Your job contains 1 sequence.
>003178
MSSSVLLQRSKPLTNILWFNRVFARPMGGGPRTFPGGLNKWQWKRMHEKKAKEKEKRLLE
QEKQLYQARVRSQIRTKLFDKADPDSETNQHKPMSPDEHVKALADRFMKEGAEDLWNEDD
GPVKSEQRPRSGAEANQRPRLAGAPIDLRGLISDKRNSVNNSGNLNSGSNVKTRNYSVLS
ESKFSDRSKSASLIFMPNLECNDGETVIPSRNVMDFVRRAYFSGTDKRNFCRNDGSSTRD
KAGFDTGNKAKPFARNLGNNRENGDSKNMSEFMKKKCFVGKRRFKRNESSSSDDDSDIDS
EDVDEKVEGWRDVKKMGSSASLGKYDMKITKRVPLKSLEDEHDFEEQVELIRKEISKNKL
NGNGEKKEKREEEPILSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAV
VKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLK
NHDGIGVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVL
DEADHLLDLGFRKDVENIVDCLPRRRQSLLFSATMPKELVLKREHTYIDTVGLGSVETPV
KIKQSCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVRE
MYSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLG
RTGREGKEGEGVLLLAPWEEYFLDDLKDLPLDKLQLPHLNPEIQLQMDNHMAKIDNNVKE
AAYHAWLGYYNSIREIGRDKTTLVELANKFAQSIGLQRPPPLFRKTALKMGLKDIPGIRL
RK
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 003178
(842 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2038431 - symbol:AT1G63250 species:3702 "Arabi... 1777 9.2e-224 2
TAIR|locus:2054688 - symbol:AT2G07750 species:3702 "Arabi... 1781 1.4e-183 1
TAIR|locus:2159517 - symbol:PDE340 "PIGMENT DEFECTIVE 340... 1325 2.9e-135 1
TAIR|locus:2159527 - symbol:STRS2 "STRESS RESPONSE SUPPRE... 1245 8.7e-127 1
UNIPROTKB|Q2KEF1 - symbol:MGCH7_ch7g1085 "Putative unchar... 616 3.9e-60 1
ASPGD|ASPL0000028276 - symbol:AN5623 species:162425 "Emer... 536 1.2e-51 1
UNIPROTKB|G4MSR4 - symbol:MGG_07099 "Uncharacterized prot... 379 8.8e-49 3
UNIPROTKB|E2RC35 - symbol:DDX10 "Uncharacterized protein"... 528 9.6e-49 1
MGI|MGI:1924841 - symbol:Ddx10 "DEAD (Asp-Glu-Ala-Asp) bo... 524 3.2e-48 1
RGD|1308990 - symbol:Ddx10 "DEAD (Asp-Glu-Ala-Asp) box po... 523 4.4e-48 1
GENEDB_PFALCIPARUM|PF13_0037 - symbol:PF13_0037 "DEAD box... 504 4.9e-48 1
UNIPROTKB|Q8IEP2 - symbol:PF13_0037 "DEAD box helicase, p... 504 4.9e-48 1
UNIPROTKB|Q08DT0 - symbol:DDX10 "Uncharacterized protein"... 521 7.9e-48 1
UNIPROTKB|E9PIF2 - symbol:DDX10 "Probable ATP-dependent R... 518 1.4e-47 1
UNIPROTKB|Q13206 - symbol:DDX10 "Probable ATP-dependent R... 518 1.9e-47 1
POMBASE|SPAC1093.05 - symbol:SPAC1093.05 "ATP-dependent R... 506 1.4e-46 1
DICTYBASE|DDB_G0282741 - symbol:ddx18 "DEAD/DEAH box heli... 487 4.4e-46 1
ZFIN|ZDB-GENE-030131-9685 - symbol:ddx18 "DEAD (Asp-Glu-A... 487 4.4e-46 1
DICTYBASE|DDB_G0284017 - symbol:ddx10 "DEAD/DEAH box heli... 503 4.6e-46 2
UNIPROTKB|Q81QF0 - symbol:BAS2301 "ATP-dependent RNA heli... 486 5.7e-46 1
TIGR_CMR|BA_2475 - symbol:BA_2475 "ATP-dependent RNA heli... 486 5.7e-46 1
SGD|S000003570 - symbol:HCA4 "DEAD box RNA helicase" spec... 497 3.1e-45 1
ASPGD|ASPL0000061778 - symbol:AN0589 species:162425 "Emer... 492 1.7e-44 1
UNIPROTKB|F1P0I3 - symbol:DDX10 "Probable ATP-dependent R... 493 1.9e-44 1
UNIPROTKB|Q5ZJF6 - symbol:DDX10 "Probable ATP-dependent R... 493 1.9e-44 1
WB|WBGene00012059 - symbol:T26G10.1 species:6239 "Caenorh... 470 3.6e-44 1
UNIPROTKB|F1N533 - symbol:DDX18 "Uncharacterized protein"... 463 4.3e-44 2
POMBASE|SPAC1F7.02c - symbol:has1 "ATP-dependent RNA heli... 452 4.7e-44 2
UNIPROTKB|F1MSX0 - symbol:F1MSX0 "Uncharacterized protein... 463 5.1e-44 2
UNIPROTKB|F1NEQ3 - symbol:DDX18 "Uncharacterized protein"... 472 1.6e-43 2
TAIR|locus:2086909 - symbol:AT3G18600 species:3702 "Arabi... 458 7.8e-43 1
MGI|MGI:1914192 - symbol:Ddx18 "DEAD (Asp-Glu-Ala-Asp) bo... 468 1.5e-42 1
CGD|CAL0004182 - symbol:HCA4 species:5476 "Candida albica... 473 2.0e-42 1
UNIPROTKB|D4A824 - symbol:Ddx18 "Protein Ddx18" species:1... 466 3.0e-42 1
FB|FBgn0025140 - symbol:pit "pitchoune" species:7227 "Dro... 467 3.5e-42 1
RGD|1549712 - symbol:Ddx18 "DEAD (Asp-Glu-Ala-Asp) box po... 466 3.9e-42 2
CGD|CAL0003050 - symbol:HAS1 species:5476 "Candida albica... 450 6.0e-42 1
UNIPROTKB|Q5AK59 - symbol:HAS1 "ATP-dependent RNA helicas... 450 6.0e-42 1
WB|WBGene00015232 - symbol:B0511.6 species:6239 "Caenorha... 449 7.7e-42 1
UNIPROTKB|E2RFA3 - symbol:DDX18 "Uncharacterized protein"... 460 8.4e-42 2
UNIPROTKB|Q5ZLB0 - symbol:DDX47 "Uncharacterized protein"... 448 9.9e-42 1
ZFIN|ZDB-GENE-071022-2 - symbol:ddx10 "DEAD (Asp-Glu-Ala-... 469 1.1e-41 1
UNIPROTKB|Q29S22 - symbol:DDX47 "Probable ATP-dependent R... 447 1.3e-41 1
UNIPROTKB|I3L976 - symbol:DDX47 "Uncharacterized protein"... 447 1.3e-41 1
MGI|MGI:1915005 - symbol:Ddx47 "DEAD (Asp-Glu-Ala-Asp) bo... 447 1.3e-41 1
UNIPROTKB|G3V727 - symbol:Ddx47 "Protein Ddx47" species:1... 447 1.3e-41 1
UNIPROTKB|Q9NVP1 - symbol:DDX18 "ATP-dependent RNA helica... 461 1.3e-41 2
UNIPROTKB|E2RN03 - symbol:DDX47 "Uncharacterized protein"... 446 1.6e-41 1
UNIPROTKB|Q9H0S4 - symbol:DDX47 "Probable ATP-dependent R... 446 1.6e-41 1
UNIPROTKB|I3L840 - symbol:DDX18 "Uncharacterized protein"... 460 2.0e-41 1
SGD|S000004903 - symbol:HAS1 "ATP-dependent RNA helicase"... 445 2.1e-41 1
UNIPROTKB|F1RY13 - symbol:DDX18 "Uncharacterized protein"... 460 2.2e-41 1
ZFIN|ZDB-GENE-050522-359 - symbol:zgc:112350 "zgc:112350"... 430 3.0e-41 2
UNIPROTKB|I3L7B7 - symbol:DDX18 "Uncharacterized protein"... 460 3.4e-41 1
ASPGD|ASPL0000013201 - symbol:AN4233 species:162425 "Emer... 443 3.5e-41 1
TIGR_CMR|CPS_2658 - symbol:CPS_2658 "ATP-dependent RNA he... 443 3.5e-41 1
ASPGD|ASPL0000044206 - symbol:AN1949 species:162425 "Emer... 446 6.6e-41 1
UNIPROTKB|A4RGU2 - symbol:DBP4 "ATP-dependent RNA helicas... 458 1.4e-40 1
UNIPROTKB|Q9KNA4 - symbol:VC_A0061 "ATP-dependent RNA hel... 437 1.6e-40 1
TIGR_CMR|VC_A0061 - symbol:VC_A0061 "ATP-dependent RNA he... 437 1.6e-40 1
UNIPROTKB|Q0C4B9 - symbol:HNE_0695 "Putative ATP-dependen... 436 2.1e-40 1
UNIPROTKB|Q8ECL2 - symbol:SO_3125 "ATP-dependent RNA heli... 434 3.4e-40 1
TIGR_CMR|SO_3125 - symbol:SO_3125 "ATP-dependent RNA heli... 434 3.4e-40 1
TAIR|locus:2152099 - symbol:AT5G65900 species:3702 "Arabi... 446 4.6e-40 1
UNIPROTKB|Q8EDC4 - symbol:SO_2838 "ATP-dependent RNA heli... 432 5.7e-40 1
TIGR_CMR|SO_2838 - symbol:SO_2838 "ATP-dependent RNA heli... 432 5.7e-40 1
FB|FBgn0032919 - symbol:CG9253 species:7227 "Drosophila m... 428 1.6e-39 1
UNIPROTKB|Q81JK1 - symbol:BAS5307 "ATP-dependent RNA heli... 427 2.0e-39 1
TIGR_CMR|BA_5703 - symbol:BA_5703 "ATP-dependent RNA heli... 427 2.0e-39 1
CGD|CAL0000056 - symbol:orf19.7546 species:5476 "Candida ... 426 2.6e-39 1
UNIPROTKB|P21693 - symbol:dbpA species:83333 "Escherichia... 425 3.3e-39 1
TIGR_CMR|SO_1383 - symbol:SO_1383 "ATP-dependent RNA heli... 425 3.3e-39 1
TIGR_CMR|GSU_0491 - symbol:GSU_0491 "ATP-dependent RNA he... 424 4.3e-39 1
TIGR_CMR|SPO_1443 - symbol:SPO_1443 "ATP-dependent RNA he... 423 5.5e-39 1
UNIPROTKB|Q3AFI3 - symbol:CHY_0229 "ATP-dependent RNA hel... 422 7.1e-39 1
TIGR_CMR|CHY_0229 - symbol:CHY_0229 "ATP-dependent RNA he... 422 7.1e-39 1
FB|FBgn0030855 - symbol:CG5800 species:7227 "Drosophila m... 443 7.9e-39 1
UNIPROTKB|P25888 - symbol:rhlE "ATP-dependent RNA helicas... 421 9.2e-39 1
UNIPROTKB|A0R8U6 - symbol:cshA "DEAD-box ATP-dependent RN... 419 1.5e-38 1
UNIPROTKB|Q47Z59 - symbol:CPS_3215 "Putative ATP-dependen... 419 1.5e-38 1
UNIPROTKB|Q63GX5 - symbol:cshA "DEAD-box ATP-dependent RN... 419 1.5e-38 1
UNIPROTKB|Q6HPE6 - symbol:cshA "DEAD-box ATP-dependent RN... 419 1.5e-38 1
UNIPROTKB|Q73EU1 - symbol:cshA "DEAD-box ATP-dependent RN... 419 1.5e-38 1
UNIPROTKB|Q81IT9 - symbol:cshA "DEAD-box ATP-dependent RN... 419 1.5e-38 1
UNIPROTKB|Q81VG0 - symbol:cshA "DEAD-box ATP-dependent RN... 419 1.5e-38 1
UNIPROTKB|Q9KMW4 - symbol:VC_A0204 "ATP-dependent RNA hel... 419 1.5e-38 1
TIGR_CMR|BA_0247 - symbol:BA_0247 "ATP-dependent RNA heli... 419 1.5e-38 1
TIGR_CMR|CPS_3215 - symbol:CPS_3215 "putative ATP-depende... 419 1.5e-38 1
TIGR_CMR|VC_A0204 - symbol:VC_A0204 "ATP-dependent RNA he... 419 1.5e-38 1
TAIR|locus:2087852 - symbol:PMH2 "putative mitochondrial ... 431 2.3e-38 1
WB|WBGene00021277 - symbol:Y23H5B.6 species:6239 "Caenorh... 435 3.8e-38 1
POMBASE|SPBC543.06c - symbol:dbp8 "ATP-dependent RNA heli... 415 4.2e-38 1
POMBASE|SPBC691.04 - symbol:SPBC691.04 "mitochondrial ATP... 415 4.2e-38 1
ASPGD|ASPL0000069536 - symbol:AN7424 species:162425 "Emer... 414 5.3e-38 1
TIGR_CMR|CPS_1418 - symbol:CPS_1418 "ATP-dependent RNA he... 413 6.9e-38 1
POMBASE|SPAC823.08c - symbol:SPAC823.08c "ATP-dependent R... 413 6.9e-38 1
ASPGD|ASPL0000054998 - symbol:AN0894 species:162425 "Emer... 429 7.2e-38 1
UNIPROTKB|Q9KS53 - symbol:VC1407 "ATP-dependent RNA helic... 409 1.9e-37 1
TIGR_CMR|VC_1407 - symbol:VC_1407 "ATP-dependent RNA heli... 409 1.9e-37 1
SGD|S000001107 - symbol:RRP3 "Protein involved in rRNA pr... 408 2.4e-37 1
WARNING: Descriptions of 756 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2038431 [details] [associations]
symbol:AT1G63250 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 EMBL:AC022355 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268799 UniGene:At.52694 ProtClustDB:CLSN2713541
IPI:IPI00538833 PIR:C96658 RefSeq:NP_176514.1 UniGene:At.36158
ProteinModelPortal:Q9C8S9 SMR:Q9C8S9 PaxDb:Q9C8S9 PRIDE:Q9C8S9
EnsemblPlants:AT1G63250.1 GeneID:842631 KEGG:ath:AT1G63250
GeneFarm:1027 TAIR:At1g63250 InParanoid:Q9C8S9 OMA:TSSRAHI
PhylomeDB:Q9C8S9 Genevestigator:Q9C8S9 GermOnline:AT1G63250
Uniprot:Q9C8S9
Length = 798
Score = 1777 (630.6 bits), Expect = 9.2e-224, Sum P(2) = 9.2e-224
Identities = 366/635 (57%), Positives = 453/635 (71%)
Query: 218 RRAYFSGTD-KRNFCRNDGSSTRDKAGFDTGNKAKPFARNLGNNREN-GDSKNMSEFMKK 275
RR + S + KRN D D DT PF+ +E S+++ ++
Sbjct: 171 RRGFSSMSRFKRNESSCDEGDDFDAKKLDT---LSPFSPKFAGTKEKVKSSRSVVGVIRN 227
Query: 276 KCFVGKRRFKRNXXXXXXXXXXXXXXXXXXKVEGWRDVKKMGSSASLGKYDMKITKRVPL 335
K G+R+F++N K+ GW D++K GSSASLG +D+K+TKRV
Sbjct: 228 KGLFGRRKFRKNDSSTEEDSDEEGDEG---KMIGWMDMRKTGSSASLGNHDIKLTKRVN- 283
Query: 336 KSLEDEHDFEE-QVELIRKEISXXXXXXXXXXXXXXXXXPILSQKRFDECGISPLTIKAL 394
+++ DE + + +R+++S I S KRFDE ISPLT+KAL
Sbjct: 284 RNVTDEELYPPLDINTVREDLSKRKSVDNVMEEKQEPHDSIYSAKRFDESCISPLTLKAL 343
Query: 395 TAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSST-TQLV 453
+A+G ++MTRVQ+ATLS CL+GKDA+VKAKTGTGKS+AFLLPAIE VLKA +S V
Sbjct: 344 SASGILKMTRVQDATLSECLDGKDALVKAKTGTGKSMAFLLPAIETVLKAMNSGKGVNKV 403
Query: 454 PPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILVA 513
PI+ LILCPTRELASQIAAE ALLK HDGIGV TL+GGTRFK+DQ+RLES+PCQIL+A
Sbjct: 404 APIFALILCPTRELASQIAAEGKALLKFHDGIGVQTLIGGTRFKLDQQRLESEPCQILIA 463
Query: 514 TPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQSLLFSA 573
TPGRLLDHIENKSGL+ RLM LK+ ++DEAD LLDLGFR+DVE I+DCLPR+RQSLLFSA
Sbjct: 464 TPGRLLDHIENKSGLTSRLMALKLFIVDEADLLLDLGFRRDVEKIIDCLPRQRQSLLFSA 523
Query: 574 TMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILHHLLKEHIL 627
T+PKE LVLKR+H+YIDT+GLG VET K++QSC+VAPHE HF ++ HLLKEHI
Sbjct: 524 TIPKEVRRVSQLVLKRDHSYIDTIGLGCVETHDKVRQSCIVAPHESHFHLVPHLLKEHIN 583
Query: 628 GTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEFRASKRLILVT 687
TPDYK+IVFCSTGMVTSL+Y LLREMK+NVRE+++RKPQL+R R+S+EF+ S RLILVT
Sbjct: 584 NTPDYKIIVFCSTGMVTSLMYTLLREMKLNVREIHARKPQLHRTRVSDEFKESNRLILVT 643
Query: 688 SDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXXXXXXXVLLLAPWEEYFXXXXX 747
SDVSARGM+YPDVT V+QVGIP DREQYIH +LL+APWE YF
Sbjct: 644 SDVSARGMNYPDVTLVIQVGIPSDREQYIHRLGRTGREGKGGEGLLLIAPWERYFLDELK 703
Query: 748 XXXXXXXXXXXXNPEIQLQMDNHMAKIDNNVKEAAYHAWLGYYNSIREIGRDKTTLVELA 807
+ ++ Q+D MAKID ++KEAAYHAWLGYYNS+RE GRDKTTL ELA
Sbjct: 704 DLPLEPIPAPDLDSIVKHQVDQSMAKIDTSIKEAAYHAWLGYYNSVRETGRDKTTLAELA 763
Query: 808 NKFAQSIGLQRPPPLFRKTALKMGLKDIPGIRLRK 842
N+F SIGL++PP LFR+TA+KMGLK I GI +RK
Sbjct: 764 NRFCHSIGLEKPPALFRRTAVKMGLKGISGIPIRK 798
Score = 406 (148.0 bits), Expect = 9.2e-224, Sum P(2) = 9.2e-224
Identities = 104/263 (39%), Positives = 135/263 (51%)
Query: 1 MSSSVLLQRSKPLTNILWFNRVFARPMGGGPRTFPGGLNKWQWKRMHXXXXXXXXXXXXX 60
M S +L +RS +T LW NR+ +R MGGGPRTFPGGLNKWQWKRMH
Sbjct: 1 MYSLILRERSGSITGSLW-NRISSRNMGGGPRTFPGGLNKWQWKRMHEKKAREKENKLLD 59
Query: 61 XXXXXXXARVRSQIRTKLFDKADPDSET----NQHKPMSPDEHVKALADRFMKEGAEDLW 116
AR+R++IR K++ D +T H PMSP EH+K LADRFMK GAED W
Sbjct: 60 QEKQLYEARIRTEIRAKMWGNPDSGEKTAKSKQSHGPMSPKEHIKTLADRFMKAGAEDFW 119
Query: 117 NEDDGPVK-SEQRPRSGAEANQRPRLAGAPIDLRGLIS---D---KRXXXXXXXXXXXXX 169
NE+DGPVK S+Q RSG+++ + +PID+R L+S D K
Sbjct: 120 NENDGPVKKSDQGSRSGSDSIDST--SNSPIDVRRLVSATCDSMGKNRVFGSSRRGFSSM 177
Query: 170 XXKTRNYSVLSESKFSDRSKSASLI-FMPNLECNDGETVIPSRNVMDFVRRAYFSGTDKR 228
RN S E D K +L F P E V SR+V+ +R G +R
Sbjct: 178 SRFKRNESSCDEGDDFDAKKLDTLSPFSPKF-AGTKEKVKSSRSVVGVIRNKGLFG--RR 234
Query: 229 NFCRNDGSSTRDKAGFDTGNKAK 251
F +ND S+ D + G++ K
Sbjct: 235 KFRKNDSSTEEDSD--EEGDEGK 255
>TAIR|locus:2054688 [details] [associations]
symbol:AT2G07750 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268799 EMBL:AC004483 IPI:IPI00546939 PIR:E84488
RefSeq:NP_178818.1 UniGene:At.52694 ProteinModelPortal:O80792
SMR:O80792 PaxDb:O80792 PRIDE:O80792 EnsemblPlants:AT2G07750.1
GeneID:815422 KEGG:ath:AT2G07750 GeneFarm:994 TAIR:At2g07750
InParanoid:O80792 OMA:FRKTALK PhylomeDB:O80792
ProtClustDB:CLSN2713541 Genevestigator:O80792 GermOnline:AT2G07750
Uniprot:O80792
Length = 845
Score = 1781 (632.0 bits), Expect = 1.4e-183, P = 1.4e-183
Identities = 367/640 (57%), Positives = 455/640 (71%)
Query: 213 VMDFVRRAYFSGTD-KRNFCRNDGSSTRDKAGFDTGNKAKPFARNLGNNREN-GDSKNMS 270
V+D RR + S + KRN D D DT PF+ +E S ++
Sbjct: 213 VLDSSRRGFSSMSRFKRNESSCDEGDDVDAKKLDT---LSPFSPKFSGTKEKVKSSTSVV 269
Query: 271 EFMKKKCFVGKRRFKRNXXXXXXXXXXXXXXXXXXKVEGWRDVKKMGSSASLGKYDMKIT 330
++ K G+R+F++N K+ GW D++K GSSASLG +D+K+T
Sbjct: 270 GVIRNKGLFGRRKFRKNDSSTEEDSDEEGNEG---KMIGWMDLRKTGSSASLGNHDIKLT 326
Query: 331 KRVPLKSLEDEHDFEE-QVELIRKEISXXXXXXXXXXXXXXXXXPILSQKRFDECGISPL 389
KRV +++ DE + + +R+++S I S KRFDE ISPL
Sbjct: 327 KRVN-RNVTDEELYPPLDINRVREDLSKKQSVDNVMEEKQEPHDSIYSAKRFDESCISPL 385
Query: 390 TIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSST 449
T+KAL+A+G ++MTRVQ+ATLS CL+GKDA+VKAKTGTGKS+AFLLPAIE VLKA +S
Sbjct: 386 TLKALSASGIVKMTRVQDATLSECLDGKDALVKAKTGTGKSMAFLLPAIETVLKAMNSGK 445
Query: 450 -TQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPC 508
V PI+VLILCPTRELASQIAAE ALLKNHDGIGV TL+GGTRF++DQ+RLES+PC
Sbjct: 446 GVHKVAPIFVLILCPTRELASQIAAEGKALLKNHDGIGVQTLIGGTRFRLDQQRLESEPC 505
Query: 509 QILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQS 568
QIL+ATPGRLLDHIENKSGL+ RLM LK+ ++DEAD LLDLGF++DVE I+DCLPR+RQS
Sbjct: 506 QILIATPGRLLDHIENKSGLTSRLMALKLFIVDEADLLLDLGFKRDVEKIIDCLPRQRQS 565
Query: 569 LLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILHHLL 622
LLFSAT+PKE LVLKR+H+YIDT+GLG VET K+KQSC+VAPHE HF ++ HLL
Sbjct: 566 LLFSATIPKEVRRVSQLVLKRDHSYIDTIGLGCVETHDKVKQSCIVAPHESHFHLVPHLL 625
Query: 623 KEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEFRASKR 682
KEHI PDYK+IVFCSTGMVTSL+Y LLREMK+NVRE+++RKPQL+R +S+EF+ S R
Sbjct: 626 KEHINNMPDYKIIVFCSTGMVTSLMYTLLREMKLNVREIHARKPQLHRTCVSDEFKESNR 685
Query: 683 LILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXXXXXXXVLLLAPWEEYF 742
LILVTSDVSARGM+YPDVT V+QVGIP DREQYIH +LL+APWE YF
Sbjct: 686 LILVTSDVSARGMNYPDVTLVIQVGIPSDREQYIHRLGRTGREGKGGKGLLLIAPWERYF 745
Query: 743 XXXXXXXXXXXXXXXXXNPEIQLQMDNHMAKIDNNVKEAAYHAWLGYYNSIREIGRDKTT 802
+ ++ Q+D MAKID ++KEAAYHAWLGYYNS+RE GRDKTT
Sbjct: 746 LDELKDLPLEPIPAPDLDSRVKHQVDQSMAKIDTSIKEAAYHAWLGYYNSVRETGRDKTT 805
Query: 803 LVELANKFAQSIGLQRPPPLFRKTALKMGLKDIPGIRLRK 842
L ELAN+F SIGL++PP LFR+TA+KMGLK I GI +RK
Sbjct: 806 LAELANRFCHSIGLEKPPALFRRTAVKMGLKGISGIPIRK 845
Score = 373 (136.4 bits), Expect = 5.2e-31, P = 5.2e-31
Identities = 99/256 (38%), Positives = 129/256 (50%)
Query: 10 SKPLTN--ILWFNRVFARPMGGGPRTFPGGLNKWQWKRMHXXXXXXXXXXXXXXXXXXXX 67
SK +T+ LW NR+F+R MGGGPRTFPGGLNKWQWKRMH
Sbjct: 58 SKRITSERSLW-NRIFSRNMGGGPRTFPGGLNKWQWKRMHEKKAREKENKLLDQEKQLYE 116
Query: 68 ARVRSQIRTKLFDKADPDSET----NQHKPMSPDEHVKALADRFMKEGAEDLWNEDDGPV 123
AR+R++IR K++ D +T H PMSP EH+K LADRFMK GA+DLWN++DGPV
Sbjct: 117 ARIRTEIRAKMWGHPDSGEKTAKLKQSHGPMSPKEHIKTLADRFMKAGADDLWNDNDGPV 176
Query: 124 KS-EQRPRSGAEANQRPRLAGAPIDLRGLIS---D---KRXXXXXXXXXXXXXXXKTRNY 176
K +Q RS +++ + PID+R L+S D K RN
Sbjct: 177 KKFDQGSRSCSDS-----IDSTPIDVRRLVSATCDSMGKHRVLDSSRRGFSSMSRFKRNE 231
Query: 177 SVLSESKFSDRSKSASLI-FMPNLECNDGETVIPSRNVMDFVRRAYFSGTDKRNFCRNDG 235
S E D K +L F P E V S +V+ +R G +R F +ND
Sbjct: 232 SSCDEGDDVDAKKLDTLSPFSPKFS-GTKEKVKSSTSVVGVIRNKGLFG--RRKFRKNDS 288
Query: 236 SSTRDKAGFDTGNKAK 251
S+ D + GN+ K
Sbjct: 289 STEEDSD--EEGNEGK 302
>TAIR|locus:2159517 [details] [associations]
symbol:PDE340 "PIGMENT DEFECTIVE 340" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA;ISS] [GO:0009507 "chloroplast"
evidence=IDA] [GO:0009220 "pyrimidine ribonucleotide biosynthetic
process" evidence=RCA] InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0009507 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268799 EMBL:AB006697 EMBL:AJ010474
IPI:IPI00522710 PIR:T51747 RefSeq:NP_196478.2 UniGene:At.32551
ProteinModelPortal:Q9FNM7 SMR:Q9FNM7 STRING:Q9FNM7 PaxDb:Q9FNM7
PRIDE:Q9FNM7 EnsemblPlants:AT5G08610.1 GeneID:830762
KEGG:ath:AT5G08610 GeneFarm:949 TAIR:At5g08610 InParanoid:Q9FNM7
OMA:GRNDRNV PhylomeDB:Q9FNM7 ProtClustDB:CLSN2918084
Genevestigator:Q9FNM7 GermOnline:AT5G08610 Uniprot:Q9FNM7
Length = 850
Score = 1325 (471.5 bits), Expect = 2.9e-135, P = 2.9e-135
Identities = 303/675 (44%), Positives = 404/675 (59%)
Query: 180 SESKF---SDRSKSASLIFMPNLECN-DGETVIPSRNVMDFVRRAYFSGTDKRNFCRNDG 235
SES F SDR+ + F + N D + RN + + F G RN + G
Sbjct: 194 SESSFRGRSDRNVDSGSSFRGRSDKNVDSGSSFRGRNDRNVDSGSSFRGRSDRNV--DSG 251
Query: 236 SSTRDKA--GFDTGNKAKPFARNLGNNRENGDSKNMSEFMKKKCFVGKRRFKRNXXXXXX 293
SS R ++ D+G+ + G N N DS S F + + F+R
Sbjct: 252 SSFRGRSDRNVDSGSSFR------GRNDRNVDSG--SSFRGRNDRNVESGFRREPGSENN 303
Query: 294 XXXXXXXXXXXXKVEGWRDVKKMGSSASLGKYDMKITKRVPLKSLEDEHDFEEQVELIRK 353
+ E D + + LG D +P + DE D E LI+K
Sbjct: 304 RGLGKQTRGLSLEEEDSSDDDE--NRVGLGNID-----DLPSEDSSDEDD-ENDEPLIKK 355
Query: 354 EISXXXXXXXX-XXXXXXXXXPILSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSA 412
S LS+ RFD+ +SPL++KA+ AG+ MT VQEATL
Sbjct: 356 AASAKAVQTDKPTGEHVKTSDSYLSKTRFDQFPLSPLSLKAIKDAGFETMTVVQEATLPI 415
Query: 413 CLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIA 472
L+GKD + KAKTGTGK++AFLLPAIEAV+K+ +S PPI VL++CPTRELASQ A
Sbjct: 416 ILQGKDVLAKAKTGTGKTVAFLLPAIEAVIKSPPASRDSRQPPIIVLVVCPTRELASQAA 475
Query: 473 AEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRL 532
AEA LLK H IGV ++GGT+ +QRR++++PCQILVATPGRL DHIEN SG + RL
Sbjct: 476 AEANTLLKYHPSIGVQVVIGGTKLPTEQRRMQTNPCQILVATPGRLKDHIENTSGFATRL 535
Query: 533 MGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQSLLFSATMPKEL------VLKREHT 586
MG+K+LVLDEADHLLD+GFR+D+E I+ +P++RQ+ LFSAT+P+E+ LKR+H
Sbjct: 536 MGVKVLVLDEADHLLDMGFRRDIERIIAAVPKQRQTFLFSATVPEEVRQICHVALKRDHE 595
Query: 587 YIDTVGLGSVETPVKIKQSCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSL 646
+I+ V GS ET K+ Q ++A + HF +LH LLKEHI DYKVI+FC+T MVT L
Sbjct: 596 FINCVQEGSGETHQKVTQMYMIASLDRHFSLLHVLLKEHIADNVDYKVIIFCTTAMVTRL 655
Query: 647 LYLLLREMKMNVREMYSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQV 706
+ LL ++ +NVRE++SRKPQ YR R+S+EFR SK +ILVTSDVSARG+DYPDV+ VVQ+
Sbjct: 656 VADLLSQLSLNVREIHSRKPQSYRTRVSDEFRKSKAIILVTSDVSARGVDYPDVSLVVQM 715
Query: 707 GIPPDREQYIHXXXXXXXXXXXXXXVLLLAPWEEYFXXXXXXXXXXXXXXXXXNPEIQLQ 766
G+P DREQYIH VLLLAPWEEYF +PE +
Sbjct: 716 GLPSDREQYIHRLGRTGRKGKEGEGVLLLAPWEEYFMSSVKDLPITKSPLPPIDPEAVKR 775
Query: 767 MDNHMAKIDNNVKEAAYHAWLGYYNSIREIGRDKTTLVELANKFAQSIGLQRPPPLFRKT 826
+ +++++ KEAAY AWLGYY S + I RD T LVELAN+F++S+GL PP + +
Sbjct: 776 VQKGLSQVEMKNKEAAYQAWLGYYKSQKMIARDTTRLVELANEFSRSMGLDSPPAIPKNV 835
Query: 827 ALKMGLKDIPGIRLR 841
KMGLK++PG+R +
Sbjct: 836 LGKMGLKNVPGLRTK 850
>TAIR|locus:2159527 [details] [associations]
symbol:STRS2 "STRESS RESPONSE SUPPRESSOR 2" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA;ISS] [GO:0003723 "RNA binding" evidence=IDA]
[GO:0009409 "response to cold" evidence=IEP] [GO:0009414 "response
to water deprivation" evidence=IMP] [GO:0009651 "response to salt
stress" evidence=IMP] [GO:0042991 "transcription factor import into
nucleus" evidence=RCA] InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0009651 GO:GO:0009409 GO:GO:0009414 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268799 EMBL:AB006697 EMBL:AJ010473 EMBL:AY035114
EMBL:AY142638 IPI:IPI00534387 PIR:T51348 RefSeq:NP_196479.1
UniGene:At.47465 ProteinModelPortal:Q94C75 SMR:Q94C75 STRING:Q94C75
PRIDE:Q94C75 EnsemblPlants:AT5G08620.1 GeneID:830763
KEGG:ath:AT5G08620 GeneFarm:945 TAIR:At5g08620 InParanoid:Q94C75
OMA:RELACQA PhylomeDB:Q94C75 ProtClustDB:CLSN2687472
Genevestigator:Q94C75 GermOnline:AT5G08620 Uniprot:Q94C75
Length = 563
Score = 1245 (443.3 bits), Expect = 8.7e-127, P = 8.7e-127
Identities = 264/535 (49%), Positives = 350/535 (65%)
Query: 313 VKKMGSSAS-LGKYDMKITKRVPLKSLEDEHDFEEQVELIRKEISXXXXXXXXXXXXXXX 371
VKK+ S GK +K + + E + D +E LI+K S
Sbjct: 20 VKKLTSDEDGSGKL-VKDNNKSLKRGREGKSDVDEP--LIKKPASTTPLVTQIAKTSDSY 76
Query: 372 XXPILSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSI 431
LS+ RFD+ +SPLT+K + AG+ MT VQEATL L+GKD + KAKTGTGK++
Sbjct: 77 ----LSKTRFDQFPLSPLTLKGIEDAGFKTMTVVQEATLPLILQGKDILAKAKTGTGKTV 132
Query: 432 AFLLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLV 491
AFLLP+IEAV+KA +S PPI VL++CPTRELA Q AAEA LLK H IGV ++
Sbjct: 133 AFLLPSIEAVIKAPPASRDNRHPPIIVLVVCPTRELACQAAAEANILLKYHPSIGVQVVI 192
Query: 492 GGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGF 551
GGT+ +QRRL+ PCQILVATPGRL DHI+N SG + RLMG+K+LVLDEADHLLD+GF
Sbjct: 193 GGTKLPTEQRRLQKSPCQILVATPGRLKDHIDNTSGFATRLMGVKVLVLDEADHLLDMGF 252
Query: 552 RKDVENIVDCLPRRRQSLLFSATMPKEL------VLKREHTYIDTVGLGSVETPVKIKQS 605
R+++E I+ +P++RQ+ LFSAT+ E+ LKR+H +++ V G+ ET K+ Q
Sbjct: 253 RREIERIIAAVPKQRQTFLFSATVSDEVRQICHVALKRDHEFVNCVQEGAGETHQKVSQM 312
Query: 606 CLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRK 665
++A + HF +L+ LLK+HI YKVI+FC+T MVT L+ LL ++ +NVRE++SRK
Sbjct: 313 YMIASLDRHFSLLYGLLKKHITDNVGYKVIIFCTTAMVTRLVADLLGKLSLNVREIHSRK 372
Query: 666 PQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXX 725
PQ YR R+S+EFR SK +ILVTSDVSARG+DYPDV+ VVQ+G+P DREQYIH
Sbjct: 373 PQSYRTRVSDEFRKSKSIILVTSDVSARGVDYPDVSLVVQMGLPSDREQYIHRLGRTGRK 432
Query: 726 XXXXXXVLLLAPWEEYFXXXXXXXXXXXXXXXXXNPEIQLQMDNHMAKIDNNVKEAAYHA 785
VLLLAPWEEYF + E ++ + +++ KEAAY A
Sbjct: 433 GKEGEGVLLLAPWEEYFLSSVKDLPITKSSLPPIDHEAVKKVQKGLIQVEMTNKEAAYQA 492
Query: 786 WLGYYNSIREIGRDKTTLVELANKFAQSIGLQRPPPLFRKTALKMGLKDIPGIRL 840
WLGYY S ++I RD T LVELAN+F++S+GL PP + KMGLK++PGIR+
Sbjct: 493 WLGYYKSQKKIARDTTRLVELANEFSRSMGLSIPPAIPVNILGKMGLKNVPGIRV 547
>UNIPROTKB|Q2KEF1 [details] [associations]
symbol:MGCH7_ch7g1085 "Putative uncharacterized protein"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:CM000230
GO:GO:0008026 ProteinModelPortal:Q2KEF1 Uniprot:Q2KEF1
Length = 568
Score = 616 (221.9 bits), Expect = 3.9e-60, P = 3.9e-60
Identities = 164/474 (34%), Positives = 245/474 (51%)
Query: 386 ISPLTIKALTA-AGYIQMTRVQEATLSACLEGK-DAVVKAKTGTGKSIAFLLPAIEAVLK 443
+ P+ + +T + +M+ VQ AT+ + + D + +AKTGTGK+IAFLLPA++ +L+
Sbjct: 83 LDPVLLDTITQDLKFDRMSPVQAATIRHLIADRGDVLAQAKTGTGKTIAFLLPALQTLLR 142
Query: 444 ATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRL 503
SS + VL++ PTRELA QIA EA ALL+ V T +GGT +QRR+
Sbjct: 143 RPSSRGND----VSVLVISPTRELALQIAKEAEALLQRLPQYKVCTAIGGTNKDAEQRRI 198
Query: 504 ESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLP 563
CQIL+ TPGRL+DH+E +S ++ L + VLDEAD LLD+GF ++ IV LP
Sbjct: 199 LRG-CQILIGTPGRLMDHLEEQS-VAEMLQSVDTFVLDEADRLLDMGFMPQLKKIVAALP 256
Query: 564 RR----RQSLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHEL 613
R RQ +LFSAT+ + + L ++ +I T+ G T ++ Q + P+
Sbjct: 257 NRQKVPRQGMLFSATVAEHVAKVSSIALAPDYKFISTIPKGESNTHERVPQHLIEVPNFS 316
Query: 614 HFQI-----LHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREM-KM-NVREMYSRKP 666
L H L E ++K IVF T + +L + M + ++SR
Sbjct: 317 DTMAALVGALRHELAESA-NQDEFKAIVFAPTAALVDFYAAVLEGLPNMPRILTLHSRMT 375
Query: 667 QLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXX 726
Q R R++E++R S +LV +DV ARGMD+P VT+V QVG+P D+E YIH
Sbjct: 376 QSKRTRVTEDYRKSNATVLVATDVVARGMDFPSVTNVFQVGLPMDKESYIHRLGRTARAG 435
Query: 727 XXXXXVLLLAPWEEYFXXXXXXXXXXXXXXXXXNPEIQLQMDNHMAKIDNNVKEAAYHAW 786
+++ E YF + +++ K++ K AY +W
Sbjct: 436 AEGRGTFIVSAAESYFPRKVMKDFTFIDQPADLSALGEIK--EVAPKLEPYGK--AYQSW 491
Query: 787 LGYYNSI-REIGRDKTTLVELANKFA-QSIGLQRPPPLFRKTALKMGLKDIPGI 838
LG+Y + +G D LV ANK A + G PPL + T KMGLK + G+
Sbjct: 492 LGFYKVFTKPLGWDNEQLVREANKLALEGFGAPEVPPLNKSTVGKMGLKGVKGL 545
>ASPGD|ASPL0000028276 [details] [associations]
symbol:AN5623 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:BN001305
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268799
ProteinModelPortal:C8VFX5 EnsemblFungi:CADANIAT00003447 OMA:STIGKMG
Uniprot:C8VFX5
Length = 567
Score = 536 (193.7 bits), Expect = 1.2e-51, P = 1.2e-51
Identities = 155/470 (32%), Positives = 235/470 (50%)
Query: 391 IKALTAAGYIQMTRVQEATLSACLEGK-DAVVKAKTGTGKSIAFLLPAIEAVLKATSSST 449
++AL G+ M+ VQ+ L+ + D +V+AKTGTGK++AFLLPA+ +++ S
Sbjct: 23 LQALNVLGFEYMSPVQQRVLTELPTWRSDCLVQAKTGTGKTVAFLLPALHCLIQGQSQVR 82
Query: 450 TQLVPPIYVLILCPTRELASQIAAEAIALLKNHDG-IGVLTLVGGT-RFKVDQRRLESDP 507
V +LI+ PTRELA QIA L + VGGT R R + DP
Sbjct: 83 RGQVA---ILIITPTRELAQQIAKSCDELTSQLSRPLECHIAVGGTARASAHSRFMNGDP 139
Query: 508 CQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRR- 566
ILVATPGRL D++ ++S + +L ++ LVLDEAD +L+ GF DV+ I+ +P +
Sbjct: 140 -SILVATPGRLKDYL-SESETAEKLKDIQTLVLDEADTMLETGFLADVKQILKLIPSKST 197
Query: 567 --QSLLFSATMPKEL------VLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELH-FQI 617
Q + FSAT+P ++ VL +T I TV T ++ Q ++ P F
Sbjct: 198 GWQGMCFSATLPPKVKDVVSVVLNPGYTSISTVDKNEPPTHERVPQYYVLMPSVAETFTT 257
Query: 618 LHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLRE--MKMNVREMYSRKPQLYRDRISE 675
L LL + K+IVF T + +L + + V E++SR Q R R +
Sbjct: 258 LSSLLAHE--SKKNTKIIVFGVTANMVALSHSAFANGLTPLKVFEIHSRLSQSARTRTTS 315
Query: 676 EFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXXXXXXXVLLL 735
+F+ + IL SDV RGMD+P+V VVQVG+P + EQY+H V+LL
Sbjct: 316 QFKEADAGILFASDVIGRGMDFPNVDLVVQVGLPSNAEQYVHRVGRTARAGNDGRAVILL 375
Query: 736 APWEEYFXXXXXXXXXX---XXXXXXXNP-EIQLQMDNHMAKIDNNVKEAAYHAWLGYYN 791
E +F N + M +D K+ AY +++G++
Sbjct: 376 TESESFFLKANRHLPIQPHPDASSILANATSCSPAVTQAMYAVDETTKQRAYSSYIGFFA 435
Query: 792 S---IREIGRDKTTLVELANKFA-QSIGLQRPPPLFRKTALKMGLKDIPG 837
++++ DK LV+LAN+ A + + PPP+ +K KMGLK +PG
Sbjct: 436 GSGLMKQLRLDKPGLVQLANELAIKGMACPEPPPMDKKIVGKMGLKGVPG 485
>UNIPROTKB|G4MSR4 [details] [associations]
symbol:MGG_07099 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0043581 "mycelium development" evidence=IEP] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0043581 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:CM001232 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 RefSeq:XP_003715292.1 EnsemblFungi:MGG_07099T0
GeneID:2682984 KEGG:mgr:MGG_07099 Uniprot:G4MSR4
Length = 717
Score = 379 (138.5 bits), Expect = 8.8e-49, Sum P(3) = 8.8e-49
Identities = 100/232 (43%), Positives = 137/232 (59%)
Query: 383 ECGISPLTIKALTA-AGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAV 441
+ I IKA+T Y MT VQ TL+ L+GKD V +AKTGTGK++AFL+P I+ +
Sbjct: 81 KANIDESIIKAITVDMRYEDMTDVQSMTLAPALKGKDLVAQAKTGTGKTLAFLIPVIQKI 140
Query: 442 LKATSS--STTQLVP-------PIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVG 492
L A S ++ P I +I+ PTRELA QI EA L + + G+ V T VG
Sbjct: 141 LDADPSLKEVSRGRPRRFAQRQSIKAIIISPTRELAEQIGKEATRLCQRN-GVTVQTAVG 199
Query: 493 GTRFKVDQRRLESDPCQILVATPGRLLDHIENK-SGLSVRLMGLKMLVLDEADHLLDLGF 551
GT + RR+ + C +LV TPGRL D + ++ SG+ ++ LVLDEAD +LD+GF
Sbjct: 200 GTGKRESLRRIHMEGCHLLVGTPGRLNDLLSDELSGIDAS--NVQALVLDEADRMLDVGF 257
Query: 552 RKDVENIVDCLPRR----RQSLLFSATMPKELV-LKREHTYIDTVGLGSVET 598
++ +IVD LP R RQ+LLFSAT+PK +V L R Y+D V+T
Sbjct: 258 ENELRSIVDMLPDRQQVPRQTLLFSATLPKNVVGLAR--WYVDKQNFEFVQT 307
Score = 187 (70.9 bits), Expect = 8.8e-49, Sum P(3) = 8.8e-49
Identities = 48/150 (32%), Positives = 83/150 (55%)
Query: 582 KREHTYIDTVGLGSVETPVKIKQSCL-------VAPHELHFQILHHLLKEHILGTPDYKV 634
K+ ++ TV ++T ++ Q + + P L + ++ P +K
Sbjct: 299 KQNFEFVQTVRADEIQTHERVPQFIVPTSSFENLLPAALELMLREIRAAKNDPSQPPFKA 358
Query: 635 IVFCS-TGMVTSLLYLLLREMKMNVREM------YSRKPQLYRDRISEEFRASKRLILVT 687
IVF T MV ++ L RE+ + + ++ +++ Q R + ++ FR SK IL++
Sbjct: 359 IVFFPFTNMV-AMAGELFRELAVQIPDLPEVFHIHAQLSQNQRTKAADYFRKSKSGILIS 417
Query: 688 SDVSARGMDYPDVTSVVQVGIPPDREQYIH 717
+DV+ARGMD+P+VT V+QVG+PPD+EQYIH
Sbjct: 418 TDVTARGMDFPNVTHVIQVGLPPDQEQYIH 447
Score = 60 (26.2 bits), Expect = 8.8e-49, Sum P(3) = 8.8e-49
Identities = 13/40 (32%), Positives = 20/40 (50%)
Query: 801 TTLVELANKFAQSIGLQRPPPLFRKTALKMGLKDIPGIRL 840
T L EL + G +PP A K+GL ++PG+ +
Sbjct: 540 TLLKELTSMTKNLWGWDKPPAFSPDRAAKLGLYNVPGVNI 579
>UNIPROTKB|E2RC35 [details] [associations]
symbol:DDX10 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 KO:K14776
InterPro:IPR025313 Pfam:PF13959 GeneTree:ENSGT00550000074980
CTD:1662 OMA:ADKVIEP EMBL:AAEX03003508 RefSeq:XP_536583.2
Ensembl:ENSCAFT00000022758 GeneID:479448 KEGG:cfa:479448
Uniprot:E2RC35
Length = 871
Score = 528 (190.9 bits), Expect = 9.6e-49, P = 9.6e-49
Identities = 152/474 (32%), Positives = 240/474 (50%)
Query: 380 RFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIE 439
RF + +S T+K L A Y +T +Q+ T+ L+GKD + AKTG+GK++AFL+P +E
Sbjct: 70 RFSDFPLSKKTLKGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLE 129
Query: 440 AVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVD 499
A+ + +ST L VLI+ PTRELA Q + KNHD L ++GG K +
Sbjct: 130 ALYRLQWTSTDGLG----VLIISPTRELAYQTFEVLRKVGKNHDFSAGL-IIGGKDLKHE 184
Query: 500 QRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIV 559
R+ + ILV TPGRLL H++ + L+MLVLDEAD +LD+GF + I+
Sbjct: 185 AERINN--INILVCTPGRLLQHMDET--ICFHATNLQMLVLDEADRILDMGFADTMNAII 240
Query: 560 DCLPRRRQSLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHEL 613
+ LP++RQ+LLFSAT K L LK YI TP ++Q+ +V +
Sbjct: 241 ENLPKKRQTLLFSATQTKSVKDLARLSLKNPE-YIWVHEKAKYSTPATLEQNYIVCELQQ 299
Query: 614 HFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK--MNVREMYSRKPQLYRD 671
+L+ L+ H+ K IVF S+ LY + ++ +++ ++ R+ Q+ R
Sbjct: 300 KISVLYSFLRSHL----KKKSIVFFSSCKEVQYLYRVFCRLRPGISILALHGRQQQMRRM 355
Query: 672 RISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXXXXXXX 731
+ EF + +L +D++ARG+D+P V V+Q P D YIH
Sbjct: 356 EVYNEFVRKRSAVLFATDIAARGLDFPAVNWVLQFDCPEDANTYIHRAGRTARYKEDGEA 415
Query: 732 VLLLAPWEEYFXXXXXXXXXXXXXXXXXNPE----IQLQMDNHMAKIDNNVKEAAYHAWL 787
+L+L P EE NPE +Q ++++ +A+ D ++KE A ++
Sbjct: 416 LLILLPSEEKGMVQQLLQKKVPVKEIKINPEKLIDVQKKLESFLAQ-DKDLKERAQRCFV 474
Query: 788 GYYNSI-----REIGRDKTTLVELANKFAQSIGLQRPPPL-FRKTALKMGLKDI 835
Y S+ +EI D +TL ++A S+GL P + F + K K++
Sbjct: 475 SYIRSVYLMKNKEIF-DVSTLP--VPEYALSLGLAVAPRVRFLQKMQKQPTKEL 525
>MGI|MGI:1924841 [details] [associations]
symbol:Ddx10 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 10"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 MGI:MGI:1924841 GO:GO:0005524
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K14776 InterPro:IPR025313 Pfam:PF13959 HOGENOM:HOG000268801
GeneTree:ENSGT00550000074980 CTD:1662 HOVERGEN:HBG102756
OrthoDB:EOG4BK536 OMA:ADKVIEP ChiTaRS:DDX10 EMBL:BC049261
IPI:IPI00896604 RefSeq:NP_084212.2 UniGene:Mm.133560
ProteinModelPortal:Q80Y44 SMR:Q80Y44 STRING:Q80Y44
PhosphoSite:Q80Y44 PaxDb:Q80Y44 PRIDE:Q80Y44
Ensembl:ENSMUST00000065630 GeneID:77591 KEGG:mmu:77591
UCSC:uc009plz.2 InParanoid:Q80Y44 NextBio:347162 Bgee:Q80Y44
CleanEx:MM_DDX10 Genevestigator:Q80Y44
GermOnline:ENSMUSG00000053289 Uniprot:Q80Y44
Length = 875
Score = 524 (189.5 bits), Expect = 3.2e-48, P = 3.2e-48
Identities = 147/457 (32%), Positives = 235/457 (51%)
Query: 380 RFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIE 439
RF + +S T+K L A Y +T +Q+ T+ L+GKD + AKTG+GK++AFL+P +E
Sbjct: 70 RFSDFPLSKKTLKGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLE 129
Query: 440 AVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVD 499
A+ + +ST L VLI+ PTRELA Q + KNHD L ++GG K +
Sbjct: 130 ALYRLQWTSTDGLG----VLIISPTRELAYQTFEVLRKVGKNHDFSAGL-IIGGKDLKHE 184
Query: 500 QRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIV 559
R+ + ILV TPGRLL H++ + L+MLVLDEAD +LD+GF + I+
Sbjct: 185 AERINN--INILVCTPGRLLQHMDET--ICFHATNLQMLVLDEADRILDMGFADTMNAII 240
Query: 560 DCLPRRRQSLLFSATMPKELV-LKR----EHTYIDTVGLGSVETPVKIKQSCLVAPHELH 614
+ LP++RQ+LLFSAT K + L R + Y+ TP ++Q+ ++ ELH
Sbjct: 241 ENLPKKRQTLLFSATQTKSVKDLARLSLKDPEYVWVHEKAKYSTPATLEQNYIIC--ELH 298
Query: 615 --FQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK--MNVREMYSRKPQLYR 670
+L L+ H+ K IVF S+ LY + ++ +++ ++ R+ Q+ R
Sbjct: 299 QKISVLFSFLRSHL----KKKSIVFFSSCKEVQYLYRVFCRLRPGISILALHGRQQQMRR 354
Query: 671 DRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXXXXXX 730
+ EF + +L +D++ARG+D+P V V+Q P D YIH
Sbjct: 355 MEVYNEFVRKRAAVLFATDIAARGLDFPAVNWVLQFDCPEDANTYIHRAGRTARYKEDGE 414
Query: 731 XVLLLAPWEEYFXXXXXXXXXXXXXXXXXNPE----IQLQMDNHMAKIDNNVKEAAYHAW 786
+L+L P EE NPE +Q ++++ +A+ D ++KE A +
Sbjct: 415 ALLILLPSEEQGMVQQLLQKKVPVKEIKINPEKLIDVQKKLESFLAQ-DQDLKERAQRCF 473
Query: 787 LGYYNSIREIGRDKTT--LVELA-NKFAQSIGLQRPP 820
+ Y S+ + +DK + +L ++A S+GL P
Sbjct: 474 VSYIRSVY-LMKDKEVFNVSKLPITEYALSLGLAVAP 509
>RGD|1308990 [details] [associations]
symbol:Ddx10 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 10"
species:10116 "Rattus norvegicus" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 RGD:1308990
GO:GO:0005524 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:CH473975 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 KO:K14776 InterPro:IPR025313 Pfam:PF13959
GeneTree:ENSGT00550000074980 CTD:1662 OrthoDB:EOG4BK536 OMA:ADKVIEP
IPI:IPI00869603 RefSeq:NP_001100290.1 UniGene:Rn.99481
Ensembl:ENSRNOT00000017683 GeneID:300710 KEGG:rno:300710
UCSC:RGD:1308990 NextBio:647348 Uniprot:D3ZBY5
Length = 874
Score = 523 (189.2 bits), Expect = 4.4e-48, P = 4.4e-48
Identities = 147/457 (32%), Positives = 235/457 (51%)
Query: 380 RFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIE 439
RF + +S T+K L A Y +T +Q+ T+ L+GKD + AKTG+GK++AFL+P +E
Sbjct: 70 RFSDFPLSKKTLKGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLE 129
Query: 440 AVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVD 499
A+ + +ST L VLI+ PTRELA Q + KNHD L ++GG K +
Sbjct: 130 ALYRLQWTSTDGLG----VLIISPTRELAYQTFEVLRKVGKNHDFSAGL-IIGGKDLKHE 184
Query: 500 QRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIV 559
R+ + ILV TPGRLL H++ + L+MLVLDEAD +LD+GF + I+
Sbjct: 185 AERINN--INILVCTPGRLLQHMDET--ICFHATNLQMLVLDEADRILDMGFADTMNAII 240
Query: 560 DCLPRRRQSLLFSATMPKELV-LKR----EHTYIDTVGLGSVETPVKIKQSCLVAPHELH 614
+ LP++RQ+LLFSAT K + L R + Y+ TP ++Q+ ++ ELH
Sbjct: 241 ENLPKKRQTLLFSATQTKSVKDLARLSLKDPEYVWVHEKAKYSTPATLEQNYIIC--ELH 298
Query: 615 --FQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK--MNVREMYSRKPQLYR 670
+L L+ H+ K IVF S+ LY + ++ +++ ++ R+ Q+ R
Sbjct: 299 QKISVLFSFLRSHLTK----KSIVFFSSCKEVQYLYRVFCRLRPGISILALHGRQQQMRR 354
Query: 671 DRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXXXXXX 730
+ EF + +L +D++ARG+D+P V V+Q P D YIH
Sbjct: 355 MEVYNEFVRKRAAVLFATDIAARGLDFPAVNWVLQFDCPEDANTYIHRAGRTARYKEDGE 414
Query: 731 XVLLLAPWEEYFXXXXXXXXXXXXXXXXXNPE----IQLQMDNHMAKIDNNVKEAAYHAW 786
+L+L P EE NPE +Q ++++ +A+ D ++KE A +
Sbjct: 415 ALLILLPSEEQGMVQQLLQKKVPVKEIKINPEKLIDVQKRLESFLAQ-DQDLKERAQRCF 473
Query: 787 LGYYNSIREIGRDKTT--LVELA-NKFAQSIGLQRPP 820
+ Y S+ + +DK + +L ++A S+GL P
Sbjct: 474 VSYIRSVY-LMKDKEVFDVNKLPITEYALSLGLAVAP 509
>GENEDB_PFALCIPARUM|PF13_0037 [details] [associations]
symbol:PF13_0037 "DEAD box helicase, putative"
species:5833 "Plasmodium falciparum" [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 EMBL:AL844509
HSSP:P10081 KO:K01509 RefSeq:XP_001349800.1
ProteinModelPortal:Q8IEP2 EnsemblProtists:PF13_0037:mRNA
GeneID:814016 KEGG:pfa:PF13_0037 EuPathDB:PlasmoDB:PF3D7_1307300
HOGENOM:HOG000280785 OMA:YKIIVFF ProtClustDB:CLSZ2433434
Uniprot:Q8IEP2
Length = 630
Score = 504 (182.5 bits), Expect = 4.9e-48, P = 4.9e-48
Identities = 143/463 (30%), Positives = 227/463 (49%)
Query: 399 YIQMTRVQEATLSACLEGK---DAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLVPP 455
Y + T VQ ++ K D +++AKTGTGK+IA+LL +I ++K S
Sbjct: 170 YKEFTDVQRIVYDNIIKEKKQNDLLIQAKTGTGKTIAYLLLSINDIIKNKILS------- 222
Query: 456 IYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILVATP 515
++ LI+ PTRELA+QI E LL I VLTL GG + + DQ + I++ T
Sbjct: 223 VHTLIIVPTRELANQIYNECKLLLTYKHNINVLTLTGGIKRRDDQLNIRRIKPDIIICTV 282
Query: 516 GRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQSLLFSATM 575
GRLLDH E+ + LKML++DEAD LL G+ D+ ++ LP R+++L SAT+
Sbjct: 283 GRLLDHFESTYLFNTLFENLKMLIIDEADQLLSTGYENDIHRLLTYLPSNRRNILLSATL 342
Query: 576 PKEL------VLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILHHLLKEHI-LG 628
L + K ++ Y++ V S T ++ Q L IL++LL EH+ L
Sbjct: 343 GYNLDEIRKKMCKSDYIYLNCVKDISKHTSDQLIQYVLFHKAIDTTIILYNLLIEHMRLN 402
Query: 629 TPDYKVIVFCSTGMVTSLL-YLLLREMKMNVREMYSRKPQLYRDRISEEFRASKRLILVT 687
YK+IVF T TS + ++K++V E++ +K +R + F IL T
Sbjct: 403 QFTYKIIVFFPTARATSFYAQFFINQLKISVYEIHRKKEMAHRQITANRFSMESVGILFT 462
Query: 688 SDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXXXXXXXVLLLAPWEEYFXXXXX 747
SD+S+RG++YPD+T ++QV P REQYIH ++LL +E F
Sbjct: 463 SDISSRGLNYPDITLIIQVNTPISREQYIHRVGRTARSNKKGMAIILLNEADELFYQEIK 522
Query: 748 XXXXXXXXXXXXNPEIQLQMDNHMAKIDNNVKEAAYHAWLGYYNSIREIGRDKTT----- 802
+ + N+++ +N + Y A+ YY+SI + K T
Sbjct: 523 DLNIQKLNAQNYTLK-NTNLSNYLSTWMSNT-QLLYLAY-AYYSSILRFYKTKYTHLKIN 579
Query: 803 ---LVELANKFAQSIGLQRPPPLFRKTALKMGLKDIPGIRLRK 842
+++ N S GL P + R A + +++ +++RK
Sbjct: 580 DDEIIDAVNNMLLSTGLVEQPYISRNLATTLNMQNNVKLKIRK 622
>UNIPROTKB|Q8IEP2 [details] [associations]
symbol:PF13_0037 "DEAD box helicase, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
EMBL:AL844509 HSSP:P10081 KO:K01509 RefSeq:XP_001349800.1
ProteinModelPortal:Q8IEP2 EnsemblProtists:PF13_0037:mRNA
GeneID:814016 KEGG:pfa:PF13_0037 EuPathDB:PlasmoDB:PF3D7_1307300
HOGENOM:HOG000280785 OMA:YKIIVFF ProtClustDB:CLSZ2433434
Uniprot:Q8IEP2
Length = 630
Score = 504 (182.5 bits), Expect = 4.9e-48, P = 4.9e-48
Identities = 143/463 (30%), Positives = 227/463 (49%)
Query: 399 YIQMTRVQEATLSACLEGK---DAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLVPP 455
Y + T VQ ++ K D +++AKTGTGK+IA+LL +I ++K S
Sbjct: 170 YKEFTDVQRIVYDNIIKEKKQNDLLIQAKTGTGKTIAYLLLSINDIIKNKILS------- 222
Query: 456 IYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILVATP 515
++ LI+ PTRELA+QI E LL I VLTL GG + + DQ + I++ T
Sbjct: 223 VHTLIIVPTRELANQIYNECKLLLTYKHNINVLTLTGGIKRRDDQLNIRRIKPDIIICTV 282
Query: 516 GRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQSLLFSATM 575
GRLLDH E+ + LKML++DEAD LL G+ D+ ++ LP R+++L SAT+
Sbjct: 283 GRLLDHFESTYLFNTLFENLKMLIIDEADQLLSTGYENDIHRLLTYLPSNRRNILLSATL 342
Query: 576 PKEL------VLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILHHLLKEHI-LG 628
L + K ++ Y++ V S T ++ Q L IL++LL EH+ L
Sbjct: 343 GYNLDEIRKKMCKSDYIYLNCVKDISKHTSDQLIQYVLFHKAIDTTIILYNLLIEHMRLN 402
Query: 629 TPDYKVIVFCSTGMVTSLL-YLLLREMKMNVREMYSRKPQLYRDRISEEFRASKRLILVT 687
YK+IVF T TS + ++K++V E++ +K +R + F IL T
Sbjct: 403 QFTYKIIVFFPTARATSFYAQFFINQLKISVYEIHRKKEMAHRQITANRFSMESVGILFT 462
Query: 688 SDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXXXXXXXVLLLAPWEEYFXXXXX 747
SD+S+RG++YPD+T ++QV P REQYIH ++LL +E F
Sbjct: 463 SDISSRGLNYPDITLIIQVNTPISREQYIHRVGRTARSNKKGMAIILLNEADELFYQEIK 522
Query: 748 XXXXXXXXXXXXNPEIQLQMDNHMAKIDNNVKEAAYHAWLGYYNSIREIGRDKTT----- 802
+ + N+++ +N + Y A+ YY+SI + K T
Sbjct: 523 DLNIQKLNAQNYTLK-NTNLSNYLSTWMSNT-QLLYLAY-AYYSSILRFYKTKYTHLKIN 579
Query: 803 ---LVELANKFAQSIGLQRPPPLFRKTALKMGLKDIPGIRLRK 842
+++ N S GL P + R A + +++ +++RK
Sbjct: 580 DDEIIDAVNNMLLSTGLVEQPYISRNLATTLNMQNNVKLKIRK 622
>UNIPROTKB|Q08DT0 [details] [associations]
symbol:DDX10 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K14776
InterPro:IPR025313 Pfam:PF13959 HOGENOM:HOG000268801
GeneTree:ENSGT00550000074980 CTD:1662 HOVERGEN:HBG102756
OrthoDB:EOG4BK536 OMA:ADKVIEP EMBL:DAAA02040206 EMBL:DAAA02040207
EMBL:DAAA02040208 EMBL:DAAA02040209 EMBL:DAAA02040210
EMBL:DAAA02040211 EMBL:DAAA02040212 EMBL:DAAA02040213
EMBL:DAAA02040214 EMBL:DAAA02040215 EMBL:DAAA02040216
EMBL:DAAA02040217 EMBL:BC123579 IPI:IPI00717487
RefSeq:NP_001070349.1 UniGene:Bt.63620 SMR:Q08DT0
Ensembl:ENSBTAT00000003086 GeneID:528483 KEGG:bta:528483
InParanoid:Q08DT0 NextBio:20874836 Uniprot:Q08DT0
Length = 876
Score = 521 (188.5 bits), Expect = 7.9e-48, P = 7.9e-48
Identities = 149/472 (31%), Positives = 237/472 (50%)
Query: 380 RFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIE 439
RF + +S T+K L A Y +T +Q+ T+ L+GKD + AKTG+GK++AFL+P +E
Sbjct: 70 RFSDFPLSKKTLKGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLE 129
Query: 440 AVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVD 499
A+ + +S L VLI+ PTRELA Q + KNHD L ++GG K +
Sbjct: 130 ALYRLQWTSADGLG----VLIISPTRELAYQTFEVLRKVGKNHDFSAGL-IIGGKDLKHE 184
Query: 500 QRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIV 559
R+ + ILV TPGRLL H++ + L+MLVLDEAD +LD+GF + I+
Sbjct: 185 AERINN--INILVCTPGRLLQHMDET--ICFHATNLQMLVLDEADRILDMGFADTMNAII 240
Query: 560 DCLPRRRQSLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHEL 613
+ LP++RQ+LLFSAT K L LK Y+ TP ++Q+ +V +
Sbjct: 241 ENLPKKRQTLLFSATQTKSVKDLARLSLKNPE-YVWVHEKAKYSTPATLEQNYIVCELQQ 299
Query: 614 HFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVR--EMYSRKPQLYRD 671
+L+ L+ H+ K IVF S+ LY + ++ V ++ R+ Q+ R
Sbjct: 300 KISVLYSFLRSHL----KKKSIVFFSSCKEVQYLYRVFCRLRPGVSLLALHGRQQQMRRM 355
Query: 672 RISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXXXXXXX 731
+ EF + +L +D++ARG+D+P V V+Q P D YIH
Sbjct: 356 EVYNEFVRKRAAVLFATDIAARGLDFPAVNWVLQFDCPEDANTYIHRAGRTARYKEDGEA 415
Query: 732 VLLLAPWEEYFXXXXXXXXXXXXXXXXXNPE----IQLQMDNHMAKIDNNVKEAAYHAWL 787
+L+L P EE NPE +Q ++++ +A+ D ++KE A ++
Sbjct: 416 LLILLPSEEKGMVQQLLQKKVPVKEIKINPEKLIDVQKKLESFLAQ-DQDLKERAQRCFI 474
Query: 788 GYYNSIREIGRDKTT--LVELA-NKFAQSIGLQRPPPL-FRKTALKMGLKDI 835
Y S+ + +DK + +L + +A S+GL P + F + K K++
Sbjct: 475 SYIRSVY-LMKDKEIFDVSKLPISDYALSLGLAVAPRIRFLQRMQKQPSKEL 525
>UNIPROTKB|E9PIF2 [details] [associations]
symbol:DDX10 "Probable ATP-dependent RNA helicase DDX10"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313
Pfam:PF13959 HGNC:HGNC:2735 ChiTaRS:DDX10 EMBL:AP002453
EMBL:AP003027 EMBL:AP003387 IPI:IPI00982941
ProteinModelPortal:E9PIF2 SMR:E9PIF2 Ensembl:ENST00000526794
UCSC:uc001pkl.1 ArrayExpress:E9PIF2 Bgee:E9PIF2 Uniprot:E9PIF2
Length = 835
Score = 518 (187.4 bits), Expect = 1.4e-47, P = 1.4e-47
Identities = 148/472 (31%), Positives = 241/472 (51%)
Query: 380 RFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIE 439
RF + +S T+K L A Y +T +Q+ T+ L+GKD + AKTG+GK++AFL+P +E
Sbjct: 70 RFSDFPLSKKTLKGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLE 129
Query: 440 AVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVD 499
A+ + +ST L VLI+ PTRELA Q + KNHD L ++GG K +
Sbjct: 130 ALYRLQWTSTDGLG----VLIISPTRELAYQTFEVLRKVGKNHDFSAGL-IIGGKDLKHE 184
Query: 500 QRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIV 559
R+ + ILV TPGRLL H++ +S L+MLVLDEAD +LD+GF + ++
Sbjct: 185 AERINN--INILVCTPGRLLQHMDET--VSFHATDLQMLVLDEADRILDMGFADTMNAVI 240
Query: 560 DCLPRRRQSLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHEL 613
+ LP++RQ+LLFSAT K L LK Y+ TP ++Q+ +V +
Sbjct: 241 ENLPKKRQTLLFSATQTKSVKDLARLSLKNPE-YVWVHEKAKYSTPATLEQNYIVCELQQ 299
Query: 614 HFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK--MNVREMYSRKPQLYRD 671
+L+ L+ H+ K IVF S+ LY + ++ +++ ++ R+ Q+ R
Sbjct: 300 KISVLYSFLRSHL----KKKSIVFFSSCKEVQYLYRVFCRLRPGVSILALHGRQQQMRRM 355
Query: 672 RISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXXXXXXX 731
+ EF + +L +D++ARG+D+P V V+Q P D YIH
Sbjct: 356 EVYNEFVRKRAAVLFATDIAARGLDFPAVNWVLQFDCPEDANTYIHRAGRTARYKEDGEA 415
Query: 732 VLLLAPWEEYFXXXXXXXXXXXXXXXXXNPE----IQLQMDNHMAKIDNNVKEAAYHAWL 787
+L+L P E+ NPE +Q ++++ +A+ D ++KE A ++
Sbjct: 416 LLILLPSEKAMVQQLLQKKVPVKEIKI-NPEKLIDVQKKLESILAQ-DQDLKERAQRCFV 473
Query: 788 GYYNSIREIGRDKTT--LVELA-NKFAQSIGLQRPPPL-FRKTALKMGLKDI 835
Y S+ + +DK + +L ++A S+GL P + F + K K++
Sbjct: 474 SYVRSVY-LMKDKEVFDVSKLPIPEYALSLGLAVAPRVRFLQKMQKQPTKEL 524
>UNIPROTKB|Q13206 [details] [associations]
symbol:DDX10 "Probable ATP-dependent RNA helicase DDX10"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003724 "RNA helicase
activity" evidence=TAS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:CH471065
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014
PROSITE:PS51195 KO:K14776 InterPro:IPR025313 Pfam:PF13959
HOGENOM:HOG000268801 CTD:1662 HOVERGEN:HBG102756 OrthoDB:EOG4BK536
EMBL:U28042 EMBL:AB040537 EMBL:AK315216 EMBL:BC091521 EMBL:BC093654
EMBL:BC093656 IPI:IPI00297900 RefSeq:NP_004389.2 UniGene:Hs.591931
PDB:2PL3 PDBsum:2PL3 ProteinModelPortal:Q13206 SMR:Q13206
IntAct:Q13206 STRING:Q13206 PhosphoSite:Q13206 DMDM:76803554
SWISS-2DPAGE:Q13206 PaxDb:Q13206 PeptideAtlas:Q13206 PRIDE:Q13206
Ensembl:ENST00000322536 GeneID:1662 KEGG:hsa:1662 UCSC:uc001pkm.3
GeneCards:GC11P108569 HGNC:HGNC:2735 HPA:HPA004691 MIM:601235
neXtProt:NX_Q13206 PharmGKB:PA27200 InParanoid:Q13206 OMA:ADKVIEP
ChiTaRS:DDX10 EvolutionaryTrace:Q13206 GenomeRNAi:1662 NextBio:6838
ArrayExpress:Q13206 Bgee:Q13206 CleanEx:HS_DDX10
Genevestigator:Q13206 GermOnline:ENSG00000178105 Uniprot:Q13206
Length = 875
Score = 518 (187.4 bits), Expect = 1.9e-47, P = 1.9e-47
Identities = 148/472 (31%), Positives = 241/472 (51%)
Query: 380 RFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIE 439
RF + +S T+K L A Y +T +Q+ T+ L+GKD + AKTG+GK++AFL+P +E
Sbjct: 70 RFSDFPLSKKTLKGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLE 129
Query: 440 AVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVD 499
A+ + +ST L VLI+ PTRELA Q + KNHD L ++GG K +
Sbjct: 130 ALYRLQWTSTDGLG----VLIISPTRELAYQTFEVLRKVGKNHDFSAGL-IIGGKDLKHE 184
Query: 500 QRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIV 559
R+ + ILV TPGRLL H++ +S L+MLVLDEAD +LD+GF + ++
Sbjct: 185 AERINN--INILVCTPGRLLQHMDET--VSFHATDLQMLVLDEADRILDMGFADTMNAVI 240
Query: 560 DCLPRRRQSLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHEL 613
+ LP++RQ+LLFSAT K L LK Y+ TP ++Q+ +V +
Sbjct: 241 ENLPKKRQTLLFSATQTKSVKDLARLSLKNPE-YVWVHEKAKYSTPATLEQNYIVCELQQ 299
Query: 614 HFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK--MNVREMYSRKPQLYRD 671
+L+ L+ H+ K IVF S+ LY + ++ +++ ++ R+ Q+ R
Sbjct: 300 KISVLYSFLRSHL----KKKSIVFFSSCKEVQYLYRVFCRLRPGVSILALHGRQQQMRRM 355
Query: 672 RISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXXXXXXX 731
+ EF + +L +D++ARG+D+P V V+Q P D YIH
Sbjct: 356 EVYNEFVRKRAAVLFATDIAARGLDFPAVNWVLQFDCPEDANTYIHRAGRTARYKEDGEA 415
Query: 732 VLLLAPWEEYFXXXXXXXXXXXXXXXXXNPE----IQLQMDNHMAKIDNNVKEAAYHAWL 787
+L+L P E+ NPE +Q ++++ +A+ D ++KE A ++
Sbjct: 416 LLILLPSEKAMVQQLLQKKVPVKEIKI-NPEKLIDVQKKLESILAQ-DQDLKERAQRCFV 473
Query: 788 GYYNSIREIGRDKTT--LVELA-NKFAQSIGLQRPPPL-FRKTALKMGLKDI 835
Y S+ + +DK + +L ++A S+GL P + F + K K++
Sbjct: 474 SYVRSVY-LMKDKEVFDVSKLPIPEYALSLGLAVAPRVRFLQKMQKQPTKEL 524
>POMBASE|SPAC1093.05 [details] [associations]
symbol:SPAC1093.05 "ATP-dependent RNA helicase Hca4
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006364 "rRNA processing" evidence=ISO]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 PomBase:SPAC1093.05 GO:GO:0005829 GO:GO:0005524
EMBL:CU329670 GO:GO:0005730 GenomeReviews:CU329670_GR GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K14776 InterPro:IPR025313 Pfam:PF13959 HOGENOM:HOG000268801
OMA:MFERKNQ OrthoDB:EOG4R53B0 PIR:T50068 RefSeq:NP_594652.1
ProteinModelPortal:Q9UTP9 SMR:Q9UTP9 STRING:Q9UTP9
EnsemblFungi:SPAC1093.05.1 GeneID:2541630 KEGG:spo:SPAC1093.05
NextBio:20802723 Uniprot:Q9UTP9
Length = 735
Score = 506 (183.2 bits), Expect = 1.4e-46, P = 1.4e-46
Identities = 143/455 (31%), Positives = 229/455 (50%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F E ++ T AL A +I +T +Q+ + + L+G+D + AKTG+GK++AF++P IE
Sbjct: 41 FAELPLTQPTKSALKNAHFITLTEIQKQCIPSALKGRDILGAAKTGSGKTLAFIVPLIEN 100
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+ + +S L L++ PTRELA Q + + + H L ++GG +K ++
Sbjct: 101 LYRKKWTSLDGLG----ALVISPTRELAIQTFETLVKIGRLHSFSAGL-IIGGNNYKEEK 155
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
RL ILV TPGRLL HI+ ++ GL+ML+LDEAD +LD+GFR ++ IV
Sbjct: 156 ERLSR--MNILVCTPGRLLQHIDQ--AVNFDTSGLQMLILDEADRILDMGFRTTLDAIVS 211
Query: 561 CLPRRRQSLLFSATMPKELV-LKR----EHTYIDTVGLGSVETPVKIKQSCLVAPHELHF 615
LP RQ++LFSAT K + L R +I + TP + Q L P
Sbjct: 212 SLPVHRQTMLFSATQTKSVKDLARLSLQNPDFISVHENDTSSTPSNLNQFYLTVPLTEKL 271
Query: 616 QILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK--MNVREMYSRKPQLYRDRI 673
IL ++ H+ +K IVF S+ +Y R M+ +++ ++ ++ Q R +
Sbjct: 272 DILFGFIRTHL----KFKTIVFLSSCKQVRFVYETFRRMRPGISLLHLHGKQKQTTRTEV 327
Query: 674 SEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXXXXXXXVL 733
+ +F +S+ ++L +D+ ARG+D+P V V+Q+ P D + YIH +L
Sbjct: 328 TAKFTSSRHVVLFCTDIVARGLDFPAVDWVIQLDAPEDVDTYIHRVGRTARYNRSGNALL 387
Query: 734 LLAPWEEYFXXXXXXXXXXXXXXXXXNPE---IQLQMDNHMAKIDNNVKEAAYHAWLGYY 790
LL P EE F + + I+ Q+ N K DN++K A++ Y
Sbjct: 388 LLLPSEEAFLKRLESKKIAVERINVKDGKKTSIRNQLQNLCFK-DNDIKYIGQKAFISYL 446
Query: 791 NSIREIGRDKTT--LVEL-ANKFAQSIGLQRPPPL 822
SI + +DK L +L FA S+GL P +
Sbjct: 447 RSIY-LQKDKDVFQLDKLPVEAFADSLGLPGTPKI 480
>DICTYBASE|DDB_G0282741 [details] [associations]
symbol:ddx18 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 dictyBase:DDB_G0282741 GO:GO:0005524
GO:GO:0005730 EMBL:AAFI02000047 GenomeReviews:CM000152_GR
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HSSP:Q58083 InterPro:IPR025313 Pfam:PF13959
RefSeq:XP_640236.1 ProteinModelPortal:Q54S03 STRING:Q54S03
EnsemblProtists:DDB0234194 GeneID:8623775 KEGG:ddi:DDB_G0282741
KO:K13179 OMA:KDGYRSY Uniprot:Q54S03
Length = 602
Score = 487 (176.5 bits), Expect = 4.4e-46, P = 4.4e-46
Identities = 120/344 (34%), Positives = 192/344 (55%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F I T K++ G+ +MT +Q ++ LEGKD + A+TG+GK++AFL+PAIE
Sbjct: 121 FSNLPIEENTKKSIEEMGFKKMTPIQAKSILPLLEGKDLLGAARTGSGKTLAFLIPAIEV 180
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGI-GVLTLVGGTRFKVD 499
++K+ V+I+ PTRELA QI A L+K H G++ +GG K +
Sbjct: 181 LVKSNFKPRNGTG----VIIISPTRELALQIYGVARELMKYHTQTHGIV--IGGASKKPE 234
Query: 500 QRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIV 559
+ RLE +LVATPGRLLDH++N G + LK L++DEAD +L++GF +++ I+
Sbjct: 235 EERLEKG-VNLLVATPGRLLDHLQNTKGFITK--NLKCLIIDEADRILEVGFEEEMHQII 291
Query: 560 DCLPRRRQSLLFSATMPKEL------VLKREHTYIDTVGLGSVETPVKIKQSCLVAPHEL 613
+P+ RQ++LFSAT +++ L Y+ + T ++Q +V P E
Sbjct: 292 KKVPKTRQTMLFSATQTRKVDDIAKVSLNNSPVYVGVDDEREISTVEGLEQGYVVCPSER 351
Query: 614 HFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRI 673
F +L+ LK+++ K+IVF S+ LL + + V E++ R+ Q R
Sbjct: 352 RFLLLYTFLKKNL----SKKIIVFLSSCNAVKYTAELLNYIDIPVLELHGRQKQQKRTNT 407
Query: 674 SEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 717
EF +++ IL+ +DV+ARG+D P V ++Q P D ++YIH
Sbjct: 408 FYEFVNAEKGILICTDVAARGLDIPSVDWIIQYDPPDDPKEYIH 451
>ZFIN|ZDB-GENE-030131-9685 [details] [associations]
symbol:ddx18 "DEAD (Asp-Glu-Ala-Asp) box
polypeptide 18" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0030099 "myeloid
cell differentiation" evidence=IMP] [GO:0030097 "hemopoiesis"
evidence=IMP] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 ZFIN:ZDB-GENE-030131-9685
GO:GO:0005524 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0030099 InterPro:IPR014014
PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959 KO:K13179 CTD:8886
HOVERGEN:HBG105702 EMBL:AY648748 IPI:IPI00492099
RefSeq:NP_001003411.1 UniGene:Dr.24235 ProteinModelPortal:Q6DRL1
STRING:Q6DRL1 PRIDE:Q6DRL1 GeneID:321127 KEGG:dre:321127
InParanoid:Q6DRL1 NextBio:20807243 ArrayExpress:Q6DRL1 Bgee:Q6DRL1
Uniprot:Q6DRL1
Length = 653
Score = 487 (176.5 bits), Expect = 4.4e-46, P = 4.4e-46
Identities = 140/450 (31%), Positives = 231/450 (51%)
Query: 386 ISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKAT 445
+S T+K + G+ MT +Q T+ LEG+D + AKTG+GK++AFL+P+IE + K
Sbjct: 168 VSENTLKGVKEMGFDTMTEIQHKTIRPLLEGRDVLAAAKTGSGKTLAFLIPSIELIYKLK 227
Query: 446 SSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLES 505
V++L PTRELA Q L+ +H L ++GG+ + ++L +
Sbjct: 228 FMPRNGTG----VIVLSPTRELAMQTYGVLKELMTHHVHTYGL-IMGGSNRSAEAQKL-A 281
Query: 506 DPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRR 565
+ ILVATPGRLLDH++N G + L+ L++DEAD +L++GF ++++ I+ LP++
Sbjct: 282 NGVNILVATPGRLLDHLQNTPGFMFK--NLQCLIIDEADRILEVGFEEELKQIIKLLPKK 339
Query: 566 RQSLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILH 619
RQS+LFSAT ++ + LK+E Y+ T ++Q +V P E F +L
Sbjct: 340 RQSMLFSATQTRKVEDLARISLKKEPLYVGVDDNKDTATVEGLEQGYVVCPSEKRFLLLF 399
Query: 620 HLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEFRA 679
LK++ K++VF S+ M Y LL + + V ++ ++ Q R +F
Sbjct: 400 TFLKKN----RKKKLMVFFSSCMSVKFHYELLNYIDLPVMAIHGKQKQTKRTTTFFQFCN 455
Query: 680 SKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXXXXXXXVLLLAPWE 739
+ IL+ +DV+ARG+D P+V +VQ P D ++YIH LL+ E
Sbjct: 456 ADSGILLCTDVAARGLDIPEVDWIVQFDPPDDPKEYIHRVGRTARGINGRGHALLILRPE 515
Query: 740 EY----FXXXXXXXXXXXXXXXXXNPEIQLQMDNHMAK---IDNNVKEAAYHAWLGYYNS 792
E F +IQ Q+D + K + + +EA Y +++ Y+S
Sbjct: 516 ELGFLRFLKQAKVPLSEFEFSWTKISDIQSQLDKLIEKNYYLHKSAQEA-YKSYVRAYDS 574
Query: 793 --IREIGRDKTTLVELANKFAQSIGLQRPP 820
+++I +T ++L K A S G + PP
Sbjct: 575 HSLKQIYNVET--LDLP-KVAMSFGFKVPP 601
>DICTYBASE|DDB_G0284017 [details] [associations]
symbol:ddx10 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 dictyBase:DDB_G0284017 GO:GO:0005524
GO:GO:0005730 GenomeReviews:CM000153_GR GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
EMBL:AAFI02000059 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K14776 InterPro:IPR025313 Pfam:PF13959
HSSP:P26196 RefSeq:XP_638786.1 ProteinModelPortal:Q54Q94
STRING:Q54Q94 PRIDE:Q54Q94 EnsemblProtists:DDB0234197
GeneID:8624375 KEGG:ddi:DDB_G0284017 OMA:AMNILIA Uniprot:Q54Q94
Length = 878
Score = 503 (182.1 bits), Expect = 4.6e-46, Sum P(2) = 4.6e-46
Identities = 149/461 (32%), Positives = 230/461 (49%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F + IS LT+KALT + ++++T +Q A+L L G+D + AKTG+GK+++F+LP +E
Sbjct: 143 FKDLPISQLTLKALTESKFLKLTDIQRASLPHTLCGRDILGAAKTGSGKTLSFILPILET 202
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+ + I ++L PTRELA QI A+ K H L ++GG V Q
Sbjct: 203 LWRNRWGRDDG----IGAIVLSPTRELAIQIFDVLKAVGKYHTFSAGL-IIGGRN--VQQ 255
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
+ + + IL+ATPGRLL H++ G LK+LVLDEAD +LDLGF K + +IV+
Sbjct: 256 EKDKINAMNILIATPGRLLQHMDETYGFDCS--NLKILVLDEADRILDLGFSKCLNSIVE 313
Query: 561 CLPRRRQSLLFSATMPKELV-LKR----EHTYIDTVGLGSVETPVKIKQSCLVAPHELHF 615
LPR RQ+LLFSAT K + L R E YI TP + Q+ V P E+
Sbjct: 314 NLPRERQTLLFSATQTKSIRDLARLSLQEPEYISVYEKDITTTPQNLTQTLCVIPLEMKL 373
Query: 616 QILHHLLKEHILGTPDYKVIVF---CSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDR 672
+L +K H+ K+IVF C + LL + ++ + Q R
Sbjct: 374 NMLFSFIKTHLTS----KIIVFFASCKQVRFAHETFKLLNP-GTTLFPLHGKMKQWTRLE 428
Query: 673 ISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXXXXXXXV 732
+ E+F K L +D++ARG+D+P V V+QV P D E YIH +
Sbjct: 429 VFEDFCKKKAGTLFATDIAARGLDFPAVEWVIQVDCPDDIETYIHRVGRTARNDAPGQSI 488
Query: 733 LLLAPWEEYFXXXXXXXXXXXXXXXXXNPEIQLQMDNHMAKI---DNNVKEAAYHAWLGY 789
+L P E+ NPE + +D+ ++ ++K A +++ Y
Sbjct: 489 TILLPSEKDGMVNLMEKQKMKFEILEPNPEKLVSIDSKLSSFLSEKTDLKYLAQKSFVSY 548
Query: 790 YNSI-REIGRDKTTLVEL-ANKFAQSIGLQRPPPL-FRKTA 827
S+ R+ ++ + EL N+F++S+GL P + F K +
Sbjct: 549 LRSVYRQSNKEIFKIQELNINEFSKSLGLLGTPNIQFGKAS 589
Score = 45 (20.9 bits), Expect = 4.6e-46, Sum P(2) = 4.6e-46
Identities = 12/42 (28%), Positives = 21/42 (50%)
Query: 248 NKAKPFAR--NLGNNRENGDSKNMSEFMKKKCFVGKRRFKRN 287
+K KP + N NN+ N ++ N +E K K +F ++
Sbjct: 6 SKQKPQKKENNNNNNKNNNNNNNKTENNKTNKDFTKNKFDKD 47
>UNIPROTKB|Q81QF0 [details] [associations]
symbol:BAS2301 "ATP-dependent RNA helicase, DEAD/DEAH box
family" species:1392 "Bacillus anthracis" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HSSP:Q58083 HOGENOM:HOG000268807 RefSeq:NP_844851.1
RefSeq:YP_019115.1 RefSeq:YP_028562.1 ProteinModelPortal:Q81QF0
DNASU:1085525 EnsemblBacteria:EBBACT00000011128
EnsemblBacteria:EBBACT00000014583 EnsemblBacteria:EBBACT00000019769
GeneID:1085525 GeneID:2816610 GeneID:2853183 KEGG:ban:BA_2475
KEGG:bar:GBAA_2475 KEGG:bat:BAS2301 OMA:DNKGRPG
ProtClustDB:CLSK916648 BioCyc:BANT260799:GJAJ-2367-MONOMER
BioCyc:BANT261594:GJ7F-2455-MONOMER Uniprot:Q81QF0
Length = 450
Score = 486 (176.1 bits), Expect = 5.7e-46, P = 5.7e-46
Identities = 128/343 (37%), Positives = 183/343 (53%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
K F E GIS L G + T +QE + L GKD + +AKTGTGK++AF+LP +
Sbjct: 5 KNFLELGISETFNHTLRENGITEATPIQEKAIPVILSGKDIIGQAKTGTGKTLAFVLPIL 64
Query: 439 EAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
E + SS Q LI+ PTRELA QI E +L + I VL + GG
Sbjct: 65 EKI--DPESSDVQ------ALIVAPTRELALQITTEIKKMLVQREDINVLAIYGGQDVAQ 116
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
R+L+ + I+VATPGRLLDHI ++ + L L +VLDEAD +L GF D+E+I
Sbjct: 117 QLRKLKGNT-HIVVATPGRLLDHIRRET---IDLSNLSTIVLDEADQMLYFGFLYDIEDI 172
Query: 559 VDCLPRRRQSLLFSATMPKELVLKREHTYIDT---VGLGSVETPVK-IKQSCLVAPHELH 614
+D P +Q++LFSAT+PK+ + K Y+D + + S E V I+Q +
Sbjct: 173 LDETPGSKQTMLFSATIPKD-IKKLAKRYMDEPQMIQVQSEEVTVDTIEQRVIETTDRAK 231
Query: 615 FQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRIS 674
L ++ P + ++FC T + S LY L+ + N E++ PQ R+R+
Sbjct: 232 PDALRFVMDRD---QP-FLAVIFCRTKVRASKLYDNLKGLGYNCAELHGDIPQAKRERVM 287
Query: 675 EEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 717
+ FR +K L+ +DV+ARG+D VT V IP D E YIH
Sbjct: 288 KSFREAKIQYLIATDVAARGLDVDGVTHVFNYDIPEDVESYIH 330
>TIGR_CMR|BA_2475 [details] [associations]
symbol:BA_2475 "ATP-dependent RNA helicase, DEAD/DEAH box
family" species:198094 "Bacillus anthracis str. Ames" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HSSP:Q58083 HOGENOM:HOG000268807 RefSeq:NP_844851.1
RefSeq:YP_019115.1 RefSeq:YP_028562.1 ProteinModelPortal:Q81QF0
DNASU:1085525 EnsemblBacteria:EBBACT00000011128
EnsemblBacteria:EBBACT00000014583 EnsemblBacteria:EBBACT00000019769
GeneID:1085525 GeneID:2816610 GeneID:2853183 KEGG:ban:BA_2475
KEGG:bar:GBAA_2475 KEGG:bat:BAS2301 OMA:DNKGRPG
ProtClustDB:CLSK916648 BioCyc:BANT260799:GJAJ-2367-MONOMER
BioCyc:BANT261594:GJ7F-2455-MONOMER Uniprot:Q81QF0
Length = 450
Score = 486 (176.1 bits), Expect = 5.7e-46, P = 5.7e-46
Identities = 128/343 (37%), Positives = 183/343 (53%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
K F E GIS L G + T +QE + L GKD + +AKTGTGK++AF+LP +
Sbjct: 5 KNFLELGISETFNHTLRENGITEATPIQEKAIPVILSGKDIIGQAKTGTGKTLAFVLPIL 64
Query: 439 EAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
E + SS Q LI+ PTRELA QI E +L + I VL + GG
Sbjct: 65 EKI--DPESSDVQ------ALIVAPTRELALQITTEIKKMLVQREDINVLAIYGGQDVAQ 116
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
R+L+ + I+VATPGRLLDHI ++ + L L +VLDEAD +L GF D+E+I
Sbjct: 117 QLRKLKGNT-HIVVATPGRLLDHIRRET---IDLSNLSTIVLDEADQMLYFGFLYDIEDI 172
Query: 559 VDCLPRRRQSLLFSATMPKELVLKREHTYIDT---VGLGSVETPVK-IKQSCLVAPHELH 614
+D P +Q++LFSAT+PK+ + K Y+D + + S E V I+Q +
Sbjct: 173 LDETPGSKQTMLFSATIPKD-IKKLAKRYMDEPQMIQVQSEEVTVDTIEQRVIETTDRAK 231
Query: 615 FQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRIS 674
L ++ P + ++FC T + S LY L+ + N E++ PQ R+R+
Sbjct: 232 PDALRFVMDRD---QP-FLAVIFCRTKVRASKLYDNLKGLGYNCAELHGDIPQAKRERVM 287
Query: 675 EEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 717
+ FR +K L+ +DV+ARG+D VT V IP D E YIH
Sbjct: 288 KSFREAKIQYLIATDVAARGLDVDGVTHVFNYDIPEDVESYIH 330
>SGD|S000003570 [details] [associations]
symbol:HCA4 "DEAD box RNA helicase" species:4932
"Saccharomyces cerevisiae" [GO:0005730 "nucleolus" evidence=IEA;IC]
[GO:0006364 "rRNA processing" evidence=IEA;IMP] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008186 "RNA-dependent ATPase activity" evidence=IDA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0042254
"ribosome biogenesis" evidence=IEA] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=IDA;IMP] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 SGD:S000003570
GO:GO:0005524 GO:GO:0005730 EMBL:BK006943 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K14776 InterPro:IPR025313 Pfam:PF13959 HOGENOM:HOG000268801
OMA:MFERKNQ OrthoDB:EOG4R53B0 EMBL:U72149 EMBL:Z49308 EMBL:AY693118
PIR:S56805 RefSeq:NP_012501.1 ProteinModelPortal:P20448 SMR:P20448
DIP:DIP-6819N IntAct:P20448 MINT:MINT-620511 STRING:P20448
PaxDb:P20448 PeptideAtlas:P20448 EnsemblFungi:YJL033W GeneID:853419
KEGG:sce:YJL033W CYGD:YJL033w GeneTree:ENSGT00550000074980
NextBio:973942 Genevestigator:P20448 GermOnline:YJL033W
Uniprot:P20448
Length = 770
Score = 497 (180.0 bits), Expect = 3.1e-45, P = 3.1e-45
Identities = 156/488 (31%), Positives = 239/488 (48%)
Query: 375 ILSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFL 434
I K F + IS T+K L + +I++T +Q ++ L+G D + AKTG+GK++AFL
Sbjct: 37 ITKAKFFKDLPISDPTLKGLRESSFIKLTEIQADSIPVSLQGHDVLAAAKTGSGKTLAFL 96
Query: 435 LPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGT 494
+P IE + + T+ + LI+ PTRELA QI E + + +H ++GG
Sbjct: 97 VPVIEKLYR---EKWTEF-DGLGALIISPTRELAMQIY-EVLTKIGSHTSFSAGLVIGGK 151
Query: 495 RFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKD 554
K + R+ IL+ TPGR+L H++ GL+ L+MLVLDEAD LD+GF+K
Sbjct: 152 DVKFELERISR--INILIGTPGRILQHLDQAVGLNTS--NLQMLVLDEADRCLDMGFKKT 207
Query: 555 VENIVDCLPRRRQSLLFSATMPKELV-LKR-EHTYIDTVGL-----GSVE----TPVKIK 603
++ IV L RQ+LLFSAT + + L R T TVG GSV TP ++
Sbjct: 208 LDAIVSTLSPSRQTLLFSATQSQSVADLARLSLTDYKTVGTHDVMDGSVNKEASTPETLQ 267
Query: 604 QSCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK--MNVREM 661
Q + P IL +K H+ K+IVF S+ +Y R+M+ +++ +
Sbjct: 268 QFYIEVPLADKLDILFSFIKSHL----KCKMIVFLSSSKQVHFVYETFRKMQPGISLMHL 323
Query: 662 YSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXX 721
+ R+ Q R ++F ++++ L +DV ARG+D+P V VVQV P D + YIH
Sbjct: 324 HGRQKQRARTETLDKFNRAQQVCLFATDVVARGIDFPAVDWVVQVDCPEDVDTYIHRVGR 383
Query: 722 XXXXXXXXXXVLLLAPWE-EYFXXXXXXXXXX---XXXXXXXNPEIQLQMDNHMAKIDNN 777
+++L P E E F I+ Q+ + + K D
Sbjct: 384 CARYGKKGKSLIMLTPQEQEAFLKRLNARKIEPGKLNIKQSKKKSIKPQLQSLLFK-DPE 442
Query: 778 VKEAAYHAWLGYYNSIREIGRDKTTLV--EL-ANKFAQSIGLQRPPPLFRKTALKMGLKD 834
+K A++ Y SI + +DK EL +FA S+GL P K +K G+K
Sbjct: 443 LKYLGQKAFISYVRSIY-VQKDKQVFKFDELPTEEFAYSLGLPGAP----KIKMK-GMKT 496
Query: 835 IPGIRLRK 842
I + RK
Sbjct: 497 IEQAKERK 504
>ASPGD|ASPL0000061778 [details] [associations]
symbol:AN0589 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
EMBL:BN001308 EMBL:AACD01000007 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K14776
InterPro:IPR025313 Pfam:PF13959 RefSeq:XP_658193.1
ProteinModelPortal:Q5BFU1 SMR:Q5BFU1 STRING:Q5BFU1
EnsemblFungi:CADANIAT00002085 GeneID:2876356 KEGG:ani:AN0589.2
HOGENOM:HOG000268801 OMA:MFERKNQ OrthoDB:EOG4R53B0 Uniprot:Q5BFU1
Length = 812
Score = 492 (178.3 bits), Expect = 1.7e-44, P = 1.7e-44
Identities = 147/454 (32%), Positives = 224/454 (49%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F + IS T+ LT++ + +T +Q +S L+G+D + AKTG+GK++AFL+P +E
Sbjct: 50 FSDLPISEPTLSGLTSSHFKTLTDIQSRAISHALKGRDVLGAAKTGSGKTLAFLVPILEN 109
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+ + S L LI+ PTRELA QI E + + + ++GG K +Q
Sbjct: 110 LYRKQWSDHDGLG----ALIISPTRELAIQIF-EVLRKIGRYHTFSAGLVIGGKSLKEEQ 164
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
RL ILV TPGR+L H++ + L+MLVLDEAD ++D+GF+K V+ I+
Sbjct: 165 ERLGR--MNILVCTPGRMLQHLDQTAFFET--YNLQMLVLDEADRIMDMGFQKTVDAIIG 220
Query: 561 CLPRRRQSLLFSATMPKELV-LKR----EHTYIDTVGLGSVETPVKIKQSCLVAPHELHF 615
LP RQ+LLFSAT K++ L R + Y+ S TP K++Q +V P
Sbjct: 221 HLPPERQTLLFSATQTKKVSDLARLSLQDPEYVAVHEAASSATPSKLQQHYVVTPLPQKL 280
Query: 616 QILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVR--EMYSRKPQLYRDRI 673
L ++ ++ K IVF S+G +Y R M+ + ++ R+ Q R I
Sbjct: 281 DTLWSFIRSNLKS----KTIVFMSSGKQVRFVYESFRHMQPGIPLLHLHGRQKQGGRLDI 336
Query: 674 SEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXXXXXXXVL 733
+ F ++ +L ++DV+ARG+D+P V V+Q+ P D + YIH VL
Sbjct: 337 TTRFSQAQHAVLFSTDVAARGLDFPAVDWVIQLDCPEDADTYIHRVGRTARYERDGRAVL 396
Query: 734 LLAPWEE--YFXXXXXXXXXXXXXXXXXNPE--IQLQMDNHMAKIDNNVKEAAYHAWLGY 789
L P EE N + I+ Q+ N K D +K A++ Y
Sbjct: 397 FLDPSEEKGMLRRLEQKRVTVERINVRANKQQSIKNQLQNMCFK-DPELKYLGQKAFISY 455
Query: 790 YNSIREIGRDKTT--LVELA-NKFAQSIGLQRPP 820
S+ I +DK T L EL + FA S+GL P
Sbjct: 456 VKSVY-IQKDKETFNLKELKLDDFAASLGLPGAP 488
>UNIPROTKB|F1P0I3 [details] [associations]
symbol:DDX10 "Probable ATP-dependent RNA helicase DDX10"
species:9031 "Gallus gallus" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313
Pfam:PF13959 GeneTree:ENSGT00550000074980 IPI:IPI00595697
OMA:ADKVIEP EMBL:AADN02005060 Ensembl:ENSGALT00000027709
Uniprot:F1P0I3
Length = 875
Score = 493 (178.6 bits), Expect = 1.9e-44, P = 1.9e-44
Identities = 141/471 (29%), Positives = 234/471 (49%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
+RF + +S T+K L A Y +T +Q T+ L+GKD + AKTG+GK++AF++PA+
Sbjct: 73 QRFSDFPLSKKTLKGLQEAQYRMVTEIQRQTIGLALQGKDVLGAAKTGSGKTLAFIVPAL 132
Query: 439 EAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
E + + +S L VLI+ PTRELA Q + KNHD L ++GG K
Sbjct: 133 ELLYRLQWTSADGLG----VLIISPTRELAFQTFKVLRKVGKNHDFSAGL-IIGGKDLKE 187
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
+ R+ +L+ TPGRLL H++ S L+ML+LDEAD +LD+GF + I
Sbjct: 188 ESERIHH--INMLICTPGRLLQHMDETSYFYAS--DLQMLILDEADRILDMGFADTMNAI 243
Query: 559 VDCLPRRRQSLLFSATMPKELV-LKR----EHTYIDTVGLGSVETPVKIKQSCLVAPHEL 613
++ LP++RQ+LLFSAT K + L R + Y+ TP + Q+ +V +
Sbjct: 244 IENLPKKRQTLLFSATQTKSVKDLARLSLKDPEYVWVHEKAKFSTPATLDQNYIVCELQH 303
Query: 614 HFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK--MNVREMYSRKPQLYRD 671
+L+ L+ H+ K IVF ++ L+ + +++ + V ++ ++ Q+ R
Sbjct: 304 KINVLYSFLRSHL----KKKSIVFFASCKEVQYLFRVFCKLQPGLPVLALHGKQQQMKRM 359
Query: 672 RISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXXXXXXX 731
+ F K +L +D++ARG+D+P V V+Q P D YIH
Sbjct: 360 EVYTCFVRKKAAVLFATDIAARGLDFPAVNWVIQFDCPEDANTYIHRVGRTARYKEGGEA 419
Query: 732 VLLLAPWEEYFXXXXXXXXXXXXXXXXXNPE----IQLQMDNHMAKIDNNVKEAAYHAWL 787
+L+L P EE NPE IQ +M +A+ D +KE A ++
Sbjct: 420 LLVLLPSEEKGMVEQLAQRKVPVNEIKINPEKITDIQKRMQAFLAQ-DQELKEKAQRCFV 478
Query: 788 GYYNSIREI-GRDKTTLVELA-NKFAQSIGLQRPPPL--FRKTALKMGLKD 834
Y S+ + ++ + +L ++A S+GL P + +K ++ +K+
Sbjct: 479 SYLRSVYLMKNKEVFDVFKLPLAEYALSLGLAMAPRVRFLQKVQKQLSVKE 529
>UNIPROTKB|Q5ZJF6 [details] [associations]
symbol:DDX10 "Probable ATP-dependent RNA helicase DDX10"
species:9031 "Gallus gallus" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K14776 InterPro:IPR025313 Pfam:PF13959 HOGENOM:HOG000268801
EMBL:AJ720478 IPI:IPI00595697 RefSeq:NP_001073193.1
UniGene:Gga.15096 HSSP:P26196 ProteinModelPortal:Q5ZJF6 SMR:Q5ZJF6
STRING:Q5ZJF6 GeneID:418965 KEGG:gga:418965 CTD:1662
HOVERGEN:HBG102756 InParanoid:Q5ZJF6 OrthoDB:EOG4BK536
NextBio:20822084 Uniprot:Q5ZJF6
Length = 875
Score = 493 (178.6 bits), Expect = 1.9e-44, P = 1.9e-44
Identities = 141/471 (29%), Positives = 234/471 (49%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
+RF + +S T+K L A Y +T +Q T+ L+GKD + AKTG+GK++AF++PA+
Sbjct: 73 QRFSDFPLSKKTLKGLQEAQYRMVTEIQRQTIGLALQGKDVLGAAKTGSGKTLAFIVPAL 132
Query: 439 EAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
E + + +S L VLI+ PTRELA Q + KNHD L ++GG K
Sbjct: 133 ELLYRLQWTSADGLG----VLIISPTRELAFQTFKVLRKVGKNHDFSAGL-IIGGKDLKE 187
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
+ R+ +L+ TPGRLL H++ S L+ML+LDEAD +LD+GF + I
Sbjct: 188 ESERIHH--INMLICTPGRLLQHMDETSYFYAS--DLQMLILDEADRILDMGFADTMNAI 243
Query: 559 VDCLPRRRQSLLFSATMPKELV-LKR----EHTYIDTVGLGSVETPVKIKQSCLVAPHEL 613
++ LP++RQ+LLFSAT K + L R + Y+ TP + Q+ +V +
Sbjct: 244 IENLPKKRQTLLFSATQTKSVKDLARLSLKDPEYVWVHEKAKFSTPATLDQNYIVCELQH 303
Query: 614 HFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK--MNVREMYSRKPQLYRD 671
+L+ L+ H+ K IVF ++ L+ + +++ + V ++ ++ Q+ R
Sbjct: 304 KINVLYSFLRSHL----KKKSIVFFASCKEVQYLFRVFCKLQPGLPVLALHGKQQQMKRM 359
Query: 672 RISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXXXXXXX 731
+ F K +L +D++ARG+D+P V V+Q P D YIH
Sbjct: 360 EVYTCFVRKKAAVLFATDIAARGLDFPAVNWVIQFDCPEDANTYIHRVGRTARYKEGGEA 419
Query: 732 VLLLAPWEEYFXXXXXXXXXXXXXXXXXNPE----IQLQMDNHMAKIDNNVKEAAYHAWL 787
+L+L P EE NPE IQ +M +A+ D +KE A ++
Sbjct: 420 LLVLLPSEEKGMVEQLAQRKVPVNEIKINPEKITDIQKRMQAFLAQ-DQELKEKAQRCFV 478
Query: 788 GYYNSIREI-GRDKTTLVELA-NKFAQSIGLQRPPPL--FRKTALKMGLKD 834
Y S+ + ++ + +L ++A S+GL P + +K ++ +K+
Sbjct: 479 SYLRSVYLMKNKEVFDVFKLPLAEYALSLGLAMAPRVRFLQKVQKQLSVKE 529
>WB|WBGene00012059 [details] [associations]
symbol:T26G10.1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0040010 "positive regulation of
growth rate" evidence=IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040035 "hermaphrodite genitalia
development" evidence=IMP] [GO:0006915 "apoptotic process"
evidence=IMP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0009792 GO:GO:0040007 GO:GO:0040010 GO:GO:0006915
GO:GO:0002119 GO:GO:0010171 GO:GO:0003723 GO:GO:0040035
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268802 GeneTree:ENSGT00670000098028 KO:K14777
OMA:IFIPSKF EMBL:Z29115 PIR:S40731 RefSeq:NP_499069.1
ProteinModelPortal:P34580 SMR:P34580 STRING:P34580 PaxDb:P34580
EnsemblMetazoa:T26G10.1 GeneID:176321 KEGG:cel:CELE_T26G10.1
UCSC:T26G10.1 CTD:176321 WormBase:T26G10.1 InParanoid:P34580
NextBio:892086 Uniprot:P34580
Length = 489
Score = 470 (170.5 bits), Expect = 3.6e-44, P = 3.6e-44
Identities = 119/348 (34%), Positives = 191/348 (54%)
Query: 376 LSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLL 435
+ +K F E G+S A G+++ +++Q+A L L+GKD + A+TG+GK+ AF +
Sbjct: 41 VKEKSFAELGVSQPLCDACQRLGWMKPSKIQQAALPHALQGKDVIGLAETGSGKTGAFAI 100
Query: 436 PAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLT--LVGG 493
P ++++L + + L+L PTRELA QI + AL GIG++ +VGG
Sbjct: 101 PVLQSLLDHPQA--------FFCLVLTPTRELAFQIGQQFEAL---GSGIGLIAAVIVGG 149
Query: 494 TRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRK 553
L P I+VATPGRL+DH+EN G +++ LK L++DEAD +L++ F
Sbjct: 150 VDMAAQAMALARRP-HIIVATPGRLVDHLENTKGFNLK--ALKFLIMDEADRILNMDFEV 206
Query: 554 DVENIVDCLPRRRQSLLFSATMPKELVLKREHTYIDTVGLGSVETPVK----IKQSCLVA 609
+++ I+ +PR R++ LFSATM K+ V K E + SV + K +KQ +
Sbjct: 207 ELDKILKVIPRERRTYLFSATMTKK-VSKLERASLRDPARVSVSSRYKTVDNLKQHYIFV 265
Query: 610 PHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLY 669
P++ L +LL EH G IVFC+T T + ++LR++ M ++ + Q
Sbjct: 266 PNKYKETYLVYLLNEHA-GN---SAIVFCATCATTMQIAVMLRQLGMQAVPLHGQMSQEK 321
Query: 670 RDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 717
R +F++ R ILV +DV+ARG+D P V V+ +P + Y+H
Sbjct: 322 RLGSLNKFKSKAREILVCTDVAARGLDIPHVDMVINYDMPSQSKDYVH 369
>UNIPROTKB|F1N533 [details] [associations]
symbol:DDX18 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959
GeneTree:ENSGT00680000100037 EMBL:DAAA02005160 IPI:IPI00904747
Ensembl:ENSBTAT00000045489 OMA:TENKGES Uniprot:F1N533
Length = 670
Score = 463 (168.0 bits), Expect = 4.3e-44, Sum P(2) = 4.3e-44
Identities = 122/357 (34%), Positives = 193/357 (54%)
Query: 390 TIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSST 449
T+KA+ G+ MT +Q ++ LEG+D + AKTG+GK++AFL+PA+E ++K
Sbjct: 190 TLKAIKEMGFTNMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPAVELIVKLKFMPR 249
Query: 450 TQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQ 509
VLIL PTRELA Q L+ +H L ++GG+ + ++L ++
Sbjct: 250 NGTG----VLILSPTRELAMQTFGVLKELMTHHVHTYGL-IMGGSNRSAEAQKL-ANGIN 303
Query: 510 ILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQSL 569
I+VATPGRLLDH++N G + L+ LV+DEAD +LD+GF ++++ I+ LP RRQ++
Sbjct: 304 IVVATPGRLLDHMQNTPGFMYK--NLQCLVIDEADRILDVGFEEELKQIIKLLPTRRQTM 361
Query: 570 LFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILHHLLK 623
LFSAT ++ + LK+E Y+ + T ++Q +V P E F +L LK
Sbjct: 362 LFSATQTRKVEDLARISLKKEPLYVGVDDDKANATVDGLEQGYVVCPSEKRFLLLFTFLK 421
Query: 624 EHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEFRASKRL 683
++ K++VF S+ Y LL + + V ++ R+ Q R +F +
Sbjct: 422 KN----RKKKLMVFFSSCKSVKYHYELLNYIDLPVLAIHGRQKQNKRTTTFFQFCNADSG 477
Query: 684 ILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXXXXXXXVLLLAPWEE 740
IL+ +DV+ARG+D P+V +VQ P D ++YIH LL+ EE
Sbjct: 478 ILLCTDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTARGLNGRGHALLILRPEE 534
Score = 59 (25.8 bits), Expect = 4.3e-44, Sum P(2) = 4.3e-44
Identities = 18/74 (24%), Positives = 30/74 (40%)
Query: 84 PDSETNQHKPMSPDEHVKALADRFMKEGAEDLWNEDDG---PVKSEQRPRSGAEANQRPR 140
P+SE+ + K + V K AED+ +DG P ++E R + +
Sbjct: 103 PNSESKKKKKKKKRKVVDDAGPDSKKAKAEDIGEAEDGAQAPEETENRVEKPDDEGEDSE 162
Query: 141 LAGAPIDLRGLISD 154
+ P+ L G D
Sbjct: 163 VPSLPLGLTGAFED 176
>POMBASE|SPAC1F7.02c [details] [associations]
symbol:has1 "ATP-dependent RNA helicase Has1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=ISO] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0006364 "rRNA processing" evidence=ISO]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 PomBase:SPAC1F7.02c GO:GO:0005524 EMBL:CU329670
GO:GO:0005730 GenomeReviews:CU329670_GR GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
InterPro:IPR025313 Pfam:PF13959 HOGENOM:HOG000268799 KO:K13179
OMA:KDGYRSY OrthoDB:EOG4ZKNVS PIR:S62574 RefSeq:NP_594488.1
ProteinModelPortal:Q09916 STRING:Q09916 EnsemblFungi:SPAC1F7.02c.1
GeneID:2541668 KEGG:spo:SPAC1F7.02c NextBio:20802761 Uniprot:Q09916
Length = 578
Score = 452 (164.2 bits), Expect = 4.7e-44, Sum P(2) = 4.7e-44
Identities = 156/524 (29%), Positives = 248/524 (47%)
Query: 324 KYDMKITKRVPLKSLEDEHDFEEQ---------VELIRKEISXXXXXXXXXXXXXXXXXP 374
K D KI + +P ED+++ EE+ VE +E+
Sbjct: 27 KNDKKIAEELPQD--EDDYEQEEENEDADQNTSVESESEELDNENEDERVQKSVNLNASS 84
Query: 375 ILSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFL 434
++F + +S KA+ G+ MT +Q+ ++ L G+D + AKTG+GK++AFL
Sbjct: 85 TSDIEKFSDLQLSENIQKAIKEMGFETMTEIQKRSIPPLLAGRDVLGAAKTGSGKTLAFL 144
Query: 435 LPAIEAV--LKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLK-NHDGIGVLTLV 491
+P IE + LK + T V+I+ PTRELA QI A LLK +H G++ +
Sbjct: 145 IPTIEMLYALKFKPRNGTG------VIIISPTRELALQIFGVAKELLKYHHQTFGIV--I 196
Query: 492 GGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGF 551
GG + + +L +LVATPGRLLDH++N G R L+ LV+DEAD +L++GF
Sbjct: 197 GGANRRAEADKLVKG-VNLLVATPGRLLDHLQNTKGFVFR--NLRSLVIDEADRILEIGF 253
Query: 552 RKDVENIVDCLP-RRRQSLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVK-IK 603
++ I+ LP RQ+LLFSAT + + LK Y++ V G + V+ ++
Sbjct: 254 EDEMRQIMKILPSENRQTLLFSATQTTKVEDLARISLKPGPLYVN-VDSGKPTSTVEGLE 312
Query: 604 QSCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYS 663
Q +V + F +L LK ++ KVIVF S+ + LL + + V +++
Sbjct: 313 QGYVVVDSDKRFLLLFSFLKRNL----KKKVIVFMSSCASVKYMAELLNYIDLPVLDLHG 368
Query: 664 RKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXX 723
++ Q R EF +++ IL+ ++V+ARG+D P V +VQ P D YIH
Sbjct: 369 KQKQQRRTNTFFEFCNAEKGILLCTNVAARGLDIPAVDWIVQYDPPDDPRDYIHRVGRTA 428
Query: 724 XXXXXXXXVLL-LAPWEEYFXXXXXXXXXXXXXXXX-XNP--EIQLQMDNHMAK---IDN 776
L+ LAP E F N +Q Q++ ++K +
Sbjct: 429 RGTKGTGKSLMFLAPSELGFLRYLKTAKVSLNEFEFPANKVANVQSQLEKLVSKNYYLQQ 488
Query: 777 NVKEAAYHAWLGYYNSIREIGRDKTTLVELANKFAQSIGLQRPP 820
+ K+ Y ++L Y S ++LA K A+S G PP
Sbjct: 489 SAKDG-YRSYLQAYASYSLKSIFDINKLDLA-KVAKSFGFAHPP 530
Score = 40 (19.1 bits), Expect = 4.7e-44, Sum P(2) = 4.7e-44
Identities = 11/67 (16%), Positives = 33/67 (49%)
Query: 71 RSQIRTKLFDKADPDSETNQHKPMSPDEHVKALADRFMKEGAEDLWNEDDGPVKSEQRPR 130
+S+++ K + + + + KP+ D K +A+ ++ ED + +++ ++Q
Sbjct: 3 KSELKRKKHQSGNEEVKEKRQKPLKND---KKIAEELPQD--EDDYEQEEENEDADQNTS 57
Query: 131 SGAEANQ 137
+E+ +
Sbjct: 58 VESESEE 64
>UNIPROTKB|F1MSX0 [details] [associations]
symbol:F1MSX0 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959
OMA:KDGYRSY GeneTree:ENSGT00680000100037 EMBL:DAAA02009745
IPI:IPI00903923 Ensembl:ENSBTAT00000039166 Uniprot:F1MSX0
Length = 674
Score = 463 (168.0 bits), Expect = 5.1e-44, Sum P(2) = 5.1e-44
Identities = 122/357 (34%), Positives = 193/357 (54%)
Query: 390 TIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSST 449
T+KA+ G+ MT +Q ++ LEG+D + AKTG+GK++AFL+PA+E ++K
Sbjct: 194 TLKAIKEMGFTNMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPAVELIVKLKFMPR 253
Query: 450 TQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQ 509
VLIL PTRELA Q L+ +H L ++GG+ + ++L ++
Sbjct: 254 NGTG----VLILSPTRELAMQTFGVLKELMTHHVHTYGL-IMGGSNRSAEAQKL-ANGIN 307
Query: 510 ILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQSL 569
I+VATPGRLLDH++N G + L+ LV+DEAD +LD+GF ++++ I+ LP RRQ++
Sbjct: 308 IVVATPGRLLDHMQNTPGFMYK--NLQCLVIDEADRILDVGFEEELKQIIKLLPTRRQTM 365
Query: 570 LFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILHHLLK 623
LFSAT ++ + LK+E Y+ + T ++Q +V P E F +L LK
Sbjct: 366 LFSATQTRKVEDLARISLKKEPLYVGVDDDKANATVDGLEQGYVVCPSEKRFLLLFTFLK 425
Query: 624 EHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEFRASKRL 683
++ K++VF S+ Y LL + + V ++ R+ Q R +F +
Sbjct: 426 KN----RKKKLMVFFSSCKSVKYHYELLNYIDLPVLAIHGRQKQNKRTTTFFQFCNADSG 481
Query: 684 ILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXXXXXXXVLLLAPWEE 740
IL+ +DV+ARG+D P+V +VQ P D ++YIH LL+ EE
Sbjct: 482 ILLCTDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTARGLNGRGHALLILRPEE 538
Score = 59 (25.8 bits), Expect = 5.1e-44, Sum P(2) = 5.1e-44
Identities = 18/74 (24%), Positives = 30/74 (40%)
Query: 84 PDSETNQHKPMSPDEHVKALADRFMKEGAEDLWNEDDG---PVKSEQRPRSGAEANQRPR 140
P+SE+ + K + V K AED+ +DG P ++E R + +
Sbjct: 107 PNSESKKKKKKKKRKVVDDAGPDSKKAKAEDIGEAEDGAQAPEETENRVEKPDDEGEDSE 166
Query: 141 LAGAPIDLRGLISD 154
+ P+ L G D
Sbjct: 167 VPSLPLGLTGAFED 180
>UNIPROTKB|F1NEQ3 [details] [associations]
symbol:DDX18 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005730 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959
OMA:KDGYRSY GeneTree:ENSGT00680000100037 EMBL:AADN02016926
IPI:IPI00598837 Ensembl:ENSGALT00000019841 Uniprot:F1NEQ3
Length = 659
Score = 472 (171.2 bits), Expect = 1.6e-43, Sum P(2) = 1.6e-43
Identities = 138/452 (30%), Positives = 232/452 (51%)
Query: 386 ISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKAT 445
+S T+K ++ G+ MT +Q ++ LEG+D + AKTG+GK++AFL+PA+E + K
Sbjct: 173 VSENTLKGISDMGFTHMTEIQHKSIKPLLEGRDILAAAKTGSGKTLAFLIPAVELIYKLK 232
Query: 446 SSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLES 505
V+IL PTRELA Q L+ +H L ++GG+ + ++L
Sbjct: 233 FMPRNGTG----VIILSPTRELAMQTYGVLKELMNHHVHTYGL-IMGGSNRSAEAQKL-G 286
Query: 506 DPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRR 565
+ I+VATPGRLLDH++N G + L+ LV+DEAD +L++GF ++++ I+ LP+R
Sbjct: 287 NGINIIVATPGRLLDHMQNTPGFMYK--NLQCLVIDEADRILEVGFEEEMKQIIKLLPKR 344
Query: 566 RQSLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILH 619
RQ++LFSAT ++ + LK+E Y+ T ++Q +V P E F +L
Sbjct: 345 RQTMLFSATQTRKVEDLAKISLKKEPLYVGVDDNKETATVDGLEQGYVVCPSEKRFLLLF 404
Query: 620 HLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEFRA 679
LK++ K++VF S+ M Y LL + + V ++ ++ Q R +F
Sbjct: 405 TFLKKN----RKKKLMVFFSSCMSVKYHYELLNYIDLPVLAIHGKQKQTKRTTTFFQFCN 460
Query: 680 SKRLILVTSDVSARGMDYPDVTSVVQVGIP--PDREQYIHXXXXXXXXXXXXXXVLLLAP 737
++ IL+ +DV+ARG+D P+V +VQ P P +++YIH LL+
Sbjct: 461 AESGILLCTDVAARGLDIPEVDWIVQYDPPDDPKQKEYIHRVGRTARGINGRGHALLILR 520
Query: 738 WEEY----FXXXXXXXXXXXXXXXXXNPEIQLQMDNHMAK---IDNNVKEAAYHAWLGYY 790
EE + +IQ Q++ + K + + +EA Y A++ Y
Sbjct: 521 PEELGFLRYLKQARVPLSEFEFSWSKISDIQSQLEKLIEKNYFLHKSAQEA-YKAYIRAY 579
Query: 791 NS--IREIGRDKTTLVELANKFAQSIGLQRPP 820
+S +++I ++L NK + S G + PP
Sbjct: 580 DSHSLKQIYNVGN--LDL-NKVSLSFGFKVPP 608
Score = 37 (18.1 bits), Expect = 1.6e-43, Sum P(2) = 1.6e-43
Identities = 11/35 (31%), Positives = 17/35 (48%)
Query: 93 PMSPDEHVKALADRFMKEGAEDLWNEDDGPVKSEQ 127
P E KA A+ + AED +D G ++E+
Sbjct: 112 PEGGTETKKAKAEEDVSVEAEDEDGQDTGEKEAEE 146
>TAIR|locus:2086909 [details] [associations]
symbol:AT3G18600 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005829 "cytosol" evidence=RCA]
[GO:0001510 "RNA methylation" evidence=RCA] [GO:0009220 "pyrimidine
ribonucleotide biosynthetic process" evidence=RCA] [GO:0009909
"regulation of flower development" evidence=RCA] [GO:0034968
"histone lysine methylation" evidence=RCA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0005730 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
EMBL:AP001303 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
InterPro:IPR025313 Pfam:PF13959 HOGENOM:HOG000268799 KO:K13179
OMA:KDGYRSY EMBL:AY070052 EMBL:AY096431 IPI:IPI00544206
RefSeq:NP_188490.1 UniGene:At.28418 ProteinModelPortal:Q9LIH9
SMR:Q9LIH9 STRING:Q9LIH9 PaxDb:Q9LIH9 PRIDE:Q9LIH9 DNASU:821391
EnsemblPlants:AT3G18600.1 GeneID:821391 KEGG:ath:AT3G18600
GeneFarm:1030 TAIR:At3g18600 InParanoid:Q9LIH9 PhylomeDB:Q9LIH9
ProtClustDB:CLSN2914752 Genevestigator:Q9LIH9 GermOnline:AT3G18600
Uniprot:Q9LIH9
Length = 568
Score = 458 (166.3 bits), Expect = 7.8e-43, P = 7.8e-43
Identities = 142/456 (31%), Positives = 227/456 (49%)
Query: 375 ILSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFL 434
I++ FD +S T A+ G+ MT++Q ++ LEGKD + A+TG+GK++AFL
Sbjct: 85 IMTNVTFDSLDLSEQTSIAIKEMGFQYMTQIQAGSIQPLLEGKDVLGAARTGSGKTLAFL 144
Query: 435 LPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGT 494
+PA+E + K S V+++CPTRELA Q A LLK+H V ++GG
Sbjct: 145 IPAVELLFKERFSPRNGTG----VIVICPTRELAIQTKNVAEELLKHHSQT-VSMVIGGN 199
Query: 495 RFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKD 554
+ + +R+ S +++ATPGRLLDH++N + LK LV+DEAD +L+ F +D
Sbjct: 200 NRRSEAQRIASGS-NLVIATPGRLLDHLQNTKAFIYK--HLKCLVIDEADRILEENFEED 256
Query: 555 VENIVDCLPRRRQSLLFSATMP---KEL----VLKREHTYIDTVGLGSVETPVKIKQSCL 607
+ I+ LP+ RQ+ LFSAT K+L + H +D G V T ++Q
Sbjct: 257 MNKILKILPKTRQTALFSATQTSKVKDLARVSLTSPVHVDVDD-GRRKV-TNEGLEQGYC 314
Query: 608 VAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQ 667
V P + +L LK+++ + K++VF ST +++ ++V +++ Q
Sbjct: 315 VVPSKQRLILLISFLKKNL----NKKIMVFFSTCKSVQFHTEIMKISDVDVSDIHGGMDQ 370
Query: 668 LYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDRE-QYIHXXXXXXXXX 726
R + +F +K+ IL+ +DV+ARG+D P V ++Q PPD+ +YIH
Sbjct: 371 NRRTKTFFDFMKAKKGILLCTDVAARGLDIPSVDWIIQYD-PPDKPTEYIHRVGRTARGE 429
Query: 727 XXXXXVLL-LAPWEEYFXXXXXXXXXXXXXXXXXNPE---IQLQMDNHMAKIDNNVKEA- 781
LL L P E F +Q ++ +AK N K A
Sbjct: 430 GAKGKALLVLIPEELQFIRYLKAAKVPVKELEFNEKRLSNVQSALEKCVAKDYNLNKLAK 489
Query: 782 -AYHAWLGYYNS--IREIGR-DKTTLVELANKFAQS 813
AY A+L YNS +++I + L+ +A F S
Sbjct: 490 DAYRAYLSAYNSHSLKDIFNVHRLDLLAVAESFCFS 525
>MGI|MGI:1914192 [details] [associations]
symbol:Ddx18 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 18"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005730 "nucleolus"
evidence=ISO] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:1914192
GO:GO:0005524 GO:GO:0005730 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959
HOGENOM:HOG000268799 KO:K13179 OMA:KDGYRSY
GeneTree:ENSGT00680000100037 CTD:8886 HOVERGEN:HBG105702
OrthoDB:EOG4894MF EMBL:AK075864 EMBL:AK019845 EMBL:BC028246
EMBL:BC103776 IPI:IPI00459381 RefSeq:NP_080136.2 UniGene:Mm.44219
ProteinModelPortal:Q8K363 SMR:Q8K363 STRING:Q8K363
PhosphoSite:Q8K363 PaxDb:Q8K363 PRIDE:Q8K363
Ensembl:ENSMUST00000001724 GeneID:66942 KEGG:mmu:66942
InParanoid:Q8K363 NextBio:323084 Bgee:Q8K363 CleanEx:MM_DDX18
Genevestigator:Q8K363 GermOnline:ENSMUSG00000001674 Uniprot:Q8K363
Length = 660
Score = 468 (169.8 bits), Expect = 1.5e-42, P = 1.5e-42
Identities = 125/357 (35%), Positives = 189/357 (52%)
Query: 390 TIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSST 449
T+KA+ G+ +MT +Q ++ LEG+D + AKTG+GK++AFL+P IE ++K
Sbjct: 180 TLKAIEEMGFKRMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPVIELIVKLKFMPR 239
Query: 450 TQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQ 509
VLIL PTRELA Q L+ +H L + G R Q+ L
Sbjct: 240 NGTG----VLILSPTRELAMQTFGVLKELMTHHVHTYGLIMGGSNRSAEVQKLLNG--IN 293
Query: 510 ILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQSL 569
I+VATPGRLLDH++N G + L+ LV+DEAD +LD+GF ++++ I+ LP RRQ++
Sbjct: 294 IIVATPGRLLDHMQNTPGFMYK--NLQCLVIDEADRILDVGFEEELKQIIKLLPARRQTM 351
Query: 570 LFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILHHLLK 623
LFSAT ++ + LK+E Y+ V T ++Q +V P E F +L LK
Sbjct: 352 LFSATQTRKVEDLARISLKKEPLYVGVDDDKEVATVDGLEQGYVVCPSEKRFLLLFTFLK 411
Query: 624 EHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEFRASKRL 683
++ KV+VF S+ M Y LL + + V ++ ++ Q R +F +
Sbjct: 412 KN----RKKKVMVFFSSCMSVKYHYELLNYIDLPVLAIHGKQKQNKRTTTFFQFCNADSG 467
Query: 684 ILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXXXXXXXVLLLAPWEE 740
IL+ +DV+ARG+D P+V +VQ P D ++YIH LL+ EE
Sbjct: 468 ILLCTDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTARGLNGRGHALLILRPEE 524
>CGD|CAL0004182 [details] [associations]
symbol:HCA4 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 CGD:CAL0004182 GO:GO:0005524 GO:GO:0005730
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 EMBL:AACQ01000023 EMBL:AACQ01000025
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
RefSeq:XP_720233.1 RefSeq:XP_720463.1 ProteinModelPortal:Q5AF95
STRING:Q5AF95 GeneID:3637911 GeneID:3638091 KEGG:cal:CaO19.10227
KEGG:cal:CaO19.2712 KO:K14776 InterPro:IPR025313 Pfam:PF13959
Uniprot:Q5AF95
Length = 765
Score = 473 (171.6 bits), Expect = 2.0e-42, P = 2.0e-42
Identities = 133/461 (28%), Positives = 229/461 (49%)
Query: 377 SQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLP 436
S +F + I+ T+K L A ++ +T +Q+ T+ L+G+D + A+TG+GK++AFL+P
Sbjct: 46 SVSQFSDLPITENTLKGLKEATFVSLTDIQKKTIPIALKGEDLMGTARTGSGKTLAFLIP 105
Query: 437 AIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRF 496
IE++++ + T+ + LI+ PTRELA QI E + + ++ + GG
Sbjct: 106 VIESLIR---NKITEY-DGLAALIVSPTRELAVQIF-EVLTKIGKYNTFSAGLVTGGKDV 160
Query: 497 KVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVE 556
+ ++ R+ ILV TPGR+ H+ G+ L++LVLDEAD LD+GF+K ++
Sbjct: 161 QFEKERVSR--MNILVGTPGRISQHLNEAVGMETS--NLQVLVLDEADRCLDMGFKKQID 216
Query: 557 NIVDCLPRRRQSLLFSATMPKEL--VLKREHTYIDTVGLGSVE----TPVKIKQSCLVAP 610
NI+ LP RQ+LLFSAT + + + + T + +G+ S + TP ++Q + P
Sbjct: 217 NILGHLPTTRQTLLFSATQSESVNDLARLSLTNPNKIGVSSDQEVSATPESLEQYYVKVP 276
Query: 611 HELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK--MNVREMYSRKPQL 668
+ +L +K H+ K++VF S+ Y R ++ +++ ++Y R Q
Sbjct: 277 LDEKLDVLWSFIKSHLKS----KILVFFSSSKQVQYTYETFRTLQPGISLMKLYGRHKQT 332
Query: 669 YRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXXXX 728
R + +F ++ L +D+ ARG+D+P + VVQV P D Y+H
Sbjct: 333 SRLETTMKFSQAQHACLFATDIVARGLDFPAIDWVVQVDCPEDAATYVHRVGRSARFGRK 392
Query: 729 XXXVLLLAPWEEYFXXXXXXXXXXX----XXXXXXNPEIQLQMDNHMAKIDNNVKEAAYH 784
+L+L P EE I+ Q+ + K D +K
Sbjct: 393 GKSLLMLLPSEEEGMLKRLKIHKIEPKLMNIKQKSKKSIRPQLQSLCFK-DPVMKNLGQR 451
Query: 785 AWLGYYNSIREIGRDKTT--LVEL-ANKFAQSIGLQRPPPL 822
A++ Y+ S+ I +DK + EL A +A S+GL P +
Sbjct: 452 AFIAYFKSVH-IQKDKDVFKVEELPAESYAASLGLPGAPKI 491
>UNIPROTKB|D4A824 [details] [associations]
symbol:Ddx18 "Protein Ddx18" species:10116 "Rattus
norvegicus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 RGD:1549712 GO:GO:0005524 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959
EMBL:AC128353 IPI:IPI00393022 Ensembl:ENSRNOT00000028172
ArrayExpress:D4A824 Uniprot:D4A824
Length = 662
Score = 466 (169.1 bits), Expect = 3.0e-42, P = 3.0e-42
Identities = 125/357 (35%), Positives = 188/357 (52%)
Query: 390 TIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSST 449
T+KA+ G+ MT +Q ++ LEG+D + AKTG+GK++AFL+P IE ++K
Sbjct: 182 TLKAIEEMGFKHMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPVIELIVKLKFMPR 241
Query: 450 TQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQ 509
VLIL PTRELA Q L+ +H L + G R Q+ L
Sbjct: 242 NGTG----VLILSPTRELAMQTFGVLKELMTHHVHTYGLIMGGSNRSAEVQKLLNG--IN 295
Query: 510 ILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQSL 569
I+VATPGRLLDH++N G + L+ LV+DEAD +LD+GF ++++ I+ LP RRQ++
Sbjct: 296 IVVATPGRLLDHMQNTPGFMYK--NLQCLVIDEADRILDVGFEEELKQIIKLLPARRQTM 353
Query: 570 LFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILHHLLK 623
LFSAT ++ + LK+E Y+ V T ++Q +V P E F +L LK
Sbjct: 354 LFSATQTRKVEDLARISLKKEPLYVGVDDDKEVATVDGLEQGYVVCPSEKRFLLLFTFLK 413
Query: 624 EHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEFRASKRL 683
++ KV+VF S+ M Y LL + + V ++ ++ Q R +F +
Sbjct: 414 KN----RKKKVMVFFSSCMSVKYHYELLNYIDLPVLAIHGKQKQNKRTTTFFQFCNADSG 469
Query: 684 ILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXXXXXXXVLLLAPWEE 740
IL+ +DV+ARG+D P+V +VQ P D ++YIH LL+ EE
Sbjct: 470 ILLCTDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTARGLNGRGHALLILRPEE 526
>FB|FBgn0025140 [details] [associations]
symbol:pit "pitchoune" species:7227 "Drosophila melanogaster"
[GO:0005730 "nucleolus" evidence=NAS;IDA] [GO:0016049 "cell growth"
evidence=IMP] [GO:0008283 "cell proliferation" evidence=IMP]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS;NAS]
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0005634
"nucleus" evidence=NAS] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 EMBL:AE014297
GO:GO:0005524 GO:GO:0005730 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313
Pfam:PF13959 KO:K13179 OMA:KDGYRSY EMBL:U84552 EMBL:AY071402
EMBL:AY119620 RefSeq:NP_524446.3 RefSeq:NP_732694.2
UniGene:Dm.33428 ProteinModelPortal:Q9VD51 SMR:Q9VD51
DIP:DIP-19700N MINT:MINT-1004790 STRING:Q9VD51 PaxDb:Q9VD51
EnsemblMetazoa:FBtr0084174 EnsemblMetazoa:FBtr0084175 GeneID:42595
KEGG:dme:Dmel_CG6375 UCSC:CG6375-RA CTD:42595 FlyBase:FBgn0025140
GeneTree:ENSGT00680000100037 InParanoid:Q9VD51 OrthoDB:EOG4H189W
PhylomeDB:Q9VD51 ChiTaRS:pit GenomeRNAi:42595 NextBio:829597
Bgee:Q9VD51 GermOnline:CG6375 Uniprot:Q9VD51
Length = 680
Score = 467 (169.5 bits), Expect = 3.5e-42, P = 3.5e-42
Identities = 136/450 (30%), Positives = 227/450 (50%)
Query: 386 ISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKAT 445
+S T++A+ G+ +MT +Q +L+ L+G+D V A+TG+GK++AFL+PA+E + K
Sbjct: 194 VSEATLRAIKEMGFTEMTEIQSKSLTPLLKGRDLVGAAQTGSGKTLAFLIPAVELINKLR 253
Query: 446 SSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLES 505
V+I+ PTREL+ Q L+ +H L + GG+ +V+ +L
Sbjct: 254 FMPRNGTG----VIIISPTRELSMQTFGVLKELMAHHHHTYGLVM-GGSNRQVESEKLGK 308
Query: 506 DPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRR 565
ILVATPGRLLDH++N + L+ L++DE D +L++GF ++++ I++ LP+R
Sbjct: 309 G-INILVATPGRLLDHLQNSPDFLYK--NLQCLIIDEVDRILEIGFEEELKQIINLLPKR 365
Query: 566 RQSLLFSATMP------KELVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILH 619
RQ++LFSAT +L LK E Y+ T ++Q +V P E +L
Sbjct: 366 RQTMLFSATQTARIEALSKLALKSEPIYVGVHDNQDTATVDGLEQGYIVCPSEKRLLVLF 425
Query: 620 HLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEFRA 679
LK++ KV+VF S+ M + L + + V ++ ++ Q R +F
Sbjct: 426 TFLKKN----RKKKVMVFFSSCMSVKYHHELFNYIDLPVTSIHGKQKQTKRTTTFFQFCN 481
Query: 680 SKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXXXXXXXVLLLAPWE 739
++ IL+ +DV+ARG+D P V +VQ P D +YIH LLL E
Sbjct: 482 AESGILLCTDVAARGLDIPQVDWIVQYDPPDDPREYIHRVGRTARGSGTSGHALLLMRPE 541
Query: 740 EY----FXXXXXXXXXXXXXXXXXNPEIQLQMDNHMAK---IDNNVKEAAYHAWLGYYNS 792
E + +IQLQ++ +AK ++ + KEA + +++ Y+S
Sbjct: 542 ELGFLRYLKAAKVPLNEFEFSWQKIADIQLQLEKLIAKNYFLNQSAKEA-FKSYVRAYDS 600
Query: 793 --IREIGRDKTTLVELANKFAQSIGLQRPP 820
+++I T ++L A+S G PP
Sbjct: 601 HQLKQIFNVNT--LDL-QAVAKSFGFLVPP 627
>RGD|1549712 [details] [associations]
symbol:Ddx18 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 18"
species:10116 "Rattus norvegicus" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA;ISO] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 RGD:1549712 GO:GO:0005524
GO:GO:0005730 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959
HOGENOM:HOG000268799 KO:K13179 OMA:KDGYRSY
GeneTree:ENSGT00680000100037 CTD:8886 HOVERGEN:HBG105702
OrthoDB:EOG4894MF EMBL:AC128353 EMBL:BC083919 IPI:IPI00367078
RefSeq:NP_001006997.1 UniGene:Rn.26598 STRING:Q5XHY0
Ensembl:ENSRNOT00000037203 GeneID:308490 KEGG:rno:308490
UCSC:RGD:1549712 InParanoid:Q5XHY0 NextBio:658990
Genevestigator:Q5XHY0 Uniprot:Q5XHY0
Length = 674
Score = 466 (169.1 bits), Expect = 3.9e-42, Sum P(2) = 3.9e-42
Identities = 125/357 (35%), Positives = 188/357 (52%)
Query: 390 TIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSST 449
T+KA+ G+ MT +Q ++ LEG+D + AKTG+GK++AFL+P IE ++K
Sbjct: 194 TLKAIEEMGFKHMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPVIELIVKLKFMPR 253
Query: 450 TQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQ 509
VLIL PTRELA Q L+ +H L + G R Q+ L
Sbjct: 254 NGTG----VLILSPTRELAMQTFGVLKELMTHHVHTYGLIMGGSNRSAEVQKLLNG--IN 307
Query: 510 ILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQSL 569
I+VATPGRLLDH++N G + L+ LV+DEAD +LD+GF ++++ I+ LP RRQ++
Sbjct: 308 IVVATPGRLLDHMQNTPGFMYK--NLQCLVIDEADRILDVGFEEELKQIIKLLPARRQTM 365
Query: 570 LFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILHHLLK 623
LFSAT ++ + LK+E Y+ V T ++Q +V P E F +L LK
Sbjct: 366 LFSATQTRKVEDLARISLKKEPLYVGVDDDKEVATVDGLEQGYVVCPSEKRFLLLFTFLK 425
Query: 624 EHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEFRASKRL 683
++ KV+VF S+ M Y LL + + V ++ ++ Q R +F +
Sbjct: 426 KN----RKKKVMVFFSSCMSVKYHYELLNYIDLPVLAIHGKQKQNKRTTTFFQFCNADSG 481
Query: 684 ILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXXXXXXXVLLLAPWEE 740
IL+ +DV+ARG+D P+V +VQ P D ++YIH LL+ EE
Sbjct: 482 ILLCTDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTARGLNGRGHALLILRPEE 538
Score = 37 (18.1 bits), Expect = 3.9e-42, Sum P(2) = 3.9e-42
Identities = 8/25 (32%), Positives = 11/25 (44%)
Query: 119 DDGPVKSEQRPRSGAEANQRPRLAG 143
D P + + G EA + P AG
Sbjct: 121 DTEPDPKKAKTEEGTEAREEPEGAG 145
>CGD|CAL0003050 [details] [associations]
symbol:HAS1 species:5476 "Candida albicans" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=IGI;ISS] [GO:0042274
"ribosomal small subunit biogenesis" evidence=IGI;ISS] [GO:0030686
"90S preribosome" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0005635 "nuclear envelope" evidence=IEA]
[GO:0030687 "preribosome, large subunit precursor" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 CGD:CAL0003050 GO:GO:0005524
GO:GO:0005730 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006364 GO:GO:0004004 GO:GO:0042274
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 EMBL:AACQ01000012
InterPro:IPR025313 Pfam:PF13959 KO:K13179 EMBL:AACQ01000011
RefSeq:XP_721871.1 RefSeq:XP_722031.1 STRING:Q5AK59 GeneID:3636361
GeneID:3636443 KEGG:cal:CaO19.11444 KEGG:cal:CaO19.3962
Uniprot:Q5AK59
Length = 565
Score = 450 (163.5 bits), Expect = 6.0e-42, P = 6.0e-42
Identities = 124/347 (35%), Positives = 188/347 (54%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F+ S T+KA+ G+ +MT+VQ T+ L G+D + AKTG+GK++AFL+PAIE
Sbjct: 110 FENADFSEPTMKAIKEMGFTKMTKVQAKTIPPLLAGRDVLGAAKTGSGKTLAFLIPAIEL 169
Query: 441 V--LKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGI-GVLTLVGGTRFK 497
+ LK + T V+I+ PTRELA QI A L++ H G++ +GG +
Sbjct: 170 LYSLKIKPRNGTA------VIIITPTRELALQIFGVARELMQFHSQTCGIV--IGGADRR 221
Query: 498 VDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVEN 557
+ +L +LVATPGRLLDH++N + LK LV+DEAD +L++GF +++
Sbjct: 222 QEATKLAKG-VNLLVATPGRLLDHLKNTQFV---FSNLKALVIDEADRILEIGFEDEMKQ 277
Query: 558 IVDCLPRR-RQSLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSCLVAP 610
I+ LP RQS+LFSAT + + L+ YI+ V V T ++Q +V
Sbjct: 278 IIKVLPNENRQSMLFSATQTTKVEDLARISLRPGPLYINVVPEKDVSTADGLEQGYVVCD 337
Query: 611 HELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYR 670
+ F +L LK ++ K+IVF S+ LL + + V +++ ++ Q R
Sbjct: 338 SDKRFLLLFSFLKRNV----KKKIIVFLSSCNSVKFYSELLNYIDLPVLDLHGKQKQQKR 393
Query: 671 DRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 717
EF +K+ ILV +DV+ARG+D P V +VQ P D YIH
Sbjct: 394 TNTFFEFCNAKQGILVCTDVAARGLDIPAVDWIVQFDPPDDPRDYIH 440
>UNIPROTKB|Q5AK59 [details] [associations]
symbol:HAS1 "ATP-dependent RNA helicase HAS1"
species:237561 "Candida albicans SC5314" [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=IGI] [GO:0042274 "ribosomal small
subunit biogenesis" evidence=IGI] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 CGD:CAL0003050
GO:GO:0005524 GO:GO:0005730 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0004004
GO:GO:0042274 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
EMBL:AACQ01000012 InterPro:IPR025313 Pfam:PF13959 KO:K13179
EMBL:AACQ01000011 RefSeq:XP_721871.1 RefSeq:XP_722031.1
STRING:Q5AK59 GeneID:3636361 GeneID:3636443 KEGG:cal:CaO19.11444
KEGG:cal:CaO19.3962 Uniprot:Q5AK59
Length = 565
Score = 450 (163.5 bits), Expect = 6.0e-42, P = 6.0e-42
Identities = 124/347 (35%), Positives = 188/347 (54%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F+ S T+KA+ G+ +MT+VQ T+ L G+D + AKTG+GK++AFL+PAIE
Sbjct: 110 FENADFSEPTMKAIKEMGFTKMTKVQAKTIPPLLAGRDVLGAAKTGSGKTLAFLIPAIEL 169
Query: 441 V--LKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGI-GVLTLVGGTRFK 497
+ LK + T V+I+ PTRELA QI A L++ H G++ +GG +
Sbjct: 170 LYSLKIKPRNGTA------VIIITPTRELALQIFGVARELMQFHSQTCGIV--IGGADRR 221
Query: 498 VDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVEN 557
+ +L +LVATPGRLLDH++N + LK LV+DEAD +L++GF +++
Sbjct: 222 QEATKLAKG-VNLLVATPGRLLDHLKNTQFV---FSNLKALVIDEADRILEIGFEDEMKQ 277
Query: 558 IVDCLPRR-RQSLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSCLVAP 610
I+ LP RQS+LFSAT + + L+ YI+ V V T ++Q +V
Sbjct: 278 IIKVLPNENRQSMLFSATQTTKVEDLARISLRPGPLYINVVPEKDVSTADGLEQGYVVCD 337
Query: 611 HELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYR 670
+ F +L LK ++ K+IVF S+ LL + + V +++ ++ Q R
Sbjct: 338 SDKRFLLLFSFLKRNV----KKKIIVFLSSCNSVKFYSELLNYIDLPVLDLHGKQKQQKR 393
Query: 671 DRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 717
EF +K+ ILV +DV+ARG+D P V +VQ P D YIH
Sbjct: 394 TNTFFEFCNAKQGILVCTDVAARGLDIPAVDWIVQFDPPDDPRDYIH 440
>WB|WBGene00015232 [details] [associations]
symbol:B0511.6 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] [GO:0043652 "engulfment of apoptotic cell"
evidence=IMP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0008340
GO:GO:0040007 GO:GO:0002119 GO:GO:0003723 GO:GO:0043652
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
InterPro:IPR025313 Pfam:PF13959 HOGENOM:HOG000268799 KO:K13179
OMA:KDGYRSY GeneTree:ENSGT00680000100037 HSSP:P10081 EMBL:FO080219
PIR:T33113 RefSeq:NP_492779.1 ProteinModelPortal:O61815 SMR:O61815
DIP:DIP-27278N MINT:MINT-1068292 STRING:O61815 PaxDb:O61815
EnsemblMetazoa:B0511.6.1 EnsemblMetazoa:B0511.6.2 GeneID:172954
KEGG:cel:CELE_B0511.6 UCSC:B0511.6.1 CTD:172954 WormBase:B0511.6
InParanoid:O61815 NextBio:877669 Uniprot:O61815
Length = 544
Score = 449 (163.1 bits), Expect = 7.7e-42, P = 7.7e-42
Identities = 163/554 (29%), Positives = 264/554 (47%)
Query: 312 DVKKMGSSASLGK----YDMKITKRVPLKSLEDEHDFEEQVELIRKEISXXXXXXXXXXX 367
DVKK L + ++ K K V ++ +E D EE+VE +K +
Sbjct: 4 DVKKKVLKRKLKQMKDGHEKKKAKEVVVEEPMEEED-EEEVEEEQKHQTEESSETKVSEF 62
Query: 368 XXXXXXPILSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGT 427
L K ++ +KA+ G+ MT +Q ++ LEGKD + AKTG+
Sbjct: 63 LTKTTFASLEGK------VNANLLKAVQGLGFTTMTEIQAKSIDPLLEGKDVLASAKTGS 116
Query: 428 GKSIAFLLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGV 487
GK++AFLLPAIE + K V+I+ PTREL+ Q LL+ + +
Sbjct: 117 GKTLAFLLPAIELLHKLNWKQHNGTG----VIIVSPTRELSMQTYGVLSELLEGSN-LTY 171
Query: 488 LTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLL 547
++GG+ ++ +L ILVATPGRLLDH++N VR M K L++DEAD +L
Sbjct: 172 GLVMGGSNRSAEKDKLAKG-VSILVATPGRLLDHLQNTDNFLVRNM--KCLIIDEADRIL 228
Query: 548 DLGFRKDVENIVDCLPRRRQSLLFSAT-MPK--ELVLKREHTYIDTVGLG--SVETPVK- 601
D+GF +++ ++ LP++RQS+LFSAT PK ELV H+ V + + E V+
Sbjct: 229 DIGFEIEMQQVLRHLPKQRQSMLFSATHSPKVDELVKLALHSNPVRVSVHEKAEEATVEG 288
Query: 602 IKQSCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREM 661
++Q +VAP + +L LK++ KV+VF S+ + LL + + +
Sbjct: 289 LQQGYIVAPSDKRLLLLFTFLKKN----KTKKVMVFFSSCNSVKFHHELLNYIDIPCMSI 344
Query: 662 YSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXX 721
+ ++ Q R +F ++ IL+ +DV+ARG+D P V +VQ + +YIH
Sbjct: 345 HGKQKQQKRTTTFFQFCQAETGILLCTDVAARGLDIPAVDWIVQYDPTDEPREYIHRVGR 404
Query: 722 XXXXXXXXXXVLLLAPWEEY----FXXXXXXXXXXXXXXXXXNPEIQLQMDNHMAK---I 774
LL+ EE + IQ Q++N ++K +
Sbjct: 405 TARGTNGSGKALLVLRPEELGFLRYLKAAKVTLNEFEFSWSKVANIQSQLENLISKNYYL 464
Query: 775 DNNVKEAAYHAWLGYYNS--IREIGRDKTTLVELANKFAQSIGLQRPP----PLFRKTAL 828
+ + KEA Y +L Y+S +++I D T + +L ++S G PP P+ K +
Sbjct: 465 NKSAKEA-YKCYLRAYDSHSLKDIF-DVTNM-DLT-AVSKSFGFSVPPFVDLPISNKPKV 520
Query: 829 KMGLKDIPGIRLRK 842
++ K + G RK
Sbjct: 521 EIRSK-LSGAGYRK 533
>UNIPROTKB|E2RFA3 [details] [associations]
symbol:DDX18 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313
Pfam:PF13959 KO:K13179 OMA:KDGYRSY GeneTree:ENSGT00680000100037
CTD:8886 EMBL:AAEX03011884 RefSeq:XP_533327.3
Ensembl:ENSCAFT00000007958 GeneID:476120 KEGG:cfa:476120
Uniprot:E2RFA3
Length = 669
Score = 460 (167.0 bits), Expect = 8.4e-42, Sum P(2) = 8.4e-42
Identities = 122/357 (34%), Positives = 191/357 (53%)
Query: 390 TIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSST 449
T+KA+ G+ MT +Q ++ LEG+D + AKTG+GK++AFL+PA+E ++K
Sbjct: 189 TLKAIKEMGFTNMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPAVELIVKLKFMPR 248
Query: 450 TQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQ 509
VLIL PTRELA Q L+ H L ++GG+ + ++L +
Sbjct: 249 NGTG----VLILSPTRELAMQTFGVLKELMMYHVHTYGL-IMGGSNRSAEAQKL-GNGIN 302
Query: 510 ILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQSL 569
I+VATPGRLLDH++N G + L+ LV+DEAD +LD+GF ++++ I+ LP RRQ++
Sbjct: 303 IIVATPGRLLDHMQNTPGFMYK--NLQCLVIDEADRILDVGFEEELKQIIKLLPTRRQTM 360
Query: 570 LFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILHHLLK 623
LFSAT ++ + LK+E Y+ + T ++Q +V P E F +L LK
Sbjct: 361 LFSATQTRKVEDLARISLKKEPLYVGVDDDKANATVDGLEQGYVVCPSEKRFLLLFTFLK 420
Query: 624 EHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEFRASKRL 683
++ K++VF S+ Y LL + + V ++ R+ Q R +F +
Sbjct: 421 KN----RKKKLMVFFSSCKSVKYHYELLNYIDLPVLAIHGRQKQNKRTTTFFQFCNADSG 476
Query: 684 ILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXXXXXXXVLLLAPWEE 740
IL+ +DV+ARG+D P+V +VQ P D ++YIH LL+ EE
Sbjct: 477 ILLCTDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTARGLNGRGHALLILHPEE 533
Score = 41 (19.5 bits), Expect = 8.4e-42, Sum P(2) = 8.4e-42
Identities = 13/66 (19%), Positives = 28/66 (42%)
Query: 68 ARVRSQIRTKLFDKADPDSETNQHKPMSPDEHVKALADRFMKEGAEDLWNEDDGPVKSEQ 127
++ + + + K+ D A PD++ ++ + E + G + E+D V S
Sbjct: 107 SKKKKKRKRKMVDDAGPDTKKSKTEDKGDSEEGTQAPEETENNGEKPDDEEEDSEVPSLP 166
Query: 128 RPRSGA 133
+GA
Sbjct: 167 LGLTGA 172
>UNIPROTKB|Q5ZLB0 [details] [associations]
symbol:DDX47 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0006915 "apoptotic process" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0006915
GO:GO:0005730 GO:GO:0008380 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268802 GeneTree:ENSGT00670000098028 CTD:51202
HOVERGEN:HBG100512 KO:K14777 OMA:IFIPSKF OrthoDB:EOG4TXBRS
EMBL:AADN02006011 EMBL:AADN02006010 EMBL:AJ719824 IPI:IPI00584081
RefSeq:NP_001007854.1 UniGene:Gga.13941 SMR:Q5ZLB0 STRING:Q5ZLB0
Ensembl:ENSGALT00000019245 GeneID:417959 KEGG:gga:417959
InParanoid:Q5ZLB0 NextBio:20821184 Uniprot:Q5ZLB0
Length = 453
Score = 448 (162.8 bits), Expect = 9.9e-42, P = 9.9e-42
Identities = 115/348 (33%), Positives = 186/348 (53%)
Query: 374 PILSQKR-FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIA 432
P++ + R F + G++ + +A G+ T++Q + L+G+D + A+TG+GK+ A
Sbjct: 19 PVVEEARSFKDLGVTDVLCEACDQLGWKVPTKIQVEAIPVALQGRDIIGLAETGSGKTGA 78
Query: 433 FLLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVG 492
F LP ++A+L A ++ L+L PTRELA QI+ E L + G+ +VG
Sbjct: 79 FALPILQALLDAPQR--------LFALVLTPTRELAFQIS-EQFEALGSSIGVHSAVIVG 129
Query: 493 GTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFR 552
G L P I++ATPGRL+DH+EN G ++R LK LV+DEAD +L++ F
Sbjct: 130 GIDSMSQSLALAKKP-HIIIATPGRLVDHLENTKGFNLR--ALKFLVMDEADRILNMDFE 186
Query: 553 KDVENIVDCLPRRRQSLLFSATMPKELV-LKRE--HTYIDTVGLGSVETPVKIKQSCLVA 609
+V+ I+ +PR R++ LFSATM K++ L+R + +T K++Q +
Sbjct: 187 TEVDKILKVIPRDRKTFLFSATMTKQVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYIFI 246
Query: 610 PHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLY 669
P + L ++L E + G ++FCST T LLLR + ++ + Q
Sbjct: 247 PSKFKDSYLVYILNE-LAGN---SFMIFCSTCNNTQRTALLLRNLGFTAIPLHGQMSQNK 302
Query: 670 RDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 717
R +F+A R IL+ +DV++RG+D P V V+ IP + YIH
Sbjct: 303 RLGSLNKFKAKARSILLATDVASRGLDIPHVDVVINFDIPTHSKDYIH 350
>ZFIN|ZDB-GENE-071022-2 [details] [associations]
symbol:ddx10 "DEAD (Asp-Glu-Ala-Asp) box polypeptide
10" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
ZFIN:ZDB-GENE-071022-2 GO:GO:0005524 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959
GeneTree:ENSGT00550000074980 EMBL:CR450711 IPI:IPI00898518
Ensembl:ENSDART00000125785 ArrayExpress:F1QMM9 Bgee:F1QMM9
Uniprot:F1QMM9
Length = 875
Score = 469 (170.2 bits), Expect = 1.1e-41, P = 1.1e-41
Identities = 135/456 (29%), Positives = 228/456 (50%)
Query: 380 RFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIE 439
+F + +S T+K L A Y Q T +Q T+ L+G+D + AKTG+GK++AFL+P +E
Sbjct: 71 KFSDFPLSKKTLKGLLEAQYRQPTEIQRQTIGFALQGRDVLGAAKTGSGKTLAFLIPVLE 130
Query: 440 AVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVD 499
+ + ++ L LI+ PTRELA Q + KNH+ L ++GG K +
Sbjct: 131 CLYREQWTAMDGLG----ALIISPTRELAYQTFEVLRKVGKNHEFSAGL-VIGGKDLKDE 185
Query: 500 QRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIV 559
++ I++ TPGRLL H++ + + L MLVLDEAD +LD+GF + IV
Sbjct: 186 SEKIHRT--NIIICTPGRLLQHMDETA--TFHASDLHMLVLDEADRILDMGFADTLNAIV 241
Query: 560 DCLPRRRQSLLFSATMP---KELV-LK-REHTYIDTVGLGSVETPVKIKQSCLVAPHELH 614
+ LP+ RQ+LLFSAT K+L L ++ Y+ TP ++Q+ +V ELH
Sbjct: 242 ENLPKSRQTLLFSATQTRSVKDLARLSLKDPEYVWVHEQAKFSTPATLEQNYVVC--ELH 299
Query: 615 FQI--LHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK--MNVREMYSRKPQLYR 670
++ L+ L+ H+ K+IVF + L+ + ++ ++V ++ ++ Q+ R
Sbjct: 300 QKVNMLYSFLRSHL----QKKIIVFFACCKEVQYLFRIFCRLRPGISVLALHGKQQQMKR 355
Query: 671 DRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXXXXXX 730
+ +F +L +D++ARG+D+P V V+Q P D YIH
Sbjct: 356 VEVYNDFVRKTSAVLFATDIAARGLDFPAVNWVLQFDCPEDANTYIHRVGRTARYKEGGE 415
Query: 731 XVLLLAPWEEYFXXXXXXXXXXXXXXXXXNPE----IQLQMDNHMAKIDNNVKEAAYHAW 786
+L+L P EE NPE +Q +++ +A+ + KE A +
Sbjct: 416 ALLVLLPSEEKGMISQLQEKKVPINKIQVNPEKLMSVQQKLEAFLAQ-EKEQKERAQRCF 474
Query: 787 LGYYNSIREI-GRDKTTLVELA-NKFAQSIGLQRPP 820
+ Y S+ + +D +++L ++A S+GL P
Sbjct: 475 VSYLRSVYLMKNKDVFDVLQLKLPEYAMSLGLAVAP 510
>UNIPROTKB|Q29S22 [details] [associations]
symbol:DDX47 "Probable ATP-dependent RNA helicase DDX47"
species:9913 "Bos taurus" [GO:0005730 "nucleolus" evidence=ISS]
[GO:0008380 "RNA splicing" evidence=ISS] [GO:0006915 "apoptotic
process" evidence=ISS] [GO:0006364 "rRNA processing" evidence=ISS]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0006915 GO:GO:0005730
GO:GO:0008380 GO:GO:0006397 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268802 GeneTree:ENSGT00670000098028 EMBL:BC113207
IPI:IPI00688068 RefSeq:NP_001039850.1 UniGene:Bt.23258
ProteinModelPortal:Q29S22 SMR:Q29S22 PRIDE:Q29S22
Ensembl:ENSBTAT00000003058 GeneID:534721 KEGG:bta:534721 CTD:51202
HOVERGEN:HBG100512 InParanoid:Q29S22 KO:K14777 OMA:IFIPSKF
OrthoDB:EOG4TXBRS NextBio:20876515 Uniprot:Q29S22
Length = 457
Score = 447 (162.4 bits), Expect = 1.3e-41, P = 1.3e-41
Identities = 117/342 (34%), Positives = 184/342 (53%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
K F + G++ + +A G+ + T++Q + L+G+D + A+TG+GK+ AF LP +
Sbjct: 26 KTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFALPIL 85
Query: 439 EAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
A+L+ T Q ++ L+L PTRELA QI+ E L + G+ +VGG
Sbjct: 86 NALLE-----TPQR---LFALVLTPTRELAFQIS-EQFEALGSSIGVQCAVIVGGIDSMS 136
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
L P I++ATPGRL+DH+EN G ++R LK LV+DEAD +L++ F +V+ I
Sbjct: 137 QSLALAKKP-HIVIATPGRLIDHLENTKGFNLR--ALKYLVMDEADRILNMDFETEVDKI 193
Query: 559 VDCLPRRRQSLLFSATMPKELV-LKRE--HTYIDTVGLGSVETPVKIKQSCLVAPHELHF 615
+ +PR R++ LFSATM K++ L+R + +T K++Q L P +
Sbjct: 194 LKVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYLFIPSKFKD 253
Query: 616 QILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISE 675
L ++L E + G ++FCST T LLLR + ++ + Q R
Sbjct: 254 TYLVYILNE-LAGN---SFMIFCSTCNNTQRTALLLRNLGFTAIPLHGQMSQSKRLGSLN 309
Query: 676 EFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 717
+F+A R IL+ +DV++RG+D P V VV IP + YIH
Sbjct: 310 KFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIH 351
>UNIPROTKB|I3L976 [details] [associations]
symbol:DDX47 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008380 "RNA splicing" evidence=IEA] [GO:0006915
"apoptotic process" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0006915
GO:GO:0005730 GO:GO:0008380 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00670000098028
OMA:IFIPSKF Ensembl:ENSSSCT00000025539 Uniprot:I3L976
Length = 456
Score = 447 (162.4 bits), Expect = 1.3e-41, P = 1.3e-41
Identities = 117/342 (34%), Positives = 184/342 (53%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
K F + G++ + +A G+ + T++Q + L+G+D + A+TG+GK+ AF LP +
Sbjct: 23 KTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFALPIL 82
Query: 439 EAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
A+L+ T Q ++ L+L PTRELA QI+ E L + G+ +VGG
Sbjct: 83 NALLE-----TPQR---LFALVLTPTRELAFQIS-EQFEALGSSIGVQCAVIVGGIDSMS 133
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
L P I++ATPGRL+DH+EN G ++R LK LV+DEAD +L++ F +V+ I
Sbjct: 134 QSLALAKKP-HIVIATPGRLIDHLENTKGFNLR--ALKYLVMDEADRILNMDFETEVDKI 190
Query: 559 VDCLPRRRQSLLFSATMPKELV-LKRE--HTYIDTVGLGSVETPVKIKQSCLVAPHELHF 615
+ +PR R++ LFSATM K++ L+R + +T K++Q L P +
Sbjct: 191 LKVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYLFIPSKFKD 250
Query: 616 QILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISE 675
L ++L E + G ++FCST T LLLR + ++ + Q R
Sbjct: 251 TYLVYILNE-LAGN---SFMIFCSTCNNTQRTALLLRNLGFTAIPLHGQMSQSKRLGSLN 306
Query: 676 EFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 717
+F+A R IL+ +DV++RG+D P V VV IP + YIH
Sbjct: 307 KFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIH 348
>MGI|MGI:1915005 [details] [associations]
symbol:Ddx47 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 47"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005730 "nucleolus"
evidence=ISO] [GO:0006364 "rRNA processing" evidence=ISO]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0006915 "apoptotic
process" evidence=ISO] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008380 "RNA splicing" evidence=ISO]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:1915005
GO:GO:0005524 GO:GO:0006915 GO:GO:0005730 GO:GO:0008380
GO:GO:0006397 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268802
GeneTree:ENSGT00670000098028 CTD:51202 HOVERGEN:HBG100512 KO:K14777
OMA:IFIPSKF OrthoDB:EOG4TXBRS ChiTaRS:DDX47 EMBL:AK010310
EMBL:AK076982 IPI:IPI00187240 RefSeq:NP_080636.2 UniGene:Mm.166524
ProteinModelPortal:Q9CWX9 SMR:Q9CWX9 IntAct:Q9CWX9
PhosphoSite:Q9CWX9 PaxDb:Q9CWX9 PRIDE:Q9CWX9
Ensembl:ENSMUST00000032326 GeneID:67755 KEGG:mmu:67755
InParanoid:Q9CWX9 NextBio:325481 Bgee:Q9CWX9 CleanEx:MM_DDX47
Genevestigator:Q9CWX9 GermOnline:ENSMUSG00000030204 Uniprot:Q9CWX9
Length = 455
Score = 447 (162.4 bits), Expect = 1.3e-41, P = 1.3e-41
Identities = 117/342 (34%), Positives = 184/342 (53%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
K F + G++ + +A G+ + T++Q + L+G+D + A+TG+GK+ AF LP +
Sbjct: 24 KTFKDLGVTDVLCEACDQLGWAKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFALPIL 83
Query: 439 EAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
A+L+ T Q ++ L+L PTRELA QI+ E L + G+ +VGG
Sbjct: 84 NALLE-----TPQR---LFALVLTPTRELAFQIS-EQFEALGSSIGVQCAVIVGGIDSMS 134
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
L P I++ATPGRL+DH+EN G ++R LK LV+DEAD +L++ F +V+ I
Sbjct: 135 QSLALAKKP-HIVIATPGRLIDHLENTKGFNLR--ALKYLVMDEADRILNMDFETEVDKI 191
Query: 559 VDCLPRRRQSLLFSATMPKELV-LKRE--HTYIDTVGLGSVETPVKIKQSCLVAPHELHF 615
+ +PR R++ LFSATM K++ L+R + +T K++Q L P +
Sbjct: 192 LKVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYLFIPSKFKD 251
Query: 616 QILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISE 675
L ++L E + G ++FCST T LLLR + ++ + Q R
Sbjct: 252 TYLVYILNE-LAGN---SFMIFCSTCNNTQRTALLLRNLGFTAIPLHGQMSQSKRLGSLN 307
Query: 676 EFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 717
+F+A R IL+ +DV++RG+D P V VV IP + YIH
Sbjct: 308 KFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIH 349
>UNIPROTKB|G3V727 [details] [associations]
symbol:Ddx47 "Protein Ddx47" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0006915 "apoptotic process" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 EMBL:CH473964
GeneTree:ENSGT00670000098028 CTD:51202 KO:K14777 OMA:IFIPSKF
RefSeq:NP_001015005.2 UniGene:Rn.73790 Ensembl:ENSRNOT00000011096
GeneID:297685 KEGG:rno:297685 RGD:1310437 NextBio:642541
Uniprot:G3V727
Length = 455
Score = 447 (162.4 bits), Expect = 1.3e-41, P = 1.3e-41
Identities = 117/342 (34%), Positives = 184/342 (53%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
K F + G++ + +A G+ + T++Q + L+G+D + A+TG+GK+ AF LP +
Sbjct: 24 KTFKDLGVTDVLCEACDQLGWAKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFALPIL 83
Query: 439 EAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
A+L+ T Q ++ L+L PTRELA QI+ E L + G+ +VGG
Sbjct: 84 NALLE-----TPQR---LFALVLTPTRELAFQIS-EQFEALGSSIGVQCAVIVGGIDSMS 134
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
L P I++ATPGRL+DH+EN G ++R LK LV+DEAD +L++ F +V+ I
Sbjct: 135 QSLALAKKP-HIVIATPGRLIDHLENTKGFNLR--ALKYLVMDEADRILNMDFETEVDKI 191
Query: 559 VDCLPRRRQSLLFSATMPKELV-LKRE--HTYIDTVGLGSVETPVKIKQSCLVAPHELHF 615
+ +PR R++ LFSATM K++ L+R + +T K++Q L P +
Sbjct: 192 LKVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYLFIPSKFKD 251
Query: 616 QILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISE 675
L ++L E + G ++FCST T LLLR + ++ + Q R
Sbjct: 252 TYLVYILNE-LAGN---SFMIFCSTCNNTQRTALLLRNLGFTAIPLHGQMSQSKRLGSLN 307
Query: 676 EFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 717
+F+A R IL+ +DV++RG+D P V VV IP + YIH
Sbjct: 308 KFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIH 349
>UNIPROTKB|Q9NVP1 [details] [associations]
symbol:DDX18 "ATP-dependent RNA helicase DDX18"
species:9606 "Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=TAS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005730 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
InterPro:IPR025313 Pfam:PF13959 HOGENOM:HOG000268799 KO:K13179
OMA:KDGYRSY EMBL:AK001467 EMBL:BC001238 EMBL:BC003360 EMBL:BC024739
EMBL:X98743 EMBL:CR457060 IPI:IPI00301323 PIR:S71758
RefSeq:NP_006764.3 UniGene:Hs.363492 PDB:3LY5 PDBsum:3LY5
ProteinModelPortal:Q9NVP1 SMR:Q9NVP1 IntAct:Q9NVP1
MINT:MINT-1382348 STRING:Q9NVP1 PhosphoSite:Q9NVP1 DMDM:20532388
SWISS-2DPAGE:Q9NVP1 PaxDb:Q9NVP1 PeptideAtlas:Q9NVP1 PRIDE:Q9NVP1
Ensembl:ENST00000263239 GeneID:8886 KEGG:hsa:8886 UCSC:uc002tlh.1
CTD:8886 GeneCards:GC02P118572 HGNC:HGNC:2741 HPA:HPA035400
MIM:606355 neXtProt:NX_Q9NVP1 PharmGKB:PA27207 HOVERGEN:HBG105702
InParanoid:Q9NVP1 OrthoDB:EOG4894MF PhylomeDB:Q9NVP1
ChEMBL:CHEMBL5060 ChiTaRS:DDX18 EvolutionaryTrace:Q9NVP1
GenomeRNAi:8886 NextBio:33369 ArrayExpress:Q9NVP1 Bgee:Q9NVP1
CleanEx:HS_DDX18 Genevestigator:Q9NVP1 GermOnline:ENSG00000088205
Uniprot:Q9NVP1
Length = 670
Score = 461 (167.3 bits), Expect = 1.3e-41, Sum P(2) = 1.3e-41
Identities = 121/357 (33%), Positives = 192/357 (53%)
Query: 390 TIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSST 449
T+KA+ G+ MT +Q ++ LEG+D + AKTG+GK++AFL+PA+E ++K
Sbjct: 190 TLKAIKEMGFTNMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPAVELIVKLRFMPR 249
Query: 450 TQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQ 509
VLIL PTRELA Q L+ +H L ++GG+ + ++L +
Sbjct: 250 NGTG----VLILSPTRELAMQTFGVLKELMTHHVHTYGL-IMGGSNRSAEAQKL-GNGIN 303
Query: 510 ILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQSL 569
I+VATPGRLLDH++N G + L+ LV+DEAD +LD+GF ++++ I+ LP RRQ++
Sbjct: 304 IIVATPGRLLDHMQNTPGFMYK--NLQCLVIDEADRILDVGFEEELKQIIKLLPTRRQTM 361
Query: 570 LFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILHHLLK 623
LFSAT ++ + LK+E Y+ + T ++Q +V P E F +L LK
Sbjct: 362 LFSATQTRKVEDLARISLKKEPLYVGVDDDKANATVDGLEQGYVVCPSEKRFLLLFTFLK 421
Query: 624 EHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEFRASKRL 683
++ K++VF S+ M Y LL + + V ++ ++ Q R +F +
Sbjct: 422 KN----RKKKLMVFFSSCMSVKYHYELLNYIDLPVLAIHGKQKQNKRTTTFFQFCNADSG 477
Query: 684 ILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXXXXXXXVLLLAPWEE 740
L+ +DV+ARG+D P+V +VQ P D ++YIH LL+ EE
Sbjct: 478 TLLCTDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTARGLNGRGHALLILRPEE 534
Score = 38 (18.4 bits), Expect = 1.3e-41, Sum P(2) = 1.3e-41
Identities = 14/67 (20%), Positives = 30/67 (44%)
Query: 68 ARVRSQIRTKLFDKADPDSETNQHKPMSPDEHVKALADRFMKEGAEDLWN-EDDGPVKSE 126
++ + + + K+ + A+PD++ + + E A + + E N ED+ V S
Sbjct: 107 SKKKKKKKRKMVNDAEPDTKKAKTENKGKSEEESAETTKETENNVEKPDNDEDESEVPSL 166
Query: 127 QRPRSGA 133
+GA
Sbjct: 167 PLGLTGA 173
>UNIPROTKB|E2RN03 [details] [associations]
symbol:DDX47 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0006915 "apoptotic process" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0006915
GO:GO:0005730 GO:GO:0008380 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00670000098028
OMA:IFIPSKF EMBL:AAEX03015248 Ensembl:ENSCAFT00000020996
NextBio:20853120 Uniprot:E2RN03
Length = 482
Score = 446 (162.1 bits), Expect = 1.6e-41, P = 1.6e-41
Identities = 117/342 (34%), Positives = 184/342 (53%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
K F + G++ + +A G+ + T++Q + L+G+D + A+TG+GK+ AF LP +
Sbjct: 50 KTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFALPIL 109
Query: 439 EAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
A+L+ T Q ++ L+L PTRELA QI+ E L + G+ +VGG
Sbjct: 110 NALLE-----TPQR---LFALVLTPTRELAFQIS-EQFEALGSSIGVQSAVIVGGIDSMS 160
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
L P I++ATPGRL+DH+EN G ++R LK LV+DEAD +L++ F +V+ I
Sbjct: 161 QSLALAKKP-HIVIATPGRLIDHLENTKGFNLR--ALKYLVMDEADRILNMDFETEVDKI 217
Query: 559 VDCLPRRRQSLLFSATMPKELV-LKRE--HTYIDTVGLGSVETPVKIKQSCLVAPHELHF 615
+ +PR R++ LFSATM K++ L+R + +T K++Q L P +
Sbjct: 218 LKVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYLFIPSKFKD 277
Query: 616 QILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISE 675
L ++L E + G ++FCST T LLLR + ++ + Q R
Sbjct: 278 TYLVYILNE-LAGN---SFMIFCSTCNNTQRTALLLRNLGFTAIPLHGQMSQSKRLGSLN 333
Query: 676 EFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 717
+F+A R IL+ +DV++RG+D P V VV IP + YIH
Sbjct: 334 KFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIH 375
>UNIPROTKB|Q9H0S4 [details] [associations]
symbol:DDX47 "Probable ATP-dependent RNA helicase DDX47"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0006915 "apoptotic process" evidence=IDA]
[GO:0008380 "RNA splicing" evidence=IMP] [GO:0006364 "rRNA
processing" evidence=IMP] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0006915 GO:GO:0005730
GO:GO:0008380 GO:GO:0006397 GO:GO:0003676 GO:GO:0003723
EMBL:CH471094 UniGene:Hs.719938 GermOnline:ENSG00000178878
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268802 CTD:51202 HOVERGEN:HBG100512 KO:K14777
OMA:IFIPSKF EMBL:AF078843 EMBL:AL136666 EMBL:AK054574 EMBL:AK127712
EMBL:AC007215 EMBL:BC009379 EMBL:BC068009 IPI:IPI00023972
IPI:IPI00397372 RefSeq:NP_057439.2 RefSeq:NP_957518.1 PDB:3BER
PDBsum:3BER ProteinModelPortal:Q9H0S4 SMR:Q9H0S4 IntAct:Q9H0S4
MINT:MINT-3056694 STRING:Q9H0S4 PhosphoSite:Q9H0S4 DMDM:52782792
SWISS-2DPAGE:Q9H0S4 PaxDb:Q9H0S4 PRIDE:Q9H0S4 DNASU:51202
Ensembl:ENST00000352940 Ensembl:ENST00000358007 GeneID:51202
KEGG:hsa:51202 UCSC:uc001rav.3 GeneCards:GC12P012966
HGNC:HGNC:18682 HPA:HPA014855 neXtProt:NX_Q9H0S4
PharmGKB:PA134918403 InParanoid:Q9H0S4 PhylomeDB:Q9H0S4
ChiTaRS:DDX47 EvolutionaryTrace:Q9H0S4 GenomeRNAi:51202
NextBio:54238 ArrayExpress:Q9H0S4 Bgee:Q9H0S4 CleanEx:HS_DDX47
Genevestigator:Q9H0S4 Uniprot:Q9H0S4
Length = 455
Score = 446 (162.1 bits), Expect = 1.6e-41, P = 1.6e-41
Identities = 118/350 (33%), Positives = 188/350 (53%)
Query: 374 PILSQ---KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKS 430
PI+ + K F + G++ + +A G+ + T++Q + L+G+D + A+TG+GK+
Sbjct: 16 PIVEEEETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKT 75
Query: 431 IAFLLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTL 490
AF LP + A+L+ T Q ++ L+L PTRELA QI+ E L + G+ +
Sbjct: 76 GAFALPILNALLE-----TPQR---LFALVLTPTRELAFQIS-EQFEALGSSIGVQSAVI 126
Query: 491 VGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLG 550
VGG L P I++ATPGRL+DH+EN G ++R LK LV+DEAD +L++
Sbjct: 127 VGGIDSMSQSLALAKKP-HIIIATPGRLIDHLENTKGFNLR--ALKYLVMDEADRILNMD 183
Query: 551 FRKDVENIVDCLPRRRQSLLFSATMPKELV-LKRE--HTYIDTVGLGSVETPVKIKQSCL 607
F +V+ I+ +PR R++ LFSATM K++ L+R + +T K++Q +
Sbjct: 184 FETEVDKILKVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYI 243
Query: 608 VAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQ 667
P + L ++L E + G ++FCST T LLLR + ++ + Q
Sbjct: 244 FIPSKFKDTYLVYILNE-LAGN---SFMIFCSTCNNTQRTALLLRNLGFTAIPLHGQMSQ 299
Query: 668 LYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 717
R +F+A R IL+ +DV++RG+D P V VV IP + YIH
Sbjct: 300 SKRLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIH 349
>UNIPROTKB|I3L840 [details] [associations]
symbol:DDX18 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959
GeneTree:ENSGT00680000100037 EMBL:CU406995
Ensembl:ENSSSCT00000025310 Uniprot:I3L840
Length = 667
Score = 460 (167.0 bits), Expect = 2.0e-41, P = 2.0e-41
Identities = 121/357 (33%), Positives = 193/357 (54%)
Query: 390 TIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSST 449
T++A+ G+ MT +Q ++ LEG+D + AKTG+GK++AFL+PA+E ++K
Sbjct: 187 TLRAIKEMGFTNMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPAVELIVKLRFMPR 246
Query: 450 TQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQ 509
VLIL PTRELA Q L+ +H L ++GG+ + ++L ++
Sbjct: 247 NGTG----VLILSPTRELAMQTFGVLKELMTHHVHTYGL-IMGGSNRSAEAQKL-ANGIN 300
Query: 510 ILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQSL 569
I+VATPGRLLDH++N G + L+ LV+DEAD +LD+GF ++++ I+ LP RRQ++
Sbjct: 301 IVVATPGRLLDHMQNTPGFMYK--NLQCLVIDEADRILDVGFEEELKQIIKLLPTRRQTM 358
Query: 570 LFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILHHLLK 623
LFSAT ++ + LK+E Y+ + T ++Q +V P E F +L LK
Sbjct: 359 LFSATQTRKVEDLARISLKKEPLYVGVDDDKANATVDGLEQGYVVCPSEKRFLLLFTFLK 418
Query: 624 EHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEFRASKRL 683
++ K++VF S+ Y LL + + V ++ R+ Q R +F +
Sbjct: 419 KN----RKKKLMVFFSSCKSVKYHYELLNYIDLPVLAIHGRQKQNKRTTTFFQFCNADSG 474
Query: 684 ILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXXXXXXXVLLLAPWEE 740
IL+ +DV+ARG+D P+V +VQ P D ++YIH LL+ EE
Sbjct: 475 ILLCTDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTARGLNGRGHALLILRPEE 531
>SGD|S000004903 [details] [associations]
symbol:HAS1 "ATP-dependent RNA helicase" species:4932
"Saccharomyces cerevisiae" [GO:0008186 "RNA-dependent ATPase
activity" evidence=IDA] [GO:0030687 "preribosome, large subunit
precursor" evidence=IDA] [GO:0003723 "RNA binding"
evidence=IEA;IDA] [GO:0005730 "nucleolus" evidence=IEA;IDA]
[GO:0005635 "nuclear envelope" evidence=IDA] [GO:0006364 "rRNA
processing" evidence=IEA;IMP] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0030686 "90S preribosome"
evidence=IDA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 SGD:S000004903 GO:GO:0005524
GO:GO:0005635 GO:GO:0005730 GO:GO:0003723 EMBL:BK006946
GO:GO:0030687 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0030686 GO:GO:0006364 GO:GO:0004004 EMBL:X80836
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
InterPro:IPR025313 Pfam:PF13959 HOGENOM:HOG000268799 KO:K13179
OMA:KDGYRSY GeneTree:ENSGT00680000100037 OrthoDB:EOG4ZKNVS
PIR:S47451 RefSeq:NP_014017.1 ProteinModelPortal:Q03532 SMR:Q03532
DIP:DIP-4396N IntAct:Q03532 MINT:MINT-482816 STRING:Q03532
PaxDb:Q03532 PeptideAtlas:Q03532 EnsemblFungi:YMR290C GeneID:855335
KEGG:sce:YMR290C CYGD:YMR290c NextBio:979064 Genevestigator:Q03532
GermOnline:YMR290C Uniprot:Q03532
Length = 505
Score = 445 (161.7 bits), Expect = 2.1e-41, P = 2.1e-41
Identities = 119/349 (34%), Positives = 188/349 (53%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
++F+E +S T+KA+ G+ MT VQ T+ L G+D + AKTG+GK++AFL+PAI
Sbjct: 42 EKFEELKLSQPTLKAIEKMGFTTMTSVQARTIPPLLAGRDVLGAAKTGSGKTLAFLIPAI 101
Query: 439 EAV--LKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDG-IGVLTLVGGTR 495
E + LK + T ++ ++ PTRELA QI A L++ H G++ +GG
Sbjct: 102 ELLHSLKFKPRNGTGII------VITPTRELALQIFGVARELMEFHSQTFGIV--IGGAN 153
Query: 496 FKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDV 555
+ + +L +L+ATPGRLLDH++N G + LK L++DEAD +L++GF ++
Sbjct: 154 RRQEAEKLMKG-VNMLIATPGRLLDHLQNTKGFVFK--NLKALIIDEADRILEIGFEDEM 210
Query: 556 ENIVDCLPRR-RQSLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSCLV 608
I+ LP RQS+LFSAT + + L+ +I+ V T ++Q +V
Sbjct: 211 RQIIKILPNEDRQSMLFSATQTTKVEDLARISLRPGPLFINVVPETDNSTADGLEQGYVV 270
Query: 609 APHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQL 668
+ F +L LK + K+IVF S+ LL + + V E++ ++ Q
Sbjct: 271 CDSDKRFLLLFSFLKRN----QKKKIIVFLSSCNSVKYYAELLNYIDLPVLELHGKQKQQ 326
Query: 669 YRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 717
R EF ++R IL+ +DV+ARG+D P V ++Q P D YIH
Sbjct: 327 KRTNTFFEFCNAERGILICTDVAARGLDIPAVDWIIQFDPPDDPRDYIH 375
>UNIPROTKB|F1RY13 [details] [associations]
symbol:DDX18 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959
OMA:KDGYRSY GeneTree:ENSGT00680000100037 EMBL:CU406995
Ensembl:ENSSSCT00000017112 Uniprot:F1RY13
Length = 671
Score = 460 (167.0 bits), Expect = 2.2e-41, P = 2.2e-41
Identities = 121/357 (33%), Positives = 193/357 (54%)
Query: 390 TIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSST 449
T++A+ G+ MT +Q ++ LEG+D + AKTG+GK++AFL+PA+E ++K
Sbjct: 191 TLRAIKEMGFTNMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPAVELIVKLRFMPR 250
Query: 450 TQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQ 509
VLIL PTRELA Q L+ +H L ++GG+ + ++L ++
Sbjct: 251 NGTG----VLILSPTRELAMQTFGVLKELMTHHVHTYGL-IMGGSNRSAEAQKL-ANGIN 304
Query: 510 ILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQSL 569
I+VATPGRLLDH++N G + L+ LV+DEAD +LD+GF ++++ I+ LP RRQ++
Sbjct: 305 IVVATPGRLLDHMQNTPGFMYK--NLQCLVIDEADRILDVGFEEELKQIIKLLPTRRQTM 362
Query: 570 LFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILHHLLK 623
LFSAT ++ + LK+E Y+ + T ++Q +V P E F +L LK
Sbjct: 363 LFSATQTRKVEDLARISLKKEPLYVGVDDDKANATVDGLEQGYVVCPSEKRFLLLFTFLK 422
Query: 624 EHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEFRASKRL 683
++ K++VF S+ Y LL + + V ++ R+ Q R +F +
Sbjct: 423 KN----RKKKLMVFFSSCKSVKYHYELLNYIDLPVLAIHGRQKQNKRTTTFFQFCNADSG 478
Query: 684 ILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXXXXXXXVLLLAPWEE 740
IL+ +DV+ARG+D P+V +VQ P D ++YIH LL+ EE
Sbjct: 479 ILLCTDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTARGLNGRGHALLILRPEE 535
>ZFIN|ZDB-GENE-050522-359 [details] [associations]
symbol:zgc:112350 "zgc:112350" species:7955 "Danio
rerio" [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
ZFIN:ZDB-GENE-050522-359 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG100512 KO:K14777
EMBL:BC095776 IPI:IPI00488135 RefSeq:NP_001018522.1
UniGene:Dr.84733 ProteinModelPortal:Q502B4 SMR:Q502B4 GeneID:553715
KEGG:dre:553715 NextBio:20880445 Uniprot:Q502B4
Length = 512
Score = 430 (156.4 bits), Expect = 3.0e-41, Sum P(2) = 3.0e-41
Identities = 110/340 (32%), Positives = 181/340 (53%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F E G++ + +A G+ + T++Q + L+G+D + A+TG+GK+ AF +P +++
Sbjct: 81 FKELGVTEVLCEACDQLGWKKPTKIQIEAIPVALQGRDVIGLAETGSGKTGAFAVPVLQS 140
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+L ++ L+L PTRELA QIA E L + G+ +VGG
Sbjct: 141 LLACAQR--------LHTLVLTPTRELAFQIA-EQFDALGSSIGVKTAVIVGGIDMMSQA 191
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
L P +++ATPGRL+DH+EN G ++R LK LV+DEAD +L++ F +V+ I+
Sbjct: 192 LVLAKKP-HVVIATPGRLIDHMENTKGFNLR--ALKYLVMDEADRILNMDFESEVDKILK 248
Query: 561 CLPRRRQSLLFSATMPKELVLKREHTYIDTV--GLGSVETPV-KIKQSCLVAPHELHFQI 617
+PR R++ LFSATM K++ + D V + S V K++Q + P +
Sbjct: 249 VIPRDRRTFLFSATMTKKVQKLQRAALQDPVKCSVSSKYATVDKLQQFYIFIPSKYKDCY 308
Query: 618 LHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEF 677
L +L E + G +VFC T T + LLLR + + ++ + Q R +F
Sbjct: 309 LVSILNE-LAGN---SFMVFCGTCNNTQRVALLLRNLGITAIPLHGQMSQNKRLGALNKF 364
Query: 678 RASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 717
++ R +L+ +DV++RG+D P V V+ IP + YIH
Sbjct: 365 KSKSRSVLLATDVASRGLDIPHVDCVINFDIPTHSKDYIH 404
Score = 37 (18.1 bits), Expect = 3.0e-41, Sum P(2) = 3.0e-41
Identities = 9/23 (39%), Positives = 11/23 (47%)
Query: 76 TKLFDKADPDSETNQHKPMSPDE 98
T AD + ETN H P +E
Sbjct: 35 TNTHTPADTE-ETNTHTPADTEE 56
Score = 37 (18.1 bits), Expect = 3.0e-41, Sum P(2) = 3.0e-41
Identities = 9/23 (39%), Positives = 11/23 (47%)
Query: 76 TKLFDKADPDSETNQHKPMSPDE 98
T AD + ETN H P +E
Sbjct: 24 TNTHTPADTE-ETNTHTPADTEE 45
Score = 37 (18.1 bits), Expect = 3.0e-41, Sum P(2) = 3.0e-41
Identities = 9/23 (39%), Positives = 11/23 (47%)
Query: 76 TKLFDKADPDSETNQHKPMSPDE 98
T AD + ETN H P +E
Sbjct: 13 TNTHTPADTE-ETNTHTPADTEE 34
>UNIPROTKB|I3L7B7 [details] [associations]
symbol:DDX18 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005730 "nucleolus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005730 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959
GeneTree:ENSGT00680000100037 EMBL:CU406995
Ensembl:ENSSSCT00000025125 Uniprot:I3L7B7
Length = 696
Score = 460 (167.0 bits), Expect = 3.4e-41, P = 3.4e-41
Identities = 121/357 (33%), Positives = 193/357 (54%)
Query: 390 TIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSST 449
T++A+ G+ MT +Q ++ LEG+D + AKTG+GK++AFL+PA+E ++K
Sbjct: 216 TLRAIKEMGFTNMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPAVELIVKLRFMPR 275
Query: 450 TQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQ 509
VLIL PTRELA Q L+ +H L ++GG+ + ++L ++
Sbjct: 276 NGTG----VLILSPTRELAMQTFGVLKELMTHHVHTYGL-IMGGSNRSAEAQKL-ANGIN 329
Query: 510 ILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQSL 569
I+VATPGRLLDH++N G + L+ LV+DEAD +LD+GF ++++ I+ LP RRQ++
Sbjct: 330 IVVATPGRLLDHMQNTPGFMYK--NLQCLVIDEADRILDVGFEEELKQIIKLLPTRRQTM 387
Query: 570 LFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILHHLLK 623
LFSAT ++ + LK+E Y+ + T ++Q +V P E F +L LK
Sbjct: 388 LFSATQTRKVEDLARISLKKEPLYVGVDDDKANATVDGLEQGYVVCPSEKRFLLLFTFLK 447
Query: 624 EHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEFRASKRL 683
++ K++VF S+ Y LL + + V ++ R+ Q R +F +
Sbjct: 448 KN----RKKKLMVFFSSCKSVKYHYELLNYIDLPVLAIHGRQKQNKRTTTFFQFCNADSG 503
Query: 684 ILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXXXXXXXVLLLAPWEE 740
IL+ +DV+ARG+D P+V +VQ P D ++YIH LL+ EE
Sbjct: 504 ILLCTDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTARGLNGRGHALLILRPEE 560
>ASPGD|ASPL0000013201 [details] [associations]
symbol:AN4233 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0003723 EMBL:BN001302
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0008026 EMBL:AACD01000068 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268802 KO:K14777 OMA:IFIPSKF
RefSeq:XP_661837.1 ProteinModelPortal:Q5B5E7 SMR:Q5B5E7
STRING:Q5B5E7 EnsemblFungi:CADANIAT00004427 GeneID:2873652
KEGG:ani:AN4233.2 OrthoDB:EOG4ZPJ3P Uniprot:Q5B5E7
Length = 465
Score = 443 (161.0 bits), Expect = 3.5e-41, P = 3.5e-41
Identities = 119/342 (34%), Positives = 178/342 (52%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
K F E GI +A GY T +Q + LEG+D + A+TG+GK+ AF LP +
Sbjct: 46 KSFKELGIIDQLCEACENMGYKAPTPIQSQAIPLALEGRDVIGLAETGSGKTAAFALPML 105
Query: 439 EAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
+A+++A + ++ L+L PTRELA QI+ +A L + G+ +VGG
Sbjct: 106 QALMEAPQT--------LFGLVLAPTRELAYQIS-QAFETLGSTIGVRCAVIVGGMDMVA 156
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
L P I+VATPGRLLDH+EN G S+R LK L +DEAD LLD+ F + ++ I
Sbjct: 157 QSIALGKKP-HIIVATPGRLLDHLENTKGFSLR--NLKYLAIDEADRLLDMDFGESLDKI 213
Query: 559 VDCLPRRRQSLLFSATMPKELVLKREHTYIDTVGLG---SVETPVKIKQSCLVAPHELHF 615
+ LPR R + LFSATM ++ + + + V + +T ++ S + PH+
Sbjct: 214 IRILPRTRHTYLFSATMSTKVESLQRASLSNPVRVSVSSKYQTVSTLQSSYICIPHKHKN 273
Query: 616 QILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISE 675
L +LL E G I+F +T T + +LR + ++ + Q R
Sbjct: 274 LYLVYLLNE-FAGQ---SAIIFTTTVHETQRVAFMLRALGFGAIPLHGQLSQSARLGALG 329
Query: 676 EFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 717
+FR+ R ILV +DV+ARG+D P V V +P D + YIH
Sbjct: 330 KFRSRSRDILVATDVAARGLDIPSVDVVFNFDLPMDSKTYIH 371
>TIGR_CMR|CPS_2658 [details] [associations]
symbol:CPS_2658 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:CP000083
GenomeReviews:CP000083_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268807 RefSeq:YP_269372.1
ProteinModelPortal:Q480Z7 GeneID:3520428 KEGG:cps:CPS_2658
PATRIC:21468367 OMA:ERNFDSS BioCyc:CPSY167879:GI48-2720-MONOMER
Uniprot:Q480Z7
Length = 399
Score = 443 (161.0 bits), Expect = 3.5e-41, P = 3.5e-41
Identities = 127/339 (37%), Positives = 179/339 (52%)
Query: 391 IKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTT 450
I + GY Q T +Q+ + A + G D + A+TGTGK+ AF LP I K +
Sbjct: 14 IDRVNLKGYKQPTPIQKECIPALINGNDLLGIAQTGTGKTAAFSLPIIN---KFGRNKID 70
Query: 451 QLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLV--GGT--RFKVDQRRLESD 506
LIL PTRELASQI + DG+G+ T V GG + +VD L D
Sbjct: 71 IKAKSTRSLILTPTRELASQIMQN---IDDYSDGLGLKTKVVYGGVGRQAQVDSIELGLD 127
Query: 507 PCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRR 566
ILVATPGRLLD IE +G + L++ VLDEAD +LD+GF KDV++I+ LP+ R
Sbjct: 128 ---ILVATPGRLLDLIE--TG-DINFKALEVFVLDEADTMLDMGFFKDVQSIISKLPKSR 181
Query: 567 QSLLFSATMPKELVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILHHLLKEH- 625
Q+LLFSATMP E+ + E D P KI+ + +L Q ++HL K +
Sbjct: 182 QTLLFSATMPAEIEILAEAILTD---------PTKIQITAETVTIDLVNQSVYHLDKSNK 232
Query: 626 ------ILGTPDY-KVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEFR 678
IL DY KV++FC T ++ L + + ++S K Q R+ + F+
Sbjct: 233 VPLLFNILTKADYEKVLIFCKTKYGADIIVKALEKASITAASLHSGKTQAVREEALQNFK 292
Query: 679 ASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 717
S +LV +DV+ARG+D ++T V+ +P D YIH
Sbjct: 293 DSTLRVLVATDVAARGIDVDNITLVINYNLPEDPRNYIH 331
>ASPGD|ASPL0000044206 [details] [associations]
symbol:AN1949 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0030686 "90S
preribosome" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005635 "nuclear envelope" evidence=IEA] [GO:0030687
"preribosome, large subunit precursor" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005730 EMBL:BN001307
GO:GO:0003723 EMBL:AACD01000029 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959
HOGENOM:HOG000268799 KO:K13179 OMA:KDGYRSY RefSeq:XP_659553.1
ProteinModelPortal:Q5BBY1 STRING:Q5BBY1
EnsemblFungi:CADANIAT00008609 GeneID:2875602 KEGG:ani:AN1949.2
OrthoDB:EOG4ZKNVS Uniprot:Q5BBY1
Length = 609
Score = 446 (162.1 bits), Expect = 6.6e-41, P = 6.6e-41
Identities = 145/501 (28%), Positives = 237/501 (47%)
Query: 339 EDEHDFEE-QVELIRKEISXXXXXXXXXXXXXXXXXPILSQKRFDECGISPLTIKALTAA 397
EDE EE + + ++++ P K+F E G+S T++ +
Sbjct: 87 EDEEKKEEDEKDNVKEDSGKANVPDLPSVDAVSLPQPDGGPKKFTELGLSEKTLQGIKEM 146
Query: 398 GYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLVPPIY 457
G+ MT +Q+ T+ L G+D + AKTG+GK++AFL+PAIE +L A
Sbjct: 147 GFETMTEIQQRTIPPLLAGRDVLGAAKTGSGKTLAFLIPAIE-MLSALRFKPRNGTG--- 202
Query: 458 VLILCPTRELASQIAAEAIALLKNHDGI-GVLTLVGGTRFKVDQRRLESDPCQILVATPG 516
V+++ PTRELA QI A LL H G++ +GG + + +L +L+ATPG
Sbjct: 203 VIVVSPTRELALQIFGVARELLTAHSQTYGIV--IGGANRRAEAEKLTKG-VNLLIATPG 259
Query: 517 RLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRR-RQSLLFSATM 575
RLLDH++N G + LK LV+DEAD +L++GF ++ I+ LP RQ++LFSAT
Sbjct: 260 RLLDHLQNTPGFVFK--NLKTLVIDEADRILEVGFEDEMRQIIKILPNEDRQTMLFSATQ 317
Query: 576 PKE------LVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILHHLLKEHILGT 629
+ + L+ YI+ T ++Q ++ + F +L LK ++
Sbjct: 318 TTKVEDLARISLRPGPLYINVDHRKEHSTVEGLEQGYVICEADKRFLLLFSFLKRNL--- 374
Query: 630 PDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEFRASKRLILVTSD 689
K+IVF S+ LL + + V +++ ++ Q R EF +K+ +L+ +D
Sbjct: 375 -KKKIIVFFSSCNCVKYHAELLNYIDLPVLDLHGKQKQQKRTNTFFEFCNAKQGVLICTD 433
Query: 690 VSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXXXXXXXVLL-LAPWEEYFXXXXXX 748
V+ARG+D P V ++Q P D YIH L+ L P E F
Sbjct: 434 VAARGLDIPAVDWIIQFDPPDDTRDYIHRVGRTARGANGRGRSLMFLQPSEVGFLKYLKE 493
Query: 749 XXXXXXXXXXXNPEI---QLQMDNHMAK---IDNNVKEAAYHAWLGYY--NSIREI-GRD 799
+I Q Q++ +++ ++ + K+ Y ++L Y +S+R +
Sbjct: 494 ARVPVVEFDFPAKKIVNVQSQLEKLISQNYYLNKSAKDG-YRSYLQAYASHSLRSVFDVH 552
Query: 800 KTTLVELANKFAQSIGLQRPP 820
K LV K A+S G PP
Sbjct: 553 KLDLV----KVAKSFGFSTPP 569
>UNIPROTKB|A4RGU2 [details] [associations]
symbol:DBP4 "ATP-dependent RNA helicase DBP4"
species:242507 "Magnaporthe oryzae 70-15" [GO:0043581 "mycelium
development" evidence=IEP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0003723 GO:GO:0043581 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:CM001232 GO:GO:0006364 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K14776
InterPro:IPR025313 Pfam:PF13959 OrthoDB:EOG4R53B0
RefSeq:XP_003715000.1 ProteinModelPortal:A4RGU2 STRING:A4RGU2
EnsemblFungi:MGG_08049T0 GeneID:2678339 KEGG:mgr:MGG_08049
Uniprot:A4RGU2
Length = 798
Score = 458 (166.3 bits), Expect = 1.4e-40, P = 1.4e-40
Identities = 120/369 (32%), Positives = 189/369 (51%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
K F E +S T K + + + +T +Q + L+G+D + AKTG+GK++AFL+P +
Sbjct: 49 KAFAELPLSEPTAKGVRDSHFETLTDIQARAIPLALKGRDILGAAKTGSGKTLAFLVPLL 108
Query: 439 EAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
E + + + +L L+L PTRELA Q + + + H ++GG +
Sbjct: 109 EKLYREQWTQEAKLG----ALVLSPTRELAVQ-TFQVLRKIGRHHLFSAGLVIGGKSVRE 163
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
+ L IL+ TPGR+L H++ G V L++LVLDEAD ++DLGF++DV+ +
Sbjct: 164 EAEALSR--MNILIGTPGRILQHLDQTHGFDVD--NLQLLVLDEADRIMDLGFQRDVDAL 219
Query: 559 VDCLPRRRQSLLFSATMPKELV-LKR----EHTYIDTVGLGSVETPVKIKQSCLVAPHEL 613
V LP RQ+LLFSAT K++ L R + Y+ + TP ++Q +V P
Sbjct: 220 VQHLPTTRQTLLFSATQSKKVSDLARLSLKDPEYVSVHAEATTATPSTLQQHYIVTPLPE 279
Query: 614 HFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVR--EMYSRKPQLYRD 671
L +K ++ K++VF S+G +Y R+M+ + M+ R+ QL R
Sbjct: 280 KLDTLWGFIKANLKS----KMVVFLSSGKQVRFVYESFRQMQPGIPLLHMHGRQKQLARL 335
Query: 672 RISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXXXXXXX 731
+++ F +SK L +DV ARG+D+ V VVQV P D + YIH
Sbjct: 336 DVTKRFDSSKHACLFATDVIARGIDFTGVDWVVQVDAPEDTDDYIHRVGRTARYEREGKA 395
Query: 732 VLLLAPWEE 740
V+ L P EE
Sbjct: 396 VIFLDPSEE 404
>UNIPROTKB|Q9KNA4 [details] [associations]
symbol:VC_A0061 "ATP-dependent RNA helicase, DEAD box
family" species:243277 "Vibrio cholerae O1 biovar El Tor str.
N16961" [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0016070 "RNA metabolic process" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:AE003853
GenomeReviews:AE003853_GR GO:GO:0016070 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 InterPro:IPR014014
PROSITE:PS51195 HSSP:P10081 OMA:PKFIVAT ProtClustDB:CLSK869483
PIR:C82506 RefSeq:NP_232462.1 ProteinModelPortal:Q9KNA4
DNASU:2612119 GeneID:2612119 KEGG:vch:VCA0061 PATRIC:20084709
Uniprot:Q9KNA4
Length = 452
Score = 437 (158.9 bits), Expect = 1.6e-40, P = 1.6e-40
Identities = 121/377 (32%), Positives = 190/377 (50%)
Query: 377 SQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLP 436
S +F + G+ +K L + Q T +Q+ + + G+D + +KTG+GK++AF+LP
Sbjct: 3 STLQFKDLGLDNRLLKNLAHYNFKQATEIQQQAIPLTIAGRDLLASSKTGSGKTLAFVLP 62
Query: 437 AIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRF 496
+ LK + S P LIL PTRELA Q+ E ++L L + GG F
Sbjct: 63 MLHKSLKTKAFSAKD---P-RGLILVPTRELAKQVYGELRSMLGGLSYTATL-ITGGENF 117
Query: 497 KVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVE 556
+ L P + +VATPGRL DH++++S + L GL+ LVLDEAD +LDLGF K++
Sbjct: 118 NDQVKALARGP-RFIVATPGRLADHLDHRS---LFLEGLETLVLDEADRMLDLGFAKELR 173
Query: 557 NIVDCLP-RRRQSLLFSATMPKELVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHE--- 612
I + RRRQ+L+FSAT+ +H ++ + + + P +I H+
Sbjct: 174 RIHNAAKHRRRQTLMFSATL--------DHADVNDMAMELLNEPKRIAIGVGSEEHKDIT 225
Query: 613 LHFQILHHL-----LKEHILGTPDYK-VIVFCSTGMVTSLLYLLLREMKMNVREMYSRKP 666
HF + HL L + IL +Y+ VI+F +T T L L + + +
Sbjct: 226 QHFYLCDHLDHKEALLDRILADAEYRQVIIFTATRADTDRLTEKLNQNNLKAVALSGNLN 285
Query: 667 QLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXX 726
Q R+ I +F + ILVT+DV++RG+D P VT V+ +P E+Y+H
Sbjct: 286 QTQRNTIMGQFERAVFKILVTTDVASRGLDIPAVTHVINFDMPKHTEEYVHRVGRTGRAG 345
Query: 727 XXXXXVLLLAP--WEEY 741
+ L+ P WE +
Sbjct: 346 NKGDAMSLVGPKDWESF 362
>TIGR_CMR|VC_A0061 [details] [associations]
symbol:VC_A0061 "ATP-dependent RNA helicase, DEAD box
family" species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE003853 GenomeReviews:AE003853_GR GO:GO:0016070
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 OMA:PKFIVAT
ProtClustDB:CLSK869483 PIR:C82506 RefSeq:NP_232462.1
ProteinModelPortal:Q9KNA4 DNASU:2612119 GeneID:2612119
KEGG:vch:VCA0061 PATRIC:20084709 Uniprot:Q9KNA4
Length = 452
Score = 437 (158.9 bits), Expect = 1.6e-40, P = 1.6e-40
Identities = 121/377 (32%), Positives = 190/377 (50%)
Query: 377 SQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLP 436
S +F + G+ +K L + Q T +Q+ + + G+D + +KTG+GK++AF+LP
Sbjct: 3 STLQFKDLGLDNRLLKNLAHYNFKQATEIQQQAIPLTIAGRDLLASSKTGSGKTLAFVLP 62
Query: 437 AIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRF 496
+ LK + S P LIL PTRELA Q+ E ++L L + GG F
Sbjct: 63 MLHKSLKTKAFSAKD---P-RGLILVPTRELAKQVYGELRSMLGGLSYTATL-ITGGENF 117
Query: 497 KVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVE 556
+ L P + +VATPGRL DH++++S + L GL+ LVLDEAD +LDLGF K++
Sbjct: 118 NDQVKALARGP-RFIVATPGRLADHLDHRS---LFLEGLETLVLDEADRMLDLGFAKELR 173
Query: 557 NIVDCLP-RRRQSLLFSATMPKELVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHE--- 612
I + RRRQ+L+FSAT+ +H ++ + + + P +I H+
Sbjct: 174 RIHNAAKHRRRQTLMFSATL--------DHADVNDMAMELLNEPKRIAIGVGSEEHKDIT 225
Query: 613 LHFQILHHL-----LKEHILGTPDYK-VIVFCSTGMVTSLLYLLLREMKMNVREMYSRKP 666
HF + HL L + IL +Y+ VI+F +T T L L + + +
Sbjct: 226 QHFYLCDHLDHKEALLDRILADAEYRQVIIFTATRADTDRLTEKLNQNNLKAVALSGNLN 285
Query: 667 QLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXX 726
Q R+ I +F + ILVT+DV++RG+D P VT V+ +P E+Y+H
Sbjct: 286 QTQRNTIMGQFERAVFKILVTTDVASRGLDIPAVTHVINFDMPKHTEEYVHRVGRTGRAG 345
Query: 727 XXXXXVLLLAP--WEEY 741
+ L+ P WE +
Sbjct: 346 NKGDAMSLVGPKDWESF 362
>UNIPROTKB|Q0C4B9 [details] [associations]
symbol:HNE_0695 "Putative ATP-dependent RNA helicase RhlE"
species:228405 "Hyphomonas neptunium ATCC 15444" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:CP000158
GenomeReviews:CP000158_GR GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807
RefSeq:YP_759424.1 ProteinModelPortal:Q0C4B9 STRING:Q0C4B9
GeneID:4287361 KEGG:hne:HNE_0695 PATRIC:32214196 OMA:LPMITIL
BioCyc:HNEP228405:GI69-738-MONOMER Uniprot:Q0C4B9
Length = 536
Score = 436 (158.5 bits), Expect = 2.1e-40, P = 2.1e-40
Identities = 117/347 (33%), Positives = 180/347 (51%)
Query: 376 LSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLL 435
+++ F + G++ +KA+T +GY T +Q + L G D A+TGTGK+ AF+L
Sbjct: 1 MTETTFADFGLAENILKAVTESGYTIPTPIQREAIPHILMGGDVTGVAQTGTGKTAAFVL 60
Query: 436 PAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTR 495
P I+ + +T + ++ P LILCPTRELA+Q+A E + + + L+GG
Sbjct: 61 PMIQRL--STGRARARM--P-RCLILCPTRELAAQVA-ENFEKYGKYLKLTMALLIGGVS 114
Query: 496 FKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDV 555
FK +Q L +L+ATPGRL+D + L +MG++ L++DEAD +LD+GF D+
Sbjct: 115 FK-EQETLLQRGVDVLIATPGRLMDQFDRGKLL---MMGVETLIIDEADRMLDMGFIPDI 170
Query: 556 ENIVDCLPRRRQSLLFSATMPKEL-----VLKREHTYIDTVGLGSVETPVKIKQSCLVAP 610
E I LP RQ+LLFSAT P ++ +++ I+ +T I Q + P
Sbjct: 171 EKICAKLPANRQTLLFSATFPTDIQRLAKTFQKDPKKIEVTR--PAQTAETISQFVVKLP 228
Query: 611 HELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYR 670
+ L+ I T IVFC+ + ++ L + + ++ PQ R
Sbjct: 229 TN-DGKARRTALRRVIEATNVKNGIVFCNRKVEVDIVAASLTKHGHDAAPIHGDLPQSVR 287
Query: 671 DRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 717
+ FR K +LV SDV+ARG+D PDV V G PP E Y+H
Sbjct: 288 SETLQRFRDGKLKLLVASDVAARGLDIPDVGHVFNFGPPPKDEDYVH 334
>UNIPROTKB|Q8ECL2 [details] [associations]
symbol:SO_3125 "ATP-dependent RNA helicase DEAD box family"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
ProtClustDB:CLSK907013 RefSeq:NP_718686.1 ProteinModelPortal:Q8ECL2
GeneID:1170814 KEGG:son:SO_3125 PATRIC:23525896 OMA:AHLIKQH
Uniprot:Q8ECL2
Length = 427
Score = 434 (157.8 bits), Expect = 3.4e-40, P = 3.4e-40
Identities = 117/366 (31%), Positives = 192/366 (52%)
Query: 381 FDECGI-SPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIE 439
F E GI +PL + LT GY+ T VQ AT+ A L G+D + A TG+GK+ AF LP ++
Sbjct: 11 FAELGIIAPLGNR-LTELGYVSPTPVQAATIPAVLSGRDVLAGANTGSGKTAAFALPLLQ 69
Query: 440 AVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDG-IGVLTLVGGTRFKV 498
+ +A S+ + V + L+L PTRELA Q+A ++ + +G + ++ GG +
Sbjct: 70 RLSEAKSADKSAGV--VRCLVLVPTRELAQQVADSFLSYASHFNGQLKIVAAFGGVSVNL 127
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
+ L + +LVATPGRLLD + + + ++L + VLDEAD +L LGF +++E +
Sbjct: 128 QMQSLRAG-ADVLVATPGRLLDLLASNA---LKLTQVSAFVLDEADRMLSLGFTEELEQV 183
Query: 559 VDCLPRRRQSLLFSATMPKE---LVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHF 615
+ LPR++Q+LLFSAT P+E L K H ++ L S E I+Q + E
Sbjct: 184 LAALPRQKQTLLFSATFPEEVRALTTKLLHQPLE-YHLQS-EQESTIEQRVITVNREQKT 241
Query: 616 QILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISE 675
+L HL+K+H + ++F S + L L + ++ + K Q R R+ +
Sbjct: 242 ALLAHLIKQHQWS----QALIFVSAKNTCNHLAQKLSKRGISAEVFHGDKAQGARTRVLD 297
Query: 676 EFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXXXXXXXVLLL 735
F+ + +L+ +D++ARG+D + V+ +P Y+H V L+
Sbjct: 298 GFKNGEISVLIATDIAARGIDIDKLPVVINFDLPRSPADYMHRIGRSGRAGEAGLAVTLI 357
Query: 736 APWEEY 741
+ EEY
Sbjct: 358 SH-EEY 362
>TIGR_CMR|SO_3125 [details] [associations]
symbol:SO_3125 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
ProtClustDB:CLSK907013 RefSeq:NP_718686.1 ProteinModelPortal:Q8ECL2
GeneID:1170814 KEGG:son:SO_3125 PATRIC:23525896 OMA:AHLIKQH
Uniprot:Q8ECL2
Length = 427
Score = 434 (157.8 bits), Expect = 3.4e-40, P = 3.4e-40
Identities = 117/366 (31%), Positives = 192/366 (52%)
Query: 381 FDECGI-SPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIE 439
F E GI +PL + LT GY+ T VQ AT+ A L G+D + A TG+GK+ AF LP ++
Sbjct: 11 FAELGIIAPLGNR-LTELGYVSPTPVQAATIPAVLSGRDVLAGANTGSGKTAAFALPLLQ 69
Query: 440 AVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDG-IGVLTLVGGTRFKV 498
+ +A S+ + V + L+L PTRELA Q+A ++ + +G + ++ GG +
Sbjct: 70 RLSEAKSADKSAGV--VRCLVLVPTRELAQQVADSFLSYASHFNGQLKIVAAFGGVSVNL 127
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
+ L + +LVATPGRLLD + + + ++L + VLDEAD +L LGF +++E +
Sbjct: 128 QMQSLRAG-ADVLVATPGRLLDLLASNA---LKLTQVSAFVLDEADRMLSLGFTEELEQV 183
Query: 559 VDCLPRRRQSLLFSATMPKE---LVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHF 615
+ LPR++Q+LLFSAT P+E L K H ++ L S E I+Q + E
Sbjct: 184 LAALPRQKQTLLFSATFPEEVRALTTKLLHQPLE-YHLQS-EQESTIEQRVITVNREQKT 241
Query: 616 QILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISE 675
+L HL+K+H + ++F S + L L + ++ + K Q R R+ +
Sbjct: 242 ALLAHLIKQHQWS----QALIFVSAKNTCNHLAQKLSKRGISAEVFHGDKAQGARTRVLD 297
Query: 676 EFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXXXXXXXVLLL 735
F+ + +L+ +D++ARG+D + V+ +P Y+H V L+
Sbjct: 298 GFKNGEISVLIATDIAARGIDIDKLPVVINFDLPRSPADYMHRIGRSGRAGEAGLAVTLI 357
Query: 736 APWEEY 741
+ EEY
Sbjct: 358 SH-EEY 362
>TAIR|locus:2152099 [details] [associations]
symbol:AT5G65900 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:CP002688 GenomeReviews:BA000015_GR
EMBL:AL021684 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959
HOGENOM:HOG000268799 KO:K13179 EMBL:AB018108 EMBL:AY059930
EMBL:BT001188 EMBL:AJ012745 IPI:IPI00526354 PIR:T05883 PIR:T51352
RefSeq:NP_201391.1 UniGene:At.19658 UniGene:At.66704
ProteinModelPortal:Q9SB89 SMR:Q9SB89 PaxDb:Q9SB89 PRIDE:Q9SB89
EnsemblPlants:AT5G65900.1 GeneID:836719 KEGG:ath:AT5G65900
GeneFarm:951 TAIR:At5g65900 InParanoid:Q9SB89 OMA:HLENTNG
PhylomeDB:Q9SB89 ProtClustDB:CLSN2916378 Genevestigator:Q9SB89
GermOnline:AT5G65900 Uniprot:Q9SB89
Length = 633
Score = 446 (162.1 bits), Expect = 4.6e-40, P = 4.6e-40
Identities = 150/470 (31%), Positives = 227/470 (48%)
Query: 375 ILSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFL 434
I++ K F+ +S T K++ G+ +MT++Q + + G+D + A+TG+GK++AFL
Sbjct: 150 IMTNKTFESLSLSDNTYKSIKEMGFARMTQIQAKAIPPLMMGEDVLGAARTGSGKTLAFL 209
Query: 435 LPAIEAV--LKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVG 492
+PA+E + +K T + T VL++CPTRELA Q A LLK H V ++G
Sbjct: 210 IPAVELLYRVKFTPRNGTG------VLVICPTRELAIQSYGVAKELLKYHSQT-VGKVIG 262
Query: 493 GTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFR 552
G + K + L +LVATPGRLLDH+EN +G + LK LV+DEAD +L+ F
Sbjct: 263 GEKRKTEAEILAKG-VNLLVATPGRLLDHLENTNGFIFK--NLKFLVMDEADRILEQNFE 319
Query: 553 KDVENIVDCLPRRRQSLLFSATMPKELV-LKR----EHTYIDTVGLGSVE-TPVKIKQSC 606
+D++ I++ LP+ RQ+ LFSAT ++ L R YID V G E T ++Q
Sbjct: 320 EDLKKILNLLPKTRQTSLFSATQSAKVEDLARVSLTSPVYID-VDEGRKEVTNEGLEQGY 378
Query: 607 LVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKP 666
V P + L LK G K++VF ST T L R +K + E+
Sbjct: 379 CVVPSAMRLLFLLTFLKR-FQGKK--KIMVFFSTCKSTKFHAELFRYIKFDCLEIRGGID 435
Query: 667 QLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXX 726
Q R +F ++ IL+ ++V+ARG+D+P V +VQ P + YIH
Sbjct: 436 QNKRTPTFLQFIKAETGILLCTNVAARGLDFPHVDWIVQYDPPDNPTDYIHRVGRTARGE 495
Query: 727 XXXXXVLL-LAPWEEYFXXXXXXXXXXXXXXXXXNPEIQLQMDNHMAK-IDNN--VKEAA 782
LL L P E F ++ L + + I N +KE+A
Sbjct: 496 GAKGKALLVLTPQELKFIQYLKAAKIPVEEHEFEEKKL-LDVKPFVENLISENYALKESA 554
Query: 783 YHAWLGYYNSIREIG-RDKTTLVEL-ANKFAQSIGLQRPPPLFRKTALKM 830
A+ Y + +D + +L + A S G PP K ALK+
Sbjct: 555 KEAYKTYISGYDSHSMKDVFNVHQLNLTEVATSFGFSDPP----KVALKI 600
>UNIPROTKB|Q8EDC4 [details] [associations]
symbol:SO_2838 "ATP-dependent RNA helicase DEAD box family"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
ProtClustDB:CLSK869483 RefSeq:NP_718410.1 ProteinModelPortal:Q8EDC4
GeneID:1170534 KEGG:son:SO_2838 PATRIC:23525314 OMA:LAGHDIF
Uniprot:Q8EDC4
Length = 449
Score = 432 (157.1 bits), Expect = 5.7e-40, P = 5.7e-40
Identities = 116/374 (31%), Positives = 194/374 (51%)
Query: 380 RFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIE 439
+F + + +++L G T +QE L L GKD + +KTG+GK++AFLLPA++
Sbjct: 2 QFTDFSLDQRLLQSLKHMGIATPTAIQEQALPIALAGKDLMASSKTGSGKTLAFLLPALQ 61
Query: 440 AVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVD 499
V+ + S P VLIL PTRELA Q+ ++ L+ N ++++GG F
Sbjct: 62 RVISTRALSKRD--PR--VLILLPTRELAHQVYSQLRLLVANTQ-YKAISVLGGENFNDQ 116
Query: 500 QRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIV 559
+ L +P +VATPGR+ DH+E K+ + L GL++L+LDEAD +LDLGF ++ I
Sbjct: 117 AKALAKEP-HFIVATPGRIADHLEQKN---LFLNGLELLILDEADRMLDLGFAPQLKAIN 172
Query: 560 DCLP-RRRQSLLFSATMPKELVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQIL 618
+ +RRQ+L+FSAT+ +H+ I+ + ++ P+ + A H+ Q +
Sbjct: 173 EAADHKRRQTLMFSATL--------DHSEINEIAAALLKNPLHVAIGTAHAEHQDISQRI 224
Query: 619 H---HL-----LKEHILGTPDYK-VIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLY 669
+ HL L +L +K VI+F +T T L L + Q
Sbjct: 225 YLCDHLDHKEALLSRLLSDESHKQVIIFTATRADTERLAAKLSAQGFATAALSGELKQAA 284
Query: 670 RDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXXXXX 729
R++I ++F ++ ILVT+DV++RG+D +V+ V+ +P E+Y+H
Sbjct: 285 RNQIMDQFARGQQQILVTTDVASRGLDLLNVSLVINFDMPKFAEEYVHRIGRTGRAGAKG 344
Query: 730 XXVLLLAP--WEEY 741
+ L+ P W+ +
Sbjct: 345 DAISLVGPKDWDSF 358
>TIGR_CMR|SO_2838 [details] [associations]
symbol:SO_2838 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
ProtClustDB:CLSK869483 RefSeq:NP_718410.1 ProteinModelPortal:Q8EDC4
GeneID:1170534 KEGG:son:SO_2838 PATRIC:23525314 OMA:LAGHDIF
Uniprot:Q8EDC4
Length = 449
Score = 432 (157.1 bits), Expect = 5.7e-40, P = 5.7e-40
Identities = 116/374 (31%), Positives = 194/374 (51%)
Query: 380 RFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIE 439
+F + + +++L G T +QE L L GKD + +KTG+GK++AFLLPA++
Sbjct: 2 QFTDFSLDQRLLQSLKHMGIATPTAIQEQALPIALAGKDLMASSKTGSGKTLAFLLPALQ 61
Query: 440 AVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVD 499
V+ + S P VLIL PTRELA Q+ ++ L+ N ++++GG F
Sbjct: 62 RVISTRALSKRD--PR--VLILLPTRELAHQVYSQLRLLVANTQ-YKAISVLGGENFNDQ 116
Query: 500 QRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIV 559
+ L +P +VATPGR+ DH+E K+ + L GL++L+LDEAD +LDLGF ++ I
Sbjct: 117 AKALAKEP-HFIVATPGRIADHLEQKN---LFLNGLELLILDEADRMLDLGFAPQLKAIN 172
Query: 560 DCLP-RRRQSLLFSATMPKELVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQIL 618
+ +RRQ+L+FSAT+ +H+ I+ + ++ P+ + A H+ Q +
Sbjct: 173 EAADHKRRQTLMFSATL--------DHSEINEIAAALLKNPLHVAIGTAHAEHQDISQRI 224
Query: 619 H---HL-----LKEHILGTPDYK-VIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLY 669
+ HL L +L +K VI+F +T T L L + Q
Sbjct: 225 YLCDHLDHKEALLSRLLSDESHKQVIIFTATRADTERLAAKLSAQGFATAALSGELKQAA 284
Query: 670 RDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXXXXX 729
R++I ++F ++ ILVT+DV++RG+D +V+ V+ +P E+Y+H
Sbjct: 285 RNQIMDQFARGQQQILVTTDVASRGLDLLNVSLVINFDMPKFAEEYVHRIGRTGRAGAKG 344
Query: 730 XXVLLLAP--WEEY 741
+ L+ P W+ +
Sbjct: 345 DAISLVGPKDWDSF 358
>FB|FBgn0032919 [details] [associations]
symbol:CG9253 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
EMBL:AY121677 ProteinModelPortal:Q8MRB7 SMR:Q8MRB7 STRING:Q8MRB7
PaxDb:Q8MRB7 PRIDE:Q8MRB7 FlyBase:FBgn0032919 InParanoid:Q8MRB7
OrthoDB:EOG4V41Q7 ArrayExpress:Q8MRB7 Bgee:Q8MRB7 Uniprot:Q8MRB7
Length = 507
Score = 428 (155.7 bits), Expect = 1.6e-39, P = 1.6e-39
Identities = 112/360 (31%), Positives = 186/360 (51%)
Query: 383 ECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVL 442
+ G++ +A + +++Q + L+GKD + A+TG+GK+ AF LP + A+L
Sbjct: 65 DLGLNEALCQACDELKWKAPSKIQREAIPVALQGKDVIGLAETGSGKTGAFALPILHALL 124
Query: 443 KATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRR 502
+ + L+L PTRELA QI E L + GI +VGG +
Sbjct: 125 ENPQR--------YFALVLTPTRELAFQIG-EQFEALGSGIGIKCCVVVGGMDMVAQGLQ 175
Query: 503 LESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCL 562
L P I++ATPGRL+DH+EN G +++ +K LV+DEAD +L++ F +++ I+ L
Sbjct: 176 LAKKP-HIIIATPGRLVDHLENMKGFNLK--AIKYLVMDEADRILNMDFEVELDKILKVL 232
Query: 563 PRRRQSLLFSATMPKELVLKREHTYIDTVGL---GSVETPVKIKQSCLVAPHELHFQILH 619
PR R++ LFSATM K++ + + D V + +T +++QS L P + L
Sbjct: 233 PRERRTFLFSATMTKKVKKLQRASLKDPVKVEVSNKYQTVEQLQQSYLFIPVKYKDVYLV 292
Query: 620 HLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEFRA 679
H+L E + G ++FCST T L+LR + + ++ + Q R +F+A
Sbjct: 293 HILNE-LAGN---SFMIFCSTCNNTVKTALMLRALGLAAIPLHGQMSQNKRLAALNKFKA 348
Query: 680 SKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXXXXXXXVLLLAPWE 739
R IL+++DV++RG+D P V VV IP + YIH + L++ ++
Sbjct: 349 KNRSILISTDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKAITLVSQYD 408
>UNIPROTKB|Q81JK1 [details] [associations]
symbol:BAS5307 "ATP-dependent RNA helicase, DEAD/DEAH box
family" species:1392 "Bacillus anthracis" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 HOGENOM:HOG000268809
InterPro:IPR005580 Pfam:PF03880 OMA:ENRFLEE RefSeq:NP_847849.1
RefSeq:YP_022388.1 RefSeq:YP_031544.1 ProteinModelPortal:Q81JK1
SMR:Q81JK1 IntAct:Q81JK1 DNASU:1085452
EnsemblBacteria:EBBACT00000008202 EnsemblBacteria:EBBACT00000014623
EnsemblBacteria:EBBACT00000021322 GeneID:1085452 GeneID:2819774
GeneID:2852974 KEGG:ban:BA_5703 KEGG:bar:GBAA_5703 KEGG:bat:BAS5307
ProtClustDB:CLSK883265 BioCyc:BANT260799:GJAJ-5380-MONOMER
BioCyc:BANT261594:GJ7F-5556-MONOMER Uniprot:Q81JK1
Length = 481
Score = 427 (155.4 bits), Expect = 2.0e-39, P = 2.0e-39
Identities = 124/375 (33%), Positives = 191/375 (50%)
Query: 376 LSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLL 435
+S+K F +S +ALT GY T VQ + L+ KD VVK++TG+GK+ +F +
Sbjct: 1 MSKKSFSNYALSKEVRRALTGLGYEHPTEVQGEVIPVALQKKDLVVKSQTGSGKTASFGI 60
Query: 436 PAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTR 495
P E V + Q L+L PTRELA Q+ E I + I + G +
Sbjct: 61 PLCEMV--EWEENKPQ------ALVLTPTRELAVQVK-EDITNIGRFKRIKAAAIYGKSP 111
Query: 496 FKVDQRRLE-SDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKD 554
F +++LE I+V TPGR+LDHIE K LS L LK LV+DEAD +L++GF
Sbjct: 112 FA--RQKLELKQKTHIVVGTPGRVLDHIE-KGTLS--LERLKYLVIDEADEMLNMGFIDQ 166
Query: 555 VENIVDCLPRRRQSLLFSATMPKELVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELH 614
VE I+D LP +R ++LFSAT+P++ V + TY++ T ++IK + + H
Sbjct: 167 VEAIIDELPTKRMTMLFSATLPED-VERLSRTYMNA------PTHIEIKAAGITTDKIEH 219
Query: 615 --FQILHH----LLKE-HILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQ 667
F++ LLK+ + PD I+FC T +Y L + +++ Q
Sbjct: 220 TLFEVREEEKLSLLKDVTTIENPD-SCIIFCRTQENVDHVYRQLDRVNYPCDKIHGGMVQ 278
Query: 668 LYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXXX 727
R + ++FR K LV +DV+ARG+D ++T V+ IP ++E Y+H
Sbjct: 279 EDRFGVMDDFRKGKFRYLVATDVAARGIDIDNITHVINYDIPLEKESYVHRTGRTGRAGN 338
Query: 728 XXXXVLLLAPWEEYF 742
+ + P+E+ F
Sbjct: 339 SGKAITFITPYEDRF 353
>TIGR_CMR|BA_5703 [details] [associations]
symbol:BA_5703 "ATP-dependent RNA helicase, DEAD/DEAH box
family" species:198094 "Bacillus anthracis str. Ames" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 HOGENOM:HOG000268809
InterPro:IPR005580 Pfam:PF03880 OMA:ENRFLEE RefSeq:NP_847849.1
RefSeq:YP_022388.1 RefSeq:YP_031544.1 ProteinModelPortal:Q81JK1
SMR:Q81JK1 IntAct:Q81JK1 DNASU:1085452
EnsemblBacteria:EBBACT00000008202 EnsemblBacteria:EBBACT00000014623
EnsemblBacteria:EBBACT00000021322 GeneID:1085452 GeneID:2819774
GeneID:2852974 KEGG:ban:BA_5703 KEGG:bar:GBAA_5703 KEGG:bat:BAS5307
ProtClustDB:CLSK883265 BioCyc:BANT260799:GJAJ-5380-MONOMER
BioCyc:BANT261594:GJ7F-5556-MONOMER Uniprot:Q81JK1
Length = 481
Score = 427 (155.4 bits), Expect = 2.0e-39, P = 2.0e-39
Identities = 124/375 (33%), Positives = 191/375 (50%)
Query: 376 LSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLL 435
+S+K F +S +ALT GY T VQ + L+ KD VVK++TG+GK+ +F +
Sbjct: 1 MSKKSFSNYALSKEVRRALTGLGYEHPTEVQGEVIPVALQKKDLVVKSQTGSGKTASFGI 60
Query: 436 PAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTR 495
P E V + Q L+L PTRELA Q+ E I + I + G +
Sbjct: 61 PLCEMV--EWEENKPQ------ALVLTPTRELAVQVK-EDITNIGRFKRIKAAAIYGKSP 111
Query: 496 FKVDQRRLE-SDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKD 554
F +++LE I+V TPGR+LDHIE K LS L LK LV+DEAD +L++GF
Sbjct: 112 FA--RQKLELKQKTHIVVGTPGRVLDHIE-KGTLS--LERLKYLVIDEADEMLNMGFIDQ 166
Query: 555 VENIVDCLPRRRQSLLFSATMPKELVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELH 614
VE I+D LP +R ++LFSAT+P++ V + TY++ T ++IK + + H
Sbjct: 167 VEAIIDELPTKRMTMLFSATLPED-VERLSRTYMNA------PTHIEIKAAGITTDKIEH 219
Query: 615 --FQILHH----LLKE-HILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQ 667
F++ LLK+ + PD I+FC T +Y L + +++ Q
Sbjct: 220 TLFEVREEEKLSLLKDVTTIENPD-SCIIFCRTQENVDHVYRQLDRVNYPCDKIHGGMVQ 278
Query: 668 LYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXXX 727
R + ++FR K LV +DV+ARG+D ++T V+ IP ++E Y+H
Sbjct: 279 EDRFGVMDDFRKGKFRYLVATDVAARGIDIDNITHVINYDIPLEKESYVHRTGRTGRAGN 338
Query: 728 XXXXVLLLAPWEEYF 742
+ + P+E+ F
Sbjct: 339 SGKAITFITPYEDRF 353
>CGD|CAL0000056 [details] [associations]
symbol:orf19.7546 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0000462 "maturation of SSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0008186 "RNA-dependent ATPase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0003723
EMBL:AACQ01000032 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K14777 EMBL:AR550432 RefSeq:XP_719308.1
ProteinModelPortal:Q5ACU6 SMR:Q5ACU6 STRING:Q5ACU6 GeneID:3639008
KEGG:cal:CaO19.7546 Uniprot:Q5ACU6
Length = 539
Score = 426 (155.0 bits), Expect = 2.6e-39, P = 2.6e-39
Identities = 125/435 (28%), Positives = 207/435 (47%)
Query: 314 KKMGSSASLGKYDMKITKRVPLKSLEDEHDFEEQVELIR----KEISXXXXXXXXXXXXX 369
KK+ S +L Y K+ +++ ++L+ + ++Q E + S
Sbjct: 53 KKVKSLKNLD-YTKKLAEKIKQQALQKQQKQQKQQEQENANHNQTESSLSSSSSTTSSSI 111
Query: 370 XXXXPI--LSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGT 427
P L K F E + P ++++ + + + T +Q + LEGKD + A+TG+
Sbjct: 112 TTIDPDAELKFKTFKELNLVPDLLESIESMKFTKPTPIQSEAIPHALEGKDIIGLAQTGS 171
Query: 428 GKSIAFLLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGV 487
GK+ AF +P ++++ A P + L+L PTREL QI + L + G+
Sbjct: 172 GKTAAFAIPILQSLWHAQQ--------PYFALVLAPTRELTFQIK-DTFDALGSSMGLRS 222
Query: 488 LTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLL 547
+VGG R L P ++VATPGR++DH+E+ G S++ LK LV+DEAD LL
Sbjct: 223 SCIVGGMDMMDQARDLMRKP-HVIVATPGRIMDHLEHTKGFSLK--NLKYLVMDEADRLL 279
Query: 548 DLGFRKDVENIVDCLPRRRQSLLFSATMPKELV-LKRE--HTYIDTVGLGSVETPVKIKQ 604
D+ F ++ I+ +P +R + LFSATM ++ L+R H + +T + Q
Sbjct: 280 DMDFGPALDKILKVIPIKRTTYLFSATMTNKIEKLQRASLHNPVRVAVSSKYQTADNLVQ 339
Query: 605 SCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSR 664
S ++ IL HLL E +G +IVF T LL R + N ++ +
Sbjct: 340 SMMLVNDGYKNTILIHLLNE-FMGK---SIIVFTRTVAHAQRTALLARILGFNAVPLHGQ 395
Query: 665 KPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXX 724
Q R +F++++ ILV +DV+ARG+D P V V+ IP D + YIH
Sbjct: 396 LSQSQRLGSLNKFKSNQANILVATDVAARGLDIPSVDVVINYDIPTDSKAYIHRVGRTAR 455
Query: 725 XXXXXXXVLLLAPWE 739
+ L+ ++
Sbjct: 456 AGRSGKSISLITQYD 470
>UNIPROTKB|P21693 [details] [associations]
symbol:dbpA species:83333 "Escherichia coli K-12"
[GO:0003724 "RNA helicase activity" evidence=IDA] [GO:0016887
"ATPase activity" evidence=IDA] [GO:0033677 "DNA/RNA helicase
activity" evidence=IDA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0000027 "ribosomal large subunit assembly" evidence=IMP]
[GO:0034459 "ATP-dependent 3'-5' RNA helicase activity"
evidence=IDA] [GO:0019843 "rRNA binding" evidence=IDA] [GO:0043531
"ADP binding" evidence=IDA] [GO:0005524 "ATP binding"
evidence=IEA;IDA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005737 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0043531
GO:GO:0019843 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0000027 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
EMBL:X52647 PIR:B64884 RefSeq:NP_415859.1 RefSeq:YP_489613.1
ProteinModelPortal:P21693 SMR:P21693 IntAct:P21693 PRIDE:P21693
EnsemblBacteria:EBESCT00000004879 EnsemblBacteria:EBESCT00000014318
GeneID:12933991 GeneID:947153 KEGG:ecj:Y75_p1320 KEGG:eco:b1343
PATRIC:32117966 EchoBASE:EB0206 EcoGene:EG10210
HOGENOM:HOG000268809 KO:K05591 OMA:HIDPARF ProtClustDB:PRK11776
BioCyc:EcoCyc:EG10210-MONOMER BioCyc:ECOL316407:JW1337-MONOMER
BioCyc:MetaCyc:EG10210-MONOMER Genevestigator:P21693 GO:GO:0034459
GO:GO:0033677 InterPro:IPR005580 Pfam:PF03880 Uniprot:P21693
Length = 457
Score = 425 (154.7 bits), Expect = 3.3e-39, P = 3.3e-39
Identities = 119/356 (33%), Positives = 173/356 (48%)
Query: 386 ISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKAT 445
+ P + L GY+ MT VQ A L A L GKD V+AKTG+GK+ AF L ++ +
Sbjct: 10 LPPAQLTNLNELGYLTMTPVQAAALPAILAGKDVRVQAKTGSGKTAAFGLGLLQQI--DA 67
Query: 446 SSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLES 505
S TQ L+LCPTRELA Q+A E L + +LTL GG F + + L+
Sbjct: 68 SLFQTQ------ALVLCPTRELADQVAGELRRLARFLPNTKILTLCGGQPFGMQRDSLQH 121
Query: 506 DPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRR 565
P I+VATPGRLLDH++ G +V L L LV+DEAD +LD+GF +++++ P
Sbjct: 122 AP-HIIVATPGRLLDHLQK--G-TVSLDALNTLVMDEADRMLDMGFSDAIDDVIRFAPAS 177
Query: 566 RQSLLFSATMPKELVLKREHTYID--TVGLGSVETPVKIKQSCLVAPHELHFQILHHLLK 623
RQ+LLFSAT P+ + D + + S + I+Q + +L LL
Sbjct: 178 RQTLLFSATWPEAIAAISGRVQRDPLAIEIDSTDALPPIEQQFYETSSKGKIPLLQRLLS 237
Query: 624 EHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEFRASKRL 683
H P +VFC+T + L E+ + ++ Q RD+ F
Sbjct: 238 LH---QPS-SCVVFCNTKKDCQAVCDALNEVGQSALSLHGDLEQRDRDQTLVRFANGSAR 293
Query: 684 ILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXXXXXXXVLLLAPWE 739
+LV +DV+ARG+D + VV + D E ++H + AP E
Sbjct: 294 VLVATDVAARGLDIKSLELVVNFELAWDPEVHVHRIGRTARAGNSGLAISFCAPEE 349
>TIGR_CMR|SO_1383 [details] [associations]
symbol:SO_1383 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:AE014299
GenomeReviews:AE014299_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
HSSP:Q58083 HOGENOM:HOG000268807 RefSeq:NP_717003.1
ProteinModelPortal:Q8EH47 GeneID:1169204 KEGG:son:SO_1383
PATRIC:23522420 OMA:SEVVHGE ProtClustDB:CLSK906234 Uniprot:Q8EH47
Length = 433
Score = 425 (154.7 bits), Expect = 3.3e-39, P = 3.3e-39
Identities = 113/340 (33%), Positives = 181/340 (53%)
Query: 380 RFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIE 439
RF+ P ++A++ GY +MT +Q+ + A G+D + A+TGTGK+ AF LP ++
Sbjct: 2 RFESFSFCPEILRAISDCGYQKMTPIQQQAIPAIRRGQDVLASAQTGTGKTAAFALPILQ 61
Query: 440 AVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVD 499
+++ S + L VLIL PTRELA+Q+A E + + VLT+ GG + +
Sbjct: 62 KMVENPSET---LKSNTRVLILTPTRELAAQVA-ENVEAYSKYLNFSVLTIYGGVKVETQ 117
Query: 500 QRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIV 559
++L+ I+VATPGRLL+H+ + ++ L + LVLDEAD +LD+GF D++ I+
Sbjct: 118 AQKLKRG-ADIIVATPGRLLEHL---TACNLSLSSVDFLVLDEADRMLDMGFSADIQKIL 173
Query: 560 DCLPRRRQSLLFSATMPKELV-LKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQIL 618
+ ++RQ+LLFSAT + L E V + S +V P E +
Sbjct: 174 QAVNKKRQNLLFSATFSSAVKKLANEMMIKPQVISADKQNTTADTVSQVVYPVEQRRK-- 231
Query: 619 HHLLKEHILGTPDYK-VIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEF 677
LL E ++G +++ V+VF +T L L + ++ K Q R R EF
Sbjct: 232 RELLSE-LIGKKNWQQVLVFTATRDAADTLVKELNLDGIPSEVVHGEKAQGSRRRALREF 290
Query: 678 RASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 717
+ K +LV ++V+ARG+D P + VV +P E Y+H
Sbjct: 291 VSGKVRVLVATEVAARGLDIPSLEYVVNFDLPFLAEDYVH 330
>TIGR_CMR|GSU_0491 [details] [associations]
symbol:GSU_0491 "ATP-dependent RNA helicase RhlE"
species:243231 "Geobacter sulfurreducens PCA" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE017180 GenomeReviews:AE017180_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807
RefSeq:NP_951550.1 ProteinModelPortal:Q74FW1 GeneID:2686040
KEGG:gsu:GSU0491 PATRIC:22023733 OMA:TTHEHIE ProtClustDB:CLSK827872
BioCyc:GSUL243231:GH27-490-MONOMER Uniprot:Q74FW1
Length = 450
Score = 424 (154.3 bits), Expect = 4.3e-39, P = 4.3e-39
Identities = 120/344 (34%), Positives = 182/344 (52%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F E ++P +KA+ A GY + T VQ A + LE D + A+TGTGK+ AF+LPA++
Sbjct: 3 FAELKLAPHILKAVAACGYTEPTPVQAAAVPRALENVDLLATAQTGTGKTAAFVLPALQR 62
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
L + + P VL+L PTRELA Q+ +A+ + ++GG + Q
Sbjct: 63 -LSSPPQGPGR--GP-RVLVLTPTRELAQQVT-DAVRTYGAFMRVRSGAILGGMPYHA-Q 116
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
RL S P +VATPGRL+D ++ +S + L L++LVLDEAD +LD+GF DV+ I
Sbjct: 117 LRLLSAPVDFIVATPGRLVDLLDRRS---LDLSRLELLVLDEADRMLDMGFSDDVDRIAA 173
Query: 561 CLPRRRQSLLFSATMPKELV-----LKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHF 615
P RQ+LLF+ATM + L RE ID G + T I+Q VA +LH
Sbjct: 174 ASPATRQTLLFTATMDSAMARLAGRLLREPERIDIAGTKT--THEHIEQRLHVAD-DLHH 230
Query: 616 Q--ILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRI 673
+ +L HL+ + L + I+F +T L L L+ + ++ PQ R+R
Sbjct: 231 KNRLLRHLITDESLR----RAIIFSATKRDAENLALELKAQGHSAAALHGDMPQNARNRT 286
Query: 674 SEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 717
+ + +LV +DV+ARG+D ++ V+ +P E Y+H
Sbjct: 287 IAAMKQGRIRLLVATDVAARGLDVTGISHVINFDLPKFAEDYVH 330
>TIGR_CMR|SPO_1443 [details] [associations]
symbol:SPO_1443 "ATP-dependent RNA helicase RhlE"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927 RefSeq:YP_166684.1
ProteinModelPortal:Q5LTH1 GeneID:3193638 KEGG:sil:SPO1443
PATRIC:23376201 OMA:VPTHAED ProtClustDB:CLSK933557 Uniprot:Q5LTH1
Length = 471
Score = 423 (154.0 bits), Expect = 5.5e-39, P = 5.5e-39
Identities = 117/370 (31%), Positives = 184/370 (49%)
Query: 380 RFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIE 439
+F E ++P +KA+ AGY T +Q + LEG+D + A+TGTGK+ +F LP I
Sbjct: 3 KFSELNLNPKVLKAIEEAGYETPTPIQAGAIPPALEGRDVLGIAQTGTGKTASFTLPMIT 62
Query: 440 AVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVD 499
+ + + + +P L+LCPTRELA+Q+A E H + L+GG FK +
Sbjct: 63 LLARGRARAR---MPRS--LVLCPTRELAAQVA-ENFDTYTKHLKLTKALLIGGVSFK-E 115
Query: 500 QRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIV 559
Q L +L+ATPGRLLDH E L L G++++V+DEAD +LD+GF D+E I
Sbjct: 116 QDALIDRGVDVLIATPGRLLDHFERGKLL---LTGVQIMVVDEADRMLDMGFIPDIERIF 172
Query: 560 DCLPRRRQSLLFSATMPKELVLKREHTYIDT---VGLGSVETPVK-IKQSCLV---APHE 612
P RQ+L FSATM E+ + +T++ + + T + I+Q ++ + +
Sbjct: 173 SLTPFTRQTLFFSATMAPEIE-RITNTFLSAPARIEVARQATASETIEQGVVLFKGSRRD 231
Query: 613 LHFQILHHLLKEHI--LGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYR 670
+L+ I G I+FC+ ++ L++ + ++ Q R
Sbjct: 232 REASEKRAVLRALIDAEGEKCTNAIIFCNRKTDVDIVAKSLQKYGYDAAPIHGDLDQSQR 291
Query: 671 DRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXXXXXX 730
R + FR K +LV SDV+ARG+D P V+ V +P E Y+H
Sbjct: 292 TRTLDGFREGKLRLLVASDVAARGLDVPSVSHVFNFDVPGHPEDYVHRIGRTGRAGRDGK 351
Query: 731 XVLLLAPWEE 740
+ L P +E
Sbjct: 352 AITLCIPRDE 361
>UNIPROTKB|Q3AFI3 [details] [associations]
symbol:CHY_0229 "ATP-dependent RNA helicase, DEAD box
family" species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268810 KO:K05592 RefSeq:YP_359101.1
ProteinModelPortal:Q3AFI3 STRING:Q3AFI3 GeneID:3727044
KEGG:chy:CHY_0229 PATRIC:21273641 OMA:YAAKGLH
BioCyc:CHYD246194:GJCN-230-MONOMER Uniprot:Q3AFI3
Length = 430
Score = 422 (153.6 bits), Expect = 7.1e-39, P = 7.1e-39
Identities = 117/343 (34%), Positives = 184/343 (53%)
Query: 379 KRFDECG-ISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPA 437
+ F + G I+PL +KA+ G+ T +Q+ + LEG + V +A TGTGK+ A+LLP
Sbjct: 2 EEFKKLGLITPL-LKAVNDLGFEMPTPIQKEAIPLILEGHNLVGQAPTGTGKTAAYLLPV 60
Query: 438 IEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFK 497
++ + + + VLI+ PTRELA Q+A E +A L + + L + GG +
Sbjct: 61 LQRIQRGKKAQ---------VLIVTPTRELALQVADE-VAKLGKYLKVRALAVYGGQAIE 110
Query: 498 VDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVEN 557
R L +++V TPGR+LDHI K+ + + K+++LDEAD +LD+GF D+E
Sbjct: 111 RQIRGLRQG-VEVIVGTPGRILDHIGRKTFPAAEI---KIVILDEADEMLDMGFIDDIEA 166
Query: 558 IVDCLPRRRQSLLFSATMPKEL--VLKREHTYIDTVGL-GSVETPVKIKQSCLVAPHELH 614
I++ L R+Q+LLFSAT+P + ++K+ TV L G +T I+Q P
Sbjct: 167 ILNTLTNRQQTLLFSATLPAPIKTIIKKFLGGYKTVKLVGREKTVPAIRQVYYELPETEK 226
Query: 615 FQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRIS 674
+ L +L + P + IVFC T + L + ++ Q R +
Sbjct: 227 IEGLVSILNSEL---P-IQAIVFCRTKKRVDEVVEQLNFRGYAAKGLHGDMSQRERTQTI 282
Query: 675 EEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 717
+ F+A K +LV +DV+ARG+D PDV+ V+ IP + E YIH
Sbjct: 283 KSFKAGKTELLVATDVAARGLDIPDVSHVINFDIPQNPESYIH 325
>TIGR_CMR|CHY_0229 [details] [associations]
symbol:CHY_0229 "ATP-dependent RNA helicase, DEAD box
family" species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268810 KO:K05592 RefSeq:YP_359101.1
ProteinModelPortal:Q3AFI3 STRING:Q3AFI3 GeneID:3727044
KEGG:chy:CHY_0229 PATRIC:21273641 OMA:YAAKGLH
BioCyc:CHYD246194:GJCN-230-MONOMER Uniprot:Q3AFI3
Length = 430
Score = 422 (153.6 bits), Expect = 7.1e-39, P = 7.1e-39
Identities = 117/343 (34%), Positives = 184/343 (53%)
Query: 379 KRFDECG-ISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPA 437
+ F + G I+PL +KA+ G+ T +Q+ + LEG + V +A TGTGK+ A+LLP
Sbjct: 2 EEFKKLGLITPL-LKAVNDLGFEMPTPIQKEAIPLILEGHNLVGQAPTGTGKTAAYLLPV 60
Query: 438 IEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFK 497
++ + + + VLI+ PTRELA Q+A E +A L + + L + GG +
Sbjct: 61 LQRIQRGKKAQ---------VLIVTPTRELALQVADE-VAKLGKYLKVRALAVYGGQAIE 110
Query: 498 VDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVEN 557
R L +++V TPGR+LDHI K+ + + K+++LDEAD +LD+GF D+E
Sbjct: 111 RQIRGLRQG-VEVIVGTPGRILDHIGRKTFPAAEI---KIVILDEADEMLDMGFIDDIEA 166
Query: 558 IVDCLPRRRQSLLFSATMPKEL--VLKREHTYIDTVGL-GSVETPVKIKQSCLVAPHELH 614
I++ L R+Q+LLFSAT+P + ++K+ TV L G +T I+Q P
Sbjct: 167 ILNTLTNRQQTLLFSATLPAPIKTIIKKFLGGYKTVKLVGREKTVPAIRQVYYELPETEK 226
Query: 615 FQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRIS 674
+ L +L + P + IVFC T + L + ++ Q R +
Sbjct: 227 IEGLVSILNSEL---P-IQAIVFCRTKKRVDEVVEQLNFRGYAAKGLHGDMSQRERTQTI 282
Query: 675 EEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 717
+ F+A K +LV +DV+ARG+D PDV+ V+ IP + E YIH
Sbjct: 283 KSFKAGKTELLVATDVAARGLDIPDVSHVINFDIPQNPESYIH 325
>FB|FBgn0030855 [details] [associations]
symbol:CG5800 species:7227 "Drosophila melanogaster"
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0007526 "larval somatic muscle development"
evidence=IMP] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0022008 EMBL:AE014298
GO:GO:0006200 GO:GO:0003723 GO:GO:0007526 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0016779
KO:K14776 InterPro:IPR025313 Pfam:PF13959
GeneTree:ENSGT00550000074980 OMA:ADKVIEP HSSP:P10081 EMBL:AY119628
RefSeq:NP_573230.1 UniGene:Dm.13464 SMR:Q9VX34 STRING:Q9VX34
EnsemblMetazoa:FBtr0074453 GeneID:32742 KEGG:dme:Dmel_CG5800
UCSC:CG5800-RA FlyBase:FBgn0030855 InParanoid:Q9VX34
OrthoDB:EOG4MCVFH GenomeRNAi:32742 NextBio:780142 Uniprot:Q9VX34
Length = 826
Score = 443 (161.0 bits), Expect = 7.9e-39, P = 7.9e-39
Identities = 142/469 (30%), Positives = 231/469 (49%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
K+F + +S T KAL + ++ T+VQ ++ L+GKD + A TG+GK++AFL+P +
Sbjct: 72 KKFAQFPLSKKTQKALAESKFVHPTQVQRDSIGPALQGKDVLGAAITGSGKTLAFLIPVL 131
Query: 439 EAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
E + S T + +I+ PTRELA QI + K+HD L ++GG K
Sbjct: 132 EHLFMNKWSRTDG----VGAIIISPTRELAYQIFETLKKVGKHHDFSAGL-IIGGKNLKF 186
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
++ R+ D C IL+ TPGRLL H++ + M +MLVLDEAD LD+GF+K + +I
Sbjct: 187 ERTRM--DQCNILICTPGRLLQHMDENPLFNTSTM--EMLVLDEADRCLDMGFQKTLNSI 242
Query: 559 VDCLPRRRQSLLFSATMPKELV-LKR----EHTYIDTVGLGSVETPV----KIKQSCLVA 609
++ P RQ+LLFSAT + L R + Y+ G E P K + ++A
Sbjct: 243 IENFPPVRQTLLFSATQTNTVQDLARLNLKDPVYVGYGGATPREEPSASTKKTPNTAVLA 302
Query: 610 PHEL---HFQILH-----HLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMN--VR 659
EL + +L+ +L I K+IVF ++ LY + +++ +
Sbjct: 303 VPELLQQSYVVLNLEDKITMLWSFIKNHLKQKIIVFVASCKQAKYLYEIFCKLRPGSPLL 362
Query: 660 EMYSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXX 719
+Y Q R I E+F +++ ++DV++RG+D+P V VVQ+ P D QYIH
Sbjct: 363 ALYGTLHQDRRIAIYEDFLRKSHVVMFSTDVASRGLDFPAVNWVVQLDCPEDVSQYIHRA 422
Query: 720 XXXXXXXXXXXXVLLLAPWEE-YFXXXXXXXXXXXXXXXXXNPEI----QLQMDNHMAKI 774
+L+L P EE Y +P+ +++++ +A+
Sbjct: 423 GRSARNKTRGECLLVLTPSEEEYMISALKEQLNIDIRCVQIDPKKLFSPRVKIEAFLAQF 482
Query: 775 DNNVKEAAYHAWLGYYNSIREIGRDKT--TLVEL-ANKFAQSIGLQRPP 820
++ A A+L Y S+ + R+K + L + FAQS+GL P
Sbjct: 483 PE-LRATAQRAFLSYIKSVF-LMRNKRLFNVFSLDLDAFAQSLGLAVTP 529
Score = 161 (61.7 bits), Expect = 6.1e-08, P = 6.1e-08
Identities = 61/239 (25%), Positives = 107/239 (44%)
Query: 599 PVKIKQSCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMN- 657
P ++QS +V E +L +K H+ K+IVF ++ LY + +++
Sbjct: 304 PELLQQSYVVLNLEDKITMLWSFIKNHL----KQKIIVFVASCKQAKYLYEIFCKLRPGS 359
Query: 658 -VREMYSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYI 716
+ +Y Q R I E+F +++ ++DV++RG+D+P V VVQ+ P D QYI
Sbjct: 360 PLLALYGTLHQDRRIAIYEDFLRKSHVVMFSTDVASRGLDFPAVNWVVQLDCPEDVSQYI 419
Query: 717 HXXXXXXXXXXXXXXVLLLAPWEE-YFXXXXXXXXXXXXXXXXXNPEI----QLQMDNHM 771
H +L+L P EE Y +P+ +++++ +
Sbjct: 420 HRAGRSARNKTRGECLLVLTPSEEEYMISALKEQLNIDIRCVQIDPKKLFSPRVKIEAFL 479
Query: 772 AKIDNNVKEAAYHAWLGYYNSIREIGRDKT--TLVEL-ANKFAQSIGLQRPP--PLFRK 825
A+ ++ A A+L Y S+ + R+K + L + FAQS+GL P P K
Sbjct: 480 AQFPE-LRATAQRAFLSYIKSVF-LMRNKRLFNVFSLDLDAFAQSLGLAVTPRVPFLEK 536
>UNIPROTKB|P25888 [details] [associations]
symbol:rhlE "ATP-dependent RNA helicase" species:83333
"Escherichia coli K-12" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0042255 "ribosome assembly" evidence=IGI]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IDA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0003723
GO:GO:0005840 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0042255 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 EMBL:L02123 HOGENOM:HOG000268807 EMBL:X56307
PIR:E64816 RefSeq:NP_415318.1 RefSeq:YP_489070.1
ProteinModelPortal:P25888 SMR:P25888 DIP:DIP-10697N IntAct:P25888
MINT:MINT-1313387 PRIDE:P25888 EnsemblBacteria:EBESCT00000003075
EnsemblBacteria:EBESCT00000017437 GeneID:12930968 GeneID:945425
KEGG:ecj:Y75_p0770 KEGG:eco:b0797 PATRIC:32116795 EchoBASE:EB1217
EcoGene:EG11235 KO:K11927 OMA:HLIKQHN ProtClustDB:PRK10590
BioCyc:EcoCyc:EG11235-MONOMER BioCyc:ECOL316407:JW0781-MONOMER
Genevestigator:P25888 Uniprot:P25888
Length = 454
Score = 421 (153.3 bits), Expect = 9.2e-39, P = 9.2e-39
Identities = 112/340 (32%), Positives = 183/340 (53%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
FD G+SP ++A+ GY + T +Q+ + A LEG+D + A+TGTGK+ F LP ++
Sbjct: 3 FDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQH 62
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
++ T + P+ LIL PTRELA+QI E + + I L + GG
Sbjct: 63 LI--TRQPHAKGRRPVRALILTPTRELAAQIG-ENVRDYSKYLNIRSLVVFGGVSINPQM 119
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
+L +LVATPGRLLD +E+++ +V+L +++LVLDEAD +LD+GF D+ ++
Sbjct: 120 MKLRGG-VDVLVATPGRLLD-LEHQN--AVKLDQVEILVLDEADRMLDMGFIHDIRRVLT 175
Query: 561 CLPRRRQSLLFSATMPKELVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHF--QIL 618
LP +RQ+LLFSAT ++ E + + +E + S V H +HF +
Sbjct: 176 KLPAKRQNLLFSATFSDDIKALAEKLLHNPL---EIEVARRNTASDQVTQH-VHFVDKKR 231
Query: 619 HHLLKEHILGTPDYK-VIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEF 677
L H++G +++ V+VF T + L L + + ++ K Q R R +F
Sbjct: 232 KRELLSHMIGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADF 291
Query: 678 RASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 717
++ +LV +D++ARG+D ++ VV +P E Y+H
Sbjct: 292 KSGDIRVLVATDIAARGLDIEELPHVVNYELPNVPEDYVH 331
>UNIPROTKB|A0R8U6 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:412694 "Bacillus thuringiensis str. Al Hakam" [GO:0003723
"RNA binding" evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
[GO:0043590 "bacterial nucleoid" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043590 EMBL:CP000485 RefSeq:YP_893146.1
ProteinModelPortal:A0R8U6 STRING:A0R8U6
EnsemblBacteria:EBBACT00000069056 GeneID:4546566
GenomeReviews:CP000485_GR KEGG:btl:BALH_0232 PATRIC:18992499
HOGENOM:HOG000268810 KO:K05592 OMA:IIDHINR ProtClustDB:CLSK915749
BioCyc:BTHU412694:GH1W-393-MONOMER Uniprot:A0R8U6
Length = 528
Score = 419 (152.6 bits), Expect = 1.5e-38, P = 1.5e-38
Identities = 129/435 (29%), Positives = 202/435 (46%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F E G+S ++++ + G+ + T +Q T+ L+GKD + +A+TGTGK+ AF LP ++
Sbjct: 4 FRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLDK 63
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
V T + Q + ++ PTRELA Q+ E + K H + +L + GG
Sbjct: 64 V--DTHKESVQGI------VIAPTRELAIQVGEELYKIGK-HKRVRILPIYGGQDINRQI 114
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
R L+ P I+V TPGR+LDHI K+ +RL ++ +VLDEAD +L++GF +D+E I+
Sbjct: 115 RALKKHP-HIIVGTPGRILDHINRKT---LRLQNVETVVLDEADEMLNMGFIEDIEAILT 170
Query: 561 CLPRRRQSLLFSATMPKEL--VLKREHTYIDTVGLGSVE-TPVKIKQSCLVAPHELHFQI 617
+P Q+LLFSATMP + + +R T + + + E T I+Q L + F +
Sbjct: 171 DVPETHQTLLFSATMPDPIRRIAERFMTEPQHIKVKAKEVTMPNIQQFYLEVQEKKKFDV 230
Query: 618 LHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEF 677
L LL + +P+ IVF T L L ++ Q R + +F
Sbjct: 231 LTRLLD---IQSPEL-AIVFGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKRMSVLRKF 286
Query: 678 RASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXXXXXXXVLLLAP 737
+ +LV +DV+ARG+D VT V IP D E Y+H +L + P
Sbjct: 287 KEGSIEVLVATDVAARGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAGKKGIAMLFVTP 346
Query: 738 WEEYFXXXXXXXXXXXXXXXXXNPEIQLQMDNHMAKIDNNVKEAAYHAWLGYYNSIREI- 796
E P + ++ I ++ + L YY I E
Sbjct: 347 -RESGQLKNIERTTKRKMDRMDAPTLDEALEGQQRLIAEKLQSTIENENLAYYKRIAEEM 405
Query: 797 --GRDKTTLVELANK 809
D T+V A K
Sbjct: 406 LEENDSVTVVAAALK 420
>UNIPROTKB|Q47Z59 [details] [associations]
symbol:CPS_3215 "Putative ATP-dependent RNA helicase SrmB"
species:167879 "Colwellia psychrerythraea 34H" [GO:0042254
"ribosome biogenesis" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0042254 EMBL:CP000083 GenomeReviews:CP000083_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 RefSeq:YP_269911.1 ProteinModelPortal:Q47Z59
STRING:Q47Z59 GeneID:3520324 KEGG:cps:CPS_3215 PATRIC:21469413
OMA:PKFIVAT ProtClustDB:CLSK869483
BioCyc:CPSY167879:GI48-3264-MONOMER Uniprot:Q47Z59
Length = 448
Score = 419 (152.6 bits), Expect = 1.5e-38, P = 1.5e-38
Identities = 116/371 (31%), Positives = 190/371 (51%)
Query: 380 RFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIE 439
+F + G+ + + G+ + T++Q+ + A + G D + +KTG+GK++AF++PA++
Sbjct: 2 QFSDFGLDSALMSTIEHMGFNEPTQIQQQAIPAAMAGHDLIASSKTGSGKTLAFIIPALQ 61
Query: 440 AVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVD 499
+ K + S P V+IL PTRELA Q+ ++ N VL L GG F
Sbjct: 62 RLSKNRALSKRD---P-RVVILTPTRELAKQVFSQLRLFTANTQYKAVLIL-GGENFNDQ 116
Query: 500 QRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIV 559
+ L+ +P + +VATPGRL DH+ G L GL++L+LDEAD +LDLGF K++ I
Sbjct: 117 VKVLQKEP-EFIVATPGRLADHLTQ--G-HFHLNGLELLILDEADRMLDLGFSKELTQIN 172
Query: 560 DCLP-RRRQSLLFSATMPKELVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELH---- 614
R+RQ+LLFSAT+ +H ++ + E K K+ + A H H
Sbjct: 173 KAADHRKRQTLLFSATL--------DHAQVNEF---ATELLTKPKRIAINAGHSEHVDIA 221
Query: 615 --FQILHHL-----LKEHILGTP-DYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKP 666
F + +L L +H L T ++I+F +T T L LL E +N +
Sbjct: 222 KRFYLADNLTQKEALLQHFLVTEKSQQIIIFTATRSDTDRLAKLLTEQNLNAVALSGELN 281
Query: 667 QLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXX 726
Q R++I E F + ILVT+D+++RG+D +V+ V+ +P E+++H
Sbjct: 282 QGQRNQIMESFSKGQHKILVTTDLASRGLDLINVSHVINFDMPKHTEEFVHRIGRTGRAG 341
Query: 727 XXXXXVLLLAP 737
+ L+ P
Sbjct: 342 TKGDAISLVGP 352
>UNIPROTKB|Q63GX5 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:288681 "Bacillus cereus E33L" [GO:0003723 "RNA binding"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS] [GO:0043590
"bacterial nucleoid" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043590 KO:K05592 OMA:IIDHINR
ProtClustDB:CLSK915749 HSSP:Q58083 EMBL:CP000001 RefSeq:YP_081836.1
ProteinModelPortal:Q63GX5 STRING:Q63GX5
EnsemblBacteria:EBBACT00000041470 GeneID:3022962
GenomeReviews:CP000001_GR KEGG:bcz:BCZK0221 PATRIC:18883656
BioCyc:BCER288681:GHG7-745-MONOMER Uniprot:Q63GX5
Length = 528
Score = 419 (152.6 bits), Expect = 1.5e-38, P = 1.5e-38
Identities = 129/435 (29%), Positives = 202/435 (46%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F E G+S ++++ + G+ + T +Q T+ L+GKD + +A+TGTGK+ AF LP ++
Sbjct: 4 FRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLDK 63
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
V T + Q + ++ PTRELA Q+ E + K H + +L + GG
Sbjct: 64 V--DTHKESVQGI------VIAPTRELAIQVGEELYKIGK-HKRVRILPIYGGQDINRQI 114
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
R L+ P I+V TPGR+LDHI K+ +RL ++ +VLDEAD +L++GF +D+E I+
Sbjct: 115 RALKKHP-HIIVGTPGRILDHINRKT---LRLQNVETVVLDEADEMLNMGFIEDIEAILT 170
Query: 561 CLPRRRQSLLFSATMPKEL--VLKREHTYIDTVGLGSVE-TPVKIKQSCLVAPHELHFQI 617
+P Q+LLFSATMP + + +R T + + + E T I+Q L + F +
Sbjct: 171 DVPETHQTLLFSATMPDPIRRIAERFMTEPQHIKVKAKEVTMPNIQQFYLEVQEKKKFDV 230
Query: 618 LHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEF 677
L LL + +P+ IVF T L L ++ Q R + +F
Sbjct: 231 LTRLLD---IQSPEL-AIVFGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKRMSVLRKF 286
Query: 678 RASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXXXXXXXVLLLAP 737
+ +LV +DV+ARG+D VT V IP D E Y+H +L + P
Sbjct: 287 KEGSIEVLVATDVAARGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAGKKGIAMLFVTP 346
Query: 738 WEEYFXXXXXXXXXXXXXXXXXNPEIQLQMDNHMAKIDNNVKEAAYHAWLGYYNSIREI- 796
E P + ++ I ++ + L YY I E
Sbjct: 347 -RESGQLKNIERTTKRKMDRMDAPTLDEALEGQQRLIAEKLQSTIENENLAYYKRIAEEM 405
Query: 797 --GRDKTTLVELANK 809
D T+V A K
Sbjct: 406 LEENDSVTVVAAALK 420
>UNIPROTKB|Q6HPE6 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:281309 "Bacillus thuringiensis serovar konkukian str.
97-27" [GO:0003723 "RNA binding" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005524
"ATP binding" evidence=ISS] [GO:0043590 "bacterial nucleoid"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GO:GO:0043590 HOGENOM:HOG000268810 KO:K05592 OMA:IIDHINR
ProtClustDB:CLSK915749 HSSP:Q58083 EMBL:AE017355 RefSeq:YP_034574.1
ProteinModelPortal:Q6HPE6 EnsemblBacteria:EBBACT00000074889
GeneID:2854643 GenomeReviews:AE017355_GR KEGG:btk:BT9727_0219
PATRIC:18980863 BioCyc:BTHU281309:GJID-254-MONOMER Uniprot:Q6HPE6
Length = 528
Score = 419 (152.6 bits), Expect = 1.5e-38, P = 1.5e-38
Identities = 129/435 (29%), Positives = 202/435 (46%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F E G+S ++++ + G+ + T +Q T+ L+GKD + +A+TGTGK+ AF LP ++
Sbjct: 4 FRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLDK 63
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
V T + Q + ++ PTRELA Q+ E + K H + +L + GG
Sbjct: 64 V--DTHKESVQGI------VIAPTRELAIQVGEELYKIGK-HKRVRILPIYGGQDINRQI 114
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
R L+ P I+V TPGR+LDHI K+ +RL ++ +VLDEAD +L++GF +D+E I+
Sbjct: 115 RALKKHP-HIIVGTPGRILDHINRKT---LRLQNVETVVLDEADEMLNMGFIEDIEAILT 170
Query: 561 CLPRRRQSLLFSATMPKEL--VLKREHTYIDTVGLGSVE-TPVKIKQSCLVAPHELHFQI 617
+P Q+LLFSATMP + + +R T + + + E T I+Q L + F +
Sbjct: 171 DVPETHQTLLFSATMPDPIRRIAERFMTEPQHIKVKAKEVTMPNIQQFYLEVQEKKKFDV 230
Query: 618 LHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEF 677
L LL + +P+ IVF T L L ++ Q R + +F
Sbjct: 231 LTRLLD---IQSPEL-AIVFGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKRMSVLRKF 286
Query: 678 RASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXXXXXXXVLLLAP 737
+ +LV +DV+ARG+D VT V IP D E Y+H +L + P
Sbjct: 287 KEGSIEVLVATDVAARGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAGKKGIAMLFVTP 346
Query: 738 WEEYFXXXXXXXXXXXXXXXXXNPEIQLQMDNHMAKIDNNVKEAAYHAWLGYYNSIREI- 796
E P + ++ I ++ + L YY I E
Sbjct: 347 -RESGQLKNIERTTKRKMDRMDAPTLDEALEGQQRLIAEKLQSTIENENLAYYKRIAEEM 405
Query: 797 --GRDKTTLVELANK 809
D T+V A K
Sbjct: 406 LEENDSVTVVAAALK 420
>UNIPROTKB|Q73EU1 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:222523 "Bacillus cereus ATCC 10987" [GO:0003723 "RNA
binding" evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
[GO:0043590 "bacterial nucleoid" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043590 HOGENOM:HOG000268810 KO:K05592
OMA:IIDHINR ProtClustDB:CLSK915749 HSSP:Q58083 EMBL:AE017194
RefSeq:NP_976595.1 ProteinModelPortal:Q73EU1 STRING:Q73EU1
DNASU:2752637 EnsemblBacteria:EBBACT00000029857 GeneID:2752637
GenomeReviews:AE017194_GR KEGG:bca:BCE_0267 PATRIC:18849372
Uniprot:Q73EU1
Length = 525
Score = 419 (152.6 bits), Expect = 1.5e-38, P = 1.5e-38
Identities = 129/435 (29%), Positives = 202/435 (46%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F E G+S ++++ + G+ + T +Q T+ L+GKD + +A+TGTGK+ AF LP ++
Sbjct: 4 FRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLDK 63
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
V T + Q + ++ PTRELA Q+ E + K H + +L + GG
Sbjct: 64 V--DTHKESVQGI------VIAPTRELAIQVGEELYKIGK-HKRVRILPIYGGQDINRQI 114
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
R L+ P I+V TPGR+LDHI K+ +RL ++ +VLDEAD +L++GF +D+E I+
Sbjct: 115 RALKKHP-HIIVGTPGRILDHINRKT---LRLQNVETVVLDEADEMLNMGFIEDIEAILT 170
Query: 561 CLPRRRQSLLFSATMPKEL--VLKREHTYIDTVGLGSVE-TPVKIKQSCLVAPHELHFQI 617
+P Q+LLFSATMP + + +R T + + + E T I+Q L + F +
Sbjct: 171 DVPETHQTLLFSATMPDPIRRIAERFMTEPQHIKVKAKEVTMPNIQQFYLEVQEKKKFDV 230
Query: 618 LHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEF 677
L LL + +P+ IVF T L L ++ Q R + +F
Sbjct: 231 LTRLLD---IQSPEL-AIVFGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKRMSVLRKF 286
Query: 678 RASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXXXXXXXVLLLAP 737
+ +LV +DV+ARG+D VT V IP D E Y+H +L + P
Sbjct: 287 KEGSIEVLVATDVAARGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAGKKGIAMLFVTP 346
Query: 738 WEEYFXXXXXXXXXXXXXXXXXNPEIQLQMDNHMAKIDNNVKEAAYHAWLGYYNSIREI- 796
E P + ++ I ++ + L YY I E
Sbjct: 347 -RESGQLKNIERTTKRKMDRMDAPTLDEALEGQQRLIAEKLQNTIENENLAYYKRIAEEM 405
Query: 797 --GRDKTTLVELANK 809
D T+V A K
Sbjct: 406 LEENDSVTVVAAALK 420
>UNIPROTKB|Q81IT9 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:226900 "Bacillus cereus ATCC 14579" [GO:0003723 "RNA
binding" evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
[GO:0043590 "bacterial nucleoid" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043590 KO:K05592 OMA:IIDHINR
ProtClustDB:CLSK915749 HSSP:Q58083 EMBL:AE016877 RefSeq:NP_830127.1
STRING:Q81IT9 DNASU:1202612 EnsemblBacteria:EBBACT00000032730
GeneID:1202612 GenomeReviews:AE016877_GR KEGG:bce:BC0259
PATRIC:32596146 BioCyc:BCER226900:GJEU-261-MONOMER Uniprot:Q81IT9
Length = 533
Score = 419 (152.6 bits), Expect = 1.5e-38, P = 1.5e-38
Identities = 129/435 (29%), Positives = 202/435 (46%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F E G+S ++++ + G+ + T +Q T+ L+GKD + +A+TGTGK+ AF LP ++
Sbjct: 4 FRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLDK 63
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
V T + Q + ++ PTRELA Q+ E + K H + +L + GG
Sbjct: 64 V--DTHKESVQGI------VIAPTRELAIQVGEELYKIGK-HKRVRILPIYGGQDINRQI 114
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
R L+ P I+V TPGR+LDHI K+ +RL ++ +VLDEAD +L++GF +D+E I+
Sbjct: 115 RALKKHP-HIIVGTPGRILDHINRKT---LRLQNVETVVLDEADEMLNMGFIEDIEAILT 170
Query: 561 CLPRRRQSLLFSATMPKEL--VLKREHTYIDTVGLGSVE-TPVKIKQSCLVAPHELHFQI 617
+P Q+LLFSATMP + + +R T + + + E T I+Q L + F +
Sbjct: 171 DVPETHQTLLFSATMPDPIRRIAERFMTEPQHIKVKAKEVTMPNIQQFYLEVQEKKKFDV 230
Query: 618 LHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEF 677
L LL + +P+ IVF T L L ++ Q R + +F
Sbjct: 231 LTRLLD---IQSPEL-AIVFGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKRMSVLRKF 286
Query: 678 RASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXXXXXXXVLLLAP 737
+ +LV +DV+ARG+D VT V IP D E Y+H +L + P
Sbjct: 287 KEGSIEVLVATDVAARGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAGKKGIAMLFVTP 346
Query: 738 WEEYFXXXXXXXXXXXXXXXXXNPEIQLQMDNHMAKIDNNVKEAAYHAWLGYYNSIREI- 796
E P + ++ I ++ + L YY I E
Sbjct: 347 -RESGQLKNIERTTKRKMDRMDAPTLDEALEGQQRLIAEKLQSTIENENLAYYKRIAEEM 405
Query: 797 --GRDKTTLVELANK 809
D T+V A K
Sbjct: 406 LEENDSVTVVAAALK 420
>UNIPROTKB|Q81VG0 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:1392 "Bacillus anthracis" [GO:0003723 "RNA binding"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] [GO:0043590 "bacterial nucleoid"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043590
HOGENOM:HOG000268810 KO:K05592 OMA:IIDHINR ProtClustDB:CLSK915749
RefSeq:NP_842800.1 RefSeq:YP_016853.1 RefSeq:YP_026518.1
HSSP:Q58083 ProteinModelPortal:Q81VG0 DNASU:1087008
EnsemblBacteria:EBBACT00000010496 EnsemblBacteria:EBBACT00000018111
EnsemblBacteria:EBBACT00000022275 GeneID:1087008 GeneID:2818435
GeneID:2849489 KEGG:ban:BA_0247 KEGG:bar:GBAA_0247 KEGG:bat:BAS0233
BioCyc:BANT260799:GJAJ-255-MONOMER
BioCyc:BANT261594:GJ7F-263-MONOMER Uniprot:Q81VG0
Length = 528
Score = 419 (152.6 bits), Expect = 1.5e-38, P = 1.5e-38
Identities = 129/435 (29%), Positives = 202/435 (46%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F E G+S ++++ + G+ + T +Q T+ L+GKD + +A+TGTGK+ AF LP ++
Sbjct: 4 FRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLDK 63
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
V T + Q + ++ PTRELA Q+ E + K H + +L + GG
Sbjct: 64 V--DTHKESVQGI------VIAPTRELAIQVGEELYKIGK-HKRVRILPIYGGQDINRQI 114
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
R L+ P I+V TPGR+LDHI K+ +RL ++ +VLDEAD +L++GF +D+E I+
Sbjct: 115 RALKKHP-HIIVGTPGRILDHINRKT---LRLQNVETVVLDEADEMLNMGFIEDIEAILT 170
Query: 561 CLPRRRQSLLFSATMPKEL--VLKREHTYIDTVGLGSVE-TPVKIKQSCLVAPHELHFQI 617
+P Q+LLFSATMP + + +R T + + + E T I+Q L + F +
Sbjct: 171 DVPETHQTLLFSATMPDPIRRIAERFMTEPQHIKVKAKEVTMPNIQQFYLEVQEKKKFDV 230
Query: 618 LHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEF 677
L LL + +P+ IVF T L L ++ Q R + +F
Sbjct: 231 LTRLLD---IQSPEL-AIVFGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKRMSVLRKF 286
Query: 678 RASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXXXXXXXVLLLAP 737
+ +LV +DV+ARG+D VT V IP D E Y+H +L + P
Sbjct: 287 KEGSIEVLVATDVAARGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAGKKGIAMLFVTP 346
Query: 738 WEEYFXXXXXXXXXXXXXXXXXNPEIQLQMDNHMAKIDNNVKEAAYHAWLGYYNSIREI- 796
E P + ++ I ++ + L YY I E
Sbjct: 347 -RESGQLKNIERTTKRKMDRMDAPTLDEALEGQQRLIAEKLQSTIENENLAYYKRIAEEM 405
Query: 797 --GRDKTTLVELANK 809
D T+V A K
Sbjct: 406 LEENDSVTVVAAALK 420
>UNIPROTKB|Q9KMW4 [details] [associations]
symbol:VC_A0204 "ATP-dependent RNA helicase RhlE"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0008152 "metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE003853 GenomeReviews:AE003853_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 KO:K11927 PIR:E82488
RefSeq:NP_232603.1 ProteinModelPortal:Q9KMW4 DNASU:2612352
GeneID:2612352 KEGG:vch:VCA0204 PATRIC:20084977 OMA:AISFCDA
ProtClustDB:CLSK869561 Uniprot:Q9KMW4
Length = 451
Score = 419 (152.6 bits), Expect = 1.5e-38, P = 1.5e-38
Identities = 114/342 (33%), Positives = 180/342 (52%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F G+S +KA+ GY + +Q + A L GKD + A+TGTGK+ F LP +E
Sbjct: 3 FTSLGLSAPILKAIEEKGYNTPSPIQLQAIPAVLAGKDVMAAAQTGTGKTAGFTLPILEL 62
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+ K Q + LIL PTRELA+QI + + L H + + GG +
Sbjct: 63 LAKGPKVRANQ----VRALILTPTRELAAQIQ-DNVMLYGRHLPLKSAVVFGGVKINPQM 117
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
+R+ ILVATPGRL+D + N++ +V+ L++LVLDEAD +LD+GF +D+ I+
Sbjct: 118 QRM-CKGADILVATPGRLMD-LYNQN--AVKFDQLEILVLDEADRMLDMGFIRDIHKILK 173
Query: 561 CLPRRRQSLLFSATMP---KELVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQ- 616
LP +RQ+LLFSAT +EL + ++ + + + + + C+ P ++ +
Sbjct: 174 LLPEKRQNLLFSATFSTEIRELAKGLVNNPVE-ISVSPANSTARTVEQCIY-PADVKKKP 231
Query: 617 -ILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISE 675
+L L+KE G +V+VF T + L L E + ++ K Q R R
Sbjct: 232 DMLVKLVKE---GNWQ-QVLVFMRTKHGANRLATYLNEQGLTAAAIHGNKSQGARTRALA 287
Query: 676 EFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 717
+F+A + ILV +D++ARG+D P + VV +P E Y+H
Sbjct: 288 DFKAGEVRILVATDIAARGIDIPQLPQVVNFELPKIAEDYVH 329
>TIGR_CMR|BA_0247 [details] [associations]
symbol:BA_0247 "ATP-dependent RNA helicase, DEAD/DEAH box
family" species:198094 "Bacillus anthracis str. Ames" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043590
HOGENOM:HOG000268810 KO:K05592 OMA:IIDHINR ProtClustDB:CLSK915749
RefSeq:NP_842800.1 RefSeq:YP_016853.1 RefSeq:YP_026518.1
HSSP:Q58083 ProteinModelPortal:Q81VG0 DNASU:1087008
EnsemblBacteria:EBBACT00000010496 EnsemblBacteria:EBBACT00000018111
EnsemblBacteria:EBBACT00000022275 GeneID:1087008 GeneID:2818435
GeneID:2849489 KEGG:ban:BA_0247 KEGG:bar:GBAA_0247 KEGG:bat:BAS0233
BioCyc:BANT260799:GJAJ-255-MONOMER
BioCyc:BANT261594:GJ7F-263-MONOMER Uniprot:Q81VG0
Length = 528
Score = 419 (152.6 bits), Expect = 1.5e-38, P = 1.5e-38
Identities = 129/435 (29%), Positives = 202/435 (46%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F E G+S ++++ + G+ + T +Q T+ L+GKD + +A+TGTGK+ AF LP ++
Sbjct: 4 FRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLDK 63
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
V T + Q + ++ PTRELA Q+ E + K H + +L + GG
Sbjct: 64 V--DTHKESVQGI------VIAPTRELAIQVGEELYKIGK-HKRVRILPIYGGQDINRQI 114
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
R L+ P I+V TPGR+LDHI K+ +RL ++ +VLDEAD +L++GF +D+E I+
Sbjct: 115 RALKKHP-HIIVGTPGRILDHINRKT---LRLQNVETVVLDEADEMLNMGFIEDIEAILT 170
Query: 561 CLPRRRQSLLFSATMPKEL--VLKREHTYIDTVGLGSVE-TPVKIKQSCLVAPHELHFQI 617
+P Q+LLFSATMP + + +R T + + + E T I+Q L + F +
Sbjct: 171 DVPETHQTLLFSATMPDPIRRIAERFMTEPQHIKVKAKEVTMPNIQQFYLEVQEKKKFDV 230
Query: 618 LHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEF 677
L LL + +P+ IVF T L L ++ Q R + +F
Sbjct: 231 LTRLLD---IQSPEL-AIVFGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKRMSVLRKF 286
Query: 678 RASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXXXXXXXVLLLAP 737
+ +LV +DV+ARG+D VT V IP D E Y+H +L + P
Sbjct: 287 KEGSIEVLVATDVAARGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAGKKGIAMLFVTP 346
Query: 738 WEEYFXXXXXXXXXXXXXXXXXNPEIQLQMDNHMAKIDNNVKEAAYHAWLGYYNSIREI- 796
E P + ++ I ++ + L YY I E
Sbjct: 347 -RESGQLKNIERTTKRKMDRMDAPTLDEALEGQQRLIAEKLQSTIENENLAYYKRIAEEM 405
Query: 797 --GRDKTTLVELANK 809
D T+V A K
Sbjct: 406 LEENDSVTVVAAALK 420
>TIGR_CMR|CPS_3215 [details] [associations]
symbol:CPS_3215 "putative ATP-dependent RNA helicase SrmB"
species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0008186
"RNA-dependent ATPase activity" evidence=ISS] [GO:0042254 "ribosome
biogenesis" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
GO:GO:0042254 EMBL:CP000083 GenomeReviews:CP000083_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 RefSeq:YP_269911.1 ProteinModelPortal:Q47Z59
STRING:Q47Z59 GeneID:3520324 KEGG:cps:CPS_3215 PATRIC:21469413
OMA:PKFIVAT ProtClustDB:CLSK869483
BioCyc:CPSY167879:GI48-3264-MONOMER Uniprot:Q47Z59
Length = 448
Score = 419 (152.6 bits), Expect = 1.5e-38, P = 1.5e-38
Identities = 116/371 (31%), Positives = 190/371 (51%)
Query: 380 RFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIE 439
+F + G+ + + G+ + T++Q+ + A + G D + +KTG+GK++AF++PA++
Sbjct: 2 QFSDFGLDSALMSTIEHMGFNEPTQIQQQAIPAAMAGHDLIASSKTGSGKTLAFIIPALQ 61
Query: 440 AVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVD 499
+ K + S P V+IL PTRELA Q+ ++ N VL L GG F
Sbjct: 62 RLSKNRALSKRD---P-RVVILTPTRELAKQVFSQLRLFTANTQYKAVLIL-GGENFNDQ 116
Query: 500 QRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIV 559
+ L+ +P + +VATPGRL DH+ G L GL++L+LDEAD +LDLGF K++ I
Sbjct: 117 VKVLQKEP-EFIVATPGRLADHLTQ--G-HFHLNGLELLILDEADRMLDLGFSKELTQIN 172
Query: 560 DCLP-RRRQSLLFSATMPKELVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELH---- 614
R+RQ+LLFSAT+ +H ++ + E K K+ + A H H
Sbjct: 173 KAADHRKRQTLLFSATL--------DHAQVNEF---ATELLTKPKRIAINAGHSEHVDIA 221
Query: 615 --FQILHHL-----LKEHILGTP-DYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKP 666
F + +L L +H L T ++I+F +T T L LL E +N +
Sbjct: 222 KRFYLADNLTQKEALLQHFLVTEKSQQIIIFTATRSDTDRLAKLLTEQNLNAVALSGELN 281
Query: 667 QLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXX 726
Q R++I E F + ILVT+D+++RG+D +V+ V+ +P E+++H
Sbjct: 282 QGQRNQIMESFSKGQHKILVTTDLASRGLDLINVSHVINFDMPKHTEEFVHRIGRTGRAG 341
Query: 727 XXXXXVLLLAP 737
+ L+ P
Sbjct: 342 TKGDAISLVGP 352
>TIGR_CMR|VC_A0204 [details] [associations]
symbol:VC_A0204 "ATP-dependent RNA helicase RhlE"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE003853 GenomeReviews:AE003853_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 KO:K11927 PIR:E82488
RefSeq:NP_232603.1 ProteinModelPortal:Q9KMW4 DNASU:2612352
GeneID:2612352 KEGG:vch:VCA0204 PATRIC:20084977 OMA:AISFCDA
ProtClustDB:CLSK869561 Uniprot:Q9KMW4
Length = 451
Score = 419 (152.6 bits), Expect = 1.5e-38, P = 1.5e-38
Identities = 114/342 (33%), Positives = 180/342 (52%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F G+S +KA+ GY + +Q + A L GKD + A+TGTGK+ F LP +E
Sbjct: 3 FTSLGLSAPILKAIEEKGYNTPSPIQLQAIPAVLAGKDVMAAAQTGTGKTAGFTLPILEL 62
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+ K Q + LIL PTRELA+QI + + L H + + GG +
Sbjct: 63 LAKGPKVRANQ----VRALILTPTRELAAQIQ-DNVMLYGRHLPLKSAVVFGGVKINPQM 117
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
+R+ ILVATPGRL+D + N++ +V+ L++LVLDEAD +LD+GF +D+ I+
Sbjct: 118 QRM-CKGADILVATPGRLMD-LYNQN--AVKFDQLEILVLDEADRMLDMGFIRDIHKILK 173
Query: 561 CLPRRRQSLLFSATMP---KELVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQ- 616
LP +RQ+LLFSAT +EL + ++ + + + + + C+ P ++ +
Sbjct: 174 LLPEKRQNLLFSATFSTEIRELAKGLVNNPVE-ISVSPANSTARTVEQCIY-PADVKKKP 231
Query: 617 -ILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISE 675
+L L+KE G +V+VF T + L L E + ++ K Q R R
Sbjct: 232 DMLVKLVKE---GNWQ-QVLVFMRTKHGANRLATYLNEQGLTAAAIHGNKSQGARTRALA 287
Query: 676 EFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 717
+F+A + ILV +D++ARG+D P + VV +P E Y+H
Sbjct: 288 DFKAGEVRILVATDIAARGIDIPQLPQVVNFELPKIAEDYVH 329
>TAIR|locus:2087852 [details] [associations]
symbol:PMH2 "putative mitochondrial RNA helicase 2"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA;ISS] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005618
"cell wall" evidence=IDA] [GO:0000373 "Group II intron splicing"
evidence=IMP] [GO:0009409 "response to cold" evidence=IEP]
[GO:0043234 "protein complex" evidence=IDA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005739 GO:GO:0005524
GO:GO:0005618 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0043234
GO:GO:0005730 GO:GO:0009409 GO:GO:0003723 EMBL:AB022215
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0000373 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
EMBL:AY062502 EMBL:AY093256 IPI:IPI00524382 RefSeq:NP_188872.2
UniGene:At.27322 ProteinModelPortal:Q9LUW5 SMR:Q9LUW5 STRING:Q9LUW5
PaxDb:Q9LUW5 PRIDE:Q9LUW5 EnsemblPlants:AT3G22330.1 GeneID:821802
KEGG:ath:AT3G22330 GeneFarm:1033 TAIR:At3g22330
HOGENOM:HOG000268800 InParanoid:Q9LUW5 OMA:HGRGRNP PhylomeDB:Q9LUW5
ProtClustDB:CLSN2684125 Genevestigator:Q9LUW5 GermOnline:AT3G22330
Uniprot:Q9LUW5
Length = 616
Score = 431 (156.8 bits), Expect = 2.3e-38, P = 2.3e-38
Identities = 117/341 (34%), Positives = 181/341 (53%)
Query: 383 ECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVL 442
E GISP +KAL++ G ++ +Q+A L +EG+D + +A+TGTGK++AF +P I+ ++
Sbjct: 108 ELGISPEIVKALSSKGIEKLFPIQKAVLEPAMEGRDMIGRARTGTGKTLAFGIPIIDKII 167
Query: 443 KATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRR 502
K + P L+L PTRELA Q+ E ++ + + L GGT R+
Sbjct: 168 KYNAKHGRGRNP--LCLVLAPTRELARQVEKE---FRESAPSLDTICLYGGTPIGQQMRQ 222
Query: 503 LESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCL 562
L+ + V TPGR++D + K G ++ L ++ +VLDEAD +L +GF +DVE I++ L
Sbjct: 223 LDYG-VDVAVGTPGRVIDLM--KRG-ALNLSEVQFVVLDEADQMLQVGFAEDVEIILEKL 278
Query: 563 PRRRQSLLFSATMP---KELVLK--REHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQI 617
P +RQS++FSATMP + L K +D VG + I ++A I
Sbjct: 279 PEKRQSMMFSATMPSWIRSLTKKYLNNPLTVDLVGDSDQKLADGITTYSIIADSYGRASI 338
Query: 618 LHHLLKEHILGTPDYKVIVFCSTGM-VTSLLYLLLREMKMNVREMYSRKPQLYRDRISEE 676
+ L+ EH G K IVF T L Y L R K ++ Q R+R
Sbjct: 339 IGPLVTEHAKGG---KCIVFTQTKRDADRLSYALARSFKCEA--LHGDISQSQRERTLAG 393
Query: 677 FRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 717
FR ILV +DV+ARG+D P+V ++ +P + E ++H
Sbjct: 394 FRDGHFNILVATDVAARGLDVPNVDLIIHYELPNNTETFVH 434
>WB|WBGene00021277 [details] [associations]
symbol:Y23H5B.6 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0040035 "hermaphrodite
genitalia development" evidence=IMP] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0009792 GO:GO:0040007 GO:GO:0040010 GO:GO:0002119
GO:GO:0003723 GO:GO:0040035 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K14776 InterPro:IPR025313 Pfam:PF13959
HOGENOM:HOG000268801 GeneTree:ENSGT00550000074980 OMA:ADKVIEP
HSSP:P10081 EMBL:FO080963 RefSeq:NP_490989.1
ProteinModelPortal:Q9N478 SMR:Q9N478 STRING:Q9N478 PaxDb:Q9N478
EnsemblMetazoa:Y23H5B.6 GeneID:171810 KEGG:cel:CELE_Y23H5B.6
UCSC:Y23H5B.6 CTD:171810 WormBase:Y23H5B.6 InParanoid:Q9N478
NextBio:872791 Uniprot:Q9N478
Length = 732
Score = 435 (158.2 bits), Expect = 3.8e-38, P = 3.8e-38
Identities = 136/469 (28%), Positives = 223/469 (47%)
Query: 380 RFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIE 439
RF++ +S T++ L Y + T +Q T++ L G D V AKTG+GK++A ++P +E
Sbjct: 77 RFEDFPLSWRTLEGLKDNDYTKPTEIQRDTIAYSLTGSDVVGAAKTGSGKTLALVIPVLE 136
Query: 440 AVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVD 499
A+ +A S L LI+ PTRELA Q + I + H G ++GG+ +
Sbjct: 137 ALWRAKWSPDYGLG----ALIISPTRELALQTFS-TINAVGAHHGFSCGLVIGGSDVAFE 191
Query: 500 QRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIV 559
+ R+ I+V TPGRLL H++ + +S L++LVLDEAD +LD+GF K + +I+
Sbjct: 192 RNRISG--INIIVCTPGRLLQHMDENAQMSCD--SLQVLVLDEADRMLDMGFSKQLNSII 247
Query: 560 DCLPRRRQSLLFSATMP---KEL--VLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELH 614
+ LP RQ+LLFSAT K+L V + ++ S TP +KQS ++ E
Sbjct: 248 NNLPAERQTLLFSATQTRNVKDLCRVCTNDPVFVSVHENASAATPDNLKQSYVIVEEEHK 307
Query: 615 FQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK--MNVREMYSRKPQLYRDR 672
L ++ H K +VF S+ L +++ + V ++ Q R
Sbjct: 308 INALWSFIEAH----RKKKSLVFVSSCKQARFLTEAFSQLRPGLPVMGLWGTMNQKKRIE 363
Query: 673 ISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXXXXXXXV 732
+F SK +L+ +DV++RG+D+ + V+QV P + YIH +
Sbjct: 364 TFTKFDESKAAVLIATDVASRGLDFEHIDWVIQVDCPAQIDDYIHRVGRSARMDDSGNSL 423
Query: 733 LLLAPWEEYFXXXXXXXXXXXXXXXXXNPE----IQLQMDNHMAKIDNNVKEAAYHAWLG 788
L+++P +E +P+ +++++ +A+ +KE A + +
Sbjct: 424 LMVSPSQEEAMIGKLEKHSIPIEELKIHPDAMSDVRVKLRAILAE-SQELKEYAQKSIVA 482
Query: 789 YYNSIREIGRDKTTLVEL--ANKFAQSIGLQRPPPL--FRKTALKMGLK 833
Y SI + K VE A A S GL P + K A K G K
Sbjct: 483 YLRSIYTMKDKKVFDVEAIDAAALADSFGLVSVPRVRFLNKKAKKSGEK 531
>POMBASE|SPBC543.06c [details] [associations]
symbol:dbp8 "ATP-dependent RNA helicase Dbp8
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=ISM]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=ISO;IDA] [GO:0006364 "rRNA processing" evidence=ISO]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 PomBase:SPBC543.06c GO:GO:0005524 GO:GO:0005730
EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K14778 HOGENOM:HOG000268802 OMA:EVRTVEQ OrthoDB:EOG4PP1RW
RefSeq:NP_596794.1 ProteinModelPortal:Q9HGM5 STRING:Q9HGM5
EnsemblFungi:SPBC543.06c.1 GeneID:2541069 KEGG:spo:SPBC543.06c
NextBio:20802183 Uniprot:Q9HGM5
Length = 453
Score = 415 (151.1 bits), Expect = 4.2e-38, P = 4.2e-38
Identities = 125/354 (35%), Positives = 182/354 (51%)
Query: 377 SQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLP 436
++K F + GISP I L A + T +QE ++ LEG++ + AKTG+GK+ AF LP
Sbjct: 5 TRKSFSDLGISPWLIDTLKALAIYEPTDIQEGVIAQILEGRNCIGGAKTGSGKTAAFALP 64
Query: 437 AIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRF 496
IE K S I+ LIL PTRELA QI + AL N + L +VGG
Sbjct: 65 IIEKWSKDPSG--------IFALILTPTRELAIQIDEQFAALGANLNLKHAL-IVGGMDM 115
Query: 497 KVDQRRLESDPCQILVATPGRLLDHIENKSGLSVR-LMGLKMLVLDEADHLLDLGFRKDV 555
L P ++VATPGRL D I + ++ L +K LV+DEAD LL F D+
Sbjct: 116 IRQSIDLSKRP-HVVVATPGRLADLIRSNGEETIAGLRRIKFLVMDEADRLLSPTFADDL 174
Query: 556 ENIVDCLPRR--RQSLLFSATMP---KELVLKREHTYIDTVGLGSVET-----PVKIKQS 605
++ LP RQ+LLF+AT+ ++L + + + L VET P ++QS
Sbjct: 175 DDCFSVLPASEDRQTLLFTATVTDAIRQLKYQPQKNNKPPLWLYEVETDNISVPSTLQQS 234
Query: 606 CLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRK 665
+ ++ L HLL I I+F + L+Y +LR +++ V E++S
Sbjct: 235 YIFVSSQVREAYLVHLLT--IPENAKKSAIIFVNRTRTAELIYSILRLLELRVTELHSEM 292
Query: 666 PQLYRDRISE--EFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 717
Q R+RI+ FRA ILV +DV++RG+D P V V+ +P D + YIH
Sbjct: 293 VQ--RERINSLGRFRAEAAKILVATDVASRGLDIPSVQLVINFDLPRDPDDYIH 344
>POMBASE|SPBC691.04 [details] [associations]
symbol:SPBC691.04 "mitochondrial ATP-dependent RNA
helicase Mss116 (predicted)" species:4896 "Schizosaccharomyces
pombe" [GO:0003723 "RNA binding" evidence=IEA] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005524
"ATP binding" evidence=ISM] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0005759 "mitochondrial matrix" evidence=ISS]
[GO:0006417 "regulation of translation" evidence=IEA] [GO:0008380
"RNA splicing" evidence=ISS] [GO:0032543 "mitochondrial
translation" evidence=NAS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 PomBase:SPBC691.04 GO:GO:0005524
GO:GO:0006417 GO:GO:0008380 GO:GO:0005759 EMBL:CU329671
GO:GO:0006397 GenomeReviews:CU329671_GR GO:GO:0003723 GO:GO:0032543
EMBL:AB004535 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
RefSeq:NP_595596.1 ProteinModelPortal:O13622 STRING:O13622
EnsemblFungi:SPBC691.04.1 GeneID:2541136 KEGG:spo:SPBC691.04
OrthoDB:EOG437VPN NextBio:20802249 Uniprot:O13622
Length = 535
Score = 415 (151.1 bits), Expect = 4.2e-38, P = 4.2e-38
Identities = 122/372 (32%), Positives = 186/372 (50%)
Query: 381 FDECGISPLTIK-ALTAAGYIQMTRVQEATLSACLEGKD-AVVKAKTGTGKSIAFLLPAI 438
F E T K +L+ AG+ +MT VQ+ L+ ++ AVV+AKTGTGK++AFLL A
Sbjct: 39 FSEVASLSSTFKNSLSRAGFEKMTPVQQRVLNEVFPNEENAVVQAKTGTGKTLAFLLVAF 98
Query: 439 EAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
+ VLK + I+ +IL PTRELA QI EA L GI V +GG
Sbjct: 99 KDVLKGKPRLNSS---KIHSVILSPTRELALQIFEEARKLTYG-TGIRVSYAIGGNSKMR 154
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
++ + +L+ATPGRL DH++N L + +LDEAD L+D+GF + + NI
Sbjct: 155 EENAIRRGNANLLIATPGRLEDHLQNPRILES--LSTDSFILDEADRLMDMGFAESILNI 212
Query: 559 VDCLPRRR-QSLLFSATMPKEL------VLKREHTYIDTVGLGSVETPVKIKQSCLVAPH 611
+ + + + L FSATMP ++ +L + I+ + T ++ Q +
Sbjct: 213 HEAVTTTKTRKLCFSATMPPKVSNVFRGILGTDFKLINCLDPNEPPTHERVPQFVIETKL 272
Query: 612 ELHFQILHHLLKEHILGTPDYKVIVFCST-GMVTSLLYLLLREMKMNVREMYSRKPQLYR 670
+ F LL++ P ++IVF T MV + +L +K+ ++S R
Sbjct: 273 DKVFSSSLSLLQQLTSSNPSSRIIVFLPTISMVDFVGGVLENHLKIPCFILHSGLTTAQR 332
Query: 671 DRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXXXXXX 730
I+E FR + IL +DV ARGMD+P++T VVQ+ P + + YIH
Sbjct: 333 RSITESFRKCQSGILFATDVVARGMDFPNITQVVQITGPSNTDDYIHRIGRTGRAGKTGE 392
Query: 731 XVLLLAPWEEYF 742
L+L E+ F
Sbjct: 393 AYLILLEQEKPF 404
>ASPGD|ASPL0000069536 [details] [associations]
symbol:AN7424 species:162425 "Emericella nidulans"
[GO:0000464 "endonucleolytic cleavage in ITS1 upstream of 5.8S rRNA
from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0030687 "preribosome, large subunit precursor"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0003723 EMBL:AACD01000129 EMBL:BN001304 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
eggNOG:COG0513 HOGENOM:HOG000268804 KO:K14811 RefSeq:XP_680693.1
GeneID:2869574 KEGG:ani:AN7424.2 OrthoDB:EOG42JS0S Uniprot:Q5AWA6
Length = 488
Score = 414 (150.8 bits), Expect = 5.3e-38, P = 5.3e-38
Identities = 120/330 (36%), Positives = 176/330 (53%)
Query: 398 GYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLVPPIY 457
G+ T +Q AT G+D + A+TG+GK++AF LP ++ VL + + P+
Sbjct: 92 GFASPTAIQSATWPLLFAGRDVIGIAETGSGKTLAFGLPCLKKVLDLKTKQKS--CRPLA 149
Query: 458 VLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILVATPGR 517
V+I PTRELA QI + + + D I V + GG K D++R ++VATPGR
Sbjct: 150 VVI-SPTRELAMQIYDQLVKFAEKVD-IQVACIFGGV--KKDEQREALKSAAVVVATPGR 205
Query: 518 LLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLP-RRRQSLLFSATMP 576
L D ++N L L +K LVLDEAD +LD GF +D+++I+ +P +RQ+++F+AT P
Sbjct: 206 LKD-LQNDGSLD--LGRVKYLVLDEADRMLDKGFEQDIKDIISPMPVSKRQTVMFTATWP 262
Query: 577 KELVLKREHTYID---TVGLG---SVETPV--KIKQSC-LVAPHELHFQILHHLLKEHIL 627
+V T++ TV +G S + +IKQ +V PHE Q L +L H
Sbjct: 263 P-IVRNLASTFMTSPVTVTIGGDPSADPRANSRIKQVVEVVKPHEKE-QRLVQILNRHQR 320
Query: 628 GTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEFRASKRLILVT 687
GTPD KV+ FC + LLR V ++ Q R R E F++ +LV
Sbjct: 321 GTPD-KVLAFCLYKKEAMRVERLLRTKGFKVAGIHGDLSQQERFRSLEAFKSGAATVLVA 379
Query: 688 SDVSARGMDYPDVTSVVQVGIPPDREQYIH 717
+DV+ARG+D P V VV V P E Y+H
Sbjct: 380 TDVAARGLDIPHVKLVVNVTFPLTVEDYVH 409
>TIGR_CMR|CPS_1418 [details] [associations]
symbol:CPS_1418 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 OMA:FRNLCAI
HOGENOM:HOG000268807 RefSeq:YP_268161.1 ProteinModelPortal:Q485V4
GeneID:3523021 KEGG:cps:CPS_1418 PATRIC:21466051
BioCyc:CPSY167879:GI48-1499-MONOMER Uniprot:Q485V4
Length = 401
Score = 413 (150.4 bits), Expect = 6.9e-38, P = 6.9e-38
Identities = 114/343 (33%), Positives = 181/343 (52%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F +S + A+ GY + T +Q+ + L GKD + A+TGTGK+ +F+LP +E
Sbjct: 3 FSTLKLSTPILNAIADLGYTKPTAIQQKAIPVVLAGKDIIAAAQTGTGKTASFVLPLLEQ 62
Query: 441 VLKATSSSTTQL-VPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVD 499
+ + +L I LIL PTRELA Q+ A K D I + + GG +
Sbjct: 63 LNSQYKETGKKLRAKRIRALILVPTRELAVQVEASISQYAKYLD-ISSMAMYGGVDAQEQ 121
Query: 500 QRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIV 559
++RL ILVATPGRLLD + + L MLVLDEAD +LD+GF D+ I+
Sbjct: 122 KQRLIWG-VDILVATPGRLLDMTHQRV---LHFDELDMLVLDEADRMLDMGFIDDINKII 177
Query: 560 DCLPRRRQSLLFSATMPKEL--VLKRE-HTYID-TVGLGSVETPVKIKQSCLVAPHELHF 615
+ LP RQ+LLFSATM +E+ + KR H ++ ++G P KI+Q LV + +
Sbjct: 178 ERLPEHRQNLLFSATMSEEVRGLAKRTIHKPVEISIGADKASKP-KIEQ-WLVTVDKAN- 234
Query: 616 QILHHLLKEHILGTPDYK-VIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRIS 674
L HI+ T +++ ++F T + L L + + ++S + Q R++I
Sbjct: 235 ---KSALLSHIITTQNWQQALIFIETKHGAAKLVSQLEKRGIVAESIHSGRAQDIREKIL 291
Query: 675 EEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 717
+F++ K LV + ++ARG+D +++ V+ +P + YIH
Sbjct: 292 NDFKSGKIKFLVATAIAARGLDIGELSRVINYDLPAQVDDYIH 334
>POMBASE|SPAC823.08c [details] [associations]
symbol:SPAC823.08c "ATP-dependent RNA helicase Rrp3
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=ISS] [GO:0005829 "cytosol" evidence=IDA] [GO:0006364 "rRNA
processing" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 PomBase:SPAC823.08c GO:GO:0005829
GO:GO:0005524 EMBL:CU329670 GO:GO:0005730 GenomeReviews:CU329670_GR
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268802 KO:K14777 OMA:IFIPSKF
OrthoDB:EOG4ZPJ3P RefSeq:NP_593835.1 ProteinModelPortal:Q9P6N8
SMR:Q9P6N8 STRING:Q9P6N8 EnsemblFungi:SPAC823.08c.1 GeneID:2543571
KEGG:spo:SPAC823.08c NextBio:20804578 Uniprot:Q9P6N8
Length = 465
Score = 413 (150.4 bits), Expect = 6.9e-38, P = 6.9e-38
Identities = 113/364 (31%), Positives = 177/364 (48%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
K F E G+ +A G+ T +Q+ + L +D + A+TG+GK+ AF LP I
Sbjct: 46 KTFKELGVIDELCEACEKLGFKTPTPIQQEAIPVVLNKRDVIGLAQTGSGKTAAFALPVI 105
Query: 439 EAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
+ + S P + ++L PTRELA QI+ E + G+ + +VGG
Sbjct: 106 QELWNNPS--------PFFAVVLAPTRELAYQIS-EQFEAIGGSIGVRSVVIVGGMDMVT 156
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
L P +LV TPGRL+DH+EN G S++ LK L++DEAD LLD+ F ++ I
Sbjct: 157 QAVALSKKP-HVLVCTPGRLMDHLENTKGFSLK--NLKYLIMDEADRLLDMDFGPIIDKI 213
Query: 559 VDCLPRRRQSLLFSATMPKELV-LKRE--HTYIDTVGLGSVETPVKIKQSCLVAPHELHF 615
+ +P R++LLFSATM ++ L+R H + T + Q L P +
Sbjct: 214 LKIIPHERRTLLFSATMTSKVEKLQRASLHQPVRVAVSSKFSTVDTLIQRYLFFPFKHKD 273
Query: 616 QILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISE 675
L +L+ E + G +I+F T T L +LLR + + ++ + Q R
Sbjct: 274 TYLVYLVNE-LAGN---SIIIFARTVNDTQRLAILLRTLGFSAIPLHGQLSQSNRLGALN 329
Query: 676 EFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXXXXXXXVLLL 735
+F++ R LV +DV+ARG+D P V V+ IP D + YIH + L+
Sbjct: 330 KFKSGARSTLVATDVAARGLDIPLVDVVINYDIPTDSKAYIHRVGRTARAGRAGKSIALV 389
Query: 736 APWE 739
++
Sbjct: 390 TQYD 393
>ASPGD|ASPL0000054998 [details] [associations]
symbol:AN0894 species:162425 "Emericella nidulans"
[GO:0000373 "Group II intron splicing" evidence=IEA] [GO:0034337
"RNA folding" evidence=IEA] [GO:0000372 "Group I intron splicing"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IEA] [GO:0033592 "RNA strand annealing activity"
evidence=IEA] [GO:0005759 "mitochondrial matrix" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:BN001308 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 EnsemblFungi:CADANIAT00001763
HOGENOM:HOG000204197 OMA:DDEVPTH Uniprot:C8VUS9
Length = 641
Score = 429 (156.1 bits), Expect = 7.2e-38, P = 7.2e-38
Identities = 125/361 (34%), Positives = 191/361 (52%)
Query: 380 RFDECG---ISPLT-IKALTAAGYIQ-MTRVQEATLSACLEGKDAVVKAKTGTGKSIAFL 434
RF E G I P ++ LT ++ MT VQ T+ ++G D + +AKTGTGK++AFL
Sbjct: 78 RFAELGERNILPRNLVENLTKHMKLETMTEVQRRTILESVKGGDMLAQAKTGTGKTVAFL 137
Query: 435 LPAIE------AVLKATSSSTTQLVP-PIYVLILCPTRELASQIAAEAIALLKNHDGIGV 487
+P +E ++LK + + ++ P I +++ PTRELA QIA EA L+ G+ V
Sbjct: 138 IPVVEKLLGDRSLLKTSYRNGRKIAPIDIRAIVISPTRELAEQIAVEAKRLVAR-TGLQV 196
Query: 488 LTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLL 547
VGGT + +L+ + C ILVATPGRL D + + + VR L VLDEAD LL
Sbjct: 197 QVAVGGTMKRAALHQLQREGCHILVATPGRLKDLLTDPTS-GVRAPKLNTFVLDEADRLL 255
Query: 548 DLGFRKDVENIVDCLPRR----RQSLLFSATMPKELV------LKREHTYIDTVGLGSVE 597
D GF ++ I LP RQ+L+FSAT+ E++ +KR+ ++ V V
Sbjct: 256 DEGFAPELMEIQHRLPDPAEVDRQTLMFSATVAPEVMGMVRSTMKRDFRFVKCVRDDEVP 315
Query: 598 TPVKIKQSCLVAPH-ELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKM 656
T + + Q ++ E L L+K+ +K IV+ + T+ + ++
Sbjct: 316 THMSVPQKAVILQGLENAMPTLLELVKKSYDPRSTFKAIVYFGSTRETNTAFEAFDQLLA 375
Query: 657 NVREMYSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYI 716
R R++ FR + IL ++DV+ARGMD+P+VT V+Q+G+P RE YI
Sbjct: 376 Q------------RTRVANWFRKCQSGILFSTDVTARGMDFPNVTHVIQIGVPKTREDYI 423
Query: 717 H 717
H
Sbjct: 424 H 424
>UNIPROTKB|Q9KS53 [details] [associations]
symbol:VC1407 "ATP-dependent RNA helicase RhlE"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0008152 "metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GenomeReviews:AE003852_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 OMA:FRNLCAI HSSP:P10081 EMBL:AE004219 PIR:D82203
RefSeq:NP_231050.1 ProteinModelPortal:Q9KS53 DNASU:2614039
GeneID:2614039 KEGG:vch:VC1407 PATRIC:20081876
ProtClustDB:CLSK874358 Uniprot:Q9KS53
Length = 397
Score = 409 (149.0 bits), Expect = 1.9e-37, P = 1.9e-37
Identities = 103/340 (30%), Positives = 179/340 (52%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F + G+S + ++ + GY + T +Q + L+G+D + A+TGTGK+ +F+LP +E
Sbjct: 3 FSQLGLSDVLVQTVAQLGYQKPTHIQTQAIPVILQGRDLIAAAQTGTGKTASFVLPILEK 62
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+ + TQ + LIL PTRELA Q+A E + G+ L + GG + +
Sbjct: 63 LRQGQ----TQRKKRVRALILVPTRELAMQVA-EKVEQYGKDTGLKSLAVFGGVDEQAQK 117
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
+RL D +LVATPGRL+D ++ V ++M+VLDEAD +LD+GF + + I+D
Sbjct: 118 QRL-IDGVDVLVATPGRLMDLYGQRA---VYFEEIEMVVLDEADRMLDMGFIESINKIID 173
Query: 561 CLPRRRQSLLFSATMPKELVLKREHTYIDT--VGLGSVE-TPVKIKQSCLVAPHELHFQI 617
CLP Q LLFSAT+ +++ + D + + + + + I Q + + +
Sbjct: 174 CLPSEVQFLLFSATLSRKVRELAKTAVRDPHEISIAANQASKSNISQWLITVDKDTKSAL 233
Query: 618 LHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEF 677
L HL+ E + ++F T + L L + ++ +S + Q R ++ E+F
Sbjct: 234 LSHLINEQQWD----QALIFIETKHGAAKLVSQLEKRGIHAEAFHSGRSQAIRAQLLEDF 289
Query: 678 RASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 717
++ K LV + V+ARG+D ++ VV +P ++Y+H
Sbjct: 290 KSGKIKYLVATGVAARGIDIDQLSRVVNYDLPFPADEYVH 329
>TIGR_CMR|VC_1407 [details] [associations]
symbol:VC_1407 "ATP-dependent RNA helicase RhlE"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GenomeReviews:AE003852_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 OMA:FRNLCAI HSSP:P10081 EMBL:AE004219 PIR:D82203
RefSeq:NP_231050.1 ProteinModelPortal:Q9KS53 DNASU:2614039
GeneID:2614039 KEGG:vch:VC1407 PATRIC:20081876
ProtClustDB:CLSK874358 Uniprot:Q9KS53
Length = 397
Score = 409 (149.0 bits), Expect = 1.9e-37, P = 1.9e-37
Identities = 103/340 (30%), Positives = 179/340 (52%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F + G+S + ++ + GY + T +Q + L+G+D + A+TGTGK+ +F+LP +E
Sbjct: 3 FSQLGLSDVLVQTVAQLGYQKPTHIQTQAIPVILQGRDLIAAAQTGTGKTASFVLPILEK 62
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+ + TQ + LIL PTRELA Q+A E + G+ L + GG + +
Sbjct: 63 LRQGQ----TQRKKRVRALILVPTRELAMQVA-EKVEQYGKDTGLKSLAVFGGVDEQAQK 117
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
+RL D +LVATPGRL+D ++ V ++M+VLDEAD +LD+GF + + I+D
Sbjct: 118 QRL-IDGVDVLVATPGRLMDLYGQRA---VYFEEIEMVVLDEADRMLDMGFIESINKIID 173
Query: 561 CLPRRRQSLLFSATMPKELVLKREHTYIDT--VGLGSVE-TPVKIKQSCLVAPHELHFQI 617
CLP Q LLFSAT+ +++ + D + + + + + I Q + + +
Sbjct: 174 CLPSEVQFLLFSATLSRKVRELAKTAVRDPHEISIAANQASKSNISQWLITVDKDTKSAL 233
Query: 618 LHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEF 677
L HL+ E + ++F T + L L + ++ +S + Q R ++ E+F
Sbjct: 234 LSHLINEQQWD----QALIFIETKHGAAKLVSQLEKRGIHAEAFHSGRSQAIRAQLLEDF 289
Query: 678 RASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 717
++ K LV + V+ARG+D ++ VV +P ++Y+H
Sbjct: 290 KSGKIKYLVATGVAARGIDIDQLSRVVNYDLPFPADEYVH 329
>SGD|S000001107 [details] [associations]
symbol:RRP3 "Protein involved in rRNA processing"
species:4932 "Saccharomyces cerevisiae" [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IDA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0000462 "maturation of
SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=IMP] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0008186 "RNA-dependent ATPase activity"
evidence=IDA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IC] [GO:0006364 "rRNA processing"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 SGD:S000001107 GO:GO:0005524
GO:GO:0005730 EMBL:BK006934 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 EMBL:U00061 HOGENOM:HOG000268802
GO:GO:0000462 GeneTree:ENSGT00670000098028 KO:K14777 OMA:IFIPSKF
OrthoDB:EOG4ZPJ3P EMBL:AY389302 EMBL:AY389303 PIR:S46713
RefSeq:NP_011932.2 ProteinModelPortal:P38712 SMR:P38712
DIP:DIP-6533N IntAct:P38712 MINT:MINT-518716 STRING:P38712
PaxDb:P38712 PeptideAtlas:P38712 EnsemblFungi:YHR065C GeneID:856462
KEGG:sce:YHR065C CYGD:YHR065c NextBio:982111 Genevestigator:P38712
GermOnline:YHR065C Uniprot:P38712
Length = 501
Score = 408 (148.7 bits), Expect = 2.4e-37, P = 2.4e-37
Identities = 120/367 (32%), Positives = 177/367 (48%)
Query: 377 SQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLP 436
S + F E + P I+A Y + T +Q + LEG D + A+TG+GK+ AF +P
Sbjct: 79 SFESFSELNLVPELIQACKNLNYSKPTPIQSKAIPPALEGHDIIGLAQTGSGKTAAFAIP 138
Query: 437 AIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRF 496
+ + P Y IL PTRELA QI E L + G+ +VGG
Sbjct: 139 ILNRLWHDQE--------PYYACILAPTRELAQQIK-ETFDSLGSLMGVRSTCIVGGMNM 189
Query: 497 KVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVE 556
R L P I++ATPGRL+DH+EN G S+R LK LV+DEAD LLD+ F ++
Sbjct: 190 MDQARDLMRKP-HIIIATPGRLMDHLENTKGFSLRK--LKFLVMDEADRLLDMEFGPVLD 246
Query: 557 NIVDCLP-RRRQSLLFSATMPKELVLKREHTYIDTVGLG---SVETPVKIKQSCLVAPHE 612
I+ +P + R + LFSATM ++ + + + V +T + Q+ +V P
Sbjct: 247 RILKIIPTQERTTYLFSATMTSKIDKLQRASLTNPVKCAVSNKYQTVDTLVQTLMVVPGG 306
Query: 613 LHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDR 672
L L +LL E I T +I+F T L L ++ + ++ Q R
Sbjct: 307 LKNTYLIYLLNEFIGKT----MIIFTRTKANAERLSGLCNLLEFSATALHGDLNQNQRMG 362
Query: 673 ISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXXXXXXXV 732
+ F+A KR ILV +DV+ARG+D P V VV IP D + YIH +
Sbjct: 363 SLDLFKAGKRSILVATDVAARGLDIPSVDIVVNYDIPVDSKSYIHRVGRTARAGRSGKSI 422
Query: 733 LLLAPWE 739
L++ ++
Sbjct: 423 SLVSQYD 429
>TAIR|locus:2084178 [details] [associations]
symbol:DRH1 "DEAD box RNA helicase 1" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] [GO:0016887 "ATPase activity" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001202 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00397
PROSITE:PS00039 PROSITE:PS01159 PROSITE:PS50020 PROSITE:PS51194
SMART:SM00456 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0000184 GO:GO:0003723
EMBL:AC009325 SUPFAM:SSF51045 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006364 GO:GO:0004004 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823
EMBL:AB010259 EMBL:AY062591 EMBL:AF428313 EMBL:AY050375
EMBL:BT000795 EMBL:BT009670 IPI:IPI00544638 IPI:IPI00545196
PIR:T52137 RefSeq:NP_001030619.1 RefSeq:NP_566141.1
RefSeq:NP_850492.1 RefSeq:NP_974206.1 UniGene:At.22096
ProteinModelPortal:Q8H136 SMR:Q8H136 IntAct:Q8H136 STRING:Q8H136
PaxDb:Q8H136 PRIDE:Q8H136 EnsemblPlants:AT3G01540.2
EnsemblPlants:AT3G01540.3 EnsemblPlants:AT3G01540.4 GeneID:821116
KEGG:ath:AT3G01540 GeneFarm:931 TAIR:At3g01540 InParanoid:Q8H136
OMA:DPSTEAY PhylomeDB:Q8H136 ProtClustDB:CLSN2687967
Genevestigator:Q8H136 GermOnline:AT3G01540 Uniprot:Q8H136
Length = 619
Score = 423 (154.0 bits), Expect = 2.5e-37, P = 2.5e-37
Identities = 119/351 (33%), Positives = 186/351 (52%)
Query: 374 PILSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAF 433
P++S F+ G P ++ + +AG+ T +Q + ++G+D V AKTG+GK++ +
Sbjct: 156 PLMS---FEATGFPPELLREVLSAGFSAPTPIQAQSWPIAMQGRDIVAIAKTGSGKTLGY 212
Query: 434 LLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGG 493
L+P + + + S ++ P I L+L PTRELA+QI EA+ ++ I L GG
Sbjct: 213 LIPGFLHLQRIRNDS--RMGPTI--LVLSPTRELATQIQEEAVKFGRS-SRISCTCLYGG 267
Query: 494 TRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRK 553
R LE I+VATPGRL D +E + + L + LVLDEAD +LD+GF
Sbjct: 268 APKGPQLRDLERG-ADIVVATPGRLNDILEMRR---ISLRQISYLVLDEADRMLDMGFEP 323
Query: 554 DVENIVDCLPRRRQSLLFSATMPKELVLKREHTYIDT--VGLGSVETPV---KIKQSC-L 607
+ IV +P +RQ+L+++AT PK + ++ V +G+V+ V I Q +
Sbjct: 324 QIRKIVKEIPTKRQTLMYTATWPKGVRKIAADLLVNPAQVNIGNVDELVANKSITQHIEV 383
Query: 608 VAPHELHFQILHHLLKEHILGTPDYKVIVFCSTG-MVTSLLYLLLREMKMNVREMYSRKP 666
VAP E + L +L+ P KVI+FCST M L L R+ ++ K
Sbjct: 384 VAPMEKQRR-LEQILRSQ---EPGSKVIIFCSTKRMCDQLTRNLTRQF--GAAAIHGDKS 437
Query: 667 QLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 717
Q RD + +FR+ + +LV +DV+ARG+D D+ +VV P E Y+H
Sbjct: 438 QPERDNVLNQFRSGRTPVLVATDVAARGLDVKDIRAVVNYDFPNGVEDYVH 488
>TIGR_CMR|CPS_1590 [details] [associations]
symbol:CPS_1590 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 RefSeq:YP_268332.1 ProteinModelPortal:Q485D3
STRING:Q485D3 GeneID:3522084 KEGG:cps:CPS_1590 PATRIC:21466379
OMA:AISECGY ProtClustDB:CLSK768209
BioCyc:CPSY167879:GI48-1671-MONOMER Uniprot:Q485D3
Length = 455
Score = 406 (148.0 bits), Expect = 4.0e-37, P = 4.0e-37
Identities = 121/380 (31%), Positives = 189/380 (49%)
Query: 382 DECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAV 441
D G+S +KA+ A GY +T +Q+ + +G D + A+TGTGK+ AF LP ++A+
Sbjct: 4 DSIGLSADLLKAVKACGYKNLTPIQQEAIPVIRQGVDLLASAQTGTGKTAAFSLPILDAI 63
Query: 442 LKAT---SSSTTQLVP-----------PIYVLILCPTRELASQIAAEAIALLKNHDGIGV 487
KA SSTT I LIL PTRELA+Q+A + I + I
Sbjct: 64 AKANHAAKSSTTSTDENSAEEKSASGQAIRALILTPTRELANQVA-DNIKQFSQYLPIKS 122
Query: 488 LTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLL 547
+ GG + Q ++ +LVATPGRLL+H+ ++ V L +K LVLDEAD +L
Sbjct: 123 GVVYGGGKM-ASQTKMLKQGLDVLVATPGRLLEHLALRN---VDLSQVKFLVLDEADRML 178
Query: 548 DLGFRKDVENIVDCLPRRRQSLLFSATMPKELVLKREHTYID---TVGLGSVETPV-KIK 603
D+GF D+E ++ + + Q+L+FSAT + V + + T+ + T KIK
Sbjct: 179 DMGFLTDIEKLLLAVKHKHQTLMFSATF-SDRVKSLANQLLKSPKTISVSKENTTSGKIK 237
Query: 604 QSCLVAPHELHFQILHHLLKEHILGTPDYK-VIVFCSTGMVTSLLYLLLREMKMNVREMY 662
Q+ E ++L L+ G +++ V+VF T + L L+ + +
Sbjct: 238 QAVYWVTEERKRELLSELI-----GVNNWQQVLVFAGTKESANTLAKELKLDGIKAALCH 292
Query: 663 SRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXX 722
K Q R++ E+F K +LV +DV+ARG+D PD+ VV +P E Y+H
Sbjct: 293 GDKTQGARNKALEQFSEGKVRVLVATDVAARGLDIPDLAFVVNFHLPFLPEDYVHRVGRT 352
Query: 723 XXXXXXXXXVLLLAPWEEYF 742
+ L++P +E F
Sbjct: 353 GRAGKSGTAISLVSPKDERF 372
>UNIPROTKB|F1NA53 [details] [associations]
symbol:DDX49 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00670000098028 EMBL:AADN02071779 EMBL:AADN02071780
IPI:IPI00684751 ProteinModelPortal:F1NA53
Ensembl:ENSGALT00000004949 ArrayExpress:F1NA53 Uniprot:F1NA53
Length = 402
Score = 405 (147.6 bits), Expect = 5.1e-37, P = 5.1e-37
Identities = 116/346 (33%), Positives = 177/346 (51%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F E G++P ++ G + T VQ + + L+G+D + AKTG+GK+ AF+LP ++
Sbjct: 4 FRELGLAPWLVEQARQMGLSRPTPVQASCIPPILQGRDCLGCAKTGSGKTAAFVLPVLQ- 62
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
VL I+ L+L PTRELA QIA E +L G+ +VGG
Sbjct: 63 VLSEDPYG-------IFCLVLTPTRELAYQIA-EQFRVLGKPLGLKDCVVVGGLDMVAQA 114
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLG---FRKDVEN 557
L P +++ATPGRL DH+ + + S++ LK LVLDEAD LL+ G F D+E
Sbjct: 115 LELSRKP-HVVIATPGRLADHLRSSNTFSLKK--LKFLVLDEADRLLEQGCADFTADLEV 171
Query: 558 IVDCLPRRRQSLLFSATMP------KELVLKREHTYIDTVGLGSVETPVKIKQSCLVAPH 611
I++ +P RRQ+LLFSAT+ K L + R + V T ++ Q L+ P
Sbjct: 172 ILEAVPARRQTLLFSATLTDTLNELKSLAMNRPFFW---EAASEVRTVDELDQRYLLVPE 228
Query: 612 ELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRD 671
+ L HL++ D+ +I+F T +L ++LR+ ++S Q R
Sbjct: 229 AVKDAYLVHLIQTFQDEHEDWSIIIFTKTCKECQILNMMLRKFSFPSVALHSMMKQRQRF 288
Query: 672 RISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 717
+F++S IL+ +DV+ARG+D P V V+ P + YIH
Sbjct: 289 AALAKFKSSIFKILIATDVAARGLDIPTVQVVINHNTPGLPKIYIH 334
>UNIPROTKB|F1NYX0 [details] [associations]
symbol:DDX49 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00670000098028 OMA:CQLLSMT EMBL:AADN02071779
EMBL:AADN02071780 IPI:IPI00822654 Ensembl:ENSGALT00000035055
ArrayExpress:F1NYX0 Uniprot:F1NYX0
Length = 482
Score = 405 (147.6 bits), Expect = 5.1e-37, P = 5.1e-37
Identities = 116/346 (33%), Positives = 177/346 (51%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F E G++P ++ G + T VQ + + L+G+D + AKTG+GK+ AF+LP ++
Sbjct: 7 FRELGLAPWLVEQARQMGLSRPTPVQASCIPPILQGRDCLGCAKTGSGKTAAFVLPVLQ- 65
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
VL I+ L+L PTRELA QIA E +L G+ +VGG
Sbjct: 66 VLSEDPYG-------IFCLVLTPTRELAYQIA-EQFRVLGKPLGLKDCVVVGGLDMVAQA 117
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLG---FRKDVEN 557
L P +++ATPGRL DH+ + + S++ LK LVLDEAD LL+ G F D+E
Sbjct: 118 LELSRKP-HVVIATPGRLADHLRSSNTFSLKK--LKFLVLDEADRLLEQGCADFTADLEV 174
Query: 558 IVDCLPRRRQSLLFSATMP------KELVLKREHTYIDTVGLGSVETPVKIKQSCLVAPH 611
I++ +P RRQ+LLFSAT+ K L + R + V T ++ Q L+ P
Sbjct: 175 ILEAVPARRQTLLFSATLTDTLNELKSLAMNRPFFW---EAASEVRTVDELDQRYLLVPE 231
Query: 612 ELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRD 671
+ L HL++ D+ +I+F T +L ++LR+ ++S Q R
Sbjct: 232 AVKDAYLVHLIQTFQDEHEDWSIIIFTKTCKECQILNMMLRKFSFPSVALHSMMKQRQRF 291
Query: 672 RISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 717
+F++S IL+ +DV+ARG+D P V V+ P + YIH
Sbjct: 292 AALAKFKSSIFKILIATDVAARGLDIPTVQVVINHNTPGLPKIYIH 337
>UNIPROTKB|Q5L3G9 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:235909 "Geobacillus kaustophilus HTA426" [GO:0003723 "RNA
binding" evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
[GO:0043590 "bacterial nucleoid" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043590 HOGENOM:HOG000268810 KO:K05592
OMA:IIDHINR HSSP:Q58083 EMBL:BA000043 RefSeq:YP_146079.1
ProteinModelPortal:Q5L3G9 GeneID:3184893 GenomeReviews:BA000043_GR
KEGG:gka:GK0226 PATRIC:21961545 ProtClustDB:CLSK712472
BioCyc:GKAU235909:GJO7-260-MONOMER Uniprot:Q5L3G9
Length = 467
Score = 404 (147.3 bits), Expect = 6.6e-37, P = 6.6e-37
Identities = 118/342 (34%), Positives = 177/342 (51%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F E G+S +KA+ G+ + T +Q T+ L+ KD + +A+TGTGK+ AF +P +E
Sbjct: 4 FQELGLSQEVMKAIERMGFEETTPIQAKTIPLSLQNKDVIGQAQTGTGKTAAFGIPIVEK 63
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEA--IALLKNHDGIGVLTLVGGTRFKV 498
V S+ + L++ PTRELA Q++ E I +K + VL + GG +
Sbjct: 64 VNVKNSA--------VQALVVAPTRELAIQVSEELYKIGAVKR---VRVLPIYGGQDIER 112
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
R L+ P ++V TPGR++DHI N+ L RL + +VLDEAD +L++GF +D+E I
Sbjct: 113 QIRALKKHP-HVIVGTPGRIIDHI-NRGTL--RLEHVHTVVLDEADEMLNMGFIEDIEAI 168
Query: 559 VDCLPRRRQSLLFSATMPKEL--VLKREHTYIDTVGLGSVETPV-KIKQSCLVAPHELHF 615
+ +P RQ+LLFSATMP + + +R + V + + E V I+Q L + F
Sbjct: 169 LSHVPAERQTLLFSATMPDPIRRIAERFMNEPELVKVKAKEMTVPNIQQYYLEVHEKKKF 228
Query: 616 QILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISE 675
IL LL + P+ IVF T L L ++ Q R +
Sbjct: 229 DILTRLLD---IQAPEL-AIVFGRTKRRVDELAEALNLRGYAAEGIHGDLSQAKRLSVLR 284
Query: 676 EFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 717
+F+ ILV +DV+ARG+D VT V IP D E Y+H
Sbjct: 285 KFKEGAIEILVATDVAARGLDISGVTHVYNFDIPQDPESYVH 326
>TIGR_CMR|GSU_0914 [details] [associations]
symbol:GSU_0914 "ATP-dependent RNA helicase RhlE"
species:243231 "Geobacter sulfurreducens PCA" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:AE017180
GenomeReviews:AE017180_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 KO:K11927 OMA:KHRAKRV RefSeq:NP_951968.1
ProteinModelPortal:Q74EP8 GeneID:2687174 KEGG:gsu:GSU0914
PATRIC:22024603 ProtClustDB:CLSK924451
BioCyc:GSUL243231:GH27-925-MONOMER Uniprot:Q74EP8
Length = 447
Score = 404 (147.3 bits), Expect = 6.6e-37, P = 6.6e-37
Identities = 111/339 (32%), Positives = 169/339 (49%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F G P + AAGY T +Q + A + G+D + A+TGTGK+ AF LP +
Sbjct: 3 FKSFGFHPAVATGIAAAGYETPTPIQAQAIPAVMAGRDVMGLAQTGTGKTAAFALPILHR 62
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+ + + L++ PTRELA QI ++ L + +T+ GG
Sbjct: 63 LQQGERGR-------VRALVIAPTRELAEQIN-DSFVTLGRQTRLRSVTVYGGVGVNPQV 114
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
++L++ +++VA PGRLLDHI G ++ L L++LVLDEAD + D+GF D+ ++
Sbjct: 115 QKLKAG-AEVVVACPGRLLDHIAQ--G-TIDLSRLEVLVLDEADQMFDMGFLPDIRRVLK 170
Query: 561 CLPRRRQSLLFSATMPKELVLKREHTYID--TVGLGSVETPVKIKQSCLVAPHELHFQIL 618
LP RRQ+LLFSATMP ++ + +D TV +G+V V + + + P E H +
Sbjct: 171 HLPPRRQTLLFSATMPIDIRTLAQDILVDPVTVQVGTVAPAVTVAHA--LYPVEQHLKT- 227
Query: 619 HHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEFR 678
LL E + T V++F T L L + + Q R + FR
Sbjct: 228 -PLLLELLRHTDTESVLIFTRTKHRAKRLGEQLEKAGYRAASLQGNLSQNRRQAALDGFR 286
Query: 679 ASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 717
ILV +D++ARG+D V+ V+ IP E YIH
Sbjct: 287 DGTFQILVATDIAARGIDVSQVSHVINYDIPDTAEAYIH 325
>FB|FBgn0037561 [details] [associations]
symbol:CG9630 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 EMBL:AE014297 GO:GO:0005524 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
InterPro:IPR025313 Pfam:PF13959 HSSP:P10081 KO:K14809
GeneTree:ENSGT00550000074969 EMBL:AY051513 RefSeq:NP_649777.1
UniGene:Dm.1101 ProteinModelPortal:Q9VHU1 SMR:Q9VHU1 IntAct:Q9VHU1
STRING:Q9VHU1 PaxDb:Q9VHU1 PRIDE:Q9VHU1 EnsemblMetazoa:FBtr0081866
GeneID:40974 KEGG:dme:Dmel_CG9630 UCSC:CG9630-RA
FlyBase:FBgn0037561 InParanoid:Q9VHU1 OMA:CACVEYW OrthoDB:EOG4TDZ1Q
PhylomeDB:Q9VHU1 GenomeRNAi:40974 NextBio:821545 Bgee:Q9VHU1
GermOnline:CG9630 Uniprot:Q9VHU1
Length = 613
Score = 419 (152.6 bits), Expect = 6.8e-37, P = 6.8e-37
Identities = 125/387 (32%), Positives = 193/387 (49%)
Query: 376 LSQKRFDECGISPLT---IKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIA 432
+S+K++ PL+ ++ + + G+ QMT VQ A + L KD +A TG+GK++A
Sbjct: 1 MSRKKWSSLDKPPLSDAVLQVVQSFGFQQMTPVQTAAIPLLLARKDVSAEAVTGSGKTLA 60
Query: 433 FLLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLT--- 489
FL+P +E +L+ T I L++ PTRELA QI+ E +A H+ + L
Sbjct: 61 FLVPMLE-ILQRRHKETPWGPKEIGALVISPTRELARQIS-EVLAQFLEHEDLEHLNQQL 118
Query: 490 LVGGTRFKVDQRRLESD-PCQILVATPGRLLDHIENKS---GLSVRLMGLKMLVLDEADH 545
+VGG + D L + PC ILV TPGRL D + K L+ ++ L+ LVLDEAD
Sbjct: 119 IVGGNSIEEDIATLRRETPC-ILVCTPGRLEDLFQRKGDDLNLAAQVKSLEFLVLDEADR 177
Query: 546 LLDLGFRKDVENIVDCLPRRRQSLLFSATMPKEL--VLK---REHTYIDTVGLGSVETPV 600
LLDLGF+ V NI+ LPR+R++ LFSAT E+ +++ R + SV TP
Sbjct: 178 LLDLGFKTSVNNILGYLPRQRRTGLFSATQTTEVTDLIRAGLRNPVLVSVKEKASVNTPA 237
Query: 601 KIKQSCLVAPHELHFQILHHLLKEHILGTPDYKVIVF-----CSTGMVTSLLYLLLREMK 655
+++ + EL F L L T KV+VF C +L LL +
Sbjct: 238 RLQNFYRIVEPELKFVALLEFLSSP--ATVIGKVMVFFPTCACVEYWAEALPPLLPKRTV 295
Query: 656 MNVREMYSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQY 715
+ + K R + E+FR + + +L+ +DV ARG+D P++ VVQ P +
Sbjct: 296 LGIHGKMKNK----RANVVEKFRNTPQAVLLCTDVLARGLDVPEIEWVVQWDPPSTASSF 351
Query: 716 IHXXXXXXXXXXXXXXVLLLAPWEEYF 742
+H ++ L P E+ +
Sbjct: 352 VHRVGRTARQGNEGNALVFLLPSEDAY 378
>ZFIN|ZDB-GENE-031030-3 [details] [associations]
symbol:ddx49 "DEAD (Asp-Glu-Ala-Asp) box polypeptide
49" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-031030-3 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 KO:K14778
HOVERGEN:HBG100512 CTD:54555 EMBL:BC047834 IPI:IPI00551936
RefSeq:NP_938179.1 UniGene:Dr.77634 ProteinModelPortal:Q7ZUT9
STRING:Q7ZUT9 GeneID:386632 KEGG:dre:386632 InParanoid:Q7ZUT9
NextBio:20813961 ArrayExpress:Q7ZUT9 Uniprot:Q7ZUT9
Length = 468
Score = 403 (146.9 bits), Expect = 8.5e-37, P = 8.5e-37
Identities = 114/346 (32%), Positives = 180/346 (52%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F+ G+S I+ G + T VQE + A L+G+D + AKTG+GK+ AF+LP
Sbjct: 4 FESLGLSEWLIQQCKQMGISRPTAVQEKCIPAILDGRDCMGCAKTGSGKTAAFVLP---- 59
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
VL+ S ++ L+L PTRELA QIA E +L G+ +VGG
Sbjct: 60 VLQKLSEDPYG----VFCLVLTPTRELAYQIA-EQFRVLGKPLGLKDCIIVGGMDMVTQG 114
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLG---FRKDVEN 557
L P ++VATPGRL DHI +S ++ L ++ L++DEAD LL+ G F KD+E
Sbjct: 115 LELSKKP-HVVVATPGRLADHI--RSSDTINLNRIQFLIMDEADRLLEQGCTDFTKDLEV 171
Query: 558 IVDCLPRRRQSLLFSATMP------KELVLKREHTYIDTVGLGSVETPVKIKQSCLVAPH 611
I+ +P +RQ+LLFSAT+ + + + R + V+T ++ Q ++ P
Sbjct: 172 ILSAVPAKRQTLLFSATLTDTLQQLQSIAMNRPFFWEHK---SDVQTVEELDQRFILTPE 228
Query: 612 ELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRD 671
++ L HL++ D+ +I+F +T +L ++LRE ++S Q R
Sbjct: 229 KVKDAYLVHLIQTFQDEHDDWSIIIFTNTCKSCQILTMMLREFNFPTISLHSMMKQRQRF 288
Query: 672 RISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 717
+F+++ IL+ +DV+ARG+D P V V+ P + YIH
Sbjct: 289 ANLAKFKSNVFKILIATDVAARGLDIPTVQVVINHNTPGLPKIYIH 334
>UNIPROTKB|E2RBM7 [details] [associations]
symbol:DDX49 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 KO:K14778
OMA:EVRTVEQ GeneTree:ENSGT00670000098028 CTD:54555
EMBL:AAEX03012274 RefSeq:XP_541930.1 ProteinModelPortal:E2RBM7
Ensembl:ENSCAFT00000023054 GeneID:484814 KEGG:cfa:484814
NextBio:20858886 Uniprot:E2RBM7
Length = 488
Score = 402 (146.6 bits), Expect = 1.1e-36, P = 1.1e-36
Identities = 115/343 (33%), Positives = 176/343 (51%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F E G+S ++ G Q T VQ + A LEG+D + AKTG+GK+ AF+LP
Sbjct: 4 FAELGLSSWLVEQCRQLGLKQPTPVQLGCIPAILEGRDCLGCAKTGSGKTAAFVLP---- 59
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+L+ S I+ L+L PTRELA QIA E +L G+ +VGG
Sbjct: 60 ILQKLSEDPYG----IFCLVLTPTRELAYQIA-EQFRVLGKPLGLKDCIIVGGMDMVAQA 114
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLG---FRKDVEN 557
L P +++ATPGRL DH+ + + S++ ++ LV+DEAD LL+ G F D+E
Sbjct: 115 LELSRKP-HVVIATPGRLADHLRSSNTFSIKK--IRFLVMDEADRLLEQGCTDFTVDLEA 171
Query: 558 IVDCLPRRRQSLLFSATMP---KELVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELH 614
I+ +P RRQ+LLFSAT+ KEL + V T ++ Q L+ P ++
Sbjct: 172 ILAAVPTRRQTLLFSATLTDTLKELQGLATNQPFFWEAQAPVRTVEQLDQRYLLVPEKVK 231
Query: 615 FQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRIS 674
L HL++ D+ +I+F +T +L ++LR+ ++S Q R
Sbjct: 232 DAYLVHLIQNFQDEHEDWSIIIFTNTCKTCQILCMMLRKFNFPTVALHSMMKQKERFAAL 291
Query: 675 EEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 717
+F++S IL+ +DV++RG+D P V V+ P + YIH
Sbjct: 292 AKFKSSIYRILIATDVASRGLDIPTVQVVINHNTPGLPKIYIH 334
>UNIPROTKB|F1S7D9 [details] [associations]
symbol:DDX49 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 KO:K14778 OMA:EVRTVEQ
GeneTree:ENSGT00670000098028 CTD:54555 EMBL:CU640483
RefSeq:XP_003123587.1 UniGene:Ssc.79767 Ensembl:ENSSSCT00000025399
GeneID:100526038 KEGG:ssc:100526038 Uniprot:F1S7D9
Length = 483
Score = 401 (146.2 bits), Expect = 1.4e-36, P = 1.4e-36
Identities = 114/343 (33%), Positives = 176/343 (51%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F E G+S ++ G Q T VQ + A LEG+D + AKTG+GK+ AF+LP
Sbjct: 4 FAELGLSSWLVEQCRQLGLKQPTPVQLGCIPAILEGRDCLGCAKTGSGKTAAFVLP---- 59
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+L+ S I+ L+L PTRELA QIA E +L G+ +VGG
Sbjct: 60 ILQKLSEDPYG----IFCLVLTPTRELAYQIA-EQFRVLGKPLGLKDCIIVGGMDMVAQA 114
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLG---FRKDVEN 557
L P +++ATPGRL DH+ + + S++ ++ LV+DEAD LL+ G F D+E
Sbjct: 115 LELSRKP-HVVIATPGRLADHLRSSNTFSIKK--IRFLVMDEADRLLEQGCTDFTVDLEA 171
Query: 558 IVDCLPRRRQSLLFSATMP---KELVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELH 614
I+ +P RRQ+LLFSAT+ +EL + V T ++ Q L+ P ++
Sbjct: 172 ILAAVPARRQTLLFSATLTDTLRELQSLATNQPFFWEAQAPVRTVEQLDQRYLLVPEKVK 231
Query: 615 FQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRIS 674
L HL++ D+ +I+F +T +L ++LR+ ++S Q R
Sbjct: 232 DAYLVHLIQNFQDEHEDWSIIIFTNTCKTCQILCMMLRKFNFPTVALHSMMKQKERFAAL 291
Query: 675 EEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 717
+F++S IL+ +DV++RG+D P V V+ P + YIH
Sbjct: 292 AKFKSSIYRILIATDVASRGLDIPTVQVVINHNTPGLPKIYIH 334
>UNIPROTKB|Q485I3 [details] [associations]
symbol:dbpA "ATP-dependent RNA helicase DbpA"
species:167879 "Colwellia psychrerythraea 34H" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268809 KO:K05591 ProtClustDB:PRK11776
InterPro:IPR005580 Pfam:PF03880 RefSeq:YP_268282.1
ProteinModelPortal:Q485I3 STRING:Q485I3 GeneID:3521612
KEGG:cps:CPS_1540 PATRIC:21466289 OMA:THEKSTI
BioCyc:CPSY167879:GI48-1621-MONOMER Uniprot:Q485I3
Length = 468
Score = 401 (146.2 bits), Expect = 1.4e-36, P = 1.4e-36
Identities = 122/368 (33%), Positives = 174/368 (47%)
Query: 377 SQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLP 436
S F + +K L++ GY QMT +Q TL L+GKD + +AKTG+GK+ AF L
Sbjct: 8 SSLAFSSLSLKQDLVKNLSSLGYEQMTPIQAKTLPELLKGKDVIGEAKTGSGKTAAFGL- 66
Query: 437 AIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRF 496
A+L + I +++CPTRELA Q+A E L + I +LTL GGT F
Sbjct: 67 ---ALLNKLEVKKFR----IQSMVICPTRELADQVAKELRKLARGIHNIKILTLCGGTPF 119
Query: 497 KVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVE 556
LE ++V TPGRL +H+ G +++L L +LVLDEAD +L++GF+ ++
Sbjct: 120 GPQIGSLEHG-AHVIVGTPGRLEEHVIK--G-TLQLDNLNLLVLDEADRMLEMGFQAALD 175
Query: 557 NIVDCLPRRRQSLLFSATMPKELVLKREHTYIDTV--GLGSVETPVKIKQSCL-VAPHEL 613
NIV P RQ+LLFSAT P ++ E D V + S E I Q V +
Sbjct: 176 NIVGRTPLDRQTLLFSATFPDQIKSISESIMTDPVMVKIASSEDQSTISQKFFKVGNDDD 235
Query: 614 HFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRI 673
L LL LG +FC+T T + L +V ++ Q RD+
Sbjct: 236 RLDALRLLL----LGNQVESTAIFCNTKKETQQVADALHFDGFSVLALHGDLEQRDRDQT 291
Query: 674 SEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXXXXXXXVL 733
F ILV +DV+ARG+D + V+ I D E ++H
Sbjct: 292 LLRFANKSASILVATDVAARGLDIDSLDLVINYHIARDSEVHVHRIGRTGRAGSTGIAYS 351
Query: 734 LLAPWEEY 741
L + E Y
Sbjct: 352 LFSDKESY 359
>UNIPROTKB|Q4K4K3 [details] [associations]
symbol:dbpA "ATP-independent RNA helicase DbpA"
species:220664 "Pseudomonas protegens Pf-5" [GO:0003724 "RNA
helicase activity" evidence=ISS] [GO:0042254 "ribosome biogenesis"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
GO:GO:0042254 EMBL:CP000076 GenomeReviews:CP000076_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268809 KO:K05591 ProtClustDB:PRK11776
InterPro:IPR005580 Pfam:PF03880 OMA:THEKSTI RefSeq:YP_262830.1
ProteinModelPortal:Q4K4K3 STRING:Q4K4K3 GeneID:3480144
KEGG:pfl:PFL_5772 PATRIC:19881049
BioCyc:PFLU220664:GIX8-5812-MONOMER Uniprot:Q4K4K3
Length = 461
Score = 401 (146.2 bits), Expect = 1.4e-36, P = 1.4e-36
Identities = 121/368 (32%), Positives = 176/368 (47%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F+ +SP + L + GY QMT +Q +L L+G D + +AKTG+GK+ AF + +
Sbjct: 8 FNTLPLSPAMLANLDSLGYAQMTPIQAQSLPVILKGMDLIAQAKTGSGKTAAFGIGLLNP 67
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+ L++CPTRELA Q+A E L + D I VLTL GG F
Sbjct: 68 INPRYFGCQA--------LVICPTRELADQVAKEVRRLARAEDNIKVLTLCGGVSFGPQI 119
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
LE I+V TPGR+ H+ + G S+ L GL LVLDEAD +LD+GF +E+I++
Sbjct: 120 ASLEHG-AHIIVGTPGRIQQHL--RKG-SLVLDGLNTLVLDEADRMLDMGFYDAIEDIIE 175
Query: 561 CLPRRRQSLLFSATMP---KELVLKREHTYIDTVGLGSVETPVKIKQSCL-VAPHELHF- 615
P RRQ+LLFSAT P K+L K TV + +I+Q ++P E
Sbjct: 176 KTPSRRQTLLFSATYPVGIKQLASKFMRDP-QTVKAEAFHDDTQIEQRFYEISPEERMSA 234
Query: 616 --QILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRI 673
++LHH P + FC T L ++ ++ Q RD++
Sbjct: 235 VTKVLHHF-------RPA-SCVAFCFTKQQVQETVDHLTAKGISAVGLHGDLEQRDRDQV 286
Query: 674 SEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXXXXXXXVL 733
F +LV +DV+ARG+D + V+ V + D E +IH V
Sbjct: 287 LAMFANRSTSVLVATDVAARGLDIDALDMVINVELARDSEIHIHRVGRTGRAGEKGIAVS 346
Query: 734 LLAPWEEY 741
L+AP E +
Sbjct: 347 LVAPSEAH 354
>TIGR_CMR|CPS_1540 [details] [associations]
symbol:CPS_1540 "ATP-dependent RNA helicase DbpA"
species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] [GO:0008186 "RNA-dependent ATPase
activity" evidence=ISS] [GO:0019843 "rRNA binding" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:CP000083
GenomeReviews:CP000083_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268809 KO:K05591 ProtClustDB:PRK11776
InterPro:IPR005580 Pfam:PF03880 RefSeq:YP_268282.1
ProteinModelPortal:Q485I3 STRING:Q485I3 GeneID:3521612
KEGG:cps:CPS_1540 PATRIC:21466289 OMA:THEKSTI
BioCyc:CPSY167879:GI48-1621-MONOMER Uniprot:Q485I3
Length = 468
Score = 401 (146.2 bits), Expect = 1.4e-36, P = 1.4e-36
Identities = 122/368 (33%), Positives = 174/368 (47%)
Query: 377 SQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLP 436
S F + +K L++ GY QMT +Q TL L+GKD + +AKTG+GK+ AF L
Sbjct: 8 SSLAFSSLSLKQDLVKNLSSLGYEQMTPIQAKTLPELLKGKDVIGEAKTGSGKTAAFGL- 66
Query: 437 AIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRF 496
A+L + I +++CPTRELA Q+A E L + I +LTL GGT F
Sbjct: 67 ---ALLNKLEVKKFR----IQSMVICPTRELADQVAKELRKLARGIHNIKILTLCGGTPF 119
Query: 497 KVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVE 556
LE ++V TPGRL +H+ G +++L L +LVLDEAD +L++GF+ ++
Sbjct: 120 GPQIGSLEHG-AHVIVGTPGRLEEHVIK--G-TLQLDNLNLLVLDEADRMLEMGFQAALD 175
Query: 557 NIVDCLPRRRQSLLFSATMPKELVLKREHTYIDTV--GLGSVETPVKIKQSCL-VAPHEL 613
NIV P RQ+LLFSAT P ++ E D V + S E I Q V +
Sbjct: 176 NIVGRTPLDRQTLLFSATFPDQIKSISESIMTDPVMVKIASSEDQSTISQKFFKVGNDDD 235
Query: 614 HFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRI 673
L LL LG +FC+T T + L +V ++ Q RD+
Sbjct: 236 RLDALRLLL----LGNQVESTAIFCNTKKETQQVADALHFDGFSVLALHGDLEQRDRDQT 291
Query: 674 SEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXXXXXXXVL 733
F ILV +DV+ARG+D + V+ I D E ++H
Sbjct: 292 LLRFANKSASILVATDVAARGLDIDSLDLVINYHIARDSEVHVHRIGRTGRAGSTGIAYS 351
Query: 734 LLAPWEEY 741
L + E Y
Sbjct: 352 LFSDKESY 359
>TAIR|locus:2087832 [details] [associations]
symbol:PMH1 "putative mitochondrial RNA helicase 1"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA;ISS] [GO:0003677 "DNA binding" evidence=IDA]
[GO:0003723 "RNA binding" evidence=IDA] [GO:0009409 "response to
cold" evidence=IEP] [GO:0009414 "response to water deprivation"
evidence=IMP] [GO:0009651 "response to salt stress" evidence=IMP]
[GO:0043234 "protein complex" evidence=IDA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0043234 GO:GO:0003677 GO:GO:0009651
GO:GO:0009409 GO:GO:0009414 GO:GO:0003723 EMBL:AB022215
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268800 ProtClustDB:CLSN2684125 EMBL:AY091091
EMBL:AJ010461 IPI:IPI00517476 PIR:T51341 RefSeq:NP_188870.1
UniGene:At.25190 ProteinModelPortal:Q9LUW6 SMR:Q9LUW6 IntAct:Q9LUW6
STRING:Q9LUW6 PaxDb:Q9LUW6 PRIDE:Q9LUW6 EnsemblPlants:AT3G22310.1
GeneID:821800 KEGG:ath:AT3G22310 GeneFarm:922 TAIR:At3g22310
InParanoid:Q9LUW6 OMA:VSQGRQV PhylomeDB:Q9LUW6
Genevestigator:Q9LUW6 GermOnline:AT3G22310 Uniprot:Q9LUW6
Length = 610
Score = 416 (151.5 bits), Expect = 1.5e-36, P = 1.5e-36
Identities = 117/341 (34%), Positives = 176/341 (51%)
Query: 383 ECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVL 442
+ GISP +KAL G ++ +Q+A L +EG+D + +A+TGTGK++AF +P I+ ++
Sbjct: 120 DLGISPEIVKALKGRGIEKLFPIQKAVLEPAMEGRDMIGRARTGTGKTLAFGIPIIDKII 179
Query: 443 KATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRR 502
K + P L+L PTRELA Q+ E ++ + + L GGT R
Sbjct: 180 KFNAKHGRGKNPQC--LVLAPTRELARQVEKE---FRESAPSLDTICLYGGTPIGQQMRE 234
Query: 503 LESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCL 562
L + V TPGR++D + K G ++ L ++ +VLDEAD +L +GF +DVE I+ L
Sbjct: 235 LNYG-IDVAVGTPGRIIDLM--KRG-ALNLSEVQFVVLDEADQMLQVGFAEDVEIILQKL 290
Query: 563 PRRRQSLLFSATMP---KELVLK--REHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQI 617
P +RQS++FSATMP + L K ID VG + I + A I
Sbjct: 291 PAKRQSMMFSATMPSWIRSLTKKYLNNPLTIDLVGDSDQKLADGITMYSIAADSYGRASI 350
Query: 618 LHHLLKEHILGTPDYKVIVFCSTGM-VTSLLYLLLREMKMNVREMYSRKPQLYRDRISEE 676
+ L+KEH G K IVF T L + L + K ++ Q R+R
Sbjct: 351 IGPLVKEHGKGG---KCIVFTQTKRDADRLAFGLAKSYKCEA--LHGDISQAQRERTLAG 405
Query: 677 FRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 717
FR ILV +DV+ARG+D P+V V+ +P + E ++H
Sbjct: 406 FRDGNFSILVATDVAARGLDVPNVDLVIHYELPNNTETFVH 446
>CGD|CAL0004058 [details] [associations]
symbol:DBP8 species:5476 "Candida albicans" [GO:0030686 "90S
preribosome" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0000472 "endonucleolytic cleavage to generate mature 5'-end of
SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000447 "endonucleolytic cleavage in ITS1 to separate SSU-rRNA
from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA] [GO:0000480
"endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 CGD:CAL0004058 GO:GO:0005524 GO:GO:0005730
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 EMBL:AACQ01000165 EMBL:AACQ01000186
RefSeq:XP_711718.1 RefSeq:XP_712192.1 ProteinModelPortal:Q59PR3
STRING:Q59PR3 GeneID:3646191 GeneID:3646692 KEGG:cal:CaO19.13973
KEGG:cal:CaO19.6652 KO:K14778 Uniprot:Q59PR3
Length = 440
Score = 399 (145.5 bits), Expect = 2.3e-36, P = 2.3e-36
Identities = 118/349 (33%), Positives = 175/349 (50%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F++ G++ ++L A T +Q A + A L+G D + AKTG+GK+IAF P +
Sbjct: 3 FNDLGVAKWLSESLDAMKIYTPTAIQSACIPAILKGHDCIGGAKTGSGKTIAFAAPML-- 60
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
T S I+ LIL PTRELA QIA + AL N + I V +VGG F
Sbjct: 61 ----TQWSEDPF--GIFGLILTPTRELALQIAEQFAALGANMN-IKVAVVVGGEDFVQQT 113
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVR-LMGLKMLVLDEADHLLDLGFRKDVENIV 559
L+ P ++ATPGRL DHI N ++ L +K LVLDEAD LL F D++
Sbjct: 114 LALQRKP-HFVIATPGRLADHILNSGEETISGLRRVKYLVLDEADRLLSNSFGSDLQRCF 172
Query: 560 DCLPR--RRQSLLFSATMPKELVLKREHTYID---TVGLGSVET------PVKIKQSCLV 608
D LP +RQ+LLF+AT+ + +E V + VET P ++ S +
Sbjct: 173 DVLPTSDKRQTLLFTATITDAVRALKEKPPTPGKPPVFMHEVETVDKVAIPSTLQISYVF 232
Query: 609 APHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQL 668
P + L+ +L H+ D ++F + +L +LR++ V ++S PQ
Sbjct: 233 VPSYVKEAYLNSIL--HLEQFKDSTAVIFVNRTTTAEVLRRMLRKLDFRVASLHSEMPQS 290
Query: 669 YRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 717
R F+A IL+ +DV++RG+D P V V+ IP D + +IH
Sbjct: 291 ERTNSLHRFKAGAARILIATDVASRGLDIPTVELVINFDIPADPDDFIH 339
>UNIPROTKB|Q9Y6V7 [details] [associations]
symbol:DDX49 "Probable ATP-dependent RNA helicase DDX49"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
EMBL:AC002985 KO:K14778 HOGENOM:HOG000268802 OMA:EVRTVEQ
HOVERGEN:HBG100512 EMBL:AK223294 EMBL:BC002674 IPI:IPI00003739
RefSeq:NP_061943.2 UniGene:Hs.143187 ProteinModelPortal:Q9Y6V7
SMR:Q9Y6V7 IntAct:Q9Y6V7 STRING:Q9Y6V7 PhosphoSite:Q9Y6V7
DMDM:74753527 PaxDb:Q9Y6V7 PRIDE:Q9Y6V7 DNASU:54555
Ensembl:ENST00000247003 GeneID:54555 KEGG:hsa:54555 UCSC:uc002nkq.2
CTD:54555 GeneCards:GC19P019030 HGNC:HGNC:18684 neXtProt:NX_Q9Y6V7
PharmGKB:PA134956171 InParanoid:Q9Y6V7 OrthoDB:EOG4C87SC
PhylomeDB:Q9Y6V7 GenomeRNAi:54555 NextBio:57032 ArrayExpress:Q9Y6V7
Bgee:Q9Y6V7 CleanEx:HS_DDX49 Genevestigator:Q9Y6V7
GermOnline:ENSG00000105671 Uniprot:Q9Y6V7
Length = 483
Score = 399 (145.5 bits), Expect = 2.3e-36, P = 2.3e-36
Identities = 114/343 (33%), Positives = 176/343 (51%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F E G+S ++ G Q T VQ + A LEG+D + AKTG+GK+ AF+LP
Sbjct: 4 FAELGLSSWLVEQCRQLGLKQPTPVQLGCIPAILEGRDCLGCAKTGSGKTAAFVLP---- 59
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+L+ S I+ L+L PTRELA QIA E +L G+ +VGG
Sbjct: 60 ILQKLSEDPYG----IFCLVLTPTRELAYQIA-EQFRVLGKPLGLKDCIIVGGMDMVAQA 114
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLG---FRKDVEN 557
L P +++ATPGRL DH+ + + S++ ++ LV+DEAD LL+ G F D+E
Sbjct: 115 LELSRKP-HVVIATPGRLADHLRSSNTFSIKK--IRFLVMDEADRLLEQGCTDFTVDLEA 171
Query: 558 IVDCLPRRRQSLLFSATMP---KELVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELH 614
I+ +P RRQ+LLFSAT+ +EL + V T ++ Q L+ P ++
Sbjct: 172 ILAAVPARRQTLLFSATLTDTLRELQGLATNQPFFWEAQAPVSTVEQLDQRYLLVPEKVK 231
Query: 615 FQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRIS 674
L HL++ D+ +I+F +T +L ++LR+ ++S Q R
Sbjct: 232 DAYLVHLIQRFQDEHEDWSIIIFTNTCKTCQILCMMLRKFSFPTVALHSMMKQKERFAAL 291
Query: 675 EEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 717
+F++S IL+ +DV++RG+D P V V+ P + YIH
Sbjct: 292 AKFKSSIYRILIATDVASRGLDIPTVQVVINHNTPGLPKIYIH 334
>DICTYBASE|DDB_G0269192 [details] [associations]
symbol:tifA "eukaryotic translation initiation factor
4A" species:44689 "Dictyostelium discoideum" [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0006413
"translational initiation" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0003743
"translation initiation factor activity" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 dictyBase:DDB_G0269192 GO:GO:0005524 GO:GO:0005737
EMBL:AAFI02000005 GenomeReviews:CM000150_GR GO:GO:0003743
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
KO:K13025 OMA:LALGDFM RefSeq:XP_646270.1 ProteinModelPortal:Q55D61
SMR:Q55D61 PRIDE:Q55D61 EnsemblProtists:DDB0191511 GeneID:8617226
KEGG:ddi:DDB_G0269192 Uniprot:Q55D61
Length = 405
Score = 378 (138.1 bits), Expect = 2.6e-36, Sum P(2) = 2.6e-36
Identities = 109/341 (31%), Positives = 176/341 (51%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F+ G+ ++ + G+ + + +Q+ + ++G+D + +A++GTGK+ F + A++
Sbjct: 34 FESMGLREELLRGIFNYGFEKPSAIQQRAILPIIKGRDTIAQAQSGTGKTATFSIGALQC 93
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
V S P VLIL PTRELA QI A+AL I V VGG D
Sbjct: 94 VEVNVRS------PQ--VLILSPTRELAQQIQKVALAL-SEFMNIQVHACVGGKNLSDDV 144
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
++LE+ I+ TPGR+LD I KS L R +KM++LDEAD +L LGF++ + ++
Sbjct: 145 KKLETG-VHIVSGTPGRVLDMITRKS-LPTR--HIKMMILDEADEMLSLGFQQQINDVYR 200
Query: 561 CLPRRRQSLLFSATMPKELVLKREHTYIDTVG--LGSVETPVK-IKQSCL-VAPHELHFQ 616
LP Q +L SAT+ +++V E V L E + IKQ + V + F
Sbjct: 201 YLPNGTQIVLVSATLTQDVVSMTEKFMTKPVRILLKRDELTLDGIKQFFVSVEKEDWKFG 260
Query: 617 ILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEE 676
L + + + T + ++FC+T L +R+ V M+ Q R+ I +
Sbjct: 261 TLCDIY-DSLTIT---QAVIFCNTKKKVDQLTEQMRDANFTVASMHGDMVQKEREEIIKS 316
Query: 677 FRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 717
FR+ + +L+T+D+ ARG+D V+ V+ +P DRE YIH
Sbjct: 317 FRSGENRVLITTDILARGIDVQQVSLVINYDLPIDRENYIH 357
Score = 45 (20.9 bits), Expect = 2.6e-36, Sum P(2) = 2.6e-36
Identities = 13/41 (31%), Positives = 19/41 (46%)
Query: 223 SGTDKRNFCRNDGSSTRDKAGFDTGN-KAKPFARNLGNNRE 262
S D+R NDGSS + F + + KP ++G E
Sbjct: 2 SHKDRRGNSSNDGSSFKLNETFTSSEVEVKPTFESMGLREE 42
>TAIR|locus:2160225 [details] [associations]
symbol:AT5G54910 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0005730
"nucleolus" evidence=IDA] [GO:0006606 "protein import into nucleus"
evidence=RCA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0005730 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
EMBL:AB005232 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K14776 InterPro:IPR025313 Pfam:PF13959 HOGENOM:HOG000268801
IPI:IPI00527032 RefSeq:NP_200302.1 UniGene:At.29471
ProteinModelPortal:Q9FFT9 SMR:Q9FFT9 STRING:Q9FFT9 PaxDb:Q9FFT9
PRIDE:Q9FFT9 EnsemblPlants:AT5G54910.1 GeneID:835582
KEGG:ath:AT5G54910 GeneFarm:988 TAIR:At5g54910 InParanoid:Q9FFT9
OMA:PEDGVGC PhylomeDB:Q9FFT9 ProtClustDB:CLSN2686959
Genevestigator:Q9FFT9 GermOnline:AT5G54910 Uniprot:Q9FFT9
Length = 739
Score = 419 (152.6 bits), Expect = 2.6e-36, P = 2.6e-36
Identities = 134/471 (28%), Positives = 223/471 (47%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
++F + IS T + L A Y+ MT VQ A + L G+D + A+TG+GK++AF++P +
Sbjct: 71 RKFAQLPISDKTKRGLKDAKYVDMTDVQSAAIPHALCGRDILGAARTGSGKTLAFVIPIL 130
Query: 439 EAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
E + + S + +I+ PTRELA+Q + K H L L+GG R V
Sbjct: 131 EKLHRERWSPEDG----VGCIIISPTRELAAQTFGVLNKVGKFHKFSAGL-LIGG-REGV 184
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
D + ILV PGRLL H++ L++L+LDEAD +LD F+ ++ I
Sbjct: 185 DVEKERVHEMNILVCAPGRLLQHMDETPNFECPQ--LQILILDEADRVLDSAFKGQLDPI 242
Query: 559 VDCLPRRRQSLLFSATMPKEL-----VLKREHTYIDTVGLGSVETPVKIKQSCLVAPHEL 613
+ LP+ RQ+LLFSAT K++ + R+ YI TP + Q+ ++ P E
Sbjct: 243 ISQLPKHRQTLLFSATQTKKVKDLARLSLRDPEYISVHAEAVTATPTSLMQTVMIVPVEK 302
Query: 614 HFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNV--REMYSRKPQLYRD 671
+L +K H+ + +++VF ST ++ +++ + + ++ + Q R
Sbjct: 303 KLDMLWSFIKTHL----NSRILVFLSTKKQVKFVHEAFNKLRPGIPLKSLHGKMSQEKRM 358
Query: 672 RISEEFRASKRLILVTSDVSARGMDYPDVTS-VVQVGIPPDREQYIHXXXXXXXXXXXXX 730
+ +F ++ +L +DV ARG+D+ VVQV P D YIH
Sbjct: 359 GVYSQF-IERQSVLFCTDVLARGLDFDKAVDWVVQVDCPEDVASYIHRVGRTARFYTQGK 417
Query: 731 XVLLLAPWEEYFXXXXXXXXXXXXXXXXXNPEIQLQMDNHMAKI---DNNVKEAAYHAWL 787
+L L P EE N ++Q ++ +A + +++ A A++
Sbjct: 418 SLLFLTPSEEKMIEKLQEAKVPIKLIKANNQKLQ-EVSRLLAALLVKYPDLQGVAQRAFI 476
Query: 788 GYYNSIREIGRDKTT--LVELA-NKFAQSIGLQRPPPLFRKTALKMGLKDI 835
Y SI + RDK + +L+ F+ S+GL P + R T LK K +
Sbjct: 477 TYLRSIHK-RRDKEIFDVSKLSIENFSASLGLPMTPRI-RFTNLKTKKKGV 525
>UNIPROTKB|Q8EIE5 [details] [associations]
symbol:dbpA "ATP-dependent RNA helicase DbpA"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268809 KO:K05591
OMA:HIDPARF ProtClustDB:PRK11776 InterPro:IPR005580 Pfam:PF03880
HSSP:P10081 RefSeq:NP_716527.1 ProteinModelPortal:Q8EIE5
GeneID:1168744 KEGG:son:SO_0897 PATRIC:23521451 Uniprot:Q8EIE5
Length = 458
Score = 398 (145.2 bits), Expect = 3.0e-36, P = 3.0e-36
Identities = 113/331 (34%), Positives = 173/331 (52%)
Query: 391 IKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTT 450
++ L++ GY +MT +Q +L A L G+D + + KTG+GK+ AF L +L
Sbjct: 13 LENLSSMGYNEMTPIQAQSLPAILAGEDVIGQGKTGSGKTAAFGL----GLLNKLDVKRF 68
Query: 451 QLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQI 510
+ I L+LCPTRELA Q+A E L + + VLTL GG LE I
Sbjct: 69 R----IQTLVLCPTRELADQVAQEIRTLARGIHNVKVLTLCGGVPMGPQIGSLEHG-AHI 123
Query: 511 LVATPGRLLDHIE-NKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQSL 569
+V TPGR++DH++ N+ LS L MLVLDEAD +L++GF+ ++ I++ PR RQ+L
Sbjct: 124 IVGTPGRIVDHLDRNRLDLS----NLNMLVLDEADRMLEMGFQPQLDAIIEQSPRERQTL 179
Query: 570 LFSATMPKELVLKREHTYIDTVGLGSVETPVK--IKQSCL-VAPHELHFQILHHLLKEHI 626
LFSAT P+++ + + V + + T K I+Q + + Q L LL EH
Sbjct: 180 LFSATFPEQIQSIAKQIMYNPVMVKAAVTHEKNTIEQHFYQLDDDKSRMQALQLLLLEH- 238
Query: 627 LGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEFRASKRLILV 686
P+ +VFC+T T + L + +V ++ Q RD +F +LV
Sbjct: 239 --KPE-SAVVFCNTKRETQKVADELEGLGFSVLALHGDLEQRDRDETLLQFANKSACVLV 295
Query: 687 TSDVSARGMDYPDVTSVVQVGIPPDREQYIH 717
+DV+ARG+D + +V + D E +IH
Sbjct: 296 ATDVAARGLDIDALDAVFNYHVAYDTEVHIH 326
>UNIPROTKB|Q8EJQ5 [details] [associations]
symbol:rhlB "ATP-dependent RNA helicase RhlB"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] HAMAP:MF_00661 InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR023554
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003723 EMBL:AE014299
GenomeReviews:AE014299_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268807 KO:K03732 ProtClustDB:PRK04837
RefSeq:NP_716045.1 ProteinModelPortal:Q8EJQ5 GeneID:1168284
KEGG:son:SO_0407 PATRIC:23520517 OMA:PANAERQ Uniprot:Q8EJQ5
Length = 439
Score = 398 (145.2 bits), Expect = 3.0e-36, P = 3.0e-36
Identities = 117/347 (33%), Positives = 182/347 (52%)
Query: 376 LSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLL 435
LS ++F + + P +AL G+ T +Q +L L+ KD +A+TGTGK++AFL+
Sbjct: 6 LSNQKFADLPLHPEVKQALAENGFEFCTPIQALSLPVLLQSKDIAGQAQTGTGKTMAFLV 65
Query: 436 PAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTR 495
+L ++ QL P +I+ PTRELA QIA +AI L K H + V + GG
Sbjct: 66 ATFNHLLSSSIPEGRQLNQP-RAIIMAPTRELAIQIAKDAILLAK-HTRLKVGIVYGGES 123
Query: 496 FKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDV 555
+ V QR++ IL+ T GR++D++ + G+ + L ++ +VLDEAD + DLGF KD+
Sbjct: 124 YDV-QRKVLDQGVDILIGTTGRIIDYV--RQGI-INLNAIQAVVLDEADRMFDLGFIKDI 179
Query: 556 ENIVDCLPR--RRQSLLFSATMPKELV-LKREHTYIDT-VGLGSVE-TPVKIKQSCLVAP 610
+ +P +R ++LFSAT+ ++ L +H V + E T IK+
Sbjct: 180 RFLFRRMPNADQRLNMLFSATLSMKVQELAYDHMNDPVKVEIAPEEKTSKNIKEEIFYPS 239
Query: 611 HELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYR 670
E ++L L++E P+ K IVF +T L+ L V + PQ R
Sbjct: 240 QEDKMRLLLTLIEED---WPE-KAIVFSNTKHSCENLWSWLEGDGHRVGLLTGDVPQKKR 295
Query: 671 DRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 717
RI E+F + ILV +DV+ARG+ DV+ V +P D E Y+H
Sbjct: 296 IRILEQFTQGQLDILVATDVAARGLHISDVSHVYNYDLPDDCEDYVH 342
>TIGR_CMR|GSU_0189 [details] [associations]
symbol:GSU_0189 "ATP-dependent RNA helicase DbpA"
species:243231 "Geobacter sulfurreducens PCA" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] [GO:0042254 "ribosome
biogenesis" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:AE017180 GenomeReviews:AE017180_GR InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268809 KO:K05591 ProtClustDB:PRK11776
InterPro:IPR005580 Pfam:PF03880 RefSeq:NP_951250.1
ProteinModelPortal:Q74GQ7 GeneID:2687824 KEGG:gsu:GSU0189
PATRIC:22023124 OMA:VAIASHC BioCyc:GSUL243231:GH27-128-MONOMER
Uniprot:Q74GQ7
Length = 460
Score = 398 (145.2 bits), Expect = 3.0e-36, P = 3.0e-36
Identities = 109/366 (29%), Positives = 175/366 (47%)
Query: 376 LSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLL 435
++ K F + ++ L + GY +MT +Q +L L GKD + +AKTG+GK+ AF +
Sbjct: 1 MNPKAFSSLRLKAPMLRNLASLGYAEMTPIQAHSLPLILAGKDVIARAKTGSGKTAAFGI 60
Query: 436 PAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTR 495
+ L A S + L+LCPTRELA Q+ E L + D I +LT+ GG
Sbjct: 61 GLLSR-LDALSFR-------VQALVLCPTRELADQVGKELRRLARFTDNIKILTICGGVP 112
Query: 496 FKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDV 555
F LE +++ TPGRLLDH+ + G S+ L L+ LVLDEAD +LD+GF+ D+
Sbjct: 113 FGPQLGSLEHG-AHVVIGTPGRLLDHL--RRG-SLDLSALRTLVLDEADRMLDMGFQDDI 168
Query: 556 ENIVDCLPRRRQSLLFSATMPKELVLKREHTYIDTV--GLGSVETPVKIKQSCLVAPHEL 613
++ P +RQ+LLFSAT P + + V + V I+Q
Sbjct: 169 SALIAAAPPKRQTLLFSATYPDSIAAMSAGVQREPVEVSVDEVHGEGAIEQVFYEVDSGQ 228
Query: 614 HFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRI 673
+ + +L + P+ ++FC+T + + L ++ Q RDR+
Sbjct: 229 RIEAVERILGHY---RPE-SALIFCNTKLECQEVANALAVRGYAALAIHGDLDQRERDRV 284
Query: 674 SEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXXXXXXXVL 733
F +LV +DV+ARG+D ++++V+ + + E + H V
Sbjct: 285 LVRFANRSASVLVATDVAARGLDIKELSAVINYELTRNPEVHTHRIGRTGRAGERGLAVS 344
Query: 734 LLAPWE 739
L+ P E
Sbjct: 345 LVTPRE 350
>TIGR_CMR|SO_0407 [details] [associations]
symbol:SO_0407 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] HAMAP:MF_00661 InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR023554
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003723 EMBL:AE014299
GenomeReviews:AE014299_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268807 KO:K03732 ProtClustDB:PRK04837
RefSeq:NP_716045.1 ProteinModelPortal:Q8EJQ5 GeneID:1168284
KEGG:son:SO_0407 PATRIC:23520517 OMA:PANAERQ Uniprot:Q8EJQ5
Length = 439
Score = 398 (145.2 bits), Expect = 3.0e-36, P = 3.0e-36
Identities = 117/347 (33%), Positives = 182/347 (52%)
Query: 376 LSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLL 435
LS ++F + + P +AL G+ T +Q +L L+ KD +A+TGTGK++AFL+
Sbjct: 6 LSNQKFADLPLHPEVKQALAENGFEFCTPIQALSLPVLLQSKDIAGQAQTGTGKTMAFLV 65
Query: 436 PAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTR 495
+L ++ QL P +I+ PTRELA QIA +AI L K H + V + GG
Sbjct: 66 ATFNHLLSSSIPEGRQLNQP-RAIIMAPTRELAIQIAKDAILLAK-HTRLKVGIVYGGES 123
Query: 496 FKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDV 555
+ V QR++ IL+ T GR++D++ + G+ + L ++ +VLDEAD + DLGF KD+
Sbjct: 124 YDV-QRKVLDQGVDILIGTTGRIIDYV--RQGI-INLNAIQAVVLDEADRMFDLGFIKDI 179
Query: 556 ENIVDCLPR--RRQSLLFSATMPKELV-LKREHTYIDT-VGLGSVE-TPVKIKQSCLVAP 610
+ +P +R ++LFSAT+ ++ L +H V + E T IK+
Sbjct: 180 RFLFRRMPNADQRLNMLFSATLSMKVQELAYDHMNDPVKVEIAPEEKTSKNIKEEIFYPS 239
Query: 611 HELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYR 670
E ++L L++E P+ K IVF +T L+ L V + PQ R
Sbjct: 240 QEDKMRLLLTLIEED---WPE-KAIVFSNTKHSCENLWSWLEGDGHRVGLLTGDVPQKKR 295
Query: 671 DRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 717
RI E+F + ILV +DV+ARG+ DV+ V +P D E Y+H
Sbjct: 296 IRILEQFTQGQLDILVATDVAARGLHISDVSHVYNYDLPDDCEDYVH 342
>TIGR_CMR|SO_0897 [details] [associations]
symbol:SO_0897 "ATP-dependent RNA helicase DbpA"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268809 KO:K05591
OMA:HIDPARF ProtClustDB:PRK11776 InterPro:IPR005580 Pfam:PF03880
HSSP:P10081 RefSeq:NP_716527.1 ProteinModelPortal:Q8EIE5
GeneID:1168744 KEGG:son:SO_0897 PATRIC:23521451 Uniprot:Q8EIE5
Length = 458
Score = 398 (145.2 bits), Expect = 3.0e-36, P = 3.0e-36
Identities = 113/331 (34%), Positives = 173/331 (52%)
Query: 391 IKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTT 450
++ L++ GY +MT +Q +L A L G+D + + KTG+GK+ AF L +L
Sbjct: 13 LENLSSMGYNEMTPIQAQSLPAILAGEDVIGQGKTGSGKTAAFGL----GLLNKLDVKRF 68
Query: 451 QLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQI 510
+ I L+LCPTRELA Q+A E L + + VLTL GG LE I
Sbjct: 69 R----IQTLVLCPTRELADQVAQEIRTLARGIHNVKVLTLCGGVPMGPQIGSLEHG-AHI 123
Query: 511 LVATPGRLLDHIE-NKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQSL 569
+V TPGR++DH++ N+ LS L MLVLDEAD +L++GF+ ++ I++ PR RQ+L
Sbjct: 124 IVGTPGRIVDHLDRNRLDLS----NLNMLVLDEADRMLEMGFQPQLDAIIEQSPRERQTL 179
Query: 570 LFSATMPKELVLKREHTYIDTVGLGSVETPVK--IKQSCL-VAPHELHFQILHHLLKEHI 626
LFSAT P+++ + + V + + T K I+Q + + Q L LL EH
Sbjct: 180 LFSATFPEQIQSIAKQIMYNPVMVKAAVTHEKNTIEQHFYQLDDDKSRMQALQLLLLEH- 238
Query: 627 LGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEFRASKRLILV 686
P+ +VFC+T T + L + +V ++ Q RD +F +LV
Sbjct: 239 --KPE-SAVVFCNTKRETQKVADELEGLGFSVLALHGDLEQRDRDETLLQFANKSACVLV 295
Query: 687 TSDVSARGMDYPDVTSVVQVGIPPDREQYIH 717
+DV+ARG+D + +V + D E +IH
Sbjct: 296 ATDVAARGLDIDALDAVFNYHVAYDTEVHIH 326
>CGD|CAL0004095 [details] [associations]
symbol:TIF species:5476 "Candida albicans" [GO:0003743
"translation initiation factor activity" evidence=ISS] [GO:0006413
"translational initiation" evidence=ISS] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016281 "eukaryotic translation initiation factor 4F complex"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 CGD:CAL0004095 GO:GO:0005524
GO:GO:0005737 GO:GO:0003743 EMBL:AACQ01000045 EMBL:AACQ01000042
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K03257
EMBL:D84472 RefSeq:XP_718147.1 RefSeq:XP_718416.1
ProteinModelPortal:P87206 STRING:P87206 PRIDE:P87206 GeneID:3639917
GeneID:3640190 KEGG:cal:CaO19.10834 KEGG:cal:CaO19.3324
Uniprot:P87206
Length = 397
Score = 396 (144.5 bits), Expect = 4.9e-36, P = 4.9e-36
Identities = 110/343 (32%), Positives = 180/343 (52%)
Query: 380 RFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIE 439
+FD+ + P ++ + GY + +Q+ + EG+D + +A++GTGK+ F + A++
Sbjct: 24 KFDDLNLKPNIVRGIFGYGYETPSAIQQRAILPITEGRDVLAQAQSGTGKTATFTISALQ 83
Query: 440 AVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVD 499
+ + + TQ LIL PTRELA QI I + + + V +GGT D
Sbjct: 84 RINE--NEKATQ------ALILAPTRELALQIK-NVITAIGLYLKVTVHASIGGTSMSDD 134
Query: 500 QRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIV 559
S QI+V TPGR+LD IE + + ++ KM +LDEAD +L GF++ + NI
Sbjct: 135 IEAFRSG-VQIVVGTPGRVLDMIERRYFKTDKV---KMFILDEADEMLSSGFKEQIYNIF 190
Query: 560 DCLPRRRQSLLFSATMPKELVLKREHTYIDT---VGLGSVETPVK-IKQSCL-VAPHELH 614
LP Q +L SATMP++ VL+ +++ + + E ++ IKQ + V +
Sbjct: 191 RLLPETTQIVLLSATMPQD-VLEVTTKFMNNPVRILVKKDELTLEGIKQFYINVELEDYK 249
Query: 615 FQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRIS 674
F L L + I T + ++FC+T L LRE V +++ PQ RD I
Sbjct: 250 FDCLCDLY-DSISVT---QAVIFCNTRSKVEFLTNKLREQHFTVSAIHADLPQAERDTIM 305
Query: 675 EEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 717
+EFR+ IL+++D+ ARG+D V+ V+ +P ++E YIH
Sbjct: 306 KEFRSGSSRILISTDLLARGIDVQQVSLVINYDLPANKENYIH 348
>UNIPROTKB|P87206 [details] [associations]
symbol:TIF1 "ATP-dependent RNA helicase eIF4A"
species:237561 "Candida albicans SC5314" [GO:0003743 "translation
initiation factor activity" evidence=ISS] [GO:0006413
"translational initiation" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 CGD:CAL0004095
GO:GO:0005524 GO:GO:0005737 GO:GO:0003743 EMBL:AACQ01000045
EMBL:AACQ01000042 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K03257 EMBL:D84472 RefSeq:XP_718147.1 RefSeq:XP_718416.1
ProteinModelPortal:P87206 STRING:P87206 PRIDE:P87206 GeneID:3639917
GeneID:3640190 KEGG:cal:CaO19.10834 KEGG:cal:CaO19.3324
Uniprot:P87206
Length = 397
Score = 396 (144.5 bits), Expect = 4.9e-36, P = 4.9e-36
Identities = 110/343 (32%), Positives = 180/343 (52%)
Query: 380 RFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIE 439
+FD+ + P ++ + GY + +Q+ + EG+D + +A++GTGK+ F + A++
Sbjct: 24 KFDDLNLKPNIVRGIFGYGYETPSAIQQRAILPITEGRDVLAQAQSGTGKTATFTISALQ 83
Query: 440 AVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVD 499
+ + + TQ LIL PTRELA QI I + + + V +GGT D
Sbjct: 84 RINE--NEKATQ------ALILAPTRELALQIK-NVITAIGLYLKVTVHASIGGTSMSDD 134
Query: 500 QRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIV 559
S QI+V TPGR+LD IE + + ++ KM +LDEAD +L GF++ + NI
Sbjct: 135 IEAFRSG-VQIVVGTPGRVLDMIERRYFKTDKV---KMFILDEADEMLSSGFKEQIYNIF 190
Query: 560 DCLPRRRQSLLFSATMPKELVLKREHTYIDT---VGLGSVETPVK-IKQSCL-VAPHELH 614
LP Q +L SATMP++ VL+ +++ + + E ++ IKQ + V +
Sbjct: 191 RLLPETTQIVLLSATMPQD-VLEVTTKFMNNPVRILVKKDELTLEGIKQFYINVELEDYK 249
Query: 615 FQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRIS 674
F L L + I T + ++FC+T L LRE V +++ PQ RD I
Sbjct: 250 FDCLCDLY-DSISVT---QAVIFCNTRSKVEFLTNKLREQHFTVSAIHADLPQAERDTIM 305
Query: 675 EEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 717
+EFR+ IL+++D+ ARG+D V+ V+ +P ++E YIH
Sbjct: 306 KEFRSGSSRILISTDLLARGIDVQQVSLVINYDLPANKENYIH 348
>TIGR_CMR|CPS_0174 [details] [associations]
symbol:CPS_0174 "ATP-dependent RNA helicase RhlB"
species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0006402
"mRNA catabolic process" evidence=ISS] HAMAP:MF_00661
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR023554 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003723
GO:GO:0006401 EMBL:CP000083 GenomeReviews:CP000083_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 KO:K03732 OMA:HIDGIKY ProtClustDB:PRK04837
RefSeq:YP_266942.1 ProteinModelPortal:Q48AH1 STRING:Q48AH1
GeneID:3521970 KEGG:cps:CPS_0174 PATRIC:21463765
BioCyc:CPSY167879:GI48-277-MONOMER Uniprot:Q48AH1
Length = 428
Score = 396 (144.5 bits), Expect = 4.9e-36, P = 4.9e-36
Identities = 114/347 (32%), Positives = 179/347 (51%)
Query: 376 LSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLL 435
L++ +F + ++P + L A G+ T +Q +L L+G D +A+TG GK+IAFL
Sbjct: 6 LTETKFADLNLAPQVVTGLEAMGFDYCTSIQAKSLPVLLQGTDLAGQAQTGEGKTIAFLA 65
Query: 436 PAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTR 495
+L+ + + Q P LI+ PTRELA QI +A + K+ G+ + + GG
Sbjct: 66 ATFHHLLQKEAPTHNQ--PR--ALIMAPTRELAIQIHRDATEMAKS-TGLRLGVVYGGEG 120
Query: 496 FKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDV 555
++ + LE+ IL+ T GRL+D++ K G+ L ++++VLDEAD + DLGF KD+
Sbjct: 121 YESQRLELEAG-VDILIGTCGRLIDYM--KQGI-YNLKNIEVIVLDEADRMFDLGFIKDI 176
Query: 556 ENIVDCLP--RRRQSLLFSATMP---KELVLKREHTYIDTVGLGSVETPVKIKQSCLVAP 610
+ D +P R S+LFSAT+ KEL + +T +I +
Sbjct: 177 RYMFDKMPPATERLSMLFSATLSFRVKELAFDHMNDPTSVEVEPEQKTNSRISEELFYPS 236
Query: 611 HELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYR 670
+E +L L++E P+ K IVF +T V ++ L K+ V + PQ R
Sbjct: 237 NEDKMTLLQTLIEED---WPE-KAIVFANTKHVCEKVFDHLNADKIRVGLLTGDVPQKKR 292
Query: 671 DRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 717
+I EEF ILV +DV+ARG+ P VT V +P D + Y+H
Sbjct: 293 LKILEEFTDGTVDILVATDVAARGLHIPSVTHVFNYDLPDDCQDYVH 339
>MGI|MGI:2136689 [details] [associations]
symbol:Ddx49 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 49"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 MGI:MGI:2136689 GO:GO:0005524
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K14778 HOGENOM:HOG000268802 OMA:EVRTVEQ
GeneTree:ENSGT00670000098028 HOVERGEN:HBG100512 CTD:54555
OrthoDB:EOG4C87SC EMBL:BC099554 IPI:IPI00354271
RefSeq:NP_001020093.2 UniGene:Mm.388127 UniGene:Mm.440659
ProteinModelPortal:Q4FZF3 SMR:Q4FZF3 PhosphoSite:Q4FZF3
PRIDE:Q4FZF3 Ensembl:ENSMUST00000008004 GeneID:234374
KEGG:mmu:234374 UCSC:uc009lzu.1 InParanoid:Q4FZF3 NextBio:382139
Bgee:Q4FZF3 CleanEx:MM_DDX49 Genevestigator:Q4FZF3
GermOnline:ENSMUSG00000057788 Uniprot:Q4FZF3
Length = 480
Score = 396 (144.5 bits), Expect = 4.9e-36, P = 4.9e-36
Identities = 114/343 (33%), Positives = 176/343 (51%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F E G+S ++ G Q T VQ + A LEG+D + AKTG+GK+ AF+LP
Sbjct: 4 FAEIGLSSWLVEQCRQLGLKQPTPVQLGCIPAILEGRDCLGCAKTGSGKTAAFVLP---- 59
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+L+ S I+ L+L PTRELA QIA E +L G+ +VGG
Sbjct: 60 ILQKLSEDPYG----IFCLVLTPTRELAYQIA-EQFRVLGKPLGLKDCIIVGGMDMVAQA 114
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLG---FRKDVEN 557
L P +++ATPGRL DH+ + + +++ ++ LV+DEAD LL+ G F D+E
Sbjct: 115 LELSRKP-HVVIATPGRLADHLRSSNTFNMKK--IQFLVMDEADRLLEQGCTDFTTDLET 171
Query: 558 IVDCLPRRRQSLLFSATMP---KELVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELH 614
I+ +P RRQ+LLFSAT+ KEL + +V T ++ Q L+ P ++
Sbjct: 172 ILAAVPARRQTLLFSATLTDTLKELQGLATNEPFFWEAQATVRTVEQLDQRYLLVPEKVK 231
Query: 615 FQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRIS 674
L HL++ D +I+F +T +L ++LR+ ++S Q R
Sbjct: 232 DAYLVHLVQTFQDQLEDCSIIIFTNTCKTCQILCMMLRKFNFPTVALHSMMKQKERFAAL 291
Query: 675 EEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 717
+F++S IL+ +DV++RG+D P V V+ P + YIH
Sbjct: 292 AKFKSSIYRILIATDVASRGLDIPTVQVVINHNTPGLPKIYIH 334
>SGD|S000001767 [details] [associations]
symbol:TIF1 "Translation initiation factor eIF4A"
species:4932 "Saccharomyces cerevisiae" [GO:0003743 "translation
initiation factor activity" evidence=IEA;IMP;IDA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0006413 "translational
initiation" evidence=IEA;IMP;IDA] [GO:0006412 "translation"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IMP;IDA] [GO:0005840 "ribosome" evidence=TAS] [GO:0016281
"eukaryotic translation initiation factor 4F complex"
evidence=IGI;ISS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 SGD:S000001767
SGD:S000003674 GO:GO:0005524 GO:GO:0005737 EMBL:BK006943
EMBL:BK006944 GO:GO:0003743 EMBL:X87371 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 KO:K03854
eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00530000062880 EMBL:U25436 KO:K03257
OMA:IKMFILD OrthoDB:EOG4PG98F EMBL:X12813 EMBL:X12814 EMBL:X58099
EMBL:Z49413 EMBL:Z28284 PIR:S05835 RefSeq:NP_012397.1
RefSeq:NP_012985.3 RefSeq:NP_012987.3 PDB:1FUK PDB:1FUU PDB:1QDE
PDB:1QVA PDB:2VSO PDB:2VSX PDBsum:1FUK PDBsum:1FUU PDBsum:1QDE
PDBsum:1QVA PDBsum:2VSO PDBsum:2VSX ProteinModelPortal:P10081
SMR:P10081 DIP:DIP-4571N IntAct:P10081 MINT:MINT-546056
STRING:P10081 SWISS-2DPAGE:P10081 PaxDb:P10081 EnsemblFungi:YJL138C
EnsemblFungi:YKR059W GeneID:853303 GeneID:853933 GeneID:853935
KEGG:sce:YJL138C KEGG:sce:YKR059W KEGG:sce:YKR061W SABIO-RK:P10081
EvolutionaryTrace:P10081 NextBio:973627 Genevestigator:P10081
GermOnline:YJL138C GermOnline:YKR059W Uniprot:P10081
Length = 395
Score = 395 (144.1 bits), Expect = 6.3e-36, P = 6.3e-36
Identities = 112/342 (32%), Positives = 174/342 (50%)
Query: 380 RFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIE 439
+FD+ + ++ + G+ + + +Q+ + +EG D + +A++GTGK+ F + A++
Sbjct: 23 KFDDMELDENLLRGVFGYGFEEPSAIQQRAIMPIIEGHDVLAQAQSGTGKTGTFSIAALQ 82
Query: 440 AVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVD 499
+ TS Q L+L PTRELA QI +AL + D I V +GGT F D
Sbjct: 83 RI--DTSVKAPQ------ALMLAPTRELALQIQKVVMALAFHMD-IKVHACIGGTSFVED 133
Query: 500 QRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIV 559
L QI+V TPGR+ D+I+ + R +KM +LDEAD +L GF++ + I
Sbjct: 134 AEGLRD--AQIVVGTPGRVFDNIQRRR---FRTDKIKMFILDEADEMLSSGFKEQIYQIF 188
Query: 560 DCLPRRRQSLLFSATMPK---ELVLKREHTYIDTVGLGSVETPVKIKQSCL-VAPHELHF 615
LP Q +L SATMP E+ K + + T IKQ + V E +
Sbjct: 189 TLLPPTTQVVLLSATMPNDVLEVTTKFMRNPVRILVKKDELTLEGIKQFYVNVEEEEYKY 248
Query: 616 QILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISE 675
+ L L + I T + ++FC+T L LR K V +YS PQ RD I +
Sbjct: 249 ECLTDLY-DSISVT---QAVIFCNTRRKVEELTTKLRNDKFTVSAIYSDLPQQERDTIMK 304
Query: 676 EFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 717
EFR+ IL+++D+ ARG+D V+ V+ +P ++E YIH
Sbjct: 305 EFRSGSSRILISTDLLARGIDVQQVSLVINYDLPANKENYIH 346
>SGD|S000003674 [details] [associations]
symbol:TIF2 "Translation initiation factor eIF4A"
species:4932 "Saccharomyces cerevisiae" [GO:0003743 "translation
initiation factor activity" evidence=IEA;ISS;IDA;TAS] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IEA;ISS;IDA] [GO:0006446 "regulation of translational
initiation" evidence=ISS] [GO:0005840 "ribosome" evidence=TAS]
[GO:0016281 "eukaryotic translation initiation factor 4F complex"
evidence=IGI;ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IMP] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0006413 "translational initiation"
evidence=IEA;TAS] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 SGD:S000001767 SGD:S000003674 GO:GO:0005524
GO:GO:0005737 EMBL:BK006943 EMBL:BK006944 GO:GO:0003743 EMBL:X87371
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
KO:K03854 eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00530000062880 EMBL:U25436 KO:K03257
OMA:IKMFILD OrthoDB:EOG4PG98F EMBL:X12813 EMBL:X12814 EMBL:X58099
EMBL:Z49413 EMBL:Z28284 PIR:S05835 RefSeq:NP_012397.1
RefSeq:NP_012985.3 RefSeq:NP_012987.3 PDB:1FUK PDB:1FUU PDB:1QDE
PDB:1QVA PDB:2VSO PDB:2VSX PDBsum:1FUK PDBsum:1FUU PDBsum:1QDE
PDBsum:1QVA PDBsum:2VSO PDBsum:2VSX ProteinModelPortal:P10081
SMR:P10081 DIP:DIP-4571N IntAct:P10081 MINT:MINT-546056
STRING:P10081 SWISS-2DPAGE:P10081 PaxDb:P10081 EnsemblFungi:YJL138C
EnsemblFungi:YKR059W GeneID:853303 GeneID:853933 GeneID:853935
KEGG:sce:YJL138C KEGG:sce:YKR059W KEGG:sce:YKR061W SABIO-RK:P10081
EvolutionaryTrace:P10081 NextBio:973627 Genevestigator:P10081
GermOnline:YJL138C GermOnline:YKR059W Uniprot:P10081
Length = 395
Score = 395 (144.1 bits), Expect = 6.3e-36, P = 6.3e-36
Identities = 112/342 (32%), Positives = 174/342 (50%)
Query: 380 RFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIE 439
+FD+ + ++ + G+ + + +Q+ + +EG D + +A++GTGK+ F + A++
Sbjct: 23 KFDDMELDENLLRGVFGYGFEEPSAIQQRAIMPIIEGHDVLAQAQSGTGKTGTFSIAALQ 82
Query: 440 AVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVD 499
+ TS Q L+L PTRELA QI +AL + D I V +GGT F D
Sbjct: 83 RI--DTSVKAPQ------ALMLAPTRELALQIQKVVMALAFHMD-IKVHACIGGTSFVED 133
Query: 500 QRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIV 559
L QI+V TPGR+ D+I+ + R +KM +LDEAD +L GF++ + I
Sbjct: 134 AEGLRD--AQIVVGTPGRVFDNIQRRR---FRTDKIKMFILDEADEMLSSGFKEQIYQIF 188
Query: 560 DCLPRRRQSLLFSATMPK---ELVLKREHTYIDTVGLGSVETPVKIKQSCL-VAPHELHF 615
LP Q +L SATMP E+ K + + T IKQ + V E +
Sbjct: 189 TLLPPTTQVVLLSATMPNDVLEVTTKFMRNPVRILVKKDELTLEGIKQFYVNVEEEEYKY 248
Query: 616 QILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISE 675
+ L L + I T + ++FC+T L LR K V +YS PQ RD I +
Sbjct: 249 ECLTDLY-DSISVT---QAVIFCNTRRKVEELTTKLRNDKFTVSAIYSDLPQQERDTIMK 304
Query: 676 EFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 717
EFR+ IL+++D+ ARG+D V+ V+ +P ++E YIH
Sbjct: 305 EFRSGSSRILISTDLLARGIDVQQVSLVINYDLPANKENYIH 346
>UNIPROTKB|Q11039 [details] [associations]
symbol:deaD "Cold-shock DEAD box protein A homolog"
species:1773 "Mycobacterium tuberculosis" [GO:0005618 "cell wall"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005829 GO:GO:0005524 GO:GO:0005618
GO:GO:0006355 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR EMBL:BX842576 GO:GO:0006351 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268810 KO:K05592 InterPro:IPR005580 Pfam:PF03880
PIR:E70752 RefSeq:NP_215769.1 RefSeq:NP_335736.1
RefSeq:YP_006514628.1 ProteinModelPortal:Q11039 SMR:Q11039
PRIDE:Q11039 EnsemblBacteria:EBMYCT00000002426
EnsemblBacteria:EBMYCT00000070115 GeneID:13319832 GeneID:887069
GeneID:924778 KEGG:mtc:MT1292 KEGG:mtu:Rv1253 KEGG:mtv:RVBD_1253
PATRIC:18124606 TubercuList:Rv1253 OMA:LPQGMPK
ProtClustDB:CLSK791051 Uniprot:Q11039
Length = 563
Score = 405 (147.6 bits), Expect = 7.2e-36, P = 7.2e-36
Identities = 118/370 (31%), Positives = 173/370 (46%)
Query: 374 PILSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAF 433
P S F + I P ++A+ GY T +Q AT+ A + G D V A+TGTGK+ AF
Sbjct: 8 PAASAATFADLQIHPRVLRAIGDVGYESPTAIQAATIPALMAGSDVVGLAQTGTGKTAAF 67
Query: 434 LLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNH-DGIGVLTLVG 492
+P + + T VP L+L PTRELA Q+A EA + + VL + G
Sbjct: 68 AIPMLSKI------DITSKVPQ--ALVLVPTRELALQVA-EAFGRYGAYLSQLNVLPIYG 118
Query: 493 GTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFR 552
G+ + V L Q++V TPGR++DH+E + + L + LVLDEAD +L +GF
Sbjct: 119 GSSYAVQLAGLRRG-AQVVVGTPGRMIDHLERAT---LDLSRVDFLVLDEADEMLTMGFA 174
Query: 553 KDVENIVDCLPRRRQSLLFSATMP---KELVLKREHTYIDTVGLGSVETPVKIKQSCLVA 609
DVE I+ P +Q LFSATMP ++L K H + I QS +
Sbjct: 175 DDVERILSETPEYKQVALFSATMPPAIRKLSAKYLHDPFEVTCKAKTAVAENISQSYIQV 234
Query: 610 PHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLY 669
++ L +L+ P +IVF T T + LR + + PQ
Sbjct: 235 ARKM--DALTRVLEVE----PFEAMIVFVRTKQATEEIAEKLRARGFSAAAISGDVPQAQ 288
Query: 670 RDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXXXXX 729
R+R R ILV +DV+ARG+D ++ V+ IP D E Y+H
Sbjct: 289 RERTITALRDGDIDILVATDVAARGLDVERISHVLNYDIPHDTESYVHRIGRTGRAGRSG 348
Query: 730 XXVLLLAPWE 739
++ ++P E
Sbjct: 349 AALIFVSPRE 358
>TIGR_CMR|DET_0183 [details] [associations]
symbol:DET_0183 "ATP-dependent RNA helicase, DEAD/DEAH box
family" species:243164 "Dehalococcoides ethenogenes 195"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0008152 "metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000027 GenomeReviews:CP000027_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 RefSeq:YP_180931.1 ProteinModelPortal:Q3ZA18
STRING:Q3ZA18 GeneID:3230538 KEGG:det:DET0183 PATRIC:21607443
OMA:NFAPAVM ProtClustDB:CLSK837629
BioCyc:DETH243164:GJNF-183-MONOMER Uniprot:Q3ZA18
Length = 560
Score = 404 (147.3 bits), Expect = 7.9e-36, P = 7.9e-36
Identities = 115/341 (33%), Positives = 175/341 (51%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F+ +P + + A GY + T +Q + LEG D + A+TGTGK+ A+ LP I+
Sbjct: 3 FESFNFAPAVMAGVRACGYQEPTPIQAQAIPPILEGHDVIGLAQTGTGKTAAYALPVIQK 62
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+L ST + + L+L PTRELA QIA E+ L I ++ GG
Sbjct: 63 ML-----STPR--GRVRTLVLAPTRELACQIA-ESFRSLGQRARIRECSIYGGVNMDQQI 114
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
RRL S ++VA PGRLLDHI G ++ + G++ L++DEAD + D+GF+ D+++I+
Sbjct: 115 RRLRSG-VDVVVACPGRLLDHIWR--G-TIDICGVETLIIDEADRMFDMGFQPDIQSILK 170
Query: 561 CLPRRRQSLLFSATMPKE---LVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQI 617
CL + Q+LLFSATMP E L L+ + + T+ +G+ + S V P + H +
Sbjct: 171 CLVQPHQTLLFSATMPPEVRKLTLETQTNPV-TIQIGTQAPASSVSHS--VYPVKNHQKT 227
Query: 618 LHHLLKEHILGTPDYK-VIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEE 676
LL E IL T + K V++F T L + + Q R + E
Sbjct: 228 --PLLIE-ILKTTETKSVLIFARTKYGAENLADEISRAGFTTASLQGNLSQNRRHAVMEG 284
Query: 677 FRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 717
FR ILV +D++ARG+D ++ V+ +P E Y H
Sbjct: 285 FRRGNFKILVATDIAARGLDIDHISHVINYDMPDTPEDYTH 325
>RGD|1311124 [details] [associations]
symbol:Ddx49 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 49"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 RGD:1311124 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 OMA:EVRTVEQ
GeneTree:ENSGT00670000098028 IPI:IPI00362462 PRIDE:E9PTF0
Ensembl:ENSRNOT00000004891 UCSC:RGD:1311124 Uniprot:E9PTF0
Length = 480
Score = 394 (143.8 bits), Expect = 8.1e-36, P = 8.1e-36
Identities = 114/343 (33%), Positives = 174/343 (50%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F E +S ++ G Q T VQ + A LEG+D + AKTG+GK+ AF+LP
Sbjct: 4 FAELRLSSWLVEQCRQLGLKQPTPVQLGCIPAILEGRDCLGCAKTGSGKTAAFVLP---- 59
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+L+ S I+ L+L PTRELA QIA E +L G+ +VGG
Sbjct: 60 ILQKLSEDPYG----IFCLVLTPTRELAYQIA-EQFRVLGKPLGLKDCIIVGGMDMVTQA 114
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLG---FRKDVEN 557
L P +++ATPGRL DH+ + + +++ ++ LVLDEAD LL+ G F D+E
Sbjct: 115 LELSRKP-HVVIATPGRLADHLRSSNTFNMKK--IRFLVLDEADRLLEQGCTDFTADLET 171
Query: 558 IVDCLPRRRQSLLFSATMP---KELVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELH 614
I+ +P RRQ+LLFSAT+ KEL + +V T ++ Q L+ P ++
Sbjct: 172 ILSAVPARRQTLLFSATLTDTLKELQGLATNQPFFWEAQATVRTVEQLDQRYLLVPEKVK 231
Query: 615 FQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRIS 674
L HL++ D +I+F +T +L ++LR+ ++S Q R
Sbjct: 232 DAYLVHLVQTFQDQLEDCSIIIFTNTCKTCQILCMMLRKFNFPTVALHSMMKQKERFAAL 291
Query: 675 EEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 717
F++S IL+ +DV++RG+D P V V+ P + YIH
Sbjct: 292 ARFKSSTYRILIATDVASRGLDIPTVQVVINHNTPGLPKIYIH 334
>UNIPROTKB|F8WAJ0 [details] [associations]
symbol:DDX31 "Probable ATP-dependent RNA helicase DDX31"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:AL354735 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
InterPro:IPR025313 Pfam:PF13959 EMBL:AL160165 HGNC:HGNC:16715
IPI:IPI01010837 ProteinModelPortal:F8WAJ0 SMR:F8WAJ0
Ensembl:ENST00000438527 ArrayExpress:F8WAJ0 Bgee:F8WAJ0
Uniprot:F8WAJ0
Length = 722
Score = 326 (119.8 bits), Expect = 8.6e-36, Sum P(4) = 8.6e-36
Identities = 82/227 (36%), Positives = 130/227 (57%)
Query: 375 ILSQKRFDECGISPLTIKAL-TAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAF 433
+ + F E G+ P I + T MT VQ+ ++ LEG+DA+V+++TG+GK++A+
Sbjct: 97 VFTSAAFHELGLHPHLISTINTVLKMSSMTSVQKQSIPVLLEGRDALVRSQTGSGKTLAY 156
Query: 434 LLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGG 493
+P +++ L+A S + P Y L+L PTRELA Q LLK I L+GG
Sbjct: 157 CIPVVQS-LQAMESKIQRSDGP-YALVLVPTRELALQSFDTVQKLLKPFTWIVPGVLMGG 214
Query: 494 TRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRK 553
+ K ++ RL IL++TPGRL+DHI KS ++ L+ LV DEAD +LDLGF K
Sbjct: 215 EKRKSEKARLRKG-INILISTPGRLVDHI--KSTKNIHFSRLRWLVFDEADRILDLGFEK 271
Query: 554 DVE---NIVDCLPRRRQSLLFSATMPKELVLKREHTYIDTVGLGSVE 597
D+ N V+ ++RQ++L SAT+ + + + + D V + ++
Sbjct: 272 DITVILNAVNAECQKRQNVLLSATLTEGVTRLADISLHDPVSISVLD 318
Score = 131 (51.2 bits), Expect = 8.6e-36, Sum P(4) = 8.6e-36
Identities = 30/89 (33%), Positives = 46/89 (51%)
Query: 654 MKMNVREMYSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDRE 713
M++ ++ Q R + +EF S+R +L+ +DV+ARG+D P VT +VQ P
Sbjct: 422 MRLKFLRLHGGMEQEERTAVFQEFSHSRRGVLLCTDVAARGLDLPQVTWIVQYNAPSSPA 481
Query: 714 QYIHXXXXXXXXXXXXXXVLLLAPWE-EY 741
+YIH +L+LAP E EY
Sbjct: 482 EYIHRIGRTARIGCHGSSLLILAPSEAEY 510
Score = 52 (23.4 bits), Expect = 8.6e-36, Sum P(4) = 8.6e-36
Identities = 16/58 (27%), Positives = 24/58 (41%)
Query: 593 LGSVETPVKIKQSCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLL 650
L S P +KQ V P +L L + + D K++VF S+ + Y L
Sbjct: 343 LDSFAIPESLKQHVTVVPSKLRLVCLAAFILQKCKFEEDQKMVVFFSSCELVEFHYSL 400
Score = 38 (18.4 bits), Expect = 8.6e-36, Sum P(4) = 8.6e-36
Identities = 8/22 (36%), Positives = 12/22 (54%)
Query: 89 NQHKPMSPDEHVKALADRFMKE 110
N K SP +H + +DR +E
Sbjct: 45 NAQKMFSPKKHSVSTSDRNQEE 66
>UNIPROTKB|E2R316 [details] [associations]
symbol:DDX55 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313
Pfam:PF13959 Ensembl:ENSCAFT00000035837 Uniprot:E2R316
Length = 483
Score = 393 (143.4 bits), Expect = 1.0e-35, P = 1.0e-35
Identities = 116/371 (31%), Positives = 180/371 (48%)
Query: 386 ISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKAT 445
+ P + AL G+ MT VQ AT+ ++ KD +A TG+GK++AF++P +E +L+
Sbjct: 16 LHPQVLGALGQLGFPHMTPVQSATIPLFMKNKDVAAEAVTGSGKTLAFVIPILEILLRRE 75
Query: 446 SSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLES 505
V I I+ PTRELA Q+ K+ + +GG D R +
Sbjct: 76 EKLKKNQVGAI---IITPTRELAIQVDEVLAHFTKSFPQFSQILWIGGRNPADDVSRFKE 132
Query: 506 DPCQILVATPGRLLDHIENK-SGLSVR--LMGLKMLVLDEADHLLDLGFRKDVENIVDCL 562
I+VATPGRL D K GL + + L++LVLDEAD LLD+GF + I++ L
Sbjct: 133 QGGNIIVATPGRLEDMFRRKVEGLDLASCVKSLEVLVLDEADRLLDMGFEASINTILEFL 192
Query: 563 PRRRQSLLFSATMPKEL--VLK---REHTYIDT----VGLGSVE-TPVKIKQSCLVAPHE 612
P++R++ LFSAT +E+ +++ R I V S + TP +++ +V +
Sbjct: 193 PKQRRTGLFSATQTQEVESLVRAGLRNPVRISVKEKGVAASSTQKTPSRLENYYMVCKAD 252
Query: 613 LHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSR-KPQLYRD 671
F L H L+ H K ++F ST L + +V+ M K + R+
Sbjct: 253 EKFNQLVHFLRNH----KQEKHLIFFSTCACVEYYGKALEALVKSVKIMCIHGKMKHKRN 308
Query: 672 RISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXXXXXXX 731
+I EFR + ILV +DV ARG+D P+V V+Q P ++H
Sbjct: 309 KIFMEFRKLQSGILVCTDVMARGIDIPEVNWVLQYDPPSSASAFVHRCGRTARIGHGGSA 368
Query: 732 VLLLAPWEEYF 742
++ L P EE +
Sbjct: 369 LVFLLPMEESY 379
>TIGR_CMR|CPS_1726 [details] [associations]
symbol:CPS_1726 "RNA helicase DeaD" species:167879
"Colwellia psychrerythraea 34H" [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0009409 "response to cold" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:CP000083
GenomeReviews:CP000083_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268810 KO:K05592 InterPro:IPR005580
Pfam:PF03880 RefSeq:YP_268464.1 ProteinModelPortal:Q484Q1
STRING:Q484Q1 GeneID:3523325 KEGG:cps:CPS_1726 PATRIC:21466621
OMA:WIVKGVE ProtClustDB:CLSK741103
BioCyc:CPSY167879:GI48-1803-MONOMER Uniprot:Q484Q1
Length = 611
Score = 409 (149.0 bits), Expect = 1.1e-35, P = 1.1e-35
Identities = 117/363 (32%), Positives = 181/363 (49%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F G+ + A+ + G+ T +Q T+ L GKD + +A+TGTGK+ AF LPA+
Sbjct: 17 FASLGLPENLLSAVLSIGFTSATDIQALTIPPLLAGKDVLGEAQTGTGKTAAFGLPALAK 76
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALL-KNHDGIGVLTLVGGTRFKVD 499
+ TS QL ++L PTRELA Q+A EAI K+ G+ V TL GG +
Sbjct: 77 I--DTSIKKPQL------MVLAPTRELAMQVA-EAIESFGKDMKGLRVATLYGGQSYGPQ 127
Query: 500 QRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIV 559
++LE Q++V TPGRL+DH+ KS ++L L++ VLDEAD +L++GF +D++ I+
Sbjct: 128 FQQLERG-AQVVVGTPGRLMDHLRRKS---LKLDELRVCVLDEADEMLNMGFLEDIQWIL 183
Query: 560 DCLPRRRQSLLFSATMPKELVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILH 619
D +P+ Q LFSATMP + K + ++ V K K + ++ I
Sbjct: 184 DHIPKTAQMCLFSATMPPA-IRKIANRFLKDPEHIKVAAVKKAKANITQYAWKVS-GITK 241
Query: 620 HLLKEHILGTPDYK-VIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEFR 678
E I +Y +I+F T T + L + Q R+R ++ +
Sbjct: 242 MTALERIAEVVEYDAMIIFVRTRNDTVDIAEKLERAGYPALALNGDLNQAQRERCIDQMK 301
Query: 679 ASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXXXXXXXVLLLAPW 738
+ K ILV +DV ARG+D P ++ V+ +P D E Y+H + + P
Sbjct: 302 SGKSSILVATDVVARGLDIPRISLVINYDLPGDNEAYVHRIGRTGRAGREGMSIAFVRPR 361
Query: 739 EEY 741
E Y
Sbjct: 362 EMY 364
>TIGR_CMR|SO_4034 [details] [associations]
symbol:SO_4034 "ATP-dependent RNA helicase DeaD"
species:211586 "Shewanella oneidensis MR-1" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0009631 "cold
acclimation" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:AE014299 GenomeReviews:AE014299_GR InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268810 KO:K05592 InterPro:IPR005580
Pfam:PF03880 HSSP:P10081 OMA:LPQGMPK RefSeq:NP_719564.1
ProteinModelPortal:Q8EA75 GeneID:1171660 KEGG:son:SO_4034
PATRIC:23527732 ProtClustDB:CLSK907463 Uniprot:Q8EA75
Length = 623
Score = 409 (149.0 bits), Expect = 1.3e-35, P = 1.3e-35
Identities = 117/344 (34%), Positives = 183/344 (53%)
Query: 378 QKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPA 437
++ F E G+S ++AL GY + T +Q A++ + GKD + +A+TGTGK+ AF LP
Sbjct: 5 ERTFRELGLSENLLRALDELGYEKPTPIQSASIDPLMAGKDILGQAQTGTGKTGAFALPL 64
Query: 438 IEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFK 497
+ K TS +T Q +L+L PTRELA Q+A + K VL + GG +
Sbjct: 65 LN---KVTSQTTPQ------ILVLAPTRELAVQVAEAFSSYAKFMKNFHVLPIYGGQSMQ 115
Query: 498 VDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVEN 557
L+ P Q++V TPGR++DH+ + G +++L L+ LVLDEAD +L +GF D+E
Sbjct: 116 QQLNALKRGP-QVIVGTPGRVMDHM--RRG-TLKLETLQALVLDEADEMLKMGFIDDIEW 171
Query: 558 IVDCLPRRRQSLLFSATMPKELV-LKREHTYIDT-VGLGSVETPV-KIKQSCL-VAPHEL 613
I++ P +RQ LFSATMP+++ + +H T + + + T V I+Q + V+ H
Sbjct: 172 ILEHTPPQRQLALFSATMPEQIKRVANKHLKNATNISIAASHTTVDSIEQRFVQVSQHNK 231
Query: 614 HFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRI 673
++ L E+ G +I+F T L L ++ Q R+R
Sbjct: 232 LEALVRVLEVENTEG-----IIIFVRTRNSCVELAEKLEARGYASSPLHGDMNQQARERA 286
Query: 674 SEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 717
E+ + K IL+ +DV+ARG+D + VV IP D E Y+H
Sbjct: 287 VEQLKNGKLDILIATDVAARGLDVERIGHVVNYDIPYDTEAYVH 330
>TAIR|locus:2081061 [details] [associations]
symbol:AT3G06480 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0005773
"vacuole" evidence=IDA] [GO:0006635 "fatty acid beta-oxidation"
evidence=RCA] [GO:0016558 "protein import into peroxisome matrix"
evidence=RCA] InterPro:IPR000629 InterPro:IPR001202
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00397 PROSITE:PS00039 PROSITE:PS01159 PROSITE:PS50020
PROSITE:PS51194 SMART:SM00456 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005773 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0000184 GO:GO:0003723 EMBL:AC011623 Gene3D:2.20.70.10
SUPFAM:SSF51045 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K12823 IPI:IPI00528334 RefSeq:NP_187299.1
UniGene:At.27592 ProteinModelPortal:Q9SQV1 SMR:Q9SQV1 PaxDb:Q9SQV1
PRIDE:Q9SQV1 EnsemblPlants:AT3G06480.1 GeneID:819825
KEGG:ath:AT3G06480 GeneFarm:1016 TAIR:At3g06480
HOGENOM:HOG000154116 InParanoid:Q9SQV1 OMA:GMRENSF PhylomeDB:Q9SQV1
ProtClustDB:CLSN2915418 Genevestigator:Q9SQV1 GermOnline:AT3G06480
Uniprot:Q9SQV1
Length = 1088
Score = 417 (151.9 bits), Expect = 1.3e-35, P = 1.3e-35
Identities = 115/342 (33%), Positives = 177/342 (51%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F+ G+ P ++ L +AG+ T +Q T L+ +D V AKTG+GK++ +L+PA
Sbjct: 437 FESSGLPPEILRELLSAGFPSPTPIQAQTWPIALQSRDIVAIAKTGSGKTLGYLIPAF-- 494
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+L + ++ P VLIL PTRELA+QI EA+ ++ I L GG
Sbjct: 495 ILLRHCRNDSRNGPT--VLILAPTRELATQIQDEALRFGRS-SRISCTCLYGGAPKGPQL 551
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
+ LE I+VATPGRL D +E K + + +LVLDEAD +LD+GF + IV+
Sbjct: 552 KELERG-ADIVVATPGRLNDILEMKM---IDFQQVSLLVLDEADRMLDMGFEPQIRKIVN 607
Query: 561 CLPRRRQSLLFSATMPKELVLKREHTYIDTV--GLGSVETPVK---IKQSCLVAPHELHF 615
+P RRQ+L+++AT PKE+ ++ V +G V+ I Q V P
Sbjct: 608 EIPPRRQTLMYTATWPKEVRKIASDLLVNPVQVNIGRVDELAANKAITQYVEVVPQMEKE 667
Query: 616 QILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISE 675
+ L +L+ G+ KVI+FCST + L + ++ K Q RD +
Sbjct: 668 RRLEQILRSQERGS---KVIIFCSTKRLCDHLARSVGR-HFGAVVIHGDKTQGERDWVLN 723
Query: 676 EFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 717
+FR+ K +L+ +DV+ARG+D D+ V+ P E Y+H
Sbjct: 724 QFRSGKSCVLIATDVAARGLDIKDIRVVINYDFPTGVEDYVH 765
>UNIPROTKB|Q8EGU0 [details] [associations]
symbol:SO_1501 "ATP-dependent RNA helicase DEAD box family"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 HOGENOM:HOG000268807
OMA:GGANMNP RefSeq:NP_717118.1 ProteinModelPortal:Q8EGU0
GeneID:1169311 KEGG:son:SO_1501 PATRIC:23522644
ProtClustDB:CLSK906294 Uniprot:Q8EGU0
Length = 456
Score = 392 (143.0 bits), Expect = 1.3e-35, P = 1.3e-35
Identities = 112/365 (30%), Positives = 184/365 (50%)
Query: 380 RFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIE 439
+FD G+S + A+T GY Q+T+VQ+ + L GKD + A+TGTGK+ AF LP +E
Sbjct: 2 KFDTLGLSSPLLNAITECGYQQLTQVQQQVIPLALVGKDIMACAQTGTGKTAAFALPVLE 61
Query: 440 AVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVD 499
+ + P + L++ PTRELA Q+ A I + L + GG
Sbjct: 62 QLAAKPADK-----PLLRALVMTPTRELAIQVCAN-IQKYSQFLPLKTLAVYGGANMNPQ 115
Query: 500 QRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIV 559
++ +E ILVATPGRL D I ++ L + LV+DEAD +LDLGF +D+E +
Sbjct: 116 RKGVEQG-VDILVATPGRLFDIIGQ---FNLDLSSVTTLVIDEADRMLDLGFVRDIEKVK 171
Query: 560 DCLPRRRQSLLFSATMPKELVLKREHTYIDT---VGLGSVETPVKIKQSCLVAPHELHFQ 616
+ Q++LFSAT + V + H ++ V + T ++Q LV + + +
Sbjct: 172 RLIAPVHQTMLFSATY-SDAVKQLSHKMLNQPQWVNVAENTTASTVEQ--LV--YRVDKR 226
Query: 617 ILHHLLKEHILGTPDYK-VIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISE 675
LL E ++G +++ V+VF ST L L ++ + K Q R+R+ +
Sbjct: 227 RKAELLSE-LVGRNNWRQVLVFASTKECAEHLLQELTLDGISAGVFHGDKTQGARNRVLD 285
Query: 676 EFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXXXXXXXVLLL 735
+F+A K +LV +DV+ARG+D + V+ + +P E Y+H + +
Sbjct: 286 DFKAGKLRVLVATDVAARGLDIQALPLVINLELPFLAEDYVHRIGRTGRAGLSGRAISFV 345
Query: 736 APWEE 740
+P ++
Sbjct: 346 SPADD 350
>UNIPROTKB|Q8EI96 [details] [associations]
symbol:srmB "ATP-dependent RNA helicase SrmB"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 OMA:PLAMDQR
HOGENOM:HOG000268807 KO:K05590 ProtClustDB:PRK11192
RefSeq:NP_716576.1 ProteinModelPortal:Q8EI96 GeneID:1168793
KEGG:son:SO_0947 PATRIC:23521551 Uniprot:Q8EI96
Length = 420
Score = 392 (143.0 bits), Expect = 1.3e-35, P = 1.3e-35
Identities = 114/345 (33%), Positives = 183/345 (53%)
Query: 380 RFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIE 439
+F++ + P +++L A G++ T +Q+ TL LE +D + +A TGTGK+ +FLLPA++
Sbjct: 2 QFEDFQLDPSLLESLKAMGHLSPTTIQQETLPHALEQRDILARAPTGTGKTASFLLPALQ 61
Query: 440 AVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVD 499
++ + Q VLIL PTRELASQI A L + G+ + + GG +
Sbjct: 62 HLIDFPRRYSGQA----RVLILTPTRELASQIHRYACHLATDQ-GLNIAIITGGVPYAPQ 116
Query: 500 QRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIV 559
+ L+ + ILVATPGRL+++++ K S + +L++DEAD +LD+GF V+ I
Sbjct: 117 EEALKGN-IDILVATPGRLMEYLD-KGKFSAE--SVDILIIDEADRMLDMGFSAVVKAIA 172
Query: 560 DCLPRRRQSLLFSATMPKELVLKREHTYI-DTVGLGSVETP----VKIKQSCLVAPHELH 614
R+Q++LFSAT+ V++ + D + + V+ P KI Q +A + H
Sbjct: 173 LEAQGRKQNMLFSATLEGSGVIRFAREVLNDPIEI-DVDAPRKEKAKIHQWIHLADDKDH 231
Query: 615 -FQILHHLLKEHILGTPDYK-VIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDR 672
F +L HLLK+ D K IVF T V S L L + + M Q R +
Sbjct: 232 KFALLCHLLKQE-----DVKRAIVFVKTRDVVSSLEGQLLQAGIPCAFMRGDMEQKKRFQ 286
Query: 673 ISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 717
F + +L+ +DV+ARG+D D++ V+ +P + YIH
Sbjct: 287 ALSRFTKGEVNVLLATDVAARGIDIDDISHVINFDMPRSADTYIH 331
>TIGR_CMR|SO_0947 [details] [associations]
symbol:SO_0947 "ATP-dependent RNA helicase SrmB"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 OMA:PLAMDQR
HOGENOM:HOG000268807 KO:K05590 ProtClustDB:PRK11192
RefSeq:NP_716576.1 ProteinModelPortal:Q8EI96 GeneID:1168793
KEGG:son:SO_0947 PATRIC:23521551 Uniprot:Q8EI96
Length = 420
Score = 392 (143.0 bits), Expect = 1.3e-35, P = 1.3e-35
Identities = 114/345 (33%), Positives = 183/345 (53%)
Query: 380 RFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIE 439
+F++ + P +++L A G++ T +Q+ TL LE +D + +A TGTGK+ +FLLPA++
Sbjct: 2 QFEDFQLDPSLLESLKAMGHLSPTTIQQETLPHALEQRDILARAPTGTGKTASFLLPALQ 61
Query: 440 AVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVD 499
++ + Q VLIL PTRELASQI A L + G+ + + GG +
Sbjct: 62 HLIDFPRRYSGQA----RVLILTPTRELASQIHRYACHLATDQ-GLNIAIITGGVPYAPQ 116
Query: 500 QRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIV 559
+ L+ + ILVATPGRL+++++ K S + +L++DEAD +LD+GF V+ I
Sbjct: 117 EEALKGN-IDILVATPGRLMEYLD-KGKFSAE--SVDILIIDEADRMLDMGFSAVVKAIA 172
Query: 560 DCLPRRRQSLLFSATMPKELVLKREHTYI-DTVGLGSVETP----VKIKQSCLVAPHELH 614
R+Q++LFSAT+ V++ + D + + V+ P KI Q +A + H
Sbjct: 173 LEAQGRKQNMLFSATLEGSGVIRFAREVLNDPIEI-DVDAPRKEKAKIHQWIHLADDKDH 231
Query: 615 -FQILHHLLKEHILGTPDYK-VIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDR 672
F +L HLLK+ D K IVF T V S L L + + M Q R +
Sbjct: 232 KFALLCHLLKQE-----DVKRAIVFVKTRDVVSSLEGQLLQAGIPCAFMRGDMEQKKRFQ 286
Query: 673 ISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 717
F + +L+ +DV+ARG+D D++ V+ +P + YIH
Sbjct: 287 ALSRFTKGEVNVLLATDVAARGIDIDDISHVINFDMPRSADTYIH 331
>TIGR_CMR|SO_1501 [details] [associations]
symbol:SO_1501 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 HOGENOM:HOG000268807
OMA:GGANMNP RefSeq:NP_717118.1 ProteinModelPortal:Q8EGU0
GeneID:1169311 KEGG:son:SO_1501 PATRIC:23522644
ProtClustDB:CLSK906294 Uniprot:Q8EGU0
Length = 456
Score = 392 (143.0 bits), Expect = 1.3e-35, P = 1.3e-35
Identities = 112/365 (30%), Positives = 184/365 (50%)
Query: 380 RFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIE 439
+FD G+S + A+T GY Q+T+VQ+ + L GKD + A+TGTGK+ AF LP +E
Sbjct: 2 KFDTLGLSSPLLNAITECGYQQLTQVQQQVIPLALVGKDIMACAQTGTGKTAAFALPVLE 61
Query: 440 AVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVD 499
+ + P + L++ PTRELA Q+ A I + L + GG
Sbjct: 62 QLAAKPADK-----PLLRALVMTPTRELAIQVCAN-IQKYSQFLPLKTLAVYGGANMNPQ 115
Query: 500 QRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIV 559
++ +E ILVATPGRL D I ++ L + LV+DEAD +LDLGF +D+E +
Sbjct: 116 RKGVEQG-VDILVATPGRLFDIIGQ---FNLDLSSVTTLVIDEADRMLDLGFVRDIEKVK 171
Query: 560 DCLPRRRQSLLFSATMPKELVLKREHTYIDT---VGLGSVETPVKIKQSCLVAPHELHFQ 616
+ Q++LFSAT + V + H ++ V + T ++Q LV + + +
Sbjct: 172 RLIAPVHQTMLFSATY-SDAVKQLSHKMLNQPQWVNVAENTTASTVEQ--LV--YRVDKR 226
Query: 617 ILHHLLKEHILGTPDYK-VIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISE 675
LL E ++G +++ V+VF ST L L ++ + K Q R+R+ +
Sbjct: 227 RKAELLSE-LVGRNNWRQVLVFASTKECAEHLLQELTLDGISAGVFHGDKTQGARNRVLD 285
Query: 676 EFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXXXXXXXVLLL 735
+F+A K +LV +DV+ARG+D + V+ + +P E Y+H + +
Sbjct: 286 DFKAGKLRVLVATDVAARGLDIQALPLVINLELPFLAEDYVHRIGRTGRAGLSGRAISFV 345
Query: 736 APWEE 740
+P ++
Sbjct: 346 SPADD 350
>TAIR|locus:2173517 [details] [associations]
symbol:AT5G60990 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0009220
"pyrimidine ribonucleotide biosynthetic process" evidence=RCA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0003723 EMBL:AB008269 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268802 KO:K14777 OMA:IFIPSKF
EMBL:AK117799 EMBL:BT005375 EMBL:AY088068 EMBL:AJ010462
IPI:IPI00518446 PIR:T51342 RefSeq:NP_568931.1 UniGene:At.20430
ProteinModelPortal:Q8GY84 SMR:Q8GY84 STRING:Q8GY84 PaxDb:Q8GY84
PRIDE:Q8GY84 EnsemblPlants:AT5G60990.1 GeneID:836220
KEGG:ath:AT5G60990 GeneFarm:923 TAIR:At5g60990 InParanoid:Q8GY84
PhylomeDB:Q8GY84 ProtClustDB:CLSN2690059 Genevestigator:Q8GY84
GermOnline:AT5G60990 Uniprot:Q8GY84
Length = 456
Score = 392 (143.0 bits), Expect = 1.3e-35, P = 1.3e-35
Identities = 117/372 (31%), Positives = 179/372 (48%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
K F E G+ +KA G+ +++Q L LEGKD + A+TG+GK+ AF +P +
Sbjct: 9 KTFAELGVREELVKACERLGWKNPSKIQAEALPFALEGKDVIGLAQTGSGKTGAFAIPIL 68
Query: 439 EAVLKATSSSTTQLV----PPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGT 494
+A+L+ S + P + +L PTRELA QIA E L + LVGG
Sbjct: 69 QALLEYVYDSEPKKGRRPDPAFFACVLSPTRELAIQIA-EQFEALGADISLRCAVLVGGI 127
Query: 495 RFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKD 554
L P ++VATPGRL DH+ + G S++ LK LVLDEAD LL+ F K
Sbjct: 128 DRMQQTIALGKRP-HVIVATPGRLWDHMSDTKGFSLK--SLKYLVLDEADRLLNEDFEKS 184
Query: 555 VENIVDCLPRRRQSLLFSATMPKEL-VLKRE--HTYIDTVGLGSVETPVKIKQSCLVAPH 611
+ I++ +P R++ LFSATM K++ L+R + T +KQ
Sbjct: 185 LNQILEEIPLERKTFLFSATMTKKVRKLQRACLRNPVKIEAASKYSTVDTLKQQYRFVAA 244
Query: 612 ELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRD 671
+ L ++L E P+ ++F T T L L+LR + + + Q R
Sbjct: 245 KYKDCYLVYILSE----MPESTSMIFTRTCDGTRFLALVLRSLGFRAIPISGQMTQSKRL 300
Query: 672 RISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXXXXXXX 731
+F+A + ILV +DV++RG+D P V V+ IP + + YIH
Sbjct: 301 GALNKFKAGECNILVCTDVASRGLDIPSVDVVINYDIPTNSKDYIHRVGRTARAGRSGVG 360
Query: 732 VLLLAPWE-EYF 742
+ L+ +E E++
Sbjct: 361 ISLVNQYELEWY 372
>WB|WBGene00006888 [details] [associations]
symbol:vbh-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040010 "positive regulation of
growth rate" evidence=IMP] [GO:0032502 "developmental process"
evidence=IMP] [GO:0040035 "hermaphrodite genitalia development"
evidence=IMP] [GO:0042006 "masculinization of hermaphroditic
germ-line" evidence=IMP] [GO:0042127 "regulation of cell
proliferation" evidence=IMP] [GO:0040020 "regulation of meiosis"
evidence=IMP] [GO:0007281 "germ cell development" evidence=IMP]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0043186 "P granule"
evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0009792
GO:GO:0040010 GO:GO:0003676 GO:GO:0042127 GO:GO:0040035
GO:GO:0007281 GO:GO:0040020 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043186 GeneTree:ENSGT00620000087942
HOGENOM:HOG000268804 KO:K11594 OMA:DELLMEN EMBL:FO081614
GO:GO:0042006 RefSeq:NP_001021793.1 UniGene:Cel.16952
ProteinModelPortal:Q65XX1 SMR:Q65XX1 IntAct:Q65XX1
MINT:MINT-6669731 STRING:Q65XX1 PaxDb:Q65XX1 PRIDE:Q65XX1
EnsemblMetazoa:Y54E10A.9c.1 EnsemblMetazoa:Y54E10A.9c.2
GeneID:171888 KEGG:cel:CELE_Y54E10A.9 UCSC:Y54E10A.9a CTD:171888
WormBase:Y54E10A.9c InParanoid:Q65XX1 NextBio:873115
ArrayExpress:Q65XX1 Uniprot:Q65XX1
Length = 660
Score = 409 (149.0 bits), Expect = 2.0e-35, P = 2.0e-35
Identities = 126/360 (35%), Positives = 187/360 (51%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
+ F+E G P ++ + +GY + T VQ+ ++ L +D + A+TG+GK+ AFLLP I
Sbjct: 139 EHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCAQTGSGKTAAFLLPII 198
Query: 439 EAVLKATSSSTTQLVPPIYV----------LILCPTRELASQIAAEAIALLKNHDGIGVL 488
+ +L + + PP + L+L PTRELA QI EA I
Sbjct: 199 QHIL---AGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQIHKEATKF-SYKSNIQTA 254
Query: 489 TLVGGTRFKVDQ-RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLL 547
L GG DQ RL + IL+ATPGRL+D IE G + L G + LVLDEAD +L
Sbjct: 255 ILYGGRENYRDQVNRLRAGT-HILIATPGRLIDIIEQ--GF-IGLAGCRYLVLDEADRML 310
Query: 548 DLGFRKDVENIV-DCLPRR--RQSLLFSATMPKEL-VLKREH---TYIDTVGLGSV-ETP 599
D+GF + IV +P + R + +FSAT PKE+ VL ++ YI + +G V T
Sbjct: 311 DMGFEPQIRKIVGQGMPPKTARTTAMFSATFPKEIQVLAKDFLKDNYI-FLAVGRVGSTS 369
Query: 600 VKIKQSCL-VAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGM-VTSLLYLLLREMKMN 657
I+Q L V E ++ L+ EH + V+VF T L Y L R+ +
Sbjct: 370 ENIEQRLLWVNEMEKRSNLMEILMNEH----SENLVLVFVETKRGANELAYFLNRQQIRS 425
Query: 658 VREMYSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 717
V ++ Q+ R+R E FR+ + ILV + V+ARG+D P+V V+ +P D ++Y+H
Sbjct: 426 V-SIHGDLKQIERERNLELFRSGQCPILVATAVAARGLDIPNVRHVINYDLPGDSDEYVH 484
>UNIPROTKB|Q0C354 [details] [associations]
symbol:rhlE "ATP-dependent RNA helicase RhlE"
species:228405 "Hyphomonas neptunium ATCC 15444" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:CP000158
GenomeReviews:CP000158_GR GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927
RefSeq:YP_759839.1 ProteinModelPortal:Q0C354 STRING:Q0C354
GeneID:4290097 KEGG:hne:HNE_1118 PATRIC:32215041 OMA:KHGSEKL
BioCyc:HNEP228405:GI69-1155-MONOMER Uniprot:Q0C354
Length = 464
Score = 390 (142.3 bits), Expect = 2.2e-35, P = 2.2e-35
Identities = 116/342 (33%), Positives = 175/342 (51%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F G++ + +LT AGY T +QE + ++G+D V A+TGTGK++AF P ++
Sbjct: 9 FQSLGLTGRILTSLTKAGYTAPTPIQEQAIPLVIQGRDIVGLAQTGTGKTLAFAAPILDR 68
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+ + S + V VL+L PTRELA QIA + + V+ + GG +
Sbjct: 69 LSRNASPAP---VRGTRVLVLAPTRELAGQIAT-SFGTYGAGLNLRVVMVCGGAKIGGQI 124
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
R+LE ILVATPGRL+D +E ++ V L ++ L+LDEAD +LDLGF + I
Sbjct: 125 RQLERG-AHILVATPGRLIDLMEQRA---VSLDKVETLILDEADQMLDLGFIHALRAIAK 180
Query: 561 CLPRRRQSLLFSATMPKELVLKREHTYIDTVGLGSVETPV----KIKQS-CLVAPHELHF 615
+P +RQ+L FSATMPK V T++ SV P +I+Q C V E
Sbjct: 181 NVPSKRQTLFFSATMPKA-VESLAATFLRNPAEVSVAPPATTAGRIEQRVCFVEQPEKA- 238
Query: 616 QILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISE 675
LL E I IVF T + L + ++ ++ K Q R++ E
Sbjct: 239 ----SLLIEKIRDPELRSAIVFTRTKHGADGVVKRLAKADIDSVAIHGNKSQSQREKALE 294
Query: 676 EFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 717
F+A + ILV +D++ARG+ +T V+ +P EQ++H
Sbjct: 295 AFKAGRVPILVATDIAARGIHVDALTHVINYDLPDVPEQFVH 336
>UNIPROTKB|P96614 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:224308 "Bacillus subtilis subsp. subtilis str. 168"
[GO:0003723 "RNA binding" evidence=IDA] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IDA] [GO:0009409
"response to cold" evidence=IGI] [GO:0010501 "RNA secondary
structure unwinding" evidence=IDA] [GO:0043590 "bacterial nucleoid"
evidence=IDA] [GO:0005840 "ribosome" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005737 GO:GO:0009409
GO:GO:0003723 EMBL:AL009126 GenomeReviews:AL009126_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043590
HOGENOM:HOG000268810 HSSP:Q58083 ProtClustDB:CLSK886742
EMBL:AB001488 PIR:D69772 RefSeq:NP_388339.1
ProteinModelPortal:P96614 SMR:P96614 IntAct:P96614 DNASU:938170
EnsemblBacteria:EBBACT00000000739 GeneID:938170 KEGG:bsu:BSU04580
PATRIC:18972500 GenoList:BSU04580 BioCyc:BSUB:BSU04580-MONOMER
GO:GO:0010501 Uniprot:P96614
Length = 494
Score = 389 (142.0 bits), Expect = 2.8e-35, P = 2.8e-35
Identities = 114/363 (31%), Positives = 177/363 (48%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F + +S +KA+ G+ + T +Q T+ L KD + +A+TGTGK+ AF +P +E
Sbjct: 5 FQDFNLSSDLMKAINRMGFEEATPIQAQTIPLGLSNKDVIGQAQTGTGKTAAFGIPLVE- 63
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
K S P I +++ PTRELA Q++ E + ++ VL + GG
Sbjct: 64 --KINPES-----PNIQAIVIAPTRELAIQVSEELYKIGQDKRA-KVLPIYGGQDIGRQI 115
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
R L+ +P I+V TPGRLLDHI ++ +RL + +V+DEAD +L++GF D+E+I+
Sbjct: 116 RALKKNP-NIIVGTPGRLLDHINRRT---IRLNNVNTVVMDEADEMLNMGFIDDIESILS 171
Query: 561 CLPRRRQSLLFSATMPKEL--VLKREHTYIDTVGLGSVETPVK-IKQSCLVAPHELHFQI 617
+P Q+LLFSATMP + + +R T + V + + E V I+Q L F
Sbjct: 172 NVPSEHQTLLFSATMPAPIKRIAERFMTEPEHVKVKAKEMTVSNIQQFYLEVQERKKFDT 231
Query: 618 LHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEF 677
L LL + +P+ IVF T L L ++ Q R +F
Sbjct: 232 LTRLLD---IQSPEL-AIVFGRTKRRVDELAEALNLRGYAAEGIHGDLTQAKRMVALRKF 287
Query: 678 RASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXXXXXXXVLLLAP 737
+ +LV +DV+ARG+D VT V +P D E Y+H + + P
Sbjct: 288 KEGAIEVLVATDVAARGLDISGVTHVYNFDVPQDPESYVHRIGRTGRAGKTGMAMTFITP 347
Query: 738 WEE 740
E+
Sbjct: 348 REK 350
>UNIPROTKB|Q83DM8 [details] [associations]
symbol:rhlE "ATP-dependent RNA helicase" species:227377
"Coxiella burnetii RSA 493" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:AE016828 GenomeReviews:AE016828_GR InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927 OMA:HLIKQHN
RefSeq:NP_819700.2 ProteinModelPortal:Q83DM8 GeneID:1208557
KEGG:cbu:CBU_0670 PATRIC:17930019 ProtClustDB:CLSK914228
BioCyc:CBUR227377:GJ7S-666-MONOMER Uniprot:Q83DM8
Length = 420
Score = 389 (142.0 bits), Expect = 2.8e-35, P = 2.8e-35
Identities = 107/338 (31%), Positives = 167/338 (49%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F+ G+S ++A+ GY++ T VQ + L+ +D +V A+TGTGK+ F LP ++
Sbjct: 12 FEVLGLSAELLRAIREQGYVEPTPVQRQAIPVILQARDVMVTAQTGTGKTAGFTLPLLQR 71
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+ + P I LIL PTRELA Q+ E + + + + GG K
Sbjct: 72 LFVSRPPLQRSAKPVIRALILTPTRELAVQVF-ECVRAYGKYLPLKATVVHGGVSIKPQI 130
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
L ILVATPGRLLD + N+ L+ L ++ VLDEAD +LD+GF D+ I+
Sbjct: 131 NHLRRG-VDILVATPGRLLDLV-NQGVLN--LSRVEFFVLDEADRMLDMGFLPDIRRILK 186
Query: 561 CLPRRRQSLLFSATMPKELVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILHH 620
LP RQ+LLFSAT KE + + + + L V H + Q
Sbjct: 187 LLPESRQNLLFSATFSKE-IKELTDKLLHSPALIEVARRNTAAARITHVVHPVDRQRKRE 245
Query: 621 LLKEHILGTPDYK-VIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEFRA 679
LL ++G+ +++ V+VF T + L L ++ ++ K Q R R +F+
Sbjct: 246 LLS-FMIGSKNWRQVLVFTRTKHGANRLSQQLESDGLSSAAIHGNKSQAARMRALTQFKQ 304
Query: 680 SKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 717
K +LV +DV+ARG+D + V+ +P + Y+H
Sbjct: 305 GKIRVLVATDVAARGLDIDKLPHVINFELPDAAKDYVH 342
>TIGR_CMR|CBU_0670 [details] [associations]
symbol:CBU_0670 "ATP-dependent RNA helicase RhlE,
putative" species:227377 "Coxiella burnetii RSA 493" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE016828 GenomeReviews:AE016828_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927
OMA:HLIKQHN RefSeq:NP_819700.2 ProteinModelPortal:Q83DM8
GeneID:1208557 KEGG:cbu:CBU_0670 PATRIC:17930019
ProtClustDB:CLSK914228 BioCyc:CBUR227377:GJ7S-666-MONOMER
Uniprot:Q83DM8
Length = 420
Score = 389 (142.0 bits), Expect = 2.8e-35, P = 2.8e-35
Identities = 107/338 (31%), Positives = 167/338 (49%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F+ G+S ++A+ GY++ T VQ + L+ +D +V A+TGTGK+ F LP ++
Sbjct: 12 FEVLGLSAELLRAIREQGYVEPTPVQRQAIPVILQARDVMVTAQTGTGKTAGFTLPLLQR 71
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+ + P I LIL PTRELA Q+ E + + + + GG K
Sbjct: 72 LFVSRPPLQRSAKPVIRALILTPTRELAVQVF-ECVRAYGKYLPLKATVVHGGVSIKPQI 130
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
L ILVATPGRLLD + N+ L+ L ++ VLDEAD +LD+GF D+ I+
Sbjct: 131 NHLRRG-VDILVATPGRLLDLV-NQGVLN--LSRVEFFVLDEADRMLDMGFLPDIRRILK 186
Query: 561 CLPRRRQSLLFSATMPKELVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILHH 620
LP RQ+LLFSAT KE + + + + L V H + Q
Sbjct: 187 LLPESRQNLLFSATFSKE-IKELTDKLLHSPALIEVARRNTAAARITHVVHPVDRQRKRE 245
Query: 621 LLKEHILGTPDYK-VIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEFRA 679
LL ++G+ +++ V+VF T + L L ++ ++ K Q R R +F+
Sbjct: 246 LLS-FMIGSKNWRQVLVFTRTKHGANRLSQQLESDGLSSAAIHGNKSQAARMRALTQFKQ 304
Query: 680 SKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 717
K +LV +DV+ARG+D + V+ +P + Y+H
Sbjct: 305 GKIRVLVATDVAARGLDIDKLPHVINFELPDAAKDYVH 342
>ZFIN|ZDB-GENE-021212-1 [details] [associations]
symbol:ddx55 "DEAD (Asp-Glu-Ala-Asp) box polypeptide
55" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
ZFIN:ZDB-GENE-021212-1 GO:GO:0007275 GO:GO:0005524 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
InterPro:IPR025313 Pfam:PF13959 HSSP:P26196 CTD:57696
HOGENOM:HOG000268803 HOVERGEN:HBG107796 KO:K14809 OrthoDB:EOG4WH8KN
EMBL:AF506203 EMBL:BC059534 IPI:IPI00493927 RefSeq:NP_775336.1
UniGene:Dr.16883 ProteinModelPortal:Q8JHJ2 STRING:Q8JHJ2
GeneID:286745 KEGG:dre:286745 InParanoid:Q8JHJ2 NextBio:20806420
ArrayExpress:Q8JHJ2 Uniprot:Q8JHJ2
Length = 593
Score = 404 (147.3 bits), Expect = 3.0e-35, P = 3.0e-35
Identities = 119/366 (32%), Positives = 178/366 (48%)
Query: 391 IKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTT 450
++ L G+ MT VQ A + + KD +A TG+GK++AF++PA+E +LK
Sbjct: 21 LQTLKELGFTYMTPVQSACIPLFMSNKDVAAEAVTGSGKTLAFVIPALEILLKREEKLKK 80
Query: 451 QLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQI 510
V LI+ PTRELA QI+ L+ + L+GG+ D +L++ I
Sbjct: 81 MQVG---ALIITPTRELAMQISEVMGRFLQGFPQFTQILLIGGSNPIEDVEKLKTQGANI 137
Query: 511 LVATPGRLLDHIENKSG---LSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQ 567
++ATPGRL D K+ L+ + L +LVLDEAD LLD+GF + I+ LP++R+
Sbjct: 138 IIATPGRLEDMFRRKADGLDLATAVKSLDVLVLDEADRLLDMGFEASLNTILGYLPKQRR 197
Query: 568 SLLFSATMPKEL--VLK---REHTYIDT----VGLGSVE-TPVKIKQSCLVAPHELHFQI 617
+ LFSAT +EL +++ R I V SV+ TP K+ + E F
Sbjct: 198 TGLFSATQTQELEKLVRAGLRNPVRITVKEKGVAASSVQKTPAKLSNYYTMCRAEEKFNT 257
Query: 618 LHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVR-EMYSRKPQLYRDRISEE 676
L L++H K +VF ST L + NV K + R++I +
Sbjct: 258 LVAFLRQH----KHEKQLVFFSTCACVEYFGKALEVLVKNVSIHCIHGKMKHKRNKIFAD 313
Query: 677 FRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXXXXXXXVLLLA 736
FRA K ILV +DV ARG+D P+V V+Q P ++H ++ L
Sbjct: 314 FRALKSGILVCTDVMARGIDIPEVNWVLQYDPPSSASSFVHRCGRTARIGNQGNALVFLL 373
Query: 737 PWEEYF 742
P EE +
Sbjct: 374 PMEESY 379
>UNIPROTKB|Q9H8H2 [details] [associations]
symbol:DDX31 "Probable ATP-dependent RNA helicase DDX31"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:AL354735 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959 KO:K14806
EMBL:AF427339 EMBL:AF335567 EMBL:AF335568 EMBL:AF335569
EMBL:AK023695 EMBL:AK027002 EMBL:AK027484 EMBL:AL160165
EMBL:BC012726 IPI:IPI00043990 IPI:IPI00291296 IPI:IPI00552374
IPI:IPI00552716 RefSeq:NP_073616.6 RefSeq:NP_619526.1
UniGene:Hs.660767 ProteinModelPortal:Q9H8H2 SMR:Q9H8H2
IntAct:Q9H8H2 PhosphoSite:Q9H8H2 DMDM:71153334 SWISS-2DPAGE:Q9H8H2
PaxDb:Q9H8H2 PRIDE:Q9H8H2 DNASU:64794 Ensembl:ENST00000310532
Ensembl:ENST00000372153 Ensembl:ENST00000372155
Ensembl:ENST00000372159 GeneID:64794 KEGG:hsa:64794 UCSC:uc004cbq.1
UCSC:uc004cbs.2 UCSC:uc010mzu.1 CTD:64794 GeneCards:GC09M135468
HGNC:HGNC:16715 HPA:HPA020891 neXtProt:NX_Q9H8H2 PharmGKB:PA27218
HOVERGEN:HBG103793 InParanoid:Q9H8H2 OMA:ARIGCHG OrthoDB:EOG42V8FK
PhylomeDB:Q9H8H2 GenomeRNAi:64794 NextBio:66862 ArrayExpress:Q9H8H2
Bgee:Q9H8H2 CleanEx:HS_DDX31 Genevestigator:Q9H8H2
GermOnline:ENSG00000125485 Uniprot:Q9H8H2
Length = 851
Score = 326 (119.8 bits), Expect = 3.8e-35, Sum P(4) = 3.8e-35
Identities = 82/227 (36%), Positives = 130/227 (57%)
Query: 375 ILSQKRFDECGISPLTIKAL-TAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAF 433
+ + F E G+ P I + T MT VQ+ ++ LEG+DA+V+++TG+GK++A+
Sbjct: 226 VFTSAAFHELGLHPHLISTINTVLKMSSMTSVQKQSIPVLLEGRDALVRSQTGSGKTLAY 285
Query: 434 LLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGG 493
+P +++ L+A S + P Y L+L PTRELA Q LLK I L+GG
Sbjct: 286 CIPVVQS-LQAMESKIQRSDGP-YALVLVPTRELALQSFDTVQKLLKPFTWIVPGVLMGG 343
Query: 494 TRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRK 553
+ K ++ RL IL++TPGRL+DHI KS ++ L+ LV DEAD +LDLGF K
Sbjct: 344 EKRKSEKARLRKG-INILISTPGRLVDHI--KSTKNIHFSRLRWLVFDEADRILDLGFEK 400
Query: 554 DVE---NIVDCLPRRRQSLLFSATMPKELVLKREHTYIDTVGLGSVE 597
D+ N V+ ++RQ++L SAT+ + + + + D V + ++
Sbjct: 401 DITVILNAVNAECQKRQNVLLSATLTEGVTRLADISLHDPVSISVLD 447
Score = 131 (51.2 bits), Expect = 3.8e-35, Sum P(4) = 3.8e-35
Identities = 30/89 (33%), Positives = 46/89 (51%)
Query: 654 MKMNVREMYSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDRE 713
M++ ++ Q R + +EF S+R +L+ +DV+ARG+D P VT +VQ P
Sbjct: 551 MRLKFLRLHGGMEQEERTAVFQEFSHSRRGVLLCTDVAARGLDLPQVTWIVQYNAPSSPA 610
Query: 714 QYIHXXXXXXXXXXXXXXVLLLAPWE-EY 741
+YIH +L+LAP E EY
Sbjct: 611 EYIHRIGRTARIGCHGSSLLILAPSEAEY 639
Score = 52 (23.4 bits), Expect = 3.8e-35, Sum P(4) = 3.8e-35
Identities = 16/58 (27%), Positives = 24/58 (41%)
Query: 593 LGSVETPVKIKQSCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLL 650
L S P +KQ V P +L L + + D K++VF S+ + Y L
Sbjct: 472 LDSFAIPESLKQHVTVVPSKLRLVCLAAFILQKCKFEEDQKMVVFFSSCELVEFHYSL 529
Score = 38 (18.4 bits), Expect = 3.8e-35, Sum P(4) = 3.8e-35
Identities = 8/22 (36%), Positives = 12/22 (54%)
Query: 89 NQHKPMSPDEHVKALADRFMKE 110
N K SP +H + +DR +E
Sbjct: 174 NAQKMFSPKKHSVSTSDRNQEE 195
>UNIPROTKB|Q65N62 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:279010 "Bacillus licheniformis DSM 13 = ATCC 14580"
[GO:0003723 "RNA binding" evidence=ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] [GO:0005524 "ATP binding"
evidence=ISS] [GO:0043590 "bacterial nucleoid" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005737 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043590
HOGENOM:HOG000268810 OMA:IIDHINR HSSP:Q58083 EMBL:AE017333
EMBL:CP000002 RefSeq:YP_006711973.1 RefSeq:YP_077785.1
ProteinModelPortal:Q65N62 STRING:Q65N62 DNASU:3098967
EnsemblBacteria:EBBACT00000055567 EnsemblBacteria:EBBACT00000059427
GeneID:3030407 GeneID:3098967 GenomeReviews:AE017333_GR
GenomeReviews:CP000002_GR KEGG:bld:BLi00546 KEGG:bli:BL02197
PATRIC:18946609 ProtClustDB:CLSK886742
BioCyc:BLIC279010:GJ2P-538-MONOMER Uniprot:Q65N62
Length = 487
Score = 387 (141.3 bits), Expect = 4.7e-35, P = 4.7e-35
Identities = 116/357 (32%), Positives = 176/357 (49%)
Query: 387 SPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATS 446
S LT KA+ G+ + T +Q T+ L KD + +A+TGTGK+ AF +P +E K
Sbjct: 12 SDLT-KAIKRMGFEEATPIQAQTIPLGLANKDVIGQAQTGTGKTAAFGIPLVE---KINP 67
Query: 447 SSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESD 506
S P I +++ PTRELA Q++ E + ++ VL + GG R L+ +
Sbjct: 68 ES-----PNIQAIVIAPTRELAIQVSEELYKIGQDKRA-RVLPIYGGQDIGRQIRALKKN 121
Query: 507 PCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRR 566
P I+V TPGRLLDHI ++ +RL + +VLDEAD +L++GF +D+E+I+ +P
Sbjct: 122 P-HIIVGTPGRLLDHINRRT---MRLQTVNTVVLDEADEMLNMGFIEDIESILSNVPAEH 177
Query: 567 QSLLFSATMPKEL--VLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELH-FQILHHLLK 623
Q+LLFSATMP + + +R T + V + + E V Q + HE F L LL
Sbjct: 178 QTLLFSATMPAPIKRIAERFMTNPEHVKVKAKEMTVSNIQQFYLEVHERKKFDTLTRLLD 237
Query: 624 EHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEFRASKRL 683
+ +P+ IVF T L L ++ Q R +F+
Sbjct: 238 ---IQSPEL-AIVFGRTKRRVDELTEALNLRGYTAEGIHGDLTQAKRMVALRKFKQGAIE 293
Query: 684 ILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXXXXXXXVLLLAPWEE 740
+LV +DV+ARG+D VT V +P D E Y+H + + P E+
Sbjct: 294 VLVATDVAARGLDISGVTHVYNFDVPQDPESYVHRIGRTGRAGKTGMAMTFITPREK 350
>ASPGD|ASPL0000006660 [details] [associations]
symbol:AN5931 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0000184 GO:GO:0003723 EMBL:BN001301
EMBL:AACD01000101 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823 RefSeq:XP_663535.1
ProteinModelPortal:Q5B0J9 STRING:Q5B0J9 PRIDE:Q5B0J9
EnsemblFungi:CADANIAT00007099 GeneID:2870997 KEGG:ani:AN5931.2
OMA:IDAMSGY OrthoDB:EOG47SWP6 Uniprot:Q5B0J9
Length = 563
Score = 399 (145.5 bits), Expect = 5.1e-35, P = 5.1e-35
Identities = 117/346 (33%), Positives = 181/346 (52%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
FDE G + + A G+ + T +Q L G+D V A+TG+GK++++ LPAI
Sbjct: 142 FDEAGFPQYVLSEVKAQGFEKPTAIQSQGWPMALSGRDVVGIAETGSGKTLSYCLPAIVH 201
Query: 441 VLKATSSSTTQLVP---PIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFK 497
+ ++ L P PI VLIL PTRELA QI AE I+ I + GG K
Sbjct: 202 I-----NAQPLLAPGDGPI-VLILAPTRELAVQIQAE-ISKFGKSSRIRNTCVYGGVP-K 253
Query: 498 VDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVEN 557
Q R S ++ +ATPGRL+D +E +G + L + LVLDEAD +LD+GF +
Sbjct: 254 GPQIRDLSRGVEVCIATPGRLIDMLE--AGRT-NLRRVTYLVLDEADRMLDMGFEPQIRK 310
Query: 558 IVDCLPRRRQSLLFSATMPKEL-VLKRE--HTYIDTVGLGSVETPV--KIKQSC-LVAPH 611
I+ + RQ+ ++SAT PKE+ L + + YI V +GS++ +I Q +++
Sbjct: 311 IISQIRPDRQTCMWSATWPKEVRQLASDFLNNYIQ-VNIGSMDLSANHRITQIVEVISEF 369
Query: 612 ELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRD 671
E +++ HL E I+ K +VF T + + LR+ ++ K Q RD
Sbjct: 370 EKRDRMIKHL--EKIMENRGNKCLVFTGTKRIADEITRFLRQDGWPALSIHGDKQQQERD 427
Query: 672 RISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 717
+ EF+ K I+V +DV++RG+D D+T V+ P + E Y+H
Sbjct: 428 WVLNEFKTGKSPIMVATDVASRGIDVRDITHVINYDYPNNSEDYVH 473
>CGD|CAL0000864 [details] [associations]
symbol:DRS1 species:5476 "Candida albicans" [GO:0035690
"cellular response to drug" evidence=IMP] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0030687 "preribosome, large subunit precursor"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 CGD:CAL0000864 GO:GO:0005524
GO:GO:0005730 GO:GO:0042254 GO:GO:0003723 GO:GO:0035690
EMBL:AACQ01000032 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K13181 RefSeq:XP_719395.1 ProteinModelPortal:Q5ACK7
STRING:Q5ACK7 GeneID:3639045 KEGG:cal:CaO19.7635 Uniprot:Q5ACK7
Length = 613
Score = 403 (146.9 bits), Expect = 5.6e-35, P = 5.6e-35
Identities = 112/386 (29%), Positives = 198/386 (51%)
Query: 336 KSLEDEHDFEEQVELIR-KEISXXXXXXXXXXXXXXXXXPILSQKRFDECGISPLTIKAL 394
K E+E + EE+VE+ KE+ P + F +S +K +
Sbjct: 86 KQEEEEEEEEEEVEVPEVKEVVEPEDSAEAIADFYEESSPQQTHTSFQTLQLSRPVLKGI 145
Query: 395 TAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLVP 454
+ + T +Q A++ L GKD V A+TG+GK+ A+++P IE +L S+ST
Sbjct: 146 AELKFTKPTPIQSASIPIALLGKDIVAGAQTGSGKTGAYMIPIIERLLYKPSTSTK---- 201
Query: 455 PIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILVAT 514
V+IL PTRELA Q+ L + + + + VGG + + +L++ P I++AT
Sbjct: 202 ---VIILTPTRELALQVYEFGKKLSHHVNNLNIGLAVGGLNLRQQEEQLKTRP-DIVIAT 257
Query: 515 PGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPR-RRQSLLFSA 573
PGRL+DHI N SV+ +++LV+DEAD +L+ GF+ ++ I+ +P+ +RQ+LLFSA
Sbjct: 258 PGRLIDHIRNSPSFSVQ--DIQVLVIDEADRMLEEGFQDELTEILSLIPKHKRQTLLFSA 315
Query: 574 TMPKELVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHF--QILHHLLKEHILGTPD 631
TM + + + V + ++ P + L + Q+ LL + + G
Sbjct: 316 TMNTRIQDLIQLSLQKPVRI-MIDPPKSVASKLLQQFVRIRKRDQLKPALLYQLLKGVSS 374
Query: 632 YKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEFRASKRLILVTSDVS 691
+V+VF + L ++L + + V E++ Q R + + F++ + +L+ +D++
Sbjct: 375 -RVVVFVARKETAHRLRIVLGLLGLKVSELHGALTQEQRLQNVKNFKSLEVPVLICTDLA 433
Query: 692 ARGMDYPDVTSVVQVGIPPDREQYIH 717
ARG+D P + V+ +P E Y+H
Sbjct: 434 ARGLDIPKIELVINYDMPKTFEIYLH 459
>UNIPROTKB|Q5ACK7 [details] [associations]
symbol:DRS1 "ATP-dependent RNA helicase DRS1"
species:237561 "Candida albicans SC5314" [GO:0035690 "cellular
response to drug" evidence=IMP] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 CGD:CAL0000864
GO:GO:0005524 GO:GO:0005730 GO:GO:0042254 GO:GO:0003723
GO:GO:0035690 EMBL:AACQ01000032 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K13181 RefSeq:XP_719395.1
ProteinModelPortal:Q5ACK7 STRING:Q5ACK7 GeneID:3639045
KEGG:cal:CaO19.7635 Uniprot:Q5ACK7
Length = 613
Score = 403 (146.9 bits), Expect = 5.6e-35, P = 5.6e-35
Identities = 112/386 (29%), Positives = 198/386 (51%)
Query: 336 KSLEDEHDFEEQVELIR-KEISXXXXXXXXXXXXXXXXXPILSQKRFDECGISPLTIKAL 394
K E+E + EE+VE+ KE+ P + F +S +K +
Sbjct: 86 KQEEEEEEEEEEVEVPEVKEVVEPEDSAEAIADFYEESSPQQTHTSFQTLQLSRPVLKGI 145
Query: 395 TAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLVP 454
+ + T +Q A++ L GKD V A+TG+GK+ A+++P IE +L S+ST
Sbjct: 146 AELKFTKPTPIQSASIPIALLGKDIVAGAQTGSGKTGAYMIPIIERLLYKPSTSTK---- 201
Query: 455 PIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILVAT 514
V+IL PTRELA Q+ L + + + + VGG + + +L++ P I++AT
Sbjct: 202 ---VIILTPTRELALQVYEFGKKLSHHVNNLNIGLAVGGLNLRQQEEQLKTRP-DIVIAT 257
Query: 515 PGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPR-RRQSLLFSA 573
PGRL+DHI N SV+ +++LV+DEAD +L+ GF+ ++ I+ +P+ +RQ+LLFSA
Sbjct: 258 PGRLIDHIRNSPSFSVQ--DIQVLVIDEADRMLEEGFQDELTEILSLIPKHKRQTLLFSA 315
Query: 574 TMPKELVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHF--QILHHLLKEHILGTPD 631
TM + + + V + ++ P + L + Q+ LL + + G
Sbjct: 316 TMNTRIQDLIQLSLQKPVRI-MIDPPKSVASKLLQQFVRIRKRDQLKPALLYQLLKGVSS 374
Query: 632 YKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEFRASKRLILVTSDVS 691
+V+VF + L ++L + + V E++ Q R + + F++ + +L+ +D++
Sbjct: 375 -RVVVFVARKETAHRLRIVLGLLGLKVSELHGALTQEQRLQNVKNFKSLEVPVLICTDLA 433
Query: 692 ARGMDYPDVTSVVQVGIPPDREQYIH 717
ARG+D P + V+ +P E Y+H
Sbjct: 434 ARGLDIPKIELVINYDMPKTFEIYLH 459
>UNIPROTKB|Q5ZM36 [details] [associations]
symbol:EIF4A3 "Eukaryotic initiation factor 4A-III"
species:9031 "Gallus gallus" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0000184 "nuclear-transcribed mRNA
catabolic process, nonsense-mediated decay" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0006417 "regulation of translation" evidence=IEA] [GO:0008380
"RNA splicing" evidence=IEA] [GO:0051028 "mRNA transport"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0016607
"nuclear speck" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0006417 GO:GO:0000184 GO:GO:0008380 GO:GO:0016607
GO:GO:0006397 GO:GO:0003723 GO:GO:0051028 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 KO:K13025 CTD:9775
OrthoDB:EOG4229JV EMBL:AJ719548 IPI:IPI00588271
RefSeq:NP_001025820.1 UniGene:Gga.7844 ProteinModelPortal:Q5ZM36
SMR:Q5ZM36 PRIDE:Q5ZM36 GeneID:416704 KEGG:gga:416704
InParanoid:Q5ZM36 NextBio:20820126 Uniprot:Q5ZM36
Length = 412
Score = 386 (140.9 bits), Expect = 6.0e-35, P = 6.0e-35
Identities = 104/341 (30%), Positives = 177/341 (51%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
FD G+ ++ + A G+ + + +Q+ + ++G+D + ++++GTGK+ F + ++
Sbjct: 41 FDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQC 100
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+ TQ LIL PTRELA QI +AL ++ + +GGT D
Sbjct: 101 L--DIQVRETQ------ALILAPTRELAVQIQKGLLAL-GDYMNVQCHACIGGTNVGEDI 151
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
R+L+ ++ TPGR+ D I +S +R +KMLVLDEAD +L+ GF++ + ++
Sbjct: 152 RKLDYGQ-HVVAGTPGRVFDMIRRRS---LRTRAIKMLVLDEADEMLNKGFKEQIYDVYR 207
Query: 561 CLPRRRQSLLFSATMPKELVLKREHTYIDTVGL--GSVETPVK-IKQSCL-VAPHELHFQ 616
LP Q +L SAT+P E++ D + + E ++ IKQ + V E F
Sbjct: 208 YLPPATQVVLISATLPHEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAVEREEWKFD 267
Query: 617 ILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEE 676
L L + + T + ++FC+T L +RE V M+ PQ R+ I +E
Sbjct: 268 TLCDLY-DTLTIT---QAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKE 323
Query: 677 FRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 717
FR+ +L+++DV ARG+D P V+ ++ +P +RE YIH
Sbjct: 324 FRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRELYIH 364
>UNIPROTKB|Q2NL22 [details] [associations]
symbol:EIF4A3 "Eukaryotic initiation factor 4A-III"
species:9913 "Bos taurus" [GO:0016607 "nuclear speck" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0048026 "positive regulation of mRNA
splicing, via spliceosome" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0045727 "positive regulation of translation"
evidence=IEA] [GO:0035145 "exon-exon junction complex"
evidence=IEA] [GO:0017148 "negative regulation of translation"
evidence=IEA] [GO:0008143 "poly(A) RNA binding" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IEA]
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=IEA] [GO:0051028 "mRNA transport"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0006397
"mRNA processing" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005737 GO:GO:0000184
GO:GO:0008380 GO:GO:0017148 GO:GO:0016607 GO:GO:0006397
GO:GO:0045727 GO:GO:0051028 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0004004
GO:GO:0035145 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0008143 HOVERGEN:HBG107989
GeneTree:ENSGT00530000062880 KO:K13025 EMBL:BC111184
IPI:IPI00708766 RefSeq:NP_001039653.1 UniGene:Bt.3377
ProteinModelPortal:Q2NL22 SMR:Q2NL22 PRIDE:Q2NL22
Ensembl:ENSBTAT00000021327 GeneID:515145 KEGG:bta:515145 CTD:9775
InParanoid:Q2NL22 OMA:LALGDFM OrthoDB:EOG4229JV NextBio:20871682
Uniprot:Q2NL22
Length = 411
Score = 386 (140.9 bits), Expect = 6.0e-35, P = 6.0e-35
Identities = 104/341 (30%), Positives = 177/341 (51%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
FD G+ ++ + A G+ + + +Q+ + ++G+D + ++++GTGK+ F + ++
Sbjct: 40 FDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQC 99
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+ TQ LIL PTRELA QI +AL ++ + +GGT D
Sbjct: 100 L--DIQVRETQ------ALILAPTRELAVQIQKGLLAL-GDYMNVQCHACIGGTNVGEDI 150
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
R+L+ ++ TPGR+ D I +S +R +KMLVLDEAD +L+ GF++ + ++
Sbjct: 151 RKLDYGQ-HVVAGTPGRVFDMIRRRS---LRTRAIKMLVLDEADEMLNKGFKEQIYDVYR 206
Query: 561 CLPRRRQSLLFSATMPKELVLKREHTYIDTVGL--GSVETPVK-IKQSCL-VAPHELHFQ 616
LP Q +L SAT+P E++ D + + E ++ IKQ + V E F
Sbjct: 207 YLPPATQVVLISATLPHEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAVEREEWKFD 266
Query: 617 ILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEE 676
L L + + T + ++FC+T L +RE V M+ PQ R+ I +E
Sbjct: 267 TLCDLY-DTLTIT---QAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKE 322
Query: 677 FRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 717
FR+ +L+++DV ARG+D P V+ ++ +P +RE YIH
Sbjct: 323 FRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRELYIH 363
>UNIPROTKB|E2RDZ4 [details] [associations]
symbol:EIF4A3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0048026 "positive regulation of mRNA splicing,
via spliceosome" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045727 "positive regulation of translation" evidence=IEA]
[GO:0035145 "exon-exon junction complex" evidence=IEA] [GO:0017148
"negative regulation of translation" evidence=IEA] [GO:0008143
"poly(A) RNA binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IEA] [GO:0000184 "nuclear-transcribed mRNA catabolic
process, nonsense-mediated decay" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0000184 GO:GO:0017148 GO:GO:0045727 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
GO:GO:0035145 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0008143
GeneTree:ENSGT00530000062880 KO:K13025 OMA:EDWKFDT CTD:9775
EMBL:AAEX03006203 RefSeq:XP_533130.2 Ensembl:ENSCAFT00000009055
GeneID:475922 KEGG:cfa:475922 NextBio:20851666 Uniprot:E2RDZ4
Length = 411
Score = 386 (140.9 bits), Expect = 6.0e-35, P = 6.0e-35
Identities = 104/341 (30%), Positives = 177/341 (51%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
FD G+ ++ + A G+ + + +Q+ + ++G+D + ++++GTGK+ F + ++
Sbjct: 40 FDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQC 99
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+ TQ LIL PTRELA QI +AL ++ + +GGT D
Sbjct: 100 L--DIQVRETQ------ALILAPTRELAVQIQKGLLAL-GDYMNVQCHACIGGTNVGEDI 150
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
R+L+ ++ TPGR+ D I +S +R +KMLVLDEAD +L+ GF++ + ++
Sbjct: 151 RKLDYGQ-HVVAGTPGRVFDMIRRRS---LRTRAIKMLVLDEADEMLNKGFKEQIYDVYR 206
Query: 561 CLPRRRQSLLFSATMPKELVLKREHTYIDTVGL--GSVETPVK-IKQSCL-VAPHELHFQ 616
LP Q +L SAT+P E++ D + + E ++ IKQ + V E F
Sbjct: 207 YLPPATQVVLISATLPHEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAVEREEWKFD 266
Query: 617 ILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEE 676
L L + + T + ++FC+T L +RE V M+ PQ R+ I +E
Sbjct: 267 TLCDLY-DTLTIT---QAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKE 322
Query: 677 FRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 717
FR+ +L+++DV ARG+D P V+ ++ +P +RE YIH
Sbjct: 323 FRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRELYIH 363
>UNIPROTKB|P38919 [details] [associations]
symbol:EIF4A3 "Eukaryotic initiation factor 4A-III"
species:9606 "Homo sapiens" [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0051028 "mRNA transport" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0048026 "positive
regulation of mRNA splicing, via spliceosome" evidence=IEA]
[GO:0016607 "nuclear speck" evidence=IEA] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0045727 "positive regulation
of translation" evidence=IMP] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IC] [GO:0035145 "exon-exon junction complex"
evidence=IDA] [GO:0000184 "nuclear-transcribed mRNA catabolic
process, nonsense-mediated decay" evidence=IMP;TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=IDA] [GO:0005524 "ATP binding"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0008143
"poly(A) RNA binding" evidence=IDA] [GO:0017148 "negative
regulation of translation" evidence=IDA] [GO:0000288
"nuclear-transcribed mRNA catabolic process,
deadenylation-dependent decay" evidence=TAS] [GO:0000289
"nuclear-transcribed mRNA poly(A) tail shortening" evidence=TAS]
[GO:0005829 "cytosol" evidence=TAS] [GO:0010467 "gene expression"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0019221
"cytokine-mediated signaling pathway" evidence=TAS]
Reactome:REACT_71 Reactome:REACT_21257 InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005829
GO:GO:0005524 Reactome:REACT_6900 GO:GO:0000184 GO:GO:0017148
GO:GO:0016607 GO:GO:0019221 TCDB:3.A.18.1.1 EMBL:CH471099
GO:GO:0045727 GO:GO:0051028 GO:GO:0000398 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0004004 GO:GO:0000289 EMBL:AC087741 GO:GO:0035145 PDB:2HYI
PDB:2J0Q PDB:2J0S PDB:2J0U PDB:2XB2 PDB:3EX7 PDBsum:2HYI
PDBsum:2J0Q PDBsum:2J0S PDBsum:2J0U PDBsum:2XB2 PDBsum:3EX7
eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0008143 HOVERGEN:HBG107989 KO:K13025
OMA:EDWKFDT CTD:9775 OrthoDB:EOG4229JV EMBL:X79538 EMBL:D21853
EMBL:AK290608 EMBL:CR456750 EMBL:BC003662 EMBL:BC004386
EMBL:BC011151 IPI:IPI00009328 PIR:S45142 RefSeq:NP_055555.1
UniGene:Hs.389649 PDB:2HXY PDBsum:2HXY ProteinModelPortal:P38919
SMR:P38919 DIP:DIP-33218N IntAct:P38919 MINT:MINT-1460615
STRING:P38919 PhosphoSite:P38919 DMDM:20532400
REPRODUCTION-2DPAGE:IPI00009328 PaxDb:P38919 PeptideAtlas:P38919
PRIDE:P38919 DNASU:9775 Ensembl:ENST00000269349 GeneID:9775
KEGG:hsa:9775 UCSC:uc002jxs.3 GeneCards:GC17M078109 HGNC:HGNC:18683
HPA:HPA021878 MIM:608546 neXtProt:NX_P38919 PharmGKB:PA162384945
InParanoid:P38919 PhylomeDB:P38919 ChiTaRS:EIF4A3
EvolutionaryTrace:P38919 GenomeRNAi:9775 NextBio:36802 Bgee:P38919
CleanEx:HS_EIF4A3 Genevestigator:P38919 GermOnline:ENSG00000141543
Uniprot:P38919
Length = 411
Score = 386 (140.9 bits), Expect = 6.0e-35, P = 6.0e-35
Identities = 104/341 (30%), Positives = 177/341 (51%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
FD G+ ++ + A G+ + + +Q+ + ++G+D + ++++GTGK+ F + ++
Sbjct: 40 FDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQC 99
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+ TQ LIL PTRELA QI +AL ++ + +GGT D
Sbjct: 100 L--DIQVRETQ------ALILAPTRELAVQIQKGLLAL-GDYMNVQCHACIGGTNVGEDI 150
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
R+L+ ++ TPGR+ D I +S +R +KMLVLDEAD +L+ GF++ + ++
Sbjct: 151 RKLDYGQ-HVVAGTPGRVFDMIRRRS---LRTRAIKMLVLDEADEMLNKGFKEQIYDVYR 206
Query: 561 CLPRRRQSLLFSATMPKELVLKREHTYIDTVGL--GSVETPVK-IKQSCL-VAPHELHFQ 616
LP Q +L SAT+P E++ D + + E ++ IKQ + V E F
Sbjct: 207 YLPPATQVVLISATLPHEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAVEREEWKFD 266
Query: 617 ILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEE 676
L L + + T + ++FC+T L +RE V M+ PQ R+ I +E
Sbjct: 267 TLCDLY-DTLTIT---QAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKE 322
Query: 677 FRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 717
FR+ +L+++DV ARG+D P V+ ++ +P +RE YIH
Sbjct: 323 FRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRELYIH 363
>UNIPROTKB|A6M931 [details] [associations]
symbol:EIF4A3 "Eukaryotic initiation factor 4A-III"
species:9823 "Sus scrofa" [GO:0016607 "nuclear speck" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0051028 "mRNA transport"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0006417
"regulation of translation" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0000184 "nuclear-transcribed mRNA catabolic
process, nonsense-mediated decay" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0006417 GO:GO:0000184 GO:GO:0008380
GO:GO:0016607 GO:GO:0006397 GO:GO:0005681 GO:GO:0003723
GO:GO:0051028 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 KO:K13025 CTD:9775
OrthoDB:EOG4229JV EMBL:DQ351286 RefSeq:NP_001093663.1
UniGene:Ssc.869 ProteinModelPortal:A6M931 SMR:A6M931 PRIDE:A6M931
GeneID:100101926 KEGG:ssc:100101926 Uniprot:A6M931
Length = 411
Score = 386 (140.9 bits), Expect = 6.0e-35, P = 6.0e-35
Identities = 104/341 (30%), Positives = 177/341 (51%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
FD G+ ++ + A G+ + + +Q+ + ++G+D + ++++GTGK+ F + ++
Sbjct: 40 FDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQC 99
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+ TQ LIL PTRELA QI +AL ++ + +GGT D
Sbjct: 100 L--DIQVRETQ------ALILAPTRELAVQIQKGLLAL-GDYMNVQCHACIGGTNVGEDI 150
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
R+L+ ++ TPGR+ D I +S +R +KMLVLDEAD +L+ GF++ + ++
Sbjct: 151 RKLDYGQ-HVVAGTPGRVFDMIRRRS---LRTRAIKMLVLDEADEMLNKGFKEQIYDVYR 206
Query: 561 CLPRRRQSLLFSATMPKELVLKREHTYIDTVGL--GSVETPVK-IKQSCL-VAPHELHFQ 616
LP Q +L SAT+P E++ D + + E ++ IKQ + V E F
Sbjct: 207 YLPPATQVVLISATLPHEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAVEREEWKFD 266
Query: 617 ILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEE 676
L L + + T + ++FC+T L +RE V M+ PQ R+ I +E
Sbjct: 267 TLCDLY-DTLTIT---QAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKE 322
Query: 677 FRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 717
FR+ +L+++DV ARG+D P V+ ++ +P +RE YIH
Sbjct: 323 FRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRELYIH 363
>UNIPROTKB|Q9KU63 [details] [associations]
symbol:VC_0660 "ATP-dependent RNA helicase SrmB"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0016070 "RNA metabolic process" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0003676 GO:GO:0016070 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 InterPro:IPR014014 PROSITE:PS51195
HSSP:P10081 OMA:PLAMDQR KO:K05590 ProtClustDB:PRK11192 PIR:F82295
RefSeq:NP_230309.1 ProteinModelPortal:Q9KU63 DNASU:2615450
GeneID:2615450 KEGG:vch:VC0660 PATRIC:20080435 Uniprot:Q9KU63
Length = 423
Score = 386 (140.9 bits), Expect = 6.0e-35, P = 6.0e-35
Identities = 108/342 (31%), Positives = 179/342 (52%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
K F + + P+ ++A+ G+ + T+VQ + L+G+D + A TGTGK+ AF++PA+
Sbjct: 3 KTFADLELDPILLEAIEEMGFSRPTQVQAEAIPQALDGRDVLASAPTGTGKTAAFVIPAL 62
Query: 439 EAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
+ +L + P +LIL PTRELA Q+A +A AL KN + + T+ GG +++
Sbjct: 63 QYLL----DFPRRKAGPARILILTPTRELAMQVAEQAQALAKN-TRLNIFTITGGVQYQ- 116
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
+ + + I+VATPGRLL++I+ + R ++ L+LDEAD +LD+GF V+ +
Sbjct: 117 EHADILATTQDIVVATPGRLLEYIDAER-FDCR--AIEWLILDEADRMLDMGFGPTVDRL 173
Query: 559 -VDCLPRRRQSLLFSATMPKELVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQI 617
+C R+Q+LLFSAT+ V + E P + ++ H +
Sbjct: 174 STECR-WRKQTLLFSATLEGRGVEGFTADLLKDPAHVDAEPPRRERKKISQWYHRAD-DM 231
Query: 618 LH--HLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISE 675
H LLK+ IL + IVF T + L L + ++ + PQ R+
Sbjct: 232 PHKVELLKK-ILTEQAERSIVFLKTRERLADLRAELEKAQIPCAWIQGEMPQDRRNNAIS 290
Query: 676 EFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 717
FR IL+ +DV+ARG+D PD++ V+ +P + Y+H
Sbjct: 291 RFREGDVNILLATDVAARGIDVPDISHVINFDLPRSADVYLH 332
>TIGR_CMR|VC_0660 [details] [associations]
symbol:VC_0660 "ATP-dependent RNA helicase SrmB"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0003676 GO:GO:0016070
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 OMA:PLAMDQR
KO:K05590 ProtClustDB:PRK11192 PIR:F82295 RefSeq:NP_230309.1
ProteinModelPortal:Q9KU63 DNASU:2615450 GeneID:2615450
KEGG:vch:VC0660 PATRIC:20080435 Uniprot:Q9KU63
Length = 423
Score = 386 (140.9 bits), Expect = 6.0e-35, P = 6.0e-35
Identities = 108/342 (31%), Positives = 179/342 (52%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
K F + + P+ ++A+ G+ + T+VQ + L+G+D + A TGTGK+ AF++PA+
Sbjct: 3 KTFADLELDPILLEAIEEMGFSRPTQVQAEAIPQALDGRDVLASAPTGTGKTAAFVIPAL 62
Query: 439 EAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
+ +L + P +LIL PTRELA Q+A +A AL KN + + T+ GG +++
Sbjct: 63 QYLL----DFPRRKAGPARILILTPTRELAMQVAEQAQALAKN-TRLNIFTITGGVQYQ- 116
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
+ + + I+VATPGRLL++I+ + R ++ L+LDEAD +LD+GF V+ +
Sbjct: 117 EHADILATTQDIVVATPGRLLEYIDAER-FDCR--AIEWLILDEADRMLDMGFGPTVDRL 173
Query: 559 -VDCLPRRRQSLLFSATMPKELVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQI 617
+C R+Q+LLFSAT+ V + E P + ++ H +
Sbjct: 174 STECR-WRKQTLLFSATLEGRGVEGFTADLLKDPAHVDAEPPRRERKKISQWYHRAD-DM 231
Query: 618 LH--HLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISE 675
H LLK+ IL + IVF T + L L + ++ + PQ R+
Sbjct: 232 PHKVELLKK-ILTEQAERSIVFLKTRERLADLRAELEKAQIPCAWIQGEMPQDRRNNAIS 290
Query: 676 EFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 717
FR IL+ +DV+ARG+D PD++ V+ +P + Y+H
Sbjct: 291 RFREGDVNILLATDVAARGIDVPDISHVINFDLPRSADVYLH 332
>RGD|1591139 [details] [associations]
symbol:Eif4a3 "eukaryotic translation initiation factor 4A,
isoform 3" species:10116 "Rattus norvegicus" [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008143 "poly(A) RNA binding" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0016607 "nuclear speck" evidence=IEA]
[GO:0017148 "negative regulation of translation" evidence=IEA]
[GO:0035145 "exon-exon junction complex" evidence=IEA] [GO:0045727
"positive regulation of translation" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0048026 "positive regulation of mRNA
splicing, via spliceosome" evidence=IEA] [GO:0051028 "mRNA
transport" evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 RGD:1591139 GO:GO:0005524
GO:GO:0005737 GO:GO:0006417 GO:GO:0000184 GO:GO:0008380
GO:GO:0016607 GO:GO:0006397 GO:GO:0005681 GO:GO:0003723
EMBL:CH473948 GO:GO:0051028 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HSSP:P60842 KO:K13025 CTD:9775 EMBL:BC105875
IPI:IPI00656385 RefSeq:NP_001093628.1 UniGene:Rn.202617
ProteinModelPortal:Q3B8Q2 SMR:Q3B8Q2 PRIDE:Q3B8Q2 GeneID:688288
KEGG:rno:688288 NextBio:736113 Genevestigator:Q3B8Q2 Uniprot:Q3B8Q2
Length = 411
Score = 386 (140.9 bits), Expect = 6.0e-35, P = 6.0e-35
Identities = 104/341 (30%), Positives = 177/341 (51%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
FD G+ ++ + A G+ + + +Q+ + ++G+D + ++++GTGK+ F + ++
Sbjct: 40 FDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQC 99
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+ TQ LIL PTRELA QI +AL ++ + +GGT D
Sbjct: 100 L--DIQVRETQ------ALILAPTRELAVQIQKGLLAL-GDYMNVQCHACIGGTNVGEDI 150
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
R+L+ ++ TPGR+ D I +S +R +KMLVLDEAD +L+ GF++ + ++
Sbjct: 151 RKLDYGQ-HVVAGTPGRVFDMIRRRS---LRTRAIKMLVLDEADEMLNKGFKEQIYDVYR 206
Query: 561 CLPRRRQSLLFSATMPKELVLKREHTYIDTVGL--GSVETPVK-IKQSCL-VAPHELHFQ 616
LP Q +L SAT+P E++ D + + E ++ IKQ + V E F
Sbjct: 207 YLPPATQVVLISATLPHEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAVEREEWKFD 266
Query: 617 ILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEE 676
L L + + T + ++FC+T L +RE V M+ PQ R+ I +E
Sbjct: 267 TLCDLY-DTLTIT---QAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKE 322
Query: 677 FRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 717
FR+ +L+++DV ARG+D P V+ ++ +P +RE YIH
Sbjct: 323 FRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRELYIH 363
>UNIPROTKB|Q3MSQ8 [details] [associations]
symbol:ddx4 "Probable ATP-dependent RNA helicase DDX4"
species:45623 "Pelophylax lessonae" [GO:0071546 "pi-body"
evidence=ISS] [GO:0071547 "piP-body" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0007275 GO:GO:0005524 GO:GO:0005634
GO:GO:0030154 GO:GO:0048477 GO:GO:0007283 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0071546
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 HSSP:P09052
HOVERGEN:HBG015893 GO:GO:0071547 EMBL:AJ841700
ProteinModelPortal:Q3MSQ8 SMR:Q3MSQ8 Uniprot:Q3MSQ8
Length = 724
Score = 399 (145.5 bits), Expect = 7.0e-35, Sum P(2) = 7.0e-35
Identities = 108/346 (31%), Positives = 186/346 (53%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI-E 439
F+E + K + +GY+++T +Q+ ++ + G+D + A+TG+GK+ AFLLP +
Sbjct: 288 FEEANLCDSLAKNVCKSGYVKLTPIQKHSIPIIVAGRDLMACAQTGSGKTAAFLLPILAH 347
Query: 440 AVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVD 499
++K SS Q + +I+ PTREL +QI +A + + + GGT+
Sbjct: 348 LMVKGVESSAFQTLKEPEAIIVAPTRELINQIYLDA-RKFSYGTCVRPVVIYGGTQMFHS 406
Query: 500 QRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIV 559
+++ S+ C IL ATPGRLLD I + + L L+ LVLDEAD +LD+GFR+D+EN++
Sbjct: 407 LKQI-SEGCNILCATPGRLLDVIRKEK---IGLTKLRYLVLDEADRMLDMGFREDIENLL 462
Query: 560 DC--LPRR--RQSLLFSATMPKELV-LKREHTYIDT--VGLGSVETPVKIKQSCLVAPHE 612
+P + RQ+L+FSAT P + L RE D V +G V + ++ E
Sbjct: 463 KSSGMPSKEERQTLMFSATFPSSIQSLAREILKPDYLFVVVGQVGGACSDVEQMVIEVDE 522
Query: 613 LHFQI-LHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRD 671
+ L +L+E +G+ + +VF T + L + K+ ++ + Q R+
Sbjct: 523 FGKKDKLMEILQE--IGSE--RTMVFVKTKKKADFIATFLCQEKVPSTSIHGDREQKERE 578
Query: 672 RISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 717
+FR + ++V + V+ARG+D +V+ V+ IP D ++Y+H
Sbjct: 579 TALRDFRTGQCPVIVATSVAARGLDIENVSYVINFDIPDDIDEYVH 624
Score = 52 (23.4 bits), Expect = 7.0e-35, Sum P(2) = 7.0e-35
Identities = 23/87 (26%), Positives = 32/87 (36%)
Query: 202 NDGETVIPSRNVMDFVRRAYFSG-TDKRNFCRNDGSSTRDKAGFDTGNKAKPFARNLG-N 259
+D T+ +R F RR F+ T R G ++ G + GN+ F N G N
Sbjct: 120 DDNRTIDDNRRRGGFQRRGGFNDETSGRGRRGVRGGTSFSGFGREDGNEQSGFTSNDGFN 179
Query: 260 NRENGDSKNMSEFMKKKCFVGKRRFKR 286
N +G F G R R
Sbjct: 180 NETSGFGSGRRGSRGDSSFSGDRESDR 206
Score = 42 (19.8 bits), Expect = 7.8e-34, Sum P(2) = 7.8e-34
Identities = 10/37 (27%), Positives = 16/37 (43%)
Query: 228 RNFCRNDGSSTRDKAGFDTGNKAKPFARNLGNNRENG 264
+NF ++ + +AG D + R GN R G
Sbjct: 61 QNFEFSERGFGKQRAGSDANQNFESSERGFGNRRGKG 97
>TIGR_CMR|CPS_1125 [details] [associations]
symbol:CPS_1125 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 KO:K11927 RefSeq:YP_267868.1
ProteinModelPortal:Q486Z7 STRING:Q486Z7 GeneID:3520292
KEGG:cps:CPS_1125 PATRIC:21465509 OMA:AYSKYLR
BioCyc:CPSY167879:GI48-1206-MONOMER Uniprot:Q486Z7
Length = 466
Score = 385 (140.6 bits), Expect = 7.7e-35, P = 7.7e-35
Identities = 105/342 (30%), Positives = 177/342 (51%)
Query: 380 RFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIE 439
+F + G+S +KA+ GY + +Q + A + G+D + A+TGTGK+ F LP ++
Sbjct: 7 KFTDLGLSEALLKAVRDKGYETPSPIQAQAIPAVISGRDVMAAAQTGTGKTAGFTLPLLQ 66
Query: 440 AVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVD 499
+ + + + + LIL PTRELA+QI+ E+I + + + + + GG +
Sbjct: 67 RLSSSKGNKVSS--NNVRALILTPTRELAAQIS-ESIEVYGKYLNLHSMVVFGGVKINPQ 123
Query: 500 QRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIV 559
RL +LVATPGRLLD + N+ +V+ L++ +LDEAD +LD+GF +D++ ++
Sbjct: 124 IARLRQG-VDVLVATPGRLLD-LYNQR--AVKFSQLEVFILDEADRMLDMGFIRDIKKLM 179
Query: 560 DCLPRRRQSLLFSATMPKELVLKREHTYIDTVGLGSVE----TPVKIKQSCLVAPHELHF 615
LP+ RQ+LLFSAT E+ + + + + SV+ T K+ Q +
Sbjct: 180 TALPKDRQNLLFSATFSPEIRALAKGMVNNPLEI-SVDAENSTAEKVTQWLTAVDKKRKP 238
Query: 616 QILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISE 675
+L HL+KE+ +V+VF T + L L + ++ K Q R +
Sbjct: 239 AVLTHLIKENNW----QQVLVFTKTKHGANKLTKHLEAEGLTAAAIHGNKSQGARTKALA 294
Query: 676 EFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 717
F+ ILV +D++ARG+D + VV +P E Y+H
Sbjct: 295 AFKDGSVKILVATDIAARGIDIDLLPQVVNFDLPNVPEDYVH 336
>SGD|S000003931 [details] [associations]
symbol:DRS1 "Nucleolar DEAD-box protein required for ribosome
assembly and function" species:4932 "Saccharomyces cerevisiae"
[GO:0000027 "ribosomal large subunit assembly" evidence=TAS]
[GO:0005730 "nucleolus" evidence=IEA;IDA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0042254
"ribosome biogenesis" evidence=IEA] [GO:0030687 "preribosome, large
subunit precursor" evidence=IDA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=TAS]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=TAS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 SGD:S000003931 GO:GO:0005524 GO:GO:0005730
EMBL:BK006945 GO:GO:0003723 GO:GO:0030687 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 EMBL:X91488
GO:GO:0004004 GO:GO:0000027 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00550000074997 HOGENOM:HOG000265456
KO:K13181 OrthoDB:EOG4B01XM EMBL:L00683 EMBL:Z73113 PIR:S64750
RefSeq:NP_013093.1 ProteinModelPortal:P32892 SMR:P32892
DIP:DIP-6471N IntAct:P32892 MINT:MINT-648259 STRING:P32892
PaxDb:P32892 PeptideAtlas:P32892 EnsemblFungi:YLL008W GeneID:850652
KEGG:sce:YLL008W CYGD:YLL008w OMA:RIRKRDH NextBio:966605
Genevestigator:P32892 GermOnline:YLL008W Uniprot:P32892
Length = 752
Score = 406 (148.0 bits), Expect = 8.0e-35, P = 8.0e-35
Identities = 110/350 (31%), Positives = 192/350 (54%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
+ F+ +S +K L + GY++ + +Q AT+ L GKD + A TG+GK+ AF++P I
Sbjct: 231 ENFNSLSLSRPVLKGLASLGYVKPSPIQSATIPIALLGKDIIAGAVTGSGKTAAFMIPII 290
Query: 439 EAVL-KATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFK 497
E +L K ++T+ V++L PTRELA Q+A + + GI VGG +
Sbjct: 291 ERLLYKPAKIASTR------VIVLLPTRELAIQVADVGKQIARFVSGITFGLAVGGLNLR 344
Query: 498 VDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVEN 557
++ L+S P I++ATPGR +DHI N + +V +++LV+DEAD +L+ GF+ ++
Sbjct: 345 QQEQMLKSRP-DIVIATPGRFIDHIRNSASFNVD--SVEILVMDEADRMLEEGFQDELNE 401
Query: 558 IVDCLPRRRQSLLFSATMP---KELV---LKRE-HTYIDTVGLGSVETPVKIKQSCLVAP 610
I+ LP RQ+LLFSATM K LV LK+ ID + K+ Q +
Sbjct: 402 IMGLLPSNRQNLLFSATMNSKIKSLVSLSLKKPVRIMIDP----PKKAATKLTQEFVRIR 457
Query: 611 HELHFQ--ILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQL 668
H + +L +L+++ + T +++VF + L +++ + M+V E++ Q
Sbjct: 458 KRDHLKPALLFNLIRK-LDPTGQKRIVVFVARKETAHRLRIIMGLLGMSVGELHGSLTQE 516
Query: 669 YR-DRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 717
R D +++ F+ + +L+ +D+++RG+D P + V+ +P E Y+H
Sbjct: 517 QRLDSVNK-FKNLEVPVLICTDLASRGLDIPKIEVVINYDMPKSYEIYLH 565
>DICTYBASE|DDB_G0291804 [details] [associations]
symbol:ddx6 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
dictyBase:DDB_G0291804 GO:GO:0005524 GO:GO:0005737
GenomeReviews:CM000155_GR GO:GO:0006397 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 KO:K12614 InterPro:IPR014014 PROSITE:PS51195
EMBL:AAFI02000185 RefSeq:XP_629938.1 HSSP:P39517
ProteinModelPortal:Q54E49 SMR:Q54E49 PRIDE:Q54E49
EnsemblProtists:DDB0234196 GeneID:8628344 KEGG:ddi:DDB_G0291804
OMA:QFMEKHL ProtClustDB:CLSZ2429504 Uniprot:Q54E49
Length = 423
Score = 384 (140.2 bits), Expect = 9.9e-35, P = 9.9e-35
Identities = 108/339 (31%), Positives = 173/339 (51%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
FD+ + ++ + GY++ + +QE + L G+D + +AK GTGK+ +FL+PA+E
Sbjct: 51 FDDLHLKRDLLRGIFEKGYVKPSPIQEKAIPIALAGRDIMARAKNGTGKTASFLIPALE- 109
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+ T+ V I VLIL PTRELA Q ++ L + + V+ GGT K D
Sbjct: 110 -----KTDPTKDV--IQVLILVPTRELALQ-TSQVCKELGKYMNVQVMASTGGTSLKDDI 161
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
RL + P ILVATPGR+LD + K+ L +++DEAD LL F+ VE +++
Sbjct: 162 MRLYN-PVHILVATPGRVLD-LAQKN--VANLSNCHTMIMDEADKLLSQEFQPLVEQLIN 217
Query: 561 CLPRRRQSLLFSATMPKELVLKREHTYIDTVGLGSVE--TPVKIKQSCLVAPHELHFQIL 618
LP++RQ LLFSAT P + +EH + +E T + Q L
Sbjct: 218 FLPQQRQILLFSATFPVTVKSFKEHYLQQAFEINLMEELTLKGVTQYYAFVEERQKIHCL 277
Query: 619 HHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEFR 678
+ L + + + I+FC++ LL + E+ + ++++ Q +R+R+ +FR
Sbjct: 278 NTLFSKLQIN----QSIIFCNSVNRVELLAKKITELGYSCFFIHAKMVQAHRNRVFHDFR 333
Query: 679 ASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 717
LV+SD+ RG+D DV V+ P E Y+H
Sbjct: 334 NGACRNLVSSDLFTRGIDIQDVNVVINFDFPKHSETYLH 372
>FB|FBgn0037573 [details] [associations]
symbol:eIF4AIII "eIF4AIII" species:7227 "Drosophila
melanogaster" [GO:0016281 "eukaryotic translation initiation factor
4F complex" evidence=ISS] [GO:0003743 "translation initiation
factor activity" evidence=ISS] [GO:0006413 "translational
initiation" evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0045495 "pole plasm" evidence=IDA] [GO:0045451 "pole plasm
oskar mRNA localization" evidence=IGI] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0071011 "precatalytic spliceosome" evidence=IDA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC] [GO:0006974 "response to
DNA damage stimulus" evidence=IMP] [GO:0008380 "RNA splicing"
evidence=IMP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0016281
GO:GO:0006974 GO:GO:0003743 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 GO:GO:0045451 GO:GO:0045495 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 ChiTaRS:EIF4A3
EMBL:AY089635 ProteinModelPortal:Q8SXH3 SMR:Q8SXH3 IntAct:Q8SXH3
STRING:Q8SXH3 PaxDb:Q8SXH3 PRIDE:Q8SXH3 FlyBase:FBgn0037573
InParanoid:Q8SXH3 OrthoDB:EOG4XWDD6 Bgee:Q8SXH3 Uniprot:Q8SXH3
Length = 399
Score = 384 (140.2 bits), Expect = 9.9e-35, P = 9.9e-35
Identities = 107/341 (31%), Positives = 180/341 (52%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F+ + ++ + A G+ + + +Q+ +++ ++G+D + +A++GTGK+ F + +++
Sbjct: 28 FNAMNLKEELLRGIYAYGFEKPSAIQQRSITPIVKGRDVIAQAQSGTGKTATFSISILQS 87
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+ T+ TQ VL L PTRELA QI + I L + + +GGT D
Sbjct: 88 L--DTTLRETQ------VLCLSPTRELAVQIQ-KVILALGDMMNVQCHVCIGGTNLGEDI 138
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
R+L+ I+ TPGR+ D I+ + +R +KMLVLDEAD +L+ GF++ + ++
Sbjct: 139 RKLDYGQ-HIVSGTPGRVFDMIKRRV---LRTRAIKMLVLDEADEMLNKGFKEQIYDVYR 194
Query: 561 CLPRRRQSLLFSATMPKELVLKREHTYIDTVGL--GSVETPVK-IKQSCL-VAPHELHFQ 616
LP Q +L SAT+P E++ D + + E ++ IKQ + V E F
Sbjct: 195 YLPPATQVVLISATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFFVAVEREEWKFD 254
Query: 617 ILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEE 676
L L + + T + ++FC+T L +RE V M+ PQ RD I +E
Sbjct: 255 TLCDLY-DTLTIT---QAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERDEIMKE 310
Query: 677 FRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 717
FRA + +L+T+DV ARG+D V+ V+ +P +RE YIH
Sbjct: 311 FRAGQSRVLITTDVWARGIDVQQVSLVINYDLPNNRELYIH 351
>UNIPROTKB|Q8EE19 [details] [associations]
symbol:SO_2571 "ATP-dependent RNA helicase DEAD box family"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 OMA:FRNLCAI
HOGENOM:HOG000268807 RefSeq:NP_718157.1 ProteinModelPortal:Q8EE19
GeneID:1170275 KEGG:son:SO_2571 PATRIC:23524769
ProtClustDB:CLSK906777 Uniprot:Q8EE19
Length = 475
Score = 384 (140.2 bits), Expect = 9.9e-35, P = 9.9e-35
Identities = 101/340 (29%), Positives = 173/340 (50%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F + G+ +KA+T GY T +Q + + L GK+ + A+TGTGK+ +F+LP +
Sbjct: 3 FSQLGLHSALVKAVTELGYQSPTPIQTQAIPSILAGKNVLAAAQTGTGKTASFVLPLLHR 62
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
A + + +IL PTRELA Q+ + I + + + + GG +
Sbjct: 63 FADAPKIRPKR----VRSIILTPTRELALQVE-QNINQYAKYLPLTAMAMYGGVDAAPQK 117
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
+RL + +LVATPGRLLD ++ +R + +LVLDEAD +LD+GF +D+ NI++
Sbjct: 118 KRL-IEGVDLLVATPGRLLDMYTQRA---IRFDEVSVLVLDEADRMLDMGFIEDINNIIE 173
Query: 561 CLPRRRQSLLFSATMPKELVLKREHTYIDTVGLGSVE---TPVKIKQSCLVAPHELHFQI 617
LP +RQ+LLFSAT+ K++ + D + + +I Q + +
Sbjct: 174 KLPEQRQNLLFSATLSKQVKALAKTAIPDAIEIEISRKNAASTQIDQWLTTVDKDRKSAL 233
Query: 618 LHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEF 677
L HL+KE+ + ++F T + L L + + +S + Q R+++ +F
Sbjct: 234 LSHLIKENNWA----QALIFIQTKHGAAKLVSQLEKRGIVAEAFHSGRSQAIREQLLIDF 289
Query: 678 RASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 717
+A K LV + V +RG+D + V+ +P + + YIH
Sbjct: 290 KAGKVPFLVATGVVSRGIDIDALERVINYDLPDEADDYIH 329
>TIGR_CMR|SO_2571 [details] [associations]
symbol:SO_2571 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 OMA:FRNLCAI
HOGENOM:HOG000268807 RefSeq:NP_718157.1 ProteinModelPortal:Q8EE19
GeneID:1170275 KEGG:son:SO_2571 PATRIC:23524769
ProtClustDB:CLSK906777 Uniprot:Q8EE19
Length = 475
Score = 384 (140.2 bits), Expect = 9.9e-35, P = 9.9e-35
Identities = 101/340 (29%), Positives = 173/340 (50%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F + G+ +KA+T GY T +Q + + L GK+ + A+TGTGK+ +F+LP +
Sbjct: 3 FSQLGLHSALVKAVTELGYQSPTPIQTQAIPSILAGKNVLAAAQTGTGKTASFVLPLLHR 62
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
A + + +IL PTRELA Q+ + I + + + + GG +
Sbjct: 63 FADAPKIRPKR----VRSIILTPTRELALQVE-QNINQYAKYLPLTAMAMYGGVDAAPQK 117
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
+RL + +LVATPGRLLD ++ +R + +LVLDEAD +LD+GF +D+ NI++
Sbjct: 118 KRL-IEGVDLLVATPGRLLDMYTQRA---IRFDEVSVLVLDEADRMLDMGFIEDINNIIE 173
Query: 561 CLPRRRQSLLFSATMPKELVLKREHTYIDTVGLGSVE---TPVKIKQSCLVAPHELHFQI 617
LP +RQ+LLFSAT+ K++ + D + + +I Q + +
Sbjct: 174 KLPEQRQNLLFSATLSKQVKALAKTAIPDAIEIEISRKNAASTQIDQWLTTVDKDRKSAL 233
Query: 618 LHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEF 677
L HL+KE+ + ++F T + L L + + +S + Q R+++ +F
Sbjct: 234 LSHLIKENNWA----QALIFIQTKHGAAKLVSQLEKRGIVAEAFHSGRSQAIREQLLIDF 289
Query: 678 RASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 717
+A K LV + V +RG+D + V+ +P + + YIH
Sbjct: 290 KAGKVPFLVATGVVSRGIDIDALERVINYDLPDEADDYIH 329
>DICTYBASE|DDB_G0280147 [details] [associations]
symbol:ddx47 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 dictyBase:DDB_G0280147 GO:GO:0005524
GO:GO:0005730 GenomeReviews:CM000152_GR GO:GO:0003723
EMBL:AAFI02000035 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HSSP:Q5STU4 KO:K14777 OMA:IFIPSKF
RefSeq:XP_641271.1 ProteinModelPortal:Q54VT4 SMR:Q54VT4
EnsemblProtists:DDB0234204 GeneID:8622403 KEGG:ddi:DDB_G0280147
Uniprot:Q54VT4
Length = 546
Score = 388 (141.6 bits), Expect = 1.6e-34, Sum P(2) = 1.6e-34
Identities = 99/340 (29%), Positives = 174/340 (51%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F+ G+ P I A G+ + +Q ++ L+G+D + A+TG+GK+ AF++P ++
Sbjct: 121 FESLGVHPQIIDACNKLGFNKPKEIQRESIPWALKGRDIIGLAQTGSGKTAAFVIPVLQK 180
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+L+A ++ L L PTRELA QIA + A+ + G+ LVGG
Sbjct: 181 LLEAPQG--------LFCLALAPTRELAYQIADQFNAI-GSTIGVKTCVLVGGIDSMSQS 231
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
L P ++V +PGR+L H+E+ G ++R +K ++DEAD L F ++V NI+
Sbjct: 232 LALAKKP-HVVVGSPGRVLHHLEHTKGFNLR--SIKYFIMDEADRLFSADFEEEVNNILK 288
Query: 561 CLPRRRQSLLFSATMPKELVLKREHTYIDTVGL---GSVETPVKIKQSCLVAPHELHFQI 617
+P+ R + LFSATM ++ + + ++ V + +T + Q L P +
Sbjct: 289 VIPKERNTYLFSATMTSKVAKLQRASLVNPVKVQVASKYQTVDTLLQQYLFVPFKYKDCY 348
Query: 618 LHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEF 677
L ++L E + G I+F ST ++ + ++LR + + Q R +F
Sbjct: 349 LAYILNE-LAGN---LTIIFTSTCASSTKIAMMLRNLGFGAIPINGDMDQGKRLASLNKF 404
Query: 678 RASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 717
+ + ILV +DV+ARG+D P V V+ +P + ++Y+H
Sbjct: 405 KQGTKSILVATDVAARGLDIPSVDLVINYDVPTNSKEYVH 444
Score = 42 (19.8 bits), Expect = 1.6e-34, Sum P(2) = 1.6e-34
Identities = 11/36 (30%), Positives = 23/36 (63%)
Query: 320 ASLGKYDMKITKRVPLKSLEDEHDFEEQVELIRKEI 355
++L + +I K+V +K E++ EE+ E +++EI
Sbjct: 35 STLTEKPKQIVKKV-IKKQEEKEVKEEEEEEVKEEI 69
>WB|WBGene00002083 [details] [associations]
symbol:inf-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0019915 "lipid storage" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0008340 GO:GO:0009792
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0040011
GO:GO:0000003 GO:GO:0019915 GO:GO:0003743 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:FO081266 GO:GO:0008026
eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00530000062880 KO:K03257 OMA:TENDARQ
EMBL:Z12116 PIR:S26281 RefSeq:NP_001022623.1 RefSeq:NP_001022624.1
UniGene:Cel.6803 ProteinModelPortal:P27639 SMR:P27639
DIP:DIP-27102N IntAct:P27639 MINT:MINT-1112147 STRING:P27639
PaxDb:P27639 PRIDE:P27639 EnsemblMetazoa:F57B9.6a.1
EnsemblMetazoa:F57B9.6a.2 GeneID:175966 KEGG:cel:CELE_F57B9.6
UCSC:F57B9.6a.1 CTD:175966 WormBase:F57B9.6a WormBase:F57B9.6b
InParanoid:P27639 NextBio:890522 Uniprot:P27639
Length = 402
Score = 382 (139.5 bits), Expect = 1.6e-34, P = 1.6e-34
Identities = 102/341 (29%), Positives = 176/341 (51%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
FD+ + ++ + G+ + + +Q+ + C GKD + +A++GTGK+ F + +
Sbjct: 31 FDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGKTATFSV----S 86
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+L+ P + L++ PTRELA QI + ++ L + + +L +GGT + DQ
Sbjct: 87 ILQRIDHED----PHVQALVMAPTRELAQQIQ-KVMSALGEYLNVNILPCIGGTSVRDDQ 141
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
R+LE+ ++V TPGR+ D I N++ L +KM VLDEAD +L GF+ + +
Sbjct: 142 RKLEAG-IHVVVGTPGRVGDMI-NRNALDTSR--IKMFVLDEADEMLSRGFKDQIYEVFR 197
Query: 561 CLPRRRQSLLFSATMPKEL--VLKREHTYIDTVGLGSVETPVK-IKQSCL-VAPHELHFQ 616
+P+ Q +L SATMP E+ V R + + E ++ I+Q + V E F
Sbjct: 198 SMPQDVQVVLLSATMPSEVLDVTNRFMRNPIRILVKKDELTLEGIRQFYINVQKDEWKFD 257
Query: 617 ILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEE 676
L L +++ + ++FC+T L + E + V ++ Q RD I E
Sbjct: 258 CLCDLY--NVVNVT--QAVIFCNTRRKVDTLTEKMTENQFTVSCLHGDMDQAERDTIMRE 313
Query: 677 FRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 717
FR+ +L+T+D+ ARG+D V+ V+ +P +RE YIH
Sbjct: 314 FRSGSSRVLITTDILARGIDVQQVSLVINYDLPSNRENYIH 354
>UNIPROTKB|Q9KLE2 [details] [associations]
symbol:VC_A0804 "ATP-dependent RNA helicase DeaD"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0000910 "cytokinesis" evidence=ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] [GO:0016070 "RNA metabolic
process" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
GO:GO:0000910 EMBL:AE003853 GenomeReviews:AE003853_GR GO:GO:0016070
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
InterPro:IPR014014 PROSITE:PS51195 KO:K05592 InterPro:IPR005580
Pfam:PF03880 HSSP:P10081 OMA:ILFMTPR PIR:C82415 RefSeq:NP_233190.1
ProteinModelPortal:Q9KLE2 DNASU:2612819 GeneID:2612819
KEGG:vch:VCA0804 PATRIC:20086156 ProtClustDB:CLSK789062
Uniprot:Q9KLE2
Length = 663
Score = 401 (146.2 bits), Expect = 1.7e-34, P = 1.7e-34
Identities = 123/363 (33%), Positives = 177/363 (48%)
Query: 380 RFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIE 439
+F + ++ + ALT G++ T +Q A + LEG+DA+ KA+TGTGK+ AF LP +
Sbjct: 27 QFSDLALNSAILSALTEMGFVSPTPIQAAAIPVLLEGRDALGKAQTGTGKTAAFSLPLLN 86
Query: 440 AVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVD 499
+ + +Q P +++ PTRELA Q+AAE L +N G+ VL + GG +D
Sbjct: 87 KL------NLSQYKPQ--AIVMAPTRELAIQVAAEIKNLGQNIKGLKVLEIYGGASI-LD 137
Query: 500 QRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIV 559
Q R I+V TPGR+ D I + L +LDEAD +L +GF DV I+
Sbjct: 138 QMRALKSGAHIVVGTPGRVKDLITRDR---LHLDECHTFILDEADEMLKMGFVDDVTWIM 194
Query: 560 DCLPRRRQSLLFSATMP---KELVLK--REHTYIDTVGLGSVETPVKIKQSCLVAPHELH 614
+ P Q +LFSATMP KE+V + R +D G S +T K++Q V
Sbjct: 195 EQAPESAQRVLFSATMPPMVKEIVERFLRNPECVDVAG--SNQTVAKVEQQYWVVKGVEK 252
Query: 615 FQILHHLLKEHILGTPDYKVIVFCSTGMVTSLL--YLLLREMKMNVREMYSRKPQLYRDR 672
+ + LL+ D IVF T T L +L R K ++ PQ R+R
Sbjct: 253 DEAMARLLETE---ETDAS-IVFVRTRQDTERLADWLCARGFK--AAALHGDIPQSLRER 306
Query: 673 ISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXXXXXXXV 732
+ + ILV +DV ARG+D P +T V IP D E YIH +
Sbjct: 307 TVDHIKQGVIDILVATDVVARGLDVPRITHVYNYDIPFDVESYIHRIGRTGRAGRKGKAI 366
Query: 733 LLL 735
LL+
Sbjct: 367 LLV 369
>TIGR_CMR|VC_A0804 [details] [associations]
symbol:VC_A0804 "ATP-dependent RNA helicase DeaD"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0016070 "RNA metabolic process"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
GO:GO:0000910 EMBL:AE003853 GenomeReviews:AE003853_GR GO:GO:0016070
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
InterPro:IPR014014 PROSITE:PS51195 KO:K05592 InterPro:IPR005580
Pfam:PF03880 HSSP:P10081 OMA:ILFMTPR PIR:C82415 RefSeq:NP_233190.1
ProteinModelPortal:Q9KLE2 DNASU:2612819 GeneID:2612819
KEGG:vch:VCA0804 PATRIC:20086156 ProtClustDB:CLSK789062
Uniprot:Q9KLE2
Length = 663
Score = 401 (146.2 bits), Expect = 1.7e-34, P = 1.7e-34
Identities = 123/363 (33%), Positives = 177/363 (48%)
Query: 380 RFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIE 439
+F + ++ + ALT G++ T +Q A + LEG+DA+ KA+TGTGK+ AF LP +
Sbjct: 27 QFSDLALNSAILSALTEMGFVSPTPIQAAAIPVLLEGRDALGKAQTGTGKTAAFSLPLLN 86
Query: 440 AVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVD 499
+ + +Q P +++ PTRELA Q+AAE L +N G+ VL + GG +D
Sbjct: 87 KL------NLSQYKPQ--AIVMAPTRELAIQVAAEIKNLGQNIKGLKVLEIYGGASI-LD 137
Query: 500 QRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIV 559
Q R I+V TPGR+ D I + L +LDEAD +L +GF DV I+
Sbjct: 138 QMRALKSGAHIVVGTPGRVKDLITRDR---LHLDECHTFILDEADEMLKMGFVDDVTWIM 194
Query: 560 DCLPRRRQSLLFSATMP---KELVLK--REHTYIDTVGLGSVETPVKIKQSCLVAPHELH 614
+ P Q +LFSATMP KE+V + R +D G S +T K++Q V
Sbjct: 195 EQAPESAQRVLFSATMPPMVKEIVERFLRNPECVDVAG--SNQTVAKVEQQYWVVKGVEK 252
Query: 615 FQILHHLLKEHILGTPDYKVIVFCSTGMVTSLL--YLLLREMKMNVREMYSRKPQLYRDR 672
+ + LL+ D IVF T T L +L R K ++ PQ R+R
Sbjct: 253 DEAMARLLETE---ETDAS-IVFVRTRQDTERLADWLCARGFK--AAALHGDIPQSLRER 306
Query: 673 ISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXXXXXXXV 732
+ + ILV +DV ARG+D P +T V IP D E YIH +
Sbjct: 307 TVDHIKQGVIDILVATDVVARGLDVPRITHVYNYDIPFDVESYIHRIGRTGRAGRKGKAI 366
Query: 733 LLL 735
LL+
Sbjct: 367 LLV 369
>UNIPROTKB|A4QVP2 [details] [associations]
symbol:TIF1 "ATP-dependent RNA helicase eIF4A"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0043581 "mycelium
development" evidence=IEP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0003743 EMBL:CM001231 GO:GO:0043581 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 KO:K03257 OrthoDB:EOG4PG98F
RefSeq:XP_003711015.1 ProteinModelPortal:A4QVP2 SMR:A4QVP2
EnsemblFungi:MGG_04400T0 GeneID:2677872 KEGG:mgr:MGG_04400
Uniprot:A4QVP2
Length = 396
Score = 381 (139.2 bits), Expect = 2.1e-34, P = 2.1e-34
Identities = 106/341 (31%), Positives = 174/341 (51%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
FDE + ++ + A G+ + + +Q+ + ++G D + +A++GTGK+ F + +
Sbjct: 25 FDEMNLKSELLRGIYAYGFERPSAIQQRAIMPVIKGHDVIAQAQSGTGKTATFSI----S 80
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
VL+ ++ Q LIL PTRELA QI +A+ + I +GGT + D
Sbjct: 81 VLQKIDTNVKQC----QALILAPTRELAQQIQKVVVAI-GDFMNIECHACIGGTSVRDDM 135
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
+ L+ P Q++V TPGR+ D I+ + ++ G+KM VLDEAD +L GF + + +I
Sbjct: 136 KALQDGP-QVVVGTPGRVHDMIQRRF---LKTDGMKMFVLDEADEMLSRGFTEQIYDIFQ 191
Query: 561 CLPRRRQSLLFSATMPKELVLKREHTYIDTVGL--GSVETPVK-IKQSCL-VAPHELHFQ 616
LP+ Q +L SATMP++++ D V + E ++ IKQ + V E
Sbjct: 192 LLPQSTQVVLLSATMPQDVLEVTTKFMRDPVRILVKKDELTLEGIKQFYIAVEKEEWKLD 251
Query: 617 ILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEE 676
L L E + T + ++FC+T L L V M+ Q RD I +E
Sbjct: 252 TLSDLY-ETVTIT---QAVIFCNTRRKVDWLTDKLTARDFTVSAMHGDMDQAQRDLIMKE 307
Query: 677 FRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 717
FR+ +L+ +D+ ARG+D V+ V+ +P +RE YIH
Sbjct: 308 FRSGSSRVLIATDLLARGIDVQQVSLVINYDLPANRENYIH 348
>WB|WBGene00022029 [details] [associations]
symbol:Y65B4A.6 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0018991 "oviposition" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0018996 "molting cycle, collagen and
cuticulin-based cuticle" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0042127 "regulation of cell proliferation" evidence=IMP]
[GO:0040020 "regulation of meiosis" evidence=IMP] [GO:0007281 "germ
cell development" evidence=IMP] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0009792 GO:GO:0040007 GO:GO:0018991 GO:GO:0002119
GO:GO:0018996 GO:GO:0040011 GO:GO:0003676 GO:GO:0042127
GO:GO:0040035 GO:GO:0007281 GO:GO:0040020 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
GeneTree:ENSGT00530000062880 KO:K13025 OMA:EDWKFDT EMBL:FO081482
RefSeq:NP_490761.2 ProteinModelPortal:Q9BL61 SMR:Q9BL61
STRING:Q9BL61 PaxDb:Q9BL61 EnsemblMetazoa:Y65B4A.6 GeneID:190485
KEGG:cel:CELE_Y65B4A.6 UCSC:Y65B4A.6 CTD:190485 WormBase:Y65B4A.6
InParanoid:Q9BL61 NextBio:945920 Uniprot:Q9BL61
Length = 399
Score = 381 (139.2 bits), Expect = 2.1e-34, P = 2.1e-34
Identities = 106/341 (31%), Positives = 179/341 (52%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
FD+ G+ ++ + A G+ + + +Q+ + A L+ +D + +A++GTGK+ F + +++
Sbjct: 28 FDKMGLREDLLRGIYAYGFEKPSAIQQRAIPAILKARDVIAQAQSGTGKTATFSISVLQS 87
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+ T TQ LIL PTRELA QI +AL ++ + +GGT D
Sbjct: 88 L--DTQVRETQ------ALILSPTRELAVQIQKVVLAL-GDYMNVQCHACIGGTNLGEDI 138
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
R+L+ ++ TPGR+ D I ++ +R +K+LVLDEAD +L+ GF++ + +I
Sbjct: 139 RKLDYGQ-HVVSGTPGRVFDMIRRRN---LRTRAIKLLVLDEADEMLNKGFKEQLYDIYR 194
Query: 561 CLPRRRQSLLFSATMPKELVLKREHTYIDTVGL--GSVETPVK-IKQSCL-VAPHELHFQ 616
LP Q +L SAT+P E++ D + + E ++ IKQ + V E F
Sbjct: 195 YLPPGAQVVLLSATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFFVAVDREEWKFD 254
Query: 617 ILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEE 676
L L + + T + ++FC+T L ++E V M+ Q RD + +E
Sbjct: 255 TLIDLY-DTLTIT---QAVLFCNTRRKVDWLTDKMKEANFTVSSMHGDMEQKDRDEVMKE 310
Query: 677 FRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 717
FRA +L+++DV ARG+D P V+ V+ +P +RE YIH
Sbjct: 311 FRAGTTRVLISTDVWARGLDVPQVSLVINYDLPNNRELYIH 351
>TAIR|locus:2222617 [details] [associations]
symbol:AT5G14610 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0009664
"plant-type cell wall organization" evidence=RCA] [GO:0042545 "cell
wall modification" evidence=RCA] InterPro:IPR000629
InterPro:IPR001202 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00397 PROSITE:PS00039
PROSITE:PS01159 PROSITE:PS50020 PROSITE:PS51194 SMART:SM00456
SMART:SM00490 GO:GO:0005524 EMBL:CP002688 GO:GO:0003676
Gene3D:2.20.70.10 SUPFAM:SSF51045 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
KO:K12823 IPI:IPI00992350 RefSeq:NP_196965.2 UniGene:At.43560
ProteinModelPortal:F4K6V1 SMR:F4K6V1 PRIDE:F4K6V1
EnsemblPlants:AT5G14610.1 GeneID:831313 KEGG:ath:AT5G14610
OMA:YLIPGFM Uniprot:F4K6V1
Length = 712
Score = 407 (148.3 bits), Expect = 2.6e-34, Sum P(2) = 2.6e-34
Identities = 114/344 (33%), Positives = 182/344 (52%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F+ + P + + +AG+ + +Q + ++ +D V AKTG+GK++ +L+P
Sbjct: 231 FNSYLVLPANGRMVYSAGFSAPSPIQAQSWPIAMQNRDIVAIAKTGSGKTLGYLIPGFMH 290
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+ + + S ++ P I L+L PTRELA+QI EA+ K+ I L GG
Sbjct: 291 LQRIHNDS--RMGPTI--LVLSPTRELATQIQVEALKFGKSSK-ISCACLYGGAPKGPQL 345
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
+ +E I+VATPGRL D +E K + L + LVLDEAD +LD+GF + IV+
Sbjct: 346 KEIERG-VDIVVATPGRLNDILEMKR---ISLHQVSYLVLDEADRMLDMGFEPQIRKIVN 401
Query: 561 CLPRRRQSLLFSATMPKELVLKREHTYIDT--VGLGSVETPV---KIKQSC-LVAPHELH 614
+P +RQ+L+++AT PKE+ ++ V +G+V+ V I Q+ ++AP E H
Sbjct: 402 EVPTKRQTLMYTATWPKEVRKIAADLLVNPAQVNIGNVDELVANKSITQTIEVLAPMEKH 461
Query: 615 FQILHHLLKEHILGTPDYKVIVFCSTG-MVTSLLYLLLREMKMNVREMYSRKPQLYRDRI 673
+ L +L+ P K+I+FCST M L L R ++ K Q RD +
Sbjct: 462 SR-LEQILRSQ---EPGSKIIIFCSTKRMCDQLARNLTRTF--GAAAIHGDKSQAERDDV 515
Query: 674 SEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 717
+FR+ + +LV +DV+ARG+D D+ VV P E Y+H
Sbjct: 516 LNQFRSGRTPVLVATDVAARGLDVKDIRVVVNYDFPNGVEDYVH 559
Score = 37 (18.1 bits), Expect = 2.6e-34, Sum P(2) = 2.6e-34
Identities = 13/50 (26%), Positives = 21/50 (42%)
Query: 223 SGTDKRNFCR-NDGSSTRDKAGFDTGNKAKPFARN-----LGNNRENGDS 266
SG + + R +DG + + F+ + P + N LGN G S
Sbjct: 76 SGKEDDKYGRGSDGPKSDSGSRFNEAGRTGPISSNDAASGLGNASSGGSS 125
>WB|WBGene00018007 [details] [associations]
symbol:F33D11.10 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0009790 "embryo development"
evidence=IMP] [GO:0001703 "gastrulation with mouth forming first"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0051301
"cell division" evidence=IMP] [GO:0000910 "cytokinesis"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0018996 "molting
cycle, collagen and cuticulin-based cuticle" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0009792 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 GO:GO:0018996 GO:GO:0003676
GO:GO:0000910 GO:GO:0040035 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
GeneTree:ENSGT00530000062880 GO:GO:0001703 KO:K13025 OMA:IFGKQPF
EMBL:FO080753 PIR:T32773 RefSeq:NP_491703.1
ProteinModelPortal:O44781 SMR:O44781 DIP:DIP-27243N IntAct:O44781
MINT:MINT-1047941 STRING:O44781 PaxDb:O44781
EnsemblMetazoa:F33D11.10.1 EnsemblMetazoa:F33D11.10.2 GeneID:172258
KEGG:cel:CELE_F33D11.10 UCSC:F33D11.10.1 CTD:172258
WormBase:F33D11.10 InParanoid:O44781 NextBio:874709 Uniprot:O44781
Length = 399
Score = 380 (138.8 bits), Expect = 2.7e-34, P = 2.7e-34
Identities = 106/341 (31%), Positives = 179/341 (52%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
FD+ G+ ++ + A G+ + + +Q+ + A L+ +D + +A++GTGK+ F + +++
Sbjct: 28 FDKMGLREDLLRGIYAYGFEKPSAIQQRAVPAILKARDVIAQAQSGTGKTATFSISVLQS 87
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+ T TQ LIL PTRELA QI +AL ++ + +GGT D
Sbjct: 88 L--DTQVRETQ------ALILSPTRELAVQIQKVVLAL-GDYMNVQCHACIGGTNLGEDI 138
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
R+L+ ++ TPGR+ D I ++ +R +K+LVLDEAD +L+ GF++ + +I
Sbjct: 139 RKLDYGQ-HVVSGTPGRVFDMIRRRN---LRTRAIKLLVLDEADEMLNKGFKEQLYDIYR 194
Query: 561 CLPRRRQSLLFSATMPKELVLKREHTYIDTVGL--GSVETPVK-IKQSCL-VAPHELHFQ 616
LP Q +L SAT+P E++ D + + E ++ IKQ + V E F
Sbjct: 195 YLPPGAQVVLLSATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFFVAVDREEWKFD 254
Query: 617 ILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEE 676
L L + + T + ++FC+T L ++E V M+ Q RD + +E
Sbjct: 255 TLIDLY-DTLTIT---QAVLFCNTRRKVDWLTDKMKEANFTVSSMHGDMEQKDRDEVMKE 310
Query: 677 FRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 717
FRA +L+++DV ARG+D P V+ V+ +P +RE YIH
Sbjct: 311 FRAGTTRVLISTDVWARGLDVPQVSLVINYDLPNNRELYIH 351
>POMBASE|SPAC30D11.03 [details] [associations]
symbol:ddx27 "ATP-dependent RNA helicase Ddx27/Drs1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=ISM]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=ISO;IDA] [GO:0006364 "rRNA processing" evidence=ISO]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 PomBase:SPAC30D11.03 GO:GO:0005524 EMBL:CU329670
GO:GO:0005730 GenomeReviews:CU329670_GR GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000265456 KO:K13181 OrthoDB:EOG4B01XM PIR:S62561
RefSeq:NP_593214.1 ProteinModelPortal:Q09903 STRING:Q09903
EnsemblFungi:SPAC30D11.03.1 GeneID:2543155 KEGG:spo:SPAC30D11.03
NextBio:20804181 Uniprot:Q09903
Length = 754
Score = 401 (146.2 bits), Expect = 2.9e-34, P = 2.9e-34
Identities = 107/343 (31%), Positives = 177/343 (51%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F +S +K L+ G+ T++Q+ T+ L GKD V A TG+GK+ AF++P +E
Sbjct: 261 FQSMNLSRPILKGLSNLGFEVPTQIQDKTIPLALLGKDIVGAAVTGSGKTAAFIVPILER 320
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+L VP VLILCPTRELA Q + A + D I V +GG K+ +
Sbjct: 321 LLYRPKK-----VPTTRVLILCPTRELAMQCHSVATKIASFTD-IMVCLCIGGLSLKLQE 374
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
+ L P I++ATPGR +DH+ N G +V ++++V+DEAD +L+ GF ++ I+
Sbjct: 375 QELRKRP-DIVIATPGRFIDHMRNSQGFTVE--NIEIMVMDEADRMLEDGFADELNEIIQ 431
Query: 561 CLPRRRQSLLFSATMPKEL--VLKREHTYIDTVGLGSVETPVKI--KQSCLVAPHE--LH 614
P+ RQ++LFSATM ++ +++ V + + +T K+ ++ V P L
Sbjct: 432 ACPKSRQTMLFSATMTDKVDDLIRLSLNRPVRVFVDNKKTTAKLLTQEFVRVRPQRELLR 491
Query: 615 FQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRIS 674
+L +L KE + I+F + + ++ + +N E++ Q R R
Sbjct: 492 PAMLIYLCKELF----HRRTIIFFRSKAFAHKMRVIFGLLSLNATEIHGSLSQEQRVRAL 547
Query: 675 EEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 717
E+FR K L+ +DV++RG+D + V+ P E Y+H
Sbjct: 548 EDFRDGKCNYLLATDVASRGIDIKGIEVVINYEAPATHEVYLH 590
>RGD|2324094 [details] [associations]
symbol:Ddx55 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 55"
species:10116 "Rattus norvegicus" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 RGD:2324094
GO:GO:0005524 GO:GO:0003723 EMBL:CH473973 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959 CTD:57696 KO:K14809
OrthoDB:EOG4WH8KN GeneTree:ENSGT00550000074969 IPI:IPI00370890
RefSeq:NP_001258255.1 UniGene:Rn.209289 Ensembl:ENSRNOT00000001387
GeneID:100362764 KEGG:rno:100362764 UCSC:RGD:2324094 Uniprot:D3ZX56
Length = 600
Score = 396 (144.5 bits), Expect = 3.1e-34, P = 3.1e-34
Identities = 115/371 (30%), Positives = 179/371 (48%)
Query: 386 ISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKAT 445
+ PL + AL G++ MT VQ AT+ + KD +A TG+GK++AF++P +E +L+
Sbjct: 16 LHPLVLGALRELGFLHMTPVQSATIPLFMRNKDVAAEAVTGSGKTLAFVIPILEILLRRE 75
Query: 446 SSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLES 505
V I ++ PTRELA QI K+ + +GG D R +
Sbjct: 76 EKLKKNQVGAI---VITPTRELAIQIDEVLSHFTKHFPQFSQILWIGGRNPGEDVERFKQ 132
Query: 506 DPCQILVATPGRLLDHIENKS-GLSVR--LMGLKMLVLDEADHLLDLGFRKDVENIVDCL 562
I+VATPGRL D K+ GL + + L +LVLDEAD LLD+GF + I++ L
Sbjct: 133 HGGNIIVATPGRLEDMFRRKAEGLDLASYVKSLDVLVLDEADRLLDMGFEASINTILEFL 192
Query: 563 PRRRQSLLFSATMPKEL--VLK---REHTYIDT----VGLGSVE-TPVKIKQSCLVAPHE 612
P++R++ LFSAT +E+ +++ R I V S + TP +++ ++ +
Sbjct: 193 PKQRRTGLFSATQTQEVENLVRAGLRNPVRISVKEKGVAASSTQKTPSRLENHYMICKAD 252
Query: 613 LHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLY-RD 671
F L H L+ K +VF ST L + V+ + Y R+
Sbjct: 253 EKFNQLVHFLRSR----QQEKHLVFFSTCACVEYYGKALEALVQRVKILCIHGKMKYKRN 308
Query: 672 RISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXXXXXXX 731
+I EFR + ILV +DV ARG+D P+V V+Q P + ++H
Sbjct: 309 KIFMEFRKLQSGILVCTDVMARGIDIPEVNWVLQYDPPSNASAFVHRCGRTARIGHGGSA 368
Query: 732 VLLLAPWEEYF 742
++ L P EE +
Sbjct: 369 LVFLLPMEEAY 379
>UNIPROTKB|Q4K4H4 [details] [associations]
symbol:rhlE_2 "Putative ATP-dependent RNA helicase"
species:220664 "Pseudomonas protegens Pf-5" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0006139 GO:GO:0003676
EMBL:CP000076 GenomeReviews:CP000076_GR InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927
OMA:DGDLMGF ProtClustDB:CLSK865855 RefSeq:YP_262859.1
ProteinModelPortal:Q4K4H4 GeneID:3480173 KEGG:pfl:PFL_5801
PATRIC:19881109 BioCyc:PFLU220664:GIX8-5841-MONOMER Uniprot:Q4K4H4
Length = 622
Score = 397 (144.8 bits), Expect = 3.2e-34, P = 3.2e-34
Identities = 121/366 (33%), Positives = 185/366 (50%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F G+S + A+ AAGY Q T VQ+ + A L+G+D +V A+TGTGK+ F LP +E
Sbjct: 3 FASLGLSEALVGAIEAAGYTQPTPVQQRAIPAVLQGRDLMVAAQTGTGKTGGFALPILER 62
Query: 441 VLKATSSSTTQLVPPIY--VLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
+ +Q P VL+L PTRELA+Q+ ++ L + GG
Sbjct: 63 LFPNGHPDKSQRHGPRQPRVLVLTPTRELAAQVH-DSFKLYARDLKFVSACIFGGVGMN- 120
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
Q + + +LVA PGRLLD + + SV L +++LVLDEAD +LD+GF DV+ +
Sbjct: 121 PQVQAMARGVDVLVACPGRLLD-LAGQG--SVDLSHVEILVLDEADRMLDMGFVHDVKKV 177
Query: 559 VDCLPRRRQSLLFSATMPKE---LVLKREHTYIDTVGLGSVETPV-KIKQSCLVAPHELH 614
+ LP +RQ+LLFSAT K+ L K H + + + T V +I+Q P
Sbjct: 178 LARLPAKRQNLLFSATFSKDITDLAGKLLHNP-ERIEVTPPNTTVERIEQRVFRLPASHK 236
Query: 615 FQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRIS 674
+L HL+ G + +V+VF T + L L + ++ ++ K Q R +
Sbjct: 237 RALLAHLITA---GAWE-QVLVFTRTKHGANRLAEYLDKHGLSAVAIHGNKSQNARTKAL 292
Query: 675 EEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXXXXXXXVLL 734
+F+A + ILV +D++ARG+D + VV +P E Y+H + L
Sbjct: 293 ADFKAGEVRILVATDIAARGLDIDQLPHVVNFELPNVDEDYVHRIGRTGRAGRSGEAISL 352
Query: 735 LAPWEE 740
+AP EE
Sbjct: 353 VAPDEE 358
>UNIPROTKB|Q4K8U0 [details] [associations]
symbol:deaD "Cold-shock DEAD box protein A" species:220664
"Pseudomonas protegens Pf-5" [GO:0003723 "RNA binding"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0006950 "response to stress"
evidence=ISS] [GO:0008026 "ATP-dependent helicase activity"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0006950
GO:GO:0006355 GO:GO:0003723 EMBL:CP000076 GenomeReviews:CP000076_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268810 KO:K05592 InterPro:IPR005580 Pfam:PF03880
OMA:LPQGMPK RefSeq:YP_261343.1 ProteinModelPortal:Q4K8U0
GeneID:3477377 KEGG:pfl:PFL_4251 PATRIC:19877913
ProtClustDB:CLSK867560 BioCyc:PFLU220664:GIX8-4286-MONOMER
Uniprot:Q4K8U0
Length = 557
Score = 392 (143.0 bits), Expect = 3.3e-34, P = 3.3e-34
Identities = 117/397 (29%), Positives = 185/397 (46%)
Query: 386 ISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKAT 445
+ P + A+ A GY + + +Q+ ++ L G D + +A+TGTGK+ AF LP + +
Sbjct: 13 LHPNIVAAVVATGYEEPSAIQQQSIPIILAGHDMIGQAQTGTGKTAAFALPILHRI---- 68
Query: 446 SSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLES 505
++ P LIL PTRELA Q+A K G+ V+ + GG + + +
Sbjct: 69 --DPSKREPQ--ALILAPTRELALQVATAFETYAKQMPGVTVVAVYGGAPMGPQLKAIRN 124
Query: 506 DPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRR 565
QI+VATPGRL DH+ + L + LVLDEAD +L LGF D+E I +P
Sbjct: 125 G-AQIVVATPGRLCDHLRRDEKV---LATVNHLVLDEADEMLKLGFMDDLEVIFKAMPET 180
Query: 566 RQSLLFSATMPKELVLKREHTYIDT--VGLGS-VETPVKIKQSCLVAPHELHFQILHHLL 622
RQ++LFSAT+P+ + E D V + S +T I+Q+ L+ + + LL
Sbjct: 181 RQTVLFSATLPQSIRAIAERHLKDPKHVKIQSKTQTVTAIEQAHLLVHADQKTSAVLSLL 240
Query: 623 KEHILGTPDYK-VIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEFRASK 681
+ D+ +I+F T T L L + Q R+R+ + + +
Sbjct: 241 E-----VEDFDALIMFVRTKQATLDLASALEAKGYKAAALNGDIAQNQRERVIDSLKDGR 295
Query: 682 RLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXXXXXXXVLLLAPWEEY 741
I+V +DV+ARG+D P +T V V +P D E Y+H +LL+ P E
Sbjct: 296 LDIVVATDVAARGLDVPRITHVFNVDMPYDPESYVHRIGRTGRAGREGRALLLVTPRERR 355
Query: 742 FXXXXXXXXXXXXXXXXXNPEIQLQMDNHMAKIDNNV 778
P+ Q +D + K+ N++
Sbjct: 356 MLQVIERVTGQKVAEVRL-PDAQAVLDARIKKLTNSL 391
>UNIPROTKB|Q5ZLN8 [details] [associations]
symbol:DDX55 "ATP-dependent RNA helicase DDX55"
species:9031 "Gallus gallus" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
InterPro:IPR025313 Pfam:PF13959 HSSP:P26196 CTD:57696
HOGENOM:HOG000268803 HOVERGEN:HBG107796 KO:K14809 OrthoDB:EOG4WH8KN
EMBL:AJ719696 IPI:IPI00590534 RefSeq:NP_001006185.1
UniGene:Gga.42731 ProteinModelPortal:Q5ZLN8 STRING:Q5ZLN8
PRIDE:Q5ZLN8 GeneID:416820 KEGG:gga:416820 InParanoid:Q5ZLN8
NextBio:20820225 Uniprot:Q5ZLN8
Length = 591
Score = 395 (144.1 bits), Expect = 3.5e-34, P = 3.5e-34
Identities = 118/371 (31%), Positives = 181/371 (48%)
Query: 386 ISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKAT 445
+SP ++AL G+ +MT VQ AT+ + KD +A TG+GK++AF++P +E +L+
Sbjct: 16 LSPGVLRALQDLGFDRMTPVQSATIPLFMSNKDVAAEAVTGSGKTLAFVIPILEILLRRE 75
Query: 446 SSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLES 505
V I I+ PTRELA QI K+ + L+GG D + +
Sbjct: 76 EKLKKMQVGAI---IITPTRELAIQIDEVLTHFTKHFPKFSQILLIGGRNPMEDVEKFKE 132
Query: 506 DPCQILVATPGRLLDHIENKS-GLSVR--LMGLKMLVLDEADHLLDLGFRKDVENIVDCL 562
I+VATPGRL D K+ GL + + L +LVLDEAD LLD+GF + I+ L
Sbjct: 133 HGGNIIVATPGRLEDLFRRKADGLDLASCVKSLDVLVLDEADRLLDMGFESSLNAILAFL 192
Query: 563 PRRRQSLLFSATMPKE---LV---LKRE-HTYIDTVGLGSV---ETPVKIKQSCLVAPHE 612
P++R++ LFSAT +E LV L+ + G+ + +TP +++ ++ +
Sbjct: 193 PKQRRTGLFSATQTQEVENLVRAGLRNPVRISVKEKGVAATNTQKTPTRLENYYMICKAD 252
Query: 613 LHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSR-KPQLYRD 671
F L H L++H K +VF ST L + V+ M K + R+
Sbjct: 253 EKFNQLVHFLRQH----KQEKHLVFFSTCACVEYYGKALESLIKQVKIMCIHGKMKHKRN 308
Query: 672 RISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXXXXXXX 731
+I EFR ILV +DV ARG+D P+V V+Q P ++H
Sbjct: 309 KIFTEFRRLAGGILVCTDVMARGIDIPEVHWVLQYDPPSSASAFVHRCGRTARIGNAGSA 368
Query: 732 VLLLAPWEEYF 742
++ L P EE +
Sbjct: 369 LVFLLPMEESY 379
>UNIPROTKB|P21507 [details] [associations]
symbol:srmB "SrmB, DEAD-box RNA helicase" species:83333
"Escherichia coli K-12" [GO:0033592 "RNA strand annealing activity"
evidence=IDA] [GO:0030687 "preribosome, large subunit precursor"
evidence=IDA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] [GO:0000027 "ribosomal large subunit assembly"
evidence=IGI;IMP] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:U00096
EMBL:AP009048 GenomeReviews:AP009048_GR GenomeReviews:U00096_GR
EMBL:D64044 GO:GO:0030687 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 GO:GO:0000027 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0033592 EMBL:D13169
OMA:PLAMDQR HOGENOM:HOG000268807 PDB:2YJT PDBsum:2YJT EMBL:X14152
PIR:G65035 RefSeq:NP_417071.1 RefSeq:YP_490804.1
ProteinModelPortal:P21507 SMR:P21507 DIP:DIP-10920N IntAct:P21507
MINT:MINT-1225512 PRIDE:P21507 EnsemblBacteria:EBESCT00000003180
EnsemblBacteria:EBESCT00000015098 GeneID:12934372 GeneID:947055
KEGG:ecj:Y75_p2529 KEGG:eco:b2576 PATRIC:32120551 EchoBASE:EB0968
EcoGene:EG10975 KO:K05590 ProtClustDB:PRK11192
BioCyc:EcoCyc:EG10975-MONOMER BioCyc:ECOL316407:JW2560-MONOMER
Genevestigator:P21507 Uniprot:P21507
Length = 444
Score = 378 (138.1 bits), Expect = 4.4e-34, P = 4.4e-34
Identities = 110/343 (32%), Positives = 180/343 (52%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F E + ++AL G+ + T +Q A + L+G+D + A TGTGK+ A+LLPA++
Sbjct: 6 FSELELDESLLEALQDKGFTRPTAIQAAAIPPALDGRDVLGSAPTGTGKTAAYLLPALQH 65
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+L + PP +LIL PTRELA Q++ A L K H + + T+ GG + ++
Sbjct: 66 LLDFPRKKSG---PP-RILILTPTRELAMQVSDHARELAK-HTHLDIATITGGVAY-MNH 119
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
+ S+ I+VAT GRLL +I+ ++ R ++ L+LDEAD +LD+GF +D+E+I
Sbjct: 120 AEVFSENQDIVVATTGRLLQYIKEEN-FDCR--AVETLILDEADRMLDMGFAQDIEHIAG 176
Query: 561 CLPRRRQSLLFSATMPKELVLK-REHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQI-- 617
R+Q+LLFSAT+ + + E D V + + + + K+ H+ +++
Sbjct: 177 ETRWRKQTLLFSATLEGDAIQDFAERLLEDPVEVSANPSTRERKKI-----HQWYYRADD 231
Query: 618 LHH--LLKEHILGTPDY-KVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRIS 674
L H L H+L P+ + IVF L LRE +N + Q R+
Sbjct: 232 LEHKTALLVHLLKQPEATRSIVFVRKRERVHELANWLREAGINNCYLEGEMVQGKRNEAI 291
Query: 675 EEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 717
+ + +LV +DV+ARG+D PDV+ V +P + Y+H
Sbjct: 292 KRLTEGRVNVLVATDVAARGIDIPDVSHVFNFDMPRSGDTYLH 334
>UNIPROTKB|Q48AV0 [details] [associations]
symbol:CPS_0042 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0016070
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 RefSeq:YP_266818.1 ProteinModelPortal:Q48AV0
GeneID:3521124 KEGG:cps:CPS_0042 PATRIC:21463513 OMA:AITESAY
BioCyc:CPSY167879:GI48-153-MONOMER Uniprot:Q48AV0
Length = 420
Score = 378 (138.1 bits), Expect = 4.4e-34, P = 4.4e-34
Identities = 108/370 (29%), Positives = 189/370 (51%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F + +KA+T + Y + T +Q+ ++ L D + +A+TGTGK+ AF LP ++
Sbjct: 7 FSSFSLDSTLLKAITESAYDEPTEIQKQSIPLILAKHDVMARAQTGTGKTAAFALPILQQ 66
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGG--TRFKV 498
++ S P + L+L PTRELA Q+ ++ + + GG T+ ++
Sbjct: 67 LI-----SVQPCKPELRALVLTPTRELAQQVH-KSFCHYGQFTDVTIGIAYGGVSTKKQI 120
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
+ ++ D IL+ATPGRLLD + +S V L ++ LV DEAD +LD+GF+++++ I
Sbjct: 121 SELKVGVD---ILIATPGRLLDLLRTES---VSLSNIETLVFDEADRMLDMGFKEEIDQI 174
Query: 559 VDCLPRRRQSLLFSATMPKELVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQI- 617
LP+ +Q+LLFSAT ++ ++ ++ VE K K + V +L + +
Sbjct: 175 TQYLPKTKQTLLFSATFADDIYKMSKNILVEPK---MVEIDEKNKAADDV--EQLVYGVD 229
Query: 618 --LHHLLKEHILGTPDYK-VIVFCSTGMVTSLLYLLLREM-KMNVREM--YSRKPQLYRD 671
L ++G+ ++K V+VF T L +EM K V+ + + K Q R+
Sbjct: 230 ADRKRELTSFLIGSRNWKQVLVFTRTKQCADDL---AKEMTKDGVKSLAIHGDKSQGARE 286
Query: 672 RISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXXXXXXX 731
+ EF+ K L+ +DV+ARG+D ++ V+ +P + E Y+H
Sbjct: 287 KALHEFKEGKVRALIATDVAARGIDIKGLSHVINYELPYNAEDYVHRIGRTARAGNSGLA 346
Query: 732 VLLLAPWEEY 741
V L++P EE+
Sbjct: 347 VSLVSPGEEW 356
>TIGR_CMR|CPS_0042 [details] [associations]
symbol:CPS_0042 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0016070
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 RefSeq:YP_266818.1 ProteinModelPortal:Q48AV0
GeneID:3521124 KEGG:cps:CPS_0042 PATRIC:21463513 OMA:AITESAY
BioCyc:CPSY167879:GI48-153-MONOMER Uniprot:Q48AV0
Length = 420
Score = 378 (138.1 bits), Expect = 4.4e-34, P = 4.4e-34
Identities = 108/370 (29%), Positives = 189/370 (51%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F + +KA+T + Y + T +Q+ ++ L D + +A+TGTGK+ AF LP ++
Sbjct: 7 FSSFSLDSTLLKAITESAYDEPTEIQKQSIPLILAKHDVMARAQTGTGKTAAFALPILQQ 66
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGG--TRFKV 498
++ S P + L+L PTRELA Q+ ++ + + GG T+ ++
Sbjct: 67 LI-----SVQPCKPELRALVLTPTRELAQQVH-KSFCHYGQFTDVTIGIAYGGVSTKKQI 120
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
+ ++ D IL+ATPGRLLD + +S V L ++ LV DEAD +LD+GF+++++ I
Sbjct: 121 SELKVGVD---ILIATPGRLLDLLRTES---VSLSNIETLVFDEADRMLDMGFKEEIDQI 174
Query: 559 VDCLPRRRQSLLFSATMPKELVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQI- 617
LP+ +Q+LLFSAT ++ ++ ++ VE K K + V +L + +
Sbjct: 175 TQYLPKTKQTLLFSATFADDIYKMSKNILVEPK---MVEIDEKNKAADDV--EQLVYGVD 229
Query: 618 --LHHLLKEHILGTPDYK-VIVFCSTGMVTSLLYLLLREM-KMNVREM--YSRKPQLYRD 671
L ++G+ ++K V+VF T L +EM K V+ + + K Q R+
Sbjct: 230 ADRKRELTSFLIGSRNWKQVLVFTRTKQCADDL---AKEMTKDGVKSLAIHGDKSQGARE 286
Query: 672 RISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXXXXXXX 731
+ EF+ K L+ +DV+ARG+D ++ V+ +P + E Y+H
Sbjct: 287 KALHEFKEGKVRALIATDVAARGIDIKGLSHVINYELPYNAEDYVHRIGRTARAGNSGLA 346
Query: 732 VLLLAPWEEY 741
V L++P EE+
Sbjct: 347 VSLVSPGEEW 356
>ZFIN|ZDB-GENE-040426-915 [details] [associations]
symbol:eif4a3 "eukaryotic translation initiation
factor 4A, isoform 3" species:7955 "Danio rerio" [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0051028 "mRNA transport" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006417 "regulation of
translation" evidence=IEA] [GO:0016607 "nuclear speck"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 ZFIN:ZDB-GENE-040426-915
GO:GO:0005524 GO:GO:0005737 GO:GO:0006417 GO:GO:0000184
GO:GO:0008380 GO:GO:0016607 GO:GO:0006397 GO:GO:0003723
GO:GO:0051028 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 KO:K13025 CTD:9775
OrthoDB:EOG4229JV EMBL:BC045939 IPI:IPI00481285 RefSeq:NP_957372.1
UniGene:Dr.78203 ProteinModelPortal:Q7ZVA6 SMR:Q7ZVA6 STRING:Q7ZVA6
PRIDE:Q7ZVA6 GeneID:394053 KEGG:dre:394053 InParanoid:Q7ZVA6
NextBio:20815014 ArrayExpress:Q7ZVA6 Uniprot:Q7ZVA6
Length = 406
Score = 378 (138.1 bits), Expect = 4.4e-34, P = 4.4e-34
Identities = 103/341 (30%), Positives = 175/341 (51%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
FD G+ ++ + A G+ + + +Q+ + ++G+D + ++++GTGK+ F + ++
Sbjct: 35 FDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFCVSVLQC 94
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+ TQ LIL PTRELA QI +AL ++ + +GGT D
Sbjct: 95 L--DIQVRETQ------ALILAPTRELAGQIQKVLLAL-GDYMNVQCHACIGGTNVGEDI 145
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
R+L+ ++ TPGR+ D I +S +R +KMLVLDEAD +L+ GF++ + ++
Sbjct: 146 RKLDYGQ-HVVAGTPGRVFDMIRRRS---LRTRAIKMLVLDEADEMLNKGFKEQIYDVYR 201
Query: 561 CLPRRRQSLLFSATMPKELVLKREHTYIDTVGL--GSVETPVK-IKQSCL-VAPHELHFQ 616
LP Q L SAT+P E++ D + + E ++ IKQ + V E F
Sbjct: 202 YLPPATQVCLISATLPHEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAVEREEWKFD 261
Query: 617 ILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEE 676
L L + + T + ++FC+T L +RE V M+ PQ R+ I +E
Sbjct: 262 TLCDLY-DTLTIT---QAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKE 317
Query: 677 FRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 717
FR+ +L+++DV ARG+D V+ ++ +P +RE YIH
Sbjct: 318 FRSGASRVLISTDVWARGLDVSQVSLIINYDLPNNRELYIH 358
>SGD|S000003046 [details] [associations]
symbol:DBP3 "RNA-Dependent ATPase, member of DExD/H-box
family" species:4932 "Saccharomyces cerevisiae" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=IDA] [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0030687 "preribosome, large
subunit precursor" evidence=IDA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0042254 "ribosome biogenesis" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008186 "RNA-dependent ATPase activity" evidence=IDA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0000464
"endonucleolytic cleavage in ITS1 upstream of 5.8S rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 SGD:S000003046 GO:GO:0005524
GO:GO:0005730 EMBL:BK006941 GO:GO:0003723 GO:GO:0030687
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 KO:K14811 OrthoDB:EOG42JS0S EMBL:M80437
EMBL:Z72600 PIR:S30805 RefSeq:NP_011437.3 RefSeq:NP_011442.3
ProteinModelPortal:P20447 SMR:P20447 DIP:DIP-2668N IntAct:P20447
MINT:MINT-1164200 STRING:P20447 PaxDb:P20447 PeptideAtlas:P20447
EnsemblFungi:YGL078C GeneID:852802 GeneID:852806 KEGG:sce:YGL073W
KEGG:sce:YGL078C CYGD:YGL078c GeneTree:ENSGT00680000100003
KO:K09419 OMA:EEEWPEK NextBio:972321 Genevestigator:P20447
GermOnline:YGL078C GO:GO:0000464 Uniprot:P20447
Length = 523
Score = 380 (138.8 bits), Expect = 5.1e-34, Sum P(2) = 5.1e-34
Identities = 119/352 (33%), Positives = 190/352 (53%)
Query: 374 PILSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAF 433
P+LS FD + +I+A + + + T +Q L GKD V A+TG+GK+ AF
Sbjct: 112 PLLS---FDYLSLDS-SIQA-EISKFPKPTPIQAVAWPYLLSGKDVVGVAETGSGKTFAF 166
Query: 434 LLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGG 493
+PAI ++ Q I VL++ PTRELASQI I +L + G+ + GG
Sbjct: 167 GVPAISHLMN------DQKKRGIQVLVISPTRELASQIYDNLI-VLTDKVGMQCCCVYGG 219
Query: 494 TRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRK 553
D++R++ Q++VATPGRLLD ++ G SV L + LVLDEAD +L+ GF +
Sbjct: 220 V--PKDEQRIQLKKSQVVVATPGRLLDLLQE--G-SVDLSQVNYLVLDEADRMLEKGFEE 274
Query: 554 DVENIV-DCLPRRRQSLLFSATMPKELVLKREHTYIDT---VGLGSVE--TPVK-IKQSC 606
D++NI+ + +RQ+L+F+AT PKE V + T+++ V +G+ + T K I Q
Sbjct: 275 DIKNIIRETDASKRQTLMFTATWPKE-VRELASTFMNNPIKVSIGNTDQLTANKRITQIV 333
Query: 607 -LVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRK 665
+V P ++L L K H + KV++F + + L+ NV ++
Sbjct: 334 EVVDPRGKERKLLELLKKYHSGPKKNEKVLIFALYKKEAARVERNLKYNGYNVAAIHGDL 393
Query: 666 PQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 717
Q R + EF++ K +L+ +DV+ARG+D P+V +V+ + P E Y+H
Sbjct: 394 SQQQRTQALNEFKSGKSNLLLATDVAARGLDIPNVKTVINLTFPLTVEDYVH 445
Score = 37 (18.1 bits), Expect = 5.1e-34, Sum P(2) = 5.1e-34
Identities = 13/41 (31%), Positives = 17/41 (41%)
Query: 314 KKMGSSASLGKYDMKITKRVPLKSLEDEHDFEEQVELIRKE 354
KK K D K K K + E E++VE+ KE
Sbjct: 21 KKKSKKHKKDKKDKKEKKDKKHKKHKKEKKGEKEVEVPEKE 61
>UNIPROTKB|Q8NHQ9 [details] [associations]
symbol:DDX55 "ATP-dependent RNA helicase DDX55"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
InterPro:IPR025313 Pfam:PF13959 HSSP:P26196 CTD:57696
HOGENOM:HOG000268803 HOVERGEN:HBG107796 KO:K14809 OrthoDB:EOG4WH8KN
OMA:CACVEYW EMBL:AC055713 EMBL:AC117503 EMBL:BC030020 EMBL:AL833756
EMBL:AB046815 IPI:IPI00185361 RefSeq:NP_065987.1 UniGene:Hs.286173
ProteinModelPortal:Q8NHQ9 SMR:Q8NHQ9 STRING:Q8NHQ9
PhosphoSite:Q8NHQ9 DMDM:296439376 PaxDb:Q8NHQ9 PRIDE:Q8NHQ9
Ensembl:ENST00000238146 GeneID:57696 KEGG:hsa:57696 UCSC:uc001ufi.3
GeneCards:GC12P124086 HGNC:HGNC:20085 neXtProt:NX_Q8NHQ9
PharmGKB:PA134984021 InParanoid:Q8NHQ9 ChiTaRS:DDX55
GenomeRNAi:57696 NextBio:64547 ArrayExpress:Q8NHQ9 Bgee:Q8NHQ9
CleanEx:HS_DDX55 Genevestigator:Q8NHQ9 GermOnline:ENSG00000111364
Uniprot:Q8NHQ9
Length = 600
Score = 394 (143.8 bits), Expect = 5.3e-34, P = 5.3e-34
Identities = 117/371 (31%), Positives = 178/371 (47%)
Query: 386 ISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKAT 445
+ P + AL G+ MT VQ AT+ + KD +A TG+GK++AF++P +E +L+
Sbjct: 16 LHPQVLGALRELGFPYMTPVQSATIPLFMRNKDVAAEAVTGSGKTLAFVIPILEILLRRE 75
Query: 446 SSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLES 505
V I I+ PTRELA QI K+ + +GG D R +
Sbjct: 76 EKLKKSQVGAI---IITPTRELAIQIDEVLSHFTKHFPEFSQILWIGGRNPGEDVERFKQ 132
Query: 506 DPCQILVATPGRLLDHIENKS-GLSVR--LMGLKMLVLDEADHLLDLGFRKDVENIVDCL 562
I+VATPGRL D K+ GL + + L +LVLDEAD LLD+GF + I++ L
Sbjct: 133 QGGNIIVATPGRLEDMFRRKAEGLDLASCVRSLDVLVLDEADRLLDMGFEASINTILEFL 192
Query: 563 PRRRQSLLFSATMPKEL--VLK---REHTYIDT----VGLGSVE-TPVKIKQSCLVAPHE 612
P++R++ LFSAT +E+ +++ R + V S + TP +++ +V +
Sbjct: 193 PKQRRTGLFSATQTQEVENLVRAGLRNPVRVSVKEKGVAASSAQKTPSRLENYYMVCKAD 252
Query: 613 LHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLY-RD 671
F L H L+ H K +VF ST L + V+ M Y R+
Sbjct: 253 EKFNQLVHFLRNH----KQEKHLVFFSTCACVEYYGKALEVLVKGVKIMCIHGKMKYKRN 308
Query: 672 RISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXXXXXXX 731
+I EFR + ILV +DV ARG+D P+V V+Q P + ++H
Sbjct: 309 KIFMEFRKLQSGILVCTDVMARGIDIPEVNWVLQYDPPSNASAFVHRCGRTARIGHGGSA 368
Query: 732 VLLLAPWEEYF 742
++ L P EE +
Sbjct: 369 LVFLLPMEESY 379
>WB|WBGene00022148 [details] [associations]
symbol:Y71G12B.8 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00550000074997 EMBL:FO080942 RefSeq:NP_490891.2
ProteinModelPortal:Q95XM9 SMR:Q95XM9 PaxDb:Q95XM9
EnsemblMetazoa:Y71G12B.8 GeneID:171743 KEGG:cel:CELE_Y71G12B.8
UCSC:Y71G12B.8 CTD:171743 WormBase:Y71G12B.8 InParanoid:Q95XM9
OMA:ETDREAM NextBio:872509 Uniprot:Q95XM9
Length = 739
Score = 398 (145.2 bits), Expect = 5.9e-34, P = 5.9e-34
Identities = 110/343 (32%), Positives = 178/343 (51%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F++ +S +KA + AGY T +Q+A + L GKD A TGTGK+ AF+LP +E
Sbjct: 150 FEQMNLSRQILKACSGAGYSDPTPIQQACIPVALTGKDICACAATGTGKTAAFVLPILER 209
Query: 441 VL-KATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVD 499
++ + +S T+ VL+L PTRELA Q+ + L + V GG K
Sbjct: 210 MIYRPKGASCTR------VLVLVPTRELAIQVF-QVFRKLSTFIQLEVCLCAGGLDLKAQ 262
Query: 500 QRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIV 559
+ L S P ++VATPGRL+DH+ N S L +++LVLDEAD +L+ FR + ++
Sbjct: 263 EAALRSGP-DVVVATPGRLIDHLHNSP--SFNLSNIEVLVLDEADRMLEEAFRDQMNELI 319
Query: 560 DCLPRRRQSLLFSATMPKELVLKREHTYIDTVGL---GSVETPVKIKQSCLV--APHELH 614
+ RQ+LLFSATM +E+ + V + + +T +K++Q + A E
Sbjct: 320 RLCAQNRQTLLFSATMTEEIDELASMSLQKPVKIFINENTDTALKLRQEFIRIRAGRETD 379
Query: 615 FQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRIS 674
+ + L T IVF T + +LL + + V +M S Q R
Sbjct: 380 REAMVAALVTRTFQT---NTIVFVRTKKDCQRMQILLGLLGIKVGQMQSSLTQGQRIESL 436
Query: 675 EEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 717
+F+ ++ +LV++D+++RG+D V +V+ + +P +QYIH
Sbjct: 437 SKFKKAEIDVLVSTDLASRGLDIEGVQTVINMNMPKSIKQYIH 479
>UNIPROTKB|D4ADV9 [details] [associations]
symbol:Ddx4 "Probable ATP-dependent RNA helicase DDX4"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 IPI:IPI00782021 Ensembl:ENSRNOT00000060732
Uniprot:D4ADV9
Length = 674
Score = 396 (144.5 bits), Expect = 6.7e-34, P = 6.7e-34
Identities = 111/348 (31%), Positives = 186/348 (53%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F+E + + AGY ++T VQ+ ++ L G+D + A+TG+GK+ AFLLP +
Sbjct: 264 FEEANLCQTLNNNIAKAGYTKLTPVQKYSIPIVLAGRDLMACAQTGSGKTAAFLLPILAH 323
Query: 441 VLK--ATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
+++ T+S +L P +I+ PTREL +QI EA + + + GGT+F
Sbjct: 324 MMRDGITASRFKELQEP-ECIIVAPTRELINQIYLEA-RKFSFGTCVRAVVIYGGTQFGH 381
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
R++ C IL ATPGRL+D I + + L +K LVLDEAD +LD+GF +++ +
Sbjct: 382 SIRQIVQG-CNILCATPGRLMDIIGKEK---IGLKQVKYLVLDEADRMLDMGFGPEMKKL 437
Query: 559 VDC--LPRR--RQSLLFSATMPKELV-LKREH---TYIDTVGLGSVETPVK-IKQSCLVA 609
+ C +P + RQ+LLFSAT P+E+ L E Y+ V +G V + ++QS L
Sbjct: 438 ISCPGMPSKEQRQTLLFSATFPEEIQRLAGEFLKSNYL-FVAVGQVGGACRDVQQSILQV 496
Query: 610 PHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLY 669
+ L +L+ +G D + +VF T + L + K++ ++ + Q
Sbjct: 497 GQYSKREKLVEILRN--IG--DERTMVFVETKKKADFIATFLCQEKISTTSIHGDREQRE 552
Query: 670 RDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 717
R++ +FR K +LV + V+ARG+D +V V+ +P ++Y+H
Sbjct: 553 REQALGDFRCGKCPVLVATSVAARGLDIENVQHVINFDLPSTIDEYVH 600
>UNIPROTKB|F1P8J6 [details] [associations]
symbol:DDX55 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313
Pfam:PF13959 CTD:57696 KO:K14809 GeneTree:ENSGT00550000074969
EMBL:AAEX03014637 RefSeq:XP_543371.2 Ensembl:ENSCAFT00000011945
GeneID:486246 KEGG:cfa:486246 Uniprot:F1P8J6
Length = 599
Score = 393 (143.4 bits), Expect = 6.9e-34, P = 6.9e-34
Identities = 116/371 (31%), Positives = 180/371 (48%)
Query: 386 ISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKAT 445
+ P + AL G+ MT VQ AT+ ++ KD +A TG+GK++AF++P +E +L+
Sbjct: 16 LHPQVLGALGQLGFPHMTPVQSATIPLFMKNKDVAAEAVTGSGKTLAFVIPILEILLRRE 75
Query: 446 SSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLES 505
V I I+ PTRELA Q+ K+ + +GG D R +
Sbjct: 76 EKLKKNQVGAI---IITPTRELAIQVDEVLAHFTKSFPQFSQILWIGGRNPADDVSRFKE 132
Query: 506 DPCQILVATPGRLLDHIENK-SGLSVR--LMGLKMLVLDEADHLLDLGFRKDVENIVDCL 562
I+VATPGRL D K GL + + L++LVLDEAD LLD+GF + I++ L
Sbjct: 133 QGGNIIVATPGRLEDMFRRKVEGLDLASCVKSLEVLVLDEADRLLDMGFEASINTILEFL 192
Query: 563 PRRRQSLLFSATMPKEL--VLK---REHTYIDT----VGLGSVE-TPVKIKQSCLVAPHE 612
P++R++ LFSAT +E+ +++ R I V S + TP +++ +V +
Sbjct: 193 PKQRRTGLFSATQTQEVESLVRAGLRNPVRISVKEKGVAASSTQKTPSRLENYYMVCKAD 252
Query: 613 LHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSR-KPQLYRD 671
F L H L+ H K ++F ST L + +V+ M K + R+
Sbjct: 253 EKFNQLVHFLRNH----KQEKHLIFFSTCACVEYYGKALEALVKSVKIMCIHGKMKHKRN 308
Query: 672 RISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXXXXXXX 731
+I EFR + ILV +DV ARG+D P+V V+Q P ++H
Sbjct: 309 KIFMEFRKLQSGILVCTDVMARGIDIPEVNWVLQYDPPSSASAFVHRCGRTARIGHGGSA 368
Query: 732 VLLLAPWEEYF 742
++ L P EE +
Sbjct: 369 LVFLLPMEESY 379
>UNIPROTKB|Q48PB7 [details] [associations]
symbol:PSPPH_0449 "ATP-dependent RNA helicase RhlE,
putative" species:264730 "Pseudomonas syringae pv. phaseolicola
1448A" [GO:0006139 "nucleobase-containing compound metabolic
process" evidence=ISS] [GO:0008026 "ATP-dependent helicase
activity" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:CP000058 GenomeReviews:CP000058_GR InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927
RefSeq:YP_272752.1 ProteinModelPortal:Q48PB7 GeneID:3558820
KEGG:psp:PSPPH_0449 PATRIC:19969930 OMA:DGDLMGF
ProtClustDB:CLSK865855 Uniprot:Q48PB7
Length = 625
Score = 394 (143.8 bits), Expect = 7.3e-34, P = 7.3e-34
Identities = 122/368 (33%), Positives = 187/368 (50%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F G+S ++A+ AAGY Q T VQ+ + A L+G+D +V A+TGTGK+ F LP +E
Sbjct: 3 FASLGLSEALVRAIEAAGYTQPTPVQQRAIPAVLQGRDLMVAAQTGTGKTGGFALPILER 62
Query: 441 VLKATSSSTTQLVPPIY--VLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
+ +Q P VL+L PTRELA+Q+ E+ L + GG
Sbjct: 63 LFPNGVPDKSQRHGPRQPRVLVLTPTRELAAQVH-ESFKLYARDLKFVSACIFGGVGMN- 120
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
Q + S +LVA PGRLLD + + SV L +++LVLDEAD +LD+GF DV+ +
Sbjct: 121 PQVQAMSRGVDVLVACPGRLLD-LAGQG--SVDLSHVEILVLDEADRMLDMGFVHDVKKV 177
Query: 559 VDCLPRRRQSLLFSATMPKELVL---KREHTYIDTVGLGSVETPV-KIKQSC--LVAPHE 612
+ LP +RQ+LLFSAT ++ K H + + + T V +I+Q L A H+
Sbjct: 178 LARLPAKRQNLLFSATFSNDITSLAGKLLHNP-ERIEVTPPNTTVERIEQRVFRLAANHK 236
Query: 613 LHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDR 672
+L HL+ +G + +V+VF T + L L + + ++ K Q R +
Sbjct: 237 R--SLLAHLIT---VGAWE-QVLVFTRTKHGANRLAEYLDKHGLAAVAIHGNKSQNARTK 290
Query: 673 ISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXXXXXXXV 732
+F+A I+V +D++ARG+D + VV +P E Y+H +
Sbjct: 291 ALADFKAGDVRIMVATDIAARGLDIDQLPHVVNFELPNVDEDYVHRIGRTGRAGRSGEAI 350
Query: 733 LLLAPWEE 740
L+AP EE
Sbjct: 351 SLVAPDEE 358
>ASPGD|ASPL0000014018 [details] [associations]
symbol:fal1 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0003723 EMBL:BN001302 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195
EMBL:AACD01000139 KO:K13025 RefSeq:XP_681285.1
ProteinModelPortal:Q5AUL4 SMR:Q5AUL4 PRIDE:Q5AUL4
EnsemblFungi:CADANIAT00004036 GeneID:2869287 KEGG:ani:AN8016.2
OMA:EDWKFDT OrthoDB:EOG4HTD1W Uniprot:Q5AUL4
Length = 399
Score = 376 (137.4 bits), Expect = 7.3e-34, P = 7.3e-34
Identities = 106/341 (31%), Positives = 175/341 (51%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F++ + ++ + A GY + VQ + +G+D + +A++GTGK+ F + A++
Sbjct: 27 FEDMHLKESLLRGIYAYGYESPSAVQSRAIVQICKGRDTIAQAQSGTGKTATFSISALQV 86
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+ T TQ L+L PTRELA+QI + +AL ++ + +GGT D
Sbjct: 87 I--DTVVRETQ------ALVLSPTRELATQIQSVIMAL-GDYMNVQCHACIGGTNIGEDI 137
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
R+L+ ++ TPGR+ D I + +R +KMLVLDEAD LL+ GFR+ + ++
Sbjct: 138 RKLDYGQ-HVVSGTPGRVADMIRRRH---LRTRHIKMLVLDEADELLNRGFREQIYDVYR 193
Query: 561 CLPRRRQSLLFSATMPKELVLKREHTYIDTVGL--GSVETPVK-IKQSCL-VAPHELHFQ 616
LP Q ++ SAT+P +++ D V + E ++ IKQ + V E F
Sbjct: 194 YLPPATQVVVVSATLPYDVLDMTTKFMTDPVRVLVKRDELTLEGIKQYFIAVEKEEWKFD 253
Query: 617 ILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEE 676
L L + + T + ++FC+T L +RE V M+ PQ RD I ++
Sbjct: 254 TLCDLY-DTLTIT---QAVIFCNTRRKVDWLTDKMREANFTVSSMHGEMPQKERDSIMQD 309
Query: 677 FRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 717
FR +L+++DV ARG+D V+ V+ +P +RE YIH
Sbjct: 310 FRQGNSRVLISTDVWARGIDVQQVSLVINYDLPTNRENYIH 350
>UNIPROTKB|Q9KLH6 [details] [associations]
symbol:VC_A0768 "ATP-dependent RNA helicase, DEAD box
family" species:243277 "Vibrio cholerae O1 biovar El Tor str.
N16961" [GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0008152 "metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE003853 GenomeReviews:AE003853_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 KO:K11927
OMA:LECVINY PIR:H82418 RefSeq:NP_233154.1 ProteinModelPortal:Q9KLH6
DNASU:2612338 GeneID:2612338 KEGG:vch:VCA0768 PATRIC:20086092
ProtClustDB:CLSK869757 Uniprot:Q9KLH6
Length = 422
Score = 376 (137.4 bits), Expect = 7.3e-34, P = 7.3e-34
Identities = 111/364 (30%), Positives = 178/364 (48%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F + G+ + L+ G T +Q+ + L+GKD + A+TGTGK+ AF LP I+
Sbjct: 8 FSQLGLDSRLLNTLSELGIANPTPIQQQAIPHVLQGKDVLAGAQTGTGKTAAFGLPLIQR 67
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
++ I L+L PTRELA Q+ A K + + ++ + GGT KV
Sbjct: 68 FIEQPWQREANS-KEIRALVLVPTRELAQQVLDSLQAYAKGTE-LKIVAVYGGTSMKVQL 125
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
L IL+ATPGRLLDH KS + L +++LVLDEAD +LD+GF D++ ++
Sbjct: 126 NHLRGG-VDILIATPGRLLDHAHVKS---LFLGKVEVLVLDEADRMLDMGFMPDLQRVLR 181
Query: 561 CLPRRRQSLLFSATMPKELVLKREHTYIDTVGLG---SVETPVKIKQSCLVAPHELHFQI 617
L RQ+L FSAT ++ D + + S T ++Q +V P + +
Sbjct: 182 RLSPLRQTLFFSATFDSKIKAVAYRIMRDPIEVQVTPSNSTAETVQQ--MVYPVDKKRK- 238
Query: 618 LHHLLKEHILGTPDYK-VIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEE 676
LL +++G+ +++ V+VF T + L L+ + + K Q R + ++
Sbjct: 239 -RELLS-YLIGSKNWQQVLVFTKTRQGSDALAEELKLDGIKAVSINGDKSQGARQKALDD 296
Query: 677 FRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXXXXXXXVLLLA 736
F+A K L+ +DV+ARG+D + VV +P E Y+H V LL+
Sbjct: 297 FKAGKVRALIATDVAARGLDIAQLEQVVNYDMPFKAEDYVHRIGRTGRAGLAGLAVSLLS 356
Query: 737 PWEE 740
E+
Sbjct: 357 HDEQ 360
>TIGR_CMR|VC_A0768 [details] [associations]
symbol:VC_A0768 "ATP-dependent RNA helicase, DEAD/DEAH box
family" species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE003853 GenomeReviews:AE003853_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 KO:K11927
OMA:LECVINY PIR:H82418 RefSeq:NP_233154.1 ProteinModelPortal:Q9KLH6
DNASU:2612338 GeneID:2612338 KEGG:vch:VCA0768 PATRIC:20086092
ProtClustDB:CLSK869757 Uniprot:Q9KLH6
Length = 422
Score = 376 (137.4 bits), Expect = 7.3e-34, P = 7.3e-34
Identities = 111/364 (30%), Positives = 178/364 (48%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F + G+ + L+ G T +Q+ + L+GKD + A+TGTGK+ AF LP I+
Sbjct: 8 FSQLGLDSRLLNTLSELGIANPTPIQQQAIPHVLQGKDVLAGAQTGTGKTAAFGLPLIQR 67
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
++ I L+L PTRELA Q+ A K + + ++ + GGT KV
Sbjct: 68 FIEQPWQREANS-KEIRALVLVPTRELAQQVLDSLQAYAKGTE-LKIVAVYGGTSMKVQL 125
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
L IL+ATPGRLLDH KS + L +++LVLDEAD +LD+GF D++ ++
Sbjct: 126 NHLRGG-VDILIATPGRLLDHAHVKS---LFLGKVEVLVLDEADRMLDMGFMPDLQRVLR 181
Query: 561 CLPRRRQSLLFSATMPKELVLKREHTYIDTVGLG---SVETPVKIKQSCLVAPHELHFQI 617
L RQ+L FSAT ++ D + + S T ++Q +V P + +
Sbjct: 182 RLSPLRQTLFFSATFDSKIKAVAYRIMRDPIEVQVTPSNSTAETVQQ--MVYPVDKKRK- 238
Query: 618 LHHLLKEHILGTPDYK-VIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEE 676
LL +++G+ +++ V+VF T + L L+ + + K Q R + ++
Sbjct: 239 -RELLS-YLIGSKNWQQVLVFTKTRQGSDALAEELKLDGIKAVSINGDKSQGARQKALDD 296
Query: 677 FRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXXXXXXXVLLLA 736
F+A K L+ +DV+ARG+D + VV +P E Y+H V LL+
Sbjct: 297 FKAGKVRALIATDVAARGLDIAQLEQVVNYDMPFKAEDYVHRIGRTGRAGLAGLAVSLLS 356
Query: 737 PWEE 740
E+
Sbjct: 357 HDEQ 360
>UNIPROTKB|P0A9P6 [details] [associations]
symbol:deaD "DeaD, DEAD-box RNA helicase" species:83333
"Escherichia coli K-12" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0030684 "preribosome" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0000027 "ribosomal large
subunit assembly" evidence=IMP] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=IDA] [GO:0006401 "RNA catabolic
process" evidence=IGI] [GO:0003724 "RNA helicase activity"
evidence=IDA] [GO:0070417 "cellular response to cold"
evidence=IEP;IMP] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR021046 Pfam:PF00270 Pfam:PF00271 Pfam:PF12343
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR EMBL:U18997 GO:GO:0003723 GO:GO:0006401
GO:GO:0070417 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 GO:GO:0000027 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268810 KO:K05592 InterPro:IPR005580
Pfam:PF03880 EMBL:M63288 EMBL:U03750 PIR:F65106 RefSeq:NP_417631.2
RefSeq:YP_491349.1 ProteinModelPortal:P0A9P6 SMR:P0A9P6
DIP:DIP-35752N IntAct:P0A9P6 MINT:MINT-1219396 SWISS-2DPAGE:P0A9P6
PaxDb:P0A9P6 PRIDE:P0A9P6 EnsemblBacteria:EBESCT00000000679
EnsemblBacteria:EBESCT00000014242 GeneID:12933435 GeneID:947674
KEGG:ecj:Y75_p3084 KEGG:eco:b3162 PATRIC:32121742 EchoBASE:EB0211
EcoGene:EG10215 OMA:ILFMTPR ProtClustDB:PRK11634
BioCyc:EcoCyc:EG10215-MONOMER BioCyc:ECOL316407:JW5531-MONOMER
Genevestigator:P0A9P6 GO:GO:0030684 Uniprot:P0A9P6
Length = 629
Score = 394 (143.8 bits), Expect = 7.6e-34, P = 7.6e-34
Identities = 116/341 (34%), Positives = 172/341 (50%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F + G+ ++AL GY + + +Q + L G+D + A+TG+GK+ AF LP ++
Sbjct: 8 FADLGLKAPILEALNDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAAFSLPLLQN 67
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+ +L P +L+L PTRELA Q+A K+ G+ V+ L GG R+ V
Sbjct: 68 L-------DPELKAP-QILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQL 119
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
R L P QI+V TPGRLLDH+ K G ++ L L LVLDEAD +L +GF +DVE I+
Sbjct: 120 RALRQGP-QIVVGTPGRLLDHL--KRG-TLDLSKLSGLVLDEADEMLRMGFIEDVETIMA 175
Query: 561 CLPRRRQSLLFSATMPKEL--VLKREHTYIDTVGL-GSVETPVKIKQSCLVAPHELHFQI 617
+P Q+ LFSATMP+ + + +R V + SV T I QS +
Sbjct: 176 QIPEGHQTALFSATMPEAIRRITRRFMKEPQEVRIQSSVTTRPDISQSYWTVWGMRKNEA 235
Query: 618 LHHLLKEHILGTPDYKV-IVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEE 676
L L+ D+ I+F T T + L N + Q R++ E
Sbjct: 236 LVRFLEAE-----DFDAAIIFVRTKNATLEVAEALERNGYNSAALNGDMNQALREQTLER 290
Query: 677 FRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 717
+ + IL+ +DV+ARG+D ++ VV IP D E Y+H
Sbjct: 291 LKDGRLDILIATDVAARGLDVERISLVVNYDIPMDSESYVH 331
>UNIPROTKB|F1MW45 [details] [associations]
symbol:DDX55 "ATP-dependent RNA helicase DDX55"
species:9913 "Bos taurus" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313
Pfam:PF13959 IPI:IPI00726158 UniGene:Bt.74315
GeneTree:ENSGT00550000074969 OMA:CACVEYW EMBL:DAAA02045235
Ensembl:ENSBTAT00000009556 Uniprot:F1MW45
Length = 601
Score = 392 (143.0 bits), Expect = 9.2e-34, P = 9.2e-34
Identities = 117/371 (31%), Positives = 178/371 (47%)
Query: 386 ISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKAT 445
+ P + L G+ MT VQ AT+ ++ KD +A TG+GK++AF++P +E +L+
Sbjct: 16 LHPQVLSVLRELGFPYMTPVQSATIPLFMKNKDVAAEAVTGSGKTLAFVIPIVEILLRRE 75
Query: 446 SSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLES 505
V I I+ PTRELA QI K + +GG D R +
Sbjct: 76 EKFKKSQVGAI---IITPTRELAVQIEEVLSHFTKPFPQFSQILWIGGRNPGEDVARFKE 132
Query: 506 DPCQILVATPGRLLDHIENKS-GLSVR--LMGLKMLVLDEADHLLDLGFRKDVENIVDCL 562
I+VATPGRL D K+ GL + + L++LVLDEAD LLD+GF + I++ L
Sbjct: 133 LGGNIIVATPGRLEDMFRRKAEGLDLASCVRSLEVLVLDEADRLLDMGFETSINTILEFL 192
Query: 563 PRRRQSLLFSATMPKEL--VLK---REHTYIDT----VGLGSVE-TPVKIKQSCLVAPHE 612
P++R++ LFSAT +E+ +++ R I V S + TP +++ +V +
Sbjct: 193 PKQRRTGLFSATQTQEVENLVRAGLRNPVRISVKEKGVAASSTQKTPSRLENHYMVCKAD 252
Query: 613 LHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLY-RD 671
F L H L+ H K +VF ST L + V+ M Y R+
Sbjct: 253 EKFNQLVHFLRNH----KQEKHLVFFSTCACVEYYGKALETLVKGVKIMCIHGKMKYKRN 308
Query: 672 RISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXXXXXXX 731
+I EFR + ILV +DV ARG+D P+V V+Q P + ++H
Sbjct: 309 KIFMEFRKLQSGILVCTDVMARGIDIPEVNWVLQYDPPSNASAFVHRCGRTARIGHGGSA 368
Query: 732 VLLLAPWEEYF 742
++ L P EE +
Sbjct: 369 LVFLLPMEESY 379
>UNIPROTKB|E2RMU5 [details] [associations]
symbol:DDX4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0033391 "chromatoid body" evidence=IEA]
[GO:0032880 "regulation of protein localization" evidence=IEA]
[GO:0030317 "sperm motility" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0007141 "male meiosis I"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0000237
"leptotene" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0048471 GO:GO:0032880 GO:GO:0007283
GO:GO:0003676 GO:GO:0030317 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0033391 GO:GO:0007141 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
OMA:RDAGESN GO:GO:0000237 EMBL:AAEX03001439
Ensembl:ENSCAFT00000011062 Uniprot:E2RMU5
Length = 728
Score = 385 (140.6 bits), Expect = 9.2e-34, Sum P(2) = 9.2e-34
Identities = 109/348 (31%), Positives = 185/348 (53%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F+E + + AGY ++T VQ+ ++ L G+D + A+TG+GK+ AFLLP +
Sbjct: 291 FEEANLCQTLNNNIAKAGYTKLTPVQKYSIPIILAGRDLMACAQTGSGKTAAFLLPILAH 350
Query: 441 VLK--ATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
++ T+S +L P +I+ PTREL +QI EA + + + GGT+
Sbjct: 351 MMHDGITASRFKELQEP-ECIIVAPTRELINQIYLEA-RKFSFGTCVRAVVIYGGTQLGY 408
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
R++ C IL ATPGRL+D I K + +R + K LVLDEAD +LD+GF +++ +
Sbjct: 409 SIRQIVQG-CNILCATPGRLMDII-GKEKIGLRQV--KYLVLDEADRMLDMGFGPEMKKL 464
Query: 559 VDC--LPRR--RQSLLFSATMPKELV-LKREH---TYIDTVGLGSVETPVK-IKQSCLVA 609
+ C +P + RQ+L+FSAT P+E+ L E Y+ V +G V + ++Q+ L
Sbjct: 465 ISCPGMPSKEQRQTLMFSATFPEEIQRLAGEFLKSNYL-FVAVGQVGGACRDVQQTILQV 523
Query: 610 PHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLY 669
+ L +L+ +G D + +VF T + L + K++ ++ + Q
Sbjct: 524 GQYSKREKLVEILRS--IG--DERTMVFVETKKKADFIATFLCQEKISTTSIHGDREQRE 579
Query: 670 RDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 717
R++ +FR K +LV + V+ARG+D +V V+ +P ++Y+H
Sbjct: 580 REQALGDFRCGKCPVLVATSVAARGLDIENVQHVINFDLPSTIDEYVH 627
Score = 57 (25.1 bits), Expect = 9.2e-34, Sum P(2) = 9.2e-34
Identities = 49/197 (24%), Positives = 70/197 (35%)
Query: 83 DPDSETNQHKPMSPDEHVKALA-DRFMKEGAEDLWNE--------DDGPVKSEQRPRSGA 133
D D E KP P +V DR+ D +N +DGP + + R G
Sbjct: 3 DEDWEAEIIKPHMPS-YVPVFEKDRYSSGANGDTFNRTTASSSEMNDGPSRRDHFMRGGF 61
Query: 134 EANQRPRLAGAPIDLRGL-ISDKRXXXXXXXXXXXXXXXKTRNYSVLSESKFSDRSKSAS 192
L+G + R S+KR R +S +KF + S+
Sbjct: 62 -------LSGRSMGNRDAGESNKRENTSTMGGFGVGKSFGNRGFS----NKFEE-GDSSG 109
Query: 193 LIFMPNLECNDGETVIPSRNVMDFVRRAYFS-GTDKR--NFCRNDG-SSTRD-KAGFDTG 247
N +C D +T RN F +R F G D R G S R + GF G
Sbjct: 110 FWRESNNDCEDNQT----RN-RGFSKRGGFQDGNDSEASGSSRRGGRGSFRGCRGGFGLG 164
Query: 248 NKAKPFARNLGNNRENG 264
N + + ++ G R G
Sbjct: 165 NPNREYEQDEGTQRTGG 181
>DICTYBASE|DDB_G0281711 [details] [associations]
symbol:ddx27 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0042254 "ribosome biogenesis" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
dictyBase:DDB_G0281711 GO:GO:0005524 GO:GO:0005634
GenomeReviews:CM000152_GR GO:GO:0042254 GO:GO:0003723
EMBL:AAFI02000042 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K13181 RefSeq:XP_640597.1 HSSP:Q5STU4 ProteinModelPortal:Q54TJ4
STRING:Q54TJ4 EnsemblProtists:DDB0234201 GeneID:8623207
KEGG:ddi:DDB_G0281711 OMA:SEYRAIR Uniprot:Q54TJ4
Length = 783
Score = 397 (144.8 bits), Expect = 9.3e-34, P = 9.3e-34
Identities = 109/349 (31%), Positives = 173/349 (49%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F+E +S +KA+ G+ Q T +Q + L GKD + A TG+GK+ AFLLP +E
Sbjct: 192 FEELHLSRPLLKAVQKLGFSQPTPIQAKAIPLALNGKDILASASTGSGKTAAFLLPVLER 251
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+L S I VLIL PTRELA Q + + L I +VGG K +
Sbjct: 252 LLFRDSEYRA-----IRVLILLPTRELALQCQS-VMENLAQFSNITSCLIVGGLSNKAQE 305
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
L P +++ATPGRL+DH+ N G+ L L++L+LDEAD LLD+GF+ ++ IV+
Sbjct: 306 VELRKSP-DVVIATPGRLIDHLLNAHGIG--LDDLEILILDEADRLLDMGFKDEINKIVE 362
Query: 561 CLPRRRQSLLFSATMPKELVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILHH 620
P RQ++LFSAT+ E + T+ S++ P++++ L+ Q
Sbjct: 363 SCPTNRQTMLFSATLNDE---------VKTLAKLSLQQPIRVQVDALMQVTSTLEQEFVK 413
Query: 621 LLKEHILGTPDYKV------------IVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQL 668
+ +H+ P + I+FC + L ++ + E++ Q
Sbjct: 414 IKPQHLSDRPAILLSLCTRVFNQGGTIIFCRSKKEVHRLRIIFGLSDLKAAELHGNLSQE 473
Query: 669 YRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 717
R ++FR + L+ SDV++RG+D V +V+ +P + YIH
Sbjct: 474 QRFDSLQQFRDGQVNYLLASDVASRGLDIIGVKTVINYNMPNNMANYIH 522
>UNIPROTKB|F1NJA0 [details] [associations]
symbol:DDX55 "ATP-dependent RNA helicase DDX55"
species:9031 "Gallus gallus" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313
Pfam:PF13959 GeneTree:ENSGT00550000074969 IPI:IPI00590534
OMA:CACVEYW EMBL:AADN02034882 Ensembl:ENSGALT00000005224
Uniprot:F1NJA0
Length = 591
Score = 391 (142.7 bits), Expect = 1.0e-33, P = 1.0e-33
Identities = 118/371 (31%), Positives = 180/371 (48%)
Query: 386 ISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKAT 445
+SP + AL G+ +MT VQ AT+ + KD +A TG+GK++AF++P +E +L+
Sbjct: 16 LSPGVLLALQDLGFDRMTPVQSATIPLFMSNKDVAAEAVTGSGKTLAFVIPILEILLRRE 75
Query: 446 SSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLES 505
V I I+ PTRELA QI K+ + L+GG D + +
Sbjct: 76 EKLKKMQVGAI---IITPTRELAIQIDEVLTHFTKHFPKFSQILLIGGRNPMEDVEKFKE 132
Query: 506 DPCQILVATPGRLLDHIENKS-GLSVR--LMGLKMLVLDEADHLLDLGFRKDVENIVDCL 562
I+VATPGRL D K+ GL + + L +LVLDEAD LLD+GF + I+ L
Sbjct: 133 HGGNIIVATPGRLEDLFRRKADGLDLASCVKSLDVLVLDEADRLLDMGFESSLNAILAFL 192
Query: 563 PRRRQSLLFSATMPKE---LV---LKRE-HTYIDTVGLGSV---ETPVKIKQSCLVAPHE 612
P++R++ LFSAT +E LV L+ + G+ + +TP +++ ++ +
Sbjct: 193 PKQRRTGLFSATQTQEVENLVRAGLRNPVRISVKEKGVAATNTQKTPTRLENYYMICKAD 252
Query: 613 LHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSR-KPQLYRD 671
F L H L++H K +VF ST L + V+ M K + R+
Sbjct: 253 EKFNQLVHFLRQH----KQEKHLVFFSTCACVEYYGKALESLIKQVKIMCIHGKMKHKRN 308
Query: 672 RISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXXXXXXX 731
+I EFR ILV +DV ARG+D P+V V+Q P ++H
Sbjct: 309 KIFTEFRRLAGGILVCTDVMARGIDIPEVHWVLQYDPPSSASAFVHRCGRTARIGNAGSA 368
Query: 732 VLLLAPWEEYF 742
++ L P EE +
Sbjct: 369 LVFLLPMEESY 379
>TAIR|locus:2032910 [details] [associations]
symbol:RH36 "RNA helicase 36" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA;ISS]
[GO:0006364 "rRNA processing" evidence=IMP] [GO:0009553 "embryo sac
development" evidence=IMP] [GO:0009791 "post-embryonic development"
evidence=IMP] [GO:0090406 "pollen tube" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0009561 "megagametogenesis"
evidence=IMP] [GO:0006606 "protein import into nucleus"
evidence=RCA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0005634 GO:GO:0003676
GO:GO:0009791 GO:GO:0009561 EMBL:AC006341 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K14778
HOGENOM:HOG000268802 OMA:EVRTVEQ GO:GO:0090406 IPI:IPI00521131
PIR:G86297 RefSeq:NP_173078.1 UniGene:At.51634
ProteinModelPortal:Q9SA27 SMR:Q9SA27 PaxDb:Q9SA27 PRIDE:Q9SA27
EnsemblPlants:AT1G16280.1 GeneID:838197 KEGG:ath:AT1G16280
KEGG:dosa:Os07t0633500-00 GeneFarm:1012 TAIR:At1g16280
InParanoid:Q9SA27 PhylomeDB:Q9SA27 ProtClustDB:CLSN2679781
Genevestigator:Q9SA27 GermOnline:AT1G16280 Uniprot:Q9SA27
Length = 491
Score = 374 (136.7 bits), Expect = 1.2e-33, P = 1.2e-33
Identities = 108/347 (31%), Positives = 169/347 (48%)
Query: 377 SQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLP 436
S F+ G++ ++ G + T VQ + L G+D + A+TG+GK+ AF LP
Sbjct: 56 SATNFEGLGLAEWAVETCKELGMRKPTPVQTHCVPKILAGRDVLGLAQTGSGKTAAFALP 115
Query: 437 AIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRF 496
+ + + ++ L++ PTRELA Q+A E L + + +VGG
Sbjct: 116 ILHRLAEDPYG--------VFALVVTPTRELAFQLA-EQFKALGSCLNLRCSVIVGGMDM 166
Query: 497 KVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVE 556
L S P I++ TPGR+ +EN + K LVLDEAD +LD+GF+ ++
Sbjct: 167 LTQTMSLVSRP-HIVITTPGRIKVLLENNPDVPPVFSRTKFLVLDEADRVLDVGFQDELR 225
Query: 557 NIVDCLPRRRQSLLFSATMPKELVLKREHT------YIDTVGLGSVETPVKIKQSCLVAP 610
I CLP+ RQ+LLFSATM L EH+ Y GL +V+T + Q +
Sbjct: 226 TIFQCLPKSRQTLLFSATMTSNLQALLEHSSNKAYFYEAYEGLKTVDT---LTQQFIFED 282
Query: 611 HELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYR 670
+ L H+L + + ++F ST L L+L E+++ M+S Q R
Sbjct: 283 KDAKELYLVHILSQ-MEDKGIRSAMIFVSTCRTCQRLSLMLDELEVENIAMHSLNSQSMR 341
Query: 671 DRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 717
+F++ K IL+ +DV++RG+D P V V+ IP D Y+H
Sbjct: 342 LSALSKFKSGKVPILLATDVASRGLDIPTVDLVINYDIPRDPRDYVH 388
>UNIPROTKB|F1MX40 [details] [associations]
symbol:DDX46 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 OMA:IEEENKF EMBL:DAAA02020348
EMBL:DAAA02020349 IPI:IPI00703383 Ensembl:ENSBTAT00000028682
Uniprot:F1MX40
Length = 1032
Score = 370 (135.3 bits), Expect = 1.3e-33, Sum P(2) = 1.3e-33
Identities = 112/343 (32%), Positives = 166/343 (48%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
K + +CGIS + +L GY + T +Q + A + G+D + AKTG+GK+IAFLLP
Sbjct: 372 KSWVQCGISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMF 431
Query: 439 EAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
++ S + PI V I+ PTRELA QI E K G+ V+ + GGT
Sbjct: 432 RHIMDQRSLEEGE--GPIAV-IMTPTRELALQITKECKKFSKTL-GLRVVCVYGGTGISE 487
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
L+ +I+V TPGR++D + SG L + +VLDEAD + D+GF V I
Sbjct: 488 QIAELKRG-AEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRI 546
Query: 559 VDCLPRRRQSLLFSATMPK--ELVLKREHTYIDTVGLGSVETPVK-IKQSCLVAPHELHF 615
VD + RQ+++FSAT P+ E + +R + V +G ++Q +V E F
Sbjct: 547 VDNVRPDRQTVMFSATFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQQVIVIEEEKKF 606
Query: 616 QILHHLLKEHILGTPDYKVIVFCSTGM-VTSLLYLLLREMKMNVREMYSRKPQLYRDRIS 674
L LL + VI+F LL L+R ++ Q RD I
Sbjct: 607 LKLLELLGHY---QESGSVIIFVDKQEHADGLLKDLMRA-SYPCMSLHGGIDQYDRDSII 662
Query: 675 EEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 717
+F+ +LV + V+ARG+D + VV P E Y+H
Sbjct: 663 NDFKNGTCKLLVATSVAARGLDVKHLILVVNYSCPNHYEDYVH 705
Score = 79 (32.9 bits), Expect = 1.3e-33, Sum P(2) = 1.3e-33
Identities = 34/139 (24%), Positives = 59/139 (42%)
Query: 218 RRAYFSGTDKRNFCRNDGSSTRDKAGFDTGNKAKPFARNLGNNRENGDSKNMSEFMKKKC 277
RR S +R+ R+ G +R + GNK+K A N ++E DS S+ KK
Sbjct: 82 RRRSRSRDRRRSRSRSRGRRSRSSS---PGNKSKK-AENRSRSKEKTDSGESSKEKKKDK 137
Query: 278 FVGKRRFKRNXXXXXXXXXXXXXXXXXXKVEGWRDVKKMGSSASLGKYDMKITKRVPLK- 336
+ +++ +VE WR+ ++ + ++G+ +I + K
Sbjct: 138 DDKEDEKEKDAGNFDQNKLEEEMRKRKERVEKWREEQRKKAMENIGELKKEIEEMKQGKK 197
Query: 337 -SLEDEHDFEEQVELIRKE 354
SLED+ D E+ KE
Sbjct: 198 WSLEDDDDDEDDPAEAEKE 216
>UNIPROTKB|F1PK90 [details] [associations]
symbol:DDX46 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 OMA:IEEENKF EMBL:AAEX03007786
Ensembl:ENSCAFT00000001619 Uniprot:F1PK90
Length = 1032
Score = 370 (135.3 bits), Expect = 1.3e-33, Sum P(2) = 1.3e-33
Identities = 112/343 (32%), Positives = 166/343 (48%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
K + +CGIS + +L GY + T +Q + A + G+D + AKTG+GK+IAFLLP
Sbjct: 372 KSWVQCGISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMF 431
Query: 439 EAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
++ S + PI V I+ PTRELA QI E K G+ V+ + GGT
Sbjct: 432 RHIMDQRSLEEGE--GPIAV-IMTPTRELALQITKECKKFSKTL-GLRVVCVYGGTGISE 487
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
L+ +I+V TPGR++D + SG L + +VLDEAD + D+GF V I
Sbjct: 488 QIAELKRG-AEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRI 546
Query: 559 VDCLPRRRQSLLFSATMPK--ELVLKREHTYIDTVGLGSVETPVK-IKQSCLVAPHELHF 615
VD + RQ+++FSAT P+ E + +R + V +G ++Q +V E F
Sbjct: 547 VDNVRPDRQTVMFSATFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQQVIVIEEEKKF 606
Query: 616 QILHHLLKEHILGTPDYKVIVFCSTGM-VTSLLYLLLREMKMNVREMYSRKPQLYRDRIS 674
L LL + VI+F LL L+R ++ Q RD I
Sbjct: 607 LKLLELLGHY---QESGSVIIFVDKQEHADGLLKDLMRA-SYPCMSLHGGIDQYDRDSII 662
Query: 675 EEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 717
+F+ +LV + V+ARG+D + VV P E Y+H
Sbjct: 663 NDFKNGTCKLLVATSVAARGLDVKHLILVVNYSCPNHYEDYVH 705
Score = 79 (32.9 bits), Expect = 1.3e-33, Sum P(2) = 1.3e-33
Identities = 34/139 (24%), Positives = 59/139 (42%)
Query: 218 RRAYFSGTDKRNFCRNDGSSTRDKAGFDTGNKAKPFARNLGNNRENGDSKNMSEFMKKKC 277
RR S +R+ R+ G +R + GNK+K A N ++E DS S+ KK
Sbjct: 82 RRRSRSRDRRRSRSRSRGRRSRSSS---PGNKSKK-AENRSRSKEKTDSGESSKEKKKDK 137
Query: 278 FVGKRRFKRNXXXXXXXXXXXXXXXXXXKVEGWRDVKKMGSSASLGKYDMKITKRVPLK- 336
+ +++ +VE WR+ ++ + ++G+ +I + K
Sbjct: 138 DDKEDEKEKDAGNFDQNKLEEEMRKRKERVEKWREEQRKKAMENIGELKKEIEEMKQGKK 197
Query: 337 -SLEDEHDFEEQVELIRKE 354
SLED+ D E+ KE
Sbjct: 198 WSLEDDDDDEDDPAEAEKE 216
>UNIPROTKB|I3LR20 [details] [associations]
symbol:DDX46 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005730 "nucleolus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 OMA:IEEENKF EMBL:FP312757
Ensembl:ENSSSCT00000027801 Uniprot:I3LR20
Length = 1032
Score = 370 (135.3 bits), Expect = 1.3e-33, Sum P(2) = 1.3e-33
Identities = 112/343 (32%), Positives = 166/343 (48%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
K + +CGIS + +L GY + T +Q + A + G+D + AKTG+GK+IAFLLP
Sbjct: 372 KSWVQCGISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMF 431
Query: 439 EAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
++ S + PI V I+ PTRELA QI E K G+ V+ + GGT
Sbjct: 432 RHIMDQRSLEEGE--GPIAV-IMTPTRELALQITKECKKFSKTL-GLRVVCVYGGTGISE 487
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
L+ +I+V TPGR++D + SG L + +VLDEAD + D+GF V I
Sbjct: 488 QIAELKRG-AEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRI 546
Query: 559 VDCLPRRRQSLLFSATMPK--ELVLKREHTYIDTVGLGSVETPVK-IKQSCLVAPHELHF 615
VD + RQ+++FSAT P+ E + +R + V +G ++Q +V E F
Sbjct: 547 VDNVRPDRQTVMFSATFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQQVIVIEEEKKF 606
Query: 616 QILHHLLKEHILGTPDYKVIVFCSTGM-VTSLLYLLLREMKMNVREMYSRKPQLYRDRIS 674
L LL + VI+F LL L+R ++ Q RD I
Sbjct: 607 LKLLELLGHY---QESGSVIIFVDKQEHADGLLKDLMRA-SYPCMSLHGGIDQYDRDSII 662
Query: 675 EEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 717
+F+ +LV + V+ARG+D + VV P E Y+H
Sbjct: 663 NDFKNGTCKLLVATSVAARGLDVKHLILVVNYSCPNHYEDYVH 705
Score = 79 (32.9 bits), Expect = 1.3e-33, Sum P(2) = 1.3e-33
Identities = 34/139 (24%), Positives = 59/139 (42%)
Query: 218 RRAYFSGTDKRNFCRNDGSSTRDKAGFDTGNKAKPFARNLGNNRENGDSKNMSEFMKKKC 277
RR S +R+ R+ G +R + GNK+K A N ++E DS S+ KK
Sbjct: 82 RRRSRSRDRRRSRSRSRGRRSRSSS---PGNKSKK-AENRSRSKEKTDSGESSKEKKKDK 137
Query: 278 FVGKRRFKRNXXXXXXXXXXXXXXXXXXKVEGWRDVKKMGSSASLGKYDMKITKRVPLK- 336
+ +++ +VE WR+ ++ + ++G+ +I + K
Sbjct: 138 DDKEDEKEKDAGNFDQNKLEEEMRKRKERVEKWREEQRKKAMENIGELKKEIEEMKQGKK 197
Query: 337 -SLEDEHDFEEQVELIRKE 354
SLED+ D E+ KE
Sbjct: 198 WSLEDDDDDEDDPAEAEKE 216
>TAIR|locus:504955106 [details] [associations]
symbol:emb1138 "embryo defective 1138" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0009507 "chloroplast"
evidence=ISM;IDA] [GO:0009793 "embryo development ending in seed
dormancy" evidence=NAS] [GO:0009570 "chloroplast stroma"
evidence=IDA] [GO:0016020 "membrane" evidence=IDA] [GO:0009941
"chloroplast envelope" evidence=IDA] InterPro:IPR001650
InterPro:IPR001878 InterPro:IPR011545 InterPro:IPR012562
Pfam:PF00098 Pfam:PF00270 Pfam:PF00271 Pfam:PF08152 PROSITE:PS00039
PROSITE:PS50158 PROSITE:PS51194 SMART:SM00343 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0009570 GO:GO:0016020 GO:GO:0046872 GO:GO:0008270
GO:GO:0009941 GO:GO:0003723 EMBL:AF058914 Gene3D:4.10.60.10
SUPFAM:SSF57756 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268805 UniGene:At.23875 EMBL:AJ010457 EMBL:AC137518
EMBL:AY080625 EMBL:AY091068 EMBL:AY094485 EMBL:AY123000
EMBL:AY128278 EMBL:BT000713 EMBL:BT002289 EMBL:BT002456
EMBL:AY102126 EMBL:BT004533 EMBL:AK229821 IPI:IPI00523172
IPI:IPI00656967 PIR:T01202 PIR:T51738 RefSeq:NP_001031943.1
RefSeq:NP_680225.2 UniGene:At.66764 ProteinModelPortal:Q8L7S8
SMR:Q8L7S8 STRING:Q8L7S8 PaxDb:Q8L7S8 PRIDE:Q8L7S8
EnsemblPlants:AT5G26742.2 GeneID:832713 KEGG:ath:AT5G26742
GeneFarm:1570 TAIR:At5g26742 InParanoid:Q8L7S8 OMA:ISHEQGW
PhylomeDB:Q8L7S8 ProtClustDB:CLSN2680279 Genevestigator:Q8L7S8
Uniprot:Q8L7S8
Length = 748
Score = 395 (144.1 bits), Expect = 1.3e-33, P = 1.3e-33
Identities = 115/350 (32%), Positives = 180/350 (51%)
Query: 382 DECGISPLTI-----KALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLP 436
+E IS L++ ++L G + +Q A L L+G+D + +AKTGTGK++AF +P
Sbjct: 100 EELAISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIP 159
Query: 437 AIEAVLKATSSST----TQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVG 492
I+ + + T + +P L+L PTRELA Q+ E + ++ + + + G
Sbjct: 160 IIKRLTEEAGDYTAFRRSGRLPKF--LVLAPTRELAKQVEKE---IKESAPYLSTVCVYG 214
Query: 493 GTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFR 552
G + + Q L ++V TPGR++D IE G S++L ++ LVLDEAD +L +GF
Sbjct: 215 GVSYTIQQSALTRG-VDVVVGTPGRIIDLIE---GRSLKLGEVEYLVLDEADQMLAVGFE 270
Query: 553 KDVENIVDCLPRRRQSLLFSATMP---KELVLKR--EHTYIDTVGLGSVETPVKIKQSCL 607
+ VE+I++ LP +RQS+LFSATMP K+L K ID VG + IK +
Sbjct: 271 EAVESILENLPTKRQSMLFSATMPTWVKKLARKYLDNPLNIDLVGDQDEKLAEGIKLYAI 330
Query: 608 VAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQ 667
IL L+ + G K IVF T + L L + ++ Q
Sbjct: 331 ATTSTSKRTILSDLITVYAKGG---KTIVFTQTKRDADEVSLALSN-SIATEALHGDISQ 386
Query: 668 LYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 717
R+R FR K +LV +DV++RG+D P+V V+ +P D E ++H
Sbjct: 387 HQRERTLNAFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVH 436
>MGI|MGI:102670 [details] [associations]
symbol:Ddx4 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 4"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=ISO;IDA] [GO:0007141 "male meiosis I" evidence=IMP]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IMP] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0030317 "sperm motility"
evidence=ISO] [GO:0030529 "ribonucleoprotein complex" evidence=IDA]
[GO:0032880 "regulation of protein localization" evidence=IMP]
[GO:0033391 "chromatoid body" evidence=ISO;IDA] [GO:0044464 "cell
part" evidence=IDA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0071546 "pi-body" evidence=IDA] [GO:0071547
"piP-body" evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 MGI:MGI:102670 GO:GO:0007275
GO:GO:0005524 GO:GO:0005634 GO:GO:0048471 GO:GO:0032880
GO:GO:0007283 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0071546 GO:GO:0033391 GO:GO:0007141
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 HOGENOM:HOG000268804
HOVERGEN:HBG015893 CTD:54514 KO:K13982 GO:GO:0071547 GO:GO:0000237
EMBL:AK014844 EMBL:D14859 IPI:IPI00121394 RefSeq:NP_034159.1
UniGene:Mm.12818 ProteinModelPortal:Q61496 SMR:Q61496 STRING:Q61496
PhosphoSite:Q61496 REPRODUCTION-2DPAGE:IPI00121394
REPRODUCTION-2DPAGE:Q61496 PaxDb:Q61496 PRIDE:Q61496
Ensembl:ENSMUST00000075748 GeneID:13206 KEGG:mmu:13206
UCSC:uc007rwm.2 ChiTaRS:DDX4 NextBio:283368 Bgee:Q61496
CleanEx:MM_DDX4 Genevestigator:Q61496 GermOnline:ENSMUSG00000021758
Uniprot:Q61496
Length = 702
Score = 394 (143.8 bits), Expect = 1.3e-33, P = 1.3e-33
Identities = 109/350 (31%), Positives = 186/350 (53%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F+E + + AGY ++T VQ+ ++ L G+D + A+TG+GK+ AFLLP +
Sbjct: 263 FEEANLCQTLNNNIAKAGYTKLTPVQKYSIPIVLAGRDLMACAQTGSGKTAAFLLPILAH 322
Query: 441 VLK--ATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
+++ T+S +L P +I+ PTREL +QI EA + + + GGT+F
Sbjct: 323 MMRDGITASRFKELQEP-ECIIVAPTRELINQIYLEA-RKFSFGTCVRAVVIYGGTQFGH 380
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
R++ C IL ATPGRL+D I + + L +K LVLDEAD +LD+GF +++ +
Sbjct: 381 SVRQIVQG-CNILCATPGRLMDIIGKEK---IGLKQVKYLVLDEADRMLDMGFGPEMKKL 436
Query: 559 VDC--LPRR--RQSLLFSATMPKEL------VLKREHTYIDTVGLGSVETPVK-IKQSCL 607
+ C +P + RQ+LLFSAT P+E+ LK + + V +G V + ++Q+ L
Sbjct: 437 ISCPGMPSKEQRQTLLFSATFPEEIQRLAGDFLKSSYLF---VAVGQVGGACRDVQQTIL 493
Query: 608 VAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQ 667
+ L +L+ +G D + +VF T + L + K++ ++ + Q
Sbjct: 494 QVGQYSKREKLVEILRN--IG--DERTMVFVETKKKADFIATFLCQEKISTTSIHGDREQ 549
Query: 668 LYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 717
R++ +FR K +LV + V+ARG+D +V V+ +P ++Y+H
Sbjct: 550 REREQALGDFRCGKCPVLVATSVAARGLDIENVQHVINFDLPSTIDEYVH 599
>RGD|1308793 [details] [associations]
symbol:Ddx4 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 4"
species:10116 "Rattus norvegicus" [GO:0000237 "leptotene"
evidence=IEA;ISO] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=ISO;ISS]
[GO:0007141 "male meiosis I" evidence=IEA;ISO] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA;ISO] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0030317 "sperm motility"
evidence=IEA;ISO] [GO:0030529 "ribonucleoprotein complex"
evidence=ISO] [GO:0032880 "regulation of protein localization"
evidence=IEA;ISO] [GO:0033391 "chromatoid body" evidence=IEA;ISO]
[GO:0044464 "cell part" evidence=ISO] [GO:0048471 "perinuclear
region of cytoplasm" evidence=IEA;ISO] [GO:0071546 "pi-body"
evidence=ISO;ISS] [GO:0071547 "piP-body" evidence=ISO;ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 RGD:1308793 GO:GO:0007275 GO:GO:0005524 GO:GO:0005634
GO:GO:0048471 GO:GO:0032880 GO:GO:0007283 GO:GO:0003676
GO:GO:0030317 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0071546 GO:GO:0033391 GO:GO:0007141 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG015893 CTD:54514 KO:K13982 OrthoDB:EOG4W6NVF
GO:GO:0071547 GO:GO:0000237 EMBL:S75275 IPI:IPI00208943 PIR:JC2534
RefSeq:NP_001071115.1 UniGene:Rn.198577 ProteinModelPortal:Q64060
SMR:Q64060 STRING:Q64060 PRIDE:Q64060 GeneID:310090 KEGG:rno:310090
NextBio:661610 Genevestigator:Q64060 Uniprot:Q64060
Length = 713
Score = 394 (143.8 bits), Expect = 1.4e-33, P = 1.4e-33
Identities = 111/348 (31%), Positives = 186/348 (53%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F+E + + AGY ++T VQ+ ++ L G+D + A+TG+GK+ AFLLP +
Sbjct: 275 FEEANLCQTLNNNIAKAGYTKLTPVQKYSIPIVLAGRDLMACAQTGSGKTAAFLLPILAH 334
Query: 441 VLK--ATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
+++ T+S +L P +I+ PTREL +QI EA + + + GGT+F
Sbjct: 335 MMRDGITASRFKELQEP-ECIIVAPTRELINQIYLEA-RKFSFGTCVRAVVIYGGTQFGH 392
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
R++ C IL ATPGRL+D I + + L +K LVLDEAD +LD+GF +++ +
Sbjct: 393 SIRQIVQG-CNILCATPGRLMDIIGKEK---IGLKQVKYLVLDEADRMLDMGFGPEMKKL 448
Query: 559 VDC--LPRR--RQSLLFSATMPKELV-LKREH---TYIDTVGLGSVETPVK-IKQSCLVA 609
+ C +P + RQ+LLFSAT P+E+ L E Y+ V +G V + ++QS L
Sbjct: 449 ISCPGMPSKEQRQTLLFSATFPEEIQRLAGEFLKSNYL-FVAVGQVGGACRDVQQSILQV 507
Query: 610 PHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLY 669
+ L +L+ +G D + +VF T + L + K++ ++ + Q
Sbjct: 508 GPVFKKRKLVEILRN--IG--DERPMVFVETKKKADFIATFLCQEKISTTSIHGDREQRE 563
Query: 670 RDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 717
R++ +FR K +LV + V+ARG+D +V V+ +P ++Y+H
Sbjct: 564 REQALGDFRCGKCPVLVATSVAARGLDIENVQHVINFNLPSTIDEYVH 611
>UNIPROTKB|Q64060 [details] [associations]
symbol:Ddx4 "Probable ATP-dependent RNA helicase DDX4"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 RGD:1308793 GO:GO:0007275 GO:GO:0005524 GO:GO:0005634
GO:GO:0048471 GO:GO:0032880 GO:GO:0007283 GO:GO:0003676
GO:GO:0030317 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0071546 GO:GO:0033391 GO:GO:0007141 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG015893 CTD:54514 KO:K13982 OrthoDB:EOG4W6NVF
GO:GO:0071547 GO:GO:0000237 EMBL:S75275 IPI:IPI00208943 PIR:JC2534
RefSeq:NP_001071115.1 UniGene:Rn.198577 ProteinModelPortal:Q64060
SMR:Q64060 STRING:Q64060 PRIDE:Q64060 GeneID:310090 KEGG:rno:310090
NextBio:661610 Genevestigator:Q64060 Uniprot:Q64060
Length = 713
Score = 394 (143.8 bits), Expect = 1.4e-33, P = 1.4e-33
Identities = 111/348 (31%), Positives = 186/348 (53%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F+E + + AGY ++T VQ+ ++ L G+D + A+TG+GK+ AFLLP +
Sbjct: 275 FEEANLCQTLNNNIAKAGYTKLTPVQKYSIPIVLAGRDLMACAQTGSGKTAAFLLPILAH 334
Query: 441 VLK--ATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
+++ T+S +L P +I+ PTREL +QI EA + + + GGT+F
Sbjct: 335 MMRDGITASRFKELQEP-ECIIVAPTRELINQIYLEA-RKFSFGTCVRAVVIYGGTQFGH 392
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
R++ C IL ATPGRL+D I + + L +K LVLDEAD +LD+GF +++ +
Sbjct: 393 SIRQIVQG-CNILCATPGRLMDIIGKEK---IGLKQVKYLVLDEADRMLDMGFGPEMKKL 448
Query: 559 VDC--LPRR--RQSLLFSATMPKELV-LKREH---TYIDTVGLGSVETPVK-IKQSCLVA 609
+ C +P + RQ+LLFSAT P+E+ L E Y+ V +G V + ++QS L
Sbjct: 449 ISCPGMPSKEQRQTLLFSATFPEEIQRLAGEFLKSNYL-FVAVGQVGGACRDVQQSILQV 507
Query: 610 PHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLY 669
+ L +L+ +G D + +VF T + L + K++ ++ + Q
Sbjct: 508 GPVFKKRKLVEILRN--IG--DERPMVFVETKKKADFIATFLCQEKISTTSIHGDREQRE 563
Query: 670 RDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 717
R++ +FR K +LV + V+ARG+D +V V+ +P ++Y+H
Sbjct: 564 REQALGDFRCGKCPVLVATSVAARGLDIENVQHVINFNLPSTIDEYVH 611
>UNIPROTKB|Q9KV52 [details] [associations]
symbol:rhlB "ATP-dependent RNA helicase RhlB"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0006401 "RNA catabolic process" evidence=ISS] HAMAP:MF_00661
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR023554 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0003723 GO:GO:0006401
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 OMA:EEEWPEK
KO:K03732 ProtClustDB:PRK04837 PIR:C82340 RefSeq:NP_229960.1
ProteinModelPortal:Q9KV52 DNASU:2614975 GeneID:2614975
KEGG:vch:VC0305 PATRIC:20079655 Uniprot:Q9KV52
Length = 438
Score = 373 (136.4 bits), Expect = 1.5e-33, P = 1.5e-33
Identities = 106/347 (30%), Positives = 171/347 (49%)
Query: 376 LSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLL 435
+++ +F + G+ P I L G++ T +Q L L G+D +A+TGTGK++AFL
Sbjct: 6 ITEHKFADFGLQPQVIDGLEKKGFVYCTPIQALALPVLLSGQDIAGQAQTGTGKTLAFLT 65
Query: 436 PAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTR 495
+L ++ P +I+ PTRELA QI +A LL + G+ GG
Sbjct: 66 ATFNHLLTTPAAEGRAETQP-RAIIMAPTRELAIQIFNDAEPLLAS-TGLKAALAYGGES 123
Query: 496 FKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDV 555
+ +L+S IL+ T GR++D + + L ++ +VLDEAD + DLGF KD+
Sbjct: 124 YDKQLAKLQSG-VDILIGTTGRIIDFYKQRV---FNLNHIQAVVLDEADRMFDLGFIKDI 179
Query: 556 ENIVDCLP--RRRQSLLFSATMP---KELVLKREHTYIDTVGLGSVETPVKIKQSCLVAP 610
+ +P + R ++LFSAT+ +EL + + V +T +I++
Sbjct: 180 RFLFRRMPEPKDRLNMLFSATLSYRVQELAFEHMNNPEHVVVEPEQKTGHRIQEELFYPS 239
Query: 611 HELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYR 670
+E +L L++E PD + I+F +T ++ L V + PQ R
Sbjct: 240 NEHKMALLQTLIEEE---WPD-RAIIFANTKHRCEQIWAHLAADNHRVGLLTGDVPQKKR 295
Query: 671 DRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 717
+RI E+F ILV +DV+ARG+ P VT V +P D E Y+H
Sbjct: 296 ERILEQFTQGDVDILVATDVAARGLHIPQVTHVFNYDLPDDCEDYVH 342
>TIGR_CMR|VC_0305 [details] [associations]
symbol:VC_0305 "ATP-dependent RNA helicase RhlB"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0006401
"RNA catabolic process" evidence=ISS] HAMAP:MF_00661
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR023554 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0003723 GO:GO:0006401
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 OMA:EEEWPEK
KO:K03732 ProtClustDB:PRK04837 PIR:C82340 RefSeq:NP_229960.1
ProteinModelPortal:Q9KV52 DNASU:2614975 GeneID:2614975
KEGG:vch:VC0305 PATRIC:20079655 Uniprot:Q9KV52
Length = 438
Score = 373 (136.4 bits), Expect = 1.5e-33, P = 1.5e-33
Identities = 106/347 (30%), Positives = 171/347 (49%)
Query: 376 LSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLL 435
+++ +F + G+ P I L G++ T +Q L L G+D +A+TGTGK++AFL
Sbjct: 6 ITEHKFADFGLQPQVIDGLEKKGFVYCTPIQALALPVLLSGQDIAGQAQTGTGKTLAFLT 65
Query: 436 PAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTR 495
+L ++ P +I+ PTRELA QI +A LL + G+ GG
Sbjct: 66 ATFNHLLTTPAAEGRAETQP-RAIIMAPTRELAIQIFNDAEPLLAS-TGLKAALAYGGES 123
Query: 496 FKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDV 555
+ +L+S IL+ T GR++D + + L ++ +VLDEAD + DLGF KD+
Sbjct: 124 YDKQLAKLQSG-VDILIGTTGRIIDFYKQRV---FNLNHIQAVVLDEADRMFDLGFIKDI 179
Query: 556 ENIVDCLP--RRRQSLLFSATMP---KELVLKREHTYIDTVGLGSVETPVKIKQSCLVAP 610
+ +P + R ++LFSAT+ +EL + + V +T +I++
Sbjct: 180 RFLFRRMPEPKDRLNMLFSATLSYRVQELAFEHMNNPEHVVVEPEQKTGHRIQEELFYPS 239
Query: 611 HELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYR 670
+E +L L++E PD + I+F +T ++ L V + PQ R
Sbjct: 240 NEHKMALLQTLIEEE---WPD-RAIIFANTKHRCEQIWAHLAADNHRVGLLTGDVPQKKR 295
Query: 671 DRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 717
+RI E+F ILV +DV+ARG+ P VT V +P D E Y+H
Sbjct: 296 ERILEQFTQGDVDILVATDVAARGLHIPQVTHVFNYDLPDDCEDYVH 342
>TAIR|locus:2035741 [details] [associations]
symbol:RH20 "RNA helicase 20" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA;ISS]
[GO:0005829 "cytosol" evidence=IDA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0000184 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823
EMBL:AC073944 EMBL:AY062745 EMBL:AY128786 EMBL:AJ010470
IPI:IPI00528901 PIR:B96593 PIR:T51345 RefSeq:NP_175911.1
UniGene:At.20425 ProteinModelPortal:Q9C718 SMR:Q9C718 PaxDb:Q9C718
PRIDE:Q9C718 ProMEX:Q9C718 EnsemblPlants:AT1G55150.1 GeneID:841958
KEGG:ath:AT1G55150 GeneFarm:937 TAIR:At1g55150 InParanoid:Q9C718
OMA:CANHNIL PhylomeDB:Q9C718 ProtClustDB:CLSN2682455
Genevestigator:Q9C718 GermOnline:AT1G55150 Uniprot:Q9C718
Length = 501
Score = 373 (136.4 bits), Expect = 1.5e-33, P = 1.5e-33
Identities = 111/343 (32%), Positives = 173/343 (50%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
K F + G ++ + AG+ + T +Q ++G+D + A+TG+GK++++LLPAI
Sbjct: 99 KSFRDVGFPDYVLEEVKKAGFTEPTPIQSQGWPMAMKGRDLIGIAETGSGKTLSYLLPAI 158
Query: 439 EAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
V + PI VL+L PTRELA QI EA + + I + GG
Sbjct: 159 VHVNAQPMLAHGD--GPI-VLVLAPTRELAVQIQQEA-SKFGSSSKIKTTCIYGGVPKGP 214
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
R L+ +I++ATPGRL+D +E+ + L + LVLDEAD +LD+GF + I
Sbjct: 215 QVRDLQKG-VEIVIATPGRLIDMMESNN---TNLRRVTYLVLDEADRMLDMGFDPQIRKI 270
Query: 559 VDCLPRRRQSLLFSATMPKELV-LKREHTYID-TVGLGSVETPVK--IKQSCLVAPHELH 614
V + RQ+L +SAT PKE+ L ++ Y V +GS + I+Q V
Sbjct: 271 VSHIRPDRQTLYWSATWPKEVEQLSKKFLYNPYKVIIGSSDLKANRAIRQIVDVISESQK 330
Query: 615 FQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRIS 674
+ L LL++ + G+ +++VF T + LR ++ K Q RD +
Sbjct: 331 YNKLVKLLEDIMDGS---RILVFLDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVL 387
Query: 675 EEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 717
EFR+ K I+ +DV+ARG+D DV V+ P E Y+H
Sbjct: 388 SEFRSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVH 430
>WB|WBGene00010260 [details] [associations]
symbol:F58E10.3 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040010 "positive regulation of
growth rate" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0009792 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823
GeneTree:ENSGT00660000095174 HSSP:P10081 EMBL:Z81555 PIR:T22917
RefSeq:NP_001041134.1 ProteinModelPortal:Q9XUW5 SMR:Q9XUW5
STRING:Q9XUW5 PaxDb:Q9XUW5 PRIDE:Q9XUW5 EnsemblMetazoa:F58E10.3a.1
EnsemblMetazoa:F58E10.3a.2 EnsemblMetazoa:F58E10.3a.3
EnsemblMetazoa:F58E10.3a.4 EnsemblMetazoa:F58E10.3a.5 GeneID:179897
KEGG:cel:CELE_F58E10.3 UCSC:F58E10.3a.1 CTD:179897
WormBase:F58E10.3a InParanoid:Q9XUW5 OMA:YVLQEIT NextBio:907314
ArrayExpress:Q9XUW5 Uniprot:Q9XUW5
Length = 561
Score = 387 (141.3 bits), Expect = 1.7e-33, P = 1.7e-33
Identities = 111/340 (32%), Positives = 172/340 (50%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F+E + P I L + + T +Q + + G+D + AKTG+GK++AF+LPA+
Sbjct: 132 FNEAPL-PGQIHELLYGKFQKPTVIQSISWPIAMSGRDIISIAKTGSGKTLAFMLPALVH 190
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+ K + P VL+L PTRELA Q+ +I + G+ + L GG
Sbjct: 191 ITKQAHRQRGE--GPA-VLVLLPTRELAQQVQEVSIDFCHSL-GLKMTCLFGGASKGPQA 246
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
R LE I+VATPGRLLD ++N G + + LVLDEAD +LD+GF ++ I+
Sbjct: 247 RDLERG-VDIVVATPGRLLDFLDN--G-TTNMKKCSYLVLDEADRMLDMGFEPQIKKIIG 302
Query: 561 CLPRRRQSLLFSATMPKELVLKREHTYIDT--VGLGSVETPVKIKQSCLVAPHELHFQIL 618
+ RQ+L+FSAT PKE+ D + +GS+E + +V E H +
Sbjct: 303 QIRPDRQTLMFSATWPKEVRALASDFQKDAAFLNVGSLELAANHNITQVVDILEEHAKQA 362
Query: 619 HHL-LKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEF 677
+ L HI+ + K I+F T L +R ++ K Q RD + +EF
Sbjct: 363 KLMELLNHIMNQKECKTIIFVETKRKADELTRAMRRDGWPTLCIHGDKNQGERDWVLQEF 422
Query: 678 RASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 717
+A K I++ +DV+ARG+D D+ V+ P + E Y+H
Sbjct: 423 KAGKTPIMLATDVAARGLDVDDIKFVINYDYPNNSEDYVH 462
>UNIPROTKB|F1NQV5 [details] [associations]
symbol:DDX27 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00550000074997 EMBL:AADN02019007 IPI:IPI00579774
Ensembl:ENSGALT00000039062 ArrayExpress:F1NQV5 Uniprot:F1NQV5
Length = 758
Score = 394 (143.8 bits), Expect = 1.8e-33, P = 1.8e-33
Identities = 113/344 (32%), Positives = 175/344 (50%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F + +S +KA+TA G+ Q T +Q+A + L GKD A TGTGK+ AF+LP +E
Sbjct: 182 FQDMNLSRPLLKAITALGFKQPTPIQKACIPVGLLGKDICACAATGTGKTAAFILPVLER 241
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
++ + P VL+L PTREL Q+ + L + VGG K +
Sbjct: 242 LIYKPRQA-----PITRVLVLVPTRELGIQVHS-VTKQLAQFSSVTTCLAVGGLDVKTQE 295
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
L S P IL+ATPGRL+DH+ N S L +++L+LDEAD +LD F + ++ I+
Sbjct: 296 AALRSGP-DILIATPGRLIDHLHNCP--SFHLSSVEVLILDEADRMLDEYFEEQMKEIIR 352
Query: 561 CLPRRRQSLLFSATMPKEL-----VLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHF 615
R RQ++LFSATM +E+ V + T I V + P ++ + P+
Sbjct: 353 LCSRHRQTMLFSATMTEEVKDLASVSLKNPTRI-FVNSNTDVAPFLRQEFIRIRPNREGD 411
Query: 616 Q--ILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRI 673
+ I+ LL PD+ V++F T +++LL M + V E++ Q R
Sbjct: 412 REAIVSALLTRTF---PDH-VMLFTQTKKQAHRMHILLGLMGLRVGELHGNLSQAQRLEA 467
Query: 674 SEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 717
F+ + ILV +DV+ARG+D V +V+ +P + Y+H
Sbjct: 468 LRRFKDEQIDILVATDVAARGLDIEGVKTVINFTMPNTTKHYVH 511
>UNIPROTKB|A4QSS5 [details] [associations]
symbol:DBP2 "ATP-dependent RNA helicase DBP2"
species:242507 "Magnaporthe oryzae 70-15" [GO:0043581 "mycelium
development" evidence=IEP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0000184 EMBL:CM001233 GO:GO:0003723
GO:GO:0043581 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 OrthoDB:EOG47SWP6 RefSeq:XP_003712846.1
ProteinModelPortal:A4QSS5 EnsemblFungi:MGG_16901T0 GeneID:12985738
KEGG:mgr:MGG_16901 Uniprot:A4QSS5
Length = 548
Score = 385 (140.6 bits), Expect = 2.0e-33, P = 2.0e-33
Identities = 116/347 (33%), Positives = 178/347 (51%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
FDE G + + A G+ T +Q L G+D V A+TG+GK++ + LPAI
Sbjct: 127 FDEAGFPRYVMDEVKAQGFPAPTAIQSQGWPMALSGRDVVGIAETGSGKTLTYCLPAIVH 186
Query: 441 VLKATSSSTTQLVP---PIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFK 497
+ ++ L P PI VLIL PTRELA QI AE I+ I + GG K
Sbjct: 187 I-----NAQPLLAPGDGPI-VLILAPTRELAVQIQAE-ISKFGKSSRIRNTCVYGGVP-K 238
Query: 498 VDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVEN 557
Q R S ++ +ATPGRL+D +E SG L + LVLDEAD +LD+GF +
Sbjct: 239 GPQIRDLSRGVEVCIATPGRLIDMLE--SG-KTNLRRVTYLVLDEADRMLDMGFEPQIRK 295
Query: 558 IVDCLPRRRQSLLFSATMPKELVLKREHTYID--TVGLGSVETPV--KIKQSC-LVAPHE 612
I+ + RQ+L++SAT PKE+ D V +GS++ +I Q +V+ E
Sbjct: 296 IIGQIRPDRQTLMWSATWPKEVRNMAADFLQDFIQVNIGSLDLSANHRITQIVEVVSESE 355
Query: 613 LHFQILHHLLKEHILGTPDYK--VIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYR 670
+++ H+ E ++ D K +++F T V + LR+ ++ K Q R
Sbjct: 356 KRDRMIRHM--EKVMDGKDSKNKILIFVGTKRVADEITRFLRQDGWPALSIHGDKQQNER 413
Query: 671 DRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 717
D + ++F+ K I+V +DV++RG+D ++T V+ P + E YIH
Sbjct: 414 DWVLDQFKTGKSPIMVATDVASRGIDVRNITHVLNYDYPNNSEDYIH 460
>UNIPROTKB|F1RFL5 [details] [associations]
symbol:DDX55 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959
CTD:57696 KO:K14809 GeneTree:ENSGT00550000074969 OMA:CACVEYW
EMBL:CU468658 RefSeq:XP_001927747.2 UniGene:Ssc.4554
UniGene:Ssc.95961 Ensembl:ENSSSCT00000010713 GeneID:100157342
KEGG:ssc:100157342 Uniprot:F1RFL5
Length = 600
Score = 389 (142.0 bits), Expect = 2.0e-33, P = 2.0e-33
Identities = 116/371 (31%), Positives = 177/371 (47%)
Query: 386 ISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKAT 445
+ P + L G+ MT VQ AT+ ++ KD +A TG+GK++AF++P +E +L+
Sbjct: 16 LHPRVLDVLQELGFPYMTPVQSATIPLFMKNKDVAAEAVTGSGKTLAFVIPILEILLRRE 75
Query: 446 SSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLES 505
V I I+ PTRELA QI K + +GG D R +
Sbjct: 76 EKLKKSQVGAI---IITPTRELAVQIDEVLSHFTKPFPQFSQILWIGGRNPGEDVARFKE 132
Query: 506 DPCQILVATPGRLLDHIENKS-GLSVR--LMGLKMLVLDEADHLLDLGFRKDVENIVDCL 562
I+VATPGRL D K+ GL + + L +LVLDEAD LLD+GF + I++ L
Sbjct: 133 HGGNIIVATPGRLEDMFRRKAEGLDLASCVKSLDVLVLDEADRLLDMGFEASINTILEFL 192
Query: 563 PRRRQSLLFSATMPKEL--VLK---REHTYIDTVGLGSV-----ETPVKIKQSCLVAPHE 612
P++R++ LFSAT +E+ +++ R I G+ +TP +++ +V +
Sbjct: 193 PKQRRTGLFSATQTQEVENLVRAGLRNPVRISVKEKGAAASSTQKTPSRLENYYMVCKAD 252
Query: 613 LHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLY-RD 671
F L H L+ H K +VF ST L + +V+ M Y R+
Sbjct: 253 EKFNQLVHFLRNH----KQEKHLVFFSTCACVEYYGKALEALVRSVKIMCIHGKMKYKRN 308
Query: 672 RISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXXXXXXX 731
+I EFR + ILV +DV ARG+D P+V V+Q P ++H
Sbjct: 309 KIFMEFRQLQSGILVCTDVMARGIDIPEVNWVLQYDPPSSASAFVHRCGRTARIGHGGSA 368
Query: 732 VLLLAPWEEYF 742
++ L P EE +
Sbjct: 369 LVFLLPMEESY 379
>CGD|CAL0003204 [details] [associations]
symbol:DBP2 species:5476 "Candida albicans" [GO:0005730
"nucleolus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 CGD:CAL0003204 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0000184 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 EMBL:AACQ01000245
EMBL:AACQ01000246 RefSeq:XP_710694.1 RefSeq:XP_710708.1
ProteinModelPortal:Q59LU0 PRIDE:Q59LU0 GeneID:3647692
GeneID:3647705 KEGG:cal:CaO19.171 KEGG:cal:CaO19.7804 KO:K12823
Uniprot:Q59LU0
Length = 562
Score = 386 (140.9 bits), Expect = 2.3e-33, P = 2.3e-33
Identities = 115/342 (33%), Positives = 172/342 (50%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
FDE G ++ + G+ + T +Q L G+D + A TG+GK++++ LP+I
Sbjct: 129 FDEAGFPDYVLQEVKDQGFPKPTPIQCQGWPMALSGRDMIGIAATGSGKTLSYCLPSIVH 188
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+ + Q VL+L PTRELA QI E K+ I + GG K Q
Sbjct: 189 I---NAQPQLQYGDGPIVLVLAPTRELAVQIQTECSKFGKS-SRIRNTCVYGGAP-KGPQ 243
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
R + +I +ATPGRL+D +E +G L + LVLDEAD +LD+GF + IVD
Sbjct: 244 IRDLARGVEICIATPGRLIDMLE--AG-KTNLKRVTYLVLDEADRMLDMGFEPQIRKIVD 300
Query: 561 CLPRRRQSLLFSATMPKELVLKREHTYIDT---VGLGSVETPVKIKQSCLVAPHELHFQI 617
+ RQ+L++SAT PKE V + Y++ V +GS+E + LV + F
Sbjct: 301 QIRPDRQTLMWSATWPKE-VQQLTRDYLNDPIQVTIGSLELAASHTITQLVEVID-EFSK 358
Query: 618 LHHLLK--EHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISE 675
L+K E L D K++VF ST + LR ++ K Q RD + +
Sbjct: 359 RDRLVKHLESALNEKDNKILVFASTKRTCDEITTYLRSDGWPALAIHGDKEQNERDWVLD 418
Query: 676 EFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 717
EFR K I+V +DV+ARG+D +T V+ +P + E Y+H
Sbjct: 419 EFRKGKTSIMVATDVAARGIDVKGITHVINYDMPGNIEDYVH 460
>POMBASE|SPBP8B7.16c [details] [associations]
symbol:dbp2 "ATP-dependent RNA helicase Dbp2"
species:4896 "Schizosaccharomyces pombe" [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=ISO] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0005524 "ATP binding" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006364 "rRNA processing" evidence=ISO] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 PomBase:SPBP8B7.16c
GO:GO:0005829 GO:GO:0005524 GO:GO:0005730 GO:GO:0000184
EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 KO:K12823 OMA:IDAMSGY OrthoDB:EOG47SWP6
EMBL:X52648 EMBL:L11574 PIR:T40810 RefSeq:NP_596523.1
ProteinModelPortal:P24782 IntAct:P24782 STRING:P24782 PRIDE:P24782
EnsemblFungi:SPBP8B7.16c.1 GeneID:2541383 KEGG:spo:SPBP8B7.16c
NextBio:20802492 Uniprot:P24782
Length = 550
Score = 384 (140.2 bits), Expect = 2.9e-33, P = 2.9e-33
Identities = 128/409 (31%), Positives = 192/409 (46%)
Query: 317 GSSASLGKYDMKITKRVPLKSLEDEHDFEEQVELIRK----EISXXXXXXXXXXXXXXXX 372
G A+L K D K +P + DF ++ E +R E++
Sbjct: 64 GPGANLVKKDWKNETLIPFQK-----DFYKEHENVRNRSDAEVTEYRKEKEIVVHGLNVP 118
Query: 373 XPILSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIA 432
P+ + F+E G +K + G+ T +Q+ + G+D V + TG+GK+++
Sbjct: 119 KPVTT---FEEAGFPNYVLKEVKQLGFEAPTPIQQQAWPMAMSGRDMVGISATGSGKTLS 175
Query: 433 FLLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVG 492
+ LPAI + S PI VL+L PTRELA QI E K+ I + G
Sbjct: 176 YCLPAIVHINAQPLLSPGD--GPI-VLVLAPTRELAVQIQQECTKFGKS-SRIRNTCVYG 231
Query: 493 GTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFR 552
G R L +I +ATPGRLLD +++ L + LVLDEAD +LD+GF
Sbjct: 232 GVPRGPQIRDLIRG-VEICIATPGRLLDMLDSNK---TNLRRVTYLVLDEADRMLDMGFE 287
Query: 553 KDVENIVDCLPRRRQSLLFSATMPKELV-LKREHT--YID-TVGLGSVETPVKIKQSCLV 608
+ IVD + RQ+++FSAT PKE+ L R++ YI TVG + IKQ V
Sbjct: 288 PQIRKIVDQIRPDRQTVMFSATWPKEVQRLARDYLNDYIQVTVGSLDLAASHNIKQIVEV 347
Query: 609 APHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQL 668
+ L ++E +L D KV++F T V + LR+ ++ K Q
Sbjct: 348 VDNADKRARLGKDIEE-VLKDRDNKVLIFTGTKRVADDITRFLRQDGWPALAIHGDKAQD 406
Query: 669 YRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 717
RD + EFR K I+V +DV++RG+D +T V P + E Y+H
Sbjct: 407 ERDWVLNEFRTGKSPIMVATDVASRGIDVKGITHVFNYDFPGNTEDYVH 455
>UNIPROTKB|Q8EBV7 [details] [associations]
symbol:SO_3388 "ATP-dependent RNA helicase DEAD box family"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
RefSeq:NP_718942.1 ProteinModelPortal:Q8EBV7 GeneID:1171066
KEGG:son:SO_3388 PATRIC:23526456 OMA:SHLVRSK ProtClustDB:CLSK907144
Uniprot:Q8EBV7
Length = 409
Score = 370 (135.3 bits), Expect = 3.3e-33, P = 3.3e-33
Identities = 101/340 (29%), Positives = 169/340 (49%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F ++ + L GY Q T +Q + A L +D + A+TGTGK+ AF LP ++
Sbjct: 3 FSALSLNTQLVDTLAELGYQQPTPIQVEAIPAILTKQDVMAGAQTGTGKTAAFALPILQ- 61
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+L A + S I L+L PTRELA Q+ + K D I V GG + Q
Sbjct: 62 LLMADNQSD-HAAKAIRALVLVPTRELALQVQQSFVKYAKGTD-IRVGIAYGGVSIEAQQ 119
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
+ +L+ATPGRLLDH+ + G ++ L L LV DEAD +LD+GF +++ ++
Sbjct: 120 AVFNAG-IDVLIATPGRLLDHL--RQG-ALNLNQLNTLVFDEADRMLDMGFMDEIQAVLK 175
Query: 561 CLPRRRQSLLFSATMPKELVLKREHTYIDTVGLGSVE---TPVKIKQSCLVAPHELHFQI 617
+P +RQ+LLFSAT+ + ++ D + + T +I+Q + +
Sbjct: 176 QVPAQRQTLLFSATLDDSIFSFSKNLLRDPKRIEVAKPNTTAAQIEQRVYAIDSDRKTEF 235
Query: 618 LHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEF 677
+ HL++ +V++F T L L ++ + + + Q R+++ +EF
Sbjct: 236 VSHLVRSKNW----QQVLIFSRTKQGVDKLTAQLNKLGVATQSFHGDLSQGAREKVLQEF 291
Query: 678 RASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 717
+ +LV +DV+ARG+D ++ V+ +P E YIH
Sbjct: 292 KQGLVQVLVATDVAARGLDIAELQYVINFELPFIAEDYIH 331
>TIGR_CMR|SO_3388 [details] [associations]
symbol:SO_3388 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
RefSeq:NP_718942.1 ProteinModelPortal:Q8EBV7 GeneID:1171066
KEGG:son:SO_3388 PATRIC:23526456 OMA:SHLVRSK ProtClustDB:CLSK907144
Uniprot:Q8EBV7
Length = 409
Score = 370 (135.3 bits), Expect = 3.3e-33, P = 3.3e-33
Identities = 101/340 (29%), Positives = 169/340 (49%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F ++ + L GY Q T +Q + A L +D + A+TGTGK+ AF LP ++
Sbjct: 3 FSALSLNTQLVDTLAELGYQQPTPIQVEAIPAILTKQDVMAGAQTGTGKTAAFALPILQ- 61
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+L A + S I L+L PTRELA Q+ + K D I V GG + Q
Sbjct: 62 LLMADNQSD-HAAKAIRALVLVPTRELALQVQQSFVKYAKGTD-IRVGIAYGGVSIEAQQ 119
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
+ +L+ATPGRLLDH+ + G ++ L L LV DEAD +LD+GF +++ ++
Sbjct: 120 AVFNAG-IDVLIATPGRLLDHL--RQG-ALNLNQLNTLVFDEADRMLDMGFMDEIQAVLK 175
Query: 561 CLPRRRQSLLFSATMPKELVLKREHTYIDTVGLGSVE---TPVKIKQSCLVAPHELHFQI 617
+P +RQ+LLFSAT+ + ++ D + + T +I+Q + +
Sbjct: 176 QVPAQRQTLLFSATLDDSIFSFSKNLLRDPKRIEVAKPNTTAAQIEQRVYAIDSDRKTEF 235
Query: 618 LHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEF 677
+ HL++ +V++F T L L ++ + + + Q R+++ +EF
Sbjct: 236 VSHLVRSKNW----QQVLIFSRTKQGVDKLTAQLNKLGVATQSFHGDLSQGAREKVLQEF 291
Query: 678 RASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 717
+ +LV +DV+ARG+D ++ V+ +P E YIH
Sbjct: 292 KQGLVQVLVATDVAARGLDIAELQYVINFELPFIAEDYIH 331
>SGD|S000001212 [details] [associations]
symbol:DBP8 "ATPase, putative RNA helicase" species:4932
"Saccharomyces cerevisiae" [GO:0030686 "90S preribosome"
evidence=IDA] [GO:0000472 "endonucleolytic cleavage to generate
mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0005730 "nucleolus" evidence=IEA;IDA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0000447
"endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S
rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S
rRNA, LSU-rRNA)" evidence=IMP] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IMP] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0000480 "endonucleolytic cleavage in 5'-ETS of
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0042254 "ribosome biogenesis" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 SGD:S000001212 GO:GO:0005524
GO:GO:0005730 EMBL:BK006934 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:U00027 GO:GO:0030686
GO:GO:0004004 GO:GO:0000447 GO:GO:0000472 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 KO:K14778 HOGENOM:HOG000268802
OrthoDB:EOG4PP1RW PIR:S48908 RefSeq:NP_012039.1
ProteinModelPortal:P38719 SMR:P38719 DIP:DIP-5628N IntAct:P38719
MINT:MINT-485349 STRING:P38719 PaxDb:P38719 PeptideAtlas:P38719
EnsemblFungi:YHR169W GeneID:856574 KEGG:sce:YHR169W CYGD:YHR169w
GeneTree:ENSGT00700000105515 OMA:FRNLCAI NextBio:982426
Genevestigator:P38719 GermOnline:YHR169W GO:GO:0000480
Uniprot:P38719
Length = 431
Score = 370 (135.3 bits), Expect = 3.3e-33, P = 3.3e-33
Identities = 115/351 (32%), Positives = 177/351 (50%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F G+S ++L A Q T +Q+A + LEG+D + AKTG+GK+IAF P
Sbjct: 4 FKSLGLSKWLTESLRAMKITQPTAIQKACIPKILEGRDCIGGAKTGSGKTIAFAGP---- 59
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+L S + + + ++L PTRELA QIA + AL + + I V +VGG
Sbjct: 60 MLTKWSEDPSGM----FGVVLTPTRELAMQIAEQFTALGSSMN-IRVSVIVGGESIVQQA 114
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVR-LMGLKMLVLDEADHLLDLGFRKDVENIV 559
L+ P ++ATPGRL HI + +V LM K LVLDEAD LL F + +
Sbjct: 115 LDLQRKP-HFIIATPGRLAHHIMSSGDDTVGGLMRAKYLVLDEADILLTSTFADHLATCI 173
Query: 560 DCLPRR--RQSLLFSATMPKEL-------VLKREHTYI--DTVGLGSVETPVKIKQSCLV 608
LP + RQ+LLF+AT+ ++ V K + + +V P +K ++
Sbjct: 174 SALPPKDKRQTLLFTATITDQVKSLQNAPVQKGKPPLFAYQVESVDNVAIPSTLKIEYIL 233
Query: 609 APHELHFQILHHLL--KEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKP 666
P + L+ LL +E+ T I+F + M +L L+++++ V ++S+ P
Sbjct: 234 VPEHVKEAYLYQLLTCEEYENKT----AIIFVNRTMTAEILRRTLKQLEVRVASLHSQMP 289
Query: 667 QLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 717
Q R FRA+ IL+ +DV++RG+D P V VV IP D + +IH
Sbjct: 290 QQERTNSLHRFRANAARILIATDVASRGLDIPTVELVVNYDIPSDPDVFIH 340
>ZFIN|ZDB-GENE-050208-665 [details] [associations]
symbol:ddx59 "DEAD (Asp-Glu-Ala-Asp) box
polypeptide 59" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-050208-665 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR007529
Pfam:PF04438 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 OMA:VTRPIID EMBL:BX649292
IPI:IPI00786758 Ensembl:ENSDART00000105600 Bgee:F1R8P9
Uniprot:F1R8P9
Length = 584
Score = 386 (140.9 bits), Expect = 3.6e-33, P = 3.6e-33
Identities = 111/377 (29%), Positives = 192/377 (50%)
Query: 345 EEQVELIRKEISXXXXXXXXXXXXXXXXXPILSQKRFDECGISPLTIKALTAAGYIQMTR 404
EEQ+E ++ E+ P++ F C + + L AAGY T
Sbjct: 146 EEQIERVKAELGIVSVGTEVCR-------PVIE---FQHCRFPTVLERNLKAAGYEAPTP 195
Query: 405 VQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLVPPIYVLILCPT 464
VQ + L G+D + A TG+GK++AFLLP + L++ S+S + P LIL PT
Sbjct: 196 VQMQMVPVGLTGRDVIATADTGSGKTVAFLLPVVMRALQSESASPS--CPAC--LILTPT 251
Query: 465 RELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIEN 524
RELA QI +A L++ + LVGG RL+ + +I++ TPGRLL+ ++
Sbjct: 252 RELAIQIEEQAKELMRGLPNMRTALLVGGMPLPPQLHRLKHN-IKIVIGTPGRLLEILKQ 310
Query: 525 KSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQSLLFSATMP---KELVL 581
K+ V+L ++ +V+DEAD +L +GF++ V +I++ +P Q+LL SAT+P ++L
Sbjct: 311 KA---VQLDHVRTVVVDEADTMLKMGFQQQVLDILEQVPEDHQTLLTSATIPTGTQQLAE 367
Query: 582 KREHTYIDTVGLGSVETP-VKIKQSCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCST 640
+ H + T+ +G P ++Q L + L +L + L P V V C
Sbjct: 368 RLTHDPV-TITIGQKNQPCANVRQIVLWVEEPSKKKKLFEILNDEKLYQPPVVVFVDCKL 426
Query: 641 GMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDV 700
G L + + M +N ++S K Q R++I + + +++++ + RG+D +V
Sbjct: 427 G-ADLLCEAVQKVMSLNTVAIHSDKMQWERNKIVKGLLEGQFDVVISTGILGRGLDLVNV 485
Query: 701 TSVVQVGIPPDREQYIH 717
V+ +P + ++Y+H
Sbjct: 486 KLVINFDMPSNMDEYVH 502
>ASPGD|ASPL0000072637 [details] [associations]
symbol:AN4903 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005730
"nucleolus" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005730 GO:GO:0003723 EMBL:BN001303 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AACD01000084 GO:GO:0006364
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K14778 RefSeq:XP_662507.1 ProteinModelPortal:Q5B3H7
EnsemblFungi:CADANIAT00005498 GeneID:2872706 KEGG:ani:AN4903.2
HOGENOM:HOG000268802 OMA:EVRTVEQ OrthoDB:EOG4PP1RW Uniprot:Q5B3H7
Length = 525
Score = 379 (138.5 bits), Expect = 3.8e-33, P = 3.8e-33
Identities = 117/357 (32%), Positives = 178/357 (49%)
Query: 378 QKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPA 437
+ F ++P + +LT + T +Q A + L+G+D + ++TG+GK+IAF +P
Sbjct: 94 ENSFKALNVAPWLVGSLTTMAVRKPTAIQRACIPEILKGRDCIGGSRTGSGKTIAFSVPI 153
Query: 438 IEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFK 497
++ + I+ +IL PTRELA QI E I + + + + GGT +
Sbjct: 154 LQKWAEDPFG--------IFAVILTPTRELALQIF-EQIKAISAPQSMKPVLITGGTDMR 204
Query: 498 VDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLK---MLVLDEADHLLDLG---F 551
L P ++VATPGRL DHI N SG + GLK M+VLDEAD LL G
Sbjct: 205 SQAIELAGRP-HVVVATPGRLADHI-NTSGTDT-VAGLKRVRMVVLDEADRLLSPGPGSM 261
Query: 552 RKDVENIVDCLP--RRRQSLLFSATMPKEL-VLK-------REHTYIDTVGLGSVET-PV 600
DVE + LP +RQ+LLF+AT+ E+ LK + ++ + + +T P
Sbjct: 262 LPDVETCLSFLPGPSQRQTLLFTATLTPEVRALKSMPQTPGKPPIFVTEISTEAKDTVPP 321
Query: 601 KIKQSCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVRE 660
++ + + P LH LL T IVF +T LL LLR + V
Sbjct: 322 TLRTTYVQVPLTHREAFLHVLLSTESNITKS--AIVFTNTTKSADLLERLLRSLGHRVTS 379
Query: 661 MYSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 717
++S PQ R+ FRAS +LV +DV++RG+D P V+ VV +P + + Y+H
Sbjct: 380 LHSLLPQSERNSNLARFRASAARVLVATDVASRGLDIPSVSLVVNFEVPRNPDDYVH 436
>UNIPROTKB|Q3SZ54 [details] [associations]
symbol:EIF4A1 "Eukaryotic initiation factor 4A-I"
species:9913 "Bos taurus" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003743 "translation initiation factor activity" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003743 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG107989 GeneTree:ENSGT00530000062880 EMBL:BC103130
IPI:IPI00698793 RefSeq:NP_001029400.1 UniGene:Bt.14169
ProteinModelPortal:Q3SZ54 SMR:Q3SZ54 STRING:Q3SZ54 PRIDE:Q3SZ54
Ensembl:ENSBTAT00000000144 GeneID:504958 KEGG:bta:504958 CTD:1973
InParanoid:Q3SZ54 KO:K03257 OMA:IKMFILD OrthoDB:EOG4640C1
NextBio:20866906 Uniprot:Q3SZ54
Length = 406
Score = 369 (135.0 bits), Expect = 4.2e-33, P = 4.2e-33
Identities = 106/344 (30%), Positives = 175/344 (50%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAF---LLPA 437
FD+ +S ++ + A G+ + + +Q+ + C++G D + +A++GTGK+ F +L
Sbjct: 34 FDDMNLSESLLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQAQSGTGKTATFAISILQQ 93
Query: 438 IEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFK 497
IE LKAT + L+L PTRELA QI +AL ++ G +GGT +
Sbjct: 94 IELDLKATQA-----------LVLAPTRELAQQIQKVVMAL-GDYMGASCHACIGGTNVR 141
Query: 498 VDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVEN 557
+ ++L+ + I+V TPGR+ D + N+ LS + +KM VLDEAD +L GF+ + +
Sbjct: 142 AEVQKLQMEAPHIIVGTPGRVFDML-NRRYLSPKY--IKMFVLDEADEMLSRGFKDQIYD 198
Query: 558 IVDCLPRRRQSLLFSATMPKELVLKREHTYIDTVGL--GSVETPVK-IKQSCL-VAPHEL 613
I L Q +L SATMP +++ + D + + E ++ I+Q + V E
Sbjct: 199 IFQKLNSNTQVVLLSATMPSDVLEVTKKFMRDPIRILVKKEELTLEGIRQFYINVEREEW 258
Query: 614 HFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRI 673
L L E + T + ++F +T L + V M+ Q RD I
Sbjct: 259 KLDTLCDLY-ETLTIT---QAVIFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDVI 314
Query: 674 SEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 717
EFR+ +L+T+D+ ARG+D V+ V+ +P +RE YIH
Sbjct: 315 MREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIH 358
>UNIPROTKB|F1P895 [details] [associations]
symbol:EIF4A1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00530000062880 OMA:PILEMED EMBL:AAEX03003619
EMBL:AAEX03003621 EMBL:AAEX03003620 Ensembl:ENSCAFT00000026357
Uniprot:F1P895
Length = 406
Score = 369 (135.0 bits), Expect = 4.2e-33, P = 4.2e-33
Identities = 106/344 (30%), Positives = 175/344 (50%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAF---LLPA 437
FD+ +S ++ + A G+ + + +Q+ + C++G D + +A++GTGK+ F +L
Sbjct: 34 FDDMNLSESLLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQAQSGTGKTATFAISILQQ 93
Query: 438 IEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFK 497
IE LKAT + L+L PTRELA QI +AL ++ G +GGT +
Sbjct: 94 IELDLKATQA-----------LVLAPTRELAQQIQKVVMAL-GDYMGASCHACIGGTNVR 141
Query: 498 VDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVEN 557
+ ++L+ + I+V TPGR+ D + N+ LS + +KM VLDEAD +L GF+ + +
Sbjct: 142 AEVQKLQMEAPHIIVGTPGRVFDML-NRRYLSPKY--IKMFVLDEADEMLSRGFKDQIYD 198
Query: 558 IVDCLPRRRQSLLFSATMPKELVLKREHTYIDTVGL--GSVETPVK-IKQSCL-VAPHEL 613
I L Q +L SATMP +++ + D + + E ++ I+Q + V E
Sbjct: 199 IFQKLNSNTQVVLLSATMPSDVLEVTKKFMRDPIRILVKKEELTLEGIRQFYINVEREEW 258
Query: 614 HFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRI 673
L L E + T + ++F +T L + V M+ Q RD I
Sbjct: 259 KLDTLCDLY-ETLTIT---QAVIFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDVI 314
Query: 674 SEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 717
EFR+ +L+T+D+ ARG+D V+ V+ +P +RE YIH
Sbjct: 315 MREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIH 358
>UNIPROTKB|J9NY67 [details] [associations]
symbol:EIF4A1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00530000062880 CTD:1973 KO:K03257 OMA:IKMFILD
EMBL:AAEX03006506 EMBL:AAEX03006505 RefSeq:NP_001238871.1
ProteinModelPortal:J9NY67 Ensembl:ENSCAFT00000014379
GeneID:100688577 KEGG:cfa:100688577 Uniprot:J9NY67
Length = 406
Score = 369 (135.0 bits), Expect = 4.2e-33, P = 4.2e-33
Identities = 106/344 (30%), Positives = 175/344 (50%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAF---LLPA 437
FD+ +S ++ + A G+ + + +Q+ + C++G D + +A++GTGK+ F +L
Sbjct: 34 FDDMNLSESLLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQAQSGTGKTATFAISILQQ 93
Query: 438 IEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFK 497
IE LKAT + L+L PTRELA QI +AL ++ G +GGT +
Sbjct: 94 IELDLKATQA-----------LVLAPTRELAQQIQKVVMAL-GDYMGASCHACIGGTNVR 141
Query: 498 VDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVEN 557
+ ++L+ + I+V TPGR+ D + N+ LS + +KM VLDEAD +L GF+ + +
Sbjct: 142 AEVQKLQMEAPHIIVGTPGRVFDML-NRRYLSPKY--IKMFVLDEADEMLSRGFKDQIYD 198
Query: 558 IVDCLPRRRQSLLFSATMPKELVLKREHTYIDTVGL--GSVETPVK-IKQSCL-VAPHEL 613
I L Q +L SATMP +++ + D + + E ++ I+Q + V E
Sbjct: 199 IFQKLNSNTQVVLLSATMPSDVLEVTKKFMRDPIRILVKKEELTLEGIRQFYINVEREEW 258
Query: 614 HFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRI 673
L L E + T + ++F +T L + V M+ Q RD I
Sbjct: 259 KLDTLCDLY-ETLTIT---QAVIFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDVI 314
Query: 674 SEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 717
EFR+ +L+T+D+ ARG+D V+ V+ +P +RE YIH
Sbjct: 315 MREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIH 358
>UNIPROTKB|P60842 [details] [associations]
symbol:EIF4A1 "Eukaryotic initiation factor 4A-I"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003743 "translation initiation factor
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0003729
"mRNA binding" evidence=TAS] [GO:0004386 "helicase activity"
evidence=TAS] [GO:0000339 "RNA cap binding" evidence=TAS]
[GO:0008135 "translation factor activity, nucleic acid binding"
evidence=TAS] [GO:0016281 "eukaryotic translation initiation factor
4F complex" evidence=TAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000288 "nuclear-transcribed mRNA catabolic
process, deadenylation-dependent decay" evidence=TAS] [GO:0000289
"nuclear-transcribed mRNA poly(A) tail shortening" evidence=TAS]
[GO:0005829 "cytosol" evidence=TAS] [GO:0006412 "translation"
evidence=TAS] [GO:0006413 "translational initiation" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016070 "RNA
metabolic process" evidence=TAS] [GO:0016071 "mRNA metabolic
process" evidence=TAS] [GO:0019221 "cytokine-mediated signaling
pathway" evidence=TAS] [GO:0044267 "cellular protein metabolic
process" evidence=TAS] Reactome:REACT_71 Reactome:REACT_21257
Reactome:REACT_17015 InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005829 GO:GO:0005524
Reactome:REACT_6900 EMBL:CH471108 GO:GO:0019048
Pathway_Interaction_DB:mtor_4pathway GO:GO:0006413 GO:GO:0016281
GO:GO:0031100 GO:GO:0003729 GO:GO:0019221 GO:GO:0008135
GO:GO:0004386 GO:GO:0003743 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0000289 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG107989 Reactome:REACT_1762 CTD:1973 KO:K03257
OMA:IKMFILD OrthoDB:EOG4640C1 EMBL:D13748 EMBL:BT019880
EMBL:BT019881 EMBL:AK312630 EMBL:AC016876 EMBL:BC006210
EMBL:BC009585 EMBL:BC073752 IPI:IPI00025491 PIR:S33681
RefSeq:NP_001191439.1 RefSeq:NP_001407.1 UniGene:Hs.129673 PDB:2G9N
PDB:2ZU6 PDB:3EIQ PDBsum:2G9N PDBsum:2ZU6 PDBsum:3EIQ
ProteinModelPortal:P60842 SMR:P60842 DIP:DIP-29755N IntAct:P60842
MINT:MINT-5001111 STRING:P60842 PhosphoSite:P60842 DMDM:46397463
PaxDb:P60842 PRIDE:P60842 DNASU:1973 Ensembl:ENST00000293831
Ensembl:ENST00000577269 GeneID:1973 KEGG:hsa:1973 UCSC:uc002gho.2
GeneCards:GC17P007476 HGNC:HGNC:3282 HPA:CAB011689 MIM:602641
neXtProt:NX_P60842 PharmGKB:PA27710 PhylomeDB:P60842 ChiTaRS:EIF4A1
EvolutionaryTrace:P60842 GenomeRNAi:1973 NextBio:7987
ArrayExpress:P60842 Bgee:P60842 CleanEx:HS_EIF4A1
Genevestigator:P60842 GermOnline:ENSG00000161960 GO:GO:0000339
Uniprot:P60842
Length = 406
Score = 369 (135.0 bits), Expect = 4.2e-33, P = 4.2e-33
Identities = 106/344 (30%), Positives = 175/344 (50%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAF---LLPA 437
FD+ +S ++ + A G+ + + +Q+ + C++G D + +A++GTGK+ F +L
Sbjct: 34 FDDMNLSESLLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQAQSGTGKTATFAISILQQ 93
Query: 438 IEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFK 497
IE LKAT + L+L PTRELA QI +AL ++ G +GGT +
Sbjct: 94 IELDLKATQA-----------LVLAPTRELAQQIQKVVMAL-GDYMGASCHACIGGTNVR 141
Query: 498 VDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVEN 557
+ ++L+ + I+V TPGR+ D + N+ LS + +KM VLDEAD +L GF+ + +
Sbjct: 142 AEVQKLQMEAPHIIVGTPGRVFDML-NRRYLSPKY--IKMFVLDEADEMLSRGFKDQIYD 198
Query: 558 IVDCLPRRRQSLLFSATMPKELVLKREHTYIDTVGL--GSVETPVK-IKQSCL-VAPHEL 613
I L Q +L SATMP +++ + D + + E ++ I+Q + V E
Sbjct: 199 IFQKLNSNTQVVLLSATMPSDVLEVTKKFMRDPIRILVKKEELTLEGIRQFYINVEREEW 258
Query: 614 HFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRI 673
L L E + T + ++F +T L + V M+ Q RD I
Sbjct: 259 KLDTLCDLY-ETLTIT---QAVIFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDVI 314
Query: 674 SEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 717
EFR+ +L+T+D+ ARG+D V+ V+ +P +RE YIH
Sbjct: 315 MREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIH 358
>UNIPROTKB|A6M928 [details] [associations]
symbol:EIF4A1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0003743
"translation initiation factor activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003743 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107989
GeneTree:ENSGT00530000062880 CTD:1973 KO:K03257 OMA:IKMFILD
OrthoDB:EOG4640C1 EMBL:CU914279 EMBL:DQ351283 RefSeq:NP_001093666.1
UniGene:Ssc.22034 ProteinModelPortal:A6M928 SMR:A6M928 PRIDE:A6M928
Ensembl:ENSSSCT00000019541 GeneID:100101929 KEGG:ssc:100101929
Uniprot:A6M928
Length = 406
Score = 369 (135.0 bits), Expect = 4.2e-33, P = 4.2e-33
Identities = 106/344 (30%), Positives = 175/344 (50%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAF---LLPA 437
FD+ +S ++ + A G+ + + +Q+ + C++G D + +A++GTGK+ F +L
Sbjct: 34 FDDMNLSESLLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQAQSGTGKTATFAISILQQ 93
Query: 438 IEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFK 497
IE LKAT + L+L PTRELA QI +AL ++ G +GGT +
Sbjct: 94 IELDLKATQA-----------LVLAPTRELAQQIQKVVMAL-GDYMGASCHACIGGTNVR 141
Query: 498 VDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVEN 557
+ ++L+ + I+V TPGR+ D + N+ LS + +KM VLDEAD +L GF+ + +
Sbjct: 142 AEVQKLQMEAPHIIVGTPGRVFDML-NRRYLSPKY--IKMFVLDEADEMLSRGFKDQIYD 198
Query: 558 IVDCLPRRRQSLLFSATMPKELVLKREHTYIDTVGL--GSVETPVK-IKQSCL-VAPHEL 613
I L Q +L SATMP +++ + D + + E ++ I+Q + V E
Sbjct: 199 IFQKLNSNTQVVLLSATMPSDVLEVTKKFMRDPIRILVKKEELTLEGIRQFYINVEREEW 258
Query: 614 HFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRI 673
L L E + T + ++F +T L + V M+ Q RD I
Sbjct: 259 KLDTLCDLY-ETLTIT---QAVIFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDVI 314
Query: 674 SEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 717
EFR+ +L+T+D+ ARG+D V+ V+ +P +RE YIH
Sbjct: 315 MREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIH 358
>UNIPROTKB|Q8EHT1 [details] [associations]
symbol:SO_1136 "ATP-dependent RNA helicase DEAD box family"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
RefSeq:NP_716761.1 ProteinModelPortal:Q8EHT1 GeneID:1168967
KEGG:son:SO_1136 PATRIC:23521912 OMA:IGAKENA ProtClustDB:CLSK869861
Uniprot:Q8EHT1
Length = 447
Score = 369 (135.0 bits), Expect = 4.2e-33, P = 4.2e-33
Identities = 114/348 (32%), Positives = 185/348 (53%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F E G++ KAL TRVQ+ + A L G+D + ++TG+GK+ AF LP ++
Sbjct: 19 FAELGLNAALRKALPTR-LKHPTRVQQLAIPAILAGRDLLALSQTGSGKTFAFGLPLLQI 77
Query: 441 VLKATSSSTT-QLVP---PIYVLILCPTRELASQI--AAEAIAL-LKNHDGIGVLTLVGG 493
+ + + TT + VP P+ L+L PTRELA Q+ A A+A L + + L GG
Sbjct: 78 LWQQIAVQTTAKSVPAAKPL-ALVLVPTRELALQVSEALHALASQLSTSAPLNIQLLCGG 136
Query: 494 TRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRK 553
+ L + P Q++VATPGRLLD + +S +S L +K LVLDEAD LL++GF
Sbjct: 137 VALEQQLADLSAKP-QLVVATPGRLLD-LCTQSHIS--LDAIKHLVLDEADRLLEMGFWP 192
Query: 554 DVENIVDCLPRRRQSLLFSATMPKEL-VLKREHTYIDTVGL-GSVETPV--KIKQSCLVA 609
D++ ++ +P+R+Q+LLFSAT+P+ L L + D + + S V +I++ +
Sbjct: 193 DMQKLMAMMPKRKQTLLFSATLPEALDSLAGKLLTNDPLKVEASTRNAVVGEIEEQLYLV 252
Query: 610 PHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLY 669
Q L LLK++ P +V+VF S + L + +N ++ K Q
Sbjct: 253 NKGSKAQALIALLKQY--QWP--QVLVFISARDDADAIAKRLVKAGINAAALHGEKDQTV 308
Query: 670 RDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 717
R + +F+A + +LV +D+ ARG+ + V+ + +P Y+H
Sbjct: 309 RSQTLADFKADRIQVLVATDLMARGIHVDALPVVINLDLPTSAPVYVH 356
>TIGR_CMR|SO_1136 [details] [associations]
symbol:SO_1136 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
RefSeq:NP_716761.1 ProteinModelPortal:Q8EHT1 GeneID:1168967
KEGG:son:SO_1136 PATRIC:23521912 OMA:IGAKENA ProtClustDB:CLSK869861
Uniprot:Q8EHT1
Length = 447
Score = 369 (135.0 bits), Expect = 4.2e-33, P = 4.2e-33
Identities = 114/348 (32%), Positives = 185/348 (53%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F E G++ KAL TRVQ+ + A L G+D + ++TG+GK+ AF LP ++
Sbjct: 19 FAELGLNAALRKALPTR-LKHPTRVQQLAIPAILAGRDLLALSQTGSGKTFAFGLPLLQI 77
Query: 441 VLKATSSSTT-QLVP---PIYVLILCPTRELASQI--AAEAIAL-LKNHDGIGVLTLVGG 493
+ + + TT + VP P+ L+L PTRELA Q+ A A+A L + + L GG
Sbjct: 78 LWQQIAVQTTAKSVPAAKPL-ALVLVPTRELALQVSEALHALASQLSTSAPLNIQLLCGG 136
Query: 494 TRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRK 553
+ L + P Q++VATPGRLLD + +S +S L +K LVLDEAD LL++GF
Sbjct: 137 VALEQQLADLSAKP-QLVVATPGRLLD-LCTQSHIS--LDAIKHLVLDEADRLLEMGFWP 192
Query: 554 DVENIVDCLPRRRQSLLFSATMPKEL-VLKREHTYIDTVGL-GSVETPV--KIKQSCLVA 609
D++ ++ +P+R+Q+LLFSAT+P+ L L + D + + S V +I++ +
Sbjct: 193 DMQKLMAMMPKRKQTLLFSATLPEALDSLAGKLLTNDPLKVEASTRNAVVGEIEEQLYLV 252
Query: 610 PHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLY 669
Q L LLK++ P +V+VF S + L + +N ++ K Q
Sbjct: 253 NKGSKAQALIALLKQY--QWP--QVLVFISARDDADAIAKRLVKAGINAAALHGEKDQTV 308
Query: 670 RDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 717
R + +F+A + +LV +D+ ARG+ + V+ + +P Y+H
Sbjct: 309 RSQTLADFKADRIQVLVATDLMARGIHVDALPVVINLDLPTSAPVYVH 356
>MGI|MGI:95303 [details] [associations]
symbol:Eif4a1 "eukaryotic translation initiation factor 4A1"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003743 "translation
initiation factor activity" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0006413 "translational
initiation" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 MGI:MGI:95303 GO:GO:0005524
GO:GO:0003743 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107989 CTD:1973
KO:K03257 OMA:IKMFILD OrthoDB:EOG4640C1 EMBL:X03039 EMBL:X03040
EMBL:L36611 EMBL:M22873 EMBL:L36608 EMBL:L36609 EMBL:L36610
EMBL:AB011595 EMBL:AK077429 EMBL:BC049915 IPI:IPI00118676
PIR:JS0039 RefSeq:NP_659207.1 UniGene:Mm.279821 UniGene:Mm.371557
UniGene:Mm.473799 ProteinModelPortal:P60843 SMR:P60843
MINT:MINT-202155 STRING:P60843 PhosphoSite:P60843
REPRODUCTION-2DPAGE:P60843 PaxDb:P60843 PRIDE:P60843
Ensembl:ENSMUST00000163666 GeneID:13681 KEGG:mmu:13681
InParanoid:P60843 NextBio:284438 Bgee:P60843 CleanEx:MM_EIF4A1
Genevestigator:P60843 GermOnline:ENSMUSG00000064241 Uniprot:P60843
Length = 406
Score = 369 (135.0 bits), Expect = 4.2e-33, P = 4.2e-33
Identities = 106/344 (30%), Positives = 175/344 (50%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAF---LLPA 437
FD+ +S ++ + A G+ + + +Q+ + C++G D + +A++GTGK+ F +L
Sbjct: 34 FDDMNLSESLLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQAQSGTGKTATFAISILQQ 93
Query: 438 IEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFK 497
IE LKAT + L+L PTRELA QI +AL ++ G +GGT +
Sbjct: 94 IELDLKATQA-----------LVLAPTRELAQQIQKVVMAL-GDYMGASCHACIGGTNVR 141
Query: 498 VDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVEN 557
+ ++L+ + I+V TPGR+ D + N+ LS + +KM VLDEAD +L GF+ + +
Sbjct: 142 AEVQKLQMEAPHIIVGTPGRVFDML-NRRYLSPKY--IKMFVLDEADEMLSRGFKDQIYD 198
Query: 558 IVDCLPRRRQSLLFSATMPKELVLKREHTYIDTVGL--GSVETPVK-IKQSCL-VAPHEL 613
I L Q +L SATMP +++ + D + + E ++ I+Q + V E
Sbjct: 199 IFQKLNSNTQVVLLSATMPSDVLEVTKKFMRDPIRILVKKEELTLEGIRQFYINVEREEW 258
Query: 614 HFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRI 673
L L E + T + ++F +T L + V M+ Q RD I
Sbjct: 259 KLDTLCDLY-ETLTIT---QAVIFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDVI 314
Query: 674 SEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 717
EFR+ +L+T+D+ ARG+D V+ V+ +P +RE YIH
Sbjct: 315 MREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIH 358
>UNIPROTKB|Q6P3V8 [details] [associations]
symbol:Eif4a1 "Protein Eif4a1" species:10116 "Rattus
norvegicus" [GO:0003743 "translation initiation factor activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 RGD:735141
GO:GO:0005524 GO:GO:0003743 EMBL:CH473948 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107989
GeneTree:ENSGT00530000062880 CTD:1973 KO:K03257 OMA:IKMFILD
OrthoDB:EOG4640C1 EMBL:BC063812 IPI:IPI00369618 RefSeq:NP_955404.1
UniGene:Rn.91523 SMR:Q6P3V8 STRING:Q6P3V8
Ensembl:ENSRNOT00000049048 GeneID:287436 KEGG:rno:287436
InParanoid:Q6P3V8 NextBio:626135 Genevestigator:Q6P3V8
Uniprot:Q6P3V8
Length = 406
Score = 369 (135.0 bits), Expect = 4.2e-33, P = 4.2e-33
Identities = 106/344 (30%), Positives = 175/344 (50%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAF---LLPA 437
FD+ +S ++ + A G+ + + +Q+ + C++G D + +A++GTGK+ F +L
Sbjct: 34 FDDMNLSESLLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQAQSGTGKTATFAISILQQ 93
Query: 438 IEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFK 497
IE LKAT + L+L PTRELA QI +AL ++ G +GGT +
Sbjct: 94 IELDLKATQA-----------LVLAPTRELAQQIQKVVMAL-GDYMGASCHACIGGTNVR 141
Query: 498 VDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVEN 557
+ ++L+ + I+V TPGR+ D + N+ LS + +KM VLDEAD +L GF+ + +
Sbjct: 142 AEVQKLQMEAPHIIVGTPGRVFDML-NRRYLSPKY--IKMFVLDEADEMLSRGFKDQIYD 198
Query: 558 IVDCLPRRRQSLLFSATMPKELVLKREHTYIDTVGL--GSVETPVK-IKQSCL-VAPHEL 613
I L Q +L SATMP +++ + D + + E ++ I+Q + V E
Sbjct: 199 IFQKLNSNTQVVLLSATMPSDVLEVTKKFMRDPIRILVKKEELTLEGIRQFYINVEREEW 258
Query: 614 HFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRI 673
L L E + T + ++F +T L + V M+ Q RD I
Sbjct: 259 KLDTLCDLY-ETLTIT---QAVIFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDVI 314
Query: 674 SEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 717
EFR+ +L+T+D+ ARG+D V+ V+ +P +RE YIH
Sbjct: 315 MREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIH 358
>UNIPROTKB|Q2NL08 [details] [associations]
symbol:DDX55 "ATP-dependent RNA helicase DDX55"
species:9913 "Bos taurus" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
InterPro:IPR025313 Pfam:PF13959 EMBL:BC111255 IPI:IPI00726158
RefSeq:NP_001039472.1 UniGene:Bt.74315 PRIDE:Q2NL08 GeneID:508581
KEGG:bta:508581 CTD:57696 HOGENOM:HOG000268803 HOVERGEN:HBG107796
InParanoid:Q2NL08 KO:K14809 OrthoDB:EOG4WH8KN NextBio:20868584
Uniprot:Q2NL08
Length = 601
Score = 386 (140.9 bits), Expect = 4.6e-33, P = 4.6e-33
Identities = 117/371 (31%), Positives = 177/371 (47%)
Query: 386 ISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKAT 445
+ P + L G+ MT VQ AT+ ++ KD +A TG+GK++AF++P E +L+
Sbjct: 16 LHPKVLSVLRELGFPYMTPVQSATIPLFMKNKDVAAEAVTGSGKTLAFVIPIEEILLRRE 75
Query: 446 SSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLES 505
V I I+ PTRELA QI K + +GG D R +
Sbjct: 76 EKFKKSQVGAI---IITPTRELAVQIEEVLSHFTKPFPQFSQILWIGGRNPGEDVARFKE 132
Query: 506 DPCQILVATPGRLLDHIENKS-GLSVR--LMGLKMLVLDEADHLLDLGFRKDVENIVDCL 562
I+VATPGRL D K+ GL + + L++LVLDEAD LLD+GF + I++ L
Sbjct: 133 LGGNIIVATPGRLEDMFRRKAEGLDLASCVRSLEVLVLDEADRLLDMGFETSINTILEFL 192
Query: 563 PRRRQSLLFSATMPKEL--VLK---REHTYIDT----VGLGSVE-TPVKIKQSCLVAPHE 612
P++R++ LFSAT +E+ +++ R I V S + TP +++ +V +
Sbjct: 193 PKQRRTGLFSATQTQEVENLVRAGLRNPVRISVKEKGVAASSTQKTPSRLENHYMVCKAD 252
Query: 613 LHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLY-RD 671
F L H L+ H K +VF ST L + V+ M Y R+
Sbjct: 253 EKFNQLVHFLRNH----KQEKHLVFFSTCACVEYYGKALETLVKGVKIMCIHGKMKYKRN 308
Query: 672 RISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXXXXXXX 731
+I EFR + ILV +DV ARG+D P+V V+Q P + ++H
Sbjct: 309 KIFMEFRKLQSGILVCTDVMARGIDIPEVNWVLQYDPPSNASAFVHRCGRTARIGHGGSA 368
Query: 732 VLLLAPWEEYF 742
++ L P EE +
Sbjct: 369 LVFLLPMEESY 379
>TAIR|locus:2825324 [details] [associations]
symbol:AT1G71370 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005524
GO:GO:0003723 EMBL:AC016163 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959
HOGENOM:HOG000268803 KO:K14809 EMBL:AK118294 IPI:IPI00527105
RefSeq:NP_177293.1 UniGene:At.70349 ProteinModelPortal:Q8GXD6
SMR:Q8GXD6 PRIDE:Q8GXD6 EnsemblPlants:AT1G71370.1 GeneID:843478
KEGG:ath:AT1G71370 GeneFarm:1028 TAIR:At1g71370 InParanoid:Q8GXD6
OMA:EYLKCEA PhylomeDB:Q8GXD6 ProtClustDB:CLSN2914591
Genevestigator:Q8GXD6 GermOnline:AT1G71370 Uniprot:Q8GXD6
Length = 558
Score = 383 (139.9 bits), Expect = 4.8e-33, P = 4.8e-33
Identities = 125/429 (29%), Positives = 197/429 (45%)
Query: 380 RFDECGISPLT---IKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLP 436
RF E PL+ I+AL +G+ T VQ T+ KD VV A TG+GK++AFLLP
Sbjct: 15 RFSELK-PPLSEDIIEALDRSGFEVCTPVQAETIPFLCSHKDVVVDAATGSGKTLAFLLP 73
Query: 437 AIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRF 496
IE + + S+S + +I+ PTREL++QI A + + + LVGG
Sbjct: 74 FIEIIRR--SNSYPPKPHQVMGVIISPTRELSAQIHKVAEPFVSTLPNVNSVLLVGGREV 131
Query: 497 KVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVE 556
+ D LE + +L+ TPGRL D ++ L R L++L+LDEAD LLD+GF+K V
Sbjct: 132 EADMNTLEEEGANLLIGTPGRLSDMMKRMEFLDFR--NLEILILDEADRLLDMGFQKQVN 189
Query: 557 NIVDCLPRRRQSLLFSATMPKELV-LKREHTYIDTVGLGSVETPVKIKQS--C--LVAPH 611
I+ LP++R++ LFSAT + + L + + E+ K C L
Sbjct: 190 YIISRLPKQRRTGLFSATQTQAVADLAKAGLRNAMEVISGAESKSKTSSGLYCEYLKCEA 249
Query: 612 ELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREM----KMNVREMYSRKPQ 667
+ L HLL E+ + K++VF T L+L ++ ++ + + Q
Sbjct: 250 DQKSSQLVHLLIEN----KNKKLVVFFMTCACVDYWGLVLSKIPTLKSISFFSTHGKMDQ 305
Query: 668 LYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXXX 727
RD F + +L+ +DV+ARG+D P + VVQ P D + +IH
Sbjct: 306 KGRDTALASFTEASSGVLLCTDVAARGLDIPGIDYVVQYDPPQDPDVFIHRVGRTARMER 365
Query: 728 XXXXVLLLAPWE-EYFXXXXXXXXXXXXXXXXXNPEIQLQMDNHMAKIDNNVKEAAYHAW 786
++ L P E +Y N + + +A D V E A+
Sbjct: 366 QGRAIVFLMPKETDYVEFMRIRRVPLQERKCSENASDVIPIIRSLAIKDRAVLEKGLQAF 425
Query: 787 LGYYNSIRE 795
+ + + +E
Sbjct: 426 VSFVRAYKE 434
>GENEDB_PFALCIPARUM|PFF1500c [details] [associations]
symbol:PFF1500c "DEAD/DEAH box ATP-dependent RNA
helicase, putative" species:5833 "Plasmodium falciparum"
[GO:0016070 "RNA metabolic process" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003723 GO:GO:0016070
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
EMBL:AL844505 InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313
Pfam:PF13959 HOGENOM:HOG000268799 KO:K13179 OMA:KDGYRSY
RefSeq:XP_966291.1 ProteinModelPortal:C6KTE4
EnsemblProtists:PFF1500c:mRNA GeneID:3885813 KEGG:pfa:PFF1500c
EuPathDB:PlasmoDB:PF3D7_0630900 ProtClustDB:CLSZ2514457
Uniprot:C6KTE4
Length = 601
Score = 385 (140.6 bits), Expect = 5.2e-33, Sum P(2) = 5.2e-33
Identities = 108/349 (30%), Positives = 186/349 (53%)
Query: 377 SQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLP 436
S+ +F+E I K L ++ +T +Q + L GKD + AKTG+GK++AFL+P
Sbjct: 146 SELKFEELNICDALKKGLKELNFVTLTEIQAKCIPHFLSGKDILGAAKTGSGKTLAFLVP 205
Query: 437 AIEAV--LKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGT 494
+I + +K + T VLI+ PTREL QI L K + ++GG
Sbjct: 206 SINILYNIKFLPKNGTG------VLIISPTRELCLQIYQVCKDLCKYIPQTNGI-IIGGM 258
Query: 495 RFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKD 554
++++ IL+ATPGRLLDH++N + L L++DEAD LL +GF ++
Sbjct: 259 SRNEEKKKFIHG-INILIATPGRLLDHMQNTKEFIYK--NLICLIIDEADRLLQIGFEEE 315
Query: 555 VENIVDCLPRRRQSLLFSATMPK--ELVLK---REHTYID-TVGLGSVETPVKIKQSCLV 608
+ I+ LP++RQ+ LFSAT E +++ ++ +I+ T + +VE +++Q +
Sbjct: 316 INLIIKRLPKKRQTALFSATQTTKVESLIRLSLQKPIFIEVTTKIATVE---RLQQGYAL 372
Query: 609 APHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQL 668
+ F +L LK+++ K++VF + M LL + + ++ +K Q
Sbjct: 373 VDEDKRFLLLFTFLKKNM----SKKIMVFFNNCMSVQFYNDLLNYIDIPTYCIHGKKKQN 428
Query: 669 YRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 717
R + +F A+K IL+ ++V+ARG+D P+V ++Q P D ++YIH
Sbjct: 429 KRLKSFHDFSAAKCAILLCTNVAARGLDIPNVNYIIQYDPPDDSKEYIH 477
Score = 42 (19.8 bits), Expect = 5.2e-33, Sum P(2) = 5.2e-33
Identities = 16/96 (16%), Positives = 40/96 (41%)
Query: 175 NYSVLSESKFSDRSKSASLIFMPNLECNDGETVIPSR--NVMDFVRRAYFSGTDKRNFCR 232
+Y+ + S ++ K+ + + + ++ ++ N+ + Y S ++ +
Sbjct: 7 DYNTMKNSNDNNLKKTKKNSIIKKKKKKKKKEILENKDSNIDNLKNENYRSESEAESEST 66
Query: 233 NDGSSTRDKAGFDTGNKAKPFARNLGNNRENGDSKN 268
ND S + + N+ + N NN + D+KN
Sbjct: 67 NDSVSLNN---IEEDNELNENSENNENNENDEDNKN 99
>UNIPROTKB|C6KTE4 [details] [associations]
symbol:PFF1500c "DEAD/DEAH box ATP-dependent RNA helicase,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003723 GO:GO:0016070 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 EMBL:AL844505 InterPro:IPR014014
PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959
HOGENOM:HOG000268799 KO:K13179 OMA:KDGYRSY RefSeq:XP_966291.1
ProteinModelPortal:C6KTE4 EnsemblProtists:PFF1500c:mRNA
GeneID:3885813 KEGG:pfa:PFF1500c EuPathDB:PlasmoDB:PF3D7_0630900
ProtClustDB:CLSZ2514457 Uniprot:C6KTE4
Length = 601
Score = 385 (140.6 bits), Expect = 5.2e-33, Sum P(2) = 5.2e-33
Identities = 108/349 (30%), Positives = 186/349 (53%)
Query: 377 SQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLP 436
S+ +F+E I K L ++ +T +Q + L GKD + AKTG+GK++AFL+P
Sbjct: 146 SELKFEELNICDALKKGLKELNFVTLTEIQAKCIPHFLSGKDILGAAKTGSGKTLAFLVP 205
Query: 437 AIEAV--LKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGT 494
+I + +K + T VLI+ PTREL QI L K + ++GG
Sbjct: 206 SINILYNIKFLPKNGTG------VLIISPTRELCLQIYQVCKDLCKYIPQTNGI-IIGGM 258
Query: 495 RFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKD 554
++++ IL+ATPGRLLDH++N + L L++DEAD LL +GF ++
Sbjct: 259 SRNEEKKKFIHG-INILIATPGRLLDHMQNTKEFIYK--NLICLIIDEADRLLQIGFEEE 315
Query: 555 VENIVDCLPRRRQSLLFSATMPK--ELVLK---REHTYID-TVGLGSVETPVKIKQSCLV 608
+ I+ LP++RQ+ LFSAT E +++ ++ +I+ T + +VE +++Q +
Sbjct: 316 INLIIKRLPKKRQTALFSATQTTKVESLIRLSLQKPIFIEVTTKIATVE---RLQQGYAL 372
Query: 609 APHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQL 668
+ F +L LK+++ K++VF + M LL + + ++ +K Q
Sbjct: 373 VDEDKRFLLLFTFLKKNM----SKKIMVFFNNCMSVQFYNDLLNYIDIPTYCIHGKKKQN 428
Query: 669 YRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 717
R + +F A+K IL+ ++V+ARG+D P+V ++Q P D ++YIH
Sbjct: 429 KRLKSFHDFSAAKCAILLCTNVAARGLDIPNVNYIIQYDPPDDSKEYIH 477
Score = 42 (19.8 bits), Expect = 5.2e-33, Sum P(2) = 5.2e-33
Identities = 16/96 (16%), Positives = 40/96 (41%)
Query: 175 NYSVLSESKFSDRSKSASLIFMPNLECNDGETVIPSR--NVMDFVRRAYFSGTDKRNFCR 232
+Y+ + S ++ K+ + + + ++ ++ N+ + Y S ++ +
Sbjct: 7 DYNTMKNSNDNNLKKTKKNSIIKKKKKKKKKEILENKDSNIDNLKNENYRSESEAESEST 66
Query: 233 NDGSSTRDKAGFDTGNKAKPFARNLGNNRENGDSKN 268
ND S + + N+ + N NN + D+KN
Sbjct: 67 NDSVSLNN---IEEDNELNENSENNENNENDEDNKN 99
>UNIPROTKB|P0A8J8 [details] [associations]
symbol:rhlB "RhlB" species:83333 "Escherichia coli K-12"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0006401 "RNA
catabolic process" evidence=IDA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA;IDA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] HAMAP:MF_00661 InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR023554
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0003723
GO:GO:0006401 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:M87049 GO:GO:0004004 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 EMBL:M83316 EMBL:X56310
PIR:G65181 RefSeq:NP_418227.1 RefSeq:YP_491659.1
ProteinModelPortal:P0A8J8 SMR:P0A8J8 DIP:DIP-35644N IntAct:P0A8J8
PaxDb:P0A8J8 PRIDE:P0A8J8 EnsemblBacteria:EBESCT00000001927
EnsemblBacteria:EBESCT00000015978 GeneID:12934326 GeneID:948290
KEGG:ecj:Y75_p3395 KEGG:eco:b3780 PATRIC:32123051 EchoBASE:EB0837
EcoGene:EG10844 HOGENOM:HOG000268807 KO:K03732 OMA:HIDGIKY
ProtClustDB:PRK04837 BioCyc:EcoCyc:EG10844-MONOMER
BioCyc:ECOL316407:JW3753-MONOMER Genevestigator:P0A8J8
Uniprot:P0A8J8
Length = 421
Score = 368 (134.6 bits), Expect = 5.4e-33, P = 5.4e-33
Identities = 114/373 (30%), Positives = 184/373 (49%)
Query: 376 LSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLL 435
L++++F + + P ++AL G+ T +Q L L G+D +A+TGTGK++AFL
Sbjct: 6 LTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLT 65
Query: 436 PAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTR 495
+L + + ++ P LI+ PTRELA QI A+A L + G+ + GG
Sbjct: 66 STFHYLLSHPAIADRKVNQP-RALIMAPTRELAVQIHADAEPLAEA-TGLKLGLAYGGDG 123
Query: 496 FKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDV 555
+ + LES IL+ T GRL+D+ + + L ++++VLDEAD + DLGF KD+
Sbjct: 124 YDKQLKVLESG-VDILIGTTGRLIDYAKQNH---INLGAIQVVVLDEADRMYDLGFIKDI 179
Query: 556 ENIVDCLP--RRRQSLLFSATMP---KELVLKREHT--YIDTVGLGSVETPVKIKQSCLV 608
+ +P +R ++LFSAT+ +EL ++ + YI+ +T +IK+
Sbjct: 180 RWLFRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEP--EQKTGHRIKEELFY 237
Query: 609 APHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQL 668
+E ++L L++E PD + I+F +T ++ L V + Q
Sbjct: 238 PSNEEKMRLLQTLIEEE---WPD-RAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQK 293
Query: 669 YRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXXXX 728
R RI +EF ILV +DV+ARG+ P VT V +P D E Y+H
Sbjct: 294 KRLRILDEFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGAS 353
Query: 729 XXXVLLLAPWEEY 741
+ L EEY
Sbjct: 354 GHSISLAC--EEY 364
>TAIR|locus:2091191 [details] [associations]
symbol:EIF4A-III "eukaryotic initiation factor 4A-III"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA;ISS] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0016020 "membrane" evidence=IDA] [GO:0001666 "response to
hypoxia" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005654 "nucleoplasm" evidence=IDA] [GO:0006397 "mRNA
processing" evidence=IPI] [GO:0016607 "nuclear speck" evidence=IDA]
[GO:0035145 "exon-exon junction complex" evidence=IDA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0005730 GO:GO:0016020
GO:GO:0016607 GO:GO:0001666 GO:GO:0006397 GO:GO:0003723
EMBL:AP000417 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 GO:GO:0035145 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195 KO:K13025
OMA:EDWKFDT EMBL:AJ010456 EMBL:AY050367 EMBL:BT002207
IPI:IPI00522986 PIR:T51737 RefSeq:NP_188610.1 UniGene:At.22577
ProteinModelPortal:Q94A52 SMR:Q94A52 STRING:Q94A52 PaxDb:Q94A52
PRIDE:Q94A52 EnsemblPlants:AT3G19760.1 GeneID:821513
KEGG:ath:AT3G19760 GeneFarm:908 TAIR:At3g19760 InParanoid:Q94A52
PhylomeDB:Q94A52 ProtClustDB:CLSN2915442 Genevestigator:Q94A52
GermOnline:AT3G19760 Uniprot:Q94A52
Length = 408
Score = 368 (134.6 bits), Expect = 5.4e-33, P = 5.4e-33
Identities = 109/348 (31%), Positives = 173/348 (49%)
Query: 374 PILSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAF 433
PI S F++ GI ++ + G+ + + +Q+ + L+G+D + +A++GTGK+
Sbjct: 33 PITS---FNDMGIKEDVLRGVYEYGFEKPSAIQQRAVMPILQGRDVIAQAQSGTGKTSMI 89
Query: 434 LLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGG 493
L + V TSS Q LIL PTRELA+Q + I + H I +GG
Sbjct: 90 ALSVCQVV--DTSSREVQ------ALILSPTRELATQ-TEKTIQAIGLHANIQAHACIGG 140
Query: 494 TRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRK 553
D R+LE ++ TPGR+ D I+ +S +R +K+L+LDE+D +L GF+
Sbjct: 141 NSVGEDIRKLEHG-VHVVSGTPGRVCDMIKRRS---LRTRAIKLLILDESDEMLSRGFKD 196
Query: 554 DVENIVDCLPRRRQSLLFSATMPKELVLKREHTYIDTVGL--GSVETPVK-IKQSCL-VA 609
+ ++ LP Q L SAT+P E++ + V + E ++ IKQ + V
Sbjct: 197 QIYDVYRYLPPDLQVCLVSATLPHEILEMTSKFMTEPVKILVKRDELTLEGIKQFFVAVE 256
Query: 610 PHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLY 669
E F L L + + T + ++FC+T L +R V M+ PQ
Sbjct: 257 KEEWKFDTLCDLY-DTLTIT---QAVIFCNTKRKVDYLSEKMRSHNFTVSSMHGDMPQKE 312
Query: 670 RDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 717
RD I EFR+ +L+T+DV ARG+D V+ V+ +P +RE YIH
Sbjct: 313 RDAIMNEFRSGDSRVLITTDVWARGIDVQQVSLVINYDLPNNRELYIH 360
>TAIR|locus:2153564 [details] [associations]
symbol:AT5G05450 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:AB010692 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959
HOGENOM:HOG000268803 KO:K14809 EMBL:AJ010469 IPI:IPI00516547
PIR:T51344 RefSeq:NP_196164.1 UniGene:At.23004
ProteinModelPortal:Q9FLB0 SMR:Q9FLB0 PaxDb:Q9FLB0 PRIDE:Q9FLB0
EnsemblPlants:AT5G05450.1 GeneID:830428 KEGG:ath:AT5G05450
GeneFarm:935 TAIR:At5g05450 InParanoid:Q9FLB0 OMA:MDSSANI
PhylomeDB:Q9FLB0 ProtClustDB:CLSN2679231 Genevestigator:Q9FLB0
GermOnline:AT5G05450 Uniprot:Q9FLB0
Length = 593
Score = 385 (140.6 bits), Expect = 5.5e-33, P = 5.5e-33
Identities = 117/387 (30%), Positives = 193/387 (49%)
Query: 376 LSQKRFDECGISPLT---IKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIA 432
L++ RF + PL+ I+AL + + T VQ AT+ KD V A TG+GK++A
Sbjct: 11 LTETRFSDLE-PPLSGDIIEALNQSDFEFCTPVQAATIPLLCSYKDVAVDAATGSGKTLA 69
Query: 433 FLLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVG 492
F++P +E + ++TS + +I+ PTREL++QI A + + + LVG
Sbjct: 70 FVVPLVEILRRSTSFPPKP--HQVMGVIISPTRELSTQIYNVAQPFVSTLANVNSVLLVG 127
Query: 493 GTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFR 552
G K D + +E + C +L+ TPGRL D +E L R L++L+LDEAD LL++GF+
Sbjct: 128 GREVKADMKIIEEEGCNVLIGTPGRLSDIMERMEILDFR--NLEILILDEADRLLEMGFQ 185
Query: 553 KDVENIVDCLPRRRQSLLFSATMPK--ELVLK---REHTYIDTVGLGSVETPVKIKQSCL 607
+ V I+ LP++R++ LFSAT + E + K R ++ E+ ++ S
Sbjct: 186 RQVNYIISRLPKQRRTGLFSATQTEGVEELAKAGLRNPVRVEVRAKSKSESSQQLTNS-- 243
Query: 608 VAPHELHFQILH-------HLLKEHILGTPDYKVIVF---CSTGMVTSLLYLLLREMK-M 656
P LH + + L + ++ D K+IVF C++ L+ + +K +
Sbjct: 244 KTPSGLHLEYMECEADKKSSQLVDLLIKNSDKKLIVFFMTCASVDYWGLVLSKIPALKSI 303
Query: 657 NVREMYSRKPQLYRDRISEEF-RASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQY 715
++ ++ Q RD+ F +AS +L T DV+ARG+D P + VVQ P D +
Sbjct: 304 SLIPIHGDMKQNARDKALASFTKASSGALLCT-DVAARGLDIPGIDYVVQYDPPQDPNMF 362
Query: 716 IHXXXXXXXXXXXXXXVLLLAPWEEYF 742
H ++ L P EE +
Sbjct: 363 NHRAGRTARLGRQGRAIVFLLPKEEAY 389
>WB|WBGene00022378 [details] [associations]
symbol:Y94H6A.5 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0016818 "hydrolase activity, acting on
acid anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0040010
"positive regulation of growth rate" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012541 Pfam:PF00270 Pfam:PF00271 Pfam:PF08147
ProDom:PD024971 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0040010 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 KO:K14808 HOGENOM:HOG000246455
OMA:FYIPYRP GeneTree:ENSGT00550000075100 EMBL:FO081810
GeneID:177054 KEGG:cel:CELE_Y94H6A.5 UCSC:Y94H6A.5a CTD:177054
NextBio:895136 RefSeq:NP_741347.2 ProteinModelPortal:Q688Z4
SMR:Q688Z4 STRING:Q688Z4 PRIDE:Q688Z4 EnsemblMetazoa:Y94H6A.5b
WormBase:Y94H6A.5b InParanoid:Q688Z4 ArrayExpress:Q688Z4
Uniprot:Q688Z4
Length = 871
Score = 391 (142.7 bits), Expect = 5.8e-33, P = 5.8e-33
Identities = 119/445 (26%), Positives = 209/445 (46%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
+ + G+ KA+ G+ Q T +Q T+ ++GKD V ++TG+GK+ AF++P ++
Sbjct: 26 WQQIGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGKDVVAMSRTGSGKTAAFVIPMLQ- 84
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
K TT I L++ PTRELA Q + + L G+ LVGG + +
Sbjct: 85 --KLKRRDTTG----IRALMVSPTRELALQ-TFKVVKELGRFTGLRCACLVGGDQIEEQF 137
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
+ +P IL+ATPGRLL H+ + + +RL ++ +V DEAD L ++GF+ + +
Sbjct: 138 STIHENP-DILLATPGRLL-HVIVE--MDLRLSYVQYVVFDEADRLFEMGFQDQLTETLK 193
Query: 561 CLPRRRQSLLFSATMPKELVLKREHTYIDTVGLG-SVETPVKIKQS---CLVAPHELHFQ 616
+P RQ+LLFSAT+PK LV + D + + V+ V K S C+ P E F
Sbjct: 194 RIPESRQTLLFSATLPKMLVDFAKAGLTDPMLVRLDVDEKVSDKLSMVFCMCRPDEKLFA 253
Query: 617 ILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEE 676
+LH L + + + + +VFC+T + +L ++ +YS+ R ++
Sbjct: 254 LLH-LCRR--MDRENKQTVVFCATMKHVEYVVGILHRAGIDCSFVYSQLDATARKMNIQK 310
Query: 677 FRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXXXXXXXVLLLA 736
F + ILV +DV+ARG+D P + +V+ + PP + ++H + L+A
Sbjct: 311 FHEKQNNILVVTDVAARGVDIPLLDTVINLHFPPKAKLFVHRVGRVARAGRSGTAISLIA 370
Query: 737 PWEEYFXXXXXXXXXXXXXXXXXNPEIQLQMDNHMAKIDNNVKEAAYHAWLGYYNSIREI 796
E + E + + + + ++ +++ +++SI +
Sbjct: 371 NDELPYLTDLFMFLGKPINFASDKSEYK-EDETLIGRVPDSIVSLETE----FFHSIHDN 425
Query: 797 GRDKTTLVELANKFAQSIGLQRPPP 821
D L + A RPPP
Sbjct: 426 NEDMQDLRQKATNAMMKYTRTRPPP 450
>MGI|MGI:1915098 [details] [associations]
symbol:Ddx55 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 55"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 MGI:MGI:1915098 GO:GO:0005524
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
InterPro:IPR025313 Pfam:PF13959 HSSP:P26196 CTD:57696
HOGENOM:HOG000268803 HOVERGEN:HBG107796 KO:K14809 OrthoDB:EOG4WH8KN
GeneTree:ENSGT00550000074969 OMA:CACVEYW EMBL:AK129402
EMBL:AK033741 EMBL:AK154422 EMBL:BC117786 EMBL:BC117787
IPI:IPI00453808 RefSeq:NP_080685.2 UniGene:Mm.281601
ProteinModelPortal:Q6ZPL9 SMR:Q6ZPL9 IntAct:Q6ZPL9 STRING:Q6ZPL9
PRIDE:Q6ZPL9 Ensembl:ENSMUST00000071057 GeneID:67848 KEGG:mmu:67848
UCSC:uc008zqc.2 InParanoid:Q6ZPL9 NextBio:325707 Bgee:Q6ZPL9
CleanEx:MM_DDX55 Genevestigator:Q6ZPL9
GermOnline:ENSMUSG00000029389 Uniprot:Q6ZPL9
Length = 600
Score = 385 (140.6 bits), Expect = 6.0e-33, P = 6.0e-33
Identities = 114/371 (30%), Positives = 178/371 (47%)
Query: 386 ISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKAT 445
+ P + AL G+ MT VQ AT+ ++ KD +A TG+GK++AF++P +E +L+
Sbjct: 16 LHPRVLGALRELGFPHMTPVQSATIPLFMKNKDVAAEAVTGSGKTLAFVIPILEILLRRE 75
Query: 446 SSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLES 505
V I ++ PTRELA QI K+ + +GG D R +
Sbjct: 76 EKLKKNQVGAI---VITPTRELAIQIDEVLSHFTKHFPQFSQILWIGGRNPGEDVERFKQ 132
Query: 506 DPCQILVATPGRLLDHIENKS-GLSVR--LMGLKMLVLDEADHLLDLGFRKDVENIVDCL 562
I+VATPGRL D K+ GL + + L +LVLDEAD LLD+GF + I++ L
Sbjct: 133 HGGNIIVATPGRLEDMFRRKAEGLDLASCVKSLDVLVLDEADRLLDMGFEASINTILEFL 192
Query: 563 PRRRQSLLFSATMPKEL--VLK---REHTYIDT----VGLGSVE-TPVKIKQSCLVAPHE 612
P++R++ LFSAT +E+ +++ R I V S + TP +++ ++ +
Sbjct: 193 PKQRRTGLFSATQTQEVENLVRAGLRNPVRISVKEKGVAASSTQKTPSRLENHYMICKAD 252
Query: 613 LHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLY-RD 671
F L H L+ K +VF ST L + V+ + Y R+
Sbjct: 253 EKFNQLVHFLRSR----QQEKHLVFFSTCACVEYYGKALEALLKKVKILCIHGKMKYKRN 308
Query: 672 RISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXXXXXXX 731
+I EFR + ILV +DV ARG+D P+V V+Q P + ++H
Sbjct: 309 KIFMEFRKLQSGILVCTDVMARGIDIPEVNWVLQYDPPSNASAFVHRCGRTARIGHGGSA 368
Query: 732 VLLLAPWEEYF 742
++ L P EE +
Sbjct: 369 LVFLLPMEEAY 379
>DICTYBASE|DDB_G0281925 [details] [associations]
symbol:DDB_G0281925 "DEAD/DEAH box helicase"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 dictyBase:DDB_G0281925 GO:GO:0005524 GO:GO:0003676
EMBL:AAFI02000043 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 RefSeq:XP_640502.1
ProteinModelPortal:Q54T87 PRIDE:Q54T87 EnsemblProtists:DDB0304645
GeneID:8623317 KEGG:ddi:DDB_G0281925 InParanoid:Q54T87 OMA:SWGNRDN
Uniprot:Q54T87
Length = 586
Score = 384 (140.2 bits), Expect = 6.4e-33, P = 6.4e-33
Identities = 128/418 (30%), Positives = 196/418 (46%)
Query: 312 DVKKMGSSASLGKYDMKITKRVPLKSLEDEHDFEEQVELIRKE---ISXXXXXXXXXXXX 368
D + S S+ K K+ KS + D EE+V+ KE +S
Sbjct: 43 DSEVESKSKSIKKSSKSEEKKSEKKSSSSKEDKEEEVKEETKEDIVLSPTEWRKKHNVLI 102
Query: 369 XXXXXPILSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTG 428
P QK F + P + + G+ T +Q + L G D V A TG+G
Sbjct: 103 EGKSQPNPFQK-FTDYEF-PRMFQHIFQ-GFTAPTVIQGQSWPIILGGNDLVGLAATGSG 159
Query: 429 KSIAFLLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVL 488
K++AFLLPA+ ++ + P VL++ PTRELA QI ++ I L
Sbjct: 160 KTLAFLLPALLKIISLPKRPSYGATP--LVLVMAPTRELAQQIEEVCKTSIRG-TSIRQL 216
Query: 489 TLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLD 548
GG K+DQ R+ + I++ TPGRL D + K LS ++ LVLDEAD +LD
Sbjct: 217 CAYGGLG-KIDQSRILRNGVDIVIGTPGRLNDLLR-KHHLS----SVQYLVLDEADRMLD 270
Query: 549 LGFRKDVENIVDCLPRRRQSLLFSATMPKELVLKREHTYID----TVGLGSVETPVKIKQ 604
+GF +E+++D +P+ RQ+L+FSAT PKE+ L D TVG + + + Q
Sbjct: 271 MGFMPQIESLIDQIPKERQTLMFSATWPKEVKLLASKFLKDPIKITVGSQELTGSINVTQ 330
Query: 605 SCLVAPHELHFQ---ILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVRE- 660
+ Q +++ + + + P VIVFC+ L K NV+
Sbjct: 331 HIVNIDDLSDLQSDDLIYDEINKILTADPTNTVIVFCNEKYKCDDFQHYLSTQK-NVKSI 389
Query: 661 -MYSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 717
++S K Q R+ + FR + IL+ +DV+ARG+D P V +V +P + E Y+H
Sbjct: 390 VLHSGKDQRMRESGLKLFRDHRIRILIATDVAARGLDIPSVKAVFNYRLPGNIEDYVH 447
>ZFIN|ZDB-GENE-031113-10 [details] [associations]
symbol:ddx21 "DEAD (Asp-Glu-Ala-Asp) box polypeptide
21" species:7955 "Danio rerio" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012562 InterPro:IPR017956 Pfam:PF00270 Pfam:PF00271
Pfam:PF08152 PROSITE:PS51194 SMART:SM00384 SMART:SM00490
ZFIN:ZDB-GENE-031113-10 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 CTD:9188 HOVERGEN:HBG051331
OrthoDB:EOG46143T EMBL:BC160629 IPI:IPI00611974
RefSeq:NP_001120807.1 UniGene:Dr.104447 ProteinModelPortal:B1H1J4
STRING:B1H1J4 GeneID:799650 KEGG:dre:799650 NextBio:20933916
Uniprot:B1H1J4
Length = 759
Score = 389 (142.0 bits), Expect = 6.5e-33, P = 6.5e-33
Identities = 108/348 (31%), Positives = 179/348 (51%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F ISP TIK L A G + +Q T +A +GKD + +A+TGTGK+ +F +P +E
Sbjct: 168 FSNFRISPNTIKLLQARGVSYLFDIQVKTFNAVYDGKDLIGQARTGTGKTFSFAVPLVEK 227
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
L++ + PP VL+L PTRELA Q+ + + + + V GG+ +
Sbjct: 228 -LQSGDQERRRGRPP-KVLVLAPTRELAIQVTKDFKDITRK---LSVTCFYGGSSYNPQI 282
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
+ S +LV TPGR+ DH++N + L L+ +VLDE D +LD+GF + VE I+
Sbjct: 283 DAIRSG-IDVLVGTPGRIRDHLQNNK---LDLSQLQHVVLDEVDQMLDMGFAEQVEEILS 338
Query: 561 C-----LPRRRQSLLFSATMPKEL--VLKR----EHTYIDTVGLGSVETPVKIKQSCLVA 609
++ Q+LLFSAT P + V K+ + ++D +G + + ++ +
Sbjct: 339 ASYKKDAEQKPQTLLFSATCPSWVYDVAKKYMRSQFIHVDLIGKKTQKAATTVEHLAIAC 398
Query: 610 PHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLY 669
++ +++ + G+ + IVFC T + L L +K + + ++ PQ
Sbjct: 399 HWSQRASVIGDVIQVYS-GSHG-RTIVFCETKKEATELSLNT-SIKQSAQSLHGDIPQKQ 455
Query: 670 RDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 717
R+ + FR +LV ++V+ARG+D P+V V+Q P D E YIH
Sbjct: 456 REVTLKGFRNGSFEVLVATNVAARGLDIPEVDLVIQSSPPNDVESYIH 503
>TIGR_CMR|VC_2564 [details] [associations]
symbol:VC_2564 "ATP-dependent RNA helicase DbpA"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083
KO:K05591 ProtClustDB:PRK11776 InterPro:IPR005580 Pfam:PF03880
OMA:THEKSTI PIR:B82060 RefSeq:NP_232192.1 ProteinModelPortal:Q9KP15
DNASU:2615581 GeneID:2615581 KEGG:vch:VC2564 PATRIC:20084152
Uniprot:Q9KP15
Length = 460
Score = 367 (134.2 bits), Expect = 6.9e-33, P = 6.9e-33
Identities = 113/346 (32%), Positives = 170/346 (49%)
Query: 376 LSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLL 435
++ F + P + L G+ MT +Q +L A L+G+D + + KTG+GK+ AF L
Sbjct: 1 MNANSFAALNLKPELLANLETMGFATMTPIQAQSLPAILKGQDVIGQGKTGSGKTAAFGL 60
Query: 436 PAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTR 495
VL + + + L+LCPTRELA Q+A + L + I VLTL GG
Sbjct: 61 ----GVLSNLNVKRFR----VQALVLCPTRELADQVATDIRTLGRAIHNIKVLTLCGGMP 112
Query: 496 FKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDV 555
LE ILV TPGR+LDH+ + L L LVLDEAD +L++GF++ +
Sbjct: 113 MGPQIGSLEHG-AHILVGTPGRILDHLSKDR---IDLSELNTLVLDEADRMLEMGFQEAL 168
Query: 556 ENIVDCLPRRRQSLLFSATMPK--ELVLKREHTYIDTVGLGSVETPVKIKQSCL-VAPHE 612
E I+ P RQ+LLFSAT P E + + + + + I+Q V
Sbjct: 169 EAIIAAAPAERQTLLFSATYPASIEQIAQSVTRNALMIKVEATHDTSSIRQYFYKVEGSA 228
Query: 613 LHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDR 672
+ L LL H P V VFC+T + L + +V E++ Q RD+
Sbjct: 229 ARDEALETLLLHH---QPTSSV-VFCNTKREVQNVADALHQSGFSVIELHGDMEQRERDQ 284
Query: 673 ISEEFRASKRL-ILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 717
+F A+K + ILV +DV+ARG+D ++ +V + D E ++H
Sbjct: 285 ALVQF-ANKSISILVATDVAARGLDVDNLDAVFNYDLSRDPEVHVH 329
>UNIPROTKB|A4FV23 [details] [associations]
symbol:DDX21 "DDX21 protein" species:9913 "Bos taurus"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012562
Pfam:PF00270 Pfam:PF00271 Pfam:PF08152 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00680000100003 CTD:9188 HOGENOM:HOG000268805
HOVERGEN:HBG051331 OMA:EILCVAY OrthoDB:EOG46143T EMBL:DAAA02061828
EMBL:BC123648 IPI:IPI00694353 RefSeq:NP_001076996.1
UniGene:Bt.92068 Ensembl:ENSBTAT00000019351 GeneID:781917
KEGG:bta:781917 InParanoid:A4FV23 NextBio:20925123 Uniprot:A4FV23
Length = 784
Score = 389 (142.0 bits), Expect = 7.2e-33, P = 7.2e-33
Identities = 116/373 (31%), Positives = 183/373 (49%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F IS TIK L A G + +Q T GKD + +A+TGTGK+ +F +P +E
Sbjct: 189 FSNFPISEETIKLLKARGVTFLFPIQAKTFHHVYSGKDLIAQARTGTGKTFSFAIPLVEK 248
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+L P VL+L PTRELASQ++ + + K + V GGT +
Sbjct: 249 LLGELQDRKRGRAPQ--VLVLAPTRELASQVSRDFSDITKK---LAVACFYGGTPYGGQI 303
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
R+++ ILV TPGR+ DH++N G + L LK +VLDE D +LD+GF VE I+
Sbjct: 304 ERMKNG-IDILVGTPGRIKDHLQN--G-KLDLTKLKHVVLDEVDQMLDMGFADQVEEIL- 358
Query: 561 CLPRRR------QSLLFSATMPKEL--VLKR--EHTY--IDTVGLGSVETPVKIKQSCLV 608
C+ ++ Q+LLFSAT P + V K+ + TY +D +G + +T + ++ +
Sbjct: 359 CVAYKKDSEDNPQTLLFSATCPYWVFNVAKKYMKSTYEQVDLIGKKTQKTAITVEHLAIK 418
Query: 609 APHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQL 668
++ +++ + G + I+FC T L + ++ + + ++ PQ
Sbjct: 419 CHWTQRAAVIGDVIRVYS-GFQG-RTIIFCETKKEAQELSQNVA-VRQDAQSLHGDIPQK 475
Query: 669 YRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXXXXXXXXXX 728
R+ + FR +LV ++V+ARG+D P+V VVQ P D E YIH
Sbjct: 476 QREITLKGFRNGDFGVLVATNVAARGLDIPEVDLVVQSSPPKDVESYIHRSGRTGRAGRT 535
Query: 729 XXXVLLLAPWEEY 741
+ EEY
Sbjct: 536 GVCICFYQHKEEY 548
>ASPGD|ASPL0000037981 [details] [associations]
symbol:AN2932 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005829 "cytosol"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 EMBL:BN001306 EMBL:AACD01000051 GO:GO:0003743
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 KO:K03257 OMA:TENDARQ RefSeq:XP_660536.1
PRIDE:Q5B948 GeneID:2874390 KEGG:ani:AN2932.2 OrthoDB:EOG4PG98F
Uniprot:Q5B948
Length = 398
Score = 366 (133.9 bits), Expect = 8.9e-33, P = 8.9e-33
Identities = 106/341 (31%), Positives = 170/341 (49%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
FD + P ++ + A G+ + + +Q+ + ++G D + +A++GTGK+ F +I A
Sbjct: 27 FDSMELKPELLRGVYAYGFERPSAIQQRAILPIVKGNDVIAQAQSGTGKTATF---SISA 83
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+ K + V LI+ PTRELA QI IA+ + I +GGT + D
Sbjct: 84 LQKLDPN-----VKACQALIVAPTRELAQQIQKVVIAI-GDFMNIQCHACIGGTAVRDDM 137
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
L P QI+V TPGR+ D I+ + ++ +KM +LDEAD +L GF + + +I
Sbjct: 138 NALREGP-QIVVGTPGRIHDMIQRRV---LKTDQMKMFILDEADEMLSRGFTEQIYDIFQ 193
Query: 561 CLPRRRQSLLFSATMPKELVLKREHTYIDTVGL--GSVETPVK-IKQSCL-VAPHELHFQ 616
LP+ Q +L SATMP++++ D V + E ++ IKQ + V E
Sbjct: 194 LLPQSTQVVLLSATMPQDVLEVTTKFMRDPVRILVKKQELTLEGIKQFYIAVEKEEWKLD 253
Query: 617 ILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEE 676
L L E + T + ++FC+T L L V M+ Q RD I +E
Sbjct: 254 TLSDLY-ETVTIT---QAVIFCNTRRKVDWLTDKLTARDFTVSAMHGDMEQAQRDVIMKE 309
Query: 677 FRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 717
FR+ +L+ +D+ ARG+D V+ V+ +P +RE YIH
Sbjct: 310 FRSGSSRVLIATDLLARGIDVQQVSLVINYDLPANRENYIH 350
>TAIR|locus:2162022 [details] [associations]
symbol:AT5G63120 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0000184 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
EMBL:AB008265 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823 EMBL:AY060589
EMBL:BT000610 EMBL:AK226611 EMBL:AJ010476 IPI:IPI00532778
IPI:IPI00537266 PIR:T51349 RefSeq:NP_568964.1 RefSeq:NP_974985.1
UniGene:At.27361 ProteinModelPortal:Q8W4R3 SMR:Q8W4R3 PaxDb:Q8W4R3
PRIDE:Q8W4R3 EnsemblPlants:AT5G63120.2 GeneID:836432
KEGG:ath:AT5G63120 GeneFarm:979 TAIR:At5g63120 InParanoid:Q8W4R3
OMA:FTHANAK PhylomeDB:Q8W4R3 ProtClustDB:CLSN2690069
Genevestigator:Q8W4R3 GermOnline:AT5G63120 Uniprot:Q8W4R3
Length = 591
Score = 383 (139.9 bits), Expect = 9.0e-33, P = 9.0e-33
Identities = 114/344 (33%), Positives = 175/344 (50%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
K F + ++A+ G+ + T +Q L+G+D + A+TG+GK++A+LLPA+
Sbjct: 165 KMFQDANFPDNILEAIAKLGFTEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAL 224
Query: 439 EAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIAL-LKNHDGIGVLTLVGGTRFK 497
V + Q PI VLIL PTRELA QI E+ L++ G+ + GG K
Sbjct: 225 VHV--SAQPRLGQDDGPI-VLILAPTRELAVQIQEESRKFGLRS--GVRSTCIYGGAP-K 278
Query: 498 VDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVEN 557
Q R +I++ATPGRL+D +E + L + LVLDEAD +LD+GF +
Sbjct: 279 GPQIRDLRRGVEIVIATPGRLIDMLECQH---TNLKRVTYLVLDEADRMLDMGFEPQIRK 335
Query: 558 IVDCLPRRRQSLLFSATMPKEL-VLKREHT---YIDTVGLGSVETPVKIKQSCLVAPHEL 613
IV + RQ+LL+SAT P+E+ L R+ Y +G ++ I Q + P
Sbjct: 336 IVSQIRPDRQTLLWSATWPREVETLARQFLRDPYKAIIGSTDLKANQSINQVIEIVPTPE 395
Query: 614 HFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRI 673
+ L LLK+ + G+ K+++F T + LR ++ K Q RDR+
Sbjct: 396 KYNRLLTLLKQLMDGS---KILIFVETKRGCDQVTRQLRMDGWPALAIHGDKTQSERDRV 452
Query: 674 SEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 717
EF++ + I+ +DV+ARG+D D+ VV P E YIH
Sbjct: 453 LAEFKSGRSPIMTATDVAARGLDVKDIKCVVNYDFPNTLEDYIH 496
>UNIPROTKB|Q7L014 [details] [associations]
symbol:DDX46 "Probable ATP-dependent RNA helicase DDX46"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0015030 "Cajal body" evidence=IEA] [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0008380 GO:GO:0016607 GO:GO:0006397 GO:GO:0003723
GO:GO:0015030 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K12811 EMBL:AF106680 EMBL:AB018344 EMBL:BC012304 EMBL:BK000565
IPI:IPI00329791 RefSeq:NP_055644.2 UniGene:Hs.406549
ProteinModelPortal:Q7L014 SMR:Q7L014 IntAct:Q7L014
MINT:MINT-3002486 STRING:Q7L014 PhosphoSite:Q7L014 DMDM:116241326
PaxDb:Q7L014 PeptideAtlas:Q7L014 PRIDE:Q7L014
Ensembl:ENST00000354283 Ensembl:ENST00000452510 GeneID:9879
KEGG:hsa:9879 UCSC:uc003kzw.3 CTD:9879 GeneCards:GC05P134094
HGNC:HGNC:18681 HPA:HPA036554 neXtProt:NX_Q7L014
PharmGKB:PA134894452 HOGENOM:HOG000007229 HOVERGEN:HBG081426
InParanoid:Q7L014 OrthoDB:EOG441Q9T ChiTaRS:DDX46 GenomeRNAi:9879
NextBio:37233 PMAP-CutDB:Q7L014 ArrayExpress:Q7L014 Bgee:Q7L014
CleanEx:HS_DDX46 Genevestigator:Q7L014 GermOnline:ENSG00000145833
Uniprot:Q7L014
Length = 1031
Score = 370 (135.3 bits), Expect = 9.0e-33, Sum P(2) = 9.0e-33
Identities = 112/343 (32%), Positives = 166/343 (48%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
K + +CGIS + +L GY + T +Q + A + G+D + AKTG+GK+IAFLLP
Sbjct: 372 KSWVQCGISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMF 431
Query: 439 EAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
++ S + PI V I+ PTRELA QI E K G+ V+ + GGT
Sbjct: 432 RHIMDQRSLEEGE--GPIAV-IMTPTRELALQITKECKKFSKTL-GLRVVCVYGGTGISE 487
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
L+ +I+V TPGR++D + SG L + +VLDEAD + D+GF V I
Sbjct: 488 QIAELKRG-AEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRI 546
Query: 559 VDCLPRRRQSLLFSATMPK--ELVLKREHTYIDTVGLGSVETPVK-IKQSCLVAPHELHF 615
VD + RQ+++FSAT P+ E + +R + V +G ++Q +V E F
Sbjct: 547 VDNVRPDRQTVMFSATFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQQVIVIEEEKKF 606
Query: 616 QILHHLLKEHILGTPDYKVIVFCSTGM-VTSLLYLLLREMKMNVREMYSRKPQLYRDRIS 674
L LL + VI+F LL L+R ++ Q RD I
Sbjct: 607 LKLLELLGHY---QESGSVIIFVDKQEHADGLLKDLMRA-SYPCMSLHGGIDQYDRDSII 662
Query: 675 EEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 717
+F+ +LV + V+ARG+D + VV P E Y+H
Sbjct: 663 NDFKNGTCKLLVATSVAARGLDVKHLILVVNYSCPNHYEDYVH 705
Score = 71 (30.1 bits), Expect = 9.0e-33, Sum P(2) = 9.0e-33
Identities = 32/139 (23%), Positives = 57/139 (41%)
Query: 218 RRAYFSGTDKRNFCRNDGSSTRDKAGFDTGNKAKPFARNLGNNRENGDSKNMSEFMKKKC 277
RR S +R+ R+ G +R + GNK+K N ++E D S+ KK
Sbjct: 82 RRRSRSRDRRRSRSRSRGRRSRSSS---PGNKSKK-TENRSRSKEKTDGGESSKEKKKDK 137
Query: 278 FVGKRRFKRNXXXXXXXXXXXXXXXXXXKVEGWRDVKKMGSSASLGKYDMKITKRVPLK- 336
+ +++ +VE WR+ ++ + ++G+ +I + K
Sbjct: 138 DDKEDEKEKDAGNFDQNKLEEEMRKRKERVEKWREEQRKKAMENIGELKKEIEEMKQGKK 197
Query: 337 -SLEDEHDFEEQVELIRKE 354
SLED+ D E+ KE
Sbjct: 198 WSLEDDDDDEDDPAEAEKE 216
>UNIPROTKB|F1RZ83 [details] [associations]
symbol:EIF4A3 "Eukaryotic initiation factor 4A-III"
species:9823 "Sus scrofa" [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0045727 "positive regulation of
translation" evidence=IEA] [GO:0035145 "exon-exon junction complex"
evidence=IEA] [GO:0017148 "negative regulation of translation"
evidence=IEA] [GO:0008143 "poly(A) RNA binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=IEA] [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00530000062880 OMA:EDWKFDT
EMBL:CU655945 Ensembl:ENSSSCT00000018679 ArrayExpress:F1RZ83
Uniprot:F1RZ83
Length = 411
Score = 365 (133.5 bits), Expect = 1.1e-32, P = 1.1e-32
Identities = 105/341 (30%), Positives = 173/341 (50%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
FD G+ ++ + A G + Q+ + ++ +AVV +++GTGK+ F + ++
Sbjct: 40 FDTMGLREDLLRGIYAYGRPEPGAFQQRKILVVMKSNNAVVISQSGTGKTATFSISVLQC 99
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+ TQ LIL PTRELA QI +AL ++ + +GGT D
Sbjct: 100 L--DIQVRETQ------ALILAPTRELAVQIQKGLLAL-GDYMNVQCHACIGGTNVGEDI 150
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
R+L+ ++ TPGR+ D I +S +R +KMLVLDEAD +L+ GF++ + ++
Sbjct: 151 RKLDYGQ-HVVAGTPGRVFDMIRRRS---LRTRAIKMLVLDEADEMLNKGFKEQIYDVYR 206
Query: 561 CLPRRRQSLLFSATMPKELVLKREHTYIDTVGL--GSVETPVK-IKQSCL-VAPHELHFQ 616
LP Q +L SAT+P E++ D + + E ++ IKQ + V E F
Sbjct: 207 YLPPATQVVLISATLPHEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAVEREEWKFD 266
Query: 617 ILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEE 676
L L + + T + ++FC+T L +RE V M+ PQ R+ I +E
Sbjct: 267 TLCDLY-DTLTIT---QAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKE 322
Query: 677 FRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 717
FR+ +L+++DV ARG+D P V+ ++ +P +RE YIH
Sbjct: 323 FRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRELYIH 363
>RGD|1304895 [details] [associations]
symbol:Ddx31 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 31"
species:10116 "Rattus norvegicus" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 RGD:1304895
GO:GO:0005524 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
InterPro:IPR025313 Pfam:PF13959 GeneTree:ENSGT00550000075041
EMBL:CH474001 UniGene:Rn.63648 Ensembl:ENSRNOT00000064323
Uniprot:G3V9V8
Length = 682
Score = 321 (118.1 bits), Expect = 1.2e-32, Sum P(3) = 1.2e-32
Identities = 80/205 (39%), Positives = 123/205 (60%)
Query: 375 ILSQKRFDECGISPLTIKAL-TAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAF 433
+ S + F E + P I + T MT VQ+ ++ LEG+DA+V+++TG+GK++A+
Sbjct: 99 VFSPEAFQELDLHPHLISTINTVLKMSSMTSVQKQSIPVLLEGRDALVRSQTGSGKTLAY 158
Query: 434 LLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGG 493
+P +++ L+A +S + P Y L+L PTRELA Q LLK I L+GG
Sbjct: 159 CIPVVQS-LQALTSKIQRSDGP-YALVLVPTRELALQSFDTVQKLLKPFTWIVPGVLMGG 216
Query: 494 TRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRK 553
+ K ++ RL IL++TPGRL+DHI KS ++ ++ LV+DEAD +LDLGF K
Sbjct: 217 EKRKSEKARLRKG-INILISTPGRLVDHI--KSTKNIHFNRVRWLVVDEADRILDLGFEK 273
Query: 554 DVE---NIVDCLPRRRQSLLFSATM 575
DV N V+ ++RQ++L SAT+
Sbjct: 274 DVTVILNAVNAECQKRQNVLLSATL 298
Score = 110 (43.8 bits), Expect = 1.2e-32, Sum P(3) = 1.2e-32
Identities = 27/82 (32%), Positives = 40/82 (48%)
Query: 661 MYSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXX 720
++ Q R + EF S +L+ +DV++RG+D P VT +VQ P +YIH
Sbjct: 422 LHGNMKQEERTSVFHEFSHSGTGVLLCTDVASRGLDLPQVTWIVQYSAPSAPAEYIHRIG 481
Query: 721 XXXXXXXXXXXVLLLAPWE-EY 741
+L+LAP E EY
Sbjct: 482 RTARIGCHGSSLLILAPSEAEY 503
Score = 46 (21.3 bits), Expect = 1.2e-32, Sum P(3) = 1.2e-32
Identities = 15/63 (23%), Positives = 27/63 (42%)
Query: 588 IDTVGLGSVETPVKIKQSCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLL 647
+ ++ L S P + Q ++ P +L L + + D K+IVF S+ +
Sbjct: 331 VASIQLDSFAIPESLDQYVVLVPSKLRLVCLAAFILKKCKFEKDQKMIVFFSSCELVEFH 390
Query: 648 YLL 650
Y L
Sbjct: 391 YNL 393
>UNIPROTKB|F1NL04 [details] [associations]
symbol:DDX4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000237 "leptotene" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0007141 "male meiosis I"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEA]
[GO:0030317 "sperm motility" evidence=IEA] [GO:0032880 "regulation
of protein localization" evidence=IEA] [GO:0033391 "chromatoid
body" evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0048471 GO:GO:0032880 GO:GO:0003676 GO:GO:0030317
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0033391
GO:GO:0007141 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 GO:GO:0000237 EMBL:AADN02054551
EMBL:AADN02054552 EMBL:AADN02054553 IPI:IPI00578446
Ensembl:ENSGALT00000038830 Uniprot:F1NL04
Length = 542
Score = 378 (138.1 bits), Expect = 1.3e-32, P = 1.3e-32
Identities = 112/355 (31%), Positives = 186/355 (52%)
Query: 374 PILSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAF 433
P+L+ F+E + K ++ GY ++T VQ+ ++ G+D + A+TG+GK+ AF
Sbjct: 165 PLLA---FEEANFAQTLRKNISKTGYSKLTPVQKHSIPVIQAGRDLMSCAQTGSGKTAAF 221
Query: 434 LLPAIEAVLK-ATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVG 492
LLP ++ ++K ++S Q +I+ PTREL +QI EA + I + + G
Sbjct: 222 LLPIVDRMMKDGVTASAFQKQQEPQCIIVAPTRELINQIFLEARKFVYG-TCIRPVVIYG 280
Query: 493 GTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFR 552
GT+ R++ C IL ATPGRLLD IE K +S L+ +K LVLDEAD +LD+GF
Sbjct: 281 GTQTGHSIRQIMQG-CNILCATPGRLLDIIE-KGKIS--LVEVKYLVLDEADRMLDMGFG 336
Query: 553 KDVENIVDC--LPR--RRQSLLFSATMPKEL------VLKREHTYIDTVGLGSVETPVKI 602
D++ ++ +P RRQ+L+FSAT P+E+ LK ++ ++ +G + +
Sbjct: 337 LDMKKLISYPEMPSKDRRQTLMFSATFPEEVQRLAGEFLKTDYIFL-VIG-NTCGACSDV 394
Query: 603 KQSCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMY 662
+Q+ L P L +L+ T + +VF T L L + + ++
Sbjct: 395 QQNILQVPRLSKRDKLIEILQS----TGGERTMVFVDTKKKADYLAAFLCQENLPSTSIH 450
Query: 663 SRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 717
+ Q R+ +FR+ K ILV + V++RG+D +V V+ +P E Y+H
Sbjct: 451 GDREQREREIALRDFRSGKCQILVATSVASRGLDIENVQHVINFDLPNTIEDYVH 505
>UNIPROTKB|F1N5H8 [details] [associations]
symbol:DDX31 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959
GeneTree:ENSGT00550000075041 OMA:ARIGCHG EMBL:DAAA02032283
IPI:IPI00837660 UniGene:Bt.35580 ProteinModelPortal:F1N5H8
PRIDE:F1N5H8 Ensembl:ENSBTAT00000042916 Uniprot:F1N5H8
Length = 736
Score = 310 (114.2 bits), Expect = 1.4e-32, Sum P(3) = 1.4e-32
Identities = 80/227 (35%), Positives = 128/227 (56%)
Query: 375 ILSQKRFDECGISPLTIKAL-TAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAF 433
+ + F + P I + T MT VQ+ ++ LEG+DA+V+++TG+GK++A+
Sbjct: 128 VFTSDAFQALDLHPHLISTINTVLKMSSMTSVQKQSIPVLLEGRDALVRSQTGSGKTLAY 187
Query: 434 LLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGG 493
+P +++ L+A S + P Y LIL PTRELA Q LLK I L+GG
Sbjct: 188 CIPVVQS-LQAMQSKIQRGDGP-YALILVPTRELALQSFDTVQKLLKPFTWIVPGVLMGG 245
Query: 494 TRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRK 553
+ K ++ RL IL++TPGRL+DHI KS ++ ++ L+LDEAD +LDLGF K
Sbjct: 246 EKRKSEKARLRKG-INILISTPGRLVDHI--KSTKNIHFRQIRWLILDEADRILDLGFEK 302
Query: 554 DVE---NIVDCLPRRRQSLLFSATMPKELVLKREHTYIDTVGLGSVE 597
D+ N V+ + RQ++L SAT+ + + + + D V + ++
Sbjct: 303 DLTVILNAVNAECQERQNVLLSATLTEGVARLADISLHDPVSISVLD 349
Score = 120 (47.3 bits), Expect = 1.4e-32, Sum P(3) = 1.4e-32
Identities = 29/82 (35%), Positives = 42/82 (51%)
Query: 661 MYSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHXXX 720
++S Q R + ++F SK IL +D++ARG+D P VT +VQ P +YIH
Sbjct: 460 LHSALEQEERTAVFQDFTHSKTGILFCTDIAARGLDLPQVTWIVQYNAPSSPAEYIHRIG 519
Query: 721 XXXXXXXXXXXVLLLAPWE-EY 741
+L+LAP E EY
Sbjct: 520 RTARIGCHGSSLLVLAPSEAEY 541
Score = 50 (22.7 bits), Expect = 1.4e-32, Sum P(3) = 1.4e-32
Identities = 15/52 (28%), Positives = 23/52 (44%)
Query: 599 PVKIKQSCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLL 650
P ++Q +V P +L L + + D KVIVF S+ + Y L
Sbjct: 380 PAGLEQHVVVVPSKLRLVCLAAFILQKCKFERDQKVIVFFSSCELVEFHYTL 431
WARNING: HSPs involving 606 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.135 0.395 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 842 741 0.00088 121 3 11 22 0.39 34
37 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 856
No. of states in DFA: 622 (66 KB)
Total size of DFA: 366 KB (2182 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 57.47u 0.13s 57.60t Elapsed: 00:00:02
Total cpu time: 57.53u 0.13s 57.66t Elapsed: 00:00:02
Start: Sat May 11 03:14:45 2013 End: Sat May 11 03:14:47 2013
WARNINGS ISSUED: 2