: 540 --EVHLTPEMIK--LQEVFKAFYLGKHSGRKLQWQTTLGHAVLKAEFKEGKKEFQVSLFQ 595
Query: 716 AAIIMQFQDQTSWTSKNLAAAVGVPVDVLSRRIN 749
+++ F + ++ + + A G+ L R +
Sbjct: 596 TLVLLMFNEGDGFSFEEIKMATGIEDSELRRTLQ 629
>sp|Q17389|CUL1_CAEEL Cullin-1 OS=Caenorhabditis elegans GN=cul-1 PE=1 SV=1
Length = 780
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 89/213 (41%), Gaps = 17/213 (7%)
Query: 527 PDPVEADPLKGSRNRRKVDILGMIVGIIGSKDQLVNEYRVMLADKLLNKSDYEIDSEIRT 586
PD E + L+ + ++ I KD Y M + +L+++ ++E
Sbjct: 441 PDEAELEELQTK--------IMVVFKYIDDKDVFSKFYTKMFSKRLISELSASDEAEANF 492
Query: 587 LELLKIHFGESSMQRCEIMLNDLIDSKRTNANIKATIEKQSLAGSELGEEGVSLGLLDAT 646
+ LK G R M+ND SK A+ K EK++ LG++ V +L
Sbjct: 493 ITKLKSMCGYEYTARLSKMVNDTQVSKDLTADFK---EKKA---DMLGQKSVEFNVL--- 543
Query: 647 IISSNFWPPMQDEALIVPGHIDQLLADYAKRFNEIKTPRKLLWKKNLGTVKLELQFDDRA 706
++SS WP + +P + + + + + +NE R+L W + ++ +
Sbjct: 544 VLSSGSWPTFPTTPITLPQQLSKTIEIFGQFYNEKFNGRRLTWVYSQSRGEITSTAFPKK 603
Query: 707 MQFTVAPIHAAIIMQFQDQTSWTSKNLAAAVGV 739
FT ++ F +Q S+T + +AAA +
Sbjct: 604 YVFTATTAQMCTMLLFNEQDSYTVEQIAAATKM 636
>sp|Q9XZJ3|CUL2_DICDI Cullin-2 OS=Dictyostelium discoideum GN=culB PE=2 SV=1
Length = 771
Score = 51.2 bits (121), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 99/231 (42%), Gaps = 19/231 (8%)
Query: 536 KGSRNRRKVDI---LGMIVGI---IGSKDQLVNEYRVMLADKLLNKSDYEIDSEIRTLEL 589
KG++ ++++ LG I+ + + KD Y ML+ +L+N + D E +
Sbjct: 395 KGNKQHEEIELEEKLGQIIVLFKYVDDKDVFQKFYSKMLSRRLINGTSVSDDIEKFMITG 454
Query: 590 LKIHFGESSMQRCEIMLNDLIDSKRTNANIKATIEKQSLAGSELGEEGVSLGLLDATI-- 647
LK G + + M ND+ S TN K + K SL S+G +D +I
Sbjct: 455 LKQACGFEYTSKFQRMFNDITLSAETNEEFKNHLIKNSL----------SIGKIDFSILV 504
Query: 648 ISSNFWP-PMQDEALIVPGHIDQLLADYAKRFNEIKTPRKLLWKKNLGTVKLELQFDDRA 706
++S W Q + IVP + ++ + + ++ RKL W +L + + F ++
Sbjct: 505 LTSGSWSLHSQTSSFIVPQELTLCISAFQQYYSTQHQGRKLNWLHHLCKAEAKSFFAKKS 564
Query: 707 MQFTVAPIHAAIIMQFQDQTSWTSKNLAAAVGVPVDVLSRRINFWISKGII 757
F V I++ F Q S + + + + + LSR + I I+
Sbjct: 565 YDFQVTNFQLGILLIFNTQESVSLEEITKFTNLNENELSRTLQSLIEAKIL 615
>sp|Q5R4G6|CUL1_PONAB Cullin-1 OS=Pongo abelii GN=CUL1 PE=2 SV=1
Length = 776
Score = 50.1 bits (118), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/209 (20%), Positives = 85/209 (40%), Gaps = 10/209 (4%)
Query: 549 MIVGIIGSKDQLVNEYRVMLADKLLNKSDYEIDSEIRTLELLKIHFGESSMQRCEIMLND 608
++ I KD Y MLA +L++++ D+E + LK G + + M D
Sbjct: 451 VVFKYIEDKDVFQKFYAKMLAKRLVHQNSASDDAEASMISKLKQACGFEYTSKLQRMFQD 510
Query: 609 LIDSKRTNANIKATIEKQSLAGSELGEEGVSLGLLDATIISSNFWPPMQDEALIVPGHID 668
+ SK N K + L SE + S+ ++SS WP Q +P ++
Sbjct: 511 IGVSKDLNEQFK-----KHLTNSEPLDLDFSI-----QVLSSGSWPFQQSCTFALPSELE 560
Query: 669 QLLADYAKRFNEIKTPRKLLWKKNLGTVKLELQFDDRAMQFTVAPIHAAIIMQFQDQTSW 728
+ + + + RKL W L +L + AI++Q+ + ++
Sbjct: 561 RSYQRFTAFYASRHSGRKLTWLYQLSKGELVTNCFKNRYTLQASTFQMAILLQYNTEDAY 620
Query: 729 TSKNLAAAVGVPVDVLSRRINFWISKGII 757
T + L + + +D+L++ + + ++
Sbjct: 621 TVQQLTDSTQIKMDILAQVLQILLKSKLL 649
>sp|Q13616|CUL1_HUMAN Cullin-1 OS=Homo sapiens GN=CUL1 PE=1 SV=2
Length = 776
Score = 50.1 bits (118), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/209 (20%), Positives = 85/209 (40%), Gaps = 10/209 (4%)
Query: 549 MIVGIIGSKDQLVNEYRVMLADKLLNKSDYEIDSEIRTLELLKIHFGESSMQRCEIMLND 608
++ I KD Y MLA +L++++ D+E + LK G + + M D
Sbjct: 451 VVFKYIEDKDVFQKFYAKMLAKRLVHQNSASDDAEASMISKLKQACGFEYTSKLQRMFQD 510
Query: 609 LIDSKRTNANIKATIEKQSLAGSELGEEGVSLGLLDATIISSNFWPPMQDEALIVPGHID 668
+ SK N K + L SE + S+ ++SS WP Q +P ++
Sbjct: 511 IGVSKDLNEQFK-----KHLTNSEPLDLDFSI-----QVLSSGSWPFQQSCTFALPSELE 560
Query: 669 QLLADYAKRFNEIKTPRKLLWKKNLGTVKLELQFDDRAMQFTVAPIHAAIIMQFQDQTSW 728
+ + + + RKL W L +L + AI++Q+ + ++
Sbjct: 561 RSYQRFTAFYASRHSGRKLTWLYQLSKGELVTNCFKNRYTLQASTFQMAILLQYNTEDAY 620
Query: 729 TSKNLAAAVGVPVDVLSRRINFWISKGII 757
T + L + + +D+L++ + + ++
Sbjct: 621 TVQQLTDSTQIKMDILAQVLQILLKSKLL 649
>sp|Q9WTX6|CUL1_MOUSE Cullin-1 OS=Mus musculus GN=Cul1 PE=1 SV=1
Length = 776
Score = 50.1 bits (118), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/209 (20%), Positives = 85/209 (40%), Gaps = 10/209 (4%)
Query: 549 MIVGIIGSKDQLVNEYRVMLADKLLNKSDYEIDSEIRTLELLKIHFGESSMQRCEIMLND 608
++ I KD Y MLA +L++++ D+E + LK G + + M D
Sbjct: 451 VVFKYIEDKDVFQKFYAKMLAKRLVHQNSASDDAEASMISKLKQACGFEYTSKLQRMFQD 510
Query: 609 LIDSKRTNANIKATIEKQSLAGSELGEEGVSLGLLDATIISSNFWPPMQDEALIVPGHID 668
+ SK N K + L SE + S+ ++SS WP Q +P ++
Sbjct: 511 IGVSKDLNEQFK-----KHLTNSEPLDLDFSI-----QVLSSGSWPFQQSCTFALPSELE 560
Query: 669 QLLADYAKRFNEIKTPRKLLWKKNLGTVKLELQFDDRAMQFTVAPIHAAIIMQFQDQTSW 728
+ + + + RKL W L +L + AI++Q+ + ++
Sbjct: 561 RSYQRFTAFYASRHSGRKLTWLYQLSKGELVTNCFKNRYTLQASTFQMAILLQYNTEDAY 620
Query: 729 TSKNLAAAVGVPVDVLSRRINFWISKGII 757
T + L + + +D+L++ + + ++
Sbjct: 621 TVQQLTDSTQIKMDILAQVLQILLKSKLL 649
>sp|Q9SRZ0|CUL2_ARATH Cullin-2 OS=Arabidopsis thaliana GN=CUL2 PE=1 SV=1
Length = 742
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 75/175 (42%), Gaps = 16/175 (9%)
Query: 554 IGSKDQLVNEYRVMLADKLL---NKSDYEIDSEIRTLELLKIHFGESSMQRCEIMLNDLI 610
I KD +R A +LL N +DY E L K G + E ML D+
Sbjct: 427 ISDKDLFAEFFRKKQARRLLFDRNGNDYH---ERSLLTKFKELLGAQFTSKMEGMLTDMT 483
Query: 611 DSKRTNANIKATIEKQSLAGSELGEEGVSLGL-LDATIISSNFWPPMQDEALIVPGHIDQ 669
+K N +E S+ ++ LG+ T++++ FWP + L +P +
Sbjct: 484 LAKEHQTNF---VEFLSVNKTK------KLGMDFTVTVLTTGFWPSYKTTDLNLPIEMVN 534
Query: 670 LLADYAKRFNEIKTPRKLLWKKNLGTVKLELQFDDRAMQFTVAPIHAAIIMQFQD 724
+ + + R+L W +LGT +L +FD + ++ V AA+++ F +
Sbjct: 535 CVEAFKAYYGTKTNSRRLSWIYSLGTCQLAGKFDKKTIEIVVTTYQAAVLLLFNN 589
>sp|Q8LGH4|CUL4_ARATH Cullin-4 OS=Arabidopsis thaliana GN=CUL4 PE=1 SV=1
Length = 792
Score = 49.3 bits (116), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 87/202 (43%), Gaps = 10/202 (4%)
Query: 549 MIVGIIGSKDQLVNEYRVMLADKLLNKSDYEIDSEIRTLELLKIHFGESSMQRCEIMLND 608
++ I KD Y+ LA +LL ID+E + LK G + E M D
Sbjct: 470 VLFRFIQGKDVFEAFYKKDLAKRLLLGKSASIDAEKSMISKLKTECGSQFTNKLEGMFKD 529
Query: 609 LIDSKRTNANIKATIEKQSLAGSELGEEGVSLGLLDATIISSNFWPPMQDEALIVPGHID 668
+ SK N + K + + ++ S G+ + + ++++ +WP + +P ++
Sbjct: 530 IELSKEINESFKQSSQARTKLPS-----GIEMSV---HVLTTGYWPTYPPMDVKLPHELN 581
Query: 669 QLLADYAKRFNEIK-TPRKLLWKKNLGTVKLELQFDDRAMQFTVAPIHAAIIMQFQDQTS 727
+ D K F K + R+L+W+ +LG L+ F + V+ A ++M F D
Sbjct: 582 -VYQDIFKEFYLSKYSGRRLMWQNSLGHCVLKADFSKGKKELAVSLFQAVVLMLFNDAMK 640
Query: 728 WTSKNLAAAVGVPVDVLSRRIN 749
+ +++ + + L R +
Sbjct: 641 LSFEDIKDSTSIEDKELRRTLQ 662
>sp|Q13620|CUL4B_HUMAN Cullin-4B OS=Homo sapiens GN=CUL4B PE=1 SV=4
Length = 913
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/207 (21%), Positives = 86/207 (41%), Gaps = 9/207 (4%)
Query: 542 RKVDILGMIVGIIGSKDQLVNEYRVMLADKLLNKSDYEIDSEIRTLELLKIHFGESSMQR 601
+ +D + +I I KD Y+ LA +LL +D+E L LK G + +
Sbjct: 585 KMLDKIMIIFRFIYGKDVFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSK 644
Query: 602 CEIMLNDLIDSKRTNANIKATIEKQSLAGSELGEEGVSLGLLDATIISSNFWPPMQDEAL 661
E M D+ SK K ++ Q++ G+ L I++ +WP +
Sbjct: 645 LEGMFKDMELSKDIMIQFKQYMQNQNVPGN---------IELTVNILTMGYWPTYVPMEV 695
Query: 662 IVPGHIDQLLADYAKRFNEIKTPRKLLWKKNLGTVKLELQFDDRAMQFTVAPIHAAIIMQ 721
+P + +L + + + RKL W+ LG L+ +F + + V+ +++
Sbjct: 696 HLPPEMVKLQEIFKTFYLGKHSGRKLQWQSTLGHCVLKAEFKEGKKELQVSLFQTLVLLM 755
Query: 722 FQDQTSWTSKNLAAAVGVPVDVLSRRI 748
F + ++ + + A G+ L R +
Sbjct: 756 FNEGEEFSLEEIKQATGIEDGELRRTL 782
>sp|A2A432|CUL4B_MOUSE Cullin-4B OS=Mus musculus GN=Cul4b PE=1 SV=1
Length = 970
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/206 (21%), Positives = 85/206 (41%), Gaps = 9/206 (4%)
Query: 544 VDILGMIVGIIGSKDQLVNEYRVMLADKLLNKSDYEIDSEIRTLELLKIHFGESSMQRCE 603
+D + +I I KD Y+ LA +LL +D+E L LK G + + E
Sbjct: 644 LDKIMIIFRFIYGKDVFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLE 703
Query: 604 IMLNDLIDSKRTNANIKATIEKQSLAGSELGEEGVSLGLLDATIISSNFWPPMQDEALIV 663
M D+ SK K ++ Q++ G+ L I++ +WP + +
Sbjct: 704 GMFKDMELSKDIMIQFKQYMQNQNVPGN---------IELTVNILTMGYWPTYVPMEVHL 754
Query: 664 PGHIDQLLADYAKRFNEIKTPRKLLWKKNLGTVKLELQFDDRAMQFTVAPIHAAIIMQFQ 723
P + +L + + + RKL W+ LG L+ +F + + V+ +++ F
Sbjct: 755 PPEMVKLQEIFKTFYLGKHSGRKLQWQSTLGHCVLKAEFKEGKKELQVSLFQTMVLLMFN 814
Query: 724 DQTSWTSKNLAAAVGVPVDVLSRRIN 749
+ ++ + + A G+ L R +
Sbjct: 815 EGEEFSLEEIKHATGIEDGELRRTLQ 840
>sp|Q24311|CUL1_DROME Cullin homolog 1 OS=Drosophila melanogaster GN=lin19 PE=1 SV=2
Length = 774
Score = 47.4 bits (111), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 84/188 (44%), Gaps = 12/188 (6%)
Query: 549 MIVGIIGSKDQLVNEYRVMLADKLLNKSDYEIDSEIRTLELLKIHFGESSMQRCEIMLND 608
++ I KD Y MLA +L+N + D+E + LK G + + M D
Sbjct: 450 VVFKYIEDKDVFQKYYSKMLAKRLVNHTSASDDAEAMMISKLKQTCGYEYTVKLQRMFQD 509
Query: 609 LIDSKRTNANIKATIEKQSLAGSELGEEGVSLGLLDATIISSNFWPPMQDEALIVPGHID 668
+ SK N+ KQ LA L E + G+ ++SS WP ++P ++
Sbjct: 510 IGVSKDLNSYF-----KQYLAEKNLTME-IDFGI---EVLSSGSWPFQLSNNFLLPSELE 560
Query: 669 QLLADYAKRFNEIKTPRKLLWKKNLGTVKLELQFD-DRAMQFTV--APIHAAIIMQFQDQ 725
+ + + + + + RKL W + +L + + + + +T+ + ++++QF DQ
Sbjct: 561 RSVRQFNEFYAARHSGRKLNWLYQMCKGELIMNVNRNNSSTYTLQASTFQMSVLLQFNDQ 620
Query: 726 TSWTSKNL 733
S+T + L
Sbjct: 621 LSFTVQQL 628
>sp|Q9ZVH4|CUL3A_ARATH Cullin-3A OS=Arabidopsis thaliana GN=CUL3A PE=1 SV=1
Length = 732
Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/204 (21%), Positives = 81/204 (39%), Gaps = 12/204 (5%)
Query: 544 VDILGMIVGIIGSKDQLVNEYRVMLADKLLNKSDYEIDSEIRTLELLKIHFGESSMQRCE 603
+D + M+ + KD Y+ LA +LL+ D+E + LK G + E
Sbjct: 403 LDKVMMLFRYLQEKDVFEKYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLE 462
Query: 604 IMLNDLIDSKRTNANIKATIEKQSLAGSELGEEGVSLGLLDATIISSNFWPPMQDEALIV 663
M D+ S+ T + + S EG +L + ++++ WP +
Sbjct: 463 GMFTDMKTSEDTMRGFYGSHPELS--------EGPTLIV---QVLTTGSWPTQPAVPCNL 511
Query: 664 PGHIDQLLADYAKRFNEIKTPRKLLWKKNLGTVKLELQF-DDRAMQFTVAPIHAAIIMQF 722
P + L + + T R+L W+ N+GT ++ F + + V+ ++M F
Sbjct: 512 PAEVSVLCEKFRSYYLGTHTGRRLSWQTNMGTADIKAIFGKGQKHELNVSTFQMCVLMLF 571
Query: 723 QDQTSWTSKNLAAAVGVPVDVLSR 746
+ + K + A +P L R
Sbjct: 572 NNSDRLSYKEIEQATEIPAADLKR 595
>sp|Q9C9L0|CUL3B_ARATH Cullin-3B OS=Arabidopsis thaliana GN=CUL3B PE=1 SV=1
Length = 732
Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/205 (21%), Positives = 78/205 (38%), Gaps = 14/205 (6%)
Query: 544 VDILGMIVGIIGSKDQLVNEYRVMLADKLLNKSDYEIDSEIRTLELLKIHFGESSMQRCE 603
+D + M+ + KD Y+ LA +LL+ D+E + LK G + E
Sbjct: 403 LDKVMMLFRYLQEKDVFEKYYKQHLAKRLLSGKTVSDDAERNLIVKLKTECGYQFTSKLE 462
Query: 604 IMLNDLIDSKRTNANIKATIEKQSLAGSELGEEGVSLG-LLDATIISSNFWPPMQDEALI 662
M D+ S T L G +S G L ++++ WP
Sbjct: 463 GMFTDMKTSHDT------------LLGFYNSHPELSEGPTLVVQVLTTGSWPTQPTIQCN 510
Query: 663 VPGHIDQLLADYAKRFNEIKTPRKLLWKKNLGTVKLELQF-DDRAMQFTVAPIHAAIIMQ 721
+P + L + + T R+L W+ N+GT ++ F + + V+ ++M
Sbjct: 511 LPAEVSVLCEKFRSYYLGTHTGRRLSWQTNMGTADIKAVFGKGQKHELNVSTFQMCVLML 570
Query: 722 FQDQTSWTSKNLAAAVGVPVDVLSR 746
F + + K + A +P L R
Sbjct: 571 FNNSDRLSYKEIEQATEIPTPDLKR 595
>sp|P53202|CUL3_YEAST Cullin-3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=CUL3 PE=1 SV=1
Length = 744
Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/199 (21%), Positives = 86/199 (43%), Gaps = 20/199 (10%)
Query: 550 IVGIIGSKDQLVNEYRVMLADKLLNKSDYEIDSEIRTLELLKIHFGESSMQRCEIMLNDL 609
++G++ KD Y+ L+ +LL + ++ E ++++K G + EIML D+
Sbjct: 419 LIGLLTEKDIFEKIYKKQLSRRLLQQRSL-VEIEKWMVQMIKKVLGTFFTSKLEIMLRDI 477
Query: 610 -IDSKRTNANIKATIEKQSLAGSELGEEGVSLGLLDATIISSNFWP-----PMQDEALIV 663
+ S+ A +TI E +S +++ WP P+ DE + +
Sbjct: 478 SLSSEMYQAFQHSTIN---------SIEYLSFA---PQVLTRTSWPFQSTNPI-DEGISL 524
Query: 664 PGHIDQLLADYAKRFNEIKTPRKLLWKKNLGTVKLELQFDDRAMQFTVAPIHAAIIMQFQ 723
P + Q+LA + ++ R L W +L +++ QF+ + + + I + F+
Sbjct: 525 PPRMSQILAGFEGYYSLKYKERVLKWAHHLSVIEIGCQFNSGYYEISFSVYAGVIFLLFE 584
Query: 724 DQTSWTSKNLAAAVGVPVD 742
D T + +P+D
Sbjct: 585 DYEELTLGEIYELTHIPID 603
>sp|O14122|CUL4_SCHPO Cullin-4 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=cul4 PE=1 SV=1
Length = 734
Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/171 (21%), Positives = 74/171 (43%), Gaps = 11/171 (6%)
Query: 554 IGSKDQLVNEYRVMLADKLLNKSDYEIDSEIRTLELLKIHFGESSMQRCEIMLNDLIDSK 613
I SKD Y++ +A +LL +E+ L++LK G E M D+ SK
Sbjct: 417 IASKDIFEAYYKLDIAKRLLLNKSASAQNELMLLDMLKKTCGSQFTHSLEGMFRDVNISK 476
Query: 614 RTNANIKATIEKQSLAGSELGEEGVSLGLLDATIISSNFWPPMQDEALIVPGHIDQLLAD 673
++ + S A L + L ++S +WP + + +P + Q L
Sbjct: 477 EFTSSFR-----HSKAAHNLHRD------LYVNVLSQAYWPSYPESHIRLPDDMQQDLDC 525
Query: 674 YAKRFNEIKTPRKLLWKKNLGTVKLELQFDDRAMQFTVAPIHAAIIMQFQD 724
+ K + + +K+ W +LG ++ +F + +++ A +++QF +
Sbjct: 526 FEKFYLSKQVGKKISWYASLGHCIVKARFPLGNKELSISLFQACVLLQFNN 576
>sp|P0CH31|CLL1_ARATH Putative cullin-like protein 1 OS=Arabidopsis thaliana GN=At1g43140
PE=3 SV=1
Length = 721
Score = 42.7 bits (99), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 18/80 (22%), Positives = 40/80 (50%)
Query: 645 ATIISSNFWPPMQDEALIVPGHIDQLLADYAKRFNEIKTPRKLLWKKNLGTVKLELQFDD 704
T++++ FWP + L +P + + + + R+L W +LGT + +F+
Sbjct: 489 VTVLTTGFWPSYKTTDLNLPTEMVNCVEAFKVFYGTKTNSRRLSWIYSLGTCHILGKFEK 548
Query: 705 RAMQFTVAPIHAAIIMQFQD 724
+ M+ V+ AA+++ F +
Sbjct: 549 KTMELVVSTYQAAVLLLFNN 568
>sp|O13790|CUL1_SCHPO Cullin-1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=cul1 PE=1 SV=1
Length = 767
Score = 42.4 bits (98), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 48/225 (21%), Positives = 91/225 (40%), Gaps = 19/225 (8%)
Query: 549 MIVGIIGSKDQLVNEYRVMLADKLLNKSDYEIDSEIRTLELLKIHFGESSMQRCEIMLND 608
+I + KD N Y +LA +L+N + D+E L LK G + + M D
Sbjct: 446 IIFRYVEDKDVFQNFYTKLLAKRLVNGTSNSQDAESSMLSKLKEVCGFEYTSKLQRMFQD 505
Query: 609 LIDSKRTNANIKATIEKQSLAGSELGEEGVSLGLLDATIISSNFWPPMQDEA-LIVPGHI 667
+ S+ + T L S G S A ++ ++FWP + +P +
Sbjct: 506 ISLSQ------EITEAFWQLPQSRAGNIDFS-----ALVLGTSFWPLSPNNVNFHLPEEL 554
Query: 668 DQLLADYAKRFNEIKTPRKLLWKKNLGTVKLELQFDDR---AMQFTVAPIHAAIIMQFQD 724
L + + RKL W +L +++ + + + F V+ +++ +
Sbjct: 555 VPLYEGFQNYYYSCHNGRKLSWLFHLSKGEIKARINPQTNVTYVFQVSTYQMGVLLLYNH 614
Query: 725 QTSWTSKNLAAAVGVPVDVLSRRINFWISKGIIKESVGTGSNDHL 769
+ S+T + LA G+ D L+ +N ++ ++ G ND L
Sbjct: 615 RDSYTYEELAKITGLSTDFLTGILNIFLKAKVL----LLGDNDKL 655
>sp|Q17392|CUL4_CAEEL Cullin-4 OS=Caenorhabditis elegans GN=cul-4 PE=1 SV=3
Length = 840
Score = 37.4 bits (85), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 37/187 (19%), Positives = 70/187 (37%), Gaps = 11/187 (5%)
Query: 544 VDILGMIVGIIGSKDQLVNEYRVMLADKLLNKSDYEIDSEIRTLELLKIHFGESSMQRCE 603
VD ++ + KD Y+ LA +L + +D+E L LK G + + E
Sbjct: 504 VDEAIVLFRYLRGKDVFEAYYKRGLAKRLFLERSASVDAEKMVLCKLKTECGSAFTYKLE 563
Query: 604 IMLNDLIDSKRTNANIKATIEKQSLAGSELGEEGVSLGLLDATIISSNFWPPMQDEALIV 663
M D+ S+ +E + +E + A +I+ +WP + +
Sbjct: 564 GMFKDMDASENYGRLFNQYLE-------HMNKEKANFT---ARVITPEYWPTYDTYEINI 613
Query: 664 PGHIDQLLADYAKRFNEIKTPRKLLWKKNLGTVKLELQFDDRAMQFTVAPIHAAII-MQF 722
P + L DY + R + W L + + F + +A ++ +I + F
Sbjct: 614 PKEMRDTLTDYQDFYRVQHGNRNVKWHHGLASAVISASFRPGCKKELIATMYQTVILLLF 673
Query: 723 QDQTSWT 729
+WT
Sbjct: 674 NKCETWT 680
>sp|Q9D4H8|CUL2_MOUSE Cullin-2 OS=Mus musculus GN=Cul2 PE=1 SV=2
Length = 745
Score = 37.0 bits (84), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 42/208 (20%), Positives = 76/208 (36%), Gaps = 22/208 (10%)
Query: 550 IVGIIGSKDQLVNEYRVMLADKLLNKSDYEIDSEIRTLELLKIHFGESSMQRCEIMLNDL 609
+ I KD Y MLA +L++ +DSE + LK G + M D+
Sbjct: 421 VFKYIDDKDVFQKFYARMLAKRLIHGLSMSMDSEEAMINKLKQACGYEFTSKLHRMYTDM 480
Query: 610 IDSKRTNANIKATIEKQSLAGSELGEEGVSLGL-LDATIISSNFWPPMQ--DEALIVPGH 666
S N I Q + LG+ ++ + WP Q +P
Sbjct: 481 SVSADLNNKFNNFIRNQDTV--------IDLGISFQIYVLQAGAWPLTQAPSSTFAIPQE 532
Query: 667 IDQLLADYAKRFNEIKTPRKLLWKKNLGTVKLELQFDDRAMQFTVAPIHAAIIMQF---- 722
+++ + + +++ + RKL W L T ++++ + + V A+++ F
Sbjct: 533 LEKSVQMFELFYSQHFSGRKLTWLHYLCTGEVKMNYLGKPYVAMVTTYQMAVLLAFNNSE 592
Query: 723 -------QDQTSWTSKNLAAAVGVPVDV 743
QD T K L + +DV
Sbjct: 593 TVSYKELQDSTQMNEKELTKTIKSLLDV 620
>sp|Q1XDD8|CH60_PORYE 60 kDa chaperonin, chloroplastic OS=Porphyra yezoensis GN=groL PE=3
SV=2
Length = 528
Score = 36.6 bits (83), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 41/192 (21%), Positives = 84/192 (43%), Gaps = 24/192 (12%)
Query: 40 LNGGRDIAVGKEFVTHVRSLCKHGLQSLAHGHFLRSLEET-----FERTFVSKFWRHFDV 94
L+ G DI VGK + + + G+ SL G ++ E FE+ F+S ++
Sbjct: 149 LSSGNDIEVGKMIANAIEKVGREGVISLEEGKSTNTILEITEGMQFEKGFISPYF--VTD 206
Query: 95 YSKVAVLEKNKPLIYDDEVHEVLCKALEEICMEIQYQEKCLFMLVHAIESPRDCSLEGKP 154
++ VL++N +++ D+ ++ + L + +I + L ++ IE ++
Sbjct: 207 TERMEVLQENPFILFTDKKITLVQQELVPLLEQIAKTSRPLLIIAEDIEKEALATI---- 262
Query: 155 ILDSEVHLFAKYQLMVSSVLMASLPPHFPEMLYWYFKGRLEELSTIMDGELEDGNDSQDK 214
+ K + +++ V A P F + K LE++S + +G++ +
Sbjct: 263 -------VVNKLRGILNVV--AVRAPGFGD----RRKSLLEDMSILTNGQVITEDAGLSL 309
Query: 215 DDMDLDEKGKQR 226
D + LD GK R
Sbjct: 310 DTVQLDMLGKAR 321
>sp|Q5RCF3|CUL2_PONAB Cullin-2 OS=Pongo abelii GN=CUL2 PE=2 SV=1
Length = 745
Score = 35.8 bits (81), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 39/208 (18%), Positives = 79/208 (37%), Gaps = 22/208 (10%)
Query: 550 IVGIIGSKDQLVNEYRVMLADKLLNKSDYEIDSEIRTLELLKIHFGESSMQRCEIMLNDL 609
+ I KD Y MLA +L++ +DSE + LK Q C
Sbjct: 421 VFKYIDDKDVFQKFYARMLAKRLIHGLSMSMDSEEAMINKLK--------QACGYEFTSK 472
Query: 610 IDSKRTNANIKATIEKQSLAGSELGEEGVSLGL-LDATIISSNFWPPMQ--DEALIVPGH 666
+ T+ ++ A + + + + + LG+ ++ + WP Q +P
Sbjct: 473 LHRMYTDMSVSADLNNKFNNFIKNQDTVIDLGISFQIYVLQAGAWPLTQAPSSTFAIPQE 532
Query: 667 IDQLLADYAKRFNEIKTPRKLLWKKNLGTVKLELQFDDRAMQFTVAPIHAAIIMQF---- 722
+++ + + +++ + RKL W L T ++++ + + V A+++ F
Sbjct: 533 LEKSVQMFELFYSQHFSGRKLTWLHYLCTGEVKMNYLGKPYVAMVTTYQMAVLLAFNNSE 592
Query: 723 -------QDQTSWTSKNLAAAVGVPVDV 743
QD T K L + +DV
Sbjct: 593 TVSYKELQDSTQMNEKELTKTIKSLLDV 620
>sp|Q13617|CUL2_HUMAN Cullin-2 OS=Homo sapiens GN=CUL2 PE=1 SV=2
Length = 745
Score = 35.8 bits (81), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 39/208 (18%), Positives = 79/208 (37%), Gaps = 22/208 (10%)
Query: 550 IVGIIGSKDQLVNEYRVMLADKLLNKSDYEIDSEIRTLELLKIHFGESSMQRCEIMLNDL 609
+ I KD Y MLA +L++ +DSE + LK Q C
Sbjct: 421 VFKYIDDKDVFQKFYARMLAKRLIHGLSMSMDSEEAMINKLK--------QACGYEFTSK 472
Query: 610 IDSKRTNANIKATIEKQSLAGSELGEEGVSLGL-LDATIISSNFWPPMQ--DEALIVPGH 666
+ T+ ++ A + + + + + LG+ ++ + WP Q +P
Sbjct: 473 LHRMYTDMSVSADLNNKFNNFIKNQDTVIDLGISFQIYVLQAGAWPLTQAPSSTFAIPQE 532
Query: 667 IDQLLADYAKRFNEIKTPRKLLWKKNLGTVKLELQFDDRAMQFTVAPIHAAIIMQF---- 722
+++ + + +++ + RKL W L T ++++ + + V A+++ F
Sbjct: 533 LEKSVQMFELFYSQHFSGRKLTWLHYLCTGEVKMNYLGKPYVAMVTTYQMAVLLAFNNSE 592
Query: 723 -------QDQTSWTSKNLAAAVGVPVDV 743
QD T K L + +DV
Sbjct: 593 TVSYKELQDSTQMNEKELTKTIKSLLDV 620
>sp|Q17390|CUL2_CAEEL Cullin-2 OS=Caenorhabditis elegans GN=cul-2 PE=1 SV=3
Length = 850
Score = 35.4 bits (80), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 46/220 (20%), Positives = 84/220 (38%), Gaps = 19/220 (8%)
Query: 543 KVDILGMIVGIIGSKDQLVNEYRVMLADKLLNKSDYEIDSEIRTLELLKIHFGESSMQRC 602
K+D +I I KD Y MLA++L+ + +D+E + LK G +
Sbjct: 507 KLDSAIVIFRYIEDKDIFQKFYSKMLANRLIASTSISMDAEELMINKLKQACGYEFTSKL 566
Query: 603 EIMLNDLIDSKRTNANIKATIEKQSLAGSELGEEGVSLGLLDATIISSNFWP-------- 654
M D+ S+ + N I A + + V I+ + WP
Sbjct: 567 SRMFTDIGLSQELSNNFDKHI-----ADIKTVQPDVKFVPTQTMILQAGSWPLNAPQLST 621
Query: 655 -----PMQDEA-LIVPGHIDQLLADYAKRFNEIKTPRKLLWKKNLGTVKLELQFDDRAMQ 708
QD A +P + ++ ++ K + RKL W N+ + L + D+
Sbjct: 622 NSNNQTAQDVANFHLPRILQPVIQEFEKFYTGKHNGRKLTWLFNMSQGDVRLTYLDKQYV 681
Query: 709 FTVAPIHAAIIMQFQDQTSWTSKNLAAAVGVPVDVLSRRI 748
+ A ++ F+ + + K++ +GV D L + I
Sbjct: 682 AQMYVYQMAALLCFERRDAILVKDIGEEIGVSGDYLLKTI 721
>sp|P94427|GABT_BACSU Probable 4-aminobutyrate aminotransferase OS=Bacillus subtilis
(strain 168) GN=gabT PE=3 SV=1
Length = 436
Score = 35.0 bits (79), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 43/101 (42%), Gaps = 18/101 (17%)
Query: 17 LNDESVQE-IIESYNGF-----------CATTNSLLNGGRDIAVGKEFVTHVRSLCK-HG 63
++DES + +I+++N F C + G I K FV HV S CK HG
Sbjct: 187 MSDESYDDMVIQAFNDFFIASVAPETVACVVMEPVQGEGGFIIPSKRFVQHVASFCKEHG 246
Query: 64 LQSLAHGHFLRSLEETFERTFVSKFWRHFDVYSKVAVLEKN 104
+ +A ++ F RT HFDV + + K+
Sbjct: 247 IVFVAD-----EIQTGFARTGTYFAIEHFDVVPDLITVSKS 282
>sp|Q9JLV5|CUL3_MOUSE Cullin-3 OS=Mus musculus GN=Cul3 PE=1 SV=1
Length = 768
Score = 34.7 bits (78), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 49/232 (21%), Positives = 84/232 (36%), Gaps = 43/232 (18%)
Query: 544 VDILGMIVGIIGSKDQLVNEYRVMLADKLLNKSDYEIDSEIRTLELLKIHFGESSMQRCE 603
+D ++ + KD Y+ LA +LL DSE + LK G + E
Sbjct: 412 LDKAMVLFRFMQEKDVFERYYKQHLARRLLTNKSVSDDSEKNMISKLKTECGCQFTSKLE 471
Query: 604 IMLNDLIDSKRTNANIKATIEKQSLAGSELGEEGVSLGLLDAT--IISSNFWPPMQDEAL 661
M D+ S T +Q L + GVSLG +D T ++++ +WP
Sbjct: 472 GMFRDMSISNTTMDEF-----RQHLQAT-----GVSLGGVDLTVRVLTTGYWPTQSATPK 521
Query: 662 I----VPGHIDQLLADYAKRFNEIK-TPRKLLWKKNLGTVKLELQF-------------- 702
P H ++ +RF K + R+L + ++G+ L F
Sbjct: 522 CNIPPAPRHAFEIF----RRFYLAKHSGRQLTLQHHMGSADLNATFYGPVKKEDGSEVGV 577
Query: 703 --------DDRAMQFTVAPIHAAIIMQFQDQTSWTSKNLAAAVGVPVDVLSR 746
+ R V+ I+M F ++ +T + + +P L R
Sbjct: 578 GGAQVTGSNTRKHILQVSTFQMTILMLFNNREKYTFEEIQQETDIPERELVR 629
>sp|Q13618|CUL3_HUMAN Cullin-3 OS=Homo sapiens GN=CUL3 PE=1 SV=2
Length = 768
Score = 34.7 bits (78), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 49/232 (21%), Positives = 84/232 (36%), Gaps = 43/232 (18%)
Query: 544 VDILGMIVGIIGSKDQLVNEYRVMLADKLLNKSDYEIDSEIRTLELLKIHFGESSMQRCE 603
+D ++ + KD Y+ LA +LL DSE + LK G + E
Sbjct: 412 LDKAMVLFRFMQEKDVFERYYKQHLARRLLTNKSVSDDSEKNMISKLKTECGCQFTSKLE 471
Query: 604 IMLNDLIDSKRTNANIKATIEKQSLAGSELGEEGVSLGLLDAT--IISSNFWPPMQDEAL 661
M D+ S T +Q L + GVSLG +D T ++++ +WP
Sbjct: 472 GMFRDMSISNTTMDEF-----RQHLQAT-----GVSLGGVDLTVRVLTTGYWPTQSATPK 521
Query: 662 I----VPGHIDQLLADYAKRFNEIK-TPRKLLWKKNLGTVKLELQF-------------- 702
P H ++ +RF K + R+L + ++G+ L F
Sbjct: 522 CNIPPAPRHAFEIF----RRFYLAKHSGRQLTLQHHMGSADLNATFYGPVKKEDGSEVGV 577
Query: 703 --------DDRAMQFTVAPIHAAIIMQFQDQTSWTSKNLAAAVGVPVDVLSR 746
+ R V+ I+M F ++ +T + + +P L R
Sbjct: 578 GGAQVTGSNTRKHILQVSTFQMTILMLFNNREKYTFEEIQQETDIPERELVR 629
>sp|B5DF89|CUL3_RAT Cullin-3 OS=Rattus norvegicus GN=Cul3 PE=1 SV=2
Length = 768
Score = 34.7 bits (78), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 49/232 (21%), Positives = 84/232 (36%), Gaps = 43/232 (18%)
Query: 544 VDILGMIVGIIGSKDQLVNEYRVMLADKLLNKSDYEIDSEIRTLELLKIHFGESSMQRCE 603
+D ++ + KD Y+ LA +LL DSE + LK G + E
Sbjct: 412 LDKAMVLFRFMQEKDVFERYYKQHLARRLLTNKSVSDDSEKNMISKLKTECGCQFTSKLE 471
Query: 604 IMLNDLIDSKRTNANIKATIEKQSLAGSELGEEGVSLGLLDAT--IISSNFWPPMQDEAL 661
M D+ S T +Q L + GVSLG +D T ++++ +WP
Sbjct: 472 GMFRDMSISNTTMDEF-----RQHLQAT-----GVSLGGVDLTVRVLTTGYWPTQSATPK 521
Query: 662 I----VPGHIDQLLADYAKRFNEIK-TPRKLLWKKNLGTVKLELQF-------------- 702
P H ++ +RF K + R+L + ++G+ L F
Sbjct: 522 CNIPPAPRHAFEIF----RRFYLAKHSGRQLTLQHHMGSADLNATFYGPVKKEDGSEVGV 577
Query: 703 --------DDRAMQFTVAPIHAAIIMQFQDQTSWTSKNLAAAVGVPVDVLSR 746
+ R V+ I+M F ++ +T + + +P L R
Sbjct: 578 GGAQVTGSNTRKHILQVSTFQMTILMLFNNREKYTFEEIQQETDIPERELVR 629
>sp|A4IHP4|CUL3_XENTR Cullin-3 OS=Xenopus tropicalis GN=cul3 PE=2 SV=1
Length = 768
Score = 34.7 bits (78), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 48/232 (20%), Positives = 82/232 (35%), Gaps = 43/232 (18%)
Query: 544 VDILGMIVGIIGSKDQLVNEYRVMLADKLLNKSDYEIDSEIRTLELLKIHFGESSMQRCE 603
+D ++ + KD Y+ LA +LL DSE + LK G + E
Sbjct: 412 LDKAMVLFRFMQEKDVFERYYKQHLARRLLTNKSVSDDSEKNMISKLKTECGCQFTSKLE 471
Query: 604 IMLNDLIDSKRTNANIKATIEKQSLAGSELGEEGVSLGLLDAT--IISSNFWPPMQDEAL 661
M D+ S T + L GVSLG +D T ++++ +WP
Sbjct: 472 GMFRDMSISNTTMDEFR----------QHLQTTGVSLGGVDLTVRVLTTGYWPTQSATPK 521
Query: 662 I----VPGHIDQLLADYAKRFNEIK-TPRKLLWKKNLGTVKLELQF-------------- 702
P H ++ +RF K + R+L + ++G+ L F
Sbjct: 522 CNIPPAPRHAFEIF----RRFYLAKHSGRQLTLQHHMGSADLNATFYGPVKKEDGSEVGV 577
Query: 703 --------DDRAMQFTVAPIHAAIIMQFQDQTSWTSKNLAAAVGVPVDVLSR 746
+ R V+ I+M F ++ +T + + +P L R
Sbjct: 578 GGAQVTGSNTRKHILQVSTFQMTILMLFNNREKYTFEEIQQETDIPERELVR 629
>sp|P18257|ACHN3_CARAU Neuronal acetylcholine receptor subunit non-alpha-3 OS=Carassius
auratus PE=2 SV=1
Length = 466
Score = 34.7 bits (78), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 5/66 (7%)
Query: 273 SAIFSLLKAKVHNLAGEDYRSSVLEPIKAWIQAVPLQFLNALLAYLGESESYDSPTAGLK 332
S I +L VH+ + Y P+ W++++ LQ L LL G ++ Y P L+
Sbjct: 313 SIIVTLFVINVHHRSSATY-----HPMAPWVKSLFLQRLPRLLCMRGHTDRYQYPDIELR 367
Query: 333 SPLASR 338
SP R
Sbjct: 368 SPELKR 373
>sp|Q6DE95|CUL3A_XENLA Cullin-3-A OS=Xenopus laevis GN=cul3a PE=1 SV=1
Length = 768
Score = 34.7 bits (78), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 48/232 (20%), Positives = 82/232 (35%), Gaps = 43/232 (18%)
Query: 544 VDILGMIVGIIGSKDQLVNEYRVMLADKLLNKSDYEIDSEIRTLELLKIHFGESSMQRCE 603
+D ++ + KD Y+ LA +LL DSE + LK G + E
Sbjct: 412 LDKAMVLFRFMQEKDVFERYYKQHLARRLLTNKSVSDDSEKNMISKLKTECGCQFTSKLE 471
Query: 604 IMLNDLIDSKRTNANIKATIEKQSLAGSELGEEGVSLGLLDAT--IISSNFWPPMQDEAL 661
M D+ S T + L GVSLG +D T ++++ +WP
Sbjct: 472 GMFRDMSISNTTMDEFR----------QHLQTTGVSLGGVDLTVRVLTTGYWPTQSATPK 521
Query: 662 I----VPGHIDQLLADYAKRFNEIK-TPRKLLWKKNLGTVKLELQF-------------- 702
P H ++ +RF K + R+L + ++G+ L F
Sbjct: 522 CNIPPAPRHAFEIF----RRFYLAKHSGRQLTLQHHMGSADLNATFYGPVKKEDGSEVGV 577
Query: 703 --------DDRAMQFTVAPIHAAIIMQFQDQTSWTSKNLAAAVGVPVDVLSR 746
+ R V+ I+M F ++ +T + + +P L R
Sbjct: 578 GGAQVTGSNTRKHILQVSTFQMTILMLFNNRDKYTFEEIQQETDIPERELVR 629
>sp|A1SY74|GCSP_PSYIN Glycine dehydrogenase [decarboxylating] OS=Psychromonas ingrahamii
(strain 37) GN=gcvP PE=3 SV=1
Length = 966
Score = 34.3 bits (77), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 32/69 (46%), Gaps = 4/69 (5%)
Query: 356 RLRLEYFAYE----TLQDLRIAKLFEIIVDYPESSPAIEDLKQCLEYTGQHSKLVESFIS 411
R R E+F YE +++DL LF ++ YP ++ I+DL +E LV
Sbjct: 189 RTRAEFFGYEIISGSMEDLDNHDLFGALLQYPSTTGNIQDLTAIIEKAHAKKTLVSVASD 248
Query: 412 ALKYRLLTA 420
L LL A
Sbjct: 249 LLALTLLKA 257
>sp|Q5UQT0|YR337_MIMIV Uncharacterized cullin-like protein R337 OS=Acanthamoeba polyphaga
mimivirus GN=MIMI_R337 PE=3 SV=1
Length = 281
Score = 34.3 bits (77), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 35/166 (21%), Positives = 67/166 (40%), Gaps = 8/166 (4%)
Query: 609 LIDSKRTNANI-KATIEKQSLAGSELGEEGVSLGLLDATIISSNFWPPMQDEALIV--PG 665
+I ++ N +I AT+E +G+ +S +L+ II W + + V P
Sbjct: 1 MISNRNNNTSIHNATVENVEGKYKSIGD--ISTEMLNPVIIDKTVWTIFNNLNIDVQYPL 58
Query: 666 HIDQLLADYAKRFNEIKTPR-KLLWKKNLGTVKLELQFDDRAMQFTVAPIHAAIIMQFQD 724
++ L K +N I + + W +GT D+ + T + A II F D
Sbjct: 59 ELECYLNIVEKSYNIIYENKFSINWLPTMGTACFRAILGDKNVTITCNILQAIIISLFND 118
Query: 725 QTSWTSKNLAAAVGVPVDVLSRRINFWISKGIIKESVGTGSNDHLY 770
+ ++ ++ G+ D+ + + I+ SND +Y
Sbjct: 119 TNNLSASSVYNKTGIQYDLSEKILESLFEANIVTRKY--SSNDTVY 162
>sp|Q6GPF3|CUL3B_XENLA Cullin-3-B OS=Xenopus laevis GN=cul3b PE=1 SV=1
Length = 768
Score = 33.9 bits (76), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 44/228 (19%), Positives = 79/228 (34%), Gaps = 35/228 (15%)
Query: 544 VDILGMIVGIIGSKDQLVNEYRVMLADKLLNKSDYEIDSEIRTLELLKIHFGESSMQRCE 603
+D ++ + KD Y+ LA +LL DSE + LK G + E
Sbjct: 412 LDKAMVLFRFMQEKDVFERYYKQHLARRLLTNKSVSDDSEKNMISKLKTECGCQFTSKLE 471
Query: 604 IMLNDLIDSKRTNANIKATIEKQSLAGSELGEEGVSLGLLDAT--IISSNFWPPMQDEAL 661
M D+ S T + L GVSLG +D T ++++ +WP
Sbjct: 472 GMFRDMSISNTTMDEFR----------QHLQTTGVSLGGVDLTVRVLTTGYWPTQSATPK 521
Query: 662 I-VPGHIDQLLADYAKRFNEIKTPRKLLWKKNLGTVKLELQF------------------ 702
+P + + + + R+L + ++G+ L F
Sbjct: 522 CNIPPSPRHAFEIFRRFYLAKHSGRQLTLQHHMGSADLNATFYGAVKKEDGSEVGVGGAQ 581
Query: 703 ----DDRAMQFTVAPIHAAIIMQFQDQTSWTSKNLAAAVGVPVDVLSR 746
+ R V+ I+M F ++ +T + + +P L R
Sbjct: 582 VTGSNTRKHILQVSTFQMTILMLFNNREKYTFEEIQQETDIPERELVR 629
>sp|Q9QXW2|FBXW5_MOUSE F-box/WD repeat-containing protein 5 OS=Mus musculus GN=Fbxw5 PE=1
SV=1
Length = 573
Score = 33.9 bits (76), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Query: 477 TGGNPNGSGNAGDSLLEELNRDEENQENIGVDDGFNIDDKQAWINAVCWEPDPVEADPLK 536
T G G G D+ + L+ + +I + G + D++ ++N+ W P V ADP++
Sbjct: 380 TAGPVLGEGRGSDAFFDALDHVIDVHGHI-IGMGLSPDNRYLYVNSRAWPPGSVVADPMQ 438
Query: 537 GSRNRRKVDIL 547
++D+L
Sbjct: 439 PPPIAEEIDLL 449
>sp|Q4KLI9|FBXW5_RAT F-box/WD repeat-containing protein 5 OS=Rattus norvegicus GN=Fbxw5
PE=2 SV=1
Length = 569
Score = 33.5 bits (75), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Query: 477 TGGNPNGSGNAGDSLLEELNRDEENQENIGVDDGFNIDDKQAWINAVCWEPDPVEADPLK 536
T G G G D+ + L+ + +I + G + D++ ++N+ W P V ADP++
Sbjct: 380 TAGPVLGEGRGSDAFFDALDHVIDVHGHI-IGMGLSPDNRYLYVNSRAWPPGSVVADPMQ 438
Query: 537 GSRNRRKVDIL 547
++D+L
Sbjct: 439 PPPIAEEIDLL 449
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.135 0.391
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 319,771,603
Number of Sequences: 539616
Number of extensions: 14296045
Number of successful extensions: 40923
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 33
Number of HSP's that attempted gapping in prelim test: 40842
Number of HSP's gapped (non-prelim): 71
length of query: 842
length of database: 191,569,459
effective HSP length: 126
effective length of query: 716
effective length of database: 123,577,843
effective search space: 88481735588
effective search space used: 88481735588
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 66 (30.0 bits)