BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 003176
(842 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SZL8|FRS5_ARATH Protein FAR1-RELATED SEQUENCE 5 OS=Arabidopsis thaliana GN=FRS5
PE=2 SV=1
Length = 788
Score = 44.7 bits (104), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 81/415 (19%), Positives = 160/415 (38%), Gaps = 50/415 (12%)
Query: 377 PKEISKSILRDFG--VTLNYSQVYRGIEGAREQLQGSYKEAYNQLPWFCDKLLEANPGSF 434
P+ I ++++++G + +++V R Q S + L + ++ NP F
Sbjct: 210 PRRIMSALIKEYGGISKVGFTEV-DCRNYMRNNRQKSIEGEIQLLLDYLRQMNADNPNFF 268
Query: 435 IKLLIDNDKKFQRLFISFDASIHGFQNGCRPLLFLDSTSLRSKYHEILLTATALD--GDD 492
+ D+ +F + +I F + + F D+T ++Y T ++ G
Sbjct: 269 YSVQGSEDQSVGNVFWADPKAIMDFTHFGDTVTF-DTTYRSNRYRLPFAPFTGVNHHGQP 327
Query: 493 CIFPVAFAIVDTENDDSWNWFLEELRSAVSSSRSITFVSDKQKGLMESVLKIFENAHHGY 552
+F AF I +TE S+ W +A+S+ ++ +D + +++ +F A H +
Sbjct: 328 ILFGCAFIINETEA--SFVWLFNTWLAAMSAHPPVSITTDHDAVIRAAIMHVFPGARHRF 385
Query: 553 SIYHLLDN--------FMKN--LKGPFHGEGKGSLPVNFLAAACAARLDSFRM-SAEQVK 601
+H+L F+K+ + FH + V + LD + + E ++
Sbjct: 386 CKWHILKKCQEKLSHVFLKHPSFESDFHKCVNLTESVEDFERCWFSLLDKYELRDHEWLQ 445
Query: 602 KVSSNAFDWMMQIAPEYWTNAAFKGESYQHITFDVAESYANWIEEVWELPLIQKL-ERLL 660
+ S+ W+ P Y + F S H + + + +I L KL E+ L
Sbjct: 446 AIYSDRRQWV----PVYLRDTFFADMSLTHRSDSINSYFDGYINASTNLSQFFKLYEKAL 501
Query: 661 CKMTE---MINNRRMNSSGWFTKLIPSREQLVKDASRR--AHYLKVLFSSDTLFEVQGDS 715
E + MNS P +Q + +R+ + + L + T + D
Sbjct: 502 ESRLEKEVKADYDTMNSPPVLKTPSPMEKQASELYTRKLFMRFQEELVGTLTFMASKADD 561
Query: 716 -----------------THVVDMN----KRDCSCLVWKATGLPCHHAIAVFNSTG 749
H V N + +CSC +++ +G+ C H +AVF T
Sbjct: 562 DGDLVTYQVAKYGEAHKAHFVKFNVLEMRANCSCQMFEFSGIICRHILAVFRVTN 616
>sp|Q9LIE5|FHY3_ARATH Protein FAR-RED ELONGATED HYPOCOTYL 3 OS=Arabidopsis thaliana
GN=FHY3 PE=1 SV=1
Length = 839
Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 76/384 (19%), Positives = 144/384 (37%), Gaps = 57/384 (14%)
Query: 232 DDDMEEERDTSAGLDGTNGALDVASEFNNLSPEEMVAMWKDSITGVGQEFKSVIEFRDAL 291
D +E D S G+ G L +E NL P G EF+S E
Sbjct: 39 DVSVEVNTDDSVGMGVPTGELVEYTEGMNLEPLN------------GMEFESHGEAYSFY 86
Query: 292 QRFSIAHRFRYKF---KKNETSR----ASGMCAAEGCSWSFYASW-VPSERVFKI--KKM 341
Q +S A F ++++T+R A C+ G + S+ P R K + M
Sbjct: 87 QEYSRAMGFNTAIQNSRRSKTTREFIDAKFACSRYGTKREYDKSFNRPRARQSKQDPENM 146
Query: 342 NETHTCGESSKTA------HPTKNWLVSIIKDKLRESPHH--KPKEISKSILRDFGVTLN 393
TC ++ A P W +I +RE H + +S+ + +
Sbjct: 147 AGRRTCAKTDCKASMHVKRRPDGKW---VIHSFVREHNHELLPAQAVSEQTRKIYAAMAK 203
Query: 394 YSQVYRGIEGAREQLQGSYKEA---------YNQLPWFCDKLLEANPGSFIKLLIDNDKK 444
Y+ + + + S+++ + L F ++ N F + + +D++
Sbjct: 204 QFAEYKTVISLKSDSKSSFEKGRTLSVETGDFKILLDFLSRMQSLNSNFFYAVDLGDDQR 263
Query: 445 FQRLFISFDASIHGFQNGCRPLLFLDSTSLRSKYHEILLTATALDGDDCIFPVAFAIVDT 504
+ +F S H + + C ++ LD+T +R+KY L ++ + A++
Sbjct: 264 VKNVFWVDAKSRHNYGSFC-DVVSLDTTYVRNKYKMPLAIFVGVNQHYQYMVLGCALISD 322
Query: 505 ENDDSWNWFLEELRSAVSSSRSITFVSDKQKGLMESVLKIFENAHHGYSIYHLL------ 558
E+ +++W +E A+ +++ + V +IF N H ++H+L
Sbjct: 323 ESAATYSWLMETWLRAIGGQAPKVLITELDVVMNSIVPEIFPNTRHCLFLWHVLMKVSEN 382
Query: 559 --------DNFMKNLKGPFHGEGK 574
DNFM + + GK
Sbjct: 383 LGQVVKQHDNFMPKFEKCIYKSGK 406
>sp|Q9SSQ4|FRS6_ARATH Protein FAR1-RELATED SEQUENCE 6 OS=Arabidopsis thaliana GN=FRS6
PE=2 SV=1
Length = 703
Score = 43.1 bits (100), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 32/147 (21%), Positives = 74/147 (50%), Gaps = 3/147 (2%)
Query: 421 WFCDKLLEANPGSFIKLLIDNDKKFQRLFISFDASIHGFQNGCRPLLFLDSTSLRSKYHE 480
+FC ++ NP F + ++++ + + +F + DA + ++F+DS+ + K+
Sbjct: 254 YFC-RMQLTNPNFFYLMDVNDEGQLRNVFWA-DAFSKVSCSYFGDVIFIDSSYISGKFEI 311
Query: 481 ILLTATALDGDDCIFPVAFAIVDTENDDSWNWFLEELRSAVSSSRSITFVSDKQKGLMES 540
L+T T ++ ++ + E +S++W L+ S + S T V+D+ K L +
Sbjct: 312 PLVTFTGVNHHGKTTLLSCGFLAGETMESYHWLLKVWLSVMKRSPQ-TIVTDRCKPLEAA 370
Query: 541 VLKIFENAHHGYSIYHLLDNFMKNLKG 567
+ ++F +H +S+ H++ + L G
Sbjct: 371 ISQVFPRSHQRFSLTHIMRKIPEKLGG 397
>sp|Q9M8J3|FRS7_ARATH Protein FAR1-RELATED SEQUENCE 7 OS=Arabidopsis thaliana GN=FRS7
PE=2 SV=1
Length = 764
Score = 42.7 bits (99), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 62/282 (21%), Positives = 113/282 (40%), Gaps = 42/282 (14%)
Query: 500 AIVDTENDDSWNWFLEELRSAVSSSRSITFVSDKQKGLMESVLKIFENAHHGYSIYHLLD 559
A+V E+ ++++W + A+S R + V+D+ + ++V ++F HH +S + +
Sbjct: 409 ALVADESKEAFSWLFQTWLRAMSGRRPRSMVADQDLPIQQAVAQVFPGTHHRFSAWQIRS 468
Query: 560 NFMKNLKGPFHGEGKGSLPVNFLAAACAARLDSFRMSAEQVKKVSSNAFDWMMQIAP--E 617
+NL+ F E K + D+ M + V K W+ +I E
Sbjct: 469 KERENLRS-FPNEFKYEYEKCLYQSQTTVEFDT--MWSSLVNKYGLRDNMWLREIYEKRE 525
Query: 618 YWT----NAAFKGESYQHITFDVAESYANWIEEVWEL-PLIQKLERLLCKMTEMINNRRM 672
W A+F G + TFD Y + + L I + E+ L + E
Sbjct: 526 KWVPAYLRASFFGGIHVDGTFD--PFYGTSLNSLTSLREFISRYEQGLEQRREEERKEDF 583
Query: 673 NSSGWFTKLIPSREQLVKDASRRAHYLKV--LFSSD------------------TLFEVQ 712
NS + ++E V++ RR + L + +F S+ + F V+
Sbjct: 584 NSYN-LQPFLQTKEP-VEEQCRRLYTLTIFRIFQSELAQSYNYLGLKTYEEGAISRFLVR 641
Query: 713 G----DSTHVVDMNKRD----CSCLVWKATGLPCHHAIAVFN 746
+ H V + + CSC +++ GL C H + VFN
Sbjct: 642 KCGNENEKHAVTFSASNLNASCSCQMFEYEGLLCRHILKVFN 683
>sp|Q3E7I5|FRS12_ARATH Protein FAR1-RELATED SEQUENCE 12 OS=Arabidopsis thaliana GN=FRS12
PE=2 SV=1
Length = 788
Score = 42.0 bits (97), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 59/280 (21%), Positives = 115/280 (41%), Gaps = 38/280 (13%)
Query: 500 AIVDTENDDSWNWFLEELRSAVSSSRSITFVSDKQKGLMESVLKIFENAHHGYSIYHLLD 559
A+V E+ +++ W + A+S R + V+D+ + ++++++F AHH YS + + +
Sbjct: 433 AMVADESKEAFLWLFQTWLRAMSGRRPRSIVADQDLPIQQALVQVFPGAHHRYSAWQIRE 492
Query: 560 NFMKNLKGPFHGEGKGSLPVNFLAAACAARLDSFRMSAEQVKKVSSNAFDWMMQIAP--E 617
+NL PF E K DS + + + K W+ +I E
Sbjct: 493 KERENLI-PFPSEFKYEYEKCIYQTQTIVEFDS--VWSALINKYGLRDDVWLREIYEQRE 549
Query: 618 YWTNAAFKGESYQHITFD--VAESYANWIEEVWEL-PLIQKLERLLCKMTEMINNRRMNS 674
W A + + I + + + ++ + L I + E+ L + E NS
Sbjct: 550 NWVPAYLRASFFAGIPINGTIEPFFGASLDALTPLREFISRYEQALEQRREEERKEDFNS 609
Query: 675 SGWFTKLIPSREQLVKDASRRAHYLKV--LFSSDTL------------------FEVQ-- 712
+ ++E V++ RR + L V +F ++ + F V+
Sbjct: 610 YN-LQPFLQTKEP-VEEQCRRLYTLTVFRIFQNELVQSYNYLCLKTYEEGAISRFLVRKC 667
Query: 713 GDST--HVVDMNKRD----CSCLVWKATGLPCHHAIAVFN 746
G+ + H V + + CSC +++ GL C H + VFN
Sbjct: 668 GNESEKHAVTFSASNLNSSCSCQMFEHEGLLCRHILKVFN 707
>sp|Q9ZVC9|FRS3_ARATH Protein FAR1-RELATED SEQUENCE 3 OS=Arabidopsis thaliana GN=FRS3
PE=2 SV=2
Length = 851
Score = 41.2 bits (95), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 78/389 (20%), Positives = 156/389 (40%), Gaps = 76/389 (19%)
Query: 413 KEAYNQLPWFCDKLLEANPGSFIKLLIDNDKKFQRLFISFDASIHGFQNGCRPLLFLDST 472
++A+N L +F ++ NPG F + +D D + +F + S + + F D+
Sbjct: 195 RDAHNLLEYF-KRMQAENPGFFYAVQLDEDNQMSNVFWADSRSRVAYTH------FGDTV 247
Query: 473 SLRSKYH-------EILLTATALDGDDCIFPVAFAIVDTENDDSWNWFLEELRSAVSSSR 525
+L ++Y T G +F A I+D E+D S+ W + +A+
Sbjct: 248 TLDTRYRCNQFRVPFAPFTGVNHHGQAILFGCAL-ILD-ESDTSFIWLFKTFLTAMRDQP 305
Query: 526 SITFVSDKQKGLMESVLKIFENAHHGYSIYHLLDNFMKNLKG------PFHGEGKGSLPV 579
++ V+D+ + + + ++F A H + + +L + L F E +
Sbjct: 306 PVSLVTDQDRAIQIAAGQVFPGARHCINKWDVLREGQEKLAHVCLAYPSFQVELYNC--I 363
Query: 580 NFLAAACAARLDSFRMS-AEQVKKVSSNAFDWM-------MQIAPEYWTN----AAFKGE 627
NF ++ F S + + K +W+ Q P Y+ + A F +
Sbjct: 364 NFTET-----IEEFESSWSSVIDKYDLGRHEWLNSLYNARAQWVPVYFRDSFFAAVFPSQ 418
Query: 628 SYQHITFDVAESYANWIEEVWELPLIQKL-ERLLCKMTEM--------INNRRM------ 672
Y FD ++ + LP+ +L ER + EM +N +
Sbjct: 419 GYSGSFFD------GYVNQQTTLPMFFRLYERAMESWFEMEIEADLDTVNTPPVLKTPSP 472
Query: 673 ---NSSGWFTKLIPSR--EQLVKDASRRAHYLKVLFSSDTL----FEVQGDSTHVVDM-- 721
++ FT+ I + E+LV+ + A+ ++ ++ T FE + ++V
Sbjct: 473 MENQAANLFTRKIFGKFQEELVETFAHTANRIEDDGTTSTFRVANFE-NDNKAYIVTFCY 531
Query: 722 --NKRDCSCLVWKATGLPCHHAIAVFNST 748
+ +CSC +++ +G+ C H + VF T
Sbjct: 532 PEMRANCSCQMFEHSGILCRHVLTVFTVT 560
>sp|Q9S793|FRS8_ARATH Protein FAR1-RELATED SEQUENCE 8 OS=Arabidopsis thaliana GN=FRS8
PE=2 SV=2
Length = 725
Score = 37.7 bits (86), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 18/100 (18%), Positives = 47/100 (47%)
Query: 466 LLFLDSTSLRSKYHEILLTATALDGDDCIFPVAFAIVDTENDDSWNWFLEELRSAVSSSR 525
+L D+T L + Y L+ ++ + ++ ++ +++ W + +
Sbjct: 321 VLLFDTTCLSNAYELPLVAFVGINHHGDTILLGCGLLADQSFETYVWLFRAWLTCMLGRP 380
Query: 526 SITFVSDKQKGLMESVLKIFENAHHGYSIYHLLDNFMKNL 565
F++++ K + +V ++F AHH S+ H+L N +++
Sbjct: 381 PQIFITEQCKAMRTAVSEVFPRAHHRLSLTHVLHNICQSV 420
>sp|Q3EBQ3|FRS2_ARATH Protein FAR1-RELATED SEQUENCE 2 OS=Arabidopsis thaliana GN=FRS2
PE=2 SV=1
Length = 807
Score = 37.7 bits (86), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 28/153 (18%), Positives = 67/153 (43%), Gaps = 2/153 (1%)
Query: 425 KLLEANPGSFIKLLIDNDKKFQRLFISFDASIHGFQNGCRPLLFLDSTSLRSKYHEILLT 484
++ + PG F + D+DK+ + +F + H + + +LF D+ +R+ Y
Sbjct: 179 EMQDKQPGFFYAVDFDSDKRVRNVFWLDAKAKHDYCSFSDVVLF-DTFYVRNGYRIPFAP 237
Query: 485 ATALDGDDCIFPVAFAIVDTENDDSWNWFLEELRSAVSSSRSITFVSDKQKGLMESVLKI 544
+ + A++ ++ +++W AV ++D+ K L + V+++
Sbjct: 238 FIGVSHHRQYVLLGCALIGEVSESTYSWLFRTWLKAVGGQAPGVMITDQDKLLSDIVVEV 297
Query: 545 FENAHHGYSIYHLLDNFMKNLKGPFHGEGKGSL 577
F + H + ++ +L + L PF + G +
Sbjct: 298 FPDVRHIFCLWSVLSKISEMLN-PFVSQDDGFM 329
>sp|P19596|FGF1_CHICK Fibroblast growth factor 1 OS=Gallus gallus GN=FGF1 PE=1 SV=2
Length = 155
Score = 35.0 bits (79), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 33/74 (44%), Gaps = 4/74 (5%)
Query: 310 SRASGMCAAEGCSWSFYASWVPSERVFKIKKMNETHTCGESSKTAHPTKNWLVSIIKD-- 367
S ASG A + Y S +P E ++++ E H SK H KNW V + K+
Sbjct: 73 STASGQYLAMDTNGLLYGSQLPGEECLFLERLEENHYNTYISK-KHADKNWFVGLKKNGN 131
Query: 368 -KLRESPHHKPKEI 380
KL H+ K I
Sbjct: 132 SKLGPRTHYGQKAI 145
>sp|P19775|TRA6_STAAU Transposase for insertion sequence element IS256 in transposon
Tn4001 OS=Staphylococcus aureus GN=tnp PE=3 SV=1
Length = 390
Score = 34.7 bits (78), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 52/129 (40%), Gaps = 27/129 (20%)
Query: 489 DGDDCIFPVAFAIVDTENDDSWNWFLEELRSAVSSSRSITFVSDKQKGLMESVLKIFENA 548
DGD I + F I E++++W F E L+ + +SD KGL+ ++ K F N
Sbjct: 193 DGDREI--IGFMIQSGESEETWTTFFEYLKERGLQGTELV-ISDAHKGLVSAIRKSFTNV 249
Query: 549 HHGYSIYHLLDN------------FMKNLKGPFH-------GEGKGSLPVNFL-----AA 584
H L N F + +KG F E K L +++ +
Sbjct: 250 SWQRCQVHFLRNIFTTIPKKNSKSFREAVKGIFKFTDINLAREAKNRLIHDYIDQPKYSK 309
Query: 585 ACAARLDSF 593
ACA+ D F
Sbjct: 310 ACASLDDGF 318
>sp|P59787|TRA6_ENTFA Transposase for insertion sequence element IS256 in transposon
Tn4001 OS=Enterococcus faecalis (strain ATCC 700802 /
V583) GN=EF_0125 PE=3 SV=1
Length = 390
Score = 34.7 bits (78), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 52/129 (40%), Gaps = 27/129 (20%)
Query: 489 DGDDCIFPVAFAIVDTENDDSWNWFLEELRSAVSSSRSITFVSDKQKGLMESVLKIFENA 548
DGD I + F I E++++W F E L+ + +SD KGL+ ++ K F N
Sbjct: 193 DGDREI--IGFMIQSGESEETWTTFFEYLKERGLQGTELV-ISDAHKGLVSAIRKSFTNV 249
Query: 549 HHGYSIYHLLDN------------FMKNLKGPFH-------GEGKGSLPVNFL-----AA 584
H L N F + +KG F E K L +++ +
Sbjct: 250 SWQRCQVHFLRNIFTTIPKKNSKSFREAVKGIFKFTDINLAREAKNRLIHDYIDQPKYSK 309
Query: 585 ACAARLDSF 593
ACA+ D F
Sbjct: 310 ACASLDDGF 318
>sp|C0LGD6|Y1570_ARATH Probable LRR receptor-like serine/threonine-protein kinase
At1g05700 OS=Arabidopsis thaliana GN=At1g05700 PE=2 SV=1
Length = 852
Score = 34.7 bits (78), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 71/177 (40%), Gaps = 16/177 (9%)
Query: 130 TVSPSKASKALVTTDPVSTPAGPSAANLTPNSLADPADGTAHSPITYDVSATPADTVKKR 189
++ P++ + ++ + V+ AG S L N+ + + S I + + TP T+
Sbjct: 289 SLKPNQTREFDISINGVTVAAGFSPKYLQTNTFF--LNPESQSKIAFSLVRTPKSTLPPI 346
Query: 190 RRA----------ASRKNSTDAPTAAVTKTVRKTKKMAPRRKRMRKDYLTE----SDDDM 235
A S N D KT K KK + DY+ E S D +
Sbjct: 347 VNALEIYVANSFSQSLTNQEDGDAVTSLKTSYKVKKNWHGDPCLPNDYIWEGLNCSYDSL 406
Query: 236 EEERDTSAGLDGTNGALDVASEFNNLSPEEMVAMWKDSITGVGQEFKSVIEFRDALQ 292
R TS L + ++S F+NL+ + + + + +TG EF S ++F L
Sbjct: 407 TPPRITSLNLSSSGLTGHISSSFSNLTMIQELDLSNNGLTGDIPEFLSKLKFLRVLN 463
>sp|O75179|ANR17_HUMAN Ankyrin repeat domain-containing protein 17 OS=Homo sapiens
GN=ANKRD17 PE=1 SV=3
Length = 2603
Score = 34.3 bits (77), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 60/152 (39%), Gaps = 24/152 (15%)
Query: 159 PNSL--ADPADGTAHSPITYDVSATPADTVKKRRRAASRKNSTDAPTAAVTKTVRKTKKM 216
PN+L A P D T +P ++D++ P V+ + D P A V T+ K
Sbjct: 720 PNNLLSAPPPDVTQLTPPSHDLNRAPRVPVQALPMVVPPQEP-DKPPANVATTLPIRNKA 778
Query: 217 APRRKRMRKDYLTESDDDMEEERDTSAGLDGTNGALDVASEFNNLSPEEMVAMWKDSITG 276
A ++K +S+ L + DV N SPE +V + +T
Sbjct: 779 ASKQK-------------------SSSHLPAN--SQDVQGYITNQSPESIVEEAQGKLTE 817
Query: 277 VGQEFKSVIEFRDALQRFSIAHRFRYKFKKNE 308
+ Q K IE LQ +AH + +K E
Sbjct: 818 LEQRIKEAIEKNAQLQSLELAHADQLTKEKIE 849
>sp|Q21MA8|SYP_SACD2 Proline--tRNA ligase OS=Saccharophagus degradans (strain 2-40 /
ATCC 43961 / DSM 17024) GN=proS PE=3 SV=1
Length = 575
Score = 34.3 bits (77), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 33/54 (61%)
Query: 96 GSVTADVFVIGTSGFDREAFAIETGRASGIKLAETVSPSKASKALVTTDPVSTP 149
G+ + + V+ SG D AF+ E+ A+ ++LAE ++P+K + + + V+TP
Sbjct: 204 GTGSHEFHVLADSGEDDIAFSTESNFAANVELAEALAPAKQTAEPLPREEVATP 257
>sp|B4F025|PCKA_PROMH Phosphoenolpyruvate carboxykinase [ATP] OS=Proteus mirabilis
(strain HI4320) GN=pckA PE=3 SV=1
Length = 539
Score = 33.9 bits (76), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Query: 685 REQLVKDASRRAHYLKVLFSSDTLFEVQGDSTHVVDMNKRDCSCLVWKATGLPCHHAIAV 744
+ + + + + +AH++K +F T E++ + + MN C+ WKA GL + +A
Sbjct: 133 KVRFITEVAWQAHFVKNMFIRPTQEELENFTPDFIVMNGAKCTNPNWKAQGLNSENFVA- 191
Query: 745 FNSTGR 750
FN T R
Sbjct: 192 FNLTER 197
>sp|Q9SY66|FRS11_ARATH Protein FAR1-RELATED SEQUENCE 11 OS=Arabidopsis thaliana GN=FRS11
PE=2 SV=1
Length = 680
Score = 33.5 bits (75), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 29/141 (20%), Positives = 58/141 (41%), Gaps = 5/141 (3%)
Query: 423 CDKLLEANPGSFIKLLIDNDKKFQRLFISFDASIHGFQNGCRPLLFLDSTSLRSKYHEIL 482
C + E +P + +D + K + + S+ +SI ++ ++F D+T S L
Sbjct: 235 CQSIKEKDPNFKFEFTLDANDKLENIAWSYASSIQSYELFGDAVVF-DTTHRLSAVEMPL 293
Query: 483 LTATALD--GDDCIFPVAFAIVDTENDDSWNWFLEELRSAVSSSRSITFVSDKQKGLMES 540
++ G C F ++ EN SW+W L+ ++ T ++D L E+
Sbjct: 294 GIWVGVNNYGVPCFF--GCVLLRDENLRSWSWALQAFTGFMNGKAPQTILTDHNMCLKEA 351
Query: 541 VLKIFENAHHGYSIYHLLDNF 561
+ H I+ ++ F
Sbjct: 352 IAGEMPATKHALCIWMVVGKF 372
>sp|B3EJK9|ATPB_CHLPB ATP synthase subunit beta OS=Chlorobium phaeobacteroides (strain
BS1) GN=atpD PE=3 SV=1
Length = 462
Score = 33.1 bits (74), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 36/84 (42%), Gaps = 8/84 (9%)
Query: 92 DFHEGSVTADVFVIGTSGFDREAFAIETGRASGIKLAETVSPSKASKALV-------TTD 144
DF EG + A + + + D +ET + G + T+S A+ LV T
Sbjct: 17 DFQEGGLPAILDALTVARPDGTKLVLETQQHLGEERVRTIS-MDATDGLVRGMPVINTGK 75
Query: 145 PVSTPAGPSAANLTPNSLADPADG 168
P+ P GP+ N + DP DG
Sbjct: 76 PIQVPVGPNVLGRMLNVVGDPIDG 99
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.131 0.389
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 313,614,426
Number of Sequences: 539616
Number of extensions: 13134263
Number of successful extensions: 41929
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 85
Number of HSP's that attempted gapping in prelim test: 41557
Number of HSP's gapped (non-prelim): 427
length of query: 842
length of database: 191,569,459
effective HSP length: 126
effective length of query: 716
effective length of database: 123,577,843
effective search space: 88481735588
effective search space used: 88481735588
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 66 (30.0 bits)