BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 003178
(842 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255537383|ref|XP_002509758.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
gi|223549657|gb|EEF51145.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
Length = 771
Score = 1036 bits (2680), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 542/851 (63%), Positives = 648/851 (76%), Gaps = 95/851 (11%)
Query: 2 SSSVLLQRSKPLTNILWFNRVFARPMGGGPRTFPGGLNKWQWKRMHEKKAKEKEKRLLEQ 61
S SV+L+RSK +++ L R+F R MGGGPRTFPGGLNKWQWKR+HEK+AKEKEK LLEQ
Sbjct: 4 SISVILRRSKTVSDHLQ-TRIFTRLMGGGPRTFPGGLNKWQWKRLHEKRAKEKEKSLLEQ 62
Query: 62 EKQLYQARVRSQIRTKLFDKADPDSETNQHKPMSPDEHVKALADRFMKEGAEDLWNEDDG 121
EKQLYQAR+RSQIR+KL + D + TN + SP +H+KALADRFMKEGAEDLWNEDDG
Sbjct: 63 EKQLYQARIRSQIRSKLAGEPDSNPNTNNYSATSPKDHIKALADRFMKEGAEDLWNEDDG 122
Query: 122 PVKSEQRPRSGAEANQRPRLAGAPIDLRGLISDKRNSVNNSGNLNSGSNVKTRNYSVLSE 181
P+ S Q P+S NQR G S++R G++N+ +++
Sbjct: 123 PLTS-QLPKS----NQRSGSIG---------SNQR-----PGSINTPIDLR--------- 154
Query: 182 SKFSDRSKSASLIFMPNLECNDGETVIPSRNVMDFVRRAYFSGTDKRNFCRNDGSSTRDK 241
+ ++ +R+V +F +Y + T R + N
Sbjct: 155 -----------------------KVMLEARSVHNFENLSY-NYTKTREYSVN-------- 182
Query: 242 AGFDTGNKAKPFARNLGNNRENGDSKNMSEFMKKKCFVGK--RRFKRNESSSSDDDSDID 299
F+ G K N S+ +KK+ + + RRF+RNESSS +DD D D
Sbjct: 183 -SFNLGQK----------------QSNESDNLKKRGLISQKVRRFRRNESSSGEDDGDYD 225
Query: 300 SEDVDEKVEGWRDVKKM-GSSASLGKYDMKITKRVPLKSLEDEHDFEEQVELIRKEI-SK 357
++ EK R+V+++ GS A+LGKYD+KI+KRVPLK LE+E DFE IR E+ +K
Sbjct: 226 CDNEREK--KGRNVREIIGSRAALGKYDVKISKRVPLKELEEETDFE----FIRYELENK 279
Query: 358 NKLNGNG-EKKEKREEEPILSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEG 416
KL+ N EK E E+E IL Q+RFDECGISPLT+KALT AGY+QMTRVQEATLSACLEG
Sbjct: 280 MKLDRNDREKSEIDEQESILGQRRFDECGISPLTVKALTTAGYVQMTRVQEATLSACLEG 339
Query: 417 KDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAI 476
KDA+VKAKTGTGKS AFLLPAIEAVLKA SS+ V PIYVLILCPTRELASQIAAEA
Sbjct: 340 KDALVKAKTGTGKSAAFLLPAIEAVLKAKSSNVKPRVSPIYVLILCPTRELASQIAAEAN 399
Query: 477 ALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLK 536
A+LK HDGI V TLVGGTRFK DQ+RLE +PCQI+VATPGRLLDHIENK GLSV LMGLK
Sbjct: 400 AMLKYHDGISVQTLVGGTRFKDDQKRLEMNPCQIIVATPGRLLDHIENKGGLSVHLMGLK 459
Query: 537 MLVLDEADHLLDLGFRKDVENIVDCLPRRRQSLLFSATMPKE------LVLKREHTYIDT 590
ML+LDEADHLLDLGFRKDVE I+DCLPR R SL+FSAT+PKE LVLKREH +IDT
Sbjct: 460 MLILDEADHLLDLGFRKDVEKIIDCLPRERHSLMFSATIPKEVRRISQLVLKREHAFIDT 519
Query: 591 VGLGSVETPVKIKQSCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLL 650
VGLGSVETP K+KQ +V PHELHFQ++HH LKEHIL TPDYKVIVFC+TGMVTSL+Y L
Sbjct: 520 VGLGSVETPSKVKQFSVVVPHELHFQVVHHFLKEHILQTPDYKVIVFCTTGMVTSLMYTL 579
Query: 651 LREMKMNVREMYSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPP 710
LREMKMNV+E++SRKPQLYR R+S+EFR S+R ILV+SDVSARGM+YPDVT V+QVG+P
Sbjct: 580 LREMKMNVKEIHSRKPQLYRTRVSDEFRESRRSILVSSDVSARGMNYPDVTLVIQVGLPT 639
Query: 711 DREQYIHRLGRTGREGKEGEGVLLLAPWEEYFLDDLKDLPLDKLQLPHLNPEIQLQMDNH 770
DREQYIHRLGRTGREGK+GEG+LLLAPWEEYFLD+L+DLPLDKL +P ++PE +L++++
Sbjct: 640 DREQYIHRLGRTGREGKDGEGILLLAPWEEYFLDELEDLPLDKLPIPDIDPETKLKVEDS 699
Query: 771 MAKIDNNVKEAAYHAWLGYYNSIREIGRDKTTLVELANKFAQSIGLQRPPPLFRKTALKM 830
M+KID++VKEAAYHAWLGYYNSIR+IGRDKTTLVELAN+F +SIGLQRPPPLFRKTALKM
Sbjct: 700 MSKIDSSVKEAAYHAWLGYYNSIRKIGRDKTTLVELANRFCESIGLQRPPPLFRKTALKM 759
Query: 831 GLKDIPGIRLR 841
GLK+IPGIR+R
Sbjct: 760 GLKNIPGIRIR 770
>gi|449452480|ref|XP_004143987.1| PREDICTED: putative DEAD-box ATP-dependent RNA helicase 33-like
[Cucumis sativus]
gi|449495891|ref|XP_004159976.1| PREDICTED: putative DEAD-box ATP-dependent RNA helicase 33-like
[Cucumis sativus]
Length = 813
Score = 1011 bits (2613), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 527/868 (60%), Positives = 653/868 (75%), Gaps = 81/868 (9%)
Query: 1 MSSSVLLQRSKPLTNILWFNRVFARPMGGGPRTFPGGLNKWQWKRMHEKKAKEKEKRLLE 60
M+SSVLL R + +++L +F+R MGGGPRTFPGGLNKWQWKRMHEK+AKEKEKRLLE
Sbjct: 1 MTSSVLLDRHRTFSSLLC-KLIFSRSMGGGPRTFPGGLNKWQWKRMHEKRAKEKEKRLLE 59
Query: 61 QEKQLYQARVRSQIRTKLF-------DKADPDSETNQHKPMSPDEHVKALADRFMKEGAE 113
QEKQLYQAR+RS IR+KL + +DP + + P SP EH+ LA+RFMK+GA
Sbjct: 60 QEKQLYQARIRSDIRSKLVGAHETSKNNSDP---STSYSPKSPSEHINDLANRFMKQGAI 116
Query: 114 DLWNEDDGPVKSEQRPRSGAEANQRPRLAG--------APIDLRGLISDKRNSVNNSGNL 165
DLWNEDDGP+K+ PR A R+A +PID++ L+++ + S +
Sbjct: 117 DLWNEDDGPLKTPL-PRPAALNEGSRRIASNVRSGSIRSPIDVKRLLAENHDGFVGSHYM 175
Query: 166 N-SGSNVKTRNYSVLSESKFSDRSKSASLIFMPNLECNDGETVIPSRNVMDFVRRAYFSG 224
+G NVK R+YSV S
Sbjct: 176 GLNGDNVKGRSYSVQS-------------------------------------------- 191
Query: 225 TDKRNFCRNDGSSTRDKAGFDTG-NKAKPFARNLGNNRE-NGDSKNMSEFMKKKCFVGKR 282
+R+F RN+ SS+ D +++G + KPFA L + + N S+N++ + V +R
Sbjct: 192 --RRSFRRNESSSSDDDMDYNSGVDSIKPFANKLARSPDRNAKSRNLNGISNDRKAVPQR 249
Query: 283 RFK--RNESSSSDDDSDIDSEDVDEKVEGWRDVKKMGSSASLGKYDMKITKRVPLKSLED 340
+ K RN S SSDDDS+ + +VD+ + W+ +K GSSASLGK D+++ KRVPLK ++
Sbjct: 250 KMKFWRNGSLSSDDDSEEEFGNVDKDLRSWKGLK-TGSSASLGKCDVRMKKRVPLKPFDE 308
Query: 341 EHDFEEQVELIRKEISKNKLNGNGEKKEKREEEPILSQKRFDECGISPLTIKALTAAGYI 400
E DF EQVEL+R E+SK E++ ++ EE I ++KRFDECGISPLT+KAL+ +GY+
Sbjct: 309 ESDFAEQVELLRYELSKK---SAAEEEGEKREEIIFTEKRFDECGISPLTVKALSFSGYV 365
Query: 401 QMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLVPPIYVLI 460
+MTRVQEATLS CLEGKD +VK+KTG+GKS+AFLLPAIEAVLKA SS+ Q VPPI+VLI
Sbjct: 366 RMTRVQEATLSLCLEGKDTLVKSKTGSGKSVAFLLPAIEAVLKAACSSSNQRVPPIFVLI 425
Query: 461 LCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLD 520
LCPTRELA QIAAEA LLK HDGIGV TLVGGTRFK DQ+RLES P QI+VATPGRLLD
Sbjct: 426 LCPTRELACQIAAEANVLLKYHDGIGVQTLVGGTRFKDDQKRLESFPSQIIVATPGRLLD 485
Query: 521 HIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQSLLFSATMPKE-- 578
H+EN+SGLS+RLMGLKML+LDEADHLLDLGFRKD+E IVDCLPR+RQSLLFSAT+P+E
Sbjct: 486 HVENRSGLSLRLMGLKMLILDEADHLLDLGFRKDIEKIVDCLPRQRQSLLFSATIPREVR 545
Query: 579 ----LVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILHHLLKEHILGTPDYKV 634
LVLKREH +++ VG+G VETPV++KQSCL+APH HFQI+ HLLKEHI TPDYKV
Sbjct: 546 RISQLVLKREHVFVNNVGIGCVETPVQVKQSCLIAPHGSHFQIVCHLLKEHISCTPDYKV 605
Query: 635 IVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEFRASKRLILVTSDVSARG 694
IVFC+TGMVTSLL++L REMKMNVREM+SRKPQLYR RIS+EF+ S++LILVTSDVSARG
Sbjct: 606 IVFCTTGMVTSLLHVLFREMKMNVREMHSRKPQLYRTRISDEFKQSRQLILVTSDVSARG 665
Query: 695 MDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLAPWEEYFLDDLKDLPLDKL 754
M+YPDVT V+Q+GIP DREQYIHRLGRTGREGKEG+G+LL+APWEEYFL++LKDLPL++
Sbjct: 666 MNYPDVTLVLQLGIPSDREQYIHRLGRTGREGKEGQGILLIAPWEEYFLEELKDLPLERR 725
Query: 755 QLPHLNPEIQLQMDNHMAKIDNNVKEAAYHAWLGYYNSIREIGRDKTTLVELANKFAQSI 814
+LP L+ ++L+++ MAKID ++KE AYHAWLGYYNSIR IGRDKTTLVEL +F++SI
Sbjct: 726 RLPQLDSGLKLKVEESMAKIDTSIKEGAYHAWLGYYNSIRGIGRDKTTLVELGKQFSESI 785
Query: 815 GLQRPPPLFRKTALKMGLKDIPGIRLRK 842
GLQ PP LFRKTALKMGLKDIPGIR+RK
Sbjct: 786 GLQNPPALFRKTALKMGLKDIPGIRVRK 813
>gi|224074899|ref|XP_002304481.1| predicted protein [Populus trichocarpa]
gi|222841913|gb|EEE79460.1| predicted protein [Populus trichocarpa]
Length = 798
Score = 988 bits (2553), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 545/855 (63%), Positives = 640/855 (74%), Gaps = 79/855 (9%)
Query: 6 LLQRSKPLTNILWFNRVFARPMGGGPRTFPGGLNKWQWKRMHEKKAKEKEKRLLEQEKQL 65
LL+RSK L+ L RV R MGGGP +FPGGLNKWQWKR+HEKKAKEKEKRLL+QEKQL
Sbjct: 5 LLRRSKFLSEQLR-TRVVIRLMGGGPLSFPGGLNKWQWKRLHEKKAKEKEKRLLDQEKQL 63
Query: 66 YQARVRSQIRTKLFDKADPD--SETNQHKPMSPDEHVKALADRFMKEGAEDLWNEDDG-- 121
+Q R+RSQIR+ L ++ P+ + N++ PMSP+EH+KALADRFMK+GAEDLWNE+DG
Sbjct: 64 FQDRMRSQIRSNLAGQSHPNLNPDPNKYNPMSPNEHLKALADRFMKDGAEDLWNENDGSL 123
Query: 122 -PVKSEQRPRSGAEANQRPRLAGAPIDLRGLISDKRNSVNNSGNLNSGSNVKTRNYSVLS 180
P EQ G NQ+P +P+DLR LIS+ +YS+L
Sbjct: 124 KPPSDEQTEFVGT--NQQPGSIHSPVDLRKLISEG-------------------HYSMLR 162
Query: 181 ESKFSDRSKSASLIFMPNLECNDGETVIPSRNVMDFVRRAYFSGTDKRNFCRNDGSSTRD 240
+ F + G++ P RR +R F N+ SS+ D
Sbjct: 163 DLGFE----------------SGGDSTKP------LARR-------QRKFRINESSSSDD 193
Query: 241 KA--GFDTGNKAKPFARNLGNNREN-GDSKNMSEFMKKKC--FVGKRRFKRNESSSSDDD 295
GF +K K F + N R + +N+S+FMK + V +RRF+RNES D
Sbjct: 194 DEDHGF-VNDKVKNFVGDSWNERGGVSNLRNVSDFMKNRGSETVKQRRFQRNESDDED-- 250
Query: 296 SDIDSEDVDEKVEGWRDVKKMGSSASLGKYDMKITKRVPLKSLEDEHDFEEQVELIRKEI 355
+ R +GS A+LGKYDMK T+RVPLK L D++DF +VELIR E+
Sbjct: 251 ----EDLEGGGDRRGRSATDIGSRAALGKYDMKKTRRVPLKEL-DKNDFANEVELIRYEL 305
Query: 356 S-KNKLNGNGEKKEKREEEPILSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACL 414
K K GN + +K EE+ ILS+KRFDECG+SPLT+KAL AAGY+QMTRVQEATLS CL
Sbjct: 306 GRKKKFAGN--EGDKEEEDSILSEKRFDECGLSPLTVKALIAAGYVQMTRVQEATLSVCL 363
Query: 415 E-GKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAA 473
E GKDA+VKAKTGTGKS AFLLPAIEAVLKATSS+ V PIY LILCPTRELASQIAA
Sbjct: 364 EAGKDAMVKAKTGTGKSAAFLLPAIEAVLKATSSNDKPQVSPIYALILCPTRELASQIAA 423
Query: 474 EAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLM 533
EA A+LK HDGIGVLTLVGGTRFK DQRRLESDP QI+VATPGRLLDHIENK GLSV LM
Sbjct: 424 EANAMLKYHDGIGVLTLVGGTRFKDDQRRLESDPYQIIVATPGRLLDHIENKGGLSVHLM 483
Query: 534 GLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQSLLFSATMPKE------LVLKREHTY 587
GLK+L+LDEADHLLDLGFRKD+E I+DCLPR+RQSLLFSAT+PKE LVLKREH +
Sbjct: 484 GLKVLILDEADHLLDLGFRKDMEKILDCLPRQRQSLLFSATIPKEVRRISQLVLKREHAF 543
Query: 588 IDTVGLGSVETPVKIKQSCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLL 647
I+TVG+G VETP KIKQS LV+PH LHFQ++HHLLKEHIL PDYKVIVFC+TGMVTSL+
Sbjct: 544 INTVGVGCVETPAKIKQSFLVSPHRLHFQVVHHLLKEHILQAPDYKVIVFCTTGMVTSLM 603
Query: 648 YLLLREMKMNVREMYSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVG 707
YLLLREM MNVREM+SRKPQLYR R+S EFR SKRLILVTSDVSARGM+YPDVT V+QVG
Sbjct: 604 YLLLREMNMNVREMHSRKPQLYRTRVSNEFRESKRLILVTSDVSARGMNYPDVTLVIQVG 663
Query: 708 IPPDREQYIHRLGRTGREGKEGEGVLLLAPWEEYFLDDLKDLPLDKLQLPHLNPEIQLQM 767
IP DRE YIHRLGRTGREGK+GEG+LLLAPWEEYFL++LKDLPL+K LP ++ E +M
Sbjct: 664 IPYDREHYIHRLGRTGREGKDGEGILLLAPWEEYFLNELKDLPLEKFPLPQIDSETNFKM 723
Query: 768 DNHMAKIDNNVKEAAYHAWLGYYNSIREIGRDKTTLVELANKFAQSIGLQRPPPLFRKTA 827
+ M+KID++VKE AYHAWLGYYNSIREIGRDKTTLVELAN+F++SIGL +PP LFRKTA
Sbjct: 724 EESMSKIDSSVKEGAYHAWLGYYNSIREIGRDKTTLVELANQFSESIGLHKPPSLFRKTA 783
Query: 828 LKMGLKDIPGIRLRK 842
LKMGLKDIPGIR+R+
Sbjct: 784 LKMGLKDIPGIRIRR 798
>gi|224053943|ref|XP_002298050.1| predicted protein [Populus trichocarpa]
gi|222845308|gb|EEE82855.1| predicted protein [Populus trichocarpa]
Length = 784
Score = 950 bits (2456), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 530/851 (62%), Positives = 629/851 (73%), Gaps = 85/851 (9%)
Query: 6 LLQRSKPLTNILWFNRVFARPMGGGPRTFPGGLNKWQWKRMHEKKAKEKEKRLLEQEKQL 65
L+ RSK L+ L R+F R MGGGPRTFPGGLNKWQWKR+HEKKAKEKEKRLL+QEKQL
Sbjct: 5 LIHRSKSLSEQLR-TRIFIRLMGGGPRTFPGGLNKWQWKRLHEKKAKEKEKRLLDQEKQL 63
Query: 66 YQARVRSQIRTKLFDKADPD--SETNQHKPMSPDEHVKALADRFMKEGAEDLWNEDDGPV 123
YQAR+RS IR+KL + DP+ + ++ PMSP EH+KALADRFMKEGAEDLWNE DGP+
Sbjct: 64 YQARMRSNIRSKLAGQPDPNLNPDPSKFNPMSPKEHIKALADRFMKEGAEDLWNEMDGPL 123
Query: 124 KSEQRPRSGAEANQRPRLAGAPIDLRGLISDKRNSVNNSGNLNSGSNVKTRNYSVLSESK 183
K A +++RP G +++R G++NS +++ ++SE +
Sbjct: 124 K--------APSDERPGFVG---------TNQR-----PGSINSPLDLR----KLMSEGR 157
Query: 184 FSDRSKSASLIFMPNLECNDGETVIPSRNVMDFVRRAYFSGTDKRNFCRNDGSSTRDKAG 243
R + + G + R F N+ SS+ D
Sbjct: 158 NVSRHREEN-------------------------------GFNYRKFRINESSSSDDDED 186
Query: 244 FDTGN-KAKPFARNLGNNREN-GDSKNMSEFMKKKCF--VGKRRFKRNESSSSDDDSDID 299
+ N K F R+ GN R +S+N+SEFMK K F +RRF RNES +D
Sbjct: 187 YGFVNDKVMNFGRDSGNERGAVSNSRNVSEFMKNKGFETQKQRRFGRNES--------VD 238
Query: 300 SEDVDEKVEGWRDVKKMGSSASLGKYDMKITKRVPLKSLEDEHDFEEQVELIRKEIS-KN 358
E E+ R K++GS +LGKYD+K T+RVP K LE ++DF +VELIR E+ K
Sbjct: 239 LEGGGERR--GRSAKEIGSRDALGKYDVKKTRRVPSKELE-KNDFANEVELIRYELGRKK 295
Query: 359 KLNGNGEKKEKREEEPILSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLE-GK 417
KL GN E +E+ ILS KRFDECG+SPLT+KALTAAGY+QMTRVQEATLS CLE GK
Sbjct: 296 KLAGNDGDNE--DEDSILSDKRFDECGLSPLTVKALTAAGYVQMTRVQEATLSVCLEAGK 353
Query: 418 DAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIA 477
DA+VKAKTG GKS AFLLPAIEAVLKA SS+ V PIYVLILCPTRELASQIAAEA A
Sbjct: 354 DAMVKAKTGKGKSAAFLLPAIEAVLKARSSNAKLRVSPIYVLILCPTRELASQIAAEANA 413
Query: 478 LLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKM 537
+LK HDGI + TLVGGTRFK DQR LESDPCQILVATPGRLLDHIENKSGLS+ L GLKM
Sbjct: 414 ILKYHDGIVMQTLVGGTRFKDDQRCLESDPCQILVATPGRLLDHIENKSGLSMHLKGLKM 473
Query: 538 LVLDEADHLLDLGFRKDVENIVDCLPRRRQSLLFSATMPKE------LVLKREHTYIDTV 591
L+LDEADHLLDLGFRKDVE IVDCLPR+RQSLLFSAT+PKE LVLKREH +++TV
Sbjct: 474 LILDEADHLLDLGFRKDVEKIVDCLPRQRQSLLFSATIPKEVHRISQLVLKREHDFVNTV 533
Query: 592 GLGSVETPVKIKQSCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLL 651
G+ +ETP KIKQS LV+PHELHFQ++H+LLKEHI PDYKVIVFC+TGMVTSL+YLLL
Sbjct: 534 GVSCMETPAKIKQSFLVSPHELHFQVVHYLLKEHIQKAPDYKVIVFCTTGMVTSLMYLLL 593
Query: 652 REMKMNVREMYSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPD 711
REMKMNVREM+SRKPQLYR R+S+EF+ S RL+LVTSDVSA GM+YPDVT V+QVGIP D
Sbjct: 594 REMKMNVREMHSRKPQLYRTRVSDEFQESNRLVLVTSDVSACGMNYPDVTLVIQVGIPCD 653
Query: 712 REQYIHRLGRTGREGKEGEGVLLLAPWEEYFLDDLKDLPLDKLQLPHLNPEIQLQMDNHM 771
REQYI RLGR G EGK+G G+LLLAPWEEYFLD+LKDLPLDK+ +P + + M
Sbjct: 654 REQYIDRLGRIGHEGKDGGGILLLAPWEEYFLDELKDLPLDKVLVPLIYLLSGHAISQSM 713
Query: 772 AKIDNNVKEAAYHAWLGYYNSIREIGRDKTTLVELANKFAQSIGLQRPPPLFRKTALKMG 831
+KID++VKE AYHAWL YYNSIREIGRDKT+LV+LAN+F++SIGLQ+PP L RKTALKMG
Sbjct: 714 SKIDSSVKEGAYHAWLDYYNSIREIGRDKTSLVDLANRFSESIGLQKPPSLCRKTALKMG 773
Query: 832 LKDIPGIRLRK 842
LKDIPGIR+R+
Sbjct: 774 LKDIPGIRIRR 784
>gi|15221724|ref|NP_176514.1| putative DEAD-box ATP-dependent RNA helicase 48 [Arabidopsis
thaliana]
gi|75333533|sp|Q9C8S9.1|RH48_ARATH RecName: Full=Probable DEAD-box ATP-dependent RNA helicase 48
gi|12324351|gb|AAG52143.1|AC022355_4 putative RNA helicase; 42376-45543 [Arabidopsis thaliana]
gi|332195955|gb|AEE34076.1| putative DEAD-box ATP-dependent RNA helicase 48 [Arabidopsis
thaliana]
Length = 798
Score = 948 bits (2450), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 493/855 (57%), Positives = 622/855 (72%), Gaps = 70/855 (8%)
Query: 1 MSSSVLLQRSKPLTNILWFNRVFARPMGGGPRTFPGGLNKWQWKRMHEKKAKEKEKRLLE 60
M S +L +RS +T LW NR+ +R MGGGPRTFPGGLNKWQWKRMHEKKA+EKE +LL+
Sbjct: 1 MYSLILRERSGSITGSLW-NRISSRNMGGGPRTFPGGLNKWQWKRMHEKKAREKENKLLD 59
Query: 61 QEKQLYQARVRSQIRTKLFDKADPDSET----NQHKPMSPDEHVKALADRFMKEGAEDLW 116
QEKQLY+AR+R++IR K++ D +T H PMSP EH+K LADRFMK GAED W
Sbjct: 60 QEKQLYEARIRTEIRAKMWGNPDSGEKTAKSKQSHGPMSPKEHIKTLADRFMKAGAEDFW 119
Query: 117 NEDDGPV-KSEQRPRSGAEANQRPRLAGAPIDLRGLISDKRNSVNNSGNLNSGSNVKTRN 175
NE+DGPV KS+Q RSG+++ + +PID+R L+S +S+ + S R
Sbjct: 120 NENDGPVKKSDQGSRSGSDSIDST--SNSPIDVRRLVSATCDSMGKNRVFGSSR----RG 173
Query: 176 YSVLSESKFSDRSKSASLIFMPNLECNDGETVIPSRNVMDFVRRAYFSGTDKRNFCRNDG 235
+S +S K ++ S C++G+ DF
Sbjct: 174 FSSMSRFKRNESS------------CDEGD---------DF------------------- 193
Query: 236 SSTRDKAGFDTGNKAKPFARNLGNNREN-GDSKNMSEFMKKKCFVGKRRFKRNESSSSDD 294
D DT PF+ +E S+++ ++ K G+R+F++N+SS+
Sbjct: 194 ----DAKKLDT---LSPFSPKFAGTKEKVKSSRSVVGVIRNKGLFGRRKFRKNDSSTE-- 244
Query: 295 DSDIDSEDVDEKVEGWRDVKKMGSSASLGKYDMKITKRVPLKSLEDEHDFEEQVELIRKE 354
D D E + K+ GW D++K GSSASLG +D+K+TKRV ++E + +R++
Sbjct: 245 -EDSDEEGDEGKMIGWMDMRKTGSSASLGNHDIKLTKRVNRNVTDEELYPPLDINTVRED 303
Query: 355 ISKNKLNGNGEKKEKREEEPILSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACL 414
+SK K N ++++ + I S KRFDE ISPLT+KAL+A+G ++MTRVQ+ATLS CL
Sbjct: 304 LSKRKSVDNVMEEKQEPHDSIYSAKRFDESCISPLTLKALSASGILKMTRVQDATLSECL 363
Query: 415 EGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSST-TQLVPPIYVLILCPTRELASQIAA 473
+GKDA+VKAKTGTGKS+AFLLPAIE VLKA +S V PI+ LILCPTRELASQIAA
Sbjct: 364 DGKDALVKAKTGTGKSMAFLLPAIETVLKAMNSGKGVNKVAPIFALILCPTRELASQIAA 423
Query: 474 EAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLM 533
E ALLK HDGIGV TL+GGTRFK+DQ+RLES+PCQIL+ATPGRLLDHIENKSGL+ RLM
Sbjct: 424 EGKALLKFHDGIGVQTLIGGTRFKLDQQRLESEPCQILIATPGRLLDHIENKSGLTSRLM 483
Query: 534 GLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQSLLFSATMPKE------LVLKREHTY 587
LK+ ++DEAD LLDLGFR+DVE I+DCLPR+RQSLLFSAT+PKE LVLKR+H+Y
Sbjct: 484 ALKLFIVDEADLLLDLGFRRDVEKIIDCLPRQRQSLLFSATIPKEVRRVSQLVLKRDHSY 543
Query: 588 IDTVGLGSVETPVKIKQSCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLL 647
IDT+GLG VET K++QSC+VAPHE HF ++ HLLKEHI TPDYK+IVFCSTGMVTSL+
Sbjct: 544 IDTIGLGCVETHDKVRQSCIVAPHESHFHLVPHLLKEHINNTPDYKIIVFCSTGMVTSLM 603
Query: 648 YLLLREMKMNVREMYSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVG 707
Y LLREMK+NVRE+++RKPQL+R R+S+EF+ S RLILVTSDVSARGM+YPDVT V+QVG
Sbjct: 604 YTLLREMKLNVREIHARKPQLHRTRVSDEFKESNRLILVTSDVSARGMNYPDVTLVIQVG 663
Query: 708 IPPDREQYIHRLGRTGREGKEGEGVLLLAPWEEYFLDDLKDLPLDKLQLPHLNPEIQLQM 767
IP DREQYIHRLGRTGREGK GEG+LL+APWE YFLD+LKDLPL+ + P L+ ++ Q+
Sbjct: 664 IPSDREQYIHRLGRTGREGKGGEGLLLIAPWERYFLDELKDLPLEPIPAPDLDSIVKHQV 723
Query: 768 DNHMAKIDNNVKEAAYHAWLGYYNSIREIGRDKTTLVELANKFAQSIGLQRPPPLFRKTA 827
D MAKID ++KEAAYHAWLGYYNS+RE GRDKTTL ELAN+F SIGL++PP LFR+TA
Sbjct: 724 DQSMAKIDTSIKEAAYHAWLGYYNSVRETGRDKTTLAELANRFCHSIGLEKPPALFRRTA 783
Query: 828 LKMGLKDIPGIRLRK 842
+KMGLK I GI +RK
Sbjct: 784 VKMGLKGISGIPIRK 798
>gi|15226161|ref|NP_178818.1| putative DEAD-box ATP-dependent RNA helicase 33 [Arabidopsis
thaliana]
gi|75318697|sp|O80792.1|RH33_ARATH RecName: Full=Putative DEAD-box ATP-dependent RNA helicase 33
gi|3327394|gb|AAC26676.1| putative RNA helicase [Arabidopsis thaliana]
gi|330251036|gb|AEC06130.1| putative DEAD-box ATP-dependent RNA helicase 33 [Arabidopsis
thaliana]
Length = 845
Score = 942 bits (2435), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 482/839 (57%), Positives = 612/839 (72%), Gaps = 73/839 (8%)
Query: 17 LWFNRVFARPMGGGPRTFPGGLNKWQWKRMHEKKAKEKEKRLLEQEKQLYQARVRSQIRT 76
LW NR+F+R MGGGPRTFPGGLNKWQWKRMHEKKA+EKE +LL+QEKQLY+AR+R++IR
Sbjct: 67 LW-NRIFSRNMGGGPRTFPGGLNKWQWKRMHEKKAREKENKLLDQEKQLYEARIRTEIRA 125
Query: 77 KLFDKADPDSET----NQHKPMSPDEHVKALADRFMKEGAEDLWNEDDGPVKS-EQRPRS 131
K++ D +T H PMSP EH+K LADRFMK GA+DLWN++DGPVK +Q RS
Sbjct: 126 KMWGHPDSGEKTAKLKQSHGPMSPKEHIKTLADRFMKAGADDLWNDNDGPVKKFDQGSRS 185
Query: 132 GAEANQRPRLAGAPIDLRGLISDKRNSVNNSGNLNSGSNVKTRNYSVLSESKFSDRSKSA 191
+++ + PID+R L+S +S+ L+S R +S +S K ++ S
Sbjct: 186 CSDS-----IDSTPIDVRRLVSATCDSMGKHRVLDSSR----RGFSSMSRFKRNESS--- 233
Query: 192 SLIFMPNLECNDGETVIPSRNVMDFVRRAYFSGTDKRNFCRNDGSSTRDKAGFDTGNKAK 251
C++G+ V D DT
Sbjct: 234 ---------CDEGDDV--------------------------------DAKKLDT---LS 249
Query: 252 PFARNLGNNREN-GDSKNMSEFMKKKCFVGKRRFKRNESSSSDDDSDIDSEDVDEKVEGW 310
PF+ +E S ++ ++ K G+R+F++N+SS+ +D D E + K+ GW
Sbjct: 250 PFSPKFSGTKEKVKSSTSVVGVIRNKGLFGRRKFRKNDSSTEEDS---DEEGNEGKMIGW 306
Query: 311 RDVKKMGSSASLGKYDMKITKRVPLKSLEDEHDFEEQVELIRKEISKNKLNGNGEKKEKR 370
D++K GSSASLG +D+K+TKRV ++E + +R+++SK + N ++++
Sbjct: 307 MDLRKTGSSASLGNHDIKLTKRVNRNVTDEELYPPLDINRVREDLSKKQSVDNVMEEKQE 366
Query: 371 EEEPILSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKS 430
+ I S KRFDE ISPLT+KAL+A+G ++MTRVQ+ATLS CL+GKDA+VKAKTGTGKS
Sbjct: 367 PHDSIYSAKRFDESCISPLTLKALSASGIVKMTRVQDATLSECLDGKDALVKAKTGTGKS 426
Query: 431 IAFLLPAIEAVLKATSSST-TQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLT 489
+AFLLPAIE VLKA +S V PI+VLILCPTRELASQIAAE ALLKNHDGIGV T
Sbjct: 427 MAFLLPAIETVLKAMNSGKGVHKVAPIFVLILCPTRELASQIAAEGKALLKNHDGIGVQT 486
Query: 490 LVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDL 549
L+GGTRF++DQ+RLES+PCQIL+ATPGRLLDHIENKSGL+ RLM LK+ ++DEAD LLDL
Sbjct: 487 LIGGTRFRLDQQRLESEPCQILIATPGRLLDHIENKSGLTSRLMALKLFIVDEADLLLDL 546
Query: 550 GFRKDVENIVDCLPRRRQSLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIK 603
GF++DVE I+DCLPR+RQSLLFSAT+PKE LVLKR+H+YIDT+GLG VET K+K
Sbjct: 547 GFKRDVEKIIDCLPRQRQSLLFSATIPKEVRRVSQLVLKRDHSYIDTIGLGCVETHDKVK 606
Query: 604 QSCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYS 663
QSC+VAPHE HF ++ HLLKEHI PDYK+IVFCSTGMVTSL+Y LLREMK+NVRE+++
Sbjct: 607 QSCIVAPHESHFHLVPHLLKEHINNMPDYKIIVFCSTGMVTSLMYTLLREMKLNVREIHA 666
Query: 664 RKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTG 723
RKPQL+R +S+EF+ S RLILVTSDVSARGM+YPDVT V+QVGIP DREQYIHRLGRTG
Sbjct: 667 RKPQLHRTCVSDEFKESNRLILVTSDVSARGMNYPDVTLVIQVGIPSDREQYIHRLGRTG 726
Query: 724 REGKEGEGVLLLAPWEEYFLDDLKDLPLDKLQLPHLNPEIQLQMDNHMAKIDNNVKEAAY 783
REGK G+G+LL+APWE YFLD+LKDLPL+ + P L+ ++ Q+D MAKID ++KEAAY
Sbjct: 727 REGKGGKGLLLIAPWERYFLDELKDLPLEPIPAPDLDSRVKHQVDQSMAKIDTSIKEAAY 786
Query: 784 HAWLGYYNSIREIGRDKTTLVELANKFAQSIGLQRPPPLFRKTALKMGLKDIPGIRLRK 842
HAWLGYYNS+RE GRDKTTL ELAN+F SIGL++PP LFR+TA+KMGLK I GI +RK
Sbjct: 787 HAWLGYYNSVRETGRDKTTLAELANRFCHSIGLEKPPALFRRTAVKMGLKGISGIPIRK 845
>gi|297837071|ref|XP_002886417.1| hypothetical protein ARALYDRAFT_893124 [Arabidopsis lyrata subsp.
lyrata]
gi|297332258|gb|EFH62676.1| hypothetical protein ARALYDRAFT_893124 [Arabidopsis lyrata subsp.
lyrata]
Length = 808
Score = 937 bits (2421), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 493/856 (57%), Positives = 618/856 (72%), Gaps = 62/856 (7%)
Query: 1 MSSSVLLQRSKPLTNILWFNRVFARPMGGGPRTFPGGLNKWQWKRMHEKKAKEKEKRLLE 60
M S +L +RS T LW +R+F+R MGGGPRTFPGGLNKWQWKRMHEKKA+EKE +LL+
Sbjct: 1 MYSLILRERSGSFTGSLW-SRIFSRNMGGGPRTFPGGLNKWQWKRMHEKKAREKENKLLD 59
Query: 61 QEKQLYQARVRSQIRTKLFDKADPDSET----NQHKPMSPDEHVKALADRFMKEGAEDLW 116
QEKQLY+AR+R++IR K++ D +T H PMSP EH+K LADRFMK GAEDLW
Sbjct: 60 QEKQLYEARIRTEIRAKMWGNPDSGEKTAKSKQSHGPMSPKEHIKTLADRFMKAGAEDLW 119
Query: 117 NEDDGPVKSEQRPRSGAEANQRPRLAGAPIDLRGLISDKRNSVNNSGNLNSGSNVKTRNY 176
NE+DGP+K SD + ++ N SGSN +
Sbjct: 120 NENDGPMKE---------------------------SDDGSGLSRRDNGRSGSNSIDSSS 152
Query: 177 SVLSESKFSDRSKSASLIFMPNLECNDGETVIPSRNVMDFVRRAYFSGTDKRNFCRNDGS 236
+ + + + S + M N V D RR FS + F RN+ S
Sbjct: 153 NSSIDVR---KLVSGTCYSMGN------------SRVFDRSRRG-FSSMSRGRFKRNE-S 195
Query: 237 STRDKAGFDTG--NKAKPFARNLGNNREN-GDSKNMSEFMKKKCFVGKRRFKRNESSSSD 293
S + FD + PF+ +E SKN+ ++ K G+R+F++N+SS+ +
Sbjct: 196 SCDEGDDFDAKKLDTLSPFSPKFAGTKEKVKSSKNVVGVIRNKGLFGRRKFRKNDSSTEE 255
Query: 294 DDSDIDSEDVDEKVEGWRDVKKMGSSASLGKYDMKITKRVPLKSLEDEHDFEEQVELIRK 353
D E + K+ W D++KMGSSA+LG +D+K+TKRV ++E + +R+
Sbjct: 256 DSE---EEGEEGKMNVWLDLRKMGSSAALGNHDIKLTKRVNRNVTDEELYPPLDINTVRE 312
Query: 354 EISKNKLNGNGEKKEKREEEPILSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSAC 413
++SK K N ++ + + I S KRFDE ISPLT+KAL+A+G ++MTRVQ+ATLS C
Sbjct: 313 DLSKRKSVDNVIEENREPHDSIYSGKRFDESSISPLTLKALSASGIVKMTRVQDATLSEC 372
Query: 414 LEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSST-TQLVPPIYVLILCPTRELASQIA 472
L+GKDA+VKAKTGTGKS+AFLLPAIE VLKA +S V PI+ LILCPTRELASQIA
Sbjct: 373 LDGKDALVKAKTGTGKSMAFLLPAIETVLKAMNSGNGVHKVAPIFALILCPTRELASQIA 432
Query: 473 AEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRL 532
AE ALLK HDGIGV TL+GGTRFK+DQ+RLES+PCQIL+ATPGRLLDHIENKSGL+ RL
Sbjct: 433 AEGKALLKYHDGIGVQTLIGGTRFKLDQQRLESEPCQILIATPGRLLDHIENKSGLTSRL 492
Query: 533 MGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQSLLFSATMPKE------LVLKREHT 586
M LK+ ++DEAD LLDLGFR+DVE I+DCLPR+RQSLLFSAT+PKE LVLKR+H+
Sbjct: 493 MALKLFIVDEADLLLDLGFRRDVEKIIDCLPRQRQSLLFSATIPKEVRRVSQLVLKRDHS 552
Query: 587 YIDTVGLGSVETPVKIKQSCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSL 646
YIDT+GLG VET K+KQSC+VAPHE HF ++ HLLKEHI TPDYK+IVFCSTGMVTSL
Sbjct: 553 YIDTIGLGCVETHDKVKQSCIVAPHESHFHLVPHLLKEHINNTPDYKIIVFCSTGMVTSL 612
Query: 647 LYLLLREMKMNVREMYSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQV 706
+Y LLREMK++VRE+++RKPQL+R R+S+EF+ SKRLILVTSDVSARGM+YPDVT V+QV
Sbjct: 613 MYTLLREMKLSVREIHARKPQLHRTRVSDEFKESKRLILVTSDVSARGMNYPDVTLVIQV 672
Query: 707 GIPPDREQYIHRLGRTGREGKEGEGVLLLAPWEEYFLDDLKDLPLDKLQLPHLNPEIQLQ 766
GIP DREQYIHRLGRTGREGK GEG+LL+APWE YFLD+LKDLPL+ + +P L+ ++LQ
Sbjct: 673 GIPSDREQYIHRLGRTGREGKGGEGLLLIAPWERYFLDELKDLPLEPIPVPDLDSRVKLQ 732
Query: 767 MDNHMAKIDNNVKEAAYHAWLGYYNSIREIGRDKTTLVELANKFAQSIGLQRPPPLFRKT 826
+D MAKID ++KEAAYHAWLGYYNS+RE GRDKTTL ELAN+F SIGL++PP LFR+T
Sbjct: 733 VDQSMAKIDTSIKEAAYHAWLGYYNSVRETGRDKTTLAELANRFCHSIGLEKPPALFRRT 792
Query: 827 ALKMGLKDIPGIRLRK 842
A+KMGLK I GI +RK
Sbjct: 793 AVKMGLKGISGIPIRK 808
>gi|297837065|ref|XP_002886414.1| hypothetical protein ARALYDRAFT_315081 [Arabidopsis lyrata subsp.
lyrata]
gi|297332255|gb|EFH62673.1| hypothetical protein ARALYDRAFT_315081 [Arabidopsis lyrata subsp.
lyrata]
Length = 793
Score = 872 bits (2252), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 468/861 (54%), Positives = 601/861 (69%), Gaps = 87/861 (10%)
Query: 1 MSSSVLLQRSKPLTNILWFNRVFARPMGGGPRTFPGGLNKWQWKRMHEKKAKEKEKRLLE 60
M S +L +RS T LW +++F+R MGGGPRTFPGGLNKWQWKRMHEKKA+EKE +LL+
Sbjct: 1 MYSLILRERSGSFTGSLW-SQIFSRNMGGGPRTFPGGLNKWQWKRMHEKKAREKENKLLD 59
Query: 61 QEKQLYQARVRSQIRTKLFDKADPDSET----NQHKPMSPDEHVKALADRFMKEGAEDLW 116
QEKQLY+AR+R++IR K++ D +T H PMSP EH+K LADRFMK GAEDLW
Sbjct: 60 QEKQLYEARIRTEIRAKMWGNPDSGEKTAKSKQSHGPMSPKEHIKTLADRFMKAGAEDLW 119
Query: 117 NEDDGPVKSE-------QRPRSGAEANQRPRLAGAPIDLRGLISDKRNSVNNSGNLNSGS 169
NE+DGPVK +R + +N + + ID+R L+S S+ NS +
Sbjct: 120 NENDGPVKESDDGSGLTRRDNGRSGSNSIVSSSNSSIDVRKLVSGTCYSMGNSRVFDRSR 179
Query: 170 NVKTRNYSVLSESKFSDRSKSASLIFMPNLECNDGETVIPSRNVMDFVRRAYFSGTDKRN 229
R +S +S +F R++S+ C++G+ DF
Sbjct: 180 ----RGFSSMSRGRFK-RNESS---------CDEGD---------DF------------- 203
Query: 230 FCRNDGSSTRDKAGFDTGNKAKPFARNLGNNREN-GDSKNMSEFMKKKCFVGKRRFKRNE 288
D DT PF+ +E S+++ ++ K G+R+F++N+
Sbjct: 204 ----------DAKKLDT---LSPFSLKFAGTKEKVKSSRSVDGVIRNKGLFGRRKFRKND 250
Query: 289 SSSSDDDSDIDSEDVDEKVEGWRDVKKMGSSASLGKYDMKITKRVPLKSLEDEHDFEEQV 348
SS+ D + E + K+ GW D++K GSSASLG +D+K+TKRV ++E +
Sbjct: 251 SSTE---EDSEEEGEEGKMIGWMDLRKTGSSASLGNHDIKLTKRVNRNVTDEELYPPLDI 307
Query: 349 ELIRKEISKNKLNGNGEKKEKREEEPILSQKRFDECGISPLTIKALTAAGYIQMTRVQEA 408
+R+++SK K N K+ + + S+KRFDE ISPLT+KAL+A+G + MTRVQ+A
Sbjct: 308 NTVREDLSKRKSVDNVIKENREPHDSFYSRKRFDESSISPLTLKALSASGIVNMTRVQDA 367
Query: 409 TLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSS-STTQLVPPIYVLILCPTREL 467
TLS CL+GKDA+VKAKTGTGKS+AFLLPAIE VLKA ++ ++ VPPI+ LILCPTREL
Sbjct: 368 TLSECLDGKDALVKAKTGTGKSMAFLLPAIETVLKAMNNGNSVHKVPPIFALILCPTREL 427
Query: 468 ASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSG 527
ASQI+AE +ALLK HDGIGV TL+GGTRFK+DQ+RLES+PCQIL+ATPGRLLDHIENKSG
Sbjct: 428 ASQISAEGMALLKYHDGIGVQTLIGGTRFKLDQQRLESEPCQILIATPGRLLDHIENKSG 487
Query: 528 LSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQSLLFSATMPKE------LVL 581
L+ RLM LK+ ++DEAD LLDLGFR+DVE I+DCLPR+RQSLLFSAT+PKE LVL
Sbjct: 488 LTSRLMALKLFIVDEADLLLDLGFRRDVEKIIDCLPRQRQSLLFSATIPKEVRRVSQLVL 547
Query: 582 KREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTG 641
KR+H+YIDT+GLG VET K+KQSC+VAPH+ HF ++ HLLKEHI T DYK+IVFCSTG
Sbjct: 548 KRDHSYIDTIGLGCVETHDKVKQSCIVAPHDSHFHLVPHLLKEHISNTLDYKIIVFCSTG 607
Query: 642 MVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVT 701
MVTSL+Y LLREMK+NVRE+++RKPQL+R R+S+EF+ SKRLILVTSDVSARGM+YPDVT
Sbjct: 608 MVTSLMYTLLREMKLNVREIHARKPQLHRTRVSDEFKESKRLILVTSDVSARGMNYPDVT 667
Query: 702 SVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLAPWEEYFLDDLKDLPLDKLQLPHLNP 761
V+QVGIP E+ PWE YFLD+LKDLPL+ + +P L+
Sbjct: 668 LVIQVGIPKPEEKAKEEKD---------------CPWERYFLDELKDLPLEPIPVPDLDS 712
Query: 762 EIQLQMDNHMAKIDNNVKEAAYHAWLGYYNSIREIGRDKTTLVELANKFAQSIGLQRPPP 821
+ LQ+D MAKID ++KEAAYHAWLGYYNS+RE GRDKTTL ELAN+F SIGL++PP
Sbjct: 713 RVNLQVDQSMAKIDTSIKEAAYHAWLGYYNSVRETGRDKTTLAELANRFCHSIGLEKPPA 772
Query: 822 LFRKTALKMGLKDIPGIRLRK 842
LFR+TA+KMGLK I GI +RK
Sbjct: 773 LFRRTAVKMGLKGISGIPIRK 793
>gi|413939551|gb|AFW74102.1| putative DEAD-box ATP-dependent RNA helicase family protein [Zea
mays]
Length = 818
Score = 855 bits (2210), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 453/842 (53%), Positives = 588/842 (69%), Gaps = 50/842 (5%)
Query: 27 MGGGPRTFPGGLNKWQWKRMHEKKAKEKEKRLLEQEKQLYQARVRSQIRTKLFDKADPDS 86
MGGGPRTFPGGL+KWQ+KRMHEK A++K++ LL EKQLY AR+RS+IR A ++
Sbjct: 1 MGGGPRTFPGGLSKWQYKRMHEKLARQKQRGLLRHEKQLYLARLRSEIRASRLPGAAAEA 60
Query: 87 ETNQHKPMSPDEHVKALADRFMKEGAEDLWNEDDGPVKSEQRP----RSGAEANQRPRLA 142
P S H++ALADRF + GAEDLWNEDDGP++ +RP SG Q+ +
Sbjct: 61 PPGGEGPTSSRAHIRALADRFRRPGAEDLWNEDDGPLRRVKRPPTGIASGVRHQQQQLDS 120
Query: 143 GAPIDLRGLIS-DKRNSVNNSGNLNSGSNVKTRNYSVLSESKFSDRSKSASLI--FMPNL 199
G P RG S + S++ L+ G + + F+ R + +++ + P
Sbjct: 121 GKP---RGGPSWEDLTSLDQPRPLDRGKGP--------TSAAFNPRREYLTVVAPWCPRW 169
Query: 200 ECNDGETVIPSRN--VMDFVRRAYFSGTDKRNFCRN----DGSSTRDK--AGFDT----G 247
+ V P ++ VM + D R + DG+ +D A F+
Sbjct: 170 DPRPLGFVAPKKSYPVMTRCSVSCQPCVDLRPLVASGLTEDGNGRKDTPLAQFNQERFYS 229
Query: 248 NKAKPFARNLGNNRENGDSKNMSEFMKKKCFVGKRRFKRNESSSSDDDSDIDSEDVDEKV 307
A+ F R + + D K S K RF + +SS++DS+ID E D
Sbjct: 230 VAARRFGRKWRPDSSDQDDKGTSAPKKNL------RFGKKFGASSEEDSEID-ESGDTGA 282
Query: 308 EGWRDVKKMGSSASLGKYDMKITKRVPLKSLEDE-HDFEEQVELIRKEISKNKLNGNGEK 366
+++ SSA+L D+K +RV LKS E+E +D +++ +R+EI ++ G +
Sbjct: 283 -----IRRRWSSAALRNCDVKKERRV-LKSYEEESNDLAGRIQELREEIRNREVLGTERR 336
Query: 367 KEKREEEPILSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTG 426
+ + E +L+ KRFD+CG+S LT+KALT AGY+Q T VQEA L CLEGKD +VKAKTG
Sbjct: 337 RYESRGESLLTSKRFDQCGVSALTVKALTDAGYVQTTVVQEAALPICLEGKDVLVKAKTG 396
Query: 427 TGKSIAFLLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIG 486
TGKS AFLLPAIE+VL A S+T Q V PI+ L+LCPTRELA Q+ AEA LLK H+GIG
Sbjct: 397 TGKSAAFLLPAIESVLNAMKSNTNQRVSPIFALVLCPTRELAIQLTAEANVLLKYHEGIG 456
Query: 487 VLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHL 546
V +L+GGTRFK+DQRRLESDPCQILVATPGRLLDHIENKS SVRLM LK+LVLDEADHL
Sbjct: 457 VQSLIGGTRFKLDQRRLESDPCQILVATPGRLLDHIENKSSFSVRLMRLKLLVLDEADHL 516
Query: 547 LDLGFRKDVENIVDCLPRRRQSLLFSATMPKE------LVLKREHTYIDTVGLGSVETPV 600
LDLGFRKD+E IVD LPR+RQ+LLFSAT+PKE LVLKR+H ++DTVGLG+VETP
Sbjct: 517 LDLGFRKDIEKIVDTLPRQRQTLLFSATIPKEVRRVSQLVLKRDHVFVDTVGLGAVETPT 576
Query: 601 KIKQSCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVRE 660
K++QSCLV PHELHF +HHLL+EHI DYKVIVFC+T MVT +Y++LR++K+NVRE
Sbjct: 577 KVQQSCLVVPHELHFHTVHHLLREHIDREVDYKVIVFCTTAMVTEFMYIMLRDLKLNVRE 636
Query: 661 MYSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLG 720
++SRKPQLYR RISEEFR S R++LVTSDVS RG++YPDVT V+QVG+PPDRE YIHRLG
Sbjct: 637 IHSRKPQLYRTRISEEFRGSNRIVLVTSDVSTRGVNYPDVTLVIQVGVPPDREHYIHRLG 696
Query: 721 RTGREGKEGEGVLLLAPWEEYFLDDLKDLPLDKLQLPHLNPEIQLQMDNHMAKIDNNVKE 780
RT REGK G+G+LLLAPWE+YFLD++ DLP+DK P ++ E++ ++D+ + +D ++KE
Sbjct: 697 RTAREGKSGKGILLLAPWEQYFLDEIGDLPIDKYPAPDIDQEMKQKVDDSIEMVDMSIKE 756
Query: 781 AAYHAWLGYYNSIREIGRDKTTLVELANKFAQSIGLQRPPPLFRKTALKMGLKDIPGIRL 840
AAYHAWLGYYNSI +IGRDK +V+LAN+F SIGL++PP ++RKTALKMGLKD+PGIR+
Sbjct: 757 AAYHAWLGYYNSIADIGRDKRMVVDLANRFGASIGLEKPPAIYRKTALKMGLKDVPGIRI 816
Query: 841 RK 842
RK
Sbjct: 817 RK 818
>gi|242067048|ref|XP_002454813.1| hypothetical protein SORBIDRAFT_04g037930 [Sorghum bicolor]
gi|241934644|gb|EES07789.1| hypothetical protein SORBIDRAFT_04g037930 [Sorghum bicolor]
Length = 823
Score = 848 bits (2190), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 453/851 (53%), Positives = 579/851 (68%), Gaps = 63/851 (7%)
Query: 27 MGGGPRTFPGGLNKWQWKRMHEKKAKEKEKRLLEQEKQLYQARVRSQIRTKLFDKADPDS 86
MGGGPRTFPGGL+KWQ++RMHEK A++K++ LL EKQLY AR+RS+IR A ++
Sbjct: 1 MGGGPRTFPGGLSKWQYRRMHEKLARQKQRGLLRHEKQLYLARLRSEIRASRLPGAAAEA 60
Query: 87 ETNQHKPMSPDEHVKALADRFMKEGAEDLWNEDDGPVKSEQRPRSGAEANQRPRLAGAPI 146
P S H++ALADRF + GAEDLWNEDDGP++ +RP +G + R
Sbjct: 61 PPQGEGPTSSRAHIRALADRFRRPGAEDLWNEDDGPLRRAKRPPTGIASGVR-------- 112
Query: 147 DLRGLISDKRNSVNNSGNLNSGSNVKTRNYSVLSESKFS----DRSKSASL-IFMPNLEC 201
+ +SG G + + L + + DR K +L F P E
Sbjct: 113 --------HHHQQLDSGKPRGGPSWEDWEDLALGQPRPRKEPLDRGKGPTLAAFNPRREY 164
Query: 202 NDGETVI----PSRNVMDFVRRAYFSGTDKRNFCRNDGSSTRDKAGFDTGNKAKPFARNL 257
TV+ P N F G KR++ S + D +
Sbjct: 165 ---LTVVAPWCPRWNPGPL----RFVGP-KRSYSVMTPCSVSWQPCVDLRPLVARGLTEV 216
Query: 258 GNNRENGDSKNMSEFMKKKCF-VGKRRFKRNESSSSDDDSDID---------------SE 301
GN R + F +++ + V RRF R S DD D S
Sbjct: 217 GNGRREAP---LPLFNQERLYSVAARRFGRKWRPDSSDDDDEGTSAPKRNLRFGKFGASS 273
Query: 302 DVDEKVEGWRD---VKKMGSSASLGKYDMKITKRVPLKSLEDE-HDFEEQVELIRKEISK 357
+ D +++ D +++ SSA+L DMK +RV LK E+E +D ++ +R+EI
Sbjct: 274 EEDSEIDESGDTGAIRRRWSSAALRNCDMKKERRV-LKYYEEESNDLAGRIRELREEIRN 332
Query: 358 NKLNGNGEKKEKREEEPILSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGK 417
++ G ++ + E +L+ KRFDECG+SPLT+KALT AGY+ T VQEA L CLEGK
Sbjct: 333 REVLGTERRRYESRGESLLTSKRFDECGVSPLTVKALTDAGYVHTTVVQEAALPICLEGK 392
Query: 418 DAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIA 477
D +VKAKTGTGKS AFLLPAIE+VL A ++T Q V PI+VL+LCPTRELA Q+AAEA
Sbjct: 393 DVLVKAKTGTGKSAAFLLPAIESVLNAMKTNTNQRVSPIFVLVLCPTRELAIQLAAEANV 452
Query: 478 LLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKM 537
LLK H+GIGV TL+GGTRFK+DQRRLESDPCQILVATPGRLLDHIENKS SVRLM LK+
Sbjct: 453 LLKYHEGIGVQTLIGGTRFKLDQRRLESDPCQILVATPGRLLDHIENKSSFSVRLMRLKL 512
Query: 538 LVLDEADHLLDLGFRKDVENIVDCLPRRRQSLLFSATMPKE------LVLKREHTYIDTV 591
LVLDEADHLLDLGFRKD+E IVD LPR+RQ+LLFSAT+PKE LVLKR+H ++DTV
Sbjct: 513 LVLDEADHLLDLGFRKDIEKIVDSLPRQRQTLLFSATIPKEVRRVSQLVLKRDHVFVDTV 572
Query: 592 GLGSVETPVKIKQSCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLL 651
GLG+VETP K++QSCLV PHELHF ++HHLL+EHI DYKVIVFC+T MVT +Y++L
Sbjct: 573 GLGAVETPTKVQQSCLVVPHELHFHMVHHLLQEHIDREVDYKVIVFCTTAMVTEFMYIML 632
Query: 652 REMKMNVREMYSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPD 711
R++K+NVRE++SRKPQL+R RISEEFR S RLILVTSDVS RG++YPDVT V+QVG+PPD
Sbjct: 633 RDLKLNVREIHSRKPQLFRTRISEEFRGSNRLILVTSDVSTRGVNYPDVTLVIQVGVPPD 692
Query: 712 REQYIHRLGRTGREGKEGEGVLLLAPWEEYFLDDLKDLPLDKLQLPHLNPEIQLQMDNHM 771
RE YIHRLGRTGREGK G+G+LLLAPWE+YFL+++ DLP++K P + E++ ++D+ +
Sbjct: 693 REHYIHRLGRTGREGKSGKGILLLAPWEQYFLNEIGDLPIEKCPAPDIGQEMKQKVDDSI 752
Query: 772 AKIDNNVKEAAYHAWLGYYNSIREIGRDKTTLVELANKFAQSIGLQRPPPLFRKTALKMG 831
+D ++KEAAYHAWLGYYNSI +IGRDKT L +LAN+F SIGL++PP ++RKTALKMG
Sbjct: 753 KIVDMSIKEAAYHAWLGYYNSIADIGRDKTMLADLANRFGASIGLEKPPAIYRKTALKMG 812
Query: 832 LKDIPGIRLRK 842
LKD+PGIR+RK
Sbjct: 813 LKDVPGIRIRK 823
>gi|357137715|ref|XP_003570445.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 48-like
[Brachypodium distachyon]
Length = 843
Score = 838 bits (2166), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 448/860 (52%), Positives = 582/860 (67%), Gaps = 61/860 (7%)
Query: 27 MGGGPRTFPGGLNKWQWKRMHEKKAKEKEKRLLEQEKQLYQARVRSQIRTKLF------D 80
MGGGPRTFPGGL+KWQ+KRMHEK A++K++ LL EKQLY AR+RS+IR
Sbjct: 1 MGGGPRTFPGGLSKWQYKRMHEKLARQKQRGLLRHEKQLYLARLRSEIRASHLPGAADAA 60
Query: 81 KADPDSETNQHKPMSPDEHVKALADRFMKEGAEDLWNEDDGPVKSEQRPRSGAEANQRPR 140
A PD P S H++ALADRF++ GAEDLWNEDDGP++ + A P
Sbjct: 61 AASPDLGGG---PTSSRAHIRALADRFLRPGAEDLWNEDDGPLRRAKTLPRTQPARSLP- 116
Query: 141 LAGAPI-DLRGLISDKRNSVNNSGNLNSGSNVKTRNYSVL-------SESKFS--DRSKS 190
+GA I D + + S K+ S SG+ + V SE + + + +
Sbjct: 117 -SGARIVDWKQMDSGKKPSQGGSGDWKDWEELHVEQPRVRRGTGVGGSEPRLAAFNTRRE 175
Query: 191 ASLIFMPNLECNDGETVIPSRNVMDFVRRAYFSGTDKRNFCRNDGSSTRDKAGFDTGNKA 250
+ + + G R F F G + + S R+ +
Sbjct: 176 YGTVAPWWWQWSSGSGTPSQRKEASF----GFFGLKRCYSVMHPCSPHRE-----SSPTL 226
Query: 251 KPFARNLGNNRENGDSKNMSEFMKKKCF-VGKRRFK---RNESSSSDDDS---------- 296
P + NG +++ F +++ + V RRF R +SS DDD
Sbjct: 227 MPLGASQSTGARNGKETSLAMFNQERLYSVAARRFGQKWRPDSSDEDDDGISTAKRDLRF 286
Query: 297 -------DIDSEDVDEKVEGWRDVKKMGSSASLGKYDMKITKRVPLKSLEDE-HDFEEQV 348
+ +SED DE E +++ S+A+L DMK +R LKS E+E +D ++
Sbjct: 287 GKFGAPREEESED-DEPREA-STIRRKWSTAALRNCDMKKDRRA-LKSYEEESNDLTGRI 343
Query: 349 ELIRKEISKNKLNGNGEKKEKREEEPILSQKRFDECGISPLTIKALTAAGYIQMTRVQEA 408
+ +R+EI ++ G ++ + E + + KRFDECGISPLT+KALT AGY+Q T VQEA
Sbjct: 344 QELREEIRNREVLGAERRRYESRGESLFTSKRFDECGISPLTVKALTDAGYVQTTVVQEA 403
Query: 409 TLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELA 468
L CLEGKD +VKAKTGTGKS AFLLPAIE+VL A S T V PI+ L+LCPTRELA
Sbjct: 404 ALPICLEGKDVLVKAKTGTGKSAAFLLPAIESVLNAMKSHTNHRVSPIFALVLCPTRELA 463
Query: 469 SQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGL 528
Q+ AEA LLKNH G+GV +L+GGTRFK+DQRRLESDPCQILVATPGRLLDHIEN+S
Sbjct: 464 VQVTAEANVLLKNHQGVGVQSLIGGTRFKLDQRRLESDPCQILVATPGRLLDHIENRSSF 523
Query: 529 SVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQSLLFSATMPKE------LVLK 582
SVRLMGLK+LVLDEADHLLDLGFRKD+E I D LPR+RQ+LLFSAT+PKE LVL
Sbjct: 524 SVRLMGLKLLVLDEADHLLDLGFRKDIEKIADSLPRQRQTLLFSATVPKEVRRVSQLVLN 583
Query: 583 REHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGM 642
R+H ++DTVGLG+VETP+K++Q LV PHELHF ++H LL+EHI +YKVIVFCST M
Sbjct: 584 RDHVFVDTVGLGAVETPIKVQQQYLVVPHELHFHMVHRLLREHIDQEVNYKVIVFCSTAM 643
Query: 643 VTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTS 702
VT +Y++LR++K+NVRE++SRKPQLYR RISEEFR S RLILVTSDVSARG++YPDVT
Sbjct: 644 VTEFMYIMLRDLKLNVREIHSRKPQLYRTRISEEFRDSSRLILVTSDVSARGLNYPDVTL 703
Query: 703 VVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLAPWEEYFLDDLKDLPLDKLQLPHLNPE 762
V+QVG+PP RE YIHRLGRTGREGK G+G+LL+APWEEYFL+++ DLP++K Q+PH++ E
Sbjct: 704 VIQVGVPPGREHYIHRLGRTGREGKSGKGILLIAPWEEYFLNEITDLPIEKAQVPHIDQE 763
Query: 763 IQLQMDNHMAKIDNNVKEAAYHAWLGYYNSIREIGRDKTTLVELANKFAQSIGLQRPPPL 822
+ ++D+ + +D ++KEAAYHAWLGYYNSI ++GRDK+ L +LA++F SIG+++PP L
Sbjct: 764 TKQKVDDSIKIVDMSIKEAAYHAWLGYYNSIADVGRDKSMLADLASRFCVSIGVEKPPAL 823
Query: 823 FRKTALKMGLKDIPGIRLRK 842
+RKTALKMGLKD+PGIR+RK
Sbjct: 824 YRKTALKMGLKDVPGIRIRK 843
>gi|115449921|ref|NP_001048584.1| Os02g0826100 [Oryza sativa Japonica Group]
gi|75324058|sp|Q6K7R9.1|RH48_ORYSJ RecName: Full=DEAD-box ATP-dependent RNA helicase 48
gi|48716436|dbj|BAD23043.1| putative ATP-dependent RNA helicase [Oryza sativa Japonica Group]
gi|113538115|dbj|BAF10498.1| Os02g0826100 [Oryza sativa Japonica Group]
gi|218197440|gb|EEC79867.1| hypothetical protein OsI_21363 [Oryza sativa Indica Group]
gi|222623956|gb|EEE58088.1| hypothetical protein OsJ_08955 [Oryza sativa Japonica Group]
Length = 811
Score = 825 bits (2132), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 447/843 (53%), Positives = 568/843 (67%), Gaps = 59/843 (6%)
Query: 27 MGGGPRTFPGGLNKWQWKRMHEKKAKEKEKRLLEQEKQLYQARVRSQIRTKLFDKADPDS 86
MGGGPRTFPGGL+KWQ KRMHEK A+ KE+ LL EKQLY AR+RS+IR A
Sbjct: 1 MGGGPRTFPGGLSKWQHKRMHEKLARHKERGLLRHEKQLYLARLRSEIRASRLPAAGASP 60
Query: 87 ETNQHKPMSPDEHVKALADRFMKEGAEDLWNEDDGPVKSEQRPRS-------GAEANQRP 139
+ P S H++ALADRF+ GAEDLWNEDDGP+ RPR G R
Sbjct: 61 PDDGDGPTSSRAHIRALADRFLLPGAEDLWNEDDGPIHRADRPRPPRRIVSVGGNGGDRR 120
Query: 140 RLAGAPIDL-RGLISDKRNSVNNSGNLNSGSNVKTRNYSVLSESKFSDRSKSASLIF--- 195
+L +L RG + + N + + + + S + R+K AS F
Sbjct: 121 KLDSTKQELPRGGKEPRLAAFNPRRDFQTAAPWWWQWSSSSA---IPSRTKEASFCFFGP 177
Query: 196 ------MPNLECN---DGETVIPSRNVMDFVRRAYFSGTDKRNFCRNDGSSTRDKAGFDT 246
MP + + G +++P + R S + + +G A
Sbjct: 178 KRSYSVMPLFQAHQESSGTSMVP------LIARGLASA--RIAPSQLNGERFYSFAAGRF 229
Query: 247 GNKAKPFARNLGNNRENGDSKNMSEFMKKKCFVGKRRFKRNESSSSDDDSDIDSEDVDEK 306
G K +P + + + + K+M RF R +SS+++S D +
Sbjct: 230 GRKLRPDSSDEDDEDISTAKKDM-------------RFARF-GASSEEESGYD------E 269
Query: 307 VEGWRDVKKMGSSASLGKYDMKITKRVPLKSLEDEH-DFEEQVELIRKEISKNKLNGNGE 365
+E ++K SSA+L DMK +R LKS E+E+ D +R+EI ++ G
Sbjct: 270 LEARSAIRKKWSSAALRNCDMKKERRA-LKSYEEENNDLAGSFRELREEIKNREVLGAER 328
Query: 366 KKEKREEEPILSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKT 425
++ + E + + KRF+ECGISPLT+KALT AGY+Q T VQE L CLEGKD +VKAKT
Sbjct: 329 RRYESRGESLFTNKRFEECGISPLTVKALTDAGYVQTTVVQETALPMCLEGKDVLVKAKT 388
Query: 426 GTGKSIAFLLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGI 485
GTGKS AFLLPAIE+VL A S T V PI+ LILCPTRELA Q+ AEA LLK H GI
Sbjct: 389 GTGKSAAFLLPAIESVLNAMKSHTNHRVSPIFSLILCPTRELAIQLTAEANVLLKYHQGI 448
Query: 486 GVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADH 545
GV +L+GGTRFK+DQRRLESDPCQILVATPGRLLDHIENKS SVRLMGLK+LVLDEADH
Sbjct: 449 GVQSLIGGTRFKLDQRRLESDPCQILVATPGRLLDHIENKSSFSVRLMGLKLLVLDEADH 508
Query: 546 LLDLGFRKDVENIVDCLPRRRQSLLFSATMPKE------LVLKREHTYIDTVGLGSVETP 599
LLDLGFR D+E IVD LPR+RQ+LLFSAT+PKE LVLKR+H ++DTVGLG+VETP
Sbjct: 509 LLDLGFRTDIEKIVDSLPRQRQTLLFSATIPKEVRRVSQLVLKRDHVFVDTVGLGAVETP 568
Query: 600 VKIKQSCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVR 659
K++Q LV PHELHF +++ LL+EHI DYKVIVFC+T MVT +Y++LR++K+NVR
Sbjct: 569 TKVEQLYLVMPHELHFHMVYRLLREHIDQEVDYKVIVFCTTAMVTEFMYIMLRDLKLNVR 628
Query: 660 EMYSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRL 719
E++SRKPQLYR RISEEFR S RLILVTSDVS RG++YP VT V+QVG+P DRE YIHRL
Sbjct: 629 EIHSRKPQLYRTRISEEFRDSSRLILVTSDVSTRGVNYPGVTLVIQVGVPSDREHYIHRL 688
Query: 720 GRTGREGKEGEGVLLLAPWEEYFLDDLKDLPLDKLQLPHLNPEIQLQMDNHMAKIDNNVK 779
GRTGREGK G+G+LLLAPWEEYFL+++ DLP+ K Q P+++ E++ ++D + +D ++K
Sbjct: 689 GRTGREGKSGKGILLLAPWEEYFLNEIHDLPVQKSQTPNIDEEMKRKVDGSIKIVDMSIK 748
Query: 780 EAAYHAWLGYYNSIREIGRDKTTLVELANKFAQSIGLQRPPPLFRKTALKMGLKDIPGIR 839
EAAYHAWLGYYNSI ++GRDKT LV+LAN+F +SIGL++PP L+RKTALKMGLKD+PGIR
Sbjct: 749 EAAYHAWLGYYNSIGDVGRDKTMLVDLANRFCKSIGLEKPPALYRKTALKMGLKDVPGIR 808
Query: 840 LRK 842
+RK
Sbjct: 809 IRK 811
>gi|359474023|ref|XP_002276972.2| PREDICTED: probable DEAD-box ATP-dependent RNA helicase 48-like
[Vitis vinifera]
gi|297742558|emb|CBI34707.3| unnamed protein product [Vitis vinifera]
Length = 754
Score = 822 bits (2124), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 427/601 (71%), Positives = 510/601 (84%), Gaps = 19/601 (3%)
Query: 258 GNNRENGDSKNMSEFMKKKCFVG--KRRFKRNESSSSDDDS------DIDSEDVDEKVE- 308
G + G+++ +S +K + + +RRF+RNESSSSDD S + VD+ VE
Sbjct: 157 GRSLGPGNARIVSRALKPRHYSVQVRRRFRRNESSSSDDGSDVSSGDEFSGRLVDDDVEL 216
Query: 309 -GWRDVKKMGSSASLGKYDMKITKRVPLKSLEDEHDFEEQVELIRKEISKNKLNGNGEKK 367
G R+V+KM SSA+LGKYD+KI +RV KS+++ DF EQ+ELIR E+S+ L E++
Sbjct: 217 RGRRNVQKMMSSAALGKYDVKIKRRVMPKSIDEGDDFSEQIELIRHELSRKNL---AEEE 273
Query: 368 EKREEEPILSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGT 427
EK +EE ILSQKRFDECG+SPLT+KAL++AGY+QMTRVQEATL CLEGKDA+VKAKTGT
Sbjct: 274 EKGDEESILSQKRFDECGVSPLTVKALSSAGYVQMTRVQEATLDVCLEGKDALVKAKTGT 333
Query: 428 GKSIAFLLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGV 487
GKS AFLLPAIEAVLKATSS+ Q VPPI VLILCPTRE+ASQIAAEA +LK HDGIGV
Sbjct: 334 GKSAAFLLPAIEAVLKATSSNRIQRVPPILVLILCPTREIASQIAAEANVMLKYHDGIGV 393
Query: 488 LTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLL 547
TL+GGTRFK DQ+RLESDPCQI+VATPGRLLDHIENK SVRLMGLKMLVLDEADHLL
Sbjct: 394 QTLIGGTRFKFDQKRLESDPCQIIVATPGRLLDHIENKGSFSVRLMGLKMLVLDEADHLL 453
Query: 548 DLGFRKDVENIVDCLPRRRQSLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVK 601
DLGFRKD+E IVDCLPR+RQSLLFSAT+PKE LVLK+EH ++DTVGLG+ ET K
Sbjct: 454 DLGFRKDMEKIVDCLPRQRQSLLFSATVPKEVRRISQLVLKKEHAFVDTVGLGNAETHAK 513
Query: 602 IKQSCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREM 661
++QS LVAPH+LHFQI++HLLK+HIL PDYKVIVFC+T MVTSL++LLL+EMK+NVRE+
Sbjct: 514 VRQSYLVAPHKLHFQIVYHLLKDHILQVPDYKVIVFCTTAMVTSLVFLLLQEMKVNVREI 573
Query: 662 YSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGR 721
+SRKPQ+YR RISEEFR SKRL+L+TSDVSARG++YPDVT V+Q+GIP DREQYIHRLGR
Sbjct: 574 HSRKPQIYRTRISEEFRESKRLVLITSDVSARGINYPDVTLVIQMGIPSDREQYIHRLGR 633
Query: 722 TGREGKEGEGVLLLAPWEEYFLDDLKDLPLDKLQLPHLNPEIQLQMDNHMAKIDNNVKEA 781
TGREGKEGEG+LL+APWEEYFLD++KDLP++K LP L+P+++L++ M KID +VKEA
Sbjct: 634 TGREGKEGEGILLVAPWEEYFLDEIKDLPIEKFPLPLLDPDLKLKVGASMDKIDTSVKEA 693
Query: 782 AYHAWLGYYNSIREIGRDKTTLVELANKFAQSIGLQRPPPLFRKTALKMGLKDIPGIRLR 841
AYHAWLGYYNSIRE GRDKTTLVELAN+F +SIGLQ+PP LFRKTALKMGLK IPGIR+R
Sbjct: 694 AYHAWLGYYNSIRETGRDKTTLVELANQFCESIGLQKPPLLFRKTALKMGLKGIPGIRIR 753
Query: 842 K 842
+
Sbjct: 754 R 754
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 106/192 (55%), Positives = 130/192 (67%), Gaps = 15/192 (7%)
Query: 1 MSSSVLLQRSKPLTNILWFNRVFARPMGGGPRTFPGGLNKWQWKRMHEKKAKEKEKRLLE 60
M SS+L + S + +L FARPMGGGPRTFPGG+NKWQWKR+HEKKA+EKEKRLL+
Sbjct: 1 MYSSILRRHSSSSSKLLC-TFFFARPMGGGPRTFPGGINKWQWKRLHEKKAREKEKRLLD 59
Query: 61 QEKQLYQARVRSQIRTKLFDKA----DPDSETNQHKPMSPDEHVKALADRFMKEGAEDLW 116
EKQLY+AR+RSQIR KL K PDS+ H PMSP +H+KALADRFMKEGAEDLW
Sbjct: 60 HEKQLYEARIRSQIRAKLAGKPVSEFSPDSDHPNHNPMSPQDHIKALADRFMKEGAEDLW 119
Query: 117 NEDDGPVKS----EQRPRSGAEANQRPRLAGAPIDLRGLISDKRNSVNNSGNLNSGSNVK 172
N+DDGPVKS +RP +G P P+DLR L S R+ + + S + +K
Sbjct: 120 NDDDGPVKSPPLLPRRPSNGLSRQIEP-----PVDLRKLTSHGRSLGPGNARIVSRA-LK 173
Query: 173 TRNYSVLSESKF 184
R+YSV +F
Sbjct: 174 PRHYSVQVRRRF 185
>gi|356527618|ref|XP_003532405.1| PREDICTED: putative DEAD-box ATP-dependent RNA helicase 33-like
[Glycine max]
Length = 707
Score = 819 bits (2115), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 403/538 (74%), Positives = 467/538 (86%), Gaps = 16/538 (2%)
Query: 314 KKMGSSASLGKYDMKITKRVPLKSLEDEHDFEEQVELIRKEISKNKLNGNGEKKEKREEE 373
KK GSSASLG+YD+K +RV K+ +VE IR +++K KL+ E++ + +++
Sbjct: 177 KKRGSSASLGEYDVKRERRVVPKT-------SPEVEFIRYQLNKRKLSQIEEQQSQEQQQ 229
Query: 374 P---ILSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKS 430
ILS RFDECGISPLT+KAL++AGY+QMTR+QEA+L CLEG DA+VKAKTGTGKS
Sbjct: 230 SNESILSNTRFDECGISPLTVKALSSAGYVQMTRIQEASLPICLEGMDALVKAKTGTGKS 289
Query: 431 IAFLLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTL 490
+AFLLPAIE VLKA SS+T+Q VPPIYVLILCPTRELASQIAA A LLK H+ IGV TL
Sbjct: 290 VAFLLPAIETVLKAMSSNTSQRVPPIYVLILCPTRELASQIAAVAKVLLKYHETIGVQTL 349
Query: 491 VGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLG 550
VGG RFKVDQ+RLESDPCQILVATPGRLLDHIENKSG+S+RLMGL+MLVLDEADHLLDLG
Sbjct: 350 VGGIRFKVDQKRLESDPCQILVATPGRLLDHIENKSGISLRLMGLRMLVLDEADHLLDLG 409
Query: 551 FRKDVENIVDCLPRRRQSLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQ 604
FRKDVE IVDCLPR+RQSLLFSATMPKE LVLKREH Y+DTVG+G VETPVK+KQ
Sbjct: 410 FRKDVEKIVDCLPRQRQSLLFSATMPKEVRRVSQLVLKREHKYVDTVGMGCVETPVKVKQ 469
Query: 605 SCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSR 664
S L+APHE HFQ++H +LKEHIL TPDYKVIVFC TGMVTSL+Y LLREMKMNVRE++SR
Sbjct: 470 SYLIAPHESHFQLVHQILKEHILQTPDYKVIVFCVTGMVTSLMYNLLREMKMNVREIHSR 529
Query: 665 KPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGR 724
KPQLYR RIS+EFR SK+LILV+SDVS+RGM+YPDVT V+QVGIP DREQYIHRLGRTGR
Sbjct: 530 KPQLYRTRISDEFRESKQLILVSSDVSSRGMNYPDVTLVIQVGIPSDREQYIHRLGRTGR 589
Query: 725 EGKEGEGVLLLAPWEEYFLDDLKDLPLDKLQLPHLNPEIQLQMDNHMAKIDNNVKEAAYH 784
E KEGEGVLL+APWEEYFLD++KDLPL LP +NP +L+++N MAKIDN++KEAAYH
Sbjct: 590 EDKEGEGVLLIAPWEEYFLDEIKDLPLQNFPLPDINPHTKLKIENSMAKIDNDIKEAAYH 649
Query: 785 AWLGYYNSIREIGRDKTTLVELANKFAQSIGLQRPPPLFRKTALKMGLKDIPGIRLRK 842
AWLGYYNSIREIGR+KTT+ ELAN+F++SIGLQRPP LFRKTA+KMGLKDIPGIR+RK
Sbjct: 650 AWLGYYNSIREIGREKTTMAELANRFSESIGLQRPPALFRKTAIKMGLKDIPGIRIRK 707
Score = 154 bits (390), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 81/155 (52%), Positives = 100/155 (64%), Gaps = 22/155 (14%)
Query: 19 FNRVFARPMGGGPRTFPGGLNKWQWKRMHEKKAKEKEKRLLEQEKQLYQARVRSQIRTKL 78
+N V R MGGGPRTFPGG+NKW+WKRMHEK A++K+ RL+EQEKQLYQAR+RS IR+ L
Sbjct: 16 WNWVSLRNMGGGPRTFPGGVNKWKWKRMHEKLARDKQNRLIEQEKQLYQARIRSHIRSTL 75
Query: 79 FDKADPDSET---NQHKPMSPDEHVKALADRFMKEGAEDLWNEDDGPVKSEQRPRSGAEA 135
PD ++ H+P+SP++HVKALADRF+KEGAEDLWN DGP+
Sbjct: 76 ----SPDHQSAAAATHRPLSPNDHVKALADRFVKEGAEDLWNNHDGPLT----------P 121
Query: 136 NQRPRLAGAPIDLRGLISDKRNSVNNSGNLNSGSN 170
N P L P RG SV GN G++
Sbjct: 122 NPTPNLNFGPKHTRGY-----RSVPEVGNSRVGAH 151
>gi|326531756|dbj|BAJ97882.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 843
Score = 816 bits (2107), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 437/857 (50%), Positives = 572/857 (66%), Gaps = 55/857 (6%)
Query: 27 MGGGPRTFPGGLNKWQWKRMHEKKAKEKEKRLLEQEKQLYQARVRSQIRTKLFDKADPDS 86
MGGGPRTF GGL+KWQ KRMHEK A+ KE+ LL EKQLY AR+RS+IR A P S
Sbjct: 1 MGGGPRTFAGGLSKWQHKRMHEKLARGKERGLLRHEKQLYLARLRSEIRASHLPGA-PAS 59
Query: 87 ETNQHKPMSPDEHVKALADRFMKEGAEDLWNEDDGPVKSEQRPRSGAEANQRPRLAGAPI 146
+ P S H++ALADRF++ GAEDLWN+DDGP++ + P A + +
Sbjct: 60 PADHAGPTSSRAHIRALADRFLRPGAEDLWNDDDGPLRRARLPSQQKNAARTLPSGARMV 119
Query: 147 DLRGLISDKRNSVNNSGN-------LNSGSNVKTR---NYSVLSESKFSDRSKSASLIFM 196
D + + S +R G L+SG R N + FS R + +
Sbjct: 120 DWKRVESGERPKPPRGGGDWKDWEELDSGEPRAGRGAGNEQPRLPAAFSQR-RGYGTVAP 178
Query: 197 PNLECNDGETVIPSRNVMDFVRRAYFSGTDKRNFCRNDGSSTRDKAGFDTGNKAKPFA-R 255
+ + G R F +F KR + S R ++G P R
Sbjct: 179 WWWQWSPGSGTPSQRKEASF---GFFG--LKRCYSAMPPLSPRQ----ESGAALMPLGVR 229
Query: 256 NLGNNRENGDSKNMSE---FMKKKCFVGK--RRF-KRNESSSSDDDSDI----------- 298
L + G +K + +++ + G RRF ++ SSD+D ++
Sbjct: 230 QL--SEAGGGTKGTPPALFYAQERLYSGAAPRRFGQKWRPDSSDEDEEVMPPAKRDLRLA 287
Query: 299 ------DSEDVDEKVEGWRDVKKMGSSASLGKYDMKITKRVPLKSLEDEHD-FEEQVELI 351
+ E D++V +++ SSA+L DMK +R PLKS E+E D +++ +
Sbjct: 288 KFVASREDESEDDEVGETSAIRRKWSSAALRNCDMKRDRR-PLKSYEEESDDITGRIQEL 346
Query: 352 RKEISKNKLNGNGEKKEKREEEPILSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLS 411
R+EI ++ G ++ + E + + KRFDECGISPLT+KALT AGYI T VQEA L
Sbjct: 347 REEIRNREVLGAERRRYESRGESVFTNKRFDECGISPLTVKALTDAGYIHTTVVQEAALP 406
Query: 412 ACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQI 471
CLEGKD +VKAKTGTGKS+AFLLPAIE+VL A S T V PI+ L+LCPTRELA Q+
Sbjct: 407 ICLEGKDVLVKAKTGTGKSVAFLLPAIESVLNAMKSHTNHRVSPIFALVLCPTRELAVQV 466
Query: 472 AAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVR 531
AEA L+K H G+GV +L+GGTRFK+DQRRLESDPCQILVATPGRLLDHIEN+S SVR
Sbjct: 467 TAEANVLVKYHHGVGVQSLIGGTRFKLDQRRLESDPCQILVATPGRLLDHIENRSSFSVR 526
Query: 532 LMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQSLLFSATMPKE------LVLKREH 585
LMGLK+LVLDEADHLLDLGFRKD+E I D LPR+RQ+LLFSAT+PKE +VL ++H
Sbjct: 527 LMGLKLLVLDEADHLLDLGFRKDIEKIADSLPRQRQTLLFSATIPKEVRRVSQMVLNKDH 586
Query: 586 TYIDTVGLGSVETPVKIKQSCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTS 645
++DTVGLG+VETP K++Q LV PHELHF ++H LL+EHI DYKVIVFC+T MVT
Sbjct: 587 VFVDTVGLGAVETPTKVQQQYLVVPHELHFHMVHRLLREHIDQEVDYKVIVFCTTAMVTE 646
Query: 646 LLYLLLREMKMNVREMYSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQ 705
+Y++LR++K+NVRE++SRKPQLYR RISEEFR S RLILVTSDVS RG++YPDVT V+Q
Sbjct: 647 FMYIMLRDLKLNVREIHSRKPQLYRTRISEEFRDSNRLILVTSDVSTRGVNYPDVTLVIQ 706
Query: 706 VGIPPDREQYIHRLGRTGREGKEGEGVLLLAPWEEYFLDDLKDLPLDKLQLPHLNPEIQL 765
G+PP RE YIHRLGRTGREGK G+G+LL+APWEEYFL+++ DLP++K +P ++ E++
Sbjct: 707 AGVPPGREHYIHRLGRTGREGKSGKGILLIAPWEEYFLNEIHDLPIEKAPVPQIDQEMKQ 766
Query: 766 QMDNHMAKIDNNVKEAAYHAWLGYYNSIREIGRDKTTLVELANKFAQSIGLQRPPPLFRK 825
++D+ + +D ++KEAAYHAWLGYYNSI ++ RDK L +LA++F SIG+++PP L+RK
Sbjct: 767 KVDDSIKIVDMSIKEAAYHAWLGYYNSIADVSRDKVMLADLASRFGVSIGMEKPPTLYRK 826
Query: 826 TALKMGLKDIPGIRLRK 842
TALKMGLK +PGIR+RK
Sbjct: 827 TALKMGLKGVPGIRIRK 843
>gi|326527675|dbj|BAK08112.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 843
Score = 815 bits (2104), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 436/857 (50%), Positives = 571/857 (66%), Gaps = 55/857 (6%)
Query: 27 MGGGPRTFPGGLNKWQWKRMHEKKAKEKEKRLLEQEKQLYQARVRSQIRTKLFDKADPDS 86
MGGGPRTF GGL+KWQ KRMHEK A+ KE+ LL EKQLY AR+RS+IR A P S
Sbjct: 1 MGGGPRTFAGGLSKWQHKRMHEKLARGKERGLLRHEKQLYLARLRSEIRASHLPGA-PAS 59
Query: 87 ETNQHKPMSPDEHVKALADRFMKEGAEDLWNEDDGPVKSEQRPRSGAEANQRPRLAGAPI 146
+ P S H++ALADRF++ GAEDLWN+DDGP++ + P A + +
Sbjct: 60 PADHAGPTSSRAHIRALADRFLRPGAEDLWNDDDGPLRRARLPSQQKNAARTLPSGARMV 119
Query: 147 DLRGLISDKRNSVNNSGN-------LNSGSNVKTR---NYSVLSESKFSDRSKSASLIFM 196
D + + S +R G L+SG R N + FS R + +
Sbjct: 120 DWKRVESGERPKPPRGGGDWKDWEELDSGEPRAGRGAGNEQPRLPAAFSQR-RGYGTVAP 178
Query: 197 PNLECNDGETVIPSRNVMDFVRRAYFSGTDKRNFCRNDGSSTRDKAGFDTGNKAKPFA-R 255
+ + G R F +F KR + S R ++G P R
Sbjct: 179 WWWQWSPGSGTPSQRKEASF---GFFG--LKRCYSAMPPLSPRQ----ESGAALMPLGVR 229
Query: 256 NLGNNRENGDSKNMSE---FMKKKCFVGK--RRF-KRNESSSSDDDSDI----------- 298
L + G +K + +++ + G RRF ++ SSD+D ++
Sbjct: 230 QL--SEAGGGTKGTPPALFYAQERLYSGAAPRRFGQKWRPDSSDEDEEVMPPAKRDLRLA 287
Query: 299 ------DSEDVDEKVEGWRDVKKMGSSASLGKYDMKITKRVPLKSLEDEHD-FEEQVELI 351
+ E D++V +++ SSA+L DMK +R PLKS E+E D +++ +
Sbjct: 288 KFVASREDESEDDEVGETSAIRRKWSSAALRNCDMKRDRR-PLKSYEEESDDITGRIQEL 346
Query: 352 RKEISKNKLNGNGEKKEKREEEPILSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLS 411
R+EI ++ G ++ + E + + KRFDECGISPLT+KALT AGYI T VQEA L
Sbjct: 347 REEIRNREVLGAERRRYESRGESVFTNKRFDECGISPLTVKALTDAGYIHTTVVQEAALP 406
Query: 412 ACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQI 471
CLEGKD +VKAKTGTGKS+AFLLPAIE+VL A S T V PI+ L+LCPTREL Q+
Sbjct: 407 ICLEGKDVLVKAKTGTGKSVAFLLPAIESVLNAMKSHTNHRVSPIFALVLCPTRELVVQV 466
Query: 472 AAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVR 531
AEA L+K H G+GV +L+GGTRFK+DQRRLESDPCQILVATPGRLLDHIEN+S SVR
Sbjct: 467 TAEANVLVKYHHGVGVQSLIGGTRFKLDQRRLESDPCQILVATPGRLLDHIENRSSFSVR 526
Query: 532 LMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQSLLFSATMPKE------LVLKREH 585
LMGLK+LVLDEADHLLDLGFRKD+E I D LPR+RQ+LLFSAT+PKE +VL ++H
Sbjct: 527 LMGLKLLVLDEADHLLDLGFRKDIEKIADSLPRQRQTLLFSATIPKEVRRVSQMVLNKDH 586
Query: 586 TYIDTVGLGSVETPVKIKQSCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTS 645
++DTVGLG+VETP K++Q LV PHELHF ++H LL+EHI DYKVIVFC+T MVT
Sbjct: 587 VFVDTVGLGAVETPTKVQQQYLVVPHELHFHMVHRLLREHIDQEVDYKVIVFCTTAMVTE 646
Query: 646 LLYLLLREMKMNVREMYSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQ 705
+Y++LR++K+NVRE++SRKPQLYR RISEEFR S RLILVTSDVS RG++YPDVT V+Q
Sbjct: 647 FMYIMLRDLKLNVREIHSRKPQLYRTRISEEFRDSNRLILVTSDVSTRGVNYPDVTLVIQ 706
Query: 706 VGIPPDREQYIHRLGRTGREGKEGEGVLLLAPWEEYFLDDLKDLPLDKLQLPHLNPEIQL 765
G+PP RE YIHRLGRTGREGK G+G+LL+APWEEYFL+++ DLP++K +P ++ E++
Sbjct: 707 AGVPPGREHYIHRLGRTGREGKSGKGILLIAPWEEYFLNEIHDLPIEKAPVPQIDQEMKQ 766
Query: 766 QMDNHMAKIDNNVKEAAYHAWLGYYNSIREIGRDKTTLVELANKFAQSIGLQRPPPLFRK 825
++D+ + +D ++KEAAYHAWLGYYNSI ++ RDK L +LA++F SIG+++PP L+RK
Sbjct: 767 KVDDSIKIVDMSIKEAAYHAWLGYYNSIADVSRDKVMLADLASRFGVSIGMEKPPTLYRK 826
Query: 826 TALKMGLKDIPGIRLRK 842
TALKMGLK +PGIR+RK
Sbjct: 827 TALKMGLKGVPGIRIRK 843
>gi|9759355|dbj|BAB10010.1| RNA helicase-like protein [Arabidopsis thaliana]
Length = 827
Score = 586 bits (1510), Expect = e-164, Method: Compositional matrix adjust.
Identities = 283/499 (56%), Positives = 373/499 (74%), Gaps = 7/499 (1%)
Query: 350 LIRKEISKNKLNGNGEKKEK-REEEPILSQKRFDECGISPLTIKALTAAGYIQMTRVQEA 408
LI+K S + + E + + LS+ RFD+ +SPL++KA+ AG+ MT VQEA
Sbjct: 329 LIKKAASAKAVQTDKPTGEHVKTSDSYLSKTRFDQFPLSPLSLKAIKDAGFETMTVVQEA 388
Query: 409 TLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELA 468
TL L+GKD + KAKTGTGK++AFLLPAIEAV+K+ +S PPI VL++CPTRELA
Sbjct: 389 TLPIILQGKDVLAKAKTGTGKTVAFLLPAIEAVIKSPPASRDSRQPPIIVLVVCPTRELA 448
Query: 469 SQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGL 528
SQ AAEA LLK H IGV ++GGT+ +QRR++++PCQILVATPGRL DHIEN SG
Sbjct: 449 SQAAAEANTLLKYHPSIGVQVVIGGTKLPTEQRRMQTNPCQILVATPGRLKDHIENTSGF 508
Query: 529 SVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQSLLFSATMPKEL------VLK 582
+ RLMG+K+LVLDEADHLLD+GFR+D+E I+ +P++RQ+ LFSAT+P+E+ LK
Sbjct: 509 ATRLMGVKVLVLDEADHLLDMGFRRDIERIIAAVPKQRQTFLFSATVPEEVRQICHVALK 568
Query: 583 REHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGM 642
R+H +I+ V GS ET K+ Q ++A + HF +LH LLKEHI DYKVI+FC+T M
Sbjct: 569 RDHEFINCVQEGSGETHQKVTQMYMIASLDRHFSLLHVLLKEHIADNVDYKVIIFCTTAM 628
Query: 643 VTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTS 702
VT L+ LL ++ +NVRE++SRKPQ YR R+S+EFR SK +ILVTSDVSARG+DYPDV+
Sbjct: 629 VTRLVADLLSQLSLNVREIHSRKPQSYRTRVSDEFRKSKAIILVTSDVSARGVDYPDVSL 688
Query: 703 VVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLAPWEEYFLDDLKDLPLDKLQLPHLNPE 762
VVQ+G+P DREQYIHRLGRTGR+GKEGEGVLLLAPWEEYF+ +KDLP+ K LP ++PE
Sbjct: 689 VVQMGLPSDREQYIHRLGRTGRKGKEGEGVLLLAPWEEYFMSSVKDLPITKSPLPPIDPE 748
Query: 763 IQLQMDNHMAKIDNNVKEAAYHAWLGYYNSIREIGRDKTTLVELANKFAQSIGLQRPPPL 822
++ +++++ KEAAY AWLGYY S + I RD T LVELAN+F++S+GL PP +
Sbjct: 749 AVKRVQKGLSQVEMKNKEAAYQAWLGYYKSQKMIARDTTRLVELANEFSRSMGLDSPPAI 808
Query: 823 FRKTALKMGLKDIPGIRLR 841
+ KMGLK++PG+R +
Sbjct: 809 PKNVLGKMGLKNVPGLRTK 827
>gi|30682500|ref|NP_196478.2| DEAD-box ATP-dependent RNA helicase 26 [Arabidopsis thaliana]
gi|109893654|sp|Q9FNM7.2|RH26_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 26
gi|332003946|gb|AED91329.1| DEAD-box ATP-dependent RNA helicase 26 [Arabidopsis thaliana]
Length = 850
Score = 585 bits (1509), Expect = e-164, Method: Compositional matrix adjust.
Identities = 283/499 (56%), Positives = 373/499 (74%), Gaps = 7/499 (1%)
Query: 350 LIRKEISKNKLNGNGEKKEK-REEEPILSQKRFDECGISPLTIKALTAAGYIQMTRVQEA 408
LI+K S + + E + + LS+ RFD+ +SPL++KA+ AG+ MT VQEA
Sbjct: 352 LIKKAASAKAVQTDKPTGEHVKTSDSYLSKTRFDQFPLSPLSLKAIKDAGFETMTVVQEA 411
Query: 409 TLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELA 468
TL L+GKD + KAKTGTGK++AFLLPAIEAV+K+ +S PPI VL++CPTRELA
Sbjct: 412 TLPIILQGKDVLAKAKTGTGKTVAFLLPAIEAVIKSPPASRDSRQPPIIVLVVCPTRELA 471
Query: 469 SQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGL 528
SQ AAEA LLK H IGV ++GGT+ +QRR++++PCQILVATPGRL DHIEN SG
Sbjct: 472 SQAAAEANTLLKYHPSIGVQVVIGGTKLPTEQRRMQTNPCQILVATPGRLKDHIENTSGF 531
Query: 529 SVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQSLLFSATMPKEL------VLK 582
+ RLMG+K+LVLDEADHLLD+GFR+D+E I+ +P++RQ+ LFSAT+P+E+ LK
Sbjct: 532 ATRLMGVKVLVLDEADHLLDMGFRRDIERIIAAVPKQRQTFLFSATVPEEVRQICHVALK 591
Query: 583 REHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGM 642
R+H +I+ V GS ET K+ Q ++A + HF +LH LLKEHI DYKVI+FC+T M
Sbjct: 592 RDHEFINCVQEGSGETHQKVTQMYMIASLDRHFSLLHVLLKEHIADNVDYKVIIFCTTAM 651
Query: 643 VTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTS 702
VT L+ LL ++ +NVRE++SRKPQ YR R+S+EFR SK +ILVTSDVSARG+DYPDV+
Sbjct: 652 VTRLVADLLSQLSLNVREIHSRKPQSYRTRVSDEFRKSKAIILVTSDVSARGVDYPDVSL 711
Query: 703 VVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLAPWEEYFLDDLKDLPLDKLQLPHLNPE 762
VVQ+G+P DREQYIHRLGRTGR+GKEGEGVLLLAPWEEYF+ +KDLP+ K LP ++PE
Sbjct: 712 VVQMGLPSDREQYIHRLGRTGRKGKEGEGVLLLAPWEEYFMSSVKDLPITKSPLPPIDPE 771
Query: 763 IQLQMDNHMAKIDNNVKEAAYHAWLGYYNSIREIGRDKTTLVELANKFAQSIGLQRPPPL 822
++ +++++ KEAAY AWLGYY S + I RD T LVELAN+F++S+GL PP +
Sbjct: 772 AVKRVQKGLSQVEMKNKEAAYQAWLGYYKSQKMIARDTTRLVELANEFSRSMGLDSPPAI 831
Query: 823 FRKTALKMGLKDIPGIRLR 841
+ KMGLK++PG+R +
Sbjct: 832 PKNVLGKMGLKNVPGLRTK 850
>gi|297745425|emb|CBI40505.3| unnamed protein product [Vitis vinifera]
Length = 732
Score = 585 bits (1508), Expect = e-164, Method: Compositional matrix adjust.
Identities = 275/470 (58%), Positives = 373/470 (79%), Gaps = 6/470 (1%)
Query: 376 LSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLL 435
LS+ RFD+C ISPL++KA+ AGY +MT VQEATL L+GKD + KAKTGTGK++AFLL
Sbjct: 261 LSETRFDQCPISPLSLKAIKDAGYEKMTVVQEATLPVILKGKDVLAKAKTGTGKTVAFLL 320
Query: 436 PAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTR 495
P+IE ++K+ S Q PPI VL++CPTRELASQ AAEA LLK H +GV ++GGTR
Sbjct: 321 PSIEILVKSPPISRDQKRPPIVVLVICPTRELASQAAAEANTLLKYHPSLGVQVVIGGTR 380
Query: 496 FKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDV 555
++Q+R++++PCQILVATPGRL DHIEN +G + RLMG+K+LVLDEADHLLD+GFRKD+
Sbjct: 381 LALEQKRMQANPCQILVATPGRLKDHIENTAGFATRLMGVKVLVLDEADHLLDMGFRKDI 440
Query: 556 ENIVDCLPRRRQSLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSCLVA 609
E I+ +P++RQ+LLFSAT+P+E + LKR+H +I+TV GS ET +++Q+ ++A
Sbjct: 441 EKIIAAVPKQRQTLLFSATVPEEVRQICHIALKRDHEFINTVQEGSEETHSQVRQTHIIA 500
Query: 610 PHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLY 669
P + HF +L+ LLK+HI DYKV+VFC+T MVT L+ LL E+ +NVRE++SRKPQ Y
Sbjct: 501 PLDKHFLLLYALLKDHIADDVDYKVLVFCTTAMVTRLVADLLGELNLNVREIHSRKPQGY 560
Query: 670 RDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEG 729
R R+S+EFR SK LILVTSDVSARG+DYPDVT V+QVG+P D+EQYIHRLGRTGR+GKEG
Sbjct: 561 RTRVSDEFRKSKGLILVTSDVSARGVDYPDVTLVIQVGLPSDKEQYIHRLGRTGRKGKEG 620
Query: 730 EGVLLLAPWEEYFLDDLKDLPLDKLQLPHLNPEIQLQMDNHMAKIDNNVKEAAYHAWLGY 789
+G+LLLAPWEE+FL KDLP+ K + P ++P+ + +++ +++++ KEAAY AWLGY
Sbjct: 621 QGILLLAPWEEFFLSTAKDLPITKAEAPLVDPDTRKKVERALSQVEMKSKEAAYQAWLGY 680
Query: 790 YNSIREIGRDKTTLVELANKFAQSIGLQRPPPLFRKTALKMGLKDIPGIR 839
YNS +++GRDK LVELAN+F++++GL PP + + KMGL+++PG+R
Sbjct: 681 YNSNKKVGRDKVRLVELANEFSRTMGLDNPPAIPKLILGKMGLRNVPGLR 730
>gi|147820620|emb|CAN67649.1| hypothetical protein VITISV_005080 [Vitis vinifera]
Length = 863
Score = 585 bits (1508), Expect = e-164, Method: Compositional matrix adjust.
Identities = 275/470 (58%), Positives = 373/470 (79%), Gaps = 6/470 (1%)
Query: 376 LSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLL 435
LS+ RFD+C ISPL++KA+ AGY +MT VQEATL L+GKD + KAKTGTGK++AFLL
Sbjct: 392 LSETRFDQCPISPLSLKAIKDAGYEKMTVVQEATLPVILKGKDVLAKAKTGTGKTVAFLL 451
Query: 436 PAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTR 495
P+IE ++K+ S Q PPI VL++CPTRELASQ AAEA LLK H +GV ++GGTR
Sbjct: 452 PSIEILVKSPPISRDQKRPPIVVLVICPTRELASQAAAEANTLLKYHPSLGVQVVIGGTR 511
Query: 496 FKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDV 555
++Q+R++++PCQILVATPGRL DHIEN +G + RLMG+K+LVLDEADHLLD+GFRKD+
Sbjct: 512 LALEQKRMQANPCQILVATPGRLKDHIENTAGFATRLMGVKVLVLDEADHLLDMGFRKDI 571
Query: 556 ENIVDCLPRRRQSLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSCLVA 609
E I+ +P++RQ+LLFSAT+P+E + LKR+H +I+TV GS ET +++Q+ ++A
Sbjct: 572 EKIIAAVPKQRQTLLFSATVPEEVRQICHIALKRDHEFINTVQEGSEETHSQVRQTHIIA 631
Query: 610 PHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLY 669
P + HF +L+ LLK+HI DYKV+VFC+T MVT L+ LL E+ +NVRE++SRKPQ Y
Sbjct: 632 PLDKHFLLLYALLKDHIADDVDYKVLVFCTTAMVTRLVADLLGELNLNVREIHSRKPQGY 691
Query: 670 RDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEG 729
R R+S+EFR SK LILVTSDVSARG+DYPDVT V+QVG+P D+EQYIHRLGRTGR+GKEG
Sbjct: 692 RTRVSDEFRKSKGLILVTSDVSARGVDYPDVTLVIQVGLPSDKEQYIHRLGRTGRKGKEG 751
Query: 730 EGVLLLAPWEEYFLDDLKDLPLDKLQLPHLNPEIQLQMDNHMAKIDNNVKEAAYHAWLGY 789
+G+LLLAPWEE+FL KDLP+ K + P ++P+ + +++ +++++ KEAAY AWLGY
Sbjct: 752 QGILLLAPWEEFFLSTAKDLPITKAEAPLVDPDTRKKVERALSQVEMKSKEAAYQAWLGY 811
Query: 790 YNSIREIGRDKTTLVELANKFAQSIGLQRPPPLFRKTALKMGLKDIPGIR 839
YNS +++GRDK LVELAN+F++++GL PP + + KMGL+++PG+R
Sbjct: 812 YNSNKKVGRDKVRLVELANEFSRTMGLDNPPAIPKLILGKMGLRNVPGLR 861
>gi|356560282|ref|XP_003548422.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 31-like [Glycine
max]
Length = 806
Score = 585 bits (1507), Expect = e-164, Method: Compositional matrix adjust.
Identities = 277/471 (58%), Positives = 369/471 (78%), Gaps = 7/471 (1%)
Query: 376 LSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLL 435
LS+ RFD+C ISPL++K + AGY +MT VQEATL L+GKD + KAKTGTGK++AFLL
Sbjct: 334 LSETRFDQCSISPLSLKGVKDAGYEKMTVVQEATLPVILKGKDVLAKAKTGTGKTVAFLL 393
Query: 436 PAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTR 495
P+IE V K+ S PPI VL++CPTRELASQ AAEA LLK H IGV ++GGTR
Sbjct: 394 PSIEVVAKSPPSDRDHRRPPISVLVICPTRELASQAAAEATKLLKYHPTIGVQVVIGGTR 453
Query: 496 FKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDV 555
++Q+R++++PCQILVATPGRL DH EN +G + RLMG+K+LVLDEADHLLD+GFRKD+
Sbjct: 454 LALEQKRMQANPCQILVATPGRLRDHTENTAGFATRLMGVKVLVLDEADHLLDMGFRKDI 513
Query: 556 ENIVDCLPRRRQSLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSCLVA 609
E I+ +P++RQ+L+FSAT+P+E + L+R+H +I+TV G+ ET +++Q+ LVA
Sbjct: 514 EKIIAAVPKQRQTLMFSATVPEEVRQVCHIALRRDHEFINTVQEGTEETHSQVRQTHLVA 573
Query: 610 PHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLY 669
P + HF +L+ LLK+HI DYKV+VFC+T MVT L+ LL E+ +NVRE++SRKPQ Y
Sbjct: 574 PLDKHFSLLYVLLKDHIADDVDYKVLVFCTTAMVTRLVAELLGELNLNVREIHSRKPQSY 633
Query: 670 RDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEG 729
R R+SEEFR SK LILVTSDVSARG+DYPDVT V+QVG+P DREQYIHRLGRTGR GKEG
Sbjct: 634 RTRVSEEFRRSKGLILVTSDVSARGVDYPDVTLVIQVGLPADREQYIHRLGRTGRRGKEG 693
Query: 730 EGVLLLAPWEEYFLDDLKDLPLDKLQ-LPHLNPEIQLQMDNHMAKIDNNVKEAAYHAWLG 788
+G+LLLAPWE++FL +KDLP++K LP ++P+ + +++ ++ ++ KEAAY AWLG
Sbjct: 694 QGILLLAPWEDFFLSTVKDLPIEKAPVLPSVDPDTKKKVEKALSHVEMKNKEAAYQAWLG 753
Query: 789 YYNSIREIGRDKTTLVELANKFAQSIGLQRPPPLFRKTALKMGLKDIPGIR 839
YYNS +++GRDK LVELAN+F++S+GL PP + + KMGL++IPG+R
Sbjct: 754 YYNSNKKVGRDKYRLVELANEFSRSMGLDNPPAIPKLVLGKMGLRNIPGLR 804
>gi|359489723|ref|XP_002277120.2| PREDICTED: DEAD-box ATP-dependent RNA helicase 31-like [Vitis
vinifera]
Length = 751
Score = 585 bits (1507), Expect = e-164, Method: Compositional matrix adjust.
Identities = 275/470 (58%), Positives = 373/470 (79%), Gaps = 6/470 (1%)
Query: 376 LSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLL 435
LS+ RFD+C ISPL++KA+ AGY +MT VQEATL L+GKD + KAKTGTGK++AFLL
Sbjct: 280 LSETRFDQCPISPLSLKAIKDAGYEKMTVVQEATLPVILKGKDVLAKAKTGTGKTVAFLL 339
Query: 436 PAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTR 495
P+IE ++K+ S Q PPI VL++CPTRELASQ AAEA LLK H +GV ++GGTR
Sbjct: 340 PSIEILVKSPPISRDQKRPPIVVLVICPTRELASQAAAEANTLLKYHPSLGVQVVIGGTR 399
Query: 496 FKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDV 555
++Q+R++++PCQILVATPGRL DHIEN +G + RLMG+K+LVLDEADHLLD+GFRKD+
Sbjct: 400 LALEQKRMQANPCQILVATPGRLKDHIENTAGFATRLMGVKVLVLDEADHLLDMGFRKDI 459
Query: 556 ENIVDCLPRRRQSLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSCLVA 609
E I+ +P++RQ+LLFSAT+P+E + LKR+H +I+TV GS ET +++Q+ ++A
Sbjct: 460 EKIIAAVPKQRQTLLFSATVPEEVRQICHIALKRDHEFINTVQEGSEETHSQVRQTHIIA 519
Query: 610 PHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLY 669
P + HF +L+ LLK+HI DYKV+VFC+T MVT L+ LL E+ +NVRE++SRKPQ Y
Sbjct: 520 PLDKHFLLLYALLKDHIADDVDYKVLVFCTTAMVTRLVADLLGELNLNVREIHSRKPQGY 579
Query: 670 RDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEG 729
R R+S+EFR SK LILVTSDVSARG+DYPDVT V+QVG+P D+EQYIHRLGRTGR+GKEG
Sbjct: 580 RTRVSDEFRKSKGLILVTSDVSARGVDYPDVTLVIQVGLPSDKEQYIHRLGRTGRKGKEG 639
Query: 730 EGVLLLAPWEEYFLDDLKDLPLDKLQLPHLNPEIQLQMDNHMAKIDNNVKEAAYHAWLGY 789
+G+LLLAPWEE+FL KDLP+ K + P ++P+ + +++ +++++ KEAAY AWLGY
Sbjct: 640 QGILLLAPWEEFFLSTAKDLPITKAEAPLVDPDTRKKVERALSQVEMKSKEAAYQAWLGY 699
Query: 790 YNSIREIGRDKTTLVELANKFAQSIGLQRPPPLFRKTALKMGLKDIPGIR 839
YNS +++GRDK LVELAN+F++++GL PP + + KMGL+++PG+R
Sbjct: 700 YNSNKKVGRDKVRLVELANEFSRTMGLDNPPAIPKLILGKMGLRNVPGLR 749
>gi|255564739|ref|XP_002523364.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
gi|223537452|gb|EEF39080.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
Length = 751
Score = 582 bits (1500), Expect = e-163, Method: Compositional matrix adjust.
Identities = 309/647 (47%), Positives = 432/647 (66%), Gaps = 53/647 (8%)
Query: 229 NFCRNDGSSTRDKAGFDTGNKAKPFARNLGNNRENGDSKNMSEFMKKKCFVGK-RRFKRN 287
+ RN R + GF + + R ++ SE ++ K F RN
Sbjct: 120 DMTRNKSKRERGREGFSSSKR-----------RRERETDEFSELNNRRGIKDKVDSFSRN 168
Query: 288 ESSSSDDDSD-IDSEDVDEKVEGWRDVKKMGSSASLGKYDMKITKRVPLKSLEDEHDFEE 346
+S D I S++ E+ R KK+G+ A LG + KRV + +D D E+
Sbjct: 169 SRASKPFDRKFIGSDNEKERFNSRR--KKIGN-ADLG---FRREKRVSVDENDDYFDKED 222
Query: 347 Q--------VELIRKE----------------ISKNKLNGNGEKKEKREE----EPILSQ 378
+ +L+R+E + KN + G +K++ + LS
Sbjct: 223 ERKDLIGRITDLVREEETDDANDEGCHDDEGILRKNVSSSLGFEKDRPNSPGTSDSYLSD 282
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
RFD+C +SPL++K + AGY +MT VQEATL L+GKD + KA+TGTGK++AFLLPAI
Sbjct: 283 SRFDQCPVSPLSLKGIKDAGYEKMTVVQEATLPVILKGKDVLAKARTGTGKTVAFLLPAI 342
Query: 439 EAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
E V+K+ + Q PPI V+++CPTRELASQ AAEA LLK H +GV ++GGTR +
Sbjct: 343 EVVVKSPPTGRDQKRPPILVVVICPTRELASQAAAEANTLLKYHPSVGVQVVIGGTRLAL 402
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
+Q++++++PCQILVATPGRL DHIEN +G + RLMG+K+L+LDEADHLLD+GFRKD+E I
Sbjct: 403 EQKKMQANPCQILVATPGRLQDHIENTAGFATRLMGVKVLILDEADHLLDMGFRKDIERI 462
Query: 559 VDCLPRRRQSLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHE 612
+ +P++RQ+LLFSAT+P+E + L+R+H +I+TV G+ ET +++Q LVAP +
Sbjct: 463 IAAVPKQRQTLLFSATVPEEVRQICHIALRRDHEFINTVPEGTDETHTQVRQMHLVAPLD 522
Query: 613 LHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDR 672
HF +L+ LLK+HI DYKV++FC+T MVT ++ LL E+K+NVRE++SRKPQ YR R
Sbjct: 523 KHFPLLYVLLKDHIADNIDYKVLLFCTTAMVTRMVANLLGELKLNVREIHSRKPQSYRTR 582
Query: 673 ISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGV 732
+S+EFR SK LILVTSDVSARG+DYPDVT V+QVG+P DREQYIHRLGRTGR+GKEG G+
Sbjct: 583 VSDEFRKSKGLILVTSDVSARGVDYPDVTLVIQVGLPADREQYIHRLGRTGRKGKEGVGI 642
Query: 733 LLLAPWEEYFLDDLKDLPLDKLQLPHLNPEIQLQMDNHMAKIDNNVKEAAYHAWLGYYNS 792
LLLAPWEE FL +KDLP+ K +P ++P+ + +++ ++ ++ KEAAY AWLGYYNS
Sbjct: 643 LLLAPWEESFLSTIKDLPISKAPVPSVDPDTKKKVERSLSHVEMKNKEAAYQAWLGYYNS 702
Query: 793 IREIGRDKTTLVELANKFAQSIGLQRPPPLFRKTALKMGLKDIPGIR 839
+ +GRDK LVELAN F++S+GL PP + + KMGL++IPG+R
Sbjct: 703 SKLVGRDKYRLVELANDFSRSMGLDNPPAIPKLVLGKMGLRNIPGLR 749
>gi|449475575|ref|XP_004154493.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase
31-like [Cucumis sativus]
Length = 842
Score = 581 bits (1498), Expect = e-163, Method: Compositional matrix adjust.
Identities = 280/506 (55%), Positives = 380/506 (75%), Gaps = 17/506 (3%)
Query: 350 LIRKEISKNKLNGNGEKKEKRE--------EEPILSQKRFDECGISPLTIKALTAAGYIQ 401
L RK S N L +GEK + + + LS+ RFD+C ISPL++K + AGY +
Sbjct: 284 LFRK--STNTLFPSGEKVSEMDRPRTSPGGSDSYLSETRFDQCSISPLSLKGIKDAGYEK 341
Query: 402 MTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLVPPIYVLIL 461
MT VQEATL L+GKD + KAKTGTGK++AFLLP+IE V+K+ + Q PPI VL++
Sbjct: 342 MTVVQEATLPLILKGKDVLAKAKTGTGKTVAFLLPSIEVVVKSPPTGD-QKRPPILVLVI 400
Query: 462 CPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDH 521
CPTRELA+Q A EA LLK H IGV ++GGTR ++Q+R++++PCQILVATPGRL DH
Sbjct: 401 CPTRELATQAANEANTLLKYHSTIGVQVVIGGTRLALEQKRMQANPCQILVATPGRLKDH 460
Query: 522 IENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQSLLFSATMPKE--- 578
IEN +G + RLMG+K+LVLDEADHLLD+GFRKD+E I+ +P++RQ+LLFSAT+P E
Sbjct: 461 IENTAGFATRLMGVKVLVLDEADHLLDMGFRKDIERIIAAVPKQRQTLLFSATVPDEVRQ 520
Query: 579 ---LVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILHHLLKEHILGTPDYKVI 635
+ L+R+H +++T+ GS +T +++Q +VAP E HF +L+ +LKEHI DYKV+
Sbjct: 521 ISHIALRRDHEFVNTIEEGSEDTHAQVRQMQIVAPLEKHFSLLYAILKEHIANDVDYKVL 580
Query: 636 VFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEFRASKRLILVTSDVSARGM 695
VFC+T MVT ++ LL E+ +N+RE++SRK Q YR ++S+EFR SK LILVTSDVSARG+
Sbjct: 581 VFCTTAMVTRMVADLLGELNLNIREIHSRKAQSYRTKVSDEFRKSKGLILVTSDVSARGV 640
Query: 696 DYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLAPWEEYFLDDLKDLPLDKLQ 755
DYPDVT V+QVG+P DREQYIHRLGRTGR+GKEG+G+LLL PWEE+FL +KDLP+ K
Sbjct: 641 DYPDVTLVIQVGLPADREQYIHRLGRTGRKGKEGQGILLLTPWEEFFLSTVKDLPITKAP 700
Query: 756 LPHLNPEIQLQMDNHMAKIDNNVKEAAYHAWLGYYNSIREIGRDKTTLVELANKFAQSIG 815
+P ++PE + ++D + ++ KEAAY AWLGYYNS + +G+DK LVELAN+F++S+G
Sbjct: 701 MPLIDPETKKKVDRALVHVEMKNKEAAYQAWLGYYNSNKTVGKDKYRLVELANEFSRSMG 760
Query: 816 LQRPPPLFRKTALKMGLKDIPGIRLR 841
L PP + + KMGLK+IPG+R++
Sbjct: 761 LDNPPAISKLVLGKMGLKNIPGLRVK 786
>gi|449443947|ref|XP_004139737.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase
26-like [Cucumis sativus]
Length = 841
Score = 580 bits (1496), Expect = e-163, Method: Compositional matrix adjust.
Identities = 280/506 (55%), Positives = 380/506 (75%), Gaps = 17/506 (3%)
Query: 350 LIRKEISKNKLNGNGEKKEKRE--------EEPILSQKRFDECGISPLTIKALTAAGYIQ 401
L RK S N L +GEK + + + LS+ RFD+C ISPL++K + AGY +
Sbjct: 283 LFRK--STNTLFPSGEKVSEMDRPRTSPGGSDSYLSETRFDQCSISPLSLKGIKDAGYEK 340
Query: 402 MTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLVPPIYVLIL 461
MT VQEATL L+GKD + KAKTGTGK++AFLLP+IE V+K+ + Q PPI VL++
Sbjct: 341 MTVVQEATLPLILKGKDVLAKAKTGTGKTVAFLLPSIEVVVKSPPTGD-QKRPPILVLVI 399
Query: 462 CPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDH 521
CPTRELA+Q A EA LLK H IGV ++GGTR ++Q+R++++PCQILVATPGRL DH
Sbjct: 400 CPTRELATQAANEANTLLKYHSTIGVQVVIGGTRLALEQKRMQANPCQILVATPGRLKDH 459
Query: 522 IENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQSLLFSATMPKE--- 578
IEN +G + RLMG+K+LVLDEADHLLD+GFRKD+E I+ +P++RQ+LLFSAT+P E
Sbjct: 460 IENTAGFATRLMGVKVLVLDEADHLLDMGFRKDIERIIAAVPKQRQTLLFSATVPDEVRQ 519
Query: 579 ---LVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILHHLLKEHILGTPDYKVI 635
+ L+R+H +++T+ GS +T +++Q +VAP E HF +L+ +LKEHI DYKV+
Sbjct: 520 ISHIALRRDHEFVNTIEEGSEDTHAQVRQMQIVAPLEKHFSLLYAILKEHIANDVDYKVL 579
Query: 636 VFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEFRASKRLILVTSDVSARGM 695
VFC+T MVT ++ LL E+ +N+RE++SRK Q YR ++S+EFR SK LILVTSDVSARG+
Sbjct: 580 VFCTTAMVTRMVADLLGELNLNIREIHSRKAQSYRTKVSDEFRKSKGLILVTSDVSARGV 639
Query: 696 DYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLAPWEEYFLDDLKDLPLDKLQ 755
DYPDVT V+QVG+P DREQYIHRLGRTGR+GKEG+G+LLL PWEE+FL +KDLP+ K
Sbjct: 640 DYPDVTLVIQVGLPADREQYIHRLGRTGRKGKEGQGILLLTPWEEFFLSTVKDLPITKAP 699
Query: 756 LPHLNPEIQLQMDNHMAKIDNNVKEAAYHAWLGYYNSIREIGRDKTTLVELANKFAQSIG 815
+P ++PE + ++D + ++ KEAAY AWLGYYNS + +G+DK LVELAN+F++S+G
Sbjct: 700 MPLIDPETKKKVDRALVHVEMKNKEAAYQAWLGYYNSNKTVGKDKYRLVELANEFSRSMG 759
Query: 816 LQRPPPLFRKTALKMGLKDIPGIRLR 841
L PP + + KMGLK+IPG+R++
Sbjct: 760 LDNPPAISKLVLGKMGLKNIPGLRVK 785
>gi|356522518|ref|XP_003529893.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 31-like [Glycine
max]
Length = 703
Score = 580 bits (1495), Expect = e-162, Method: Compositional matrix adjust.
Identities = 276/473 (58%), Positives = 369/473 (78%), Gaps = 7/473 (1%)
Query: 376 LSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLL 435
LS+ RFD+C ISPL++K + AGY +MT VQEATL L+GKD + KAKTGTGK++AFLL
Sbjct: 231 LSETRFDQCSISPLSLKGVKDAGYEKMTVVQEATLPVILKGKDVLAKAKTGTGKTVAFLL 290
Query: 436 PAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTR 495
P+IE V K+ S PPI VL++CPTRELASQ AAEA LLK H IGV ++GGTR
Sbjct: 291 PSIEVVAKSPPSDRDHRRPPIAVLVICPTRELASQAAAEATKLLKYHPTIGVQVVIGGTR 350
Query: 496 FKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDV 555
++Q+R++++PCQILVATPGRL DH EN +G + RLMG+K+LVLDEADHLLD+GFRKD+
Sbjct: 351 LALEQKRMQANPCQILVATPGRLRDHTENTAGFATRLMGVKVLVLDEADHLLDMGFRKDI 410
Query: 556 ENIVDCLPRRRQSLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSCLVA 609
E I+ +P++RQ+L+FSAT+P+E + L+R+H +I+TV G+ ET ++ Q+ LVA
Sbjct: 411 EKIIAAVPKQRQTLMFSATVPEEVRQVCHIALRRDHEFINTVQEGTEETHSQVCQTHLVA 470
Query: 610 PHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLY 669
P + HF +L+ LLK+HI DYKV+VFC+T MVT L+ LL E+ +NVRE++SRKPQ Y
Sbjct: 471 PLDKHFSLLYVLLKDHIADDVDYKVLVFCTTAMVTRLVAELLGELNLNVREIHSRKPQSY 530
Query: 670 RDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEG 729
R R+SEEFR SK LILVTSDVSARG+DYPDVT V+QVG+P DREQYIHRLGRTGR GKEG
Sbjct: 531 RTRVSEEFRKSKGLILVTSDVSARGVDYPDVTLVIQVGLPADREQYIHRLGRTGRRGKEG 590
Query: 730 EGVLLLAPWEEYFLDDLKDLPLDKLQ-LPHLNPEIQLQMDNHMAKIDNNVKEAAYHAWLG 788
+G+LLLAPWE++FL +KDLP++K +P ++P+ + +++ ++ ++ KEAAY AWLG
Sbjct: 591 QGILLLAPWEDFFLSTVKDLPIEKAPVVPSVDPDTKKKVEKALSNVEMKNKEAAYQAWLG 650
Query: 789 YYNSIREIGRDKTTLVELANKFAQSIGLQRPPPLFRKTALKMGLKDIPGIRLR 841
YYNS +++GRDK LVELAN+F++S+GL PP + + KMGL++IPG+R +
Sbjct: 651 YYNSNKKVGRDKYRLVELANEFSRSMGLDNPPAIPKLVLGKMGLRNIPGLRAK 703
>gi|297806935|ref|XP_002871351.1| hypothetical protein ARALYDRAFT_487703 [Arabidopsis lyrata subsp.
lyrata]
gi|297317188|gb|EFH47610.1| hypothetical protein ARALYDRAFT_487703 [Arabidopsis lyrata subsp.
lyrata]
Length = 794
Score = 579 bits (1493), Expect = e-162, Method: Compositional matrix adjust.
Identities = 281/499 (56%), Positives = 373/499 (74%), Gaps = 7/499 (1%)
Query: 350 LIRKEISKNKLNGNGEKKEK-REEEPILSQKRFDECGISPLTIKALTAAGYIQMTRVQEA 408
LI+K S + + E + + LS+ RFD+ +SPL++KA+ AG+ MT VQEA
Sbjct: 296 LIKKAASAKAVQTDKPSGEHVKTSDSYLSKTRFDQFPLSPLSLKAIKDAGFETMTVVQEA 355
Query: 409 TLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELA 468
TL L+GKD + KAKTGTGK++AFLLPAIEAV+K+ +S PPI VL++CPTRELA
Sbjct: 356 TLPIILQGKDVLAKAKTGTGKTVAFLLPAIEAVIKSPPASRDNRQPPIIVLVVCPTRELA 415
Query: 469 SQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGL 528
SQ AAEA LLK H IGV ++GGT+ +QRR++++PCQILVATPGRL DHIEN SG
Sbjct: 416 SQAAAEANTLLKYHPSIGVQVVIGGTKLPTEQRRMQTNPCQILVATPGRLKDHIENTSGF 475
Query: 529 SVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQSLLFSATMPKEL------VLK 582
+ RLMG+K+LVLDEADHLLD+GFR+D+E I+ +P++RQ+ LFSAT+P+E+ LK
Sbjct: 476 ATRLMGVKVLVLDEADHLLDMGFRRDIERIIAAVPKQRQTFLFSATVPEEVRQICHVALK 535
Query: 583 REHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGM 642
R+H +I+ V G+ ET K+ Q ++A + HF +L+ LLKEHI DYKVI+FC+T M
Sbjct: 536 RDHEFINCVQEGTGETHQKVTQMYMIASLDRHFSLLYVLLKEHIADNVDYKVIIFCTTAM 595
Query: 643 VTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTS 702
VT L+ LL ++ +NVRE++SRKPQ YR R+S+EFR SK +ILVTSDVSARG+DYPDV+
Sbjct: 596 VTRLVADLLSQLNLNVREIHSRKPQSYRTRVSDEFRKSKAIILVTSDVSARGVDYPDVSL 655
Query: 703 VVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLAPWEEYFLDDLKDLPLDKLQLPHLNPE 762
VVQ+G+P DREQYIHRLGRTGR+GKEGEGVLLLAPWEEYF+ +KDLP+ K LP ++PE
Sbjct: 656 VVQMGLPSDREQYIHRLGRTGRKGKEGEGVLLLAPWEEYFMSSVKDLPITKSPLPPIDPE 715
Query: 763 IQLQMDNHMAKIDNNVKEAAYHAWLGYYNSIREIGRDKTTLVELANKFAQSIGLQRPPPL 822
++ +++++ KEAAY AWLGYY S + I RD T LVELAN+F++S+GL PP +
Sbjct: 716 AVKRVQKGLSQVEMKNKEAAYQAWLGYYKSQKMIARDTTRLVELANEFSRSMGLGSPPAI 775
Query: 823 FRKTALKMGLKDIPGIRLR 841
+ KMGLK++PG+R +
Sbjct: 776 PKNVLGKMGLKNVPGLRTK 794
>gi|109893656|sp|Q9FFQ1.2|RH31_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 31
Length = 716
Score = 576 bits (1485), Expect = e-161, Method: Compositional matrix adjust.
Identities = 275/479 (57%), Positives = 362/479 (75%), Gaps = 6/479 (1%)
Query: 367 KEKREEEPILSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTG 426
K + + L++ RFD +SPL++KA+ AGY MT VQEATL L+GKD + KAKTG
Sbjct: 236 KTRNANDSYLTKTRFDHYPLSPLSLKAIKDAGYETMTVVQEATLPIILKGKDVLAKAKTG 295
Query: 427 TGKSIAFLLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIG 486
TGK++AFLLP+IE V+K+ +S PPI L++CPTRELA+Q A EA LLK H IG
Sbjct: 296 TGKTVAFLLPSIEVVVKSPPTSPDNKRPPILALVICPTRELANQAATEANTLLKYHPSIG 355
Query: 487 VLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHL 546
V ++GGTR ++Q+R++++PCQILVATPGRL DHIEN G + RL G+K+LVLDEADHL
Sbjct: 356 VQVVIGGTRLGLEQKRMQTNPCQILVATPGRLKDHIENTPGFATRLKGVKVLVLDEADHL 415
Query: 547 LDLGFRKDVENIVDCLPRRRQSLLFSATMPKEL------VLKREHTYIDTVGLGSVETPV 600
LD+GFRKD+E I+ +P+ RQ+ LFSAT+P+E+ L+R+H +++ V G++ET
Sbjct: 416 LDMGFRKDIERIISAVPKERQTFLFSATVPEEVRQICLVALRRDHEFVNCVHEGTIETHQ 475
Query: 601 KIKQSCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVRE 660
+++Q ++A + HF +L+ LL+EHI+G DYKVIVFC+T MVT L+ LL E+ +NVRE
Sbjct: 476 QVRQMHMIASLDRHFSLLYTLLREHIMGNVDYKVIVFCTTAMVTKLVADLLGELNLNVRE 535
Query: 661 MYSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLG 720
++SRKPQ YR R+S EFR SK LILVTSDVSARG+DYPDVT V+QVG+P DREQYIHRLG
Sbjct: 536 IHSRKPQSYRTRVSNEFRKSKGLILVTSDVSARGVDYPDVTLVLQVGLPKDREQYIHRLG 595
Query: 721 RTGREGKEGEGVLLLAPWEEYFLDDLKDLPLDKLQLPHLNPEIQLQMDNHMAKIDNNVKE 780
RTGR+GKEGEG+LLLAPWEEYFL LKDLP+ K LP ++PE ++ + ++ KE
Sbjct: 596 RTGRKGKEGEGILLLAPWEEYFLSSLKDLPITKSPLPSIDPETVKKVQKALCHVEMRNKE 655
Query: 781 AAYHAWLGYYNSIREIGRDKTTLVELANKFAQSIGLQRPPPLFRKTALKMGLKDIPGIR 839
AAY AWLGYYNS + IGRDK LVELAN+F++S+GL PP + + KMGLK++PG+R
Sbjct: 656 AAYQAWLGYYNSQKMIGRDKDRLVELANEFSRSMGLDNPPAIPKLILGKMGLKNVPGLR 714
>gi|334188604|ref|NP_201168.2| DEAD-box ATP-dependent RNA helicase 31 [Arabidopsis thaliana]
gi|332010396|gb|AED97779.1| DEAD-box ATP-dependent RNA helicase 31 [Arabidopsis thaliana]
Length = 788
Score = 575 bits (1482), Expect = e-161, Method: Compositional matrix adjust.
Identities = 275/479 (57%), Positives = 362/479 (75%), Gaps = 6/479 (1%)
Query: 367 KEKREEEPILSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTG 426
K + + L++ RFD +SPL++KA+ AGY MT VQEATL L+GKD + KAKTG
Sbjct: 308 KTRNANDSYLTKTRFDHYPLSPLSLKAIKDAGYETMTVVQEATLPIILKGKDVLAKAKTG 367
Query: 427 TGKSIAFLLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIG 486
TGK++AFLLP+IE V+K+ +S PPI L++CPTRELA+Q A EA LLK H IG
Sbjct: 368 TGKTVAFLLPSIEVVVKSPPTSPDNKRPPILALVICPTRELANQAATEANTLLKYHPSIG 427
Query: 487 VLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHL 546
V ++GGTR ++Q+R++++PCQILVATPGRL DHIEN G + RL G+K+LVLDEADHL
Sbjct: 428 VQVVIGGTRLGLEQKRMQTNPCQILVATPGRLKDHIENTPGFATRLKGVKVLVLDEADHL 487
Query: 547 LDLGFRKDVENIVDCLPRRRQSLLFSATMPKEL------VLKREHTYIDTVGLGSVETPV 600
LD+GFRKD+E I+ +P+ RQ+ LFSAT+P+E+ L+R+H +++ V G++ET
Sbjct: 488 LDMGFRKDIERIISAVPKERQTFLFSATVPEEVRQICLVALRRDHEFVNCVHEGTIETHQ 547
Query: 601 KIKQSCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVRE 660
+++Q ++A + HF +L+ LL+EHI+G DYKVIVFC+T MVT L+ LL E+ +NVRE
Sbjct: 548 QVRQMHMIASLDRHFSLLYTLLREHIMGNVDYKVIVFCTTAMVTKLVADLLGELNLNVRE 607
Query: 661 MYSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLG 720
++SRKPQ YR R+S EFR SK LILVTSDVSARG+DYPDVT V+QVG+P DREQYIHRLG
Sbjct: 608 IHSRKPQSYRTRVSNEFRKSKGLILVTSDVSARGVDYPDVTLVLQVGLPKDREQYIHRLG 667
Query: 721 RTGREGKEGEGVLLLAPWEEYFLDDLKDLPLDKLQLPHLNPEIQLQMDNHMAKIDNNVKE 780
RTGR+GKEGEG+LLLAPWEEYFL LKDLP+ K LP ++PE ++ + ++ KE
Sbjct: 668 RTGRKGKEGEGILLLAPWEEYFLSSLKDLPITKSPLPSIDPETVKKVQKALCHVEMRNKE 727
Query: 781 AAYHAWLGYYNSIREIGRDKTTLVELANKFAQSIGLQRPPPLFRKTALKMGLKDIPGIR 839
AAY AWLGYYNS + IGRDK LVELAN+F++S+GL PP + + KMGLK++PG+R
Sbjct: 728 AAYQAWLGYYNSQKMIGRDKDRLVELANEFSRSMGLDNPPAIPKLILGKMGLKNVPGLR 786
>gi|10177044|dbj|BAB10456.1| RNA helicase [Arabidopsis thaliana]
Length = 522
Score = 571 bits (1472), Expect = e-160, Method: Compositional matrix adjust.
Identities = 275/479 (57%), Positives = 362/479 (75%), Gaps = 6/479 (1%)
Query: 367 KEKREEEPILSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTG 426
K + + L++ RFD +SPL++KA+ AGY MT VQEATL L+GKD + KAKTG
Sbjct: 42 KTRNANDSYLTKTRFDHYPLSPLSLKAIKDAGYETMTVVQEATLPIILKGKDVLAKAKTG 101
Query: 427 TGKSIAFLLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIG 486
TGK++AFLLP+IE V+K+ +S PPI L++CPTRELA+Q A EA LLK H IG
Sbjct: 102 TGKTVAFLLPSIEVVVKSPPTSPDNKRPPILALVICPTRELANQAATEANTLLKYHPSIG 161
Query: 487 VLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHL 546
V ++GGTR ++Q+R++++PCQILVATPGRL DHIEN G + RL G+K+LVLDEADHL
Sbjct: 162 VQVVIGGTRLGLEQKRMQTNPCQILVATPGRLKDHIENTPGFATRLKGVKVLVLDEADHL 221
Query: 547 LDLGFRKDVENIVDCLPRRRQSLLFSATMPKEL------VLKREHTYIDTVGLGSVETPV 600
LD+GFRKD+E I+ +P+ RQ+ LFSAT+P+E+ L+R+H +++ V G++ET
Sbjct: 222 LDMGFRKDIERIISAVPKERQTFLFSATVPEEVRQICLVALRRDHEFVNCVHEGTIETHQ 281
Query: 601 KIKQSCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVRE 660
+++Q ++A + HF +L+ LL+EHI+G DYKVIVFC+T MVT L+ LL E+ +NVRE
Sbjct: 282 QVRQMHMIASLDRHFSLLYTLLREHIMGNVDYKVIVFCTTAMVTKLVADLLGELNLNVRE 341
Query: 661 MYSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLG 720
++SRKPQ YR R+S EFR SK LILVTSDVSARG+DYPDVT V+QVG+P DREQYIHRLG
Sbjct: 342 IHSRKPQSYRTRVSNEFRKSKGLILVTSDVSARGVDYPDVTLVLQVGLPKDREQYIHRLG 401
Query: 721 RTGREGKEGEGVLLLAPWEEYFLDDLKDLPLDKLQLPHLNPEIQLQMDNHMAKIDNNVKE 780
RTGR+GKEGEG+LLLAPWEEYFL LKDLP+ K LP ++PE ++ + ++ KE
Sbjct: 402 RTGRKGKEGEGILLLAPWEEYFLSSLKDLPITKSPLPSIDPETVKKVQKALCHVEMRNKE 461
Query: 781 AAYHAWLGYYNSIREIGRDKTTLVELANKFAQSIGLQRPPPLFRKTALKMGLKDIPGIR 839
AAY AWLGYYNS + IGRDK LVELAN+F++S+GL PP + + KMGLK++PG+R
Sbjct: 462 AAYQAWLGYYNSQKMIGRDKDRLVELANEFSRSMGLDNPPAIPKLILGKMGLKNVPGLR 520
>gi|339716204|gb|AEJ88341.1| putative DEAD-box ATP-dependent RNA helicase [Tamarix hispida]
Length = 783
Score = 570 bits (1470), Expect = e-160, Method: Compositional matrix adjust.
Identities = 269/474 (56%), Positives = 367/474 (77%), Gaps = 6/474 (1%)
Query: 372 EEPILSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSI 431
++ LS+ RFD+C ISPL++KA+ AGY +MT VQEATL L+GKD + KAKTGTGK++
Sbjct: 308 DDSYLSETRFDQCDISPLSLKAVKDAGYEKMTMVQEATLPVILKGKDVMAKAKTGTGKTV 367
Query: 432 AFLLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLV 491
AFLLP+IE V+K+ Q PPI VL++CPTRELA+Q A EA +LLK H IG ++
Sbjct: 368 AFLLPSIELVVKSPPVGRDQKRPPILVLVVCPTRELANQAAKEAGSLLKYHPSIGCQVVI 427
Query: 492 GGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGF 551
GGTR V+Q+R++++PCQILVATPGRL DH+EN +G + RLMG+K+LVLDEADHLLD+GF
Sbjct: 428 GGTRLAVEQKRMQANPCQILVATPGRLRDHLENTAGFATRLMGVKVLVLDEADHLLDMGF 487
Query: 552 RKDVENIVDCLPRRRQSLLFSATMPKEL------VLKREHTYIDTVGLGSVETPVKIKQS 605
RKD+E I+ +P++RQ+LLFSAT+P E+ LKR+H +I+ V GS +T +++Q
Sbjct: 488 RKDIERIIAAVPKQRQTLLFSATIPDEVRQICHVALKRDHDFINKVQEGSGQTHSQVRQM 547
Query: 606 CLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRK 665
LVAP E HF +L+ +L EHI +YKV+VFC+T M+T L+ LL E+ +NVRE++SRK
Sbjct: 548 HLVAPLETHFLLLYAILGEHISDDVNYKVLVFCTTAMMTQLVADLLGELNLNVREIHSRK 607
Query: 666 PQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGRE 725
Q YR R+S+EFR SK LILVTSDVSARG+DYPDVT V+Q+G+P +EQYIHRLGRTGR+
Sbjct: 608 SQSYRTRVSDEFRKSKGLILVTSDVSARGVDYPDVTLVIQMGVPSGKEQYIHRLGRTGRK 667
Query: 726 GKEGEGVLLLAPWEEYFLDDLKDLPLDKLQLPHLNPEIQLQMDNHMAKIDNNVKEAAYHA 785
GKEG+G+LLLAPWEE+FL ++DLP+ K +P ++P+++ +++ ++ ++ KE+AY A
Sbjct: 668 GKEGQGILLLAPWEEFFLSSVRDLPITKAPVPMVDPDMRKKVERALSHVEMKHKESAYQA 727
Query: 786 WLGYYNSIREIGRDKTTLVELANKFAQSIGLQRPPPLFRKTALKMGLKDIPGIR 839
WLGYYNS + IGRDK LVELAN+F+QS+GL PP + + KMGL+++PG+R
Sbjct: 728 WLGYYNSNKNIGRDKFRLVELANEFSQSMGLANPPAIPKLVLGKMGLRNVPGLR 781
>gi|297797363|ref|XP_002866566.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297312401|gb|EFH42825.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 721
Score = 568 bits (1464), Expect = e-159, Method: Compositional matrix adjust.
Identities = 278/501 (55%), Positives = 369/501 (73%), Gaps = 14/501 (2%)
Query: 355 ISKNKLNGNGEKKEKREE--------EPILSQKRFDECGISPLTIKALTAAGYIQMTRVQ 406
+ K ++ G KEK E + L++ RFD+ +SPL++KA+ AGY MT VQ
Sbjct: 221 LKKKAVSAFGFDKEKVTEADMARNANDSYLTKTRFDQYPLSPLSLKAIKDAGYETMTVVQ 280
Query: 407 EATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLVPPIYVLILCPTRE 466
EATL L+GKD + KAKTGTGK++AFLLP+IE V+K+ +S PPI L++CPTRE
Sbjct: 281 EATLPIILKGKDVLAKAKTGTGKTVAFLLPSIEVVVKSPPTSPDNKRPPILALVICPTRE 340
Query: 467 LASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKS 526
LA+Q A EA LLK H IGV ++GGTR ++Q+R++++PCQILVATPGRL DHIEN
Sbjct: 341 LANQAATEANTLLKYHPSIGVQVVIGGTRLGLEQKRMQTNPCQILVATPGRLKDHIENTP 400
Query: 527 GLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQSLLFSATMPKEL------V 580
G + RL G+K+LVLDEADHLLD+GFRKD+E I+ +P+ RQ+ LFSAT+P+E+
Sbjct: 401 GFATRLKGVKVLVLDEADHLLDMGFRKDIERIISAVPKERQTFLFSATVPEEVRQICLVA 460
Query: 581 LKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCST 640
L+R+H +++ V G++ET +++Q ++A + HF +L+ LL+EHI+ DYKVIVFC+T
Sbjct: 461 LRRDHEFVNCVHEGTIETHQQVRQMHMIASLDRHFSLLYTLLREHIMDNVDYKVIVFCTT 520
Query: 641 GMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDV 700
MVT L+ LL E+ +NVRE++SRKPQ YR R+S EFR SK LILVTSDVSARG+DYPDV
Sbjct: 521 AMVTKLVADLLGEINLNVREIHSRKPQSYRTRVSNEFRKSKGLILVTSDVSARGVDYPDV 580
Query: 701 TSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLAPWEEYFLDDLKDLPLDKLQLPHLN 760
T V+QVG+P DREQYIHRLGRTGR+GKEGEG+LLLAPWEE FL LKDLP+ K LP ++
Sbjct: 581 TLVLQVGLPKDREQYIHRLGRTGRKGKEGEGILLLAPWEECFLSSLKDLPITKSPLPSID 640
Query: 761 PEIQLQMDNHMAKIDNNVKEAAYHAWLGYYNSIREIGRDKTTLVELANKFAQSIGLQRPP 820
PE ++ + ++ KEAAY AWLGYYNS + IGRDK LVELAN+F++S+GL PP
Sbjct: 641 PETVKKVQKALCHVEMRNKEAAYQAWLGYYNSQKMIGRDKDRLVELANEFSRSMGLDNPP 700
Query: 821 PLFRKTALKMGLKDIPGIRLR 841
+ + KMGLK++PG+R +
Sbjct: 701 AIPKLILGKMGLKNVPGLRAK 721
>gi|224067972|ref|XP_002302625.1| predicted protein [Populus trichocarpa]
gi|222844351|gb|EEE81898.1| predicted protein [Populus trichocarpa]
Length = 758
Score = 568 bits (1463), Expect = e-159, Method: Compositional matrix adjust.
Identities = 265/471 (56%), Positives = 361/471 (76%), Gaps = 6/471 (1%)
Query: 375 ILSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFL 434
+S+ RFD+C ISPL++K + AGY +MT VQ ATL L+GKD + KAKTGTGK++AFL
Sbjct: 286 FMSETRFDQCSISPLSLKGINHAGYEKMTVVQAATLPIILKGKDVLAKAKTGTGKTVAFL 345
Query: 435 LPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGT 494
LP+IE V+K+ Q PPI VL++CPTRELA+Q A EA LLK H IGV ++GG
Sbjct: 346 LPSIEVVVKSPPHDRDQKRPPILVLVVCPTRELATQAATEAKVLLKYHPAIGVQVVIGGV 405
Query: 495 RFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKD 554
R ++Q+ ++++ CQILVATPGRL DHIEN +G + RLMG+K+LVLDEAD LLD+GFRKD
Sbjct: 406 RIALEQKSMQANLCQILVATPGRLKDHIENTAGFATRLMGVKVLVLDEADRLLDMGFRKD 465
Query: 555 VENIVDCLPRRRQSLLFSATMPKEL------VLKREHTYIDTVGLGSVETPVKIKQSCLV 608
+E I+ +P++RQ+L+FSAT+P+E+ LKR+H +I+TV G+ +T K++Q +V
Sbjct: 466 IEKIIAAIPKQRQTLMFSATVPEEVRQICHSALKRDHEFINTVQEGAEDTHSKVRQMHVV 525
Query: 609 APHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQL 668
AP + F L+ +LK+H+ PDYKVIVFC+T VT L+ LL E+ +N+RE++SRK Q
Sbjct: 526 APLDKQFPFLYAILKDHMADDPDYKVIVFCTTARVTGLVARLLGELNLNIREIHSRKAQT 585
Query: 669 YRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKE 728
YR R+S+EFR SK LILVTSDVSARG+DYPDVT V+QVG+P REQYIHRLGRTGR+GKE
Sbjct: 586 YRTRVSDEFRKSKSLILVTSDVSARGVDYPDVTLVIQVGLPASREQYIHRLGRTGRKGKE 645
Query: 729 GEGVLLLAPWEEYFLDDLKDLPLDKLQLPHLNPEIQLQMDNHMAKIDNNVKEAAYHAWLG 788
GEG+LLLAPWEE+FL +KDLP+ K +P ++P+ + +M+ ++++D N KE+AY AWLG
Sbjct: 646 GEGILLLAPWEEFFLSTVKDLPITKAPVPSIDPDTKKKMERALSQVDMNSKESAYQAWLG 705
Query: 789 YYNSIREIGRDKTTLVELANKFAQSIGLQRPPPLFRKTALKMGLKDIPGIR 839
YYNS +++G DK LVELAN+F++S+GL PP + + KMGL+++PG+R
Sbjct: 706 YYNSQKKVGNDKHRLVELANEFSRSMGLDTPPAIPKLVLGKMGLRNVPGLR 756
>gi|222635678|gb|EEE65810.1| hypothetical protein OsJ_21540 [Oryza sativa Japonica Group]
Length = 921
Score = 560 bits (1442), Expect = e-156, Method: Compositional matrix adjust.
Identities = 293/556 (52%), Positives = 386/556 (69%), Gaps = 25/556 (4%)
Query: 292 SDDDSDIDSEDVDEKVEGWRD--VKKMGSSASLGKYDMKITKRVPLKSLEDEHDFEEQVE 349
S+DDS++ D D+ G+ D G +L + K P +S++ E +E V
Sbjct: 381 SEDDSELGEVDEDDGPSGFEDDLFDDEGGEKNLVESPAK--NSAPFESIKGEPIDQEGVV 438
Query: 350 LIRKEISKNKLNGNGEKKEKREEEPILSQKRFDECGISPLTIKALTAAGYIQMTRVQEAT 409
R+ +G G+ LSQ RFDEC +SPLT+K + AAGY +MT VQEAT
Sbjct: 439 HTRE-------SGGGDS--------YLSQTRFDECSLSPLTLKGVKAAGYERMTAVQEAT 483
Query: 410 LSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELAS 469
L L+GKD + KAKTGTGK++AFLLPAIE V K + PPI V+++CPTRELA
Sbjct: 484 LPIILKGKDVLAKAKTGTGKTVAFLLPAIEVVSKLPPIDCDKKRPPISVVVVCPTRELAD 543
Query: 470 QIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLS 529
Q AAEA LLK H IGV ++GGTR ++Q+R+ ++PCQILVATPGRL DH+EN G +
Sbjct: 544 QAAAEANKLLKFHPSIGVQLVIGGTRMALEQKRMHTNPCQILVATPGRLKDHMENTPGFA 603
Query: 530 VRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQSLLFSATMPKE------LVLKR 583
RLMG+K+L+LDEAD LLD+GFR D+E IV LP++RQ+LLFSAT+P E + +KR
Sbjct: 604 TRLMGVKVLILDEADRLLDMGFRTDIERIVAALPKQRQTLLFSATVPDEVRQVCHIAMKR 663
Query: 584 EHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMV 643
+ +++TV GS ET ++KQ +VAP + F IL+ LL +HI DYKVIVFC+T V
Sbjct: 664 DLEFVNTVEEGSEETHSQVKQMHVVAPLDKQFSILYGLLTDHISENVDYKVIVFCTTAKV 723
Query: 644 TSLLYLLLREMKMNVREMYSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSV 703
TSL+ LL E+K+NVRE++SRKPQ YR RIS+EF+ SK LILV+SDVSARG+DYP+VT V
Sbjct: 724 TSLVAELLSELKLNVREIHSRKPQSYRTRISKEFKESKGLILVSSDVSARGVDYPNVTLV 783
Query: 704 VQVGIPPDREQYIHRLGRTGREGKEGEGVLLLAPWEEYFLDDLKDLPLDKLQLPHLNPEI 763
VQ+G+P DREQYIHRLGRTGR G EG G+LLLAPWEEYFL +KDLP+ + LP ++ +
Sbjct: 784 VQMGVPTDREQYIHRLGRTGRRGNEGSGILLLAPWEEYFLRSIKDLPITEATLPLIDLDT 843
Query: 764 QLQMDNHMAKIDNNVKEAAYHAWLGYYNSIREIGRDKTTLVELANKFAQSIGLQRPPPLF 823
+ +++ +A ++ KE AY AWLGYYNS + IGRDK LV LAN+F++S+GL PP +
Sbjct: 844 KRKVEKALAHVEVKDKELAYQAWLGYYNSNKFIGRDKYQLVSLANEFSRSLGLNNPPAVP 903
Query: 824 RKTALKMGLKDIPGIR 839
+ KMGL +IPG+R
Sbjct: 904 KLVLRKMGLNNIPGLR 919
>gi|297806937|ref|XP_002871352.1| dead box RNA helicase [Arabidopsis lyrata subsp. lyrata]
gi|297317189|gb|EFH47611.1| dead box RNA helicase [Arabidopsis lyrata subsp. lyrata]
Length = 558
Score = 559 bits (1441), Expect = e-156, Method: Compositional matrix adjust.
Identities = 278/508 (54%), Positives = 370/508 (72%), Gaps = 12/508 (2%)
Query: 339 EDEHDFEEQVELIRKEISKNKLNGNGEKKEKREEEPILSQKRFDECGISPLTIKALTAAG 398
E + D +E LI+K S ++ K + LS+ RFD+ +SPL++K + AG
Sbjct: 41 EGKSDVDE--PLIKKAASTKPVDSQIAK----TSDSYLSKTRFDQFPLSPLSLKGIVDAG 94
Query: 399 YIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLVPPIYV 458
+ MT VQEATL L+GKD + KAKTGTGK++AFLLP+IEAV+K+ +S PPI V
Sbjct: 95 FKTMTVVQEATLPLILQGKDILAKAKTGTGKTVAFLLPSIEAVIKSPPASRDNRHPPIIV 154
Query: 459 LILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILVATPGRL 518
L++CPTRELA Q AAEA LLK H IGV ++GGT+ +QRRL+ PCQILVATPGRL
Sbjct: 155 LVVCPTRELACQAAAEANILLKYHPSIGVQVVIGGTKLPTEQRRLQKSPCQILVATPGRL 214
Query: 519 LDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQSLLFSATMPKE 578
DHI+N SG + RLMG+K+LVLDEADHLLD+GFR+++E I+ +P++RQ+ LFSAT+P+E
Sbjct: 215 KDHIDNTSGFATRLMGVKVLVLDEADHLLDMGFRREIERIIAAVPKQRQTFLFSATVPEE 274
Query: 579 L------VLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILHHLLKEHILGTPDY 632
+ LKR+H +++ V G+ ET K+ Q ++A + HF +L+ LLK+HI Y
Sbjct: 275 VRQMCHVALKRDHEFVNCVQEGAGETHQKVSQMYMIASLDRHFSLLYGLLKKHIADNVGY 334
Query: 633 KVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEFRASKRLILVTSDVSA 692
KVI+FC+T MVT L+ LL ++ +NVRE++SRKPQ YR R+S+EFR SK +ILVTSDVSA
Sbjct: 335 KVIIFCTTAMVTRLVADLLGKLSLNVREIHSRKPQSYRTRVSDEFRKSKSIILVTSDVSA 394
Query: 693 RGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLAPWEEYFLDDLKDLPLD 752
RG+DYPDV+ VVQ+G+P DREQYIHRLGRTGR+GKEGEGVLLLAPWEEYFL +KDLP+
Sbjct: 395 RGVDYPDVSLVVQMGLPSDREQYIHRLGRTGRKGKEGEGVLLLAPWEEYFLSSVKDLPIT 454
Query: 753 KLQLPHLNPEIQLQMDNHMAKIDNNVKEAAYHAWLGYYNSIREIGRDKTTLVELANKFAQ 812
K LP ++ E ++ + +++ KEAAY AWLGYY S ++I RD T LVELAN+F++
Sbjct: 455 KSSLPPIDHEAVKKVQKGLTQVEMTNKEAAYQAWLGYYKSQKKIARDTTRLVELANEFSR 514
Query: 813 SIGLQRPPPLFRKTALKMGLKDIPGIRL 840
S+GL PP + KMGLK++PGIR+
Sbjct: 515 SMGLSIPPAIPINVLGKMGLKNVPGIRV 542
>gi|218198307|gb|EEC80734.1| hypothetical protein OsI_23209 [Oryza sativa Indica Group]
Length = 921
Score = 558 bits (1439), Expect = e-156, Method: Compositional matrix adjust.
Identities = 293/556 (52%), Positives = 385/556 (69%), Gaps = 25/556 (4%)
Query: 292 SDDDSDIDSEDVDEKVEGWRD--VKKMGSSASLGKYDMKITKRVPLKSLEDEHDFEEQVE 349
S+DD ++ D D+ G+ D G +L + K P +S++ E +E V
Sbjct: 381 SEDDCELGEVDEDDGPSGFEDDLFDDEGGEKNLVESPAK--NSAPFESIKGEPVDQEGVV 438
Query: 350 LIRKEISKNKLNGNGEKKEKREEEPILSQKRFDECGISPLTIKALTAAGYIQMTRVQEAT 409
R+ +G G+ LSQ RFDEC +SPLT+K + AAGY +MT VQEAT
Sbjct: 439 HTRE-------SGGGDS--------YLSQTRFDECSLSPLTLKGVKAAGYERMTAVQEAT 483
Query: 410 LSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELAS 469
L L+GKD + KAKTGTGK++AFLLPAIE V K Q PPI V+++CPTRELA
Sbjct: 484 LPIILKGKDVLAKAKTGTGKTVAFLLPAIEVVSKLPPIDRDQKRPPISVVVVCPTRELAD 543
Query: 470 QIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLS 529
Q AAEA LLK H IGV ++GGTR ++Q+R+ ++PCQILVATPGRL DH+EN G +
Sbjct: 544 QAAAEANKLLKFHPSIGVQLVIGGTRMALEQKRMHTNPCQILVATPGRLKDHMENTPGFA 603
Query: 530 VRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQSLLFSATMPKE------LVLKR 583
RLMG+K+L+LDEAD LLD+GFR D+E IV LP++RQ+LLFSAT+P E + +KR
Sbjct: 604 TRLMGVKVLILDEADRLLDMGFRTDIERIVAALPKQRQTLLFSATVPDEVRQVCHIAMKR 663
Query: 584 EHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMV 643
+ +++TV GS ET ++KQ +VAP + F IL+ LL +HI DYKVIVFC+T V
Sbjct: 664 DLEFVNTVEEGSEETHSQVKQMHVVAPLDKQFSILYGLLTDHISENVDYKVIVFCTTAKV 723
Query: 644 TSLLYLLLREMKMNVREMYSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSV 703
TSL+ LL E+K+NVRE++SRKPQ YR RIS+EF+ SK LILV+SDVSARG+DYP+VT V
Sbjct: 724 TSLVAELLSELKLNVREIHSRKPQSYRTRISKEFKESKGLILVSSDVSARGVDYPNVTLV 783
Query: 704 VQVGIPPDREQYIHRLGRTGREGKEGEGVLLLAPWEEYFLDDLKDLPLDKLQLPHLNPEI 763
VQ+G+P DREQYIHRLGRTGR G EG G+LLLAPWEEYFL +KDLP+ + LP ++ +
Sbjct: 784 VQMGVPTDREQYIHRLGRTGRRGNEGSGILLLAPWEEYFLRSIKDLPITEATLPLIDLDT 843
Query: 764 QLQMDNHMAKIDNNVKEAAYHAWLGYYNSIREIGRDKTTLVELANKFAQSIGLQRPPPLF 823
+ +++ +A ++ KE AY AWLGYYNS + IGRDK LV LAN+F++S+GL PP +
Sbjct: 844 KRKVEKALAHVEVKDKELAYQAWLGYYNSNKFIGRDKYQLVSLANEFSRSLGLNNPPAVP 903
Query: 824 RKTALKMGLKDIPGIR 839
+ KMGL +IPG+R
Sbjct: 904 KLVLRKMGLNNIPGLR 919
>gi|357124203|ref|XP_003563793.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 31-like
[Brachypodium distachyon]
Length = 540
Score = 557 bits (1436), Expect = e-156, Method: Compositional matrix adjust.
Identities = 274/474 (57%), Positives = 357/474 (75%), Gaps = 8/474 (1%)
Query: 372 EEPILSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSI 431
++ LSQ RFDEC +SPLT+K + AAGY +MT VQEATL L+GKD + KA+TGTGK++
Sbjct: 67 DDSYLSQTRFDECSLSPLTLKGVKAAGYERMTAVQEATLPIILKGKDVLAKARTGTGKTV 126
Query: 432 AFLLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLV 491
AFLLPAIE V K + Q PPI V+++CPTRELA Q AAEA LLK H IGV ++
Sbjct: 127 AFLLPAIEVVSKLPPND--QKKPPISVVVVCPTRELADQAAAEANKLLKFHASIGVQLVI 184
Query: 492 GGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGF 551
GGTR ++Q+R+ ++PCQILVATPGRL DH+EN G + RLMG+K+L+LDEAD LLD+GF
Sbjct: 185 GGTRMALEQKRMHTNPCQILVATPGRLKDHMENTPGFATRLMGVKILILDEADRLLDMGF 244
Query: 552 RKDVENIVDCLPRRRQSLLFSATMPKEL------VLKREHTYIDTVGLGSVETPVKIKQS 605
R D+E IV LP++RQ+LLFSAT+P E+ +KR+ +++TV GS ET ++KQ
Sbjct: 245 RTDIEKIVAALPKQRQTLLFSATVPDEVRQVCYVAMKRDLEFVNTVQEGSEETHSQVKQM 304
Query: 606 CLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRK 665
+VAP + F +L+ LLK+HI DYKVIVFC+T VTSL+ LL E+K+NVRE++SRK
Sbjct: 305 HIVAPLDKQFSMLYGLLKDHISENVDYKVIVFCTTAKVTSLVAELLSELKLNVREIHSRK 364
Query: 666 PQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGRE 725
PQ YR RIS+EF+ SK LILV+SDVSARG+DYP+VT VVQ+G+P DREQYIHRLGRTGR
Sbjct: 365 PQSYRTRISKEFKESKGLILVSSDVSARGVDYPNVTFVVQLGVPTDREQYIHRLGRTGRR 424
Query: 726 GKEGEGVLLLAPWEEYFLDDLKDLPLDKLQLPHLNPEIQLQMDNHMAKIDNNVKEAAYHA 785
G EG G+LLLAPWEEYFL +KDLP+ + P ++ + + +++ +A ++ KE+AY A
Sbjct: 425 GNEGSGLLLLAPWEEYFLKSIKDLPITEATAPLVDLDTKRKVEKALAHVEVKDKESAYQA 484
Query: 786 WLGYYNSIREIGRDKTTLVELANKFAQSIGLQRPPPLFRKTALKMGLKDIPGIR 839
WLGYYNS + IGRDK LV LAN+F++S+GL PP L + KMGL +IPG+R
Sbjct: 485 WLGYYNSNKHIGRDKYQLVSLANEFSRSLGLNNPPALTKLILRKMGLSNIPGLR 538
>gi|143454912|sp|Q0DBU5.2|RH31_ORYSJ RecName: Full=DEAD-box ATP-dependent RNA helicase 31
Length = 547
Score = 557 bits (1436), Expect = e-156, Method: Compositional matrix adjust.
Identities = 293/556 (52%), Positives = 386/556 (69%), Gaps = 25/556 (4%)
Query: 292 SDDDSDIDSEDVDEKVEGWRD--VKKMGSSASLGKYDMKITKRVPLKSLEDEHDFEEQVE 349
S+DDS++ D D+ G+ D G +L + K P +S++ E +E V
Sbjct: 7 SEDDSELGEVDEDDGPSGFEDDLFDDEGGEKNLVESPAK--NSAPFESIKGEPIDQEGVV 64
Query: 350 LIRKEISKNKLNGNGEKKEKREEEPILSQKRFDECGISPLTIKALTAAGYIQMTRVQEAT 409
R+ +G G+ LSQ RFDEC +SPLT+K + AAGY +MT VQEAT
Sbjct: 65 HTRE-------SGGGDS--------YLSQTRFDECSLSPLTLKGVKAAGYERMTAVQEAT 109
Query: 410 LSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELAS 469
L L+GKD + KAKTGTGK++AFLLPAIE V K + PPI V+++CPTRELA
Sbjct: 110 LPIILKGKDVLAKAKTGTGKTVAFLLPAIEVVSKLPPIDCDKKRPPISVVVVCPTRELAD 169
Query: 470 QIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLS 529
Q AAEA LLK H IGV ++GGTR ++Q+R+ ++PCQILVATPGRL DH+EN G +
Sbjct: 170 QAAAEANKLLKFHPSIGVQLVIGGTRMALEQKRMHTNPCQILVATPGRLKDHMENTPGFA 229
Query: 530 VRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQSLLFSATMPKE------LVLKR 583
RLMG+K+L+LDEAD LLD+GFR D+E IV LP++RQ+LLFSAT+P E + +KR
Sbjct: 230 TRLMGVKVLILDEADRLLDMGFRTDIERIVAALPKQRQTLLFSATVPDEVRQVCHIAMKR 289
Query: 584 EHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMV 643
+ +++TV GS ET ++KQ +VAP + F IL+ LL +HI DYKVIVFC+T V
Sbjct: 290 DLEFVNTVEEGSEETHSQVKQMHVVAPLDKQFSILYGLLTDHISENVDYKVIVFCTTAKV 349
Query: 644 TSLLYLLLREMKMNVREMYSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSV 703
TSL+ LL E+K+NVRE++SRKPQ YR RIS+EF+ SK LILV+SDVSARG+DYP+VT V
Sbjct: 350 TSLVAELLSELKLNVREIHSRKPQSYRTRISKEFKESKGLILVSSDVSARGVDYPNVTLV 409
Query: 704 VQVGIPPDREQYIHRLGRTGREGKEGEGVLLLAPWEEYFLDDLKDLPLDKLQLPHLNPEI 763
VQ+G+P DREQYIHRLGRTGR G EG G+LLLAPWEEYFL +KDLP+ + LP ++ +
Sbjct: 410 VQMGVPTDREQYIHRLGRTGRRGNEGSGILLLAPWEEYFLRSIKDLPITEATLPLIDLDT 469
Query: 764 QLQMDNHMAKIDNNVKEAAYHAWLGYYNSIREIGRDKTTLVELANKFAQSIGLQRPPPLF 823
+ +++ +A ++ KE AY AWLGYYNS + IGRDK LV LAN+F++S+GL PP +
Sbjct: 470 KRKVEKALAHVEVKDKELAYQAWLGYYNSNKFIGRDKYQLVSLANEFSRSLGLNNPPAVP 529
Query: 824 RKTALKMGLKDIPGIR 839
+ KMGL +IPG+R
Sbjct: 530 KLVLRKMGLNNIPGLR 545
>gi|15242323|ref|NP_196479.1| DEAD-box ATP-dependent RNA helicase 25 [Arabidopsis thaliana]
gi|108861886|sp|Q94C75.2|RH25_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 25
gi|3776023|emb|CAA09212.1| RNA helicase [Arabidopsis thaliana]
gi|9759356|dbj|BAB10011.1| RNA helicase [Arabidopsis thaliana]
gi|23297113|gb|AAN13096.1| RNA helicase [Arabidopsis thaliana]
gi|332003947|gb|AED91330.1| DEAD-box ATP-dependent RNA helicase 25 [Arabidopsis thaliana]
Length = 563
Score = 556 bits (1434), Expect = e-155, Method: Compositional matrix adjust.
Identities = 271/471 (57%), Positives = 354/471 (75%), Gaps = 6/471 (1%)
Query: 376 LSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLL 435
LS+ RFD+ +SPLT+K + AG+ MT VQEATL L+GKD + KAKTGTGK++AFLL
Sbjct: 77 LSKTRFDQFPLSPLTLKGIEDAGFKTMTVVQEATLPLILQGKDILAKAKTGTGKTVAFLL 136
Query: 436 PAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTR 495
P+IEAV+KA +S PPI VL++CPTRELA Q AAEA LLK H IGV ++GGT+
Sbjct: 137 PSIEAVIKAPPASRDNRHPPIIVLVVCPTRELACQAAAEANILLKYHPSIGVQVVIGGTK 196
Query: 496 FKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDV 555
+QRRL+ PCQILVATPGRL DHI+N SG + RLMG+K+LVLDEADHLLD+GFR+++
Sbjct: 197 LPTEQRRLQKSPCQILVATPGRLKDHIDNTSGFATRLMGVKVLVLDEADHLLDMGFRREI 256
Query: 556 ENIVDCLPRRRQSLLFSATMPKEL------VLKREHTYIDTVGLGSVETPVKIKQSCLVA 609
E I+ +P++RQ+ LFSAT+ E+ LKR+H +++ V G+ ET K+ Q ++A
Sbjct: 257 ERIIAAVPKQRQTFLFSATVSDEVRQICHVALKRDHEFVNCVQEGAGETHQKVSQMYMIA 316
Query: 610 PHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLY 669
+ HF +L+ LLK+HI YKVI+FC+T MVT L+ LL ++ +NVRE++SRKPQ Y
Sbjct: 317 SLDRHFSLLYGLLKKHITDNVGYKVIIFCTTAMVTRLVADLLGKLSLNVREIHSRKPQSY 376
Query: 670 RDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEG 729
R R+S+EFR SK +ILVTSDVSARG+DYPDV+ VVQ+G+P DREQYIHRLGRTGR+GKEG
Sbjct: 377 RTRVSDEFRKSKSIILVTSDVSARGVDYPDVSLVVQMGLPSDREQYIHRLGRTGRKGKEG 436
Query: 730 EGVLLLAPWEEYFLDDLKDLPLDKLQLPHLNPEIQLQMDNHMAKIDNNVKEAAYHAWLGY 789
EGVLLLAPWEEYFL +KDLP+ K LP ++ E ++ + +++ KEAAY AWLGY
Sbjct: 437 EGVLLLAPWEEYFLSSVKDLPITKSSLPPIDHEAVKKVQKGLIQVEMTNKEAAYQAWLGY 496
Query: 790 YNSIREIGRDKTTLVELANKFAQSIGLQRPPPLFRKTALKMGLKDIPGIRL 840
Y S ++I RD T LVELAN+F++S+GL PP + KMGLK++PGIR+
Sbjct: 497 YKSQKKIARDTTRLVELANEFSRSMGLSIPPAIPVNILGKMGLKNVPGIRV 547
>gi|14334882|gb|AAK59619.1| putative RNA helicase [Arabidopsis thaliana]
Length = 563
Score = 555 bits (1429), Expect = e-155, Method: Compositional matrix adjust.
Identities = 270/471 (57%), Positives = 354/471 (75%), Gaps = 6/471 (1%)
Query: 376 LSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLL 435
LS+ RFD+ +SPLT+K + AG+ MT VQEATL L+GK+ + KAKTGTGK++AFLL
Sbjct: 77 LSKTRFDQFPLSPLTLKGIEDAGFKTMTVVQEATLPLILQGKNILAKAKTGTGKTVAFLL 136
Query: 436 PAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTR 495
P+IEAV+KA +S PPI VL++CPTRELA Q AAEA LLK H IGV ++GGT+
Sbjct: 137 PSIEAVIKAPPASRDNRHPPIIVLVVCPTRELACQAAAEANILLKYHPSIGVQVVIGGTK 196
Query: 496 FKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDV 555
+QRRL+ PCQILVATPGRL DHI+N SG + RLMG+K+LVLDEADHLLD+GFR+++
Sbjct: 197 LPTEQRRLQKSPCQILVATPGRLKDHIDNTSGFATRLMGVKVLVLDEADHLLDMGFRREI 256
Query: 556 ENIVDCLPRRRQSLLFSATMPKEL------VLKREHTYIDTVGLGSVETPVKIKQSCLVA 609
E I+ +P++RQ+ LFSAT+ E+ LKR+H +++ V G+ ET K+ Q ++A
Sbjct: 257 ERIIAAVPKQRQTFLFSATVSDEVRQICHVALKRDHEFVNCVQEGAGETHQKVSQMYMIA 316
Query: 610 PHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLY 669
+ HF +L+ LLK+HI YKVI+FC+T MVT L+ LL ++ +NVRE++SRKPQ Y
Sbjct: 317 SLDRHFSLLYGLLKKHITDNVGYKVIIFCTTAMVTRLVADLLGKLSLNVREIHSRKPQSY 376
Query: 670 RDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEG 729
R R+S+EFR SK +ILVTSDVSARG+DYPDV+ VVQ+G+P DREQYIHRLGRTGR+GKEG
Sbjct: 377 RTRVSDEFRKSKSIILVTSDVSARGVDYPDVSLVVQMGLPSDREQYIHRLGRTGRKGKEG 436
Query: 730 EGVLLLAPWEEYFLDDLKDLPLDKLQLPHLNPEIQLQMDNHMAKIDNNVKEAAYHAWLGY 789
EGVLLLAPWEEYFL +KDLP+ K LP ++ E ++ + +++ KEAAY AWLGY
Sbjct: 437 EGVLLLAPWEEYFLSSVKDLPITKSSLPPIDHEAVKKVQKGLIQVEMTNKEAAYQAWLGY 496
Query: 790 YNSIREIGRDKTTLVELANKFAQSIGLQRPPPLFRKTALKMGLKDIPGIRL 840
Y S ++I RD T LVELAN+F++S+GL PP + KMGLK++PGIR+
Sbjct: 497 YKSQKKIARDTTRLVELANEFSRSMGLSIPPAIPVNILGKMGLKNVPGIRV 547
>gi|413954170|gb|AFW86819.1| putative DEAD-box ATP-dependent RNA helicase family protein [Zea
mays]
Length = 924
Score = 554 bits (1427), Expect = e-155, Method: Compositional matrix adjust.
Identities = 279/515 (54%), Positives = 367/515 (71%), Gaps = 13/515 (2%)
Query: 338 LEDEHDFEEQVELIRKEISKNKL-------NGNGEKKEKREEEPILSQKRFDECGISPLT 390
EDE D E+ +I + + L N + + + + LSQKRFDEC +SPL+
Sbjct: 408 FEDEGDKEDVGHIIGNKSGSSMLPEDEPAKNESVQGRSAGGGDSYLSQKRFDECPLSPLS 467
Query: 391 IKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTT 450
+K + AAGY +MT VQEATL L+GKD + KAKTGTGK++AFLLPAIE V K
Sbjct: 468 LKGVKAAGYERMTAVQEATLPIILQGKDVLAKAKTGTGKTVAFLLPAIEVVSKLPPVDRD 527
Query: 451 QLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQI 510
PPI V+++CPTRELA Q AAEA LLK H IGV ++GGTR ++Q+R+ ++PCQI
Sbjct: 528 LKKPPISVVVVCPTRELADQAAAEANKLLKFHPSIGVQLVIGGTRMALEQKRMHTNPCQI 587
Query: 511 LVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQSLL 570
LVATPGRL DH+EN G + RL+G+K+L+LDEAD LLD+GFR D+E IV LP++RQ+LL
Sbjct: 588 LVATPGRLRDHMENTPGFATRLLGVKVLILDEADRLLDMGFRSDIEKIVAALPKQRQTLL 647
Query: 571 FSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILHHLLKE 624
FSAT+P E + +KR+ +++TV GS ET ++KQ L+AP + F L+ LL +
Sbjct: 648 FSATVPDEVRQVCHIAMKRDLEFVNTVQEGSEETHSQVKQMHLIAPLDKQFSNLYGLLTD 707
Query: 625 HILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEFRASKRLI 684
HI DYKVIVFC+T VTSL+ LL E+K+NVRE++SRKPQ YR RIS+EF+ SK LI
Sbjct: 708 HISENVDYKVIVFCTTAKVTSLVAELLSELKLNVREIHSRKPQSYRTRISKEFKESKGLI 767
Query: 685 LVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLAPWEEYFLD 744
LV+SDVSARG+DYP+VT VVQ+G+P DREQYIHRLGRTGR G EG G+LLLAPWEEYFL
Sbjct: 768 LVSSDVSARGVDYPNVTLVVQLGVPTDREQYIHRLGRTGRRGNEGTGILLLAPWEEYFLR 827
Query: 745 DLKDLPLDKLQLPHLNPEIQLQMDNHMAKIDNNVKEAAYHAWLGYYNSIREIGRDKTTLV 804
+ DLP+ + P ++ + + ++D +A ++ KE+AY AWLGYYNS + IGRDK LV
Sbjct: 828 SINDLPITEATQPLIDLDTKKKVDKALAHVEVKDKESAYQAWLGYYNSNKVIGRDKYQLV 887
Query: 805 ELANKFAQSIGLQRPPPLFRKTALKMGLKDIPGIR 839
LAN+F++S+GL PP + + KMGL +IPG+R
Sbjct: 888 SLANEFSRSMGLNNPPAVSKLALRKMGLNNIPGLR 922
>gi|414881423|tpg|DAA58554.1| TPA: putative DEAD-box ATP-dependent RNA helicase family protein
[Zea mays]
Length = 586
Score = 552 bits (1423), Expect = e-154, Method: Compositional matrix adjust.
Identities = 263/470 (55%), Positives = 356/470 (75%), Gaps = 7/470 (1%)
Query: 376 LSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLL 435
LS+ RFD+C ISPL++KA+ AGY +MT VQEATL L+GKD + KAKTGTGK++AFLL
Sbjct: 116 LSETRFDQCAISPLSMKAVKDAGYERMTEVQEATLPIILQGKDVLAKAKTGTGKTVAFLL 175
Query: 436 PAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTR 495
PAIE VL QL PPI +L++CPTRELA+Q+A EA LL+ H +GV ++GGTR
Sbjct: 176 PAIE-VLSTLPHQRGQLRPPINLLVMCPTRELANQVAVEARKLLRYHRTLGVQVVIGGTR 234
Query: 496 FKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDV 555
+QR ++++PCQILVATPGRL DH+EN G S RL G+K+LVLDEAD LLD+GFR+D+
Sbjct: 235 LTQEQRSMQANPCQILVATPGRLKDHLENTPGFSTRLKGVKVLVLDEADRLLDMGFRRDI 294
Query: 556 ENIVDCLPRRRQSLLFSATMPKEL------VLKREHTYIDTVGLGSVETPVKIKQSCLVA 609
E I+ +PR RQ+LLFSAT+P+E+ +K+++ +I+TV G ET ++ Q +VA
Sbjct: 295 EKIIASIPRERQTLLFSATVPEEVRQISHVAMKKDYRFINTVKEGDEETHAQVSQMYMVA 354
Query: 610 PHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLY 669
P +LHF IL+ +LK+H+ DYKVI+FC+T MVT L+ +L ++K+N+RE++SRK Q
Sbjct: 355 PLDLHFSILYDVLKKHVAEDADYKVIIFCTTAMVTKLVAEVLSQLKLNIREIHSRKSQSA 414
Query: 670 RDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEG 729
R ++S+EFR SK LILV+SDVSARG+DYPDVT V+QVG+P DREQYIHRLGRTGR+GKEG
Sbjct: 415 RTKVSDEFRKSKGLILVSSDVSARGVDYPDVTLVIQVGVPADREQYIHRLGRTGRKGKEG 474
Query: 730 EGVLLLAPWEEYFLDDLKDLPLDKLQLPHLNPEIQLQMDNHMAKIDNNVKEAAYHAWLGY 789
+G+LLLAPWE+YFL +KDL + + +P ++ ++ ++ N + K++ KE AY AWLGY
Sbjct: 475 QGLLLLAPWEKYFLGAVKDLSIAESAVPPVDSSVETEVRNAVRKVEMKSKECAYQAWLGY 534
Query: 790 YNSIREIGRDKTTLVELANKFAQSIGLQRPPPLFRKTALKMGLKDIPGIR 839
YNS + IGRDK+ LV LA +F+QS+GL PP + R KMGL ++PG+R
Sbjct: 535 YNSNKTIGRDKSRLVHLAEEFSQSMGLAVPPAIPRNILRKMGLNNVPGLR 584
>gi|242053633|ref|XP_002455962.1| hypothetical protein SORBIDRAFT_03g028090 [Sorghum bicolor]
gi|241927937|gb|EES01082.1| hypothetical protein SORBIDRAFT_03g028090 [Sorghum bicolor]
Length = 588
Score = 548 bits (1413), Expect = e-153, Method: Compositional matrix adjust.
Identities = 261/470 (55%), Positives = 354/470 (75%), Gaps = 7/470 (1%)
Query: 376 LSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLL 435
LS+ RFD+C ISPL++KA+ AGY +MT VQ ATL L+GKD + KAKTGTGK++AFLL
Sbjct: 118 LSETRFDQCAISPLSLKAVKDAGYERMTEVQAATLPIILQGKDVLAKAKTGTGKTVAFLL 177
Query: 436 PAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTR 495
PAIE VL QL PPI +L++CPTRELA+Q+A EA LL+ H +GV ++GGTR
Sbjct: 178 PAIE-VLSTLPRERNQLRPPINLLVMCPTRELANQVAVEARKLLRYHRSLGVQVVIGGTR 236
Query: 496 FKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDV 555
+QR ++++PCQILVATPGRL DH+EN G S RL G+K+LVLDEAD LLD+GFR+D+
Sbjct: 237 LTQEQRSMQANPCQILVATPGRLKDHLENTPGFSSRLKGVKVLVLDEADRLLDMGFRRDI 296
Query: 556 ENIVDCLPRRRQSLLFSATMPKEL------VLKREHTYIDTVGLGSVETPVKIKQSCLVA 609
E I+ +PR RQ+LLFSAT+P+E+ +K+++ +++TV G ET ++ Q +VA
Sbjct: 297 EKIIASIPRERQTLLFSATVPEEVRQISHVAMKKDYRFVNTVKEGDEETHAQVSQMYMVA 356
Query: 610 PHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLY 669
P +LHF IL+ +LK+H+ DYKVI+FC+T MVT L+ +L ++K+N+RE++SRK Q
Sbjct: 357 PLDLHFSILYDVLKKHVAEDADYKVIIFCTTAMVTKLVAEVLSQLKLNIREIHSRKSQSA 416
Query: 670 RDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEG 729
R ++S+EFR SK LILV+SDVSARG+DYPDVT V+QVGIP DREQYIHRLGRTGR+GKEG
Sbjct: 417 RTKVSDEFRKSKGLILVSSDVSARGVDYPDVTLVIQVGIPADREQYIHRLGRTGRKGKEG 476
Query: 730 EGVLLLAPWEEYFLDDLKDLPLDKLQLPHLNPEIQLQMDNHMAKIDNNVKEAAYHAWLGY 789
+G+LLLAPWE+YFL +KDL + + +P ++ ++ ++ N + K++ KE AY AWLGY
Sbjct: 477 QGLLLLAPWEKYFLGTVKDLSIAESAVPPVDSSVETEVKNAVRKVEMKSKECAYQAWLGY 536
Query: 790 YNSIREIGRDKTTLVELANKFAQSIGLQRPPPLFRKTALKMGLKDIPGIR 839
YNS + IGRDK+ L LA +F+QS+GL PP + R KMGL ++PG+R
Sbjct: 537 YNSNKTIGRDKSRLAHLAEEFSQSMGLAVPPAIPRNILRKMGLNNVPGLR 586
>gi|414881422|tpg|DAA58553.1| TPA: putative DEAD-box ATP-dependent RNA helicase family protein
[Zea mays]
Length = 601
Score = 543 bits (1399), Expect = e-151, Method: Compositional matrix adjust.
Identities = 263/485 (54%), Positives = 356/485 (73%), Gaps = 22/485 (4%)
Query: 376 LSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLL 435
LS+ RFD+C ISPL++KA+ AGY +MT VQEATL L+GKD + KAKTGTGK++AFLL
Sbjct: 116 LSETRFDQCAISPLSMKAVKDAGYERMTEVQEATLPIILQGKDVLAKAKTGTGKTVAFLL 175
Query: 436 PAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTR 495
PAIE VL QL PPI +L++CPTRELA+Q+A EA LL+ H +GV ++GGTR
Sbjct: 176 PAIE-VLSTLPHQRGQLRPPINLLVMCPTRELANQVAVEARKLLRYHRTLGVQVVIGGTR 234
Query: 496 FKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDV 555
+QR ++++PCQILVATPGRL DH+EN G S RL G+K+LVLDEAD LLD+GFR+D+
Sbjct: 235 LTQEQRSMQANPCQILVATPGRLKDHLENTPGFSTRLKGVKVLVLDEADRLLDMGFRRDI 294
Query: 556 ENIVDCLPRRRQSLLFSATMPKEL------VLKREHTYIDTVGLGSVETPVKIKQSCLVA 609
E I+ +PR RQ+LLFSAT+P+E+ +K+++ +I+TV G ET ++ Q +VA
Sbjct: 295 EKIIASIPRERQTLLFSATVPEEVRQISHVAMKKDYRFINTVKEGDEETHAQVSQMYMVA 354
Query: 610 PHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLY 669
P +LHF IL+ +LK+H+ DYKVI+FC+T MVT L+ +L ++K+N+RE++SRK Q
Sbjct: 355 PLDLHFSILYDVLKKHVAEDADYKVIIFCTTAMVTKLVAEVLSQLKLNIREIHSRKSQSA 414
Query: 670 RDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEG 729
R ++S+EFR SK LILV+SDVSARG+DYPDVT V+QVG+P DREQYIHRLGRTGR+GKEG
Sbjct: 415 RTKVSDEFRKSKGLILVSSDVSARGVDYPDVTLVIQVGVPADREQYIHRLGRTGRKGKEG 474
Query: 730 EGVLLLAPWEEYFLDDLKDLPLDKLQLPHLNPEIQLQMD---------------NHMAKI 774
+G+LLLAPWE+YFL +KDL + + +P ++ ++ ++ N + K+
Sbjct: 475 QGLLLLAPWEKYFLGAVKDLSIAESAVPPVDSSVETEVSSMHYLFSTWLSDSVRNAVRKV 534
Query: 775 DNNVKEAAYHAWLGYYNSIREIGRDKTTLVELANKFAQSIGLQRPPPLFRKTALKMGLKD 834
+ KE AY AWLGYYNS + IGRDK+ LV LA +F+QS+GL PP + R KMGL +
Sbjct: 535 EMKSKECAYQAWLGYYNSNKTIGRDKSRLVHLAEEFSQSMGLAVPPAIPRNILRKMGLNN 594
Query: 835 IPGIR 839
+PG+R
Sbjct: 595 VPGLR 599
>gi|218188673|gb|EEC71100.1| hypothetical protein OsI_02884 [Oryza sativa Indica Group]
Length = 593
Score = 541 bits (1393), Expect = e-151, Method: Compositional matrix adjust.
Identities = 254/470 (54%), Positives = 353/470 (75%), Gaps = 6/470 (1%)
Query: 376 LSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLL 435
LS RFD+C ISPL++KA+ AGY +MT+VQEATL L+GKD + KAKTGTGK++AFLL
Sbjct: 122 LSDTRFDQCAISPLSLKAVKDAGYERMTQVQEATLPVILQGKDVLAKAKTGTGKTVAFLL 181
Query: 436 PAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTR 495
PAIE + +S QL P I +L++CPTRELA Q+A EA LLK H +GV ++GGTR
Sbjct: 182 PAIEVLSALPNSRRDQLRPSINLLVMCPTRELAIQVAVEAKKLLKYHRSLGVQVVIGGTR 241
Query: 496 FKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDV 555
+QR ++++PCQILVATPGRL DH+EN G S RL G+K+LVLDEAD LLD+GFR+D+
Sbjct: 242 LTQEQRSMQANPCQILVATPGRLKDHVENTPGFSTRLKGVKVLVLDEADRLLDMGFRRDI 301
Query: 556 ENIVDCLPRRRQSLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSCLVA 609
E I+ +P+ RQ+LLFSAT+P+E + +K+ + +I+TV G ET ++ Q ++A
Sbjct: 302 ERIIASVPKERQTLLFSATVPEEVRQISHIAMKKNYKFINTVKDGDEETHAQVSQMFMIA 361
Query: 610 PHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLY 669
P +LHF IL+ +LK+H+ DYKVI+FC+T MVT L+ +L ++++N+RE++SRK Q
Sbjct: 362 PLDLHFSILYDVLKKHVAEDADYKVIIFCTTAMVTKLVAEILSQLRLNIREIHSRKSQSA 421
Query: 670 RDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEG 729
R ++S+EFR S+ LILV+SDVSARG+DYPDVT V+QVG+P DR+QYIHRLGRTGR+GKEG
Sbjct: 422 RTKVSDEFRKSRGLILVSSDVSARGVDYPDVTLVIQVGVPADRQQYIHRLGRTGRKGKEG 481
Query: 730 EGVLLLAPWEEYFLDDLKDLPLDKLQLPHLNPEIQLQMDNHMAKIDNNVKEAAYHAWLGY 789
+G+LLLAPWE+YFL +KDL + + +P ++ Q + + + K++ KE AY AWLGY
Sbjct: 482 QGLLLLAPWEKYFLSSIKDLSISEATVPSVDSSTQTIVKDAVRKVEMRSKECAYQAWLGY 541
Query: 790 YNSIREIGRDKTTLVELANKFAQSIGLQRPPPLFRKTALKMGLKDIPGIR 839
YNS + IGR+K+ LV+LA +F+QS+ L PP + ++ KMGL ++PG+R
Sbjct: 542 YNSNKTIGREKSRLVKLAEEFSQSMELSVPPAIPKQILRKMGLNNVPGLR 591
>gi|115438621|ref|NP_001043590.1| Os01g0618400 [Oryza sativa Japonica Group]
gi|75322035|sp|Q5ZBH5.1|RH25_ORYSJ RecName: Full=DEAD-box ATP-dependent RNA helicase 25
gi|54290854|dbj|BAD61515.1| putative RNA helicase [Oryza sativa Japonica Group]
gi|113533121|dbj|BAF05504.1| Os01g0618400 [Oryza sativa Japonica Group]
gi|215695286|dbj|BAG90477.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222618865|gb|EEE54997.1| hypothetical protein OsJ_02628 [Oryza sativa Japonica Group]
Length = 594
Score = 540 bits (1391), Expect = e-150, Method: Compositional matrix adjust.
Identities = 254/470 (54%), Positives = 353/470 (75%), Gaps = 6/470 (1%)
Query: 376 LSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLL 435
LS RFD+C ISPL++KA+ AGY +MT+VQEATL L+GKD + KAKTGTGK++AFLL
Sbjct: 123 LSDTRFDQCTISPLSLKAVKDAGYERMTQVQEATLPVILQGKDVLAKAKTGTGKTVAFLL 182
Query: 436 PAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTR 495
PAIE + +S QL P I +L++CPTRELA Q+A EA LLK H +GV ++GGTR
Sbjct: 183 PAIEVLSALPNSRRDQLRPSINLLVMCPTRELAIQVAVEAKKLLKYHRSLGVQVVIGGTR 242
Query: 496 FKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDV 555
+QR ++++PCQILVATPGRL DH+EN G S RL G+K+LVLDEAD LLD+GFR+D+
Sbjct: 243 LTQEQRSMQANPCQILVATPGRLKDHVENTPGFSTRLKGVKVLVLDEADRLLDMGFRRDI 302
Query: 556 ENIVDCLPRRRQSLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSCLVA 609
E I+ +P+ RQ+LLFSAT+P+E + +K+ + +I+TV G ET ++ Q ++A
Sbjct: 303 ERIIASVPKERQTLLFSATVPEEVRQISHIAMKKNYKFINTVKDGDEETHAQVSQMFMIA 362
Query: 610 PHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLY 669
P +LHF IL+ +LK+H+ DYKVI+FC+T MVT L+ +L ++++N+RE++SRK Q
Sbjct: 363 PLDLHFSILYDVLKKHVAEDADYKVIIFCTTAMVTKLVAEILSQLRLNIREIHSRKSQSA 422
Query: 670 RDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEG 729
R ++S+EFR S+ LILV+SDVSARG+DYPDVT V+QVG+P DR+QYIHRLGRTGR+GKEG
Sbjct: 423 RTKVSDEFRKSRGLILVSSDVSARGVDYPDVTLVIQVGVPADRQQYIHRLGRTGRKGKEG 482
Query: 730 EGVLLLAPWEEYFLDDLKDLPLDKLQLPHLNPEIQLQMDNHMAKIDNNVKEAAYHAWLGY 789
+G+LLLAPWE+YFL +KDL + + +P ++ Q + + + K++ KE AY AWLGY
Sbjct: 483 QGLLLLAPWEKYFLSSIKDLSISEATVPSVDSSTQTIVKDAVRKVEMRSKECAYQAWLGY 542
Query: 790 YNSIREIGRDKTTLVELANKFAQSIGLQRPPPLFRKTALKMGLKDIPGIR 839
YNS + IGR+K+ LV+LA +F+QS+ L PP + ++ KMGL ++PG+R
Sbjct: 543 YNSNKTIGREKSRLVKLAEEFSQSMELSVPPAIPKQILRKMGLNNVPGLR 592
>gi|224130528|ref|XP_002320859.1| predicted protein [Populus trichocarpa]
gi|222861632|gb|EEE99174.1| predicted protein [Populus trichocarpa]
Length = 446
Score = 531 bits (1369), Expect = e-148, Method: Compositional matrix adjust.
Identities = 254/446 (56%), Positives = 341/446 (76%), Gaps = 6/446 (1%)
Query: 402 MTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLVPPIYVLIL 461
MT VQ ATL ++GKD + KAKTGTGK++AFLLP+IE V+K+ Q PPI VL++
Sbjct: 1 MTVVQAATLPVIVKGKDVLAKAKTGTGKTVAFLLPSIEVVVKSPPLDRDQKRPPIIVLVI 60
Query: 462 CPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDH 521
CPTRELA+Q A EA LLK H IGV ++GG R +QR L+++PCQILVATPGRL DH
Sbjct: 61 CPTRELATQAATEANTLLKYHPSIGVQVVIGGVRIASEQRNLQANPCQILVATPGRLKDH 120
Query: 522 IENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQSLLFSATMPKEL-- 579
IEN +G + RLMG+K+LVLDEAD LLD+GFRKD+E I+ +P +RQ+L+FSAT+P+E+
Sbjct: 121 IENTAGFATRLMGVKVLVLDEADRLLDMGFRKDIEKIIAAIPEQRQTLMFSATVPEEVRQ 180
Query: 580 ----VLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILHHLLKEHILGTPDYKVI 635
LKR+H +I+TV G+ +T K++Q ++AP + F +L+ +LK+HI PDYKVI
Sbjct: 181 ICHAALKRDHEFINTVEEGTEDTHSKVRQMHVIAPLDKQFPLLYVILKDHIADDPDYKVI 240
Query: 636 VFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEFRASKRLILVTSDVSARGM 695
VFC+T VT L+ LL E+ +N+RE++SRK Q YR R+S EFR S+ LILVTSDVSARG+
Sbjct: 241 VFCTTARVTGLVAGLLGELNLNIREIHSRKAQTYRTRVSNEFRKSRGLILVTSDVSARGV 300
Query: 696 DYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLAPWEEYFLDDLKDLPLDKLQ 755
DYPDVT V+QVG+P REQYIHRLGRTGR+GKEGEG+LLLAPWEE+FL +KDLPL K
Sbjct: 301 DYPDVTLVLQVGLPASREQYIHRLGRTGRKGKEGEGILLLAPWEEFFLSTVKDLPLTKAP 360
Query: 756 LPHLNPEIQLQMDNHMAKIDNNVKEAAYHAWLGYYNSIREIGRDKTTLVELANKFAQSIG 815
+P ++P+ + +++ ++++D N K+AAY AWLGYYNS +++G DK LVELAN+F++S+G
Sbjct: 361 MPSIDPDTKKKVERALSQLDMNSKQAAYQAWLGYYNSQKKVGNDKYRLVELANEFSRSMG 420
Query: 816 LQRPPPLFRKTALKMGLKDIPGIRLR 841
L PP + + KMGL++IPG+R +
Sbjct: 421 LDTPPAIPKLVLGKMGLRNIPGLRTK 446
>gi|52077088|dbj|BAD46119.1| putative RNA helicase [Oryza sativa Japonica Group]
gi|53791928|dbj|BAD54190.1| putative RNA helicase [Oryza sativa Japonica Group]
Length = 562
Score = 531 bits (1367), Expect = e-148, Method: Compositional matrix adjust.
Identities = 285/553 (51%), Positives = 376/553 (67%), Gaps = 34/553 (6%)
Query: 292 SDDDSDIDSEDVDEKVEGWRD--VKKMGSSASLGKYDMKITKRVPLKSLEDEHDFEEQVE 349
S+DDS++ D D+ G+ D G +L + K P +S++ E +E V
Sbjct: 7 SEDDSELGEVDEDDGPSGFEDDLFDDEGGEKNLVESPAK--NSAPFESIKGEPIDQEGVV 64
Query: 350 LIRKEISKNKLNGNGEKKEKREEEPILSQKRFDECGISPLTIKALTAAGYIQMTRVQEAT 409
R+ +G G+ LSQ RFDEC +SPLT+K + AAGY +MT VQEAT
Sbjct: 65 HTRE-------SGGGDS--------YLSQTRFDECSLSPLTLKGVKAAGYERMTAVQEAT 109
Query: 410 LSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELAS 469
L L+GKD + KAKTGTGK++AFLLPAIE V K + PPI V+++CPTRELA
Sbjct: 110 LPIILKGKDVLAKAKTGTGKTVAFLLPAIEVVSKLPPIDCDKKRPPISVVVVCPTRELAD 169
Query: 470 QIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLS 529
Q AAEA LLK H IGV ++GGTR ++Q+R+ ++PCQILVATPGRL DH+EN G +
Sbjct: 170 QAAAEANKLLKFHPSIGVQLVIGGTRMALEQKRMHTNPCQILVATPGRLKDHMENTPGFA 229
Query: 530 VRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQSLLFSATMPKE------LVLKR 583
RLMG+K+L+LDEAD LLD+GFR D+E IV LP++RQ+LLFSAT+P E + +KR
Sbjct: 230 TRLMGVKVLILDEADRLLDMGFRTDIERIVAALPKQRQTLLFSATVPDEVRQVCHIAMKR 289
Query: 584 EHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMV 643
+ +++TV GS ET ++KQ +VAP + F IL+ LL +HI DYK V
Sbjct: 290 DLEFVNTVEEGSEETHSQVKQMHVVAPLDKQFSILYGLLTDHISENVDYK---------V 340
Query: 644 TSLLYLLLREMKMNVREMYSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSV 703
TSL+ LL E+K+NVRE++SRKPQ YR RIS+EF+ SK LILV+SDVSARG+DYP+VT V
Sbjct: 341 TSLVAELLSELKLNVREIHSRKPQSYRTRISKEFKESKGLILVSSDVSARGVDYPNVTLV 400
Query: 704 VQVGIPPDREQYIHRLGRTGREGKEGEGVLLLAPWEEYFLDDLKDLPLDKLQLPHLNPEI 763
VQ+G+P DREQYIHRLGRTGR G EG G+LLLAPWEEYFL +KDLP+ + LP ++ +
Sbjct: 401 VQMGVPTDREQYIHRLGRTGRRGNEGSGILLLAPWEEYFLRSIKDLPITEATLPLIDLDT 460
Query: 764 QLQMDNHMAKIDNNVKEAAYHAWLGYYNSIREIGRDKTTLVELANKFAQSIGLQRPPPLF 823
+ +++ +A ++ KE AY AWLGYYNS + IGRDK LV LAN+F++S+GL PP +
Sbjct: 461 KRKVEKALAHVEVKDKELAYQAWLGYYNSNKFIGRDKYQLVSLANEFSRSLGLNNPPAVP 520
Query: 824 RKTALKMGLKDIP 836
+ KMGL +IP
Sbjct: 521 KLVLRKMGLNNIP 533
>gi|226497588|ref|NP_001145834.1| uncharacterized protein LOC100279341 [Zea mays]
gi|219884609|gb|ACL52679.1| unknown [Zea mays]
gi|414881421|tpg|DAA58552.1| TPA: putative DEAD-box ATP-dependent RNA helicase family protein
[Zea mays]
Length = 560
Score = 527 bits (1358), Expect = e-147, Method: Compositional matrix adjust.
Identities = 259/498 (52%), Positives = 360/498 (72%), Gaps = 18/498 (3%)
Query: 354 EISKNKLNGNGEKKEKREEEPI------LSQKRFDECGISPLTIKALTAAGYIQMTRVQE 407
E + + G+ K ++ E + L++ RFD+C ISPL++KA+ AGY +MTRVQE
Sbjct: 67 EQGADGMEGSASKTDRSVHEAVGVDGTYLTETRFDQCAISPLSLKAIKDAGYERMTRVQE 126
Query: 408 ATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLVPPIYVLILCPTREL 467
ATL L+GKD + KAKTGTGK++AFLLPAIE VL A ST+ I +L++CPTREL
Sbjct: 127 ATLPIILQGKDVLAKAKTGTGKTVAFLLPAIE-VLSALPRSTS-----INLLVMCPTREL 180
Query: 468 ASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSG 527
A+Q+AAEA LLK H +GV ++GGTR +QR ++++PCQILVATPGRL DH+EN G
Sbjct: 181 ANQLAAEARKLLKYHRSLGVQVVIGGTRLPQEQRSMQANPCQILVATPGRLKDHLENTPG 240
Query: 528 LSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQSLLFSATMPKE------LVL 581
S R+ G+K+LVLDEAD LLD+GFR+D+E I+ +P+ RQ+LLFSAT+ +E L +
Sbjct: 241 FSTRIRGVKVLVLDEADRLLDMGFRRDIEKIITFIPKDRQTLLFSATVSEEIHQISHLAM 300
Query: 582 KREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTG 641
++++ +I+ V G ET ++ Q+ +VAP LH IL+ +LK+H+ +YKVIVFC+T
Sbjct: 301 RKDYDFINAVQEGDEETHAQVNQTYMVAPLGLHLPILYDVLKKHVAEDAEYKVIVFCTTA 360
Query: 642 MVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVT 701
MVT L+ +L ++K+N+RE++SRK Q R ++S+EFR SK LILV+SDVSARG+DYPDVT
Sbjct: 361 MVTRLVAEVLSQLKLNIREIHSRKTQSARTKVSDEFRKSKGLILVSSDVSARGVDYPDVT 420
Query: 702 SVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLAPWEEYFLDDLKDLPLDKLQLPHLNP 761
V+QVG+P DREQYIHRLGRTGR+GKEG+G+LLLAPWE +FL + DL + + P ++
Sbjct: 421 LVMQVGLPADREQYIHRLGRTGRKGKEGQGILLLAPWEMHFLSTVNDLSISEAATPSVDS 480
Query: 762 EIQLQMDNHMAKIDNNVKEAAYHAWLGYYNSIREIGRDKTTLVELANKFAQSIGLQRPPP 821
IQ + + + +++ KE+AY AWLGYYNS + RDK LV LA +F+QSIGL PP
Sbjct: 481 SIQAAVKDAVRRVEMKSKESAYQAWLGYYNSHKATNRDKARLVMLAEEFSQSIGLAVPPA 540
Query: 822 LFRKTALKMGLKDIPGIR 839
+ ++ KMGL ++PG+R
Sbjct: 541 IPKQILRKMGLSNVPGLR 558
>gi|357135550|ref|XP_003569372.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 25-like
[Brachypodium distachyon]
Length = 587
Score = 523 bits (1346), Expect = e-145, Method: Compositional matrix adjust.
Identities = 253/470 (53%), Positives = 348/470 (74%), Gaps = 6/470 (1%)
Query: 376 LSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLL 435
LS+ RFD+ ISPL++K + AGY +MT+VQ ATL L+GKD + KAKTGTGK++AFLL
Sbjct: 116 LSETRFDQSAISPLSLKGVKDAGYGRMTQVQAATLPVILQGKDVLAKAKTGTGKTVAFLL 175
Query: 436 PAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTR 495
PAIE + K SS +QL I +L++CPTRELA+Q+A EA LLK H +GV ++GGTR
Sbjct: 176 PAIEVLSKLPSSQRSQLRSSINLLVMCPTRELANQVAVEAKKLLKYHRSLGVQVVIGGTR 235
Query: 496 FKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDV 555
+QR ++++PCQILVATPGRL DH+EN G S RL G+K+LVLDEAD LLD+GFR+D+
Sbjct: 236 ITQEQRNMQANPCQILVATPGRLKDHLENTPGFSTRLKGVKVLVLDEADRLLDMGFRRDI 295
Query: 556 ENIVDCLPRRRQSLLFSATMPKEL------VLKREHTYIDTVGLGSVETPVKIKQSCLVA 609
E I+ P RQ+LLFSAT+P+E+ +K+++ +I+TV G ET ++ Q +VA
Sbjct: 296 EKIMAATPSDRQTLLFSATVPEEVRQISHVAMKKDYKFINTVKEGDEETHSQVSQMYMVA 355
Query: 610 PHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLY 669
P +LHF IL+ +LK+H+ +YKVI+FC+T MVT L+ +L ++K+N+RE++SRK Q
Sbjct: 356 PLDLHFSILYDVLKKHVAEDAEYKVIIFCTTAMVTKLVAEVLSQLKLNIREIHSRKSQSA 415
Query: 670 RDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEG 729
R ++S+EFR S+ +ILV+SDVSARG+DYPDVT V+QVGIP REQYIHR+GRTGR+GKEG
Sbjct: 416 RTKVSDEFRRSRGVILVSSDVSARGVDYPDVTLVIQVGIPAGREQYIHRIGRTGRKGKEG 475
Query: 730 EGVLLLAPWEEYFLDDLKDLPLDKLQLPHLNPEIQLQMDNHMAKIDNNVKEAAYHAWLGY 789
+G+LLLAPWE +FL +KDL + + P +NP IQ ++ + +++ KE+AY AWLGY
Sbjct: 476 QGLLLLAPWESHFLTSVKDLSVSEAVTPSVNPSIQTEVKGALRRVEMKTKESAYQAWLGY 535
Query: 790 YNSIREIGRDKTTLVELANKFAQSIGLQRPPPLFRKTALKMGLKDIPGIR 839
YNS + IG +K+ LV LA +F+QS+GL PP + + KMGL +PG R
Sbjct: 536 YNSNKTIGGNKSRLVNLAEEFSQSMGLAVPPAIPKLILRKMGLGKVPGFR 585
>gi|115438623|ref|NP_001043591.1| Os01g0618500 [Oryza sativa Japonica Group]
gi|122228652|sp|Q0JL73.1|RH26_ORYSJ RecName: Full=DEAD-box ATP-dependent RNA helicase 26
gi|113533122|dbj|BAF05505.1| Os01g0618500 [Oryza sativa Japonica Group]
gi|222618866|gb|EEE54998.1| hypothetical protein OsJ_02629 [Oryza sativa Japonica Group]
Length = 536
Score = 523 bits (1346), Expect = e-145, Method: Compositional matrix adjust.
Identities = 257/470 (54%), Positives = 354/470 (75%), Gaps = 12/470 (2%)
Query: 376 LSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLL 435
LS+ RFD+C +SPL++KA+ AGY +MT+VQEATL L+G+D + KAKTGTGK++AFLL
Sbjct: 71 LSETRFDQCPVSPLSLKAIKDAGYEKMTQVQEATLPIILQGEDVLAKAKTGTGKTVAFLL 130
Query: 436 PAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTR 495
PAIE + ST P I +L++CPTRELA+Q+AAEA LLK H +GV ++GGT+
Sbjct: 131 PAIELL------STLPRSPSINLLVICPTRELANQVAAEARKLLKYHRSLGVQVVIGGTK 184
Query: 496 FKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDV 555
+QR ++S+PCQILVATPGRL DH+EN G S R+ G+K+LVLDEAD LLD+GFR+D+
Sbjct: 185 LPQEQRSMQSNPCQILVATPGRLKDHLENTPGFSNRIKGVKVLVLDEADRLLDMGFRRDI 244
Query: 556 ENIVDCLPRRRQSLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSCLVA 609
E I+ +P+ RQ+LLFSAT+P+E + +KR + +I+TV G ET ++ Q +VA
Sbjct: 245 EKIIAFIPKERQTLLFSATVPEEVRQISHIAMKRGYKFINTVKEGDEETHSQVSQMYMVA 304
Query: 610 PHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLY 669
P +LHF IL+++LK+HI DYKVIVFC+T MVT L+ +L ++K+N+RE++SRK Q
Sbjct: 305 PLDLHFSILYNVLKKHIAEDADYKVIVFCTTAMVTKLVAEVLSQLKLNIREIHSRKSQSA 364
Query: 670 RDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEG 729
R ++S+EFR SK LILV+SDVSARG+DYPDVT V+QVG+P DREQYIHRLGRTGR+GK+G
Sbjct: 365 RTKVSDEFRKSKGLILVSSDVSARGVDYPDVTLVIQVGLPADREQYIHRLGRTGRKGKDG 424
Query: 730 EGVLLLAPWEEYFLDDLKDLPLDKLQLPHLNPEIQLQMDNHMAKIDNNVKEAAYHAWLGY 789
G+LLLAPWE YFL+ ++DL + + +P ++ IQ + + + +++ KE+AY AWLGY
Sbjct: 425 LGLLLLAPWETYFLNSVQDLSVSQAVVPTIDSSIQTGVKDALGRVETKSKESAYQAWLGY 484
Query: 790 YNSIREIGRDKTTLVELANKFAQSIGLQRPPPLFRKTALKMGLKDIPGIR 839
YNS + I RDK+ LV LA +F+QS+GL PP + + KMGL ++PG+R
Sbjct: 485 YNSNKAISRDKSRLVRLAEEFSQSMGLAIPPAIPKLILRKMGLNNVPGLR 534
>gi|54290855|dbj|BAD61516.1| myc-regulated DEAD/H box 18 RNA helicase-like [Oryza sativa
Japonica Group]
Length = 535
Score = 523 bits (1346), Expect = e-145, Method: Compositional matrix adjust.
Identities = 257/470 (54%), Positives = 354/470 (75%), Gaps = 12/470 (2%)
Query: 376 LSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLL 435
LS+ RFD+C +SPL++KA+ AGY +MT+VQEATL L+G+D + KAKTGTGK++AFLL
Sbjct: 70 LSETRFDQCPVSPLSLKAIKDAGYEKMTQVQEATLPIILQGEDVLAKAKTGTGKTVAFLL 129
Query: 436 PAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTR 495
PAIE + ST P I +L++CPTRELA+Q+AAEA LLK H +GV ++GGT+
Sbjct: 130 PAIELL------STLPRSPSINLLVICPTRELANQVAAEARKLLKYHRSLGVQVVIGGTK 183
Query: 496 FKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDV 555
+QR ++S+PCQILVATPGRL DH+EN G S R+ G+K+LVLDEAD LLD+GFR+D+
Sbjct: 184 LPQEQRSMQSNPCQILVATPGRLKDHLENTPGFSNRIKGVKVLVLDEADRLLDMGFRRDI 243
Query: 556 ENIVDCLPRRRQSLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSCLVA 609
E I+ +P+ RQ+LLFSAT+P+E + +KR + +I+TV G ET ++ Q +VA
Sbjct: 244 EKIIAFIPKERQTLLFSATVPEEVRQISHIAMKRGYKFINTVKEGDEETHSQVSQMYMVA 303
Query: 610 PHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLY 669
P +LHF IL+++LK+HI DYKVIVFC+T MVT L+ +L ++K+N+RE++SRK Q
Sbjct: 304 PLDLHFSILYNVLKKHIAEDADYKVIVFCTTAMVTKLVAEVLSQLKLNIREIHSRKSQSA 363
Query: 670 RDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEG 729
R ++S+EFR SK LILV+SDVSARG+DYPDVT V+QVG+P DREQYIHRLGRTGR+GK+G
Sbjct: 364 RTKVSDEFRKSKGLILVSSDVSARGVDYPDVTLVIQVGLPADREQYIHRLGRTGRKGKDG 423
Query: 730 EGVLLLAPWEEYFLDDLKDLPLDKLQLPHLNPEIQLQMDNHMAKIDNNVKEAAYHAWLGY 789
G+LLLAPWE YFL+ ++DL + + +P ++ IQ + + + +++ KE+AY AWLGY
Sbjct: 424 LGLLLLAPWETYFLNSVQDLSVSQAVVPTIDSSIQTGVKDALGRVETKSKESAYQAWLGY 483
Query: 790 YNSIREIGRDKTTLVELANKFAQSIGLQRPPPLFRKTALKMGLKDIPGIR 839
YNS + I RDK+ LV LA +F+QS+GL PP + + KMGL ++PG+R
Sbjct: 484 YNSNKAISRDKSRLVRLAEEFSQSMGLAIPPAIPKLILRKMGLNNVPGLR 533
>gi|218188674|gb|EEC71101.1| hypothetical protein OsI_02885 [Oryza sativa Indica Group]
Length = 536
Score = 519 bits (1336), Expect = e-144, Method: Compositional matrix adjust.
Identities = 256/470 (54%), Positives = 353/470 (75%), Gaps = 12/470 (2%)
Query: 376 LSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLL 435
LS+ RFD+C +SPL++KA+ AGY +MT+VQEATL L+G+D + KAKTGTGK++AFLL
Sbjct: 71 LSETRFDQCPVSPLSLKAIKDAGYEKMTQVQEATLPIILQGEDVLAKAKTGTGKTVAFLL 130
Query: 436 PAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTR 495
PAIE + ST P I +L++CPTRELA+Q+AAEA LLK H +GV ++GGT+
Sbjct: 131 PAIELL------STLPRSPSINLLVICPTRELANQVAAEARKLLKYHRSLGVQVVIGGTK 184
Query: 496 FKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDV 555
+QR ++S+PCQILVATPGRL DH+EN G R+ G+K+LVLDEAD LLD+GFR+D+
Sbjct: 185 LPQEQRSMQSNPCQILVATPGRLKDHLENTPGFPNRIKGVKVLVLDEADRLLDMGFRRDI 244
Query: 556 ENIVDCLPRRRQSLLFSATMPKEL------VLKREHTYIDTVGLGSVETPVKIKQSCLVA 609
E I+ +P+ RQ+LLFSAT+P+E+ +KR + +I+TV G ET ++ Q +VA
Sbjct: 245 EKIIAFIPKERQTLLFSATVPEEVRQISHVAMKRGYKFINTVKEGDEETHSQVSQMYMVA 304
Query: 610 PHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLY 669
P +LHF IL+++LK+HI DYKVIVFC+T MVT L+ +L ++K+N+RE++SRK Q
Sbjct: 305 PLDLHFSILYNVLKKHITEDADYKVIVFCTTAMVTKLVAEVLFQLKLNIREIHSRKSQSA 364
Query: 670 RDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEG 729
R ++S+EFR SK LILV+SDVSARG+DYPDVT V+QVG+P DREQYIHRLGRTGR+GK+G
Sbjct: 365 RTKVSDEFRKSKGLILVSSDVSARGVDYPDVTLVIQVGLPADREQYIHRLGRTGRKGKDG 424
Query: 730 EGVLLLAPWEEYFLDDLKDLPLDKLQLPHLNPEIQLQMDNHMAKIDNNVKEAAYHAWLGY 789
G+LLLAPWE YFL+ ++DL + + +P ++ IQ + + + +++ KE+AY AWLGY
Sbjct: 425 LGLLLLAPWETYFLNSVQDLSVSQAVVPTIDSSIQTGVKDALGRVETKSKESAYQAWLGY 484
Query: 790 YNSIREIGRDKTTLVELANKFAQSIGLQRPPPLFRKTALKMGLKDIPGIR 839
YNS + I RDK+ LV LA +F+QS+GL PP + + KMGL ++PG+R
Sbjct: 485 YNSNKAISRDKSRLVRLAEEFSQSMGLAIPPAIPKLILRKMGLNNVPGLR 534
>gi|357130508|ref|XP_003566890.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 25-like
[Brachypodium distachyon]
Length = 540
Score = 508 bits (1309), Expect = e-141, Method: Compositional matrix adjust.
Identities = 243/470 (51%), Positives = 345/470 (73%), Gaps = 12/470 (2%)
Query: 376 LSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLL 435
LS RFD+C +SPL++K + AGY ++TRVQEATL L+GKD + KAKTGTGK++AFLL
Sbjct: 75 LSDTRFDQCNVSPLSLKGIHDAGYERLTRVQEATLPVILQGKDVLAKAKTGTGKTVAFLL 134
Query: 436 PAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTR 495
PAIE + K S++ L L++ PTRELA+Q+A EA LLK H + V ++GGTR
Sbjct: 135 PAIELLSKLPRSTSINL------LVMLPTRELANQVAVEARKLLKYHSTLDVQVVIGGTR 188
Query: 496 FKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDV 555
+QR ++S PCQILVATPGRL+DH++N G + R+ G+K+LVLDEAD LLD+GFR+D+
Sbjct: 189 LPQEQRSMKSSPCQILVATPGRLIDHLDNTPGFATRIKGVKVLVLDEADRLLDMGFRRDI 248
Query: 556 ENIVDCLPRRRQSLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSCLVA 609
E I+ +P+ RQ+LLFSAT+P E L +++++ +I+TV G ET ++ Q +VA
Sbjct: 249 EKIISFIPKGRQTLLFSATVPAEVRQISNLAMQKDYKFINTVQEGDEETHSQVNQMYMVA 308
Query: 610 PHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLY 669
++HF IL+ LLK+H +YKVI+FC+T T L+ +L ++K+N+R+++SR Q
Sbjct: 309 SLDMHFSILYDLLKKHAAEDVEYKVIIFCTTAKFTKLVAEVLSQLKLNIRQIHSRISQSA 368
Query: 670 RDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEG 729
R ++S+EFR SK LILV+SDVSARG+DYPDV+ V+QVG+P DR+QYIHRLGRTGR+GKEG
Sbjct: 369 RTKVSDEFRKSKGLILVSSDVSARGVDYPDVSLVIQVGLPSDRQQYIHRLGRTGRKGKEG 428
Query: 730 EGVLLLAPWEEYFLDDLKDLPLDKLQLPHLNPEIQLQMDNHMAKIDNNVKEAAYHAWLGY 789
+G+LLLAPWE++FL+ + DL + + P +NP IQ ++ + K+D + KE+AY AWLGY
Sbjct: 429 QGILLLAPWEKHFLNSVNDLSILEAVAPSVNPSIQAEVKGAVRKVDMSSKESAYQAWLGY 488
Query: 790 YNSIREIGRDKTTLVELANKFAQSIGLQRPPPLFRKTALKMGLKDIPGIR 839
YNS + + RDK LV+LA +F+QS+GL+ PP + + KMGL ++ G+R
Sbjct: 489 YNSNKTVNRDKPRLVKLAEEFSQSMGLEVPPAIPKLILRKMGLLNVAGLR 538
>gi|413954169|gb|AFW86818.1| putative DEAD-box ATP-dependent RNA helicase family protein [Zea
mays]
Length = 854
Score = 474 bits (1221), Expect = e-131, Method: Compositional matrix adjust.
Identities = 241/436 (55%), Positives = 312/436 (71%), Gaps = 13/436 (2%)
Query: 338 LEDEHDFEEQVELIRKEISKNKL-------NGNGEKKEKREEEPILSQKRFDECGISPLT 390
EDE D E+ +I + + L N + + + + LSQKRFDEC +SPL+
Sbjct: 408 FEDEGDKEDVGHIIGNKSGSSMLPEDEPAKNESVQGRSAGGGDSYLSQKRFDECPLSPLS 467
Query: 391 IKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTT 450
+K + AAGY +MT VQEATL L+GKD + KAKTGTGK++AFLLPAIE V K
Sbjct: 468 LKGVKAAGYERMTAVQEATLPIILQGKDVLAKAKTGTGKTVAFLLPAIEVVSKLPPVDRD 527
Query: 451 QLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQI 510
PPI V+++CPTRELA Q AAEA LLK H IGV ++GGTR ++Q+R+ ++PCQI
Sbjct: 528 LKKPPISVVVVCPTRELADQAAAEANKLLKFHPSIGVQLVIGGTRMALEQKRMHTNPCQI 587
Query: 511 LVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQSLL 570
LVATPGRL DH+EN G + RL+G+K+L+LDEAD LLD+GFR D+E IV LP++RQ+LL
Sbjct: 588 LVATPGRLRDHMENTPGFATRLLGVKVLILDEADRLLDMGFRSDIEKIVAALPKQRQTLL 647
Query: 571 FSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILHHLLKE 624
FSAT+P E + +KR+ +++TV GS ET ++KQ L+AP + F L+ LL +
Sbjct: 648 FSATVPDEVRQVCHIAMKRDLEFVNTVQEGSEETHSQVKQMHLIAPLDKQFSNLYGLLTD 707
Query: 625 HILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEFRASKRLI 684
HI DYKVIVFC+T VTSL+ LL E+K+NVRE++SRKPQ YR RIS+EF+ SK LI
Sbjct: 708 HISENVDYKVIVFCTTAKVTSLVAELLSELKLNVREIHSRKPQSYRTRISKEFKESKGLI 767
Query: 685 LVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLAPWEEYFLD 744
LV+SDVSARG+DYP+VT VVQ+G+P DREQYIHRLGRTGR G EG G+LLLAPWEEYFL
Sbjct: 768 LVSSDVSARGVDYPNVTLVVQLGVPTDREQYIHRLGRTGRRGNEGTGILLLAPWEEYFLR 827
Query: 745 DLKDLPLDKLQLPHLN 760
+ DLP+ + P ++
Sbjct: 828 SINDLPITEATQPLID 843
>gi|168051595|ref|XP_001778239.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162670336|gb|EDQ56906.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 480
Score = 468 bits (1203), Expect = e-129, Method: Compositional matrix adjust.
Identities = 238/472 (50%), Positives = 321/472 (68%), Gaps = 10/472 (2%)
Query: 375 ILSQKRFDECGISPLTIKAL-TAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAF 433
+L RFD ISPL++KAL AG+ MT VQ TL L+G D + +AKTGTGK++AF
Sbjct: 8 VLVCDRFDNFKISPLSLKALHEVAGFDTMTVVQNETLPVILKGTDVLARAKTGTGKTVAF 67
Query: 434 LLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGG 493
LLPAIE++L+ S + I VL +CPTRELA+Q+AAEA L H +GV ++GG
Sbjct: 68 LLPAIESILREGSRKVKR--NSINVLAICPTRELATQVAAEAKMLTTFHRDLGVQVVIGG 125
Query: 494 TRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRK 553
T + RL+ PCQILV TPGRLLDHI++ + +L LK+L+LDEAD LLD+GFRK
Sbjct: 126 TNMATESARLQRSPCQILVGTPGRLLDHIQSDRAVRSQLEDLKVLILDEADQLLDMGFRK 185
Query: 554 DVENIVDCLPRRRQSLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSCL 607
+ I+ LP RQ+LLFSAT+P E + LK+ +TYIDTVG +VET +K++Q L
Sbjct: 186 SLNGIIKALPTERQTLLFSATVPNEVKSMCEIALKKGYTYIDTVGEDNVETHMKVQQEYL 245
Query: 608 VAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQ 667
+ P E IL+ LLKEH + PD+KV+VFC++ T+L +++ MN E++SRK Q
Sbjct: 246 LVPLEKQLSILYALLKEHAVEDPDFKVLVFCTSAKCTALFAEFYKKLGMNTLEIHSRKSQ 305
Query: 668 LYRDRISEEFRAS-KRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREG 726
+R + S EFR +I+ TSDVSARG+DYPDVT VVQVG P REQYIHRLGRTGR G
Sbjct: 306 SFRTKASNEFRNHPGGVIMFTSDVSARGVDYPDVTFVVQVGTPASREQYIHRLGRTGRAG 365
Query: 727 KEGEGVLLLAPWEEYFLDDLKDLPLDKLQLPHLNPEIQLQMDNHMAKIDNNVKEAAYHAW 786
KEG G+LLL PWEE FL L D+ + + + ++P+I+ +++ + ID + K AY AW
Sbjct: 366 KEGRGLLLLTPWEEVFLRSLNDITITQSKGTEVSPDIEAKVNKALGYIDEDTKSKAYQAW 425
Query: 787 LGYYNSIREIGRDKTTLVELANKFAQSIGLQRPPPLFRKTALKMGLKDIPGI 838
LGYYNS R + DK TLV+ AN F+ ++GL++PP L +KT MGL+++PG+
Sbjct: 426 LGYYNSCRLLKWDKQTLVKRANLFSSTLGLRQPPALLKKTVGMMGLRNVPGL 477
>gi|356511504|ref|XP_003524465.1| PREDICTED: putative DEAD-box ATP-dependent RNA helicase 33-like
[Glycine max]
Length = 524
Score = 461 bits (1187), Expect = e-127, Method: Compositional matrix adjust.
Identities = 236/352 (67%), Positives = 275/352 (78%), Gaps = 28/352 (7%)
Query: 313 VKKMGSSASLGKYDMKITKRVPLKSLEDEHDFEEQVELIRKEISKNKLNGN--------- 363
+KK GSSASLG+YD+K +RV K+ + E I E++K KL+
Sbjct: 179 MKKRGSSASLGEYDVKRERRVVPKT-------SPEFEFISYELNKRKLSQIEDQQSEQQQ 231
Query: 364 ------GEKKEKREEEPILSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGK 417
+ K +P L + DECGISPLT+KAL++AGY+ MTR++EA+L CLEG
Sbjct: 232 SNESILSNTRLKWLMQPQLCLQSLDECGISPLTVKALSSAGYVHMTRIREASLPICLEGM 291
Query: 418 DAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIA 477
DAVVKAKTGTGK++AFLLPAIE VLKA SS+T+Q VPPIYVLILCPTRELA+Q+AA A
Sbjct: 292 DAVVKAKTGTGKNVAFLLPAIETVLKAMSSNTSQRVPPIYVLILCPTRELANQVAAVAKV 351
Query: 478 LLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKM 537
LLK HD I V TLVGG RFKVDQ+RLESDPCQILVATPGRLLDHIENKSG+S+RLMGL+
Sbjct: 352 LLKYHDAIRVQTLVGGIRFKVDQKRLESDPCQILVATPGRLLDHIENKSGISLRLMGLRT 411
Query: 538 LVLDEADHLLDLGFRKDVENIVDCLPRRRQSLLFSATMPKE------LVLKREHTYIDTV 591
LVLDEADHLLDLGFRKDVE IVDCLPR++QSLLFSAT+PKE LVLKREH Y+DTV
Sbjct: 412 LVLDEADHLLDLGFRKDVEKIVDCLPRQQQSLLFSATIPKEVRCVSQLVLKREHKYVDTV 471
Query: 592 GLGSVETPVKIKQSCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMV 643
G+G VETPVK+KQS L+APHE HFQ++HH+LKEHIL TPDYKVIVFC TGMV
Sbjct: 472 GMGCVETPVKVKQSYLIAPHESHFQLVHHILKEHILQTPDYKVIVFCITGMV 523
Score = 146 bits (369), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 66/108 (61%), Positives = 84/108 (77%), Gaps = 7/108 (6%)
Query: 19 FNRVFARPMGGGPRTFPGGLNKWQWKRMHEKKAKEKEKRLLEQEKQLYQARVRSQIRTKL 78
+N V R MGGGPRTFPGG+NKW+WKRMHEK A++K+ RL++QEKQLY AR+RS IR+ L
Sbjct: 16 WNWVSLRSMGGGPRTFPGGVNKWKWKRMHEKLARDKQNRLIQQEKQLYPARIRSHIRSSL 75
Query: 79 FDKADPD---SETNQHKPMSPDEHVKALADRFMKEGAEDLWNEDDGPV 123
PD + H+P+SP++H KALADRF+K+GAEDLWN DGP+
Sbjct: 76 ----SPDHRSAAAATHRPLSPNDHFKALADRFVKDGAEDLWNNHDGPL 119
>gi|242053635|ref|XP_002455963.1| hypothetical protein SORBIDRAFT_03g028100 [Sorghum bicolor]
gi|241927938|gb|EES01083.1| hypothetical protein SORBIDRAFT_03g028100 [Sorghum bicolor]
Length = 500
Score = 461 bits (1186), Expect = e-127, Method: Compositional matrix adjust.
Identities = 223/395 (56%), Positives = 303/395 (76%), Gaps = 12/395 (3%)
Query: 376 LSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLL 435
L++ RFD+C ISPL++KA+ AGY +MT+VQEATL L+GKD + KAKTGTGK++AFLL
Sbjct: 96 LTETRFDQCAISPLSLKAIKDAGYERMTQVQEATLPIILQGKDVLAKAKTGTGKTVAFLL 155
Query: 436 PAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTR 495
PAIE VL A ST+ I +L++CPTRELA+Q+AAEA LLK H +GV ++GGTR
Sbjct: 156 PAIE-VLSALPRSTS-----INLLVMCPTRELANQVAAEARKLLKYHRSLGVQVVIGGTR 209
Query: 496 FKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDV 555
+QR ++++PCQILVATPGRL DH+EN G S R+ G+K+LVLDEAD LLD+GFR+D+
Sbjct: 210 LPQEQRSMQANPCQILVATPGRLKDHLENTPGFSTRIKGVKVLVLDEADRLLDMGFRRDI 269
Query: 556 ENIVDCLPRRRQSLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSCLVA 609
E I+ +P+ RQ+LLFSAT+ +E L +KR++ +I+TV G ET ++ Q+ ++A
Sbjct: 270 EKIISFIPKERQTLLFSATVSEEVRQISHLAMKRDYNFINTVQEGDEETHAQVNQTYMIA 329
Query: 610 PHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLY 669
P +LHF IL+ +LK+H+ +YKVIVFC+T MVT L+ +L ++K+N+RE++SRK Q
Sbjct: 330 PLDLHFPILYDVLKKHVAEDAEYKVIVFCTTAMVTKLVAEVLSQLKLNIREIHSRKSQSA 389
Query: 670 RDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEG 729
R ++S+EFR SK LILV+SDVSARG+DYPDVT V+QVG+P DREQYIHRLGRTGR+GKEG
Sbjct: 390 RTKVSDEFRKSKGLILVSSDVSARGVDYPDVTLVMQVGLPADREQYIHRLGRTGRKGKEG 449
Query: 730 EGVLLLAPWEEYFLDDLKDLPLDKLQLPHLNPEIQ 764
+G+LLLAPWE +FL + DL + + P ++ IQ
Sbjct: 450 QGILLLAPWEMHFLSIVNDLSISEAATPSIDSSIQ 484
>gi|242095998|ref|XP_002438489.1| hypothetical protein SORBIDRAFT_10g020525 [Sorghum bicolor]
gi|241916712|gb|EER89856.1| hypothetical protein SORBIDRAFT_10g020525 [Sorghum bicolor]
Length = 896
Score = 461 bits (1185), Expect = e-127, Method: Compositional matrix adjust.
Identities = 233/427 (54%), Positives = 301/427 (70%), Gaps = 28/427 (6%)
Query: 416 GKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEA 475
GKD + KAKTGTGK++AFLLPAIE V K PPI V+++CPTRELA Q AAEA
Sbjct: 492 GKDVLAKAKTGTGKTVAFLLPAIEVVSKLPPVDRDLKRPPISVVVVCPTRELADQAAAEA 551
Query: 476 IALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGL 535
LLK H IGV ++GGTR ++Q+R+ ++PCQILVATPGRL DH+EN G + RLMG+
Sbjct: 552 NKLLKFHPSIGVQLVIGGTRMALEQKRMHTNPCQILVATPGRLRDHMENTPGFATRLMGV 611
Query: 536 KMLVLDEADHLLDLGFRKDVENIVDCLPRRRQSLLFSATMPKE------LVLKREHTYID 589
K+L+LDEAD LLD+GFR D+E IV LP++RQ+LLFSAT+P E + +KR+ +++
Sbjct: 612 KVLILDEADRLLDMGFRSDIEKIVAALPKQRQTLLFSATVPDEVRQVCHIAMKRDLEFVN 671
Query: 590 TVGLGSVETPVKIKQSCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYL 649
TV GS ET ++KQ L+AP + F IL+ LL +HI DYK
Sbjct: 672 TVQEGSEETHSQVKQMHLIAPLDKQFSILYGLLTDHISENVDYK---------------- 715
Query: 650 LLREMKMNVREMYSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIP 709
+NVRE++SRKPQ YR RIS+EF+ SK LILV+SDVSARG+DYP+VT VVQ+G+P
Sbjct: 716 ------LNVREIHSRKPQSYRTRISKEFKESKGLILVSSDVSARGVDYPNVTLVVQLGVP 769
Query: 710 PDREQYIHRLGRTGREGKEGEGVLLLAPWEEYFLDDLKDLPLDKLQLPHLNPEIQLQMDN 769
DREQYIHRLGRTGR G EG GVLLLAPWEEYFL +KDLP+ + P ++ + + ++D
Sbjct: 770 TDREQYIHRLGRTGRRGNEGAGVLLLAPWEEYFLRSIKDLPISEATQPLIDLDTKKKVDK 829
Query: 770 HMAKIDNNVKEAAYHAWLGYYNSIREIGRDKTTLVELANKFAQSIGLQRPPPLFRKTALK 829
+A ++ KE+AY AWLGYYNS + IGRDK LV LAN+F++S+GL PP + + K
Sbjct: 830 ALAHVEVKDKESAYQAWLGYYNSNKFIGRDKYQLVSLANEFSRSMGLNNPPAVPKLALRK 889
Query: 830 MGLKDIP 836
MGL +IP
Sbjct: 890 MGLNNIP 896
>gi|302791587|ref|XP_002977560.1| hypothetical protein SELMODRAFT_176291 [Selaginella moellendorffii]
gi|300154930|gb|EFJ21564.1| hypothetical protein SELMODRAFT_176291 [Selaginella moellendorffii]
Length = 440
Score = 436 bits (1122), Expect = e-119, Method: Compositional matrix adjust.
Identities = 220/441 (49%), Positives = 303/441 (68%), Gaps = 10/441 (2%)
Query: 402 MTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLVPPIYVLIL 461
MT VQEATL L+G+D + KAKTGTGK+IAFLLP IE +L A+ ++ T PI L++
Sbjct: 1 MTMVQEATLPLILKGEDVLAKAKTGTGKTIAFLLPTIETIL-ASKNAQTYHENPIRALVI 59
Query: 462 CPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDH 521
CPTRELA Q A EA L+K H+ +G T +GG ++ ++++ PCQILV TPGRLLDH
Sbjct: 60 CPTRELAMQAAVEAQTLMKFHNELGAQTAIGGNSSVMEAKKIKLQPCQILVGTPGRLLDH 119
Query: 522 IENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQSLLFSATMPKE--- 578
I+N G + +L +K+L+LDEAD LLD+GFR+++ I+ LP++RQ+LLFSAT+PKE
Sbjct: 120 IQNARGFADQLKSVKILILDEADTLLDMGFRQNLTEILKALPKKRQTLLFSATIPKEVHS 179
Query: 579 ---LVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILHHLLKEHILGTPDYKVI 635
L LK +H ++DTVG ET + Q V P E F +L+ +LKEHI P YKV+
Sbjct: 180 ISQLALKPDHKFVDTVG-QDTETHAMVNQKYAVVPQESQFAVLYSILKEHIAVEPKYKVL 238
Query: 636 VFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEFRASK-RLILVTSDVSARG 694
VFC+T +T+ + L +++ NVRE++SRK Q YR R+S+EFR K LI+ TSDVSARG
Sbjct: 239 VFCTTANITAYMAALYQKLGFNVREIHSRKTQTYRTRVSDEFRNCKGGLIMFTSDVSARG 298
Query: 695 MDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLAPWEEYFLDDLKDLPLDKL 754
+DYPDVT VVQ+G+P REQYIHRLGRTGR GKEG+GVL+L PWEE FL LKD+ + ++
Sbjct: 299 IDYPDVTLVVQIGVPAAREQYIHRLGRTGRAGKEGQGVLILLPWEEPFLRKLKDISIGRM 358
Query: 755 QLPHLNPEIQLQMDNHMAKIDNNVKEAAYHAWLGYYNSIREIGRDKTTLVELANKFAQSI 814
+ P + ++ ++ + ++ ID + AY +WLGYY + + + DK T+VE + K+ S+
Sbjct: 359 ETPKV-LDLSKKLRSVISDIDQTIGTRAYQSWLGYYTTAKSLSIDKHTVVEYSRKYWASL 417
Query: 815 GLQRPPPLFRKTALKMGLKDI 835
G P + R T KMGL I
Sbjct: 418 GFSSAPAIPRLTIKKMGLAGI 438
>gi|302786768|ref|XP_002975155.1| hypothetical protein SELMODRAFT_174634 [Selaginella moellendorffii]
gi|300157314|gb|EFJ23940.1| hypothetical protein SELMODRAFT_174634 [Selaginella moellendorffii]
Length = 440
Score = 436 bits (1120), Expect = e-119, Method: Compositional matrix adjust.
Identities = 219/441 (49%), Positives = 303/441 (68%), Gaps = 10/441 (2%)
Query: 402 MTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLVPPIYVLIL 461
MT VQEATL L+G+D + KAKTGTGK+IAFLLP IE +L A+ ++ T PI L++
Sbjct: 1 MTMVQEATLPLILKGEDVLAKAKTGTGKTIAFLLPTIETIL-ASKNAQTYHENPIRALVI 59
Query: 462 CPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDH 521
CPTRELA Q A EA L+K H+ +G T +GG ++ ++++ PCQILV TPGRLLDH
Sbjct: 60 CPTRELAMQAAVEAQTLMKFHNELGAQTAIGGNSSVMEAKKIKLQPCQILVGTPGRLLDH 119
Query: 522 IENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQSLLFSATMPKE--- 578
I+N G + +L +K+L+LDEAD LLD+GFR+++ I+ LP++RQ+LLFSAT+PKE
Sbjct: 120 IQNARGFADQLKSVKILILDEADTLLDMGFRQNLTEILKALPKKRQTLLFSATIPKEVHS 179
Query: 579 ---LVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILHHLLKEHILGTPDYKVI 635
L LK +H ++DTVG ET + Q V P E F +L+ +LKEHI P YKV+
Sbjct: 180 ISQLALKPDHKFVDTVG-QDTETHAMVNQKYAVVPQESQFAVLYSILKEHIAVEPKYKVL 238
Query: 636 VFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEFRASK-RLILVTSDVSARG 694
VFC+T +T+ + L +++ N+RE++SRK Q YR R+S+EFR K LI+ TSDVSARG
Sbjct: 239 VFCTTANITAYMAALYQKLGFNIREIHSRKTQTYRTRVSDEFRNCKGGLIMFTSDVSARG 298
Query: 695 MDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLAPWEEYFLDDLKDLPLDKL 754
+DYPDVT VVQ+G+P REQYIHRLGRTGR GKEG+GVL+L PWEE FL LKD+ + ++
Sbjct: 299 IDYPDVTLVVQIGVPAAREQYIHRLGRTGRAGKEGQGVLILLPWEEPFLRKLKDISIGRM 358
Query: 755 QLPHLNPEIQLQMDNHMAKIDNNVKEAAYHAWLGYYNSIREIGRDKTTLVELANKFAQSI 814
+ P + ++ ++ + ++ ID + AY +WLGYY + + + DK T+VE + K+ S+
Sbjct: 359 ETPKV-LDLSKKLRSVISDIDQTIGTRAYQSWLGYYTTAKSLSIDKHTVVEYSRKYWASL 417
Query: 815 GLQRPPPLFRKTALKMGLKDI 835
G P + R T KMGL I
Sbjct: 418 GFSSAPAIPRLTIKKMGLAGI 438
>gi|3776031|emb|CAA09216.1| RNA helicase [Arabidopsis thaliana]
Length = 295
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 181/291 (62%), Positives = 234/291 (80%), Gaps = 6/291 (2%)
Query: 459 LILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILVATPGRL 518
L++CPTRELA+Q A EA LLK H IGV ++GGTR ++Q+R++++PCQILVATPGRL
Sbjct: 3 LVICPTRELANQAATEANTLLKYHPSIGVQVVIGGTRLGLEQKRMQTNPCQILVATPGRL 62
Query: 519 LDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQSLLFSATMPKE 578
DHIEN G + RL G+K+LVLDEADHLLD+GFRKD+E I+ +P+ RQ+ LFSAT+P+E
Sbjct: 63 KDHIENTPGFATRLKGVKVLVLDEADHLLDMGFRKDIERIISAVPKERQTFLFSATVPEE 122
Query: 579 L------VLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILHHLLKEHILGTPDY 632
+ L+R+H +++ V G++ET +++Q ++A + HF +L+ LL+EHI+G DY
Sbjct: 123 VRQICLVALRRDHEFVNCVHEGTIETHQQVRQMHMIASLDRHFSLLYTLLREHIMGNVDY 182
Query: 633 KVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEFRASKRLILVTSDVSA 692
KVIVFC+T MVT L+ LL E+ +NVRE++SRKPQ YR R+S EFR SK LILVTSDVSA
Sbjct: 183 KVIVFCTTAMVTKLVADLLGELNLNVREIHSRKPQSYRTRVSNEFRKSKGLILVTSDVSA 242
Query: 693 RGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLAPWEEYFL 743
RG+DYPDVT V+QVG+P DREQYIHRLGRTGR+GKEGEG+LLLAPWEEYFL
Sbjct: 243 RGVDYPDVTLVLQVGLPKDREQYIHRLGRTGRKGKEGEGILLLAPWEEYFL 293
>gi|3776025|emb|CAA09213.1| RNA helicase [Arabidopsis thaliana]
Length = 595
Score = 369 bits (947), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 181/333 (54%), Positives = 242/333 (72%), Gaps = 7/333 (2%)
Query: 350 LIRKEISKNKLNGNGEKKEK-REEEPILSQKRFDECGISPLTIKALTAAGYIQMTRVQEA 408
LI+K S + + E + + LS+ RFD+ +SPL++KA+ AG+ MT VQEA
Sbjct: 263 LIKKAASAKAVQTDKPTGEHVKTSDSYLSKTRFDQFPLSPLSLKAIKDAGFETMTVVQEA 322
Query: 409 TLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELA 468
TL L+GKD + KAKTGTGK++AFLLPAIEAV+K+ +S PPI VL++CPTRELA
Sbjct: 323 TLPIILQGKDVLAKAKTGTGKTVAFLLPAIEAVIKSPPASRDSRQPPIIVLVVCPTRELA 382
Query: 469 SQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGL 528
SQ AAEA LLK H IGV ++GGT+ +QRR++++PCQILVATPGRL DHIEN SG
Sbjct: 383 SQAAAEANTLLKYHPSIGVQVVIGGTKLPTEQRRMQTNPCQILVATPGRLKDHIENTSGF 442
Query: 529 SVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQSLLFSATMPKE------LVLK 582
+ RLMG+K+LVLDEADHLLD+GFR+D+E I+ +P++RQ+ LFSAT+P+E + LK
Sbjct: 443 ATRLMGVKVLVLDEADHLLDMGFRRDIERIIAAVPKQRQTFLFSATVPEEVRQICHVALK 502
Query: 583 REHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGM 642
R+H +I+ V GS ET K+ Q ++A + HF +LH LLKEHI DYKVI+FC+T M
Sbjct: 503 RDHEFINCVQEGSGETHQKVTQMYMIASLDRHFSLLHVLLKEHIADNVDYKVIIFCTTAM 562
Query: 643 VTSLLYLLLREMKMNVREMYSRKPQLYRDRISE 675
VT L+ LL ++ +NVRE++SRKPQ YR R+S+
Sbjct: 563 VTRLVADLLSQLSLNVREIHSRKPQSYRTRVSD 595
>gi|307103390|gb|EFN51650.1| hypothetical protein CHLNCDRAFT_59143 [Chlorella variabilis]
Length = 600
Score = 362 bits (930), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 203/463 (43%), Positives = 277/463 (59%), Gaps = 63/463 (13%)
Query: 402 MTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLVPPIYVLIL 461
+T VQEATL A L G D + +AKTGTGK++AFL+PA+EA+ +A S + I VL+L
Sbjct: 93 LTSVQEATLPAVLNGGDVMARAKTGTGKTMAFLIPAVEALCRAPPRSGSG----ISVLVL 148
Query: 462 CPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDH 521
PTRELASQIA EA ALL+ H + GGT ++ RL C +LVATPGRL+DH
Sbjct: 149 SPTRELASQIAKEAEALLRFHP-YKAQVVYGGTNINSERNRLAGR-CDVLVATPGRLIDH 206
Query: 522 IENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQSLLFSATMPKE--- 578
+EN SGL+ L G++ LVLDEAD LL++GFR +E I+ LP+ RQ+LLFSATMP+
Sbjct: 207 LEN-SGLAATLQGIRTLVLDEADQLLEMGFRPAIEKILSFLPKSRQTLLFSATMPQAVQQ 265
Query: 579 ---LVLKREHTYIDTVG-------------LGSVETP-----VKIKQSCLVAPHELHFQI 617
L LK++H +IDT+G E P +++QS + P E F
Sbjct: 266 VAGLALKKQHAFIDTIGEEDSATNTQARLPAAPREAPRPLHSPRVEQSYALVPMEDQFTA 325
Query: 618 LHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEF 677
+ +L+ H TPD+K+I RD+ S+EF
Sbjct: 326 IFSVLRRHAQTTPDHKIIS--------------------------------ARDKASKEF 353
Query: 678 RASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLAP 737
R + IL +SDVSARG+DYPDVT V+QVGIP REQYIHRLGRT R G+ G G+L+L P
Sbjct: 354 RTATSAILFSSDVSARGVDYPDVTMVLQVGIPSSREQYIHRLGRTARAGRAGVGLLILMP 413
Query: 738 WEEYFLDDLKDLPLDKLQLPHLNPEIQLQMDNHMAKIDNNVKEAAYHAWLGYYNSIREIG 797
E++F+ L+DLPL P+ + +A++ + + + AY AWLG+YNS + +G
Sbjct: 414 EEQHFMRQLRDLPLTAEPGVPTTPQDVAAVKAGLARVGDRLPDMAYAAWLGFYNSAKGMG 473
Query: 798 RDKTTLVELANKFAQSIGLQRPPPLFRKTALKMGLKDIPGIRL 840
K LV+ AN+F+ +GL +PPPL +KT MGLK +PG+R+
Sbjct: 474 WSKPELVQQANRFSAVMGLSQPPPLQKKTIGMMGLKGVPGLRI 516
>gi|255089893|ref|XP_002506868.1| predicted protein [Micromonas sp. RCC299]
gi|226522141|gb|ACO68126.1| predicted protein [Micromonas sp. RCC299]
Length = 486
Score = 361 bits (926), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 203/453 (44%), Positives = 287/453 (63%), Gaps = 18/453 (3%)
Query: 398 GYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLVPPIY 457
GY T VQ+ TL L+G D + +AKTG+GK+IAFL+P+IE +L++ + +
Sbjct: 9 GYTHATAVQDQTLPPILKGLDVLARAKTGSGKTIAFLVPSIETLLRSPAGRAGD----VS 64
Query: 458 VLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILVATPGR 517
VL+L PTRELASQI E++ LLK H + + GGT K ++ R+ S C LVATPGR
Sbjct: 65 VLVLSPTRELASQIHEESLKLLKFH-ALKSQVVFGGTNIKSERSRMNSQRCDFLVATPGR 123
Query: 518 LLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQSLLFSATMPK 577
L+DH E SGL R LK+LVLDEAD LL++GF+ ++ I+ +PR+RQ+LLFSAT+P
Sbjct: 124 LIDHFET-SGLQPRCQNLKVLVLDEADQLLEMGFKPSIDKILGFIPRQRQTLLFSATVPN 182
Query: 578 EL------VLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILHHLLKEHILGTP- 630
++ L+ + Y+D VG T ++ Q +AP + H +L L+ H P
Sbjct: 183 QVKQIAANALRPGYAYVDCVGEEDSATNTQVTQWLTMAPLDDHLPLLVQLVNMHQAQNPV 242
Query: 631 DYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEFRASKRLILVTSDV 690
++KVI F T T L L + + V E++SRK Q +R + ++ FR +K ++++SDV
Sbjct: 243 EHKVICFFPTARATQLAAELFQALGKPVTEIHSRKSQGHRTKAADAFREAKCGVMMSSDV 302
Query: 691 SARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLAPWEEYFLDDLKDLP 750
SARG+DYPDVT VVQVG+P REQYIHRLGRT R GK GEG+LLLAP EE+F LKDLP
Sbjct: 303 SARGLDYPDVTLVVQVGLPSSREQYIHRLGRTARAGKTGEGLLLLAPHEEFFTRQLKDLP 362
Query: 751 LDKLQLPHLNPEIQLQMDNHMAKIDNNVKEAAYHAWLGYYN-SIREIGRDKTTLVELANK 809
+ ++P++ ++N + ++D KE AY AWLG+YN S ++G DK LV+ N+
Sbjct: 363 ITPAP-ASVDPDVLNAVNNALRRVDVRTKEQAYVAWLGFYNSSTGKMGWDKKRLVDEGNR 421
Query: 810 FAQSIGLQRP--PPLFRKTALKMGLKDIPGIRL 840
+A + LQ P P + +KT MGLK +PG+ L
Sbjct: 422 YALEV-LQCPGLPGILKKTVGMMGLKGVPGLNL 453
>gi|412990618|emb|CCO17990.1| predicted protein [Bathycoccus prasinos]
Length = 502
Score = 357 bits (915), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 194/463 (41%), Positives = 286/463 (61%), Gaps = 16/463 (3%)
Query: 381 FDECGISPLTIKALT-AAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIE 439
F G+S +++A+T + T VQ+ TL +G D + +AKTG+GK++ F LP+IE
Sbjct: 3 FASMGLSKQSMRAITEVCKFTHATAVQDQTLPHITKGVDVLARAKTGSGKTVGFTLPSIE 62
Query: 440 AVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVD 499
++K + + VLI+ PTRELASQI EA LL H+ G + GGT D
Sbjct: 63 LLMKNPETRKGD----VSVLIVSPTRELASQIHVEANQLLTFHE-YGAQVVFGGTNIGTD 117
Query: 500 QRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIV 559
++RL + C LVATPGRL+DH+EN+ GL R+ L++LVLDEAD LL++GFR +E I+
Sbjct: 118 KKRLRENRCDFLVATPGRLIDHLENE-GLRERMSNLRVLVLDEADQLLEMGFRPSIEKIL 176
Query: 560 DCLPRRRQSLLFSATMPKEL------VLKREHTYIDTVGLGSVETPVKIKQSCLVAPHEL 613
LPR RQ+LLFSAT+P + + H YID VG + T ++ Q VA +
Sbjct: 177 SYLPRNRQTLLFSATVPDAVKQIAANAMSDNHVYIDCVGDEATATNSQVAQWLTVADTKD 236
Query: 614 HFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRI 673
H +L +++ H P++K++ F T T L + M + V E++SRK Q R +
Sbjct: 237 HLALLLQVIEAHAREVPNHKIMCFFPTARATGLASEVFEAMGIKVFEIHSRKSQSARTKA 296
Query: 674 SEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVL 733
+++FRASK ++++SDV+ARGMD+PDVT V+Q+G+P REQY+HRLGRTGR GK GEG+L
Sbjct: 297 ADQFRASKSAVMMSSDVTARGMDFPDVTFVIQIGLPSSREQYVHRLGRTGRAGKTGEGLL 356
Query: 734 LLAPWEEYFLDDLKDLPLDKLQLPHLNPEIQLQMDNHMAKIDNNVKEAAYHAWLGYYN-S 792
+LA +E+Y L +KDLPL ++ ++P +++ + K+D+ K+ AY AW+G+YN S
Sbjct: 357 ILADFEKYILRSMKDLPL-QVAEASVDPNASDRINRALQKVDSKTKDQAYVAWMGFYNSS 415
Query: 793 IREIGRDKTTLVELANKFAQSI-GLQRPPPLFRKTALKMGLKD 834
+IG K LV AN +A + G P + KT MGL++
Sbjct: 416 TGKIGWSKNDLVHAANSYAIDVLGCSGLPGVLAKTVGMMGLRE 458
>gi|303275900|ref|XP_003057244.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226461596|gb|EEH58889.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 1116
Score = 353 bits (907), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 198/473 (41%), Positives = 291/473 (61%), Gaps = 15/473 (3%)
Query: 377 SQKRFDECGISPLTIKALT-AAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLL 435
S F G+S +++A++ + T VQ+ TL ++G D + +AKTG+GK++AFLL
Sbjct: 94 STTSFAALGLSAPSLRAISEVMKFTHATSVQDQTLPPIMKGLDTLARAKTGSGKTVAFLL 153
Query: 436 PAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTR 495
P IE + + + + L+L PTRELASQI E+ +LL H+ + GGT
Sbjct: 154 PTIELLHRTGPAPGNG---SVSCLVLSPTRELASQIHEESKSLLAFHN-FKSHVVFGGTN 209
Query: 496 FKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDV 555
++ R+ C LVATPGRL+DH E SGL R LK+LVLDEAD LL++GF+ V
Sbjct: 210 INSERGRMNGGRCDFLVATPGRLIDHFET-SGLQPRCANLKVLVLDEADQLLEMGFKPAV 268
Query: 556 ENIVDCLPRRRQSLLFSATMPKEL------VLKREHTYIDTVGLGSVETPVKIKQSCLVA 609
+ I+ +PR RQ+LLFSAT+P+++ L+ + Y+D VG T +++KQ +A
Sbjct: 269 DRILSFIPRERQTLLFSATVPQQVRNIAANALRPGYAYVDCVGEEDSATNLQVKQWLTIA 328
Query: 610 PHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLY 669
P + H +L L+ H P++KV+ F T T L L + V E++SRK Q +
Sbjct: 329 PLDDHLILLVQLINMHQQQEPNHKVMCFFPTARSTQLAAELFEALGKPVTEIHSRKSQGH 388
Query: 670 RDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEG 729
R + +++FRASK ++++SDV+ARGMD+PDVT V+QVG+P +EQYIHRLGRT R GK G
Sbjct: 389 RTKAADQFRASKCAVMMSSDVTARGMDFPDVTLVIQVGLPSSKEQYIHRLGRTARAGKTG 448
Query: 730 EGVLLLAPWEEYFLDDLKDLPLDKLQLPHLNPEIQLQMDNHMAKIDNNVKEAAYHAWLGY 789
EG+LLLAP EE+F L+DLP+ ++ I + N +A++D KE AY AW+G+
Sbjct: 449 EGLLLLAPHEEFFARQLRDLPITPAP-ATVDGNIASAVANALARVDIRTKEQAYVAWMGF 507
Query: 790 YN-SIREIGRDKTTLVELANKFA-QSIGLQRPPPLFRKTALKMGLKDIPGIRL 840
YN S ++G K LV+ AN++A + +G P + +KTA MGLK +PG+ L
Sbjct: 508 YNGSCGKMGWGKPQLVQEANRYALEVLGCPGIPGILKKTAGMMGLKGVPGLNL 560
>gi|303277195|ref|XP_003057891.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226460548|gb|EEH57842.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 446
Score = 353 bits (906), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 196/448 (43%), Positives = 278/448 (62%), Gaps = 16/448 (3%)
Query: 403 TRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLVPPIYVLILC 462
T VQ+ TL ++GKD + +AKTG+GK+I FLLPAIEA+ A + P VL+L
Sbjct: 5 TAVQDQTLPHIMDGKDVLARAKTGSGKTIGFLLPAIEAL--ARDGGAARRGRP-RVLVLS 61
Query: 463 PTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHI 522
PTRELA+QI EA ALL HDG+G + GGT F D R L C ILVATPGRL+ H+
Sbjct: 62 PTRELATQILDEAKALLTFHDGVGAQVVFGGTNFNSDLRNLRDKRCDILVATPGRLIQHL 121
Query: 523 ENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQSLLFSATMPKELV-- 580
E+ G L + +LVLDEAD LLD+GF+ +E I+ +P+ RQSL+FSAT+ E+
Sbjct: 122 ED--GDRDLLRDVNVLVLDEADRLLDMGFKPSIEKILRSVPQDRQSLMFSATVSDEIKKI 179
Query: 581 ----LKREHTYIDTVGLG-SVETPVKIKQSCLVAPHELHFQILHHLLKEHILGTPDYKVI 635
L+ H Y+D VG +T ++KQS AP L ++ +H TP++K++
Sbjct: 180 AAAGLRPGHVYVDCVGEEEGPDTNAQVKQSLAAAPLSHQMPTLAQIIDDHAATTPNHKIM 239
Query: 636 VFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEFRASKRLILVTSDVSARGM 695
F +T T L R + ++ E++S+ Q R + +++FRA+KR +++TSDV+ARG+
Sbjct: 240 CFFTTARGTGFAAELFRSFRDDIVEIHSKMSQSKRTKATDQFRAAKRAVMMTSDVTARGI 299
Query: 696 DYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLAPWEEYFL-DDLKDLPLDKL 754
D+PDVT VVQ+GIP +REQYIHRLGRT R GK GEG+L+LAP EE+F D+ DLP+ +
Sbjct: 300 DFPDVTLVVQIGIPANREQYIHRLGRTARAGKSGEGILMLAPREEFFAKKDVGDLPIVRA 359
Query: 755 QLPHLNPEIQLQMDNHMAKIDNNVKEAAYHAWLGYYNS-IREIGRDKTTLVELANKFAQS 813
++ E ++ M + + K Y AWLGY+ I+++G TLV AN +A
Sbjct: 360 TF-DVSDENVAKISRAMDAVSDKTKAQTYAAWLGYHKPFIKKMGWTPETLVREANDYATE 418
Query: 814 I-GLQRPPPLFRKTALKMGLKDIPGIRL 840
+ G PPP+ +KT MGLK +PG+ +
Sbjct: 419 VMGCPEPPPMMKKTVGMMGLKGVPGLNI 446
>gi|308807707|ref|XP_003081164.1| myc-regulated DEAD/H box 18 RNA helicase-like (ISS) [Ostreococcus
tauri]
gi|116059626|emb|CAL55333.1| myc-regulated DEAD/H box 18 RNA helicase-like (ISS) [Ostreococcus
tauri]
Length = 2729
Score = 350 bits (899), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 188/467 (40%), Positives = 292/467 (62%), Gaps = 16/467 (3%)
Query: 377 SQKRFDECGISPLTIKAL-TAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLL 435
S F G++ + +A+ G+ T VQ+ATL ++G D + +AKTG+GK++ FLL
Sbjct: 2199 STAAFANMGLTEASARAIRDVMGFTHATSVQDATLPHIMQGLDVLARAKTGSGKTVGFLL 2258
Query: 436 PAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTR 495
PAIE + +A + + L++ PTRELASQI EA +LL H + GGT
Sbjct: 2259 PAIERLARAGAPQRGN----VSCLVISPTRELASQIGEEAKSLLSFHP-FKCQVVFGGTN 2313
Query: 496 FKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDV 555
+++RL+++P + L+ATPGRL+DH E+ L+ L +LVLDEAD LLD+GFR +
Sbjct: 2314 INSERKRLKTEPVEFLIATPGRLIDHFES-GDLARACQNLDVLVLDEADQLLDMGFRPSL 2372
Query: 556 ENIVDCLPRRRQSLLFSATMPKEL------VLKREHTYIDTVGLGSVETPVKIKQSCLVA 609
E I+ LP +RQ+LLFSAT+PK + L+ H YID VG + T +++KQS ++A
Sbjct: 2373 EKILSFLPNQRQTLLFSATVPKTVHQIAANALRPGHQYIDCVGEDAPATNLQVKQSLIMA 2432
Query: 610 PHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLY 669
P H ++ +++ H ++K++VF +T T L M V E++SRK Q
Sbjct: 2433 PFHDHLTLMTQVIERHQAEEQNHKIMVFFTTARSTQLASETFEAMGKPVFEIHSRKSQAV 2492
Query: 670 RDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEG 729
R + +++FRAS+ ++ +SDV+ARGMD+PDVT V+Q+G+P +REQYIHRLGRTGR GK G
Sbjct: 2493 RTKAADKFRASRAAVMFSSDVTARGMDFPDVTMVIQIGVPSNREQYIHRLGRTGRAGKTG 2552
Query: 730 EGVLLLAPWEEYFLDDLKDLPLDKLQLPHLNPEIQLQMDNHMAKIDNNVKEAAYHAWLGY 789
+G+L+L P E++F++ ++DLP++ L ++P+ + + K++ + K AY AWLG+
Sbjct: 2553 KGLLMLDPAEKFFMNGVRDLPIEVLD-SSVDPQTDQAVRLAIRKVNPDTKSQAYSAWLGF 2611
Query: 790 YN-SIREIGRDKTTLVELANKFA-QSIGLQRPPPLFRKTALKMGLKD 834
YN S ++ K L+ AN +A +++ + P L +KT KMGL+D
Sbjct: 2612 YNGSSSKMRWSKEDLIFAANNYALETLQCDQLPGLMKKTIGKMGLRD 2658
>gi|440803766|gb|ELR24649.1| DEAD/DEAH box helicase domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 616
Score = 350 bits (898), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 206/495 (41%), Positives = 292/495 (58%), Gaps = 30/495 (6%)
Query: 371 EEEPILSQKRFDECG--ISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTG 428
E +P +++ F I +++AL AG+ MT+VQEA + + GKD + KA+TGTG
Sbjct: 127 ESKPFMTKTTFASMSNLICRESLQALQQAGFTYMTQVQEAAIPIAVTGKDLIAKARTGTG 186
Query: 429 KSIAFLLPAIEAVLKATSSSTTQLVPP--IYVLILCPTRELASQIAAEAIALLKNHDGIG 486
K++ FL+P+IE L A S PP I +L++ PTRELA Q EA LLK H
Sbjct: 187 KTLGFLMPSIER-LHAKKYSRPLFTPPGKIAILVISPTRELAMQTMKEAQMLLKQHR-YR 244
Query: 487 VLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHL 546
++GGT K +QR L ILVATPGRLLDHI+N G+ L + +LVLDEAD L
Sbjct: 245 AQCVIGGTNIKSEQRNLNQGGVDILVATPGRLLDHIQNSRGVRELLDSVSVLVLDEADKL 304
Query: 547 LDLGFRKDVENIVDCLP--RRRQSLLFSATMPKEL------VLKREHTYIDTVGLGSVET 598
L++GF+KD++ IV LP RQ+LLFSATMP +L ++ H IDTVG +T
Sbjct: 305 LEMGFKKDIDTIVSYLPPTGHRQTLLFSATMPDQLAQLVRNIIAPTHQTIDTVG--DDQT 362
Query: 599 PVKIKQSCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLRE-MKMN 657
V++KQ ++AP + I + +++EH+ DYK+I F T +T + L + + +
Sbjct: 363 NVQVKQEYVIAPFKDQIPIFYQMVREHMASERDYKIIAFFVTARMTQFMANLFNDCLGIP 422
Query: 658 VREMYSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 717
E++SRK Q R S++FR K +I+ +SDVSARG+DYPDVT V+Q+G+P D QYIH
Sbjct: 423 TLEIHSRKSQSQRTSTSDKFRKGKNVIMFSSDVSARGVDYPDVTLVLQMGLPADSAQYIH 482
Query: 718 RLGRTGREGKEGEGVLLLAPWEEYFLDDLKDLPLDK------LQLPHLNPEIQLQMDNH- 770
RLGRT R GKEG G+LLLA +E FL L++LP+ + L P + + H
Sbjct: 483 RLGRTARAGKEGSGLLLLADFEAKFLGKLRELPITEYKPKRPLATYETMPAEMMALQGHK 542
Query: 771 ----MAKIDNNVKEAAYHAWLGYYNS-IREIGRDKTTLVELANKFAQSIGLQRPPPLFRK 825
+ K+ + + + AY +WLGYYN R + K LV AN+ A +G RPP L +
Sbjct: 543 GARGLKKLQDGIGQ-AYQSWLGYYNGHSRYLNWSKEQLVAQANELATILGADRPPKLTAQ 601
Query: 826 TALKMGLKDIPGIRL 840
KMGL+ + G+ +
Sbjct: 602 CIGKMGLRGVRGLAM 616
>gi|255072363|ref|XP_002499856.1| predicted protein [Micromonas sp. RCC299]
gi|226515118|gb|ACO61114.1| predicted protein, partial [Micromonas sp. RCC299]
Length = 499
Score = 343 bits (881), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 198/453 (43%), Positives = 276/453 (60%), Gaps = 26/453 (5%)
Query: 403 TRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLVPP-----IY 457
T VQ+A L + GKD + +AKTG+GK+IAFLLP +E LK T PP I
Sbjct: 1 TEVQDAVLPHIMAGKDVLARAKTGSGKTIAFLLPVLEK-LKRT--------PPERRGGIS 51
Query: 458 VLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILVATPGR 517
L+L PTRELA+QI E LL I + GGT + D RL+S+ C ILVATPGR
Sbjct: 52 ALVLSPTRELATQIQEECKQLLTFRRDINAQVVFGGTNIRTDVSRLKSERCDILVATPGR 111
Query: 518 LLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQSLLFSATMPK 577
L+DH+EN +S RL LV DEAD LLD+GF+ +E I+ +P RQ+LLFSAT+
Sbjct: 112 LIDHLEN-GDVSARLKSCDTLVFDEADRLLDMGFKPAIEKILRHVPAGRQTLLFSATVSP 170
Query: 578 EL------VLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILHHLLKEHILGTPD 631
E+ L+ H ++D VG T +++KQS +VA F +L +L EH TP+
Sbjct: 171 EIQQVAKKSLRSGHVFVDCVGEEESATNLQVKQSLVVAAQVDQFAVLKSILDEHCAKTPN 230
Query: 632 YKVIVFCSTGMVTSLLYLLLRE-MKMNVREMYSRKPQLYRDRISEEFRASKRLILVTSDV 690
+KV+ F +T T L L ++ + +V E++S+ Q R + ++ FR + R +++TSDV
Sbjct: 231 HKVMCFFTTARATQLAAELFQQILPTDVIEIHSKLSQSRRTKATDAFRDASRAVMMTSDV 290
Query: 691 SARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLAPWEEYFL-DDLKDL 749
+ARG+D+PDV+ VVQ+G P DR QYIHRLGRT R GK GEGVL+LAP EEYF DD++DL
Sbjct: 291 TARGIDFPDVSLVVQIGAPSDRAQYIHRLGRTARAGKSGEGVLVLAPEEEYFAKDDVRDL 350
Query: 750 PLDKLQLPHLNPEIQLQMDNHMAKIDNNVKEAAYHAWLGYYNS-IREIGRDKTTLVELAN 808
PL K+ P+ + + M ++D+ K Y A LGY +R++G + LV AN
Sbjct: 351 PLAKVT-PNHGEDDAAAVAAAMRRVDDRTKAQHYAAELGYRKGLLRKMGWNAERLVREAN 409
Query: 809 KFAQS-IGLQRPPPLFRKTALKMGLKDIPGIRL 840
+A +G + PPP+ + T KMGLK +PG+ +
Sbjct: 410 AYAVDFMGCREPPPMLKSTVGKMGLKGVPGLNV 442
>gi|145350269|ref|XP_001419535.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144579767|gb|ABO97828.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 545
Score = 341 bits (875), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 191/462 (41%), Positives = 286/462 (61%), Gaps = 24/462 (5%)
Query: 385 GISPLTIKAL-TAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLK 443
G++ +++A+ G+ T VQ++TL + G D + +AKTG+GK++ FLLPAIE + K
Sbjct: 2 GLTEASMRAIHEVMGFTHATAVQDSTLPHIMRGLDVLARAKTGSGKTVGFLLPAIERLAK 61
Query: 444 ATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRL 503
+ + L++ PTRELASQI EA +LL H + GGT +++RL
Sbjct: 62 QGAPRKGD----VSCLVISPTRELASQIGEEAKSLLTYHP-FNCQVVFGGTNINSERKRL 116
Query: 504 ESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLP 563
S + LVATPGRL+DH E+ S L+ L +LVLDEAD LLD+GFR +E I+ LP
Sbjct: 117 TSQGVEFLVATPGRLIDHFES-SNLARACQNLDVLVLDEADQLLDMGFRPSLEKILSYLP 175
Query: 564 RRRQSLLFSATMPKEL------VLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQI 617
+RQ+LLFSAT+PK + L+ H YID VG + T +++KQS +VA H +
Sbjct: 176 TQRQTLLFSATVPKTVHQIAANALRPGHQYIDCVGDDAPATNLQVKQSLIVASFHDHLTL 235
Query: 618 LHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEF 677
+ ++EH P++K++VF T T L + V E++SRK Q R + +++F
Sbjct: 236 MTQAIEEHQAEEPNHKIMVFFPTARSTQLASEMFEACGKPVFEIHSRKSQAVRTKAADKF 295
Query: 678 RASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLAP 737
R ++ ++++SDV+ARGMD+PDVT V+Q+G+P REQYIHRLGRTGR GK G+G+L+L P
Sbjct: 296 REARAAVMMSSDVTARGMDFPDVTMVIQIGVPSAREQYIHRLGRTGRAGKTGKGLLMLDP 355
Query: 738 WEEYFLDDLKDLPLDKLQLPHLNPEIQLQMDNH----MAKIDNNVKEAAYHAWLGYYN-S 792
E++FL+ ++DLP++ LNP I Q+D +++I+ + K AY AWLG+YN S
Sbjct: 356 AEKFFLNGVRDLPIEV-----LNPAIDSQVDQRVRKAISRINPDTKAQAYSAWLGFYNGS 410
Query: 793 IREIGRDKTTLVELANKFA-QSIGLQRPPPLFRKTALKMGLK 833
++ K L+ AN +A +++ + P L +KT KMGLK
Sbjct: 411 SGKMKWSKDDLIFAANNYALETLQCESLPGLLKKTVGKMGLK 452
>gi|384245121|gb|EIE18616.1| DEAD-domain-containing protein [Coccomyxa subellipsoidea C-169]
Length = 558
Score = 337 bits (865), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 197/483 (40%), Positives = 289/483 (59%), Gaps = 26/483 (5%)
Query: 376 LSQKRFDECGISPLTIKALT-AAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFL 434
L++ F +S T++ +T GY T+VQ TL A L G D V KAKTGTGK++AFL
Sbjct: 82 LTEATFASFELSAATLRGITEVMGYTNCTKVQAETLPATLRGLDVVCKAKTGTGKTLAFL 141
Query: 435 LPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGT 494
+P IE +L+A + I +L++ PTRELA+QIA EA L K H + V + GGT
Sbjct: 142 IPGIERMLEAPAGRGK-----IAMLVISPTRELAAQIAEEAKQLTK-HQNLAVQVMFGGT 195
Query: 495 RFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKD 554
D L+ +LVATPGRLLDH++N L L L+MLVLDEAD LLD+GFR++
Sbjct: 196 NMNRDITDLQRRVPDVLVATPGRLLDHLQNTGTLPPMLSNLRMLVLDEADRLLDMGFRQE 255
Query: 555 VENIVDCLPRR--RQSLLFSATMPKEL------VLKREHTYIDTVGLGSVETPVKIKQSC 606
+E +V LP + RQ++LFSAT P + L+ E+ +DTVG ++Q
Sbjct: 256 IEKLVRMLPPKNGRQNMLFSATYPSNIRELAGIALRPEYQVVDTVGEEDTHAAETVQQQY 315
Query: 607 LVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKP 666
+V E L ++++H+ P +K++ F T VT L + M + V EM+SRK
Sbjct: 316 IVTSMEDQNAHLLAVIRQHMSEDPSFKIMAFFVTARVTQFYCELFQAMGIPVLEMHSRKS 375
Query: 667 QLYRDRISEEFRASKR-LILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGRE 725
Q R + +++FRASK I+ +SDVSARG+DYPDV+ VVQ+G+P ++ QY+HRLGRT R
Sbjct: 376 QAQRTKAADQFRASKGGCIMFSSDVSARGVDYPDVSLVVQLGLPMEKAQYVHRLGRTARA 435
Query: 726 GKEGEGVLLLAPWEEYFLDDLKDLPLDKLQLPHLNPEI----QLQMDNHMAKIDNNVKEA 781
GK G+G+++L +E FL+ L DLP+ P +P++ Q ++ +A + K
Sbjct: 436 GKSGKGLIILGDYESNFLNSLSDLPITA--APSPSPQVFAGAQEAVEAGLAAVAYASKAQ 493
Query: 782 AYHAWLGYYNSIREIGR-DKTTLVELANKFAQSIGL-QRPPPLFRKTALKMGLKD--IPG 837
AY WLG+Y ++ + D T L++ AN++A ++G +PPP+ ++T KMGLK +P
Sbjct: 494 AYRTWLGFYKGFCKMCKWDSTRLIQAANQYAVTLGCGAQPPPIEKRTVGKMGLKGQCLPA 553
Query: 838 IRL 840
I L
Sbjct: 554 ILL 556
>gi|299117615|emb|CBN75457.1| DEAD box helicase [Ectocarpus siliculosus]
Length = 610
Score = 337 bits (863), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 205/479 (42%), Positives = 285/479 (59%), Gaps = 30/479 (6%)
Query: 378 QKRFDECGISPLTIKALTAA-GYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLP 436
+ +F + +S T +A+ GY +T+VQ ++ L G D + KAKTGTGK+++FL P
Sbjct: 143 ESKFAQLPLSAPTQRAIAEVLGYATLTKVQNDSIPPALAGHDVLAKAKTGTGKTLSFLFP 202
Query: 437 AIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRF 496
AIE V + + I+VLI+ PTRELA QIA EA +L HD + ++ +VGGT
Sbjct: 203 AIEGVARTPRAQRKG----IWVLIISPTRELAQQIADEANQVLTFHD-MSLICVVGGTNI 257
Query: 497 KVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVE 556
K D R P I+VATPGRL DH++N +GL+ + GL L+ DEAD LL++GFR +E
Sbjct: 258 KADIRGFRDRP-DIVVATPGRLNDHLDN-NGLAKDMAGLSHLIFDEADQLLEMGFRPAIE 315
Query: 557 NIVDCLP--RRRQSLLFSATMP------KELVLKREHTYIDTVGLGSVETPVKIKQSCLV 608
I+ +P R RQ+LLFSATMP +L LK + ++D VG T + Q V
Sbjct: 316 AILRYMPHSRDRQTLLFSATMPGDVRKIAQLALKERYEFVDCVG-EEESTHQHVPQQYTV 374
Query: 609 APHELHFQILHHLLKEHILGTP-DYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQ 667
+ + L LL+E++ P +K+IVF +T +T L M V E++SRK Q
Sbjct: 375 CGQDQQVEELCQLLRENMAADPRGHKIIVFFTTARLTQFYAELCNLMGFPVLEIHSRKSQ 434
Query: 668 LYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGK 727
+R+++SE FR + L++ TSDVSARGMDYPDV++V+QVG+P D+ QYIHRLGRT R GK
Sbjct: 435 GHRNKVSELFRNGQGLVMFTSDVSARGMDYPDVSAVIQVGLPSDKAQYIHRLGRTARAGK 494
Query: 728 EGEGVLLLAPWEEYFLDDLKDL------PLDKLQLPHLNPEIQLQMDNHMAKIDNNVKEA 781
G GVLLL +E FL D++DL PL K + + P + D MA++
Sbjct: 495 AGHGVLLLCDFESMFLSDVRDLPMQRRDPLPKASVAQITPAVSEAYDK-MARLS---VVC 550
Query: 782 AYHAWLGYYNS-IREIGRDKTTLVELANKFAQSIGLQRPPPLFR-KTALKMGLKDIPGI 838
AY AWLG+YN +R IG K LV AN + +I Q+ P + KT KMGL+ +PGI
Sbjct: 551 AYQAWLGFYNGHLRRIGWSKADLVAQANYWITTICRQQEVPGIQAKTLGKMGLRGVPGI 609
>gi|301117296|ref|XP_002906376.1| DEAD/DEAH box RNA helicase, putative [Phytophthora infestans T30-4]
gi|262107725|gb|EEY65777.1| DEAD/DEAH box RNA helicase, putative [Phytophthora infestans T30-4]
Length = 590
Score = 332 bits (850), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 202/483 (41%), Positives = 286/483 (59%), Gaps = 30/483 (6%)
Query: 376 LSQKRFDECGISPLTIKALTA-AGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFL 434
LS F IS T +A+ Y+++T VQ T +EGKD + KAKTG GK+IAFL
Sbjct: 89 LSDVLFASLDISAKTKRAIVDDLKYVRLTNVQNETFPLIVEGKDVLAKAKTGNGKTIAFL 148
Query: 435 LPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGT 494
LP IE ++K S I L + PTRELA QIA EA L K HD V VGG
Sbjct: 149 LPVIENMVKEGRRSGV-----IPTLAISPTRELALQIATEAKRLTKYHD-FNVACFVGGA 202
Query: 495 RFKVDQRRLESD-PCQILVATPGRLLDHIENKSG-LSVRLMGLKMLVLDEADHLLDLGFR 552
K D+R L S P ILVATPGRL+DH++ +G ++ RL +L+LDEAD LLD+GFR
Sbjct: 203 NIKKDERALTSSTPIDILVATPGRLVDHLKQNTGKIANRLGKASVLILDEADRLLDMGFR 262
Query: 553 KDVENIVDCLPRRRQSLLFSATMP------KELVLKREHTYIDTVGLGSVETPVKIKQSC 606
DV I+ LP+ RQ+LLFSAT+P K++ L+++++++DT+ +T V+ +Q
Sbjct: 263 PDVMRIIGYLPKERQTLLFSATLPASTEELKQVALRKDYSFVDTIDENEADTNVQTEQEY 322
Query: 607 LVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKM-NVREMYSRK 665
+V ++ +L EH + YKV++F T + L + V E++SRK
Sbjct: 323 IVCKMGEVIPMVERVLAEH-MKLAAYKVMLFFPTARSAQFMAQLFQAAGYPGVLEIHSRK 381
Query: 666 PQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGRE 725
Q R + +E FR K++++ +SDVSARG+DYPDV+ V+QVG+ DR+QYIHRLGRT R
Sbjct: 382 SQAVRTKTAEAFRKGKKVMMFSSDVSARGVDYPDVSLVLQVGL-TDRDQYIHRLGRTARA 440
Query: 726 GKEGEGVLLLAPWEEYFLDDLKDLPLDKLQLPHLNPEIQLQMDNHMAKIDNNVK------ 779
G +G+GVL+L +E LD L DLPL LQ + +PE+ + + ++ N+K
Sbjct: 441 GMKGKGVLILTEFETPLLDKLADLPL--LQSKNHSPEMLVPSQSRALEVTKNLKNYSDVE 498
Query: 780 ---EAAYHAWLGYYNS-IREIGRDKTTLVELANKFAQSIGLQRPPPLFRKTALKMGLKDI 835
+ +Y AWLG+YNS R + LV+LA ++++IGL P L +KT KM L +
Sbjct: 499 KSAQQSYQAWLGFYNSHARRLKLKSVELVQLAADYSRNIGLDEVPKLEKKTLKKMNLLGV 558
Query: 836 PGI 838
PGI
Sbjct: 559 PGI 561
>gi|397643063|gb|EJK75628.1| hypothetical protein THAOC_02639 [Thalassiosira oceanica]
Length = 580
Score = 323 bits (829), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 200/491 (40%), Positives = 294/491 (59%), Gaps = 33/491 (6%)
Query: 376 LSQKRFDECGISPLTIKALTAA-GYIQMTRVQEATLSACLE--GKDAVVKAKTGTGKSIA 432
+++ RF + I+ + +A+ Y MT VQ TL L G+D + KAKTGTGK++A
Sbjct: 95 MTESRFADLPIAAESRRAMAEVFRYETMTEVQAKTLPLILADGGRDCMAKAKTGTGKTLA 154
Query: 433 FLLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLK--NHDGIGVLTL 490
F++P +E ++ + + I L++ PTRELA QI AE LL+ N+ V+
Sbjct: 155 FMIPTVEKLMVHMKKNNARASRDIGCLVISPTRELAQQIGAETEKLLRFQNNSMRKVVVC 214
Query: 491 VGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLG 550
VGGT D R LE I++ATPGRLLDH+E SGL+ R+ L LV DEAD LLD+G
Sbjct: 215 VGGTNRNKDVRALEG-VTPIVIATPGRLLDHLE--SGLAERMANLDTLVFDEADQLLDMG 271
Query: 551 FRKDVENIVDCL---PRRRQSLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVK 601
FR DV I+ L RQ+LLFSAT+P + + ++ ++ ++DTVG +T +
Sbjct: 272 FRPDVLRILKFLQPSASTRQTLLFSATIPDQVEVIAGIAMRPQYNFVDTVG-EEEQTHLH 330
Query: 602 IKQSCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK----MN 657
++QS +V+ E + L +L+E + +KVIVF +T +T L+ + + N
Sbjct: 331 VRQSAMVSRQEHQIEALFSILQERT-SSSSHKVIVFFTTARLTQLMAEMFNSVSDITGYN 389
Query: 658 VREMYSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 717
V E++SRK Q R++ SE+FR S+ ++ +SDV+ARGMDYPDVT V+QVG+ ++ QYIH
Sbjct: 390 VLEIHSRKSQSQREKASEKFRKSRSAVMFSSDVTARGMDYPDVTYVLQVGL-TEQSQYIH 448
Query: 718 RLGRTGREGKEGEGVLLLAPWEEYFL--DDLKDLPLDKLQLPHLNPEIQLQMDNHMAKID 775
RLGRT R GK+GEG LLLA +EE + +L+D+P+++ +P +P +A +
Sbjct: 449 RLGRTARAGKDGEGGLLLADYEEGHMLSKELRDMPIERTAVPR-SPVATTAAQRAIANVG 507
Query: 776 N-----NVKEAAYHAWLGYYN-SIREIGRDKTTLVELANKFAQSIGLQRPPPLFRKTALK 829
E AY AWLGYYN ++R+ DK LV+ AN +A +GL+ P L +KT K
Sbjct: 508 TMESLGATAEQAYRAWLGYYNGNLRKCRWDKRQLVQQANTWAIDVGLKEQPGLQKKTIGK 567
Query: 830 MGLKDIPGIRL 840
MGLK PG+R+
Sbjct: 568 MGLKGTPGLRI 578
>gi|348688326|gb|EGZ28140.1| hypothetical protein PHYSODRAFT_343735 [Phytophthora sojae]
Length = 588
Score = 322 bits (826), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 199/482 (41%), Positives = 282/482 (58%), Gaps = 28/482 (5%)
Query: 376 LSQKRFDECGISPLTIKALTA-AGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFL 434
LS F IS T +A+ Y ++T VQ T ++GKD + KAKTG GK+IAFL
Sbjct: 84 LSDVLFASLDISAKTKRAIVEDLKYERLTNVQNETFPLIVDGKDVLAKAKTGNGKTIAFL 143
Query: 435 LPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGT 494
LP IE ++K S I L + PTRELA QIA EA L K HD + V VGG
Sbjct: 144 LPVIENMVKEGRRSGV-----IPTLAISPTRELALQIATEAKRLTKFHD-LKVACFVGGA 197
Query: 495 RFKVDQRRL-ESDPCQILVATPGRLLDHIENKSG-LSVRLMGLKMLVLDEADHLLDLGFR 552
K D+R L SDP ILVATPGRL+DH++ +G ++ RL +L+LDEAD LLD+GFR
Sbjct: 198 NIKKDERTLTSSDPIDILVATPGRLVDHLKQNTGKIADRLGKASVLILDEADRLLDMGFR 257
Query: 553 KDVENIVDCLPRRRQSLLFSATMP------KELVLKREHTYIDTVGLGSVETPVKIKQSC 606
DV I+ LP+ RQ+LLFSAT+P K++ L+++++++DT+ +T V+ +Q
Sbjct: 258 PDVMRIIGYLPKERQTLLFSATLPASTEELKQVALRKDYSFVDTIDENEADTNVQTEQEY 317
Query: 607 LVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKM-NVREMYSRK 665
+V E ++ +L H + P YKV++F T + L + V E++SRK
Sbjct: 318 VVCKMEEVIPMVERILAAH-MKLPAYKVMLFFPTARSAQFMAQLFQAAGFPGVLEIHSRK 376
Query: 666 PQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGRE 725
Q R + +E FR ++++ +SDVSARG+DYPDV+ V+QVG+ DR+QYIHRLGRT R
Sbjct: 377 SQAVRTKTAEAFRKGHKVMMFSSDVSARGVDYPDVSLVLQVGL-TDRDQYIHRLGRTARA 435
Query: 726 GKEGEGVLLLAPWEEYFLDDLKDLPLDKLQLPHLNPEIQLQMDNHMAKIDN-----NVKE 780
G +G+GVL+LA +E LD L DLPL+ + H ++ + + N V++
Sbjct: 436 GMKGKGVLVLAEFETPLLDKLSDLPLEPSKT-HTTAMLEPSQSRALGVVKNLKRYSEVEK 494
Query: 781 AA---YHAWLGYYNS-IREIGRDKTTLVELANKFAQSIGLQRPPPLFRKTALKMGLKDIP 836
+A Y AWLG+YNS + + LV LA ++ +GL P L +KT KM L +P
Sbjct: 495 SAQQSYQAWLGFYNSNSKRLKLKPEQLVHLAADYSSIVGLDEVPKLEKKTLKKMNLLGVP 554
Query: 837 GI 838
GI
Sbjct: 555 GI 556
>gi|302838348|ref|XP_002950732.1| hypothetical protein VOLCADRAFT_91218 [Volvox carteri f.
nagariensis]
gi|300263849|gb|EFJ48047.1| hypothetical protein VOLCADRAFT_91218 [Volvox carteri f.
nagariensis]
Length = 1262
Score = 319 bits (818), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 206/520 (39%), Positives = 280/520 (53%), Gaps = 68/520 (13%)
Query: 376 LSQKRFDECGISPLTIKALTAA-GYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFL 434
LS K+F E IS + +AL+ Y + VQ A++ CL +D + KAKTGTGK++AF+
Sbjct: 64 LSDKKFGEFSISLSSKRALSEVLRYELCSLVQAASIPVCLGPEDVIAKAKTGTGKTLAFI 123
Query: 435 LPAIEAVLKATSSSTTQLVPP--IYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVG 492
+P IE VL + PP + L+L PTRELA QI E +L H G+ + + G
Sbjct: 124 IPTIEKVL-------ARRAPPGKVSALVLSPTRELARQIQTETHKMLTFHPGLHSMVVYG 176
Query: 493 GTRFKVDQRRLESDPCQILVATPGRLLDHIENKS--GLSVRLMGLKMLVLDEADHLLDLG 550
G K R L IL+ATPGR D + L+ L ++LVLDEAD+LLD+G
Sbjct: 177 GVDVKKHLRALSQRMPDILIATPGRCWDIMTQSHDRALTTVLDSTRVLVLDEADNLLDMG 236
Query: 551 FRKDVENIVDCLP--RRRQSLLFSATMPKEL------VLKREHTYIDTVGLGSVETPVKI 602
FR + I+ LP +RQ+ LFSAT P ++ LKR+H Y+D VG V T +
Sbjct: 237 FRPQISKILGSLPPTSQRQTFLFSATFPADVKSLADVALKRQHRYVDAVGE-DVATHTHV 295
Query: 603 KQSCLVAP---HELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKM-NV 658
+ S LV P EL Q+L L+ HI PDYK+IVF T +T+ + V
Sbjct: 296 EASSLVVPLQRGELALQLLG-LIAAHIAQEPDYKIIVFLPTANLTAYYAEAFTVAGLRGV 354
Query: 659 REMYSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHR 718
E++SRK Q RDR S +FR+ RL++ +SDVSARG+DYP+VT V+Q+G P +REQYIHR
Sbjct: 355 LEIHSRKSQAQRDRASAQFRSESRLVMFSSDVSARGVDYPNVTYVIQLGAPANREQYIHR 414
Query: 719 LGRTGREGKEGEGVLLLAPWEEYFLDDLKDLPLDKLQLPHLNPEIQLQMDNHMA------ 772
GRTGR G+ G+G LLLA +E FLD L+DLP+ LQ +QL + +A
Sbjct: 415 AGRTGRAGRAGQGTLLLADFERPFLDRLRDLPITPLQ------PMQLALPGSLATRAGRC 468
Query: 773 -----------------------------KIDNNVKEAAYHAWLGYYNSIREIGRDKTTL 803
+ID + AY + LGYY S + +
Sbjct: 469 GGGNGAPAAGPMTEALLRDPQGVLGRVANQIDYATRARAYQSVLGYYKSHEVLKFRSEQV 528
Query: 804 VELANKFAQSI-GLQRPPPLFRKTALKMGLKDIPGIRLRK 842
V LAN++A + G PP L KT KMGLK +PG+ + K
Sbjct: 529 VGLANQYAAEVLGCPTPPGLLAKTVGKMGLKGVPGLVIVK 568
>gi|348688329|gb|EGZ28143.1| hypothetical protein PHYSODRAFT_468056 [Phytophthora sojae]
Length = 590
Score = 316 bits (810), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 193/463 (41%), Positives = 273/463 (58%), Gaps = 36/463 (7%)
Query: 398 GYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLVPPIY 457
GY +T VQ+ TL LEG+D + K KTG GK+IAFLLP +E +LK + I
Sbjct: 55 GYEFLTHVQKDTLPLVLEGRDVLAKGKTGNGKTIAFLLPTVERMLKNPRPKHGR----IS 110
Query: 458 VLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRL-ESDPCQILVATPG 516
L++ PTRELA QIA EA+ L H+ + VGG+ D + L +S +LV+TPG
Sbjct: 111 ALVISPTRELAQQIAVEAVKLTDAHN-LHTACFVGGSAVNKDVKLLTQSAGIDVLVSTPG 169
Query: 517 RLLDHIENKSG-LSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQSLLFSATM 575
RL H+E+ SG + +L L++LVLDEAD LLD+GFR D+ I+ LP+ RQ+LLFSAT+
Sbjct: 170 RLQAHLEDNSGRIRQKLEDLQVLVLDEADRLLDMGFRPDIMRIISHLPKERQTLLFSATL 229
Query: 576 P------KELVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILHHLLKEHILGT 629
P K++ L+ ++ ++DT+ +T + Q LV + + +L+EH +
Sbjct: 230 PTATEELKDVALRDDYAFVDTIEGDDQQTNTQAVQEYLVCDLQDVIPAVEGVLEEH-MKQ 288
Query: 630 PDYKVIVFCSTGMVTSLLYLLLREMKM-NVREMYSRKPQLYRDRISEEFRASKRLILVTS 688
+YKVIVF T + L + NV EM+SRK Q R + ++ FR K++I+ +S
Sbjct: 289 SEYKVIVFLPTARSAQFMAQLFQAAGFPNVLEMHSRKSQSARTKAADAFRKGKKMIMFSS 348
Query: 689 DVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLAPWEEYFLDDLKD 748
DVSARG+DYPDV+ V+QVG+ DR+QYIHRLGRT R G EG G+L+LA +E+ L DL D
Sbjct: 349 DVSARGVDYPDVSLVLQVGL-TDRDQYIHRLGRTARAGMEGRGILVLADFEKAMLQDLAD 407
Query: 749 LPLDKLQLPHLNPEIQLQMDNHMAKIDNNV------------KEAAYHAWLGYYNS-IRE 795
LPL +L E + Q+D H + + E AY A+LG+YNS ++
Sbjct: 408 LPLTEL-------EKRPQLDKHNNRTTRALANLHPRSELAQSAEKAYGAFLGFYNSNLKR 460
Query: 796 IGRDKTTLVELANKFAQSIGLQRPPPLFRKTALKMGLKDIPGI 838
+ KT LVE ++Q IGL+ P L +KT MGL PG+
Sbjct: 461 MNMSKTKLVETGALYSQLIGLEEVPMLTKKTLRAMGLMGTPGL 503
>gi|384500298|gb|EIE90789.1| hypothetical protein RO3G_15500 [Rhizopus delemar RA 99-880]
Length = 646
Score = 314 bits (805), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 201/495 (40%), Positives = 294/495 (59%), Gaps = 25/495 (5%)
Query: 358 NKLNGNGE--KKEKREEEPILSQKRFDEC-GISPLTIKALTAAG-YIQMTRVQEATLSAC 413
N+L+ E K ++ EP+ +Q RFD I+ T KAL Y M+ VQEA L+
Sbjct: 55 NQLSATAELLKSQETTIEPVEAQ-RFDAIQAITGNTQKALKKVFRYDTMSAVQEAVLTRL 113
Query: 414 LEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAA 473
D VKAKTGTGK++AFL+ AIE ++ + + ++I+ PTRELA+QIA
Sbjct: 114 PNQDDMFVKAKTGTGKTLAFLIAAIETAVR--NQKDLKHFDGTSIMIISPTRELANQIAD 171
Query: 474 EAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLM 533
EA L+ + V LVGG + +LE + C I+VATPGRL D + +
Sbjct: 172 EAQKLVSFYP-FKVHCLVGGDSKRRQINQLERNRCDIVVATPGRLYDMLTSVPRFKKMCQ 230
Query: 534 GLKMLVLDEADHLLDLGFRKDVENIVDCLP-RRRQSLLFSATMPKEL-------VLKREH 585
LK+LVLDEAD LLD+GF++D++NI+ LP RQ++LFSAT+ E+ LK +
Sbjct: 231 NLKVLVLDEADQLLDMGFKRDLQNILGELPDENRQTMLFSATISPEIRKNLGDFALKSSY 290
Query: 586 TYIDTVGLGSVETPVKIKQSCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTS 645
IDTVG V T + +KQS +VAP+ F ++ L +H KVIVF T T
Sbjct: 291 QLIDTVGENEVNTHMHVKQSAIVAPYHQQFALIQDHL-QHNQAAQAGKVIVFLPTTKATM 349
Query: 646 LLYLLLREMKMN--VREMYSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSV 703
L L + + + V E++S+K Q R +I++ FR S+ IL TSDVSARG+DYP V+ V
Sbjct: 350 LYAQLYKRLIPDRPVFELHSKKGQDQRAKIADRFRKSRGGILFTSDVSARGVDYPGVSLV 409
Query: 704 VQVGIPPDREQYIHRLGRTGREGKEGEGVLLLAPWEEYFLD-DLKDLPLD----KLQLPH 758
VQVG+P REQYIHRLGRTGR GK GEGV++LAP+E+ FL ++ DLP++ +L P
Sbjct: 410 VQVGVPSTREQYIHRLGRTGRAGKSGEGVIVLAPFEKDFLKAEVADLPIEAIRPELTDPA 469
Query: 759 LNPEIQLQMDNHMAKIDNNVKEAAYHAWLGYYNS-IREIGRDKTTLVELANKFAQSIGLQ 817
+ ++ ++ HM+ +D+ Y A+LGYY+ + +G+ + +++ A+KF S+G++
Sbjct: 470 VEESVKEEITKHMSYMDSETVREVYTAYLGYYSGRVAMLGKRREIVLDEASKFLGSLGVE 529
Query: 818 RPPPLFRKTALKMGL 832
P L + ++GL
Sbjct: 530 EVPRLSARFLSQLGL 544
>gi|298709151|emb|CBJ31095.1| DEAD box helicase [Ectocarpus siliculosus]
Length = 659
Score = 311 bits (798), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 196/478 (41%), Positives = 273/478 (57%), Gaps = 26/478 (5%)
Query: 376 LSQKRFDECGISPLTIKALT-AAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFL 434
++ +F++ +S T A++ GY MT+VQE ++ CL G D + KAKTGTGK++AFL
Sbjct: 104 ITTGQFNDLDLSKNTHAAISDVLGYANMTKVQEQSIPVCLTGVDVLAKAKTGTGKTVAFL 163
Query: 435 LPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGT 494
+PAIE K + LI+ PTRELA QIA EA ++ H + ++ VGG
Sbjct: 164 IPAIERAAKRGFGKG------VSALIISPTRELAQQIAVEAQQIMSFHR-LKLMCSVGGV 216
Query: 495 RFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKD 554
D +L S I+VATPGRLLD +EN GL + L LV DEAD LL++GFR
Sbjct: 217 NVNRDLNQLNSGAPDIMVATPGRLLDLMENH-GLGRDMRDLDTLVFDEADQLLEMGFRPA 275
Query: 555 VENIVDCLPRR---RQSLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQS 605
+ENI+ L RQ+L+FSATMP + + +K + +D VG T + Q
Sbjct: 276 IENILRNLQASKTYRQTLMFSATMPGDVQAIASIAMKPSYEVVDCVG-EEENTHQHVPQK 334
Query: 606 CLVAPHELHF-QILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSR 664
V P ++L +LK PD+K+IVF + L L +M ++V E +SR
Sbjct: 335 FAVVPMAEQIPRLLATILKAK--EDPDHKIIVFFVAARIVQLHAELFTQMGVDVLETHSR 392
Query: 665 KPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGR 724
K Q R R++E FR K I+ TSDVSARGMDYPDV+ V+QVG+P D QY+HRLGRT R
Sbjct: 393 KSQAARTRVAEAFRNGKGQIMFTSDVSARGMDYPDVSLVIQVGLPSDTNQYVHRLGRTAR 452
Query: 725 EGKEGEGVLLLAPWEEYFLDDLKDLPL--DKLQLPHLNPEIQLQMDNHMAKIDNNVKEAA 782
GK G G+L+LA E+ F+ ++ DLPL D+ P E + + + ++D A
Sbjct: 453 AGKGGSGLLVLAEAEKGFIREVGDLPLEEDERMDPGTMIEARQMVAGAVHRVDPVTVSKA 512
Query: 783 YHAWLGYY-NSIREIGRDKTTLVELANKFAQSI-GLQRPPPLFRKTALKMGLKDIPGI 838
Y AWLG+Y ++R + TLV AN +A + GL PPPL +T KMGL+D+ G+
Sbjct: 513 YQAWLGFYKGALRRLRWTPGTLVSSANSWAVDVWGLASPPPLQARTIGKMGLRDVDGL 570
>gi|406698562|gb|EKD01797.1| hypothetical protein A1Q2_03860 [Trichosporon asahii var. asahii
CBS 8904]
Length = 633
Score = 311 bits (798), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 194/463 (41%), Positives = 270/463 (58%), Gaps = 34/463 (7%)
Query: 403 TRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLVPPIYVLILC 462
T VQ ATL A LEG D + +AKTGTGK++AFL+P+I+ +L A + +L+L
Sbjct: 95 TEVQAATLPAILEGHDVLAQAKTGTGKTLAFLVPSIQRLLLAPLPDRSL----TSILVLS 150
Query: 463 PTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHI 522
PTRELASQIA A+ K +GV +VGGT D +RL+++ ILVATPGRLLD I
Sbjct: 151 PTRELASQIADAALTFTKGR--VGVQCVVGGTNINTDVKRLKTERADILVATPGRLLDLI 208
Query: 523 ENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRR----RQSLLFSATMPK- 577
EN G+ RL ++ LVLDEAD LLD GFR+++ I+D LP R RQ+LLFSAT+P+
Sbjct: 209 ENY-GVGSRLSQIRTLVLDEADRLLDQGFRRELVKILDALPDRKAVPRQTLLFSATLPEG 267
Query: 578 -----ELVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQ-ILHHLLKEHILGTP- 630
+ LK +H +I T+ + + Q LV P + L L +E +L
Sbjct: 268 VHSISSIALKPDHKFITTLKEEDINAHKHVVQELLVLPGDQMISGALEVLKREEMLAAER 327
Query: 631 -DYKVIVFCSTGMVTSLLYLLLREMKMN--VREMYSRKPQLYRDRISEEFRASKRLILVT 687
+KV+VF T L Y + + + V E++SR Q R + +++FRA+ R IL +
Sbjct: 328 GGFKVMVFLPTARAAGLYYEVFSNLPTSYPVWEIHSRMSQAKRTKSTDQFRAADRGILFS 387
Query: 688 SDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLAPWEEYFLDDLK 747
SDV+ARG+D VT+VVQVG+P EQY+HRLGRT R G +G GVL+LA +E +FL+D
Sbjct: 388 SDVTARGIDVQGVTAVVQVGLPSSGEQYVHRLGRTARAGAQGHGVLVLADFETFFLNDAT 447
Query: 748 DLPLDKLQLPHLN----PEIQLQMDNHMAKIDNNVKEAAYHAWLGYYN-SIREIGRDKTT 802
D L+ P L+ +D ++++ K AY AWLGYYN S++++ +
Sbjct: 448 IKTFDMLEYPALDGSSLAHASQLVDGALSQVSEEAKGQAYQAWLGYYNSSLKKLRWSQAD 507
Query: 803 LVELANKFAQSI-------GLQRPPPLFRKTALKMGLKDIPGI 838
LV AN++AQ PP L KT KMGLK +PG+
Sbjct: 508 LVRNANEYAQHTLKTAPGPNGWVPPALQAKTIGKMGLKGVPGL 550
>gi|301117302|ref|XP_002906379.1| DEAD/DEAH box RNA helicase, putative [Phytophthora infestans T30-4]
gi|262107728|gb|EEY65780.1| DEAD/DEAH box RNA helicase, putative [Phytophthora infestans T30-4]
Length = 499
Score = 311 bits (796), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 198/477 (41%), Positives = 279/477 (58%), Gaps = 33/477 (6%)
Query: 376 LSQKRFDECGISPLTIKALTA-AGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFL 434
LS F IS + LT GY +T VQ TL L+G+D + K KTG GK+IAFL
Sbjct: 32 LSDVSFASLPISQRSKDVLTRDMGYEFLTHVQNDTLPLVLDGRDVLAKGKTGNGKTIAFL 91
Query: 435 LPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGT 494
LP +E +L + I L++ PTRELA QIA EA+ L H G+ VGG+
Sbjct: 92 LPTLERMLTHPQPKQDK----ISALVISPTRELAQQIAVEAVKLTNAH-GLRTSCFVGGS 146
Query: 495 RFKVDQRRL-ESDPCQILVATPGRLLDHIENKSG-LSVRLMGLKMLVLDEADHLLDLGFR 552
D + L +S +LV+TPGRL H+E+ SG + +L L++LVLDEAD LLD+GFR
Sbjct: 147 AVNKDVKELTQSGGIDVLVSTPGRLQAHLEDNSGRIRQKLDSLQVLVLDEADRLLDMGFR 206
Query: 553 KDVENIVDCLPRRRQSLLFSATMP------KELVLKREHTYIDTVGLGSVETPVKIKQSC 606
D+ I+ LP+ RQ+LLFSAT+P K++ L ++ ++DT+ +T + Q
Sbjct: 207 PDIMRIISHLPKERQTLLFSATLPAATEELKDVALLDDYVFVDTIEGDDQQTNTQAVQEY 266
Query: 607 LVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKM-NVREMYSRK 665
+V + ++ +L+EH + P YKVIVF T + L + NV EM+SRK
Sbjct: 267 VVCDLQDVIPVVEGILEEH-MKLPAYKVIVFLPTARSAQFMAQLFQSAGFQNVLEMHSRK 325
Query: 666 PQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGRE 725
Q R + ++ FR K++I+ +SDVSARG+DYPDV+ V+QVG+ DR+QYIHRLGRT R
Sbjct: 326 SQSARTKAADAFRKGKKMIMFSSDVSARGVDYPDVSLVLQVGL-TDRDQYIHRLGRTARA 384
Query: 726 GKEGEGVLLLAPWEEYFLDDLKDLPLDKL-QLPHLNPEIQLQMDNHMAKIDNNVK----- 779
G EG G+L+LA +E+ L DL DLPL +L Q P L+ Q + + NV+
Sbjct: 385 GMEGRGILVLADFEKVMLRDLADLPLTELEQRPQLD-----QQNYRTTRALANVRQRSEL 439
Query: 780 ----EAAYHAWLGYYNS-IREIGRDKTTLVELANKFAQSIGLQRPPPLFRKTALKMG 831
E AY A+LG+YNS ++++ KT LVE ++Q IGL++ P L +KT MG
Sbjct: 440 EQSAEKAYAAFLGFYNSNLKKLKMSKTKLVETGALYSQLIGLEKVPSLQKKTLRAMG 496
>gi|401886609|gb|EJT50636.1| hypothetical protein A1Q1_08188 [Trichosporon asahii var. asahii
CBS 2479]
Length = 569
Score = 310 bits (794), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 194/463 (41%), Positives = 270/463 (58%), Gaps = 34/463 (7%)
Query: 403 TRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLVPPIYVLILC 462
T VQ ATL A LEG D + +AKTGTGK++AFL+P+I+ +L A + +L+L
Sbjct: 95 TEVQAATLPAILEGHDVLAQAKTGTGKTLAFLVPSIQRLLLAPLPDRSL----TSILVLS 150
Query: 463 PTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHI 522
PTRELASQIA A+ K +GV +VGGT D +RL+++ ILVATPGRLLD I
Sbjct: 151 PTRELASQIADAALTFTKGR--VGVQCVVGGTNINTDVKRLKTERADILVATPGRLLDLI 208
Query: 523 ENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRR----RQSLLFSATMPK- 577
EN G+ RL ++ LVLDEAD LLD GFR+++ I+D LP R RQ+LLFSAT+P+
Sbjct: 209 ENY-GVGSRLSQIRTLVLDEADRLLDQGFRRELVKILDALPDRKAVPRQTLLFSATLPEG 267
Query: 578 -----ELVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQ-ILHHLLKEHILGTP- 630
+ LK +H +I T+ + + Q LV P + L L +E +L
Sbjct: 268 VHSISSIALKPDHKFITTLKEEDINAHKHVVQELLVLPGDQMISGALEVLKREEMLAAER 327
Query: 631 -DYKVIVFCSTGMVTSLLYLLLREMKMN--VREMYSRKPQLYRDRISEEFRASKRLILVT 687
+KV+VF T L Y + + + V E++SR Q R + +++FRA+ R IL +
Sbjct: 328 GGFKVMVFLPTARAAGLYYEVFSNLPTSYPVWEIHSRMSQAKRTKSTDQFRAADRGILFS 387
Query: 688 SDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLAPWEEYFLDDLK 747
SDV+ARG+D VT+VVQVG+P EQY+HRLGRT R G +G GVL+LA +E +FL+D
Sbjct: 388 SDVTARGIDVQGVTAVVQVGLPSSGEQYVHRLGRTARAGAQGHGVLVLADFETFFLNDAT 447
Query: 748 DLPLDKLQLPHLN----PEIQLQMDNHMAKIDNNVKEAAYHAWLGYYN-SIREIGRDKTT 802
D L+ P L+ +D ++++ K AY AWLGYYN S++++ +
Sbjct: 448 IKTFDMLEYPALDGSSLAHASQLVDGALSQVSEEAKGQAYQAWLGYYNSSLKKLRWSQAD 507
Query: 803 LVELANKFAQSI-------GLQRPPPLFRKTALKMGLKDIPGI 838
LV AN++AQ PP L KT KMGLK +PG+
Sbjct: 508 LVRNANEYAQHTLKTAPGPNGWVPPALQAKTIGKMGLKGVPGL 550
>gi|159479594|ref|XP_001697875.1| hypothetical protein CHLREDRAFT_151537 [Chlamydomonas reinhardtii]
gi|158273973|gb|EDO99758.1| predicted protein [Chlamydomonas reinhardtii]
Length = 617
Score = 308 bits (789), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 196/498 (39%), Positives = 277/498 (55%), Gaps = 34/498 (6%)
Query: 372 EEPILSQKRFDECGISPLTIKALTAA-GYIQMTRVQEATLSACLEGKDAVVKAKTGTGKS 430
++ LS +F E ISP + +AL Y + + VQ A++ CL D + KAKTGTGK+
Sbjct: 23 DQKYLSDTKFAEFKISPDSKRALAEVLKYERCSLVQAASIPVCLGPDDVIAKAKTGTGKT 82
Query: 431 IAFLLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTL 490
+AF++P IE VL + + L+L PTRELA QI E +L H G+ + +
Sbjct: 83 LAFIIPTIEKVLANRAPRGK-----VSALVLSPTRELARQIQTETHKMLTYHPGLHSMVV 137
Query: 491 VGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKS--GLSVRLMGLKMLVLDEADHLLD 548
GG K + R L IL+ATPGR D + L+ L ++LVLDEAD+LLD
Sbjct: 138 YGGVDVKKNLRALVQKTPDILIATPGRCWDIMTQAHDRSLTTVLDSTRVLVLDEADNLLD 197
Query: 549 LGFRKDVENIVDCLP--RRRQSLLFSATMP------KELVLKREHTYIDTVGLGSVETPV 600
+GFR + I+ LP +RQ+ LFSAT P ++ LKR+H+Y+D VG V T
Sbjct: 198 MGFRPQISKILSALPPTTQRQTFLFSATFPGDVKSLADVALKRKHSYVDAVG-EDVATHE 256
Query: 601 KIKQSCLV-APHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMN-V 658
++ S LV A ++ Q+L LL +H+ PDYKV+VF T +T++ + V
Sbjct: 257 HVEASSLVVAKRDVMLQLLC-LLAQHMAEEPDYKVMVFLPTANLTAMFAEAFSSAGLGGV 315
Query: 659 REMYSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHR 718
E++SRK Q YRD+ S +FRA KRL++ +SDVSARG+DYP V+ VVQ G P +REQYIHR
Sbjct: 316 IEIHSRKSQSYRDKASADFRAGKRLVMFSSDVSARGVDYPGVSYVVQCGAPANREQYIHR 375
Query: 719 LGRTGREGKEGEGVLLLAPWEEYFLDDLKDLPLDKLQLPHLNPEIQL------------- 765
GRTGR G+ G+ LLL+ +E FL+ L DLP+ +L+ L
Sbjct: 376 AGRTGRAGRAGQCTLLLSDFERPFLNKLGDLPIKQLEPLALPLAAGGAALGPALVRDPAG 435
Query: 766 QMDNHMAKIDNNVKEAAYHAWLGYYNSIREIGRDKTTLVELANKF-AQSIGLQRPPPLFR 824
+ + K D + AY ++LGYY S I +V AN++ A+ + PP L
Sbjct: 436 ALARAVEKADYESRARAYQSFLGYYKSHAVIKTRPEQIVAHANEYAAELLACPTPPGLLA 495
Query: 825 KTALKMGLKDIPGIRLRK 842
KT KMGLK + G+ + K
Sbjct: 496 KTVGKMGLKGVAGLVIVK 513
>gi|223994927|ref|XP_002287147.1| RNA helicase [Thalassiosira pseudonana CCMP1335]
gi|220976263|gb|EED94590.1| RNA helicase [Thalassiosira pseudonana CCMP1335]
Length = 576
Score = 304 bits (778), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 199/532 (37%), Positives = 299/532 (56%), Gaps = 57/532 (10%)
Query: 351 IRKEISKNKLNGNGEKKEKREEEPILSQKRFDECGISPLTIKALTAA----GYIQMTRVQ 406
I K+I++ K E ++ +L+ F +C + L + + A G MT VQ
Sbjct: 53 IEKKIAERKAIVESRHNEALQDPTLLTNLSFADC--NELHVHSKRAIVEDLGLQTMTEVQ 110
Query: 407 EATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLVPPIYVLILCPTRE 466
T +A L G D + +A+TGTGK++AFL+PA+E +++ + Q I L++ PTRE
Sbjct: 111 AKTFTAALSGSDVLARARTGTGKTLAFLIPAVERIVRNINFVGGQ---GIGCLVVAPTRE 167
Query: 467 LASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKS 526
LA QI EA LL +H + V + GGT+ D + +LVATPGRLLDH++
Sbjct: 168 LAIQIGEEAEKLLLHHSDLTVQVMYGGTKMARDMHAMNKRLPTVLVATPGRLLDHLQETK 227
Query: 527 GLSVR--------LMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRR--RQSLLFSATMP 576
VR + ++VLDE D LLD+GFR+D++ I+ LPR+ RQ++LFSAT+P
Sbjct: 228 ---VRGRKFSDDVIANTDIVVLDEIDRLLDMGFRRDIQRILSYLPRKEKRQTMLFSATIP 284
Query: 577 KEL------VLKREHTYIDTVGLGSVETP--VKIKQSCLVAPHELHFQILHHLLKEHILG 628
K + LK ++ +D V G TP V++ QS +V + + + +H
Sbjct: 285 KGMKGIMRESLKEDYLEVDCVQDGRDSTPTNVRVTQSHIVLSDMKSVMMSIYTILKHATN 344
Query: 629 TPDYKVIVFCSTGMVTSLLYLLLRE-MKMNVREMYSRKPQLYRDRISEEFRASKRLILVT 687
+ YK++VF T + S L + ++ V E++S+K Q R+ SE FR +K +L T
Sbjct: 345 SKPYKIVVFFPTARMVSFFADFLNDGLEFPVMELHSKKSQSSRNTASENFRQAKNAVLFT 404
Query: 688 SDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLAPWEEYFLDDLK 747
SD+SARG+DYPDVT V+Q+G+P REQYIHRLGRT R GKEG+G+L+L P+E FL +L+
Sbjct: 405 SDLSARGIDYPDVTQVIQIGLPESREQYIHRLGRTARAGKEGDGLLVLFPFEFQFLSELR 464
Query: 748 --DLP--------LDKLQLPHLNPEIQLQMDNHMAKIDN------NVKEAAYHAWLGYY- 790
D+P LD+ + L PE M+ + +++++ + + AY A+LGYY
Sbjct: 465 GLDVPNNNELSSLLDQSSVTEL-PE---WMEQNFSRVNSGGNKLASSAQLAYLAFLGYYL 520
Query: 791 ---NSIREIGRDKTTLVELANKFAQSIGLQRPPPLFRKTALKMGLKDIPGIR 839
+ IR R K +V L+N F+ SIGL P L +K KM L +PG+R
Sbjct: 521 GQMSRIRI--RSKEEVVRLSNDFSDSIGLAHVPALPQKLITKMDLVGVPGVR 570
>gi|328855350|gb|EGG04477.1| hypothetical protein MELLADRAFT_37461 [Melampsora larici-populina
98AG31]
Length = 521
Score = 303 bits (776), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 195/503 (38%), Positives = 293/503 (58%), Gaps = 47/503 (9%)
Query: 368 EKREEEPILSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGT 427
++ E + + S +RF + +S +KA+ + M+ +Q ATL A L G+D + +AKTGT
Sbjct: 4 DQDEPQSLGSTRRFADTALS-TGLKAVIP--FETMSEIQAATLDAVLGGQDVLAQAKTGT 60
Query: 428 GKSIAFLLPAIEAVLKATSSSTTQLVPP---IYVLILCPTRELASQIAAEAIALLKNHDG 484
GK++AFL+PA+E + T +PP I +LI+ PTRELA+QIA E LL+
Sbjct: 61 GKTLAFLVPAVEKLRNLTP------MPPNRQISILIISPTRELAAQIARECQPLLEG-TS 113
Query: 485 IGVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEAD 544
GV +VGGT + +L+++ C +LVATPGRL DH+ N+ GL +L L+ +LDEAD
Sbjct: 114 FGVQCVVGGTNINTEINKLKNNRCDVLVATPGRLKDHLLNQ-GLQGQLRQLRFFILDEAD 172
Query: 545 HLLDLGFRKDVENIVDCLPRRR----QSLLFSATMPKEL------VLKREHTYIDTVGLG 594
LLD+GF+ D++ I+ LP RR QS+LFSAT+P E+ VL H +I T+
Sbjct: 173 RLLDMGFKPDIDQILQTLPDRRSVPRQSMLFSATIPAEVMKVKNAVLLPNHAHISTLKAE 232
Query: 595 SVETPVKIKQSCLVAPHELHFQILHHLLKEHILG-TPDYKVIVFCSTGMVTSL----LYL 649
+ + ++Q ++A HF L ++K+ ++ P K +VF T T L L
Sbjct: 233 DINAHLHVQQDFVIAHLHDHFAALLEIIKQDLITHGPKSKTMVFFPTARATGLGGEVLKY 292
Query: 650 LLREMKMNVREMYSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIP 709
L++ ++ V E++SR Q R + +++F + +LVTSDVS RG+DYP+VT+VVQVG+P
Sbjct: 293 CLKD-RVPVFELHSRIAQGARTKTAKKFSDCESGVLVTSDVSGRGVDYPNVTTVVQVGLP 351
Query: 710 PDREQYIHRLGRTGREGKEGEGVLLLAPWEEYFLD--DLKDLPLDKLQLPHLNPEIQL-- 765
E Y+HRLGRT R G G G+++LAP+E+ FL + +PL PH P I L
Sbjct: 352 MTPEDYVHRLGRTARGGATGRGIIILAPFEQKFLTQGQMSSMPLK----PH--PPIDLDR 405
Query: 766 -QMDNHMAKIDNNVKEAAYHAWLGYYNS-IREIGRDKTTLVELANKFAQSIGLQR----P 819
+ D + +I K+ Y AWLGYY ++ G D LV AN++ + G++
Sbjct: 406 SETDEALDQISEQSKDQTYAAWLGYYKGKMKVCGFDPVGLVRTANEYVRD-GMRYQSDLT 464
Query: 820 PPLFRKTALKMGLKDIPGIRLRK 842
P L KT MGL+ +PG+R+ K
Sbjct: 465 PGLLAKTVGMMGLRGVPGLRIIK 487
>gi|71024463|ref|XP_762461.1| hypothetical protein UM06314.1 [Ustilago maydis 521]
gi|46097710|gb|EAK82943.1| hypothetical protein UM06314.1 [Ustilago maydis 521]
Length = 647
Score = 303 bits (775), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 197/494 (39%), Positives = 281/494 (56%), Gaps = 52/494 (10%)
Query: 394 LTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLV 453
L+A + M+ VQ ATLS L GKD + +AKTGTGK++AFL+P+I +
Sbjct: 128 LSAIPFPTMSAVQAATLSTALSGKDVLAQAKTGTGKTLAFLIPSIHKLCALPKP------ 181
Query: 454 PP---IYVLILCPTRELASQIAAEAIALLKNHDG-IGVLTLVGGTRFKVDQRRLESDPCQ 509
PP I VL+L PTRELA QI EA LL N G GV +VGGT +++RL+ D
Sbjct: 182 PPQTSISVLVLSPTRELALQIEKEAHMLLANLQGTFGVQHVVGGTNIGAERKRLQKDRKD 241
Query: 510 ILVATPGRLLDHIE-NKSGLSVR--LMGLKMLVLDEADHLLDLGFRKDVENIVDCLP--- 563
IL+ATPGRLLDH+ N SGL +R L++LVLDEAD +LD+GFR ++E I+ LP
Sbjct: 242 ILIATPGRLLDHLSSNNSGLDLRRACQNLRVLVLDEADRMLDMGFRNELEKILKMLPDPV 301
Query: 564 -RRRQSLLFSATMPK---ELV-LKREHTYIDTVGLGSVETPVKIKQSCLVAP-HELHFQI 617
RQSL FSAT+P E+ L+ +H +I T+ T + Q L+ + +
Sbjct: 302 ASERQSLFFSATIPSFVHEVAKLRPDHAFISTLTEQDTNTHEHVPQESLICSLRDCLPRA 361
Query: 618 LHHLLKEHILGTPDYKVIVFCSTGMVTSL---LYLLLREMKMN-------VREMYSRKPQ 667
L +L E + ++K++VF T TSL ++ LR K + + E++SRK Q
Sbjct: 362 LQVVLSEAVGYPTNHKILVFLPTARSTSLAAAVFTQLRNQKNSAYAKLGPIFEIHSRKSQ 421
Query: 668 LYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGK 727
R + E F+ IL +SDV+ARG+D P ++ V+Q+G+P EQYIHRLGRT R GK
Sbjct: 422 AVRTKTMETFQTRASGILFSSDVTARGIDIPGISLVLQLGLPSSLEQYIHRLGRTARAGK 481
Query: 728 EGEGVLLLAPWEEYFLD--DLKDLPLDKLQLPHLN-------PEIQLQMDNHMAKIDNNV 778
+G GVL+LA +E +FL+ D+K LP+ KL + + P++ +D M ID+
Sbjct: 482 QGRGVLILADFEAFFLNQQDVKKLPITKLDVAAVETESRVTLPQVATDVDGAMQTIDSTT 541
Query: 779 KEAAYHAWLGYYNS-IREIGRDKTTLVELANKFAQSIGLQRP---------PPLFRKTAL 828
+ AY A LG+Y + ++++ L+ N +A+ I LQ P PPL +KT
Sbjct: 542 RSQAYQAHLGFYKAYLKQLKWTSEQLIASTNDYARHI-LQWPADPSGTWVGPPLLQKTVS 600
Query: 829 KMGLKDIPGIRLRK 842
MGLK PG+ + K
Sbjct: 601 MMGLKGKPGLNIVK 614
>gi|390597661|gb|EIN07060.1| DEAD-domain-containing protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 468
Score = 297 bits (760), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 190/462 (41%), Positives = 262/462 (56%), Gaps = 27/462 (5%)
Query: 398 GYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLVPPIY 457
GY M+ VQ ATL L+GKD + +AKTGTGK++AFL+PAI+ +L + S I
Sbjct: 9 GYTVMSPVQAATLEPILQGKDCLAQAKTGTGKTLAFLIPAIQTLLASPPSQPRS----IR 64
Query: 458 VLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILVATPGR 517
+++ PTRELA QI+ EA L K I + T GGT D R + + P +LVATPGR
Sbjct: 65 AVVISPTRELARQISKEAEVLTKGIPEIRIHTSTGGTNVNTDSRVILTRP-DLLVATPGR 123
Query: 518 LLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLP-RRRQSLLFSATMP 576
L DH+ + L+ L LVLDEAD+L+D GF ++ I+ LP +RQ+LLFSAT+P
Sbjct: 124 LKDHLSDPQRLAC-FGKLDFLVLDEADNLVDQGFYPEIRAIMQTLPPSQRQTLLFSATIP 182
Query: 577 KEL------VLKREHTYIDTVGLGSVETPVKIKQSCLVAP-HELHFQILHHLLKEHILGT 629
E+ +L + +I T+ V T ++ Q+ + AP +EL L L +E
Sbjct: 183 PEVKTIASTILSPGYVHISTISPDDVSTHERVPQTVITAPLNELPALALTLLRQELKKAN 242
Query: 630 PDYKVIVFCSTG----MVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEFRASKRLIL 685
K I F T + L L + + V E++SR Q RD +++ FR K +L
Sbjct: 243 GQVKAIFFYPTARQAQLAAELYSKLSPPLPLPVLEIHSRLSQSKRDNVAKTFREVKSALL 302
Query: 686 VTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLAPWEEYFLDD 745
+SDV+ARGMD+PDVT V Q+G+P +EQYIHR+GRTGR GK G+G LLLAP+E FL +
Sbjct: 303 CSSDVTARGMDFPDVTHVFQIGMPSSQEQYIHRVGRTGRAGKAGQGFLLLAPFETVFLKE 362
Query: 746 LKDLPLDKLQLPHLNPEIQLQMD---NHMAKIDNNVKEAAYHAWLGYY-NSIREIGRDKT 801
+ +P+ P +D M+K++ KE Y AWLG Y S+R++ T
Sbjct: 363 IASIPIT----PGRTAPASTDLDATWKAMSKVNRLTKERTYEAWLGLYKGSLRKLNWKPT 418
Query: 802 TLVELANKFAQSIGLQRPPPLFRKT-ALKMGLKDIPGIRLRK 842
LV+ AN A S L PPL T A KM L D+PG+RL K
Sbjct: 419 QLVQTANDMATSGFLLPEPPLMWTTLARKMNLSDVPGLRLSK 460
>gi|358060114|dbj|GAA94173.1| hypothetical protein E5Q_00821 [Mixia osmundae IAM 14324]
Length = 597
Score = 295 bits (755), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 177/458 (38%), Positives = 271/458 (59%), Gaps = 31/458 (6%)
Query: 403 TRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLVPPIYVLILC 462
T VQ TL L+GKD + +A TGTGK++ FL+P+++ +L+ + + +L++
Sbjct: 102 TEVQAQTLPVALKGKDILARALTGTGKTLGFLIPSLDRLLRNPTRPGQ-----VGILVMS 156
Query: 463 PTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHI 522
PTRELA+Q A A LL + +GV +GG + +RL S +LVATPGRL+DH+
Sbjct: 157 PTRELATQTADAAKQLLSSSPSLGVQLALGGGNVNAELKRLTSQRVDVLVATPGRLIDHL 216
Query: 523 ENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRR----QSLLFSATMPKE 578
N +GL+ RL L+ VLDEAD LL GF++D++ IV LP RR Q+LLFSAT+ +
Sbjct: 217 AN-NGLAPRLNELQTFVLDEADQLLQQGFKQDIDRIVSFLPDRRTVPRQTLLFSATVSPQ 275
Query: 579 ------LVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQ-ILHHLLKEHILGTPD 631
L L +H +I T+ + T ++KQ+ + P E F L +L+E + D
Sbjct: 276 IQQVAKLTLLPDHDFISTIKESDLNTHERVKQTIIEVPFERIFAATLAVILREIQQSSDD 335
Query: 632 YKVIVFCSTGMVTSLLYLLLREMKMNVR--EMYSRKPQLYRDRISEEFRASKRLILVTSD 689
K+++F T T + L ++++ + E++SRK Q R++ +E F+A+++ IL +SD
Sbjct: 336 CKLLLFFPTARATGVAKELFDQIELPLPRWEVHSRKSQSAREKATEAFKAARKGILFSSD 395
Query: 690 VSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLAPWEEYF--LDDLK 747
VSARGMD+PDVT+V+QVG+P EQYIHRLGRT R GKEG G+L+LAP+E F L +K
Sbjct: 396 VSARGMDFPDVTAVIQVGLPASTEQYIHRLGRTARAGKEGRGILILAPYERPFLSLSGIK 455
Query: 748 DLPL--DKLQLPHLNPEIQLQMDNHMAKIDNNVKEAAYHAWLGYYNS-IREIGRDKTTLV 804
LP+ D L Q ++ ++++ N K AY A+LG+ ++ + +V
Sbjct: 456 QLPIKPDPTFTTALYEPYQPTIEQALSRVSNESKGQAYSAYLGFTKGFVKLLQTSAKGVV 515
Query: 805 ELANKFAQSI-------GLQRPPPLFRKTALKMGLKDI 835
+LA ++A ++ G R PPL T KMGL+++
Sbjct: 516 DLAEQYAVNVLLYVPEPGQPRTPPLMASTIGKMGLREL 553
>gi|405121031|gb|AFR95801.1| DEAD-box ATP-dependent RNA helicase 26 [Cryptococcus neoformans
var. grubii H99]
Length = 602
Score = 294 bits (752), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 194/496 (39%), Positives = 275/496 (55%), Gaps = 40/496 (8%)
Query: 376 LSQKRF-DECGISPLTIKALT--AAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIA 432
+ + RF D G+SP +L I + +VQ ATL L G D + +AKTGTGK++A
Sbjct: 58 IDRPRFQDFTGLSPEIFPSLPFETCTEIDLPKVQAATLPTILAGDDVLAQAKTGTGKTLA 117
Query: 433 FLLPAIEAVLKATSSSTTQLVPP---IYVLILCPTRELASQI--AAEAIALLKNHDGIGV 487
FL+P ++ +L A +PP +LIL PTRELA QI AE ++ N G
Sbjct: 118 FLVPVVQHLLSAP-------MPPSALTSILILSPTRELAQQINEVAERMSAALNRK-FGT 169
Query: 488 LTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLL 547
++VGGT D + L+S ILVATPGRLLD +EN G+ R LKM+VLDEAD LL
Sbjct: 170 RSIVGGTNMDRDIKNLKSKRADILVATPGRLLDLMEN-GGIKTRFAQLKMIVLDEADRLL 228
Query: 548 DLGFRKDVENIVDCLPRR----RQSLLFSATMPKE------LVLKREHTYIDTVGLGSVE 597
D GFR+++ I D LP RQ+LLFSAT+P E + LK+++ +I T+ V
Sbjct: 229 DAGFRRELVKIFDYLPAPHVVPRQTLLFSATLPTEVHSIASIALKKDYKFITTLTEEDVN 288
Query: 598 TPVKIKQSCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMN 657
+KQ LV E +++ D+KVI F T +L Y + + ++
Sbjct: 289 AHEHVKQEFLVISAEDLIPATMEVMRNEESKNKDFKVIAFLPTARAAALFYDVFSSLPIS 348
Query: 658 --VREMYSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQY 715
V E++SR Q R +E F ++R +L +SDV+ARG+D VT+VVQ+G+P EQY
Sbjct: 349 YPVWEIHSRLSQSKRASTTEAFHQARRGVLFSSDVTARGIDVKGVTAVVQIGLPSSSEQY 408
Query: 716 IHRLGRTGREGKEGEGVLLLAPWEEYFLDDLKDLPLDKLQ-LPHLNPEIQLQ----MDNH 770
+HRLGRT R G EG G+L+L +E +FL D K L L P + PEI + ++
Sbjct: 409 VHRLGRTARAGAEGHGILMLGDFESHFLRD-KTLQTFTLHPYPTITPEIMSRSRDAVNKA 467
Query: 771 MAKIDNNVKEAAYHAWLGYYNS-IREIGRDKTTLVELANKFAQSIGLQ---RPPPLFRKT 826
+ + K AY AWLGYYNS ++ + + LV A +A+ + L+ PP L KT
Sbjct: 468 LESVSPESKAQAYQAWLGYYNSHLKSLRWSQADLVRHAGDYAR-VSLRNGPEPPGLLAKT 526
Query: 827 ALKMGLKDIPGIRLRK 842
KMGL+ +PG+ + K
Sbjct: 527 VSKMGLRGVPGLNIVK 542
>gi|443894255|dbj|GAC71604.1| hypothetical protein PANT_4d00026 [Pseudozyma antarctica T-34]
Length = 839
Score = 293 bits (751), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 192/494 (38%), Positives = 279/494 (56%), Gaps = 52/494 (10%)
Query: 394 LTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLV 453
L+A + M+ VQ ATLS L G+D + +AKTGTGK++AFL+P+I + +
Sbjct: 90 LSAIPFPTMSAVQAATLSTALSGRDVLAQAKTGTGKTLAFLIPSIHKLCALPTP------ 143
Query: 454 PP---IYVLILCPTRELASQIAAEAIALLKNHDG-IGVLTLVGGTRFKVDQRRLESDPCQ 509
PP I VL+L PTRELA QI EA LL N G GV +VGGT +++RL+ D
Sbjct: 144 PPQSSISVLVLSPTRELALQIEKEAHMLLANLQGTFGVQHVVGGTNIGAERKRLQRDRKD 203
Query: 510 ILVATPGRLLDHIENKS-GLSVR--LMGLKMLVLDEADHLLDLGFRKDVENIVDCLP--- 563
+L+ATPGRLLDH+ + + GL +R LK+LVLDEAD +LD+GFR ++E I+ LP
Sbjct: 204 LLIATPGRLLDHLSSDAPGLDLRKACQNLKVLVLDEADRMLDMGFRNELEKILKMLPDPV 263
Query: 564 -RRRQSLLFSATMPKEL----VLKREHTYIDTVGLGSVETPVKIKQSCLVAP-HELHFQI 617
+RQSL FSAT+P + L+ +H +I T+ T + Q V E +
Sbjct: 264 ASQRQSLFFSATIPSFVHDVAKLRPDHAFISTLTEQDTNTHEHVPQESYVCSLRECLPRA 323
Query: 618 LHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKM----------NVREMYSRKPQ 667
L +L E + ++K++VF T TSL + +++ V E++SRK Q
Sbjct: 324 LQVVLAEAVRYPANHKILVFLPTARSTSLAAAVFSQLRALAGSPYAKLGQVFEIHSRKSQ 383
Query: 668 LYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGK 727
R + E F++S IL +SDV+ARG+D P ++ V+Q+G+P + EQYIHRLGRT R GK
Sbjct: 384 AVRTKTMETFQSSASGILFSSDVTARGIDIPGISLVLQLGLPSNLEQYIHRLGRTARAGK 443
Query: 728 EGEGVLLLAPWEEYFL--DDLKDLPLDKLQLPHLNP-------EIQLQMDNHMAKIDNNV 778
EG GVL+LA +E +FL +D+K LP+ +L + + E+ +D M ID
Sbjct: 444 EGRGVLILADFERFFLGQNDVKRLPITQLNVRAVEAESGVALGEVAQHVDRVMQGIDATT 503
Query: 779 KEAAYHAWLGYYNS-IREIGRDKTTLVELANKFAQSIGLQRP---------PPLFRKTAL 828
+ AY A LG+Y ++++ L++ N +A+ I LQ P PPL +KT
Sbjct: 504 RSQAYQAHLGFYKGYLKQLRWKPEELIDATNDYAKDI-LQWPAQQDGSWVGPPLLQKTVS 562
Query: 829 KMGLKDIPGIRLRK 842
MGLK G+ + K
Sbjct: 563 LMGLKGKRGLHIVK 576
>gi|397634052|gb|EJK71256.1| hypothetical protein THAOC_07324 [Thalassiosira oceanica]
Length = 580
Score = 293 bits (751), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 202/530 (38%), Positives = 291/530 (54%), Gaps = 46/530 (8%)
Query: 351 IRKEISKNKLNGNGEKKEKREEEPI-----LSQKRFDECG-ISPLTIKALTA-AGYIQMT 403
+R I++ K + E R+ + + L+ K F +C I P + +AL G MT
Sbjct: 56 LRPAITEKKRAERKARIESRQADALDDPTLLTDKSFAKCKLIHPSSKRALVEDLGLQSMT 115
Query: 404 RVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLVP--PIYVLIL 461
VQ T+ A L GKD + +AKTGTGK+ AFL+PA+E + VP I LIL
Sbjct: 116 EVQAKTIHAALAGKDILARAKTGTGKTFAFLIPAVERI-----KMNPTYVPGRSICCLIL 170
Query: 462 CPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDH 521
PTRELA QI +A +L +H + V + GGT+ D ILVATPGRLLDH
Sbjct: 171 APTRELAIQIGEQASSLTAHHSDVSVQVMYGGTKMARDMNAFNRRLPSILVATPGRLLDH 230
Query: 522 IENKSGLSVRLMG------LKMLVLDEADHLLDLGFRKDVENIVDCLPRR--RQSLLFSA 573
+ S L R G ++VLDE D LLDLGFR+++E I+ LPR+ RQ++LFSA
Sbjct: 231 LRETS-LRGRKFGDDIMAQTDIVVLDEIDRLLDLGFRREIERILSYLPRKAKRQTMLFSA 289
Query: 574 TMPKEL------VLKREHTYIDTVGLGSVETP--VKIKQSCLVAPHELHF-QILHHLLKE 624
T+PK L L + +D V GS+ +P +++ QS + P F Q + +L +
Sbjct: 290 TIPKGLKRIMQESLNDDFVEVDCVNDGSMSSPTNIRVSQSYTILPCMSSFLQSTYAVLGQ 349
Query: 625 HILGTPDYKVIVFCSTGMVTSLLYLLLRE-MKMNVREMYSRKPQLYRDRISEEFRASKRL 683
P +KV+VF T + L L + V E++S+K Q R SE FR +
Sbjct: 350 ATSENP-FKVVVFLPTARLVGFLAEFLNDGFSCPVLELHSKKTQSARRTASENFRQATSA 408
Query: 684 ILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLAPWEEYFL 743
IL+TSDVSARG+D+PDVT V+Q+G+P RE YIHRLGRT R GKEG+G+L++ P+E
Sbjct: 409 ILLTSDVSARGIDFPDVTQVIQIGLPESRESYIHRLGRTARAGKEGKGLLVMFPFESKAR 468
Query: 744 DDLKDLPL---DKLQ--LPHLNPEIQLQMDNHMAKI---DNNV---KEAAYHAWLGYY-N 791
+LK L + D+++ L MD +++K+ DN + + AY ++LGYY
Sbjct: 469 SELKGLDISRNDRVEKLLEESASSTPEWMDQNLSKLSSGDNKLTRGAQLAYLSFLGYYLG 528
Query: 792 SIREIGRDKTTLVELANKFAQSIGLQRPPPLFRKTALKMGLKDIPGIRLR 841
I K +V +++FA+SIGL P + KMGL+ I G++++
Sbjct: 529 QANRIQSSKDEIVTFSSEFARSIGLVEAPEIPSTLVSKMGLEGIQGVKIK 578
>gi|343428954|emb|CBQ72499.1| related to MSS116-RNA helicase of the DEAD box family,
mitochondrial [Sporisorium reilianum SRZ2]
Length = 645
Score = 292 bits (747), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 192/492 (39%), Positives = 277/492 (56%), Gaps = 52/492 (10%)
Query: 394 LTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLV 453
L+A + M+ VQ ATLS L GKD + +AKTGTGK++AFL+P+I+ +
Sbjct: 113 LSAIPFPTMSAVQAATLSTALAGKDVLAQAKTGTGKTLAFLIPSIQKLCALPKP------ 166
Query: 454 PP---IYVLILCPTRELASQIAAEAIALLKNHDG-IGVLTLVGGTRFKVDQRRLESDPCQ 509
PP I VL+L PTRELA QI EA LL N G V +VGGT +++RL+ D
Sbjct: 167 PPQTSISVLVLSPTRELALQIEKEAQMLLANLQGSFSVQHVVGGTNIGAERKRLQRDRKD 226
Query: 510 ILVATPGRLLDHIENKS-GLSVR--LMGLKMLVLDEADHLLDLGFRKDVENIVDCLP--- 563
+L+ATPGRLLDH+ + + GL +R L++LVLDEAD +LD+GFR ++E I+ LP
Sbjct: 227 LLIATPGRLLDHLTSDAPGLDLRKACQNLRVLVLDEADRMLDMGFRNELEKILKMLPDPI 286
Query: 564 -RRRQSLLFSATMPKEL----VLKREHTYIDTVGLGSVETPVKIKQSCLV-APHELHFQI 617
+RQSL FSAT+P + L+ +H +I T+ T + Q LV A + +
Sbjct: 287 ASQRQSLFFSATIPSFVHDVAKLRPDHAFISTLTEQDTNTHEHVPQESLVCALRDCLPRA 346
Query: 618 LHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMN----------VREMYSRKPQ 667
L +L E I ++K++VF T TSL + +++ + E++SRK Q
Sbjct: 347 LQVVLSEAIRYPSNHKILVFLPTARSTSLAAAVFTQLRNQRGSAYAKLGPIFEIHSRKSQ 406
Query: 668 LYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGK 727
R + E F+ S IL +SDV+ARG+D P ++ V+Q+G+P EQYIHRLGRT R GK
Sbjct: 407 AVRTKTMETFQTSASGILFSSDVTARGIDIPGISLVLQLGLPSSLEQYIHRLGRTARAGK 466
Query: 728 EGEGVLLLAPWEEYFL--DDLKDLPLDKLQLPHLNP-------EIQLQMDNHMAKIDNNV 778
+G GVL+LA +E +FL D+K LP+ +L + + E+ +D M ID
Sbjct: 467 QGRGVLILADFEAFFLTQSDVKKLPITRLDVAPVEAEAGVALGEVTRHVDGAMQAIDATT 526
Query: 779 KEAAYHAWLGYYNS-IREIGRDKTTLVELANKFAQSIGLQRP---------PPLFRKTAL 828
+ AY A LG+Y S ++++ L+ NK+A+ I LQ P PPL +KT
Sbjct: 527 RSQAYQAHLGFYKSYLKQLRWKPEDLIASTNKYARDI-LQWPAGPDGTWVGPPLLQKTVS 585
Query: 829 KMGLKDIPGIRL 840
MGLK G+ +
Sbjct: 586 MMGLKGKSGLNV 597
>gi|134112533|ref|XP_775242.1| hypothetical protein CNBE5150 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50257894|gb|EAL20595.1| hypothetical protein CNBE5150 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 606
Score = 290 bits (741), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 196/496 (39%), Positives = 276/496 (55%), Gaps = 45/496 (9%)
Query: 376 LSQKRF-DECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFL 434
+ + RF D G+SP +L + T VQ ATL L G D + +AKTGTGK++AFL
Sbjct: 66 IDRPRFRDFNGLSPEIFPSLP---FETCTEVQAATLPTILAGDDVLAQAKTGTGKTLAFL 122
Query: 435 LPAIEAVLKATSSSTTQLVPP---IYVLILCPTRELASQI--AAE--AIALLKNHDGIGV 487
+P ++ +L A +PP +LIL PTRELA QI AE + AL K G
Sbjct: 123 VPVVQRLLSAP-------MPPSALTSILILSPTRELAQQINEVAERMSTALSKK---FGT 172
Query: 488 LTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLL 547
++VGGT D + L+S ILVATPGRLLD +EN G+ R LKM+VLDEAD LL
Sbjct: 173 RSVVGGTNMDRDIKNLKSKRADILVATPGRLLDLMEN-GGIKARFAQLKMIVLDEADRLL 231
Query: 548 DLGFRKDVENIVDCLPRR----RQSLLFSATMPKE------LVLKREHTYIDTVGLGSVE 597
D GFR+++ I D LP RQ+LLFSAT+P E + L++++ +I T+ V
Sbjct: 232 DAGFRRELVKIFDYLPAPHAVPRQTLLFSATLPTEVHSIASIALRKDYKFITTLTEEDVN 291
Query: 598 TPVKIKQSCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMN 657
+KQ LV E +++ D+KVI F T +L + + + +
Sbjct: 292 AHEHVKQEVLVVSAEDLIPAAMEVMRNEESKNKDFKVIAFLPTARAAALFHDVFSSLPIP 351
Query: 658 --VREMYSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQY 715
V E++SR Q R +E FR ++R +L +SDV+ARG+D VT+VVQ+G+P EQY
Sbjct: 352 YPVWEIHSRLSQSKRASTTEAFRQAERGVLFSSDVTARGIDVKGVTAVVQIGLPSSSEQY 411
Query: 716 IHRLGRTGREGKEGEGVLLLAPWEEYFLDDLKDLPLDKLQ-LPHLNPEIQLQMDNHMAK- 773
+HRLGRT R G EG G+L+L +E +FL D K L L P + PEI + + + K
Sbjct: 412 VHRLGRTARAGAEGHGILMLGDFESHFLRD-KTLQTFTLHPYPTIAPEIMSRSRDAVNKA 470
Query: 774 ---IDNNVKEAAYHAWLGYYNS-IREIGRDKTTLVELANKFAQSIGLQ---RPPPLFRKT 826
+ K AY AWLGYYNS ++ + + LV A +A+ + L+ +PP L KT
Sbjct: 471 LEFVSPESKAQAYQAWLGYYNSHLKSLRWSQADLVRHAGDYAR-VSLRNGSQPPGLLAKT 529
Query: 827 ALKMGLKDIPGIRLRK 842
KMGL+ +PG+ + K
Sbjct: 530 VSKMGLRGVPGLNIVK 545
>gi|58268036|ref|XP_571174.1| hypothetical protein [Cryptococcus neoformans var. neoformans
JEC21]
gi|57227408|gb|AAW43867.1| conserved hypothetical protein [Cryptococcus neoformans var.
neoformans JEC21]
Length = 606
Score = 289 bits (740), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 193/495 (38%), Positives = 273/495 (55%), Gaps = 43/495 (8%)
Query: 376 LSQKRF-DECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFL 434
+ + RF D G+SP +L + T VQ ATL L G D + +AKTGTGK++AFL
Sbjct: 66 IDRPRFRDFNGLSPEIFPSLP---FETCTEVQAATLPTILAGDDVLAQAKTGTGKTLAFL 122
Query: 435 LPAIEAVLKATSSSTTQLVPP---IYVLILCPTRELASQI--AAE--AIALLKNHDGIGV 487
+P ++ +L A +PP +LIL PTRELA QI AE + AL K G
Sbjct: 123 VPVVQRLLSAP-------MPPSALTSILILSPTRELAQQINEVAERMSTALSKK---FGT 172
Query: 488 LTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLL 547
++VGGT D + L+S ILVATPGRLLD +EN G+ R LKM+VLDEAD LL
Sbjct: 173 RSVVGGTNMDRDIKNLKSKRADILVATPGRLLDLMEN-GGIKARFAQLKMIVLDEADRLL 231
Query: 548 DLGFRKDVENIVDCLPRR----RQSLLFSATMPKE------LVLKREHTYIDTVGLGSVE 597
D GFR+++ I D LP RQ+LLFSAT+P E + L++++ +I T+ V
Sbjct: 232 DAGFRRELVKIFDYLPAPHAVPRQTLLFSATLPTEVHSIASIALRKDYKFITTLTEEDVN 291
Query: 598 TPVKIKQSCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMN 657
+KQ LV E +++ D+KVI F T +L + + + +
Sbjct: 292 AHEHVKQEVLVVSAEDLIPAAMEVMRNEESKNKDFKVIAFLPTARAAALFHDVFSSLPIP 351
Query: 658 --VREMYSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQY 715
V E++SR Q R +E FR ++R +L +SDV+ARG+D VT+VVQ+G+P EQY
Sbjct: 352 YPVWEIHSRLSQSKRASTTEAFRQAERGVLFSSDVTARGIDVKGVTAVVQIGLPSSSEQY 411
Query: 716 IHRLGRTGREGKEGEGVLLLAPWEEYFLDDLKDLPLDKLQLPHLNPEIQLQMDNHMAK-- 773
+HRLGRT R G EG G+L+L +E +FL D P + PEI + + + K
Sbjct: 412 VHRLGRTARAGAEGHGILMLGDFESHFLRDKTLQTFTLHPYPTIAPEIMSRSRDAVNKAL 471
Query: 774 --IDNNVKEAAYHAWLGYYNS-IREIGRDKTTLVELANKFAQSIGLQ---RPPPLFRKTA 827
+ K AY AWLGYYNS ++ + + LV A +A+ + L+ +PP L KT
Sbjct: 472 EFVSPESKAQAYQAWLGYYNSHLKSLRWSQADLVRHAGDYAR-VSLRNGPQPPGLLAKTV 530
Query: 828 LKMGLKDIPGIRLRK 842
KMGL+ +PG+ + K
Sbjct: 531 SKMGLRGVPGLNIVK 545
>gi|336367848|gb|EGN96192.1| hypothetical protein SERLA73DRAFT_94250 [Serpula lacrymans var.
lacrymans S7.3]
Length = 528
Score = 288 bits (738), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 194/511 (37%), Positives = 285/511 (55%), Gaps = 36/511 (7%)
Query: 354 EISKNKLNGNGEKKEKREEEPI-LSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSA 412
+ + N+ NG G + + + LS RF + +P++ + + +T VQEATL
Sbjct: 24 QTAPNQTNGQGGQVDAMDTSRTHLSTMRFRD---APISNASKAGIKHEFLTDVQEATLKL 80
Query: 413 CLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLVPP--IYVLILCPTRELASQ 470
L G D +V+AKTGTGK++AFLLPAIE + K Q +P I +L++ PTRELA Q
Sbjct: 81 GLSGIDLLVQAKTGTGKTVAFLLPAIERLEK-------QNLPQDKISILVISPTRELALQ 133
Query: 471 IAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSV 530
I EA L+ H + V +GGT ++ R+ S C ILVATPGRL+DH+++ + L
Sbjct: 134 IEKEARDLIA-HRQLCVQNAIGGTNINKEKSRIFSQRCDILVATPGRLIDHLQSNN-LKP 191
Query: 531 RLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRR----QSLLFSATMPKE------LV 580
RL L+ L+LDEAD LLD GF++D+E I LP RR Q +L+SAT+ +E L
Sbjct: 192 RLSNLQTLILDEADRLLDQGFKRDLETIFSFLPDRRHVPRQCMLYSATLSQEIKQIASLY 251
Query: 581 LKREHTYIDTVGLGSVETPVKIKQSCLVAP-HELHFQILHHLLKEHILGTPDYKVIVFCS 639
L H ++ T+ G T Q +AP ++H + LL + K I+FC+
Sbjct: 252 LHSNHKFVSTLTEGETNTHKHAAQFYAIAPMSDIHPATISILLSDAAAHPGSSKTIIFCT 311
Query: 640 TGMVTSLLYLLLREMKMN----VREMYSRKPQLYRDRISEEFRASKRLILVTSDVSARGM 695
T T+ + R+ + V E++SR Q R + ++ F+++ +L +SDV+ARGM
Sbjct: 312 TARATAFAAEVARQAGGSQMPQVFEIHSRMSQNARIKSADAFKSATSAVLFSSDVTARGM 371
Query: 696 DYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLAPWEEYFLD--DLKDLPLDK 753
D+P VT V+QVG+P EQYIHRLGRT R G G G+LLL+P E YFL ++ LP+
Sbjct: 372 DFPGVTLVLQVGLPSSAEQYIHRLGRTARAGAGGRGILLLSPPETYFLAKREMSALPITP 431
Query: 754 LQLPHLNPEIQLQMDNHMAKIDNNVKEAAYHAWLGYYNS-IREIGRDKTTLVELANKFAQ 812
E++ + +D +K Y AWLG+Y S + + LV ANK+A+
Sbjct: 432 YTSTLSLDELRTVTNTVTTGLDPKIKGQTYAAWLGFYKSYCKPMKWSPAQLVIEANKYAR 491
Query: 813 SI-GLQ--RPPPLFRKTALKMGLKDIPGIRL 840
+ G + PPPL R+T MGLK +PG+ +
Sbjct: 492 EVLGWEGKLPPPLARRTVGMMGLKGVPGLNI 522
>gi|336380579|gb|EGO21732.1| hypothetical protein SERLADRAFT_474546 [Serpula lacrymans var.
lacrymans S7.9]
Length = 555
Score = 288 bits (738), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 194/511 (37%), Positives = 285/511 (55%), Gaps = 36/511 (7%)
Query: 354 EISKNKLNGNGEKKEKREEEPI-LSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSA 412
+ + N+ NG G + + + LS RF + +P++ + + +T VQEATL
Sbjct: 51 QTAPNQTNGQGGQVDAMDTSRTHLSTMRFRD---APISNASKAGIKHEFLTDVQEATLKL 107
Query: 413 CLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLVPP--IYVLILCPTRELASQ 470
L G D +V+AKTGTGK++AFLLPAIE + K Q +P I +L++ PTRELA Q
Sbjct: 108 GLSGIDLLVQAKTGTGKTVAFLLPAIERLEK-------QNLPQDKISILVISPTRELALQ 160
Query: 471 IAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSV 530
I EA L+ H + V +GGT ++ R+ S C ILVATPGRL+DH+++ + L
Sbjct: 161 IEKEARDLIA-HRQLCVQNAIGGTNINKEKSRIFSQRCDILVATPGRLIDHLQSNN-LKP 218
Query: 531 RLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRR----QSLLFSATMPKE------LV 580
RL L+ L+LDEAD LLD GF++D+E I LP RR Q +L+SAT+ +E L
Sbjct: 219 RLSNLQTLILDEADRLLDQGFKRDLETIFSFLPDRRHVPRQCMLYSATLSQEIKQIASLY 278
Query: 581 LKREHTYIDTVGLGSVETPVKIKQSCLVAP-HELHFQILHHLLKEHILGTPDYKVIVFCS 639
L H ++ T+ G T Q +AP ++H + LL + K I+FC+
Sbjct: 279 LHSNHKFVSTLTEGETNTHKHAAQFYAIAPMSDIHPATISILLSDAAAHPGSSKTIIFCT 338
Query: 640 TGMVTSLLYLLLREMKMN----VREMYSRKPQLYRDRISEEFRASKRLILVTSDVSARGM 695
T T+ + R+ + V E++SR Q R + ++ F+++ +L +SDV+ARGM
Sbjct: 339 TARATAFAAEVARQAGGSQMPQVFEIHSRMSQNARIKSADAFKSATSAVLFSSDVTARGM 398
Query: 696 DYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLAPWEEYFLD--DLKDLPLDK 753
D+P VT V+QVG+P EQYIHRLGRT R G G G+LLL+P E YFL ++ LP+
Sbjct: 399 DFPGVTLVLQVGLPSSAEQYIHRLGRTARAGAGGRGILLLSPPETYFLAKREMSALPITP 458
Query: 754 LQLPHLNPEIQLQMDNHMAKIDNNVKEAAYHAWLGYYNS-IREIGRDKTTLVELANKFAQ 812
E++ + +D +K Y AWLG+Y S + + LV ANK+A+
Sbjct: 459 YTSTLSLDELRTVTNTVTTGLDPKIKGQTYAAWLGFYKSYCKPMKWSPAQLVIEANKYAR 518
Query: 813 SI-GLQ--RPPPLFRKTALKMGLKDIPGIRL 840
+ G + PPPL R+T MGLK +PG+ +
Sbjct: 519 EVLGWEGKLPPPLARRTVGMMGLKGVPGLNI 549
>gi|388857878|emb|CCF48543.1| related to MSS116-RNA helicase of the DEAD box family,
mitochondrial [Ustilago hordei]
Length = 640
Score = 288 bits (737), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 198/502 (39%), Positives = 276/502 (54%), Gaps = 67/502 (13%)
Query: 394 LTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLV 453
L+A + M+ VQ ATLS L GKD + +AKTGTGK++AFL+P+I+ +
Sbjct: 116 LSAIPFPTMSAVQAATLSTALSGKDVLAQAKTGTGKTLAFLIPSIQKLCALPKP------ 169
Query: 454 PP---IYVLILCPTRELASQIAAEAIALLKNHDG-IGVLTLVGGTRFKVDQRRLESDPCQ 509
PP I VL+L PTRELA QI EA LL N G V +VGGT +++RL+ D
Sbjct: 170 PPQRSISVLVLSPTRELALQIEKEAQMLLANLQGTFAVQHVVGGTNIGAERKRLQRDRKD 229
Query: 510 ILVATPGRLLDHIENKS-GLSVR--LMGLKMLVLDEADHLLDLGFRKDVENIVDCLP--- 563
+L+ATPGRLLDH + + GL +R LK+LVLDEAD +LD+GFR ++E I+ LP
Sbjct: 230 LLIATPGRLLDHFASDAPGLDLRKACQNLKVLVLDEADRMLDMGFRNELEKILKMLPDPI 289
Query: 564 -RRRQSLLFSATMPK---ELV-LKREHTYIDTVGLGSVETPVKIKQSCLVA------PHE 612
RQSL FSAT+P E+ L+ +H +I T+ T + Q L+ PH
Sbjct: 290 SSNRQSLFFSATIPSFVHEVAKLRPDHAFISTLTEQDSNTHEHVPQESLICALRDCLPHA 349
Query: 613 LHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSL---LYLLLREMKMN-------VREMY 662
L +L E I ++K++VF T TSL L+ LR K + + E++
Sbjct: 350 LQV-----VLSEAIRYPTNHKILVFLPTARSTSLAAALFSSLRSQKGSMYSKFSPIFEIH 404
Query: 663 SRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRT 722
SRK Q R R E F+ S IL +SDV+ARG+D P ++ V+Q+G+P EQYIHRLGRT
Sbjct: 405 SRKAQAIRTRTMETFQTSPSGILFSSDVTARGIDIPGISLVLQLGLPSSLEQYIHRLGRT 464
Query: 723 GREGKEGEGVLLLAPWEEYFLD--DLKDLPLDKLQLPHLNPE-------IQLQMDNHMAK 773
R GKEG GVL+LA +E++FL D+K LP+ L L + E + ++ M
Sbjct: 465 ARAGKEGRGVLILAEFEKFFLQQADVKKLPITPLDLGRVEKESGVGLEDVARDVEQAMRG 524
Query: 774 IDNNVKEAAYHAWLGYYNS-IREIGRDKTTLVELANKFAQSIGLQ--------------R 818
ID + AY A LG+Y S ++++ L+ N++A+ I LQ
Sbjct: 525 IDATTRSQAYQAHLGFYKSYLKQLKWKPEELISSTNEYARDI-LQWGSDGQGSGNGGGWV 583
Query: 819 PPPLFRKTALKMGLKDIPGIRL 840
PPL +KT MGLK G+ +
Sbjct: 584 GPPLLQKTVSMMGLKGKSGLNV 605
>gi|170103060|ref|XP_001882745.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164642116|gb|EDR06373.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 444
Score = 287 bits (735), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 182/453 (40%), Positives = 268/453 (59%), Gaps = 30/453 (6%)
Query: 408 ATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLVPPIYVLILCPTREL 467
ATL L G D +V+AKTGTGK+IAFLLPAIE +LKA ++ + +L+L PTREL
Sbjct: 2 ATLDLALAGNDLLVQAKTGTGKTIAFLLPAIERLLKAPVNTRRG----VSILVLSPTREL 57
Query: 468 ASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSG 527
A QI EA LL +H V +GGT + +RL + PC ILVATPGRLLDH+ + S
Sbjct: 58 ALQIQKEAETLLAHHT-FSVQHAIGGTNQTAELKRLINSPCDILVATPGRLLDHLRSSS- 115
Query: 528 LSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRR--RQSLLFSATMPKEL------ 579
L RL LK +V DEAD LLD GF+ ++ I LP R RQ+LLFSAT+ KE+
Sbjct: 116 LPDRLSELKTIVYDEADRLLDQGFKPALDAISGFLPPRHTRQALLFSATVSKEIKAVAAG 175
Query: 580 VLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILHHLLKEHILGTP-DYKVIVFC 638
L+ ++++ T+ T ++Q+ ++ P ++++ +L P K +VF
Sbjct: 176 ALRPGYSFVSTLLEDETNTHEHVEQTYIITPQANFISTAVSIIQQDMLAHPGSSKCMVFF 235
Query: 639 STGMVTSLLYLLLREMK--MNVREMYSRKPQLYRDRISEEFRASKRLILVTSDVSARGMD 696
T LL ++ + E++SRK Q R + ++ F+ +K +L++SDV+ARGMD
Sbjct: 236 PTARQVGFARELLSQLDGLPPILEIHSRKSQPARIKAADAFKVAKSAVLLSSDVAARGMD 295
Query: 697 YPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLAPWEEYFLDD--LKDLPLDKL 754
+P VT V+QVG+P + +QYIHRLGRT R G G G+LLL+ E++FL ++D+PL
Sbjct: 296 FPGVTLVLQVGLPANSDQYIHRLGRTARAGAAGRGILLLSSPEKFFLGTPGMRDIPLTPA 355
Query: 755 QLPHLNPEIQLQMDNHMAKIDNNVKEAAYHAWLGYYNSI-REIGRDKTTLVELANKFA-Q 812
+P I L ++N + +KE AY AWLGYYN + +G K LVE A+++A +
Sbjct: 356 PVP--PSSIPLSLEN----VAREMKEQAYRAWLGYYNGYSKAMGMSKQELVEAASEYAVE 409
Query: 813 SIGLQR---PPPLFRKTALKMGLKDIPGIRLRK 842
++G + PP L + MGLK + G+ +++
Sbjct: 410 ALGWTKGELPPGLEPRAVGMMGLKGVKGLNIQR 442
>gi|328767710|gb|EGF77759.1| hypothetical protein BATDEDRAFT_2048 [Batrachochytrium
dendrobatidis JAM81]
Length = 384
Score = 287 bits (735), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 164/381 (43%), Positives = 237/381 (62%), Gaps = 13/381 (3%)
Query: 381 FDECGISPLTIKAL-TAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIE 439
F +S T+ AL Y M+ VQE LS D +V+AKTGTGK++AFL+ A+E
Sbjct: 9 FSSLNLSSSTMTALENNFKYKNMSTVQERVLSLLPTDADLLVRAKTGTGKTLAFLIAAVE 68
Query: 440 AVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVD 499
+V+ S P + +LIL PTRELA QIA EA +L+ V + VGG +
Sbjct: 69 SVISRFKSRP----PGVPILILSPTRELALQIAREAESLVSPRRW-RVASAVGGESRGKN 123
Query: 500 QRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIV 559
R + C ILVATPGRL D + N+ + +L GLKMLV DEAD LLD+GF K++++I
Sbjct: 124 IREITQFNCDILVATPGRLNDLLNNEPAVRKQLQGLKMLVYDEADILLDMGFTKEIQDIN 183
Query: 560 DCLPRRRQSLLFSATMPKEL------VLKREHTYIDTVGLGSVETPVKIKQSCLVAPHEL 613
LP+ RQ+ +FSAT+ KE+ L+ +H +IDTV +T +KIKQ+ +V PH
Sbjct: 184 FNLPKERQTYMFSATISKEVRSIASTTLRPDHVFIDTVPSNENDTHLKIKQTHVVGPHSQ 243
Query: 614 HFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK-MNVREMYSRKPQLYRDR 672
+LH ++ +H T + K++VF +T T+ + + M+V +++S+ Q R R
Sbjct: 244 TLALLHDVITKHRESTLNSKILVFFNTTKTTNFSTDVFNNLDGMDVLQIHSKLTQQQRSR 303
Query: 673 ISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGV 732
+++ +R ++ IL T+DVSARG+DYP +T V+QVG PP REQYIHR+GRTGR GK GE
Sbjct: 304 VADRYRRAQSAILFTTDVSARGVDYPGITLVIQVGPPPSREQYIHRIGRTGRAGKSGEST 363
Query: 733 LLLAPWEEYFLDDLKDLPLDK 753
L+L+ ++++FLD L DLP+ K
Sbjct: 364 LILSTYDKHFLDQLFDLPIQK 384
>gi|393242285|gb|EJD49804.1| DEAD-domain-containing protein [Auricularia delicata TFB-10046 SS5]
Length = 611
Score = 287 bits (734), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 185/475 (38%), Positives = 266/475 (56%), Gaps = 50/475 (10%)
Query: 402 MTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLVPP---IYV 458
M+ +Q T+ LEGKD + +AKTGTGK++AFLLP ++ +L+ PP I
Sbjct: 126 MSEIQAKTVDIGLEGKDILGQAKTGTGKTVAFLLPIVQKILEKP--------PPHGSIAA 177
Query: 459 LILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILVATPGRL 518
LIL PTRELA QIA E LL++ + V T+VGGT D + L + C ILV TPGR+
Sbjct: 178 LILSPTRELAFQIAKECTPLLRSTH-LNVRTVVGGTNVNTDLKNLAAG-CDILVGTPGRV 235
Query: 519 LDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRR----RQSLLFSAT 574
DH++N L RL L+ VLDEAD LLD+GF D+ I+ LP R RQS+LFSAT
Sbjct: 236 KDHLQNMK-LGDRLKNLQAFVLDEADRLLDMGFSPDIRTIISFLPDRAVVPRQSMLFSAT 294
Query: 575 MP------KELVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILHHLLKEHIL- 627
MP K +VL +H ++ T+ + ++Q + AP + HF +L H +++ I
Sbjct: 295 MPENVVKIKNMVLLPDHAHVSTIDPEEANAHLHVEQHYIAAPLDAHFPLLLHFIRDDIRK 354
Query: 628 GTPDYKVIVFCSTGMVTSLLYLLLREM--------KMNVREMYSRKPQLYRDRISEEFRA 679
K++ F T + LL+ + ++ V E +SR Q R + ++ F+
Sbjct: 355 HGAKSKIMAFYPTARGAEIASDLLKGLDHAAAFGAQLKVFEQHSRLSQSARTKSADGFKV 414
Query: 680 SKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLAPWE 739
++ I+ TSDVS RGMD+P+VT V+Q+G P E Y+HRLGRT R G G G+L+LAP++
Sbjct: 415 AEGGIMATSDVSGRGMDFPNVTLVLQMGPPASGEDYVHRLGRTARAGASGYGILVLAPFD 474
Query: 740 EYFLD-------DLKDLPLDKLQLP---HLNPEIQLQMDNHMAKIDNNVKEAAYHAWLGY 789
+ FL LK LP + L L P + +D+ +D K AY A LG
Sbjct: 475 QGFLRFKGMDKMPLKPLPDQEKALAAARELRPAVDAALDS---AVDEATKAKAYSAMLGL 531
Query: 790 YNSI-REIGRDKTTLVELANKFAQSIGL---QRPPPLFRKTALKMGLKDIPGIRL 840
Y S R G +VE+AN +A+ + L ++PPP+ + TA KMGL+ +PG+ L
Sbjct: 532 YASGNRFSGLKSPQVVEMANGYARDVLLWPGEKPPPVKKSTAGKMGLRGVPGLNL 586
>gi|402224794|gb|EJU04856.1| DEAD-domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 583
Score = 287 bits (734), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 192/475 (40%), Positives = 277/475 (58%), Gaps = 46/475 (9%)
Query: 403 TRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLVPP---IYVL 459
T VQE TL LEGKD +AKTGTGK+IAFL+P+I+ + + + VPP I +L
Sbjct: 96 TEVQEKTLKPILEGKDVFGQAKTGTGKTIAFLVPSIDRLAR-------KPVPPPGIISIL 148
Query: 460 ILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILVATPGRLL 519
+L PTREL QI AEA LL+ + +GG KV + L IL+ATPGRL+
Sbjct: 149 VLAPTRELCLQIEAEANMLLEG-SLYRAQSAIGGVNIKVQRNNLLLKRSDILIATPGRLV 207
Query: 520 DHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCL-PR-RRQSLLFSATMPK 577
DHIEN S L+ RL ++ +LDEAD LLD GF+K + I + P+ +RQ+LLFSAT+ K
Sbjct: 208 DHIEN-SNLTPRLRTVQTFILDEADRLLDQGFQKSILQIARAITPKDQRQTLLFSATVDK 266
Query: 578 EL------VLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILHHLLKEHILGTPD 631
++ VLK++H +I T+G T + Q ++AP +L LL++ + +P
Sbjct: 267 QIREISNVVLKQQHEFISTIGEEEEATHKHVAQDYIIAPLAKIDAVLLTLLRQAV-ESPF 325
Query: 632 YKVIVFCSTGMVTSLLYLLLREM----KMNVREMYSRKPQLYRDRISEEFRASKRLILVT 687
K+IVF ST ++ Y L R + + + EM+SR Q R + ++ FR + + IL +
Sbjct: 326 TKIIVFFSTARGAAIAYDLFRAIPDLEQAPMFEMHSRMSQGARVKQADGFRETMKGILFS 385
Query: 688 SDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLAPW-EEYFLD-- 744
SDV+ARGMD+P +T+V QVG+P EQYIHRLGRT R G +G G+L+L+ + EE FL
Sbjct: 386 SDVTARGMDFPGITAVYQVGMPSSPEQYIHRLGRTARAGAQGHGILILSDFEEEAFLSKK 445
Query: 745 DLKDLPL------DKL---QLPHLNPEIQLQMDNHMAKIDNNVKEAAYHAWLGYYNSIRE 795
++++LPL D+L Q P ++ + A +++ K AY AW+GYYNS +
Sbjct: 446 EIRELPLKRHAGSDELVDEQSPAFKSAQEMVSQTYQA-MESVSKAQAYQAWMGYYNSYLK 504
Query: 796 IGR-DKTTLVELANKFAQSI-------GLQRPPPLFRKTALKMGLKDIPGIRLRK 842
+ R K LV+ AN +A ++ G PPL KT MGLK + G+ + K
Sbjct: 505 VLRWTKQDLVQRANDYAMNVLKYQCPDGSNNTPPLLPKTVGMMGLKGVLGLNIVK 559
>gi|323446433|gb|EGB02597.1| hypothetical protein AURANDRAFT_35093 [Aureococcus anophagefferens]
Length = 465
Score = 285 bits (730), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 189/464 (40%), Positives = 258/464 (55%), Gaps = 53/464 (11%)
Query: 376 LSQKRFD--ECGISPLTIKALTAA-GYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIA 432
++ RFD +S T+KA+ GY MT+VQE L C G+D V KAKTGTGK++A
Sbjct: 1 MTAARFDGYRGVVSDGTLKAIAEVLGYETMTKVQEQALPVCTRGRDVVAKAKTGTGKTLA 60
Query: 433 FLLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVG 492
F++P ++ +A +S + I L+L PTRELA Q E LL + G+ + +VG
Sbjct: 61 FMIPCVD---RAAASKAKRGGSKISALVLSPTRELAQQTLEEG-RLLSHFHGLTLACVVG 116
Query: 493 GTRFKVDQRRLESDPCQ----ILVATPGRLLDHIENKSGLSV-RLMGLKMLVLDEADHLL 547
GT K D R L P ILVATPGRL DH+EN +G + L GL+ LV DEAD LL
Sbjct: 117 GTPIKKDYRALGCAPGSRAPDILVATPGRLNDHLENSAGFARDTLGGLECLVFDEADQLL 176
Query: 548 DLGFRKDVENIVDCLPRRR---QSLLFSATMPKE------LVLK--REHTYIDTVGLGSV 596
D+GFR +E ++ + R Q+LLFSAT+P + L +K ++ ++DTVG
Sbjct: 177 DMGFRPAIEQMLRAIQATRLTRQTLLFSATLPADVKGIAKLSMKDGSDYDFVDTVGDADE 236
Query: 597 ETPVKIKQSCLVAP-HELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREM- 654
+T + Q C+V +LH L L + PD+KVIVF +T +T L LL +
Sbjct: 237 QTHSHVPQCCVVCEGKKLHSAELVARLADAC-SAPDHKVIVFFTTARLTQLYSELLVGLQ 295
Query: 655 ---------------KMNVREMYSRKPQLYRDRISEEFR-ASKRLILVTSDVSARGMDYP 698
K + E++SRK Q +R ++++ FR A+ L TSDVSARGMDYP
Sbjct: 296 GAQARGQAPDLAFLAKTRILEIHSRKSQSHRTKVADAFRDATGGCCLFTSDVSARGMDYP 355
Query: 699 DVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLAPWEEYFLDD--LKDLPLDKLQL 756
DVT VVQ G P D QY+HRLGRT R GKEG G LLL+ +E YFL+D +K LP+ +Q
Sbjct: 356 DVTRVVQFGAPADAAQYVHRLGRTARAGKEGSGCLLLSDFEAYFLEDKAIKALPI-AMQR 414
Query: 757 PHLNPE--------IQLQMDNHMAKIDNNVKEAAYHAWLGYYNS 792
P + + + + + AAY AWLG+YNS
Sbjct: 415 PLVAGDATGAVLGRVDAALMGAARALPPETCGAAYQAWLGFYNS 458
>gi|440794209|gb|ELR15376.1| DEADbox ATP-dependent RNA helicase 31, putative [Acanthamoeba
castellanii str. Neff]
Length = 463
Score = 285 bits (728), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 185/466 (39%), Positives = 260/466 (55%), Gaps = 28/466 (6%)
Query: 402 MTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLVPPIYVLIL 461
MTRVQ A+L L+GKD +V KTGTGK++AFL+PA+E + +A + I VLI+
Sbjct: 1 MTRVQRASLPVLLQGKDGLVAGKTGTGKTLAFLVPAVELLRRAGVDPAQR---AISVLII 57
Query: 462 CPTRELAS------QIAAEAIALLKNHDG-IGVLTLVGGTRFKVDQRRLESDPC-QILVA 513
PTREL S Q EA L G I V ++GG F +++ ++ P ILV
Sbjct: 58 SPTRELGSIHAAAMQTVKEAWMLAGGPRGDIKVGCVMGGRDFLAERQEMQDAPAIHILVC 117
Query: 514 TPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLP--RRRQSLLF 571
T GRLLDH++ L RL L+ML+LDEAD L+ F +++ I+ LP RRQ+LLF
Sbjct: 118 TVGRLLDHLKKDDALRTRLADLRMLILDEADTLMQTTFEQEMGEILTFLPPADRRQTLLF 177
Query: 572 SATMPKEL----VLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILHHLLKEHIL 627
SAT+P + +++ ++T +D V T V Q LV P + ++ LL H
Sbjct: 178 SATIPSTIPVEGLIREDYTLVDAVDKSDAITNVNATQQYLVVPLADTVRAIYSLLLHHTT 237
Query: 628 GTPDYKVIVFCSTGMVTSLLYLLLREM-KMNVREMYSRKPQLYRDRISEEFRASKRLILV 686
YK++VF +T +T + +L ++ + E++SR+ Q R S++FR +IL
Sbjct: 238 TNARYKILVFFATARLTQFMSMLFTQVFHIPTLEIHSRRAQDKRTATSDDFRKQDNVILF 297
Query: 687 TSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLAPWEEYFLDDL 746
+SDVSARGMDY DVT V+QVG +REQYIHRLGRT R GKEG G+LLLAP +E FL L
Sbjct: 298 SSDVSARGMDYEDVTFVLQVGRASNREQYIHRLGRTARAGKEGYGLLLLAPHDESFLAAL 357
Query: 747 KDLPLDKLQLPHLN-----PEIQLQMDNHMAKIDNNVKE---AAYHAWLGYYNSI-REIG 797
DLP+ P + PE ++ +K AY +WLG+YNS +++
Sbjct: 358 HDLPILPTTAPAAHGDTPLPETMVEEWKRGVHRRGELKSRAVQAYQSWLGFYNSHKKQLD 417
Query: 798 RDKTTLVELANKFA-QSIGLQRPPPLFRKTALKMGLKDIPGIRLRK 842
DK LV A FA + + PP + A KMGL D+ + +K
Sbjct: 418 WDKERLVAEAALFAVECLKFAAPPAILHSIAKKMGLGDVSSLPTKK 463
>gi|389739541|gb|EIM80734.1| DEAD-domain-containing protein [Stereum hirsutum FP-91666 SS1]
Length = 1206
Score = 283 bits (724), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 190/477 (39%), Positives = 265/477 (55%), Gaps = 43/477 (9%)
Query: 391 IKALT-AAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSST 449
I A+T GY MT VQEAT+ L+GKD + KAKTGTGK+IAFL+P+I+A+L+ T
Sbjct: 106 ISAITDGLGYQTMTAVQEATIRPLLDGKDCLAKAKTGTGKTIAFLVPSIQAILQNTD--V 163
Query: 450 TQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRR-LESDPC 508
T+ + LI+ PTRELA QIA EA ALL N+ I V T +GGT K + L +
Sbjct: 164 TKNATHVRTLIISPTRELAMQIATEAKALLTNYPKIRVQTFIGGTNMKTETNSFLGHNTP 223
Query: 509 QILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLP----R 564
QI+VATPGRL DH+ + + R + L LDEAD LL+ GF+ +++ I LP
Sbjct: 224 QIVVATPGRLQDHLSSNPEIKARFQAVDFLTLDEADRLLEQGFKSEIDQIQSHLPSPSQH 283
Query: 565 RRQSLLFSATMPKEL------VLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQIL 618
RQ+L FSAT+P + +L + I TV V+T +I Q L A E
Sbjct: 284 PRQTLFFSATVPPRVTALCQQLLAPGYRTISTVSEDDVDTHSRIPQFVLSASIEDQIPAT 343
Query: 619 HHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK------MNVREMYSRKPQLYRDR 672
L+ + P K ++F T T + + + + E++SRK Q R +
Sbjct: 344 LALITKLKAEGP-VKAVLFYPTARGTGVAHDTFTSLARPPIPASSCFEIHSRKSQSNRTK 402
Query: 673 ISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGV 732
+E F+ +++ +L +SDVSARGMD+P+VT V+QVG+P E Y+HRLGRTGR GKEG+G
Sbjct: 403 TAEAFKQAEQGLLFSSDVSARGMDFPNVTHVIQVGLPSSGEDYVHRLGRTGRAGKEGQGY 462
Query: 733 LLLAPWEEYFL-DDLKDLPLDKLQLPHLNPEIQLQMDNHM-----------AKIDNNVKE 780
LLL E++F+ +LK LP+ +P +Q +DN M K+D K
Sbjct: 463 LLLDKDEQFFVRKELKGLPISA------DPALQQDIDNRMDESRQAVGTALTKVDPVAKG 516
Query: 781 AAYHAWLGYYNSI-REIGRDKTTLVELANKFA-QSIGLQR-PPPLFRKTALK-MGLK 833
AY AWLGYY +++G K LV AN++A + +G PP+ AL M LK
Sbjct: 517 QAYQAWLGYYTGYSKDMGWSKEALVRRANEYAIKGLGWTADEPPMITPKALGFMNLK 573
>gi|224004700|ref|XP_002296001.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|209586033|gb|ACI64718.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 448
Score = 283 bits (723), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 183/460 (39%), Positives = 261/460 (56%), Gaps = 57/460 (12%)
Query: 425 TGTGKSIAFLLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDG 484
TGTGK++AFL+PA+E++LK+ T + VLI+ PTRELA+QI +A LL H
Sbjct: 1 TGTGKTLAFLVPALESLLKSGVDGNT-----VGVLIVSPTRELATQIGDQAKKLLTFHKN 55
Query: 485 IGVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKM------L 538
+ + GGT K D L ILVATPGRLLDH+EN + R G M L
Sbjct: 56 LSCQVMFGGTDMKKDINALNKSIPTILVATPGRLLDHLENTVLKNGRSFGRDMMSSTPIL 115
Query: 539 VLDEADHLLDLGFRKDVENIVDCLPRR--RQSLLFSATMPKELV------LKREHTYIDT 590
VLDE D LLD+GFR+++ IV LP+R RQ+ LFSAT+PKEL ++R++ +D
Sbjct: 116 VLDETDRLLDMGFRREISKIVSYLPKREHRQTFLFSATVPKELKQIMSENMRRDYVEVDC 175
Query: 591 VGLG------SVETPVKIKQSCLVAPHELHF-----QILHHLLKEHILGTPDYKVIVFCS 639
+ G V T + Q+ +V P + QI+ ++E +K++VF
Sbjct: 176 IAGGEGDHPDGVHTNALVDQTHIVLPSFDRYVSSVVQIVQMSMRED---PTSHKLVVFFP 232
Query: 640 TGMVTSLLYLLLRE-MKMNVREMYSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYP 698
T + + + V E++SRK Q +R++ S+ FR +KR +L TSDVSARG+DYP
Sbjct: 233 TARLVGFFADFFNTGLGIEVIELHSRKSQGHRNKASDTFRNAKRGVLFTSDVSARGVDYP 292
Query: 699 DVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLAPWEEYFL-DDLKDL-------- 749
+V+ V+Q GIP REQYIHRLGRTGR GK G+G+L+LAP+E F+ +LK+L
Sbjct: 293 NVSGVIQFGIPESREQYIHRLGRTGRAGKAGQGLLVLAPFESKFIKSELKELKIPENSKV 352
Query: 750 ------PLDKLQLPHLNPEIQL--QMDNHMAKIDNNVKEAAYHAWLGYY-NSIREIG-RD 799
P+D+ + + P Q D+ ++K E AY A+LGYY ++ I R
Sbjct: 353 SELMARPVDEGVMNAIQPVFQRIKTGDSVLSK----SAEQAYQAFLGYYRGQMKRINIRS 408
Query: 800 KTTLVELANKFAQSIGLQRPPPLFRKTALKMGLKDIPGIR 839
LV +AN+++ +GL P L +T KMGLK + G+R
Sbjct: 409 NEELVVVANEYSALMGLTEVPGLLSRTVSKMGLKGVVGLR 448
>gi|378727369|gb|EHY53828.1| DEAD box RNA helicase HelA [Exophiala dermatitidis NIH/UT8656]
Length = 556
Score = 280 bits (717), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 182/469 (38%), Positives = 268/469 (57%), Gaps = 30/469 (6%)
Query: 386 ISPLTIKALTA-AGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKA 444
++P I LT G+ M VQ ATL L+GKD + +AKTGTGK++AFLLPA++ +LK
Sbjct: 69 LNPTIIDTLTNDFGFDHMMPVQAATLEHLLQGKDCLAQAKTGTGKTLAFLLPAVDTILKN 128
Query: 445 TSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLE 504
+ + LILCPTRELA QIAAEA L++ + + +GGT + + +
Sbjct: 129 RTQR-------LSALILCPTRELALQIAAEAKKLVQRFPQLKIACSIGGTNKTAEAQAIY 181
Query: 505 SDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPR 564
C ILVATPGRLLDH+ + + +L L+ LVLDEAD +LD+GF D++ I+ LP
Sbjct: 182 RG-CDILVATPGRLLDHLGEEQ-VQHQLGSLQTLVLDEADRMLDMGFLPDIKKILTYLPD 239
Query: 565 -RRQSLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHEL-HFQ 616
RQS+LFSAT+ + L L ++H +I T+ T ++ Q + P + H
Sbjct: 240 LPRQSMLFSATIDDQVRKVAHLFLNKDHEFISTIDPSEANTHERVDQYLVTTPSTIEHAP 299
Query: 617 ILHHLLKEHILGTPD--YKVIVFCSTGMVTSLLYLLLREMKM--NVREMYSRKPQLYRDR 672
+ ++++ + + +K IVF T +L M V ++SR Q R R
Sbjct: 300 AMVSVIEDELSSAANNQFKAIVFAPTAAHADFYGSILSSMGTLPKVSVLHSRMSQSKRTR 359
Query: 673 ISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGV 732
I+++FR + I V +DV ARGMD+P V+ V Q+G+P D+E YIHRLGRT R EG G+
Sbjct: 360 ITDDFRQATNAICVATDVIARGMDFPGVSHVFQIGLPLDKESYIHRLGRTARADAEGRGI 419
Query: 733 LLLAPWEEYFLDDLKDLPLDKLQLPHLNPEIQLQMDNHMAKIDNNVKEAAYHAWLGYYNS 792
+L+ E+ FL LK + L P + I+ ++ +A+++N K+ Y AWLGYY +
Sbjct: 420 FVLSEAEKPFLHQLKKINLQPYPKP-VRYSIE-DVEPALAELEN--KDKIYQAWLGYYKA 475
Query: 793 -IREIGRDKTTLVELANKFAQSIGLQRP--PPLFRKTALKMGLKDIPGI 838
++ +G LV AN+FA GL+ P P L +KT KMGLK +PG+
Sbjct: 476 HLKVLGWSPADLVREANRFALD-GLECPEVPALEKKTIGKMGLKGVPGL 523
>gi|219111399|ref|XP_002177451.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217411986|gb|EEC51914.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 587
Score = 280 bits (715), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 200/500 (40%), Positives = 284/500 (56%), Gaps = 59/500 (11%)
Query: 366 KKEKREEEP-ILSQKRFDE-CGISPLTIKALT-AAGYIQMTRVQEATLSACLEGKDAVVK 422
+ E+ ++P +L+ RFDE + P T +A+T G+ QMT +Q T +A LEGK + +
Sbjct: 105 RHEQATQDPTLLTTYRFDERADLHPGTKRAVTEVMGFQQMTEIQYKTFNAALEGKSVLGR 164
Query: 423 AKTGTGKSIAFLLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNH 482
A+TGTGK++AFLLPAIE L S + + +LI+ PTRELA QI +EA LL
Sbjct: 165 ARTGTGKTLAFLLPAIER-LMFMDVSVYRADRNVGILIVAPTRELAMQIGSEASRLLTFE 223
Query: 483 DGIGVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLK------ 536
VLTL GGT+ + D L ILVATPGRLLDH+E+ RL G K
Sbjct: 224 SKWSVLTLYGGTKIQRDVALLNRQIPTILVATPGRLLDHLED-----TRLRGRKFSDVVG 278
Query: 537 ---MLVLDEADHLLDLGFRKDVENIVDCLPR--RRQSLLFSATMPKEL------VLKREH 585
++VLDE D LL+ GF KD I+ LPR +RQ+LLFSAT+P L +L ++
Sbjct: 279 ETPIVVLDETDRLLE-GFAKDTRRILSFLPRPEKRQTLLFSATVPTRLKRILDEILPADY 337
Query: 586 TYIDTVGL--GSVETPVKIKQSCLVAP-HELHFQILHHLLKEHILGTPDYKVIVFCSTGM 642
+D VG S +T ++ QS + P + + L + K+ + DYK++VF
Sbjct: 338 VEVDCVGNNDSSKQTNKRVTQSYTLLPAMDSYVSYLVSITKQAMEEEKDYKIVVFFPAAR 397
Query: 643 VTSLLYLLLRE-MKMNVREMYSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVT 701
+ + + V EM+SR Q R RI+ FR +KR +L TSDVSARG+D+PDVT
Sbjct: 398 LVRFFTRFFNVGLGIPVLEMHSRMSQSARTRINSSFRNAKRGVLFTSDVSARGVDFPDVT 457
Query: 702 SVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLAPWEEYFLDDLKDLPLDKLQLPHLNP 761
VVQ G P ++E YIHRLGRTGR G+EG+G+L+L P+E+ LK++ L +L
Sbjct: 458 LVVQYGAPSNKELYIHRLGRTGRAGREGKGLLVLLPFEK---KALKEIDLQRL------- 507
Query: 762 EIQLQMDNH---MAKID---NNVK----------EAAYHAWLGYYNSIREIGRDKTTLVE 805
I + +++H M K+D N V+ EAAY A++ YY + + +G + +V+
Sbjct: 508 -ICVNIEDHKDLMDKVDFAQNLVRSGHPLLTPNAEAAYLAFVAYYMTSKGMG-SRDDVVD 565
Query: 806 LANKFAQSIGLQRPPPLFRK 825
A FAQ IGL + P L+ K
Sbjct: 566 AAKVFAQIIGLPKLPDLWGK 585
>gi|402075491|gb|EJT70962.1| hypothetical protein GGTG_11985 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 613
Score = 280 bits (715), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 176/468 (37%), Positives = 259/468 (55%), Gaps = 39/468 (8%)
Query: 399 YIQMTRVQEATLSACLEGK-DAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLVPPIY 457
+ +MT VQ AT+ + + D + +AKTGTGK+IAFLLPAI+A+L+ S I
Sbjct: 141 FDRMTPVQAATIRHLVTDRGDVLAQAKTGTGKTIAFLLPAIQALLRRDRSRGNA----IS 196
Query: 458 VLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILVATPGR 517
+L++ PTRELA QIA EA LL+ I V T +GGT +++R+ CQIL+ TPGR
Sbjct: 197 LLVISPTRELALQIAKEAEMLLQRMPSIKVATAIGGTNKNAEEKRILRG-CQILIGTPGR 255
Query: 518 LLDHIEN---KSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRR----RQSLL 570
+ DH+ S + L GL LVLDEAD LLD+GF ++ IV CLP R RQ +L
Sbjct: 256 IFDHLTTDGKNSEIRAMLQGLDTLVLDEADRLLDMGFLPSLKQIVSCLPPRDKVPRQGML 315
Query: 571 FSATMP------KELVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQI-LHHLLK 623
FSATM + L + +I T+ G T ++ Q +V P + L ++
Sbjct: 316 FSATMADHVAKVANIALAPGYKFISTIAAGEKNTHDRVPQHLVVVPTFSDMAVGLAGAIR 375
Query: 624 EHILGTPD---YKVIVFCSTGMVTSLLYLLLREMKM--NVREMYSRKPQLYRDRISEEFR 678
+ PD +K IVF T + +L ++ V ++SR Q R ++++FR
Sbjct: 376 HELDQAPDKGAFKAIVFAPTAGLVDFYATVLGKLPSLPAVSTLHSRMSQPKRTSVTDDFR 435
Query: 679 ASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLAPW 738
+ I++ +DV ARGMD+P V++V Q GIP D+E YIHRLGRT R G EG G L++ +
Sbjct: 436 KAASGIMIATDVIARGMDFPAVSNVFQAGIPADKESYIHRLGRTARAGAEGRGTLIVTSY 495
Query: 739 EEYFLDD-LKDLPLDKLQLPHLNPEIQLQMDNHMAKIDNNVKEA----AYHAWLGYYNS- 792
EEYF +KD+ +N E + + ++ + +++A Y AWLG+Y
Sbjct: 496 EEYFPRRVMKDITF-------VNQEADMSSRADVTQVTDQLEDAQKTKTYQAWLGFYRPF 548
Query: 793 IREIGRDKTTLVELANKFAQ-SIGLQRPPPLFRKTALKMGLKDIPGIR 839
++ +G + LV+ AN FA+ +G P L + T KMGLK +PG+R
Sbjct: 549 VKALGWNDIRLVQEANIFARDGLGAPETPGLAKSTIGKMGLKGVPGLR 596
>gi|85104281|ref|XP_961716.1| hypothetical protein NCU01104 [Neurospora crassa OR74A]
gi|28923264|gb|EAA32480.1| predicted protein [Neurospora crassa OR74A]
Length = 678
Score = 280 bits (715), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 177/470 (37%), Positives = 261/470 (55%), Gaps = 27/470 (5%)
Query: 391 IKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTT 450
+KAL A GY MT VQE L+ +D +V+AKTGTGK+IAFLLPA+ +L A +
Sbjct: 94 LKALDAMGYANMTPVQEKVLNMGSFTQDCLVQAKTGTGKTIAFLLPALHTLLNAKDLDPS 153
Query: 451 QLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTL-VGGTRFKVDQRRLESDPCQ 509
Q + +LIL PTRELA QI E L+ + L VGG+ +
Sbjct: 154 Q----VALLILAPTRELAQQIVDECEKLVSQCNPRFECHLAVGGSAKASSLSKFLRGKPT 209
Query: 510 ILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQS- 568
ILVATPGRL D++ ++ + + L+ LVLDEAD +LD GF + I+ LP+++Q+
Sbjct: 210 ILVATPGRLDDYLSDER-VRQKFNNLRCLVLDEADCMLDQGFLPALTKILTSLPKKQQAG 268
Query: 569 ---LLFSATMPKEL------VLKREHTYIDTVGLGSVETPVKIKQSCL-VAPHELHFQIL 618
+ FSAT+P + VL +H +I TV T + QS + V + L
Sbjct: 269 WQGMCFSATLPPSIHKVLHHVLAPKHAHISTVDENEAPTINSVPQSYMKVDSVDDVLPTL 328
Query: 619 HHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLL------REMKMNVREMYSRKPQLYRDR 672
H+LL P K +VFCST +LLY L K+ V +M SR Q R R
Sbjct: 329 HNLLSAERYDNPKLKAVVFCSTARQAALLYTLFGHTGGASPAKLPVWQMQSRMNQAQRTR 388
Query: 673 ISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGV 732
+EEF+ + IL SDV RG+D+PD+ V+QVGIP + EQY+HR+GRTGR GK G V
Sbjct: 389 TTEEFKNTDSGILFASDVVGRGLDFPDIHLVIQVGIPLNSEQYVHRVGRTGRAGKGGRAV 448
Query: 733 LLLAPWEEYFLDDLKDLPLDKLQLPHLNP---EIQLQMDNHMAKIDNNVKEAAYHAWLGY 789
+++ P + +F++ + P+ + +L H + + +AK+ + VK AY A+LG+
Sbjct: 449 MIITPEDFWFVERNRQFPMAQSKLDHPKAAAVDSASIISQSLAKVPDQVKAQAYVAYLGF 508
Query: 790 YNSIR-EIGRDKTTLVELANKFAQSIGLQRPPPLFRKTALKMGLKDIPGI 838
N++R ++ +V++AN++A S+G + PP + T KMGLK +PG+
Sbjct: 509 VNTMRSKMKITPAQMVQVANRYAFSLGCEEPPAIEASTIGKMGLKGVPGL 558
>gi|350293941|gb|EGZ75026.1| DEAD-domain-containing protein [Neurospora tetrasperma FGSC 2509]
Length = 736
Score = 279 bits (714), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 178/476 (37%), Positives = 262/476 (55%), Gaps = 39/476 (8%)
Query: 391 IKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTT 450
+KAL A GY MT VQE L+ +D +V+AKTGTGK+IAFLLPA+ +L A +
Sbjct: 152 LKALDAMGYANMTPVQEKVLNMGSFTQDCLVQAKTGTGKTIAFLLPALHTLLNAKDLDPS 211
Query: 451 QLVPPIYVLILCPTRELASQIAAEAIALLKN-------HDGIGVLTLVGGTRFKVDQRRL 503
Q + +LIL PTRELA QI E L+ H +G G + + L
Sbjct: 212 Q----VALLILAPTRELAQQIVDECEKLVSQCNPRFECHLAVG-----GSAKASSLSKFL 262
Query: 504 ESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLP 563
P ILVATPGRL D++ ++ + + L+ LVLDEAD +LD GF + I+ LP
Sbjct: 263 RGKPT-ILVATPGRLDDYLSDER-VKQKFNNLRCLVLDEADCMLDQGFLPALTKILTSLP 320
Query: 564 RRRQS----LLFSATMPKEL------VLKREHTYIDTVGLGSVETPVKIKQSCL-VAPHE 612
+++Q+ + FSAT+P + VL +H +I TV T + QS + V +
Sbjct: 321 KKQQAGWQGMCFSATLPPSIHKVLHHVLAPKHAHISTVDENEAPTINSVPQSYMKVDSVD 380
Query: 613 LHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLL------REMKMNVREMYSRKP 666
LH+LL P K +VFCST +LLY L K+ V +M SR
Sbjct: 381 DVLPTLHNLLSAERYDNPKLKAVVFCSTARQAALLYTLFGHTGGASPAKLPVWQMQSRMN 440
Query: 667 QLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREG 726
Q R R +EEF+ + IL SDV RG+D+PD+ V+QVGIP + EQY+HR+GRTGR G
Sbjct: 441 QAQRTRTTEEFKNTDSGILFASDVVGRGLDFPDIHLVIQVGIPLNSEQYVHRVGRTGRAG 500
Query: 727 KEGEGVLLLAPWEEYFLDDLKDLPLDKLQLPHLNP---EIQLQMDNHMAKIDNNVKEAAY 783
K G V+++ P + +F++ + P+ + +L H + + +AK+ + VK AY
Sbjct: 501 KGGRAVMIITPEDFWFVERNRQFPMAQSKLDHPKAAAVDSASIISQSLAKVPDQVKAQAY 560
Query: 784 HAWLGYYNSIR-EIGRDKTTLVELANKFAQSIGLQRPPPLFRKTALKMGLKDIPGI 838
A+LG+ N++R ++ +V++AN++A S+G + PP + T KMGLK +PG+
Sbjct: 561 VAYLGFVNTMRSKMKITPAQMVQVANRYAFSLGCEEPPAIEASTIGKMGLKGVPGL 616
>gi|18376223|emb|CAD21338.1| related to RNA helicase MSS116 [Neurospora crassa]
Length = 695
Score = 279 bits (713), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 178/476 (37%), Positives = 262/476 (55%), Gaps = 39/476 (8%)
Query: 391 IKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTT 450
+KAL A GY MT VQE L+ +D +V+AKTGTGK+IAFLLPA+ +L A +
Sbjct: 111 LKALDAMGYANMTPVQEKVLNMGSFTQDCLVQAKTGTGKTIAFLLPALHTLLNAKDLDPS 170
Query: 451 QLVPPIYVLILCPTRELASQIAAEAIALLKN-------HDGIGVLTLVGGTRFKVDQRRL 503
Q + +LIL PTRELA QI E L+ H +G G + + L
Sbjct: 171 Q----VALLILAPTRELAQQIVDECEKLVSQCNPRFECHLAVG-----GSAKASSLSKFL 221
Query: 504 ESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLP 563
P ILVATPGRL D++ ++ + + L+ LVLDEAD +LD GF + I+ LP
Sbjct: 222 RGKPT-ILVATPGRLDDYLSDER-VRQKFNNLRCLVLDEADCMLDQGFLPALTKILTSLP 279
Query: 564 RRRQS----LLFSATMPKEL------VLKREHTYIDTVGLGSVETPVKIKQSCL-VAPHE 612
+++Q+ + FSAT+P + VL +H +I TV T + QS + V +
Sbjct: 280 KKQQAGWQGMCFSATLPPSIHKVLHHVLAPKHAHISTVDENEAPTINSVPQSYMKVDSVD 339
Query: 613 LHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLL------REMKMNVREMYSRKP 666
LH+LL P K +VFCST +LLY L K+ V +M SR
Sbjct: 340 DVLPTLHNLLSAERYDNPKLKAVVFCSTARQAALLYTLFGHTGGASPAKLPVWQMQSRMN 399
Query: 667 QLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREG 726
Q R R +EEF+ + IL SDV RG+D+PD+ V+QVGIP + EQY+HR+GRTGR G
Sbjct: 400 QAQRTRTTEEFKNTDSGILFASDVVGRGLDFPDIHLVIQVGIPLNSEQYVHRVGRTGRAG 459
Query: 727 KEGEGVLLLAPWEEYFLDDLKDLPLDKLQLPHLNP---EIQLQMDNHMAKIDNNVKEAAY 783
K G V+++ P + +F++ + P+ + +L H + + +AK+ + VK AY
Sbjct: 460 KGGRAVMIITPEDFWFVERNRQFPMAQSKLDHPKAAAVDSASIISQSLAKVPDQVKAQAY 519
Query: 784 HAWLGYYNSIR-EIGRDKTTLVELANKFAQSIGLQRPPPLFRKTALKMGLKDIPGI 838
A+LG+ N++R ++ +V++AN++A S+G + PP + T KMGLK +PG+
Sbjct: 520 VAYLGFVNTMRSKMKITPAQMVQVANRYAFSLGCEEPPAIEASTIGKMGLKGVPGL 575
>gi|397566368|gb|EJK45023.1| hypothetical protein THAOC_36393 [Thalassiosira oceanica]
Length = 631
Score = 278 bits (710), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 186/517 (35%), Positives = 275/517 (53%), Gaps = 76/517 (14%)
Query: 363 NGEKKEKREEEPILSQKRFD-ECGISPLTIKALT-AAGYIQMTRVQEATLSACLEGKDAV 420
N K + ++ +LSQ FD I PLT +ALT G MT +Q T +A G D +
Sbjct: 121 NPPPKRRGGDQSLLSQVSFDSHSDIDPLTKRALTDVLGISSMTEIQSKTFAAAFAGDDVL 180
Query: 421 VKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLK 480
+A+TGTGK+IAFLLPAIE ++ S+ +
Sbjct: 181 GRARTGTGKTIAFLLPAIERAIREGESNGS------------------------------ 210
Query: 481 NHDGIGVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGL----K 536
I +L + GGT+ D RL+ +LVATPGRL D ++ + VR +
Sbjct: 211 ----ISILVVYGGTKVSRDVTRLKKRLPTVLVATPGRLQDLLQTATVGKVRFSTIMARTS 266
Query: 537 MLVLDEADHLLDLGFRKDVENIVDCLPRR--RQSLLFSATMPKEL------VLKREHTYI 588
+LVLDE D LLD+GFR+++ I+D LP RQ+LLFSAT+P EL ++ ++ +
Sbjct: 267 VLVLDETDQLLDMGFRREILKIMDHLPSSNDRQTLLFSATIPDELKQVMKKAMRDDYVEV 326
Query: 589 DTV-----GLGSVETPVKIKQSCLVAPHELHF-----QILHHLLKEHILGTPDYKVIVFC 638
D + G S +T + +KQS V P + +++ +++ D KV+VF
Sbjct: 327 DCIQDGDDGGSSTQTHIHVKQSHAVIPDVSQYVSSVVRVVKAAVQDE---KADNKVVVFF 383
Query: 639 STGMVTSLLYLLLRE-MKMNVREMYSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDY 697
T S + E + + V E++S+K Q YR R+S+EFR + +L TSDVSARG+DY
Sbjct: 384 PTARTVSYFADIFNEVINLPVLELHSKKSQGYRKRVSDEFRNADGGVLFTSDVSARGVDY 443
Query: 698 PDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLAPWEEYFLDDLK--DLPLDKLQ 755
P VT VVQ G+P REQY+HRLGRTGR G EG+G L+L P+E+ F+D+L+ D+ D+
Sbjct: 444 PGVTHVVQFGMPSSREQYVHRLGRTGRAGAEGKGWLILGPFEQLFVDELRGIDITKDESL 503
Query: 756 LPHLNPEIQLQMDNHMAKIDNNVK----------EAAYHAWLGYY--NSIREIGRDKTTL 803
+N + + D+ M ++ V+ EA+Y A+LGYY R R K L
Sbjct: 504 TAIMNKSVLDETDDQMQEMLERVQNGDKKLVKAGEASYSAFLGYYLAQMKRMRMRRKEDL 563
Query: 804 VELANKFAQSIGLQRPPPLFRKTALKMGLKDIPGIRL 840
V +AN+ + ++G + P L + KMGLK + GI +
Sbjct: 564 VSIANELSGAMGFRSAPSLPKNLVGKMGLKGVQGINV 600
>gi|408389732|gb|EKJ69163.1| hypothetical protein FPSE_10659 [Fusarium pseudograminearum CS3096]
Length = 574
Score = 276 bits (707), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 183/491 (37%), Positives = 277/491 (56%), Gaps = 38/491 (7%)
Query: 376 LSQKRFDEC----GISPLTIKALTAAGYIQ-MTRVQEATLSACL--EGKDAVVKAKTGTG 428
S +RFD + P+ ++ +T + MT VQ +TL L + D +V+A+TGTG
Sbjct: 70 FSTRRFDSLLENNQVDPIVVRTITNDMKFEFMTPVQASTLDELLPPQRNDCLVQARTGTG 129
Query: 429 KSIAFLLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVL 488
K++AFLLPA++ ++ S + I +L++ PTRELA QIAAEA +LKN V
Sbjct: 130 KTMAFLLPALQTMINQKRGSGSG----ISLLVISPTRELAQQIAAEATRVLKNLPQYRVQ 185
Query: 489 TLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLD 548
++GGT ++R + C+IL+ATPGRLLDH+ ++ + + + LVLDEAD LLD
Sbjct: 186 CVMGGTNKDREERAILGG-CEILIATPGRLLDHMSSED-IRYSMRHVDTLVLDEADRLLD 243
Query: 549 LGFRKDVENIVDCLPRR----RQSLLFSATMP------KELVLKREHTYIDTVGLGSVET 598
+GF KD+ +IV LP + RQ +LFSAT+ ELV ++ +I T+ G V T
Sbjct: 244 MGFLKDLRSIVKQLPDKAKTNRQGMLFSATIAPHVKQVAELVCSPQYKFISTIPEGEVNT 303
Query: 599 PVKIKQSCLVAP--HELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKM 656
++ Q + P +L ++ + +E G D+K I+F +T + +L
Sbjct: 304 HERVPQFLVQVPTFSDLAPAMVGVVREEATRGQ-DFKAILFATTAAIADFYNSILVATPG 362
Query: 657 --NVREMYSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQ 714
V ++SR Q R RI+ E+R ++ ILV +DV ARGMD+P VT+V+QVG+P D+E
Sbjct: 363 LPPVSVLHSRMTQSKRTRITNEYRTARNAILVATDVVARGMDFPGVTAVIQVGLPSDKES 422
Query: 715 YIHRLGRTGREGKEGEGVLLLAPWEEYFLDDLKDLPLDKLQLPHLNPEIQLQMD--NHMA 772
YIHRLGRT R +G G+L++ E +F L ++ ++ D + +
Sbjct: 423 YIHRLGRTARADADGRGILIVCETEGFF----PKYTLKEINFQPREADLSPTQDVIDLAS 478
Query: 773 KIDNNVKEAAYHAWLGYYNS-IREIGRDKTTLVELANKFAQSIGLQRP--PPLFRKTALK 829
K++++ K Y AWLGYYNS ++ + DKT LV NKFA + GL P P L + T K
Sbjct: 479 KMEDDAKAKVYQAWLGYYNSHMKSLKWDKTELVRQGNKFAYT-GLGSPETPALQKSTVGK 537
Query: 830 MGLKDIPGIRL 840
MGLK + G+ +
Sbjct: 538 MGLKGVKGLNI 548
>gi|336472810|gb|EGO60970.1| hypothetical protein NEUTE1DRAFT_35647 [Neurospora tetrasperma FGSC
2508]
Length = 677
Score = 275 bits (704), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 176/473 (37%), Positives = 256/473 (54%), Gaps = 51/473 (10%)
Query: 391 IKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTT 450
+KAL A GY MT VQE L+ +D +V+AKTGTGK+IAFLLPA+ +L A +
Sbjct: 111 LKALDAMGYANMTPVQEKVLNMGSFTQDCLVQAKTGTGKTIAFLLPALHTLLNAKDLDPS 170
Query: 451 QLVPPIYVLILCPTRELASQIAAEAIALLKN-------HDGIGVLTLVGGTRFKVDQRRL 503
Q + +LIL PTRELA QI E L+ H +G G + + L
Sbjct: 171 Q----VALLILAPTRELAQQIVDECEKLVSQCNPRFECHLAVG-----GSAKASSLSKFL 221
Query: 504 ESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLP 563
P ILVATPGRL D++ ++ + + L+ LVLDEAD +LD GF + I+ LP
Sbjct: 222 RGKPT-ILVATPGRLDDYLSDER-VKQKFNNLRCLVLDEADCMLDQGFLPALTKILTSLP 279
Query: 564 RRRQS----LLFSATMPKEL------VLKREHTYIDTVGLGSVETPVKIKQSCL-VAPHE 612
+++Q+ + FSAT+P + VL +H +I TV T + QS + V +
Sbjct: 280 KKQQAGWQGMCFSATLPPSIHKVLHHVLAPKHAHISTVDENEAPTINSVPQSYMKVDSVD 339
Query: 613 LHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLL------REMKMNVREMYSRKP 666
LH+LL P K +VFCST +LLY L K+ V +M SR
Sbjct: 340 DVLPTLHNLLSAERYDNPKLKAVVFCSTARQAALLYTLFGHTGGASPAKLPVWQMQSRMN 399
Query: 667 QLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREG 726
Q R R +EEF+ + IL SDV RG+D+PD+ V+QVGIP + EQY+HR+GRTGR G
Sbjct: 400 QAQRTRTTEEFKNTDSGILFASDVVGRGLDFPDIHLVIQVGIPLNSEQYVHRVGRTGRAG 459
Query: 727 KEGEGVLLLAPWEEYFLDDLKDLPLDKLQLPHLNPEIQLQMDNHMAKIDNNVKEAAYHAW 786
K G V+++ P + +F++ + P+ +AK+ + VK AY A+
Sbjct: 460 KGGRAVMIITPEDFWFVERNRQFPM---------------AHQSLAKVPDQVKAQAYVAY 504
Query: 787 LGYYNSIR-EIGRDKTTLVELANKFAQSIGLQRPPPLFRKTALKMGLKDIPGI 838
LG+ N++R ++ +V++AN++A S+G + PP + T KMGLK +PG+
Sbjct: 505 LGFVNTMRSKMKITPAQMVQVANRYAFSLGCEEPPAIEASTIGKMGLKGVPGL 557
>gi|156048134|ref|XP_001590034.1| hypothetical protein SS1G_08798 [Sclerotinia sclerotiorum 1980]
gi|154693195|gb|EDN92933.1| hypothetical protein SS1G_08798 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 670
Score = 275 bits (702), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 185/492 (37%), Positives = 266/492 (54%), Gaps = 45/492 (9%)
Query: 376 LSQKRFDECG----ISPLTIKALTA-AGYIQMTRVQEATLSACL-EGKDAVVKAKTGTGK 429
L RF + G ++P+ +K +T + M VQ ATL L E D + +AKTGTGK
Sbjct: 70 LDTPRFADLGAENLLNPILLKTITEDLKFDHMMPVQAATLRPLLSERVDCLAQAKTGTGK 129
Query: 430 SIAFLLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLT 489
+IAFL+PAI+ ++ I +L++ PTRELA QIA EA LLKN V
Sbjct: 130 TIAFLIPAIQTLINKQRRPQDG----ISLLVMTPTRELAQQIAKEASQLLKNLPNYKVGF 185
Query: 490 LVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDL 549
+GGT +++ + + C IL+ATPGRL DH+ ++ G++ L +VLDEAD LLD+
Sbjct: 186 AIGGTNKTTEEKNILNG-CNILIATPGRLFDHLSDE-GITNAFRNLDTIVLDEADRLLDM 243
Query: 550 GFRKDVENIVDCLP----RRRQSLLFSATMP------KELVLKREHTYIDTVGLGSVETP 599
GF + +I+ CLP +RQ +LFSAT+ LVL +++ +I T+ G V T
Sbjct: 244 GFMNAIRDIIKCLPDKQKTKRQGMLFSATIAPHVEKVAHLVLSKDYKFISTIPEGEVNTH 303
Query: 600 VKIKQSCLVAPH--ELHFQILHHLLKEHIL-GTPDYKVIVFCSTGMVTSLLYLLLREMK- 655
++ Q + P+ ++ ++ + E L G +K IVF T + +L + K
Sbjct: 304 ARVPQHLITVPNFSDVASAMVGSIRAEMKLEGKDSFKAIVFAPTAALVDFYAQILSQFKD 363
Query: 656 -MNVREMYSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQ 714
V ++SR Q R ++EE+R +K ILV +DV ARGMD+P VT+V QVG+P D+E
Sbjct: 364 LPPVTALHSRVSQGKRTVVTEEYRVAKNGILVATDVIARGMDFPSVTNVFQVGLPADKES 423
Query: 715 YIHRLGRTGREGKEGEGVLLLAPWEEYFLD-DLKDLPLDKLQ-----LPHLNPEIQLQMD 768
YIHRLGRT R GKEG GV +L E F LK++ K + P + +I +M+
Sbjct: 424 YIHRLGRTARAGKEGRGVFILTEVESPFSTWTLKEIEFVKTEADLSSAPQVL-KIASRME 482
Query: 769 NHMAKIDNNVKEAAYHAWLGYY-NSIREIGRDKTTLVELANKFAQ-SIGLQRPPPLFRKT 826
NH Y AWLGYY N ++ + D LV N FA+ +G P L+R
Sbjct: 483 NH---------SKTYQAWLGYYKNHLKLMQWDNVELVRQGNIFARDGLGAPETPSLYRGI 533
Query: 827 ALKMGLKDIPGI 838
KMGLK G+
Sbjct: 534 VGKMGLKGTEGL 545
>gi|414881419|tpg|DAA58550.1| TPA: putative DEAD-box ATP-dependent RNA helicase family protein
[Zea mays]
Length = 363
Score = 271 bits (692), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 133/251 (52%), Positives = 187/251 (74%), Gaps = 6/251 (2%)
Query: 463 PTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHI 522
P ELA+Q+AAEA LLK H +GV ++GGTR +QR ++++PCQILVATPGRL DH+
Sbjct: 15 PFWELANQLAAEARKLLKYHRSLGVQVVIGGTRLPQEQRSMQANPCQILVATPGRLKDHL 74
Query: 523 ENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQSLLFSATMPKE---- 578
EN G S R+ G+K+LVLDEAD LLD+GFR+D+E I+ +P+ RQ+LLFSAT+ +E
Sbjct: 75 ENTPGFSTRIRGVKVLVLDEADRLLDMGFRRDIEKIITFIPKDRQTLLFSATVSEEIHQI 134
Query: 579 --LVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILHHLLKEHILGTPDYKVIV 636
L +++++ +I+ V G ET ++ Q+ +VAP LH IL+ +LK+H+ +YKVIV
Sbjct: 135 SHLAMRKDYDFINAVQEGDEETHAQVNQTYMVAPLGLHLPILYDVLKKHVAEDAEYKVIV 194
Query: 637 FCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEFRASKRLILVTSDVSARGMD 696
FC+T MVT L+ +L ++K+N+RE++SRK Q R ++S+EFR SK LILV+SDVSARG+D
Sbjct: 195 FCTTAMVTRLVAEVLSQLKLNIREIHSRKTQSARTKVSDEFRKSKGLILVSSDVSARGVD 254
Query: 697 YPDVTSVVQVG 707
YPDVT V+QV
Sbjct: 255 YPDVTLVMQVS 265
>gi|336269663|ref|XP_003349592.1| hypothetical protein SMAC_03180 [Sordaria macrospora k-hell]
gi|380093333|emb|CCC08991.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 694
Score = 271 bits (692), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 176/476 (36%), Positives = 258/476 (54%), Gaps = 39/476 (8%)
Query: 391 IKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTT 450
+KAL GY MT VQE L+ +D +V+AKTGTGK+IAFLLPA+ +L A +
Sbjct: 112 LKALNTMGYANMTPVQEKVLNMGSFTQDCLVQAKTGTGKTIAFLLPALHTLLNAKDLDPS 171
Query: 451 QLVPPIYVLILCPTRELASQIAAEAIALLKN-------HDGIGVLTLVGGTRFKVDQRRL 503
Q + +LIL PTRELA QI E L+ H +G G + + L
Sbjct: 172 Q----VALLILAPTRELAQQIVDECEKLVSQCNPRFECHLAVG-----GSAKASSLSKFL 222
Query: 504 ESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLP 563
P ILVATPGRL D++ ++ + + L+ LVLDEAD +LD GF + I+ LP
Sbjct: 223 RGKPT-ILVATPGRLDDYLSDER-VRQKFNNLRCLVLDEADCMLDQGFLPALTKILTSLP 280
Query: 564 RRRQS----LLFSATMPKEL------VLKREHTYIDTVGLGSVETPVKIKQSCL-VAPHE 612
+++Q+ + FSAT+P + VL +H +I TV T + QS + V +
Sbjct: 281 KKQQAGWQGMCFSATLPPTIHKVLHHVLAPKHAHITTVDENEAPTINSVPQSYMKVDSVD 340
Query: 613 LHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREM------KMNVREMYSRKP 666
LH LL P K +VFCST +LLY L K+ V +M SR
Sbjct: 341 DVIPTLHKLLSAERFDNPKLKAVVFCSTARQAALLYTLFGHTGGAAPAKLPVWQMQSRMN 400
Query: 667 QLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREG 726
Q R R +EEF++++ IL SDV RG+D+PD+ V+QVGIP + EQY+HR+GRTGR G
Sbjct: 401 QAQRTRTTEEFKSTESGILFASDVVGRGLDFPDIHLVIQVGIPLNSEQYVHRVGRTGRAG 460
Query: 727 KEGEGVLLLAPWEEYFLDDLKDLPLDKLQLPHLNP---EIQLQMDNHMAKIDNNVKEAAY 783
K G V+++ P + + P+ + +L H + + +AK+ + VK AY
Sbjct: 461 KGGRAVMIVTPRTFGLSERNRQFPMVQSKLEHAKAAAIDSAGIISQSLAKVPDQVKAQAY 520
Query: 784 HAWLGYYNSIR-EIGRDKTTLVELANKFAQSIGLQRPPPLFRKTALKMGLKDIPGI 838
A+LG+ N++R ++ +V++AN++A S+G + PP + T KMGLK +PG+
Sbjct: 521 VAFLGFTNTMRSKMKITPAQMVQIANRYAFSLGCEEPPAIEASTISKMGLKGVPGL 576
>gi|46115318|ref|XP_383677.1| hypothetical protein FG03501.1 [Gibberella zeae PH-1]
Length = 1481
Score = 270 bits (690), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 183/489 (37%), Positives = 275/489 (56%), Gaps = 34/489 (6%)
Query: 376 LSQKRFDE----CGISPLTIKALTAAGYIQ-MTRVQEATLSACL--EGKDAVVKAKTGTG 428
S +RFD + P+ ++ +T + MT VQ +TL L + D +V+A+TGTG
Sbjct: 70 FSTRRFDSLLENSQVDPIVVRTITNDMKFEFMTPVQASTLDELLPPQRNDCLVQARTGTG 129
Query: 429 KSIAFLLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVL 488
K++AFLLPA++ ++ S + I +L++ PTRELA QIAAEA +LKN V
Sbjct: 130 KTMAFLLPALQTMINQKRGSGSG----ISLLVISPTRELAQQIAAEATRVLKNLPQYRVQ 185
Query: 489 TLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLD 548
++GGT ++R + C+IL+ATPGRLLDH+ ++ + + + LVLDEAD LLD
Sbjct: 186 CVMGGTNKDREERAILGG-CEILIATPGRLLDHMSSED-IRYSMRHVDTLVLDEADRLLD 243
Query: 549 LGFRKDVENIVDCLPRR----RQSLLFSATMP------KELVLKREHTYIDTVGLGSVET 598
+GF KD+ +IV LP + RQ +LFSAT+ ELV ++ +I T+ G V T
Sbjct: 244 MGFLKDLRSIVKQLPDKAKTNRQGMLFSATIAPHVKQVAELVCSPQYKFISTIPEGEVNT 303
Query: 599 PVKIKQSCLVAPHELHFQ-ILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK-- 655
++ Q + P + +++E D+K I+F +T + +L
Sbjct: 304 HERVPQFLVQVPTFSDLAPAMVGVVREEATRGQDFKAILFATTAAIADFYTSILVATPGL 363
Query: 656 MNVREMYSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQY 715
V ++SR Q R RI+ E+R ++ ILV +DV ARGMD+P VTSV+QVG+P D+E Y
Sbjct: 364 PPVSVLHSRMTQSKRTRITNEYRTARNAILVATDVVARGMDFPGVTSVIQVGLPSDKESY 423
Query: 716 IHRLGRTGREGKEGEGVLLLAPWEEYFLD-DLKDLPLDKLQLPHLNPEIQLQMDNHMAKI 774
IHRLGRT R +G G+L++ E +F LK++ + L+P + + +K+
Sbjct: 424 IHRLGRTARADADGRGILIVCEMEGFFPKYTLKEINFQPRE-ADLSPT--QDVIDLASKM 480
Query: 775 DNNVKEAAYHAWLGYYNS-IREIGRDKTTLVELANKFAQSIGLQRP--PPLFRKTALKMG 831
+++ K Y AWLGYYNS ++ + DKT LV N FA GL P P L + T KMG
Sbjct: 481 EDDAKSKVYQAWLGYYNSHMKALKWDKTELVRQGNTFAYK-GLGSPDTPALQKSTVGKMG 539
Query: 832 LKDIPGIRL 840
LK + G+ +
Sbjct: 540 LKGVKGLNI 548
>gi|440633412|gb|ELR03331.1| hypothetical protein GMDG_06078 [Geomyces destructans 20631-21]
Length = 634
Score = 270 bits (689), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 186/493 (37%), Positives = 269/493 (54%), Gaps = 37/493 (7%)
Query: 373 EPI-LSQKRFDECG----ISPLTIKALTA-AGYIQMTRVQEATLSACLEGK-DAVVKAKT 425
EP+ L RF + G + P+ ++ +T + M VQ ATL L+ + D + +AKT
Sbjct: 80 EPVPLDTPRFADLGKENLLDPILLQTITEDLKFDHMMPVQAATLHDLLQKRTDVLAQAKT 139
Query: 426 GTGKSIAFLLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGI 485
GTGK+IAFLLPAI+ +L I +L++ PTRELA QIA EA ALL+
Sbjct: 140 GTGKTIAFLLPAIQTMLNKGRQQGG-----ISLLVISPTRELAMQIAKEASALLQRLPQF 194
Query: 486 GVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADH 545
V +GGT +++++ C IL+ATPGRL DH+ N+ + L LVLDEAD
Sbjct: 195 KVQFAIGGTNKDREEKQILGK-CDILIATPGRLYDHLSNQR-IRDSFRNLDTLVLDEADR 252
Query: 546 LLDLGFRKDVENIVDCLP----RRRQSLLFSATMP------KELVLKREHTYIDTVGLGS 595
LLD+GF +++I+ CLP +RQ +LFSAT+ LVL E+ + T+ G
Sbjct: 253 LLDMGFMNALKDIIKCLPDKEMSQRQGMLFSATIAPHVQKFAHLVLNNEYKFTSTIPKGE 312
Query: 596 VETPVKIKQSCLVAP--HELHFQILHHLLKE-HILGTPDYKVIVFCSTGMVTSLLYLLLR 652
V T ++ Q + P + ++ L E I G ++KVI+F TG + +L
Sbjct: 313 VNTHERVPQLLVTVPTFSAVAPALISSLRSEMAIAGKENFKVIIFAPTGSLADWYAAILS 372
Query: 653 EMK--MNVREMYSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPP 710
+K V ++SR Q R ++E FR S ILV +DV ARGMD+P+V++V Q GIP
Sbjct: 373 SLKDLPEVSVLHSRLSQSKRTNVTEAFRKSSSSILVATDVVARGMDFPNVSNVFQAGIPA 432
Query: 711 DREQYIHRLGRTGREGKEGEGVLLLAPWEEYFLD-DLKDLPLDKLQLPHLNPEIQLQMDN 769
D+E YIHRLGRT R G+EG V ++ E +F LK++ + P L+P ++
Sbjct: 433 DKESYIHRLGRTARAGREGRAVFIVTEAESFFPKYTLKEITFET-SAPDLSP--AAEIAK 489
Query: 770 HMAKIDNNVKEAAYHAWLGYY-NSIREIGRDKTTLVELANKFA-QSIGLQRPPPLFRKTA 827
A DN K Y AWLGYY N +R++G D LV N+FA ++ P + + T
Sbjct: 490 PAAAFDN--KGKVYQAWLGYYKNYVRQLGWDLERLVAEGNQFAFDALVAGEVPGIPKSTV 547
Query: 828 LKMGLKDIPGIRL 840
KMGLK + G+ +
Sbjct: 548 GKMGLKGVRGVNI 560
>gi|358347377|ref|XP_003637734.1| ATP-dependent RNA helicase [Medicago truncatula]
gi|355503669|gb|AES84872.1| ATP-dependent RNA helicase [Medicago truncatula]
Length = 290
Score = 269 bits (688), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 124/208 (59%), Positives = 168/208 (80%)
Query: 632 YKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEFRASKRLILVTSDVS 691
Y+V+VFC+T MVT L+ LL E+ +NVRE++SRKPQ YR R+S+EFR SK LILVTSDVS
Sbjct: 81 YQVLVFCTTAMVTRLVADLLGELNLNVREIHSRKPQSYRTRVSDEFRKSKGLILVTSDVS 140
Query: 692 ARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLAPWEEYFLDDLKDLPL 751
ARG+DYPDVT VVQVG+P D++QYIHRLGRTGR+GKEG+G+LLLAPWEE+FL KDLP+
Sbjct: 141 ARGVDYPDVTLVVQVGLPADKQQYIHRLGRTGRKGKEGQGILLLAPWEEFFLATAKDLPI 200
Query: 752 DKLQLPHLNPEIQLQMDNHMAKIDNNVKEAAYHAWLGYYNSIREIGRDKTTLVELANKFA 811
K +P ++P+ + +++ ++ ++ KEAAY AWLGYYNS +++G+DK LVELAN+F+
Sbjct: 201 VKAPVPLVDPDTKKKVERALSNVEMKNKEAAYQAWLGYYNSNKKVGKDKYRLVELANEFS 260
Query: 812 QSIGLQRPPPLFRKTALKMGLKDIPGIR 839
+ +GL PP + + KMGLK++PG+R
Sbjct: 261 RCMGLDNPPAIPKLVLGKMGLKNVPGLR 288
>gi|389645769|ref|XP_003720516.1| hypothetical protein MGG_10312 [Magnaporthe oryzae 70-15]
gi|351637908|gb|EHA45773.1| hypothetical protein MGG_10312 [Magnaporthe oryzae 70-15]
Length = 580
Score = 269 bits (687), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 177/470 (37%), Positives = 255/470 (54%), Gaps = 43/470 (9%)
Query: 399 YIQMTRVQEATLSACLEGK-DAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLVPPIY 457
+ +M+ VQ AT+ + + D + +AKTGTGK+IAFLLPA++ +L+ SS +
Sbjct: 97 FDRMSPVQAATIRHLIADRGDVLAQAKTGTGKTIAFLLPALQTLLRRPSSRGND----VS 152
Query: 458 VLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILVATPGR 517
VL++ PTRELA QIA EA ALL+ V T +GGT +QRR+ CQIL+ TPGR
Sbjct: 153 VLVISPTRELALQIAKEAEALLQRLPQYKVCTAIGGTNKDAEQRRILRG-CQILIGTPGR 211
Query: 518 LLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRR----RQSLLFSA 573
L+DH+E +S ++ L + VLDEAD LLD+GF ++ IV LP R RQ +LFSA
Sbjct: 212 LMDHLEEQS-VAEMLQSVDTFVLDEADRLLDMGFMPQLKKIVAALPNRQKVPRQGMLFSA 270
Query: 574 TMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSCLVAPH-----ELHFQILHHLL 622
T+ + + L ++ +I T+ G T ++ Q + P+ L H L
Sbjct: 271 TVAEHVAKVSSIALAPDYKFISTIPKGESNTHERVPQHLIEVPNFSDTMAALVGALRHEL 330
Query: 623 KEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVR--EMYSRKPQLYRDRISEEFRAS 680
E ++K IVF T + +L + R ++SR Q R R++E++R S
Sbjct: 331 AESA-NQDEFKAIVFAPTAALVDFYAAVLEGLPNMPRILTLHSRMTQSKRTRVTEDYRKS 389
Query: 681 KRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLAPWEE 740
+LV +DV ARGMD+P VT+V QVG+P D+E YIHRLGRT R G EG G +++ E
Sbjct: 390 NATVLVATDVVARGMDFPSVTNVFQVGLPMDKESYIHRLGRTARAGAEGRGTFIVSAAES 449
Query: 741 YF----LDDLK--DLPLDKLQLPHLNPEIQLQMDNHMAKIDNNVKEAAYHAWLGYYNSI- 793
YF + D D P D L + E+ +++ + AY +WLG+Y
Sbjct: 450 YFPRKVMKDFTFIDQPADLSALGEIK-EVAPKLEPY---------GKAYQSWLGFYKVFT 499
Query: 794 REIGRDKTTLVELANKFA-QSIGLQRPPPLFRKTALKMGLKDIPGIRLRK 842
+ +G D LV ANK A + G PPL + T KMGLK + G+ + K
Sbjct: 500 KPLGWDNEQLVREANKLALEGFGAPEVPPLNKSTVGKMGLKGVKGLVVVK 549
>gi|86197040|gb|EAQ71678.1| hypothetical protein MGCH7_ch7g1085 [Magnaporthe oryzae 70-15]
Length = 568
Score = 268 bits (686), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 177/470 (37%), Positives = 255/470 (54%), Gaps = 43/470 (9%)
Query: 399 YIQMTRVQEATLSACLEGK-DAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLVPPIY 457
+ +M+ VQ AT+ + + D + +AKTGTGK+IAFLLPA++ +L+ SS +
Sbjct: 97 FDRMSPVQAATIRHLIADRGDVLAQAKTGTGKTIAFLLPALQTLLRRPSSRGND----VS 152
Query: 458 VLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILVATPGR 517
VL++ PTRELA QIA EA ALL+ V T +GGT +QRR+ CQIL+ TPGR
Sbjct: 153 VLVISPTRELALQIAKEAEALLQRLPQYKVCTAIGGTNKDAEQRRILRG-CQILIGTPGR 211
Query: 518 LLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRR----RQSLLFSA 573
L+DH+E +S ++ L + VLDEAD LLD+GF ++ IV LP R RQ +LFSA
Sbjct: 212 LMDHLEEQS-VAEMLQSVDTFVLDEADRLLDMGFMPQLKKIVAALPNRQKVPRQGMLFSA 270
Query: 574 TMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSCLVAPH-----ELHFQILHHLL 622
T+ + + L ++ +I T+ G T ++ Q + P+ L H L
Sbjct: 271 TVAEHVAKVSSIALAPDYKFISTIPKGESNTHERVPQHLIEVPNFSDTMAALVGALRHEL 330
Query: 623 KEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVR--EMYSRKPQLYRDRISEEFRAS 680
E ++K IVF T + +L + R ++SR Q R R++E++R S
Sbjct: 331 AESA-NQDEFKAIVFAPTAALVDFYAAVLEGLPNMPRILTLHSRMTQSKRTRVTEDYRKS 389
Query: 681 KRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLAPWEE 740
+LV +DV ARGMD+P VT+V QVG+P D+E YIHRLGRT R G EG G +++ E
Sbjct: 390 NATVLVATDVVARGMDFPSVTNVFQVGLPMDKESYIHRLGRTARAGAEGRGTFIVSAAES 449
Query: 741 YF----LDDLK--DLPLDKLQLPHLNPEIQLQMDNHMAKIDNNVKEAAYHAWLGYYNSI- 793
YF + D D P D L + E+ +++ + AY +WLG+Y
Sbjct: 450 YFPRKVMKDFTFIDQPADLSALGEIK-EVAPKLEPY---------GKAYQSWLGFYKVFT 499
Query: 794 REIGRDKTTLVELANKFA-QSIGLQRPPPLFRKTALKMGLKDIPGIRLRK 842
+ +G D LV ANK A + G PPL + T KMGLK + G+ + K
Sbjct: 500 KPLGWDNEQLVREANKLALEGFGAPEVPPLNKSTVGKMGLKGVKGLVVVK 549
>gi|225560279|gb|EEH08561.1| ATP-dependent RNA helicase MSS116 [Ajellomyces capsulatus G186AR]
Length = 680
Score = 268 bits (685), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 197/530 (37%), Positives = 267/530 (50%), Gaps = 67/530 (12%)
Query: 369 KREEEPILSQKRFDECG----ISPLTIKALTAAGYIQ-MTRVQEATLSACLEGKDAVVKA 423
K EEP +F E +S I+ LT I MT VQ T++A L G D + +A
Sbjct: 66 KEAEEPPAELTQFSELASNGLVSDNIIRVLTNKMNITTMTDVQRMTINATLNGSDVLAQA 125
Query: 424 KTGTGKSIAFLLPAIEAVLKATS-------SSTTQLVPPIYVLILCPTRELASQIAAEAI 476
KTGTGK++AFLLP I+ +LK S + I +I+ PTRELA QIA EA
Sbjct: 126 KTGTGKTLAFLLPVIQNILKDQHLAQRPRFSRSQTDASDIRAIIISPTRELAEQIAVEAR 185
Query: 477 ALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLK 536
L+ N I V T VGGT+ + R++ D C ILV TPGRL+D + + V L
Sbjct: 186 KLVSN-TSIIVQTAVGGTKKREGLMRIQRDGCHILVGTPGRLIDIFSDPNS-GVAAPKLS 243
Query: 537 MLVLDEADHLLDLGFRKDVENIVDCLPRRR----QSLLFSATMPKELV------LKREHT 586
LVLDEAD LLD+GF D++ + LP RR Q+L+FSAT+P+E++ +KR+
Sbjct: 244 ALVLDEADRLLDIGFAPDIQELQTYLPHRRDVDRQTLMFSATVPREVMSMVRQTMKRDFA 303
Query: 587 YIDTVGLGSVETPVKIKQSC---------LVAPHELHFQILHHLLKEHILGTPDYKVIVF 637
++ TV + T + + Q L A EL Q + + P ++ F
Sbjct: 304 FVKTVQEDEIPTHLTVPQKAVFLRGMENQLPAIFELAKQGIEKHRSDPANNMPFKAIVYF 363
Query: 638 CSTGMVTSLLYLLLREMKMNVR------------EMYSRKPQLYRDRISEEFRASKRLIL 685
ST VT L M+ + EM+SR Q R R S FR+SK IL
Sbjct: 364 NSTAEVT-LAKQAFAAMRSSASSFSHPLPDTQSYEMHSRLTQDQRTRFSNMFRSSKSAIL 422
Query: 686 VTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLAPWEEYFL-D 744
+SDV+ARGMD+PDVT V+Q+GIP DRE YIHRLGRT R K+GEG L + L
Sbjct: 423 FSSDVTARGMDFPDVTHVIQIGIPRDRETYIHRLGRTARANKKGEGWLFTLDLDSGNLRR 482
Query: 745 DLKDLPLD---------------KLQLPHLNPEIQLQMDNHMAKIDNNVKEAAYHAWLGY 789
L+DLP+ + P +I Q+ + + K AAY A+LG
Sbjct: 483 ALRDLPIQVDDSSLLTAAADMTTDIGHPPWVSDIFSQVKSGFKTVSIKDKSAAYAAYLGV 542
Query: 790 YNSIREIGRDKTTLVELANKFA-QSIGLQRPPPLFRKTALKMGLKDIPGI 838
+ I RDK +V L N+ + GL+ PP TA K+G K +PG+
Sbjct: 543 MSHI----RDKFEVVRLINQLSTHGWGLREPPAFSATTAYKLGYKGVPGL 588
>gi|367037985|ref|XP_003649373.1| hypothetical protein THITE_2107881 [Thielavia terrestris NRRL 8126]
gi|346996634|gb|AEO63037.1| hypothetical protein THITE_2107881 [Thielavia terrestris NRRL 8126]
Length = 561
Score = 268 bits (685), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 178/486 (36%), Positives = 264/486 (54%), Gaps = 42/486 (8%)
Query: 386 ISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKAT 445
+ P ++AL+ G T VQE L +D +V+AKTGTGK+IAFLLPA++ +L A+
Sbjct: 18 LKPQLLQALSTMGLTHSTPVQEKVLQLPSFTQDCLVQAKTGTGKTIAFLLPALQNLLSAS 77
Query: 446 SSSTTQLVPPIYVLILCPTRELASQIAAEAIAL-------LKNHDGIGVLTLVGGTRFKV 498
+ + +L+L PTRELA QI E L L+ H +G G +R
Sbjct: 78 DLDRSF----VALLVLAPTRELAQQIVDECNKLTAACEPPLECHIAVG-----GSSRKSH 128
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
R L P ILVATPGRL+D++ ++ RL ++ +VLDEAD +LD GF + I
Sbjct: 129 LARFLNGKPA-ILVATPGRLIDYLSEEAARD-RLSKVRCVVLDEADRMLDAGFAPALYEI 186
Query: 559 VDCLPRRR----QSLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSCL- 607
++ LP + Q + FSAT+P E +VL ++H I T+ V T + QS
Sbjct: 187 LEQLPPKAEAQWQGMCFSATVPPEIEKMLPMVLAKDHARISTIDKNEVPTVETVPQSVYP 246
Query: 608 VAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREM------KMNVREM 661
V + LH +L P K IVFC T LLY + K+ V +M
Sbjct: 247 VGSVDDVLPTLHSVLSCARADNPALKAIVFCPTARHAGLLYHVFGHTGGAAPPKLPVFQM 306
Query: 662 YSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGR 721
+SR Q R R +EF+A+ R ++ SDV RGMD+PD++ VVQ+G+P ++ QY+HR+GR
Sbjct: 307 HSRMSQTQRTRTVDEFKATDRGLMFASDVVGRGMDFPDISLVVQIGVPGEKNQYVHRVGR 366
Query: 722 TGREGKEGEGVLLLAPWEEYFLDDLKDLPLDKLQLPHLNPEIQLQ-----MDNHMAKIDN 776
TGR GK G V++LAP E +F++ + P+ K + P +P+ L + + +AK+
Sbjct: 367 TGRAGKLGRAVMILAPEEMWFVEKHPEFPI-KNEGPFTHPKASLYPSRDIIQSALAKVPL 425
Query: 777 NVKEAAYHAWLGYYNS-IREIGRDKTTLVELANKFAQSIGLQRPPPLFRKTALKMGLKDI 835
KE AY LG+ S ++ G D+ +V+LAN+FA++ G P L KMGL+ +
Sbjct: 426 ETKEQAYTGNLGFIKSMMKRYGLDRARVVDLANRFARAFGCPAIPELNPVVVAKMGLRGV 485
Query: 836 PGIRLR 841
PG+ L+
Sbjct: 486 PGLVLQ 491
>gi|440473582|gb|ELQ42370.1| ATP-dependent RNA helicase MSS116 [Magnaporthe oryzae Y34]
gi|440481429|gb|ELQ62018.1| ATP-dependent RNA helicase MSS116 [Magnaporthe oryzae P131]
Length = 568
Score = 267 bits (683), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 178/473 (37%), Positives = 254/473 (53%), Gaps = 49/473 (10%)
Query: 399 YIQMTRVQEATLSACLEGK-DAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLVPPIY 457
+ +M+ VQ AT+ + + D + +AKTGTGK+IAFLLPA++ +L+ SS +
Sbjct: 97 FDRMSPVQAATIRHLIADRGDVLAQAKTGTGKTIAFLLPALQTLLRRPSSRGND----VS 152
Query: 458 VLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILVATPGR 517
VL++ PTRELA QIA EA ALL+ V T +GGT +QRR+ CQIL+ TPGR
Sbjct: 153 VLVISPTRELALQIAKEAEALLQRLPQYKVCTAIGGTNKDAEQRRILRG-CQILIGTPGR 211
Query: 518 LLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRR----RQSLLFSA 573
L+DH+E +S ++ L + VLDEAD LLD+GF ++ IV LP R RQ +LFSA
Sbjct: 212 LMDHLEEQS-VAEMLQSVDTFVLDEADRLLDMGFMPQLKKIVAALPNRQKVPRQGMLFSA 270
Query: 574 TMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSCLVAPH-----ELHFQILHHLL 622
T+ + + L ++ +I T+ G T ++ Q + P+ L H L
Sbjct: 271 TVAEHVAKVSSIALAPDYKFISTIPKGESNTHERVPQHLIEVPNFSDTMAALVGALRHEL 330
Query: 623 KEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVR--EMYSRKPQLYRDRISEEFRAS 680
E ++K IVF T + +L + R ++SR Q R R++E++R S
Sbjct: 331 AESA-NQDEFKAIVFAPTAALVDFYAAVLEGLPNMPRILTLHSRMTQSKRTRVTEDYRKS 389
Query: 681 KRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLAPWEE 740
+LV +DV ARGMD+P VT+V QVG+P D+E YIHRLGRT R G EG G +++ E
Sbjct: 390 NATVLVATDVVARGMDFPSVTNVFQVGLPMDKESYIHRLGRTARAGAEGRGTFIVSAAES 449
Query: 741 YF----LDDLK--DLPLDKLQLPHLN---PEIQLQMDNHMAKIDNNVKEAAYHAWLGYYN 791
YF + D D P D L + P+++L AY +WLG+Y
Sbjct: 450 YFPRKVMKDFTFIDQPADLSALGEIKEVAPKLELY-------------GKAYQSWLGFYK 496
Query: 792 SI-REIGRDKTTLVELANKFA-QSIGLQRPPPLFRKTALKMGLKDIPGIRLRK 842
+ +G D LV ANK A + G PPL + T KMGLK + G+ + K
Sbjct: 497 VFTKPLGWDNEQLVREANKLALEGFGAPEVPPLNKSTVGKMGLKGVKGLVVVK 549
>gi|154276582|ref|XP_001539136.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150414209|gb|EDN09574.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 680
Score = 267 bits (683), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 196/530 (36%), Positives = 266/530 (50%), Gaps = 67/530 (12%)
Query: 369 KREEEPILSQKRFDECG----ISPLTIKALTAAGYIQ-MTRVQEATLSACLEGKDAVVKA 423
K EEP +F E +S I+ LT I MT VQ T++A L G D + +A
Sbjct: 66 KEVEEPPAELTQFSELASNGLVSDNIIRVLTNKMNITTMTDVQRMTINATLNGSDVLAQA 125
Query: 424 KTGTGKSIAFLLPAIEAVLKATS-------SSTTQLVPPIYVLILCPTRELASQIAAEAI 476
KTGTGK++AFLLP I+ +LK S I +I+ PTRELA QIA EA
Sbjct: 126 KTGTGKTLAFLLPVIQNILKDQHLAQRPRFSRNQTDASDIRAIIISPTRELAEQIAVEAR 185
Query: 477 ALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLK 536
L+ N I V T VGGT+ + R++ D C ILV TPGRL+D + + V L
Sbjct: 186 KLVSN-TSIIVQTAVGGTKKREGLMRIQRDGCHILVGTPGRLIDIFSDPNS-GVAAPKLS 243
Query: 537 MLVLDEADHLLDLGFRKDVENIVDCLPRRR----QSLLFSATMPKELV------LKREHT 586
LVLDEAD LLD+GF D++ + LP RR Q+L+FSAT+P+E++ +KR+
Sbjct: 244 ALVLDEADRLLDIGFAPDIQELQTFLPHRRDVDRQTLMFSATVPREVMSMVRQTMKRDFA 303
Query: 587 YIDTVGLGSVETPVKIKQSCLV---------APHELHFQILHHLLKEHILGTPDYKVIVF 637
++ TV + T + + Q + A EL Q + + P ++ F
Sbjct: 304 FVKTVQEDEIPTHLTVPQKAIFLRGMENQLPAIFELAKQGIEKHRSDPANNMPFKAIVYF 363
Query: 638 CSTGMVTSLLYLLLREMKMNVR------------EMYSRKPQLYRDRISEEFRASKRLIL 685
ST VT L M+ + EM+SR Q R R S FR+SK IL
Sbjct: 364 NSTAEVT-LAKQAFAAMRSSASSFSHPLPDTQSYEMHSRLTQDQRTRFSNMFRSSKSAIL 422
Query: 686 VTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLAPWEEYFL-D 744
+SDV+ARGMD+PDVT V+Q+GIP DRE YIHRLGRT R K+GEG L + L
Sbjct: 423 FSSDVTARGMDFPDVTHVIQIGIPRDRETYIHRLGRTARANKKGEGWLFTLDLDSGNLRR 482
Query: 745 DLKDLPLD---------------KLQLPHLNPEIQLQMDNHMAKIDNNVKEAAYHAWLGY 789
L+DLP+ + P +I Q+ + + K AAY A+LG
Sbjct: 483 TLRDLPIQIDDSSLLTAAADMTTDIGHPPWVSDIFSQVKSGFKTVSIKDKSAAYAAYLGV 542
Query: 790 YNSIREIGRDKTTLVELANKFA-QSIGLQRPPPLFRKTALKMGLKDIPGI 838
+ I RDK +V L N+ + GL+ PP TA K+G K +PG+
Sbjct: 543 MSHI----RDKFEVVRLINQLSTHGWGLREPPAFSATTAYKLGYKGVPGL 588
>gi|159479738|ref|XP_001697947.1| hypothetical protein CHLREDRAFT_105835 [Chlamydomonas reinhardtii]
gi|158274045|gb|EDO99830.1| predicted protein [Chlamydomonas reinhardtii]
Length = 366
Score = 267 bits (682), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 160/365 (43%), Positives = 217/365 (59%), Gaps = 19/365 (5%)
Query: 399 YIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLVPPIYV 458
Y + + VQ A++ CL D + KAKTGTGK++AF++P IE VL + +
Sbjct: 9 YERCSLVQAASIPVCLGPDDVIAKAKTGTGKTLAFVIPTIEKVLANRAPRGK-----VSA 63
Query: 459 LILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILVATPGRL 518
L+L PTRELA QI E +L H G+ + + GG K + R L IL+ATPGR
Sbjct: 64 LVLSPTRELARQIQTETHKMLTYHPGLHSMVVYGGVDVKKNLRALVQKMPDILIATPGRC 123
Query: 519 LDHIENKS--GLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLP--RRRQSLLFSAT 574
D + L+ L ++LVLDEAD+LLD+GFR + I+ LP +RQ+ LFSAT
Sbjct: 124 WDIMTQAHDRSLTTVLDSTRVLVLDEADNLLDMGFRPQISKILSALPPTTQRQTFLFSAT 183
Query: 575 MPKEL------VLKREHTYIDTVGLGSVETPVKIKQSCLV-APHELHFQILHHLLKEHIL 627
P ++ LKR+H+Y+D VG V T ++ S LV A ++ Q+L LL +H+
Sbjct: 184 FPSDVKSLADVALKRQHSYVDAVG-EDVATHEHVEASSLVVAKRDVMLQLLG-LLAQHMA 241
Query: 628 GTPDYKVIVFCSTGMVTSLLYLLLREMKMN-VREMYSRKPQLYRDRISEEFRASKRLILV 686
PDYKVIVF T +T++ + V EM+SRK Q RD+ S FRA R+I+
Sbjct: 242 EEPDYKVIVFLPTAHLTAMFAEAFSAAGLGGVIEMHSRKSQPQRDKASALFRAENRMIMF 301
Query: 687 TSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLAPWEEYFLDDL 746
+SDVSARG+DYP VT VVQ G P +REQYIHR GRTGR G+ G+ LLL+ +E FL+ L
Sbjct: 302 SSDVSARGVDYPGVTYVVQCGAPANREQYIHRAGRTGRAGRAGQCTLLLSDFERPFLNKL 361
Query: 747 KDLPL 751
DLP+
Sbjct: 362 GDLPI 366
>gi|325090289|gb|EGC43599.1| ATP-dependent RNA helicase MSS116 [Ajellomyces capsulatus H88]
Length = 680
Score = 266 bits (680), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 196/530 (36%), Positives = 266/530 (50%), Gaps = 67/530 (12%)
Query: 369 KREEEPILSQKRFDECG----ISPLTIKALTAAGYIQ-MTRVQEATLSACLEGKDAVVKA 423
K EEP +F E +S I+ LT I MT VQ T++A L G D + +A
Sbjct: 66 KEVEEPPAELTQFSELASNGLVSDNIIRVLTNKMNITTMTDVQRMTINATLNGSDVLAQA 125
Query: 424 KTGTGKSIAFLLPAIEAVLKATS-------SSTTQLVPPIYVLILCPTRELASQIAAEAI 476
KTGTGK++AFLLP I+ +LK S I +I+ PTRELA QIA EA
Sbjct: 126 KTGTGKTLAFLLPVIQNILKDQHLAQRPRFSRNQTDASDIRAIIISPTRELAEQIAVEAR 185
Query: 477 ALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLK 536
L+ N I V T VGGT+ + R++ D C ILV TPGRL+D + + V L
Sbjct: 186 KLVSN-TSIIVQTAVGGTKKREGLMRIQRDGCHILVGTPGRLIDIFSDPNS-GVAAPKLS 243
Query: 537 MLVLDEADHLLDLGFRKDVENIVDCLPRRR----QSLLFSATMPKELV------LKREHT 586
LVLDEAD LLD+GF D++ + LP RR Q+L+FSAT+P+E++ +KR+
Sbjct: 244 ALVLDEADRLLDIGFAPDIQELQTYLPHRRDVDRQTLMFSATVPREVMSMVRQTMKRDFA 303
Query: 587 YIDTVGLGSVETPVKIKQSC---------LVAPHELHFQILHHLLKEHILGTPDYKVIVF 637
++ TV + T + + Q L A EL Q + + P ++ F
Sbjct: 304 FVKTVQEDEIPTHLTVPQKAVFLRGMENQLPAIFELAKQGIEKHRSDPANNMPFKAIVYF 363
Query: 638 CSTGMVTSLLYLLLREMKMNVR------------EMYSRKPQLYRDRISEEFRASKRLIL 685
ST VT L M+ + EM+SR Q R R S FR+SK IL
Sbjct: 364 NSTAEVT-LAKQAFAAMRSSASSFSHPLPDTQSYEMHSRLTQDQRTRFSNMFRSSKSAIL 422
Query: 686 VTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLAPWEEYFL-D 744
+SDV+ARGMD+PDVT V+Q+GIP DRE YIHRLGRT R K+GEG L + L
Sbjct: 423 FSSDVTARGMDFPDVTHVIQIGIPRDRETYIHRLGRTARANKKGEGWLFTLDLDSGNLRR 482
Query: 745 DLKDLPLD---------------KLQLPHLNPEIQLQMDNHMAKIDNNVKEAAYHAWLGY 789
L+DLP+ + P +I Q+ + + K AAY A+LG
Sbjct: 483 ALRDLPIQVDDSSLLTAAADMTTDIGHPPWVSDIFSQVKSGFKTVSIKDKSAAYAAYLGV 542
Query: 790 YNSIREIGRDKTTLVELANKFA-QSIGLQRPPPLFRKTALKMGLKDIPGI 838
+ I RDK +V + N+ + GL+ PP TA K+G K +PG+
Sbjct: 543 MSHI----RDKFEVVRIINQLSTHGWGLREPPAFSATTAYKLGYKGVPGL 588
>gi|171693265|ref|XP_001911557.1| hypothetical protein [Podospora anserina S mat+]
gi|170946581|emb|CAP73382.1| unnamed protein product [Podospora anserina S mat+]
Length = 617
Score = 266 bits (679), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 167/473 (35%), Positives = 252/473 (53%), Gaps = 39/473 (8%)
Query: 386 ISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKAT 445
I+P ++ + G M+ VQE L D +V+AKTGTGK+IAFLLPA++ ++ A
Sbjct: 86 IAPQLLQNIEKMGLTHMSPVQEKVLQMSSLKNDCLVQAKTGTGKTIAFLLPALQNIMTAP 145
Query: 446 SSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLES 505
+ +L+L PTRELA QIA E L VGGT RR +
Sbjct: 146 DLQREF----VAILVLAPTRELAQQIADECDKL--TGKSFECHIAVGGTSKNSLLRRFLN 199
Query: 506 DPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRR 565
ILVATPGRL+D++ + +L L+ +VLDEAD +LD GF ++ I+ +P++
Sbjct: 200 GKPTILVATPGRLIDYLSEEETRH-KLTKLRCVVLDEADRMLDQGFAPSIKRILQQIPKK 258
Query: 566 R----QSLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHEL-H 614
+ Q + FSAT+P E LVL ++H I T+ T +I QS + P
Sbjct: 259 QTAGWQGMCFSATVPDEIQQFLPLVLNKKHDRISTIDPNETPTVDRIPQSAIPIPSIADA 318
Query: 615 FQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK------MNVREMYSRKPQL 668
+LH L P+ K ++FC T +LLY + ++ +M+SR Q
Sbjct: 319 LPVLHSYLMTQKKTNPELKAVIFCGTARHAALLYHIFGPTGGAAPKGLSCFQMHSRLSQP 378
Query: 669 YRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKE 728
R R EEF+ ++ ++ SDV RGMD+PD+ V+Q+G PP++ QY+HR+GRTGR GK
Sbjct: 379 ARTRTIEEFKNAESGLMFASDVIGRGMDFPDIDLVIQMGFPPEKAQYVHRVGRTGRAGKS 438
Query: 729 GEGVLLLAPWEEYFLDDLKDLPLDKLQLPHLNPEIQLQMDNHMAKIDNNVKEAAYHAWLG 788
GE ++L P E F+ KD P ++++ +AK+ K AY A+LG
Sbjct: 439 GEATMILTPQEMRFVRANKDFP--------------IKIEEALAKVPELTKFQAYTAFLG 484
Query: 789 YYNSI-REIGRDKTTLVELANKFAQSIGLQRPPPLFRKTALKMGLKDIPGIRL 840
+ ++ R++G +V LAN+FA ++G + P + K KMGLK +PG+R+
Sbjct: 485 FNITVARQLGLQPPEIVGLANEFAYAMGYEEIPEVEAKMVGKMGLKGVPGLRI 537
>gi|400599991|gb|EJP67682.1| ATP-dependent RNA helicase MSS116 [Beauveria bassiana ARSEF 2860]
Length = 656
Score = 265 bits (678), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 182/506 (35%), Positives = 269/506 (53%), Gaps = 34/506 (6%)
Query: 361 NGNGEKKEKREEEPILSQKRFDECG----ISPLTIKALTA-AGYIQMTRVQEATLSACLE 415
+G K E L RF + + P I+ +T + M VQ ATL L
Sbjct: 142 GADGSYKPPLTEAVPLDTPRFADLAGQNLVHPQIIQTITEDLKFDHMMPVQAATLWELLP 201
Query: 416 GK--DAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAA 473
K D +V+AKTGTGK++AFLLPA++ +L T + I +L++ PTRELA QIA
Sbjct: 202 PKRSDCLVQAKTGTGKTVAFLLPALQTMLSKTRGAGADRDSAISLLVISPTRELAMQIAT 261
Query: 474 EAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLM 533
EA LL+ V +GGT ++R++ D C +L+ATPGRL+DH+ N+ + L
Sbjct: 262 EANNLLQRLPNYRVRVAIGGTNKDREERQI-LDGCDVLIATPGRLIDHMSNED-IIYALR 319
Query: 534 GLKMLVLDEADHLLDLGFRKDVENIVDCLPRR----RQSLLFSATMPKE------LVLKR 583
L LVLDEAD LLD+GF + IV LP R RQ +LFSAT+ LVL
Sbjct: 320 SLDTLVLDEADRLLDMGFMPALREIVGKLPDRKAHPRQGMLFSATIAPHVKQVAGLVLVP 379
Query: 584 EHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQI-LHHLLKEHILGTPDYKVIVFCSTGM 642
+ +I T+ G T ++ Q + P + +++ ++K IVF T
Sbjct: 380 GYKFISTIPEGEANTHERVPQHLIKVPSFASVSAGMVGAVRQEAAREANFKAIVFAPTAA 439
Query: 643 VTSLLYLLLREMK--MNVREMYSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDV 700
L +L ++ V ++SR Q R +++ EFR +K IL +DV ARGMD+P V
Sbjct: 440 AAGLYGHVLSQIPGLPPVSTLHSRMTQNRRTKVTNEFRDAKSAILTATDVIARGMDFPGV 499
Query: 701 TSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLAPWEEYF----LDDLKDLPLDKLQL 756
T+V QVGIP +++ YIHRLGRT R EG+G+ L+A E +F L ++ +P +
Sbjct: 500 TTVFQVGIPSEKQSYIHRLGRTARADAEGKGIFLIAEAEAFFPRWTLKEITFVPQEA--- 556
Query: 757 PHLNPEIQLQMDNHMAKIDNNVKEAAYHAWLGYYNS-IREIGRDKTTLVELANKFA-QSI 814
+ ++D +A++D K Y AWLGYYN+ ++ + DK LV AN +A +++
Sbjct: 557 ---DLSAAPEVDRILAQMDEEEKGQIYKAWLGYYNNHMKGLHWDKEELVRQANTYAREAL 613
Query: 815 GLQRPPPLFRKTALKMGLKDIPGIRL 840
G PP+ R T KMGL+ + G+ +
Sbjct: 614 GAPETPPIQRSTVSKMGLRGVRGLNI 639
>gi|449295605|gb|EMC91626.1| hypothetical protein BAUCODRAFT_143167 [Baudoinia compniacensis
UAMH 10762]
Length = 551
Score = 265 bits (678), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 175/478 (36%), Positives = 272/478 (56%), Gaps = 39/478 (8%)
Query: 391 IKALTAAGYIQMTRVQEATLSACLE-GKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSST 449
+KAL GY MT VQ+ TL+ D +V+AKTGTGK+IAFLLPA+ ++L +
Sbjct: 33 LKALDVMGYQYMTPVQQKTLTELPSFSADCLVQAKTGTGKTIAFLLPALHSLLTERTVPV 92
Query: 450 TQLVPPIYVLILCPTRELASQIAAEAIAL-------LKNHDGIGVLTLVGGTRFKVDQRR 502
Q + +LI+ PTRELA QIA E AL L+ H G G ++ + +
Sbjct: 93 GQ----VGILIISPTRELALQIAKECDALTSQLPRRLECHTAFG-----GTSKDRHLKEF 143
Query: 503 LESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCL 562
L P +LVATPGRL D++ + ++ + ++ ++LDEAD +L+ GF VE I+ L
Sbjct: 144 LNGKPS-VLVATPGRLNDYLSDNY-VAEKFTDIRTVILDEADTMLEAGFLPAVEQILRRL 201
Query: 563 PRRR---QSLLFSATMPKEL------VLKREHTYIDTVGLGSVETPVKIKQSCLVAPH-E 612
P + Q + FSAT+P+++ VLK +T++ TV V T ++ Q +V P
Sbjct: 202 PPKSKGWQGMCFSATIPEKIKTVLGRVLKPGYTHLTTVDPNEVPTIDQVIQYSVVIPDVS 261
Query: 613 LHFQILHHLLKEHILGTP-DYKVIVFCSTGMVTSLLYLLLREMKMNVREMY---SRKPQL 668
F L+ LL++ +P D+K IVF ST + L+ L ++ N ++Y SR Q
Sbjct: 262 QTFTALYTLLEQERQHSPHDFKAIVFGSTANGIAHLHALFEQLLGNTVKVYQLQSRLSQS 321
Query: 669 YRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKE 728
R R +EEF+ + I+ SDV RGMD+P VVQVG+P D+EQY+HR+GRT R G +
Sbjct: 322 ARTRTTEEFKQASSGIMFASDVIGRGMDFPGTGLVVQVGLPTDKEQYVHRVGRTARAGTD 381
Query: 729 GEGVLLLAPWEEYFLDDLKDLPLD--KLQLP---HLNPEIQLQMDNHMAKIDNNVKEAAY 783
G V+LL E YFL K LP+ + +P +PEI+ ++ N ++ +D + AY
Sbjct: 382 GRAVILLTQQESYFLHINKHLPIQPYPVNIPATVSAHPEIEQRVHNAVSAVDEKTVQKAY 441
Query: 784 HAWLGYYNS-IREIGRDKTTLVELANKFAQSIGLQRPPPLFRKTALKMGLKDIPGIRL 840
A+LG++ + ++++ D LVE+AN +A+++G PP + ++ KMGL+ + G+ +
Sbjct: 442 QAYLGFHKTFMKQLRTDAAGLVEIANSYARAMGCAEPPVIDKQVVGKMGLRGVRGLNV 499
>gi|295671476|ref|XP_002796285.1| ATP-dependent RNA helicase mss116 [Paracoccidioides sp. 'lutzii'
Pb01]
gi|226284418|gb|EEH39984.1| ATP-dependent RNA helicase mss116 [Paracoccidioides sp. 'lutzii'
Pb01]
Length = 679
Score = 264 bits (675), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 191/534 (35%), Positives = 277/534 (51%), Gaps = 70/534 (13%)
Query: 370 REEEPILSQKRFDECG----ISPLTIKALTAAGYIQ-MTRVQEATLSACLEGKDAVVKAK 424
+E E +F E +S I+ LT I MT VQ T++A L G D + +AK
Sbjct: 66 KESEAPTEYTQFSELATDGLVSDNVIRVLTNKMNITTMTEVQRMTINATLNGSDVLAQAK 125
Query: 425 TGTGKSIAFLLPAIEAVLK-------ATSSSTTQLVPPIYVLILCPTRELASQIAAEAIA 477
TGTGK++AFL+P ++ +LK A ++ + I LI+ PTRELA QIA EA
Sbjct: 126 TGTGKTLAFLIPVVQNILKDQQLAQRARNNRSRSNASDIRALIISPTRELAEQIAVEAKK 185
Query: 478 LLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIEN-KSGLSVRLMGLK 536
L+ N I V T VGGTR + R++ + C ILV TPGRL+D + SG+S L
Sbjct: 186 LVSNTSVI-VQTAVGGTRKREGLMRIQHEGCHILVGTPGRLIDIFSDPTSGVSA--PKLS 242
Query: 537 MLVLDEADHLLDLGFRKDVENIVDCLPRR----RQSLLFSATMPKELV------LKREHT 586
LVLDEAD LLD+GF D++ + LPRR RQ+L+FSAT+PKE++ +K++ T
Sbjct: 243 ALVLDEADRLLDIGFAPDIQELQSYLPRRQDVDRQTLMFSATVPKEVMAMVRQTMKQDFT 302
Query: 587 YIDTVGLGSVETPVKIKQSCLVAPHELHFQI--LHHLLKEHI-------LGTPDYKVIVF 637
++ TV T + + Q LV L Q+ + L K+++ +K IV+
Sbjct: 303 FVKTVKEDETPTHLAVPQK-LVYLRGLENQLPAIFELAKQNVENHKNDPANVKPFKAIVY 361
Query: 638 CSTGMVTSLLYLLLREMKMNVR-------------EMYSRKPQLYRDRISEEFRASKRLI 684
++ L M+ ++ EM+SR Q R R S FR + I
Sbjct: 362 FNSTAEVGLARQAFSAMRYDLSSDSDHPLPDVQCYEMHSRLTQDQRTRFSGLFRKASSAI 421
Query: 685 LVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLAPWE-EYFL 743
L +SDV+ARGMD+PDVT V+Q+G+P DRE YIHRLGRT R K+GEG + P E +
Sbjct: 422 LFSSDVTARGMDFPDVTHVIQIGVPRDRETYIHRLGRTARANKKGEGWIFTLPLESDNVR 481
Query: 744 DDLKDLPLDKLQLPHLNPEIQLQMDN----HMAKIDNNVKEA-----------AYHAWLG 788
L+ LP+ L + ++ H++ I + VK+ AY A+LG
Sbjct: 482 RQLRGLPIRSDSSSLLTASADMTTEDGHPPHVSDIFSKVKDGFKTVSIKQKSNAYAAYLG 541
Query: 789 YYNSIREIGRDKTTLVELANKFA-QSIGLQRPPPLFRKTALKMGLKDIPGIRLR 841
+ RDK +V+ N+ A GL+ PP TA ++G ++IPG+ +R
Sbjct: 542 TLAQL----RDKYEVVQCINQLATHGWGLRDPPAFSSVTAARLGYRNIPGLNVR 591
>gi|302886988|ref|XP_003042383.1| hypothetical protein NECHADRAFT_51970 [Nectria haematococca mpVI
77-13-4]
gi|256723293|gb|EEU36670.1| hypothetical protein NECHADRAFT_51970 [Nectria haematococca mpVI
77-13-4]
Length = 565
Score = 263 bits (672), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 180/488 (36%), Positives = 272/488 (55%), Gaps = 36/488 (7%)
Query: 376 LSQKRFD----ECGISPLTIKALTA-AGYIQMTRVQEATLSACLEG--KDAVVKAKTGTG 428
L +RFD + + PL I+ +T G+ MT VQ AT+ L D +V+AKTGTG
Sbjct: 67 LGTRRFDGLLEQNQVHPLVIRTITEDMGFEFMTPVQAATVDELLPPNRSDCLVQAKTGTG 126
Query: 429 KSIAFLLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVL 488
K++AFLLPA++ +L + + I +L++ PTRELA QI+ EA LL+ V
Sbjct: 127 KTMAFLLPALQTML----TENRPVDAGISLLVISPTRELAMQISTEATKLLQRLPRYRVQ 182
Query: 489 TLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLD 548
+GGT +++++ S C IL+ATPGRLLDH+ N+ + L + LVLDEAD LLD
Sbjct: 183 IAIGGTNKDREEKQILSG-CDILIATPGRLLDHLSNEE-IVYSLRNVNSLVLDEADRLLD 240
Query: 549 LGFRKDVENIVDCLPRR----RQSLLFSATMPKE------LVLKREHTYIDTVGLGSVET 598
+GF KD+ IV+ LP + RQ +LFSAT+ LVL + +I T+ G V T
Sbjct: 241 MGFMKDLREIVNRLPDKKDTNRQGMLFSATIAPHVQQVAGLVLAPGYKFISTIPAGEVNT 300
Query: 599 PVKIKQSCLVAP-HELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKM- 656
++ Q + P + +++ + +K I+F T + +L +
Sbjct: 301 HERVPQFLVEVPTFGAVAAAMAGCVRQEAAQSGTFKAILFAPTAALADFYGQILSALPGL 360
Query: 657 -NVREMYSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQY 715
V ++SR Q R +I+ E+R S ILV +DV ARGMD+P VT+V+QVG+P D++ Y
Sbjct: 361 PPVSVLHSRMSQNKRTKITNEYRDSSSSILVATDVVARGMDFPGVTTVIQVGLPADKQSY 420
Query: 716 IHRLGRTGREGKEGEGVLLLAPWEEYFLDDLKDLPLDKLQLPHLNPEIQL--QMDNHMAK 773
IHRLGRT R +G GVL+++ E +F L ++ L P++ L ++ + K
Sbjct: 421 IHRLGRTARADADGRGVLIVSAAEAWF----PKWSLKEITLRPREPDLSLAGEVLSIAEK 476
Query: 774 IDNNVKEAAYHAWLGYYNS-IREIGRDKTTLVELANKFAQSIGLQRP--PPLFRKTALKM 830
++ + K Y AWLGYYN+ ++ + DK LV AN +A+ GL P P + + TA KM
Sbjct: 477 MEEDDKARIYQAWLGYYNNYLKNLKWDKVELVRQANVYARE-GLGSPDTPSIAKTTAGKM 535
Query: 831 GLKDIPGI 838
GL+ + G+
Sbjct: 536 GLRGVKGL 543
>gi|346319028|gb|EGX88630.1| ATP-dependent RNA helicase MSS116 [Cordyceps militaris CM01]
Length = 585
Score = 263 bits (671), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 190/498 (38%), Positives = 270/498 (54%), Gaps = 40/498 (8%)
Query: 371 EEEPILSQKRFDECG---ISPLTIKALTA-AGYIQMTRVQEATLSACLEG--KDAVVKAK 424
E P+ + + D G + PL I+ +T + M VQ ATL L D +V+AK
Sbjct: 83 EAVPLDTPRFADLAGQNLVHPLLIQTITDDLKFNHMMPVQAATLWELLPPNRSDCLVQAK 142
Query: 425 TGTGKSIAFLLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDG 484
TGTGK++AFLLPA++ +L + S I +L++ PTRELA QIAAEA +LL+
Sbjct: 143 TGTGKTVAFLLPALQTML-SKSRGGNGAESTISLLVISPTRELAMQIAAEASSLLQRMPR 201
Query: 485 IGVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEAD 544
V +GGT ++R L C +L+ATPGRLLDH+ N+ L L L LVLDEAD
Sbjct: 202 YKVRIAIGGTNKDREERMLHEG-CDVLIATPGRLLDHMANEDVLYA-LRALDTLVLDEAD 259
Query: 545 HLLDLGFRKDVENIVDCLPRR----RQSLLFSATMPKE------LVLKREHTYIDTVGLG 594
LLD+GF + +IV LP R RQ +LFSAT+ LVL+ + +I T+ G
Sbjct: 260 RLLDMGFMPALRDIVGKLPNRAQVPRQGMLFSATIAPHVKQVAGLVLQTGYKFISTIAEG 319
Query: 595 SVETPVKIKQSCLVAPHELHFQI-LHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLRE 653
T ++ Q + P + ++ P+ K IVF T + L +L +
Sbjct: 320 EAGTHERVPQHLIKVPSFSSVAAGMVGAVRAEAAREPNLKAIVFAPTAALAGLYGHVLGQ 379
Query: 654 MK--MNVREMYSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPD 711
+ V ++SR Q R +++ E+R +K IL +DV ARGMD+P VT+V QVGIP +
Sbjct: 380 IPGLPPVSTLHSRMTQNRRTKVTNEYRDAKSAILTATDVVARGMDFPGVTTVFQVGIPSE 439
Query: 712 REQYIHRLGRTGREGKEGEGVLLLAPWEEYF----LDDLKDLPLDKLQLPHLN--PEIQL 765
++ YIHRLGRT R EG+G+ L+A E +F L ++ +P Q L+ PEI+
Sbjct: 440 KQSYIHRLGRTARADAEGKGIFLIAEAEAFFPRWTLKEIAFVP----QEADLSAAPEIER 495
Query: 766 QMDNHMAKIDNNVKEAAYHAWLGYYNS-IREIGRDKTTLVELANKFAQSIGLQRP--PPL 822
MD +D K Y AWLGYYN+ ++ + DK LV AN +A+ GL P PP+
Sbjct: 496 IMDG----MDEEEKGQIYKAWLGYYNNHMKGLHWDKEELVRQANTYARE-GLSAPETPPI 550
Query: 823 FRKTALKMGLKDIPGIRL 840
R T KMGL+ G+ +
Sbjct: 551 QRSTVGKMGLRGTRGLNI 568
>gi|367025087|ref|XP_003661828.1| hypothetical protein MYCTH_2301677 [Myceliophthora thermophila ATCC
42464]
gi|347009096|gb|AEO56583.1| hypothetical protein MYCTH_2301677 [Myceliophthora thermophila ATCC
42464]
Length = 568
Score = 263 bits (671), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 179/480 (37%), Positives = 261/480 (54%), Gaps = 45/480 (9%)
Query: 391 IKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTT 450
++AL+ G+ MT VQE L + +DA+V+AKTGTGK++AFLLPA++ +L+A +
Sbjct: 23 LQALSNHGFHYMTPVQEKVLRRPVFTQDALVQAKTGTGKTLAFLLPALQTLLEAKDLDVS 82
Query: 451 QLVPPIYVLILCPTRELASQIAAEAIAL-------LKNHDGIGVLTLVGGTRFKVDQRRL 503
+ +L+L PTRELA QI E L L+ H +G G +R R L
Sbjct: 83 C----VGLLVLAPTRELAQQIKGECDKLTGECSRPLECHIAVG-----GSSRHSHLTRFL 133
Query: 504 ESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLP 563
P ILVATPGRLLD++ ++ +L ++ +VLDEAD +LD GF ++ I++ +P
Sbjct: 134 RGKP-TILVATPGRLLDYLGEEAARQ-KLAKIRCVVLDEADRMLDAGFAPALKQILEKIP 191
Query: 564 RRRQ----SLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSCL-VAPHE 612
+ Q + FSAT+P E +VL ++H I T+ T + Q+ V
Sbjct: 192 PKAQLGWQGMCFSATVPPEIKKMLPMVLSKDHVRISTMDENEAPTIDTVPQTVHPVGSVA 251
Query: 613 LHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREM------KMNVREMYSRKP 666
LH +L P K ++FC T LLY + K+ V +M SR
Sbjct: 252 DVLPTLHSVLSCARADNPRLKAVIFCPTARHAGLLYHVFGHTGGAAPPKLPVFQMQSRMS 311
Query: 667 QLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREG 726
Q R R +EF+ + R +L SDV RGMD+PDV VVQVG+P + +QY+HR+GRTGR G
Sbjct: 312 QPQRTRTVQEFKETDRGLLFASDVVGRGMDFPDVDLVVQVGVPSETDQYVHRVGRTGRAG 371
Query: 727 KEGEGVLLLAPWEEYFLDDLKDLPL-DKLQLPHLNPEIQLQ-----MDNHMAKIDNNVKE 780
K G+ V++LAP E +F+ + P+ D + H P+ QL + + +AK+ K
Sbjct: 372 KSGQAVMILAPEEMWFVRENPQFPIKDGGKFTH--PKAQLYPSAEIIQSALAKVPQQTKI 429
Query: 781 AAYHAWLGYYNSI-REIGRDKTTLVELANKFAQSIGL-QRPPPLFRKTALKMGLKDIPGI 838
AY A LG+ NS+ R G D+ +V LAN+FA + G PP L T KMGL+ +PG+
Sbjct: 430 QAYVANLGFINSLMRRYGLDQAGVVALANRFAAAFGCGDAPPALSPATVGKMGLRGVPGL 489
>gi|239607182|gb|EEQ84169.1| DEAD box RNA helicase HelA [Ajellomyces dermatitidis ER-3]
gi|327351142|gb|EGE79999.1| DEAD box RNA helicase HelA [Ajellomyces dermatitidis ATCC 18188]
Length = 696
Score = 262 bits (670), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 196/535 (36%), Positives = 268/535 (50%), Gaps = 70/535 (13%)
Query: 369 KREEEPILSQKRFDECG----ISPLTIKALTAAGYIQ-MTRVQEATLSACLEGKDAVVKA 423
K EE +F E IS I+ +T I MT VQ T++A L G D + +A
Sbjct: 66 KEAEEAPCELTQFSELASNGLISDNVIRVITNQMNITTMTDVQRMTINATLNGSDVLAQA 125
Query: 424 KTGTGKSIAFLLPAIEAVLKATS-------SSTTQLVPPIYVLILCPTRELASQIAAEAI 476
KTGTGK++AFLLP ++ +LK S I +I+ PTRELA QIA EA
Sbjct: 126 KTGTGKTLAFLLPVVQNILKDQQLAQRPRFSHNQTDASDIRAIIISPTRELAEQIAVEAK 185
Query: 477 ALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIEN-KSGLSVRLMGL 535
++ N I V T VGGTR + R++ D C ILV TPGRL+D + SG+S L
Sbjct: 186 KIVSN-TSIIVQTAVGGTRKREGLMRIQRDGCHILVGTPGRLIDIFSDPNSGVSAP--KL 242
Query: 536 KMLVLDEADHLLDLGFRKDVENIVDCLPRRR----QSLLFSATMPKELV------LKREH 585
LVLDEAD LLD+GF D++ + LPRRR Q+L+FSAT+P+E++ +KR+
Sbjct: 243 SALVLDEADRLLDIGFAPDIQELQTYLPRRREVDRQTLMFSATVPREVMSMVRQTMKRDF 302
Query: 586 TYIDTVGLGSVETPVKIKQSCLVA-PHELHFQILHHLLKEHIL---GTPD----YKVIVF 637
T++ TV T + + Q +V E + L K+ I PD +K IV+
Sbjct: 303 TFVKTVQEDETPTHLAVPQKHVVLRGMENQLPAILELAKQGIEKHEQDPDNNMPFKAIVY 362
Query: 638 CSTGMVTSLLYLLLREMKMNVR-------------EMYSRKPQLYRDRISEEFRASKRLI 684
++ +L M+ N EM+SR Q R R S FR SK I
Sbjct: 363 FNSTAEVTLAKQAFAAMRSNTSTHSSHPLPDTPSYEMHSRLSQEQRTRFSTMFRKSKSAI 422
Query: 685 LVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLAPWE----- 739
L +SDV+ARGMD+PDVT V+Q+GIP DRE YIHRLGRT R K+GEG L E
Sbjct: 423 LFSSDVTARGMDFPDVTHVIQMGIPRDRETYIHRLGRTARANKKGEGWLFTLDLEIGNLR 482
Query: 740 ------------EYFLDDLKDLPLDKLQLPHLNPEIQLQMDNHMAKIDNNVKEAAYHAWL 787
L D+ D PH++ +I ++ + + K AY A+L
Sbjct: 483 RTLGGLPIQSDSHSLLTATADMSTDIGHPPHVS-DIFSKVKDGFRMVPMKDKSTAYGAYL 541
Query: 788 GYYNSIREIGRDKTTLVELANKF-AQSIGLQRPPPLFRKTALKMGLKDIPGIRLR 841
G ++ RDK +V N+ A + GL+ PP A K+G K +PG+ R
Sbjct: 542 GVMSNT----RDKFEVVRYINQLSAHAWGLKEPPFFSASLAHKIGYKGVPGLNTR 592
>gi|261200939|ref|XP_002626870.1| DEAD box RNA helicase HelA [Ajellomyces dermatitidis SLH14081]
gi|239593942|gb|EEQ76523.1| DEAD box RNA helicase HelA [Ajellomyces dermatitidis SLH14081]
Length = 699
Score = 262 bits (670), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 196/535 (36%), Positives = 268/535 (50%), Gaps = 70/535 (13%)
Query: 369 KREEEPILSQKRFDECG----ISPLTIKALTAAGYIQ-MTRVQEATLSACLEGKDAVVKA 423
K EE +F E IS I+ +T I MT VQ T++A L G D + +A
Sbjct: 66 KEAEEAPCELTQFSELASNGLISDNVIRVITNQMNITTMTDVQRMTINATLNGSDVLAQA 125
Query: 424 KTGTGKSIAFLLPAIEAVLKATS-------SSTTQLVPPIYVLILCPTRELASQIAAEAI 476
KTGTGK++AFLLP ++ +LK S I +I+ PTRELA QIA EA
Sbjct: 126 KTGTGKTLAFLLPVVQNILKDQQLAQRPRFSHNQTDASDIRAIIISPTRELAEQIAVEAK 185
Query: 477 ALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIEN-KSGLSVRLMGL 535
++ N I V T VGGTR + R++ D C ILV TPGRL+D + SG+S L
Sbjct: 186 KIVSN-TSIIVQTAVGGTRKREGLMRIQRDGCHILVGTPGRLIDIFSDPNSGVSAP--KL 242
Query: 536 KMLVLDEADHLLDLGFRKDVENIVDCLPRRR----QSLLFSATMPKELV------LKREH 585
LVLDEAD LLD+GF D++ + LPRRR Q+L+FSAT+P+E++ +KR+
Sbjct: 243 SALVLDEADRLLDIGFAPDIQELQTYLPRRREVDRQTLMFSATVPREVMSMVRQTMKRDF 302
Query: 586 TYIDTVGLGSVETPVKIKQSCLVA-PHELHFQILHHLLKEHIL---GTPD----YKVIVF 637
T++ TV T + + Q +V E + L K+ I PD +K IV+
Sbjct: 303 TFVKTVQEDETPTHLAVPQKHVVLRGMENQLPAILELAKQGIEKHEQDPDNNMPFKAIVY 362
Query: 638 CSTGMVTSLLYLLLREMKMNVR-------------EMYSRKPQLYRDRISEEFRASKRLI 684
++ +L M+ N EM+SR Q R R S FR SK I
Sbjct: 363 FNSTAEVTLAKQAFAAMRSNTSTHSSHPLPDTPSYEMHSRLSQEQRTRFSTMFRKSKSAI 422
Query: 685 LVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLAPWE----- 739
L +SDV+ARGMD+PDVT V+Q+GIP DRE YIHRLGRT R K+GEG L E
Sbjct: 423 LFSSDVTARGMDFPDVTHVIQMGIPRDRETYIHRLGRTARANKKGEGWLFTLDLEIGNLR 482
Query: 740 ------------EYFLDDLKDLPLDKLQLPHLNPEIQLQMDNHMAKIDNNVKEAAYHAWL 787
L D+ D PH++ +I ++ + + K AY A+L
Sbjct: 483 RTLGGLPIQSDSHSLLTATADMSTDIGHPPHVS-DIFSKVKDGFRMVPMKDKSTAYGAYL 541
Query: 788 GYYNSIREIGRDKTTLVELANKF-AQSIGLQRPPPLFRKTALKMGLKDIPGIRLR 841
G ++ RDK +V N+ A + GL+ PP A K+G K +PG+ R
Sbjct: 542 GVMSNT----RDKFEVVRYINQLSAHAWGLKEPPFFSASLAHKIGYKGVPGLNTR 592
>gi|406864540|gb|EKD17585.1| DEAD/DEAH box helicase [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 628
Score = 262 bits (670), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 175/476 (36%), Positives = 260/476 (54%), Gaps = 33/476 (6%)
Query: 386 ISPLTIKALTA-AGYIQMTRVQEATLSACLEGK-DAVVKAKTGTGKSIAFLLPAIEAVLK 443
+ P+ ++ +T + M VQ ATL L + D + +AKTGTGK+IAFLLPAI+ ++
Sbjct: 88 LHPILLQTITQDLKFDHMMPVQAATLHELLANRIDCLAQAKTGTGKTIAFLLPAIQTLIN 147
Query: 444 ATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRL 503
+ I +L++ PTRELA QIA EA ALLK V +GGT +++ +
Sbjct: 148 KNRKPGSG----ISLLVISPTRELAMQIAKEATALLKRLPQYKVSFAIGGTNKTTEEKSI 203
Query: 504 ESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLP 563
C IL+ATPGRL DH+ ++ + L LVLDEAD LLD+GF D++ I+ CLP
Sbjct: 204 LRG-CDILIATPGRLYDHLSDERIVDA-FSNLDTLVLDEADRLLDMGFMNDLKKIIQCLP 261
Query: 564 ----RRRQSLLFSATMP------KELVLKREHTYIDTVGLGSVETPVKIKQSCLVAP--H 611
+RQ +LFSAT+ LVL +++ +I T+ G V T ++ Q +V P
Sbjct: 262 DKAATQRQGMLFSATIAPHVEKVAHLVLSKDYKFISTIPEGDVNTHERVPQELIVVPAFS 321
Query: 612 ELHFQILHHLLKEHILGTPD-YKVIVFCSTGMVTSLLYLLLREMK--MNVREMYSRKPQL 668
++ ++ L E L P+ +K IVF T + +L+ + V ++SR Q
Sbjct: 322 DVAAALVGSLRAEIKLSGPETFKGIVFAPTAALVDFYGEILQNLSDMPEVSVLHSRVSQS 381
Query: 669 YRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKE 728
R +++ FR +K ILV +DV ARGMD+P VT+V+QVG+P D+E YIHRLGRT R G E
Sbjct: 382 KRTSVTDAFRGAKNGILVATDVVARGMDFPLVTNVIQVGVPSDKESYIHRLGRTARAGAE 441
Query: 729 GEGVLLLAPWEEYFLD-DLKDLPLDKLQLPHLNPEIQLQMDNHMAKIDNNVKEAAYHAWL 787
G G ++ E +F +LKD+ + H ++ + + Y AW+
Sbjct: 442 GRGTFIITEAETFFSKWNLKDITFN-----HSPADLTSKSEVLSIAEKRESHSKTYQAWM 496
Query: 788 GYY-NSIREIGRDKTTLVELANKFAQSIGLQRP--PPLFRKTALKMGLKDIPGIRL 840
GYY N I+ + D LV AN+FA+ G+ P P + + T KMGLK + G+ +
Sbjct: 497 GYYKNHIKGLKWDNEELVRQANQFARD-GMGSPDVPGVAKSTIGKMGLKGVKGLNI 551
>gi|219128317|ref|XP_002184362.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217404163|gb|EEC44111.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 474
Score = 261 bits (666), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 171/481 (35%), Positives = 265/481 (55%), Gaps = 46/481 (9%)
Query: 398 GYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLVPPIY 457
G+ +MT +Q T A GKD + +A+TG+GK++AFLLPA+E +L+ ++ + +
Sbjct: 2 GFDRMTEIQAKTFDAASLGKDVLGRARTGSGKTVAFLLPALERLLQDNNNKSNK--KSTR 59
Query: 458 VLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILVATPGR 517
+L+L PTRELA QIA + L + + +VGGT D ++ I++ATPGR
Sbjct: 60 MLVLSPTRELAQQIAEQTRLLTAHMPNMSHQVMVGGTPKPKDVSAMKRKVPTIIIATPGR 119
Query: 518 LLDHIE----NKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQSLLFSA 573
L DH+E + + L +LVLDE D LLD+GFR++++ I+ LPR +Q+LLFSA
Sbjct: 120 LQDHLESTVVHNTPFKDLFRELDVLVLDETDRLLDMGFRREIDKIIKYLPRNKQTLLFSA 179
Query: 574 TMPKEL------VLKREHTYIDTV----GLGSVETPVKIKQSCLVAPHELHFQ-----IL 618
T+P+++ ++ + +D + S T ++ Q+ ++ P I+
Sbjct: 180 TIPEDVKHVIRQTMRDPYITVDCIHDDQAESSSHTNAQVSQAHVILPTNTRMASGTVDII 239
Query: 619 HHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKM--NVREMYSRKPQLYRDRISEE 676
++L++ P K++ F T + + LLR++ + E++SRK Q R++ SE
Sbjct: 240 RNILEKQ----PHSKIVAFFPTANLVAFYASLLRDVLEIPRILEIHSRKSQSQREKASES 295
Query: 677 FRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLA 736
FR + L+TSDVSARG+DYPDVT V+Q G+ RE YIHRLGRTGR GK G+G+L+L
Sbjct: 296 FRKTNHGCLLTSDVSARGVDYPDVTHVLQFGVADSRESYIHRLGRTGRAGKLGQGILVLT 355
Query: 737 PWEEYFLDDLK--DLPLD-KLQLPHLNPEIQLQMDNHMAKIDNNVKEA-----------A 782
E FL LK D+P+ +LQ P ++ Q D +A + ++ A
Sbjct: 356 DVERGFLRHLKGLDIPVHPELQAIVDGPTVESQQD--LAPVWASIGSGRNADLALKATKA 413
Query: 783 YHAWLGYYNS---IREIGRDKTTLVELANKFAQSIGLQRPPPLFRKTALKMGLKDIPGIR 839
Y + LG+YN+ R + LV N FA +G PP+ +KT KMGLK I G+
Sbjct: 414 YVSALGFYNTHLKARCGVKGTDALVAFCNAFAYQVGFTTLPPIEKKTIGKMGLKGIQGLN 473
Query: 840 L 840
+
Sbjct: 474 V 474
>gi|452981044|gb|EME80804.1| hypothetical protein MYCFIDRAFT_189200 [Pseudocercospora fijiensis
CIRAD86]
Length = 506
Score = 260 bits (664), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 172/478 (35%), Positives = 264/478 (55%), Gaps = 42/478 (8%)
Query: 391 IKALTAAGYIQMTRVQEATLSACLE-GKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSST 449
+ + + GY MT VQ+ L+ + D +V+AKTGTGK++AFLLPAI ++L S +T
Sbjct: 26 LAGIQSMGYGFMTPVQQKVLTELPDFSADCLVQAKTGTGKTLAFLLPAIHSLLTKASIAT 85
Query: 450 TQLVPPIYVLILCPTRELASQIAAEAIAL-------LKNHDGIGVLTLVGGTRFKVDQRR 502
Q + +L+L PTRELA QIA E A+ L+ H T GGT + D +
Sbjct: 86 GQ----VAILVLSPTRELALQIAKECNAVTAKLPRRLECH------TAYGGTSKERDLKA 135
Query: 503 -LESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDC 561
L DP +I+VATPGRL D++ N ++ + L+ LVLDEAD +L+ GF + +I+
Sbjct: 136 FLNGDP-KIVVATPGRLNDYL-NDDYVAEKFADLRTLVLDEADQMLEQGFLVALNDILRR 193
Query: 562 LPRRR----QSLLFSATMPKEL------VLKREHTYIDTVGLGSVETPVKIKQSCLVAP- 610
LP++ Q + FSATMPK++ VL + H ++ T+ T K+ Q ++ P
Sbjct: 194 LPQKSKANWQGMCFSATMPKKIEGVLPKVLNKGHIHLTTIDPDETPTIDKVTQHSIIVPS 253
Query: 611 -HELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREM-----KMNVREMYSR 664
E++ + L E+ + D+K IVF +T +L+Y L + + V ++ SR
Sbjct: 254 NQEVYPALWDLLQTEYSSCSGDFKAIVFGTTANGVALMYALFSALLEGSNTLQVFQLQSR 313
Query: 665 KPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGR 724
Q R R + EF+A+K I+ SDV RGMD+P+V+ VVQ+G+P +QY+HR+GRT R
Sbjct: 314 LSQANRTRTTNEFKAAKAGIMFASDVIGRGMDFPNVSHVVQIGLPSSGDQYVHRVGRTAR 373
Query: 725 EGKEGEGVLLLAPWEEYFLDDLKDLPLDKL--QLPHLNPEIQ-LQMDNHMAKIDNNVKEA 781
G EG +++L E +FL K LP+ L E Q ++ K+D K
Sbjct: 374 AGNEGRAIIILTQRESFFLKVNKRLPITPYPTALASATGETQNSDIEAAFTKVDETTKSK 433
Query: 782 AYHAWLGYYNSI-REIGRDKTTLVELANKFAQSIGLQRPPPLFRKTALKMGLKDIPGI 838
AY AWLG++ + +++ TLV+ AN +A ++G P + +K KMGLK + G+
Sbjct: 434 AYQAWLGFHKTFTKQLQLTNDTLVQEANDYAAAMGCPETPMIDKKIVGKMGLKGVKGL 491
>gi|425770619|gb|EKV09087.1| hypothetical protein PDIP_65980 [Penicillium digitatum Pd1]
gi|425771925|gb|EKV10353.1| hypothetical protein PDIG_56420 [Penicillium digitatum PHI26]
Length = 556
Score = 259 bits (663), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 173/479 (36%), Positives = 267/479 (55%), Gaps = 46/479 (9%)
Query: 391 IKALTAAGYIQMTRVQEATLSACLEGK-DAVVKAKTGTGKSIAFLLPAIEAVLKATSSST 449
+KAL G+ MT VQ+ L+ + D +V+AKTGTGK++AFLLPA+ +L+ S+
Sbjct: 25 LKALDVMGFTHMTPVQQRVLTELPNWRSDCLVQAKTGTGKTLAFLLPALHCLLQGDSA-- 82
Query: 450 TQLVPP---IYVLILCPTRELASQIAAEAIAL-------LKNHDGIGVLTLVGGTRFKVD 499
PP + +LI+ PTRELA QIA L L+ H +G G R
Sbjct: 83 ----PPKGKVGILIITPTRELAQQIAKACDELTSQLPTPLECHVAVG-----GTARASAH 133
Query: 500 QRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIV 559
R ++ P ILVATPGRL D++ +++ + +L ++ LVLDEAD +L+ GF DV+ I+
Sbjct: 134 SRFMKGAP-SILVATPGRLCDYL-SQTPTAKKLSNIQTLVLDEADTMLESGFIADVKRIL 191
Query: 560 DCLPRRR---QSLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSCLVAP 610
+P++ Q + FSAT+P + +VLKR++T I T+ T ++ Q ++ P
Sbjct: 192 QLIPQKSTGWQGMCFSATVPPKVKDVVNIVLKRDYTSISTIEKNEAPTHERVPQYHVLMP 251
Query: 611 HEL-HFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLRE--MKMNVREMYSRKPQ 667
F L LLK I K+IVF T + +LL + + + + V E++SR Q
Sbjct: 252 SVADTFTTLASLLKHEI--KKSSKIIVFGVTAHMVALLAGVFCKGMVHLKVFEIHSRLNQ 309
Query: 668 LYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGK 727
R R +++F+ ++ IL SDV RGMD+P+V V+QVG+P + EQY+HR+GRT R G
Sbjct: 310 GARTRTTDQFKEAEAGILFASDVIGRGMDFPNVDLVIQVGLPSNGEQYVHRVGRTARAGA 369
Query: 728 EGEGVLLLAPWEEYFLDDLKDLPL----DKLQLPHLNPEIQLQMDNHMAKIDNNVKEAAY 783
+G ++LL E +F+ + + LP+ D + P + M ID K+ AY
Sbjct: 370 DGRAIILLTEGESFFMKNNRHLPIKPHPDTEAINAGAPSCSKAVLQAMYTIDEESKQRAY 429
Query: 784 HAWLGYYNS---IREIGRDKTTLVELANKFA-QSIGLQRPPPLFRKTALKMGLKDIPGI 838
+++G++ +R++ DK LV+LAN+ A + +G PPP+ RK KMGLK +PG
Sbjct: 430 SSFIGFFAGSGLLRQLRLDKAGLVQLANEMAVKGMGCPEPPPMDRKVIGKMGLKGVPGF 488
>gi|452000171|gb|EMD92633.1| hypothetical protein COCHEDRAFT_1135427 [Cochliobolus
heterostrophus C5]
Length = 557
Score = 259 bits (662), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 177/478 (37%), Positives = 258/478 (53%), Gaps = 33/478 (6%)
Query: 386 ISPLTIKALTAAGYIQMTRVQEATLSACLE-GKDAVVKAKTGTGKSIAFLLPAIEAVLKA 444
+ P + L G+ M+ VQ+ L+ D VV+AKTGTGK++AFLLPAI+ +L
Sbjct: 86 LHPGLLDGLDKMGFQYMSPVQQKVLTELPSLSSDCVVQAKTGTGKTVAFLLPAIQNLLAG 145
Query: 445 TSSSTTQLVPP---IYVLILCPTRELASQIAAEA---IALLKNHDGIGVLTLVGGTRFKV 498
+PP + +L++CPTRELA QIA E A L + T GGT
Sbjct: 146 N-------MPPRGKVAILVICPTRELALQIAKECNGVTACLPQR--MECHTAFGGTSRAS 196
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
+ + S ILVATPGRL D I + + + LK +VLDEAD +LD GF V+ I
Sbjct: 197 NLKAFMSGNPTILVATPGRL-DDILGEEEVRDKFSHLKTVVLDEADQMLDAGFAPAVKKI 255
Query: 559 VDCLPRRR---QSLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSCLVA 609
+ +P + Q + FSAT+PKE +VL +T++ TV V T ++ Q +
Sbjct: 256 LRRIPPKNDGWQGMCFSATLPKEVLDIAKIVLFPGYTHLSTVDPNEVPTHERVPQFYITV 315
Query: 610 PHELH-FQILHHLLKEHILGTP-DYKVIVFCSTGMVTSLLYLLLREMKMNVR--EMYSRK 665
P F L L++E P D+K IVF +T LLY L R R E++SR
Sbjct: 316 PTVGQTFPALSALIEEEYNQNPTDFKAIVFGTTANGVGLLYDLYRNALPQFRLFELHSRM 375
Query: 666 PQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGRE 725
Q R + ++EF+ + IL SDV RGMD+P+V V+QVG+P EQY+HR+GRT R
Sbjct: 376 SQPARTKTTKEFKEASSGILFASDVVGRGMDFPNVGLVIQVGLPSSTEQYVHRVGRTARA 435
Query: 726 GKEGEGVLLLAPWEEYFLDDLKDLPLDKLQLPHLN--PEIQLQMDNHMAKIDNNVKEAAY 783
GK+G V++L E +F K LP+ + ++ Q+Q++ +D K AY
Sbjct: 436 GKDGRAVIILFEQESFFPRVNKTLPIQAYPVDIVSRLAAHQVQIERAFVDVDEVSKAKAY 495
Query: 784 HAWLGYYNS-IREIGRDKTTLVELANKFAQSIGLQRPPPLFRKTALKMGLKDIPGIRL 840
A+LGY + ++++ LV+LAN++A ++G PP L + T KMGLK +PG+R+
Sbjct: 496 QAFLGYNKTFVKKLQLSTAELVKLANEYAYTMGCPEPPMLEKSTVGKMGLKGVPGLRI 553
>gi|452842885|gb|EME44821.1| hypothetical protein DOTSEDRAFT_24801 [Dothistroma septosporum
NZE10]
Length = 736
Score = 259 bits (661), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 176/471 (37%), Positives = 267/471 (56%), Gaps = 27/471 (5%)
Query: 391 IKALTAAGYIQMTRVQEATLSACLEGK-DAVVKAKTGTGKSIAFLLPAIEAVLKATSSST 449
+++L A GY M+ VQ+ LS + D +V+AKTGTGK+IAFLLPA+++VL +
Sbjct: 24 LQSLDAMGYQHMSPVQQKVLSELPTFQSDCLVQAKTGTGKTIAFLLPALQSVLSQAPLAR 83
Query: 450 TQLVPPIYVLILCPTRELASQIAAEAIALL-KNHDGIGVLTLVGGTRFKVDQRRLESDPC 508
Q + +L++ PTRELA QIA E ++ K + T GGT D +R +
Sbjct: 84 GQ----VAILVVSPTRELALQIAKECESVTAKLPRRLECHTAYGGTSRDRDLKRFNNGDP 139
Query: 509 QILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRR-- 566
+I+VATPGRL D + + + R ++ L+LDEAD +L+ GF + +I+ LP +
Sbjct: 140 KIVVATPGRLNDLLGEEE-VRQRFQSVRTLILDEADQMLEAGFLVAINDILRRLPPKSNG 198
Query: 567 -QSLLFSATMPKEL------VLKREHTYIDTVGLGSVETPVKIKQSCLVAPH-ELHFQIL 618
Q + FSATMPK++ VLK +T + T+ T K+ Q +V P F L
Sbjct: 199 WQGMCFSATMPKKIDGVLPKVLKAGYTRLSTISADEEPTIDKVPQHYVVVPSVRDTFTTL 258
Query: 619 HHLL-KEHILGTPDYKVIVFCSTGMVTSLLYLLLREM----KMNVREMYSRKPQLYRDRI 673
LL +E+ L ++KVIVF +T +L++ + E+ +M V ++ SR Q R R
Sbjct: 259 RVLLQREYELQPQNFKVIVFGATANGVALMHAIFSEIFAGTQMQVFQLQSRLSQNARTRT 318
Query: 674 SEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVL 733
+ EF+ + I+ SDV RGMD+P+V+ VVQVGIP EQY+HR+GRT R G EG V+
Sbjct: 319 TNEFKEAPAGIMFASDVIGRGMDFPNVSLVVQVGIPSSGEQYVHRVGRTARAGNEGRAVI 378
Query: 734 LLAPWEEYFLDDLKDLPLDKLQLPHLNPE-IQLQMDNHMA--KIDNNVKEAAYHAWLGYY 790
LL E +FL K+LP+ +L+P Q D MA +ID K AY AWLG++
Sbjct: 379 LLTQRESFFLKVNKNLPITPYP-ENLSPSAAQHSQDVEMAFNQIDEATKAKAYQAWLGFH 437
Query: 791 NSI-REIGRDKTTLVELANKFAQSIGLQRPPPLFRKTALKMGLKDIPGIRL 840
+ +++ + L+E AN++A ++G PP + ++ KMGLK + G+ +
Sbjct: 438 KTFTKQLQLNNEGLIEQANEYAATMGCPEPPMIDKRVVGKMGLKGVRGLNV 488
>gi|189190346|ref|XP_001931512.1| ATP-dependent RNA helicase MSS116, mitochondrial precursor
[Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187973118|gb|EDU40617.1| ATP-dependent RNA helicase MSS116, mitochondrial precursor
[Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 554
Score = 258 bits (658), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 178/482 (36%), Positives = 255/482 (52%), Gaps = 51/482 (10%)
Query: 391 IKALTAAGYIQMTRVQEATLSACLE-GKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSST 449
+ L G+ M+ VQ+ L+ D VV+AKTGTGK++AFLLPAI+ +L
Sbjct: 87 LDGLDKMGFEFMSPVQQQVLTQLPSLSSDCVVQAKTGTGKTVAFLLPAIQNLLAGN---- 142
Query: 450 TQLVPP---IYVLILCPTRELASQIAAEAIAL-------LKNHDGIGVLTLVGGTRFKVD 499
+PP + +L++CPTRELA QI+ E L ++ H G G +R
Sbjct: 143 ---MPPKGKVAILVICPTRELALQISKECNGLTTCLPQKMECHTAFG-----GTSRASNL 194
Query: 500 QRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIV 559
++ +P +LVATPGRL D I + + + LK +VLDEAD +LD GF V+ I+
Sbjct: 195 NAFMKGNPT-VLVATPGRL-DDILGEEEVRDKFSHLKTVVLDEADQMLDAGFAPAVKKIL 252
Query: 560 DCLPRRR---QSLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSCLVAP 610
+P + Q + FSAT+PKE +VL T++ TV V T ++ Q P
Sbjct: 253 RRIPPKNDGWQGMCFSATLPKEVLDIAKIVLFPGFTHLSTVDPNEVPTHERVPQFSFSVP 312
Query: 611 HELH-FQILHHLLKEHILGTP-DYKVIVFCSTGMVTSLLYLLLREMKMNVR--EMYSRKP 666
F L L++E +P D+K IVF +T LLY L R R E++SR
Sbjct: 313 TVGQTFPALSALIEEEYNQSPTDFKAIVFGTTANGVGLLYDLYRHALPQFRLFELHSRMS 372
Query: 667 QLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREG 726
Q R R +++F+ + IL SDV RGMD+P+V V+QVG+P +QY+HR+GRT R G
Sbjct: 373 QPARTRTTKDFKEASSGILFASDVVGRGMDFPNVGLVIQVGLPSSTDQYVHRVGRTARAG 432
Query: 727 KEGEGVLLLAPWEEYFLDDLKDLPLDKLQL-------PHLNPEIQLQMDNHMAKIDNNVK 779
K+G VLLL E +F K LP+ + PH Q +D A +D K
Sbjct: 433 KDGRAVLLLFQQESFFPRINKTLPIKPYTVDIVSRLAPH-----QATIDRAFANVDEASK 487
Query: 780 EAAYHAWLGYYNS-IREIGRDKTTLVELANKFAQSIGLQRPPPLFRKTALKMGLKDIPGI 838
AY A+LGY + ++++ LV LAN +A+S+G PP L + T KMGLK +PG+
Sbjct: 488 SKAYQAFLGYNKTFVKKLQISTADLVRLANDYARSMGCPEPPMLEKSTVGKMGLKGVPGL 547
Query: 839 RL 840
R+
Sbjct: 548 RI 549
>gi|255941752|ref|XP_002561645.1| Pc16g13460 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211586268|emb|CAP94016.1| Pc16g13460 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 539
Score = 257 bits (656), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 172/479 (35%), Positives = 265/479 (55%), Gaps = 46/479 (9%)
Query: 391 IKALTAAGYIQMTRVQEATLSACLEGK-DAVVKAKTGTGKSIAFLLPAIEAVLKATSSST 449
+KAL G+ MT VQ+ L+ + D +V+AKTGTGK++AFLLPA+ +L+ S+
Sbjct: 10 LKALDVMGFTNMTPVQQRVLTELPNWRSDCLVQAKTGTGKTLAFLLPALHCLLQGDSA-- 67
Query: 450 TQLVPP---IYVLILCPTRELASQIAAEAIAL-------LKNHDGIGVLTLVGGTRFKVD 499
PP + +LI+ PTRELA QIA L L+ H +G G R
Sbjct: 68 ----PPKGKVGILIITPTRELAQQIAKACDELTSQLPTPLECHVAVG-----GTARASAH 118
Query: 500 QRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIV 559
R ++ P ILVATPGRL D++ +++ + +L ++ LVLDEAD +L+ GF DV+ I+
Sbjct: 119 SRFMKGAP-SILVATPGRLCDYL-SETPTAKKLSNIQTLVLDEADTMLESGFIADVKRIL 176
Query: 560 DCLPRRR---QSLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSCLVAP 610
+P++ Q + FSAT+P + +VLK+ +T I T+ T ++ Q ++ P
Sbjct: 177 QLIPQKSTGWQGMCFSATVPPKVKDVVNIVLKKNYTSISTIDENEAPTHERVPQYHVLMP 236
Query: 611 HEL-HFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLRE--MKMNVREMYSRKPQ 667
F L LLK I K+IVF T + SLL + + + + V E++SR Q
Sbjct: 237 SVADTFTTLASLLKHEI--KTSSKIIVFGVTAHMVSLLAGVFCKGMVHLKVFEIHSRLNQ 294
Query: 668 LYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGK 727
R R + +F+ ++ IL SDV RGMD+P+V V+QVG+P + EQY+HR+GRT R G
Sbjct: 295 GARTRTTNQFKEAEAGILFASDVIGRGMDFPNVDLVIQVGLPSNGEQYVHRVGRTARAGA 354
Query: 728 EGEGVLLLAPWEEYFLDDLKDLPL----DKLQLPHLNPEIQLQMDNHMAKIDNNVKEAAY 783
+G ++LL E +F+ + + LP+ D + P + M ID K+ AY
Sbjct: 355 DGRAIILLTEGESFFMKNNRHLPIKPHPDTEAINAGAPSCSKAVMQAMYTIDEESKQRAY 414
Query: 784 HAWLGYYNS---IREIGRDKTTLVELANKFA-QSIGLQRPPPLFRKTALKMGLKDIPGI 838
+++G++ +R++ DK LV+LAN+ A + +G PPP+ +K KMGLK +PG
Sbjct: 415 SSFIGFFAGSGLLRQLRLDKAGLVQLANEMAVKGMGCPEPPPMDKKIIGKMGLKGVPGF 473
>gi|342865119|gb|EGU71680.1| hypothetical protein FOXB_17809 [Fusarium oxysporum Fo5176]
Length = 608
Score = 256 bits (654), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 173/487 (35%), Positives = 268/487 (55%), Gaps = 36/487 (7%)
Query: 377 SQKRFDEC----GISPLTIKALTAAGYIQ-MTRVQEATLSACLEGK--DAVVKAKTGTGK 429
+ +RFD ++PL ++ +T + MT VQ AT+ L D +V+A+TGTGK
Sbjct: 105 TSRRFDSLLENNKVNPLIVRTITNDMKFEFMTPVQAATMDELLPPNRSDCLVQARTGTGK 164
Query: 430 SIAFLLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLT 489
++AFL+PA++ ++ ++ I +L++ PTRELA QI+AEA +L+ V
Sbjct: 165 TMAFLIPALQTMINQNRAAGDG----ISLLVISPTRELALQISAEAKKVLQGLPKYRVQV 220
Query: 490 LVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDL 549
+GGT ++R + + C+IL+ATPGRLLDH+ N+ + + L LVLDEAD LLD+
Sbjct: 221 AIGGTNKDREERAILAG-CEILIATPGRLLDHMSNED-IVYSMRKLNTLVLDEADRLLDM 278
Query: 550 GFRKDVENIVDCLPRR----RQSLLFSATMPKE------LVLKREHTYIDTVGLGSVETP 599
GF KD+ +IV LP + RQ +LFSAT+ LVL + +I T+ G T
Sbjct: 279 GFMKDLRDIVGRLPDKTKSDRQGMLFSATIAPHVEQVAGLVLSPGYKFISTIPAGEANTH 338
Query: 600 VKIKQSCLVAPHELHFQ-ILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK--M 656
++ Q + P + ++E +K I+F T + LL ++
Sbjct: 339 ERVPQFLVQVPTFADVAPAMVGCIREEATRGQAFKAILFAPTAAIADFYGRLLEDLPGLP 398
Query: 657 NVREMYSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYI 716
V ++SR Q R +I+ ++R ++ ILV +DV ARGMD+P VT+V+QVG+P D++ YI
Sbjct: 399 PVSILHSRMSQNKRTKITNDYRTARSAILVATDVVARGMDFPGVTTVIQVGMPADKQSYI 458
Query: 717 HRLGRTGREGKEGEGVLLLAPWEEYFLDDLKDLPLDKLQLPHLNPEIQLQMD--NHMAKI 774
HRLGRT R EG G+L++ E +F L ++ L ++ D K+
Sbjct: 459 HRLGRTARADAEGRGILIVCDAEGFF----PKYSLKEINLIAREADLSPSRDVIEVAEKM 514
Query: 775 DNNVKEAAYHAWLGYYNS-IREIGRDKTTLVELANKFAQSIGLQRP--PPLFRKTALKMG 831
+++ K Y AWLGYYNS ++ + DK LV AN +A+ GL P P + + TA KMG
Sbjct: 515 EDDEKSRVYQAWLGYYNSHMKSLRWDKEELVRQANVYARE-GLGSPDVPTIQKSTASKMG 573
Query: 832 LKDIPGI 838
L+ + G+
Sbjct: 574 LRGVRGL 580
>gi|225681866|gb|EEH20150.1| ATP-dependent RNA helicase mss116 [Paracoccidioides brasiliensis
Pb03]
Length = 773
Score = 256 bits (653), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 180/497 (36%), Positives = 261/497 (52%), Gaps = 63/497 (12%)
Query: 402 MTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLK-------ATSSSTTQLVP 454
MT VQ T++A L G D + +AKTGTGK++AFL+P ++ +LK A ++ +
Sbjct: 103 MTEVQRMTINATLNGSDVLAQAKTGTGKTLAFLIPVVQNILKDEQLSQRARNNRSRSNAS 162
Query: 455 PIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILVAT 514
I LI+ PTRELA QIA EA L+ N I V T VGGTR + R++ + C ILV T
Sbjct: 163 DIRALIISPTRELAEQIAVEAKKLVSNTSVI-VQTAVGGTRKREGLMRIQREGCHILVGT 221
Query: 515 PGRLLDHIEN-KSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRR----RQSL 569
PGRL+D + KSG++ L LVLDEAD LLD+GF D++ + LPRR RQ+L
Sbjct: 222 PGRLIDIFSDPKSGVAA--PKLSALVLDEADRLLDIGFAPDIKELQSYLPRRQDVDRQTL 279
Query: 570 LFSATMPKELV------LKREHTYIDTVGLGSVETPVKIKQSCL-VAPHELHFQILHHLL 622
+FSAT+P E++ +K + T++ TV T + + Q + + E + L
Sbjct: 280 MFSATVPTEVMDMVRQTMKPDFTFVKTVKEDETPTHLTVPQKLVYLRGMENQLPAIFELA 339
Query: 623 KEHI---LGTPD----YKVIVFCSTGMVTSLLYLLLREMKMNVR-------------EMY 662
K++I PD +K IV+ ++ L M+ ++ EM+
Sbjct: 340 KKYIEKHKNDPDNVKPFKAIVYFNSTAEVGLARQAFSAMRYDLSSNSGHPLPDFQCFEMH 399
Query: 663 SRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRT 722
SR Q R R S FR + +L +SDV+ARGMD+PDVT V+Q+G+P DRE YIHRLGRT
Sbjct: 400 SRLSQEQRTRSSGLFRQASSAMLFSSDVTARGMDFPDVTHVIQIGVPRDRETYIHRLGRT 459
Query: 723 GREGKEGEG-VLLLAPWEEYFLDDLKDLPLDKLQLPHLNPEIQLQMDN----HMAKIDNN 777
GR K+GEG + L ++ L LP+ L + ++ H++ I +
Sbjct: 460 GRANKKGEGWIFSLKLESDHIRRQLYGLPIQSDSSSLLTASADMTTEDGHPPHVSDIFSK 519
Query: 778 VKEA-----------AYHAWLGYYNSIREIGRDKTTLVELANKFA-QSIGLQRPPPLFRK 825
VK+ AY A+LG I RDK +V N+ + GL+ PP
Sbjct: 520 VKDGFKAVPIKQKNQAYAAYLGTMAQI----RDKYAVVHYINQLSTHGWGLKDPPTYSSA 575
Query: 826 TALKMGLKDIPGIRLRK 842
+A K+G +IPG+ +K
Sbjct: 576 SAAKLGYINIPGLNEKK 592
>gi|330932689|ref|XP_003303874.1| hypothetical protein PTT_16258 [Pyrenophora teres f. teres 0-1]
gi|311319861|gb|EFQ88046.1| hypothetical protein PTT_16258 [Pyrenophora teres f. teres 0-1]
Length = 509
Score = 255 bits (652), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 178/482 (36%), Positives = 253/482 (52%), Gaps = 51/482 (10%)
Query: 391 IKALTAAGYIQMTRVQEATLSACLE-GKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSST 449
+ L G+ M+ VQ+ L+ D VV+AKTGTGK++AFLLPAI+ +L
Sbjct: 42 LDGLDKMGFEFMSPVQQQVLTQLPSLSSDCVVQAKTGTGKTVAFLLPAIQNLLAGN---- 97
Query: 450 TQLVPP---IYVLILCPTRELASQIAAEAIAL-------LKNHDGIGVLTLVGGTRFKVD 499
+PP + +L++CPTRELA QI+ E L ++ H G G +R
Sbjct: 98 ---MPPKGKVAILVICPTRELALQISKECNGLTACLPQKMECHTAFG-----GTSRASNL 149
Query: 500 QRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIV 559
+ +P +LVATPGRL D I + + + LK +VLDEAD +LD GF V+ I+
Sbjct: 150 NAFMRGNPT-VLVATPGRL-DDILGEEEVREKFSHLKTVVLDEADQMLDAGFAPAVKKIL 207
Query: 560 DCLPRRR---QSLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSCLVAP 610
+P + Q + FSAT+PKE +VL T++ TV V T ++ Q P
Sbjct: 208 RRIPPKNDGWQGMCFSATLPKEVLDIAKIVLFPGFTHLSTVDPNEVPTHERVPQFSFSVP 267
Query: 611 HELH-FQILHHLLKEHILGTP-DYKVIVFCSTGMVTSLLYLLLREMKMNVR--EMYSRKP 666
F L L++E P D+K IVF +T LLY L R R E++SR
Sbjct: 268 TVGQTFPALSALIEEEYNQNPTDFKAIVFGTTANGVGLLYDLYRHALPQFRLFELHSRMS 327
Query: 667 QLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREG 726
Q R R +++F+ + IL SDV RGMD+P+V V+QVG+P +QY+HR+GRT R G
Sbjct: 328 QPARTRTTKDFKEASSGILFASDVVGRGMDFPNVGLVIQVGLPSSTDQYVHRVGRTARAG 387
Query: 727 KEGEGVLLLAPWEEYFLDDLKDLPLDKLQL-------PHLNPEIQLQMDNHMAKIDNNVK 779
K+G VLLL E +F K LP+ + PH Q +D A +D K
Sbjct: 388 KDGRAVLLLFEQESFFPRINKTLPIKPYTIDIVSRLAPH-----QATIDRAFANVDEVSK 442
Query: 780 EAAYHAWLGYYNS-IREIGRDKTTLVELANKFAQSIGLQRPPPLFRKTALKMGLKDIPGI 838
AY A+LGY + ++++ LV LAN +A+S+G PP L + T KMGLK +PG+
Sbjct: 443 SKAYQAFLGYNKTFVKKLQISTADLVRLANDYARSMGCPEPPMLEKSTVGKMGLKGVPGL 502
Query: 839 RL 840
R+
Sbjct: 503 RI 504
>gi|396494359|ref|XP_003844285.1| hypothetical protein LEMA_P019360.1 [Leptosphaeria maculans JN3]
gi|312220865|emb|CBY00806.1| hypothetical protein LEMA_P019360.1 [Leptosphaeria maculans JN3]
Length = 624
Score = 254 bits (649), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 171/472 (36%), Positives = 255/472 (54%), Gaps = 31/472 (6%)
Query: 391 IKALTAAGYIQMTRVQEATLSACLE-GKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSST 449
+ L G+ M+ VQ+ L+ D VV+AKTGTGK++AFLLPAI+ +L
Sbjct: 157 LDGLDKMGFQYMSPVQQKVLTELPSLSSDCVVQAKTGTGKTVAFLLPAIQNLLAGN---- 212
Query: 450 TQLVPP---IYVLILCPTRELASQIAAE--AIALLKNHDGIGVLTLVGGTRFKVDQRRLE 504
+PP + +LI+CPTRELA QIA E + H + T GGTR R
Sbjct: 213 ---MPPRGKVAILIVCPTRELALQIAKEVNGVTACLPHK-MECHTAFGGTRRVSSLRAFL 268
Query: 505 SDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPR 564
++ +LVATPGRL D I + + + LK +VLDEAD +LD GF V I+ +P
Sbjct: 269 NNNPTVLVATPGRL-DDILGEESVREKFTHLKTVVLDEADQMLDAGFAPAVRKILKRIPP 327
Query: 565 RR---QSLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSCLVAPH-ELH 614
+ Q + FSAT+P+E +VL T++ TV T ++ Q ++ P
Sbjct: 328 KSDGWQGMCFSATLPEEVLSIAKIVLFPGFTHLSTVDPYEALTHERVIQFSVIIPTINQT 387
Query: 615 FQILHHLLKEHILGTP-DYKVIVFCSTGMVTSLLYLLLREMKMNVR--EMYSRKPQLYRD 671
F L L++E P D+K IVF +T LLY L R R E++SR Q R
Sbjct: 388 FAALSALIEEEYNQDPTDFKAIVFGTTANGVGLLYDLFRHALPQFRSFELHSRMSQPART 447
Query: 672 RISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEG 731
R ++EF+ ++ IL SDV RGMD+P+V V+Q+G+P QY+HR+GRT R GK+G
Sbjct: 448 RTTKEFKEARSGILFASDVVGRGMDFPNVGLVIQLGLPTSTNQYVHRVGRTARAGKDGRA 507
Query: 732 VLLLAPWEEYFLDDLKDLPLDKLQLPHLN--PEIQLQMDNHMAKIDNNVKEAAYHAWLGY 789
V++L E +F K LP+ + ++ P+ + ++ +D K AY A+LGY
Sbjct: 508 VIILYEQESFFPRISKTLPIKPYPVDIVSRLPKHEAEITRAFTNVDETAKSKAYQAFLGY 567
Query: 790 YNS-IREIGRDKTTLVELANKFAQSIGLQRPPPLFRKTALKMGLKDIPGIRL 840
+ ++++ LV LAN++A+++G PP + + T KMGLK +PG+R+
Sbjct: 568 NKTFLKKLELTSVQLVRLANEYARTMGCPEPPMIEKSTIGKMGLKGVPGLRI 619
>gi|323449473|gb|EGB05361.1| hypothetical protein AURANDRAFT_31097 [Aureococcus anophagefferens]
Length = 479
Score = 254 bits (648), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 178/466 (38%), Positives = 243/466 (52%), Gaps = 36/466 (7%)
Query: 402 MTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLVPPIYVLIL 461
MT +QE +G D V +A+TGTGK++AFL+P+++ +L+ + P V++L
Sbjct: 1 MTPIQELAFGPASDGDDIVARAQTGTGKTLAFLVPSLKRLLEGDLLDREKRRP--RVVVL 58
Query: 462 CPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDH 521
PTRELA QI A+A L +VGGT D R+L++ +LVATPGRL D
Sbjct: 59 SPTRELAQQIHAQAERLAAGTPAK-CCCVVGGTSKGADVRKLKAG-VDVLVATPGRLCDL 116
Query: 522 IENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQSLLFSATMPKEL-- 579
+ L L G + LVLDE D LLD GF + + IV R RQ+L FSATMP +L
Sbjct: 117 LGGDERL---LRGAQTLVLDEGDRLLDEGFERQLTQIVAASSRSRQTLCFSATMPADLDR 173
Query: 580 -----VLKREHTYIDTVGLGSV---ETPVKIKQSCLVAPHEL-HFQILHHLLKEHILGTP 630
+KR+H +D GLGS T ++ S L P L + L H G
Sbjct: 174 MLRSGAVKRDHARLDAAGLGSTVADATAARVALSRLSLPRGADALGSLANALNAHRGGKG 233
Query: 631 DYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEFR----ASKRLILV 686
KV+VFC T L L ++ ++SRK Q YR R+S FR +S ILV
Sbjct: 234 GSKVVVFCPTTASAELAAAYLHRRGLDNAALHSRKTQSYRTRVSNAFRDADASSAHAILV 293
Query: 687 TSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLAPWEE-YFLDD 745
+DV+ARG+DYP V+ VVQ+G P REQ++HR GRTGR G GE +L+L WE+ + L
Sbjct: 294 ATDVAARGVDYPGVSLVVQLGAPDSREQFVHRAGRTGRAGASGEALLVLEHWEQGHALGM 353
Query: 746 LKDLPLDKLQLPHLNPEIQLQMDN-------HMAKIDNNVKEAAYHAWLGYYNS-IREIG 797
L D+P L +P L + M I +V++ AY AWLG+ N+ + +G
Sbjct: 354 LGDVP----GLGDADPAAVLPAGDDAAASVAAMKAIARDVRDKAYVAWLGHTNAKAKALG 409
Query: 798 RDKTTLVELANKFA-QSIGLQRPPPLFRKTALKMGLKDIPGIRLRK 842
K LV+ AN A L P L + MGLK + IR+ K
Sbjct: 410 WSKQELVDRANAMAVDDYKLVDIPALTPRAVGFMGLKQVRNIRVEK 455
>gi|156061783|ref|XP_001596814.1| hypothetical protein SS1G_03037 [Sclerotinia sclerotiorum 1980]
gi|154700438|gb|EDO00177.1| hypothetical protein SS1G_03037 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 688
Score = 253 bits (647), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 182/508 (35%), Positives = 270/508 (53%), Gaps = 53/508 (10%)
Query: 380 RFDECG----ISPLTIKALTAAGYIQ-MTRVQEATLSACLEGKDAVVKAKTGTGKSIAFL 434
RFDE + P + +T ++ MT VQ T++ L+G D + +A+TGTGK+I FL
Sbjct: 77 RFDELTKYGLVHPNVVNEITDTMKLETMTEVQTMTINQALQGTDIIAQARTGTGKTIGFL 136
Query: 435 LPAIEAVLK-----ATSSSTTQLVPP-IYVLILCPTRELASQIAAEAIALLKNHDGIGVL 488
LP I+ +L+ AT ++ P I +I+ PTRELA QIA EA+ + +N D I V
Sbjct: 137 LPTIQNILEKSPELATRQRYSRARPSDIRAIIISPTRELAEQIAVEAVKITRNTDLI-VQ 195
Query: 489 TLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLD 548
VGG+ + R+++ + C ILV TPGRL D + ++ V GL LVLDEAD LLD
Sbjct: 196 VAVGGSSKREMLRKVQREGCHILVGTPGRLQDLLMDEYS-QVSAPGLTTLVLDEADRLLD 254
Query: 549 LGFRKDVENIVDCLPRR----RQSLLFSATMPKELV------LKREHTYIDTVGLGSVET 598
GF KD+ENI LP R RQ+LLFSAT+P+E++ LK + ++ TV G V T
Sbjct: 255 DGFSKDIENIEALLPNRKEVDRQTLLFSATVPREVMRLVKRTLKPGYQFVQTVKEGDVAT 314
Query: 599 PVKIKQSCLVAPHELHFQI--LHHLLKEHIL-----GTPDYKVIVFCSTGMVTSLLYLLL 651
+I Q + A L I L L K+ I GT +K IV+ ++ L +
Sbjct: 315 HERIPQK-IAATVGLENTIPALVELCKKGIEKANTEGTSPFKAIVYFNSTASVQLAGEIF 373
Query: 652 REM----KMNVREMYSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVG 707
+ + + ++ + Q R R+++ FR ++ I+ +SDV+ARGMD+P+VT V+QV
Sbjct: 374 KGIDSLHSVETSAIHGKLSQERRTRVTDRFRRAQSAIMFSSDVTARGMDFPNVTHVIQVS 433
Query: 708 IPPDREQYIHRLGRTGREGKEGEGVLLLA----PWEEYFLDDLKDLPLDKL--------- 754
+P DR+ YIHR+GRTGR GKEGEG L++ P L L P L
Sbjct: 434 VPRDRDTYIHRVGRTGRGGKEGEGWLIMTQAEIPVARRLLSALPITPDRTLATALVDMKK 493
Query: 755 --QLPHLNPEIQLQMDNHMAKIDNNVKEAAYHAWLGYYNSIREIGRDKTTLVELANKFAQ 812
QLP EI ++ ++D VK AY A +G R ++ ++ L +
Sbjct: 494 DAQLPAATAEILNEVGQATKRVDREVKVDAYMAAIG---GGRAGQNNRELMMSLNDMVKY 550
Query: 813 SIGLQRPPPLFRKTALKMGLKDIPGIRL 840
G ++PP + A K+G+ +PG+ +
Sbjct: 551 GWGWEKPPLISPGMAQKLGVAKLPGMNI 578
>gi|310794753|gb|EFQ30214.1| DEAD/DEAH box helicase [Glomerella graminicola M1.001]
Length = 577
Score = 253 bits (647), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 178/484 (36%), Positives = 260/484 (53%), Gaps = 36/484 (7%)
Query: 380 RF-DECGISPLTIKALTA-AGYIQMTRVQEATLSACLEGK--DAVVKAKTGTGKSIAFLL 435
RF D G++P I+A+T + M VQ ATL+ L K D +V+AKTGTGK+IAFLL
Sbjct: 60 RFADMVGVNPALIQAITQDLKFDHMMPVQAATLTELLPPKRGDCLVQAKTGTGKTIAFLL 119
Query: 436 PAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTR 495
PAI+ ++ I +L++ PTRELA QIA EA ALL+ V +GGT
Sbjct: 120 PAIQTLITNNRGRGAG----ISLLVISPTRELAMQIAKEAQALLQRLQQYRVCIAIGGTN 175
Query: 496 FKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDV 555
+++++ + C IL+ATPGRL+DH+ N+ + L LVLDEAD LLD+GF +
Sbjct: 176 KDREEKQILNG-CDILIATPGRLIDHLSNEY-IKESFRHLDTLVLDEADRLLDMGFMPAL 233
Query: 556 ENIVDCLPRR----RQSLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQS 605
++IV LP + RQ +LFSAT+ LVL + + +I T+ G T ++ Q
Sbjct: 234 KDIVRALPDKAQTNRQGMLFSATIAPHVEQVAGLVLSKGYKFISTIPAGEANTHERVPQH 293
Query: 606 CLVAPHELHFQILHHLLKEHI------LGTPDYKVIVFCSTGMVTSLLYLLLREMKM--N 657
+ P F + + I +G +K I+F T + +L +
Sbjct: 294 LIKVPT---FAAVAPAMVGAIREEAAHVGPETFKAIIFAPTAALADFYGDVLANVPGMPP 350
Query: 658 VREMYSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 717
++SR Q R + + ++R SK I+V +DV ARGMD+P VTSV QVGIP D+E YIH
Sbjct: 351 TAVLHSRISQSKRTKTTNDYRDSKSGIIVATDVIARGMDFPGVTSVFQVGIPADKESYIH 410
Query: 718 RLGRTGREGKEGEGVLLLAPWEEYFLD-DLKDLPLDKLQLPHLNPEIQLQMDNHMAKIDN 776
RLGRT R G EG G+ ++A E +F LK++ + + + E ++ +ID
Sbjct: 411 RLGRTARAGAEGRGIFIVAEIEGFFPQWTLKEISFETRRADLSSAEQVYEIAEQ--RIDE 468
Query: 777 NVKEAAYHAWLGYY-NSIREIGRDKTTLVELANKFAQ-SIGLQRPPPLFRKTALKMGLKD 834
K Y AWLGYY N ++ + DK LV N FA+ ++ P + + T KMGL+
Sbjct: 469 AQKAKIYQAWLGYYKNWMKSLKWDKEQLVAEGNIFARDALAAPETPAIQKSTIGKMGLRG 528
Query: 835 IPGI 838
G+
Sbjct: 529 TRGL 532
>gi|116198757|ref|XP_001225190.1| hypothetical protein CHGG_07534 [Chaetomium globosum CBS 148.51]
gi|88178813|gb|EAQ86281.1| hypothetical protein CHGG_07534 [Chaetomium globosum CBS 148.51]
Length = 1481
Score = 253 bits (645), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 173/479 (36%), Positives = 253/479 (52%), Gaps = 34/479 (7%)
Query: 386 ISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKAT 445
+ P +KAL G+ MT VQE L +D +V+AKTGTGK++AFLLPA++ +L A
Sbjct: 883 LQPQLLKALENHGFTHMTPVQEQVLQLPYFTQDCLVQAKTGTGKTLAFLLPALQNLLSAE 942
Query: 446 SSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDG-IGVLTLVGGTRFKVDQRRLE 504
+ + +L+L PTRELA QI E L D + VGG++ K +
Sbjct: 943 DLDRSS----VGLLVLAPTRELAQQINDECDKLTSACDPPLECHIAVGGSKRKTHMDKFL 998
Query: 505 SDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPR 564
ILVATPGRL+D++ + +L ++ +VLDEAD +LD GF + I+ +P
Sbjct: 999 KGKPTILVATPGRLIDYLSEDAARQ-KLTKIRCVVLDEADRMLDAGFAPALRQILQQIPP 1057
Query: 565 RRQS----LLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELH 614
+ Q+ + FSAT+P E +VL + H + T+ T + Q+ V P +
Sbjct: 1058 KAQANWQGMCFSATVPPEIQKMLPMVLAKNHVRLSTIDENEAPTVETVPQT--VYPVDSV 1115
Query: 615 FQIL---HHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREM------KMNVREMYSRK 665
IL H +L P K I+FC T +LLY + K+ V +M SR
Sbjct: 1116 DDILPTVHSVLACARADNPSLKAIIFCPTARHAALLYHVFGHTGGAAPPKLPVFQMQSRM 1175
Query: 666 PQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGRE 725
Q R R EEF+ + R +L SDV RGMD+PD+ VVQ+G+P ++EQY+HR+GRTGR
Sbjct: 1176 SQPQRTRTVEEFKETDRGLLFASDVVGRGMDFPDINLVVQIGVPSEKEQYVHRVGRTGRA 1235
Query: 726 GKEGEGVLLLAPWEEYFLDDLKDLPLDKLQLPHLNPEIQLQ-----MDNHMAKIDNNVKE 780
GK GE V++ AP E +F+ P+ K P +P+ + +AK+ KE
Sbjct: 1236 GKVGEAVMITAPEEMWFIRANPAFPI-KNNGPFNHPKASTYPSAEIIRAALAKVPLQAKE 1294
Query: 781 AAYHAWLGYYNSI-REIGRDKTTLVELANKFAQSIGLQRPPPLFRKTALKMGLKDIPGI 838
AY LG+ S+ R + +VELAN+FA + G + P L +T KMGL+ +PG+
Sbjct: 1295 QAYVGNLGFIKSLMRRYSLEADGVVELANRFATAFGCEEIPYLTPQTVGKMGLRGVPGL 1353
>gi|226289033|gb|EEH44545.1| ATP-dependent RNA helicase mss116 [Paracoccidioides brasiliensis
Pb18]
Length = 689
Score = 252 bits (644), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 178/496 (35%), Positives = 258/496 (52%), Gaps = 61/496 (12%)
Query: 402 MTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLK-------ATSSSTTQLVP 454
MT VQ T++A L G D + +AKTGTGK++AFL+P ++ +LK A ++ +
Sbjct: 103 MTEVQRMTINATLNGSDVLAQAKTGTGKTLAFLIPVVQNILKDVQLSQRARNNRSRSNAS 162
Query: 455 PIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILVAT 514
I LI+ PTRELA QIA EA L+ N I V T VGGTR + R++ + C ILV T
Sbjct: 163 DIRALIISPTRELAEQIAVEAKKLVSNTSVI-VQTAVGGTRKREGLMRIQREGCHILVGT 221
Query: 515 PGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRR----RQSLL 570
PGRL+D I + V L LVLDEAD LLD+GF D++ + LPRR RQ+L+
Sbjct: 222 PGRLID-IFSDPNSGVAAPKLSALVLDEADRLLDIGFAPDIKELQSYLPRRQDVDRQTLM 280
Query: 571 FSATMPKELV------LKREHTYIDTVGLGSVETPVKIKQSCL-VAPHELHFQILHHLLK 623
FSAT+P+E++ +K + T++ TV T + + Q + + E + L K
Sbjct: 281 FSATVPREVMDMVRQTMKPDFTFVKTVKEDETPTHLTVPQKLVYLRGMENQLPAIFELAK 340
Query: 624 EHI---LGTPD----YKVIVFCSTGMVTSLLYLLLREMKMNVR-------------EMYS 663
++I PD +K IV+ ++ L M+ ++ EM+S
Sbjct: 341 KYIEKHKNDPDNVKPFKAIVYFNSTAEVGLARQAFSAMRYDLSSNSGHPLPDFQCFEMHS 400
Query: 664 RKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTG 723
R Q R R S FR + +L +SDV+ARGMD+PDVT V+Q+G+P DRE YIHRLGRT
Sbjct: 401 RLSQEQRTRSSGLFRQASSAMLFSSDVTARGMDFPDVTHVIQIGVPRDRETYIHRLGRTA 460
Query: 724 REGKEGEG-VLLLAPWEEYFLDDLKDLPLDKLQLPHLNPEIQLQMDN----HMAKIDNNV 778
R K+GEG + L ++ L LP+ L + ++ H++ I + V
Sbjct: 461 RANKKGEGWIFSLKLESDHIRRQLYGLPIQSDSSSLLTASADMTTEDGHPPHVSDIFSKV 520
Query: 779 KEA-----------AYHAWLGYYNSIREIGRDKTTLVELANKFA-QSIGLQRPPPLFRKT 826
K+ AY A+LG I RDK +V N+ + GL+ PP +
Sbjct: 521 KDGFKAVPIKQKNQAYAAYLGTMAQI----RDKYAVVHYINQLSTHGWGLKDPPTFSSAS 576
Query: 827 ALKMGLKDIPGIRLRK 842
A K+G +IPG+ +K
Sbjct: 577 AAKLGYINIPGLNDKK 592
>gi|302838316|ref|XP_002950716.1| hypothetical protein VOLCADRAFT_81215 [Volvox carteri f.
nagariensis]
gi|300263833|gb|EFJ48031.1| hypothetical protein VOLCADRAFT_81215 [Volvox carteri f.
nagariensis]
Length = 533
Score = 252 bits (643), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 157/399 (39%), Positives = 223/399 (55%), Gaps = 36/399 (9%)
Query: 478 LLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHI-ENKSGLSVRLMGLK 536
+L H + + + GG K R ++ IL+ATPGR D + ++ L L +
Sbjct: 1 MLTFHPELHSMVVYGGVDVKKHLRAIKGRMPDILIATPGRCWDIMTQSHPALRTLLDSTR 60
Query: 537 MLVLDEADHLLDLGFRKDVENIVDCLP--RRRQSLLFSATMPKEL------VLKREHTYI 588
+LVLDEAD+LLD+GFR + I+ LP +RQ+ LFSAT P ++ LKR+H Y+
Sbjct: 61 VLVLDEADNLLDMGFRPQISKILGSLPPTSQRQTFLFSATFPADVKSLADVALKRQHRYV 120
Query: 589 DTVGLGSVETPVKIKQSCLVAP---HELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTS 645
D VG V T ++ S LV P EL Q+L L+ HI PDYK+IVF T +T+
Sbjct: 121 DAVG-EDVATHTHVEASSLVVPLQGGELALQLLG-LIAAHIAQEPDYKIIVFLPTAHLTA 178
Query: 646 LLYLLLREMKMN-VREMYSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVV 704
L ++ V E++SRK Q RDR S +FR+ RL++ +SDVSARG+DYP+VT V+
Sbjct: 179 FYARLFESAGLSGVLEIHSRKSQAQRDRASAQFRSESRLVMFSSDVSARGVDYPNVTYVI 238
Query: 705 QVGIPPDREQYIHRLGRTGREGKEGEGVLLLAPWEEYFLDDLKDLPLD------------ 752
Q+G P +REQYIHR GRTGR G+ G+ LLLA +E+ FLD L+DLP+
Sbjct: 239 QLGAPSNREQYIHRAGRTGRAGRPGQCTLLLADFEQRFLDRLRDLPITPLRPLQLPLPSQ 298
Query: 753 -------KLQLP-HLNPEIQLQMDNHMAKIDNNVKEAAYHAWLGYYNSIREIGRDKTTLV 804
+ LP L + + + +D + AY ++LGYY S + +V
Sbjct: 299 QQRRQQQQQALPAALARDPAGTLARALGGLDAEARGRAYQSFLGYYKSHEVLKFRSEQVV 358
Query: 805 ELANKF-AQSIGLQRPPPLFRKTALKMGLKDIPGIRLRK 842
LAN++ A+ +G PP L KT KMGLK +PG+ + K
Sbjct: 359 ALANQYAAEVLGCPTPPGLLAKTVGKMGLKGVPGLVIVK 397
>gi|322704901|gb|EFY96491.1| ATP-dependent RNA helicase MSS116 [Metarhizium anisopliae ARSEF 23]
Length = 561
Score = 251 bits (642), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 175/483 (36%), Positives = 257/483 (53%), Gaps = 36/483 (7%)
Query: 381 FDECGISPLTIKALTA-AGYIQMTRVQEATLSACLEGK--DAVVKAKTGTGKSIAFLLPA 437
DE + P +A+T + M VQ ATL L D +V+AKTGTGK++AFLLPA
Sbjct: 78 LDEQHLHPSLTEAITKDLKFDHMMPVQAATLWELLPPSRHDCLVQAKTGTGKTVAFLLPA 137
Query: 438 IEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFK 497
++ ++ + I +L++ PTRELA QIA EA +LL+ V T +GGT
Sbjct: 138 LQNMITKKKPGGSA----ISLLVISPTRELALQIAQEATSLLQRLPDYRVRTAIGGTNKD 193
Query: 498 VDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVEN 557
+++++ D C +L+ATPGRL+DH+ N++ L L LVLDEAD LLD+GF +
Sbjct: 194 REEKQI-LDRCDVLIATPGRLIDHMSNENILWA-FRELDTLVLDEADRLLDMGFVPALRE 251
Query: 558 IVDCLPRR----RQSLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSCL 607
I+ LP + RQS+LFSAT+ + LVL + +I T+ G T ++ Q +
Sbjct: 252 IISKLPDKKQVDRQSMLFSATIAERVNKVAGLVLSTGYKFISTIPEGEANTHERVPQVLI 311
Query: 608 VAPHELHFQI-LHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK--MNVREMYSR 664
P + ++E ++K IVF T +L + V ++SR
Sbjct: 312 TVPTFASVTAGMVGAIREEAAKHDNFKAIVFAPTAAQAGFYGHVLSRIPGLPPVSTLHSR 371
Query: 665 KPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGR 724
Q R +I+ ++R + IL +DV ARGMD+P VT+V Q+GIP ++E YIHRLGRT R
Sbjct: 372 MTQNKRTKITNDYREAPSAILTATDVIARGMDFPGVTTVFQIGIPSEKESYIHRLGRTAR 431
Query: 725 EGKEGEGVLLLAPWEEYFLD-DLKDLPLDKLQLPHLNPEIQL----QMDNHMAKIDNNVK 779
EG G+ L+ E +F LK+ +PH E L +++ M ID + K
Sbjct: 432 ANAEGRGIFLICEAESFFPKWTLKNFTF----IPH---EADLSSADEVEQIMDTIDEDQK 484
Query: 780 EAAYHAWLGYYNS-IREIGRDKTTLVELANKFAQ-SIGLQRPPPLFRKTALKMGLKDIPG 837
Y AWLGYYN+ ++ + DKT LV AN FA +G PP+ + KMGL+ G
Sbjct: 485 AQIYQAWLGYYNNHMKGLRWDKTELVRQANIFAHDGLGTPETPPIQKGVVGKMGLRGTRG 544
Query: 838 IRL 840
+ +
Sbjct: 545 LNV 547
>gi|169612383|ref|XP_001799609.1| hypothetical protein SNOG_09314 [Phaeosphaeria nodorum SN15]
gi|118585849|sp|Q0UG00.1|MS116_PHANO RecName: Full=ATP-dependent RNA helicase MSS116, mitochondrial;
Flags: Precursor
gi|111062386|gb|EAT83506.1| hypothetical protein SNOG_09314 [Phaeosphaeria nodorum SN15]
Length = 550
Score = 251 bits (641), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 179/506 (35%), Positives = 264/506 (52%), Gaps = 51/506 (10%)
Query: 362 GNGEKKEKREEEPILSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLE-GKDAV 420
GN K E +L + D L G+ M+ VQ+ L+ D V
Sbjct: 64 GNASAKPFSELSSVLDKSLLD----------GLDKMGFEFMSPVQQKVLTELPSLSSDCV 113
Query: 421 VKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLVPP---IYVLILCPTRELASQIAAEAIA 477
V+AKTGTGK++AFLLPAI+ +L +PP + +L++CPTRELA QIA E
Sbjct: 114 VQAKTGTGKTVAFLLPAIQNLLAGN-------MPPRGKVAILVVCPTRELALQIAKECNG 166
Query: 478 L-------LKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSV 530
+ ++ H G G +R + L +P ILVATPGRL D I + +
Sbjct: 167 VTACLPRKMECHTAFG-----GTSRASNLKAFLNGNPT-ILVATPGRL-DDILGEEHVRE 219
Query: 531 RLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRR---QSLLFSATMPKE------LVL 581
R LK +VLDEAD +LD GF V+ I+ +P + Q + FSAT+PKE +VL
Sbjct: 220 RFTHLKTVVLDEADQMLDAGFAPAVKKILRRIPPKSDGWQGMCFSATLPKEVLDIAKIVL 279
Query: 582 KREHTYIDTVGLGSVETPVKIKQSCLVAPHELH-FQILHHLLKE-HILGTPDYKVIVFCS 639
T++ TV V T ++ Q L P+ F L L++E H D+K IVF +
Sbjct: 280 FPGFTHLTTVDPNEVPTHERVPQYFLSVPNVGQTFAALSALIQEEHKQDPTDFKAIVFGT 339
Query: 640 TGMVTSLLYLLLREM--KMNVREMYSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDY 697
T LLY L + + V E++SR Q R R + +F+ + IL SDV RGMD+
Sbjct: 340 TANGVGLLYDLYKHALPQFRVFELHSRMSQPMRTRTTAQFKEATSGILFASDVVGRGMDF 399
Query: 698 PDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLAPWEEYFLDDLKDLPLD--KLQ 755
P+V VVQ+G+P EQY+HR+GRT R GK+G VL+L E +F + LP+ +
Sbjct: 400 PNVGLVVQLGLPSSTEQYVHRVGRTARAGKDGRAVLVLFEKEAFFPRINRTLPIKPYPVD 459
Query: 756 LPHLNPEIQLQMDNHMAKIDNNVKEAAYHAWLGYYNS-IREIGRDKTTLVELANKFAQSI 814
+ PE + + A ++ K AY A+LGY + ++++ T LV +AN++++++
Sbjct: 460 IAAKVPEQEAAITRAFANVEEEAKAKAYQAFLGYNKTFLKKLQLSTTELVRVANEYSRAM 519
Query: 815 GLQRPPPLFRKTALKMGLKDIPGIRL 840
G PP + + T KMGLK +PG+ +
Sbjct: 520 GCPEPPLIEKSTIGKMGLKGVPGLNI 545
>gi|322701930|gb|EFY93678.1| ATP-dependent RNA helicase MSS116 precursor [Metarhizium acridum
CQMa 102]
Length = 560
Score = 251 bits (640), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 182/517 (35%), Positives = 270/517 (52%), Gaps = 45/517 (8%)
Query: 356 SKNKLNGNGEKKEKREEEPILSQK------RFDECG---ISPLTIKALTA-AGYIQMTRV 405
+ + +NGN + +P L++ RF E + P +A+T + M V
Sbjct: 43 TPSPINGNETPPLPFDAKPPLTEAVPLDTPRFSELDKQRLHPSLTEAITKDLKFDHMMPV 102
Query: 406 QEATLSACLEGK--DAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLVPPIYVLILCP 463
Q ATL L D +V+AKTGTGK+IAFLLPA++ ++ + I +L++ P
Sbjct: 103 QAATLWELLPPHRHDCLVQAKTGTGKTIAFLLPALQNMITKKQPGGSA----ISLLVISP 158
Query: 464 TRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIE 523
TRELA QIA EA +LL+ V T +GGT +++++ D C +L+ATPGRL+DH+
Sbjct: 159 TRELALQIAQEATSLLQRLPDYRVRTAIGGTNKDREEKQI-LDRCDVLIATPGRLIDHMS 217
Query: 524 NKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRR----RQSLLFSATMPKE- 578
N++ L L LVLDEAD LLD+GF + IV LP + RQS+LFSAT+ +
Sbjct: 218 NENILWA-FRDLDTLVLDEADRLLDMGFLPALREIVSKLPDKKQADRQSMLFSATIAERV 276
Query: 579 -----LVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQI-LHHLLKEHILGTPDY 632
LVL + +I T+ G T + Q + P + ++E ++
Sbjct: 277 NKIAGLVLSPGYKFISTIPEGEANTHEHVPQVLITVPTFASVTAGMVGAIREEAANHDNF 336
Query: 633 KVIVFCSTGMVTSLLYLLLREMK--MNVREMYSRKPQLYRDRISEEFRASKRLILVTSDV 690
K IVF T +L + V ++SR Q R +I+ ++R + IL +DV
Sbjct: 337 KAIVFAPTAAQAGFYGHVLSMIPGLPPVSTLHSRMTQNKRTKITNDYREAPSAILAATDV 396
Query: 691 SARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLAPWEEYFLD-DLKDL 749
ARGMD+P VT+V Q+GIP ++E YIHRLGRT R EG G+ L+ E +F LK+
Sbjct: 397 IARGMDFPGVTTVFQIGIPSEKESYIHRLGRTARANAEGRGIFLICEAESFFPRWTLKNF 456
Query: 750 PLDKLQLPHLNPEIQLQMDNHMAK----IDNNVKEAAYHAWLGYYNS-IREIGRDKTTLV 804
+PH E + + +A+ ID + K Y AWLGYYN+ ++ + DKT LV
Sbjct: 457 TF----IPH---EADISSADEVAQILDTIDEDEKAQIYKAWLGYYNNHMKGLRWDKTELV 509
Query: 805 ELANKFAQ-SIGLQRPPPLFRKTALKMGLKDIPGIRL 840
AN FA+ +G PP+ + KMGL+ G+ +
Sbjct: 510 RQANIFARDGLGTPETPPIQKSVVGKMGLRGTRGLNV 546
>gi|451854256|gb|EMD67549.1| hypothetical protein COCSADRAFT_82392 [Cochliobolus sativus ND90Pr]
Length = 508
Score = 250 bits (639), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 175/483 (36%), Positives = 257/483 (53%), Gaps = 43/483 (8%)
Query: 386 ISPLTIKALTAAGYIQMTRVQEATLSACLE-GKDAVVKAKTGTGKSIAFLLPAIEAVLKA 444
+ P + L G+ M+ VQ+ L+ D VV+AKTGTGK++AFLLPAI+ +L
Sbjct: 37 LHPGLLDGLDKMGFQYMSPVQQKVLTELPSLSSDCVVQAKTGTGKTVAFLLPAIQNLLAG 96
Query: 445 TSSSTTQLVPP---IYVLILCPTRELASQIAAEA---IALLKNHDGIGVLTLVGGTRFKV 498
+PP + +L++CPTRELA QIA E A L + T GGT
Sbjct: 97 N-------MPPRGKVAILVICPTRELALQIAKECNGVTACLPQK--MECHTAFGGTSRAS 147
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
+ + + +LVATPGRL D I + + + LK +VLDEAD +LD GF V+ I
Sbjct: 148 NLKAFMNGNPTVLVATPGRL-DDILGEEEVRDKFSHLKTVVLDEADQMLDAGFAPAVKKI 206
Query: 559 VDCLPRRR---QSLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSCLVA 609
+ +P + Q + FSAT+PKE +VL +T++ TV V T ++ Q +
Sbjct: 207 LRRIPPKNDGWQGMCFSATLPKEVLDIAKIVLFPGYTHLSTVDPNEVPTHERVPQFYITV 266
Query: 610 PHELH-FQILHHLLKE-HILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVR--EMYSRK 665
P F L L++E H D+K IVF +T LLY L R R E++SR
Sbjct: 267 PTVGQTFPALSALIEEEHNQNPTDFKAIVFGTTANGVGLLYDLYRNALPQFRLFELHSRM 326
Query: 666 PQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGRE 725
Q R + +++F+ + IL SDV RGMD+P+V V+QVG+P EQY+HR+GRT R
Sbjct: 327 SQPARTKTTKDFKEASSGILFASDVVGRGMDFPNVGLVIQVGLPSSTEQYVHRVGRTARA 386
Query: 726 GKEGEGVLLLAPWEEYFLDDLKDLPLDKLQLPHLNPEIQLQMDNHMAKIDNNV------- 778
GK+G V++L E +F K LP+ + +I ++ H KI+
Sbjct: 387 GKDGRAVIILFEQESFFPRVNKTLPIQPYPV-----DIVSRLAAHQPKIERAFVDVEEVS 441
Query: 779 KEAAYHAWLGYYNS-IREIGRDKTTLVELANKFAQSIGLQRPPPLFRKTALKMGLKDIPG 837
K AY A+LGY + ++++ LV+LAN++A ++G PP L + T KMGLK +PG
Sbjct: 442 KSKAYQAFLGYNKTFVKKLQLSTAELVKLANEYAYTMGCPEPPMLEKSTVGKMGLKGVPG 501
Query: 838 IRL 840
+R+
Sbjct: 502 LRI 504
>gi|409047111|gb|EKM56590.1| hypothetical protein PHACADRAFT_27393 [Phanerochaete carnosa
HHB-10118-sp]
Length = 689
Score = 249 bits (636), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 171/483 (35%), Positives = 250/483 (51%), Gaps = 63/483 (13%)
Query: 415 EGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLV--------------------- 453
E +D +VKA+TGTGK++AFL+PA+EA +KA ++ Q V
Sbjct: 122 EARDLLVKARTGTGKTLAFLIPAVEARMKALDAAGKQAVIDAGLKNDHHIEMRAQRALSR 181
Query: 454 PPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILVA 513
LI+ PTRELA+QIA EA+ L H+G V VGGT ++ R I+VA
Sbjct: 182 ETAGTLIISPTRELATQIANEALRLTTRHEGFEVRLFVGGTSKRMQMRDWMRGRRDIVVA 241
Query: 514 TPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPR--RRQSLLF 571
TPGR+ D +EN+ ++ + KML+LDEAD LL++GFR+D++ I + + RQ+ LF
Sbjct: 242 TPGRMRDLLENEPEVAKGMKDCKMLILDEADTLLEMGFREDIQAITSYIAKTPERQTFLF 301
Query: 572 SATMPKEL------VLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHF--QILHHLLK 623
SAT+ +E+ L R H +ID V + S + Q V P H IL L
Sbjct: 302 SATVSREIQQIARATLDRNHRFIDCVPVDSSPVHAHVPQYHTVLPTAAHQIPHILRLLAH 361
Query: 624 EHILGTPDYKVIVFCSTGMVTSLLYLLLREMK---------MNVREMYSRKPQLYRDRIS 674
+ +L K I+F T +T L +RE+ + E++S++ R + S
Sbjct: 362 DQLLHPGKSKTIIFLPTTKLTQLFSTFIRELSSMCLPAGRNTRIYEIHSKRTMESRSKTS 421
Query: 675 EEFRASK-RLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGR-EGKEGEGV 732
++FR K +L++SDVSARG+DYP VT V+QVGIP +QY+HR+GRTGR K G
Sbjct: 422 QQFRMDKGNSVLISSDVSARGVDYPGVTRVIQVGIPSSTDQYVHRVGRTGRGRDKVGRAD 481
Query: 733 LLLAPWEEYFLD-DLKDLPLDKLQLPHL-----------NPEIQLQMDNH-------MAK 773
L+L PWE F+ L D+PL + + L NP+ + +D+ MAK
Sbjct: 482 LVLLPWEIGFVTWQLTDIPLRPVTVTELTSQVKQLCEEQNPDAAVVIDDMDAEVKRLMAK 541
Query: 774 IDNNVKEAAYHAWLGYY-NSIREIGRDKTTLVE-LANKFAQSIGLQRPPPLFRKTALKMG 831
+D + + LGYY E+ KT +VE L ++ GL PP + K+G
Sbjct: 542 LDPEAIKETLASVLGYYVGKSGELRVQKTVIVEGLKQWTVEACGLSSPPYISDSFLEKLG 601
Query: 832 LKD 834
+ D
Sbjct: 602 MSD 604
>gi|452983029|gb|EME82787.1| hypothetical protein MYCFIDRAFT_211157 [Pseudocercospora fijiensis
CIRAD86]
Length = 656
Score = 249 bits (635), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 188/502 (37%), Positives = 263/502 (52%), Gaps = 65/502 (12%)
Query: 398 GYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLK-----ATSSSTTQL 452
G MT VQ T++ L+G+D + +AKTGTGK++AFLLP ++ +++ A S +
Sbjct: 93 GLDTMTEVQAKTINEALKGQDVIAQAKTGTGKTLAFLLPILQRIIEVDPQLANGSGYGRR 152
Query: 453 VP-----PIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDP 507
P I L++ PTRELA QIAAEA L +N G+ V T VGGT+ R ++ D
Sbjct: 153 GPRTTADDIRALVISPTRELAEQIAAEAKKLTRN-TGVIVQTAVGGTQKSAGLRAIQRDG 211
Query: 508 CQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRR-- 565
C +L+ATPGRL D + + V L LV DEAD LLD GF D++ I+ LP R
Sbjct: 212 CHVLIATPGRLKDLLTDPYS-RVEAPDLSALVFDEADRLLDQGFWPDIQEIMRLLPTRAE 270
Query: 566 --RQSLLFSATMPKELV------LKREHTYIDTVGLGSVETPVKIKQ-SCLVAPHELHFQ 616
RQ+L+FSAT+P+E+V LK ++ V T +I Q S L+ E
Sbjct: 271 KDRQTLMFSATVPREVVSIVRQTLKPGFNFVKCVRDDEEPTHARIPQRSVLLQGLENCVP 330
Query: 617 ILHHLLKEHI-----LGTPDYKVIVFCSTGMVT----SLLYLLLREMK------------ 655
L L + I G P ++ F ST VT +LL L + +
Sbjct: 331 SLVELCQRAIDDSKTTGKPFKAIVYFNSTAEVTLAASALLSLQGAQQQDSFGGYGAHPWH 390
Query: 656 -MNVREMYSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQ 714
+ E++++ Q R R S+EFR + IL++SDV+ARGMD+P+VT V+QVG+P REQ
Sbjct: 391 PTKILEIHAKLSQSGRTRASDEFRRATSAILLSSDVTARGMDFPNVTHVIQVGLPTSREQ 450
Query: 715 YIHRLGRTGREGKEGEGVLLLAPWEE-YFLDDLKDLPL---DKLQLPHLN-------PEI 763
YIHR+GRTGR GKEGEG + L P E D L+DLPL D L +P ++ P
Sbjct: 451 YIHRIGRTGRAGKEGEGWIFLNPIEAGEARDRLRDLPLTKDDTLLIPKMDLTQASDVPAS 510
Query: 764 QLQMDNHMAKIDNNV----KEAAYHAWLGYYNSIREIGRDKTTLVELANKFAQ-SIGLQR 818
++ K NV K Y A LG YN K +V+L N+ ++ GL
Sbjct: 511 AGRVLAMYQKAIKNVPTGEKAKVYLAQLGVYNWFSR----KQQVVDLMNRLSRYGWGLSE 566
Query: 819 PPPLFRKTALKMGLKDIPGIRL 840
PP + + A K+ L I G+ +
Sbjct: 567 PPRVPFQLAQKLRLTSIQGLNI 588
>gi|302407451|ref|XP_003001561.1| ATP-dependent RNA helicase MSS116 [Verticillium albo-atrum
VaMs.102]
gi|261360068|gb|EEY22496.1| ATP-dependent RNA helicase MSS116 [Verticillium albo-atrum
VaMs.102]
Length = 588
Score = 249 bits (635), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 170/473 (35%), Positives = 256/473 (54%), Gaps = 30/473 (6%)
Query: 386 ISPLTIKALTA-AGYIQMTRVQEATLSACLEG--KDAVVKAKTGTGKSIAFLLPAIEAVL 442
+ P +K +T + M VQ ATL L D +V+AKTGTGK+IAFLLPA++ ++
Sbjct: 86 VHPTIVKTITEDLKFDHMMPVQAATLHELLPPNRSDCLVQAKTGTGKTIAFLLPALQTMI 145
Query: 443 KATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRR 502
+ I +L++ PTRELA QIA EA LL+ V +GGT ++R
Sbjct: 146 TQNRGADAG----ISLLVISPTRELAMQIAKEATNLLQRLPKYRVRIAIGGTNKDREERA 201
Query: 503 LESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCL 562
+ C IL+ATPGRL DH+ N++ L L L LVLDEAD LLD+GF K + +IV L
Sbjct: 202 ILGG-CDILIATPGRLFDHMSNENVLWA-LRHLDTLVLDEADRLLDMGFMKALRDIVGQL 259
Query: 563 PRR----RQSLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHE 612
P + RQ +LFSAT+ LVL + +I T+ G + T ++ Q + P+
Sbjct: 260 PDKKATNRQGMLFSATIAPHVEQVAGLVLSPGYKFISTIPAGEINTHQRVPQLLIKVPYF 319
Query: 613 LHFQI-LHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK--MNVREMYSRKPQLY 669
+ ++E +K I+F T + L +L ++ V ++SR Q
Sbjct: 320 SSVSAAMVGSIREEARQHEAFKAILFAPTAALADLYGFVLEKIAGLPPVSILHSRISQNK 379
Query: 670 RDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEG 729
R +++ ++R S+ ILV +DV ARGMD+P VT+V QVGIP D++ YIHRLGRT R EG
Sbjct: 380 RTKVTNDYRDSRSAILVATDVVARGMDFPGVTTVFQVGIPADKQSYIHRLGRTARASAEG 439
Query: 730 EGVLLLAPWEEYFLD-DLKDLPLDKLQLPH-LNPEIQLQMDNHMAKIDNNVKEAAYHAWL 787
G+ +++ E +F LK++ +PH + +++ + ++ K Y AWL
Sbjct: 440 RGIFIVSEAEAWFPKWTLKEITF----VPHDADTSSAVEVSAIIDTMEEGDKAKIYQAWL 495
Query: 788 GYYNS-IREIGRDKTTLVELANKFAQ-SIGLQRPPPLFRKTALKMGLKDIPGI 838
GYYN+ ++ + DK LV N +A+ +G P + + TA KMGL+ G+
Sbjct: 496 GYYNNHMKALKWDKEELVAQGNIYARDGLGCPETPAIAKTTAGKMGLRGTRGL 548
>gi|121700863|ref|XP_001268696.1| DEAD box RNA helicase HelA, putative [Aspergillus clavatus NRRL 1]
gi|119396839|gb|EAW07270.1| DEAD box RNA helicase HelA, putative [Aspergillus clavatus NRRL 1]
Length = 663
Score = 249 bits (635), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 183/508 (36%), Positives = 267/508 (52%), Gaps = 59/508 (11%)
Query: 386 ISPLTIKALTAAGYIQ-MTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKA 444
++P I+A+ IQ MT VQ T+ L+G D + +AKTGTGK++AFL P ++ ++K
Sbjct: 86 VNPRIIRAIVKDMKIQTMTDVQSQTIQEILQGDDVLAQAKTGTGKTLAFLTPVLQNIMKD 145
Query: 445 TS-------SSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFK 497
S S+ I LI+ PTRELA QIA EA L H + V T VGGT +
Sbjct: 146 PSIQQGGSRRSSHASASDIRALIISPTRELAEQIAKEA-RRLAAHTNVVVQTAVGGTHKR 204
Query: 498 VDQRRLESDPCQILVATPGRLLDHI-ENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVE 556
RR++ + C +LV TPGRL D + +++SG++ L LVLDEAD LLD GF +D+
Sbjct: 205 EGLRRIQREGCHLLVGTPGRLKDILSDHRSGVTA--PNLSTLVLDEADRLLDDGFSEDIM 262
Query: 557 NIVDCLPR----RRQSLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSC 606
I LP RQ+L+FSAT+PKE L +K + +I TV V T + + Q
Sbjct: 263 EIQRLLPDPMKVERQTLMFSATVPKEVMKMVHLTMKPDFKFIKTVRDNEVPTHLTVPQKY 322
Query: 607 LVAP-HELHFQILHHLLKEHILGTPD------YKVIVFCSTGMVTSLLYLLLREMKMNVR 659
+V +E F L + +I + + +K IV+ ++ + T+L + R++ + R
Sbjct: 323 VVLKGYENAFPALLEYVTRYIEASNEDPTRRPFKAIVYFNSTVQTNLAFETFRQIFEDRR 382
Query: 660 ---------EMYSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPP 710
E++S+ Q R R S+ FRAS+ IL +SDV+ARGMD+PDVT V Q +P
Sbjct: 383 SQLRDVRLFEIHSQLTQARRTRSSDHFRASRSAILFSSDVTARGMDFPDVTHVFQFSLPK 442
Query: 711 DREQYIHRLGRTGREGKEGEGVLLLAPWEEYFLD-DLKDLPLDK-----------LQLPH 758
DR YIHRLGRT R K GEG L L E D L +P+++ + P
Sbjct: 443 DRATYIHRLGRTARANKTGEGWLFLHRGELSLFDRQLSGIPIEQDRETFASALVDMTQPR 502
Query: 759 LNPE-----IQLQMDNHMAKIDNNVKEAAYHAWLGYYNSIREIGRDKTTLVELANKF-AQ 812
++PE ++ + +I +K AY + +G +R + K +V N
Sbjct: 503 IDPEGPATPFIEKVGQAVNEIPIELKRRAYMSQMG---PLRGVFDRKLDMVHAINSLVVY 559
Query: 813 SIGLQRPPPLFRKTALKMGLKDIPGIRL 840
GL+ PP L +TA MG+ +PGIRL
Sbjct: 560 GYGLREPPRLSFQTARNMGIDQVPGIRL 587
>gi|346973660|gb|EGY17112.1| ATP-dependent RNA helicase [Verticillium dahliae VdLs.17]
Length = 580
Score = 248 bits (634), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 170/473 (35%), Positives = 256/473 (54%), Gaps = 30/473 (6%)
Query: 386 ISPLTIKALTA-AGYIQMTRVQEATLSACLEG--KDAVVKAKTGTGKSIAFLLPAIEAVL 442
+ P +K +T + M VQ AT+ L D +V+AKTGTGK+IAFLLPA++ ++
Sbjct: 86 VHPTIVKTITEDLKFDHMMPVQAATIHELLPPNRSDCLVQAKTGTGKTIAFLLPALQTMI 145
Query: 443 KATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRR 502
+ T I +L++ PTRELA QIA EA LL+ V +GGT ++R
Sbjct: 146 TQNRGADTG----ISLLVISPTRELAMQIAKEATNLLQRLPKHRVCIAIGGTNKDREERA 201
Query: 503 LESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCL 562
+ C IL+ATPGRL DH+ N++ L L L LVLDEAD LLD+GF K + +IV L
Sbjct: 202 ILGG-CDILIATPGRLFDHMSNENVLWA-LRHLDTLVLDEADRLLDMGFMKALRDIVGQL 259
Query: 563 PRR----RQSLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHE 612
P + RQ +LFSAT+ LVL + +I T+ G + T ++ Q + P+
Sbjct: 260 PDKKATNRQGMLFSATIAPHVEQVAGLVLSPGYKFISTIPAGEINTHQRVPQLLIKVPYF 319
Query: 613 LHFQI-LHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK--MNVREMYSRKPQLY 669
+ ++E +K I+F T + L +L ++ V ++SR Q
Sbjct: 320 SSVSAAMVGSIREEARQHEAFKAILFAPTAALADLYGFVLEKIAGLPPVSILHSRISQNK 379
Query: 670 RDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEG 729
R +++ ++R S+ ILV +DV ARGMD+P VT+V QVGIP D++ YIHRLGRT R EG
Sbjct: 380 RTKVTNDYRDSRSAILVATDVVARGMDFPGVTTVFQVGIPADKQSYIHRLGRTARASAEG 439
Query: 730 EGVLLLAPWEEYFLD-DLKDLPLDKLQLPH-LNPEIQLQMDNHMAKIDNNVKEAAYHAWL 787
G+ +++ E +F LK++ +PH + ++ + ++ K Y AWL
Sbjct: 440 RGIFIVSEAEAWFPKWTLKEITF----VPHDADTSSAAEVSAIIDTMEEGEKAKIYQAWL 495
Query: 788 GYYNS-IREIGRDKTTLVELANKFAQ-SIGLQRPPPLFRKTALKMGLKDIPGI 838
GYYN+ ++ + DK LV N +A+ +G P + + TA KMGL+ G+
Sbjct: 496 GYYNNHMKALKWDKEELVAQGNIYARDGLGCPETPAIAKTTAGKMGLRGTRGL 548
>gi|398399042|ref|XP_003852978.1| hypothetical protein MYCGRDRAFT_109102 [Zymoseptoria tritici
IPO323]
gi|339472860|gb|EGP87954.1| hypothetical protein MYCGRDRAFT_109102 [Zymoseptoria tritici
IPO323]
Length = 590
Score = 248 bits (634), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 160/471 (33%), Positives = 258/471 (54%), Gaps = 26/471 (5%)
Query: 391 IKALTAAGYIQMTRVQEATLSACLE-GKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSST 449
++ L Y M+ VQ+ L+ D +V+AKTGTGK+IAFL P+I ++LK +
Sbjct: 26 LRGLETMRYEFMSPVQQKVLTELPSFNADCLVQAKTGTGKTIAFLAPSIHSLLKQQNVPR 85
Query: 450 TQLVPPIYVLILCPTRELASQIAAEAIALLKN-HDGIGVLTLVGGTRFKVDQRRLESDPC 508
Q + +LI+ PTRELA QIAAE AL + V T GGT + D ++ S
Sbjct: 86 GQ----VAILIMSPTRELALQIAAECEALTTQLQPRMEVHTAYGGTSKERDLKKFMSGDP 141
Query: 509 QILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRR-- 566
+++VATPGRL D++ + + ++ + ++ L+LDEAD +L+ GF + +I+ LP +
Sbjct: 142 KVVVATPGRLNDYLSDDN-VAHKFSNIRTLILDEADQMLEAGFLIAITDILRRLPPKTTG 200
Query: 567 -QSLLFSATMPKEL------VLKREHTYIDTVGLGSVETPVKIKQSCLV--APHELHFQI 617
Q + FSATMPK++ VLK +T++ T+ T K++Q +V +P +++ +
Sbjct: 201 WQGMCFSATMPKKIEGVLPKVLKAGYTHLSTIDPNETPTIDKVQQHSVVVPSPGDVYTAL 260
Query: 618 LHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREM-----KMNVREMYSRKPQLYRDR 672
L KE+ +YKVIVF +T +L+ L + + V ++ SR Q R R
Sbjct: 261 WAMLQKEYEASPTNYKVIVFGTTANGVALMNSLFSNLLAGNNAIKVFQLQSRLSQAARTR 320
Query: 673 ISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGV 732
+ EF+ + I+ SDV RGMD+P+V+ V+QVG+P +QY+HR+GRT R G EG +
Sbjct: 321 TTNEFKVATAGIMFASDVIGRGMDFPNVSLVIQVGLPSSGDQYVHRVGRTARAGNEGRAI 380
Query: 733 LLLAPWEEYFLDDLKDLPLDKL--QLPHLNPEIQLQMDNHMAKIDNNVKEAAYHAWLGYY 790
+LL E +FL + LP+ L ++ ++D K AY AWLG++
Sbjct: 381 ILLTQRESFFLRVNRQLPITPYPNDLTATAASQAQAVEGAFNQVDEITKSKAYQAWLGFH 440
Query: 791 NSI-REIGRDKTTLVELANKFAQSIGLQRPPPLFRKTALKMGLKDIPGIRL 840
+ +++ LV AN +A+++G PP + + KMGLK + G+ +
Sbjct: 441 KTFTKQLQLSNDGLVAEANAYAEAMGCPEPPMIDKMVVGKMGLKGVNGLNV 491
>gi|429851785|gb|ELA26949.1| ATP-dependent RNA helicase mss116 [Colletotrichum gloeosporioides
Nara gc5]
Length = 594
Score = 248 bits (632), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 182/490 (37%), Positives = 258/490 (52%), Gaps = 48/490 (9%)
Query: 380 RF-DECGISPLTIKALTA-AGYIQMTRVQEATLSACLEGK--DAVVKAKTGTGKSIAFLL 435
RF D G+ ++A+T + M VQ ATL L K D +V+AKTGTGK+IAFLL
Sbjct: 81 RFADMVGVHQSLVQAITEDLKFDHMMPVQAATLDELLPPKRSDCLVQAKTGTGKTIAFLL 140
Query: 436 PAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTR 495
PAI+ +L I +L++ PTRELA QIA EA LL+ V +GGT
Sbjct: 141 PAIQTLLTQNRGRGGG----ISLLVISPTRELAMQIAKEAEGLLQRLRQYRVCIAIGGTN 196
Query: 496 FKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDV 555
+++++ C IL+ATPGRL+DH+ N+ + L LVLDEAD LLD+GF +
Sbjct: 197 KDREEKQILQG-CDILIATPGRLIDHMANEY-IQDSFRNLDTLVLDEADRLLDMGFMPAL 254
Query: 556 ENIVDCLPRR----RQSLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQS 605
++IV LP + RQ +LFSAT+ LVL + +I T+ G T ++ Q
Sbjct: 255 KDIVRALPDKSKTNRQGMLFSATIASHVQQVAGLVLSPGYKFISTIPAGEANTHERVPQH 314
Query: 606 CLVAP--HELHFQILHHLLKEHILGTPD-YKVIVFCSTGMVTSLLYLLLREMKM--NVRE 660
+ P + ++ + +E PD +K IVF T + +L M
Sbjct: 315 LIKVPTFASVAPAMVGAIREEAAFVGPDSFKAIVFAPTAALADFYGDILANMPGMPQASV 374
Query: 661 MYSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLG 720
++SR Q R +I+ ++R +K +LV +DV ARGMD+P VTSV QVGIP D+E YIHRLG
Sbjct: 375 LHSRISQGKRTKITNDYRDAKTGVLVATDVIARGMDFPGVTSVFQVGIPADKESYIHRLG 434
Query: 721 RTGREGKEGEGVLLLAPWEEYFLDDLKDLPLDKLQLPHLNPEIQLQMDNHMA-------- 772
RT R G EG G+ ++ E++F + QL +N E Q D A
Sbjct: 435 RTARAGAEGRGIFIVTDLEDFF---------PRWQLKEINFE-QRAADLSSAEQVYNIAE 484
Query: 773 -KIDNNVKEAAYHAWLGYY-NSIREIGRDKTTLVELANKFAQSIGLQRP--PPLFRKTAL 828
+ID K Y AWLGYY N ++++ +K LV N FA+ L+ P P + + T
Sbjct: 485 QRIDEAQKAKIYQAWLGYYKNWMKQLKWEKEDLVSEGNVFARD-ALRCPETPSIGKSTVG 543
Query: 829 KMGLKDIPGI 838
KMGL+ G+
Sbjct: 544 KMGLRGTRGL 553
>gi|389635279|ref|XP_003715292.1| hypothetical protein MGG_07099 [Magnaporthe oryzae 70-15]
gi|351647625|gb|EHA55485.1| hypothetical protein MGG_07099 [Magnaporthe oryzae 70-15]
gi|440466144|gb|ELQ35426.1| ATP-dependent RNA helicase mss116, mitochondrial precursor
[Magnaporthe oryzae Y34]
Length = 717
Score = 248 bits (632), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 174/512 (33%), Positives = 273/512 (53%), Gaps = 58/512 (11%)
Query: 376 LSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLL 435
L++ DE I +T+ Y MT VQ TL+ L+GKD V +AKTGTGK++AFL+
Sbjct: 79 LAKANIDESIIKAITVDM----RYEDMTDVQSMTLAPALKGKDLVAQAKTGTGKTLAFLI 134
Query: 436 PAIEAVLKATSS--STTQLVP-------PIYVLILCPTRELASQIAAEAIALLKNHDGIG 486
P I+ +L A S ++ P I +I+ PTRELA QI EA L + +G+
Sbjct: 135 PVIQKILDADPSLKEVSRGRPRRFAQRQSIKAIIISPTRELAEQIGKEATRLCQ-RNGVT 193
Query: 487 VLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENK-SGLSVRLMGLKMLVLDEADH 545
V T VGGT + RR+ + C +LV TPGRL D + ++ SG+ ++ LVLDEAD
Sbjct: 194 VQTAVGGTGKRESLRRIHMEGCHLLVGTPGRLNDLLSDELSGIDAS--NVQALVLDEADR 251
Query: 546 LLDLGFRKDVENIVDCLPRR----RQSLLFSATMPKELVL-------KREHTYIDTVGLG 594
+LD+GF ++ +IVD LP R RQ+LLFSAT+PK +V K+ ++ TV
Sbjct: 252 MLDVGFENELRSIVDMLPDRQQVPRQTLLFSATLPKNVVGLARWYVDKQNFEFVQTVRAD 311
Query: 595 SVETPVKIKQSCL-------VAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLL 647
++T ++ Q + + P L + ++ P +K IVF + ++
Sbjct: 312 EIQTHERVPQFIVPTSSFENLLPAALELMLREIRAAKNDPSQPPFKAIVFFPFTNMVAMA 371
Query: 648 YLLLREMKMNVREM------YSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVT 701
L RE+ + + ++ +++ Q R + ++ FR SK IL+++DV+ARGMD+P+VT
Sbjct: 372 GELFRELAVQIPDLPEVFHIHAQLSQNQRTKAADYFRKSKSGILISTDVTARGMDFPNVT 431
Query: 702 SVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLAPWE----EYFLDDL-----KDLPLD 752
V+QVG+PPD+EQYIHRLGRT R GK+G+G L + ++ Y L DL D+ +
Sbjct: 432 HVIQVGLPPDQEQYIHRLGRTARAGKDGQGWLFVPHYDLRDARYMLGDLPIKRNSDIKVA 491
Query: 753 KLQLPHLN----PEIQLQMDNHMAKIDNNVKEAAYHAWLGYYNSIREIGRDKTTLVELAN 808
+ +P + PE ++ + + +++ G +S R + T L EL +
Sbjct: 492 EFPVPPRSLDEAPEAYREVAKASRALPKGLLAESFYVQFG-KSSKRTL---PTLLKELTS 547
Query: 809 KFAQSIGLQRPPPLFRKTALKMGLKDIPGIRL 840
G +PP A K+GL ++PG+ +
Sbjct: 548 MTKNLWGWDKPPAFSPDRAAKLGLYNVPGVNI 579
>gi|440480684|gb|ELQ61337.1| ATP-dependent RNA helicase mss116, mitochondrial precursor
[Magnaporthe oryzae P131]
Length = 653
Score = 247 bits (630), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 174/512 (33%), Positives = 273/512 (53%), Gaps = 58/512 (11%)
Query: 376 LSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLL 435
L++ DE I +T+ Y MT VQ TL+ L+GKD V +AKTGTGK++AFL+
Sbjct: 79 LAKANIDESIIKAITVDM----RYEDMTDVQSMTLAPALKGKDLVAQAKTGTGKTLAFLI 134
Query: 436 PAIEAVLKATSS--STTQLVP-------PIYVLILCPTRELASQIAAEAIALLKNHDGIG 486
P I+ +L A S ++ P I +I+ PTRELA QI EA L + +G+
Sbjct: 135 PVIQKILDADPSLKEVSRGRPRRFAQRQSIKAIIISPTRELAEQIGKEATRLCQ-RNGVT 193
Query: 487 VLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENK-SGLSVRLMGLKMLVLDEADH 545
V T VGGT + RR+ + C +LV TPGRL D + ++ SG+ ++ LVLDEAD
Sbjct: 194 VQTAVGGTGKRESLRRIHMEGCHLLVGTPGRLNDLLSDELSGIDAS--NVQALVLDEADR 251
Query: 546 LLDLGFRKDVENIVDCLPRR----RQSLLFSATMPKELVL-------KREHTYIDTVGLG 594
+LD+GF ++ +IVD LP R RQ+LLFSAT+PK +V K+ ++ TV
Sbjct: 252 MLDVGFENELRSIVDMLPDRQQVPRQTLLFSATLPKNVVGLARWYVDKQNFEFVQTVRAD 311
Query: 595 SVETPVKIKQSCL-------VAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLL 647
++T ++ Q + + P L + ++ P +K IVF + ++
Sbjct: 312 EIQTHERVPQFIVPTSSFENLLPAALELMLREIRAAKNDPSQPPFKAIVFFPFTNMVAMA 371
Query: 648 YLLLREMKMNVREM------YSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVT 701
L RE+ + + ++ +++ Q R + ++ FR SK IL+++DV+ARGMD+P+VT
Sbjct: 372 GELFRELAVQIPDLPEVFHIHAQLSQNQRTKAADYFRKSKSGILISTDVTARGMDFPNVT 431
Query: 702 SVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLAPWE----EYFLDDL-----KDLPLD 752
V+QVG+PPD+EQYIHRLGRT R GK+G+G L + ++ Y L DL D+ +
Sbjct: 432 HVIQVGLPPDQEQYIHRLGRTARAGKDGQGWLFVPHYDLRDARYMLGDLPIKRNSDIKVA 491
Query: 753 KLQLPHLN----PEIQLQMDNHMAKIDNNVKEAAYHAWLGYYNSIREIGRDKTTLVELAN 808
+ +P + PE ++ + + +++ G +S R + T L EL +
Sbjct: 492 EFPVPPRSLDEAPEAYREVAKASRALPKGLLAESFYVQFG-KSSKRTL---PTLLKELTS 547
Query: 809 KFAQSIGLQRPPPLFRKTALKMGLKDIPGIRL 840
G +PP A K+GL ++PG+ +
Sbjct: 548 MTKNLWGWDKPPAFSPDRAAKLGLYNVPGVNI 579
>gi|392578172|gb|EIW71300.1| hypothetical protein TREMEDRAFT_27395, partial [Tremella
mesenterica DSM 1558]
Length = 562
Score = 247 bits (630), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 187/478 (39%), Positives = 253/478 (52%), Gaps = 55/478 (11%)
Query: 399 YIQMTRVQEATLSAC----------------LEG--KDAVVKAKTGTGKSIAFLLPAIEA 440
+ QMT VQ+ LS +EG D +VKA+TGTGK++AFL+PA+EA
Sbjct: 29 FKQMTEVQQRVLSLMPELAGRSLGTKEAGPDMEGLQSDLLVKARTGTGKTVAFLVPALEA 88
Query: 441 VLKATSS-STTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVD 499
L + +++ + VLI+ PTRELASQIA +A + H I V+ L GG K D
Sbjct: 89 RLNSLRGREGSKISKGVGVLIISPTRELASQIAKDAKRVSHWHRSIEVVLLTGGES-KRD 147
Query: 500 QRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIV 559
Q + I+VATPGRL D IE + + + L+LDEAD LLD+GF +++++IV
Sbjct: 148 QLKAFRKGRDIVVATPGRLNDLIETNAQVRDSIEKTATLILDEADTLLDMGFARELKSIV 207
Query: 560 DCLPRRRQSLLFSATMPKEL------VLKREHTYIDTVGLGSVETPVKIKQSCLVAPH-- 611
+ LP+ RQ+ LFSAT+ KE+ LK H +ID V I Q V P
Sbjct: 208 ESLPQDRQTFLFSATVSKEIRGIAKEFLKPNHHFIDCVPANESNVHHHIPQYANVLPSAA 267
Query: 612 ELHFQILHHLLKEHILG-TPDYKVIVFCSTGMVTSLLYLLLREMKMN------VREMYSR 664
E Q+L + + ++ T K+IVF T +T L LLRE+ + V E++S
Sbjct: 268 EQLPQVLRLIAHDQLINTTTSSKIIVFLPTTKMTMLFSTLLRELANSLPVRPFVSEIHSG 327
Query: 665 KPQLYRDRISEEFRASK-RLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTG 723
Q R R SE FR K ILVTSDVSARG+DYP VT V+QVG+P EQYIHR+GRTG
Sbjct: 328 LSQDRRSRTSERFRNDKGPSILVTSDVSARGVDYPGVTRVIQVGVPSSGEQYIHRVGRTG 387
Query: 724 REGKE-GEGVLLLAPWEEYFLDDLKDLPLDKLQLPHLNPEIQ-----LQMDNHMAKIDNN 777
R E G G ++L PWE+ FL +L +PL + L E Q M +A + N
Sbjct: 388 RAQAEGGRGDIILMPWEQGFLRELHQVPLKTQTVKDLEEENQRLANSRSMAEKVAALPNA 447
Query: 778 VK-----------EAAYHAWLGYY-NSIREIGRD-KTTLVELANKFAQSIGLQRPPPL 822
V+ E + A LG+Y RE+G + L EL ++GL PP L
Sbjct: 448 VQQLFPSLDPTALEEVFTAQLGFYVGRTRELGLSPEDILEELKEWSVGAMGLAEPPHL 505
>gi|378727281|gb|EHY53740.1| DEAD box RNA helicase HelA [Exophiala dermatitidis NIH/UT8656]
Length = 673
Score = 246 bits (629), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 172/494 (34%), Positives = 253/494 (51%), Gaps = 59/494 (11%)
Query: 402 MTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQL-VPPIYVLI 460
MT VQ T++ CL+G D V +A+TGTGK++AFL P ++ +L + +T + + I LI
Sbjct: 106 MTEVQRMTINECLDGSDVVAQARTGTGKTLAFLTPIVQRLLGDPALNTRRASINDIRALI 165
Query: 461 LCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLD 520
L PTRELA QI EA ++ G+ V T VGGT+ + + ++ C ILV TPGR+ D
Sbjct: 166 LSPTRELAEQIGEEARKIVSG-TGVQVQTAVGGTQKRYHLKLMQRMGCHILVGTPGRVKD 224
Query: 521 HIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRR----RQSLLFSATMP 576
+ + VRL ++ VLDEAD LLD+GF D+ I +P R RQ+L+FSATMP
Sbjct: 225 LLSDPDS-GVRLDNIQTFVLDEADRLLDIGFAPDIAEIQSYMPPRDQKDRQTLMFSATMP 283
Query: 577 KELV------LKREHTYIDTVGLGSVETPVKIKQSCLVAP---------HELHFQILHHL 621
+ +V +KR+ ++ T+ T + Q+ + P E+ ++ +
Sbjct: 284 RSVVGLVKQTMKRDFKFVRTIDPNEAATHESVPQNVVYLPGLENVLPTLAEISYKAVQ-A 342
Query: 622 LKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKM----------------NVREMYSRK 665
K P +K I+F ST + Y +LR M++ + EM SR
Sbjct: 343 HKADPTNNPPFKAIMFLSTINEVRMAYEVLRNMRLPGAKAGLFAPHPLAPCKIFEMSSRL 402
Query: 666 PQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGRE 725
Q R R S+ FR ++ ILV+SDV+ARGMD+P+VT V+QVG P E Y+HR+GRTGR
Sbjct: 403 TQAERTRNSQAFRHAESAILVSSDVAARGMDFPNVTHVIQVGPPKRLEDYVHRIGRTGRA 462
Query: 726 GKEGEGVLLLAPWEEY-FLDDLKDLPL------DKLQLPHLNPEIQLQMDNHMAKIDNNV 778
GK G+G L+L E F ++DL + L+ L+ Q+ KI V
Sbjct: 463 GKSGQGWLILQDDERNEFRQLVRDLHAHNISEDESLETAKLDMTQPTQLSAETGKIMQMV 522
Query: 779 KEA-----------AYHAWLGYYNSIREIGRDKTTLVELANKFAQ-SIGLQRPPPLFRKT 826
+ AY L N + R K T+VE+AN A+ GL+R P +
Sbjct: 523 EAGIRGVPIGDKIKAYEGVLASLNQ-SSVRRPKQTMVEMANNLARYGYGLERTPRISHSF 581
Query: 827 ALKMGLKDIPGIRL 840
A K+G + G+
Sbjct: 582 AQKLGFSGVRGLEF 595
>gi|124512888|ref|XP_001349800.1| DEAD box helicase, putative [Plasmodium falciparum 3D7]
gi|23615217|emb|CAD52207.1| DEAD box helicase, putative [Plasmodium falciparum 3D7]
Length = 630
Score = 246 bits (629), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 171/523 (32%), Positives = 271/523 (51%), Gaps = 41/523 (7%)
Query: 345 EEQVELIRKEISKNKLNGNGEKKEKREEEPILSQKRFDE--CGISPLTIKALTAA-GYIQ 401
+E E+I+ I +NK N ++ E+ K E C I K+L Y +
Sbjct: 116 KENEEVIKSNIDENK---NVHMNDQNEQNKHCYNKLLIESCCHIDKDVKKSLLEIFQYKE 172
Query: 402 MTRVQEATLSACLEGK---DAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLVPPIYV 458
T VQ ++ K D +++AKTGTGK+IA+LL +I ++K + ++
Sbjct: 173 FTDVQRIVYDNIIKEKKQNDLLIQAKTGTGKTIAYLLLSINDIIKNK-------ILSVHT 225
Query: 459 LILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ---RRLESDPCQILVATP 515
LI+ PTRELA+QI E LL I VLTL GG + + DQ RR++ D I++ T
Sbjct: 226 LIIVPTRELANQIYNECKLLLTYKHNINVLTLTGGIKRRDDQLNIRRIKPD---IIICTV 282
Query: 516 GRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQSLLFSATM 575
GRLLDH E+ + LKML++DEAD LL G+ D+ ++ LP R+++L SAT+
Sbjct: 283 GRLLDHFESTYLFNTLFENLKMLIIDEADQLLSTGYENDIHRLLTYLPSNRRNILLSATL 342
Query: 576 PKEL------VLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILHHLLKEHI-LG 628
L + K ++ Y++ V S T ++ Q L IL++LL EH+ L
Sbjct: 343 GYNLDEIRKKMCKSDYIYLNCVKDISKHTSDQLIQYVLFHKAIDTTIILYNLLIEHMRLN 402
Query: 629 TPDYKVIVFCSTGMVTSLL-YLLLREMKMNVREMYSRKPQLYRDRISEEFRASKRLILVT 687
YK+IVF T TS + ++K++V E++ +K +R + F IL T
Sbjct: 403 QFTYKIIVFFPTARATSFYAQFFINQLKISVYEIHRKKEMAHRQITANRFSMESVGILFT 462
Query: 688 SDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLAPWEEYFLDDLK 747
SD+S+RG++YPD+T ++QV P REQYIHR+GRT R K+G ++LL +E F ++K
Sbjct: 463 SDISSRGLNYPDITLIIQVNTPISREQYIHRVGRTARSNKKGMAIILLNEADELFYQEIK 522
Query: 748 DLPLDKLQLPHLNPEIQLQMDNHMAKIDNNVKEAAYHAWLGYYNSIREIGRDKTT----- 802
DL + KL + + + N+++ +N + Y A+ YY+SI + K T
Sbjct: 523 DLNIQKLNAQNYTLK-NTNLSNYLSTWMSNT-QLLYLAY-AYYSSILRFYKTKYTHLKIN 579
Query: 803 ---LVELANKFAQSIGLQRPPPLFRKTALKMGLKDIPGIRLRK 842
+++ N S GL P + R A + +++ +++RK
Sbjct: 580 DDEIIDAVNNMLLSTGLVEQPYISRNLATTLNMQNNVKLKIRK 622
>gi|326427800|gb|EGD73370.1| DEAD-box ATP-dependent RNA helicase 26 [Salpingoeca sp. ATCC 50818]
Length = 648
Score = 246 bits (629), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 180/509 (35%), Positives = 254/509 (49%), Gaps = 43/509 (8%)
Query: 366 KKEKREEEPILSQKRFDECGISPLTIKALTA-AGYIQMTRVQEATLSACLEGKDAVVKAK 424
K EKR E + RFD+ + KAL Y + + VQ +CL G D V+KAK
Sbjct: 98 KDEKRIESGDQAPVRFDDMNMDVRLKKALKQDFRYAEASLVQSMCFDSCLNGDDVVLKAK 157
Query: 425 TGTGKSIAFLLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKN-HD 483
TGTGK++ FLLP I+ + Q + VL++ PTRELA Q EA LL+
Sbjct: 158 TGTGKTLGFLLPTIQKHFRDARKMARQKPRRVPVLVIAPTRELAKQAETEADRLLRYLPR 217
Query: 484 GIGVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEA 543
+ + +GGT V +RLE P +L ATPGRLLD I G L++LVLDEA
Sbjct: 218 ELRAQSCIGGTPRGVSMKRLERVPPMVLAATPGRLLDMIRT-CGWENVFDDLRVLVLDEA 276
Query: 544 DHLLDLGFRKDVENIVDCLPRR---RQSLLFSATMPKE------LVLKREHTYIDTVGLG 594
D LLD+GFRK++E I+ L R RQ+LLFSAT P + L + ++ G
Sbjct: 277 DRLLDMGFRKEIEQILQHLNARQSKRQTLLFSATFPPDVEQMAKLACLQPPKMLEVPDAG 336
Query: 595 ---SVETPVKIKQSCLVAPHELHFQILHHLLKEHI----LGTPDYKVIVFCSTGMVTSLL 647
ET + Q + + LH ++ HI L KV+VF T + T
Sbjct: 337 KDQETETASSVTQRAVEVQMDSLLPSLHSMIHAHIAERKLQRMPSKVMVFFPTAVQTQFF 396
Query: 648 YLLLREMKMNVREMYSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVG 707
L + ++SR Q RDRIS FR +K +L T+DVSARG+DYP V+ VVQVG
Sbjct: 397 STLFERDSFKLYTLHSRMQQSKRDRISGTFRTAKDGVLFTTDVSARGIDYPGVSLVVQVG 456
Query: 708 IPPDREQYIHRLGRTGREGKEGEGVLLLAPWEEYFL-DDLKDLPLDKLQLPHLNPEIQLQ 766
+P REQY+HR+GRTGR G +G V+L P E F+ +LK LP+++ + + L
Sbjct: 457 LPSSREQYVHRVGRTGRGGSKGVAVMLTTPQEGTFVKSELKGLPIEQQSMHDIVSANGLV 516
Query: 767 MDNHMAKIDNNVKEA---------------------AYHAWLGYYNS-IREIGRDKTTLV 804
++ A +D + E+ Y ++LG+Y + + LV
Sbjct: 517 DASNTAAVDAMIDESRAFIAKRYDQLRKYDPERGSDTYLSFLGHYRGMLSTMKMSPQQLV 576
Query: 805 ELANKFAQ-SIGLQRPPPLFRKTALKMGL 832
+ N +A ++ L PP L + +MGL
Sbjct: 577 DFGNAYATDALMLPTPPVLSQSILARMGL 605
>gi|401409183|ref|XP_003884040.1| hypothetical protein NCLIV_037910 [Neospora caninum Liverpool]
gi|325118457|emb|CBZ54008.1| hypothetical protein NCLIV_037910 [Neospora caninum Liverpool]
Length = 566
Score = 246 bits (628), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 173/456 (37%), Positives = 248/456 (54%), Gaps = 47/456 (10%)
Query: 417 KDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLVPPIYV--LILCPTRELASQIAAE 474
+D +++A+TGTGK++ FLL IE +L L PP V L++ PTRELA+QI E
Sbjct: 106 RDCLIQARTGTGKTLCFLLVVIERML---------LQPPTGVGALVIAPTRELAAQILRE 156
Query: 475 AIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMG 534
A L+ H + V LVGG K D+ L+ QILV TPGRLLDH+EN S L
Sbjct: 157 AEQLVAFHP-VEVAALVGGNSRKADELLLKRRRPQILVCTPGRLLDHLENTFMFSALLEQ 215
Query: 535 LKMLVLDEADH-------------LLDLGFRKDVENIVDCLPRRRQSLLFSATMP---KE 578
L++LVLDEAD L++LG ++++ + LPR RQSLLFSAT+P +E
Sbjct: 216 LQILVLDEADRHVFLRYLCAEASSLMELGHLEELKQLFSYLPRNRQSLLFSATLPDNVRE 275
Query: 579 L---VLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILHHLLKEHILGTP-DYKV 634
L + K + + + V T +++QS +V P + IL +LL E P YK+
Sbjct: 276 LASRLFKPNYRFFNCVAPDEKPTHERVEQSVVVHPAKETATILFNLLTEEFERRPHSYKI 335
Query: 635 IVFCSTGMVTSLLYLLLRE-MKMNVREMYSRKPQLYRDRISEEFRASKRLILVTSDVSAR 693
IVF T +TS L RE ++ V E++ R+ R + F + +L +SDVSAR
Sbjct: 336 IVFFPTARLTSFFASLFREQFRIGVYEIHRRRESSTRAATASRFSRDRAGVLFSSDVSAR 395
Query: 694 GMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLAPWEEYFLDDLKDLPLDK 753
G+DYPDV+ V+QV P RE YIHR+GRTGR GK+G VLLL E FL+ ++DLPL +
Sbjct: 396 GVDYPDVSLVIQVCAPLTRELYIHRVGRTGRIGKDGRAVLLLNEAETRFLELVQDLPLQQ 455
Query: 754 LQ---LPHLNPEIQLQMDNHMAKIDNNVK-----EAAYHAWLGYYNSIR-EIG-RDKTTL 803
+ L P + ++ ++ D N + AAY + L +Y S R +G D +
Sbjct: 456 REERALQQRTPAV----NSALSSWDTNAQLNYAATAAYASLLNHYKSGRTRLGVSDDGVI 511
Query: 804 VELANKFAQSIGLQRPPPLFRKTALKMGLKDIPGIR 839
++ A S GL P + +K A + L P ++
Sbjct: 512 IQTALDICTSCGLSSQPAISKKLATLLNLDSHPKLK 547
>gi|119494753|ref|XP_001264188.1| DEAD box RNA helicase HelA, putative [Neosartorya fischeri NRRL
181]
gi|119412350|gb|EAW22291.1| DEAD box RNA helicase HelA, putative [Neosartorya fischeri NRRL
181]
Length = 662
Score = 245 bits (625), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 178/506 (35%), Positives = 267/506 (52%), Gaps = 56/506 (11%)
Query: 386 ISPLTIKALTAAGYIQ-MTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKA 444
+ P I+A+ I+ MT VQ TL L+G D + +AKTGTGK++AFL P + ++K
Sbjct: 91 VDPKIIRAIVKDMNIKTMTDVQSQTLREILQGDDVLAQAKTGTGKTLAFLTPVFQNIMKD 150
Query: 445 TS------SSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
S + I +I+ PTRELA QIA EA L H G+ V T VGGT+ +
Sbjct: 151 PSLKGLNRRRSQASSSDIRAIIISPTRELAEQIAVEA-RRLAAHSGVIVQTAVGGTQKRE 209
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
RR++ + C +L+ TPGRL D I + S + L LVLDEAD LLD GF +D+ NI
Sbjct: 210 GLRRIQREGCHVLIGTPGRLKD-ILSDSYNGITAPNLSTLVLDEADRLLDDGFSEDIINI 268
Query: 559 VDCLPR----RRQSLLFSATMPKELV------LKREHTYIDTVGLGSVETPVKIKQSCLV 608
LP RQ+L+FSAT+P+E++ +K ++ TV V T + + Q +V
Sbjct: 269 QRLLPDPMKVDRQTLMFSATVPREVMRMVRKTMKPNFKFVKTVRDDEVPTHLTVPQKYVV 328
Query: 609 A-PHELHFQILHHLLKEHILG---TPD---YKVIVFCSTGMVTSLLYLLLREM------- 654
+E L + +++ G P+ +K IV+ ++ + T+L+Y R +
Sbjct: 329 LRGYENAMPALLEFVTKYVEGENENPNQRPFKAIVYFNSTVQTNLVYETFRNIVEQRHHP 388
Query: 655 --KMNVREMYSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDR 712
++ V E++S+ Q R R S+ FRA+K IL +SDV+ARGMD+PDVT V+QV IP DR
Sbjct: 389 LRRVRVYEIHSQLTQARRTRSSDFFRAAKSAILFSSDVTARGMDFPDVTHVIQVSIPRDR 448
Query: 713 EQYIHRLGRTGREGKEGEGVLLLAPWE-EYFLDDLKDLPLDK-----------LQLPHLN 760
YIHRLGRT R K GEG +L E F L+ +PL++ + P L+
Sbjct: 449 ATYIHRLGRTARANKTGEGWVLTHRGELPEFGRQLEGIPLNQDKQTFTTATVDMSKPELD 508
Query: 761 PE-----IQLQMDNHMAKIDNNVKEAAYHAWLGYYNSIREIGRDKTTLVELANK-FAQSI 814
PE ++ + + ++ ++K AY + +G +R K L++ N
Sbjct: 509 PESPATRFIKEVKDAVQEVPEDLKRRAYMSQIG---PLRGYFARKRDLIQAINDCVVHGY 565
Query: 815 GLQRPPPLFRKTALKMGLKDIPGIRL 840
GL PP + A +GL +PG+R+
Sbjct: 566 GLPEPPQMSPTVARNLGLDRVPGVRV 591
>gi|453086014|gb|EMF14056.1| DEAD-domain-containing protein [Mycosphaerella populorum SO2202]
Length = 711
Score = 245 bits (625), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 190/533 (35%), Positives = 274/533 (51%), Gaps = 76/533 (14%)
Query: 373 EPILSQKRFDECGI-SPLTIKALTA-AGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKS 430
EPI K + I P ++ALT G MT VQ TL+ ++G D + +A+TGTGK+
Sbjct: 70 EPITRFKDLETHNIVHPNIVRALTEHMGLETMTEVQTRTLNEAIKGVDVIAQARTGTGKT 129
Query: 431 IAFLLPAIEAVLKATSSSTTQ---------LVPPIYVLILCPTRELASQIAAEAIALLKN 481
+AFLLP ++ ++ S + I LI+ PTRELA QIA EA L +N
Sbjct: 130 LAFLLPILQRIINDDPSIAERGHGRRGRHMTADDIRGLIISPTRELAEQIAVEAKKLCRN 189
Query: 482 HDGIGVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLD 541
G+ V T VGGT+ R ++ + C +LV TPGRL D + ++ V L+ LV D
Sbjct: 190 -TGVIVQTAVGGTQKSAGLRAIQREGCHLLVGTPGRLKDILSDRDS-RVEAPDLQALVFD 247
Query: 542 EADHLLDLGFRKDVENIVDCLP----RRRQSLLFSATMPKELV------LKREHTYIDTV 591
EAD LLD GF DV++I+ LP + RQ+L+FSAT+PKE+V LK ++ V
Sbjct: 248 EADRLLDQGFWPDVQDIMRLLPDTVEKDRQTLMFSATLPKEVVRIVRSTLKPGFNFVKCV 307
Query: 592 GLGSVETPVKIKQ---------SCLVAPHELHFQILHHLLKEHILGTPDYKVIVFC-STG 641
T V++ Q +C+ A EL + + GT YK +VF ST
Sbjct: 308 RDDEEPTHVRVPQKSVSLVGLENCVPALIELCQRAIE---ASRSSGTRPYKAVVFFNSTA 364
Query: 642 MVT--SLLYLLLRE------------------MKMNVREMYSRKPQLYRDRISEEFRASK 681
VT + + L LRE + + E++++ Q R R +++FR+++
Sbjct: 365 EVTLATSVLLGLREESAQHADNVGRGKGAHPWYPIRIFEIHAKLSQQQRSRAADDFRSAQ 424
Query: 682 RLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLAPWEEY 741
IL++SDV+ARGMD+PDVT V+Q+G+PP REQYIHRLGRT R GKEGEG + L P ++
Sbjct: 425 SGILLSSDVTARGMDFPDVTHVIQIGLPPSREQYIHRLGRTARAGKEGEGWIFLNPVDQA 484
Query: 742 -FLDDLKDLPL---DKLQLPHLNPEIQLQMDNHMAKI----DNNVKEAA-------YHAW 786
L+DL L D LQ+P ++ + + +I N +K A Y A
Sbjct: 485 EARSRLRDLNLTKDDTLQIPKMDLTQPADVPAYAGRILSMYQNAIKSVALSEKTKVYLAQ 544
Query: 787 LGYYNSIREIGRDKTTLVELANKFAQ-SIGLQRPPPLFRKTALKMGLKDIPGI 838
G Y K LV + N ++ GL PP + A ++ LK + GI
Sbjct: 545 FGIYQWFNR----KQQLVHMINNLSRFGWGLSTPPCVPPGLAARLRLKKLEGI 593
>gi|145226688|gb|ABP48103.1| DEAD-box helicase [Plasmodium falciparum]
Length = 630
Score = 245 bits (625), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 171/523 (32%), Positives = 270/523 (51%), Gaps = 41/523 (7%)
Query: 345 EEQVELIRKEISKNKLNGNGEKKEKREEEPILSQKRFDE--CGISPLTIKALTAA-GYIQ 401
+E E+I+ I +NK N ++ E+ K E C I K+L Y +
Sbjct: 116 KENEEVIKSNIDENK---NVHMNDQNEQNKHCYNKLLIESCCHIDKDVKKSLLEIFQYKE 172
Query: 402 MTRVQEATLSACLEGK---DAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLVPPIYV 458
T VQ ++ K D +++AKTGTGK+IA+LL +I ++K + ++
Sbjct: 173 FTDVQRIVYDNIIKEKKQNDLLIQAKTGTGKTIAYLLLSINDIIKNK-------ILSVHT 225
Query: 459 LILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ---RRLESDPCQILVATP 515
LI+ PTRELA+QI E LL I VLTL GG + + DQ RR++ D I++ T
Sbjct: 226 LIIVPTRELANQIYNECKLLLTYKHNINVLTLTGGIKRRDDQLNIRRIKPD---IIICTV 282
Query: 516 GRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQSLLFSATM 575
GRLLDH E+ + LKML++DEAD LL G+ D+ ++ LP R+++L SAT+
Sbjct: 283 GRLLDHFESTYLFNTLFENLKMLIIDEADQLLSTGYENDIHRLLTYLPSNRRNILLSATL 342
Query: 576 PKEL------VLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILHHLLKEHI-LG 628
L + K ++ Y++ V S T ++ Q L IL++LL EH+ L
Sbjct: 343 GYNLDEIRKKMCKSDYIYLNCVKDISKHTSDQLIQYVLFHKAIDTTIILYNLLIEHMRLN 402
Query: 629 TPDYKVIVFCSTGMVTSLL-YLLLREMKMNVREMYSRKPQLYRDRISEEFRASKRLILVT 687
YK+IVF T TS + ++K++V E++ +K +R + F IL T
Sbjct: 403 QFTYKIIVFFPTARATSFYAQFFINQLKISVYEIHRKKEMAHRQITANRFSMESVGILFT 462
Query: 688 SDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLAPWEEYFLDDLK 747
SD+S+RG++YPD+T ++QV P REQYIHR+GRT R K+G ++LL +E F ++K
Sbjct: 463 SDISSRGLNYPDITLIIQVNTPISREQYIHRVGRTARSNKKGMAIILLNEADELFYQEIK 522
Query: 748 DLPLDKLQLPHLNPEIQLQMDNHMAKIDNNVKEAAYHAWLGYYNSIREIGRDKTT----- 802
DL KL + + + N+++ +N + Y A+ YY+SI + K T
Sbjct: 523 DLNTQKLNAQNYTLK-NTNLSNYLSTWMSNT-QLLYLAY-AYYSSILRFYKTKYTHLKIN 579
Query: 803 ---LVELANKFAQSIGLQRPPPLFRKTALKMGLKDIPGIRLRK 842
+++ N S GL P + R A + +++ +++RK
Sbjct: 580 DDEIIDAVNNMLLSTGLVEQPYISRNLATTLNMQNNVKLKIRK 622
>gi|237832477|ref|XP_002365536.1| RNA helicase, putative [Toxoplasma gondii ME49]
gi|211963200|gb|EEA98395.1| RNA helicase, putative [Toxoplasma gondii ME49]
Length = 654
Score = 244 bits (624), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 168/440 (38%), Positives = 243/440 (55%), Gaps = 28/440 (6%)
Query: 417 KDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLVPP--IYVLILCPTRELASQIAAE 474
+D++++A+TGTGK++ FLL IE +L L PP + L++ PTRELA+QI E
Sbjct: 210 RDSLIQARTGTGKTLCFLLAIIERLL---------LQPPSGVGALVIAPTRELATQILRE 260
Query: 475 AIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMG 534
A L+ H V LVGG K D+ L+ QILV TPGRLLDH+EN S L
Sbjct: 261 AEQLVTFHP-FDVAALVGGNSRKADELALKRKRPQILVCTPGRLLDHLENTFMFSALLER 319
Query: 535 LKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQSLLFSATMPKEL------VLKREHTYI 588
L++LVLDEAD L++LG ++++ I LPR RQSLLFSAT+P + + K+ + ++
Sbjct: 320 LQLLVLDEADRLMELGHLEELKQIFSYLPRTRQSLLFSATLPDNVRDLASRLFKQNYRFL 379
Query: 589 DTVGLGSVETPVKIKQSCLVAPHELHFQILHHLLKEHILGTP-DYKVIVFCSTGMVTSLL 647
+ V T ++ QS ++ + +L +LLKE P YK+IVF T +TS
Sbjct: 380 NCVAPDEKPTHERVAQSVVMHAAKETATVLFNLLKEEFERRPHSYKIIVFFPTARLTSFF 439
Query: 648 YLLLRE-MKMNVREMYSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQV 706
L RE ++ V E++ R+ R + F + +L +SDVSARG+DYPDV+ V+QV
Sbjct: 440 AALFREQFRIGVYEIHRRRESSARAATASRFSRDRAGVLFSSDVSARGVDYPDVSLVIQV 499
Query: 707 GIPPDREQYIHRLGRTGREGKEGEGVLLLAPWEEYFLDDLKDLPLDKLQLPHLNPEIQLQ 766
P RE YIHR+GRTGR KEG VLLL E FL+ ++DLPL + L
Sbjct: 500 CAPLTRELYIHRVGRTGRIEKEGRAVLLLNEAETRFLELIQDLPLQQRDAQSLQQRTA-A 558
Query: 767 MDNHMAKIDNNVK-----EAAYHAWLGYYNSIREIGR--DKTTLVELANKFAQSIGLQRP 819
++ ++ D N + AAY + L +Y S R R D +++ A S GL
Sbjct: 559 VNAALSSWDTNAQLHYAATAAYASLLNHYKSGRTRLRVADDGLVIQTALDICASCGLSSQ 618
Query: 820 PPLFRKTALKMGLKDIPGIR 839
P + +K A + L+ P ++
Sbjct: 619 PAVSKKLATLLNLESHPKLK 638
>gi|321258482|ref|XP_003193962.1| RNA helicase [Cryptococcus gattii WM276]
gi|317460432|gb|ADV22175.1| RNA helicase, putative [Cryptococcus gattii WM276]
Length = 706
Score = 244 bits (623), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 161/433 (37%), Positives = 234/433 (54%), Gaps = 54/433 (12%)
Query: 415 EGKDAVVKAKTGTGKSIAFLLPAIEAVL-------KATSSSTTQLVPP------------ 455
E +D +VKAKTGTGK++AFL+PA++A + KA + T +P
Sbjct: 162 EREDLLVKAKTGTGKTMAFLVPAVDARINTLERLSKAPNPDGT--IPDKHAQGRNHRAIS 219
Query: 456 ---IYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILV 512
+ LI+ PTRELA+QIA EA L H + V + VGG + ++V
Sbjct: 220 RSHVGALIISPTRELATQIAVEAEKLCTWHKDLSVHSFVGGESRHRQLKEFSRQSKDVVV 279
Query: 513 ATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQSLLFS 572
ATPGRL D I ++ + L MLVLDEAD LLD+GF D++ I+D LP+ RQ+L FS
Sbjct: 280 ATPGRLRDLI-SEPVVKDALAKTDMLVLDEADTLLDMGFSDDLKFIIDHLPKERQTLFFS 338
Query: 573 ATMPKELV------LKREHTYIDTVGLGSVETPVKIKQSCLVAPHEL-HFQILHHLLKEH 625
AT+ KE+ L++ H ID V + I Q V P + L+ +
Sbjct: 339 ATVSKEIAAIARHSLRKGHKVIDCVPKNESNVHLHIPQYATVVPSSADAMPHIMRLIAQD 398
Query: 626 ILGTPDYKVIVFCSTGMVTSLLYLLLREM------KMNVREMYSRKPQLYRDRISEEFRA 679
+ P K+++F +T T L L+RE+ + +V E++S+ Q R R S++FR
Sbjct: 399 QMANPKSKIVLFLNTTKQTMLTATLVRELLDTLPQRTSVYEIHSKLDQNKRTRSSDKFRK 458
Query: 680 SKR-LILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLAPW 738
+R +LVTSDVSARG+DYP VT V+Q+G+P EQYIHR+GRTGR GKEG G L+L P+
Sbjct: 459 EQRPAVLVTSDVSARGVDYPGVTRVIQLGVPSSTEQYIHRVGRTGRAGKEGRGDLVLFPF 518
Query: 739 EEYFLDDLKDLPLDKLQLPHLNPEIQLQMDNHMAK---------------IDNNVKEAAY 783
E FLD LKD+P+ ++ + L ++ + A +D E +
Sbjct: 519 EAGFLDQLKDIPIQRISISDLASDVITSAPSSYASALDSLPSAVEELLPTLDPKAIEEVF 578
Query: 784 HAWLGYYNSIREI 796
+ LGYY+S +++
Sbjct: 579 MSMLGYYHSKQQM 591
>gi|453084182|gb|EMF12227.1| DEAD-domain-containing protein [Mycosphaerella populorum SO2202]
Length = 553
Score = 244 bits (622), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 162/474 (34%), Positives = 256/474 (54%), Gaps = 30/474 (6%)
Query: 391 IKALTAAGYIQMTRVQEATLSACLE-GKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSST 449
++ L GY M+ VQ+ LS D +V+AKTGTGK+IAFLLPA+ ++L +
Sbjct: 24 LRGLAGMGYEFMSPVQQKVLSELPSFSADCLVQAKTGTGKTIAFLLPALHSLLANPNVPR 83
Query: 450 TQLVPPIYVLILCPTRELASQIAAEAIALLKNHDG-IGVLTLVGGTRFKVDQRR-LESDP 507
Q + +LI PTRELA QIA E A+ + T GGT + D + L DP
Sbjct: 84 GQ----VGILICSPTRELALQIAKECNAVTAQLPSRLECHTAYGGTSKERDLKAFLNGDP 139
Query: 508 CQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRR- 566
+I+VATPGRL D++ N ++ + L+ LVLDEAD +L+ GF + I+ +P +
Sbjct: 140 -KIVVATPGRLNDYL-NDEYVAEKFTNLRTLVLDEADQMLEAGFLVAINEILRRVPPKDK 197
Query: 567 ---QSLLFSATMPKEL------VLKREHTYIDTVGLGSVETPVKIKQSCLVAP--HELHF 615
Q + FSAT+P+++ +L ++HT++ TV T ++ Q ++ P +E++
Sbjct: 198 THWQGMCFSATIPEKIKSVLPKILSKQHTHLSTVDPNETPTIDRVLQHSVIVPSNYEVYP 257
Query: 616 QILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREM-----KMNVREMYSRKPQLYR 670
+ L +E+ D+KVIVF T +L++ L + + V ++ SR Q R
Sbjct: 258 ALWALLQQEYAATKGDFKVIVFGCTANGVALMHALFTNLLHSNNAIKVFQLQSRLTQANR 317
Query: 671 DRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGE 730
R + EF+ +K ++ SDV RGMD+P+V+ V+QVG+P + +QY+HR+GRT R G EG
Sbjct: 318 TRTTNEFKEAKAGVMFASDVIGRGMDFPNVSHVIQVGLPSNGDQYVHRVGRTARAGNEGR 377
Query: 731 GVLLLAPWEEYFLDDLKDLPLDKLQLPHLNPEIQLQ---MDNHMAKIDNNVKEAAYHAWL 787
++LL E +FL K LP+ I Q + A + K AY AWL
Sbjct: 378 AMILLTQRESFFLKVNKRLPITPYPADLTGAAITEQAREVQIAFADVQEITKSKAYQAWL 437
Query: 788 GYYNSI-REIGRDKTTLVELANKFAQSIGLQRPPPLFRKTALKMGLKDIPGIRL 840
G++ +++ LVE N++A ++G PP + ++ KMGLK + G+ +
Sbjct: 438 GFHKVFTKQLQLTNDGLVEQVNEYAAAMGCPEPPMIDKRVVGKMGLKGVRGLNI 491
>gi|83314623|ref|XP_730441.1| RNA helicase [Plasmodium yoelii yoelii 17XNL]
gi|23490163|gb|EAA22006.1| RNA helicase [Plasmodium yoelii yoelii]
Length = 656
Score = 243 bits (621), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 156/466 (33%), Positives = 258/466 (55%), Gaps = 35/466 (7%)
Query: 399 YIQMTRVQEATLSACLEGK---DAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLVPP 455
Y T VQ+ ++ K D +++AKTGTGK+I++LL I+ ++K +
Sbjct: 197 YKHFTDVQKIIYENVIKEKKKNDLLIQAKTGTGKTISYLLLVIDDIIKNR-------IMS 249
Query: 456 IYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ---RRLESDPCQILV 512
++ LI+ PTRELA+QI EA LL + I VLTL+GG + + DQ RR++ D I++
Sbjct: 250 VHTLIIVPTRELANQIYNEAKLLLTFKNNINVLTLIGGVKRREDQINIRRVKPD---III 306
Query: 513 ATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQSLLFS 572
T GRLLDH E + LKML++DEAD LL G++ D++ I+ LP++++++L S
Sbjct: 307 CTVGRLLDHFECTYLFNTLFENLKMLIIDEADQLLSHGYQNDIDRILTYLPQKKRNILLS 366
Query: 573 ATMPKEL------VLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILHHLLKEHI 626
AT+ + + K ++ +++ + S T ++KQ + IL++LL EH+
Sbjct: 367 ATLCHNINEIRKKMCKPDYLFLNCIKDISKHTNDQLKQYVIFHKSIDTTIILYNLLVEHM 426
Query: 627 -LGTPDYKVIVFCSTGMVTSLLYLLLR-EMKMNVREMYSRKPQLYRDRISEEFRASKRLI 684
L +YK++VF T TS L + ++K++V E++ +K +YR S F I
Sbjct: 427 RLNKFNYKILVFFPTARATSFYANLFKNQLKISVYEIHRKKEPIYRQITSNRFALESVGI 486
Query: 685 LVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLAPWEEYFLD 744
L TSD+SARG++YP+VT ++Q+ REQYIHR+GRT R KEG ++LL +E F
Sbjct: 487 LFTSDISARGINYPNVTLIIQINCAISREQYIHRVGRTARSDKEGISIILLNEADELFYQ 546
Query: 745 DLKDLPLDKLQLPHLNPEIQLQMDNHMAKIDNNVKEAAYHAWLGYYNSIREIGRDKTTLV 804
+KDL + KL P+ + N++ +N + Y A+ YY+S+ + K T++
Sbjct: 547 QIKDLNIQKLN-PNEYILKNANVSNYLNTWMSNT-QLLYLAY-AYYSSLLRFYKTKHTIL 603
Query: 805 EL--------ANKFAQSIGLQRPPPLFRKTALKMGLKDIPGIRLRK 842
+L N S GL P + + A+ + +++ +++RK
Sbjct: 604 KLTDDEIIDTVNNSLLSTGLAEQPHISNQLAVTLNMQNNVKLKIRK 649
>gi|367022492|ref|XP_003660531.1| hypothetical protein MYCTH_2298956 [Myceliophthora thermophila ATCC
42464]
gi|347007798|gb|AEO55286.1| hypothetical protein MYCTH_2298956 [Myceliophthora thermophila ATCC
42464]
Length = 630
Score = 242 bits (617), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 186/512 (36%), Positives = 270/512 (52%), Gaps = 65/512 (12%)
Query: 380 RFDEC---GISPLTIKALTAA-GYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLL 435
RF++ G+ + +LT GY MT VQ T+S L GKD V +AKTGTGK++AFL+
Sbjct: 77 RFEDLRRLGVHEHLVNSLTKGLGYETMTDVQSMTISPALAGKDVVAQAKTGTGKTLAFLV 136
Query: 436 PAIEAVLKATSSSTTQLVPP----------IYVLILCPTRELASQIAAEAIALLKNHDGI 485
P I+ ++ +S +L P I ++L PTRELA QI EA L + G+
Sbjct: 137 PVIQRLI----ASQPELASPRAGGRARSDDIRAIVLSPTRELAEQIGVEAKKLCRG-TGV 191
Query: 486 GVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADH 545
+ T VGGT+ R+ + C +LVATPGRL D + ++S + L LVLDEAD
Sbjct: 192 VIQTAVGGTQKNAMLRKTRIEGCHLLVATPGRLHDLLSDRS-TGIDAPNLAALVLDEADR 250
Query: 546 LLDLGFRKDVENIVDCLPRR----RQSLLFSATMPKELV-LKREHT------YIDTVGLG 594
+LD+GF+ ++E+I+D LP RQ+LL+SAT+PK +V + R+ ++ TV
Sbjct: 251 MLDVGFKAELESILDYLPHPVDVPRQTLLYSATIPKNVVNIARKFINPTNFEFVQTVRAD 310
Query: 595 SVETPVKIKQSCLVAP---HELHFQILHHLLKEHILGTPD------YKVIVFCSTGMVTS 645
V T ++ Q + P E L L++ + T D +K IVF T
Sbjct: 311 EVPTHERVPQ--FIVPCRGFENLPPTLLELVRRELRKTLDDSDKLPFKAIVFLPTTSSVQ 368
Query: 646 LLYLLLREMKMNVREM------YSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPD 699
+ R +K + R M +S+ Q R R ++ FR +K IL +SDVSARGMD+P+
Sbjct: 369 AYATIFRRLKFHDRLMPRIFDIHSKLSQAARTRSADNFRQAKSAILFSSDVSARGMDFPN 428
Query: 700 VTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLAPWE-EYFLDDLKDLPLDK---LQ 755
VT V+QV +P DR+ YIHR+GRTGR GK+GE LL A E L LP+ + L+
Sbjct: 429 VTHVIQVHLPQDRDLYIHRIGRTGRAGKQGEAYLLTADVEIPAARSRLPGLPIKRCTDLE 488
Query: 756 LPHLN-------PEIQLQMDNHMAKIDNNVKEAAYHAWLGYYNSIREIGRDKTTLV-ELA 807
++ P++ + N KI V + Y + LG N+I+++ DK +V EL
Sbjct: 489 CASMDVARAADVPQVIEDIKNAAVKIPYEVVKDTYASLLG--NAIKDV--DKQDVVYELN 544
Query: 808 NKFAQSIGLQRPPPLFRKTALKMGLKDIPGIR 839
N GL +PP L K G + I G+R
Sbjct: 545 NMVKYIFGLDQPPALSTKFVNHFG-RHIKGLR 575
>gi|70996346|ref|XP_752928.1| DEAD box RNA helicase HelA [Aspergillus fumigatus Af293]
gi|74672187|sp|Q4WRP2.1|MS116_ASPFU RecName: Full=ATP-dependent RNA helicase mss116, mitochondrial;
Flags: Precursor
gi|66850563|gb|EAL90890.1| DEAD box RNA helicase HelA, putative [Aspergillus fumigatus Af293]
gi|159131682|gb|EDP56795.1| DEAD box RNA helicase HelA, putative [Aspergillus fumigatus A1163]
Length = 655
Score = 242 bits (617), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 179/521 (34%), Positives = 269/521 (51%), Gaps = 57/521 (10%)
Query: 372 EEPILSQKRFDECG-ISPLTIKALTAAGYIQ-MTRVQEATLSACLEGKDAVVKAKTGTGK 429
+EP+ E G + P I+A+ I+ MT VQ TL L+G D + +AKTGTGK
Sbjct: 76 QEPLREFTDLAERGLVDPKIIRAIVKDMNIKTMTDVQSQTLREILQGDDVLAQAKTGTGK 135
Query: 430 SIAFLLPAIEAVLKATS------SSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHD 483
++AFL P + ++K S + I +I+ PTRELA QIA EA L H
Sbjct: 136 TLAFLTPVFQNIMKDPSLKGLNWRRSQASSSDIRAIIISPTRELAEQIAVEA-RRLAAHS 194
Query: 484 GIGVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEA 543
G+ V T VGGT+ + RR++ + C +L+ TPGRL D + + V L LVLDEA
Sbjct: 195 GVIVQTAVGGTQKREGLRRIQREGCHVLIGTPGRLKDVLSDSYN-GVTAPNLSTLVLDEA 253
Query: 544 DHLLDLGFRKDVENIVDCLPR----RRQSLLFSATMPKELV------LKREHTYIDTVGL 593
D LLD GF + +I LP RQ+L+FSAT+P+E++ +K ++ TV
Sbjct: 254 DRLLDDGFSDAIIDIQRLLPDPMKVDRQTLMFSATVPREVMQMVRKTMKPNFKFVKTVRD 313
Query: 594 GSVETPVKIKQSCLVA-PHELHFQILHHLLKEHILGTPD------YKVIVFCSTGMVTSL 646
V T + + Q ++ +E L + +++ G + +K IV+ ++ + T+L
Sbjct: 314 DEVPTHLTVPQKYVILRGYENAMPALLEFVTKYVEGEKENPNQRPFKAIVYFNSTVQTNL 373
Query: 647 LYLLLREM---------KMNVREMYSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDY 697
+Y R + ++ V E++S+ Q R R S+ FRA+K IL +SDV+ARGMD+
Sbjct: 374 VYETFRNIVEQRHHPLRRVRVYEIHSQLTQARRTRSSDFFRAAKSAILFSSDVTARGMDF 433
Query: 698 PDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLAPWE-EYFLDDLKDLPLD---- 752
PDVT V+QV IP DR YIHRLGRT R K GEG +L E FL L+ +PL+
Sbjct: 434 PDVTHVIQVSIPRDRATYIHRLGRTARANKTGEGWVLTHRGELPEFLKQLEGIPLNLDKE 493
Query: 753 -------KLQLPHLNPE------IQLQMDNHMAKIDNNVKEAAYHAWLGYYNSIREIGRD 799
+ P L+P+ IQ ++ + + ++ ++K AY + LG R
Sbjct: 494 TFATATVDMTKPELDPKSPATRFIQ-EIKDAVREVPESLKRRAYTSLLGPLRGY--FARK 550
Query: 800 KTTLVELANKFAQSIGLQRPPPLFRKTALKMGLKDIPGIRL 840
+ + + N GL PP L A +GL +PG+R+
Sbjct: 551 QDLIQAINNCVVHGYGLPVPPQLSPTLARNLGLDRVPGVRI 591
>gi|115398680|ref|XP_001214929.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114191812|gb|EAU33512.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 553
Score = 241 bits (616), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 167/485 (34%), Positives = 260/485 (53%), Gaps = 58/485 (11%)
Query: 391 IKALTAAGYIQMTRVQEATLSACLEGK-DAVVKAKTGTGKSIAFLLPAIEAVLKATSSST 449
++A+ G+ MT VQ L+ + + D +V+AKTGTGK++AFLLPA+ +LK S+
Sbjct: 25 LQAVDKMGFADMTPVQHRVLTELPDWRSDCLVQAKTGTGKTLAFLLPALHCLLKGNSA-- 82
Query: 450 TQLVPP---IYVLILCPTRELASQIAAEAIAL-------LKNHDGIGVLTLVGGTRFKVD 499
PP + +LI+ PTRELA QIA L L+ H +G G R
Sbjct: 83 ----PPRGQVAILIITPTRELAQQIAKSCDQLTSQLPKPLECHIAVG-----GTARASAH 133
Query: 500 QRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIV 559
R ++ P +LVATPGRL D++ ++S + +L ++ L+LDEAD +LD GF DV+ I+
Sbjct: 134 ARFMKGAP-SVLVATPGRLKDYLSDES-TAEKLSNIQTLILDEADTMLDSGFIADVKRIL 191
Query: 560 DCLPRRR---QSLLFSATM-PK-----ELVLKREHTYIDTVGLGSVETPVKIKQSCLVAP 610
+P + Q + FSAT+ PK +VLK +T I T+ T ++ Q ++ P
Sbjct: 192 QLIPPKSAGWQGMCFSATVSPKVKDVISVVLKSGYTSISTIEKNEAPTHERVPQYHVLIP 251
Query: 611 HELH-FQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLRE--MKMNVREMYSRKPQ 667
F L LL + K+IVF T + +L + + + V E++SR Q
Sbjct: 252 SVAQTFTTLTSLLNLEMKAC--SKIIVFGITANMVALFAGVFSQGLTPLRVFEIHSRLSQ 309
Query: 668 LYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGK 727
R + + +F+ + IL SDV RGMD+P+V V+QVG+P + EQY+HR+GRT R G
Sbjct: 310 SARTKTTNQFKEAAAGILFASDVIGRGMDFPNVDLVIQVGLPSNAEQYVHRVGRTARAGN 369
Query: 728 EGEGVLLLAPWEEYFLDDLKDLPLDKLQLPHLNPEIQL----------QMDNHMAKIDNN 777
+G ++LL E +FL + + LP+ PH P+ + + M ID
Sbjct: 370 DGRAIILLTQAESFFLKNNRHLPIQ----PH--PQTNMINEGASSCADAVTQAMYNIDEV 423
Query: 778 VKEAAYHAWLGYYNS---IREIGRDKTTLVELANKFA-QSIGLQRPPPLFRKTALKMGLK 833
K+ AY +++G++ ++++ DK LV+LAN+ A + + PPP+ +K KMGLK
Sbjct: 424 TKQRAYSSFIGFFAGSGLMKQLRLDKPGLVQLANELAIEGMACPEPPPMDKKVVGKMGLK 483
Query: 834 DIPGI 838
+PG
Sbjct: 484 GVPGF 488
>gi|405122869|gb|AFR97635.1| RNA helicase [Cryptococcus neoformans var. grubii H99]
Length = 718
Score = 241 bits (616), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 160/433 (36%), Positives = 234/433 (54%), Gaps = 54/433 (12%)
Query: 415 EGKDAVVKAKTGTGKSIAFLLPAIEAVL-------KATSSSTTQLVPP------------ 455
E +D +VKAKTGTGK++AFL+PAI+A + KA + T +P
Sbjct: 162 EREDLLVKAKTGTGKTMAFLVPAIDARINTLERLSKAPNPDGT--IPDKHAQGRNHRAIS 219
Query: 456 ---IYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILV 512
+ LI+ PTRELA+QIA EA L H + V + VGG + ++V
Sbjct: 220 RSHVGALIISPTRELATQIAVEAGKLCTWHKDLSVHSFVGGESRLRQLKEFSRQSKDVVV 279
Query: 513 ATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQSLLFS 572
ATPGRL D I ++ + L MLVLDEAD LLD+GF D++ I+D LP+ RQ+L FS
Sbjct: 280 ATPGRLRDLI-SEPLVKDALAKTDMLVLDEADTLLDMGFSDDLKFIIDHLPKERQTLFFS 338
Query: 573 ATMPKELV------LKREHTYIDTVGLGSVETPVKIKQSCLVAPHELH-FQILHHLLKEH 625
AT+ +E+ L++ H ID V + I Q V P + L+ +
Sbjct: 339 ATVSREIAAIARHSLRKGHKVIDCVPKNESNVHLHIPQYATVVPSSADAMPHIMRLIAQD 398
Query: 626 ILGTPDYKVIVFCSTGMVTSLLYLLLREM------KMNVREMYSRKPQLYRDRISEEFRA 679
+ P K+++F +T T L L+RE+ + V E++S+ Q R R S++FR
Sbjct: 399 QMANPKSKIVLFLNTTKQTMLTATLVRELLDTLPAQTAVYEIHSKLDQNKRTRSSDKFRR 458
Query: 680 SKR-LILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLAPW 738
+R +LVTSDVSARG+DYP VT V+Q+G+P EQYIHR+GRTGR GKEG G L+L P+
Sbjct: 459 EQRPAVLVTSDVSARGVDYPGVTRVIQLGVPSTTEQYIHRVGRTGRAGKEGRGDLVLFPF 518
Query: 739 EEYFLDDLKDLPLDKLQLPHLNPEIQLQ---------------MDNHMAKIDNNVKEAAY 783
E FLD LK +P+ ++ L ++ + ++N + +D E +
Sbjct: 519 EAGFLDHLKGIPIQRISTSDLASDVIARAPSSYASALDSLPSAVENLLPTLDPKAVEEVF 578
Query: 784 HAWLGYYNSIREI 796
+ LGYY+S +++
Sbjct: 579 MSMLGYYHSKQQM 591
>gi|389586011|dbj|GAB68740.1| RNA helicase [Plasmodium cynomolgi strain B]
Length = 578
Score = 241 bits (615), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 158/468 (33%), Positives = 250/468 (53%), Gaps = 29/468 (6%)
Query: 394 LTAAGYIQMTRVQEATLSACLEGK---DAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTT 450
L Y Q T VQ+ + K D +V+AKTGTGK+I++LL AI + K
Sbjct: 114 LEVFKYKQFTDVQKIIYENVIRKKKTNDLLVQAKTGTGKTISYLLLAINDIEKNK----- 168
Query: 451 QLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQI 510
+ ++ LI+ PTRELA+QI EA LL + I VLTL+GG + + DQ L I
Sbjct: 169 --IMSVHTLIIVPTRELANQIYNEAKLLLTFKNNINVLTLIGGIKRREDQINLRRVKPDI 226
Query: 511 LVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQSLL 570
++ T GRLLDH E + LKML++DEAD LL LG+ D+ I+ LP++R++ L
Sbjct: 227 VICTVGRLLDHFECTYLFNTLFDNLKMLIIDEADQLLSLGYENDINRILTYLPKKRRNFL 286
Query: 571 FSATMPKEL------VLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILHHLLKE 624
FSAT+ + + K ++ +++ V S T ++KQ + IL++LL E
Sbjct: 287 FSATLSHNIEEIRQKMCKPDYMFLNCVKDPSKHTNEQLKQYVIFHKAVDTTVILYNLLME 346
Query: 625 HI-LGTPDYKVIVFCSTGMVTSLLYLLLR-EMKMNVREMYSRKPQLYRDRISEEFRASKR 682
H+ L YK++VF T T + ++K++V E++ +K R + F
Sbjct: 347 HMRLNQFTYKILVFFPTARATCFYANFFKTQLKISVYEIHRKKEPAQRQITANRFAVESV 406
Query: 683 LILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLAPWEEYF 742
IL TSD+S+RG++YPDVT ++QV REQYIHR+GRT R K+G G+LLL +E F
Sbjct: 407 GILFTSDISSRGINYPDVTLIIQVNCAISREQYIHRVGRTARSNKKGTGILLLNEADELF 466
Query: 743 LDDLKDLPLDKLQLPHLNPEIQLQMDNHMAKIDNNVKEAAYHAWLGYYNSIREIGRDKTT 802
+KDL ++ L P+ + + N+++ +N + Y A+ YY+S+ + K
Sbjct: 467 YQQIKDLNIEVLN-PNDYLLKNVNVSNYLSSWMSNT-QLLYLAY-AYYSSLLRFYKTKYA 523
Query: 803 --------LVELANKFAQSIGLQRPPPLFRKTALKMGLKDIPGIRLRK 842
++++ N S GL P + K A+ + +++ +++RK
Sbjct: 524 TLKLSDDEIIDVVNNSLLSTGLVEQPHISSKLAITLNMQNNARLKIRK 571
>gi|134116760|ref|XP_773052.1| hypothetical protein CNBJ3280 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50255672|gb|EAL18405.1| hypothetical protein CNBJ3280 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 710
Score = 239 bits (609), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 161/433 (37%), Positives = 232/433 (53%), Gaps = 54/433 (12%)
Query: 415 EGKDAVVKAKTGTGKSIAFLLPAIEAVL-------KATSSSTTQLVPPIYV--------- 458
E +D +VKAKTGTGK++AFL+PAI+A + KA + T +P +
Sbjct: 162 EREDLLVKAKTGTGKTMAFLVPAIDARINTLERLSKAPNPDGT--IPDKHAQGRNHRAIS 219
Query: 459 ------LILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILV 512
LI+ PTRELA+QIA EA L H + V + VGG + ++V
Sbjct: 220 RSHLGALIISPTRELATQIAVEAEKLCTWHKDLTVHSFVGGESRLRQLKEFSRRSKDVVV 279
Query: 513 ATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQSLLFS 572
ATPGRL D I ++ + L MLVLDEAD LLD+GF +D++ I+D LP+ RQ+L FS
Sbjct: 280 ATPGRLRDLI-SEPLVKDALAKTDMLVLDEADTLLDMGFSEDLKFIIDHLPKERQTLFFS 338
Query: 573 ATMPKELV------LKREHTYIDTVGLGSVETPVKIKQSCLVAPHEL-HFQILHHLLKEH 625
AT+ KE+ L++ H ID V + I Q V P + L+ +
Sbjct: 339 ATVSKEIAAIARHSLRKGHKVIDCVPKNESNVHLHIPQYATVVPSSADAMPHIMRLIAQD 398
Query: 626 ILGTPDYKVIVFCSTGMVTSLLYLLLREM------KMNVREMYSRKPQLYRDRISEEFRA 679
+ P K+++F +T T L L+RE+ + V E++S+ Q R R S++FR
Sbjct: 399 QMANPKSKIVLFLNTTKQTMLTATLVRELVDTLPAQTAVYEIHSKLDQNKRTRSSDKFRR 458
Query: 680 SKR-LILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLAPW 738
R +LVTSDVSARG+DYP VT V+Q+G+P EQYIHR+GRTGR GKEG G L+L P+
Sbjct: 459 EHRPAVLVTSDVSARGVDYPGVTRVIQLGVPSTTEQYIHRVGRTGRAGKEGRGDLVLFPF 518
Query: 739 EEYFLDDLKDLPLDKLQLPHLNPEIQLQMDNHMAKI---------------DNNVKEAAY 783
E FLD LK +P+ ++ L ++ + + A + D E +
Sbjct: 519 EAGFLDHLKGIPIQRISTSDLTSDVIAKAPSSYASVIDSLPSAVESLLPTLDPKAVEEVF 578
Query: 784 HAWLGYYNSIREI 796
+ LGYY+S +++
Sbjct: 579 MSMLGYYHSKQQM 591
>gi|242778464|ref|XP_002479244.1| DEAD box RNA helicase HelA, putative [Talaromyces stipitatus ATCC
10500]
gi|218722863|gb|EED22281.1| DEAD box RNA helicase HelA, putative [Talaromyces stipitatus ATCC
10500]
Length = 654
Score = 239 bits (609), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 179/511 (35%), Positives = 266/511 (52%), Gaps = 62/511 (12%)
Query: 386 ISPLTIKALTAAGYIQ-MTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKA 444
+ P I ++T I MT VQ+ T++ + G D + +AKTGTGK++AFL+P ++ ++
Sbjct: 89 VHPRIIHSITERMNINTMTDVQKLTIAHSVTGADVLAQAKTGTGKTLAFLVPVLQRIITN 148
Query: 445 TSS----STTQLVPP----IYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRF 496
S S + P I +I+ PTRELA QI+ EA + G+ V T VGGTR
Sbjct: 149 DPSLVQRSRGRFDGPDSQDIRAIIISPTRELAEQISVEARKVAAG-TGVVVQTAVGGTRK 207
Query: 497 KVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVE 556
+ R+ + C +LVATPGRL D + + V L +LVLDEAD LLD GF ++E
Sbjct: 208 QEGLNRIRREGCHVLVATPGRLKDILSDYRS-RVAAPNLDILVLDEADRLLDDGFGPEIE 266
Query: 557 NIVDCLP----RRRQSLLFSATMPKELV------LKREHTYIDTVGLGSVETPVKIKQS- 605
+I D LP R RQ+L+FSAT+P+E++ +K + +I TV V T +++ Q
Sbjct: 267 SIKDLLPDPSVRDRQTLMFSATVPREVMGMVRRSMKPKFQFIKTVSEDEVPTHLRVPQKM 326
Query: 606 CLVAPHELHFQILHHLLKEHI-LGTPD-----YKVIVFCSTGMVTSLLY-----LLLREM 654
+ E + + +LK ++ D K IV+ +T + L + LL M
Sbjct: 327 VFLRGFENGYPTIVEILKRYMDRAAADQNLRPMKAIVYFNTTVEVQLAHEAFGALLSDPM 386
Query: 655 KM--------NVREMYSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQV 706
+ + ++S+ Q R S+ FR ++ IL++SDV+ARG+D+PDVT V+QV
Sbjct: 387 QRRSGNPLGRKILHIHSKLSQAQRTHFSDAFRRAESGILISSDVTARGLDFPDVTHVIQV 446
Query: 707 GIPPDREQYIHRLGRTGREGKEGEGVLLLAPWEE-YFLDDLKDLPL-------------- 751
GIP +RE YIHRLGRTGR GKEG+G +L+ EE F++ L DLP+
Sbjct: 447 GIPRNRESYIHRLGRTGRAGKEGQGWVLIHDEEERSFVEQLGDLPIEQDNSIEAANADMS 506
Query: 752 --DKLQLPHLNPEIQLQMDNHMAKIDNNVKEAAYHAWLGYYNSIREIGRDKTTLVELANK 809
D L P E Q+ + + VKE AY L +S GR + + L +
Sbjct: 507 KPDSLSGP--VAETISQVTAALKLVPYEVKEDAYRIQLSANSST--FGRKRNLVAALNDL 562
Query: 810 FAQSIGLQRPPPLFRKTALKMGLKDIPGIRL 840
GL PP + A K+G +PG+R+
Sbjct: 563 AKNGWGLPEPPAVSPSMASKLGYDRVPGLRM 593
>gi|58259733|ref|XP_567279.1| RNA helicase [Cryptococcus neoformans var. neoformans JEC21]
gi|57229329|gb|AAW45762.1| RNA helicase, putative [Cryptococcus neoformans var. neoformans
JEC21]
Length = 710
Score = 238 bits (608), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 161/433 (37%), Positives = 232/433 (53%), Gaps = 54/433 (12%)
Query: 415 EGKDAVVKAKTGTGKSIAFLLPAIEAVL-------KATSSSTTQLVPPIYV--------- 458
E +D +VKAKTGTGK++AFL+PAI+A + KA + T +P +
Sbjct: 162 EREDLLVKAKTGTGKTMAFLVPAIDARINTLERLSKAPNPDGT--IPDKHAQGRNHRAIS 219
Query: 459 ------LILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILV 512
LI+ PTRELA+QIA EA L H + V + VGG + ++V
Sbjct: 220 RSHLGALIISPTRELATQIAVEAEKLCTWHKDLTVHSFVGGESRLRQLKEFSRRSKDVVV 279
Query: 513 ATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQSLLFS 572
ATPGRL D I ++ + L MLVLDEAD LLD+GF +D++ I+D LP+ RQ+L FS
Sbjct: 280 ATPGRLRDLI-SEPLVKDALAKTDMLVLDEADTLLDMGFSEDLKFIIDHLPKERQTLFFS 338
Query: 573 ATMPKELV------LKREHTYIDTVGLGSVETPVKIKQSCLVAPHEL-HFQILHHLLKEH 625
AT+ KE+ L++ H ID V + I Q V P + L+ +
Sbjct: 339 ATVSKEIAAIARHSLRKGHKVIDCVPKNESNVHLHIPQYATVVPSSADAMPHIMRLIAQD 398
Query: 626 ILGTPDYKVIVFCSTGMVTSLLYLLLREM------KMNVREMYSRKPQLYRDRISEEFRA 679
+ P K+++F +T T L L+RE+ + V E++S+ Q R R S++FR
Sbjct: 399 QMANPKSKIVLFLNTTKQTMLTATLVRELVDTLPAQTAVYEIHSKLDQNKRTRSSDKFRR 458
Query: 680 SKR-LILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLAPW 738
R +LVTSDVSARG+DYP VT V+Q+G+P EQYIHR+GRTGR GKEG G L+L P+
Sbjct: 459 EHRPAVLVTSDVSARGVDYPGVTRVIQLGVPSTTEQYIHRVGRTGRAGKEGRGDLVLFPF 518
Query: 739 EEYFLDDLKDLPLDKLQLPHLNPEIQLQMDNHMAKI---------------DNNVKEAAY 783
E FLD LK +P+ ++ L ++ + + A + D E +
Sbjct: 519 EAGFLDHLKGIPIQRISTSDLTSDVIAKAPSSYASVIDSLPSAVESLLPTLDPKAVEEVF 578
Query: 784 HAWLGYYNSIREI 796
+ LGYY+S +++
Sbjct: 579 MSMLGYYHSKQQM 591
>gi|68076661|ref|XP_680250.1| DEAD box helicase [Plasmodium berghei strain ANKA]
gi|56501154|emb|CAH98243.1| DEAD box helicase, putative [Plasmodium berghei]
Length = 552
Score = 238 bits (608), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 154/466 (33%), Positives = 257/466 (55%), Gaps = 35/466 (7%)
Query: 399 YIQMTRVQEATLSACLEGK---DAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLVPP 455
Y T VQ+ ++ + D +++AKTGTGK+I++LL I+ ++K +
Sbjct: 93 YKHFTDVQKIIYENVIKERKKNDLLIQAKTGTGKTISYLLLVIDDIIKNR-------IIS 145
Query: 456 IYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ---RRLESDPCQILV 512
++ LI+ PTRELA+QI E LL + I VLTL+GG + + DQ RR++ D I++
Sbjct: 146 VHTLIIVPTRELANQIYNETKLLLTFKNNINVLTLIGGVKRREDQINIRRVKPD---III 202
Query: 513 ATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQSLLFS 572
T GRLLDH E + LKML++DEAD LL G++ D++ I+ LP++++++L S
Sbjct: 203 CTVGRLLDHFECTYLFNTLFENLKMLIIDEADQLLSHGYQNDIDRILTYLPQKKRNILLS 262
Query: 573 ATMPKEL------VLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILHHLLKEHI 626
AT+ + + K ++ +++ + S T ++KQ + IL++LL EH+
Sbjct: 263 ATLCHNINEIRKKMCKPDYFFLNCIKDISKHTNDQLKQYAIFHKSIDTTIILYNLLVEHM 322
Query: 627 -LGTPDYKVIVFCSTGMVTSLLYLLLR-EMKMNVREMYSRKPQLYRDRISEEFRASKRLI 684
L +YK++VF T TS L + ++K++V E++ +K +YR S F I
Sbjct: 323 RLNKFNYKILVFFPTARATSFYANLFKNQLKISVYEIHRKKEPIYRQITSNRFALESVGI 382
Query: 685 LVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLAPWEEYFLD 744
L TSD+SARG++YP+VT ++Q+ REQYIHR+GRT R KEG ++LL +E F
Sbjct: 383 LFTSDISARGINYPNVTLIIQINCAISREQYIHRVGRTARSDKEGISIILLNEADELFYQ 442
Query: 745 DLKDLPLDKLQLPHLNPEIQLQMDNHMAKIDNNVKEAAYHAWLGYYNSIREIGRDKTTLV 804
+KDL + KL P+ + N++ +N + Y A+ YY+S+ + K T++
Sbjct: 443 QIKDLNIQKLN-PNEYILKNANVSNYLNTWMSNT-QLLYLAY-AYYSSLLRFYKTKHTIL 499
Query: 805 EL--------ANKFAQSIGLQRPPPLFRKTALKMGLKDIPGIRLRK 842
+L N S GL P + + A+ + +++ +++RK
Sbjct: 500 KLTDDEIIDTVNNSLLSTGLAEQPHISNQLAVTLNMQNNVKLKIRK 545
>gi|259484908|tpe|CBF81531.1| TPA: conserved hypothetical protein [Aspergillus nidulans FGSC A4]
Length = 567
Score = 238 bits (607), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 167/480 (34%), Positives = 253/480 (52%), Gaps = 48/480 (10%)
Query: 391 IKALTAAGYIQMTRVQEATLSACLEGK-DAVVKAKTGTGKSIAFLLPAIEAVLKATSSST 449
++AL G+ M+ VQ+ L+ + D +V+AKTGTGK++AFLLPA+ +++ S
Sbjct: 23 LQALNVLGFEYMSPVQQRVLTELPTWRSDCLVQAKTGTGKTVAFLLPALHCLIQGQSQVR 82
Query: 450 TQLVPPIYVLILCPTRELASQIAAEAIAL-------LKNHDGIGVLTLVGGTRFKVDQRR 502
V +LI+ PTRELA QIA L L+ H +G G R R
Sbjct: 83 RGQV---AILIITPTRELAQQIAKSCDELTSQLSRPLECHIAVG-----GTARASAHSRF 134
Query: 503 LESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCL 562
+ DP ILVATPGRL D++ ++S + +L ++ LVLDEAD +L+ GF DV+ I+ +
Sbjct: 135 MNGDP-SILVATPGRLKDYL-SESETAEKLKDIQTLVLDEADTMLETGFLADVKQILKLI 192
Query: 563 PRRR---QSLLFSATMPKEL------VLKREHTYIDTVGLGSVETPVKIKQSCLVAPHEL 613
P + Q + FSAT+P ++ VL +T I TV T ++ Q ++ P
Sbjct: 193 PSKSTGWQGMCFSATLPPKVKDVVSVVLNPGYTSISTVDKNEPPTHERVPQYYVLMPSVA 252
Query: 614 H-FQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLRE--MKMNVREMYSRKPQLYR 670
F L LL + K+IVF T + +L + + V E++SR Q R
Sbjct: 253 ETFTTLSSLLAHE--SKKNTKIIVFGVTANMVALSHSAFANGLTPLKVFEIHSRLSQSAR 310
Query: 671 DRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGE 730
R + +F+ + IL SDV RGMD+P+V VVQVG+P + EQY+HR+GRT R G +G
Sbjct: 311 TRTTSQFKEADAGILFASDVIGRGMDFPNVDLVVQVGLPSNAEQYVHRVGRTARAGNDGR 370
Query: 731 GVLLLAPWEEYFLDDLKDLPLDKLQLPHLNPEIQL--------QMDNHMAKIDNNVKEAA 782
V+LL E +FL + LP+ PH + L + M +D K+ A
Sbjct: 371 AVILLTESESFFLKANRHLPIQ----PHPDASSILANATSCSPAVTQAMYAVDETTKQRA 426
Query: 783 YHAWLGYYNS---IREIGRDKTTLVELANKFA-QSIGLQRPPPLFRKTALKMGLKDIPGI 838
Y +++G++ ++++ DK LV+LAN+ A + + PPP+ +K KMGLK +PG
Sbjct: 427 YSSYIGFFAGSGLMKQLRLDKPGLVQLANELAIKGMACPEPPPMDKKIVGKMGLKGVPGF 486
>gi|145228425|ref|XP_001388521.1| ATP-dependent RNA helicase MSS116 [Aspergillus niger CBS 513.88]
gi|134054610|emb|CAK43455.1| unnamed protein product [Aspergillus niger]
Length = 548
Score = 238 bits (606), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 162/477 (33%), Positives = 254/477 (53%), Gaps = 42/477 (8%)
Query: 391 IKALTAAGYIQMTRVQEATLSACLEGK-DAVVKAKTGTGKSIAFLLPAIEAVLKATSSST 449
++AL G+ MT VQ+ L+ + + D +V+AKTGTGK++AFLLP + +L +
Sbjct: 25 LQALNVLGFTHMTPVQQRVLTELPDWRSDCLVQAKTGTGKTLAFLLPTLHCLLNGS---- 80
Query: 450 TQLVPP---IYVLILCPTRELASQIAAEAIALLKNHD-GIGVLTLVGGTRFKVDQRRLES 505
+ PP + VLI+ PTRELA QIA L + VGGT R
Sbjct: 81 --MAPPRGQVAVLIVTPTRELAQQIAKSCDQLTSQMAVPLKCDIAVGGTARASAFSRFMR 138
Query: 506 DPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRR 565
+ +LVATPGRL D++ +++L +K L+LDEAD +L+ GF DV++I+ +P +
Sbjct: 139 EAPSVLVATPGRLKDYLSEPEA-AIKLSNIKTLILDEADTMLESGFLADVKHIIRHIPPK 197
Query: 566 R---QSLLFSATMPKEL------VLKREHTYIDTVGLGSVETPVKIKQSCLVAPHEL-HF 615
Q + FSAT+P ++ VLK ++ I T+ T ++ Q ++ P F
Sbjct: 198 SAGWQGMCFSATLPPKVRDVVSVVLKPGYSSISTIDENETPTHERVPQYHVLMPSVADSF 257
Query: 616 QILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLRE--MKMNVREMYSRKPQLYRDRI 673
L +L+ + K+IVF T + SL K++V E++SR Q R +
Sbjct: 258 TTLASVLQLETKNS--SKIIVFGVTANMVSLFAAAFSRGLTKLSVFEIHSRLSQSARTKT 315
Query: 674 SEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVL 733
+ +F+ + IL SDV RGMD+P+V V+QVG+P + EQY+HR+GRT R G +G ++
Sbjct: 316 TAQFKEAAAGILFASDVIGRGMDFPNVDLVIQVGLPTNGEQYVHRVGRTARAGNDGRAII 375
Query: 734 LLAPWEEYFLDDLKDLPLDKLQLPHLNPEIQLQ--------MDNHMAKIDNNVKEAAYHA 785
LL E +FL + + LP+ PH + ++ + M ID K+ AY +
Sbjct: 376 LLTEAETFFLRNNRHLPIQ----PHPQTDAIIEAAASYADTVAEAMYTIDEEKKQRAYSS 431
Query: 786 WLGYYNS---IREIGRDKTTLVELANKFA-QSIGLQRPPPLFRKTALKMGLKDIPGI 838
++G++ ++++ DKT LV++AN A Q + PP + +K KMGLK IPG
Sbjct: 432 FIGFFAGSGLLKQLRLDKTGLVQMANDMAIQGMACPEPPVIDKKIVGKMGLKGIPGF 488
>gi|302696487|ref|XP_003037922.1| hypothetical protein SCHCODRAFT_47986 [Schizophyllum commune H4-8]
gi|300111619|gb|EFJ03020.1| hypothetical protein SCHCODRAFT_47986, partial [Schizophyllum
commune H4-8]
Length = 478
Score = 238 bits (606), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 173/459 (37%), Positives = 253/459 (55%), Gaps = 46/459 (10%)
Query: 413 CLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLVPP---IYVLILCPTRELAS 469
L+ KD +V+AKTGTGK++A+L+P+IE + Q PP + LI+ PTR+LA
Sbjct: 1 ALQNKDLLVQAKTGTGKTLAYLVPSIEKL---------QGKPPGEGVAALIIAPTRDLAL 51
Query: 470 QIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLS 529
QI A+A LL+ + V VGGT + ++RR ILVATPGRLLDH+ + +S
Sbjct: 52 QIEAQARRLLEGSE-YSVRRAVGGTEYVHEERRQLLRGGDILVATPGRLLDHLSSPD-VS 109
Query: 530 VRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRR----RQSLLFSATMPKELV----- 580
RL + LV DE D LL+ GF+++++ IV+ LPR RQ+L++SAT+ E+
Sbjct: 110 ARLASVSTLVYDEVDRLLEEGFKRELDAIVELLPRHEDVARQTLMYSATIDDEVKQVASK 169
Query: 581 -LKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHF----QILHHLLKEH-ILGT---PD 631
L+ +I T T + QS VA F +L +KEH I+G+
Sbjct: 170 HLQPSFEFIKTFSEDEAGTHEHVPQSYHVASFVDSFPVAISVLQDDIKEHAIVGSEKKST 229
Query: 632 YKVIVFCSTGMVTSLLYLLLREMKM--NVREMYSRKPQLYRDRISEEFRASKRLILVTSD 689
K IVF T +L+ +K V +++ R R+ ++E F+ ++ ILV+SD
Sbjct: 230 SKAIVFLPTTRQVDWATAVLKRIKGLPEVYDIHGRMTMQKRNYVAEAFKKAETAILVSSD 289
Query: 690 VSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLAPWEEYFLD--DLK 747
V+ARGMD+P VT V+QVG+P D +QYIHRLGRT R G G GV++L P E+YFL ++
Sbjct: 290 VTARGMDFPGVTLVLQVGVPNDADQYIHRLGRTARAGASGRGVIILDPSEQYFLSLPQIR 349
Query: 748 DLPLDKLQLPHLNPE-IQLQMDNHMA---KIDNNVKEAAYHAWLGYYNS-IREIGRDKTT 802
LPL+K P ++ + +Q D A KI +VK AY AWL YY S + +T
Sbjct: 350 RLPLEK--APSISADRLQFLSDAVAATFSKIPADVKADAYRAWLSYYASQTHHLRWSRTR 407
Query: 803 LVELA-NKFAQSIG--LQRPPPLFRKTALKMGLKDIPGI 838
LVE + +G L PP+ + A + L ++ G+
Sbjct: 408 LVEEGLDYVVGGLGWHLDYAPPIAKSVATMLRLGEVRGV 446
>gi|212533585|ref|XP_002146949.1| DEAD box RNA helicase HelA, putative [Talaromyces marneffei ATCC
18224]
gi|210072313|gb|EEA26402.1| DEAD box RNA helicase HelA, putative [Talaromyces marneffei ATCC
18224]
Length = 667
Score = 237 bits (605), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 180/509 (35%), Positives = 269/509 (52%), Gaps = 59/509 (11%)
Query: 386 ISPLTIKALTAAGYIQ-MTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAV--- 441
+ P I ++T I MT VQ+ T+S + G D + +AKTGTGK++AFL+P ++ +
Sbjct: 90 VHPRIIHSITEKMKINSMTDVQKQTISHSVTGADILAQAKTGTGKTLAFLVPVLQRIIAN 149
Query: 442 ----LKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFK 497
L+ + + I +I+ PTRELA QI+ EA + G+ V T VGGTR +
Sbjct: 150 DPNLLQRSRGFSRADSHDIRAIIISPTRELAEQISVEARKVAAG-TGVVVQTAVGGTRKQ 208
Query: 498 VDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVEN 557
R+ + C +LVATPGRL D + + + V L +LVLDEAD LLD GF ++E+
Sbjct: 209 EGLNRIRREGCHVLVATPGRLKDILSDYTS-RVAAPNLDILVLDEADRLLDDGFGPEIES 267
Query: 558 IVDCLP----RRRQSLLFSATMPKELV------LKREHTYIDTVGLGSVETPVKIKQS-C 606
I D LP R RQ+L+FSAT+P+E++ +K +I TV V T +++ Q
Sbjct: 268 IKDLLPDPSVRDRQTLMFSATVPREVMGMVRKSMKPGFHFIKTVDENDVPTHLRVPQKMV 327
Query: 607 LVAPHELHFQILHHLLKEHI-LGTPD-----YKVIVFCSTGMVTSLL-----YLLLREMK 655
+ E + + +LK+++ D K IV+ +T + L LL M+
Sbjct: 328 FLRGFENGYPAIVEILKKYMDQAAADSTMRPMKAIVYFNTTVEVQLANEAFGALLTDPMQ 387
Query: 656 M--------NVREMYSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVG 707
+ ++S+ Q R S+ FR + IL++SDV+ARG+D+PDVT V+Q+G
Sbjct: 388 RRSGNPLGRKIYHIHSKLSQSQRTHYSDSFRRADSGILISSDVTARGLDFPDVTHVIQIG 447
Query: 708 IPPDREQYIHRLGRTGREGKEGEGVLLLAPWEE-YFLDDLKDLPL-----------DKLQ 755
IP +RE YIHRLGRTGR GKEG+G +L+ EE YF++ L DLP+ D
Sbjct: 448 IPRNRESYIHRLGRTGRAGKEGQGWVLIHDEEEKYFVEQLGDLPIKQDNSIDTANADMSN 507
Query: 756 LPHLNPEIQLQMDNHMAK---IDNNVKEAAYHAWLGYYNSIREIGRDKTTLVELANKFAQ 812
L L+ + ++ A + VKE AY L ++ R K LV N A+
Sbjct: 508 LESLSGPVAETINQVAAALKLVPYEVKEDAYRIQLS--ANVHTFPR-KRALVSALNDLAK 564
Query: 813 S-IGLQRPPPLFRKTALKMGLKDIPGIRL 840
+ GL PP + A K+G + +PG+RL
Sbjct: 565 NGWGLPEPPAISPSFASKLGFERVPGLRL 593
>gi|320038838|gb|EFW20773.1| conserved hypothetical protein [Coccidioides posadasii str.
Silveira]
Length = 722
Score = 236 bits (601), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 171/503 (33%), Positives = 259/503 (51%), Gaps = 65/503 (12%)
Query: 391 IKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTT 450
+ A+ G MT +Q T++ L GKD + +AKTGTGK++AFL+P I+ +++ S T
Sbjct: 96 VDAILKMGITDMTEIQAQTINHTLNGKDVLAQAKTGTGKTLAFLVPVIQKIIRDDPSLRT 155
Query: 451 ------QLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLE 504
+ I +++ PTRELA QIA EA + + G+ V T VGGTR RR++
Sbjct: 156 GQKFRQRGGSNIRAVVISPTRELAEQIAEEAQKIAR-FTGVQVRTAVGGTRKIEGLRRIQ 214
Query: 505 SDPCQILVATPGRLLDHIEN-KSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLP 563
+ C +LV TPGRL+D + +SG++ LK VLDEAD LLD GF + ++ P
Sbjct: 215 REGCHLLVGTPGRLIDIFSDPRSGIAA--PNLKAFVLDEADRLLDDGFAPSIMDLQTYFP 272
Query: 564 RR----RQSLLFSATMPKELV------LKREHTYIDTVGLGSVETPVKIKQ-----SCLV 608
+R RQ+L+FSAT+ E++ LK++ +++ TV T +K+ Q C
Sbjct: 273 KRSEVDRQTLMFSATIAPEILSMVRRTLKQDFSFVKTVRDDEAPTHLKVPQRAVFLDCRS 332
Query: 609 APHELHFQILHHLLKEH----ILGTPDYKVIVFCSTGMVT---SLLYLLLREMK------ 655
+IL ++ H + +P ++ + ST V+ + LL + +
Sbjct: 333 NQMPAIMEILTQAIRRHETDPVQNSPFKAIVYYNSTNEVSIAAAAFNALLTDPESRFSPH 392
Query: 656 -MNVR--EMYSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDR 712
+R E++S+ Q R R S+ FR +K IL +SDV+ARGMD+P+VT V+QVG+P R
Sbjct: 393 PFGIRGIEIHSKLTQAQRTRNSDMFRRAKSAILFSSDVTARGMDFPNVTHVIQVGVPQSR 452
Query: 713 EQYIHRLGRTGREGKEGEG-VLLLAPWEEYFLDDLKDLPLDK---------LQLPHLNPE 762
E YIHRLGRT R K GEG +LL P F L+ LP+ + + + NP+
Sbjct: 453 ETYIHRLGRTARANKTGEGWILLTDPEYREFKTTLRGLPIQEDEALLKTAMIDMSRENPD 512
Query: 763 -------IQLQMDNHMAKIDNNVKEAAYHAWLGYYNSIREIGRDKTTLVELANKFAQSIG 815
I Q + +D +KE AY + LG S RD+ +L N
Sbjct: 513 APEPTASIISQAKQAYSGLDYTLKEKAYMSSLGLIRS-----RDQ--FRQLNNMTKHLWS 565
Query: 816 LQRPPPLFRKTALKMGLKDIPGI 838
L PPP+ A ++ ++ PGI
Sbjct: 566 LDSPPPISLALARRLNIRHYPGI 588
>gi|443919972|gb|ELU39993.1| RNA helicase [Rhizoctonia solani AG-1 IA]
Length = 1241
Score = 236 bits (601), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 171/442 (38%), Positives = 232/442 (52%), Gaps = 66/442 (14%)
Query: 386 ISPLTIKALTAAGYI--QMTRVQEATLSAC-----------------LEGKDAVVKAKTG 426
ISP T +A+T Y MT VQ A L L +D +V+AKTG
Sbjct: 91 ISPETYEAITYKPYKLKNMTPVQAAVLKLLPQLAPHHTELQAGPDGRLPPRDLMVRAKTG 150
Query: 427 TGKSIAFLLPAIEAVLKATSSSTTQLVP-------PIY--------------VLILCPTR 465
TGK++AFL+PAIEA L A + Q + +Y LI+ PTR
Sbjct: 151 TGKTLAFLIPAIEARLAAIERAKKQALEKAGLTRDSMYENRAVRAFTRTDAGALIISPTR 210
Query: 466 ELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENK 525
ELA+QIA EA+ L +HDG V VGG + R I+VATPGRL D ++++
Sbjct: 211 ELATQIANEALKLTHHHDGFEVRLFVGGNSKREQMRGWLRGRRDIVVATPGRLRDLLQSE 270
Query: 526 SGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPR--RRQSLLFSATMPKEL---- 579
+ L ML+LDEAD LLD+GFR D+E+I+ LP+ RQ++L+SAT+ + +
Sbjct: 271 PSIPEGLKNTPMLILDEADTLLDMGFRDDLEDIISYLPKSPERQTMLYSATVSRAIQQVA 330
Query: 580 --VLKREHTYIDTVGLGSVETPV--KIKQSCLVAP--HELHFQILHHLLKEHILGTPDYK 633
L R H +I+TV E+PV I Q V P + IL L + + K
Sbjct: 331 RSTLDRNHEFINTV--QEEESPVHAHIPQYHTVLPRAEDQVPHILRLLAHDQLTNPGKSK 388
Query: 634 VIVFCSTGMVTSLLYLLLREM---------KMNVREMYSRKPQLYRDRISEEFR--ASKR 682
++F T +T + LLRE+ + + E++SRK Q R R S+ FR S
Sbjct: 389 SVIFLPTTKMTQMYASLLRELARDTLPAGRETQIYEIHSRKDQDSRSRTSDRFRKDTSGA 448
Query: 683 LILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLAPWEEYF 742
ILVTSDVSARG+DYP VT V+QVGIP +QYIHR+GRTGR G EG G L+L PWE F
Sbjct: 449 SILVTSDVSARGVDYPGVTRVIQVGIPSSSDQYIHRVGRTGRAGTEGRGDLVLLPWEIGF 508
Query: 743 LD-DLKDLPLDKLQLPHLNPEI 763
+ L +P+ + + E+
Sbjct: 509 VTWQLTHVPMKPTTVKQVEAEV 530
>gi|452001177|gb|EMD93637.1| hypothetical protein COCHEDRAFT_1192932 [Cochliobolus
heterostrophus C5]
Length = 690
Score = 236 bits (601), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 184/507 (36%), Positives = 286/507 (56%), Gaps = 55/507 (10%)
Query: 366 KKEKREEEPILSQKRFDECG-ISPLTIKALTAAGYIQ-MTRVQEATLSACLEGKDAVVKA 423
++ +++ EP+ + G + P I +T ++ MT VQ T++ L G D + +A
Sbjct: 67 EQSEQQNEPVTEFQDLATRGLVHPNIINTITKQMKLKTMTDVQSRTINEALSGVDIIAQA 126
Query: 424 KTGTGKSIAFLLPAIEAVLKATSSSTTQL-----VPP--IYVLILCPTRELASQIAAEAI 476
KTGTGK++ FL+P I+ +++ ++ P I +++ PTRELA QIA EA
Sbjct: 127 KTGTGKTLGFLIPIIQRIIQNDPKLGEKVKGYKRARPDDIRAIVISPTRELAEQIAVEAK 186
Query: 477 ALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENK-SGLSVRLMGL 535
++ N GI V VGGT+ K ++ + + C +++ATPGRL D + ++ SG++ L
Sbjct: 187 KVVSN-TGIVVQVAVGGTQKKAMLQKTQREGCHLMIATPGRLYDILSDEYSGIAAPR--L 243
Query: 536 KMLVLDEADHLLDLGFRKDVENIVDCLPR----RRQSLLFSATMPKELV-LKREHT---- 586
LV+DEAD LLD GF+K++++I LP RQ+L+FSAT+P+++V L RE
Sbjct: 244 NALVMDEADRLLDDGFQKEIDDIKTLLPDPKEVERQNLMFSATIPRDVVNLVRETMRPGF 303
Query: 587 -YIDTVGLGSVETPVKIKQS-CLVAPHELHFQILHHL-LKEHI----LGTPDYKVIV-FC 638
+ V T +I Q +VA E + L+ L L++H G+ +K IV F
Sbjct: 304 HFAKCVNEDEEPTHERIPQKMVMVAGFENNIPALYELVLQQHQKAQESGSRPFKAIVYFN 363
Query: 639 STGMVT---SLLYLLLREMKMN-----VR--EMYSRKPQLYRDRISEEFRASKRLILVTS 688
ST VT S+ Y L K N +R E++S+ Q R R +++FR +K IL +S
Sbjct: 364 STAEVTLASSVFYKLSGGFKRNNPLSGLRGFEIHSKLSQAQRTRAADDFRFAKSGILFSS 423
Query: 689 DVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLAPWEEYFLD-DLK 747
DV+ARGMD+PDVT V+Q+G+P +RE YIHRLGRTGR GKEGEG L+L+P+E + L+
Sbjct: 424 DVTARGMDFPDVTHVIQMGLPRERESYIHRLGRTGRAGKEGEGWLILSPFERQEVHRRLR 483
Query: 748 DLPL----DKLQLPHLNPEIQLQMDNHMAKIDNNVKEA---AY-----HAWLGYYNSIRE 795
LPL +L+ ++ ++ ++AKI ++ EA Y A+ G + +
Sbjct: 484 HLPLVNATHELETATVDMSQPTEVPENVAKILSDCVEAHKKVYPDQLDAAFRGLFGGFQW 543
Query: 796 IGRDKTTLVELANKFAQ-SIGLQRPPP 821
G DK L+E AN+ A+ G++ PPP
Sbjct: 544 YG-DKQGLIEGANRLAEFGWGMETPPP 569
>gi|303317664|ref|XP_003068834.1| ATP-dependent RNA helicase mss116, mitochondrial precursor,
putative [Coccidioides posadasii C735 delta SOWgp]
gi|240108515|gb|EER26689.1| ATP-dependent RNA helicase mss116, mitochondrial precursor,
putative [Coccidioides posadasii C735 delta SOWgp]
Length = 722
Score = 235 bits (600), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 171/503 (33%), Positives = 259/503 (51%), Gaps = 65/503 (12%)
Query: 391 IKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTT 450
+ A+ G MT +Q T++ L GKD + +AKTGTGK++AFL+P I+ +++ S T
Sbjct: 96 VDAILKMGITDMTEIQAQTINHTLNGKDVLAQAKTGTGKTLAFLVPVIQKIIRDDPSLRT 155
Query: 451 ------QLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLE 504
+ I +++ PTRELA QIA EA + + G+ V T VGGTR RR++
Sbjct: 156 GQKFRQRGGSNIRAVVISPTRELAEQIAEEAQKIAR-FTGVQVRTAVGGTRKIEGLRRIQ 214
Query: 505 SDPCQILVATPGRLLDHIEN-KSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLP 563
+ C +LV TPGRL+D + +SG++ LK VLDEAD LLD GF + ++ P
Sbjct: 215 REGCHLLVGTPGRLIDIFSDPRSGIAA--PNLKAFVLDEADRLLDDGFAPSIMDLQTYFP 272
Query: 564 RR----RQSLLFSATMPKELV------LKREHTYIDTVGLGSVETPVKIKQ-----SCLV 608
+R RQ+L+FSAT+ E++ LK++ +++ TV T +K+ Q C
Sbjct: 273 KRSEVDRQTLMFSATIAPEILSMVRRTLKQDFSFVKTVRDDEAPTHLKVPQRAVFLDCRS 332
Query: 609 APHELHFQILHHLLKEH----ILGTPDYKVIVFCSTGMVT---SLLYLLLREMK------ 655
+IL ++ H + +P ++ + ST V+ + LL + +
Sbjct: 333 NQMPAIMEILTQAIRRHETDPVQNSPFKAIVYYNSTNEVSIAAAAFNALLTDPESRFSPH 392
Query: 656 -MNVR--EMYSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDR 712
+R E++S+ Q R R S+ FR +K IL +SDV+ARGMD+P+VT V+QVG+P R
Sbjct: 393 PFGIRGIEIHSKLTQAQRTRNSDMFRRAKSAILFSSDVTARGMDFPNVTHVIQVGVPQSR 452
Query: 713 EQYIHRLGRTGREGKEGEG-VLLLAPWEEYFLDDLKDLPLDK---------LQLPHLNPE 762
E YIHRLGRT R K GEG +LL P F L+ LP+ + + + NP+
Sbjct: 453 ETYIHRLGRTARANKTGEGWILLTDPEYREFKTTLRGLPIQEDEALLKTAMIDMSRENPD 512
Query: 763 -------IQLQMDNHMAKIDNNVKEAAYHAWLGYYNSIREIGRDKTTLVELANKFAQSIG 815
I Q + +D +KE AY + LG S RD+ +L N
Sbjct: 513 APEPTASIISQAKQAYSGLDYTLKEKAYMSSLGLIRS-----RDQ--FRQLNNMTKHLWS 565
Query: 816 LQRPPPLFRKTALKMGLKDIPGI 838
L PPP+ A ++ ++ PGI
Sbjct: 566 LDSPPPISLALARRLNIRHYPGI 588
>gi|221060793|ref|XP_002261966.1| DEAD box helicase [Plasmodium knowlesi strain H]
gi|193811116|emb|CAQ41844.1| DEAD box helicase, putative [Plasmodium knowlesi strain H]
Length = 622
Score = 235 bits (600), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 161/472 (34%), Positives = 250/472 (52%), Gaps = 37/472 (7%)
Query: 394 LTAAGYIQMTRVQEATLSACLEGK---DAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTT 450
L Y + T VQ+ + K D +V+AKTGTGK+I++LL AI + + S
Sbjct: 158 LEVFKYKKFTDVQKIIYENVIREKKTNDLLVQAKTGTGKTISYLLLAINDIERNKIMS-- 215
Query: 451 QLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQI 510
++ LI+ PTRELA+QI EA LL + I VLTL+GG + + DQ L I
Sbjct: 216 -----VHTLIIVPTRELANQIYNEAKMLLTFKNNINVLTLIGGIKRREDQINLRRIKPDI 270
Query: 511 LVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQSLL 570
++ T GRLLDH E + LKML++DEAD LL LG+ D+ I+ LP++R++LL
Sbjct: 271 VICTVGRLLDHFECTYLFNTLFDNLKMLIIDEADQLLSLGYENDINRILTYLPKKRRNLL 330
Query: 571 FSATMPKEL------VLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILHHLLKE 624
FSAT+ L + K ++ +++ V S T ++KQ + IL++LL E
Sbjct: 331 FSATLNHNLDDIRQKMCKPDYMFLNCVKDPSKHTNEQLKQYVIFHKAVDTTVILYNLLME 390
Query: 625 HI-LGTPDYKVIVFCSTGMVTSLLYLLLR-EMKMNVREMYSRKPQLYRDRISEEFRASKR 682
H+ L YK++VF T T + ++K++V E++ +K R + F
Sbjct: 391 HMRLNQFTYKILVFFPTARATCFYANFFKTQLKISVYEIHRKKEPAQRQITANRFAVESV 450
Query: 683 LILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLAPWEEYF 742
IL TSD+S+RG++YPDVT ++QV REQYIHR+GRT R K+G +LLL +E F
Sbjct: 451 GILFTSDISSRGINYPDVTLIIQVNCAISREQYIHRVGRTARSNKDGTAILLLNEADELF 510
Query: 743 LDDLKDLPLDKLQLPHLNPEIQL----QMDNHMAKIDNNVKEAAYHAWLGYYNSIREIGR 798
+KDL +Q+ LNP L + N++ +N + Y A+ YY+S+ +
Sbjct: 511 YQQIKDL---NIQI--LNPNDYLLKNVNVSNYLNSWMSNT-QLLYLAY-AYYSSLLRFYK 563
Query: 799 DKTT--------LVELANKFAQSIGLQRPPPLFRKTALKMGLKDIPGIRLRK 842
K ++++ N S GL P + K A+ + +++ +++RK
Sbjct: 564 TKYATLKLSDDEIIDVVNNALLSTGLVEQPHISSKLAIMLNMQNNTRLKIRK 615
>gi|451855009|gb|EMD68301.1| hypothetical protein COCSADRAFT_133875 [Cochliobolus sativus
ND90Pr]
Length = 697
Score = 235 bits (599), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 170/469 (36%), Positives = 265/469 (56%), Gaps = 53/469 (11%)
Query: 402 MTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLK-----ATSSSTTQLVPP- 455
MT VQ T++ L G D + +AKTGTGK++ FL+P I+ +++ + + P
Sbjct: 105 MTDVQSRTINEALSGVDIIAQAKTGTGKTLGFLIPVIQRIIQNDPKLGEKAKGYKRAKPD 164
Query: 456 -IYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILVAT 514
I +++ PTRELA QIA EA ++ GI V VGGT+ + + + + C +++AT
Sbjct: 165 DIRAIVISPTRELAEQIAVEAKKVVSG-TGIVVQVAVGGTQKRAMLLKTQREGCHLMIAT 223
Query: 515 PGRLLDHIENK-SGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPR----RRQSL 569
PGRL D + ++ SG++ L LV+DEAD LLD GF+K++++I LP RQ+L
Sbjct: 224 PGRLYDILSDEYSGIAAPR--LNALVMDEADRLLDDGFQKEIDDIKTLLPDPAEVERQNL 281
Query: 570 LFSATMPKELV------LKREHTYIDTVGLGSVETPVKIKQS-CLVAPHELHFQILHHL- 621
+FSAT+P+++V ++ + V T ++ Q +VA E + L+ L
Sbjct: 282 MFSATIPRDVVNLVRQTMRPGFHFAKCVSEDEEPTHERVPQKMVMVAGFENNIPALYELV 341
Query: 622 LKEHIL-----GTPDYKVIVFCSTGMVT---SLLYLLLREMKMNVR-------EMYSRKP 666
LKEH G P +I F ST VT S+ Y L K N E++S+
Sbjct: 342 LKEHQKFQANGGRPFKAIIYFNSTAEVTLASSVFYKLSGGFKRNTPLSGLRGFEIHSKLS 401
Query: 667 QLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREG 726
Q R R +++FR +K IL +SDV+ARGMD+P+VT V+Q+G+P +R+ YIHRLGRTGR G
Sbjct: 402 QAQRTRAADDFRFAKSGILFSSDVTARGMDFPEVTHVIQMGLPRERDSYIHRLGRTGRAG 461
Query: 727 KEGEGVLLLAPWEEYFL-DDLKDLPL----DKLQLPHLNPEIQLQMDNHMAKIDNNVKEA 781
KEGEG ++L P+E+ + L+DLPL +L+ ++ +++ ++ KI ++ EA
Sbjct: 462 KEGEGWIILTPFEKQEVRRRLRDLPLVDATHELETATIDMSQPVEVPENVGKILSDCVEA 521
Query: 782 ---AY-----HAWLGYYNSIREIGRDKTTLVELANKFAQ-SIGLQRPPP 821
Y A+ G + S + G DK +L+E AN+ A+ G++ PPP
Sbjct: 522 HKKVYPDHLDAAFRGLFGSYQWYG-DKRSLIEGANRLAEFGWGMETPPP 569
>gi|449543818|gb|EMD34793.1| hypothetical protein CERSUDRAFT_116979 [Ceriporiopsis subvermispora
B]
Length = 790
Score = 235 bits (599), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 173/477 (36%), Positives = 245/477 (51%), Gaps = 69/477 (14%)
Query: 386 ISPLTIKALTA--AGYIQMTRVQEATLSACLE----------------GKDAVVKAKTGT 427
+S TIKA+T MT VQ A L + +D +VKA+TGT
Sbjct: 94 VSYETIKAITVRPMKLTNMTSVQSAVLPLMPQLTAPYNPEPEDGSKPLARDLLVKARTGT 153
Query: 428 GKSIAFLLPAIEAVLKATSSSTTQLV---------------------PPIYVLILCPTRE 466
GK++AFL+P IEA LKA Q V + LI+ PTRE
Sbjct: 154 GKTLAFLVPVIEARLKAIKEHGKQAVKDAGLVTDKHLESRAQRIFAKTEVGALIISPTRE 213
Query: 467 LASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKS 526
LA+QIA +AI L +HDG V LVGG R I+VATPGRL D ++ +
Sbjct: 214 LATQIANDAIRLTHHHDGFEVRLLVGGNSKGKQVRDWVKGRRDIVVATPGRLRDMLQTEP 273
Query: 527 GLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRR--RQSLLFSATMPKEL----- 579
+ + K L+LDEAD LL++GFR D++ I LP RQ+ LFSAT+ + +
Sbjct: 274 EIKAGIAKTKTLILDEADTLLEMGFRDDIDAIKSYLPPTPVRQTFLFSATVSRAIQQVAR 333
Query: 580 -VLKREHTYIDTVGLGSVETPVKIKQSCLVAPH---ELHFQILHHLLKEHILGTPDYKVI 635
L + H +I+ V + T I Q V P+ ++ + IL+ L + + KVI
Sbjct: 334 ATLDKNHLFINCVSDDAPPTHAHIPQYHTVLPNASSQMPY-ILNLLAHDQLTNPGASKVI 392
Query: 636 VFCSTGMVTSLLYLLLREMKMN--------VREMYSRKPQLYRDRISEEFRASKR--LIL 685
VF T +T L LL ++K V EM+S K Q RD SE FR K +L
Sbjct: 393 VFMPTTKMTQLYSTLLMQLKSTLPAGNQTMVYEMHSNKAQHQRDTTSERFRNDKSGACVL 452
Query: 686 VTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGR-EGKEGEGVLLLAPWEEYFLD 744
V+SDVSARG+DYP VT V+Q+GIP + +QY+HR+GRTGR K G L+L PWE F+
Sbjct: 453 VSSDVSARGVDYPGVTRVIQIGIPANSDQYVHRVGRTGRGASKSGRADLVLLPWEIGFVT 512
Query: 745 -DLKDLPLDKLQLPHLNPEIQLQMDNHMAKIDNNVKEAAYHAWLGYYNSIREIGRDK 800
L D+PL L + E+ Q++ + K+D++ K ++ + + N ++GR++
Sbjct: 513 WQLTDMPLKPLTV----KELYGQVNELVEKLDSDPK--SFFKGVAFPNPYDKLGRER 563
>gi|156102621|ref|XP_001617003.1| RNA helicase [Plasmodium vivax Sal-1]
gi|148805877|gb|EDL47276.1| RNA helicase, putative [Plasmodium vivax]
Length = 601
Score = 235 bits (599), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 153/463 (33%), Positives = 246/463 (53%), Gaps = 29/463 (6%)
Query: 399 YIQMTRVQEATLSACLEGK---DAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLVPP 455
Y Q T VQ+ + K D +V+AKTGTGK+I++LL AI + + +
Sbjct: 142 YKQFTDVQKIIYENVMREKKTNDLLVQAKTGTGKTISYLLLAINDIER-------NRIMS 194
Query: 456 IYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILVATP 515
++ LI+ PTRELA+QI EA LL + I VLTL+GG + + DQ L I++ T
Sbjct: 195 VHTLIIVPTRELANQIYNEAKLLLTFKNNINVLTLIGGIKRREDQINLRRIKPDIVICTV 254
Query: 516 GRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQSLLFSATM 575
GRLLDH E + LKML++DEAD LL LG+ D+ I+ LP+ R++ LFSAT+
Sbjct: 255 GRLLDHFECTYLFNTLFDNLKMLIIDEADQLLSLGYENDINRILTYLPKNRRNFLFSATL 314
Query: 576 PKEL------VLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILHHLLKEHI-LG 628
+ + K ++ +++ V S T ++KQ + IL++LL EH+ L
Sbjct: 315 SHNIEEIRQKMCKPDYIFLNCVKDPSKHTNEQLKQYVIFHKAVDTTVILYNLLMEHMRLN 374
Query: 629 TPDYKVIVFCSTGMVTSLLYLLLR-EMKMNVREMYSRKPQLYRDRISEEFRASKRLILVT 687
YK++VF T T + ++K++ E++ +K R + F IL T
Sbjct: 375 QFTYKILVFFPTARATCFYANFFKTQLKISTYEIHRKKEPAQRQITANRFAVESVGILFT 434
Query: 688 SDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLAPWEEYFLDDLK 747
SD+S+RG++YPDVT ++QV REQYIHR+GRT R K+G G++LL +E F +K
Sbjct: 435 SDISSRGINYPDVTLIIQVNCAISREQYIHRVGRTARSNKKGTGIILLNEADELFYQQIK 494
Query: 748 DLPLDKLQLPHLNPEIQLQMDNHMAKIDNNVKEAAYHAWLGYYNSIREIGRDKTT----- 802
DL ++ L + + + N+++ +N + Y A+ YY+S+ + K
Sbjct: 495 DLNIEVLNASDYLLK-NVNVSNYLSSWMSNT-QLLYLAY-AYYSSLLRFYKTKFATLKLS 551
Query: 803 ---LVELANKFAQSIGLQRPPPLFRKTALKMGLKDIPGIRLRK 842
++++ N S GL P + K A+ + +++ +++RK
Sbjct: 552 DDEIIDVVNNALLSTGLVEQPHISSKLAITLNMQNNARLKIRK 594
>gi|403168733|ref|XP_003328336.2| hypothetical protein PGTG_09630 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375167637|gb|EFP83917.2| hypothetical protein PGTG_09630 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 820
Score = 235 bits (599), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 165/474 (34%), Positives = 245/474 (51%), Gaps = 60/474 (12%)
Query: 365 EKKEKREEEPILSQKRFDECGISPLTIKALTAA--GYIQMTRVQEATLS------ACLEG 416
E+ E+ E+P E ISP +A+T + GY M+ VQ+ LS EG
Sbjct: 92 EEIEEDSEKPTTQPFSSIESYISPALYRAVTQSPFGYSHMSAVQDQLLSDLPNLIQATEG 151
Query: 417 -----KDAVVKAKTGTGKSIAFLLPAIEAVLK---------------ATSSSTTQLV--- 453
KD +VKAKTGTGK++AFL+PAIE+ L+ AT + Q +
Sbjct: 152 GQSRTKDLLVKAKTGTGKTLAFLIPAIESRLRDLEAEQARFKSQNPDATHQNLIQHMRRY 211
Query: 454 --PPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQIL 511
++++ PTRELA+QIA EAI L + G+ VGG R E I+
Sbjct: 212 EAETTGIVVMSPTRELATQIAQEAIKLTSHLKQFGIRLFVGGASKAAQLREFERGRRDIV 271
Query: 512 VATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRR--RQSL 569
VATPGRL D + + L K L++DEAD LL++GF+++++ IV LP + R +
Sbjct: 272 VATPGRLNDVLNTSPAVRQNLATAKTLIMDEADTLLEMGFKEEIDEIVKQLPPKEERSTY 331
Query: 570 LFSATMPKEL------VLKREHTYIDTVGLGSVETPVKIKQSCLVAPH-ELHFQILHHLL 622
LFSAT+ E+ +K++ +D V G + Q V P+ + + + +LL
Sbjct: 332 LFSATISPEINRIAQQTMKKDTKIVDCVPTGETNVHAHVPQYFTVLPNPDQQVKHIFNLL 391
Query: 623 KEHILGTPDYKVIVFCSTGMVTSLLYLLL----REMKMN------VREMYSRKPQLYRDR 672
L P K ++F T +T L ++ R + N V EM+ + Q R+
Sbjct: 392 AHDQLTNPSGKTVIFLPTTKMTQLFSQMISNFRRHLPWNSTGLTKVYEMHGGRTQREREN 451
Query: 673 ISEEFRASK---RLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEG 729
I+++FRA +LVTSDVSARG+DYP VT V+Q+G+P R+ Y+HR+GRTGR GK G
Sbjct: 452 IAKDFRAGSGGGYQVLVTSDVSARGVDYPGVTRVIQIGVPTSRDIYVHRVGRTGRAGKSG 511
Query: 730 EGVLLLAPWEE-YFLDDLKDLPLDKLQLPHLNPEIQLQMDNHMAKIDNNVKEAA 782
G L+L P+E Y L+++P+ L + L E + ++KID +E A
Sbjct: 512 RGDLILLPFEAGYVPSTLREIPIKPLSVSGLKDE----LTEMISKIDEAGQEQA 561
>gi|406866669|gb|EKD19708.1| putative ATP-dependent RNA helicase [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 711
Score = 234 bits (598), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 176/511 (34%), Positives = 252/511 (49%), Gaps = 68/511 (13%)
Query: 391 IKALT-AAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSST 449
++A+T G+ MT VQ T++ L G D V +A+TGTGK++ FL+P I+ +L+ +
Sbjct: 105 VEAITKGMGHQTMTEVQAMTINQALSGSDIVAQARTGTGKTLGFLVPTIQNILRQSPELA 164
Query: 450 TQ------LVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRL 503
T+ I +I+ PTRELA QIA EA L N D + V VGG + ++
Sbjct: 165 TRKQYSRARASDIRAIIISPTRELAEQIAVEAEKLCGNTD-LRVQVAVGGNSKRSMLQKT 223
Query: 504 ESDPCQILVATPGRLLDHIE-NKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCL 562
+ C +LV TPGRL D +E N SG V+ L VLDEAD LLD GF KD+ I D L
Sbjct: 224 LREGCHLLVGTPGRLQDLLEDNYSG--VKAPNLTTFVLDEADRLLDDGFSKDIRAIQDLL 281
Query: 563 PRR----RQSLLFSATMPKELV------LKREHTYIDTVGLGSVETPVKIKQSCLVAPH- 611
P R RQ+LLFSATMP+E++ LK ++ V G + T K+ Q ++ P
Sbjct: 282 PDRKVVDRQTLLFSATMPREVMHLVRSTLKPGFHFVQAVKEGDLATHEKVPQHIVITPGI 341
Query: 612 ELHFQILHHLLKE--------HILG--TPDYKVIVFCSTGMVTSLLYLLLREMK------ 655
E H L L K H G +K IV+ + L + + +K
Sbjct: 342 ENHMPALLELAKREIEKAARAHTAGEEVRPFKAIVYFQSTANVILASDIFQNLKSTNSPG 401
Query: 656 -----------MNVREMYSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVV 704
+ EM+ + Q R +SE FR +K IL ++DV+ARGMD+P+VT VV
Sbjct: 402 QGMFGKHPLYPAQISEMHGQLSQQARTYVSERFRRAKSAILFSTDVTARGMDFPNVTHVV 461
Query: 705 QVGIPPDREQYIHRLGRTGREGKEGEGVLLLAPWE-EYFLDDLKDLPL--DK-------- 753
Q+G+PP+REQYIHR+GRTGR K G+G++ L + L+ LP+ DK
Sbjct: 462 QIGLPPNREQYIHRIGRTGRGDKTGDGLIFLNEASVQVARRMLRGLPIIPDKSLQSAEID 521
Query: 754 ----LQLPHLNPEIQLQMDNHMAKIDNNVKEAAYHAWLGYYNSIREIGRDKTTLVELANK 809
Q+P E Q+ + + + KE AY LG + I + L
Sbjct: 522 MTKDAQVPQSVAETLSQVGDAIKMVSRRTKEDAYMGALGSLGGVNPI----EGAMALNRW 577
Query: 810 FAQSIGLQRPPPLFRKTALKMGLKDIPGIRL 840
G + PP + A K+G+ I G+ +
Sbjct: 578 TRYGWGFEEPPRVAPGLASKLGISRIEGMNV 608
>gi|440634484|gb|ELR04403.1| hypothetical protein GMDG_01479 [Geomyces destructans 20631-21]
Length = 692
Score = 234 bits (598), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 174/520 (33%), Positives = 257/520 (49%), Gaps = 65/520 (12%)
Query: 378 QKRFDECGISPLTIKALT-AAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLP 436
Q+ D + P IK +T G+ MT VQ+ T++ L+G D + +A+TGTGK++ FL+P
Sbjct: 87 QELADRGHVHPAIIKEITDTMGHDTMTDVQQLTIAETLKGTDVIAQARTGTGKTLGFLIP 146
Query: 437 AIEAVLKATSSSTTQ-----------LVPPIYVLILCPTRELASQIAAEAIALLKNHDGI 485
++ +LK + Q I +++ PTRELA Q+A EA L + + I
Sbjct: 147 VLQNILKTSPELADQGQDQSMRGSRSTASDIRAIVMSPTRELAEQLAVEAQKLCRGTN-I 205
Query: 486 GVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADH 545
V VGG+ K +++ C +LVATPGRL D + + V LK +VLDEAD
Sbjct: 206 KVQVAVGGSNKKAMLNQMQRQGCHLLVATPGRLHDLLTDPYS-RVSAPNLKAVVLDEADR 264
Query: 546 LLDLGFRKDVENIVDCLPRR----RQSLLFSATMPKELV------LKREHTYIDTVGLGS 595
LLD GF KD+E I++ LP R RQ+LLFSAT+P+E++ LK ++ TV
Sbjct: 265 LLDQGFSKDIEAIINLLPNRNITDRQTLLFSATVPREVMSLVRSTLKPGFQFVQTVKSDE 324
Query: 596 VETPVKIKQ---SCL----VAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLY 648
V T +I Q SC VAP + P +K IV+ + +L
Sbjct: 325 VPTHERIPQHVVSCKGFENVAPALVEICTKEIAKVAQDPTQPPFKAIVYLPSTANVTLYA 384
Query: 649 LLLREMKMNVREMYSRKP--------------QLYRDRISEEFRASKRLILVTSDVSARG 694
+L + + +Y P Q R R+S+ FR +K I+V+SDV+ARG
Sbjct: 385 GILGSLSQSDNALYGTHPLHPAEVSAMHGKLTQQQRTRVSDRFRRAKSAIMVSSDVTARG 444
Query: 695 MDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLAPWE----EYFLDDLKDLP 750
MD+P+VT V+Q+G+PP+R+QYIHR+GRTGR K G G L E L+ L P
Sbjct: 445 MDFPNVTHVIQIGVPPNRDQYIHRVGRTGRGDKGGVGYALFTDIEMNLARRILNGLPIKP 504
Query: 751 LDKLQLPHLNPEIQLQMDNHMAKIDNNVKE-----------AAYHAWLGYYNSIREIGRD 799
++ ++ Q+ A+I V E AA+ A LG SI D
Sbjct: 505 DTTIETSRIDMTKDAQLGADAAQILVQVGEATKRVSRFDKIAAFQAALGSLQSI----SD 560
Query: 800 KTTLVELANKFAQ-SIGLQRPPPLFRKTALKMGLKDIPGI 838
K L++ ++ + G PP + A K+GL + G+
Sbjct: 561 KQGLMDGLYQWTRYGWGFDSPPSIGHGLASKLGLSRVTGL 600
>gi|302423074|ref|XP_003009367.1| ATP-dependent RNA helicase mss116 [Verticillium albo-atrum
VaMs.102]
gi|261352513|gb|EEY14941.1| ATP-dependent RNA helicase mss116 [Verticillium albo-atrum
VaMs.102]
Length = 701
Score = 234 bits (598), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 182/520 (35%), Positives = 279/520 (53%), Gaps = 57/520 (10%)
Query: 371 EEEPILSQK--RFDEC---GISPLTIKALT-AAGYIQMTRVQEATLSACLEGKDAVVKAK 424
E+ P + K RFD+ G+ P +K +T GY M+ VQ T++ L+G D V +A+
Sbjct: 67 EQSPDANDKPTRFDDLPSLGVHPNLVKNITHGMGYESMSDVQTQTITPALKGTDLVAQAR 126
Query: 425 TGTGKSIAFLLPAIEAVLKATSSSTTQLV------PPIYVLILCPTRELASQIAAEAIAL 478
TGTGK++ FL+P ++ +L+ S T+ I ++L PTRELA QIA EA L
Sbjct: 127 TGTGKTLGFLIPVLQRMLQEDPSLATRSARYDARSDDIRGIVLSPTRELAEQIAVEAEKL 186
Query: 479 LKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIEN-KSGLSVRLMGLKM 537
+ G+ V VGGT+ RR + + C +LVATPGRL D +E+ +SG++ L
Sbjct: 187 TRG-TGLVVQRAVGGTQKSEMLRRCKREGCHLLVATPGRLNDLLEDPRSGIAA--PNLAA 243
Query: 538 LVLDEADHLLDLGFRKDVENIVDCLP----RRRQSLLFSATMPKELV-LKREHT------ 586
+VLDEAD +LD+GF+ +++ IVD LP + RQ+LLFSAT+PK++V L RE
Sbjct: 244 IVLDEADRMLDVGFKTELQEIVDKLPDVRDKPRQTLLFSATIPKDVVQLAREWVRPDNFD 303
Query: 587 YIDTVGLGSVETPVKIKQSCLVAPHELH-FQILHHLLKEHILG------TPDYKVIVFC- 638
+I TV G T ++KQ + + F L ++++ P +K +VF
Sbjct: 304 FIQTVSQGEALTHERVKQHLVPCRGWGNVFPALFEVIEKESANRRANPDLPPFKAMVFLP 363
Query: 639 STGMV---TSLLYLLLREMK--MNVREMYSRKPQLYRDRISEEFRASKRLILVTSDVSAR 693
ST MV R+ N+R ++S+ Q R R ++ FR IL +SDV+AR
Sbjct: 364 STAMVDLAADAFNAGFRQSTGLFNLR-IHSKLTQQGRTRAADRFRELNSGILFSSDVTAR 422
Query: 694 GMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLAPWE-EYFLDDLKDLPLD 752
GMD+P+VT V+Q G P DRE YIHR+GRT R+GKEGEG L+++ + +L LP++
Sbjct: 423 GMDFPNVTHVIQAGPPSDREHYIHRIGRTARQGKEGEGWLIISQTDIGTARHELGGLPIE 482
Query: 753 KLQLPHLNPEIQLQ-----------MDNHMAKIDNNVKEAAYHAWLGYYNSI-REIGRDK 800
+ ++ E+ L D M + + + ++ + + R+ RD+
Sbjct: 483 PNRT-IVSAEVDLTAATEDQERTPVFDTTMDALKRVPRSSLAATYMSLFARVTRQNVRDR 541
Query: 801 TTLVELANKFAQSIGLQRPPPLFRKTALKMGLKDIPGIRL 840
EL F IGL+ P + KTA K+GL+ + G+ +
Sbjct: 542 VE--ELKEWFVNGIGLENTPAMSPKTADKLGLRRVEGLNI 579
>gi|307103042|gb|EFN51307.1| hypothetical protein CHLNCDRAFT_28229 [Chlorella variabilis]
Length = 518
Score = 234 bits (597), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 167/471 (35%), Positives = 246/471 (52%), Gaps = 25/471 (5%)
Query: 364 GEKKEKREEEPILSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKA 423
E E ++ + + KRFDE IS + + L A Y +T VQ A L L G+D + A
Sbjct: 53 AEGGEAPQQPSVAAAKRFDELPISEYSKQGLREAKYFSLTAVQRAALPHALCGRDVLGAA 112
Query: 424 KTGTGKSIAFLLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHD 483
KTG+GK++AFLLP +E + +A S L L++ PTRELA QI E + + HD
Sbjct: 113 KTGSGKTLAFLLPVVEKLYRARWSKLDGL----GALVISPTRELALQIFDELRKVGRRHD 168
Query: 484 GIGVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEA 543
L L+GG K +Q R+ ILV TPGRLL H++ G L++LVLDEA
Sbjct: 169 FSAGL-LIGGKDVKEEQARVHG--MNILVCTPGRLLQHMDETPGFDAG--QLQVLVLDEA 223
Query: 544 DHLLDLGFRKDVENIVDCLPRRRQSLLFSATMPKEL-----VLKREHTYIDTVGLGSVET 598
D +LD+GF + IV +PR+RQ+LLFSAT K + + ++ YI + T
Sbjct: 224 DRILDMGFSATLNAIVANIPRQRQTLLFSATQTKSVKDLARLSLKDPEYISVHAEAAAPT 283
Query: 599 PVKIKQSCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNV 658
P++++Q+ +V IL +K H+ K IVF ST L+ R+++ V
Sbjct: 284 PLRLQQAYMVCELPQKLDILWSFIKTHL----KAKTIVFVSTCKQVRFLFEAFRKLRPGV 339
Query: 659 --REMYSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYI 716
R ++ + Q R + EF +K ++L +D++ARG+D+P + VVQ P D YI
Sbjct: 340 PLRALHGKMNQYKRMGVFYEFCEAKAMVLFATDIAARGLDFPTIDWVVQADCPEDVPAYI 399
Query: 717 HRLGRTGREGKEGEGVLLLAPWE-EYFLDDLKDLPLDKLQLPHLNPEIQLQMDNHMAKI- 774
HR+GRT R G+G+LLL P E E L L++ + QL H ++Q A +
Sbjct: 400 HRVGRTARYMSSGKGLLLLVPSEKEGMLAQLEEAKVPMKQLKHNPSKVQPVAPALQALLS 459
Query: 775 -DNNVKEAAYHAWLGYYNSI-REIGRDKTTLVEL-ANKFAQSIGLQRPPPL 822
D +KE A A + Y S+ + R + +L A +FA S+GL P L
Sbjct: 460 KDGELKEVAQRALVSYLRSVFLQPNRKVFDVTQLPAAEFAYSMGLPTAPKL 510
>gi|296822456|ref|XP_002850288.1| ATP-dependent RNA helicase mss116 [Arthroderma otae CBS 113480]
gi|238837842|gb|EEQ27504.1| ATP-dependent RNA helicase mss116 [Arthroderma otae CBS 113480]
Length = 644
Score = 234 bits (597), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 185/538 (34%), Positives = 268/538 (49%), Gaps = 73/538 (13%)
Query: 361 NGNGEKKEKREEEPILSQKRFDECGI-SPLTIKALT-AAGYIQMTRVQEATLSACLEGKD 418
N E ++ RE+E I E G+ I A+T G MT VQ T++ ++G D
Sbjct: 60 NAGIEAEDVREDELITEFAELGEKGVVDQRLIDAITKGMGLKTMTDVQVQTINESIQGTD 119
Query: 419 AVVKAKTGTGKSIAFLLPAIEAVLKATS-------SSTTQLVPPIYVLILCPTRELASQI 471
+ +AKTGTGK++AFLLP I +L+ + ++TQ I +++ PTRELA QI
Sbjct: 120 MIAQAKTGTGKTVAFLLPVIHRILQDPTLGNLRRKFASTQ---DIRAVVISPTRELAEQI 176
Query: 472 AAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIEN-KSGLSV 530
A EA + + G+ V T VGGTR + RL+ + C ILV TPGRL+D + SG+S
Sbjct: 177 AVEAQKITRG-SGLKVQTAVGGTRKREGLMRLQREGCHILVGTPGRLMDLFSDPTSGVSA 235
Query: 531 RLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRR----RQSLLFSATMPKEL------V 580
L+ VLDEAD LLD+GF D+E I P R RQ+L+FSAT+P + +
Sbjct: 236 --PKLQAFVLDEADRLLDIGFAPDIERIQSFFPSRSQVDRQTLMFSATIPNSVKGLAREM 293
Query: 581 LKREHTYIDTVGLGSVETPVKIK---QSCLVAPHELHFQILHHLLKEHI--------LGT 629
LK + T+I+TVG ETP +K ++ + E L + K +
Sbjct: 294 LKPDFTFINTVG---DETPTHLKVPQRAVFLRGFENQLPALFEIAKRAVQTHAANPETAM 350
Query: 630 PDYKVIVFCSTGMVT---SLLYLLLREM---------KMNVREMYSRKPQLYRDRISEEF 677
P V+ + ST V+ L R++ ++ EM+SR Q R S+ F
Sbjct: 351 PFKAVVYYGSTAEVSVARRAFNALCRDLESLYPGRSPRIQTIEMHSRLTQAQRTFNSDSF 410
Query: 678 RASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLAP 737
R + IL +SDV+ARGMD+P+V+ V+Q+G+P D++ YIHRLGRT R K GEG +L
Sbjct: 411 RRATTGILFSSDVTARGMDFPNVSHVIQMGVPNDKDTYIHRLGRTARADKTGEGWILFPD 470
Query: 738 WE-EYFLDDLKDLPL-----------DKLQLPHLNPEIQLQMDN---HMAKIDNNVKEAA 782
E + F D L+ LP+ D P L+ I L D +I++ K A
Sbjct: 471 IEFDTFGDKLRSLPIEEDASLDFASADLTNPPQLSESIALVYDTLSKQFTRINDEDKLKA 530
Query: 783 YHAWLGYYNSIREIGRDKTTLVELANKFAQSI-GLQRPPPLFRKTALKMGLKDIPGIR 839
Y A + DK L ++ A ++ G Q PP L + + G + G R
Sbjct: 531 YRAMNNQMSKY-----DKREARRLLHQLATTVWGYQEPPYLPEPSPSRFGGRSSRGQR 583
>gi|390599662|gb|EIN09058.1| DEAD-domain-containing protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 679
Score = 234 bits (597), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 156/393 (39%), Positives = 215/393 (54%), Gaps = 46/393 (11%)
Query: 417 KDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLVPPIYV------------------ 458
+D +VKAKTGTGK++AFL+PAI+A +KA S + V +
Sbjct: 51 RDLLVKAKTGTGKTLAFLVPAIDARIKAIEFSGKRAVREAGLETDKHLAGQARRKFSREH 110
Query: 459 ---LILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILVATP 515
LI+ PTRELA+QIA +AI L +HD GV GG+ R I++ATP
Sbjct: 111 AGALIISPTRELATQIANDAIKLSTHHDEFGVQLFTGGSSKGAQMRNWMRSRKDIVIATP 170
Query: 516 GRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLP--RRRQSLLFSA 573
GRL D ++++ ++ L ++ L+LDEAD LLD+GFR D++ I LP RQ+LLFSA
Sbjct: 171 GRLRDLLQSEPSVAQSLAKVQTLILDEADTLLDMGFRDDIDAITAQLPPTPERQTLLFSA 230
Query: 574 TMPKEL------VLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILH---HLLKE 624
T+ + + L ++H +ID VG I Q V P E QI H L ++
Sbjct: 231 TVSRAIRQVARSTLAKDHLFIDCVGEDDSGVHTHIPQYHTVLP-EASAQIPHVLRLLARD 289
Query: 625 HILGTPDYKVIVFCSTGMVTSLLYLLLREMKMN---------VREMYSRKPQLYRDRISE 675
+ K IVF T +T L LL+E+ + V E++S K Q R R S+
Sbjct: 290 QLANAGKSKAIVFLPTTKMTQLFATLLKELSKDALPAQNSTRVYEIHSGKGQEQRTRASD 349
Query: 676 EFRASKR--LILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGK-EGEGV 732
FR+ K +LVTSDVSARG+DYP VT V+QVGIP R+QY+HR+GRTGR +G G
Sbjct: 350 AFRSDKSGACVLVTSDVSARGVDYPGVTQVIQVGIPASRDQYVHRVGRTGRGSHVQGRGD 409
Query: 733 LLLAPWEEYFLD-DLKDLPLDKLQLPHLNPEIQ 764
L+L PWE F +L ++PL L L E++
Sbjct: 410 LVLLPWEGAFATYELNEVPLKPLTSAALEEEVR 442
>gi|302696485|ref|XP_003037921.1| hypothetical protein SCHCODRAFT_12650 [Schizophyllum commune H4-8]
gi|300111618|gb|EFJ03019.1| hypothetical protein SCHCODRAFT_12650 [Schizophyllum commune H4-8]
Length = 456
Score = 234 bits (597), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 166/458 (36%), Positives = 248/458 (54%), Gaps = 34/458 (7%)
Query: 408 ATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLVPPIYVLILCPTREL 467
A LS LEG D VV+AKTGTGK++AFL+P +E + + S+ LI+ PTR+L
Sbjct: 2 AGLSHSLEGHDLVVQAKTGTGKTLAFLIPIVEKLRQQESALPGDT---FAALIVTPTRDL 58
Query: 468 ASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIEN-KS 526
A QI E I LLK V T +GGT + R+ D C I+VATPGRL DH++N ++
Sbjct: 59 AIQIQNECIPLLKGSP-FRVGTAIGGTNMNTEANRILRDRCDIIVATPGRLNDHLQNNRA 117
Query: 527 GLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLP----RRRQSLLFSATMPKEL--- 579
G R L+ +V DEAD +LD GF+ +++I LP + RQ+L +SATM +
Sbjct: 118 GPKFR--KLQFVVYDEADRMLDAGFKPQLDSIRSYLPDPAIQPRQTLFYSATMDNSVKQI 175
Query: 580 ---VLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILHHLLKEHILGTPDY-KVI 635
L ++ I T+ T + Q+ + E + +L E I KV+
Sbjct: 176 IKATLSSKYKLISTIPENEQNTHKHVPQNVVEVRFEDSLPVALSILFEEIKNMQGLAKVM 235
Query: 636 VFCSTGMVTSLLYLLLREMKM--NVREMYSRKPQLYRDRISEEFRASKRLILVTSDVSAR 693
+F T T+ L+E+ V M+SR Q R R ++ F+ +K I+V+SDV+AR
Sbjct: 236 MFFPTANQTAWAAAALQEVAGLPQVWPMHSRLSQSTRTRTADAFKNTKTGIMVSSDVTAR 295
Query: 694 GMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLAPWEEYFLDDLKDLPLDK 753
GMD+P+V+ V+Q+G+P + YIHRLGRT R G G GV++L P E++FL + +++
Sbjct: 296 GMDFPNVSLVLQIGVPGTPQDYIHRLGRTARAGTSGRGVIILDPAEKFFLSN-REIAELP 354
Query: 754 LQLPHLNPEIQLQMDNH-----MAKIDNNVKEAAYHAWLGYYNSIREIGRDKTT---LVE 805
+ + QLQ +AK+ K AY AW+G+Y + +G+ + T LV+
Sbjct: 355 IAPAPPPADAQLQQTREVLRPAIAKVPKGHKGKAYRAWMGFYK--QYVGKMRWTPQGLVD 412
Query: 806 LANKFA-QSIGLQRP--PPLFRKTALKMGLKDIPGIRL 840
A F + +G P P L R+T KMGLK + G+ +
Sbjct: 413 RAAVFVYEGLGWPSPQLPTLRRQTVGKMGLKGVKGLNI 450
>gi|346970530|gb|EGY13982.1| ATP-dependent RNA helicase [Verticillium dahliae VdLs.17]
Length = 698
Score = 234 bits (596), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 182/520 (35%), Positives = 280/520 (53%), Gaps = 57/520 (10%)
Query: 371 EEEPILSQK--RFDEC---GISPLTIKALT-AAGYIQMTRVQEATLSACLEGKDAVVKAK 424
E+ P + K RFD+ G+ P +K +T GY M+ VQ T++ L+G D V +A+
Sbjct: 67 EQSPDANDKPTRFDDLPSLGVHPNLVKNITHGMGYESMSDVQTQTITPALKGTDLVAQAR 126
Query: 425 TGTGKSIAFLLPAIEAVLKATSSSTTQLV------PPIYVLILCPTRELASQIAAEAIAL 478
TGTGK++ FL+P ++ +L+ S T+ I ++L PTRELA QIA EA L
Sbjct: 127 TGTGKTLGFLIPVLQRMLQEDPSLATRSARYDARSDDIRGIVLSPTRELAEQIAVEAEKL 186
Query: 479 LKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIEN-KSGLSVRLMGLKM 537
+ G+ V VGGT+ RR + + C +LVATPGRL D +E+ +SG++ L
Sbjct: 187 TRG-TGLVVQRAVGGTQKSEMLRRCKREGCHLLVATPGRLNDLLEDPRSGIAA--PNLAA 243
Query: 538 LVLDEADHLLDLGFRKDVENIVDCLP----RRRQSLLFSATMPKELV-LKREHT------ 586
+VLDEAD +LD+GF+ +++ IVD LP + RQ+LLFSAT+PK++V L RE
Sbjct: 244 IVLDEADRMLDVGFKTELQEIVDKLPDVRDKPRQTLLFSATIPKDVVQLAREWVRPDNFD 303
Query: 587 YIDTVGLGSVETPVKIKQSCLVAPHELH-FQILHHLLKEHILG------TPDYKVIVFC- 638
+I TV G T ++KQ + + F L ++++ P +K +VF
Sbjct: 304 FIQTVSQGEALTHERVKQHLVPCRGWGNVFPALFEVIEKESANRRANPDLPPFKAMVFLP 363
Query: 639 STGMV---TSLLYLLLREMK--MNVREMYSRKPQLYRDRISEEFRASKRLILVTSDVSAR 693
ST MV R+ N+R ++S+ Q R R ++ FR IL +SDV+AR
Sbjct: 364 STAMVDLAADAFNAGFRQSTGLFNLR-IHSKLTQQGRTRAADRFRELSSGILFSSDVTAR 422
Query: 694 GMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLAPWE-EYFLDDLKDLPLD 752
GMD+P+VT V+Q G P DRE YIHR+GRT R+GKEGEG L+++ + +L LP++
Sbjct: 423 GMDFPNVTHVIQAGPPSDREHYIHRIGRTARQGKEGEGWLIISQTDIGTARHELGGLPIE 482
Query: 753 KLQLPHLNPEIQLQ-----------MDNHMAKIDNNVKEAAYHAWLGYYNSI-REIGRDK 800
+ ++ E+ L D M + + + ++ + + R+ RD+
Sbjct: 483 PNRT-IVSAEVDLTAATEDQDRTPVFDTTMDALKRVPRSSLAATYMSLFARVTRQNVRDR 541
Query: 801 TTLVELANKFAQSIGLQRPPPLFRKTALKMGLKDIPGIRL 840
+ EL F IGL+ P + KTA K+GL+ + G+ +
Sbjct: 542 --VEELKEWFVNGIGLENTPAMSPKTADKLGLRRVEGLNI 579
>gi|388582943|gb|EIM23246.1| DEAD-domain-containing protein [Wallemia sebi CBS 633.66]
Length = 744
Score = 234 bits (596), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 173/512 (33%), Positives = 260/512 (50%), Gaps = 69/512 (13%)
Query: 390 TIKALTAA--GYIQMTRVQEATLS--------ACLEGKDAVVKAKTGTGKSIAFLLPAIE 439
TI+A+T + + +M+ VQ A + + KD VK+KTGTGK++AFL+PAIE
Sbjct: 74 TIQAITVSPHKHTKMSPVQSAIFNLLPSLVDNHSKDRKDLFVKSKTGTGKTMAFLVPAIE 133
Query: 440 AVLKATS---------------SSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDG 484
A +KA +S + +I+ PTRELA+QIA EAI L +H G
Sbjct: 134 ARVKAIKEAGDAAGDNEKAKLKASKVFANSSVGAVIVSPTRELATQIANEAIKLCTHHKG 193
Query: 485 IGVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEAD 544
V VGG ++ I+V TPGR+ D ++ + L ML+LDEAD
Sbjct: 194 FQVRLFVGGANKGRQLSEFKNGRADIVVTTPGRMNDVLQTSPMVREALSTSPMLILDEAD 253
Query: 545 HLLDLGFRKDVENIVDCLPRR--RQSLLFSATMPKEL------VLKREHTYIDTVGLGSV 596
LL++GF+ ++ I+D LP RQS+L SAT+ + +LK +H YIDTV G
Sbjct: 254 TLLEMGFKDELNAIIDHLPSHPTRQSILLSATLSPAIRTVAKSILKSDHLYIDTVPEGES 313
Query: 597 ETPVKIKQSCLVAPHELHFQILH--HLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREM 654
+ KI Q P+ H Q+ H L+ L P K+++FC T +T L + R +
Sbjct: 314 NSHAKIPQYYSALPNPSH-QLPHLLRLIAHDQLTNPKSKIMIFCPTTKMTMLYSTIFRAL 372
Query: 655 ------KMNVREMYSRKPQLYRDRISEEFRASK--RLILVTSDVSARGMDYPDVTSVVQV 706
K NV E++S++ R R SE FR K +LVTSDVSARG+DYP+VT V+Q+
Sbjct: 373 SKELPTKANVFEIHSKRTMEQRSRASELFRKDKTDSSLLVTSDVSARGVDYPNVTRVIQI 432
Query: 707 GIPPDREQYIHRLGRTGR-EGKEGEGVLLLAPWEEYFL------DDLKDLPLDKL----- 754
GIPP +QY+HR+GRTGR + G ++ +E FL ++ D P +
Sbjct: 433 GIPPSADQYVHRIGRTGRGDNNAGRADFIMDYYELPFLTWQLNQHNIIDNPAKEFVKEVT 492
Query: 755 ----------QLPHLNPEIQLQMDNHMAKIDNNVKEAAYHAWLGYYNSIREIGR-DKTTL 803
L +N I+ + + ++++D + + LGYY + R K +
Sbjct: 493 QLAESSGKQGALDKVN-NIENAVSDLISQVDELAVRETFASLLGYYMPKAGVLRTTKGVV 551
Query: 804 VE-LANKFAQSIGLQRPPPLFRKTALKMGLKD 834
+E L + ++GL++PP + K+GL D
Sbjct: 552 IEGLKSWTTDAMGLEKPPYISDLFLKKLGLTD 583
>gi|119186585|ref|XP_001243899.1| hypothetical protein CIMG_03340 [Coccidioides immitis RS]
gi|392870620|gb|EAS32436.2| DEAD box RNA helicase HelA [Coccidioides immitis RS]
Length = 722
Score = 233 bits (595), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 169/503 (33%), Positives = 257/503 (51%), Gaps = 65/503 (12%)
Query: 391 IKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTT 450
+ A+ G MT +Q T++ L GKD + +AKTGTGK++AFL+P I+ +++ S T
Sbjct: 96 VDAILKMGITDMTEIQAQTINHTLNGKDVLAQAKTGTGKTLAFLVPVIQKIIRDDPSLRT 155
Query: 451 ------QLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLE 504
+ I +++ PTRELA QIA EA + + G+ V T VGGTR R+++
Sbjct: 156 GQKFRQRGGSNIRAVVISPTRELAEQIAEEAQKIAR-FTGVQVRTAVGGTRKIEGLRKIQ 214
Query: 505 SDPCQILVATPGRLLDHIEN-KSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLP 563
+ C +LV TPGRL+D + +SG++ LK VLDEAD LLD GF + ++ P
Sbjct: 215 REGCHLLVGTPGRLIDIFSDPRSGIAA--PNLKAFVLDEADRLLDDGFAPSIMDLQTYFP 272
Query: 564 RR----RQSLLFSATMPKELV------LKREHTYIDTVGLGSVETPVKIKQ-----SCLV 608
+R RQ+L+FSAT+ E++ LK++ +++ TV T +K+ Q C
Sbjct: 273 KRSEVDRQTLMFSATIAPEILSMVRRTLKQDFSFVKTVRDDEAPTHLKVPQRAVFLDCRS 332
Query: 609 APHELHFQILHHLLKEH----ILGTPDYKVIVFCSTGMVT---SLLYLLLREMKMNVR-- 659
+IL ++ H + +P ++ + ST V+ + LL + +
Sbjct: 333 NQMPAIMEILTQAIRRHETDPVQNSPFKAIVYYNSTNEVSIAAAAFNALLTDPESRFSPH 392
Query: 660 -------EMYSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDR 712
E++S+ Q R R S+ FR +K IL +SDV+ARGMD+P+VT V+QVG+P R
Sbjct: 393 PFGIKGIEIHSKLTQAQRTRNSDMFRRAKSAILFSSDVTARGMDFPNVTHVIQVGVPQSR 452
Query: 713 EQYIHRLGRTGREGKEGEG-VLLLAPWEEYFLDDLKDLPLDK---------LQLPHLNPE 762
E YIHRLGRT R K GEG +LL P F L+ LP+ + + + NP+
Sbjct: 453 ETYIHRLGRTARANKTGEGWILLTDPEYREFKTTLRGLPIQEDEALLKTAMIDMSRENPD 512
Query: 763 -------IQLQMDNHMAKIDNNVKEAAYHAWLGYYNSIREIGRDKTTLVELANKFAQSIG 815
I Q + +D +KE AY + LG S RD+ +L N
Sbjct: 513 APEPTASIISQAKQAYSGLDYTLKEKAYMSSLGLIRS-----RDQ--FRQLNNMTKHLWS 565
Query: 816 LQRPPPLFRKTALKMGLKDIPGI 838
L PPP+ A ++ ++ PGI
Sbjct: 566 LDSPPPISLALARRLNIRHYPGI 588
>gi|358375436|dbj|GAA92018.1| DEAD box ATP-dependent RNA helicase [Aspergillus kawachii IFO 4308]
Length = 547
Score = 233 bits (594), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 161/482 (33%), Positives = 254/482 (52%), Gaps = 42/482 (8%)
Query: 386 ISPLTIKALTAAGYIQMTRVQEATLSACLEGK-DAVVKAKTGTGKSIAFLLPAIEAVLKA 444
++P ++AL G+ MT VQ+ L+ + + D +V+AKTGTGK++AFLLP + +L
Sbjct: 20 LNPKLLQALKVLGFTHMTPVQQRVLTELPDWRSDCLVQAKTGTGKTLAFLLPTLHCLLDP 79
Query: 445 TSSSTTQLVPP---IYVLILCPTRELASQIAAEAIALLKNHD-GIGVLTLVGGTRFKVDQ 500
+ + PP + LI+ PTRELA QIA L + VGGT
Sbjct: 80 S------MAPPRGQVATLIVTPTRELAQQIAKSCDQLTSQMAVPLKCDIAVGGTARASAF 133
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
R + +LVATPGRL D++ +++L ++ L+LDEAD +L+ GF DV++I+
Sbjct: 134 SRFMKEAPSVLVATPGRLKDYLSEPEA-AIKLSNIRTLILDEADTMLESGFLADVKHIIR 192
Query: 561 CLPRRR---QSLLFSATMPKEL------VLKREHTYIDTVGLGSVETPVKIKQSCLVAPH 611
+P + Q + FSAT+P ++ VLK ++ I T+ T ++ Q ++ P
Sbjct: 193 HIPPKSAGWQGMCFSATLPPKVRDVVSVVLKPGYSSISTIDENETPTHERVPQYHVLMPS 252
Query: 612 EL-HFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLRE--MKMNVREMYSRKPQL 668
F L LL+ K+IVF T + SL K++V E++SR Q
Sbjct: 253 VADSFTTLASLLQLET--KTSSKIIVFGVTANMVSLFAAAFSRGLTKLSVFEIHSRLSQS 310
Query: 669 YRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKE 728
R + + +F+ + IL SDV RGMD+P+V V+QVG+P + EQY+HR+GRT R G +
Sbjct: 311 ARTKTTAQFKEAAAGILFASDVIGRGMDFPNVDLVIQVGLPTNGEQYVHRVGRTARAGND 370
Query: 729 GEGVLLLAPWEEYFLDDLKDLPLDKLQLPHLNPEIQLQ--------MDNHMAKIDNNVKE 780
G ++LL E +FL + LP+ PH + ++ + M ID K+
Sbjct: 371 GRAIILLTEAETFFLRSNRHLPIQ----PHPQTDAIIEGAASYAETVAEAMYTIDEEKKQ 426
Query: 781 AAYHAWLGYYNS---IREIGRDKTTLVELANKFA-QSIGLQRPPPLFRKTALKMGLKDIP 836
AY +++G++ ++++ DK LV++AN+ A Q + PP + +K KMGLK IP
Sbjct: 427 RAYSSFIGFFAGSGLLKQLRLDKPGLVQMANEMAIQGMACPEPPVIDKKIVGKMGLKGIP 486
Query: 837 GI 838
G
Sbjct: 487 GF 488
>gi|169767284|ref|XP_001818113.1| ATP-dependent RNA helicase mss116 [Aspergillus oryzae RIB40]
gi|238484133|ref|XP_002373305.1| DEAD box RNA helicase HelA, putative [Aspergillus flavus NRRL3357]
gi|83765968|dbj|BAE56111.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220701355|gb|EED57693.1| DEAD box RNA helicase HelA, putative [Aspergillus flavus NRRL3357]
gi|391870720|gb|EIT79896.1| ATP-dependent RNA helicase pitchoune [Aspergillus oryzae 3.042]
Length = 656
Score = 233 bits (593), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 177/515 (34%), Positives = 266/515 (51%), Gaps = 69/515 (13%)
Query: 382 DECGISPLTIKALTA-AGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
D+ + P+ I+ + G MT VQ T+ L+G D + +AKTGTGK++AFLLP ++
Sbjct: 83 DQGLVDPIIIRTINKNMGIKTMTDVQSMTIQETLQGHDVLAQAKTGTGKTLAFLLPVVQN 142
Query: 441 VLKATS--------SSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVG 492
+LK + S + I +++ PTRELA QIA EA + GI V + VG
Sbjct: 143 ILKDPTVKKRSYRRSGSGASSADIRAIVISPTRELAEQIATEARKIASG-TGIVVQSAVG 201
Query: 493 GTRFKVDQRRLESDPCQILVATPGRLLDHIEN-KSGLSVRLMGLKMLVLDEADHLLDLGF 551
GTR RR++ + C +LV TPGRL D + + +SG V L VLDEAD LLD GF
Sbjct: 202 GTRKTEGLRRIQREGCHLLVGTPGRLKDILSDPESG--VEAPKLSSFVLDEADRLLDDGF 259
Query: 552 RKDVENIVDCLPR----RRQSLLFSATMPKELV------LKREHTYIDTVGLGSVET--- 598
++ +I LP RQ+L+FSAT+PKE++ +K + + TV V T
Sbjct: 260 APEIFDIQRLLPDPMKVDRQTLMFSATVPKEVLSMVHQTMKPDFRTVQTVKDDEVPTHFA 319
Query: 599 -PVKIK-----QSCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLR 652
P K+ Q+ L A EL H+ + +K IV+ ++ M +L + + +
Sbjct: 320 VPQKVVTLDGFQNALPAILELAKNYQAHMANDR--NARPFKAIVYFNSTMQVNLAHQVFK 377
Query: 653 EM--------------KMNVREMYSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYP 698
++ +M++ E++SR Q R S+ FR S+ IL +SDV+ARG+D+P
Sbjct: 378 KLLNNPDDRRSGHPLNRMHIMELHSRLSQSRRTLTSDFFRNSRSGILFSSDVTARGLDFP 437
Query: 699 DVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLAPWEEYFLD-DLKDLPLDK---- 753
DVT V+QVG P R+ YIHR+GRTGR KEGEG LLL P E ++ L DLP++K
Sbjct: 438 DVTHVIQVGAPRARDTYIHRIGRTGRANKEGEGWLLLHPGENGWVQKKLGDLPIEKDHSL 497
Query: 754 -LQLPHLNPEIQ-----------LQMDNHMAKIDNNVKEAAYHAWLGYYNSIREIGRDKT 801
+ ++ E+ Q+ M ++ +++E A+ + LG SI RD
Sbjct: 498 ATAVTNMRQEVGDEVSPSAAESVAQVKAAMEQVPEDIREHAFKSQLGGLLSIFSRPRD-- 555
Query: 802 TLVELANKFA-QSIGLQRPPPLFRKTALKMGLKDI 835
+V N+ A L PP + A +G+ D+
Sbjct: 556 -MVLAMNELAVHGYYLPGPPAISPGMAQNLGVADV 589
>gi|340905216|gb|EGS17584.1| hypothetical protein CTHT_0069190 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 1439
Score = 233 bits (593), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 169/468 (36%), Positives = 241/468 (51%), Gaps = 36/468 (7%)
Query: 402 MTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLVPPIYVLIL 461
MT VQE L A KD +V++KTGTGK+IAFLLPA+ ++ + ++ + +LIL
Sbjct: 894 MTPVQEKILCASDWRKDYLVQSKTGTGKTIAFLLPALHNLVSDKTLDRSK----VGLLIL 949
Query: 462 CPTRELASQIAAEAIALL-KNHDGIGVLTLVGGTRFKVDQRRLESDPC-QILVATPGRLL 519
PTRELA QI E L+ K I VGG + RR P I+VATPGRL
Sbjct: 950 APTRELAEQIQDECNKLITKVSPQIYCHLAVGGKKRASQLRRFMESPAPTIVVATPGRLD 1009
Query: 520 DHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLP----RRRQSLLFSATM 575
D ++ + + + L+ L+LDEAD +LD GF D+ I+ LP + Q + FSAT+
Sbjct: 1010 DWLQ-EDDVRQKFSQLRCLILDEADRMLDAGFAPDIRRILARLPPKSTAKWQGMCFSATL 1068
Query: 576 PKE------LVLKREHTYIDTVGLGSVETPVKIKQSCLVAPH-ELHFQILHHLLK-EHIL 627
P + +VL+ EH I T+ T + Q + P E LH L +
Sbjct: 1069 PPDVKDLVSIVLEAEHVTISTINPNEAPTIETVPQMVIPVPSLEDVLPTLHSFLSCARVD 1128
Query: 628 GTPDYKVIVFCSTGMVTSLLYLLLREM------KMNVREMYSRKPQLYRDRISEEFRASK 681
K I+FCST LLY + K+ V +M+SR Q R + EEF+ +K
Sbjct: 1129 ANGQLKAIIFCSTARYAGLLYHVFGHTGGAAPPKLGVWQMHSRMSQAARTKTIEEFKEAK 1188
Query: 682 RLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLAPWEEY 741
L SDV RGMD PDV +VQVG+P D +QY+HR+GRTGR GK G V++L P E +
Sbjct: 1189 SGWLFASDVVGRGMDIPDVNLIVQVGLPSDADQYVHRVGRTGRAGKTGRAVMILPPEEMW 1248
Query: 742 FLDDLKDLPLDKLQLPHLNPE------IQLQMDNHMAKIDNNVKEAAYHAWLGYYNS-IR 794
F+ P+ K P +P+ +Q+ ++ ++KI KE Y A LG+ + +R
Sbjct: 1249 FVKQNPQFPI-KNNGPFTHPKAATWPSVQI-INTALSKIPTQTKEQTYLAMLGWVKTFMR 1306
Query: 795 EIGRDKTTLVELANKFAQSIGLQRPPPLFRKTALKMGLKDIPGIRLRK 842
G D V+ ++FA SIG + P + + + LK P + L K
Sbjct: 1307 RYGFDGPKFVDYTSRFAFSIGCESIPEIPSRVIQQANLK--PFVSLFK 1352
>gi|281208736|gb|EFA82911.1| putative RNA helicase [Polysphondylium pallidum PN500]
Length = 698
Score = 232 bits (592), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 159/460 (34%), Positives = 247/460 (53%), Gaps = 26/460 (5%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F+ I T KA+ + +MT +Q T+ LEG+D + A+TG+GK++AFL+PAIE
Sbjct: 196 FNSLPIEEKTKKAIAEMKFTKMTPIQAKTIMPLLEGRDLLGAARTGSGKTLAFLIPAIEI 255
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
++KA V+I+ PTRELA QI A L+ NH L + G + +
Sbjct: 256 LVKANFKPRNG----TGVIIISPTRELALQIYGVARELMLNHTQTHGLVIGGNNDKRAEI 311
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
RLE +LV TPGRLLDH++N G V+ LK LV+DEAD +L++GF +D+ IV
Sbjct: 312 ERLEKG-VNLLVCTPGRLLDHLQNTRGFIVK--NLKCLVIDEADRILEVGFEEDMHQIVK 368
Query: 561 CLPRRRQSLLFSATMPKEL------VLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELH 614
LP+ RQ++LFSAT +++ +E Y+ V T ++Q +V P E
Sbjct: 369 LLPKERQTMLFSATQTRKVDDIARVSFNKEPVYVGVDDDREVSTVEGLEQGYVVCPSEKR 428
Query: 615 FQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRIS 674
F +L+ LK+++ + KVIVF S+ LL + + V E + ++ Q R
Sbjct: 429 FLLLYTFLKKNL----NKKVIVFLSSCNSVKYHAELLNFIGIPVLEFHGKQKQQKRTNTF 484
Query: 675 EEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGRE-GKEGEGVL 733
EF +++ IL+ +DV+ARG+D P V ++Q P D ++YIHR+GRT R GK+G +L
Sbjct: 485 YEFVNAEKGILICTDVAARGVDIPSVDWIIQFDPPDDPKEYIHRVGRTARGVGKKGRALL 544
Query: 734 LLAPWEEYFLDDLK--DLPLDKLQLPHLN-PEIQLQMDNHMAK---IDNNVKEAAYHAWL 787
L P E FL LK +PL++ + P +Q Q++ +A + N+ ++ AY +++
Sbjct: 545 FLLPQELTFLKYLKLAKVPLNEYEFPQKKVSNVQDQLEKLVANNYYLHNSARD-AYKSYI 603
Query: 788 GYYNSIREIGRDKTTLVELANKFAQSIGLQRPPPLFRKTA 827
Y S ++LA+ A + G Q PP + A
Sbjct: 604 HSYASHSLKDTFNVNSLDLAS-VALAFGFQNPPKIVFNIA 642
>gi|219111321|ref|XP_002177412.1| helicase_1 [Phaeodactylum tricornutum CCAP 1055/1]
gi|217411947|gb|EEC51875.1| helicase_1, partial [Phaeodactylum tricornutum CCAP 1055/1]
Length = 455
Score = 232 bits (592), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 164/436 (37%), Positives = 238/436 (54%), Gaps = 34/436 (7%)
Query: 329 ITKRVPLKSLEDEHDFEEQ-VELIRKEISKNKLNGN-GEKKEKREEEPILSQKRFDE-CG 385
+ KRV +S+ D E V R+ + + N GE + +E P FD+
Sbjct: 34 VPKRVKNQSIHDSLSRESAAVTSCRRLHAPGSTDHNPGESATQPDELP-----NFDDLVD 88
Query: 386 ISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKAT 445
+ P+ L G +MT +Q T A + G D + +A+TGTGK++AFLLP++E +L+
Sbjct: 89 LDPILKSILKENGLQRMTEIQAKTWDASVGGNDVIGRARTGTGKTLAFLLPSMERLLRNK 148
Query: 446 SSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGI-GVLTLVGGTRFKVDQRRLE 504
S I LI+ PTRELA QI +A L+ + + GG + D R LE
Sbjct: 149 HSGNQ-----IRALIISPTRELARQIGEQAQMLVHGYKRTHSSQVMYGGASRERDVRDLE 203
Query: 505 SDPCQILVATPGRLLDHIENKSGLSVRLMG-----LKMLVLDEADHLLDLGFRKDVENIV 559
IL ATPGRL+DH+ N + + + G + +LVLDE D LL +GF D+ I+
Sbjct: 204 RRIPSILTATPGRLIDHL-NSTQVKSKPFGNYLSDVDVLVLDEMDRLLGMGFCDDIVEIL 262
Query: 560 DCLPRRRQSLLFSATMPKEL------VLKREHTYIDTVGLG--SVETPVKIKQSCLVAPH 611
LP+ RQ+LLFSAT P E+ +K HT +D + G S T + Q +V P
Sbjct: 263 QYLPQNRQTLLFSATSPPEVRRMIDQCVKPNHTVVDCMQEGDPSTYTNTIVGQRHVVLPP 322
Query: 612 ELHFQILHHLLK--EHILGTPDYKVIVFC-STGMVTSLLYLLLREMKMNVREMYSRKPQL 668
+ +I+ +L+ + ++ PDYK++VF +T VT L R + + V ++S+ Q
Sbjct: 323 D---RIVSGVLQIVQLLMMDPDYKILVFFPTTAQVTYYSQLFNRGIGLPVLSIHSKMSQS 379
Query: 669 YRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKE 728
R S+ FR + R +L TSD+SARG+DYPDVT V+QVG D E YIHRLGRTGR GK+
Sbjct: 380 LRTNNSDRFRFASRAVLFTSDISARGVDYPDVTHVIQVGAASDSETYIHRLGRTGRAGKK 439
Query: 729 GEGVLLLAPWEEYFLD 744
G+G+L+L E FL+
Sbjct: 440 GQGLLILTSDEIDFLN 455
>gi|403262859|ref|XP_003923784.1| PREDICTED: probable ATP-dependent RNA helicase DDX10 isoform 1
[Saimiri boliviensis boliviensis]
Length = 869
Score = 232 bits (592), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 149/428 (34%), Positives = 238/428 (55%), Gaps = 32/428 (7%)
Query: 380 RFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIE 439
RF + +S T+K L A Y +T +Q+ T+ L+GKD + AKTG+GK++AFL+P +E
Sbjct: 70 RFSDFPLSKKTLKGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLE 129
Query: 440 AVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVD 499
A+ + +ST L VLI+ PTRELA Q + KNHD L ++GG K +
Sbjct: 130 ALYRLQWTSTDGL----GVLIISPTRELAYQTFEVLRKVGKNHDFSAGL-IIGGKDLKHE 184
Query: 500 QRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIV 559
R+ + ILV TPGRLL H++ +S L+MLVLDEAD +LD+GF + I+
Sbjct: 185 AERINN--INILVCTPGRLLQHMDE--TVSFHATDLQMLVLDEADRILDMGFADTMNAII 240
Query: 560 DCLPRRRQSLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHEL 613
+ LP++RQ+LLFSAT K L LK Y+ TP ++Q+ +V +
Sbjct: 241 ENLPKKRQTLLFSATQTKSVKDLARLSLKNPE-YVWVHEKAKYSTPATLEQNYIVCELQQ 299
Query: 614 HFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK--MNVREMYSRKPQLYRD 671
+L+ L+ H+ K IVF S+ LY + ++ +++ ++ R+ Q+ R
Sbjct: 300 KISVLYSFLRSHL----KKKSIVFFSSCKEVQYLYRVFCRLRPGISILALHGRQQQMRRM 355
Query: 672 RISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEG 731
+ EF K +L +D++ARG+D+P V V+Q P D YIHR GRT R ++GE
Sbjct: 356 EVYNEFVRKKAAVLFATDIAARGLDFPAVNWVLQFDCPEDANTYIHRAGRTARYKEDGEA 415
Query: 732 VLLLAPWEEYFLDDL--KDLPLDKLQLPHLNPE----IQLQMDNHMAKIDNNVKEAAYHA 785
+L+L P E+ + L K +P+ +++ +NPE +Q ++++ +A+ D ++KE A
Sbjct: 416 LLILLPSEKAMVQQLLQKKVPVKEIK---INPEKLIDVQKKLESFLAQ-DQDLKERAQRC 471
Query: 786 WLGYYNSI 793
++ Y S+
Sbjct: 472 FVSYIRSV 479
>gi|417405074|gb|JAA49262.1| Putative atp-dependent rna helicase [Desmodus rotundus]
Length = 877
Score = 232 bits (591), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 162/476 (34%), Positives = 253/476 (53%), Gaps = 46/476 (9%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
KRF + IS T+K L A Y +T +Q+ T+ L+GKD + AKTG+GK++AFL+P +
Sbjct: 69 KRFSDFPISKKTLKGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVL 128
Query: 439 EAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
EA+ + +S L VLI+ PTRELA Q + KNHD L ++GG K
Sbjct: 129 EALYRLQWTSADGL----GVLIISPTRELAYQTFEVLRKVGKNHDFSAGL-IIGGKDLKH 183
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
+ R+ + ILV TPGRLL H++ + L+MLVLDEAD +LD+GF + I
Sbjct: 184 EAERINN--INILVCTPGRLLQHMD--ETICFHATNLQMLVLDEADRILDMGFADTMNAI 239
Query: 559 VDCLPRRRQSLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHE 612
++ LP++RQ+LLFSAT K L LK Y+ TP ++Q+ +V +
Sbjct: 240 IENLPKKRQTLLFSATQTKSVKDLARLSLKNPE-YVWVHEKAKYSTPATLEQNYIVCELQ 298
Query: 613 LHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK--MNVREMYSRKPQLYR 670
+L+ L+ H+ K IVF S+ LY + ++ +++ ++ R+ Q+ R
Sbjct: 299 QKISVLYSFLRSHL----KKKSIVFFSSCKEVQYLYRVFCRLRPGISILALHGRQQQMRR 354
Query: 671 DRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGE 730
+ EF + L +D++ARG+D+P V V+Q P D YIHR GRT R ++GE
Sbjct: 355 MEVYNEFVRKRAAALFATDIAARGLDFPAVNWVLQFDCPEDANTYIHRAGRTARYKEDGE 414
Query: 731 GVLLLAPWEEYFLDDL--KDLPLDKLQLPHLNPE----IQLQMDNHMAKIDNNVKEAAYH 784
+L+L P EE + L K +P+ +++ +NPE +Q ++++ +A+ D ++KE A
Sbjct: 415 ALLILLPSEEGMVQQLLQKKVPVKEIK---INPEKLIDVQKKLESFLAQ-DQDLKERAQR 470
Query: 785 AWLGYYNSIREIGRDKTTLVELANKFAQSIGLQRPPPLFRKTALKMGLKDIPGIRL 840
++ Y S+ + +DK NK P P + AL +GL P IR
Sbjct: 471 CFVSYIRSVY-LMKDKEIFD--VNKL--------PIPEY---ALSLGLAVAPRIRF 512
>gi|449304355|gb|EMD00362.1| hypothetical protein BAUCODRAFT_80806, partial [Baudoinia
compniacensis UAMH 10762]
Length = 645
Score = 231 bits (590), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 179/528 (33%), Positives = 262/528 (49%), Gaps = 73/528 (13%)
Query: 380 RFDECG----ISPLTIKALTA-AGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFL 434
RFDE G + ++ LT G MT VQ+AT++ L+G D + +AKTGTGK++AFL
Sbjct: 77 RFDELGSRNIVHHNVVRTLTQDMGLETMTEVQQATINEALKGTDIIAQAKTGTGKTLAFL 136
Query: 435 LPAIEAVLKA---------TSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGI 485
LP ++ ++ + I LI+ PTRELA QIA EA + + H GI
Sbjct: 137 LPILQNIINVDPQLAERGFSRRGPRTTADDIRALIISPTRELAEQIAEEAKKVTR-HTGI 195
Query: 486 GVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADH 545
V T VGGT+ R ++ C +LV TPGRL D + + V+ L LV DEAD
Sbjct: 196 VVQTAVGGTQKSAGLRAIQHQGCHLLVGTPGRLKDILTDPYS-RVQAPDLSALVFDEADR 254
Query: 546 LLDLGFRKDVENIVDCLP----RRRQSLLFSATMPKELV------LKREHTYIDTVGLGS 595
LLD GF +++ I+ LP R RQ+++FSAT+P+E+V LK Y+ TV
Sbjct: 255 LLDQGFWPEIQEIMRLLPTPAERNRQTMMFSATVPREVVDLVRSTLKPGFQYVKTVRDDE 314
Query: 596 VETPVKIKQSCL-VAPHELHFQILHHLLKEHI-----LGTPDYKVIVFCSTGMVTSLLYL 649
T ++ Q + V E L L+ + + G +K IV+ ++ SL
Sbjct: 315 EPTHARVPQRVVTVNGFENKLPALVELISKAVEASKQPGGRPFKAIVYYNSTAEVSLAAS 374
Query: 650 LLREMKM---------------------NVREMYSRKPQLYRDRISEEFRASKRLILVTS 688
LR + + ++++R Q R ++ FR IL++S
Sbjct: 375 ALRNLSTPESSSTDSFGGRRGTHPWPSTKIFDIHARLSQSQRTAAADAFRHCTSGILLSS 434
Query: 689 DVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLAPWEEYFL-DDLK 747
DV+ARG+D+P+VT V+Q+ IPP REQYIHR+GRT R GKEGEG L+++ E + L+
Sbjct: 435 DVTARGLDFPNVTHVIQMAIPPSREQYIHRIGRTARAGKEGEGYLIISHLETGEVRSRLQ 494
Query: 748 DLPL---DKLQLPHLNPEIQLQMDNHMAKIDNNVKEA-----------AYHAWLGYYNSI 793
LPL + L L+ + Q+ KI V+ A Y A LG Y I
Sbjct: 495 KLPLQPTNTLTTASLDLTRESQVPAEAGKILEMVRGAVTGVSMLDKVKVYQALLGVYGYI 554
Query: 794 REIGRDKTTLVELANKFAQ-SIGLQRPPPLFRKTALKMGLKDIPGIRL 840
+K LVE N A G++ PP + A ++ L +PG+R+
Sbjct: 555 ----GNKRHLVEAMNNLALFGWGMREPPSIAPGLASRLRLDRVPGVRI 598
>gi|320586377|gb|EFW99056.1| dead box RNA helicase [Grosmannia clavigera kw1407]
Length = 613
Score = 231 bits (590), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 177/496 (35%), Positives = 260/496 (52%), Gaps = 68/496 (13%)
Query: 381 FDECGISPLTIKALTAA-GYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIE 439
+ G+ +++LT GY MT VQ AT++ L GKD V +AKTGTGK++AFL+P I+
Sbjct: 93 LESLGVHTNLVRSLTETLGYETMTPVQSATITPALSGKDIVAQAKTGTGKTLAFLVPVIQ 152
Query: 440 AVLKATSSSTTQLVPP---------IYVLILCPTRELASQIAAEAIALLKNHDGIGVLTL 490
++ + L P I +IL PTRELA QI EA L G+ V T
Sbjct: 153 KMI----TENPNLAYPRRIRAKANDILAIILSPTRELAEQIGEEARKLCHG-TGVIVQTA 207
Query: 491 VGGTRFKVDQRRLESDPCQILVATPGRLLDHIENK-SGLSVRLMGLKMLVLDEADHLLDL 549
VGGTR + R C +++ATPGRL D + ++ SG+ L LVLDEAD +LD+
Sbjct: 208 VGGTRKREMLMRTRQQGCHLMIATPGRLNDILSDEMSGIDAPR--LAALVLDEADRMLDV 265
Query: 550 GFRKDVENIVDCLPRR----RQSLLFSATMPKELVLKREHTYIDTVGLGSVET------P 599
GF +++ IV LP R RQ+LLFSAT+PK V+ TY+D V+T P
Sbjct: 266 GFDQELREIVRHLPNRSEQPRQTLLFSATLPKN-VISLARTYVDPTNFQFVQTIDANDSP 324
Query: 600 V--KIKQSCL-VAPHELHFQILHHLLKEHIL--------GTPDYKVIVFCSTGMVTSLLY 648
K+ Q + V +E + + L K I G P +K IVF T L
Sbjct: 325 THEKVPQHIVEVKGYENIYPTVLELFKREIREAKEAGDEGKP-FKAIVFLPTTNFVQLTA 383
Query: 649 LLLREMKMNVREM------YSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTS 702
+ R + + E+ +S+ Q R ++ FR + IL +SDV+ARGMD+P+VT
Sbjct: 384 VAFRMLARSNPELPYLYHIHSKLTQSARTNAADMFRRANTGILFSSDVTARGMDFPNVTH 443
Query: 703 VVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLAPWEEY--FLDDLKDLPL---DKLQLP 757
V+Q+G+PPDREQYIHRLGRTGR K GEG +++ P +E + L DLP+ D L+
Sbjct: 444 VIQIGVPPDREQYIHRLGRTGRADKGGEGWIIV-PRDEMRSARNVLVDLPIKRADGLESA 502
Query: 758 HLN----------PEIQLQMDNHMAKIDNNVKEAAYHAWLGYYNSIREIGRDKTTLVELA 807
+ PE+ + + M ++ + E Y ++ G + IGR+ T ++
Sbjct: 503 THDLSTAEADVPPPELFTHVSSAMQRVPAGLLEDTYMSFFGG----QSIGRNVQTTLDNL 558
Query: 808 NKFAQ-SIGLQRPPPL 822
N++ + G ++PP +
Sbjct: 559 NEWVRLGWGWEQPPAI 574
>gi|384945586|gb|AFI36398.1| putative ATP-dependent RNA helicase DDX10 [Macaca mulatta]
Length = 872
Score = 231 bits (590), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 158/474 (33%), Positives = 257/474 (54%), Gaps = 44/474 (9%)
Query: 380 RFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIE 439
RF + +S T+K L A Y +T +Q+ T+ L+GKD + AKTG+GK++AFL+P +E
Sbjct: 70 RFSDFPLSKKTLKGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLE 129
Query: 440 AVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVD 499
A+ + +ST L VLI+ PTRELA Q + KNHD L ++GG K +
Sbjct: 130 ALYRLQWTSTDGL----GVLIISPTRELAYQTFEVLRKVGKNHDFSAGL-IIGGKDLKHE 184
Query: 500 QRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIV 559
R+ + ILV TPGRLL H++ +S L+MLVLDEAD +LD+GF + I+
Sbjct: 185 AERINN--INILVCTPGRLLQHMDE--TVSFHATDLQMLVLDEADRILDMGFADTMNAII 240
Query: 560 DCLPRRRQSLLFSATMPKEL-----VLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELH 614
+ LP++RQ+LLFSAT K + + ++ Y+ TP ++Q+ +V +
Sbjct: 241 ENLPKKRQTLLFSATQTKSVKDLARLSLKDPEYVWVHEKAKYSTPATLEQNYIVCELQQK 300
Query: 615 FQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK--MNVREMYSRKPQLYRDR 672
+L+ L+ H+ K IVF S+ LY + ++ +++ ++ R+ Q+ R
Sbjct: 301 ISVLYSFLRSHL----KKKSIVFFSSCKEVQYLYRVFCRLRPGISILALHGRQQQMRRME 356
Query: 673 ISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGV 732
+ EF + +L +D++ARG+D+P V V+Q P D YIHR GRT R ++GE +
Sbjct: 357 VYNEFVHKRAAVLFATDIAARGLDFPAVNWVLQFDCPEDANTYIHRAGRTARYKEDGEAL 416
Query: 733 LLLAPWEEYFLDDL--KDLPLDKLQLPHLNPE----IQLQMDNHMAKIDNNVKEAAYHAW 786
L+L P E+ + L K +P+ +++ +NPE +Q ++++ +A+ D ++KE A +
Sbjct: 417 LILLPSEKAMVQQLLQKKVPVKEIK---INPEKLIDVQKKLESFLAQ-DQDLKERAQRCF 472
Query: 787 LGYYNSIREIGRDKTTLVELANKFAQSIGLQRPPPLFRKTALKMGLKDIPGIRL 840
+ Y S+ + +DK F S + P P + AL +GL P IR
Sbjct: 473 VSYIRSVY-LMKDKEV-------FDVS---KLPIPEY---ALSLGLAVAPRIRF 512
>gi|295414108|ref|XP_002785983.1| DEAD box ATP-dependent RNA helicase, putative [Perkinsus marinus
ATCC 50983]
gi|239900091|gb|EER17779.1| DEAD box ATP-dependent RNA helicase, putative [Perkinsus marinus
ATCC 50983]
Length = 1031
Score = 231 bits (589), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 164/461 (35%), Positives = 244/461 (52%), Gaps = 41/461 (8%)
Query: 418 DAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIA 477
D ++KA+TGTGK++ FLLP +EA++ + + V LILCPTREL Q E
Sbjct: 543 DVLIKARTGTGKTLTFLLPIVEAIVNTPNWKSHGGVS---ALILCPTRELGLQTCTELDR 599
Query: 478 LLKNHD-GIGVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLK 536
LL +HD + + LVGG + D L +I+V TPGR+ DHIE L+
Sbjct: 600 LLVHHDRELSAVALVGGVPRRHDLETLRKRRPKIIVGTPGRIGDHIEGTFMFHTLFEKLE 659
Query: 537 MLVLDEADHLLDLGFRKDVENIVD-CLPRRRQSLLFSATMPKELVLK------REHTYID 589
LVLDEAD LL+L F D +IVD +PR R+++L SAT+P+ L+ K R + ++D
Sbjct: 660 WLVLDEADRLLELSF-ADTLDIVDGVMPRSRRTILCSATIPEVLLGKAQSWCHRGYAFVD 718
Query: 590 TVGLGS-----------VETPVKI--KQSCLVAPHELHFQILHHLLKEHILGTP-DYKVI 635
+G S V TP + KQ + P LH++L++ I P D+K++
Sbjct: 719 CIGDASSSHGQADTMEVVATPESMNDKQFYVTCPAHRIVTALHNILQDEITKAPYDHKIM 778
Query: 636 VFCSTGMVTSLLYLLL-REMKMNVREMYSRKPQLYRDRISEEFRASKRLILVTSDVSARG 694
VF T +T+ L R+ +M V EM+ ++ Q R S +F+ S+ I+ TSDVS+RG
Sbjct: 779 VFFPTARMTAFFSTLFNRQFRMPVIEMHKKRNQNERTLASAQFQTSESAIMFTSDVSSRG 838
Query: 695 MDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLAPWEEYFLDDLK--DLPLD 752
MDY DV+SV+QV P + Y+HR+GRT R GKEG VLLL E F+ DL +PL
Sbjct: 839 MDYSDVSSVIQVMAPSHVDSYVHRVGRTARAGKEGMAVLLLPEEESSFVSDLTRHSIPLK 898
Query: 753 KLQLPHLNPEIQLQMDNHMAK------IDNNVK-----EAAYHAWLGYYNSIREIGRDKT 801
L +P+ L ++ A +N E + + L + S R R+ +
Sbjct: 899 PLPRALQDPQWLLNTNDLTATALSGGWASSNASMLHQAETMFSSLLAHLKSSRAKLRN-S 957
Query: 802 TLVELANKFAQSIGLQRPPPLFRKTALKMGLKDIPGIRLRK 842
++ +A+ +S G+ P + A K+G+ D P +R+ K
Sbjct: 958 QIIAIASGVLRSTGMSAVPGVPEDLAQKLGMLDEPDLRILK 998
>gi|410079745|ref|XP_003957453.1| hypothetical protein KAFR_0E01640 [Kazachstania africana CBS 2517]
gi|372464039|emb|CCF58318.1| hypothetical protein KAFR_0E01640 [Kazachstania africana CBS 2517]
Length = 760
Score = 231 bits (589), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 161/473 (34%), Positives = 254/473 (53%), Gaps = 36/473 (7%)
Query: 371 EEEPILSQ-KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGK 429
E +P LS+ K F + IS T+K L + +IQ+T +Q ++ L+G D + A+TG+GK
Sbjct: 32 EYDPSLSKAKFFKDLPISAQTLKGLNESAFIQLTGIQRDSIPVSLKGHDVLGAARTGSGK 91
Query: 430 SIAFLLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLT 489
++AFL+P +E + + ++ L LI+ PTRELA QI E + + H
Sbjct: 92 TLAFLIPVLEKLYREKWTAFDGL----GALIISPTRELAMQIY-EVLIKIGRHTSFSAGL 146
Query: 490 LVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDL 549
++GG K + R+ IL+ TPGR+L H++ GLS L+MLVLDEAD LD+
Sbjct: 147 VIGGKDVKFESERISK--INILIGTPGRVLQHLDQAVGLSTS--NLQMLVLDEADRCLDM 202
Query: 550 GFRKDVENIVDCLPRRRQSLLFSATMPKELVLKREHTYIDTVGLGSVE-----------T 598
GF+K ++ IV LP RQ+LLFSAT L + D +G++E T
Sbjct: 203 GFKKTLDAIVSNLPASRQTLLFSATQSNSLADLARLSLTDYKSVGTLEMADDNQANSSAT 262
Query: 599 PVKIKQSCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK--M 656
P ++QS ++ IL +K H+ K+IVF S+ +Y R+M+ +
Sbjct: 263 PETLQQSHIIVALPDKLDILFSFIKTHLKA----KLIVFLSSSKQVHFVYETFRKMQPGI 318
Query: 657 NVREMYSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYI 716
++ ++ R+ Q R ++F ++ + L +DV ARG+D+P V V+QV P D + YI
Sbjct: 319 SLMHLHGRQKQKARTETLDKFNRAQHVCLFATDVVARGIDFPAVNWVIQVDCPEDVDTYI 378
Query: 717 HRLGRTGREGKEGEGVLLLAPWE-EYFLDDLKDLPLDKLQLPHLNPEIQL---QMDNHMA 772
HR+GRTGR GK+G+ +++L P E E FL+ LK ++ +L + + Q+ + +
Sbjct: 379 HRVGRTGRYGKKGKSLIMLTPQEQEGFLNRLKSRNIEPEKLTIKQSKKKSIKPQLQSLLF 438
Query: 773 KIDNNVKEAAYHAWLGYYNSIREIGRDKTT--LVELANK-FAQSIGLQRPPPL 822
K D +K A A++ Y SI I +DK EL + FA+S+GL P +
Sbjct: 439 K-DPELKYLAQKAFISYVRSIY-IQKDKEVFHFEELPTEDFARSLGLPGAPKI 489
>gi|115397647|ref|XP_001214415.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114192606|gb|EAU34306.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 615
Score = 231 bits (588), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 184/511 (36%), Positives = 263/511 (51%), Gaps = 58/511 (11%)
Query: 382 DECGISPLTIKALTAAGYIQ-MTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
D+ + P I+ +TA I+ MT VQ T++ L G+D + +AKTGTGK+IAFLLP ++
Sbjct: 81 DQGLVHPRIIRTITAEKNIKTMTEVQSMTINETLSGRDVLAQAKTGTGKTIAFLLPVLQN 140
Query: 441 VLK-----ATSSSTTQLVPP-IYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGT 494
+LK A S + P I +I+ PTRELA QIA EA L G+ V T VGGT
Sbjct: 141 ILKDQSIKARPSRNNRPTPSDIRGIIISPTRELAEQIAKEARQLAYG-TGVVVQTAVGGT 199
Query: 495 RFKVDQRRLESDPCQILVATPGRLLDHIENK-SGLSVRLMGLKMLVLDEADHLLDLGFRK 553
R + +++ C +LV TPGRL D + + SG++ L VLDEAD LLD GF
Sbjct: 200 RKREHLMQMKRQGCHLLVGTPGRLKDLLSDPYSGVAA--PNLSSFVLDEADRLLDDGFAP 257
Query: 554 DVENIVDCLPRR----RQSLLFSATMPKELV------LKREHTYIDTVGLGSVETPVKIK 603
D++ + LP RQ+LLFSAT+P+E++ +K ++ +I TV V T + +
Sbjct: 258 DIQELQRMLPDPMKVDRQTLLFSATVPREVMTMVRRTMKPDYKFIRTVKEDEVPTHLAVP 317
Query: 604 QSCLVAP-HELHFQILHHLLKEHIL-----GTPDYKVIVFCSTGMVTSLLYLLLREMK-- 655
Q ++ ++ + L K + G P ++ F ST V + L +K
Sbjct: 318 QKAVILDGYQNALPAILELAKTYAAEPANRGRPFKAIVYFNSTKQVRIAFEVFLELLKGR 377
Query: 656 ----------MNVREMYSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQ 705
+ E++SR Q R R SE FR S+ IL +SDV+ARGMD+P VT V+Q
Sbjct: 378 DSPLKAHGLGTRIYELHSRLSQDKRTRTSEFFRESRSAILFSSDVTARGMDFPGVTHVLQ 437
Query: 706 VGIPPDREQYIHRLGRTGREGKEGEGVLLLAPWE-EYFLDDLKDLPLD---KLQLPHLN- 760
VG+P DR YIHRLGRTGR + GEG + L E L +LP++ L + N
Sbjct: 438 VGLPRDRPTYIHRLGRTGRANQTGEGWIFLHRGEIPVSRTRLSELPIEVDSSLSMATANM 497
Query: 761 ----------PEIQLQMDNHMAKIDNNVKEAAYHAWLGYYNSIREIGRDKTTLVELANKF 810
EI Q+++ M+KI ++ K AY + L SI + K L + N
Sbjct: 498 REPLDADEPEGEIITQINSAMSKIPDDSKAEAYLSQLT--GSISAFDK-KNVLAQAMNDL 554
Query: 811 A-QSIGLQRPPPLFRKTALKMGLKDIPGIRL 840
A GL PP + A K GL + G++L
Sbjct: 555 AVYGYGLPSPPEIPYPIAQKSGLLRVQGLQL 585
>gi|317139273|ref|XP_001817386.2| ATP-dependent RNA helicase MSS116 [Aspergillus oryzae RIB40]
Length = 554
Score = 231 bits (588), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 165/483 (34%), Positives = 252/483 (52%), Gaps = 54/483 (11%)
Query: 391 IKALTAAGYIQMTRVQEATLSACLEGK-DAVVKAKTGTGKSIAFLLPAIEAVLKATSSST 449
++AL + MT VQ L+ + D +V+AKTGTGK++AFLLP + +L+ S+
Sbjct: 25 LQALKVMEFEYMTPVQHRVLTELPSWRSDCLVQAKTGTGKTLAFLLPTLHCLLQGHSA-- 82
Query: 450 TQLVPP---IYVLILCPTRELASQIAAEAIAL-------LKNHDGIGVLTLVGGTRFKVD 499
PP + +LI+ PTRELA QIA L L+ H +G G R
Sbjct: 83 ----PPRGQVAILIITPTRELAQQIAKSCDQLTSQLARPLECHIAVG-----GTARASAL 133
Query: 500 QRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIV 559
R ++ P ILVATPGRL D++ S + +L ++ L+LDEAD +L+ GF DV+ I+
Sbjct: 134 ARFMKGAP-SILVATPGRLKDYLSEPS-TAEKLSNIQTLILDEADTMLESGFLADVKRIL 191
Query: 560 DCLPRRR---QSLLFSATMPKEL------VLKREHTYIDTVGLGSVETPVKIKQSCLVAP 610
+P + Q + FSAT+P ++ VLK +T I T+ T ++ Q ++ P
Sbjct: 192 QLIPPKSTGWQGMCFSATVPPKVKDVVSVVLKPGYTSISTIEKNETPTHERVPQYHVLIP 251
Query: 611 HEL-HFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLRE--MKMNVREMYSRKPQ 667
F L LL I + K+IVF T + +L + + V E++SR Q
Sbjct: 252 SVADTFTTLASLLNLEIKNS--SKIIVFGVTANMVALFAAAFSQGLTPLKVFEIHSRLSQ 309
Query: 668 LYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGK 727
R + + F+ + I+ SDV RGMD+P+V V+QVG+P + EQY+HR+GRT R G
Sbjct: 310 SARTKTTALFKEAATGIMFASDVIGRGMDFPNVDLVIQVGLPSNGEQYVHRVGRTARAGN 369
Query: 728 EGEGVLLLAPWEEYFLDDLKDLPLDKLQLPH-----LNPEIQLQMD---NHMAKIDNNVK 779
+G ++LL E +F+ + LP+ PH +N D M I K
Sbjct: 370 DGRAIILLTEAESFFMKVNRHLPIQ----PHPQTDAINAGASSCADAVTKAMYSIGEETK 425
Query: 780 EAAYHAWLGYYNS---IREIGRDKTTLVELANKFA-QSIGLQRPPPLFRKTALKMGLKDI 835
+ AY +++G++ ++++ DK LV+LAN+ A Q +G PPP+ +K KMGLK +
Sbjct: 426 QRAYSSYIGFFAGSGLLKQVRLDKPGLVQLANELAIQGMGCPEPPPMDKKVVGKMGLKGV 485
Query: 836 PGI 838
PG
Sbjct: 486 PGF 488
>gi|118585848|sp|Q2UST1.1|MS116_ASPOR RecName: Full=ATP-dependent RNA helicase mss116, mitochondrial;
Flags: Precursor
gi|83765241|dbj|BAE55384.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|391868302|gb|EIT77520.1| ATP-dependent RNA helicase pitchoune [Aspergillus oryzae 3.042]
Length = 633
Score = 230 bits (587), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 165/483 (34%), Positives = 252/483 (52%), Gaps = 54/483 (11%)
Query: 391 IKALTAAGYIQMTRVQEATLSACLEGK-DAVVKAKTGTGKSIAFLLPAIEAVLKATSSST 449
++AL + MT VQ L+ + D +V+AKTGTGK++AFLLP + +L+ S+
Sbjct: 104 LQALKVMEFEYMTPVQHRVLTELPSWRSDCLVQAKTGTGKTLAFLLPTLHCLLQGHSA-- 161
Query: 450 TQLVPP---IYVLILCPTRELASQIAAEAIAL-------LKNHDGIGVLTLVGGTRFKVD 499
PP + +LI+ PTRELA QIA L L+ H +G G R
Sbjct: 162 ----PPRGQVAILIITPTRELAQQIAKSCDQLTSQLARPLECHIAVG-----GTARASAL 212
Query: 500 QRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIV 559
R ++ P ILVATPGRL D++ S + +L ++ L+LDEAD +L+ GF DV+ I+
Sbjct: 213 ARFMKGAP-SILVATPGRLKDYLSEPS-TAEKLSNIQTLILDEADTMLESGFLADVKRIL 270
Query: 560 DCLPRRR---QSLLFSATMPKEL------VLKREHTYIDTVGLGSVETPVKIKQSCLVAP 610
+P + Q + FSAT+P ++ VLK +T I T+ T ++ Q ++ P
Sbjct: 271 QLIPPKSTGWQGMCFSATVPPKVKDVVSVVLKPGYTSISTIEKNETPTHERVPQYHVLIP 330
Query: 611 HEL-HFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLRE--MKMNVREMYSRKPQ 667
F L LL I + K+IVF T + +L + + V E++SR Q
Sbjct: 331 SVADTFTTLASLLNLEIKNS--SKIIVFGVTANMVALFAAAFSQGLTPLKVFEIHSRLSQ 388
Query: 668 LYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGK 727
R + + F+ + I+ SDV RGMD+P+V V+QVG+P + EQY+HR+GRT R G
Sbjct: 389 SARTKTTALFKEAATGIMFASDVIGRGMDFPNVDLVIQVGLPSNGEQYVHRVGRTARAGN 448
Query: 728 EGEGVLLLAPWEEYFLDDLKDLPLDKLQLPH-----LNPEIQLQMD---NHMAKIDNNVK 779
+G ++LL E +F+ + LP+ PH +N D M I K
Sbjct: 449 DGRAIILLTEAESFFMKVNRHLPIQ----PHPQTDAINAGASSCADAVTKAMYSIGEETK 504
Query: 780 EAAYHAWLGYYNS---IREIGRDKTTLVELANKFA-QSIGLQRPPPLFRKTALKMGLKDI 835
+ AY +++G++ ++++ DK LV+LAN+ A Q +G PPP+ +K KMGLK +
Sbjct: 505 QRAYSSYIGFFAGSGLLKQVRLDKPGLVQLANELAIQGMGCPEPPPMDKKVVGKMGLKGV 564
Query: 836 PGI 838
PG
Sbjct: 565 PGF 567
>gi|221487985|gb|EEE26199.1| RNA helicase, putative [Toxoplasma gondii GT1]
Length = 385
Score = 230 bits (587), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 147/347 (42%), Positives = 206/347 (59%), Gaps = 20/347 (5%)
Query: 417 KDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLVPP--IYVLILCPTRELASQIAAE 474
+D++++A+TGTGK++ FLL IE +L L PP + L++ PTRELA+QI E
Sbjct: 7 RDSLIQARTGTGKTLCFLLAIIERLL---------LQPPSGVGALVIAPTRELATQILRE 57
Query: 475 AIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMG 534
A L+ H V LVGG K D+ L+ QILV TPGRLLDH+EN S L
Sbjct: 58 AEQLVTFHP-FDVAALVGGNSRKADELALKRKRPQILVCTPGRLLDHLENTFMFSALLER 116
Query: 535 LKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQSLLFSATMPKEL------VLKREHTYI 588
L++LVLDEAD L++LG ++++ I LPR RQSLLFSAT+P + + K+ + ++
Sbjct: 117 LQLLVLDEADRLMELGHLEELKQIFSYLPRTRQSLLFSATLPDNVRDLASRLFKQNYRFL 176
Query: 589 DTVGLGSVETPVKIKQSCLVAPHELHFQILHHLLKEHILGTP-DYKVIVFCSTGMVTSLL 647
+ V T ++ QS ++ + +L +LLKE P YK+IVF T +TS
Sbjct: 177 NCVAPDEKPTHERVAQSVVMHAAKETATVLFNLLKEEFERRPHSYKIIVFFPTARLTSFF 236
Query: 648 YLLLRE-MKMNVREMYSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQV 706
L RE ++ V E++ R+ R + F + +L +SDVSARG+DYPDV+ V+QV
Sbjct: 237 AALFREQFRIGVYEIHRRRESSARAATASRFSRDRAGVLFSSDVSARGVDYPDVSLVIQV 296
Query: 707 GIPPDREQYIHRLGRTGREGKEGEGVLLLAPWEEYFLDDLKDLPLDK 753
P RE YIHR+GRTGR KEG VLLL E FL+ ++DLPL +
Sbjct: 297 CAPLTRELYIHRVGRTGRIEKEGRAVLLLNEAETRFLELIQDLPLQQ 343
>gi|395844018|ref|XP_003794763.1| PREDICTED: probable ATP-dependent RNA helicase DDX10 isoform 1
[Otolemur garnettii]
Length = 869
Score = 230 bits (586), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 153/429 (35%), Positives = 237/429 (55%), Gaps = 33/429 (7%)
Query: 380 RFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIE 439
RF + +S T+K L A Y +T +Q T+ L+GKD + AKTG+GK++AFL+P +E
Sbjct: 70 RFSDFPLSRKTLKGLQEAQYRLVTEIQRQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLE 129
Query: 440 AVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVD 499
A+ + +ST L VLI+ PTRELA Q + KNHD L ++GG K +
Sbjct: 130 ALYRLQWTSTDGL----GVLIISPTRELAYQTFEVLRKVGKNHDFSAGL-IIGGKDLKQE 184
Query: 500 QRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIV 559
R+ + ILV TPGRLL H++ +S L+MLVLDEAD +LD+GF + I+
Sbjct: 185 AERINN--INILVCTPGRLLQHMDE--TVSFHATNLQMLVLDEADRILDMGFADTMNAII 240
Query: 560 DCLPRRRQSLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHEL 613
+ LPR+RQ+LLFSAT K L LK + Y+ TP ++Q+ +V +
Sbjct: 241 ENLPRKRQTLLFSATQTKSVKDLARLSLK-DPEYVWVHEKAKYSTPATLEQNYVVCELQQ 299
Query: 614 HFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK--MNVREMYSRKPQLYRD 671
+L L+ H+ K IVF S+ LY + ++ +++ ++ R+ Q+ R
Sbjct: 300 KISVLFSFLRSHL----KKKSIVFFSSCKEVQYLYRVFCRLRPGVSILALHGRQQQMRRM 355
Query: 672 RISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEG 731
+ EF + +L +D++ARG+D+P V V+Q P D YIHR GRT R ++GE
Sbjct: 356 EVYNEFVRKRAAVLFATDIAARGLDFPAVNWVLQFDCPEDANTYIHRAGRTARYKEDGEA 415
Query: 732 VLLLAPWEE-YFLDDL--KDLPLDKLQLPHLNPE----IQLQMDNHMAKIDNNVKEAAYH 784
+L+L P EE L L K +P+ +++ +NPE +Q +M++ +A+ D ++KE A
Sbjct: 416 LLILLPSEEKAMLQQLLQKKVPVKEIK---INPEKLVDVQKKMESILAQ-DQHLKERAQR 471
Query: 785 AWLGYYNSI 793
++ Y SI
Sbjct: 472 CFVSYIRSI 480
>gi|367045650|ref|XP_003653205.1| hypothetical protein THITE_2115357 [Thielavia terrestris NRRL 8126]
gi|347000467|gb|AEO66869.1| hypothetical protein THITE_2115357 [Thielavia terrestris NRRL 8126]
Length = 625
Score = 230 bits (586), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 184/516 (35%), Positives = 271/516 (52%), Gaps = 70/516 (13%)
Query: 380 RFDEC---GISPLTIKALT-AAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLL 435
RF+E G++ ++A+T Y MT VQ T+++ L GKD V +AKTGTGK++AFL+
Sbjct: 75 RFEELLQLGVTEQLVRAITEGMRYETMTDVQSLTINSALAGKDVVAQAKTGTGKTLAFLV 134
Query: 436 PAIEAVLKATSSSTTQLVPP--------------IYVLILCPTRELASQIAAEAIALLKN 481
P I+ ++ A Q PP I ++L PTRELA QIA EA L KN
Sbjct: 135 PIIQKII-AQQPRLAQ--PPRGHRWARDPPRCDDIRAIVLSPTRELAEQIAEEARRLCKN 191
Query: 482 HDGIGVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLD 541
G+ V T VGGT+ K R + C +LVATPGRL D +++ + + L LVLD
Sbjct: 192 -TGVTVQTAVGGTQKKSMLLRARREGCHLLVATPGRLRDLLDDPTS-GIDAPRLAALVLD 249
Query: 542 EADHLLDLGFRKDVENIVDCLPR----RRQSLLFSATMPKELV-LKREHT------YIDT 590
EAD +LD+GF+ +++ I LP RQ+LL+SAT+PK +V L R+ ++ T
Sbjct: 250 EADRMLDVGFQDELDAIFHILPTIEQCPRQTLLYSATLPKHVVSLARKFINPTNFEFVQT 309
Query: 591 VGLGSVETPVKIKQSCL-------VAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMV 643
V V T K+ Q + + P L +I+ H ++ TP +K IVF T
Sbjct: 310 VKADEVPTHEKVPQFIVPCRGFENLGPTLL--EIIRHHTEKADPSTP-FKAIVFLPTTAS 366
Query: 644 TSLLYLLLREMKMN------VREMYSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDY 697
+ L R ++ + + EM+SR Q R ++ FR + IL++SDVSARGMD+
Sbjct: 367 VTYYSHLFRHLRGDEPWMPKIFEMHSRLSQSTRTHNADAFRKATSAILISSDVSARGMDF 426
Query: 698 PDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLA----PWEEYFLDDLK------ 747
P+VT V+QV +P R+ YIHR+GRTGR GKEG+ LL++ P Y L L
Sbjct: 427 PNVTHVIQVHVPTTRDTYIHRIGRTGRAGKEGQAYLLVSDIEVPSARYLLPGLPIQRCTD 486
Query: 748 -DLPLDKLQLPHLNPEIQLQMDNHMAKIDNNV-KEAAYHAWLGYYNSIREIGRDKTTLV- 804
+ L ++ H P+ ++ K+ + V KE LG +S+ +K +V
Sbjct: 487 FESGLVDVRRAHRLPDTFEKIREAAKKVPHEVLKETYTSLLLGNMSSV-----EKQEMVD 541
Query: 805 ELANKFAQSIGLQRPPPLFRKTALKMGLKDIPGIRL 840
EL N + G++ PP + K LK L + G+R+
Sbjct: 542 ELNNMAKYTWGMEAPPAVSPK--LKRHLGRVRGLRI 575
>gi|13514831|ref|NP_004389.2| probable ATP-dependent RNA helicase DDX10 [Homo sapiens]
gi|76803554|sp|Q13206.2|DDX10_HUMAN RecName: Full=Probable ATP-dependent RNA helicase DDX10; AltName:
Full=DEAD box protein 10
gi|11414894|dbj|BAB18536.1| RNA helicase [Homo sapiens]
gi|60552874|gb|AAH91521.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 10 [Homo sapiens]
gi|62739421|gb|AAH93654.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 10 [Homo sapiens]
gi|62739423|gb|AAH93656.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 10 [Homo sapiens]
gi|119587526|gb|EAW67122.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 10, isoform CRA_a [Homo
sapiens]
gi|189054819|dbj|BAG37650.1| unnamed protein product [Homo sapiens]
Length = 875
Score = 230 bits (586), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 147/428 (34%), Positives = 238/428 (55%), Gaps = 32/428 (7%)
Query: 380 RFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIE 439
RF + +S T+K L A Y +T +Q+ T+ L+GKD + AKTG+GK++AFL+P +E
Sbjct: 70 RFSDFPLSKKTLKGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLE 129
Query: 440 AVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVD 499
A+ + +ST L VLI+ PTRELA Q + KNHD L ++GG K +
Sbjct: 130 ALYRLQWTSTDGL----GVLIISPTRELAYQTFEVLRKVGKNHDFSAGL-IIGGKDLKHE 184
Query: 500 QRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIV 559
R+ + ILV TPGRLL H++ +S L+MLVLDEAD +LD+GF + ++
Sbjct: 185 AERINN--INILVCTPGRLLQHMDE--TVSFHATDLQMLVLDEADRILDMGFADTMNAVI 240
Query: 560 DCLPRRRQSLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHEL 613
+ LP++RQ+LLFSAT K L LK Y+ TP ++Q+ +V +
Sbjct: 241 ENLPKKRQTLLFSATQTKSVKDLARLSLKNPE-YVWVHEKAKYSTPATLEQNYIVCELQQ 299
Query: 614 HFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK--MNVREMYSRKPQLYRD 671
+L+ L+ H+ K IVF S+ LY + ++ +++ ++ R+ Q+ R
Sbjct: 300 KISVLYSFLRSHL----KKKSIVFFSSCKEVQYLYRVFCRLRPGVSILALHGRQQQMRRM 355
Query: 672 RISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEG 731
+ EF + +L +D++ARG+D+P V V+Q P D YIHR GRT R ++GE
Sbjct: 356 EVYNEFVRKRAAVLFATDIAARGLDFPAVNWVLQFDCPEDANTYIHRAGRTARYKEDGEA 415
Query: 732 VLLLAPWEEYFLDDL--KDLPLDKLQLPHLNPE----IQLQMDNHMAKIDNNVKEAAYHA 785
+L+L P E+ + L K +P+ +++ +NPE +Q ++++ +A+ D ++KE A
Sbjct: 416 LLILLPSEKAMVQQLLQKKVPVKEIK---INPEKLIDVQKKLESILAQ-DQDLKERAQRC 471
Query: 786 WLGYYNSI 793
++ Y S+
Sbjct: 472 FVSYVRSV 479
>gi|1142710|gb|AAC50823.1| similar to DEAD box RNA helicases [Homo sapiens]
gi|1589113|prf||2210303A RNA helicase
Length = 875
Score = 230 bits (586), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 147/428 (34%), Positives = 238/428 (55%), Gaps = 32/428 (7%)
Query: 380 RFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIE 439
RF + +S T+K L A Y +T +Q+ T+ L+GKD + AKTG+GK++AFL+P +E
Sbjct: 70 RFSDFPLSKKTLKGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLE 129
Query: 440 AVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVD 499
A+ + +ST L VLI+ PTRELA Q + KNHD L ++GG K +
Sbjct: 130 ALYRLQWTSTDGL----GVLIISPTRELAYQTFEVLRKVGKNHDFSAGL-IIGGKDLKHE 184
Query: 500 QRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIV 559
R+ + ILV TPGRLL H++ +S L+MLVLDEAD +LD+GF + ++
Sbjct: 185 AERINN--INILVCTPGRLLQHMDE--TVSFHATDLQMLVLDEADRILDMGFADTMNAVI 240
Query: 560 DCLPRRRQSLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHEL 613
+ LP++RQ+LLFSAT K L LK Y+ TP ++Q+ +V +
Sbjct: 241 ENLPKKRQTLLFSATQTKSVKDLARLSLKNPE-YVWVHEKAKYSTPATLEQNYIVCELQQ 299
Query: 614 HFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK--MNVREMYSRKPQLYRD 671
+L+ L+ H+ K IVF S+ LY + ++ +++ ++ R+ Q+ R
Sbjct: 300 KISVLYSFLRSHL----KKKSIVFFSSCKEVQYLYRVFCRLRPGVSILALHGRQQQMRRM 355
Query: 672 RISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEG 731
+ EF + +L +D++ARG+D+P V V+Q P D YIHR GRT R ++GE
Sbjct: 356 EVYNEFVRKRAAVLFATDIAARGLDFPAVNWVLQFDCPEDANTYIHRAGRTARYKEDGEA 415
Query: 732 VLLLAPWEEYFLDDL--KDLPLDKLQLPHLNPE----IQLQMDNHMAKIDNNVKEAAYHA 785
+L+L P E+ + L K +P+ +++ +NPE +Q ++++ +A+ D ++KE A
Sbjct: 416 LLILLPSEKAMVQQLLQKKVPVKEIK---INPEKLIDVQKKLESILAQ-DQDLKERAQRC 471
Query: 786 WLGYYNSI 793
++ Y S+
Sbjct: 472 FVSYVRSV 479
>gi|332208126|ref|XP_003253149.1| PREDICTED: probable ATP-dependent RNA helicase DDX10 isoform 1
[Nomascus leucogenys]
Length = 872
Score = 229 bits (585), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 160/475 (33%), Positives = 255/475 (53%), Gaps = 46/475 (9%)
Query: 380 RFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIE 439
RF + +S T+K L A Y +T +Q+ T+ L+GKD + AKTG+GK++AFL+P +E
Sbjct: 70 RFSDFPLSKKTLKGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLE 129
Query: 440 AVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVD 499
A+ + +ST L VLI+ PTRELA Q + KNHD L ++GG K +
Sbjct: 130 ALYRLQWTSTDGL----GVLIISPTRELAYQTFEVLRKVGKNHDFSAGL-IIGGKDLKHE 184
Query: 500 QRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIV 559
R+ + ILV TPGRLL H++ +S L+MLVLDEAD +LD+GF + I+
Sbjct: 185 AERINN--INILVCTPGRLLQHMDE--TVSFHATDLQMLVLDEADRILDMGFADTMNAII 240
Query: 560 DCLPRRRQSLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHEL 613
+ LP++RQ+LLFSAT K L LK Y+ TP ++Q+ + +
Sbjct: 241 ENLPKKRQTLLFSATQTKSVKDLARLSLKNPE-YVWVHEKAKYSTPATLEQNYIFCELQQ 299
Query: 614 HFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK--MNVREMYSRKPQLYRD 671
+L+ L+ H+ K IVF S+ LY + ++ +++ ++ R+ Q+ R
Sbjct: 300 KVSVLYSFLRSHL----KKKSIVFFSSCKEVQYLYRVFCRLRPGVSILALHGRQQQMRRM 355
Query: 672 RISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEG 731
+ EF + +L +D++ARG+D+P V V+Q P D YIHR GRT R ++GE
Sbjct: 356 EVYNEFVRKRAAVLFATDIAARGLDFPAVNWVLQFDCPEDANTYIHRAGRTARYKEDGEA 415
Query: 732 VLLLAPWEEYFLDDL--KDLPLDKLQLPHLNPE----IQLQMDNHMAKIDNNVKEAAYHA 785
+L+L P E+ + L K +P+ +++ +NPE +Q ++++ +A+ D ++KE A
Sbjct: 416 LLILLPSEKAMVQQLLQKKVPVKEIK---INPERLIDVQKKLESFLAQ-DQDLKERAQRC 471
Query: 786 WLGYYNSIREIGRDKTTLVELANKFAQSIGLQRPPPLFRKTALKMGLKDIPGIRL 840
++ Y S+ + +DK F S + P P + AL +GL P IR
Sbjct: 472 FISYIRSVY-LMKDKEV-------FDVS---KLPIPEY---ALSLGLAVAPRIRF 512
>gi|114640235|ref|XP_001141618.1| PREDICTED: probable ATP-dependent RNA helicase DDX10 [Pan
troglodytes]
gi|410221128|gb|JAA07783.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 10 [Pan troglodytes]
gi|410260526|gb|JAA18229.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 10 [Pan troglodytes]
gi|410287964|gb|JAA22582.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 10 [Pan troglodytes]
gi|410335061|gb|JAA36477.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 10 [Pan troglodytes]
Length = 875
Score = 229 bits (585), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 160/475 (33%), Positives = 256/475 (53%), Gaps = 46/475 (9%)
Query: 380 RFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIE 439
RF + +S T+K L A Y +T +Q+ T+ L+GKD + AKTG+GK++AFL+P +E
Sbjct: 70 RFSDFPLSKKTLKGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLE 129
Query: 440 AVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVD 499
A+ + +ST L VLI+ PTRELA Q + KNHD L ++GG K +
Sbjct: 130 ALYRLQWTSTDGL----GVLIISPTRELAYQTFEVLRKVGKNHDFSAGL-IIGGKDLKHE 184
Query: 500 QRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIV 559
R+ + ILV TPGRLL H++ +S L+MLVLDEAD +LD+GF + ++
Sbjct: 185 AERINN--INILVCTPGRLLQHMDE--TVSFHATDLQMLVLDEADRILDMGFADTMNAVI 240
Query: 560 DCLPRRRQSLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHEL 613
+ LP++RQ+LLFSAT K L LK Y+ TP ++Q+ +V +
Sbjct: 241 ENLPKKRQTLLFSATQTKSVKDLARLSLKNPE-YVWVHEKAKYSTPATLEQNYIVCELKQ 299
Query: 614 HFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK--MNVREMYSRKPQLYRD 671
+L+ L+ H+ K IVF S+ LY + ++ +++ ++ R+ Q+ R
Sbjct: 300 KISVLYSFLRSHL----KKKSIVFFSSCKEVQYLYRVFCRLRPGVSILALHGRQQQMRRM 355
Query: 672 RISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEG 731
+ EF + +L +D++ARG+D+P V V+Q P D YIHR GRT R ++GE
Sbjct: 356 EVYNEFVRKRAAVLFATDIAARGLDFPAVNWVLQFDCPEDANTYIHRAGRTARYKEDGEA 415
Query: 732 VLLLAPWEEYFLDDL--KDLPLDKLQLPHLNPE----IQLQMDNHMAKIDNNVKEAAYHA 785
+L+L P E+ + L K +P+ +++ +NPE +Q ++++ +A+ D ++KE A
Sbjct: 416 LLILLPSEKAMVQQLLQKKVPVKEIK---INPEKLIDVQKKLESILAQ-DQDLKERAQRC 471
Query: 786 WLGYYNSIREIGRDKTTLVELANKFAQSIGLQRPPPLFRKTALKMGLKDIPGIRL 840
++ Y S+ + +DK F S + P P + AL +GL P IR
Sbjct: 472 FVSYVRSVY-LMKDKEV-------FDVS---KLPIPEY---ALSLGLAVAPRIRF 512
>gi|332025244|gb|EGI65418.1| Putative ATP-dependent RNA helicase DDX10 [Acromyrmex echinatior]
Length = 795
Score = 229 bits (585), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 154/477 (32%), Positives = 255/477 (53%), Gaps = 42/477 (8%)
Query: 380 RFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIE 439
+F + +S +T+K+LT Y++MT +Q+ ++ L+G D + AKTG+GK++AFL+P +E
Sbjct: 41 KFSDLPLSRVTLKSLTENNYVEMTDIQKQSIGLALQGNDILGAAKTGSGKTLAFLIPILE 100
Query: 440 AVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVD 499
+ T+L + LI+ PTRELA QI E + + + I ++GG K +
Sbjct: 101 ILY---CKQWTRL-DGLGSLIITPTRELAYQIY-ETLRKVGQYHSISAGLIIGGKDLKFE 155
Query: 500 QRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIV 559
++R+ D C +++ TPGRLL H++ + + +++LVLDEAD LD+GF K + +I+
Sbjct: 156 KKRM--DQCNVIICTPGRLLQHMDENPLFNC--VNMQILVLDEADRCLDMGFEKTMNSII 211
Query: 560 DCLPRRRQSLLFSATMPKEL-----VLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELH 614
+ LP +RQ+LLFSAT K + + ++ Y+ + TP ++QS ++ E
Sbjct: 212 ENLPPKRQTLLFSATQTKSVKDLARLSLKDPLYVSVHEHSAHTTPEGLQQSYIICSLEDK 271
Query: 615 FQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK--MNVREMYSRKPQLYRDR 672
+L ++ H+ K+IVF S+ +Y ++ +++ +Y QL R
Sbjct: 272 LAMLWSFIRNHV----KQKIIVFFSSCKQVKYIYEAFCRLRPGISLLALYGTLHQLRRMN 327
Query: 673 ISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGV 732
I E F + +L +D++ARG+D+P V VVQ+ P D YIHR GRT R GE +
Sbjct: 328 IYESFCKKQHAVLFATDIAARGLDFPTVNWVVQMDCPEDVNAYIHRAGRTARFKSGGESL 387
Query: 733 LLLAPWEEYFLDDLKD--LPL-------DKLQLPHLNPEIQLQMDNHMAKIDNNVKEAAY 783
L+L P EE ++ LK +P+ +KLQ PH E L D +KE A
Sbjct: 388 LVLLPSEEMIIERLKQRKIPINMIKINPNKLQSPHRKLEALLAR-------DVTLKETAQ 440
Query: 784 HAWLGYYNSIREIGRDKTTLVELA---NKFAQSIGLQRPPPL--FRKTALKMGLKDI 835
A++ Y S+ + +DK A ++FA+S+GL PP + ++ KM D+
Sbjct: 441 RAFVSYIKSVF-LMKDKEIFNVHALNTDEFAKSLGLAIPPRIRFLQRMQKKMSSNDV 496
>gi|62089354|dbj|BAD93121.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 10 variant [Homo sapiens]
Length = 845
Score = 229 bits (584), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 147/428 (34%), Positives = 238/428 (55%), Gaps = 32/428 (7%)
Query: 380 RFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIE 439
RF + +S T+K L A Y +T +Q+ T+ L+GKD + AKTG+GK++AFL+P +E
Sbjct: 80 RFSDFPLSKKTLKGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLE 139
Query: 440 AVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVD 499
A+ + +ST L VLI+ PTRELA Q + KNHD L ++GG K +
Sbjct: 140 ALYRLQWTSTDGLG----VLIISPTRELAYQTFEVLRKVGKNHDFSAGL-IIGGKDLKHE 194
Query: 500 QRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIV 559
R+ + ILV TPGRLL H++ +S L+MLVLDEAD +LD+GF + ++
Sbjct: 195 AERINN--INILVCTPGRLLQHMDE--TVSFHATDLQMLVLDEADRILDMGFADTMNAVI 250
Query: 560 DCLPRRRQSLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHEL 613
+ LP++RQ+LLFSAT K L LK Y+ TP ++Q+ +V +
Sbjct: 251 ENLPKKRQTLLFSATQTKSVKDLARLSLKNPE-YVWVHEKAKYSTPATLEQNYIVCELQQ 309
Query: 614 HFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK--MNVREMYSRKPQLYRD 671
+L+ L+ H+ K IVF S+ LY + ++ +++ ++ R+ Q+ R
Sbjct: 310 KISVLYSFLRSHL----KKKSIVFFSSCKEVQYLYRVFCRLRPGVSILALHGRQQQMRRM 365
Query: 672 RISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEG 731
+ EF + +L +D++ARG+D+P V V+Q P D YIHR GRT R ++GE
Sbjct: 366 EVYNEFVRKRAAVLFATDIAARGLDFPAVNWVLQFDCPEDANTYIHRAGRTARYKEDGEA 425
Query: 732 VLLLAPWEEYFLDDL--KDLPLDKLQLPHLNPE----IQLQMDNHMAKIDNNVKEAAYHA 785
+L+L P E+ + L K +P+ +++ +NPE +Q ++++ +A+ D ++KE A
Sbjct: 426 LLILLPSEKAMVQQLLQKKVPVKEIK---INPEKLIDVQKKLESILAQ-DQDLKERAQRC 481
Query: 786 WLGYYNSI 793
++ Y S+
Sbjct: 482 FVSYVRSV 489
>gi|299740208|ref|XP_001838965.2| RNA helicase [Coprinopsis cinerea okayama7#130]
gi|298404137|gb|EAU82896.2| RNA helicase [Coprinopsis cinerea okayama7#130]
Length = 726
Score = 229 bits (584), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 179/514 (34%), Positives = 263/514 (51%), Gaps = 75/514 (14%)
Query: 390 TIKALTAA--GYIQMTRVQEATL----------SACLEGKDAVVKAKTGTGKSIAFLLPA 437
T+KALT + Y M+ VQ L + E KD +VKA+TGTGK+IAFL+PA
Sbjct: 95 TLKALTQSPFQYNHMSVVQAEVLPLLPGLAQPRAENPESKDLLVKARTGTGKTIAFLVPA 154
Query: 438 IEAVLK-----ATSSSTTQ---LVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLT 489
+EA +K A Q + + L++ PTRELA+QI EA L +H G V
Sbjct: 155 LEARVKQLEDVAPGDRRVQHRYAMDNVGALVISPTRELATQIVQEAQKLTTHHPGYQVPM 214
Query: 490 LVGGTRFKVDQRR----LESDPCQILVATPGRLLDHI-ENKSGLSVRLMGLKMLVLDEAD 544
VGG +D+RR + ILVATPGRL+D + +++SG++ L KML+LDEAD
Sbjct: 215 FVGG----LDKRRQLEAFQRGRKDILVATPGRLMDMLTDSRSGVAQTLKNTKMLILDEAD 270
Query: 545 HLLDLGFRKDVENIVDCLPRR--RQSLLFSATMPKELV------LKREHTYIDTVGLGSV 596
LLD+GFR D+E I+ LP RQ+LLFSAT+ ++ L +I+ V +
Sbjct: 271 TLLDMGFRDDIEAIMRYLPDTTIRQTLLFSATVSPQIQQIAQRHLSENQLFINCVSDDTS 330
Query: 597 ETPVKIKQ--SCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREM 654
I Q + + +P + +L + ++ + K+I+F T +T LL +L E+
Sbjct: 331 PVHAHIPQYHTIIPSPKDQIPHVLRLIFQDQLEHGDKSKIIIFLPTTKMTQLLSTILYEL 390
Query: 655 --------KMNVREMYSRKPQLYRDRISEEFRASKRL-ILVTSDVSARGMDYPDVTSVVQ 705
+ E++S+K R S FR S R ILVTSDVSARG+DYP VT V+Q
Sbjct: 391 STASFPMTRTYTYEIHSKKSMSGRTSASNGFRKSNRASILVTSDVSARGVDYPGVTRVIQ 450
Query: 706 VGIPPDREQYIHRLGRTGREGKE-GEGVLLLAPWEEYFLD-DLKDLPLDKLQLPHLNPEI 763
+G+P EQY+HR+GRTGR G G G L++A WE F+ +L +PL L + L E+
Sbjct: 451 LGLPSKPEQYVHRVGRTGRGGSNIGRGDLVIAAWEHEFVKRNLSHIPLKPLTVKDLREEV 510
Query: 764 QLQMD--------NH---------------MAKIDNNVKEAAYHAWLGYYNSIREIGR-- 798
+ + +H +A++D + LG+Y S+ R
Sbjct: 511 ESSLQPKVEGGKPHHGLIRYQDLERNTSEVLARLDEGAVSETMMSLLGFYVSMISQLRAS 570
Query: 799 DKTTLVELANKFAQSIGLQRPPPLFRKTALKMGL 832
+ L E+ + Q +GL + P + K+GL
Sbjct: 571 PEQVLKEMQDWTTQGLGLTKAPYVSAGFLQKIGL 604
>gi|397516334|ref|XP_003828385.1| PREDICTED: probable ATP-dependent RNA helicase DDX10 [Pan paniscus]
Length = 904
Score = 229 bits (584), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 160/475 (33%), Positives = 256/475 (53%), Gaps = 46/475 (9%)
Query: 380 RFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIE 439
RF + +S T+K L A Y +T +Q+ T+ L+GKD + AKTG+GK++AFL+P +E
Sbjct: 98 RFSDFPLSKKTLKGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLE 157
Query: 440 AVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVD 499
A+ + +ST L VLI+ PTRELA Q + KNHD L ++GG K +
Sbjct: 158 ALYRLQWTSTDGL----GVLIISPTRELAYQTFEVLRKVGKNHDFSAGL-IIGGKDLKHE 212
Query: 500 QRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIV 559
R+ + ILV TPGRLL H++ +S L+MLVLDEAD +LD+GF + ++
Sbjct: 213 AERINN--INILVCTPGRLLQHMDE--TVSFHATDLQMLVLDEADRILDMGFADTMNAVI 268
Query: 560 DCLPRRRQSLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHEL 613
+ LP++RQ+LLFSAT K L LK Y+ TP ++Q+ +V +
Sbjct: 269 ENLPKKRQTLLFSATQTKSVKDLARLSLKNPE-YVWVHEKAKYSTPATLEQNYIVCELKQ 327
Query: 614 HFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK--MNVREMYSRKPQLYRD 671
+L+ L+ H+ K IVF S+ LY + ++ +++ ++ R+ Q+ R
Sbjct: 328 KISVLYSFLRSHL----KKKSIVFFSSCKEVQYLYRVFCRLRPGVSILALHGRQQQMRRM 383
Query: 672 RISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEG 731
+ EF + +L +D++ARG+D+P V V+Q P D YIHR GRT R ++GE
Sbjct: 384 EVYNEFVRKRAAVLFATDIAARGLDFPAVNWVLQFDCPEDANTYIHRAGRTARYKEDGEA 443
Query: 732 VLLLAPWEEYFLDDL--KDLPLDKLQLPHLNPE----IQLQMDNHMAKIDNNVKEAAYHA 785
+L+L P E+ + L K +P+ +++ +NPE +Q ++++ +A+ D ++KE A
Sbjct: 444 LLILLPSEKAMVQQLLQKKVPVKEIK---INPEKLIDVQKKLESILAQ-DQDLKERAQRC 499
Query: 786 WLGYYNSIREIGRDKTTLVELANKFAQSIGLQRPPPLFRKTALKMGLKDIPGIRL 840
++ Y S+ + +DK F S + P P + AL +GL P IR
Sbjct: 500 FVSYVRSVY-LMKDKEV-------FDVS---KLPIPEY---ALSLGLAVAPRIRF 540
>gi|310792240|gb|EFQ27767.1| DEAD/DEAH box helicase [Glomerella graminicola M1.001]
Length = 643
Score = 229 bits (583), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 181/575 (31%), Positives = 287/575 (49%), Gaps = 68/575 (11%)
Query: 320 ASLGKYDMKITKRVPLKSLEDEHDFEEQVELIRKEISKNKLNGNGEKKEK--------RE 371
AS ++ T+ V LKS+ + +R +S N + +
Sbjct: 15 ASFATPSLRTTRPVTLKSIA-----QSSQSTLRAPVSINAFRRYSSEAAAAVAADPAAKT 69
Query: 372 EEPILSQKRFDEC---GISPLTIKALT-AAGYIQMTRVQEATLSACLEGKDAVVKAKTGT 427
+EP RF + G+ + +T Y M+ VQ T+ L+G D V +AKTGT
Sbjct: 70 QEPSGPTTRFADLRKLGVHSSLVSTITDGMKYETMSEVQSKTIEPALKGMDLVAQAKTGT 129
Query: 428 GKSIAFLLPAIEAVLKATSSSTTQLV------PPIYVLILCPTRELASQIAAEAIALLKN 481
GK++AFL+P ++ +L A S T+ I +I+ PTRELA QIA EA L N
Sbjct: 130 GKTLAFLIPLLQRMLAADPSLATRRARFSADSTDIRGIIISPTRELAEQIAVEAGKLCAN 189
Query: 482 HDGIGVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIEN-KSGLSVRLMGLKMLVL 540
G+ V VGGTR R+ + + C +LV TPGRL D + + SG+S L +VL
Sbjct: 190 -TGLVVQCAVGGTRRNEMLRKTQREGCHLLVGTPGRLNDLLSDPHSGISA--PNLAAIVL 246
Query: 541 DEADHLLDLGFRKDVENIVDCLP----RRRQSLLFSATMPKELV-LKREHT------YID 589
DEAD +LD+GF +++++IV LP +RQ+LLFSAT+PK ++ L R+ +I
Sbjct: 247 DEADRMLDVGFERELQDIVSQLPDPHTSQRQTLLFSATIPKNVIALARQWVRADNFDFIQ 306
Query: 590 TVGLGSVETPVKIKQSCLVAPHELHF-QILHHLLKEHI---LGTPD---YKVIVFCSTGM 642
TV V T K+ Q + + + L+++ + P+ +K +VF T
Sbjct: 307 TVSADEVLTHEKVPQHVVKCRGWANLIPTFYELMEKEVEKRRNNPEMMPFKALVFLPTSA 366
Query: 643 VTSLLYLLLREMKMNVREM-----YSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDY 697
L+ + ++M+ N + +++ Q R S +FR ++ IL ++DV+ARG+D+
Sbjct: 367 FVDLVADVDQKMRFNRDRIMGWRIHAKLTQAQRTTASNKFRDARSGILFSTDVTARGLDF 426
Query: 698 PDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLAPWEEYFL--DDLKDLPLDKL- 754
P+VT V+Q+G P DR+QYIHRLGRTGR KEGEG LL+ P E L +L LP+ +
Sbjct: 427 PNVTHVIQIGCPSDRQQYIHRLGRTGRADKEGEGWLLM-PESETGLARSELAGLPIKAIT 485
Query: 755 -----QLPHLNPEIQLQMDNHMAKIDNNVKE----AAYHAWLGYYNSIREIGRDKTTLVE 805
+ E+ ++ + + + ++E AAY + G + +G + E
Sbjct: 486 DIEAAEFDFTGQELPSELTTKVTEATSQLREQTLNAAYLSLFG-----QRVGDVQKKADE 540
Query: 806 LANKFAQSIGLQRPPPLFRKTALKMGLKDIPGIRL 840
L F ++ + P + A GL++I GI +
Sbjct: 541 LKEWFVHAMKMDNTPAISASIAQTRGLRNIRGINI 575
>gi|171690426|ref|XP_001910138.1| hypothetical protein [Podospora anserina S mat+]
gi|170945161|emb|CAP71272.1| unnamed protein product [Podospora anserina S mat+]
Length = 664
Score = 229 bits (583), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 173/508 (34%), Positives = 265/508 (52%), Gaps = 59/508 (11%)
Query: 381 FDECGISPLTIKALT-AAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIE 439
+ G+ ++++T Y MT VQ T++A L GKD V +AKTGTGK++AFL+P ++
Sbjct: 77 LESLGVHNALVRSITEGMRYEDMTEVQSLTINAALAGKDLVAQAKTGTGKTLAFLVPILQ 136
Query: 440 AVLKATSSSTTQLVP------PIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGG 493
++ + P + +++ PTRELA QIA EA ++K GI V T VGG
Sbjct: 137 KIIADQPALAEARRPVKARSDDVRAIVISPTRELAEQIAVEAAKIVKG-TGIKVQTAVGG 195
Query: 494 TRFKVDQRRLESDPCQILVATPGRLLDHIENK-SGLSVRLMGLKMLVLDEADHLLDLGFR 552
T+ ++ +++ + C +LV TPGRL D + ++ SG++ L L LDEAD +LD+GF
Sbjct: 196 TQKRMSLQKIRYEGCHLLVGTPGRLADLLTDEYSGVAA--PNLTALCLDEADRMLDVGFD 253
Query: 553 KDVENIVDCLPRR----RQSLLFSATMPKELV-LKREHTYIDTVG------LGSVETPVK 601
+++ I+ LP R RQ+LL+SATMPK++V L R+ YID + S ETP
Sbjct: 254 AELDTILKALPNRKDTPRQTLLYSATMPKDVVGLARK--YIDPTNFEFAQTVKSNETPTH 311
Query: 602 IKQSCLVAPHELH-------FQILHHLL---KEHILGTPDYKVIVFCSTGMVTSLLYLLL 651
+ + P F+++ + ++ + G P K++VF T
Sbjct: 312 ERVPQFIVPCRSFDTMPATLFEMIRTWVAKNRDELEGNP-LKMMVFLPTTASVISWSAAF 370
Query: 652 REMKMN------VREMYSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQ 705
R ++ VR+++S+ Q R R +E+FR +K IL +SDV+ARGMD+P+VT VVQ
Sbjct: 371 RRLRREFPDIPEVRDIHSKLTQPIRTRCAEDFRRAKSAILFSSDVTARGMDFPNVTHVVQ 430
Query: 706 VGIPPDREQYIHRLGRTGREGKEGEGVLLLAPWE-EYFLDDLKDLPLDK--------LQL 756
V P DR+ YIHR+GRTGR GKEGE LL++ E L LP+ + L
Sbjct: 431 VHTPNDRDSYIHRIGRTGRAGKEGEAWLLVSDSEVSTARSRLPGLPIKRSTDFAVASTDL 490
Query: 757 PHLNPEIQLQMDNHMAKIDNNVKEAAYHAWLGYYNSI---REIGRDKTTLVELANKFAQS 813
PE + + ++ + Y YY S G K +V+ N F+++
Sbjct: 491 YGAEPE---SFPDSVKRVREAFSKLPYETISEYYKSFLGGALQGVHKQAVVDELNTFSKN 547
Query: 814 I-GLQRPPPLFRKTALKMGLKDIPGIRL 840
I GL +PP + MG I G+R+
Sbjct: 548 IFGLDQPPGVSPSLMRNMG--RITGLRV 573
>gi|270001921|gb|EEZ98368.1| hypothetical protein TcasGA2_TC000825 [Tribolium castaneum]
Length = 629
Score = 229 bits (583), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 164/472 (34%), Positives = 259/472 (54%), Gaps = 33/472 (6%)
Query: 375 ILSQKRFDECG--ISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIA 432
ILS FD + T+KA+ G+ +T +Q ++ LEG+D V AKTG+GK++A
Sbjct: 124 ILSNCTFDSLKNKVCENTLKAIADMGFTTLTEIQARSIPPLLEGRDLVGAAKTGSGKTLA 183
Query: 433 FLLPAIEAVLKATSSSTTQLVP--PIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTL 490
FL+PA+E + K + +P V+I+ PTREL+ Q L+K H L +
Sbjct: 184 FLIPAVELIYK------LKFMPRNGTGVIIISPTRELSMQTFGVLKELMKYHHHTYGLVM 237
Query: 491 VGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLG 550
GGT + + ++L S ILVATPGRLLDH++N + L+ LV+DEAD +LD+G
Sbjct: 238 -GGTSRQTEAQKL-SKGINILVATPGRLLDHMQNTPDFLFK--NLQCLVIDEADRILDIG 293
Query: 551 FRKDVENIVDCLPRRRQSLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQ 604
F ++++ I++ LP+RRQ++LFSAT K+ L LK+E Y+ S T ++Q
Sbjct: 294 FEEEMKQIINLLPKRRQTMLFSATQTKKTEALTSLALKKEPIYVGVDDAKSEATVTGLEQ 353
Query: 605 SCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSR 664
+V P E +L LK++ KV+VF S+ M + L + + V ++ +
Sbjct: 354 GYVVCPSEKRLLVLFTFLKKN----RKKKVMVFFSSCMSVKFHHELFNYIDLPVMCIHGK 409
Query: 665 KPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGR 724
+ Q R +F ++ IL+ +DV+ARG+D P V +VQ P D ++YIHR+GRT R
Sbjct: 410 QKQAKRTTTFFQFCNAESGILLCTDVAARGLDIPAVDWIVQYDPPDDPKEYIHRVGRTAR 469
Query: 725 -EGKEGEGVLLLAPWEEYFLDDLKD--LPLDKLQLP-HLNPEIQLQMDNHMAK---IDNN 777
EG G +L+L P E FL LK +PL++ + + +IQLQ++N + K ++ +
Sbjct: 470 GEGSSGHALLILRPEELGFLRYLKQAKVPLNEFEFSWNKIADIQLQLENLIGKNYFLNMS 529
Query: 778 VKEAAYHAWLGYYNSIREIGRDKTTLVELANKFAQSIGLQRPPPLFRKTALK 829
KE A+ A++ Y+S + ++LA K S G + PP + K +K
Sbjct: 530 AKE-AFKAYVRAYDSHHLKTIFDISTLDLA-KVGLSFGFKVPPAVDLKVTVK 579
>gi|426370364|ref|XP_004052135.1| PREDICTED: probable ATP-dependent RNA helicase DDX10 [Gorilla
gorilla gorilla]
Length = 846
Score = 228 bits (582), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 160/475 (33%), Positives = 256/475 (53%), Gaps = 46/475 (9%)
Query: 380 RFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIE 439
RF + +S T+K L A Y +T +Q+ T+ L+GKD + AKTG+GK++AFL+P +E
Sbjct: 44 RFSDFPLSKKTLKGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLE 103
Query: 440 AVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVD 499
A+ + +ST L VLI+ PTRELA Q + KNHD L ++GG K +
Sbjct: 104 ALYRLQWTSTDGL----GVLIISPTRELAYQTFEVLRKVGKNHDFSAGL-IIGGKDLKHE 158
Query: 500 QRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIV 559
R+ + ILV TPGRLL H++ +S L+MLVLDEAD +LD+GF + ++
Sbjct: 159 AERINN--INILVCTPGRLLQHMDE--TVSFHATDLQMLVLDEADRILDMGFADTMNAVI 214
Query: 560 DCLPRRRQSLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHEL 613
+ LP++RQ+LLFSAT K L LK Y+ TP ++Q+ +V +
Sbjct: 215 ENLPKKRQTLLFSATQTKSVKDLARLSLKNPE-YVWVHEKAKYSTPATLEQNYIVCELKQ 273
Query: 614 HFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK--MNVREMYSRKPQLYRD 671
+L+ L+ H+ K IVF S+ LY + ++ +++ ++ R+ Q+ R
Sbjct: 274 KISVLYSFLRSHL----KKKSIVFFSSCKEVQYLYRVFCRLRPGVSILALHGRQQQMRRM 329
Query: 672 RISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEG 731
+ EF + +L +D++ARG+D+P V V+Q P D YIHR GRT R ++GE
Sbjct: 330 EVYNEFVRKRAAVLFATDIAARGLDFPAVNWVLQFDCPEDANTYIHRAGRTARYKEDGEA 389
Query: 732 VLLLAPWEEYFLDDL--KDLPLDKLQLPHLNPE----IQLQMDNHMAKIDNNVKEAAYHA 785
+L+L P E+ + L K +P+ +++ +NPE +Q ++++ +A+ D ++KE A
Sbjct: 390 LLILLPSEKAMVQQLLQKKVPVKEIK---INPEKLIDVQKKLESILAQ-DQDLKERAQRC 445
Query: 786 WLGYYNSIREIGRDKTTLVELANKFAQSIGLQRPPPLFRKTALKMGLKDIPGIRL 840
++ Y S+ + +DK F S + P P + AL +GL P IR
Sbjct: 446 FVSYVRSVY-LMKDKEV-------FDVS---KLPIPEY---ALSLGLAVAPRIRF 486
>gi|73955178|ref|XP_536583.2| PREDICTED: probable ATP-dependent RNA helicase DDX10 [Canis lupus
familiaris]
Length = 871
Score = 228 bits (582), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 159/461 (34%), Positives = 252/461 (54%), Gaps = 41/461 (8%)
Query: 380 RFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIE 439
RF + +S T+K L A Y +T +Q+ T+ L+GKD + AKTG+GK++AFL+P +E
Sbjct: 70 RFSDFPLSKKTLKGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLE 129
Query: 440 AVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVD 499
A+ + +ST L VLI+ PTRELA Q + KNHD L ++GG K +
Sbjct: 130 ALYRLQWTSTDGL----GVLIISPTRELAYQTFEVLRKVGKNHDFSAGL-IIGGKDLKHE 184
Query: 500 QRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIV 559
R+ + ILV TPGRLL H++ + L+MLVLDEAD +LD+GF + I+
Sbjct: 185 AERINN--INILVCTPGRLLQHMDE--TICFHATNLQMLVLDEADRILDMGFADTMNAII 240
Query: 560 DCLPRRRQSLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHEL 613
+ LP++RQ+LLFSAT K L LK YI TP ++Q+ +V +
Sbjct: 241 ENLPKKRQTLLFSATQTKSVKDLARLSLKNPE-YIWVHEKAKYSTPATLEQNYIVCELQQ 299
Query: 614 HFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK--MNVREMYSRKPQLYRD 671
+L+ L+ H+ K IVF S+ LY + ++ +++ ++ R+ Q+ R
Sbjct: 300 KISVLYSFLRSHL----KKKSIVFFSSCKEVQYLYRVFCRLRPGISILALHGRQQQMRRM 355
Query: 672 RISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEG 731
+ EF + +L +D++ARG+D+P V V+Q P D YIHR GRT R ++GE
Sbjct: 356 EVYNEFVRKRSAVLFATDIAARGLDFPAVNWVLQFDCPEDANTYIHRAGRTARYKEDGEA 415
Query: 732 VLLLAPWEEY-FLDDL--KDLPLDKLQLPHLNPE----IQLQMDNHMAKIDNNVKEAAYH 784
+L+L P EE + L K +P+ +++ +NPE +Q ++++ +A+ D ++KE A
Sbjct: 416 LLILLPSEEKGMVQQLLQKKVPVKEIK---INPEKLIDVQKKLESFLAQ-DKDLKERAQR 471
Query: 785 AWLGYYNSI-----REIGRDKTTLVELANKFAQSIGLQRPP 820
++ Y S+ +EI D +TL ++A S+GL P
Sbjct: 472 CFVSYIRSVYLMKNKEIF-DVSTLP--VPEYALSLGLAVAP 509
>gi|350424364|ref|XP_003493771.1| PREDICTED: probable ATP-dependent RNA helicase DDX10-like [Bombus
impatiens]
Length = 784
Score = 228 bits (582), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 150/453 (33%), Positives = 248/453 (54%), Gaps = 26/453 (5%)
Query: 380 RFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIE 439
+F + +SP T+K LT YI MT +Q ++ L G D + AKTG+GK++AFL+P +E
Sbjct: 40 KFTDLPLSPKTLKGLTENNYIAMTDIQRQSIGLALRGNDILGAAKTGSGKTLAFLIPVLE 99
Query: 440 AVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVD 499
+ T+L + L++ PTRELA QI E + + H I ++GG K +
Sbjct: 100 ILY---CKQWTRL-DGLGALVITPTRELAYQIY-ETLRKVGRHHDISAGLIIGGKDLKFE 154
Query: 500 QRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIV 559
+RR+ D C I++ TPGRLL H++ + +++LVLDEAD LD+GF + + +I+
Sbjct: 155 KRRM--DQCNIVICTPGRLLQHMDENPLFDC--INMQVLVLDEADRCLDMGFEQTMNSII 210
Query: 560 DCLPRRRQSLLFSATMPKEL-----VLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELH 614
+ LP +RQ+LLFSAT K + + ++ Y+ + TP ++QS +V E
Sbjct: 211 ENLPPKRQTLLFSATQTKSVRDLARLSLKDPMYVSVHEHATHTTPEALEQSYVVCALEDK 270
Query: 615 FQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK--MNVREMYSRKPQLYRDR 672
+L ++ H+ K+IVF S+ ++ +L ++ +++ +Y QL R
Sbjct: 271 VSMLWSFIRNHL----KQKIIVFFSSCKQVKYIFEVLCRLRPGISLLALYGTLHQLRRME 326
Query: 673 ISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGV 732
I E F + +L +D++ARG+D+P V VVQ+ P D YIHR GRT R + GE +
Sbjct: 327 IYETFCKKQSAVLFATDIAARGLDFPAVDWVVQMDCPEDVNAYIHRAGRTARFQRNGECL 386
Query: 733 LLLAPWEEYFLDDLKD--LPLDKLQL-PHLNPEIQLQMDNHMAKIDNNVKEAAYHAWLGY 789
L+L P EE ++ LK+ +P+ +Q+ P+ Q +++ +A+ D +KE+A ++ Y
Sbjct: 387 LVLLPSEEKMIEKLKERKIPISMIQINPNKLQSPQRKIEALLAR-DVLLKESAQRGFVSY 445
Query: 790 YNSIREIGRDKTTLVELANK--FAQSIGLQRPP 820
S+ + + V N FA+S+GL PP
Sbjct: 446 IKSVFLMKDKEVFNVRALNTDLFARSLGLAIPP 478
>gi|238482443|ref|XP_002372460.1| DEAD box ATP-dependent RNA helicase, putative [Aspergillus flavus
NRRL3357]
gi|220700510|gb|EED56848.1| DEAD box ATP-dependent RNA helicase, putative [Aspergillus flavus
NRRL3357]
Length = 539
Score = 228 bits (582), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 164/483 (33%), Positives = 252/483 (52%), Gaps = 54/483 (11%)
Query: 391 IKALTAAGYIQMTRVQEATLSACLEGK-DAVVKAKTGTGKSIAFLLPAIEAVLKATSSST 449
++AL + MT VQ L+ + D +V+AKTGTGK++AFLLP + +L+ S+
Sbjct: 10 LQALKVMEFEYMTPVQHRVLTELPSWRSDCLVQAKTGTGKTLAFLLPTLHCLLQGHSA-- 67
Query: 450 TQLVPP---IYVLILCPTRELASQIAAEAIAL-------LKNHDGIGVLTLVGGTRFKVD 499
PP + +LI+ PTRELA QIA L L+ H +G G R
Sbjct: 68 ----PPRGQVAILIITPTRELAQQIAKSCDQLTSQLARPLECHIAVG-----GTARASAL 118
Query: 500 QRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIV 559
R ++ P ILVATPGRL D++ S + +L ++ L+LD+AD +L+ GF DV+ I+
Sbjct: 119 ARFMKGAP-SILVATPGRLKDYLSEPS-TAEKLSNIQTLILDKADTMLESGFLADVKRIL 176
Query: 560 DCLPRRR---QSLLFSATMPKEL------VLKREHTYIDTVGLGSVETPVKIKQSCLVAP 610
+P + Q + FSAT+P ++ VLK +T I T+ T ++ Q ++ P
Sbjct: 177 QLIPPKSTGWQGMCFSATVPPKVKDVVSVVLKPGYTSISTIEKNETPTHERVPQYHVLIP 236
Query: 611 HEL-HFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLRE--MKMNVREMYSRKPQ 667
F L LL I + K+IVF T + +L + + V E++SR Q
Sbjct: 237 SVADTFTTLASLLNLEIKNS--SKIIVFGVTANMVALFAAAFSQGLTPLKVFEIHSRLSQ 294
Query: 668 LYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGK 727
R + + F+ + I+ SDV RGMD+P+V V+QVG+P + EQY+HR+GRT R G
Sbjct: 295 SARTKTTALFKEAATGIMFASDVIGRGMDFPNVDLVIQVGLPSNGEQYVHRVGRTARAGN 354
Query: 728 EGEGVLLLAPWEEYFLDDLKDLPLDKLQLPH-----LNPEIQLQMD---NHMAKIDNNVK 779
+G ++LL E +F+ + LP+ PH +N D M I K
Sbjct: 355 DGRAIILLTEAESFFMKVNRHLPIQ----PHPQTDAINAGTSSCADAVTKAMYSIGEETK 410
Query: 780 EAAYHAWLGYYNS---IREIGRDKTTLVELANKFA-QSIGLQRPPPLFRKTALKMGLKDI 835
+ AY +++G++ ++++ DK LV+LAN+ A Q +G PPP+ +K KMGLK +
Sbjct: 411 QRAYSSYIGFFAGSGLLKQVRLDKPGLVQLANELAIQGMGCPEPPPMDKKVVGKMGLKGV 470
Query: 836 PGI 838
PG
Sbjct: 471 PGF 473
>gi|346321585|gb|EGX91184.1| ATP-dependent RNA helicase mss116 [Cordyceps militaris CM01]
Length = 666
Score = 228 bits (582), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 173/492 (35%), Positives = 259/492 (52%), Gaps = 48/492 (9%)
Query: 383 ECGISPLTIKALTA-AGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAV 441
+ G++ ++A+T GY M+ VQE T++ L+G D V +AKTGTGK+IAFLLP ++ +
Sbjct: 89 DMGVNETLLRAITKDLGYQTMSPVQEKTIAPALKGTDIVAQAKTGTGKTIAFLLPLLQRM 148
Query: 442 LK-----ATSSSTTQLVP-PIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTR 495
+ AT S+ Q I ++L PTRELA QIA EA L + H G+ V + VGGT
Sbjct: 149 INEDPTLATRSAKYQARSNDIRGIVLSPTRELAEQIAEEARRLTR-HTGLVVQSAVGGTM 207
Query: 496 FKVDQRRLESDPCQILVATPGRLLDHIEN-KSGLSVRLMGLKMLVLDEADHLLDLGFRKD 554
+ + C +LVATPGRL D + + +SGL+ L +VLDEAD +LD+GF ++
Sbjct: 208 KNQMLYKTRREGCHLLVATPGRLHDLLSDERSGLAA--PNLAAMVLDEADRMLDVGFERE 265
Query: 555 VENIVDCLPR----RRQSLLFSATMP-------KELVLKREHTYIDTVGLGSVETPVKIK 603
++ I+D LPR RQ++L SAT+P + +V + ++ T+ T +
Sbjct: 266 LKAIIDLLPRPDEKVRQTMLVSATIPDSVIRLTRSMVRADDFEFVQTISESDSLTHDHVN 325
Query: 604 QSCLVAPHELH-FQILHHLLKEHIL---GTPD---YKVIVFCSTGMVTSL---LYLLLRE 653
Q+ +V H + F L L+ + I PD +K IV+ +T +T L +
Sbjct: 326 QNLVVVSHMNNVFPALFELIDKAIADAKANPDKSPFKGIVYLNTTAMTQLAGEMGFAKNR 385
Query: 654 MKMNVRE--MYSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPD 711
+ +R ++S Q R R +E FR S+ IL +SDV+ARGMD+PDVT V+Q+ P D
Sbjct: 386 DRTFIRNFAIHSGLTQSARTRAAENFRKSESGILFSSDVTARGMDFPDVTHVIQIDCPRD 445
Query: 712 REQYIHRLGRTGREGKEGEGVLLLAPWEEYFLDD-LKDLPLD---KLQLPHLN------- 760
RE YIHRLGRT R+ K+GEG LLL L+ LPL L+ +
Sbjct: 446 RETYIHRLGRTARQQKDGEGWLLLPAMSRSRARGLLRGLPLQPNTSLESATFDVASGDAE 505
Query: 761 PEIQLQMDNHMAKIDNNVKEAAYHAWLGYYNSIREIGRDKTTLVELANKFAQSIGLQRPP 820
PE ++ + V E AY + ++S + RD +V++ Q G Q PP
Sbjct: 506 PEAVTATKQLYPRMPSKVLEEAYR--VSIFSSTEKHARDD-MVVQMNEWVTQGWGWQSPP 562
Query: 821 PLFRKTALKMGL 832
+ + A + G
Sbjct: 563 TVSKMRADRAGF 574
>gi|189234356|ref|XP_973872.2| PREDICTED: similar to pitchoune CG6375-PB [Tribolium castaneum]
Length = 695
Score = 228 bits (581), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 164/472 (34%), Positives = 259/472 (54%), Gaps = 33/472 (6%)
Query: 375 ILSQKRFDECG--ISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIA 432
ILS FD + T+KA+ G+ +T +Q ++ LEG+D V AKTG+GK++A
Sbjct: 124 ILSNCTFDSLKNKVCENTLKAIADMGFTTLTEIQARSIPPLLEGRDLVGAAKTGSGKTLA 183
Query: 433 FLLPAIEAVLKATSSSTTQLVP--PIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTL 490
FL+PA+E + K + +P V+I+ PTREL+ Q L+K H L +
Sbjct: 184 FLIPAVELIYK------LKFMPRNGTGVIIISPTRELSMQTFGVLKELMKYHHHTYGLVM 237
Query: 491 VGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLG 550
GGT + + ++L S ILVATPGRLLDH++N + L+ LV+DEAD +LD+G
Sbjct: 238 -GGTSRQTEAQKL-SKGINILVATPGRLLDHMQNTPDFLFK--NLQCLVIDEADRILDIG 293
Query: 551 FRKDVENIVDCLPRRRQSLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQ 604
F ++++ I++ LP+RRQ++LFSAT K+ L LK+E Y+ S T ++Q
Sbjct: 294 FEEEMKQIINLLPKRRQTMLFSATQTKKTEALTSLALKKEPIYVGVDDAKSEATVTGLEQ 353
Query: 605 SCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSR 664
+V P E +L LK++ KV+VF S+ M + L + + V ++ +
Sbjct: 354 GYVVCPSEKRLLVLFTFLKKN----RKKKVMVFFSSCMSVKFHHELFNYIDLPVMCIHGK 409
Query: 665 KPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGR 724
+ Q R +F ++ IL+ +DV+ARG+D P V +VQ P D ++YIHR+GRT R
Sbjct: 410 QKQAKRTTTFFQFCNAESGILLCTDVAARGLDIPAVDWIVQYDPPDDPKEYIHRVGRTAR 469
Query: 725 -EGKEGEGVLLLAPWEEYFLDDLKD--LPLDKLQLP-HLNPEIQLQMDNHMAK---IDNN 777
EG G +L+L P E FL LK +PL++ + + +IQLQ++N + K ++ +
Sbjct: 470 GEGSSGHALLILRPEELGFLRYLKQAKVPLNEFEFSWNKIADIQLQLENLIGKNYFLNMS 529
Query: 778 VKEAAYHAWLGYYNSIREIGRDKTTLVELANKFAQSIGLQRPPPLFRKTALK 829
KE A+ A++ Y+S + ++LA K S G + PP + K +K
Sbjct: 530 AKE-AFKAYVRAYDSHHLKTIFDISTLDLA-KVGLSFGFKVPPAVDLKVTVK 579
>gi|315056235|ref|XP_003177492.1| ATP-dependent RNA helicase mss116 [Arthroderma gypseum CBS 118893]
gi|311339338|gb|EFQ98540.1| ATP-dependent RNA helicase mss116 [Arthroderma gypseum CBS 118893]
Length = 639
Score = 228 bits (581), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 162/473 (34%), Positives = 245/473 (51%), Gaps = 51/473 (10%)
Query: 319 SASLGKYDMKITKRVPLKSLEDEHDFEEQVELIRKEISKNKLNGNGEKKEKREEEPILSQ 378
+++L K+ ++ R+P+ L DF + + N E ++ EE I
Sbjct: 23 TSTLAKHSLR---RLPIAPLLTSRDFHVTPQF---RVPAGTANAGIEVEDAGEEALITEF 76
Query: 379 KRFDECGI-SPLTIKALT-AAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLP 436
E G+ I A+T G MT VQ T++ ++G D + +AKTGTGK++AFLLP
Sbjct: 77 AELGEKGVVDQRLINAITKGMGLKTMTDVQAQTINESIQGTDMIAQAKTGTGKTVAFLLP 136
Query: 437 AIEAVLKATSSSTTQ--LVPP--IYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVG 492
I +L+ + + P I +++ PTRELA QIA EA + + G+ V T VG
Sbjct: 137 VIHRILQDPTIGNLRRSFTSPQDIRAVVISPTRELAEQIAVEAQKITRG-SGLKVQTAVG 195
Query: 493 GTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFR 552
GTR + RL+ + C ILV TPGRL+D + + V L+ VLDEAD LLD+GF
Sbjct: 196 GTRKREGLMRLQREGCHILVGTPGRLMDLFSDPAS-GVAAPKLQAFVLDEADRLLDIGFA 254
Query: 553 KDVENIVDCLPRR----RQSLLFSATMPKEL------VLKREHTYIDTVGLGSVETPVKI 602
D+E I P R RQ+L+FSAT+P + +LK + T+++TVG ETP +
Sbjct: 255 PDIERIQSFFPSRSQVDRQTLMFSATIPNSVKGLARSMLKPDFTFVNTVG---DETPTHL 311
Query: 603 K---QSCLVAPHELHFQILHHLLKEHI---LGTPD----YKVIVFCSTGMVTSL----LY 648
+ ++ + E L + K + PD +K +V+ + S+
Sbjct: 312 RVPQRAVFLRGFENQLPALFEIAKRAVQAHAANPDTAMPFKAVVYYGSTAEVSVARRAFT 371
Query: 649 LLLREM---------KMNVREMYSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPD 699
L R++ ++ EM+SR Q R S+ FR + IL +SDV+ARGMD+P+
Sbjct: 372 ALCRDLESFYTGRAPRIQTIEMHSRLTQAQRTFNSDSFRRATTGILFSSDVTARGMDFPN 431
Query: 700 VTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLAPWE-EYFLDDLKDLPL 751
V+ V+Q+G+P D + YIHRLGRT R K GEG +L E + F + L+ LP+
Sbjct: 432 VSHVIQMGVPNDTDTYIHRLGRTARADKTGEGWILFPDIEFDAFGEKLRSLPI 484
>gi|29351661|gb|AAH49217.1| DDX10 protein, partial [Homo sapiens]
Length = 745
Score = 228 bits (581), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 147/428 (34%), Positives = 238/428 (55%), Gaps = 32/428 (7%)
Query: 380 RFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIE 439
RF + +S T+K L A Y +T +Q+ T+ L+GKD + AKTG+GK++AFL+P +E
Sbjct: 70 RFSDFPLSKKTLKGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLE 129
Query: 440 AVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVD 499
A+ + +ST L VLI+ PTRELA Q + KNHD L ++GG K +
Sbjct: 130 ALYRLQWTSTDGL----GVLIISPTRELAYQTFEVLRKVGKNHDFSAGL-IIGGKDLKHE 184
Query: 500 QRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIV 559
R+ + ILV TPGRLL H++ +S L+MLVLDEAD +LD+GF + ++
Sbjct: 185 AERINN--INILVCTPGRLLQHMDE--TVSFHATDLQMLVLDEADRILDMGFADTMNAVI 240
Query: 560 DCLPRRRQSLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHEL 613
+ LP++RQ+LLFSAT K L LK Y+ TP ++Q+ +V +
Sbjct: 241 ENLPKKRQTLLFSATQTKSVKDLARLSLKNPE-YVWVHEKAKYSTPATLEQNYIVCELQQ 299
Query: 614 HFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK--MNVREMYSRKPQLYRD 671
+L+ L+ H+ K IVF S+ LY + ++ +++ ++ R+ Q+ R
Sbjct: 300 KISVLYSFLRSHL----KKKSIVFFSSCKEVQYLYRVFCRLRPGVSILALHGRQQQMRRM 355
Query: 672 RISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEG 731
+ EF + +L +D++ARG+D+P V V+Q P D YIHR GRT R ++GE
Sbjct: 356 EVYNEFVRKRAAVLFATDIAARGLDFPAVNWVLQFDCPEDANTYIHRAGRTARYKEDGEA 415
Query: 732 VLLLAPWEEYFLDDL--KDLPLDKLQLPHLNPE----IQLQMDNHMAKIDNNVKEAAYHA 785
+L+L P E+ + L K +P+ +++ +NPE +Q ++++ +A+ D ++KE A
Sbjct: 416 LLILLPSEKAMVQQLLQKKVPVKEIK---INPEKLIDVQKKLESILAQ-DQDLKERAQRC 471
Query: 786 WLGYYNSI 793
++ Y S+
Sbjct: 472 FVSYVRSV 479
>gi|402082718|gb|EJT77736.1| hypothetical protein GGTG_02841 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 727
Score = 228 bits (581), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 184/540 (34%), Positives = 269/540 (49%), Gaps = 83/540 (15%)
Query: 368 EKREEEP-------ILSQKRFDECGISPLTIKALTA-AGYIQMTRVQEATLSACLEGKDA 419
E R EEP I + G+ +KA+ GY MT VQ TL LEGKD
Sbjct: 66 EARNEEPGSSAPGQITQFADLSKVGVHENLVKAIVQDMGYQNMTEVQSVTLGPALEGKDM 125
Query: 420 VVKAKTGTGKSIAFLLPAIEAVL--------------KATSSSTTQLVPPIYVLILCPTR 465
V +AKTGTGK++AFL P + +L + ++S +++ I +++ PTR
Sbjct: 126 VAQAKTGTGKTLAFLTPVLSRILSQDPDLASRQYRTQRGSNSLGSRI--DIRAIVISPTR 183
Query: 466 ELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENK 525
ELA QIA EA L N G+ V VGGTR + + + C ILV TPGRL D + +
Sbjct: 184 ELAEQIAKEAEKLCAN-TGLKVALAVGGTRKRQSLQEMHRFGCNILVGTPGRLNDLLMDS 242
Query: 526 SGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRR----RQSLLFSATMPKELV- 580
S V + L+LDEAD +LD+GF K++ +IV+ LP R RQ+LLFSAT+P +V
Sbjct: 243 SS-GVVAPKISALILDEADRMLDVGFEKELRSIVETLPDRERQPRQTLLFSATIPDNVVN 301
Query: 581 LKREHTYIDTVGLGSVET------PVKIKQSCLVAPHELHFQILHHLL----------KE 624
L R Y+D V+T P K + P + + +L ++ ++
Sbjct: 302 LAR--WYVDRKNFKFVQTVKEDEAPTHEKVPQFIVPVKRYENMLPAVIDLVTKQVEACQQ 359
Query: 625 HILGTPDYKVIVFCSTGMVTSLLYLLLREMKMN------VREMYSRKPQLYRDRISEEFR 678
L P +K I+F +T + ++ ++ + V ++S+ Q R R +E FR
Sbjct: 360 DPLKDP-FKAIIFFPFTTLTHMSARIMSQIGRDLPQIPEVYYIHSKLDQNQRTRAAENFR 418
Query: 679 ASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLAPW 738
+K ILV+SDV+ARGMD+P+VT V+Q G+PP REQYIHRLGRTGR K GEG +L+
Sbjct: 419 RAKSAILVSSDVTARGMDFPNVTHVIQYGLPPQREQYIHRLGRTGRADKAGEGWILVP-- 476
Query: 739 EEYFLDD----LKDLP-----------LDKL--QLPHLNPEIQLQMDNHMAKIDNNVKEA 781
E+ ++D L P LDK L +P + + + +I N+ E
Sbjct: 477 -EFAMNDARRMLGGFPIQRRADIESALLDKAPETLEDASPSYR-AVAKQLRRIPENMLEE 534
Query: 782 AYHAWLGYYNSIREIGRDKTTLVELANKFAQ-SIGLQRPPPLFRKTALKMGLKDIPGIRL 840
Y G LV+ N++ + + G + PP L A + GL IPG+ +
Sbjct: 535 TYMIHFGQAEK-----HLLPVLVQQLNEWTKNAWGWEEPPVLSPSLADRKGLARIPGVNI 589
>gi|328849019|gb|EGF98209.1| hypothetical protein MELLADRAFT_40958 [Melampsora larici-populina
98AG31]
Length = 718
Score = 227 bits (579), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 162/438 (36%), Positives = 227/438 (51%), Gaps = 58/438 (13%)
Query: 383 ECGISPLTIKALTAA--GYIQMTRVQEATLS---ACLEG--------KDAVVKAKTGTGK 429
E ISP KA+ GY M+ VQ A LS L KD +VKAKTGTGK
Sbjct: 51 EKHISPQLYKAIVQKPFGYHDMSPVQSALLSDLPTLLHNPSDLNSTTKDLLVKAKTGTGK 110
Query: 430 SIAFLLPAIEAVL---KATSSSTTQLVP-----------------PIYVLILCPTRELAS 469
++AFL+PAIE+ L K + T P ++IL PTRELA+
Sbjct: 111 TLAFLIPAIESRLRDLKGEAERFTTQNPNSSQHDLFRHMRTYENDTTGIVILSPTRELAT 170
Query: 470 QIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLS 529
QIA EAI L + GV VGG + R ++ ++VATPGR+ D I + +
Sbjct: 171 QIATEAIKLTSHIKDFGVRLFVGGASKSLQLRDWQNGRRDLIVATPGRIYDVINSNRSIL 230
Query: 530 VRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRR--RQSLLFSATMPKEL------VL 581
+ K L++DEAD LL++GF+ +++ IV LP + R + LFSAT+ +E+ +
Sbjct: 231 NNVGTTKTLIMDEADTLLEMGFKDEIDQIVQHLPPKDLRSTYLFSATISQEISRIAKTTM 290
Query: 582 KREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILH--HLLKEHILGTPDYKVIVFCS 639
K + +D V G I Q V P H Q+ H ++L L P K I+F
Sbjct: 291 KSDLKIVDCVPKGESNVHAHIPQFYTVLPSPEH-QLRHIFNILAHDQLLNPTGKSIIFLP 349
Query: 640 TGMVTSLLYLLLREMKMN----------VREMYSRKPQLYRDRISEEFRASK---RLILV 686
T +T L +L M+ + + EM+ + Q R+ +++FR+ K +LV
Sbjct: 350 TTKMTQLFSQILMSMRRHLPWNVTGLTKIYEMHGGRSQSEREHTAQDFRSGKGGGYQVLV 409
Query: 687 TSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLAPWE-EYFLDD 745
TSDVSARG+DYP VT V+Q+G+P R+ YIHR+GRTGR GK G G L+L PWE Y
Sbjct: 410 TSDVSARGVDYPGVTRVIQIGVPTSRDIYIHRVGRTGRAGKAGRGDLVLLPWEIGYVSTA 469
Query: 746 LKDLPLDKLQLPHLNPEI 763
L ++PL L + LN E+
Sbjct: 470 LHNIPLQPLPVRTLNEEV 487
>gi|389740787|gb|EIM81977.1| DEAD-domain-containing protein [Stereum hirsutum FP-91666 SS1]
Length = 773
Score = 227 bits (579), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 155/402 (38%), Positives = 210/402 (52%), Gaps = 44/402 (10%)
Query: 417 KDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLVPP--------------------- 455
+D +VKAKTGTGK++ FL+PAIEA LKA + + +
Sbjct: 173 RDLLVKAKTGTGKTLGFLVPAIEARLKAIDKAGQRALAAEGVTSNPAVENRAKRVFAMNS 232
Query: 456 IYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILVATP 515
+ LI+ PTRELA+QIA EAI L HD V GGT + R ++VATP
Sbjct: 233 VGTLIISPTRELATQIANEAIRLSHWHDDFEVRLFTGGTSKRNQLRDFIRGRRDVVVATP 292
Query: 516 GRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPR--RRQSLLFSA 573
GRL D +E++ + + + L+LDEAD LL++GFR +++ I + LP RQ+ LFSA
Sbjct: 293 GRLRDLLESEPEVRRAMKETQTLILDEADTLLEMGFRDEIDAIKEFLPPTPERQTFLFSA 352
Query: 574 TMPKEL------VLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILH--HLLKEH 625
T+ + L + HT+ID V I Q V P QI H L+
Sbjct: 353 TLSTSIRQVARSTLDKSHTFIDVVPKDDSPVHSHIPQFHTVLPSAAD-QIPHILRLIAHD 411
Query: 626 ILGTPD-YKVIVFCSTGMVTSLLYLLLREM--------KMNVREMYSRKPQLYRDRISEE 676
L P K+IVF T +T L LLR++ + V E++S++ Q R ++S+
Sbjct: 412 QLSNPGKSKLIVFLPTTKMTQLFATLLRQLSHSVPAGKQTRVYEIHSKRTQESRSKVSDM 471
Query: 677 FR--ASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLL 734
FR S ILV+SD+SARG+DYP VT V+QVGIP EQYIHR+GRTGR G G G L+
Sbjct: 472 FRKDQSGATILVSSDISARGVDYPGVTRVIQVGIPGGTEQYIHRVGRTGRAGTSGRGDLV 531
Query: 735 LAPWEEYFLD-DLKDLPLDKLQLPHLNPEIQLQMDNHMAKID 775
L PWE F+ L + P+ L L E+ H A D
Sbjct: 532 LLPWEIGFISWQLTEFPIKALHTNELKSEVAELSSKHDADPD 573
>gi|330794200|ref|XP_003285168.1| hypothetical protein DICPUDRAFT_76134 [Dictyostelium purpureum]
gi|325084889|gb|EGC38307.1| hypothetical protein DICPUDRAFT_76134 [Dictyostelium purpureum]
Length = 815
Score = 227 bits (579), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 144/454 (31%), Positives = 238/454 (52%), Gaps = 25/454 (5%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F + +S LT K LT + + ++T +Q A+L L G+D + A+TG+GK++AF++P +E
Sbjct: 111 FKDLPLSQLTQKGLTESKFYKLTDIQRASLPHTLCGRDILGAARTGSGKTLAFIIPVLET 170
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+ + S I ++L PTRELA QI + + + H L+GG V Q
Sbjct: 171 LWRNRWSRND----GIGAIVLSPTRELAIQIF-DVLKSVGKHHTFSAGLLIGGRN--VTQ 223
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
+ + + IL+ATPGRLL H++ G LKMLVLDEAD +LDLGF K + +I++
Sbjct: 224 EKEKVNAMNILIATPGRLLQHMDETYGFDCS--NLKMLVLDEADRILDLGFSKSLNSILE 281
Query: 561 CLPRRRQSLLFSATMPKEL-----VLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHF 615
LP++RQ+LLFSAT K + + E YI + P + Q+ + P E+
Sbjct: 282 NLPKQRQTLLFSATQTKSVRDLVRLSLNEPEYISVYEKDIITAPQNLTQTICIIPLEMKL 341
Query: 616 QILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK--MNVREMYSRKPQLYRDRI 673
+L+ +K H+ KVIVF ++ +Y R + ++ +++ + Q R +
Sbjct: 342 NMLYSFVKTHLTS----KVIVFFASCKQIRFVYETFRLLNPGTSLFQLHGKMKQWTRLEV 397
Query: 674 SEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVL 733
E+F K +L +D++ARG+D+P+V V+QV P D E YIHR+GRT R G+ +
Sbjct: 398 FEDFCKKKAGVLFATDIAARGLDFPEVEWVIQVDCPDDIETYIHRIGRTARNNATGQAIT 457
Query: 734 LLAPWEEYFLDDLKDLPLDKLQLPHLNPEIQLQMDNHMAKIDNNVKEAAYHAWLGYYNSI 793
+L P E+ + L + K ++ NPE + +D+ ++ + E Y A + + +
Sbjct: 458 ILLPSEKEAMTALLEKQKMKYEVLEPNPEKLVSIDSQLSGFLSEKTELKYLAQKSFVSYL 517
Query: 794 REIGRDKTTLVELANK-----FAQSIGLQRPPPL 822
R + R + K F++S+GL P +
Sbjct: 518 RSVYRQSNKEIFNIEKLNIEDFSKSLGLLGKPQI 551
>gi|301764042|ref|XP_002917443.1| PREDICTED: probable ATP-dependent RNA helicase DDX10-like
[Ailuropoda melanoleuca]
Length = 926
Score = 227 bits (578), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 160/476 (33%), Positives = 254/476 (53%), Gaps = 47/476 (9%)
Query: 380 RFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIE 439
RF + +S T+K L A Y +T +Q+ T+ L+GKD + AKTG+GK++AFL+P +E
Sbjct: 126 RFSDFPLSKKTLKGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLE 185
Query: 440 AVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVD 499
A+ + +ST L VLI+ PTRELA Q + KNHD L ++GG K +
Sbjct: 186 ALYRLQWTSTDGL----GVLIISPTRELAYQTFEVLRKVGKNHDFSAGL-IIGGKDLKHE 240
Query: 500 QRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIV 559
R+ + ILV TPGRLL H++ + L+MLVLDEAD +LD+GF + I+
Sbjct: 241 AERINN--INILVCTPGRLLQHMDE--TICFHATNLQMLVLDEADRILDMGFADTMNAII 296
Query: 560 DCLPRRRQSLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHEL 613
+ LP++RQ+LLFSAT K L LK Y+ TP ++Q+ +V +
Sbjct: 297 ENLPKKRQTLLFSATQTKSVKDLARLSLKNPE-YVWVHEKAKYSTPATLEQNYIVCELQQ 355
Query: 614 HFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK--MNVREMYSRKPQLYRD 671
+L+ L+ H+ K IVF S+ LY + ++ +++ ++ R+ Q+ R
Sbjct: 356 KISVLYSFLRSHL----KKKSIVFFSSCKEVQYLYRVFCRLRPGISILALHGRQQQMRRM 411
Query: 672 RISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEG 731
+ EF + +L +D++ARG+D+P V V+Q P D YIHR GRT R ++GE
Sbjct: 412 EVYNEFVRKRAAVLFATDIAARGLDFPAVNWVLQFDCPEDANTYIHRAGRTARYKEDGEA 471
Query: 732 VLLLAPWEEY-FLDDL--KDLPLDKLQLPHLNPE----IQLQMDNHMAKIDNNVKEAAYH 784
+L+L P EE + L K +P+ +++ +NPE +Q ++++ +A+ D ++KE A
Sbjct: 472 LLILLPSEEKGMVQQLLQKKVPVKEIK---INPEKLIDVQKKLESFLAQ-DQDLKERAQR 527
Query: 785 AWLGYYNSIREIGRDKTTLVELANKFAQSIGLQRPPPLFRKTALKMGLKDIPGIRL 840
++ Y S+ + +DK NK P P + AL +GL P +R
Sbjct: 528 CFVSYIRSVY-LMKDKEIFD--VNKL--------PIPEY---ALSLGLAVAPRVRF 569
>gi|448124024|ref|XP_004204815.1| Piso0_000094 [Millerozyma farinosa CBS 7064]
gi|358249448|emb|CCE72514.1| Piso0_000094 [Millerozyma farinosa CBS 7064]
Length = 578
Score = 227 bits (578), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 163/462 (35%), Positives = 252/462 (54%), Gaps = 42/462 (9%)
Query: 380 RFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIE 439
+FDE G+S T+KA+ G+ +MT VQ T+ L G+D + AKTG+GK++AFL+PAIE
Sbjct: 115 KFDEIGLSEPTLKAIKDLGFSKMTEVQSRTIPPLLAGRDVLGAAKTGSGKTLAFLIPAIE 174
Query: 440 AV--LKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFK 497
+ LK + T V+I+ PTRELA QI A L+ +H + + G R +
Sbjct: 175 LLYSLKFKPRNGTG------VIIISPTRELALQIFGVARELMAHHTQTFGIVIGGANRRQ 228
Query: 498 VDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVEN 557
++ ++ +L+ATPGRLLDH++N G R LK LV+DEAD +L++GF +++
Sbjct: 229 EAEKLMKG--VNLLIATPGRLLDHLQNTKGFVFR--NLKALVIDEADRILEIGFEEEMRQ 284
Query: 558 IVDCLPRR-RQSLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSCLVAP 610
I+ LP RQS+LFSAT + + L+ YI+ + T ++Q +V
Sbjct: 285 IIKILPNEDRQSMLFSATQTTKVEDLARMSLRPGPLYINVASEAAASTADGLEQGYVVCD 344
Query: 611 HELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYR 670
+ F +L LK +I K+IVF S+ LL + + V +++ ++ Q R
Sbjct: 345 SDKRFLLLFSFLKRNI----KKKIIVFLSSCNCVKYFGELLNYIDLPVLDLHGKQKQQKR 400
Query: 671 DRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGR-EGKEG 729
EF +K+ IL+ +DV+ARG+D P V ++Q P D YIHR+GRT R G +G
Sbjct: 401 TNTFFEFCNAKQGILICTDVAARGLDIPAVDWIIQFDPPDDPRDYIHRVGRTARGTGGKG 460
Query: 730 EGVLLLAPWEEYFLDDLK--DLPLDKLQLP-HLNPEIQLQMDNHMAKIDNNVKEAA---Y 783
+ +L LAP E FL LK ++PL++ + P + IQ Q+ N + K + + ++A Y
Sbjct: 461 KSLLFLAPSELGFLRYLKAANVPLNEYEFPDNKIANIQSQL-NKLIKSNYWLHQSAKDGY 519
Query: 784 HAWLGYYNS-----IREIGRDKTTLVELANKFAQSIGLQRPP 820
A+L Y S + +I D+ LV K A+S G + PP
Sbjct: 520 RAYLQAYASHHLKTVYQI--DRLDLV----KVARSFGFEVPP 555
>gi|194212659|ref|XP_001499618.2| PREDICTED: probable ATP-dependent RNA helicase DDX10 [Equus
caballus]
Length = 874
Score = 227 bits (578), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 148/429 (34%), Positives = 237/429 (55%), Gaps = 33/429 (7%)
Query: 380 RFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIE 439
RF + +S T+K L A Y +T +Q+ T+ L+GKD + AKTG+GK++AFL+P +E
Sbjct: 70 RFSDFPLSKKTLKGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLE 129
Query: 440 AVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVD 499
A+ + +ST L VLI+ PTRELA Q + KNHD L ++GG K +
Sbjct: 130 ALYRLQWTSTDGL----GVLIISPTRELAYQTFEVLRKVGKNHDFSAGL-IIGGKDLKHE 184
Query: 500 QRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIV 559
R+ + ILV TPGRLL H++ + L+MLVLDEAD +LD+GF + I+
Sbjct: 185 AERINN--INILVCTPGRLLQHMDE--TICFHATNLQMLVLDEADRILDMGFADTMNAII 240
Query: 560 DCLPRRRQSLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHEL 613
+ LP++RQ+LLFSAT K L LK Y+ TP ++Q+ +V +
Sbjct: 241 ENLPKKRQTLLFSATQTKSVKDLARLSLKNPE-YVWVHEKAKYSTPATLEQNYIVCELQQ 299
Query: 614 HFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK--MNVREMYSRKPQLYRD 671
+L+ L+ H+ K IVF S+ LY + ++ +++ ++ R+ Q+ R
Sbjct: 300 KISVLYSFLRSHL----KKKSIVFFSSCKEVQYLYRVFCRLRPGVSILALHGRQQQMRRM 355
Query: 672 RISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEG 731
+ EF + +L +D++ARG+D+P V V+Q P D YIHR GRT R ++GE
Sbjct: 356 EVYNEFVRKRAAVLFATDIAARGLDFPAVNWVLQFDCPEDANTYIHRAGRTARYKEDGEA 415
Query: 732 VLLLAPWEEY-FLDDL--KDLPLDKLQLPHLNPE----IQLQMDNHMAKIDNNVKEAAYH 784
+L+L P EE + L K +P+ +++ +NPE +Q ++++ +A+ D ++KE A
Sbjct: 416 LLILLPSEEKGMVQQLLQKKVPVKEIK---INPEKLIDVQKKLESFLAQ-DQDLKERAQR 471
Query: 785 AWLGYYNSI 793
++ Y S+
Sbjct: 472 CFVSYIRSV 480
>gi|423559882|ref|ZP_17536184.1| hypothetical protein II3_05086 [Bacillus cereus MC67]
gi|401187066|gb|EJQ94141.1| hypothetical protein II3_05086 [Bacillus cereus MC67]
Length = 450
Score = 227 bits (578), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 139/387 (35%), Positives = 207/387 (53%), Gaps = 41/387 (10%)
Query: 375 ILSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFL 434
+++ K F E GIS L G + T +QE + + GKD + +AKTGTGK++AF+
Sbjct: 1 MVNMKNFLELGISETFNHTLRENGITEATPIQEKAIPVIMSGKDIIGQAKTGTGKTLAFV 60
Query: 435 LPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGT 494
LP +E + +S + LI+ PTRELA QI AE +L + + I VL + GG
Sbjct: 61 LPILEKINPESSD--------VQALIVAPTRELALQITAEIKKMLVHREDINVLAIYGGQ 112
Query: 495 RFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKD 554
R+L+ + I+VATPGRLLDHI ++ + L L MLVLDEAD +L GF D
Sbjct: 113 DVAQQLRKLKGN-THIVVATPGRLLDHIRRET---IDLSNLSMLVLDEADQMLYFGFLYD 168
Query: 555 VENIVDCLPRRRQSLLFSATMPKEL--------------VLKREHTYIDTVGLGSVETPV 600
+E+I+D P +Q++LFSATMPK++ ++ E +DT+ +ET
Sbjct: 169 IEDILDETPDSKQTMLFSATMPKDIKKLAKRYMEEPQMIQVQSEEVTVDTIEQRVIETTD 228
Query: 601 KIKQSCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVRE 660
+ K P L F + + ++FC T + S LY L+ N E
Sbjct: 229 RAK------PDALRFVMDRD---------QPFLAVIFCRTKVRASKLYDDLKGFGYNCAE 273
Query: 661 MYSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLG 720
++ PQ R+R+ + FR +K L+ +DV+ARG+D VT V IP D E YIHR+G
Sbjct: 274 LHGDIPQAKRERVMKSFREAKIQYLIATDVAARGLDVDGVTHVFNYDIPEDVESYIHRIG 333
Query: 721 RTGREGKEGEGVLLLAPWEEYFLDDLK 747
RTGR G G + +A +E +L++++
Sbjct: 334 RTGRAGGSGLAITFVAAKDERYLEEIE 360
>gi|448121647|ref|XP_004204262.1| Piso0_000094 [Millerozyma farinosa CBS 7064]
gi|358349801|emb|CCE73080.1| Piso0_000094 [Millerozyma farinosa CBS 7064]
Length = 578
Score = 227 bits (578), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 164/462 (35%), Positives = 251/462 (54%), Gaps = 42/462 (9%)
Query: 380 RFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIE 439
+FDE G+S T+KA+ G+ +MT VQ T+ L G+D + AKTG+GK++AFL+PAIE
Sbjct: 115 KFDEIGLSEPTLKAIKDLGFSKMTEVQSRTIPPLLAGRDVLGAAKTGSGKTLAFLIPAIE 174
Query: 440 AV--LKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFK 497
+ LK + T V+I+ PTRELA QI A L+ +H + + G R +
Sbjct: 175 LLYSLKFKPRNGTG------VIIISPTRELALQIFGVARELMAHHTQTFGIVIGGANRRQ 228
Query: 498 VDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVEN 557
++ ++ +L+ATPGRLLDH++N G R LK LV+DEAD +L++GF +++
Sbjct: 229 EAEKLMKG--VNLLIATPGRLLDHLQNTKGFVFR--NLKALVIDEADRILEIGFEEEMRQ 284
Query: 558 IVDCLPRR-RQSLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSCLVAP 610
I+ LP RQS+LFSAT + + L+ YI+ T ++Q +V
Sbjct: 285 IIKILPNEDRQSMLFSATQTTKVEDLARMSLRPGPLYINVASEAVASTADGLEQGYVVCD 344
Query: 611 HELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYR 670
+ F +L LK +I KVIVF S+ LL + + V +++ ++ Q R
Sbjct: 345 SDKRFLLLFSFLKRNI----KKKVIVFLSSCNCVKYFGELLNYIDLPVLDLHGKQKQQKR 400
Query: 671 DRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGR-EGKEG 729
EF +K+ IL+ +DV+ARG+D P V ++Q P D YIHR+GRT R G +G
Sbjct: 401 TNTFFEFCNAKQGILICTDVAARGLDIPAVDWIIQFDPPDDPRDYIHRVGRTARGTGGKG 460
Query: 730 EGVLLLAPWEEYFLDDLK--DLPLDKLQLP-HLNPEIQLQMDNHMAKIDNNVKEAA---Y 783
+ +L LAP E FL LK ++PL++ + P + IQ Q+ N + K + + ++A Y
Sbjct: 461 KSLLFLAPSELGFLRYLKAANVPLNEYEFPDNKIANIQSQL-NKLIKSNYWLHQSAKDGY 519
Query: 784 HAWLGYYNS-----IREIGRDKTTLVELANKFAQSIGLQRPP 820
A+L Y S + +I D+ LV K A+S G + PP
Sbjct: 520 RAYLQAYASHHLKTVYQI--DRLDLV----KVARSFGFEVPP 555
>gi|255930447|ref|XP_002556783.1| Pc06g01780 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211581396|emb|CAP79171.1| Pc06g01780 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 684
Score = 227 bits (578), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 169/494 (34%), Positives = 250/494 (50%), Gaps = 66/494 (13%)
Query: 402 MTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQL--------V 453
MT VQ TL+ ++G D + +AKTGTGK++AFLLP ++ +L S +++
Sbjct: 106 MTEVQSLTLNQIVKGDDILAQAKTGTGKTLAFLLPTLQNILNDPSVDMSRVGRRPTRAAA 165
Query: 454 PPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILVA 513
I LI+ PTRELA QIA EA + G+ V T VGGT+ + +++ C +L+
Sbjct: 166 SEIRALIISPTRELAEQIAVEAKKVAFG-TGLLVQTAVGGTQKRAGLTKIQQQGCHLLIG 224
Query: 514 TPGRLLDHIENK-SGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPR----RRQS 568
TPGRL D + + +G+S L L+LDEAD LLD GF D+ I LP RQ+
Sbjct: 225 TPGRLKDILSDPWTGVSA--PKLNTLILDEADRLLDQGFAPDIAEIQRLLPDPTKVDRQT 282
Query: 569 LLFSATMPKELV------LKREHTYIDTVGLGSVETPVKIKQSCLVA-------PHELHF 615
L+FSAT+P+E++ LK + +++TV + T ++ Q + P L
Sbjct: 283 LMFSATVPREVLQMVRQTLKPDFKHVNTVREDEIPTHKRVPQKVVYTRGLENSLPALLEL 342
Query: 616 QILHHLLKEHILGTPDYKVIVFCSTGMVTSL----LYLLLREMK--------MNVREMYS 663
+++ +K I + ++ T + + R + M + E+ S
Sbjct: 343 AQNWQARRDNGEDLRPFKAIAYFNSTAETKVSADAFNAIARSSEFRQSSMRNMRMLEINS 402
Query: 664 RKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTG 723
R Q +R + ++ FR ++ IL +SDV+ARGMD+PDVT VVQ+G+P DRE YIHRLGRT
Sbjct: 403 RLTQAFRTQSADNFRKAREGILFSSDVTARGMDFPDVTHVVQIGVPRDRETYIHRLGRTA 462
Query: 724 REGKEGEGVLLLAPWE-EYFLDDLKDLPL-----------DKLQ-LPHLNP--EIQLQMD 768
R GKEGEG L + P E + + L PL D Q L +P +I Q+
Sbjct: 463 RAGKEGEGWLFMHPAESDVYRKRLGGFPLKVDTALESADADLTQPLSTDSPVGKIVSQIT 522
Query: 769 NHMAKIDNNVKEAAYHAWLGY----YNSIREIGRDKTTLVELANKFAQSIGLQRPPPLFR 824
+A+ DN K +Y LG +NS RE + L F +Q PP L
Sbjct: 523 EGLAQCDNTTKVKSYMGQLGTSTGNFNSKRE------AIQALNQMFIAGYNMQSPPELNP 576
Query: 825 KTALKMGLKDIPGI 838
+ +MGL I G+
Sbjct: 577 RLMQQMGLSRIDGV 590
>gi|342883876|gb|EGU84298.1| hypothetical protein FOXB_05255 [Fusarium oxysporum Fo5176]
Length = 679
Score = 226 bits (577), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 182/544 (33%), Positives = 269/544 (49%), Gaps = 73/544 (13%)
Query: 351 IRKEISKNKLNGNGEKKEKREEEPILSQKRF-DECGISPLTIKALTA-AGYIQMTRVQEA 408
I + S + E E EP Q RF D GI P +K + Y MT VQ
Sbjct: 52 ITRAYSTEAVAEQNESAPSVEAEP---QVRFADLQGIHPNLLKPIINDMKYDTMTPVQAK 108
Query: 409 TLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLV------PPIYVLILC 462
T+ L+G D V +AKTGTGK+IAFLLP ++ +++ S+ + I +IL
Sbjct: 109 TIQPALKGTDIVAQAKTGTGKTIAFLLPLLQRMIEEDSTLADRTARRQARSDDIRGIILS 168
Query: 463 PTRELASQIAAEAIALLKNHDGIGVLTLVGGT--RFKVDQRRLESDPCQILVATPGRLLD 520
PTRELA QIA EA L+ H G+ V VGGT R + Q R + C +LVATPGRL D
Sbjct: 169 PTRELAEQIAVEARRLVA-HTGLVVQCAVGGTDKRSMLQQTRRQG--CHLLVATPGRLND 225
Query: 521 HIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRR----RQSLLFSATMP 576
+++ G + L LVLDEAD +LD+GF +++ I+ CLPR RQ++L SAT+P
Sbjct: 226 LLQDP-GSGIDAPNLAALVLDEADRMLDVGFERELNEIIKCLPRPEEKVRQTMLVSATIP 284
Query: 577 -------KELVLKREHTYIDTVGLGSVETPVKIKQSCL-VAPHELHFQILHHLLKEH--- 625
+ +V + ++ T+ T K+ Q + V+ F L LL+
Sbjct: 285 DSVIRLARNMVRANDFEFVQTIPENESLTHDKVPQHIVPVSSWAQVFPSLFELLEREAAK 344
Query: 626 ILGTPD---YKVIVFCSTGMVTSLLYLLLREMKMNVRE----------MYSRKPQLYRDR 672
I TP K IV+ +T + L L + + N R M S+ Q+ R R
Sbjct: 345 IRETPGAMPLKAIVYFNTTALVELAGELFYQQRQNARNDGSPYFSSFVMQSKLSQVQRQR 404
Query: 673 ISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGV 732
++ FR ++ +L++SDV+ARGMD+P+VT V+Q+ P +RE YIHRLGRTGR+ KEG+G
Sbjct: 405 AADRFREARTGVLLSSDVTARGMDFPNVTHVIQIDTPRERESYIHRLGRTGRQNKEGQGW 464
Query: 733 LLLAPWE-EYFLDDLKDLPLDKLQ--------------LPHLNPEIQLQMDNHMAKIDNN 777
L++ L+ LP+ + PH L + +
Sbjct: 465 LIIPNSSVRNARKMLQGLPIQQNSSLTSAETDVAGGETTPHHESTKAL-----FGTVPRS 519
Query: 778 VKEAAYHAWLGYYNSIREIGRDKTTLVELANKFAQ-SIGLQRPPPLFRKTALKMGLKDIP 836
+ AY + G N DK ++ E N++ + G ++PP + A K+GL +I
Sbjct: 520 LLATAYMSMFGMAN-------DKVSMAEEVNEWTRLGWGWEKPPSVSHSWAQKLGLANIR 572
Query: 837 GIRL 840
G++L
Sbjct: 573 GMQL 576
>gi|349603726|gb|AEP99487.1| putative ATP-dependent RNA helicase DDX10-like protein, partial
[Equus caballus]
Length = 828
Score = 226 bits (577), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 149/430 (34%), Positives = 240/430 (55%), Gaps = 35/430 (8%)
Query: 380 RFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIE 439
RF + +S T+K L A Y +T +Q+ T+ L+GKD + AKTG+GK++AFL+P +E
Sbjct: 24 RFSDFPLSKKTLKGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLE 83
Query: 440 AVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVD 499
A+ + +ST L VLI+ PTRELA Q + KNHD L ++GG K +
Sbjct: 84 ALYRLQWTSTDGL----GVLIISPTRELAYQTFEVLRKVGKNHDFSAGL-IIGGKDLKHE 138
Query: 500 QRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIV 559
R+ + ILV TPGRLL H++ + L+MLVLDEAD +LD+GF + I+
Sbjct: 139 AERINN--INILVCTPGRLLQHMD--ETICFHATNLQMLVLDEADRILDMGFADTMNAII 194
Query: 560 DCLPRRRQSLLFSATMPKE------LVLKR-EHTYIDTVGLGSVETPVKIKQSCLVAPHE 612
+ LP++RQ+LLFSAT K L LK E+ ++ S TP ++Q+ +V +
Sbjct: 195 ENLPKKRQTLLFSATQTKSVKDLARLSLKNPEYVWVHEKAKYS--TPATLEQNYIVCELQ 252
Query: 613 LHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK--MNVREMYSRKPQLYR 670
+L+ L+ H+ K IVF S+ LY + ++ +++ ++ R+ Q+ R
Sbjct: 253 QKISVLYSFLRSHL----KKKSIVFFSSCKEVQYLYRVFCRLRPGVSILALHGRQQQMRR 308
Query: 671 DRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGE 730
+ EF + +L +D++ARG+D+P V V+Q P D YIHR GRT R ++GE
Sbjct: 309 MEVYNEFVRKRAAVLFATDIAARGLDFPAVNWVLQFDCPEDANTYIHRAGRTARYKEDGE 368
Query: 731 GVLLLAPWEEY-FLDDL--KDLPLDKLQLPHLNPE----IQLQMDNHMAKIDNNVKEAAY 783
+L+L P EE + L K +P+ +++ +NPE +Q ++++ +A+ D ++KE A
Sbjct: 369 ALLILLPSEEKGMVQQLLQKKVPVKEIK---INPEKLIDVQKKLESFLAQ-DQDLKERAQ 424
Query: 784 HAWLGYYNSI 793
++ Y S+
Sbjct: 425 RCFVSYIRSV 434
>gi|66810125|ref|XP_638786.1| hypothetical protein DDB_G0284017 [Dictyostelium discoideum AX4]
gi|74897069|sp|Q54Q94.1|DDX10_DICDI RecName: Full=Probable ATP-dependent RNA helicase ddx10; AltName:
Full=DEAD box protein 10
gi|60467406|gb|EAL65432.1| hypothetical protein DDB_G0284017 [Dictyostelium discoideum AX4]
Length = 878
Score = 226 bits (577), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 155/470 (32%), Positives = 250/470 (53%), Gaps = 25/470 (5%)
Query: 363 NGEKKEKREEEPILSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVK 422
N ++KEK + S F + IS LT+KALT + ++++T +Q A+L L G+D +
Sbjct: 125 NDKEKEKEYKIDYPSATDFKDLPISQLTLKALTESKFLKLTDIQRASLPHTLCGRDILGA 184
Query: 423 AKTGTGKSIAFLLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNH 482
AKTG+GK+++F+LP +E + + I ++L PTRELA QI A+ K H
Sbjct: 185 AKTGSGKTLSFILPILETLWRNRWGRDD----GIGAIVLSPTRELAIQIFDVLKAVGKYH 240
Query: 483 DGIGVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDE 542
L ++GG V Q + + + IL+ATPGRLL H++ G LK+LVLDE
Sbjct: 241 TFSAGL-IIGGRN--VQQEKDKINAMNILIATPGRLLQHMDETYGFDCS--NLKILVLDE 295
Query: 543 ADHLLDLGFRKDVENIVDCLPRRRQSLLFSATMPKEL-----VLKREHTYIDTVGLGSVE 597
AD +LDLGF K + +IV+ LPR RQ+LLFSAT K + + +E YI
Sbjct: 296 ADRILDLGFSKCLNSIVENLPRERQTLLFSATQTKSIRDLARLSLQEPEYISVYEKDITT 355
Query: 598 TPVKIKQSCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK-- 655
TP + Q+ V P E+ +L +K H+ K+IVF ++ + + +
Sbjct: 356 TPQNLTQTLCVIPLEMKLNMLFSFIKTHLTS----KIIVFFASCKQVRFAHETFKLLNPG 411
Query: 656 MNVREMYSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQY 715
+ ++ + Q R + E+F K L +D++ARG+D+P V V+QV P D E Y
Sbjct: 412 TTLFPLHGKMKQWTRLEVFEDFCKKKAGTLFATDIAARGLDFPAVEWVIQVDCPDDIETY 471
Query: 716 IHRLGRTGREGKEGEGVLLLAPWEEYFLDDLKDLPLDKLQLPHLNPEIQLQMDNHMAKI- 774
IHR+GRT R G+ + +L P E+ + +L + K ++ NPE + +D+ ++
Sbjct: 472 IHRVGRTARNDAPGQSITILLPSEKDGMVNLMEKQKMKFEILEPNPEKLVSIDSKLSSFL 531
Query: 775 --DNNVKEAAYHAWLGYYNSI-REIGRDKTTLVEL-ANKFAQSIGLQRPP 820
++K A +++ Y S+ R+ ++ + EL N+F++S+GL P
Sbjct: 532 SEKTDLKYLAQKSFVSYLRSVYRQSNKEIFKIQELNINEFSKSLGLLGTP 581
>gi|121699880|ref|XP_001268205.1| DEAD box RNA helicase (Hca4), putative [Aspergillus clavatus NRRL
1]
gi|134034070|sp|A1CTZ2.1|DBP4_ASPCL RecName: Full=ATP-dependent RNA helicase dbp4
gi|119396347|gb|EAW06779.1| DEAD box RNA helicase (Hca4), putative [Aspergillus clavatus NRRL
1]
Length = 823
Score = 226 bits (577), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 155/454 (34%), Positives = 246/454 (54%), Gaps = 29/454 (6%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F + +S T+ LT++ + +T +Q +S L+G+D + AKTG+GK++AFL+P +E
Sbjct: 51 FSDLPLSEPTLSGLTSSHFKTLTDIQSRAISHALKGRDVLGAAKTGSGKTLAFLVPVLEN 110
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+ + + L LIL PTRELA QI E + + + ++GG + +Q
Sbjct: 111 LYRRQWAEHDGL----GALILSPTRELAIQIF-EVLRKIGRYHTFSAGLVIGGKSLREEQ 165
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
RL ILV TPGR+L H++ + L+MLVLDEAD +LDLGF++ V+ IV
Sbjct: 166 ERLGR--MNILVCTPGRMLQHLDQTALFDT--YNLQMLVLDEADRILDLGFQQTVDAIVG 221
Query: 561 CLPRRRQSLLFSATMPKEL-----VLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHF 615
LP+ RQ+LLFSAT K++ + R+ Y+ S TP K++Q ++AP
Sbjct: 222 HLPKERQTLLFSATQTKKVSDLARLSLRDPEYVAVHETASTATPAKLQQHYVIAPLPQKL 281
Query: 616 QILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK--MNVREMYSRKPQLYRDRI 673
IL ++ ++ K +VF S+G +Y R M+ + + ++ R+ Q R I
Sbjct: 282 DILWSFIRSNL----KSKTMVFFSSGKQVRFVYESFRHMQPGIPLMHLHGRQKQGGRLDI 337
Query: 674 SEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVL 733
F +K +L ++DV+ARG+D+P V V+Q+ P D + YIHR+GRT R G++G VL
Sbjct: 338 MTNFSQAKHCVLFSTDVAARGLDFPAVDWVIQMDCPEDADTYIHRVGRTARYGRDGRAVL 397
Query: 734 LLAPWEEYFL---DDLKDLPLDKLQL-PHLNPEIQLQMDNHMAKIDNNVKEAAYHAWLGY 789
L P EE + + K +P++K+ + + I+ Q+ N M D +K A++ Y
Sbjct: 398 FLDPSEEEGMLKRLEQKKVPIEKINIKANKQQSIKDQLQN-MCFKDPELKYIGQKAFISY 456
Query: 790 YNSIREIGRDKTT--LVELA-NKFAQSIGLQRPP 820
S+ I +DK L EL ++FA S+GL P
Sbjct: 457 VKSVY-IQKDKEIFKLKELKLDEFASSLGLPGAP 489
>gi|145249298|ref|XP_001400988.1| ATP-dependent RNA helicase mss116 [Aspergillus niger CBS 513.88]
gi|134081666|emb|CAK46600.1| unnamed protein product [Aspergillus niger]
gi|350639464|gb|EHA27818.1| hypothetical protein ASPNIDRAFT_41762 [Aspergillus niger ATCC 1015]
Length = 650
Score = 226 bits (577), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 150/425 (35%), Positives = 236/425 (55%), Gaps = 45/425 (10%)
Query: 373 EPILSQKRFDECGISPLT----IKALTAAGYIQ-MTRVQEATLSACLEGKDAVVKAKTGT 427
EP L +F L I+ +T + I+ MT VQ T+ L G D + +AKTGT
Sbjct: 71 EPRLPNSKFHSLAQDGLVNDRLIRTVTNSMKIETMTDVQAKTIRETLSGDDVLAQAKTGT 130
Query: 428 GKSIAFLLPAIEAVLKATSSSTTQL----------VPPIYVLILCPTRELASQIAAEAIA 477
GK++AFL+P ++ ++ S ++ P I +++ PTRELA QIA EA
Sbjct: 131 GKTLAFLIPVVQRLVSDPSVKRSRPSYRGQQGRRNTPDIRAIVISPTRELAEQIAHEAQR 190
Query: 478 LLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENK-SGLSVRLMGLK 536
L+ G+ V T VGGT+ ++ ++ ++ C ILV TPGRL D + + SG++ L+
Sbjct: 191 LVYGL-GLTVQTAVGGTQKRLHLNKIRNEGCNILVGTPGRLKDLLSDPYSGVTA--PQLQ 247
Query: 537 MLVLDEADHLLDLGFRKDVENIVDCLPR----RRQSLLFSATMPKELV------LKREHT 586
LV DEAD LLD GF +++ I D LP RQ+L+FSAT+P E++ +K +
Sbjct: 248 ALVFDEADRLLDDGFSQEIGQIKDLLPNPEEVDRQTLMFSATVPGEVMNMVRQTMKPDFK 307
Query: 587 YIDTVGLGSVETPVKIKQSCL-VAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTS 645
+I TV V T +++ Q + + + + L K+ + +P++K IV+ + + S
Sbjct: 308 FIKTVSEDEVPTHLRVPQKVVYLDGFQNGLPAILELAKQGYVNSPNFKAIVYLNATTMVS 367
Query: 646 LLYLLLREM--------------KMNVREMYSRKPQLYRDRISEEFRASKRLILVTSDVS 691
L + R + ++ + +++SR Q R R++ FR ++ IL +SDV+
Sbjct: 368 LANDIFRRLQNDPEDRTKGHALGRLPILQIHSRLTQAQRTRVTSTFRNARSGILFSSDVT 427
Query: 692 ARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLAPWEE-YFLDDLKDLP 750
ARG+D+PDVT V+Q G+P +R+ YIHR+GRTGR KEGEG +LL E+ F L DLP
Sbjct: 428 ARGLDFPDVTHVIQYGLPSERQTYIHRVGRTGRANKEGEGWILLHNNEKRAFKQMLGDLP 487
Query: 751 LDKLQ 755
+++ Q
Sbjct: 488 IEEDQ 492
>gi|19115564|ref|NP_594652.1| ATP-dependent RNA helicase Hca4 (predicted) [Schizosaccharomyces
pombe 972h-]
gi|74625979|sp|Q9UTP9.1|DBP4_SCHPO RecName: Full=ATP-dependent RNA helicase dbp4
gi|6318264|emb|CAB60250.1| ATP-dependent RNA helicase Hca4 (predicted) [Schizosaccharomyces
pombe]
Length = 735
Score = 226 bits (576), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 150/457 (32%), Positives = 243/457 (53%), Gaps = 32/457 (7%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F E ++ T AL A +I +T +Q+ + + L+G+D + AKTG+GK++AF++P IE
Sbjct: 41 FAELPLTQPTKSALKNAHFITLTEIQKQCIPSALKGRDILGAAKTGSGKTLAFIVPLIEN 100
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+ + +S + + L++ PTRELA Q + + + H L ++GG +K ++
Sbjct: 101 LYRKKWTS----LDGLGALVISPTRELAIQTFETLVKIGRLHSFSAGL-IIGGNNYKEEK 155
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
RL ILV TPGRLL HI+ ++ GL+ML+LDEAD +LD+GFR ++ IV
Sbjct: 156 ERLSR--MNILVCTPGRLLQHIDQ--AVNFDTSGLQMLILDEADRILDMGFRTTLDAIVS 211
Query: 561 CLPRRRQSLLFSATMPKEL-----VLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHF 615
LP RQ++LFSAT K + + + +I + TP + Q L P
Sbjct: 212 SLPVHRQTMLFSATQTKSVKDLARLSLQNPDFISVHENDTSSTPSNLNQFYLTVPLTEKL 271
Query: 616 QILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK--MNVREMYSRKPQLYRDRI 673
IL ++ H+ +K IVF S+ +Y R M+ +++ ++ ++ Q R +
Sbjct: 272 DILFGFIRTHL----KFKTIVFLSSCKQVRFVYETFRRMRPGISLLHLHGKQKQTTRTEV 327
Query: 674 SEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVL 733
+ +F +S+ ++L +D+ ARG+D+P V V+Q+ P D + YIHR+GRT R + G +L
Sbjct: 328 TAKFTSSRHVVLFCTDIVARGLDFPAVDWVIQLDAPEDVDTYIHRVGRTARYNRSGNALL 387
Query: 734 LLAPWEEYFLDDLKDLPLDKLQLPHLN------PEIQLQMDNHMAKIDNNVKEAAYHAWL 787
LL P EE F LK L K+ + +N I+ Q+ N K DN++K A++
Sbjct: 388 LLLPSEEAF---LKRLESKKIAVERINVKDGKKTSIRNQLQNLCFK-DNDIKYIGQKAFI 443
Query: 788 GYYNSIR-EIGRDKTTLVEL-ANKFAQSIGLQRPPPL 822
Y SI + +D L +L FA S+GL P +
Sbjct: 444 SYLRSIYLQKDKDVFQLDKLPVEAFADSLGLPGTPKI 480
>gi|442751645|gb|JAA67982.1| Putative atp-dependent rna helicase pitchoune [Ixodes ricinus]
Length = 589
Score = 226 bits (576), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 176/518 (33%), Positives = 279/518 (53%), Gaps = 46/518 (8%)
Query: 331 KRVPLKSLEDEHD--FEEQVELIRKEISKNKLNGNGEKKEKREEEP-------ILSQKRF 381
++ P+ +ED D +EQ+ +E S++ +N E E+ + EP +LS RF
Sbjct: 39 EQAPVGDVEDIEDDANDEQMPEAEEEESESPVNAKSEDAEEEQAEPLPGTSLGVLSDTRF 98
Query: 382 DECG--ISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIE 439
D +S ++KA+ A G+ QMT +Q T+ LEG+D V AKTG+GK++AFL+PA+E
Sbjct: 99 DSLKGVVSEASLKAVKAMGFTQMTEIQAKTIPHLLEGRDMVAAAKTGSGKTLAFLIPAVE 158
Query: 440 AVLKATSSSTTQLVP--PIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFK 497
+ S + +P L++ PTRELA Q LL H + ++GGT +
Sbjct: 159 LL------SKLKFMPRNGTGALVIAPTRELAMQTFGVLQELL-THQNQTLGLIMGGTSRQ 211
Query: 498 VDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVEN 557
+ +L + LVATPGRLLDH++N S + L+ L++DEAD +LD+GF ++++
Sbjct: 212 SEANKL-AKGVNFLVATPGRLLDHLQNTSEFVYK--NLQCLIIDEADRILDIGFEEEMKQ 268
Query: 558 IVDCLPRRRQSLLFSATMPK------ELVLKREHTYIDTVGLGSVETPVKIKQSCLVAPH 611
I+ LP+RRQ++LFSAT+ K ++ LK E YI T ++Q +V P
Sbjct: 269 ILRLLPKRRQTMLFSATLTKKTEDLVKVALKSEPLYIGLDENKEQATVEGLEQGYVVCPS 328
Query: 612 ELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRD 671
+ F +L LK++ KV+VF S+ + + LL + + V ++ ++ Q R
Sbjct: 329 DKRFLLLFTFLKKN----RKKKVMVFFSSCLSVKYHHELLNYIDLPVMSIHGKQKQAKRT 384
Query: 672 RISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGR-EGKEGE 730
+F + IL+ +DV+ARG+D P+V +VQ P D ++YIHR+GRT R EG G
Sbjct: 385 TTFFQFCNADTGILLCTDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTARGEGGSGH 444
Query: 731 GVLLLAPWEEYFLDDLK--DLPLDKLQLPHLN-PEIQLQMDNHMAK---IDNNVKEAAYH 784
+L+L P E FL LK +PL + + IQ Q++ + K + + KE AY
Sbjct: 445 ALLILRPEEVGFLRYLKVAKVPLQEFEFSWTKIANIQPQLEKLITKNYFLHMSAKE-AYK 503
Query: 785 AWLGYYNS--IREIGRDKTTLVELANKFAQSIGLQRPP 820
A++ Y+S ++ I D TL + + A+S G PP
Sbjct: 504 AYVRAYDSHHLKSI-FDVNTLDLI--QVAKSFGFTVPP 538
>gi|291383932|ref|XP_002708524.1| PREDICTED: DEAD (Asp-Glu-Ala-Asp) box polypeptide 10 [Oryctolagus
cuniculus]
Length = 872
Score = 226 bits (576), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 148/429 (34%), Positives = 237/429 (55%), Gaps = 33/429 (7%)
Query: 380 RFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIE 439
RF + +S T+K L A Y +T +Q+ T+ L+GKD + AKTG+GK++AFL+P +E
Sbjct: 70 RFSDFPLSKKTLKGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLE 129
Query: 440 AVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVD 499
A+ + +ST L VLI+ PTRELA Q + KNHD L ++GG K +
Sbjct: 130 ALYRLQWTSTDGL----GVLIISPTRELAYQTFEVLRKVGKNHDFSAGL-IIGGKDLKHE 184
Query: 500 QRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIV 559
R+ + ILV TPGRLL H++ + L+MLVLDEAD +LD+GF + I+
Sbjct: 185 AERINN--INILVCTPGRLLQHMD--ETICFHATNLQMLVLDEADRILDMGFADTMNAII 240
Query: 560 DCLPRRRQSLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHEL 613
+ LP++RQ+LLFSAT K L LK Y+ TP ++Q+ +V +
Sbjct: 241 ENLPKKRQTLLFSATQTKSVKDLARLSLKNPE-YVWVHEKAKYSTPATLEQNYIVCELQQ 299
Query: 614 HFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK--MNVREMYSRKPQLYRD 671
+L+ L+ H+ K IVF S+ L+ + ++ +++ ++ R+ Q+ R
Sbjct: 300 KISVLYSFLRSHL----KKKSIVFFSSCKEVQYLFRVFCRLRPGISILALHGRQQQMRRM 355
Query: 672 RISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEG 731
+ EF K +L +D++ARG+D+P V V+Q P D YIHR GRT R ++GE
Sbjct: 356 EVYNEFVRKKAAVLFATDIAARGLDFPAVNWVLQYDCPEDANTYIHRAGRTARYKEDGEA 415
Query: 732 VLLLAPWEEY-FLDDL--KDLPLDKLQLPHLNPE----IQLQMDNHMAKIDNNVKEAAYH 784
+L+L P EE + L K +P+ +++ +NPE +Q ++++ +A+ D ++KE A
Sbjct: 416 LLILLPSEEKGMVQQLLQKKVPVKEIK---INPEKLMDVQKRLESFLAQ-DRDLKERAQR 471
Query: 785 AWLGYYNSI 793
++ Y S+
Sbjct: 472 CFVSYIRSV 480
>gi|344287857|ref|XP_003415668.1| PREDICTED: probable ATP-dependent RNA helicase DDX10 [Loxodonta
africana]
Length = 873
Score = 226 bits (575), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 146/429 (34%), Positives = 236/429 (55%), Gaps = 33/429 (7%)
Query: 380 RFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIE 439
RF + +S T+K L A Y +T +Q+ T+ L+GKD + AKTG+GK++AFL+P +E
Sbjct: 70 RFSDFPLSKKTLKGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLE 129
Query: 440 AVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVD 499
A+ + +S L VLI+ PTRELA Q + KNHD L ++GG K +
Sbjct: 130 ALYRLQWTSADGL----GVLIISPTRELAYQTFEVLRKVGKNHDFSAGL-IIGGKDLKHE 184
Query: 500 QRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIV 559
R+ + ILV TPGRLL H++ + L+MLVLDEAD +LD+GF + ++
Sbjct: 185 AERINN--INILVCTPGRLLQHMD--ETICFHATNLQMLVLDEADRILDMGFADTMNAVI 240
Query: 560 DCLPRRRQSLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHEL 613
+ LP++RQ+LLFSAT K L LK Y+ TP ++Q+ +V
Sbjct: 241 ENLPKKRQTLLFSATQTKSVKDLARLSLKNPE-YVWVHEKAKYSTPATLEQNYIVCELHQ 299
Query: 614 HFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK--MNVREMYSRKPQLYRD 671
+L+ ++ H+ K IVF S+ LY + ++ +++ ++ R+ Q+ R
Sbjct: 300 KISVLYSFMRSHL----KKKSIVFFSSCKQVQYLYRVFCRLRPGVSILALHGRQQQMRRM 355
Query: 672 RISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEG 731
+ EF + +L +D++ARG+D+P V V+Q P D YIHR GRT R ++GE
Sbjct: 356 EVYNEFVRKRAAVLFATDIAARGLDFPAVNWVLQFDCPEDANTYIHRAGRTARYKEDGEA 415
Query: 732 VLLLAPWEEY-FLDDL--KDLPLDKLQLPHLNPE----IQLQMDNHMAKIDNNVKEAAYH 784
+L+L P EE + L K +P+++++ +NPE +Q +M++ +A+ D ++KE A
Sbjct: 416 LLILLPSEEKGMVQQLLQKKVPVEEIK---INPEKLIDVQKKMESFLAQ-DQDLKERAQR 471
Query: 785 AWLGYYNSI 793
++ Y S+
Sbjct: 472 CFVSYIRSV 480
>gi|281345859|gb|EFB21443.1| hypothetical protein PANDA_005663 [Ailuropoda melanoleuca]
Length = 752
Score = 225 bits (574), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 160/476 (33%), Positives = 254/476 (53%), Gaps = 47/476 (9%)
Query: 380 RFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIE 439
RF + +S T+K L A Y +T +Q+ T+ L+GKD + AKTG+GK++AFL+P +E
Sbjct: 74 RFSDFPLSKKTLKGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLE 133
Query: 440 AVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVD 499
A+ + +ST L VLI+ PTRELA Q + KNHD L ++GG K +
Sbjct: 134 ALYRLQWTSTDGLG----VLIISPTRELAYQTFEVLRKVGKNHDFSAGL-IIGGKDLKHE 188
Query: 500 QRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIV 559
R+ + ILV TPGRLL H++ + L+MLVLDEAD +LD+GF + I+
Sbjct: 189 AERINN--INILVCTPGRLLQHMDET--ICFHATNLQMLVLDEADRILDMGFADTMNAII 244
Query: 560 DCLPRRRQSLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHEL 613
+ LP++RQ+LLFSAT K L LK Y+ TP ++Q+ +V +
Sbjct: 245 ENLPKKRQTLLFSATQTKSVKDLARLSLKNPE-YVWVHEKAKYSTPATLEQNYIVCELQQ 303
Query: 614 HFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK--MNVREMYSRKPQLYRD 671
+L+ L+ H+ K IVF S+ LY + ++ +++ ++ R+ Q+ R
Sbjct: 304 KISVLYSFLRSHL----KKKSIVFFSSCKEVQYLYRVFCRLRPGISILALHGRQQQMRRM 359
Query: 672 RISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEG 731
+ EF + +L +D++ARG+D+P V V+Q P D YIHR GRT R ++GE
Sbjct: 360 EVYNEFVRKRAAVLFATDIAARGLDFPAVNWVLQFDCPEDANTYIHRAGRTARYKEDGEA 419
Query: 732 VLLLAPWEEY-FLDDL--KDLPLDKLQLPHLNPE----IQLQMDNHMAKIDNNVKEAAYH 784
+L+L P EE + L K +P+ +++ +NPE +Q ++++ +A+ D ++KE A
Sbjct: 420 LLILLPSEEKGMVQQLLQKKVPVKEIK---INPEKLIDVQKKLESFLAQ-DQDLKERAQR 475
Query: 785 AWLGYYNSIREIGRDKTTLVELANKFAQSIGLQRPPPLFRKTALKMGLKDIPGIRL 840
++ Y S+ + +DK NK P P + AL +GL P +R
Sbjct: 476 CFVSYIRSVY-LMKDKEIFD--VNKL--------PIPEY---ALSLGLAVAPRVRF 517
>gi|345562751|gb|EGX45787.1| hypothetical protein AOL_s00140g103 [Arthrobotrys oligospora ATCC
24927]
Length = 740
Score = 225 bits (574), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 162/492 (32%), Positives = 242/492 (49%), Gaps = 69/492 (14%)
Query: 399 YIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLVPPIY- 457
Y MT VQ T+ L G D + +AKTGTGK++AFL+P+I +L + L P Y
Sbjct: 106 YTDMTEVQAKTIPVSLSGADLIARAKTGTGKTLAFLIPSISKLLN------SGLKKPEYP 159
Query: 458 -------------VLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLE 504
+L++ PTRELA QIA +A LL + V +VGGT R
Sbjct: 160 QNINGHKSFADPRILVISPTRELAEQIAKDAF-LLTRGTNLHVSCMVGGTGKSYSIRDYH 218
Query: 505 SDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPR 564
ILVATPGRL D + + S V + L+ L+ DEAD L+ +GF K+V I LP
Sbjct: 219 QRGANILVATPGRLADVLSDPSS-GVDMKNLETLIFDEADSLMSMGFEKEVREIRSYLPE 277
Query: 565 RRQSLLFSATMP---KELV---LKREHTYIDTVGLGSVETPVKIKQSCLVAP-----HEL 613
+Q+L+FSATMP ++L+ ++R +++T+ ET K+ Q ++ H
Sbjct: 278 GKQTLMFSATMPDKVRQLISENMRRGFKFVNTIDPNEAETHTKVPQHVIMCEGMENLHPT 337
Query: 614 HFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKM-----------NVREMY 662
F++LH + +K +VF T L ++ R +++ ++ +++
Sbjct: 338 LFELLHRENDKAKKANESFKAMVFFPTARGAELAAMMFRRVRLPGSEGHPLFPLDLIQIH 397
Query: 663 SRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRT 722
SR Q R + FR + IL +SDV+ARGMD+P+VT V+QVG P +REQYIHR+GRT
Sbjct: 398 SRLTQSRRTEAANAFRRGENAILFSSDVTARGMDFPNVTHVIQVGTPSNREQYIHRIGRT 457
Query: 723 GR----EGKEGEGVLLLAPWEEYFL--------------DDLKDLPLDKLQLPHLNP--- 761
R E G L+L+ + DDL L L+P
Sbjct: 458 ARGKNIESGRSVGYLILSDLDARIALRELRGIDLIHDQNDDLVSKSAKLSDLDTLHPRAS 517
Query: 762 EIQLQMDNHMAKIDNNVKEAAYHAWLGYYNSIREIGRDKTTLV-ELANKFAQSIGLQRPP 820
E + ++D+ + + A+ + +G YN+ G D +V L N + G + PP
Sbjct: 518 EFARAIVEACGRLDSALLKQAWLSSIGAYNT---QGIDGMEIVRSLFNVSKYNFGHEFPP 574
Query: 821 PLFRKTALKMGL 832
P+ R ALKMGL
Sbjct: 575 PVSRDWALKMGL 586
>gi|336388062|gb|EGO29206.1| hypothetical protein SERLADRAFT_412796 [Serpula lacrymans var.
lacrymans S7.9]
Length = 796
Score = 225 bits (574), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 158/449 (35%), Positives = 230/449 (51%), Gaps = 49/449 (10%)
Query: 376 LSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLL 435
L+ K F ++P+ + LT + E + E +D +VKAKTGTGK+ AFL+
Sbjct: 107 LTVKPFTMTSMTPVQAEVLTLLPKLAEPYDPENCEVSSREPRDLLVKAKTGTGKTFAFLV 166
Query: 436 PAIEAVLKATSSSTTQLV---------------------PPIYVLILCPTRELASQIAAE 474
PA+EA +KA + + V + +I+ PTRELA+QIA
Sbjct: 167 PAVEARMKAIDAYGKKAVRDAGLVSDKHIEARAQRQFSREHVGAVIISPTRELATQIANS 226
Query: 475 AIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMG 534
A+ L ++H+ V VGG ++ R I+V TPGR+ D +EN+ ++ +
Sbjct: 227 ALKLTQHHN-FEVRLFVGGASKRMQMRDWMKGRRDIVVTTPGRMRDLLENEPEVAKGISR 285
Query: 535 LKMLVLDEADHLLDLGFRKDVENIVDCLPR--RRQSLLFSATMPKEL------VLKREHT 586
KML+LDEAD LLDLGFR D++ I + +P+ RQ+ LFSAT+ + L + H
Sbjct: 286 CKMLILDEADTLLDLGFRDDIDAIAEYMPKTPERQTFLFSATVSPAIQQVARATLDKNHI 345
Query: 587 YIDTVGLGSVETPVKIKQSCLVAP--HELHFQILHHLLKEHILGTPDYKVIVFCSTGMVT 644
+IDTV I Q V P + +L + + + K+++F T +T
Sbjct: 346 FIDTVPENESNVHAHIAQYHTVLPKASDQLPHVLRLVAHDQLTNPGKSKIMMFFPTTKMT 405
Query: 645 SLLYLLLREM---------KMNVREMYSRKPQLYRDRISEEFRASKR--LILVTSDVSAR 693
L RE+ + V E++S+K R S+ FR K IL++SDVSAR
Sbjct: 406 QLFATYFRELSRKVLPAGRQTRVYEIHSKKSMESRTTTSDMFRNDKTGASILISSDVSAR 465
Query: 694 GMDYPDVTSVVQVGIPPDREQYIHRLGRTGRE-GKEGEGVLLLAPWEEYFLD-DLKDLPL 751
G+DYP VT V+QVGIP +QYIHR+GRTGR+ G G G L+L PWE FL L ++PL
Sbjct: 466 GVDYPGVTRVIQVGIPAGTDQYIHRIGRTGRKGGTNGRGDLVLLPWEIGFLSWQLSEVPL 525
Query: 752 DKLQLPHLNPEIQLQMDNHMAKIDNNVKE 780
P E++ Q+ + AK D N E
Sbjct: 526 K----PVTTNELKSQIKDLCAKYDANPSE 550
>gi|358374223|dbj|GAA90817.1| DEAD box RNA helicase HelA [Aspergillus kawachii IFO 4308]
Length = 648
Score = 225 bits (574), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 149/407 (36%), Positives = 229/407 (56%), Gaps = 39/407 (9%)
Query: 391 IKALTAAGYIQ-MTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSST 449
I+ +T + IQ MT VQ T+ L G D + +AKTGTGK++AFL+P I+ ++ S
Sbjct: 94 IRTVTDSMKIQTMTDVQAKTIRETLSGDDVLAQAKTGTGKTLAFLIPVIQRLVNDPSIKR 153
Query: 450 TQL------VPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRL 503
++ P I +++ PTRELA QIA EA L+ G+ V T VGGT+ ++ ++
Sbjct: 154 SRPGYRGRNPPDIRAIVISPTRELAEQIANEAQRLVSGL-GLAVQTAVGGTQKRLHLNKI 212
Query: 504 ESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLP 563
++ C ILV TPGRL D + + V+ L+ LV DEAD LLD GF +++ I D LP
Sbjct: 213 RTEGCNILVGTPGRLKDLLSDPYS-GVKAPQLQALVFDEADRLLDDGFSQEIGEIKDLLP 271
Query: 564 R----RRQSLLFSATMPKELV------LKREHTYIDTVGLGSVETPVKIKQSCL-VAPHE 612
RQ+L+FSAT+P E++ +K + +I TV V T +++ Q + + +
Sbjct: 272 APEEVDRQTLMFSATVPGEVMDMVRQTMKPDFKFIKTVSEDEVPTHLRVPQKVVYLDGFQ 331
Query: 613 LHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREM--------------KMNV 658
+ L K+ +K IV+ + + SL + R + ++ +
Sbjct: 332 NGLPAILELAKKGYAENSHFKAIVYLNATTMVSLANDIFRRLQNDPEDRTKGHALNRLPI 391
Query: 659 REMYSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHR 718
+++SR Q R R++ FR++ R IL +SDV+ARG+D+PDVT V+Q G+P +R+ YIHR
Sbjct: 392 YQIHSRLTQAQRTRVTSTFRSAYRGILFSSDVTARGLDFPDVTHVIQYGLPNERQTYIHR 451
Query: 719 LGRTGREGKEGEGVLLLAPWEE-YFLDDLKDLPL--DKLQLP--HLN 760
+GRTGR KEGEG +LL E+ F L DLP+ D+ +P H+N
Sbjct: 452 VGRTGRANKEGEGWILLHKNEKRAFKQILGDLPIEEDQTSVPVAHIN 498
>gi|402895161|ref|XP_003910702.1| PREDICTED: probable ATP-dependent RNA helicase DDX10, partial
[Papio anubis]
Length = 778
Score = 225 bits (574), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 158/474 (33%), Positives = 257/474 (54%), Gaps = 44/474 (9%)
Query: 380 RFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIE 439
RF + +S T+K L A Y +T +Q+ T+ L+GKD + AKTG+GK++AFL+P +E
Sbjct: 160 RFSDFPLSKKTLKGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLE 219
Query: 440 AVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVD 499
A+ + +ST L VLI+ PTRELA Q + KNHD L ++GG K +
Sbjct: 220 ALYRLQWTSTDGL----GVLIISPTRELAYQTFEVLRKVGKNHDFSAGL-IIGGKDLKHE 274
Query: 500 QRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIV 559
R+ + ILV TPGRLL H++ +S L+MLVLDEAD +LD+GF + I+
Sbjct: 275 AERINN--INILVCTPGRLLQHMDET--VSFHATDLQMLVLDEADRILDMGFADTMNAII 330
Query: 560 DCLPRRRQSLLFSATMPKEL-----VLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELH 614
+ LP++RQ+LLFSAT K + + ++ Y+ TP ++Q+ +V +
Sbjct: 331 ENLPKKRQTLLFSATQTKSVKDLARLSLKDPEYVWVHEKAKYSTPATLEQNYIVCELQQK 390
Query: 615 FQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK--MNVREMYSRKPQLYRDR 672
+L+ L+ H+ K IVF S+ LY + ++ +++ ++ R+ Q+ R
Sbjct: 391 TSVLYSFLRSHL----KKKSIVFFSSCKEVQYLYRVFCRLRPGISILALHGRQQQMRRME 446
Query: 673 ISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGV 732
+ EF + +L +D++ARG+D+P V V+Q P D YIHR GRT R ++GE +
Sbjct: 447 VYNEFVRKRAAVLFATDIAARGLDFPAVNWVLQFDCPEDANTYIHRAGRTARYKEDGEAL 506
Query: 733 LLLAPWEEYFLDDL--KDLPLDKLQLPHLNPE----IQLQMDNHMAKIDNNVKEAAYHAW 786
L+L P E+ + L K +P+ +++ +NPE +Q ++++ +A+ D ++KE A +
Sbjct: 507 LILLPSEKAMVQQLLQKKVPVKEIK---INPEKLIDVQKKLESFLAQ-DQDLKERAQRCF 562
Query: 787 LGYYNSIREIGRDKTTLVELANKFAQSIGLQRPPPLFRKTALKMGLKDIPGIRL 840
+ Y S+ + +DK F S + P P + AL +GL P IR
Sbjct: 563 VSYIRSVY-LMKDKEV-------FDVS---KLPIPEY---ALSLGLAVAPRIRF 602
>gi|228997517|ref|ZP_04157133.1| ATP-dependent RNA helicase [Bacillus mycoides Rock3-17]
gi|228762256|gb|EEM11186.1| ATP-dependent RNA helicase [Bacillus mycoides Rock3-17]
Length = 433
Score = 225 bits (573), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 140/387 (36%), Positives = 209/387 (54%), Gaps = 24/387 (6%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
K F E GIS L G + T +QE + + GKD + +AKTGTGK++AF+LP +
Sbjct: 2 KNFLELGISETFNHTLRENGIAEATPIQEKAIPVVMAGKDIIGQAKTGTGKTLAFVLPIL 61
Query: 439 EAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
E + +S + LI+ PTRELA QI E +L + + I VL + GG
Sbjct: 62 EKIDPESSD--------VQALIVAPTRELALQITTEIEKMLVHQENINVLAIYGGQDVAQ 113
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
R+L+ + I+VATPGRLLDH+ ++ + L + MLVLDEAD +L GF D+E+I
Sbjct: 114 QMRKLKGN-THIVVATPGRLLDHLRRET---IVLSNVSMLVLDEADQMLHFGFLYDIEDI 169
Query: 559 VDCLPRRRQSLLFSATMPKEL--VLKREHTYIDTVGLGSVETPVK-IKQSCLVAPHELHF 615
++ P +Q++LFSATMPK++ + KR + + + S E V IKQ +
Sbjct: 170 LEETPESKQTMLFSATMPKDIKKLAKRYMKEPEMIQIQSAEVTVNNIKQRVIETTDRAKQ 229
Query: 616 QILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISE 675
L H++ + ++FC T S LY L+ N E++ Q R+R+ +
Sbjct: 230 DALRHVMDR----DQPFLAVIFCRTKRRASKLYDDLKGYGYNCDELHGDLSQGKRERVMK 285
Query: 676 EFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLL 735
FR +K L+ +DV+ARG+D VT V IP D E YIHR+GRTGR G+ G + +
Sbjct: 286 SFRDAKIQYLIATDVAARGLDVEGVTHVFNYDIPEDVESYIHRIGRTGRAGESGLAITFV 345
Query: 736 APWEEYFLDDLK-----DLPLDKLQLP 757
AP +E +L +++ L +L+LP
Sbjct: 346 APKDEMYLKEIEKGIGATLQRQELELP 372
>gi|116003979|ref|NP_001070349.1| probable ATP-dependent RNA helicase DDX10 [Bos taurus]
gi|115305270|gb|AAI23580.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 10 [Bos taurus]
gi|296480316|tpg|DAA22431.1| TPA: DEAD (Asp-Glu-Ala-Asp) box polypeptide 10 [Bos taurus]
Length = 876
Score = 225 bits (573), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 147/429 (34%), Positives = 236/429 (55%), Gaps = 33/429 (7%)
Query: 380 RFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIE 439
RF + +S T+K L A Y +T +Q+ T+ L+GKD + AKTG+GK++AFL+P +E
Sbjct: 70 RFSDFPLSKKTLKGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLE 129
Query: 440 AVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVD 499
A+ + +S L VLI+ PTRELA Q + KNHD L ++GG K +
Sbjct: 130 ALYRLQWTSADGL----GVLIISPTRELAYQTFEVLRKVGKNHDFSAGL-IIGGKDLKHE 184
Query: 500 QRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIV 559
R+ + ILV TPGRLL H++ + L+MLVLDEAD +LD+GF + I+
Sbjct: 185 AERINN--INILVCTPGRLLQHMDE--TICFHATNLQMLVLDEADRILDMGFADTMNAII 240
Query: 560 DCLPRRRQSLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHEL 613
+ LP++RQ+LLFSAT K L LK Y+ TP ++Q+ +V +
Sbjct: 241 ENLPKKRQTLLFSATQTKSVKDLARLSLKNPE-YVWVHEKAKYSTPATLEQNYIVCELQQ 299
Query: 614 HFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK--MNVREMYSRKPQLYRD 671
+L+ L+ H+ K IVF S+ LY + ++ +++ ++ R+ Q+ R
Sbjct: 300 KISVLYSFLRSHL----KKKSIVFFSSCKEVQYLYRVFCRLRPGVSLLALHGRQQQMRRM 355
Query: 672 RISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEG 731
+ EF + +L +D++ARG+D+P V V+Q P D YIHR GRT R ++GE
Sbjct: 356 EVYNEFVRKRAAVLFATDIAARGLDFPAVNWVLQFDCPEDANTYIHRAGRTARYKEDGEA 415
Query: 732 VLLLAPWEEY-FLDDL--KDLPLDKLQLPHLNPE----IQLQMDNHMAKIDNNVKEAAYH 784
+L+L P EE + L K +P+ +++ +NPE +Q ++++ +A+ D ++KE A
Sbjct: 416 LLILLPSEEKGMVQQLLQKKVPVKEIK---INPEKLIDVQKKLESFLAQ-DQDLKERAQR 471
Query: 785 AWLGYYNSI 793
++ Y S+
Sbjct: 472 CFISYIRSV 480
>gi|423610880|ref|ZP_17586741.1| hypothetical protein IIM_01595 [Bacillus cereus VD107]
gi|401248333|gb|EJR54655.1| hypothetical protein IIM_01595 [Bacillus cereus VD107]
Length = 448
Score = 225 bits (573), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 139/372 (37%), Positives = 202/372 (54%), Gaps = 19/372 (5%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
K F E GIS L G + T +QE + L GKD + +AKTGTGK++AF+LP +
Sbjct: 5 KNFLELGISETFNHTLRENGIAEATPIQEKAIPVILSGKDIIGQAKTGTGKTLAFVLPIL 64
Query: 439 EAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
E + +S + LI+ PTRELA QI AE +L + I VL + GG
Sbjct: 65 EKIDPESSD--------VQALIVAPTRELALQITAEIKKMLVQREDINVLAIYGGQDVAQ 116
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
R+L+ + I+VATPGRLLDHI ++ + L L M+VLDEAD +L GF D+E+I
Sbjct: 117 QLRKLKGN-THIVVATPGRLLDHIRRET---IDLSNLSMIVLDEADQMLYFGFLYDIEDI 172
Query: 559 VDCLPRRRQSLLFSATMPKEL--VLKREHTYIDTVGLGSVETPVK-IKQSCLVAPHELHF 615
+D P +Q++LFSATMPK++ + KR + + S E V I+Q +
Sbjct: 173 LDETPDSKQTMLFSATMPKDIKKLAKRYMEEPQMIQVQSEEVTVNTIEQRVIETTDRAKQ 232
Query: 616 QILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISE 675
L ++ + ++FC T + S LY L+ N E++ PQ R+R+ +
Sbjct: 233 DALRFVMDRD----QPFLAVIFCRTKVRASKLYDDLKGFGYNCAELHGDIPQGKRERVMK 288
Query: 676 EFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLL 735
FR +K L+ +DV+ARG+D VT V IP D E YIHR+GRTGR G G + +
Sbjct: 289 SFREAKIQYLIATDVAARGLDVDGVTHVFNYDIPEDVESYIHRIGRTGRAGGSGLAITFV 348
Query: 736 APWEEYFLDDLK 747
A +E FL++++
Sbjct: 349 AAKDERFLEEIE 360
>gi|254573064|ref|XP_002493641.1| Putative nucleolar DEAD box RNA helicase [Komagataella pastoris
GS115]
gi|238033440|emb|CAY71462.1| Putative nucleolar DEAD box RNA helicase [Komagataella pastoris
GS115]
gi|328354532|emb|CCA40929.1| RNA Helicase [Komagataella pastoris CBS 7435]
Length = 766
Score = 225 bits (573), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 151/481 (31%), Positives = 258/481 (53%), Gaps = 34/481 (7%)
Query: 380 RFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIE 439
+F E +S T+ L A +I+MT +Q+ + L+G+D + AKTG+GK++AFL+P IE
Sbjct: 43 KFSELPLSRQTLIGLRGAHFIEMTGIQKEAIPPALQGQDILGAAKTGSGKTLAFLIPLIE 102
Query: 440 AVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVD 499
+L+ + + LI+ PTRELA QI E + + H ++GG FK +
Sbjct: 103 MLLREDWNE----FDGVGALIISPTRELAMQIY-EVLLNIGKHSSFSCGLVIGGKDFKYE 157
Query: 500 QRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIV 559
R+ +L+ TPGRLL H++ + L++ L+ML+LDEAD +LD+GF+K +++I+
Sbjct: 158 SERI--GKINVLIGTPGRLLQHMDQSANLNIN--NLQMLILDEADRILDMGFKKTLDSII 213
Query: 560 DCLPRRRQSLLFSATMPKELV-LKR----EHTYIDTVGLGSVETPVKIKQSCLVAPHELH 614
+P +RQ+LLFSAT K + L R YI++ + TP ++QS +V P
Sbjct: 214 SSIPPQRQTLLFSATQTKSVQDLARLSLTNPKYINSSSDLDLATPDSLEQSYIVVPLNEK 273
Query: 615 FQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK--MNVREMYSRKPQLYRDR 672
L +K H+ K++VF S+ LY R+++ +++ +++ R+ Q R
Sbjct: 274 INTLWSFIKTHL----KSKILVFLSSSKQVHFLYEAFRKLQPGISLMKLHGRQKQTARIE 329
Query: 673 ISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGV 732
+ +F ++ L +DV ARG+D+P + VVQ+ P D YIHR+GR R GKEG+ +
Sbjct: 330 TTVKFSHAQHCCLFATDVVARGLDFPAIDWVVQLDCPEDASTYIHRVGRCARAGKEGKSL 389
Query: 733 LLLAPW-EEYFLDDLKDLPLDKLQLPHLNPEIQLQMDNHMAKIDNNVKEAAY---HAWLG 788
L+L P EE F+ L+ + + ++ + ++ M + E Y A++
Sbjct: 390 LILTPSEEEAFVRRLEAKNIKNISKLNVRGAKKKTIEPQMQALCFKSPELKYLGQKAFIA 449
Query: 789 YYNSI-----REIGRDKTTLVELANKFAQSIGLQRPP--PLFRKTALKMGLKDIPGIRLR 841
Y+ S+ +E+ + + VE ++A+S+GL P L K+A M + + ++ R
Sbjct: 450 YFKSVFIQKDKEVFQVQKLPVE---EYAKSLGLPGAPKIKLLEKSAKAMTEEQLSKLKER 506
Query: 842 K 842
K
Sbjct: 507 K 507
>gi|157818683|ref|NP_001100290.1| probable ATP-dependent RNA helicase DDX10 [Rattus norvegicus]
gi|149041670|gb|EDL95511.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 10 (predicted) [Rattus
norvegicus]
Length = 874
Score = 225 bits (573), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 156/461 (33%), Positives = 249/461 (54%), Gaps = 41/461 (8%)
Query: 380 RFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIE 439
RF + +S T+K L A Y +T +Q+ T+ L+GKD + AKTG+GK++AFL+P +E
Sbjct: 70 RFSDFPLSKKTLKGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLE 129
Query: 440 AVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVD 499
A+ + +ST L VLI+ PTRELA Q + KNHD L ++GG K +
Sbjct: 130 ALYRLQWTSTDGL----GVLIISPTRELAYQTFEVLRKVGKNHDFSAGL-IIGGKDLKHE 184
Query: 500 QRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIV 559
R+ + ILV TPGRLL H++ + L+MLVLDEAD +LD+GF + I+
Sbjct: 185 AERINN--INILVCTPGRLLQHMD--ETICFHATNLQMLVLDEADRILDMGFADTMNAII 240
Query: 560 DCLPRRRQSLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHEL 613
+ LP++RQ+LLFSAT K L LK + Y+ TP ++Q+ ++
Sbjct: 241 ENLPKKRQTLLFSATQTKSVKDLARLSLK-DPEYVWVHEKAKYSTPATLEQNYIICELHQ 299
Query: 614 HFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK--MNVREMYSRKPQLYRD 671
+L L+ H+ K IVF S+ LY + ++ +++ ++ R+ Q+ R
Sbjct: 300 KISVLFSFLRSHLTK----KSIVFFSSCKEVQYLYRVFCRLRPGISILALHGRQQQMRRM 355
Query: 672 RISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEG 731
+ EF + +L +D++ARG+D+P V V+Q P D YIHR GRT R ++GE
Sbjct: 356 EVYNEFVRKRAAVLFATDIAARGLDFPAVNWVLQFDCPEDANTYIHRAGRTARYKEDGEA 415
Query: 732 VLLLAPWEEY-FLDDL--KDLPLDKLQLPHLNPE----IQLQMDNHMAKIDNNVKEAAYH 784
+L+L P EE + L K +P+ +++ +NPE +Q ++++ +A+ D ++KE A
Sbjct: 416 LLILLPSEEQGMVQQLLQKKVPVKEIK---INPEKLIDVQKRLESFLAQ-DQDLKERAQR 471
Query: 785 AWLGYYNSIREIGRDKTTLVELANK-----FAQSIGLQRPP 820
++ Y S+ + +DK NK +A S+GL P
Sbjct: 472 CFVSYIRSVY-LMKDKEVFD--VNKLPITEYALSLGLAVAP 509
>gi|354481236|ref|XP_003502808.1| PREDICTED: probable ATP-dependent RNA helicase DDX10 [Cricetulus
griseus]
gi|344243626|gb|EGV99729.1| putative ATP-dependent RNA helicase DDX10 [Cricetulus griseus]
Length = 877
Score = 225 bits (573), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 148/429 (34%), Positives = 235/429 (54%), Gaps = 33/429 (7%)
Query: 380 RFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIE 439
RF + +S T+K L A Y +T +Q+ T+ L+GKD + AKTG+GK++AFL+P +E
Sbjct: 70 RFSDFPLSKKTLKGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLIPVLE 129
Query: 440 AVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVD 499
A+ + +S L VLI+ PTRELA Q + KNHD L ++GG K +
Sbjct: 130 ALYRLQWTSADGL----GVLIISPTRELAYQTFEVLRKVGKNHDFSAGL-IIGGKDLKHE 184
Query: 500 QRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIV 559
R+ + ILV TPGRLL H++ + L+MLVLDEAD +LD+GF + I+
Sbjct: 185 AERINN--INILVCTPGRLLQHMD--ETICFHATNLQMLVLDEADRILDMGFADTMNAII 240
Query: 560 DCLPRRRQSLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHEL 613
+ LP++RQ+LLFSAT K L LK + YI TP ++Q+ +V
Sbjct: 241 ENLPKKRQTLLFSATQTKSVKDLARLSLK-DPEYIWVHEKAKYSTPATLEQNYIVCELHQ 299
Query: 614 HFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK--MNVREMYSRKPQLYRD 671
+L L+ H+ K IVF S+ LY + ++ +++ ++ R+ Q+ R
Sbjct: 300 KISVLFSFLRSHL----KKKSIVFFSSCKEVQYLYRVFCRLRPGISILALHGRQQQMRRM 355
Query: 672 RISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEG 731
+ EF + +L +D++ARG+D+P V V+Q P D YIHR GRT R ++GE
Sbjct: 356 EVYNEFLRKRAAVLFATDIAARGLDFPAVNWVLQFDCPEDANTYIHRAGRTARYKEDGEA 415
Query: 732 VLLLAPWEEY-FLDDL--KDLPLDKLQLPHLNPE----IQLQMDNHMAKIDNNVKEAAYH 784
+L+L P EE + L K +P+ +++ +NPE +Q ++++ +A+ D ++KE A
Sbjct: 416 LLILLPSEEQGMVQQLLQKKVPVKEIK---INPEKLIDVQKKLESFLAQ-DQDLKERAQR 471
Query: 785 AWLGYYNSI 793
++ Y S+
Sbjct: 472 CFVSYIRSV 480
>gi|398409012|ref|XP_003855971.1| hypothetical protein MYCGRDRAFT_106853 [Zymoseptoria tritici
IPO323]
gi|339475856|gb|EGP90947.1| hypothetical protein MYCGRDRAFT_106853 [Zymoseptoria tritici
IPO323]
Length = 705
Score = 224 bits (572), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 174/508 (34%), Positives = 258/508 (50%), Gaps = 59/508 (11%)
Query: 386 ISPLTIKALTAAGYIQ-MTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKA 444
I P ++ +T ++ MT VQ AT++ L+G D V +AKTGTGK++AFLLP ++ +L
Sbjct: 84 IHPNVVRTITKEMDLETMTEVQAATINEALKGTDVVAQAKTGTGKTMAFLLPILQNILNL 143
Query: 445 TSSSTTQ---------LVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTR 495
+ I LI+ PTRELA QIAAEA L +N G+ V T VGGT+
Sbjct: 144 DPHLAERHHGRRGPRTTADDIRGLIISPTRELAEQIAAEAKRLTRN-TGVIVQTAVGGTQ 202
Query: 496 FKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDV 555
R ++ + C +LV TPGRL D + + V L LVLDEAD LLD GF ++
Sbjct: 203 KSAGLRAIQREGCHLLVGTPGRLKDILSDPYS-RVEAPDLSALVLDEADRLLDSGFWVEI 261
Query: 556 ENIVDCLP----RRRQSLLFSATMPKELV------LKREHTYIDTVGLGSVETPVKIKQS 605
+ I+ LP + RQ+++FSAT+PKE+V LK ++ V T ++ Q+
Sbjct: 262 QEILRMLPTPAEKDRQTMMFSATLPKEVVNLVRQTLKPGFQFVKCVRDDEEPTHTRVPQN 321
Query: 606 CL-VAPHELHFQILHHLLKEHI-----LGTPDYKVIVFCSTGMVTSLLYLLLREMKM--- 656
VA E L L + + G +K IV+ ++ SL L +
Sbjct: 322 VTTVAGLENSMPTLVELCQRGLDAAKEPGARPFKAIVYFNSTAEVSLASSALNALSTPNG 381
Query: 657 --------NVREMYSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGI 708
+ E++++ Q R R +++FR + IL++SDV+ARGMD+P+VT V+QVG+
Sbjct: 382 RDHPWWPARITEIHAKLSQGQRTRAADDFRRATSGILLSSDVTARGMDFPNVTHVIQVGM 441
Query: 709 PPDREQYIHRLGRTGREGKEGEGVLLLAPWE-EYFLDDLKDLPLDK---LQLPHLN---- 760
P REQY+HR+GRT R GKEGEG L++ E + L+ LPL + L++PHL+
Sbjct: 442 PTSREQYVHRIGRTARAGKEGEGWLIMNQIEAQEARSRLRGLPLKQDQILEIPHLDLTKA 501
Query: 761 -------PEIQLQMDNHMAKIDNNVKEAAYHAWLGYYNSIREIGRDKTTLVELANKFAQ- 812
I + ++ + KE Y A LG Y + K LV N A+
Sbjct: 502 ADVPATAGRILSMYQAAIKRVHMSEKEKVYLAQLGVYQWVSR----KQELVAAMNNLARF 557
Query: 813 SIGLQRPPPLFRKTALKMGLKDIPGIRL 840
GL P + A K+ + I G+ +
Sbjct: 558 GWGLSEMPKVPAGLASKLRINRIEGVNI 585
>gi|296121514|ref|YP_003629292.1| DEAD/DEAH box helicase [Planctomyces limnophilus DSM 3776]
gi|296013854|gb|ADG67093.1| DEAD/DEAH box helicase domain protein [Planctomyces limnophilus DSM
3776]
Length = 608
Score = 224 bits (572), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 144/432 (33%), Positives = 225/432 (52%), Gaps = 44/432 (10%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F + ISP + A+TA+GY+ T +Q T+ +EG+D + A+TGTGK+ AF +P ++A
Sbjct: 14 FADLNISPPILSAVTASGYVNPTPIQARTIPLLIEGRDVLGMAQTGTGKTAAFAIPMLQA 73
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+ SSS TQ VLIL PTRELA Q+A N G+ V + GG +++
Sbjct: 74 I--DLSSSATQ------VLILAPTRELAMQVAEAFEKYAANLKGLRVAAIYGGQDYQLQF 125
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
R+L ++V TPGR++DHI S ++L LK LVLDEAD +L +GF +DVE I++
Sbjct: 126 RQLNRG-AHVIVGTPGRVMDHIRRGS---LKLDSLKGLVLDEADEMLRMGFAEDVEWILE 181
Query: 561 CLPRRRQSLLFSATMP--------------KELVLKREHTYIDTVGLGSVETPVKIKQSC 606
P +RQ LFSATMP E+ +KR +T I+Q
Sbjct: 182 QTPSQRQIALFSATMPDSIRRIAQKHLKNPAEITIKRRTATAET-----------IRQRF 230
Query: 607 LVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKP 666
+ P +L +L+ P VI+F T T L L + S P
Sbjct: 231 ITVPPFQKEAVLARILETE----PIDAVIIFVKTKSTTVPLAEFLASQGYRTAALSSDVP 286
Query: 667 QLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREG 726
Q R+RI E ++ + I++ +DV+ARG+D +T V+ +P D E Y+HR+GRTGR G
Sbjct: 287 QAQRERIVEHLKSGRLDIVIATDVAARGLDVQRITHVINFDLPSDSESYVHRIGRTGRAG 346
Query: 727 KEGEGVLLLAPWEEYFLDDLKDL---PLDKLQLPHLNPEIQLQMDNHMAKIDNNVKEAAY 783
++G+ +L L P E + L ++ + P++ +Q+P + +++ +KI +
Sbjct: 347 RQGDTILFLHPRERFQLRRIEQVTRQPIEPMQVPAAAQVNERRIERFKSKIKTALDHRDL 406
Query: 784 HAWLGYYNSIRE 795
A+ G S+++
Sbjct: 407 EAFSGIIESLQK 418
>gi|29351650|gb|AAH49261.1| Ddx10 protein, partial [Mus musculus]
Length = 891
Score = 224 bits (571), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 147/429 (34%), Positives = 236/429 (55%), Gaps = 33/429 (7%)
Query: 380 RFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIE 439
RF + +S T+K L A Y +T +Q+ T+ L+GKD + AKTG+GK++AFL+P +E
Sbjct: 86 RFSDFPLSKKTLKGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLE 145
Query: 440 AVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVD 499
A+ + +ST L VLI+ PTRELA Q + KNHD L ++GG K +
Sbjct: 146 ALYRLQWTSTDGL----GVLIISPTRELAYQTFEVLRKVGKNHDFSAGL-IIGGKDLKHE 200
Query: 500 QRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIV 559
R+ + ILV TPGRLL H++ + L+MLVLDEAD +LD+GF + I+
Sbjct: 201 AERINN--INILVCTPGRLLQHMDE--TICFHATNLQMLVLDEADRILDMGFADTMNAII 256
Query: 560 DCLPRRRQSLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHEL 613
+ LP++RQ+LLFSAT K L LK + Y+ TP ++Q+ ++
Sbjct: 257 ENLPKKRQTLLFSATQTKSVKDLARLSLK-DPEYVWVHEKAKYSTPATLEQNYIICELHQ 315
Query: 614 HFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK--MNVREMYSRKPQLYRD 671
+L L+ H+ K IVF S+ LY + ++ +++ ++ R+ Q+ R
Sbjct: 316 KISVLFSFLRSHL----KKKSIVFFSSCKEVQYLYRVFCRLRPGISILALHGRQQQMRRM 371
Query: 672 RISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEG 731
+ EF + +L +D++ARG+D+P V V+Q P D YIHR GRT R ++GE
Sbjct: 372 EVYNEFVRKRAAVLFATDIAARGLDFPAVNWVLQFDCPEDANTYIHRAGRTARYKEDGEA 431
Query: 732 VLLLAPWEEY-FLDDL--KDLPLDKLQLPHLNPE----IQLQMDNHMAKIDNNVKEAAYH 784
+L+L P EE + L K +P+ +++ +NPE +Q ++++ +A+ D ++KE A
Sbjct: 432 LLILLPSEEQGMVQQLLQKKVPVKEIK---INPEKLIDVQKKLESFLAQ-DQDLKERAQR 487
Query: 785 AWLGYYNSI 793
++ Y S+
Sbjct: 488 CFVSYIRSV 496
>gi|291614701|ref|YP_003524858.1| DEAD/DEAH box helicase domain protein [Sideroxydans lithotrophicus
ES-1]
gi|291584813|gb|ADE12471.1| DEAD/DEAH box helicase domain protein [Sideroxydans lithotrophicus
ES-1]
Length = 450
Score = 224 bits (571), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 139/373 (37%), Positives = 208/373 (55%), Gaps = 14/373 (3%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F + ++P +KALT AGY+ T +Q + LEG D + A+TGTGK+ AF LP ++
Sbjct: 6 FVDLKLAPPILKALTEAGYVTPTPIQAQAIPLALEGHDLMAGAQTGTGKTAAFALPMLQK 65
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+L S+ST+ P+ LIL PTRELA Q+ E++ H + L + GG K
Sbjct: 66 LLPHASASTSPAKHPVRALILVPTRELAVQVE-ESVKAYAKHTNLRSLVVYGGVDIKTQT 124
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
L++ +ILVATPGRLLDHIE K+ V L ++MLVLDEAD +LD+GF ++ I+
Sbjct: 125 PHLKTG-VEILVATPGRLLDHIEQKT---VLLNQVQMLVLDEADRMLDMGFMPALKRILA 180
Query: 561 CLPRRRQSLLFSATMPKELVLKREHTYIDTVGLGSVE----TPVKIKQSCLVAPHELHFQ 616
LPR+RQSL+FSAT E + K +++ L V + I Q + Q
Sbjct: 181 LLPRQRQSLMFSATFSNE-IKKLSEDFMNYPTLIEVARSNASAENITQKVYLVEQSGKHQ 239
Query: 617 ILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEE 676
+L LL+ G +VIVF T + S L L+ ++ ++ K QL R + +
Sbjct: 240 LLAQLLR----GDDAKQVIVFTKTKLTASRLAKQLQREGVSADAIHGDKSQLERMQALDA 295
Query: 677 FRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLA 736
F+ + +L+ +DV+ARG+D + V+ IP E Y+HR+GRTGR G G + L++
Sbjct: 296 FKQGRVAVLIATDVAARGLDIDSLPMVINYEIPHAAEDYVHRIGRTGRAGASGTAISLVS 355
Query: 737 PWEEYFLDDLKDL 749
P EE +L +++ L
Sbjct: 356 PEEEKYLLEIEKL 368
>gi|229005142|ref|ZP_04162865.1| ATP-dependent RNA helicase [Bacillus mycoides Rock1-4]
gi|228756117|gb|EEM05439.1| ATP-dependent RNA helicase [Bacillus mycoides Rock1-4]
Length = 433
Score = 224 bits (571), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 140/387 (36%), Positives = 208/387 (53%), Gaps = 24/387 (6%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
K F E GIS L G + T +QE + + GKD + +AKTGTGK++AF+LP +
Sbjct: 2 KNFLELGISETFNHTLRENGIAEATPIQEKAIPVVMAGKDIIGQAKTGTGKTLAFVLPIL 61
Query: 439 EAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
E + +S + LI+ PTRELA QI E +L + + I VL + GG
Sbjct: 62 EKIDPESSD--------VQALIVAPTRELALQITTEIEKMLVHQENINVLAIYGGQDVAQ 113
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
R+L+ + I+VATPGRLLDH+ ++ + L + MLVLDEAD +L GF D+E+I
Sbjct: 114 QMRKLKGN-THIVVATPGRLLDHLRRET---IVLSNVSMLVLDEADQMLHFGFLYDIEDI 169
Query: 559 VDCLPRRRQSLLFSATMPKEL--VLKREHTYIDTVGLGSVETPVK-IKQSCLVAPHELHF 615
++ P +Q++LFSATMPK++ + KR + + + S E V IKQ +
Sbjct: 170 LEETPESKQTMLFSATMPKDIKKLAKRYMKEPEMIQIQSAEVTVNNIKQRVIETTDRAKQ 229
Query: 616 QILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISE 675
L H++ + ++FC T S LY L+ N E++ Q R+R+ +
Sbjct: 230 DALRHVMDRD----QPFLAVIFCRTKRRASKLYDDLKGYGYNCDELHGDLSQGKRERVMK 285
Query: 676 EFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLL 735
FR +K L+ +DV+ARG+D VT V IP D E YIHR+GRTGR G G + +
Sbjct: 286 SFRDAKIQYLIATDVAARGLDVEGVTHVFNYDIPEDVESYIHRIGRTGRAGGSGLAITFV 345
Query: 736 APWEEYFLDDLK-----DLPLDKLQLP 757
AP +E +L +++ L +L+LP
Sbjct: 346 APKDEMYLKEIEKGIGATLQRQELELP 372
>gi|189491668|ref|NP_084212.2| probable ATP-dependent RNA helicase DDX10 [Mus musculus]
gi|76364168|sp|Q80Y44.2|DDX10_MOUSE RecName: Full=Probable ATP-dependent RNA helicase DDX10; AltName:
Full=DEAD box protein 10
Length = 875
Score = 224 bits (571), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 147/429 (34%), Positives = 236/429 (55%), Gaps = 33/429 (7%)
Query: 380 RFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIE 439
RF + +S T+K L A Y +T +Q+ T+ L+GKD + AKTG+GK++AFL+P +E
Sbjct: 70 RFSDFPLSKKTLKGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLE 129
Query: 440 AVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVD 499
A+ + +ST L VLI+ PTRELA Q + KNHD L ++GG K +
Sbjct: 130 ALYRLQWTSTDGL----GVLIISPTRELAYQTFEVLRKVGKNHDFSAGL-IIGGKDLKHE 184
Query: 500 QRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIV 559
R+ + ILV TPGRLL H++ + L+MLVLDEAD +LD+GF + I+
Sbjct: 185 AERINN--INILVCTPGRLLQHMDE--TICFHATNLQMLVLDEADRILDMGFADTMNAII 240
Query: 560 DCLPRRRQSLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHEL 613
+ LP++RQ+LLFSAT K L LK + Y+ TP ++Q+ ++
Sbjct: 241 ENLPKKRQTLLFSATQTKSVKDLARLSLK-DPEYVWVHEKAKYSTPATLEQNYIICELHQ 299
Query: 614 HFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK--MNVREMYSRKPQLYRD 671
+L L+ H+ K IVF S+ LY + ++ +++ ++ R+ Q+ R
Sbjct: 300 KISVLFSFLRSHL----KKKSIVFFSSCKEVQYLYRVFCRLRPGISILALHGRQQQMRRM 355
Query: 672 RISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEG 731
+ EF + +L +D++ARG+D+P V V+Q P D YIHR GRT R ++GE
Sbjct: 356 EVYNEFVRKRAAVLFATDIAARGLDFPAVNWVLQFDCPEDANTYIHRAGRTARYKEDGEA 415
Query: 732 VLLLAPWEEY-FLDDL--KDLPLDKLQLPHLNPE----IQLQMDNHMAKIDNNVKEAAYH 784
+L+L P EE + L K +P+ +++ +NPE +Q ++++ +A+ D ++KE A
Sbjct: 416 LLILLPSEEQGMVQQLLQKKVPVKEIK---INPEKLIDVQKKLESFLAQ-DQDLKERAQR 471
Query: 785 AWLGYYNSI 793
++ Y S+
Sbjct: 472 CFVSYIRSV 480
>gi|228991413|ref|ZP_04151368.1| ATP-dependent RNA helicase [Bacillus pseudomycoides DSM 12442]
gi|228768343|gb|EEM16951.1| ATP-dependent RNA helicase [Bacillus pseudomycoides DSM 12442]
Length = 433
Score = 224 bits (571), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 140/387 (36%), Positives = 208/387 (53%), Gaps = 24/387 (6%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
K F E GIS L G + T +QE + + GKD + +AKTGTGK++AF+LP +
Sbjct: 2 KNFLELGISETFNHTLRENGIAEATPIQEKAIPVVMAGKDIIGQAKTGTGKTLAFVLPIL 61
Query: 439 EAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
E + +S + LI+ PTRELA QI E +L + + I VL + GG
Sbjct: 62 EKIDPESSD--------VQALIVAPTRELALQITTEIEKMLVHQENINVLAIYGGQDVAQ 113
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
R+L+ + I+VATPGRLLDH+ ++ + L + MLVLDEAD +L GF D+E+I
Sbjct: 114 QMRKLKGN-THIVVATPGRLLDHLRRET---IVLSNVSMLVLDEADQMLHFGFLYDIEDI 169
Query: 559 VDCLPRRRQSLLFSATMPKEL--VLKREHTYIDTVGLGSVETPVK-IKQSCLVAPHELHF 615
++ P +Q++LFSATMPK++ + KR + + + S E V IKQ +
Sbjct: 170 LEETPESKQTMLFSATMPKDIKKLAKRYMKEPEMIQIQSAEVTVNNIKQGIIETTDRTKQ 229
Query: 616 QILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISE 675
L H++ + ++FC T S LY L+ N E++ Q R+R+ +
Sbjct: 230 DALRHVMDRD----QPFLAVIFCRTKRRASKLYDDLKGYGYNCDELHGDLSQGKRERVMK 285
Query: 676 EFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLL 735
FR +K L+ +DV+ARG+D VT V IP D E YIHR+GRTGR G G + +
Sbjct: 286 SFRDAKIQYLIATDVAARGLDVEGVTHVFNYDIPEDVESYIHRIGRTGRAGGSGLAITFV 345
Query: 736 APWEEYFLDDLK-----DLPLDKLQLP 757
AP +E +L +++ L +L+LP
Sbjct: 346 APKDEMYLKEIEKGIGATLQRQELELP 372
>gi|367007158|ref|XP_003688309.1| hypothetical protein TPHA_0N00940 [Tetrapisispora phaffii CBS 4417]
gi|357526617|emb|CCE65875.1| hypothetical protein TPHA_0N00940 [Tetrapisispora phaffii CBS 4417]
Length = 771
Score = 224 bits (571), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 162/495 (32%), Positives = 259/495 (52%), Gaps = 45/495 (9%)
Query: 371 EEEPILSQ-KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGK 429
E +P +S+ K F + +S T+K L A ++++T +Q ++ L+G D + AKTG+GK
Sbjct: 32 EYDPKVSKAKFFKDLPLSSATVKGLNEASFVKVTEIQRDSIPISLKGHDILGAAKTGSGK 91
Query: 430 SIAFLLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLT 489
++AFL+P +E + + S + LI+ PTRELA Q E + + H
Sbjct: 92 TLAFLIPVLEKLYREKWSE----FDGLGALIISPTRELAMQ-TYEVLTKIGTHTSFSAGL 146
Query: 490 LVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDL 549
++GG K + R+ IL+ TPGR+L H++ GLS L+MLVLDEAD LD+
Sbjct: 147 VIGGKDVKFESARISK--INILIGTPGRILQHMDQAVGLSTS--NLQMLVLDEADRCLDM 202
Query: 550 GFRKDVENIVDCLPRRRQSLLFSATMPKEL--VLKREHTYIDTVGLGSV---------ET 598
GF+K ++ IV LP RQ+LLFSAT + L + + T TVG V T
Sbjct: 203 GFQKTLDAIVSNLPPTRQTLLFSATQSQSLTDLARLSLTDYKTVGTQEVINEKNGTAAST 262
Query: 599 PVKIKQSCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK--M 656
P ++QS + IL +K H+ K+IVF S+ +Y R+M+ +
Sbjct: 263 PETLQQSYITVELPDKLDILFSFIKSHLKS----KMIVFLSSSKQVHFVYETFRKMQPGI 318
Query: 657 NVREMYSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYI 716
++ ++ R+ Q R ++F ++++ L +DV ARG+D+P V VVQ+ P D + YI
Sbjct: 319 SLMHLHGRQKQRARTETLDKFSRAQQVCLFATDVVARGIDFPSVDWVVQLDCPEDVDTYI 378
Query: 717 HRLGRTGREGKEGEGVLLLAPWEEYFLDDLKDLPLDKLQLPHLNPE------IQLQMDNH 770
HR+GR+ R GK+G+ +++L P E+ LK L + K++ LN + I+ Q+ +
Sbjct: 379 HRVGRSARYGKQGKSLIMLTPQEQDAF--LKRLQMRKIEPSKLNIKQSKKRSIKAQLQSL 436
Query: 771 MAKIDNNVKEAAYHAWLGYYNSIREIGRDKTTLV--EL-ANKFAQSIGLQRPPPLFRKTA 827
+ ID +K A++ Y SI I +DK E+ +FA S+GL P + K
Sbjct: 437 LF-IDPELKYLGQKAFISYIRSIY-IQKDKEVFKFDEIPTEEFAASLGLPGAPKIKMK-- 492
Query: 828 LKMGLKDIPGIRLRK 842
G+K + +L K
Sbjct: 493 ---GMKSVQQSKLLK 504
>gi|193290168|ref|NP_001123270.1| pitchoune [Nasonia vitripennis]
Length = 643
Score = 224 bits (571), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 156/450 (34%), Positives = 253/450 (56%), Gaps = 35/450 (7%)
Query: 390 TIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSST 449
T+KA+ G+ MT +Q ++ LEG+D V AKTG+GK+++FL+PA+E + K
Sbjct: 152 TLKAIAEMGFTDMTEIQAMSIPPLLEGRDLVGAAKTGSGKTLSFLIPAVELIYK------ 205
Query: 450 TQLVP--PIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDP 507
+ +P +I+ PTREL+ Q L+K H L L+GG + + ++L S
Sbjct: 206 LKFMPRNGTGCIIISPTRELSMQTFGVLKELMKYHYHTYGL-LMGGASRQTEAQKL-SKG 263
Query: 508 CQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQ 567
I+VATPGRLLDH++N + L+ L++DEAD +LD+GF ++++ I++ LP+RRQ
Sbjct: 264 VNIVVATPGRLLDHLQNTPDFLYK--NLQCLIIDEADRILDIGFEEELKQIINILPKRRQ 321
Query: 568 SLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILHHL 621
++LFSAT K+ L +K+E Y+ T ++Q + P E F +L
Sbjct: 322 TMLFSATQTKKTEALTTLAVKKEPVYVGVDDEKEKATVEGLEQGYVACPSEKRFLLLFTF 381
Query: 622 LKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEFRASK 681
LK++ KV+VF S+ M + LL + + V ++ ++ Q R +F ++
Sbjct: 382 LKKN----RQKKVMVFFSSCMSVKYHHELLNYIDLPVMSIHGKQKQTKRTTTFFQFCNAQ 437
Query: 682 RLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGR-EGKEGEGVLLLAPWEE 740
IL+ +DV+ARG+D PDV +VQ P D ++YIHR+GRT R EG G +L+L P E
Sbjct: 438 SGILLCTDVAARGLDIPDVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHALLILRPEEL 497
Query: 741 YFLDDLKD--LPLDKLQLP-HLNPEIQLQMDNHMAK---IDNNVKEAAYHAWLGYYNS-- 792
FL LK +P+++ + + +IQLQM+ ++K ++ + KE A+ A++ Y+S
Sbjct: 498 GFLRYLKQARVPVNEFEFSWNKIADIQLQMEKLISKNYFLNMSAKE-AFKAYVRAYDSHH 556
Query: 793 IREIGRDKTTLVELANKFAQSIGLQRPPPL 822
+++I D TL K A+S G PP +
Sbjct: 557 LKQIF-DVETLD--LTKVAKSFGFTTPPAV 583
>gi|426244481|ref|XP_004016050.1| PREDICTED: probable ATP-dependent RNA helicase DDX10 [Ovis aries]
Length = 878
Score = 224 bits (571), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 147/429 (34%), Positives = 236/429 (55%), Gaps = 33/429 (7%)
Query: 380 RFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIE 439
RF + +S T+K L A Y +T +Q+ T+ L+GKD + AKTG+GK++AFL+P +E
Sbjct: 70 RFSDFPLSKKTLKGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLE 129
Query: 440 AVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVD 499
A+ + +S L VLI+ PTRELA Q + KNHD L ++GG K +
Sbjct: 130 ALYRLQWTSADGL----GVLIISPTRELAYQTFEVLRKVGKNHDFSAGL-IIGGKDLKHE 184
Query: 500 QRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIV 559
R+ + ILV TPGRLL H++ + L+MLVLDEAD +LD+GF + I+
Sbjct: 185 AERINN--INILVCTPGRLLQHMDE--TICFHATNLQMLVLDEADRILDMGFADTMNAII 240
Query: 560 DCLPRRRQSLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHEL 613
+ LP++RQ+LLFSAT K L LK Y+ TP ++Q+ +V +
Sbjct: 241 ENLPKKRQTLLFSATQTKSVKDLARLSLKNPE-YVWVHEKAKYSTPATLEQNYIVCELQQ 299
Query: 614 HFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK--MNVREMYSRKPQLYRD 671
+L+ L+ H+ K IVF S+ LY + ++ +++ ++ R+ Q+ R
Sbjct: 300 KISVLYSFLRSHL----KKKSIVFFSSCKEVQYLYRVFCRLRPGVSLLALHGRQQQMRRM 355
Query: 672 RISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEG 731
+ EF + +L +D++ARG+D+P V V+Q P D YIHR GRT R ++GE
Sbjct: 356 EVYNEFVRKRAAVLFATDIAARGLDFPAVNWVLQFDCPEDANTYIHRAGRTARYKEDGEA 415
Query: 732 VLLLAPWEEY-FLDDL--KDLPLDKLQLPHLNPE----IQLQMDNHMAKIDNNVKEAAYH 784
+L+L P EE + L K +P+ +++ +NPE +Q ++++ +A+ D ++KE A
Sbjct: 416 LLILLPSEEKGMVQQLLQKKVPVKEIK---INPEKLIDVQKKLESFLAQ-DQDLKERAQR 471
Query: 785 AWLGYYNSI 793
++ Y S+
Sbjct: 472 CFVSYIRSV 480
>gi|440894340|gb|ELR46816.1| Putative ATP-dependent RNA helicase DDX10, partial [Bos grunniens
mutus]
Length = 773
Score = 224 bits (570), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 147/429 (34%), Positives = 236/429 (55%), Gaps = 33/429 (7%)
Query: 380 RFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIE 439
RF + +S T+K L A Y +T +Q+ T+ L+GKD + AKTG+GK++AFL+P +E
Sbjct: 70 RFSDFPLSKKTLKGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLE 129
Query: 440 AVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVD 499
A+ + +S L VLI+ PTRELA Q + KNHD L ++GG K +
Sbjct: 130 ALYRLQWTSADGL----GVLIISPTRELAYQTFEVLRKVGKNHDFSAGL-IIGGKDLKHE 184
Query: 500 QRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIV 559
R+ + ILV TPGRLL H++ + L+MLVLDEAD +LD+GF + I+
Sbjct: 185 AERINN--INILVCTPGRLLQHMDE--TICFHATNLQMLVLDEADRILDMGFADTMNAII 240
Query: 560 DCLPRRRQSLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHEL 613
+ LP++RQ+LLFSAT K L LK Y+ TP ++Q+ +V +
Sbjct: 241 ENLPKKRQTLLFSATQTKSVKDLARLSLKNPE-YVWVHEKAKYSTPATLEQNYIVCELQQ 299
Query: 614 HFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK--MNVREMYSRKPQLYRD 671
+L+ L+ H+ K IVF S+ LY + ++ +++ ++ R+ Q+ R
Sbjct: 300 KISVLYSFLRSHL----KKKSIVFFSSCKEVQYLYRVFCRLRPGVSLLALHGRQQQMRRM 355
Query: 672 RISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEG 731
+ EF + +L +D++ARG+D+P V V+Q P D YIHR GRT R ++GE
Sbjct: 356 EVYNEFVRKRAAVLFATDIAARGLDFPAVNWVLQFDCPEDANTYIHRAGRTARYKEDGEA 415
Query: 732 VLLLAPWEEY-FLDDL--KDLPLDKLQLPHLNPE----IQLQMDNHMAKIDNNVKEAAYH 784
+L+L P EE + L K +P+ +++ +NPE +Q ++++ +A+ D ++KE A
Sbjct: 416 LLILLPSEEKGMVQQLLQKKVPVKEIK---INPEKLIDVQKKLESFLAQ-DQDLKERAQR 471
Query: 785 AWLGYYNSI 793
++ Y S+
Sbjct: 472 CFVSYIRSV 480
>gi|345489122|ref|XP_001604385.2| PREDICTED: probable ATP-dependent RNA helicase pitchoune-like
[Nasonia vitripennis]
Length = 643
Score = 224 bits (570), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 154/450 (34%), Positives = 253/450 (56%), Gaps = 35/450 (7%)
Query: 390 TIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSST 449
T+KA+ G+ MT +Q ++ LEG+D V AKTG+GK+++FL+PA+E + K
Sbjct: 152 TLKAIAEMGFTDMTEIQAMSIPPLLEGRDLVGAAKTGSGKTLSFLIPAVELIYK------ 205
Query: 450 TQLVP--PIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDP 507
+ +P +I+ PTREL+ Q L+K H L L+GG + + ++L S
Sbjct: 206 LKFMPRNGTGCIIISPTRELSMQTFGVLKELMKYHYHTYGL-LMGGASRQTEAQKL-SKG 263
Query: 508 CQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQ 567
I+VATPGRLLDH++N + L+ L++DEAD +LD+GF ++++ I++ LP+RRQ
Sbjct: 264 VNIVVATPGRLLDHLQNTPDFLYK--NLQCLIIDEADRILDIGFEEELKQIINILPKRRQ 321
Query: 568 SLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILHHL 621
++LFSAT K+ L +K+E Y+ T ++Q + P E F +L
Sbjct: 322 TMLFSATQTKKTEALTTLAVKKEPVYVGVDDEKEKATVEGLEQGYVACPSEKRFLLLFTF 381
Query: 622 LKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEFRASK 681
LK++ KV+VF S+ M + LL + + V ++ ++ Q R +F ++
Sbjct: 382 LKKN----RQKKVMVFFSSCMSVKYHHELLNYIDLPVMSIHGKQKQTKRTTTFFQFCNAQ 437
Query: 682 RLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGR-EGKEGEGVLLLAPWEE 740
IL+ +DV+ARG+D PDV +VQ P D ++YIHR+GRT R EG G +L+L P E
Sbjct: 438 SGILLCTDVAARGLDIPDVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHALLILRPEEL 497
Query: 741 YFLDDLKD--LPLDKLQLP-HLNPEIQLQMDNHMAK---IDNNVKEAAYHAWLGYYNS-- 792
FL LK +P+++ + + +IQLQM+ ++K ++ + KE A+ A++ Y+S
Sbjct: 498 GFLRYLKQARVPVNEFEFSWNKIADIQLQMEKLISKNYFLNMSAKE-AFKAYVRAYDSHH 556
Query: 793 IREIGRDKTTLVELANKFAQSIGLQRPPPL 822
+++I +T + K A+S G PP +
Sbjct: 557 LKQIFDVETLDL---TKVAKSFGFTVPPAV 583
>gi|189191234|ref|XP_001931956.1| ATP-dependent RNA helicase mss116, mitochondrial precursor
[Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187973562|gb|EDU41061.1| ATP-dependent RNA helicase mss116, mitochondrial precursor
[Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 679
Score = 224 bits (570), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 169/469 (36%), Positives = 254/469 (54%), Gaps = 52/469 (11%)
Query: 402 MTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQL-------VP 454
MT VQ T++ L G D + +AKTGTGK++ FL+P I+ +++A S +
Sbjct: 106 MTDVQTRTINEALSGVDVIAQAKTGTGKTLGFLIPVIQRIIQADPSLADKPRGYKRAKAD 165
Query: 455 PIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILVAT 514
I +++ PTRELA QIA EA + + GI V VGGTR + + + + C +++AT
Sbjct: 166 DIRAIVMSPTRELAEQIAVEA-KKVTSGTGIIVQCAVGGTRKREMLVKTQREGCHLMIAT 224
Query: 515 PGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPR----RRQSLL 570
PGRL D + + ++ L VLDEAD LLD GF K+++ I LP RQ+L+
Sbjct: 225 PGRLYDILSDPYS-GIKAPRLNAFVLDEADRLLDDGFTKEIDEIKKILPDPEEVERQNLM 283
Query: 571 FSATMPKELV------LKREHTYIDTVGLGSVETPVKIKQS-CLVAPHELHFQILHHLL- 622
FSAT+P+ +V ++ + V T +I Q ++A E L+ L+
Sbjct: 284 FSATIPRNVVDLVRRTMRPGFHFAKCVDENEEPTHERIPQKIVMLAGFENIIPTLYELVC 343
Query: 623 KEHIL----GTPDYKVIV-FCSTGMVT---SLLYLLLREMK--------MNVREMYSRKP 666
KE G+ +K IV F ST VT S+ Y L +K + E++++
Sbjct: 344 KEQAEAQRGGSRPFKAIVYFNSTAEVTLAASVFYKLNGGLKRGNSPLGGLRNFEIHAKLS 403
Query: 667 QLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREG 726
Q R R +++FR +K +L +SDV+ARGMD+P+VT V+Q+G+P DR+ YIHRLGRTGR G
Sbjct: 404 QAQRTRAADDFRTAKSGVLFSSDVTARGMDFPEVTHVIQIGLPRDRDSYIHRLGRTGRAG 463
Query: 727 KEGEGVLLLAPWEEYFL-DDLKDLPLD----KLQLPHLNPEIQLQMDNHMAKIDNNVKEA 781
KEGEG L L P+E+ + L+DLPL +L + L+ + ++ + +I EA
Sbjct: 464 KEGEGWLFLTPFEKQEVRRRLRDLPLTDSTKELNIAALDMSQESEIPEDINQILQQCVEA 523
Query: 782 ---AY-----HAWLGYYNSIREIGRDKTTLVELANKFAQ-SIGLQRPPP 821
Y A+ G + S + G DK LVE AN+ A+ G++ PPP
Sbjct: 524 HKKVYPDQLDAAFRGLFGSYQWYG-DKHGLVEGANRLAEFGWGMETPPP 571
>gi|380484207|emb|CCF40149.1| DEAD/DEAH box helicase [Colletotrichum higginsianum]
Length = 679
Score = 224 bits (570), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 167/481 (34%), Positives = 252/481 (52%), Gaps = 45/481 (9%)
Query: 399 YIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLV----- 453
Y MT VQ T+ L+G D V +AKTGTGK++AFL+P ++ +L+A S T+
Sbjct: 101 YENMTSVQSMTIEPALKGMDLVAQAKTGTGKTLAFLVPVLQRMLEADPSLATRRARFSAD 160
Query: 454 -PPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILV 512
I +I+ PTRELA QIA EA L N G+ V VGGTR R + C +LV
Sbjct: 161 AGDIRGIIISPTRELAEQIAIEAQKLCGN-TGLVVQRAVGGTRKDEMLARTRREGCHLLV 219
Query: 513 ATPGRLLDHIEN-KSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLP----RRRQ 567
TPGRL D + + SG++ L +VLDEAD +LD+GF K++ IV LP RQ
Sbjct: 220 GTPGRLNDLLSDVHSGIAA--PNLAAIVLDEADRMLDVGFEKELRQIVGHLPDPTVTPRQ 277
Query: 568 SLLFSATMPKELV-LKREHT------YIDTVGLGSVETPVKIKQSCLVAPHELHFQILHH 620
+LLFSAT+PK ++ L RE +I T+ V T K+ Q + + +
Sbjct: 278 TLLFSATIPKNVISLAREWVRPDNFDFIQTISDDDVLTHEKVAQYAVNCRGWGNVMPTLY 337
Query: 621 LLKEHIL----GTPD---YKVIVFCSTGMVTSLL-----YLLLREMKMNVREMYSRKPQL 668
L E+ L PD +K +VF T ++ ++ ++ ++S+ Q
Sbjct: 338 ELMENELEKRKNNPDMMPFKALVFLPTSAWVDVVGDVDERMVYSRNQVPSWRIHSKLSQA 397
Query: 669 YRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKE 728
R R +E+FR +K IL ++DV+ARG+D+P+VT V+Q+G P +REQYIHRLGRTGR K+
Sbjct: 398 ARTRAAEKFRGAKSAILFSTDVTARGLDFPNVTHVIQIGTPSEREQYIHRLGRTGRAEKD 457
Query: 729 GEGVLLLAPWEEYFLD--DLKDLP------LDKLQLPHLNPEIQLQMDNHMAKIDNNVKE 780
GEG +++ P E L +L+ LP L+ Q + ++ + +I + + E
Sbjct: 458 GEGWIII-PQSELDLARRELRGLPIKPVTSLEAAQFDFSSGAQPSELTAKVTEISSQLSE 516
Query: 781 AAYH-AWLGYYNSIREIGRDKTTLVELANKFAQSIGLQRPPPLFRKTALKMGLKDIPGIR 839
A+L + +++ + K EL F ++ + P + A K GL+ I GI
Sbjct: 517 DTLQAAYLSLFGQSKDLAQPKAD--ELYEWFVHAMKMDNTPAISAAMAEKRGLRRIRGIN 574
Query: 840 L 840
+
Sbjct: 575 I 575
>gi|432106970|gb|ELK32488.1| Putative ATP-dependent RNA helicase DDX10 [Myotis davidii]
Length = 836
Score = 224 bits (570), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 147/429 (34%), Positives = 237/429 (55%), Gaps = 33/429 (7%)
Query: 380 RFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIE 439
RF + +S T+K L A Y +T +Q+ T+ L+GKD + AKTG+GK++AFL+P +E
Sbjct: 34 RFSDFPLSKKTLKGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLE 93
Query: 440 AVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVD 499
A+ + +ST L VLI+ PTRELA Q + KNHD L ++GG K +
Sbjct: 94 ALYRLQWTSTDGL----GVLIISPTRELAYQTFEVLRKVGKNHDFSAGL-IIGGKDLKHE 148
Query: 500 QRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIV 559
R+ + ILV TPGRLL H++ + L+MLVLDEAD +LD+GF + I+
Sbjct: 149 AERINN--INILVCTPGRLLQHMD--ETICFHATNLQMLVLDEADRILDMGFADTMNAII 204
Query: 560 DCLPRRRQSLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHEL 613
+ LP++RQ+LLFSAT K L LK Y+ TP ++Q+ +V +
Sbjct: 205 ENLPKKRQTLLFSATQTKSVKDLARLSLKNPE-YVWVHEKAKYSTPATLEQNYIVCQLQQ 263
Query: 614 HFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK--MNVREMYSRKPQLYRD 671
+L+ LK H+ K IVF S+ L+ + ++ +++ ++ R+ Q+ R
Sbjct: 264 KISVLYSFLKSHL----KKKSIVFFSSCKEVQYLFRVFCRLRPGISILALHGRQQQMRRM 319
Query: 672 RISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEG 731
+ EF + +L +D++ARG+D+P V V+Q P D YIHR GRT R ++GE
Sbjct: 320 EVYNEFVRKRAAVLFATDIAARGLDFPAVNWVLQFDCPEDANTYIHRAGRTARYKEDGEA 379
Query: 732 VLLLAPWEEY-FLDDL--KDLPLDKLQLPHLNPE----IQLQMDNHMAKIDNNVKEAAYH 784
+L+L P EE + L + +P+ +++ +NPE +Q ++++ +A+ D ++KE A
Sbjct: 380 LLILLPSEEKGMVQQLLQRKVPVKEIK---INPEKLIDVQKKLESFLAQ-DQDLKERAQR 435
Query: 785 AWLGYYNSI 793
++ Y S+
Sbjct: 436 CFVSYIRSV 444
>gi|303288912|ref|XP_003063744.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226454812|gb|EEH52117.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 577
Score = 224 bits (570), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 158/462 (34%), Positives = 248/462 (53%), Gaps = 34/462 (7%)
Query: 375 ILSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFL 434
ILS K F +S T+ + GY MT VQ T+ L G+D + A+TG+GK++AFL
Sbjct: 69 ILSDKTFASLSLSKPTMAGIATMGYETMTEVQARTIPPLLAGRDVLGAARTGSGKTLAFL 128
Query: 435 LPAIEAVLKATSSSTTQLVP--PIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVG 492
+P++E + A + +P V+IL PTRELA QI L+ H L ++G
Sbjct: 129 VPSVELLYHA------KFMPRNGAGVMILTPTRELALQIYNVTQQLMTKHSQTHGL-IIG 181
Query: 493 GTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFR 552
G + + +L +LVATPGRLLDH++N G + LK+ +DEAD +LD+GF
Sbjct: 182 GANRRAEAEKLVKG-VNLLVATPGRLLDHMQNTKGFT--FSSLKIFCMDEADRMLDIGFE 238
Query: 553 KDVENIVDCLPRRRQSLLFSATMPKEL-----VLKREHTYIDTVGLGSVETPVKIKQSCL 607
+++ IV +P+ RQ++LFSAT ++ + + TYI +V T ++Q
Sbjct: 239 EEMRTIVKMIPKDRQTMLFSATQTTKVEDLARLSLKSPTYIGVDDARAVSTATGVEQGYC 298
Query: 608 VAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQ 667
V P E F +L LK+++ KV+VF S+ LL + + V +++ ++ Q
Sbjct: 299 VVPSEKRFLLLFTFLKKNL----KKKVMVFFSSCNSVKYHAELLNYIDIPVSDIHGKQKQ 354
Query: 668 LYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGK 727
R EF ++R +L+ +DV+ARG+D PDV ++Q P D ++YIHR+GRT R G
Sbjct: 355 QRRTTTFFEFCKAERGVLLCTDVAARGLDIPDVDWIIQFDPPDDPKEYIHRVGRTAR-GT 413
Query: 728 EGEG--VLLLAPWEEYFLDDLK--DLPLDKLQLPHLN-PEIQLQMDNHMAK---IDNNVK 779
+G G +L L P E FL LK +PL++ + P+ +Q Q++ + K + + +
Sbjct: 414 DGRGRALLFLIPEELAFLKYLKAAKVPLNEYEFPNKKIANVQSQLEKLVEKNYYLHQSAR 473
Query: 780 EAAYHAWLGYYNSIREIGRDKTTLVEL-ANKFAQSIGLQRPP 820
+ AY A++ YNS +D + EL + A S G RPP
Sbjct: 474 D-AYRAYILAYNS--HTLKDVYNVHELNLAQVATSFGFHRPP 512
>gi|302666595|ref|XP_003024895.1| DEAD box RNA helicase HelA, putative [Trichophyton verrucosum HKI
0517]
gi|291188971|gb|EFE44284.1| DEAD box RNA helicase HelA, putative [Trichophyton verrucosum HKI
0517]
Length = 643
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 160/473 (33%), Positives = 243/473 (51%), Gaps = 51/473 (10%)
Query: 319 SASLGKYDMKITKRVPLKSLEDEHDFEEQVELIRKEISKNKLNGNGEKKEKREEEPILSQ 378
+++L K+ ++ R+P+ L F + + N ++ E E I
Sbjct: 23 TSTLAKHSIR---RLPIAPLLTSRAFHSSPQF---RVPAGTANAGVAVEDAGEAELITEF 76
Query: 379 KRFDECGI-SPLTIKALT-AAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLP 436
E G+ I A+T G MT VQ T++ ++G D + +AKTGTGK++AFLLP
Sbjct: 77 AELGEKGVVDQRLINAITKGMGLKTMTDVQAQTINESIQGIDMIAQAKTGTGKTVAFLLP 136
Query: 437 AIEAVLKATSSSTTQL----VPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVG 492
I +L+ + + I +++ PTRELA QIA EA + + G+ V T VG
Sbjct: 137 VIHRILQDPTLGNLRRNFASAQDIRAVVISPTRELAEQIAVEAQKITRG-SGLKVQTAVG 195
Query: 493 GTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFR 552
GTR + RL+ + C ILV TPGRL+D + + V L+ VLDEAD LLD+GF
Sbjct: 196 GTRKREGLMRLQREGCHILVGTPGRLMDLFSDPTS-GVAAPKLQAFVLDEADRLLDIGFA 254
Query: 553 KDVENIVDCLPRR----RQSLLFSATMPKEL------VLKREHTYIDTVGLGSVETPVKI 602
D+E I P R RQ+L+FSAT+PK + +LK + T+++TVG ETP +
Sbjct: 255 PDIERIQSFFPSRSQVDRQTLMFSATIPKSVKGLARSMLKPDFTFVNTVG---DETPTHL 311
Query: 603 K---QSCLVAPHELHFQILHHLLKEHI---LGTPD----YKVIVFCSTGMVTSL----LY 648
+ ++ + E L + K + PD +K +V+ + S+
Sbjct: 312 RVPQRAVFLRGFENQLPALFEIAKRAVQAHAANPDTAMPFKAVVYYGSTAEVSVARRAFT 371
Query: 649 LLLREM---------KMNVREMYSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPD 699
L R++ ++ EM+SR Q R S+ FR + IL +SDV+ARGMD+P+
Sbjct: 372 ALCRDLESLYTGRAPRIQTIEMHSRLTQAQRTFNSDSFRRATTGILFSSDVTARGMDFPN 431
Query: 700 VTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLAPWE-EYFLDDLKDLPL 751
V+ V+Q+G+P D + YIHRLGRT R K GEG +L E + F + L+ LP+
Sbjct: 432 VSHVIQMGVPNDTDTYIHRLGRTARADKTGEGWILFPDIEFDAFGEKLRSLPI 484
>gi|302503302|ref|XP_003013611.1| DEAD box RNA helicase HelA, putative [Arthroderma benhamiae CBS
112371]
gi|291177176|gb|EFE32971.1| DEAD box RNA helicase HelA, putative [Arthroderma benhamiae CBS
112371]
Length = 647
Score = 223 bits (569), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 160/473 (33%), Positives = 243/473 (51%), Gaps = 51/473 (10%)
Query: 319 SASLGKYDMKITKRVPLKSLEDEHDFEEQVELIRKEISKNKLNGNGEKKEKREEEPILSQ 378
+++L K+ ++ R+P+ L F + + N ++ E E I
Sbjct: 23 TSTLAKHSIR---RLPIAPLLTSRGFHASPQF---RVPAGTANAGVAVEDAGEAELITEF 76
Query: 379 KRFDECGI-SPLTIKALT-AAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLP 436
E G+ I A+T G MT VQ T++ ++G D + +AKTGTGK++AFLLP
Sbjct: 77 AELGEKGVVDQRLINAITKGMGLKTMTDVQAQTINESIQGIDMIAQAKTGTGKTVAFLLP 136
Query: 437 AIEAVLKATSSSTTQL----VPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVG 492
I +L+ + + I +++ PTRELA QIA EA + + G+ V T VG
Sbjct: 137 VIHRILQDPTLGNLRRNFASAQDIRAVVISPTRELAEQIAVEAQKITRG-SGLKVQTAVG 195
Query: 493 GTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFR 552
GTR + RL+ + C ILV TPGRL+D + + V L+ VLDEAD LLD+GF
Sbjct: 196 GTRKREGLMRLQREGCHILVGTPGRLMDLFSDPTS-GVAAPKLQAFVLDEADRLLDIGFA 254
Query: 553 KDVENIVDCLPRR----RQSLLFSATMPKEL------VLKREHTYIDTVGLGSVETPVKI 602
D+E I P R RQ+L+FSAT+PK + +LK + T+++TVG ETP +
Sbjct: 255 PDIERIQSFFPSRSQVDRQTLMFSATIPKSVKGLARSMLKPDFTFVNTVG---DETPTHL 311
Query: 603 K---QSCLVAPHELHFQILHHLLKEHI---LGTPD----YKVIVFCSTGMVTSL----LY 648
+ ++ + E L + K + PD +K +V+ + S+
Sbjct: 312 RVPQRAVFLRGFENQLPALFEIAKRAVQAHAANPDTAMPFKAVVYYGSTAEVSVARRAFT 371
Query: 649 LLLREM---------KMNVREMYSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPD 699
L R++ ++ EM+SR Q R S+ FR + IL +SDV+ARGMD+P+
Sbjct: 372 ALCRDLESLYTGRAPRIQTIEMHSRLTQAQRTFNSDSFRRATTGILFSSDVTARGMDFPN 431
Query: 700 VTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLAPWE-EYFLDDLKDLPL 751
V+ V+Q+G+P D + YIHRLGRT R K GEG +L E + F + L+ LP+
Sbjct: 432 VSHVIQMGVPNDTDTYIHRLGRTARADKTGEGWILFPDIEFDAFGEKLRSLPI 484
>gi|445499097|ref|ZP_21465952.1| ATP-dependent RNA helicase RhlE [Janthinobacterium sp. HH01]
gi|444789092|gb|ELX10640.1| ATP-dependent RNA helicase RhlE [Janthinobacterium sp. HH01]
Length = 550
Score = 223 bits (569), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 137/377 (36%), Positives = 214/377 (56%), Gaps = 14/377 (3%)
Query: 377 SQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLP 436
SQ RF + G+SP ++ALT GY+ T +Q + L+G+D + A+TGTGK+ F LP
Sbjct: 63 SQVRFADFGLSPHILRALTDQGYVHPTPIQAQAIPVLLQGRDVMGAAQTGTGKTAGFALP 122
Query: 437 AIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRF 496
I+ +L S+ST+ P+ LIL PTRELA Q+ AE + H + + GG
Sbjct: 123 IIQMLLAHASTSTSPARHPVRALILTPTRELAVQV-AENVKAYAQHTPLRSTVVFGGMDM 181
Query: 497 KVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVE 556
K L++ +I++ATPGRLLDH+E K ++ L ++MLV+DEAD +LD+GF D++
Sbjct: 182 KGQTVILKAG-VEIVIATPGRLLDHVEQK---NISLGQVQMLVMDEADRMLDMGFLPDLQ 237
Query: 557 NIVDCLPRRRQSLLFSATMPKELVLKREHTYID---TVGLG-SVETPVKIKQSCLVAPHE 612
I++ LP +RQ+L+FSAT E + K +T++ T+ + S +T K+ Q P
Sbjct: 238 RIINLLPAKRQNLMFSATFSPE-IKKLANTFLTNPVTIEVARSNQTADKVTQVVYKVPEN 296
Query: 613 LHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDR 672
+ HLL++ L +VI+F +T + S L L + M ++ K Q R
Sbjct: 297 QKHALTAHLLRQREL----KQVIIFSNTKIGASRLAKGLEQEGMKAVAIHGDKTQQERMA 352
Query: 673 ISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGV 732
E F+ + ILV +DV+ARG+D D+ V+ +P + E Y+HR+GRTGR G G+ +
Sbjct: 353 ALESFKKGEIDILVATDVAARGLDITDLPCVINYDLPYNAEDYVHRIGRTGRAGASGDAL 412
Query: 733 LLLAPWEEYFLDDLKDL 749
+ + +E L D++ L
Sbjct: 413 SIYSDKDERLLADIEKL 429
>gi|147902341|ref|NP_001084744.1| uncharacterized protein LOC414715 [Xenopus laevis]
gi|46329511|gb|AAH68907.1| MGC83105 protein [Xenopus laevis]
Length = 638
Score = 223 bits (569), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 165/491 (33%), Positives = 264/491 (53%), Gaps = 44/491 (8%)
Query: 357 KNKLNGNGEKKEKREEE----PILSQKRFDECGISPL-------TIKALTAAGYIQMTRV 405
++K + EKKE EE P+ F++ S L T+KA+T G+ MT +
Sbjct: 112 ESKCENHVEKKEDEEENGPTLPMGLTGAFEDTAFSSLADSVNENTLKAITEMGFTHMTEI 171
Query: 406 QEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLVP--PIYVLILCP 463
Q + LEG+D + A+TG+GK++AFL+PAIE + K + +P VLIL P
Sbjct: 172 QHKAIRPLLEGRDVLAAARTGSGKTLAFLIPAIELIYK------LKFMPRNGTGVLILSP 225
Query: 464 TRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIE 523
TRELA Q L+ +H L ++GG+ + ++L ++ I+VATPGRLLDH++
Sbjct: 226 TRELAMQTYGVLKELMAHHVHTFGL-IMGGSNRSAEAQKL-ANGVNIVVATPGRLLDHMQ 283
Query: 524 NKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQSLLFSATMPKE----- 578
N G + L+ LV+DEAD +L++GF ++++ I++ LP+RRQ++LFSAT ++
Sbjct: 284 NTPGFMYK--NLQCLVIDEADRILEVGFEQEMKQIINLLPKRRQTMLFSATQTRKVEDLA 341
Query: 579 -LVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILHHLLKEHILGTPDYKVIVF 637
+ +K+E Y+ T ++Q +V P E F +L LK++ K++VF
Sbjct: 342 RISMKKEPLYVGVDDHKETATVDGLEQGYVVCPSEKRFLLLFTFLKKN----RKKKMMVF 397
Query: 638 CSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDY 697
S+ M Y LL + + V ++ ++ Q R +F ++ IL+ +DV+ARG+D
Sbjct: 398 FSSCMSVKYHYELLNYIDLPVMAIHGKQKQTKRTTTFFQFCNAESGILLCTDVAARGLDI 457
Query: 698 PDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEG--VLLLAPWEEYFLDDLKD--LPLDK 753
P+V +VQ P D ++YIHR+GRT R G +G G +L+L P E FL LK +PL +
Sbjct: 458 PEVDWIVQYDPPDDPKEYIHRVGRTAR-GIDGRGHALLILRPEELGFLRYLKQAKVPLSE 516
Query: 754 LQLPHLN-PEIQLQMDNHMAK---IDNNVKEAAYHAWLGYYNSIREIGRDKTTLVELANK 809
+ +IQ Q++ + K + + +E AY A++ Y+S + L K
Sbjct: 517 FEFSWSKISDIQTQVEKLIEKNYYLHKSAQE-AYKAYIRAYDSHSHKQIFDVNTLNLP-K 574
Query: 810 FAQSIGLQRPP 820
A S G Q PP
Sbjct: 575 VALSFGFQVPP 585
>gi|336375107|gb|EGO03443.1| hypothetical protein SERLA73DRAFT_165133 [Serpula lacrymans var.
lacrymans S7.3]
Length = 775
Score = 223 bits (569), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 158/449 (35%), Positives = 230/449 (51%), Gaps = 49/449 (10%)
Query: 376 LSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLL 435
L+ K F ++P+ + LT + E + E +D +VKAKTGTGK+ AFL+
Sbjct: 76 LTVKPFTMTSMTPVQAEVLTLLPKLAEPYDPENCEVSSREPRDLLVKAKTGTGKTFAFLV 135
Query: 436 PAIEAVLKATSSSTTQLV---------------------PPIYVLILCPTRELASQIAAE 474
PA+EA +KA + + V + +I+ PTRELA+QIA
Sbjct: 136 PAVEARMKAIDAYGKKAVRDAGLVSDKHIEARAQRQFSREHVGAVIISPTRELATQIANS 195
Query: 475 AIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMG 534
A+ L ++H+ V VGG ++ R I+V TPGR+ D +EN+ ++ +
Sbjct: 196 ALKLTQHHN-FEVRLFVGGASKRMQMRDWMKGRRDIVVTTPGRMRDLLENEPEVAKGISR 254
Query: 535 LKMLVLDEADHLLDLGFRKDVENIVDCLPR--RRQSLLFSATMPKEL------VLKREHT 586
KML+LDEAD LLDLGFR D++ I + +P+ RQ+ LFSAT+ + L + H
Sbjct: 255 CKMLILDEADTLLDLGFRDDIDAIAEYMPKTPERQTFLFSATVSPAIQQVARATLDKNHI 314
Query: 587 YIDTVGLGSVETPVKIKQSCLVAP--HELHFQILHHLLKEHILGTPDYKVIVFCSTGMVT 644
+IDTV I Q V P + +L + + + K+++F T +T
Sbjct: 315 FIDTVPENESNVHAHIAQYHTVLPKASDQLPHVLRLVAHDQLTNPGKSKIMMFFPTTKMT 374
Query: 645 SLLYLLLREM---------KMNVREMYSRKPQLYRDRISEEFRASKR--LILVTSDVSAR 693
L RE+ + V E++S+K R S+ FR K IL++SDVSAR
Sbjct: 375 QLFATYFRELSRKVLPAGRQTRVYEIHSKKSMESRTTTSDMFRNDKTGASILISSDVSAR 434
Query: 694 GMDYPDVTSVVQVGIPPDREQYIHRLGRTGRE-GKEGEGVLLLAPWEEYFLD-DLKDLPL 751
G+DYP VT V+QVGIP +QYIHR+GRTGR+ G G G L+L PWE FL L ++PL
Sbjct: 435 GVDYPGVTRVIQVGIPAGTDQYIHRIGRTGRKGGTNGRGDLVLLPWEIGFLSWQLSEVPL 494
Query: 752 DKLQLPHLNPEIQLQMDNHMAKIDNNVKE 780
P E++ Q+ + AK D N E
Sbjct: 495 K----PVTTNELKSQIKDLCAKYDANPSE 519
>gi|126179703|ref|YP_001047668.1| DEAD/DEAH box helicase domain-containing protein [Methanoculleus
marisnigri JR1]
gi|125862497|gb|ABN57686.1| DEAD/DEAH box helicase domain protein [Methanoculleus marisnigri
JR1]
Length = 527
Score = 223 bits (569), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 146/367 (39%), Positives = 208/367 (56%), Gaps = 24/367 (6%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F E ISP T++A+ G+ + T +Q +T+ A L+G+D +A+TGTGK+ AF +PAIE
Sbjct: 7 FQELNISPKTLRAIEDMGFEEPTPIQVSTIPAILDGRDVTGQAQTGTGKTAAFGVPAIER 66
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
V T S TQ VL+L PTRELA Q A E L K+H GI +L + GG
Sbjct: 67 V--DTGSRETQ------VLVLSPTRELAIQTAEEFSRLAKHHQGINILPIYGGQPIDRQF 118
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
R L+ QI+V TPGR+LDH++ + + +K++VLDEAD +LD+GFR+D+E I+D
Sbjct: 119 RALQRG-VQIVVGTPGRVLDHLDRGT---LSFGAVKVVVLDEADQMLDMGFREDIEKILD 174
Query: 561 CLPRRRQSLLFSATMPKELV-----LKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHF 615
PR RQ++LFSAT+PK ++ ++ +I +V V P +I+Q L
Sbjct: 175 DTPRDRQTILFSATLPKPILEISKKFQKNPEFI-SVARKEVTVP-QIEQLYLEVRSRDRL 232
Query: 616 QILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISE 675
+IL LL + PD +I F +T L L+ ++ Q RDR+
Sbjct: 233 EILTRLLDMY---DPDLTLI-FSNTKRGVDDLTTHLQARGYFAEGLHGDMKQTLRDRVMA 288
Query: 676 EFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLL 735
+FRA ILV +DV+ARG+D DV V+ +P D E YIHR+GRT R G+ G V +
Sbjct: 289 KFRAGSIDILVATDVAARGIDVEDVDLVINYDVPQDIEYYIHRIGRTARAGRTGRAVTFV 348
Query: 736 APWEEYF 742
P +EYF
Sbjct: 349 GP-KEYF 354
>gi|330919867|ref|XP_003298788.1| hypothetical protein PTT_09605 [Pyrenophora teres f. teres 0-1]
gi|311327825|gb|EFQ93095.1| hypothetical protein PTT_09605 [Pyrenophora teres f. teres 0-1]
Length = 703
Score = 223 bits (568), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 170/474 (35%), Positives = 253/474 (53%), Gaps = 61/474 (12%)
Query: 402 MTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQL-------VP 454
MT VQ T++ L G D + +AKTGTGK++ FL+P I+ +++A +
Sbjct: 105 MTDVQTRTINEALSGVDVIAQAKTGTGKTLGFLIPVIQRIIQADPGLADKPRGYKRAKAD 164
Query: 455 PIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILVAT 514
I +I+ PTRELA QIA EA + GI V VGGTR + + + + C +++AT
Sbjct: 165 DIRAIIMSPTRELAEQIAVEARKVTSG-TGIIVQCAVGGTRKREMLVKTQREGCHLMIAT 223
Query: 515 PGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPR----RRQSLL 570
PGRL D + + ++ L VLDEAD LLD GF ++++ I LP RQ+L+
Sbjct: 224 PGRLFDILSDPYS-GIKAPRLNAFVLDEADRLLDEGFTREIDEIKKILPDPAEVERQNLM 282
Query: 571 FSATMPKELV------LKREHTYIDTVGLGSVETPVKIKQS-CLVAPHELHFQILHHLL- 622
FSAT+P+ +V ++ + V T +I Q ++A E L+ L+
Sbjct: 283 FSATIPRNVVDLVRRTMRPGFHFAKCVDENEEPTHQRIPQKMVMLAGFENIIPTLYELMC 342
Query: 623 ----KEHILGTPDYKVIV-FCSTGMVT---SLLYLL----LREMK-----MNVREMYSRK 665
+ G+ +K IV F ST VT S+ Y L LR + E++++
Sbjct: 343 KEQAEAQAGGSRPFKAIVYFNSTAEVTLAASVFYKLNGGGLRRSNSPLAGLRNYEIHAKL 402
Query: 666 PQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGRE 725
Q R R +++FR +K +L +SDV+ARGMD+P+VT V+QVG+P DR+ YIHRLGRTGR
Sbjct: 403 SQGQRTRAADDFRIAKSGVLFSSDVTARGMDFPEVTHVIQVGLPRDRDSYIHRLGRTGRA 462
Query: 726 GKEGEGVLLLAPWEEYFL-DDLKDLPL-DKLQ--------------LPH-LNPEIQLQMD 768
GKEGEG L + P+E+ + L+DLPL D Q +P +N IQ ++
Sbjct: 463 GKEGEGWLFITPFEKNEIRRRLRDLPLSDSTQELNIAALDMSQASEIPEDMNAMIQECIE 522
Query: 769 NHMAKIDNNVKEAAYHAWLGYYNSIREIGRDKTTLVELANKFAQ-SIGLQRPPP 821
H K+ + +AA+ G + S + G DK LVE AN+ A+ G++ PPP
Sbjct: 523 AH-KKVYPDQLDAAFR---GLFGSFQWFG-DKHALVEGANRLAEFGWGMETPPP 571
>gi|400601900|gb|EJP69525.1| ATP-dependent RNA helicase mss116 [Beauveria bassiana ARSEF 2860]
Length = 669
Score = 223 bits (568), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 168/492 (34%), Positives = 259/492 (52%), Gaps = 50/492 (10%)
Query: 383 ECGISPLTIKALTA-AGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAV 441
E G++ ++A+T GY M+ VQ T++ L+G D V +AKTGTGK+IAFLLP ++ +
Sbjct: 89 EEGVNETLLRAITKDLGYRTMSPVQAKTIAPALKGTDIVAQAKTGTGKTIAFLLPLLQRM 148
Query: 442 LK-----ATSSSTTQLVPP-IYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTR 495
+ AT S+ + P I +++ PTRELA QIA EA L++ H G+ V + VGGT+
Sbjct: 149 INEDPTLATRSAKYEARPDDIRGIVMSPTRELAEQIAEEARRLVR-HTGLVVQSAVGGTQ 207
Query: 496 FKVDQRRLESDPCQILVATPGRLLDHIEN-KSGLSVRLMGLKMLVLDEADHLLDLGFRKD 554
+ + C +LVATPGRL D + + +SG ++ L +VLDEAD +LD+GF ++
Sbjct: 208 KNRMLYKTRREGCHLLVATPGRLHDLLSDPESG--IQAPNLAAMVLDEADRMLDVGFERE 265
Query: 555 VENIVDCLPRR--RQSLLFSATMP-------KELVLKREHTYIDTVGLGSVETPVKIKQS 605
+ +I+ LPR RQ++L SAT+P + +V + ++ T+ T + Q+
Sbjct: 266 LNDIIKLLPRDKVRQTMLVSATIPDSVIRLTRNMVRADDFQFVQTIAESESLTHEHVPQN 325
Query: 606 CLVAPH-----ELHFQILHHLLKEHILGTPD---YKVIVFCSTGMVTSL---LYLLLREM 654
+ H F+++ L E PD +K IV+ +T +T L +
Sbjct: 326 VVTVSHINNILPALFELIGKGLAES-KENPDKKPFKAIVYLNTTAMTQLAGEMGFAKNRD 384
Query: 655 KMNVR--EMYSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDR 712
+ VR ++S Q R R +E FR S+ +L +SDV+ARGMD+PDVT V+QV P DR
Sbjct: 385 RTFVRNFSIHSGLTQQARTRAAENFRRSQSAVLFSSDVTARGMDFPDVTHVIQVDCPRDR 444
Query: 713 EQYIHRLGRTGREGKEGEGVLLLA----PWEEYFLDDLKDLPLDKLQLPHLN-------P 761
E YIHRLGRT R+ K+GEG LLL P L L P L+ + P
Sbjct: 445 ETYIHRLGRTARQKKDGEGWLLLPATSRPRARSLLGGLPLKPSTALETASFDINSDTNPP 504
Query: 762 EIQLQMDNHMAKIDNNVKEAAYHAWLGYYNSIREIGRDKTTLVELANKFA-QSIGLQRPP 820
+ + +++ + + E AY + + S RD +V+ N++A G Q PP
Sbjct: 505 DAMAETKKLYSQVPSRLLEEAYRVTI--FGSTERHARDD--VVDQMNEWATHGWGWQSPP 560
Query: 821 PLFRKTALKMGL 832
+ + A + G
Sbjct: 561 TVSKAKADRNGF 572
>gi|440292099|gb|ELP85341.1| ATP-dependent RNA helicase HAS1, putative [Entamoeba invadens IP1]
Length = 566
Score = 223 bits (567), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 149/460 (32%), Positives = 256/460 (55%), Gaps = 31/460 (6%)
Query: 375 ILSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFL 434
L++++F +S AL AG+ MT +QE T L G+D + KA+TG+GK++A+L
Sbjct: 102 FLTERKFSALKLSDEVQDALDEAGFTFMTTIQERTAPLLLTGRDVLAKARTGSGKTLAYL 161
Query: 435 LPAIEAV--LKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVG 492
+P ++ + +K TS + T +I+ PTRELA QI L++N + L L+G
Sbjct: 162 VPVLDLLNKIKFTSRNGTG------AIIISPTRELALQIYEVLEKLMQNSERSKAL-LIG 214
Query: 493 GTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFR 552
G K D+ LE+ C ++VATPGRLLDH+ N + LK LV+DEAD +L+ GF
Sbjct: 215 GNPKKKDEEVLENGAC-VVVATPGRLLDHLSNTRCFLFK--NLKCLVIDEADRILEAGFE 271
Query: 553 KDVENIVDCLPRRRQSLLFSATMPKEL-----VLKREHTYIDTVGLGSVETPVKIKQSCL 607
++ I++ LP+ RQ++LFSAT ++ + ++ +++ + T K++Q +
Sbjct: 272 DEMRQILNRLPKNRQTMLFSATQTDKVEDMANLSLKDPVFVNVEESSTTATSSKLQQGYV 331
Query: 608 VAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQ 667
+ + F++L+ L+++ K+IVF S+ LL + V ++ + Q
Sbjct: 332 LVESKDRFRLLYTFLRKY----KGKKMIVFMSSCNAVKFYSNLLNYIDTPVLSLHGQLKQ 387
Query: 668 LYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGK 727
R ++ E+F +K IL+T+DV+ARG+D P+V ++Q+ +P +YIHR+GRT R
Sbjct: 388 DKRTKVFEKFCKTKNCILLTTDVAARGLDIPEVDWIIQMDLPDGPTEYIHRVGRTARADT 447
Query: 728 EGEGVLLLAPWEEYFLDDLKD--LPLDKLQLPHLN-PEIQLQMDNHMAK---IDNNVKEA 781
EG+ V+ L P E L +K+ +PL + ++P +Q +++ +AK + + KE
Sbjct: 448 EGKAVMFLQPTEIAMLKYMKEKQIPLTQYEVPEKKIANVQQELEKLVAKNVFLHQDAKE- 506
Query: 782 AYHAWLGYYNSIREIGRDKTTLVEL-ANKFAQSIGLQRPP 820
AY ++L YNS ++ +D L ++ A+S G+ PP
Sbjct: 507 AYKSYLMAYNSHKQ--KDVFNLNQIDVEGLAKSFGMPNPP 544
>gi|448122884|ref|XP_004204553.1| Piso0_000404 [Millerozyma farinosa CBS 7064]
gi|448125154|ref|XP_004205111.1| Piso0_000404 [Millerozyma farinosa CBS 7064]
gi|358249744|emb|CCE72810.1| Piso0_000404 [Millerozyma farinosa CBS 7064]
gi|358350092|emb|CCE73371.1| Piso0_000404 [Millerozyma farinosa CBS 7064]
Length = 777
Score = 223 bits (567), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 154/494 (31%), Positives = 254/494 (51%), Gaps = 46/494 (9%)
Query: 346 EQVELIRKEISKNKLNGNGEKKEKREEEPILSQKRFDECGISPLTIKALTAAGYIQMTRV 405
E+++ ++K + + LN + + +SQ F + I+ T+K L +G++ +T +
Sbjct: 40 ERIQELQKRVEEYDLNADEQ----------ISQ--FSDLPITDETLKGLKDSGFVNLTGI 87
Query: 406 QEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLVPPIYVLILCPTR 465
Q+ + A L+G D + AKTG+GK++AFL+P IE++++ S LV LI+ PTR
Sbjct: 88 QKKAIPAALKGSDVMATAKTGSGKTLAFLVPTIESLIRNEVSEYDGLV----ALIVSPTR 143
Query: 466 ELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENK 525
EL+ QI E + + ++ + GG K ++ R+ ILV TPGRL H
Sbjct: 144 ELSIQIF-EVLTSIGKYNSFSAGLVTGGKDVKFEKERISR--MNILVGTPGRLSQHFNES 200
Query: 526 SGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQSLLFSATMPKELVLKREH 585
GL LK+LVLDEAD LD+GF+K V+NI+ LP RQ+LL+SAT + +
Sbjct: 201 VGLETS--NLKVLVLDEADRCLDMGFKKQVDNIIGHLPPTRQTLLYSATFSQSVRDLARL 258
Query: 586 TYIDTVGLGSV------ETPVKIKQSCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCS 639
+ D + +G ETP + Q + P +L +K H+ K++VF S
Sbjct: 259 SLADPMKIGVSSDDIISETPESLDQYYAIIPLHEKLDMLWSFIKSHLKS----KILVFFS 314
Query: 640 TGMVTSLLYLLLREMK--MNVREMYSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDY 697
+ Y R ++ + + ++Y R Q R + +F ++ L +D+ ARG+D+
Sbjct: 315 SSKQVQFTYETFRTLQPGIPLMKLYGRHKQTSRLETTYKFSKAQHACLFATDIVARGLDF 374
Query: 698 PDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLAPWEEYFLDDLKDLPLDKLQLP 757
P + V+QV P D Y+HR+GR R G++G+ +L+L P EE + LK L K+ +
Sbjct: 375 PAIDWVIQVDCPEDAATYVHRVGRAARFGRQGKSLLMLLPSEEEGM--LKRLDSSKIGIK 432
Query: 758 HLN------PEIQLQMDNHMAKIDNNVKEAAYHAWLGYYNSIREIGRDKTTLV--EL-AN 808
+N I+ Q+ + K + +K A++ Y+ S+ I +DK EL A
Sbjct: 433 QMNIKEKSKKTIRPQLQSLCFK-EPQIKNLGQRAFISYFKSVH-IQKDKEIFKVNELSAE 490
Query: 809 KFAQSIGLQRPPPL 822
K+A S+GL P +
Sbjct: 491 KYAHSLGLPGAPNI 504
>gi|340960269|gb|EGS21450.1| ATP-dependent RNA helicase, mitochondrial-like protein [Chaetomium
thermophilum var. thermophilum DSM 1495]
Length = 632
Score = 222 bits (566), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 174/519 (33%), Positives = 271/519 (52%), Gaps = 51/519 (9%)
Query: 367 KEKREEEPILSQKRFDEC---GISPLTIKALT-AAGYIQMTRVQEATLSACLEGKDAVVK 422
+E E P L RF++ G++ I+++T Y MT VQ T++ L GKD V +
Sbjct: 63 RESNPEPPTLI-TRFEDLHTLGVNERLIQSITKGMRYETMTEVQSMTINPALRGKDVVAQ 121
Query: 423 AKTGTGKSIAFLLPAIEAVLKATS-----SSTTQLVPPIYVLILCPTRELASQIAAEAIA 477
AKTGTGK++AFL+P I+ +++A S I +++ PTRELA QI EA
Sbjct: 122 AKTGTGKTLAFLVPVIQRIIEAQPELERPSRKRATADDIRAIVISPTRELAEQIGEEARK 181
Query: 478 LLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIEN-KSGLSVRLMGLK 536
L +N G+ V T VGGT+ R+ ++ C +L+ATPGRL D + + SG++ L
Sbjct: 182 LARN-TGVRVQTAVGGTQKNAMLRKTRAEGCHLLIATPGRLNDLLSDPTSGIAA--PRLA 238
Query: 537 MLVLDEADHLLDLGFRKDVENIVDCLPRR----RQSLLFSATMPKELVLKREHTYIDTVG 592
LVLDEAD +L++GF+ ++E+IV LP R RQ+LL+SAT+PK +V TYI+
Sbjct: 239 ALVLDEADRMLEVGFKAELESIVSLLPDRNTVPRQTLLYSATLPKNVV-NIARTYINPAN 297
Query: 593 LGSVET------PVKIKQSCLVAP----HELHFQILHHLLKEHILGTPD-----YKVIVF 637
V+T P + + P L +L + +E D K IVF
Sbjct: 298 FEFVQTVRPDDTPTHERVPQFIVPCRGFENLPATLLELVRRELKASYEDKTKMPLKTIVF 357
Query: 638 CSTGMVTSLLYLLLREMKMN------VREMYSRKPQLYRDRISEEFRASKRLILVTSDVS 691
T + R + + +++S+ Q R R S+ F+ ++ IL +SDV+
Sbjct: 358 LPTTASVVCYASMFRRIAYQDKDLPPIYDIHSKLSQFERSRNSDNFKRAQSAILFSSDVT 417
Query: 692 ARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLAPWE-EYFLDDLKDLP 750
ARGMD+P+V+ V+QV +P +R+QYIHR+GRTGR GKEG+ LL++ E D L LP
Sbjct: 418 ARGMDFPNVSHVIQVHLPSNRDQYIHRIGRTGRAGKEGQAWLLVSDIEIPAARDMLPGLP 477
Query: 751 LDKL-QLPHLNPEIQLQMDNHMAK----IDNNVKEAAYHAWLGYYNSIR--EIG-RDKTT 802
+ + +L +++ ++ + K I N ++ Y Y S +G D+
Sbjct: 478 IKRFTELSGAVVDVKKAEESELPKEFVDITNAAQKLPYEIISETYRSFLGGALGDTDRQD 537
Query: 803 LVELANKFAQ-SIGLQRPPPLFRKTALKMGLKDIPGIRL 840
+V N A+ + GL+ PP + + + + I G+RL
Sbjct: 538 VVNEINSMAKHTFGLEEPPAISPRLLANLP-RGIKGLRL 575
>gi|327294243|ref|XP_003231817.1| hypothetical protein TERG_07436 [Trichophyton rubrum CBS 118892]
gi|326465762|gb|EGD91215.1| hypothetical protein TERG_07436 [Trichophyton rubrum CBS 118892]
Length = 643
Score = 222 bits (566), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 160/473 (33%), Positives = 241/473 (50%), Gaps = 51/473 (10%)
Query: 319 SASLGKYDMKITKRVPLKSLEDEHDFEEQVELIRKEISKNKLNGNGEKKEKREEEPILSQ 378
+++L KY ++ R+P L + + N ++ E E I
Sbjct: 23 TSTLAKYSIR---RLPTAPLLTSRALHASPQF---RVPAGTANAGVAVEDAGEAELITEF 76
Query: 379 KRFDECGI-SPLTIKALT-AAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLP 436
E G+ I A+T G MT VQ T++ ++G D + +AKTGTGK++AFLLP
Sbjct: 77 SELGEKGVVDQRLINAITKGMGLKTMTDVQAQTINESIQGIDMIAQAKTGTGKTVAFLLP 136
Query: 437 AIEAVLKATSSSTTQL----VPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVG 492
I +L+ + + I +++ PTRELA QIA EA + + G+ V T VG
Sbjct: 137 VIHRILQDPTLGNLRRNFASAQDIRAVVISPTRELAEQIAVEAQKITRG-SGLKVQTAVG 195
Query: 493 GTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFR 552
GTR + RL+ + C ILV TPGRL+D + + V L+ VLDEAD LLD+GF
Sbjct: 196 GTRKREGLMRLQREGCHILVGTPGRLMDLFSDPTS-GVAAPKLQAFVLDEADRLLDIGFA 254
Query: 553 KDVENIVDCLPRR----RQSLLFSATMPKEL------VLKREHTYIDTVGLGSVETPVKI 602
D+E I P R RQ+L+FSAT+PK + +LK + T+++TVG ETP +
Sbjct: 255 PDIERIQSFFPSRSQVDRQTLMFSATIPKSVKGLARSMLKPDFTFVNTVG---DETPTHL 311
Query: 603 K---QSCLVAPHELHFQILHHLLKEHI---LGTPD----YKVIVFCSTGMVTSL----LY 648
+ ++ + E L + K + PD +K +V+ + S+
Sbjct: 312 RVPQRAVFLRGFENQLPALFEIAKRAVQAHAANPDTAMPFKAVVYYGSTAEVSVARRAFT 371
Query: 649 LLLREM---------KMNVREMYSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPD 699
L R++ ++ EM+SR Q R S+ FR + IL +SDV+ARGMD+P+
Sbjct: 372 ALCRDLESLYTSRAPRIQTIEMHSRLTQAQRTFNSDSFRRATTGILFSSDVTARGMDFPN 431
Query: 700 VTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLAPWE-EYFLDDLKDLPL 751
V+ V+Q+G+P D + YIHRLGRT R K GEG +L E + F + L+ LP+
Sbjct: 432 VSHVIQMGVPNDTDTYIHRLGRTARADKTGEGWILFPDIEFDAFGEKLRSLPI 484
>gi|444723572|gb|ELW64223.1| putative ATP-dependent RNA helicase DDX10 [Tupaia chinensis]
Length = 663
Score = 222 bits (566), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 161/476 (33%), Positives = 253/476 (53%), Gaps = 47/476 (9%)
Query: 380 RFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIE 439
RF + +S T+K L A Y +T +Q+ T+ L+GKD + AKTG+GK++AFL+P +E
Sbjct: 72 RFSDFPLSKKTLKGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLE 131
Query: 440 AVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVD 499
A+ + +ST L VLI+ PTRELA Q + KNHD L ++GG K +
Sbjct: 132 ALYRLQWTSTDGL----GVLIISPTRELAYQTFEVLRKIGKNHDFSAGL-IIGGKDLKHE 186
Query: 500 QRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIV 559
R+ + ILV T GRLL H++ + L+MLVLDEAD +LD+GF + I+
Sbjct: 187 AERINN--INILVCTLGRLLQHMD--ETVCFHATNLQMLVLDEADRILDMGFADTMNAII 242
Query: 560 DCLPRRRQSLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHEL 613
+ LP++RQ+LLFSAT K L LK Y+ TP ++Q+ +V +
Sbjct: 243 ENLPKKRQTLLFSATQTKSVKDLARLSLKNPE-YVWVHEKAKYSTPATLEQNYIVCELQQ 301
Query: 614 HFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK--MNVREMYSRKPQLYRD 671
+L+ LK H+ K IVF S+ LY + ++ +++ ++ R+ Q+ R
Sbjct: 302 KISVLYSFLKSHL----KKKSIVFFSSCKEVQYLYRVFCRLRPGISILALHGRQQQMRRM 357
Query: 672 RISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEG 731
+ EF + +L +D++ARG+D+P V V+Q P D YIHR GRT R ++GE
Sbjct: 358 EVYNEFVRKRAAVLFATDIAARGLDFPAVNWVLQFDCPEDANTYIHRAGRTARYKEDGEA 417
Query: 732 VLLLAPWEEY-FLDDL--KDLPLDKLQLPHLNPE----IQLQMDNHMAKIDNNVKEAAYH 784
+L+L P EE + L K +P+ +++ +NPE +Q ++++ +A+ D ++KE A
Sbjct: 418 LLILLPSEEKGMVQQLLQKKVPVKEIK---INPEKLIDVQKKLESFLAQ-DQDLKERAQR 473
Query: 785 AWLGYYNSIREIGRDKTTLVELANKFAQSIGLQRPPPLFRKTALKMGLKDIPGIRL 840
++ Y S+ + +DK NK P P + AL +GL P IR
Sbjct: 474 CFVSYIRSVY-LMKDKEIFD--VNKL--------PIPEY---ALSLGLAVAPRIRF 515
>gi|345492365|ref|XP_001600475.2| PREDICTED: probable ATP-dependent RNA helicase DDX10-like [Nasonia
vitripennis]
Length = 825
Score = 222 bits (566), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 151/455 (33%), Positives = 248/455 (54%), Gaps = 28/455 (6%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
++F + +S T+K L + YI +T +Q ++ L+G D + AKTG+GK++AFL+P +
Sbjct: 41 QKFTDLPLSMQTLKGLKDSEYIDLTDIQRQSIGLALKGNDILGAAKTGSGKTLAFLIPVM 100
Query: 439 EAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
E + T+L + LI+ PTRELA QI + + HD I ++GG
Sbjct: 101 EILY---CKQWTRL-DGLGALIITPTRELAYQIYETLRKVGRYHD-ISAGLIIGGKDLHF 155
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
+++RL D C I++ TPGRLL H++ + +K+LVLDEAD LD+GF K + +I
Sbjct: 156 EKKRL--DQCNIIICTPGRLLQHMDENPLFDC--VNMKILVLDEADRCLDMGFEKTMNSI 211
Query: 559 VDCLPRRRQSLLFSATMPKEL-----VLKREHTYIDTVGLGSVETPVKIKQSCLVAPHEL 613
++ LP RQ+LLFSAT K + + ++ YI + TP ++QS +V E
Sbjct: 212 IENLPLERQTLLFSATQTKTVKDLARLSLKDPLYISVHENAAHTTPEGLQQSYIVCELEE 271
Query: 614 HFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK--MNVREMYSRKPQLYRD 671
+L ++ H+ K+IVF S+ ++ M+ +++ +Y QL R
Sbjct: 272 KLAMLWSFIRNHL----KQKIIVFFSSCKQVKYIFEAFCRMRPGVSLLSLYGTLHQLKRM 327
Query: 672 RISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEG 731
I E F + +L +D++ARG+D+P V VVQ+ P D YIHR GRT R GE
Sbjct: 328 SIYESFCKKQHAVLFATDIAARGLDFPAVNWVVQMDCPEDVNAYIHRAGRTARFQSGGES 387
Query: 732 VLLLAPWEEYFLDDLKD--LPLDKLQL-PHLNPEIQLQMDNHMAKIDNNVKEAAYHAWLG 788
+L+L P EE + LK+ +P++ +++ P+ Q +++ +A+ D +KE+A A++
Sbjct: 388 LLVLLPSEEKIVHQLKERKIPINMIKINPNKLQSPQRKLEALLAR-DVALKESAQRAFVA 446
Query: 789 YYNSIREIGRDKTTLVELA---NKFAQSIGLQRPP 820
Y S+ + +DK+ A + FA+S+GL PP
Sbjct: 447 YVKSVF-LMKDKSIFNVHALNTDAFARSLGLAIPP 480
>gi|429862970|gb|ELA37555.1| dead box RNA helicase [Colletotrichum gloeosporioides Nara gc5]
Length = 653
Score = 222 bits (566), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 169/486 (34%), Positives = 252/486 (51%), Gaps = 56/486 (11%)
Query: 399 YIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLV----- 453
Y MT VQ T+ L+G D V +AKTGTGK++AFL+P ++ ++ A S T+
Sbjct: 101 YETMTDVQSKTIEPALKGMDMVAQAKTGTGKTLAFLVPILQRMISADLSLATRRARFSAD 160
Query: 454 -PPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILV 512
I +I+ PTRELA QIA EA L + G+ V VGGT+ + C +LV
Sbjct: 161 ASDIRGIIISPTRELAEQIAVEAEKLCQG-TGLVVQRAVGGTQKRQMLMETRRRGCHLLV 219
Query: 513 ATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLP----RRRQS 568
TPGRL D + ++S +R L +VLDEAD +LD+GF +++++IV LP +RQ+
Sbjct: 220 GTPGRLNDLLSDRSS-GIRAPNLAAIVLDEADRMLDVGFERELQDIVSQLPDAKETQRQT 278
Query: 569 LLFSATMPKELV-LKREHT------YIDTVGLGSVETPVKIKQSCL-------VAPHELH 614
LLFSAT+P ++ L R+ +I TV V T K+KQ + V P
Sbjct: 279 LLFSATIPSNVINLARQWVRPDNFDFIQTVSKDDVLTHEKVKQHVVNCRGWGNVLPS--L 336
Query: 615 FQILHHLLKEHILGTPD---YKVIVFCSTGMVTSLLYLLLREMKMNVREMY--------- 662
++++H L E PD +K +VF T L + R MK ++R Y
Sbjct: 337 YELMHTEL-EKRAKNPDLLPFKALVFLPTTGFVELASEIDRSMK-HMRSQYDRVWSWRIH 394
Query: 663 SRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRT 722
S+ Q R + +++FRA+ IL +SDV+ARG+D+P+VT V+QVG P DREQYIHRLGRT
Sbjct: 395 SKLTQPARTKAADQFRAATSGILFSSDVTARGLDFPNVTHVIQVGAPSDREQYIHRLGRT 454
Query: 723 GREGKEGEGVLLLAPWE-EYFLDDLKDLPLDKLQLP---------HLNPEIQLQMDNHMA 772
GR KEGEG L+L + +L LP++ L + EI + +
Sbjct: 455 GRAKKEGEGWLILPESDIRKARTELAGLPIEPSALESAKVDFTRGETSSEITKAVTKVAS 514
Query: 773 KIDNNVKEAAYHAWLGYYNSIREIGRDKTTLVELANKFAQSIGLQRPPPLFRKTALKMGL 832
++ + E AY + G ++S + EL + + P + R+ K G+
Sbjct: 515 EVPEEILEKAYLSLWGQFDSRTAQAKAD----ELKEWWIDGMQKDNTPFMSRQALEKRGI 570
Query: 833 KDIPGI 838
++I G+
Sbjct: 571 RNIRGM 576
>gi|355752613|gb|EHH56733.1| hypothetical protein EGM_06198 [Macaca fascicularis]
Length = 872
Score = 222 bits (566), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 155/474 (32%), Positives = 254/474 (53%), Gaps = 44/474 (9%)
Query: 380 RFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIE 439
RF + +S T+K L A Y +T +Q+ T L+GKD + AKTG+GK++AFL+P +E
Sbjct: 70 RFSDFPLSKKTLKGLQEAQYRLVTEIQKQTTGLALQGKDVLGAAKTGSGKTLAFLVPVLE 129
Query: 440 AVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVD 499
A+ + +ST L VLI+ PTRELA Q + KNHD L ++GG K +
Sbjct: 130 ALYRLQWTSTDGL----GVLIISPTRELAYQTFEVLRKVGKNHDFSAGL-IIGGKDLKHE 184
Query: 500 QRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIV 559
R+ + ILV TPGRLL H++ +S L+MLVLDEAD +LD+GF + I+
Sbjct: 185 AERINN--INILVRTPGRLLQHMDE--TVSFHATDLQMLVLDEADRILDMGFADTMNAII 240
Query: 560 DCLPRRRQSLLFSATMPKEL-----VLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELH 614
+ LP++RQ+LLFSAT K + + ++ Y+ TP ++Q+ +V +
Sbjct: 241 ENLPKKRQTLLFSATQTKSVKDLARLSLKDPEYVWVHEKAKYSTPATLEQNYIVCELQQK 300
Query: 615 FQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREM--KMNVREMYSRKPQLYRDR 672
+L+ L+ H+ K IVF S+ LY + ++ +++ ++ + Q+ +
Sbjct: 301 ISVLYSFLRSHL----KKKSIVFFSSCKEVQYLYRVFCQLCPGISILALHGWQQQMRKME 356
Query: 673 ISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGV 732
+ EF + +L +D++ARG+D+P V V+Q P D YIHR GRT R ++GE +
Sbjct: 357 VYNEFVRKRAAVLFATDIAARGLDFPAVNWVLQFDCPEDANTYIHRAGRTARYKEDGEAL 416
Query: 733 LLLAPWEEYFLDDL--KDLPLDKLQLPHLNPE----IQLQMDNHMAKIDNNVKEAAYHAW 786
L+L P E+ + L K +P+ +++ +NPE +Q ++++ +A+ D ++KE +
Sbjct: 417 LILLPSEKAMVQQLLQKKVPVKEIK---INPEKLIDVQKKLESFLAQ-DQDLKERETGCF 472
Query: 787 LGYYNSIREIGRDKTTLVELANKFAQSIGLQRPPPLFRKTALKMGLKDIPGIRL 840
+ Y S+ + +DK F S + P P + AL +GL P IR
Sbjct: 473 VSYIRSVY-LMKDKEV-------FDVS---KLPIPEY---ALSLGLAVAPRIRF 512
>gi|393235874|gb|EJD43426.1| DEAD-domain-containing protein [Auricularia delicata TFB-10046 SS5]
Length = 751
Score = 222 bits (566), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 147/392 (37%), Positives = 207/392 (52%), Gaps = 46/392 (11%)
Query: 417 KDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLV---------------------PP 455
KD +++AKTGTGK++AFL+PAIE ++ ++ Q
Sbjct: 129 KDLLIQAKTGTGKTLAFLVPAIEQRIRTLNAIGRQAAIDAGKPGDHGIAKLAMRSYARKY 188
Query: 456 IYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILVATP 515
+ +I+ PTRELA+QIA EA+ + NH V VGG + R E I+VAT
Sbjct: 189 VGTVIVSPTRELATQIANEAMRVSANHPEFEVRLFVGGVSKGLQMRGWERGRRDIVVATT 248
Query: 516 GRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLP--RRRQSLLFSA 573
GRLLD + N G+ ++LVLDEAD LLD+GFR D+E + + LP +RQ+ L SA
Sbjct: 249 GRLLDLLTNMGGMKEGFKNTQLLVLDEADTLLDMGFRDDIEMLRNHLPPAPQRQTFLCSA 308
Query: 574 TMPKEL------VLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILHHLLK---- 623
T+ +E+ +L+ +HT+I + Q V P H + HL++
Sbjct: 309 TLSREITQVARTLLRPDHTFIRVSAGDDSPVHAHVPQYHTVLPDATH--QIQHLIRLIAH 366
Query: 624 EHILGTPDYKVIVFCSTGMVTSLLYLLLREM--------KMNVREMYSRKPQLYRDRISE 675
+ I KVI+F ST T L +LRE+ + N+ E++S+K Q R S
Sbjct: 367 DQIANAGRSKVIIFVSTTKKTQLFATILRELAKTNLPASRSNIYELHSKKQQGARTNTSN 426
Query: 676 EFRA--SKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVL 733
FR S +LVTSDVSARG+DYP VT V+Q+G+ E YIHR+GRTGR G +G G L
Sbjct: 427 MFRYDRSGASVLVTSDVSARGVDYPGVTRVIQLGVASSSEVYIHRVGRTGRAGTKGRGDL 486
Query: 734 LLAPWEEYFLDD-LKDLPLDKLQLPHLNPEIQ 764
+L PWE F L +PL L + L E++
Sbjct: 487 ILLPWEAGFASHTLSKVPLKSLDVHELKTELE 518
>gi|330844673|ref|XP_003294242.1| hypothetical protein DICPUDRAFT_159210 [Dictyostelium purpureum]
gi|325075337|gb|EGC29238.1| hypothetical protein DICPUDRAFT_159210 [Dictyostelium purpureum]
Length = 599
Score = 222 bits (565), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 156/455 (34%), Positives = 249/455 (54%), Gaps = 31/455 (6%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F I T K++ + +MT +Q ++ LEGKD + A+TG+GK++AFL+PAIE
Sbjct: 121 FANLPIHDNTKKSIEEMTFKKMTPIQAKSILPLLEGKDLLGAARTGSGKTLAFLIPAIEI 180
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
++K+ V+I+ PTRELA QI A LLK H + ++GG K ++
Sbjct: 181 LVKSGFKPRNG----TGVIIISPTRELALQIYGVAKELLKYHTQTHGI-IIGGAAKKPEE 235
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
RLE +LVATPGRLLDH++N G + LK LV+DEAD +L++GF +++ IV
Sbjct: 236 ERLEKG-VNLLVATPGRLLDHLQNTKGFITK--NLKCLVIDEADRILEVGFEEEMHKIVK 292
Query: 561 CLPRRRQSLLFSATMPKEL------VLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELH 614
LP+ RQ++LFSAT +++ L Y+ + T ++Q +V P E
Sbjct: 293 LLPKNRQTMLFSATQTRKVEDIAKVSLNNSPVYVGVDDEREISTVEGLEQGYVVCPSERR 352
Query: 615 FQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRIS 674
F +L+ LK ++ + KVIVF S+ LL + + V E++ R+ Q R
Sbjct: 353 FLLLYTFLKRNL----NKKVIVFLSSCNAVKYTAELLNYIDIPVLELHGRQKQQKRTNTF 408
Query: 675 EEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGRE-GKEGEGVL 733
EF +++ IL+ +DV+ARG+D P V ++Q P D ++YIHR+GRT R GK+G +L
Sbjct: 409 YEFVNAEKGILICTDVAARGLDIPSVDWIIQYDPPDDPKEYIHRVGRTARGVGKKGRALL 468
Query: 734 LLAPWEEYFLDDLK--DLPLDKLQLPHLN-PEIQLQMDNHMAK---IDNNVKEAAYHAWL 787
L P E FL LK +PL++ + P +Q Q++ +++ + N+ ++ AY A++
Sbjct: 469 FLLPKELGFLKYLKLAKVPLNEYEFPKSKIANVQDQLEKVVSQNFYLYNSARD-AYKAYI 527
Query: 788 GYY--NSIREIGRDKTTLVELANKFAQSIGLQRPP 820
Y +S +EI +++ A++ G PP
Sbjct: 528 CAYASHSHKEIFDVNALDLQMV---AKAFGFNDPP 559
>gi|328867087|gb|EGG15470.1| putative RNA helicase [Dictyostelium fasciculatum]
Length = 637
Score = 222 bits (565), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 161/477 (33%), Positives = 260/477 (54%), Gaps = 31/477 (6%)
Query: 361 NGNGEKKEKREEEPILSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAV 420
N N EE I F++ I T A+ G+ MT +Q ++ L+G+D +
Sbjct: 129 NNNNADNVTAEELGIEGNIEFEKLPIEEKTKLAIATMGFKTMTPIQAKSIVPLLQGRDML 188
Query: 421 VKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLK 480
A+TG+GK++AFL+PAIE ++K+ V+I+ PTRELA QI A L+
Sbjct: 189 GAARTGSGKTLAFLIPAIEVLVKSNFYPRN----GTGVIIMSPTRELALQIYGVAAELMA 244
Query: 481 NHDGIGVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVL 540
+H + ++GG K + RL +LVATPGRLLDH++N G V+ LK LV+
Sbjct: 245 HHSQTHGI-IMGGADKKAEAERLVKG-VNLLVATPGRLLDHLQNTRGFVVK--NLKCLVI 300
Query: 541 DEADHLLDLGFRKDVENIVDCLPRRRQSLLFSATMPKEL-VLKREHTYIDTVGLG----- 594
DEAD +L++GF +++ IV LP+ RQ++LFSAT ++ + R D V +G
Sbjct: 301 DEADRMLEVGFEEEMHQIVKLLPKERQTMLFSATQSNKVDAIARVSFRSDPVYVGVDDDR 360
Query: 595 SVETPVKIKQSCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREM 654
V T ++Q +V P E F +L+ LK+++ + KVIVF S+ LL +
Sbjct: 361 QVSTVEGLEQGYVVCPSEKRFLLLYTFLKKNL----NKKVIVFFSSCNSVKFHAELLNYI 416
Query: 655 KMNVREMYSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQ 714
+ V + ++ Q R EF +++ IL+ +DV+ARG+D P V ++Q P D ++
Sbjct: 417 DIPVLAFHGKQKQTLRTNTFYEFVNAQKGILLCTDVAARGVDIPSVDWIIQYDPPDDPKE 476
Query: 715 YIHRLGRTGR-EGKEGEGVLLLAPWEEYFLDDLK--DLPLDKLQLPH---LNPEIQLQ-M 767
YIHR+GRT R GK+G ++ L P E FL LK +PL++ + P N + QL+ +
Sbjct: 477 YIHRVGRTARGTGKKGRALMFLLPQELGFLKYLKLAKVPLNEYEFPQKKVSNVQEQLEKL 536
Query: 768 DNHMAKIDNNVKEAAYHAWLGYY--NSIREIGRDKTTLVELANKFAQSIGLQRPPPL 822
+H + N+ ++ AY +++ Y +S+++I D +L +L + + + G Q PP +
Sbjct: 537 ISHNFYLHNSARD-AYRSYILSYASHSLKDI-FDVNSL-QLGH-VSIAFGFQNPPKI 589
>gi|27371129|gb|AAH23303.1| Ddx10 protein, partial [Mus musculus]
Length = 681
Score = 222 bits (565), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 153/462 (33%), Positives = 251/462 (54%), Gaps = 43/462 (9%)
Query: 380 RFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIE 439
RF + +S T+K L A Y +T +Q+ T+ L+GKD + AKTG+GK++AFL+P +E
Sbjct: 70 RFSDFPLSKKTLKGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLE 129
Query: 440 AVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVD 499
A+ + +ST L VLI+ PTRELA Q + KNHD L ++GG K +
Sbjct: 130 ALYRLQWTSTDGL----GVLIISPTRELAYQTFEVLRKVGKNHDFSAGL-IIGGKDLKHE 184
Query: 500 QRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIV 559
R+ + ILV TPGRLL H++ + L+MLVLDEAD +LD+GF + I+
Sbjct: 185 AERINN--INILVCTPGRLLQHMDE--TICFHATNLQMLVLDEADRILDMGFADTMNAII 240
Query: 560 DCLPRRRQSLLFSATMPKEL-----VLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELH 614
+ LP++RQ+LLFSAT K + + ++ Y+ TP ++Q+ ++
Sbjct: 241 ENLPKKRQTLLFSATQTKSVKDLARLSLKDPEYVWVHEKAKYSTPATLEQNYIICELHQK 300
Query: 615 FQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK--MNVREMYSRKPQLYRDR 672
+L L+ H+ K IVF S+ LY + ++ +++ ++ R+ Q+ R
Sbjct: 301 ISVLFSFLRSHL----KKKSIVFFSSCKEVQYLYRVFCRLRPGISILALHGRQQQMRRME 356
Query: 673 ISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGV 732
+ EF + +L +D++ARG+D+P V V+Q P D YIHR GRT R ++GE +
Sbjct: 357 VYNEFVRKRAAVLFATDIAARGLDFPAVNWVLQFDCPEDANTYIHRAGRTARYKEDGEAL 416
Query: 733 LLLAPWEEY-FLDDL--KDLPLDKLQLPHLNPE----IQLQMDNHMAKIDNNVKEAAYHA 785
L+L P EE + L K +P+ +++ +NPE +Q ++++ +A+ D ++KE A
Sbjct: 417 LILLPSEEQGMVQQLLQKKVPVKEIK---INPEKLIDVQKKLESFLAQ-DQDLKERAQRC 472
Query: 786 WLGYYNSIREIGRDKTTLVELAN-------KFAQSIGLQRPP 820
++ Y S+ + +DK E+ N ++A S+GL P
Sbjct: 473 FVSYIRSVY-LMKDK----EVFNVSKLPITEYALSLGLAVAP 509
>gi|406607754|emb|CCH40859.1| DEAD box RNA helicase (Hca4), putative [Wickerhamomyces ciferrii]
Length = 746
Score = 222 bits (565), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 156/472 (33%), Positives = 249/472 (52%), Gaps = 38/472 (8%)
Query: 380 RFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIE 439
+F + IS T+ LT + ++ +T +Q+ ++ + L+G D + A+TG+GK++AFL+P IE
Sbjct: 42 QFKDLPISNNTLSGLTESSFVSLTDIQKESIPSALKGDDILGAARTGSGKTLAFLIPVIE 101
Query: 440 AVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVD 499
+ +A + L LI+ PTRELA QI E + + H+ ++GG K +
Sbjct: 102 KLYRAKWTELDGL----GALIISPTRELAIQIY-EVLVKIGRHNSFSAGLVIGGKDVKFE 156
Query: 500 QRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIV 559
RL IL+ TPGR+L H++ G+ L+MLVLDEAD +LD+GF+K +++IV
Sbjct: 157 MERLSK--INILIGTPGRILQHLDQTVGMDTN--NLQMLVLDEADRILDMGFKKTLDDIV 212
Query: 560 DCLPRRRQSLLFSATMPKEL--VLKREHTYIDTVGL----GSVETPVKIKQSCLVAPHEL 613
LP RQ+LLFSAT K + + + T +G+ + TP ++QS + E
Sbjct: 213 SNLPPTRQTLLFSATQSKSISDLARLSLTNPKYIGVKETDDQIATPESLQQSYITVNLEE 272
Query: 614 HFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK--MNVREMYSRKPQLYRD 671
L +K H+ K++VF ST +Y R M+ +++ +++ R+ Q R
Sbjct: 273 KLDTLFSFIKTHLKA----KILVFLSTSKQVHYVYETFRTMQPGVSLMQLHGRQKQTART 328
Query: 672 RISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEG 731
+F ++ + L +DV ARG+D+P + V+QV P D + YIHR+GR R GK G+
Sbjct: 329 ETVYKFSKAQHVCLFATDVVARGIDFPSIDWVIQVDAPEDADTYIHRVGRAARFGKTGKS 388
Query: 732 VLLLAPWEEYFLDDLKDLPLDKLQLPHLNPE------IQLQMDNHMAKIDNNVKEAAYHA 785
+L++ P EE + LK L K+ LN + I+ QM K D +K A
Sbjct: 389 LLMVTPSEEEGM--LKRLESKKIIPNKLNIKQAKKRSIRSQMQALCFK-DPELKYLGQKA 445
Query: 786 WLGYYNSIREIGRDKTTLV--EL-ANKFAQSIGLQRPPPLFRKTALKMGLKD 834
++ Y SI I +DK EL ++A+S+GL P K +K G K+
Sbjct: 446 FISYVKSIY-IQKDKDVFKPEELPVEEYAKSLGLPGAP----KIKIKGGTKN 492
>gi|407922658|gb|EKG15755.1| RNA helicase ATP-dependent DEAD-box conserved site [Macrophomina
phaseolina MS6]
Length = 675
Score = 221 bits (564), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 149/422 (35%), Positives = 232/422 (54%), Gaps = 46/422 (10%)
Query: 371 EEEPILSQKRFDECG----ISPLTIKALTAAGYIQ-MTRVQEATLSACLEGKDAVVKAKT 425
++EP ++ F E G + P ++A+ ++ MT VQ AT+ ++G D + +AKT
Sbjct: 65 QDEPRITT--FRELGEKNIVHPNIVRAVVRDMRLETMTEVQSATIHQAIQGTDLIAQAKT 122
Query: 426 GTGKSIAFLLPAIEAVLKATSS-------STTQLVPPIYVLILCPTRELASQIAAEAIAL 478
GTGK++ FLLP ++ ++ + + I +I+ PTRELA QIA EA
Sbjct: 123 GTGKTVGFLLPMLQNIISKDPALGDHDRFRKRRPSTDIRAIIISPTRELAEQIAVEA-RR 181
Query: 479 LKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENK-SGLSVRLMGLKM 537
+ + I V T VGGT K RR+ + C +LVATPGRL D + ++ SGLS L
Sbjct: 182 MTAYTSIKVQTAVGGTGKKEGMRRIMREGCHVLVATPGRLNDILSDQYSGLSA--PNLDY 239
Query: 538 LVLDEADHLLDLGFRKDVENIVDCLPRR----RQSLLFSATMPKELV------LKREHTY 587
L+ DEAD LL+ GF +++ I D LP R RQ+++FSAT+PKE+V LK +
Sbjct: 240 LIFDEADRLLESGFWAEIQAISDNLPDRDVRDRQTIMFSATIPKEVVSLVRQTLKPGFHF 299
Query: 588 IDTVGLGSVETPVKIKQSCLVA-PHELHFQILHHLLKEHILGT-----PDYKVIVFCSTG 641
+ TV T ++ Q ++ +E +L L + + P +K IVF ++
Sbjct: 300 VKTVRDDEEPTHQRVPQKVVMTRGYENQLPVLLELCQREAEASMAADKPPFKAIVFFNSL 359
Query: 642 MVTSLLYLLLREMKMNVR-----------EMYSRKPQLYRDRISEEFRASKRLILVTSDV 690
+ Y + ++ N R ++S Q R R+++ FRA+KR ++ +++V
Sbjct: 360 KEVHVAYSAFKGIRRNQRRKGALWESDLLSIHSNLTQSSRQRMADTFRAAKRAVMFSTNV 419
Query: 691 SARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLAPWEEYFL-DDLKDL 749
SARGMD+P+VT V+Q+G+P D YIHR+GRTGR GKEGE L+L +++ L L+ L
Sbjct: 420 SARGMDFPNVTHVIQLGLPRDPADYIHRIGRTGRAGKEGEAWLILPEFDDSALRTSLRHL 479
Query: 750 PL 751
P+
Sbjct: 480 PI 481
>gi|351711157|gb|EHB14076.1| Putative ATP-dependent RNA helicase DDX10 [Heterocephalus glaber]
Length = 692
Score = 221 bits (564), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 155/459 (33%), Positives = 251/459 (54%), Gaps = 37/459 (8%)
Query: 380 RFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIE 439
RF + +S T+K L A Y +T +Q+ T+ L+GKD + AKTG+GK++AFL+P +E
Sbjct: 70 RFSDFPLSKKTLKGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLE 129
Query: 440 AVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVD 499
A+ + +S L VLI+ PTRELA Q + KNHD L ++GG K +
Sbjct: 130 ALYRLQWTSMDGLG----VLIISPTRELAYQTFEVLRKVGKNHDFSAGL-IIGGKDLKHE 184
Query: 500 QRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIV 559
R+ + ILV TPGRLL H++ + L+MLVLDEAD +LD+GF + I+
Sbjct: 185 AERINN--INILVCTPGRLLQHMDE--TICFHATNLQMLVLDEADRILDMGFADTMNAII 240
Query: 560 DCLPRRRQSLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHEL 613
+ +P++RQ+LLFSAT K L LK Y+ TP ++Q+ +V +
Sbjct: 241 ENIPKKRQTLLFSATQTKSVKDLARLSLKNPE-YVWVHEKAKYSTPATLEQNYIVCELQQ 299
Query: 614 HFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK--MNVREMYSRKPQLYRD 671
+L+ L+ H+ K IVF S+ LY + ++ +++ ++ R+ Q+ R
Sbjct: 300 KLSVLYSFLRSHL----KKKSIVFFSSCKEVQYLYRVFCRLRPGISILALHGRQQQMRRM 355
Query: 672 RISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEG 731
I EF + +L +D++ARG+D+P V V+Q P D YIHR GRT R ++GE
Sbjct: 356 EIYNEFVRKRAAVLFATDIAARGLDFPAVNWVLQFDCPEDANTYIHRAGRTARYKEDGEA 415
Query: 732 VLLLAPWEEY-FLDDL--KDLPLDKLQLPHLNPE----IQLQMDNHMAKIDNNVKEAAYH 784
+L+L P EE + L K +P+ +++ +NPE +Q ++++ +A+ D ++KE A
Sbjct: 416 LLILLPSEEQGMVQQLLQKKVPVKQIK---INPEKLIDVQKKLESFLAQ-DQDLKERAQR 471
Query: 785 AWLGYYNSIREIGRDKTT--LVEL-ANKFAQSIGLQRPP 820
++ Y S+ + +DK + +L ++A S+GL P
Sbjct: 472 CFVSYIRSVY-LMKDKEVFDVSKLPITEYALSLGLAVAP 509
>gi|373858358|ref|ZP_09601095.1| DEAD/DEAH box helicase domain protein [Bacillus sp. 1NLA3E]
gi|372451825|gb|EHP25299.1| DEAD/DEAH box helicase domain protein [Bacillus sp. 1NLA3E]
Length = 560
Score = 221 bits (563), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 147/410 (35%), Positives = 209/410 (50%), Gaps = 50/410 (12%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F GIS + ++ L +G + T +QE + ++G D + +A+TGTGK+ AF+LP +E
Sbjct: 4 FLSMGISEMLVEKLQESGVVTPTPIQEQAIPYVMKGNDIIAQAQTGTGKTFAFILPILEH 63
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+ S + LI+ PTRELA QI E L+ + GI VL + GG
Sbjct: 64 LDPEASH--------VQALIVTPTRELALQITGEFKKLINDLPGIDVLAVYGGQDVDKQL 115
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
++L+ + QI+V+TPGRLLDHI + V L + LVLDEAD +L +GF +VE I+D
Sbjct: 116 KKLKKN-VQIVVSTPGRLLDHIRRGT---VNLSEISSLVLDEADQMLQIGFLNEVEEIID 171
Query: 561 CLPRRRQSLLFSATMPKEL-VLKREHT----YID---------TVGLGSVETPVKIKQSC 606
P RQ++LFSATMP E+ L R+H YI TV ++ T + KQ+
Sbjct: 172 QTPASRQTMLFSATMPPEIRTLARKHMREPKYIQVEKTQGPAQTVNQLAIHTVDRAKQAT 231
Query: 607 LVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKP 666
L+ E H L ++FC T S LY LR E++
Sbjct: 232 LIGLIEAHRPFL---------------AVIFCRTKRRVSKLYEALRSHGYKCDELHGDLS 276
Query: 667 QLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREG 726
Q R+++ + FR ++ +L+ +DV+ARG+D VT V IP D E YIHR+GRTGR G
Sbjct: 277 QAKREQVMKRFRDAEVQLLIATDVAARGLDVEGVTHVYNYDIPLDSESYIHRIGRTGRAG 336
Query: 727 KEGEGVLLLAPWEEYFLDDLKDLPLDKLQLPHLNPEIQLQMDNHMAKIDN 776
G + L A KD PL L LN I+ Q +M K D+
Sbjct: 337 MTGMAITLYAS---------KDRPLLDLIEKELNLSIEKQNLGNMEKTDD 377
>gi|423468785|ref|ZP_17445529.1| hypothetical protein IEM_00091 [Bacillus cereus BAG6O-2]
gi|402440136|gb|EJV72129.1| hypothetical protein IEM_00091 [Bacillus cereus BAG6O-2]
Length = 448
Score = 221 bits (563), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 137/383 (35%), Positives = 202/383 (52%), Gaps = 41/383 (10%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
K F E GIS L G + T +QE + + GKD + +AKTGTGK++AF+LP +
Sbjct: 5 KNFLELGISETFNHTLRENGITEATPIQEKAIPVIMSGKDIIGQAKTGTGKTLAFVLPIL 64
Query: 439 EAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
E + +S + LI+ PTRELA QI AE +L + I VL + GG
Sbjct: 65 EKIDPESSD--------VQALIVAPTRELALQITAEIKKMLVQREDINVLAIYGGQDVAQ 116
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
R+L+ + I+VATPGRLLDHI ++ + L L +VLDEAD +L GF D+E+I
Sbjct: 117 QLRKLKGN-THIVVATPGRLLDHIRRET---IDLSNLSTIVLDEADQMLYFGFLYDIEDI 172
Query: 559 VDCLPRRRQSLLFSATMPKEL--------------VLKREHTYIDTVGLGSVETPVKIKQ 604
+D P +Q++LFSATMPK++ ++ E +DT+ +ET + K
Sbjct: 173 LDETPGSKQTMLFSATMPKDIKKLAKRYMDEPQMIQVQSEEVTVDTIEQRVIETTDRAK- 231
Query: 605 SCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSR 664
P L F + + ++FC T + S LY L+ + N E++
Sbjct: 232 -----PDALRFVMDRD---------QPFLAVIFCRTKVRASKLYDNLKGLGYNCAELHGD 277
Query: 665 KPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGR 724
PQ R+R+ + FR +K L+ +DV+ARG+D VT V IP D E YIHR+GRTGR
Sbjct: 278 IPQAKRERVMKSFREAKIQYLIATDVAARGLDVDGVTHVFNFDIPEDVESYIHRIGRTGR 337
Query: 725 EGKEGEGVLLLAPWEEYFLDDLK 747
G G + +A +E L++++
Sbjct: 338 AGGSGLAITFVAAKDEKHLEEIE 360
>gi|409076083|gb|EKM76457.1| hypothetical protein AGABI1DRAFT_108779 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 803
Score = 221 bits (563), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 148/388 (38%), Positives = 206/388 (53%), Gaps = 42/388 (10%)
Query: 417 KDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQ-----LVPP---------------I 456
+D +V+AKTGTGK++ FL+P +EA LK ++ Q L P
Sbjct: 136 RDLLVRAKTGTGKTLGFLIPVVEARLKTLAAQGKQAADSGLGPSKSLAEAARRRFAKSHT 195
Query: 457 YVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILVATPG 516
+I+ PTRELA+QIA EA L++N +G GV LVGG + I+VATPG
Sbjct: 196 GAVIISPTRELATQIAQEANKLVRNIEGFGVHLLVGGESKGGQLGGFRRNAHDIIVATPG 255
Query: 517 RLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPR--RRQSLLFSAT 574
RL D +++ ++ + + LVLDEAD LLD+GF+ D+ I + +P+ RQ+ LFSAT
Sbjct: 256 RLKDILDSCPDIAESVSHTQTLVLDEADSLLDMGFQPDLLAIQEYMPKSPERQTFLFSAT 315
Query: 575 MPKEL------VLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHF--QILHHLLKEHI 626
+ + + L + HTYI+ V I Q V P H +L L + +
Sbjct: 316 ISRAIRDIARASLAKRHTYINCVSSDHSPVHAHIPQYHTVLPSAEHQIPHVLRSLAHDQL 375
Query: 627 LGTPDYKVIVFCSTGMVTSLLYLLLREMKMN---------VREMYSRKPQLYRDRISEEF 677
+ K IVF T +T L +L+ + N V E++S+K R R S F
Sbjct: 376 IHPGKSKSIVFLPTTKMTMLFAEILKNLSPNLLPAGAHTTVYELHSKKSMESRTRASNRF 435
Query: 678 R--ASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLL 735
R S IL+TSDVSARG+DYP V+ V+QVGIP EQYIHR+GRTGR G +G G L+L
Sbjct: 436 RNDVSGASILITSDVSARGVDYPGVSRVIQVGIPSTGEQYIHRVGRTGRAGTQGRGDLVL 495
Query: 736 APWEEYFL-DDLKDLPLDKLQLPHLNPE 762
PWE F+ + L + L L + L E
Sbjct: 496 LPWERGFVTNQLSQVELKPLTVQDLTTE 523
>gi|423523689|ref|ZP_17500162.1| hypothetical protein IGC_03072 [Bacillus cereus HuA4-10]
gi|401170825|gb|EJQ78060.1| hypothetical protein IGC_03072 [Bacillus cereus HuA4-10]
Length = 450
Score = 221 bits (563), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 136/387 (35%), Positives = 204/387 (52%), Gaps = 41/387 (10%)
Query: 375 ILSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFL 434
+++ K F E GIS L G + T +QE + + GKD + +AKTGTGK++AF+
Sbjct: 1 MVNMKNFLELGISETFNHTLRENGITEATPIQEKAIPVIMSGKDIIGQAKTGTGKTLAFV 60
Query: 435 LPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGT 494
LP +E + +S + LI+ PTRELA QI E +L + I VL + GG
Sbjct: 61 LPILEKIDPESSD--------VQALIVAPTRELALQITTEIKKMLVQREDINVLAIYGGQ 112
Query: 495 RFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKD 554
R+L+ + I+VATPGRLLDHI ++ + L L +VLDEAD +L GF D
Sbjct: 113 DVAQQLRKLKGN-THIVVATPGRLLDHIRRET---IDLSNLSTIVLDEADQMLYFGFLYD 168
Query: 555 VENIVDCLPRRRQSLLFSATMPKEL--------------VLKREHTYIDTVGLGSVETPV 600
+E+I+D P +Q++LFSATMPK++ ++ E +DT+ +ET
Sbjct: 169 IEDILDETPDSKQTMLFSATMPKDIKKLAKRYMDEPQMIQVQSEEVTVDTIEQRVIETTD 228
Query: 601 KIKQSCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVRE 660
+ K P L F + + ++FC T + S LY L+ + N E
Sbjct: 229 RAK------PDALRFVMDRD---------QPFLAVIFCRTKVRVSKLYDNLKGLGYNCAE 273
Query: 661 MYSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLG 720
++ PQ R+R+ + FR +K L+ +DV+ARG+D VT V IP D E YIHR+G
Sbjct: 274 LHGDIPQAKRERVMKSFREAKIQYLIATDVAARGLDVDGVTHVFNFDIPEDVESYIHRIG 333
Query: 721 RTGREGKEGEGVLLLAPWEEYFLDDLK 747
RTGR G G + +A +E L++++
Sbjct: 334 RTGRAGGSGLAITFVAAKDEKHLEEIE 360
>gi|74317119|ref|YP_314859.1| DEAD/DEAH box helicase [Thiobacillus denitrificans ATCC 25259]
gi|74056614|gb|AAZ97054.1| DEAD/DEAH box helicase [Thiobacillus denitrificans ATCC 25259]
Length = 460
Score = 221 bits (563), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 142/387 (36%), Positives = 216/387 (55%), Gaps = 16/387 (4%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F E G++P ++AL GY+ T +Q + L+G D + A+TGTGK+ AF LP I+
Sbjct: 4 FAELGLAPDILRALDEMGYVSPTPIQAQVIPRALQGGDILGAAQTGTGKTAAFALPLIQR 63
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+L ++ST+ PI LIL PTRELA Q+ EAI H + L + GG
Sbjct: 64 LLPFANTSTSPAKHPIRALILTPTRELAIQV-EEAIQAYTKHVPLRSLVVYGGVNINTQI 122
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
L++ +ILVATPGRLLDH++NK ++ L + LVLDEAD +LD+GF D+ IV
Sbjct: 123 PILKTG-VEILVATPGRLLDHVQNK---TLMLTQVNTLVLDEADRMLDMGFMPDLRRIVA 178
Query: 561 CLPRRRQSLLFSATMPKELVLKREHTYIDT---VGLGSVETPVKIKQSCLVAPHELHFQI 617
LP +R +++FSAT P+E + K + + T + + ET V + Q HE Q+
Sbjct: 179 LLPAQRVNMMFSATFPEE-IRKLADSILSTPTFIEVARNETAVTVTQVVHPVHHERKRQL 237
Query: 618 LHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEF 677
L HL+K L +V+VF T + + L L + ++ ++ K Q R + + F
Sbjct: 238 LAHLIKSRDL----RQVLVFTGTKLGCNRLANELNKAGIHADAIHGDKTQQERIKALDAF 293
Query: 678 RASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLAP 737
+A +LV +DV+ARG+D + VV +P + E Y+HR+GRTGR G +GE + L++
Sbjct: 294 KAGTIRVLVATDVAARGIDIEALPFVVNYDLPHNAEDYVHRIGRTGRAGAKGEAISLVSE 353
Query: 738 WEEYFLDDLKDL---PLDKLQLPHLNP 761
E +L D++ L PL+ + +P P
Sbjct: 354 AETRYLKDIERLIGTPLEPVIVPGFEP 380
>gi|401839497|gb|EJT42696.1| HCA4-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 770
Score = 221 bits (563), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 164/490 (33%), Positives = 256/490 (52%), Gaps = 44/490 (8%)
Query: 375 ILSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFL 434
I K F + IS T+K L + +I++T +Q ++ L+G D + AKTG+GK++AFL
Sbjct: 37 ITKAKFFKDLPISDPTLKGLRESSFIKLTEIQADSIPVSLQGHDVLAAAKTGSGKTLAFL 96
Query: 435 LPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGT 494
+P IE + + + L LI+ PTRELA QI E + + + ++GG
Sbjct: 97 VPVIEKLYREKWTEFDGL----GALIISPTRELAMQIY-EVLTKIGSRTSFSAGLVIGGK 151
Query: 495 RFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKD 554
K + R+ IL+ TPGR+L H++ GL+ L+MLVLDEAD LD+GF+K
Sbjct: 152 DVKFELERISR--INILIGTPGRILQHLDQAVGLNTS--NLQMLVLDEADRCLDMGFKKT 207
Query: 555 VENIVDCLPRRRQSLLFSATMPKEL--VLKREHTYIDTVGL-----GSV----ETPVKIK 603
++ IVD L RQ+LLFSAT + + + + T TVG GSV TP ++
Sbjct: 208 LDAIVDTLSPSRQTLLFSATQSQSVADLARLSLTDYKTVGTYDVMDGSVNKGPSTPETLQ 267
Query: 604 QSCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK--MNVREM 661
QS + P IL +K H+ K+IVF S+ +Y R+M+ +++ +
Sbjct: 268 QSYIEVPLADKLDILFSFIKSHL----KCKMIVFLSSSKQVHFVYETFRKMQPGISLMHL 323
Query: 662 YSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGR 721
+ R+ Q R ++F ++++ L +DV ARG+D+P V VVQV P D + YIHR+GR
Sbjct: 324 HGRQKQRARTETLDKFNRAQQVCLFATDVVARGIDFPAVDWVVQVDCPEDVDTYIHRVGR 383
Query: 722 TGREGKEGEGVLLLAPWEEYFLDDLKDLPLDKLQLPHLNPEIQL------QMDNHMAKID 775
R GK+G+ +++L P E+ LK L + K++ LN + Q+ + + K D
Sbjct: 384 CARYGKKGKSLIMLTPQEQETF--LKRLQIRKIEPSKLNIKQSKKKSIKPQLQSLLFK-D 440
Query: 776 NNVKEAAYHAWLGYYNSIREIGRDKTTLV--ELAN-KFAQSIGLQRPPPLFRKTALKMGL 832
+K A++ Y SI + +DK EL+ +FA S+GL P + K G+
Sbjct: 441 PELKYLGQKAFISYVRSIY-VQKDKEVFKFDELSTEEFAYSLGLPGAPKIKMK-----GM 494
Query: 833 KDIPGIRLRK 842
K I + RK
Sbjct: 495 KTIDQAKERK 504
>gi|392562331|gb|EIW55511.1| DEAD-domain-containing protein [Trametes versicolor FP-101664 SS1]
Length = 782
Score = 221 bits (562), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 182/530 (34%), Positives = 272/530 (51%), Gaps = 70/530 (13%)
Query: 320 ASLGKYDMKITKRVPLKSLEDE-HDFEEQVELIRKEISKNKLNGNGEKKEKREEEPILS- 377
+L ++ ++ + ++S E F E ++ +E + + + +E + E+P ++
Sbjct: 24 GALAQHSLRAGRFTSVRSQHTEPTTFTEAEPVVTREENVDAESSEPLVEEAKPEKPPVAN 83
Query: 378 --QKRFDEC-GI-SPLTIKALTAAGY--IQMTRVQEATLS---ACLEGKDA--------- 419
Q +F+ G+ SPL ++AL + + M+ VQ A L LE DA
Sbjct: 84 HDQPKFETLQGVASPLVLQALVKSPFRLTHMSPVQAAVLPLLPKLLEDHDAEGATGPRDL 143
Query: 420 VVKAKTGTGKSIAFLLPAIEAVLK--------ATSSSTTQLVPP------------IYVL 459
+VKA+TGTGK++AFL+PA+EA LK A TQ P + +
Sbjct: 144 LVKARTGTGKTLAFLIPAVEARLKRLQERSEWAAEELQTQSKPKLDRVVEQYARENVGAI 203
Query: 460 ILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILVATPGRLL 519
I+ PTRELA+QIA EA+ L ++ D V LVGG + R + I+VATPGRL
Sbjct: 204 IISPTRELATQIANEALKLTRHLDRFQVRLLVGGLPKRAQLREWNTRRRDIVVATPGRLR 263
Query: 520 DHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCL--PRRRQSLLFSATMPK 577
D IEN+ + + + +LDEAD LLD+GFR+D++ I + L RQ+ +FSAT+ K
Sbjct: 264 DCIENEPRFADEIKTAEQFILDEADTLLDMGFREDLQAITEVLKPSPERQTFMFSATVSK 323
Query: 578 EL------VLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILH--HLLKEHILGT 629
+ L H +I+ V ++ T + I Q P QI H +L+ L
Sbjct: 324 PIQQIARKTLAENHKFINCVPDNALPTHMSIPQYYTGLP-SAEDQIPHILNLIAHDQLSN 382
Query: 630 P-DYKVIVFCSTGMVTSLLYLLLRE---------MKMNVREMYSRKPQLYRDRISEEFRA 679
P KV+VF T +T L LL+E K +++SR R R+S+ +R
Sbjct: 383 PGKSKVLVFLPTTALTQLYSSLLQESGNRILPVGSKTRWGDLHSRMTMSSRMRVSDWYRK 442
Query: 680 SKR--LILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGR-EGKEGEGVLLLA 736
K +LVTSDVSARG+DYP VT V+QVGIP + Y+HR+GRTGR G L+L
Sbjct: 443 DKSGASVLVTSDVSARGVDYPGVTRVIQVGIPSSGDVYVHRVGRTGRGSNMSGRADLVLM 502
Query: 737 PWEEYFLD-DLKDLPLDKLQLPHLNPEIQLQMDNHMAKIDNNVKEAA-YH 784
PWE FL LKD+PL +L L ++ L++ K+D ++ E + YH
Sbjct: 503 PWELGFLTWQLKDIPLKELTTNQLKEQV-LELAQ---KVDASIPEGSEYH 548
>gi|66812114|ref|XP_640236.1| hypothetical protein DDB_G0282741 [Dictyostelium discoideum AX4]
gi|74897113|sp|Q54S03.1|DDX18_DICDI RecName: Full=Probable ATP-dependent RNA helicase ddx18; AltName:
Full=DEAD box protein 18
gi|60468220|gb|EAL66230.1| hypothetical protein DDB_G0282741 [Dictyostelium discoideum AX4]
Length = 602
Score = 221 bits (562), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 148/428 (34%), Positives = 238/428 (55%), Gaps = 32/428 (7%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F I T K++ G+ +MT +Q ++ LEGKD + A+TG+GK++AFL+PAIE
Sbjct: 121 FSNLPIEENTKKSIEEMGFKKMTPIQAKSILPLLEGKDLLGAARTGSGKTLAFLIPAIEV 180
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHD---GIGVLTLVGGTRFK 497
++K+ V+I+ PTRELA QI A L+K H GI ++GG K
Sbjct: 181 LVKSNFKPRNG----TGVIIISPTRELALQIYGVARELMKYHTQTHGI----VIGGASKK 232
Query: 498 VDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVEN 557
++ RLE +LVATPGRLLDH++N G + LK L++DEAD +L++GF +++
Sbjct: 233 PEEERLEKG-VNLLVATPGRLLDHLQNTKGFITK--NLKCLIIDEADRILEVGFEEEMHQ 289
Query: 558 IVDCLPRRRQSLLFSATMPK------ELVLKREHTYIDTVGLGSVETPVKIKQSCLVAPH 611
I+ +P+ RQ++LFSAT + ++ L Y+ + T ++Q +V P
Sbjct: 290 IIKKVPKTRQTMLFSATQTRKVDDIAKVSLNNSPVYVGVDDEREISTVEGLEQGYVVCPS 349
Query: 612 ELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRD 671
E F +L+ LK+++ K+IVF S+ LL + + V E++ R+ Q R
Sbjct: 350 ERRFLLLYTFLKKNL----SKKIIVFLSSCNAVKYTAELLNYIDIPVLELHGRQKQQKRT 405
Query: 672 RISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGRE-GKEGE 730
EF +++ IL+ +DV+ARG+D P V ++Q P D ++YIHR+GRT R GK+G
Sbjct: 406 NTFYEFVNAEKGILICTDVAARGLDIPSVDWIIQYDPPDDPKEYIHRVGRTARGVGKKGR 465
Query: 731 GVLLLAPWEEYFLDDLK--DLPLDKLQLPHLN-PEIQLQMDNHMAK---IDNNVKEAAYH 784
+L L P E FL LK +PL++ + P +Q Q++ +++ + N+ ++ AY
Sbjct: 466 ALLFLLPKELGFLKYLKLAKVPLNEYEFPKSKIANVQDQLEKVVSQNFYLYNSARD-AYK 524
Query: 785 AWLGYYNS 792
A++ Y S
Sbjct: 525 AYICAYAS 532
>gi|26342749|dbj|BAC35031.1| unnamed protein product [Mus musculus]
Length = 681
Score = 221 bits (562), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 153/462 (33%), Positives = 250/462 (54%), Gaps = 43/462 (9%)
Query: 380 RFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIE 439
RF + +S T+K L A Y +T +Q+ T+ L+GKD + AKTG+GK++AFL+P +E
Sbjct: 70 RFSDFPLSKKTLKGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLE 129
Query: 440 AVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVD 499
A+ + +ST L VLI+ PTRELA Q + KNHD L ++GG K +
Sbjct: 130 ALYRLQWTSTDGL----GVLIISPTRELAYQTFEVLRKVGKNHDFSAGL-IIGGKDLKHE 184
Query: 500 QRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIV 559
R+ + ILV TPGRLL H++ + L+MLVLDEAD +LD+GF + I+
Sbjct: 185 AERINN--INILVCTPGRLLQHMDE--TICFHATNLQMLVLDEADRILDMGFADTMNAII 240
Query: 560 DCLPRRRQSLLFSATMPKEL-----VLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELH 614
+ LP++RQ+LLFSAT K + + ++ Y+ TP ++Q+ ++
Sbjct: 241 ENLPKKRQTLLFSATQTKSVKDLARLSLKDPEYVWVHEKAKYSTPATLEQNYIICELHQK 300
Query: 615 FQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK--MNVREMYSRKPQLYRDR 672
+L L+ H+ K IVF S+ LY + ++ ++ ++ R+ Q+ R
Sbjct: 301 ISVLFSFLRSHL----KKKSIVFFSSCKEVQYLYRVFCRLRPGISTLALHGRQQQMRRME 356
Query: 673 ISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGV 732
+ EF + +L +D++ARG+D+P V V+Q P D YIHR GRT R ++GE +
Sbjct: 357 VYNEFVRKRAAVLFATDIAARGLDFPAVNWVLQFDCPEDANTYIHRAGRTARYKEDGEAL 416
Query: 733 LLLAPWEEY-FLDDL--KDLPLDKLQLPHLNPE----IQLQMDNHMAKIDNNVKEAAYHA 785
L+L P EE + L K +P+ +++ +NPE +Q ++++ +A+ D ++KE A
Sbjct: 417 LILLPSEEQGMVQQLLQKKVPVKEIK---INPEKLIDVQKKLESFLAQ-DQDLKERAQRC 472
Query: 786 WLGYYNSIREIGRDKTTLVELAN-------KFAQSIGLQRPP 820
++ Y S+ + +DK E+ N ++A S+GL P
Sbjct: 473 FVSYIRSVY-LMKDK----EVFNVSKLPITEYALSLGLAVAP 509
>gi|409051397|gb|EKM60873.1| hypothetical protein PHACADRAFT_110678 [Phanerochaete carnosa
HHB-10118-sp]
Length = 542
Score = 221 bits (562), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 157/462 (33%), Positives = 243/462 (52%), Gaps = 39/462 (8%)
Query: 378 QKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPA 437
+K F E +S TIKAL+ G+ MT +QE ++ L GKD + A+TG+GK++AFL+PA
Sbjct: 21 RKPFSELELSEPTIKALSGMGFTHMTAIQEKSIPPLLAGKDVLGAARTGSGKTLAFLIPA 80
Query: 438 IEAV--LKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTR 495
+E + +K + T +V I+ PTRELA QI A L+ +H + + G
Sbjct: 81 VELLHRMKFKPRNGTGIV------IVSPTRELALQIFGVAKELMAHHSQTFGIVMGGA-- 132
Query: 496 FKVDQRRLESDPCQ----ILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGF 551
RR E+D Q ++VATPGRLLDH+EN G R LK LV+DEAD +L++GF
Sbjct: 133 ----NRRAEADKLQKGVNLVVATPGRLLDHLENTKGFVFR--NLKCLVIDEADRILEVGF 186
Query: 552 RKDVENIVDCLPRR-RQSLLFSATMPKELV------LKREHTYIDTVGLGSVETPVKIKQ 604
++++ I+ LP RQS+LFSAT ++ L+ YID S T + Q
Sbjct: 187 EEEMKKIIAILPNENRQSMLFSATQTTKVTDLARISLRPGPLYIDVDKTESTSTVSTLSQ 246
Query: 605 SCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSR 664
+V P + F +L LK+H+ K++VF S+ LL + + +++ +
Sbjct: 247 GYVVCPSDRRFLLLFTFLKKHM----KKKIVVFFSSCNSVKYHAELLNYIDVPTLDLHGK 302
Query: 665 KPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGR 724
+ Q R EF ++ IL+ +DV+ARG+D P V ++Q P D YIHR+GRT R
Sbjct: 303 QKQQKRTNTFFEFCNAESGILLCTDVAARGLDIPRVDWIIQYDPPDDPRDYIHRVGRTAR 362
Query: 725 EGKEGEGVLLLAPWEEYFLDDLKD--LPLDKLQLPHLN-PEIQLQMDNHMAK---IDNNV 778
GK G+ ++ L P E FL LK+ +PL++ P +Q Q++ + K + +
Sbjct: 363 AGKVGKSLMFLLPSELGFLRFLKEAKVPLNEFSFPADKIANVQSQLEKLLQKNYFLHQSA 422
Query: 779 KEAAYHAWLGYYNSIREIGRDKTTLVELANKFAQSIGLQRPP 820
K+ + ++L Y S ++LA K ++ G PP
Sbjct: 423 KD-GFRSYLQAYASYSLKKIFDVNQLDLA-KVGKAFGFSVPP 462
>gi|326480409|gb|EGE04419.1| ATP-dependent RNA helicase mss116 [Trichophyton equinum CBS 127.97]
Length = 643
Score = 221 bits (562), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 159/473 (33%), Positives = 242/473 (51%), Gaps = 51/473 (10%)
Query: 319 SASLGKYDMKITKRVPLKSLEDEHDFEEQVELIRKEISKNKLNGNGEKKEKREEEPILSQ 378
+++L K+ ++ R+P+ L F + + N ++ E E I
Sbjct: 23 ASTLAKHSIR---RLPIAPLLTSRAFHASPQF---RVPAGTANAGVAVEDVGEAELITEF 76
Query: 379 KRFDECGI-SPLTIKALT-AAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLP 436
E G+ I A+T G MT VQ T++ ++G D + +AKTGTGK++AFLLP
Sbjct: 77 SELGEKGVVDQRLINAITKGMGLKTMTDVQAQTINESIQGIDMIAQAKTGTGKTVAFLLP 136
Query: 437 AIEAVLKATSSSTTQL----VPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVG 492
I +L+ + + I +++ PTRELA QIA EA + + G+ V T VG
Sbjct: 137 VIHIILQDPTLGNLRRNFASAQDIRAVVISPTRELAEQIAVEAQKITRG-SGLKVQTAVG 195
Query: 493 GTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFR 552
GTR + RL+ + C ILV TPGRL+D + + V L+ VLDEAD LLD+GF
Sbjct: 196 GTRKREGLMRLQREGCHILVGTPGRLMDLFSDPTS-GVAAPKLQAFVLDEADRLLDIGFA 254
Query: 553 KDVENIVDCLPRR----RQSLLFSATMPKEL------VLKREHTYIDTVGLGSVETPVKI 602
D+E I P R RQ+L+FSAT+PK + +LK + +++TVG ETP +
Sbjct: 255 PDIERIQSFFPSRSQVDRQTLMFSATIPKSVKGLARSMLKPDFIFVNTVG---DETPTHL 311
Query: 603 K---QSCLVAPHELHFQILHHLLKEHI---LGTPD----YKVIVFCSTGMVTSL----LY 648
+ ++ + E L + K + PD +K +V+ + S+
Sbjct: 312 RVPQRAVFLRGFENQLPALFEIAKRAVQAHAANPDTAMPFKAVVYYGSTAEVSVARRAFT 371
Query: 649 LLLREM---------KMNVREMYSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPD 699
L R++ ++ EM+SR Q R S+ FR + IL +SDV+ARGMD+P+
Sbjct: 372 ALCRDLESLYTGRAPRIQTIEMHSRLTQAQRTFNSDSFRRATTGILFSSDVTARGMDFPN 431
Query: 700 VTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLAPWE-EYFLDDLKDLPL 751
V+ V+Q+G+P D + YIHRLGRT R K GEG +L E + F + L+ LP+
Sbjct: 432 VSHVIQMGVPNDTDTYIHRLGRTARADKTGEGWILFPDIEFDAFGEKLRSLPI 484
>gi|431907502|gb|ELK11354.1| Putative ATP-dependent RNA helicase DDX10 [Pteropus alecto]
Length = 715
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 147/429 (34%), Positives = 236/429 (55%), Gaps = 33/429 (7%)
Query: 380 RFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIE 439
RF + +S T+K L A Y +T +Q+ T+ L+GKD + AKTG+GK++AFL+P +E
Sbjct: 70 RFSDFPLSKKTLKGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLE 129
Query: 440 AVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVD 499
A+ + +ST L VLI+ PTRELA Q + KNH+ L ++GG K +
Sbjct: 130 ALYRLQWTSTDGL----GVLIISPTRELAYQTFEVLRKVGKNHEFSAGL-IIGGKDLKHE 184
Query: 500 QRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIV 559
R+ + ILV TPGRLL H++ + L+MLVLDEAD +LD+GF + I+
Sbjct: 185 AERINN--INILVCTPGRLLQHMDET--ICFHATNLQMLVLDEADRILDMGFADTMNAII 240
Query: 560 DCLPRRRQSLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHEL 613
+ LP++RQ+LLFSAT K L LK Y+ TP ++Q+ +V +
Sbjct: 241 ENLPKKRQTLLFSATQTKSVKDLARLSLKNPE-YVWVHEKAKYSTPATLEQNYIVCELQQ 299
Query: 614 HFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK--MNVREMYSRKPQLYRD 671
+L+ L+ H+ K IVF S+ LY + ++ +++ ++ R+ Q+ R
Sbjct: 300 KISVLYSFLRSHL----KKKSIVFFSSCKEVQYLYRVFCRLRPGISILALHGRQQQMRRM 355
Query: 672 RISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEG 731
+ EF + +L +D++ARG+D+P V V+Q P D YIHR GRT R ++GE
Sbjct: 356 EVYNEFVRKRAAVLFATDIAARGLDFPAVNWVLQFDCPEDANTYIHRAGRTARYKEDGEA 415
Query: 732 VLLLAPWEEY-FLDDL--KDLPLDKLQLPHLNPE----IQLQMDNHMAKIDNNVKEAAYH 784
+L+L P EE + L K +P+ ++ +NPE +Q ++++ +A+ D ++KE A
Sbjct: 416 LLILLPSEEKGMVQQLLQKKVPVKAIK---INPEKLIDVQKKLESFLAQ-DQDLKERAQR 471
Query: 785 AWLGYYNSI 793
++ Y S+
Sbjct: 472 CFVSYIRSV 480
>gi|426194425|gb|EKV44356.1| hypothetical protein AGABI2DRAFT_194436 [Agaricus bisporus var.
bisporus H97]
Length = 814
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 157/437 (35%), Positives = 222/437 (50%), Gaps = 57/437 (13%)
Query: 383 ECGISPLTIKALTAAGY--IQMTRVQEATL-------------SACLEGKDAVVKAKTGT 427
+ + P I+ALT + M+ VQ L +A +D +V+AKTGT
Sbjct: 87 QGSVDPRVIRALTGNPFNLTTMSVVQAQVLPLLPGLAEPYDTENAPEHPRDLLVRAKTGT 146
Query: 428 GKSIAFLLPAIEAVLKATSSSTTQ-----LVPP---------------IYVLILCPTREL 467
GK++ FL+P +EA LK ++ Q L P +I+ PTREL
Sbjct: 147 GKTLGFLIPVVEARLKTLAAQGKQATDSGLGPSKSLAEAARRRFAKSHTGAVIISPTREL 206
Query: 468 ASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSG 527
A+QIA EA L++N +G GV LVGG + I+VATPGRL D +++
Sbjct: 207 ATQIAQEANKLVRNIEGFGVHLLVGGESKGGQLGGFRRNAHDIIVATPGRLKDILDSCPD 266
Query: 528 LSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPR--RRQSLLFSATMPKEL------ 579
++ + + LVLDEAD LLD+GF+ D+ I + +P+ RQ+ LFSAT+ + +
Sbjct: 267 IAESVSHTQTLVLDEADSLLDMGFQPDLLAIQEYMPKSPERQTFLFSATISRAIRDIARA 326
Query: 580 VLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHF--QILHHLLKEHILGTPDYKVIVF 637
L + HTYI+ V I Q V P H +L L + ++ K IVF
Sbjct: 327 SLAKRHTYINCVSSDHSPVHAHIPQYHTVLPSAEHQIPHVLRSLAHDQLIHPGKSKSIVF 386
Query: 638 CSTGMVTSLLYLLLREMKMN---------VREMYSRKPQLYRDRISEEFR--ASKRLILV 686
T +T L +L+ + N V E++S+K R R S FR S IL+
Sbjct: 387 LPTTKMTMLFAEILKNLSPNLLPAGAHTTVYELHSKKSMESRTRASNRFRNDVSGASILI 446
Query: 687 TSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLAPWEEYFL-DD 745
TSDVSARG+DYP V+ V+QVGIP EQY+HR+GRTGR G +G G L+L PWE F+ +
Sbjct: 447 TSDVSARGVDYPGVSRVIQVGIPSTGEQYVHRVGRTGRAGTQGRGDLVLLPWERGFVTNQ 506
Query: 746 LKDLPLDKLQLPHLNPE 762
L + L L + L E
Sbjct: 507 LSQVELKPLTVQDLTNE 523
>gi|326433585|gb|EGD79155.1| helicase pitchoune [Salpingoeca sp. ATCC 50818]
Length = 649
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 136/383 (35%), Positives = 220/383 (57%), Gaps = 26/383 (6%)
Query: 386 ISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAV--LK 443
+S T+KA+ G+ MT +Q T+ L G+D + AKTG+GK++AFL+PA+E + LK
Sbjct: 179 VSEPTMKAIEGFGFTHMTEIQYKTIPFLLTGRDLLGAAKTGSGKTLAFLIPAVERLRQLK 238
Query: 444 ATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRL 503
T + T + IL PTRELA QI I+LL++H ++ +GG+ K + RRL
Sbjct: 239 FTPKNGTGCI------ILTPTRELAQQIYGVLISLLEHHHQTHGIS-IGGSDKKAEARRL 291
Query: 504 ESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLP 563
+ ILV TPGRLLDH++N + + L+ML++DEAD +L +GF + IV +P
Sbjct: 292 -GNGVNILVCTPGRLLDHLQN---TNFKFDRLQMLIIDEADRILQIGFEDTMRAIVRLIP 347
Query: 564 RRRQSLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQI 617
++RQ++LFSAT ++ + L+ E YI + T I+Q ++ P + F++
Sbjct: 348 QKRQTVLFSATQTRKVEDLARISLRGEPLYIGVDDKADIATADGIEQGYVICPSDQRFRL 407
Query: 618 LHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEF 677
L+ LK+++ K++VF S+ + + V ++ R+ Q R R EF
Sbjct: 408 LYTFLKKNL----KRKLMVFFSSCDSVEFHLQFFNYVSLPVLGIHGRQKQAKRSRTFFEF 463
Query: 678 RASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGR-EGKEGEGVLLLA 736
+++ IL+ +DV+ARG+D P+V ++Q P D ++YIHR+GRT R G++G +L L
Sbjct: 464 CNAEQGILLCTDVAARGLDIPEVDWIIQYDAPDDPKEYIHRVGRTARGAGRKGRALLFLL 523
Query: 737 PWEEYFLDDLKD--LPLDKLQLP 757
P E FL L + +PL++ + P
Sbjct: 524 PTEVEFLKYLMENKVPLNEYEFP 546
>gi|410971865|ref|XP_004001580.1| PREDICTED: LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase
DDX10 [Felis catus]
Length = 881
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 148/435 (34%), Positives = 238/435 (54%), Gaps = 38/435 (8%)
Query: 380 RFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIE 439
RF + +S T+K L A Y +T +Q+ T+ L+GKD + AKTG+GK++AFL+P +E
Sbjct: 70 RFSDFPLSKKTLKGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLE 129
Query: 440 AVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVD 499
A+ + +ST L VLI+ PTRELA Q + KNHD L ++GG K +
Sbjct: 130 ALYRLQWTSTDGLG----VLIISPTRELAYQTFEVLRKVGKNHDFSAGL-IIGGKDLKHE 184
Query: 500 QRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIV 559
R+ + ILV TPGRLL H++ + L+MLVLDEAD +LD+GF + I+
Sbjct: 185 AERINN--INILVCTPGRLLQHMDE--TICFHATNLQMLVLDEADRILDMGFADTMNAII 240
Query: 560 DCLPRRRQSLLFSATMPKE------LVLKR-EHTYIDTVG-----LGSVETPVKIKQSCL 607
+ LP++RQ+LLFSAT K L LK E+ ++ L ++Q+ +
Sbjct: 241 ENLPKKRQTLLFSATQTKSVKDLARLSLKNPEYVWVHEKAKYRAMLXXXXXXXTLEQNYI 300
Query: 608 VAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK--MNVREMYSRK 665
V + +L+ L+ H+ K IVF S+ LY + ++ +++ ++ R+
Sbjct: 301 VCELQQKXSVLYSFLRSHL----KKKSIVFFSSCKEVQYLYRVFCRLRPGISILALHGRQ 356
Query: 666 PQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGRE 725
Q+ R + EF K +L +D++ARG+D+P V V+Q P D YIHR GRT R
Sbjct: 357 QQMRRMEVYNEFVRKKAAVLFATDIAARGLDFPAVNWVLQFDCPEDANTYIHRAGRTARY 416
Query: 726 GKEGEGVLLLAPWEEY-FLDDL--KDLPLDKLQLPHLNPE----IQLQMDNHMAKIDNNV 778
++GE +L+L P EE + L K +P+ +++ +NPE +Q ++++ +A+ D ++
Sbjct: 417 KEDGEALLILLPSEEKGMVQQLLQKKVPVKEIR---INPEKLIDVQKKLESFLAQ-DQDL 472
Query: 779 KEAAYHAWLGYYNSI 793
KE A ++ Y S+
Sbjct: 473 KERAQRCFVSYIRSV 487
>gi|326475247|gb|EGD99256.1| hypothetical protein TESG_06523 [Trichophyton tonsurans CBS 112818]
Length = 643
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 159/473 (33%), Positives = 242/473 (51%), Gaps = 51/473 (10%)
Query: 319 SASLGKYDMKITKRVPLKSLEDEHDFEEQVELIRKEISKNKLNGNGEKKEKREEEPILSQ 378
+++L K+ ++ R+P+ L F + + N ++ E E I
Sbjct: 23 ASTLAKHSIR---RLPIAPLLTSRAFHASPQF---RVPAGTANAGVAVEDVGEAELITEF 76
Query: 379 KRFDECGI-SPLTIKALT-AAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLP 436
E G+ I A+T G MT VQ T++ ++G D + +AKTGTGK++AFLLP
Sbjct: 77 SELGEKGVVDQRLINAITKGMGLKTMTDVQAQTINESIQGIDMIAQAKTGTGKTVAFLLP 136
Query: 437 AIEAVLKATSSSTTQL----VPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVG 492
I +L+ + + I +++ PTRELA QIA EA + + G+ V T VG
Sbjct: 137 VIHRILQDPTLGNLRRNFASAQDIRAVVISPTRELAEQIAVEAQKITRG-SGLKVQTAVG 195
Query: 493 GTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFR 552
GTR + RL+ + C ILV TPGRL+D + + V L+ VLDEAD LLD+GF
Sbjct: 196 GTRKREGLMRLQREGCHILVGTPGRLMDLFSDPTS-GVAAPKLQAFVLDEADRLLDIGFA 254
Query: 553 KDVENIVDCLPRR----RQSLLFSATMPKEL------VLKREHTYIDTVGLGSVETPVKI 602
D+E I P R RQ+L+FSAT+PK + +LK + +++TVG ETP +
Sbjct: 255 PDIERIQSFFPSRSQVDRQTLMFSATIPKSVKGLARSMLKPDFIFVNTVG---DETPTHL 311
Query: 603 K---QSCLVAPHELHFQILHHLLKEHI---LGTPD----YKVIVFCSTGMVTSL----LY 648
+ ++ + E L + K + PD +K +V+ + S+
Sbjct: 312 RVPQRAVFLRGFENQLPALFEIAKRAVQAHAANPDTAMPFKAVVYYGSTAEVSVARRAFT 371
Query: 649 LLLREM---------KMNVREMYSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPD 699
L R++ ++ EM+SR Q R S+ FR + IL +SDV+ARGMD+P+
Sbjct: 372 ALCRDLESLYTGRAPRIQTIEMHSRLTQAQRTFNSDSFRRATTGILFSSDVTARGMDFPN 431
Query: 700 VTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLAPWE-EYFLDDLKDLPL 751
V+ V+Q+G+P D + YIHRLGRT R K GEG +L E + F + L+ LP+
Sbjct: 432 VSHVIQMGVPNDTDTYIHRLGRTARADKTGEGWILFPDIEFDAFGEKLRSLPI 484
>gi|149631935|ref|XP_001509692.1| PREDICTED: probable ATP-dependent RNA helicase DDX10
[Ornithorhynchus anatinus]
Length = 859
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 158/481 (32%), Positives = 259/481 (53%), Gaps = 45/481 (9%)
Query: 380 RFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIE 439
RF + +S T+K L A Y +T +Q+ T+ L+GKD + AKTG+GK++AFL+P +E
Sbjct: 67 RFSDFPLSKKTLKGLQEAQYRMVTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLE 126
Query: 440 AVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVD 499
++ + +S L VLI+ PTRELA Q + KNH+ L ++GG K +
Sbjct: 127 SLYRQQWTSMDGL----GVLIISPTRELAYQTFEVLRKVGKNHEFSAGL-IIGGKDLKQE 181
Query: 500 QRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIV 559
R+ + IL+ TPGRLL H++ + L+MLVLDEAD +LD+GF + I+
Sbjct: 182 SERI--NQINILICTPGRLLQHMDETTYFHAS--NLQMLVLDEADRILDMGFADTMNAII 237
Query: 560 DCLPRRRQSLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHEL 613
+ LPR+RQ+LLFSAT K L LK + Y+ TP ++Q+ +V +
Sbjct: 238 ENLPRKRQTLLFSATQTKSVKDLARLSLK-DPEYVWVHEKAKFSTPATLEQNYIVCELQQ 296
Query: 614 HFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK--MNVREMYSRKPQLYRD 671
+L+ L+ H+ K IVF S+ L+ + ++ +++ ++ ++ Q+ R
Sbjct: 297 KINMLYSFLRSHL----KKKSIVFFSSCKEVQYLFRVFCRLRPGLSILALHGKQQQMKRM 352
Query: 672 RISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEG 731
+ +F K +L +D++ARG+D+P V V+Q P D YIHR GRT R + GE
Sbjct: 353 EVYNDFVRKKSAVLFATDIAARGLDFPAVNWVLQFDCPEDANTYIHRAGRTARYKEGGEA 412
Query: 732 VLLLAPWEEY-FLDDL--KDLPLDKLQLPHLNPE----IQLQMDNHMAKIDNNVKEAAYH 784
+L+L P EE + L K +P+++++ +NPE IQ +++ +A+ D +KE A
Sbjct: 413 LLVLLPSEEKGMVQQLTQKKVPVNEIK---INPEKLVDIQKRLEAFLAQ-DQELKERAQR 468
Query: 785 AWLGYYNSI-----REI-GRDKTTLVELANKFAQSIGLQRPPPL-FRKTALKMGLKDIPG 837
++ Y S+ +E+ +K L E +A S+GL P + F + K+ K+ PG
Sbjct: 469 CFVSYLRSVYLMKNKEVFNVNKLPLAE----YALSLGLAVAPRVRFLQRIQKLATKE-PG 523
Query: 838 I 838
+
Sbjct: 524 L 524
>gi|239613981|gb|EEQ90968.1| ATP-dependent RNA helicase DBP4 [Ajellomyces dermatitidis ER-3]
gi|327353332|gb|EGE82189.1| ATP-dependent RNA helicase DBP4 [Ajellomyces dermatitidis ATCC
18188]
Length = 810
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 153/477 (32%), Positives = 247/477 (51%), Gaps = 34/477 (7%)
Query: 377 SQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLP 436
S + F + +S T+ L+A+ + +T +Q + L+G+D + AKTG+GK++AFL+P
Sbjct: 47 SPEAFSDLPLSEPTLNGLSASHFKSLTDIQAKAIPHALKGRDILGAAKTGSGKTLAFLVP 106
Query: 437 AIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRF 496
+E + + + L L+L PTRELA QI E + + H ++GG
Sbjct: 107 LLELLYRKQWTEYDGL----GALVLSPTRELAIQIF-EVLRKIGRHHTFSAGLVIGGKSL 161
Query: 497 KVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVE 556
+ +Q RL ILV TPGR+L H++ + +++LVLDEAD ++D+GF+ V+
Sbjct: 162 QEEQERLGR--MNILVCTPGRMLQHMDQTAAFDTN--HIQLLVLDEADRIMDMGFQSTVD 217
Query: 557 NIVDCLPRRRQSLLFSATMPKEL-----VLKREHTYIDTVGLGSVETPVKIKQSCLVAPH 611
I+D LP+ RQ++LFSAT K++ + R YI + TP K++Q+ +V P
Sbjct: 218 AIIDHLPKERQTMLFSATQTKKVSDLARLSLRNPEYISVHETAASATPAKLQQNYIVTPL 277
Query: 612 ELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK--MNVREMYSRKPQLY 669
L ++ + K++VF S+G +Y R M+ +++ ++ R+ Q
Sbjct: 278 PEKLDTLWSFIRSSLKS----KIMVFFSSGKQVRFVYESFRHMQPGISLLHLHGRQKQGA 333
Query: 670 RDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEG 729
R I+++F A+K L ++D++ARG+D+P V V+QV P D + YIHR GRT R + G
Sbjct: 334 RVDITKKFSAAKHACLFSTDIAARGLDFPAVDWVIQVDCPEDADTYIHRAGRTARYERNG 393
Query: 730 EGVLLLAPWEEYFLDDLKDLPLDKLQLPHLN------PEIQLQMDNHMAKIDNNVKEAAY 783
VL L P EE + LK L K+ + +N I+ Q+ N M D +K
Sbjct: 394 RAVLFLEPSEEAGM--LKRLEQKKIPIEKINIRSKKQQSIKNQLQN-MCFKDPALKYLGQ 450
Query: 784 HAWLGYYNSIREIGRDKTTLVELA---NKFAQSIGLQRPPPL-FRKTALKMGLKDIP 836
A++ Y SI + +DK V +A S+GL P + F K LK+ P
Sbjct: 451 KAFISYVKSIH-VQKDKEVFVVKGLPLEAYAASLGLPGAPRIKFIKGEDSKKLKNAP 506
>gi|340516612|gb|EGR46860.1| predicted protein [Trichoderma reesei QM6a]
Length = 815
Score = 220 bits (561), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 131/364 (35%), Positives = 198/364 (54%), Gaps = 20/364 (5%)
Query: 384 CGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLK 443
ISP T L A+ + MT +QE + L+GKD + AKTG+GK++AFL+P +E + +
Sbjct: 57 SAISPATASGLHASHFTNMTEIQEQAIPLALKGKDILGAAKTGSGKTLAFLVPVLEKLYR 116
Query: 444 ATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRL 503
A + L LIL PTRELA QI E + + H ++GG K + RL
Sbjct: 117 AQWTEFDGL----GALILSPTRELAVQIF-EVLRKIGRHHAFSAGLVIGGKSLKEEAERL 171
Query: 504 ESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLP 563
ILV TPGR+L H++ +G L++LVLDEAD ++D+GF+ V+ +V+ LP
Sbjct: 172 IR--MNILVCTPGRMLQHLDQTAGFDAN--NLQILVLDEADRIMDMGFQSAVDALVEHLP 227
Query: 564 RRRQSLLFSATMPKEL-----VLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQIL 618
+ RQ+L+FSAT K++ + ++ Y+ S TP ++Q +V P L
Sbjct: 228 KTRQTLMFSATQSKKVSDLARLSLKDPEYVSVHQDASTATPTTLQQHYIVTPLPEKLDTL 287
Query: 619 HHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK--MNVREMYSRKPQLYRDRISEE 676
+ +K ++ K+IVF S+G +Y R ++ + + ++ R+ Q+ R I+
Sbjct: 288 YGFIKANVKS----KIIVFLSSGKQVRFVYESFRHLQPGIPLLHLHGRQKQVARLEITNR 343
Query: 677 FRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLA 736
F A+K L +DV ARG+D+P V V+QV P D + YIHR+GRT R G VL L
Sbjct: 344 FTAAKTSCLFATDVVARGIDFPAVDWVIQVDCPEDADTYIHRVGRTARFQSNGRAVLFLD 403
Query: 737 PWEE 740
P EE
Sbjct: 404 PSEE 407
>gi|261193373|ref|XP_002623092.1| ATP-dependent RNA helicase DBP4 [Ajellomyces dermatitidis SLH14081]
gi|239588697|gb|EEQ71340.1| ATP-dependent RNA helicase DBP4 [Ajellomyces dermatitidis SLH14081]
Length = 810
Score = 220 bits (560), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 153/477 (32%), Positives = 247/477 (51%), Gaps = 34/477 (7%)
Query: 377 SQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLP 436
S + F + +S T+ L+A+ + +T +Q + L+G+D + AKTG+GK++AFL+P
Sbjct: 47 SPEAFSDLPLSEPTLNGLSASHFKSLTDIQAKAIPHALKGRDILGAAKTGSGKTLAFLVP 106
Query: 437 AIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRF 496
+E + + + L L+L PTRELA QI E + + H ++GG
Sbjct: 107 LLELLYRKQWTEYDGL----GALVLSPTRELAIQIF-EVLRKIGRHHTFSAGLVIGGKSL 161
Query: 497 KVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVE 556
+ +Q RL ILV TPGR+L H++ + +++LVLDEAD ++D+GF+ V+
Sbjct: 162 QEEQERLGR--MNILVCTPGRMLQHMDQTAAFDTN--HIQLLVLDEADRIMDMGFQSTVD 217
Query: 557 NIVDCLPRRRQSLLFSATMPKEL-----VLKREHTYIDTVGLGSVETPVKIKQSCLVAPH 611
I+D LP+ RQ++LFSAT K++ + R YI + TP K++Q+ +V P
Sbjct: 218 AIIDHLPKERQTMLFSATQTKKVSDLARLSLRNPEYISVHETAASATPAKLQQNYIVTPL 277
Query: 612 ELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK--MNVREMYSRKPQLY 669
L ++ + K++VF S+G +Y R M+ +++ ++ R+ Q
Sbjct: 278 PEKLDTLWSFIRSSLKS----KIMVFFSSGKQVRFVYESFRHMQPGISLLHLHGRQKQGA 333
Query: 670 RDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEG 729
R I+++F A+K L ++D++ARG+D+P V V+QV P D + YIHR GRT R + G
Sbjct: 334 RVDITKKFSAAKHACLFSTDIAARGLDFPAVDWVIQVDCPEDADTYIHRAGRTARYERNG 393
Query: 730 EGVLLLAPWEEYFLDDLKDLPLDKLQLPHLN------PEIQLQMDNHMAKIDNNVKEAAY 783
VL L P EE + LK L K+ + +N I+ Q+ N M D +K
Sbjct: 394 RAVLFLEPSEEAGM--LKRLEQKKIPIEKINIRSKKQQSIKNQLQN-MCFKDPALKYLGQ 450
Query: 784 HAWLGYYNSIREIGRDKTTLVELA---NKFAQSIGLQRPPPL-FRKTALKMGLKDIP 836
A++ Y SI + +DK V +A S+GL P + F K LK+ P
Sbjct: 451 KAFISYVKSI-HVQKDKEVFVVKGLPLEAYAASLGLPGAPRIKFIKGEDSKKLKNAP 506
>gi|115704798|ref|XP_780056.2| PREDICTED: probable ATP-dependent RNA helicase DDX10-like
[Strongylocentrotus purpuratus]
Length = 867
Score = 220 bits (560), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 154/490 (31%), Positives = 265/490 (54%), Gaps = 32/490 (6%)
Query: 345 EEQVELIRKEISKNKLNGNGEKKEKREEEPILSQKRFDECGISPLTIKALTAAGYIQMTR 404
E+++ L + ++ + ++N E+ + + + I S F + +S T+ AL AGY T
Sbjct: 31 EDKLALKKMQLERKEINELMEQYSQIDTQKIES---FSDFPLSKRTLSALEEAGYKVPTE 87
Query: 405 VQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLVPP-IYVLILCP 463
+Q + L+G D + AKTG+GK++AFL+P +E + + + S VP + L++ P
Sbjct: 88 IQRGAIGLSLQGHDVLGAAKTGSGKTLAFLIPILECLYRNSWS-----VPDGLGALVISP 142
Query: 464 TRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIE 523
TRELA Q + NHD L ++GG K + R+ ++V TPGRLL H++
Sbjct: 143 TRELAYQTFEVLCKVGANHDFSAGL-IIGGKDLKTEMERIPK--TNVVVCTPGRLLQHMD 199
Query: 524 NKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQSLLFSATMPKELV-LK 582
+ + LK+LVLDEAD +LDLGF++ ++ I+D LP RQ+LLFSAT K + L
Sbjct: 200 ETACFES--LNLKILVLDEADRILDLGFQRTIDAILDHLPAERQTLLFSATQTKSVRDLA 257
Query: 583 R----EHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILHHLLKEHILGTPDYKVIVFC 638
R E Y+ + TPV+++QS +V E +L+ +K H+ K +VF
Sbjct: 258 RLSLLEPKYVAVHEHHTHSTPVQLEQSYIVCELEQKLDVLYSFIKAHM----KQKTLVFM 313
Query: 639 STGMVTSLLYLLLREMK--MNVREMYSRKPQLYRDRISEEFRASKRLILVTSDVSARGMD 696
S+ + +L ++ ++V +Y QL R + EEF + +L+ +D++ARG+D
Sbjct: 314 SSCKQVKYTFEVLCKLNPGVSVMALYGSMHQLRRMAVYEEFCVRESAVLLATDIAARGLD 373
Query: 697 YPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLAP---WEEYFLDDLKDLPLDK 753
+P V VVQ+ P D YIHR+GRT R K+GE +L+L P + + +P++K
Sbjct: 374 FPAVNWVVQLDCPEDSSTYIHRVGRTARYEKDGEALLVLLPSEEEAMVAEMETRRIPIEK 433
Query: 754 LQL-PHLNPEIQLQMDNHMAKIDNNVKEAAYHAWLGYYNSIREIGRDKTTLVEL--ANKF 810
+++ P+ I+ ++ + A+ + +K++A A++ Y S+ + V + + F
Sbjct: 434 IEVNPNKRFAIEKKLQSFCAQ-NLELKQSAQRAFIAYLKSVYLMKNKDIFHVHVLSLDNF 492
Query: 811 AQSIGLQRPP 820
A+++GL P
Sbjct: 493 AKALGLAVAP 502
>gi|229133365|ref|ZP_04262193.1| ATP-dependent RNA helicase [Bacillus cereus BDRD-ST196]
gi|228650038|gb|EEL06045.1| ATP-dependent RNA helicase [Bacillus cereus BDRD-ST196]
Length = 450
Score = 220 bits (560), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 136/383 (35%), Positives = 201/383 (52%), Gaps = 41/383 (10%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
K F E GIS L G + T +QE + + GKD + +AKTGTGK++AF+LP +
Sbjct: 5 KNFLELGISETFNHTLRENGITEATPIQEKAIPVIMSGKDVIGQAKTGTGKTLAFVLPIL 64
Query: 439 EAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
E + +S + LI+ PTRELA QI E +L + I VL + GG
Sbjct: 65 EKIDPESSD--------VQALIVAPTRELALQITTEIKKMLVQREDINVLAIYGGQDVAQ 116
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
R+L+ + I+VATPGRLLDHI ++ + L L +VLDEAD +L GF D+E+I
Sbjct: 117 QLRKLKGN-THIVVATPGRLLDHIRRET---IDLSNLSTIVLDEADQMLYFGFLYDIEDI 172
Query: 559 VDCLPRRRQSLLFSATMPKEL--------------VLKREHTYIDTVGLGSVETPVKIKQ 604
+D P +Q++LFSATMPK++ ++ E +DT+ +ET + K
Sbjct: 173 LDETPDSKQTMLFSATMPKDIKKLAKRYMEEPQMIQVQSEEVTVDTIEQRVIETTDRAK- 231
Query: 605 SCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSR 664
P L F + + ++FC T + S LY L+ + N E++
Sbjct: 232 -----PDALRFVMDRD---------QPFLAVIFCRTKVRVSKLYDNLKGLGYNCAELHGD 277
Query: 665 KPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGR 724
PQ R+R+ + FR +K L+ +DV+ARG+D VT V IP D E YIHR+GRTGR
Sbjct: 278 IPQAKRERVMKSFREAKIQYLIATDVAARGLDVDGVTHVFNFDIPEDVESYIHRIGRTGR 337
Query: 725 EGKEGEGVLLLAPWEEYFLDDLK 747
G G + +A +E L++++
Sbjct: 338 AGGSGLAITFVAAKDEKHLEEIE 360
>gi|340375419|ref|XP_003386232.1| PREDICTED: ATP-dependent RNA helicase DDX18 [Amphimedon
queenslandica]
Length = 505
Score = 220 bits (560), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 148/423 (34%), Positives = 234/423 (55%), Gaps = 33/423 (7%)
Query: 386 ISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKAT 445
+S T+KA+ G+ M +Q ++ LEG+D + A+TG+GK++AFL+PA+E + K
Sbjct: 24 VSDKTLKAIEEMGFTDMMEIQYKSIRPLLEGRDLLGAARTGSGKTLAFLVPAVELLYK-- 81
Query: 446 SSSTTQLVP--PIYVLILCPTRELASQIAAEAIALLKNHD---GIGVLTLVGGTRFKVDQ 500
+P ++I+ PTREL+ Q LL+ H+ GI ++GG +V+
Sbjct: 82 ----LNFLPRNGTGIIIISPTRELSLQTYGVVTELLQYHNHSHGI----IMGGANRRVEV 133
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
RLE +LVATPGRLLDH++N G + L+ L++DEAD +L++GF ++++ I+
Sbjct: 134 ERLEKG-VNLLVATPGRLLDHLQNTKGFVYQ--NLQCLIIDEADRILEIGFEEEMKQIIK 190
Query: 561 CLPRRRQSLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELH 614
LP++RQ++LFSAT K+ + LK+ Y+ T ++Q +V P E
Sbjct: 191 ILPKKRQTVLFSATQTKKTEDLARVSLKKAPLYVGVDDDKMTSTVEGLEQGYVVCPSEKR 250
Query: 615 FQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRIS 674
F +L LK ++ D KV+VF S+ LL + + V ++Y R+ Q R
Sbjct: 251 FLLLFAFLKRNL----DKKVMVFFSSCNSVKFHSELLNYIDIPVLDIYGRQKQQKRTSTF 306
Query: 675 EEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLL 734
EF S++ IL+ +DV+ARG+D P+V ++Q P D ++YIHR+GRT R G G+ +L
Sbjct: 307 FEFCQSEKCILLCTDVAARGLDIPEVDWIIQYDPPDDPKEYIHRVGRTARAGARGKALLF 366
Query: 735 LAPWEEYFLDDLKD--LPLDKLQL-PHLNPEIQLQMDNHMAKIDNNVKEA--AYHAWLGY 789
L P E FL LK +PL++ + P IQ Q+++ M K K A Y ++L
Sbjct: 367 LLPEELSFLCYLKQAKVPLNEYEFAPGKLSNIQTQLEHLMEKNYYLHKSARDGYRSYLQA 426
Query: 790 YNS 792
Y S
Sbjct: 427 YAS 429
>gi|423655270|ref|ZP_17630569.1| hypothetical protein IKG_02258 [Bacillus cereus VD200]
gi|401293332|gb|EJR98976.1| hypothetical protein IKG_02258 [Bacillus cereus VD200]
Length = 454
Score = 220 bits (560), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 138/383 (36%), Positives = 202/383 (52%), Gaps = 41/383 (10%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
K F E GIS L G + T +QE + L GKD + +AKTGTGK++AF+LP +
Sbjct: 5 KNFLELGISETFNHTLRENGITEATPIQEKAIPVILSGKDIIGQAKTGTGKTLAFVLPIL 64
Query: 439 EAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
E + A+S + LI+ PTRELA QI E +L + I VL + GG
Sbjct: 65 EKIDPASSD--------VQALIVAPTRELALQITTEIKKMLVQREDINVLAIYGGQDVAQ 116
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
R+L+ + I+VATPGRLLDHI ++ + L L +VLDEAD +L GF D+E+I
Sbjct: 117 QLRKLKGN-THIVVATPGRLLDHIRRET---IDLSNLSTIVLDEADQMLYFGFLYDIEDI 172
Query: 559 VDCLPRRRQSLLFSATMPKEL--------------VLKREHTYIDTVGLGSVETPVKIKQ 604
+D P +Q++LFSATMPK++ ++ E +DT+ +ET + K
Sbjct: 173 LDETPGSKQTMLFSATMPKDIKKLAKRYMDEPQMIQVQSEEVTVDTIEQRVIETTDRAK- 231
Query: 605 SCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSR 664
P L F + + ++FC T + S LY L+ + N E++
Sbjct: 232 -----PDALRFVMDRD---------QPFLAVIFCRTKVRASKLYDNLKGLGYNCAELHGD 277
Query: 665 KPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGR 724
PQ R+R+ + FR +K L+ +DV+ARG+D VT V IP D E YIHR+GRTGR
Sbjct: 278 IPQAKRERVMKSFREAKIQYLIATDVAARGLDVDGVTHVFNYDIPEDVESYIHRIGRTGR 337
Query: 725 EGKEGEGVLLLAPWEEYFLDDLK 747
G G + +A +E L++++
Sbjct: 338 AGGSGLAITFVAAKDEKHLEEIE 360
>gi|423482311|ref|ZP_17459001.1| hypothetical protein IEQ_02089 [Bacillus cereus BAG6X1-2]
gi|401143615|gb|EJQ51149.1| hypothetical protein IEQ_02089 [Bacillus cereus BAG6X1-2]
Length = 442
Score = 220 bits (560), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 137/383 (35%), Positives = 201/383 (52%), Gaps = 41/383 (10%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
K F E GIS L G + T +QE + L GKD + +AKTGTGK++AF+LP +
Sbjct: 5 KNFLELGISETFNHTLRENGITEATPIQEKAIPVILSGKDIIGQAKTGTGKTLAFVLPIL 64
Query: 439 EAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
E + +S + LI+ PTRELA QI E +L + I VL + GG
Sbjct: 65 EKIDPESSD--------VQALIVAPTRELALQITTEIKKMLVQREDINVLAIYGGQDVAQ 116
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
R+L+ + I+VATPGRLLDHI ++ + L L +VLDEAD +L GF D+E+I
Sbjct: 117 QLRKLKGN-THIVVATPGRLLDHIRRET---IDLSNLSTIVLDEADQMLYFGFLYDIEDI 172
Query: 559 VDCLPRRRQSLLFSATMPKEL--------------VLKREHTYIDTVGLGSVETPVKIKQ 604
+D P +Q++LFSATMPK++ ++ E +DT+ +ET + K
Sbjct: 173 LDETPDSKQTMLFSATMPKDIKKLAKRYMEEPQMIQVQSEEVTVDTIEQRVIETTDRAK- 231
Query: 605 SCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSR 664
P L F + + ++FC T + S LY L+ + N E++
Sbjct: 232 -----PDALRFVMDRD---------QPFLAVIFCRTKVRASKLYDNLKGLGYNCAELHGD 277
Query: 665 KPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGR 724
PQ R+R+ + FR +K L+ +DV+ARG+D VT V IP D E YIHR+GRTGR
Sbjct: 278 IPQAKRERVMKSFREAKIQYLIATDVAARGLDVDGVTHVFNYDIPEDVESYIHRIGRTGR 337
Query: 725 EGKEGEGVLLLAPWEEYFLDDLK 747
G G + +A +E L++++
Sbjct: 338 AGGSGLAITFVAAKDEKHLEEIE 360
>gi|423407759|ref|ZP_17384908.1| hypothetical protein ICY_02444 [Bacillus cereus BAG2X1-3]
gi|401659085|gb|EJS76574.1| hypothetical protein ICY_02444 [Bacillus cereus BAG2X1-3]
Length = 454
Score = 220 bits (560), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 137/383 (35%), Positives = 203/383 (53%), Gaps = 41/383 (10%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
K F E GIS + L G + T +QE + + GKD + +AKTGTGK++AF+LP +
Sbjct: 5 KNFLELGISEIFNHTLRENGITEATPIQEKAIPVIMSGKDIIGQAKTGTGKTLAFVLPIL 64
Query: 439 EAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
E + +S + LI+ PTRELA QI AE +L + I VL + GG
Sbjct: 65 EKIDSESSD--------VQALIVAPTRELALQITAEIKKMLVQREDINVLAIYGGQDVAQ 116
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
R+L+ + I+VATPGRLLDHI ++ + L L +VLDEAD +L GF D+E+I
Sbjct: 117 QLRKLKGN-THIVVATPGRLLDHIRRET---IDLSNLSTIVLDEADQMLYFGFLYDIEDI 172
Query: 559 VDCLPRRRQSLLFSATMPKEL--------------VLKREHTYIDTVGLGSVETPVKIKQ 604
+D P +Q++LFSATMPK++ ++ E +DT+ +ET + K
Sbjct: 173 LDETPGSKQTMLFSATMPKDIKKLAKRYMDEPQMIQVQSEEVTVDTIEQRVIETTDRAK- 231
Query: 605 SCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSR 664
P L F + + ++FC T + S LY L+ + N E++
Sbjct: 232 -----PDALRFVMDRD---------QPFLAVIFCRTKVRASKLYDNLKGLGYNCAELHGD 277
Query: 665 KPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGR 724
PQ R+R+ + FR +K L+ +DV+ARG+D VT V IP D E YIHR+GRTGR
Sbjct: 278 IPQAKRERVMKSFREAKIQYLIATDVAARGLDVDGVTHVFNFDIPEDVESYIHRIGRTGR 337
Query: 725 EGKEGEGVLLLAPWEEYFLDDLK 747
G G + +A +E L++++
Sbjct: 338 AGGSGLAITFVAAKDEKHLEEIE 360
>gi|228921162|ref|ZP_04084492.1| ATP-dependent RNA helicase [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|228838478|gb|EEM83789.1| ATP-dependent RNA helicase [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
Length = 458
Score = 220 bits (560), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 138/383 (36%), Positives = 202/383 (52%), Gaps = 41/383 (10%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
K F E GIS L G + T +QE + L GKD + +AKTGTGK++AF+LP +
Sbjct: 5 KNFLELGISETFNHTLRENGITEATPIQEKAIPVILSGKDIIGQAKTGTGKTLAFVLPIL 64
Query: 439 EAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
E + A+S + LI+ PTRELA QI E +L + I VL + GG
Sbjct: 65 EKIDPASSD--------VQALIVAPTRELALQITTEIKKMLVQREDINVLAIYGGQDVAQ 116
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
R+L+ + I+VATPGRLLDHI ++ + L L +VLDEAD +L GF D+E+I
Sbjct: 117 QLRKLKGN-THIVVATPGRLLDHIRRET---IDLSNLSTIVLDEADQMLYFGFLYDIEDI 172
Query: 559 VDCLPRRRQSLLFSATMPKEL--------------VLKREHTYIDTVGLGSVETPVKIKQ 604
+D P +Q++LFSATMPK++ ++ E +DT+ +ET + K
Sbjct: 173 LDETPGSKQTMLFSATMPKDIKKLAKRYMDEPQMIQVQSEEVTVDTIEQRVIETTDRAK- 231
Query: 605 SCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSR 664
P L F + + ++FC T + S LY L+ + N E++
Sbjct: 232 -----PDALRFVMDRD---------QPFLAVIFCRTKLRVSKLYDNLKGLGYNCAELHGD 277
Query: 665 KPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGR 724
PQ R+R+ + FR +K L+ +DV+ARG+D VT V IP D E YIHR+GRTGR
Sbjct: 278 IPQAKRERVMKSFREAKIQYLIATDVAARGLDVDGVTHVFNFDIPEDVESYIHRIGRTGR 337
Query: 725 EGKEGEGVLLLAPWEEYFLDDLK 747
G G + +A +E L++++
Sbjct: 338 AGGSGLAITFVAAKDEKHLEEIE 360
>gi|33416833|gb|AAH55481.1| Ddx10 protein, partial [Mus musculus]
Length = 623
Score = 220 bits (560), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 153/462 (33%), Positives = 251/462 (54%), Gaps = 43/462 (9%)
Query: 380 RFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIE 439
RF + +S T+K L A Y +T +Q+ T+ L+GKD + AKTG+GK++AFL+P +E
Sbjct: 12 RFSDFPLSKKTLKGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLE 71
Query: 440 AVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVD 499
A+ + +ST L VLI+ PTRELA Q + KNHD L ++GG K +
Sbjct: 72 ALYRLQWTSTDGL----GVLIISPTRELAYQTFEVLRKVGKNHDFSAGL-IIGGKDLKHE 126
Query: 500 QRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIV 559
R+ + ILV TPGRLL H++ + L+MLVLDEAD +LD+GF + I+
Sbjct: 127 AERINN--INILVCTPGRLLQHMDE--TICFHATNLQMLVLDEADRILDMGFADTMNAII 182
Query: 560 DCLPRRRQSLLFSATMPKEL-----VLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELH 614
+ LP++RQ+LLFSAT K + + ++ Y+ TP ++Q+ ++
Sbjct: 183 ENLPKKRQTLLFSATQTKSVKDLARLSLKDPEYVWVHEKAKYSTPATLEQNYIICELHQK 242
Query: 615 FQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK--MNVREMYSRKPQLYRDR 672
+L L+ H+ K IVF S+ LY + ++ +++ ++ R+ Q+ R
Sbjct: 243 ISVLFSFLRSHL----KKKSIVFFSSCKEVQYLYRVFCRLRPGISILALHGRQQQMRRME 298
Query: 673 ISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGV 732
+ EF + +L +D++ARG+D+P V V+Q P D YIHR GRT R ++GE +
Sbjct: 299 VYNEFVRKRAAVLFATDIAARGLDFPAVNWVLQFDCPEDANTYIHRAGRTARYKEDGEAL 358
Query: 733 LLLAPWEEY-FLDDL--KDLPLDKLQLPHLNPE----IQLQMDNHMAKIDNNVKEAAYHA 785
L+L P EE + L K +P+ +++ +NPE +Q ++++ +A+ D ++KE A
Sbjct: 359 LILLPSEEQGMVQQLLQKKVPVKEIK---INPEKLIDVQKKLESFLAQ-DQDLKERAQRC 414
Query: 786 WLGYYNSIREIGRDKTTLVELAN-------KFAQSIGLQRPP 820
++ Y S+ + +DK E+ N ++A S+GL P
Sbjct: 415 FVSYIRSVY-LMKDK----EVFNVSKLPITEYALSLGLAVAP 451
>gi|145240499|ref|XP_001392896.1| ATP-dependent RNA helicase dbp4 [Aspergillus niger CBS 513.88]
gi|134034071|sp|A2QS00.1|DBP4_ASPNC RecName: Full=ATP-dependent RNA helicase dbp4
gi|134077418|emb|CAK45672.1| unnamed protein product [Aspergillus niger]
Length = 802
Score = 220 bits (560), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 154/458 (33%), Positives = 244/458 (53%), Gaps = 33/458 (7%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
++F + +S T L ++ Y +T +Q +S L+G+D + AKTG+GK++AFL+P +
Sbjct: 47 EQFTDLPLSEPTASGLASSHYKTLTDIQSRAISHALKGRDILGAAKTGSGKTLAFLIPIL 106
Query: 439 EAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
E + + S L L+L PTRELA QI E + + + ++GG +
Sbjct: 107 ENLYRKQWSEHDGL----GALVLSPTRELAIQIF-EVLRKVGRYHTFSAGLVIGGKSLRE 161
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
+Q RL ILV TPGR+L H++ S L+MLVLDEAD +LD+GF+K V+ I
Sbjct: 162 EQERLGR--MNILVCTPGRMLQHLDQTSFFETH--NLQMLVLDEADRILDMGFQKTVDAI 217
Query: 559 VDCLPRRRQSLLFSATMPKEL-----VLKREHTYIDTVGLGSVETPVKIKQSCLVAPHEL 613
+ LP+ RQ+LLFSAT K++ + ++ Y+ S TP K++Q +V P
Sbjct: 218 IGHLPKERQTLLFSATQTKKVSDLARLSLQDPEYVAVHEAASSATPSKLQQHYVVTPLPQ 277
Query: 614 HFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNV--REMYSRKPQLYRD 671
+L ++ ++ K IVF S+G +Y R M+ V ++ R+ Q R
Sbjct: 278 KLDVLWSFIRSNLKS----KTIVFLSSGKQVRFVYESFRHMQPGVPLMHLHGRQKQGGRL 333
Query: 672 RISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEG 731
I+ +F +++ +L +DV+ARG+D+P V V+Q+ P D + YIHR+GRT R ++G
Sbjct: 334 DITTKFSSAQHAVLFATDVAARGLDFPAVDWVIQLDCPEDADTYIHRVGRTARYERDGRA 393
Query: 732 VLLLAPWEEYFLDDLKDLPLDKLQLPHLN------PEIQLQMDNHMAKIDNNVKEAAYHA 785
VL L P EE + LK L K+Q+ +N I+ Q+ N M D +K A
Sbjct: 394 VLFLDPSEEKGM--LKRLEQKKVQVERINVKANKQQSIKDQLQN-MCFKDPELKYLGQKA 450
Query: 786 WLGYYNSIREIGRDKT--TLVELA-NKFAQSIGLQRPP 820
++ Y S+ + +DK + EL ++FA S+GL P
Sbjct: 451 FISYAKSVY-VQKDKEIFNIKELKLDEFAGSLGLPGAP 487
>gi|350629917|gb|EHA18290.1| hypothetical protein ASPNIDRAFT_38107 [Aspergillus niger ATCC 1015]
Length = 802
Score = 220 bits (560), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 154/458 (33%), Positives = 244/458 (53%), Gaps = 33/458 (7%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
++F + +S T L ++ Y +T +Q +S L+G+D + AKTG+GK++AFL+P +
Sbjct: 47 EQFTDLPLSEPTASGLASSHYKTLTDIQSRAISHALKGRDILGAAKTGSGKTLAFLIPIL 106
Query: 439 EAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
E + + S L L+L PTRELA QI E + + + ++GG +
Sbjct: 107 ENLYRKQWSEHDGL----GALVLSPTRELAIQIF-EVLRKVGRYHTFSAGLVIGGKSLRE 161
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
+Q RL ILV TPGR+L H++ S L+MLVLDEAD +LD+GF+K V+ I
Sbjct: 162 EQERLGR--MNILVCTPGRMLQHLDQTSFFETH--NLQMLVLDEADRILDMGFQKTVDAI 217
Query: 559 VDCLPRRRQSLLFSATMPKEL-----VLKREHTYIDTVGLGSVETPVKIKQSCLVAPHEL 613
+ LP+ RQ+LLFSAT K++ + ++ Y+ S TP K++Q +V P
Sbjct: 218 IGHLPKERQTLLFSATQTKKVSDLARLSLQDPEYVAVHEAASSATPSKLQQHYVVTPLPQ 277
Query: 614 HFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNV--REMYSRKPQLYRD 671
+L ++ ++ K IVF S+G +Y R M+ V ++ R+ Q R
Sbjct: 278 KLDVLWSFIRSNLKS----KTIVFLSSGKQVRFVYESFRHMQPGVPLMHLHGRQKQGGRL 333
Query: 672 RISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEG 731
I+ +F +++ +L +DV+ARG+D+P V V+Q+ P D + YIHR+GRT R ++G
Sbjct: 334 DITTKFSSAQHAVLFATDVAARGLDFPAVDWVIQLDCPEDADTYIHRVGRTARYERDGRA 393
Query: 732 VLLLAPWEEYFLDDLKDLPLDKLQLPHLN------PEIQLQMDNHMAKIDNNVKEAAYHA 785
VL L P EE + LK L K+Q+ +N I+ Q+ N M D +K A
Sbjct: 394 VLFLDPSEEKGM--LKRLEQKKVQVERINVKANKQQSIKDQLQN-MCFKDPELKYLGQKA 450
Query: 786 WLGYYNSIREIGRDKT--TLVELA-NKFAQSIGLQRPP 820
++ Y S+ + +DK + EL ++FA S+GL P
Sbjct: 451 FISYAKSVY-VQKDKEIFNIKELKLDEFAGSLGLPGAP 487
>gi|323354469|gb|EGA86308.1| Hca4p [Saccharomyces cerevisiae VL3]
Length = 770
Score = 220 bits (560), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 164/490 (33%), Positives = 254/490 (51%), Gaps = 44/490 (8%)
Query: 375 ILSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFL 434
I K F + IS T+K L + +I++T +Q ++ L+G D + AKTG+GK++AFL
Sbjct: 37 ITKAKFFKDLPISDPTLKGLRESSFIKLTEIQADSIPVSLQGHDVLAAAKTGSGKTLAFL 96
Query: 435 LPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGT 494
+P IE + + + L LI+ PTRELA QI E + + +H ++GG
Sbjct: 97 VPVIEKLYREKWTEFDGL----GALIISPTRELAMQIY-EVLTKIGSHTSFSAGLVIGGK 151
Query: 495 RFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKD 554
K + R+ IL+ TPGR+L H++ GL+ L+MLVLDEAD LD+GF+K
Sbjct: 152 DVKFELERISR--INILIGTPGRILQHLDQAVGLNTS--NLQMLVLDEADRCLDMGFKKT 207
Query: 555 VENIVDCLPRRRQSLLFSATMPKEL--VLKREHTYIDTVGL-----GSV----ETPVKIK 603
++ IV L RQ+LLFSAT + + + + T TVG GSV TP ++
Sbjct: 208 LDAIVSTLSPSRQTLLFSATQSQSVADLARLSLTDYKTVGTHDVMDGSVNKEASTPETLQ 267
Query: 604 QSCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK--MNVREM 661
Q + P IL +K H+ K+IVF S+ +Y R+M+ +++ +
Sbjct: 268 QFYIEVPLADKLDILFSFIKSHL----KCKMIVFLSSSKQVHFVYETFRKMQPGISLMHL 323
Query: 662 YSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGR 721
+ R+ Q R ++F ++++ L +DV ARG+D+P V VVQV P D + YIHR+GR
Sbjct: 324 HGRQKQRARTETLDKFNRAQQVCLFATDVVARGIDFPAVDWVVQVDCPEDVDTYIHRVGR 383
Query: 722 TGREGKEGEGVLLLAPWEEYFLDDLKDLPLDKLQLPHLNPEIQL------QMDNHMAKID 775
R GK+G+ +++L P E+ LK L K++ LN + Q+ + + K D
Sbjct: 384 CARYGKKGKSLIMLTPQEQEAF--LKRLNARKIEPGKLNIKQSKKKSIKPQLQSLLFK-D 440
Query: 776 NNVKEAAYHAWLGYYNSIREIGRDKTTLV--EL-ANKFAQSIGLQRPPPLFRKTALKMGL 832
+K A++ Y SI + +DK EL +FA S+GL PP + K G+
Sbjct: 441 PELKYLGQKAFISYVRSIY-VQKDKQVFKFDELPTEEFAYSLGLPGPPKIKMK-----GM 494
Query: 833 KDIPGIRLRK 842
K I + RK
Sbjct: 495 KTIEQAKERK 504
>gi|423419525|ref|ZP_17396614.1| hypothetical protein IE3_02997 [Bacillus cereus BAG3X2-1]
gi|401106131|gb|EJQ14098.1| hypothetical protein IE3_02997 [Bacillus cereus BAG3X2-1]
Length = 450
Score = 220 bits (560), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 136/383 (35%), Positives = 201/383 (52%), Gaps = 41/383 (10%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
K F E GIS L G + T +QE + + GKD + +AKTGTGK++AF+LP +
Sbjct: 5 KNFLELGISETFNHTLRENGITEATPIQEKAIPVIMSGKDIIGQAKTGTGKTLAFVLPIL 64
Query: 439 EAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
E + +S + LI+ PTRELA QI E +L + I VL + GG
Sbjct: 65 EKINPESSD--------VQALIVAPTRELALQITTEIKKMLVQREDINVLAIYGGQDVAQ 116
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
R+L+ + I+VATPGRLLDHI ++ + L L +VLDEAD +L GF D+E+I
Sbjct: 117 QLRKLKGN-THIVVATPGRLLDHIRRET---IDLSNLSTIVLDEADQMLYFGFLYDIEDI 172
Query: 559 VDCLPRRRQSLLFSATMPKEL--------------VLKREHTYIDTVGLGSVETPVKIKQ 604
+D P +Q++LFSATMPK++ ++ E +DT+ +ET + K
Sbjct: 173 LDETPGSKQTMLFSATMPKDIKKLAKRYMDEPQMIQVQSEEVTVDTIEQRVIETTDRAK- 231
Query: 605 SCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSR 664
P L F + + ++FC T + S LY L+ + N E++
Sbjct: 232 -----PDALRFVMDRD---------QPFLAVIFCRTKVRASKLYDNLKGLGYNCAELHGD 277
Query: 665 KPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGR 724
PQ R+R+ + FR +K L+ +DV+ARG+D VT V IP D E YIHR+GRTGR
Sbjct: 278 IPQAKRERVMKSFREAKIQYLIATDVAARGLDVDGVTHVFNFDIPEDVESYIHRIGRTGR 337
Query: 725 EGKEGEGVLLLAPWEEYFLDDLK 747
G G + +A +E L++++
Sbjct: 338 AGGSGLAITFVAAKDEKHLEEIE 360
>gi|50290649|ref|XP_447757.1| hypothetical protein [Candida glabrata CBS 138]
gi|74609416|sp|Q6FPT7.1|DBP4_CANGA RecName: Full=ATP-dependent RNA helicase DBP4
gi|49527068|emb|CAG60704.1| unnamed protein product [Candida glabrata]
Length = 765
Score = 220 bits (560), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 149/455 (32%), Positives = 241/455 (52%), Gaps = 30/455 (6%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F + IS T+K L A +I+MT +Q ++ L+G D AKTG+GK++AFL+P +E
Sbjct: 43 FKDLPISKSTLKGLNEASFIKMTDIQRDSIVTSLQGHDVFGTAKTGSGKTLAFLVPVLEK 102
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+ + + L LI+ PTRELA QI E + + +H ++GG +
Sbjct: 103 LYRERWTEFDGLG----ALIISPTRELAMQIY-EVLVKIGSHTQFSAGLVIGGKDVNFEL 157
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
R+ IL+ TPGR+L H++ GL+ L+MLVLDEAD LD+GF+K ++ IV
Sbjct: 158 ERIAK--INILIGTPGRILQHMDQAVGLNTS--NLQMLVLDEADRCLDMGFQKTLDAIVG 213
Query: 561 CLPRRRQSLLFSATMPKELVLKREHTYIDTVGLGSVE-------TPVKIKQSCLVAPHEL 613
LP RQ+LLFSAT + + + D +G+++ TP ++QS ++A
Sbjct: 214 NLPPDRQTLLFSATQSQSISDLARLSLTDYKKIGTIDSSEDGPATPKTLQQSYIIADLAD 273
Query: 614 HFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK--MNVREMYSRKPQLYRD 671
+L+ +K H+ K+IVF S+ +Y R+M+ +++ ++ R+ Q R
Sbjct: 274 KLDVLYSFIKSHL----KTKMIVFFSSSKQVHFVYETFRKMQPGISLLHLHGRQKQRART 329
Query: 672 RISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEG 731
++F ++++ L +DV ARG+D+P V V+QV P D + YIHR+GR R GK+G
Sbjct: 330 ETLDKFFRAQQVCLFATDVVARGIDFPAVDWVIQVDCPEDVDTYIHRVGRAARYGKKGRS 389
Query: 732 VLLLAPWEEYFLDDLKDLPLDKLQLPHLNPEIQL---QMDNHMAKIDNNVKEAAYHAWLG 788
+++L P EE FL + ++ +L + + Q+ + + K D +K A++
Sbjct: 390 LIILTPQEEAFLTRMAAKKIEPGKLTIKQSKKKSIKPQLQSLLFK-DPELKYLGQKAFIS 448
Query: 789 YYNSIREIGRDKTTLV--EL-ANKFAQSIGLQRPP 820
Y SI I +DK EL +FA S+GL P
Sbjct: 449 YVKSIY-IQKDKEVFKFDELPTEEFANSLGLPGAP 482
>gi|242022035|ref|XP_002431447.1| DEAD box ATP-dependent RNA helicase, putative [Pediculus humanus
corporis]
gi|212516735|gb|EEB18709.1| DEAD box ATP-dependent RNA helicase, putative [Pediculus humanus
corporis]
Length = 636
Score = 219 bits (559), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 160/465 (34%), Positives = 254/465 (54%), Gaps = 37/465 (7%)
Query: 375 ILSQKRFD--ECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIA 432
ILS +F E + T+KA+ G+ MT +Q ++ LEG+D V AKTG+GK++A
Sbjct: 137 ILSDTKFSSLEGKVCENTLKAIVDMGFTTMTEIQAKSIPPLLEGRDLVGSAKTGSGKTLA 196
Query: 433 FLLPAIEAVLKATSSSTTQLVP--PIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTL 490
FL+P +E + K + +P + +I+ PTREL+ Q L+K H L +
Sbjct: 197 FLIPVVELIYKL------KFLPRNGVGAIIISPTRELSMQTFGVLKELMKYHYHTYGL-V 249
Query: 491 VGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLG 550
+GG K + +L S ILVATPGRLLDH++N G + L+ LV+DEAD +LD+G
Sbjct: 250 IGGANRKAEAEKL-SKGINILVATPGRLLDHLQNTPGFLFK--NLQCLVIDEADRILDIG 306
Query: 551 FRKDVENIVDCLPRRRQSLLFSATMP------KELVLKREHTYIDTVGLGSVETPVKIKQ 604
F ++++ I++ LP+RRQ++LFSAT +L LK+E Y+ T ++Q
Sbjct: 307 FEEELKQIINLLPKRRQTMLFSATTTAKTENLTKLALKKEPVYVGIDDRKEKATVEGLEQ 366
Query: 605 SCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSR 664
+V P E F +L LK+ KV+VF S+ + + LL + + V ++ +
Sbjct: 367 GYVVCPSEKRFLLLFTFLKK----NKKKKVMVFFSSCLSVKFHHELLNYIDLPVMCIHGK 422
Query: 665 KPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGR 724
+ Q R + +F ++ IL+ +DV+ARG+D P V +VQ P D ++YIHR+GRT R
Sbjct: 423 QKQAKRTTVFFQFCNAESGILLCTDVAARGLDIPAVDWIVQYDPPDDPKEYIHRVGRTAR 482
Query: 725 -EGKEGEGVLLLAPWEEYFLDDLKD--LPLDKLQLPHLN-PEIQLQMDNHMAK---IDNN 777
EG G +L+L P E FL LK +PL++ + +IQ+Q++ + K ++ +
Sbjct: 483 GEGSSGHALLILRPEELGFLRYLKQARVPLNEFEFSWSKIADIQVQLEKLIGKNYFLNLS 542
Query: 778 VKEAAYHAWLGYYNS--IREIGRDKTTLVELANKFAQSIGLQRPP 820
KE A+ +++ Y+S ++ I T +E K A S G PP
Sbjct: 543 AKE-AFKSYVRAYDSHHLKNIFDVNTLDLE---KVATSFGFTVPP 583
>gi|423454088|ref|ZP_17430941.1| hypothetical protein IEE_02832 [Bacillus cereus BAG5X1-1]
gi|401137058|gb|EJQ44642.1| hypothetical protein IEE_02832 [Bacillus cereus BAG5X1-1]
Length = 450
Score = 219 bits (559), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 136/383 (35%), Positives = 201/383 (52%), Gaps = 41/383 (10%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
K F E GIS L G + T +QE + + GKD + +AKTGTGK++AF+LP +
Sbjct: 5 KNFLELGISETFNHTLRENGITEATPIQEKAIPVIMSGKDIIGQAKTGTGKTLAFVLPIL 64
Query: 439 EAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
E + +S + LI+ PTRELA QI E +L + I VL + GG
Sbjct: 65 EKIDPESSD--------VQALIVAPTRELALQITTEIKKMLVQREDINVLAIYGGQDVAQ 116
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
R+L+ + I+VATPGRLLDHI ++ + L L +VLDEAD +L GF D+E+I
Sbjct: 117 QLRKLKGN-THIVVATPGRLLDHIRRET---IDLSNLSTIVLDEADQMLYFGFLYDIEDI 172
Query: 559 VDCLPRRRQSLLFSATMPKEL--------------VLKREHTYIDTVGLGSVETPVKIKQ 604
+D P +Q++LFSATMPK++ ++ E +DT+ +ET + K
Sbjct: 173 LDETPDSKQTMLFSATMPKDIKKLAKRYMDEPQMIQVQSEEVTVDTIEQRVIETTDRAK- 231
Query: 605 SCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSR 664
P L F + + ++FC T + S LY L+ + N E++
Sbjct: 232 -----PDALRFVMDRD---------QPFLAVIFCRTKVRVSKLYDNLKGLGYNCAELHGD 277
Query: 665 KPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGR 724
PQ R+R+ + FR +K L+ +DV+ARG+D VT V IP D E YIHR+GRTGR
Sbjct: 278 IPQAKRERVMKSFREAKIQYLIATDVAARGLDVDGVTHVFNFDIPEDVESYIHRIGRTGR 337
Query: 725 EGKEGEGVLLLAPWEEYFLDDLK 747
G G + +A +E L++++
Sbjct: 338 AGGSGLAITFVAAKDEKHLEEIE 360
>gi|229017793|ref|ZP_04174677.1| ATP-dependent RNA helicase [Bacillus cereus AH1273]
gi|229024016|ref|ZP_04180493.1| ATP-dependent RNA helicase [Bacillus cereus AH1272]
gi|228737285|gb|EEL87803.1| ATP-dependent RNA helicase [Bacillus cereus AH1272]
gi|228743484|gb|EEL93600.1| ATP-dependent RNA helicase [Bacillus cereus AH1273]
Length = 450
Score = 219 bits (559), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 136/383 (35%), Positives = 201/383 (52%), Gaps = 41/383 (10%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
K F E GIS L G + T +QE + + GKD + +AKTGTGK++AF+LP +
Sbjct: 5 KNFLELGISETFNHTLRENGITEATPIQEKAIPVIMSGKDIIGQAKTGTGKTLAFVLPIL 64
Query: 439 EAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
E + +S + LI+ PTRELA QI E +L + I VL + GG
Sbjct: 65 EKIDPESSD--------VQALIVAPTRELALQITTEIKKMLVQREDINVLAIYGGQDVAQ 116
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
R+L+ + I+VATPGRLLDHI ++ + L L +VLDEAD +L GF D+E+I
Sbjct: 117 QLRKLKGN-THIVVATPGRLLDHIRRET---IDLSNLSTIVLDEADQMLYFGFLYDIEDI 172
Query: 559 VDCLPRRRQSLLFSATMPKEL--------------VLKREHTYIDTVGLGSVETPVKIKQ 604
+D P +Q++LFSATMPK++ ++ E +DT+ +ET + K
Sbjct: 173 LDETPASKQTMLFSATMPKDIKKLAKRYMDEPQMIQVQSEEVTVDTIEQRVIETTDRAK- 231
Query: 605 SCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSR 664
P L F + + ++FC T + S LY L+ + N E++
Sbjct: 232 -----PDALRFVMDRD---------QPFLAVIFCRTKVRASKLYDNLKGLGYNCAELHGD 277
Query: 665 KPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGR 724
PQ R+R+ + FR +K L+ +DV+ARG+D VT V IP D E YIHR+GRTGR
Sbjct: 278 IPQAKRERVMKSFREAKIQYLIATDVAARGLDVDGVTHVFNFDIPEDVESYIHRIGRTGR 337
Query: 725 EGKEGEGVLLLAPWEEYFLDDLK 747
G G + +A +E L++++
Sbjct: 338 AGGSGLAITFVAAKDEKHLEEIE 360
>gi|423510423|ref|ZP_17486954.1| hypothetical protein IG3_01920 [Bacillus cereus HuA2-1]
gi|402454013|gb|EJV85807.1| hypothetical protein IG3_01920 [Bacillus cereus HuA2-1]
Length = 450
Score = 219 bits (559), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 136/383 (35%), Positives = 201/383 (52%), Gaps = 41/383 (10%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
K F E GIS L G + T +QE + + GKD + +AKTGTGK++AF+LP +
Sbjct: 5 KNFLELGISETFNHTLRENGITEATPIQEKAIPVIMSGKDIIGQAKTGTGKTLAFVLPIL 64
Query: 439 EAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
E + +S + LI+ PTRELA QI E +L + I VL + GG
Sbjct: 65 EKIDPESSD--------VQALIVAPTRELALQITTEIKKMLVQREDINVLAIYGGQDVAQ 116
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
R+L+ + I+VATPGRLLDHI ++ + L L +VLDEAD +L GF D+E+I
Sbjct: 117 QLRKLKGN-THIVVATPGRLLDHIRRET---IDLSNLSTIVLDEADQMLYFGFLYDIEDI 172
Query: 559 VDCLPRRRQSLLFSATMPKEL--------------VLKREHTYIDTVGLGSVETPVKIKQ 604
+D P +Q++LFSATMPK++ ++ E +DT+ +ET + K
Sbjct: 173 LDETPDSKQTMLFSATMPKDIKKLAKRYMEEPQMIQVQSEEVTVDTIEQRVIETTDRAK- 231
Query: 605 SCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSR 664
P L F + + ++FC T + S LY L+ + N E++
Sbjct: 232 -----PDALRFVMDRD---------QPFLAVIFCRTKVRVSKLYDNLKGLGYNCAELHGD 277
Query: 665 KPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGR 724
PQ R+R+ + FR +K L+ +DV+ARG+D VT V IP D E YIHR+GRTGR
Sbjct: 278 IPQAKRERVMKSFREAKIQYLIATDVAARGLDVDGVTHVFNFDIPEDVESYIHRIGRTGR 337
Query: 725 EGKEGEGVLLLAPWEEYFLDDLK 747
G G + +A +E L++++
Sbjct: 338 AGGSGLAITFVAAKDEKHLEEIE 360
>gi|376260079|ref|YP_005146799.1| DNA/RNA helicase [Clostridium sp. BNL1100]
gi|373944073|gb|AEY64994.1| DNA/RNA helicase, superfamily II [Clostridium sp. BNL1100]
Length = 564
Score = 219 bits (559), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 145/452 (32%), Positives = 237/452 (52%), Gaps = 32/452 (7%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F + +S +A+ G+ + T +Q ++ LEG D + +A+TGTGK+ AF +PA+E
Sbjct: 6 FKDLTLSDEVQRAIVDMGFEEATPIQSQSIPYILEGNDLIGQAQTGTGKTCAFGIPAVEK 65
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+ S I VL+LCPTRELA Q E +LK DGI +L + GG
Sbjct: 66 IDPQIDS--------IQVLVLCPTRELAIQSCEELRNVLKYKDGIRILPVYGGQPIDRQI 117
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
L+ P QI++ TPGR++DH+ ++ ++L LKM+VLDEAD +L++GFR+D++ I++
Sbjct: 118 MALKKRP-QIIIGTPGRVMDHMRRRT---LKLEALKMIVLDEADEMLNMGFREDIDTILE 173
Query: 561 CLPRRRQSLLFSATMPKELVLKREHTYIDTVGLGSVE---TPVKIKQSCLVAPHELHFQI 617
+P RQ++LFSATMPKE++ + D V + T I+Q L ++
Sbjct: 174 KVPEDRQTILFSATMPKEILELTKKYQKDPVHIKIAHKELTVPSIEQYYLEVKESAKLEV 233
Query: 618 LHHLLKEHILGTPDYKV-IVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEE 676
L L+ T D K+ +VFC+T L L+ + ++ Q +RD++
Sbjct: 234 LSRLID-----TNDIKLSLVFCNTKKRVDELTASLQSRGFSAEALHGDMRQEHRDKVMSL 288
Query: 677 FRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLA 736
FR IL+ +DV+ARG+D DV +V +P D E Y+HR+GRTGR G+ G+ ++
Sbjct: 289 FRKGNFDILIATDVAARGIDVDDVEAVFNYDLPNDEEYYVHRIGRTGRAGRTGKAFTFIS 348
Query: 737 PWEEYFLDDLKDL---PLDKLQLPHLNPEIQLQMDNHMAKIDNNVKEAAYHAWLGYY--- 790
E Y L D++ + ++ P LN + +M N + + N+K+ + ++ +
Sbjct: 349 GREMYKLRDIQRYTKSTIVPMKPPSLNEVEEKKMLNILKTLKENLKDESISKFVSHIERF 408
Query: 791 -----NSIREIGRDKTTLVELANKFAQSIGLQ 817
N E G + T +++A + G Q
Sbjct: 409 IDTINNESEEQGENFVTSLDIAAALLKMYGEQ 440
>gi|326204124|ref|ZP_08193984.1| DEAD/DEAH box helicase domain protein [Clostridium papyrosolvens
DSM 2782]
gi|325985635|gb|EGD46471.1| DEAD/DEAH box helicase domain protein [Clostridium papyrosolvens
DSM 2782]
Length = 564
Score = 219 bits (559), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 146/452 (32%), Positives = 237/452 (52%), Gaps = 32/452 (7%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F + +S A+ G+ + T +Q ++ LEG D + +A+TGTGK+ AF +PA+E
Sbjct: 6 FKDLTLSDEVQHAIADMGFEEATPIQSQSIPYILEGNDLIGQAQTGTGKTCAFGIPAVEK 65
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+ S I VL+LCPTRELA Q E +LK DGI +L + GG
Sbjct: 66 IDSHIDS--------IQVLVLCPTRELAIQSCEELRNVLKYKDGIRILPVYGGQPIDRQI 117
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
L+ P QI++ TPGR++DH+ K+ ++L LKM+VLDEAD +L++GFR+D++ I++
Sbjct: 118 MALKKRP-QIIIGTPGRVMDHMRRKT---LKLESLKMIVLDEADEMLNMGFREDIDTILE 173
Query: 561 CLPRRRQSLLFSATMPKELVLKREHTYIDTVGLGSVE---TPVKIKQSCLVAPHELHFQI 617
+P RQ++LFSATMPKE++ + D V + T I+Q L ++
Sbjct: 174 KVPEDRQTILFSATMPKEILELTKKYQKDPVHIKIAHKELTVPSIEQYYLEVKESAKLEV 233
Query: 618 LHHLLKEHILGTPDYKV-IVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEE 676
L L+ T D K+ +VFC+T L L+ + ++ Q +RD++
Sbjct: 234 LSRLID-----TNDIKLSLVFCNTKKRVDELTASLQSRGFSAEALHGDMRQEHRDKVMSL 288
Query: 677 FRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLA 736
FR IL+ +DV+ARG+D DV +V +P D E Y+HR+GRTGR G+ G+ ++
Sbjct: 289 FRKGNFDILIATDVAARGIDVDDVEAVFNYDLPNDEEYYVHRIGRTGRAGRTGKAFTFIS 348
Query: 737 PWEEYFLDDLKDL---PLDKLQLPHLNPEIQLQMDNHMAKIDNNVKEAAYHAWLGYY--- 790
E Y L D++ + ++ P LN + +M N + + +N+K+ + ++ +
Sbjct: 349 GREMYKLRDIQRYTKSTIVAMKPPSLNEVEEKKMLNILKTLKDNLKDDSISKFVSHIERF 408
Query: 791 -----NSIREIGRDKTTLVELANKFAQSIGLQ 817
N E G + T +++A + G Q
Sbjct: 409 IDTINNESEEQGENFVTSLDVAAALLKMYGEQ 440
>gi|363756288|ref|XP_003648360.1| hypothetical protein Ecym_8261 [Eremothecium cymbalariae
DBVPG#7215]
gi|356891560|gb|AET41543.1| Hypothetical protein Ecym_8261 [Eremothecium cymbalariae
DBVPG#7215]
Length = 775
Score = 219 bits (559), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 151/464 (32%), Positives = 238/464 (51%), Gaps = 42/464 (9%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
FDE IS +T+K L +G+I++T +Q ++ L+G D + AKTG+GK++AFL+P IE
Sbjct: 43 FDELPISEVTLKGLKESGFIKLTDIQRDSIPMALKGHDILGAAKTGSGKTLAFLIPVIEK 102
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+ + + L LI+ PTRELA QI E + + H ++GG K +
Sbjct: 103 LYREKWTEFDGL----GALIISPTRELAMQIY-EVLIKIGKHTSFSAGLVIGGKDVKFEM 157
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
R+ IL+ TPGR+L H++ GL+ L++LVLDEAD LD+GF+K ++ IV
Sbjct: 158 DRISK--INILIGTPGRILQHMDQAVGLTSS--NLQILVLDEADRCLDMGFKKTLDAIVS 213
Query: 561 CLPRRRQSLLFSATMPKELVLKREHTYIDTVGLGS--------VETPVKIKQSCLVAPHE 612
LP RQ+LLFSAT + L + +D +GS TP ++QS +
Sbjct: 214 NLPPDRQTLLFSATQSQSLADLARLSLVDYKSIGSDTLLSKNQPATPETLEQSYIDVELP 273
Query: 613 LHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK--MNVREMYSRKPQLYR 670
IL +K H+ + K +VF S+ +Y R+++ +++ ++ R+ Q R
Sbjct: 274 DKLDILFSFIKSHL----NSKTVVFLSSSKQVHFVYETFRKLQPGISLMHLHGRQKQTAR 329
Query: 671 DRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGE 730
++F ++ L ++DV ARG+D+P V VVQV P D + YIHR GR+ R GK G+
Sbjct: 330 TETLDKFSRAQHACLFSTDVVARGIDFPTVDWVVQVDCPEDVDTYIHRAGRSARYGKSGK 389
Query: 731 GVLLLAPWEEYFLDDLKDLPLDKLQLPHLNPEIQLQMDNHMAKIDNNVK-------EAAY 783
+++L P EE L +L+ + P+ + + I N ++ E Y
Sbjct: 390 CLIMLTPQEEPGF-------LKRLKTKMIEPKKSVIKQSKRKSIRNQLQSLLFKSPELKY 442
Query: 784 HAWLGYYNSIREIGRDKTTLV----ELA-NKFAQSIGLQRPPPL 822
A + + +R I K T V EL +FA S+GL P +
Sbjct: 443 LAQKAFISYVRSIYIQKDTEVFKFSELPLEEFASSLGLPGAPKI 486
>gi|229011722|ref|ZP_04168904.1| ATP-dependent RNA helicase [Bacillus mycoides DSM 2048]
gi|229167295|ref|ZP_04295034.1| ATP-dependent RNA helicase [Bacillus cereus AH621]
gi|423487608|ref|ZP_17464290.1| hypothetical protein IEU_02231 [Bacillus cereus BtB2-4]
gi|423493331|ref|ZP_17469975.1| hypothetical protein IEW_02229 [Bacillus cereus CER057]
gi|423499877|ref|ZP_17476494.1| hypothetical protein IEY_03104 [Bacillus cereus CER074]
gi|423600206|ref|ZP_17576206.1| hypothetical protein III_03008 [Bacillus cereus VD078]
gi|423662694|ref|ZP_17637863.1| hypothetical protein IKM_03091 [Bacillus cereus VDM022]
gi|228616171|gb|EEK73257.1| ATP-dependent RNA helicase [Bacillus cereus AH621]
gi|228749519|gb|EEL99362.1| ATP-dependent RNA helicase [Bacillus mycoides DSM 2048]
gi|401153002|gb|EJQ60429.1| hypothetical protein IEW_02229 [Bacillus cereus CER057]
gi|401157135|gb|EJQ64537.1| hypothetical protein IEY_03104 [Bacillus cereus CER074]
gi|401233732|gb|EJR40220.1| hypothetical protein III_03008 [Bacillus cereus VD078]
gi|401297351|gb|EJS02962.1| hypothetical protein IKM_03091 [Bacillus cereus VDM022]
gi|402435673|gb|EJV67706.1| hypothetical protein IEU_02231 [Bacillus cereus BtB2-4]
Length = 450
Score = 219 bits (559), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 136/383 (35%), Positives = 201/383 (52%), Gaps = 41/383 (10%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
K F E GIS L G + T +QE + + GKD + +AKTGTGK++AF+LP +
Sbjct: 5 KNFLELGISETFNHTLRENGITEATPIQEKAIPVIMSGKDIIGQAKTGTGKTLAFVLPIL 64
Query: 439 EAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
E + +S + LI+ PTRELA QI E +L + I VL + GG
Sbjct: 65 EKIDPESSD--------VQALIVAPTRELALQITTEIKKMLVQREDINVLAIYGGQDVAQ 116
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
R+L+ + I+VATPGRLLDHI ++ + L L +VLDEAD +L GF D+E+I
Sbjct: 117 QLRKLKGN-THIVVATPGRLLDHIRRET---IDLSNLSTIVLDEADQMLYFGFLYDIEDI 172
Query: 559 VDCLPRRRQSLLFSATMPKEL--------------VLKREHTYIDTVGLGSVETPVKIKQ 604
+D P +Q++LFSATMPK++ ++ E +DT+ +ET + K
Sbjct: 173 LDETPDSKQTMLFSATMPKDIKKLAKRYMEEPQMIQVQSEEVTVDTIEQRVIETTDRAK- 231
Query: 605 SCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSR 664
P L F + + ++FC T + S LY L+ + N E++
Sbjct: 232 -----PDALRFVMDRD---------QPFLAVIFCRTKVRVSKLYDNLKGLGYNCAELHGD 277
Query: 665 KPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGR 724
PQ R+R+ + FR +K L+ +DV+ARG+D VT V IP D E YIHR+GRTGR
Sbjct: 278 IPQAKRERVMKSFREAKIQYLIATDVAARGLDVDGVTHVFNFDIPEDVESYIHRIGRTGR 337
Query: 725 EGKEGEGVLLLAPWEEYFLDDLK 747
G G + +A +E L++++
Sbjct: 338 AGGSGLAITFVAAKDEKHLEEIE 360
>gi|171847235|gb|AAI61473.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 18 [Xenopus (Silurana)
tropicalis]
Length = 640
Score = 219 bits (559), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 156/446 (34%), Positives = 245/446 (54%), Gaps = 31/446 (6%)
Query: 390 TIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSST 449
T++A+T G+ MT +Q + LEG+D + A+TG+GK++AFL+PAIE V K
Sbjct: 158 TLRAVTEMGFTHMTEIQHKAIRPLLEGRDVLAAARTGSGKTLAFLIPAIELVYK------ 211
Query: 450 TQLVP--PIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDP 507
+ +P VLIL PTRELA Q L+ +H L ++GG+ + ++L ++
Sbjct: 212 LKFMPRNGTGVLILSPTRELAMQTYGVLKELMAHHVHTFGL-IMGGSNRSAEAQKL-ANG 269
Query: 508 CQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQ 567
I+VATPGRLLDH++N G + L+ LV+DEAD +L++GF ++++ I++ LP+RRQ
Sbjct: 270 VNIVVATPGRLLDHMQNTPGFMYK--NLQCLVIDEADRILEVGFEQEMKQIINLLPKRRQ 327
Query: 568 SLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILHHL 621
++LFSAT ++ + LK+E Y+ T ++Q +V P E F +L
Sbjct: 328 TMLFSATQTRKVEDLARISLKKEPLYVGVDDHKETATVDGLEQGYVVCPSEKRFLLLFTF 387
Query: 622 LKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEFRASK 681
LK++ K++VF S+ M Y LL + + V ++ ++ Q R +F ++
Sbjct: 388 LKKN----RKKKMMVFFSSCMSVKYHYELLNYIDLPVMAIHGKQKQTKRTTTFFQFCNAE 443
Query: 682 RLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEG--VLLLAPWE 739
IL+ +DV+ARG+D P+V +VQ P D ++YIHR+GRT R G +G G +L+L P E
Sbjct: 444 SGILLCTDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTAR-GIDGRGHALLILRPEE 502
Query: 740 EYFLDDLKD--LPLDKLQLPHLN-PEIQLQMDNHMAKIDNNVKEA--AYHAWLGYYNSIR 794
FL LK +PL + + +IQ Q++ + K K A AY A++ Y+S
Sbjct: 503 LGFLRYLKQAKVPLSEFEFSWSKISDIQTQLEKLIEKNYYLHKSAQEAYKAYIRAYDSHS 562
Query: 795 EIGRDKTTLVELANKFAQSIGLQRPP 820
+ L K A S G Q PP
Sbjct: 563 HKQIFDVNTLNLP-KVAISFGFQVPP 587
>gi|229065471|ref|ZP_04200719.1| ATP-dependent RNA helicase [Bacillus cereus AH603]
gi|228715789|gb|EEL67561.1| ATP-dependent RNA helicase [Bacillus cereus AH603]
Length = 450
Score = 219 bits (559), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 136/383 (35%), Positives = 201/383 (52%), Gaps = 41/383 (10%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
K F E GIS L G + T +QE + + GKD + +AKTGTGK++AF+LP +
Sbjct: 5 KNFLELGISETFNHTLRENGITEATPIQEKAIPVIMSGKDIIGQAKTGTGKTLAFVLPIL 64
Query: 439 EAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
E + +S + LI+ PTRELA QI E +L + I VL + GG
Sbjct: 65 EKIDPESSD--------VQALIVAPTRELALQITTEIKKMLVQREDINVLAIYGGQDVAQ 116
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
R+L+ + I+VATPGRLLDHI ++ + L L +VLDEAD +L GF D+E+I
Sbjct: 117 QLRKLKGN-THIVVATPGRLLDHIRRET---IDLSNLSTIVLDEADQMLYFGFLYDIEDI 172
Query: 559 VDCLPRRRQSLLFSATMPKEL--------------VLKREHTYIDTVGLGSVETPVKIKQ 604
+D P +Q++LFSATMPK++ ++ E +DT+ +ET + K
Sbjct: 173 LDETPDSKQTMLFSATMPKDIKKLAKRYMEEPQMIQVQSEEVTVDTIEQRVIETTDRAK- 231
Query: 605 SCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSR 664
P L F + + ++FC T + S LY L+ + N E++
Sbjct: 232 -----PDALRFVMDRD---------QPFLAVIFCRTKVRVSKLYDNLKGLGYNCAELHGD 277
Query: 665 KPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGR 724
PQ R+R+ + FR +K L+ +DV+ARG+D VT V IP D E YIHR+GRTGR
Sbjct: 278 IPQAKRERVMKSFREAKIQYLIATDVAARGLDVDGVTHVFNFDIPEDVESYIHRIGRTGR 337
Query: 725 EGKEGEGVLLLAPWEEYFLDDLK 747
G G + +A +E L++++
Sbjct: 338 AGGSGLAITFVAAKDEKHLEEIE 360
>gi|229184685|ref|ZP_04311885.1| ATP-dependent RNA helicase [Bacillus cereus BGSC 6E1]
gi|228598789|gb|EEK56409.1| ATP-dependent RNA helicase [Bacillus cereus BGSC 6E1]
Length = 447
Score = 219 bits (559), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 137/383 (35%), Positives = 201/383 (52%), Gaps = 41/383 (10%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
K F E GIS L G + T +QE + L GKD + +AKTGTGK++AF+LP +
Sbjct: 2 KNFLELGISETFNHTLRENGITEATPIQEKAIPVILSGKDIIGQAKTGTGKTLAFVLPIL 61
Query: 439 EAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
E + +S + LI+ PTRELA QI E +L + I VL + GG
Sbjct: 62 EKIDPESSD--------VQALIVAPTRELALQITTEIKKMLVQREDINVLAIYGGQDVAQ 113
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
R+L+ + I+VATPGRLLDHI ++ + L L +VLDEAD +L GF D+E+I
Sbjct: 114 QLRKLKGN-THIVVATPGRLLDHIRRET---IDLSNLSTIVLDEADQMLYFGFLYDIEDI 169
Query: 559 VDCLPRRRQSLLFSATMPKEL--------------VLKREHTYIDTVGLGSVETPVKIKQ 604
+D P +Q++LFSATMPK++ ++ E +DT+ +ET + K
Sbjct: 170 LDETPGSKQTMLFSATMPKDIKKLAKRYMDEPQMIQVQSEEVTVDTIEQRVIETTDRAK- 228
Query: 605 SCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSR 664
P L F + + ++FC T + S LY L+ + N E++
Sbjct: 229 -----PDALRFVMDRD---------QPFLAVIFCRTKVRASKLYDNLKGLGYNCAELHGD 274
Query: 665 KPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGR 724
PQ R+R+ + FR +K L+ +DV+ARG+D VT V IP D E YIHR+GRTGR
Sbjct: 275 IPQAKRERVMKSFREAKIQYLIATDVAARGLDVDGVTHVFNYDIPEDVESYIHRIGRTGR 334
Query: 725 EGKEGEGVLLLAPWEEYFLDDLK 747
G G + +A +E L++++
Sbjct: 335 AGGSGLAITFVAAKDEKHLEEIE 357
>gi|423568610|ref|ZP_17544857.1| hypothetical protein II7_01833 [Bacillus cereus MSX-A12]
gi|401210898|gb|EJR17649.1| hypothetical protein II7_01833 [Bacillus cereus MSX-A12]
Length = 454
Score = 219 bits (559), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 138/376 (36%), Positives = 202/376 (53%), Gaps = 19/376 (5%)
Query: 375 ILSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFL 434
+++ K F E GIS L G + T +QE + L GKD + +AKTGTGK++AF+
Sbjct: 1 MVNVKNFLELGISETFNHTLRENGITEATPIQEQAIPVILSGKDIIGQAKTGTGKTLAFV 60
Query: 435 LPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGT 494
LP +E + S + LI+ PTRELA QI E +L + I VL + GG
Sbjct: 61 LPILEKIDPECSD--------VQALIVAPTRELALQITTEIKKMLVQREDINVLAIYGGQ 112
Query: 495 RFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKD 554
RRL+ + I+VATPGRLLDHI ++ + L L +VLDEAD +L GF D
Sbjct: 113 DVAQQLRRLKGN-THIVVATPGRLLDHIRRET---IDLSNLTTIVLDEADQMLYFGFLYD 168
Query: 555 VENIVDCLPRRRQSLLFSATMPKEL--VLKREHTYIDTVGLGSVETPVK-IKQSCLVAPH 611
+E+I+D P +Q++LFSATMPK++ + KR V + S E V I+Q +
Sbjct: 169 IEDILDETPGSKQTMLFSATMPKDIKKLAKRYMDEPQMVQVQSEEVTVNTIEQRVIETTD 228
Query: 612 ELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRD 671
L ++ + ++FC T + S LY L+ + N E++ PQ R+
Sbjct: 229 RAKPDALRFVMDRD----QPFLAVIFCRTKVRASKLYDNLKGLGYNCAELHGDIPQAKRE 284
Query: 672 RISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEG 731
R+ + FR +K L+ +DV+ARG+D VT V IP D E YIHR+GRTGR G G
Sbjct: 285 RVMKSFREAKIQYLIATDVAARGLDVDGVTHVFNYDIPEDVESYIHRIGRTGRAGGSGLA 344
Query: 732 VLLLAPWEEYFLDDLK 747
+ +A +E L++++
Sbjct: 345 ITFVAAKDEKHLEEIE 360
>gi|423391251|ref|ZP_17368477.1| hypothetical protein ICG_03099 [Bacillus cereus BAG1X1-3]
gi|401637084|gb|EJS54837.1| hypothetical protein ICG_03099 [Bacillus cereus BAG1X1-3]
Length = 450
Score = 219 bits (559), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 136/383 (35%), Positives = 201/383 (52%), Gaps = 41/383 (10%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
K F E GIS L G + T +QE + + GKD + +AKTGTGK++AF+LP +
Sbjct: 5 KNFLELGISETFNHTLRENGITEATPIQEKAIPVIMSGKDIIGQAKTGTGKTLAFVLPIL 64
Query: 439 EAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
E + +S + LI+ PTRELA QI E +L + I VL + GG
Sbjct: 65 EKIDPESSD--------VQALIVAPTRELALQITTEIKKMLVQREDINVLAIYGGQDVAQ 116
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
R+L+ + I+VATPGRLLDHI ++ + L L +VLDEAD +L GF D+E+I
Sbjct: 117 QLRKLKGN-THIVVATPGRLLDHIRRET---IDLSNLSTIVLDEADQMLYFGFLYDIEDI 172
Query: 559 VDCLPRRRQSLLFSATMPKEL--------------VLKREHTYIDTVGLGSVETPVKIKQ 604
+D P +Q++LFSATMPK++ ++ E +DT+ +ET + K
Sbjct: 173 LDETPGSKQTMLFSATMPKDIKKLAKRYMDEPQMIQVQSEEVTVDTIEQRVIETTDRAK- 231
Query: 605 SCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSR 664
P L F + + ++FC T + S LY L+ + N E++
Sbjct: 232 -----PDALRFVMDRD---------QPFLAVIFCRTKVRASKLYDNLKGLGYNCAELHGD 277
Query: 665 KPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGR 724
PQ R+R+ + FR +K L+ +DV+ARG+D VT V IP D E YIHR+GRTGR
Sbjct: 278 IPQAKRERVMKSFREAKIQYLIATDVAARGLDVDGVTHVFNFDIPEDVESYIHRIGRTGR 337
Query: 725 EGKEGEGVLLLAPWEEYFLDDLK 747
G G + +A +E L++++
Sbjct: 338 AGGSGLAITFVAAKDEKHLEEIE 360
>gi|70992287|ref|XP_750992.1| DEAD box RNA helicase (Hca4) [Aspergillus fumigatus Af293]
gi|74670609|sp|Q4WM60.1|DBP4_ASPFU RecName: Full=ATP-dependent RNA helicase dbp4
gi|66848625|gb|EAL88954.1| DEAD box RNA helicase (Hca4), putative [Aspergillus fumigatus
Af293]
gi|159124561|gb|EDP49679.1| DEAD box RNA helicase (Hca4), putative [Aspergillus fumigatus
A1163]
Length = 787
Score = 219 bits (559), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 156/456 (34%), Positives = 243/456 (53%), Gaps = 29/456 (6%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
K F + +S T L ++ Y +T +Q +S L+G+D + AKTG+GK++AFL+P +
Sbjct: 47 KSFSDLPLSEPTASGLASSHYKTLTDIQSRAISHALKGRDILGAAKTGSGKTLAFLVPVL 106
Query: 439 EAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
E + + + L LIL PTRELA QI E + + + ++GG K
Sbjct: 107 ENLYRKQWAEHDGLG----ALILSPTRELAIQIF-EVLRKIGRYHTFSAGLVIGGKSLKE 161
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
+Q RL ILV TPGR+L H++ + L+MLVLDEAD +LDLGF++ V+ I
Sbjct: 162 EQERLGR--MNILVCTPGRMLQHLDQTALFDT--YNLQMLVLDEADRILDLGFQQTVDAI 217
Query: 559 VDCLPRRRQSLLFSATMPKEL-----VLKREHTYIDTVGLGSVETPVKIKQSCLVAPHEL 613
+ LP+ RQ+LLFSAT K++ + ++ Y+ S TP K++Q ++ P
Sbjct: 218 IGHLPKERQTLLFSATQTKKVSDLARLSLQDPEYVAVHETASSATPSKLQQHYVITPLPQ 277
Query: 614 HFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK--MNVREMYSRKPQLYRD 671
IL ++ ++ K +VF S+G +Y R ++ + + ++ R+ Q R
Sbjct: 278 KLDILWSFIRSNLKS----KTMVFLSSGKQVRFVYESFRHLQPGIPLMHLHGRQKQGGRL 333
Query: 672 RISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEG 731
I F SK +L ++DV+ARG+D+P V V+Q+ P D + YIHR+GRT R +EG
Sbjct: 334 DIVTRFSQSKHCVLFSTDVAARGLDFPAVDWVIQLDCPEDADTYIHRVGRTARYEREGRA 393
Query: 732 VLLLAPWEEY-FLDDL--KDLPLDKLQL-PHLNPEIQLQMDNHMAKIDNNVKEAAYHAWL 787
VL L P EE L L K +P++K+ + + I+ Q+ N M D +K A++
Sbjct: 394 VLFLDPSEEEGMLKRLEQKKVPIEKINIKANKQQSIKDQLQN-MCFKDPELKYLGQKAFI 452
Query: 788 GYYNSIREIGRDKTT--LVELA-NKFAQSIGLQRPP 820
Y S+ I +DK L EL ++FA S+GL P
Sbjct: 453 SYVKSVY-IQKDKEIFKLKELKLDEFAASLGLPGAP 487
>gi|395763810|ref|ZP_10444479.1| ATP-dependent RNA helicase [Janthinobacterium lividum PAMC 25724]
Length = 515
Score = 219 bits (559), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 134/373 (35%), Positives = 212/373 (56%), Gaps = 14/373 (3%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F + G++P +ALT GY T +QE + L+G+D + A+TGTGK+ F LP I+
Sbjct: 39 FADFGLAPEIQRALTDQGYTHPTPIQEQAIPVVLQGRDVMGAAQTGTGKTAGFSLPIIQL 98
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
++ SSS + P+ LIL PTRELA Q+ AE + H + + GG K Q
Sbjct: 99 LMAHASSSMSPARHPVRALILTPTRELAVQV-AENVKAYAKHTPLRSTVVFGGMDMK-PQ 156
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
L +I++ATPGRLLDHIE K ++ L ++MLV+DEAD +LD+GF D++ I++
Sbjct: 157 TVLLRGGVEIVIATPGRLLDHIEQK---NISLSQVQMLVMDEADRMLDMGFLPDLQRIIN 213
Query: 561 CLPRRRQSLLFSATMPKELVLKREHTYID---TVGLG-SVETPVKIKQSCLVAPHELHFQ 616
LP++RQ+L+FSAT E + K T+++ T+ + S +T K+ Q +
Sbjct: 214 LLPKQRQNLMFSATFSPE-IKKLAATFLNDPLTIEVARSNQTADKVTQVVYKVSEDQKHA 272
Query: 617 ILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEE 676
++ HLL++ L +VIVF +T + S L +L + M+ ++ K Q R E
Sbjct: 273 LVAHLLRQRDL----KQVIVFSNTKIGASRLARVLEQEGMSATAIHGDKSQQERMAALEA 328
Query: 677 FRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLA 736
F+ + +LV +DV+ARG+D D+ V+ +P + E Y+HR+GRTGR G G+ + + +
Sbjct: 329 FKKGEIDVLVATDVAARGLDISDLPCVINFDLPYNAEDYVHRIGRTGRAGASGDAISIYS 388
Query: 737 PWEEYFLDDLKDL 749
+E L D++ L
Sbjct: 389 DKDERLLADIEKL 401
>gi|62857681|ref|NP_001016776.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 18 [Xenopus (Silurana)
tropicalis]
gi|89270404|emb|CAJ82546.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 18 [Xenopus (Silurana)
tropicalis]
Length = 640
Score = 219 bits (559), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 155/447 (34%), Positives = 247/447 (55%), Gaps = 33/447 (7%)
Query: 390 TIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSST 449
T++A+T G+ MT +Q + LEG+D + A+TG+GK++AFL+PAIE V K
Sbjct: 158 TLRAVTEMGFTHMTEIQHKAIRPLLEGRDVLAAARTGSGKTLAFLIPAIELVYK------ 211
Query: 450 TQLVP--PIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDP 507
+ +P VLIL PTRELA Q L+ +H L ++GG+ + ++L ++
Sbjct: 212 LKFMPRNGTGVLILSPTRELAMQTYGVLKELMAHHVHTFGL-IMGGSNRSAEAQKL-ANG 269
Query: 508 CQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQ 567
I+VATPGRLLDH++N G + L+ LV+DEAD +L++GF ++++ I++ LP+RRQ
Sbjct: 270 VNIVVATPGRLLDHMQNTPGFMYK--NLQCLVIDEADRILEVGFEQEMKQIINLLPKRRQ 327
Query: 568 SLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILHHL 621
++LFSAT ++ + LK+E Y+ T ++Q +V P E F +L
Sbjct: 328 TMLFSATQTRKVEDLARISLKKEPLYVGVDDHKETATVDGLEQGYVVCPSEKRFLLLFTF 387
Query: 622 LKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEFRASK 681
LK++ K++VF S+ M Y LL + + V ++ ++ Q R +F ++
Sbjct: 388 LKKN----RKKKMMVFFSSCMSVKYHYELLNYIDLPVMAIHGKQKQTKRTTTFFQFCNAE 443
Query: 682 RLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEG--VLLLAPWE 739
IL+ +DV+ARG+D P+V +VQ P D ++YIHR+GRT R G +G G +L+L P E
Sbjct: 444 SGILLCTDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTAR-GIDGRGHALLILRPEE 502
Query: 740 EYFLDDLKD--LPLDKLQLPHLN-PEIQLQMDNHMAK---IDNNVKEAAYHAWLGYYNSI 793
FL LK +PL + + +IQ Q++ + K + + +E AY A++ Y+S
Sbjct: 503 LGFLRYLKQAKVPLSEFEFSWSKISDIQTQLEKLIEKNYYLHKSAQE-AYKAYIRAYDSH 561
Query: 794 REIGRDKTTLVELANKFAQSIGLQRPP 820
+ L K A S G Q PP
Sbjct: 562 SHKQIFDVNTLNLP-KVAISFGFQVPP 587
>gi|423593605|ref|ZP_17569636.1| hypothetical protein IIG_02473 [Bacillus cereus VD048]
gi|401226627|gb|EJR33166.1| hypothetical protein IIG_02473 [Bacillus cereus VD048]
Length = 450
Score = 219 bits (559), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 136/383 (35%), Positives = 201/383 (52%), Gaps = 41/383 (10%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
K F E GIS L G + T +QE + + GKD + +AKTGTGK++AF+LP +
Sbjct: 5 KNFLELGISETFNHTLRENGITEATPIQEKAIPVIMSGKDIIGQAKTGTGKTLAFVLPIL 64
Query: 439 EAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
E + +S + LI+ PTRELA QI E +L + I VL + GG
Sbjct: 65 EKIDPESSD--------VQALIVAPTRELALQITTEIKKMLVQREDINVLAIYGGQDVAQ 116
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
R+L+ + I+VATPGRLLDHI ++ + L L +VLDEAD +L GF D+E+I
Sbjct: 117 QLRKLKGN-THIVVATPGRLLDHIRRET---IDLSNLSTIVLDEADQMLYFGFLYDIEDI 172
Query: 559 VDCLPRRRQSLLFSATMPKEL--------------VLKREHTYIDTVGLGSVETPVKIKQ 604
+D P +Q++LFSATMPK++ ++ E +DT+ +ET + K
Sbjct: 173 LDETPDSKQTMLFSATMPKDIKKLAKRYMEEPQMIQVQSEEVTVDTIEQRVIETTDRAK- 231
Query: 605 SCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSR 664
P L F + + ++FC T + S LY L+ + N E++
Sbjct: 232 -----PDALRFVMDRD---------QPFLAVIFCRTKVRVSKLYDNLKGLGYNCAELHGD 277
Query: 665 KPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGR 724
PQ R+R+ + FR +K L+ +DV+ARG+D VT V IP D E YIHR+GRTGR
Sbjct: 278 IPQAKRERVMKSFREAKIQYLIATDVAARGLDVDGVTHVFNFDIPEDVESYIHRIGRTGR 337
Query: 725 EGKEGEGVLLLAPWEEYFLDDLK 747
G G + +A +E L++++
Sbjct: 338 AGGSGLAITFVATKDEKHLEEIE 360
>gi|423517202|ref|ZP_17493683.1| hypothetical protein IG7_02272 [Bacillus cereus HuA2-4]
gi|423668136|ref|ZP_17643165.1| hypothetical protein IKO_01833 [Bacillus cereus VDM034]
gi|423675737|ref|ZP_17650676.1| hypothetical protein IKS_03280 [Bacillus cereus VDM062]
gi|401163474|gb|EJQ70819.1| hypothetical protein IG7_02272 [Bacillus cereus HuA2-4]
gi|401302127|gb|EJS07707.1| hypothetical protein IKO_01833 [Bacillus cereus VDM034]
gi|401308761|gb|EJS14156.1| hypothetical protein IKS_03280 [Bacillus cereus VDM062]
Length = 450
Score = 219 bits (559), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 136/383 (35%), Positives = 201/383 (52%), Gaps = 41/383 (10%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
K F E GIS L G + T +QE + + GKD + +AKTGTGK++AF+LP +
Sbjct: 5 KNFLELGISETFNHTLRENGITEATPIQEKAIPVIMSGKDIIGQAKTGTGKTLAFVLPIL 64
Query: 439 EAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
E + +S + LI+ PTRELA QI E +L + I VL + GG
Sbjct: 65 EKIDPESSD--------VQALIVAPTRELALQITTEIKKMLVQREDINVLAIYGGQDVAQ 116
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
R+L+ + I+VATPGRLLDHI ++ + L L +VLDEAD +L GF D+E+I
Sbjct: 117 QLRKLKGN-THIVVATPGRLLDHIRRET---IDLSNLSTIVLDEADQMLYFGFLYDIEDI 172
Query: 559 VDCLPRRRQSLLFSATMPKEL--------------VLKREHTYIDTVGLGSVETPVKIKQ 604
+D P +Q++LFSATMPK++ ++ E +DT+ +ET + K
Sbjct: 173 LDETPDSKQTMLFSATMPKDIKKLAKRYMEEPQMIQVQSEEVTVDTIEQRVIETTDRAK- 231
Query: 605 SCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSR 664
P L F + + ++FC T + S LY L+ + N E++
Sbjct: 232 -----PDALRFVMDRD---------QPFLAVIFCRTKVRASKLYDDLKGLGYNCAELHGD 277
Query: 665 KPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGR 724
PQ R+R+ + FR +K L+ +DV+ARG+D VT V IP D E YIHR+GRTGR
Sbjct: 278 IPQAKRERVMKSFREAKIQYLIATDVAARGLDVDGVTHVFNFDIPEDVESYIHRIGRTGR 337
Query: 725 EGKEGEGVLLLAPWEEYFLDDLK 747
G G + +A +E L++++
Sbjct: 338 AGGSGLAITFVAAKDEKHLEEIE 360
>gi|49477717|ref|YP_036595.1| ATP-dependent RNA helicase [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|118477863|ref|YP_895014.1| DEAD/DEAH box helicase [Bacillus thuringiensis str. Al Hakam]
gi|196033783|ref|ZP_03101194.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Bacillus cereus
W]
gi|196043209|ref|ZP_03110447.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Bacillus cereus
03BB108]
gi|225864437|ref|YP_002749815.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Bacillus cereus
03BB102]
gi|228927528|ref|ZP_04090581.1| ATP-dependent RNA helicase [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228946079|ref|ZP_04108415.1| ATP-dependent RNA helicase [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
gi|229122021|ref|ZP_04251237.1| ATP-dependent RNA helicase [Bacillus cereus 95/8201]
gi|376266386|ref|YP_005119098.1| ATP-dependent RNA helicase [Bacillus cereus F837/76]
gi|49329273|gb|AAT59919.1| ATP-dependent RNA helicase [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|118417088|gb|ABK85507.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Bacillus
thuringiensis str. Al Hakam]
gi|195993463|gb|EDX57420.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Bacillus cereus
W]
gi|196025518|gb|EDX64187.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Bacillus cereus
03BB108]
gi|225786741|gb|ACO26958.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Bacillus cereus
03BB102]
gi|228661364|gb|EEL16988.1| ATP-dependent RNA helicase [Bacillus cereus 95/8201]
gi|228813592|gb|EEM59877.1| ATP-dependent RNA helicase [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
gi|228832136|gb|EEM77720.1| ATP-dependent RNA helicase [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|364512186|gb|AEW55585.1| ATP-dependent RNA helicase [Bacillus cereus F837/76]
Length = 450
Score = 219 bits (559), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 137/383 (35%), Positives = 201/383 (52%), Gaps = 41/383 (10%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
K F E GIS L G + T +QE + L GKD + +AKTGTGK++AF+LP +
Sbjct: 5 KNFLELGISETFNHTLRENGITEATPIQEKAIPVILSGKDIIGQAKTGTGKTLAFVLPIL 64
Query: 439 EAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
E + +S + LI+ PTRELA QI E +L + I VL + GG
Sbjct: 65 EKIDPESSD--------VQALIVAPTRELALQITTEIKKMLVQREDINVLAIYGGQDVAQ 116
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
R+L+ + I+VATPGRLLDHI ++ + L L +VLDEAD +L GF D+E+I
Sbjct: 117 QLRKLKGN-THIVVATPGRLLDHIRRET---IDLSNLSTIVLDEADQMLYFGFLYDIEDI 172
Query: 559 VDCLPRRRQSLLFSATMPKEL--------------VLKREHTYIDTVGLGSVETPVKIKQ 604
+D P +Q++LFSATMPK++ ++ E +DT+ +ET + K
Sbjct: 173 LDETPGSKQTMLFSATMPKDIKKLAKRYMDEPQMIQVQSEEVTVDTIEQRVIETTDRAK- 231
Query: 605 SCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSR 664
P L F + + ++FC T + S LY L+ + N E++
Sbjct: 232 -----PDALRFVMDRD---------QPFLAVIFCRTKVRASKLYDNLKGLGYNCAELHGD 277
Query: 665 KPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGR 724
PQ R+R+ + FR +K L+ +DV+ARG+D VT V IP D E YIHR+GRTGR
Sbjct: 278 IPQAKRERVMKSFREAKIQYLIATDVAARGLDVDGVTHVFNYDIPEDVESYIHRIGRTGR 337
Query: 725 EGKEGEGVLLLAPWEEYFLDDLK 747
G G + +A +E L++++
Sbjct: 338 AGGSGLAITFVAAKDEKHLEEIE 360
>gi|163940245|ref|YP_001645129.1| DEAD/DEAH box helicase [Bacillus weihenstephanensis KBAB4]
gi|163862442|gb|ABY43501.1| DEAD/DEAH box helicase domain protein [Bacillus weihenstephanensis
KBAB4]
Length = 450
Score = 219 bits (559), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 136/383 (35%), Positives = 201/383 (52%), Gaps = 41/383 (10%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
K F E GIS L G + T +QE + + GKD + +AKTGTGK++AF+LP +
Sbjct: 5 KNFLELGISETFNHTLRENGITEATPIQEKAIPVIMSGKDIIGQAKTGTGKTLAFVLPIL 64
Query: 439 EAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
E + +S + LI+ PTRELA QI E +L + I VL + GG
Sbjct: 65 EKIDPESSD--------VQALIVAPTRELALQITTEIKKMLVQREDINVLAIYGGQDVAQ 116
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
R+L+ + I+VATPGRLLDHI ++ + L L +VLDEAD +L GF D+E+I
Sbjct: 117 QLRKLKGN-THIVVATPGRLLDHIRRET---IDLSNLSTIVLDEADQMLYFGFLYDIEDI 172
Query: 559 VDCLPRRRQSLLFSATMPKEL--------------VLKREHTYIDTVGLGSVETPVKIKQ 604
+D P +Q++LFSATMPK++ ++ E +DT+ +ET + K
Sbjct: 173 LDETPDSKQTMLFSATMPKDIKKLAKRYMEEPQMIQVQSEEVTVDTIEQRVIETTDRAK- 231
Query: 605 SCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSR 664
P L F + + ++FC T + S LY L+ + N E++
Sbjct: 232 -----PDALRFVMDRD---------QPFLAVIFCRTKVRASKLYDDLKGLGYNCAELHGD 277
Query: 665 KPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGR 724
PQ R+R+ + FR +K L+ +DV+ARG+D VT V IP D E YIHR+GRTGR
Sbjct: 278 IPQAKRERVMKSFREAKIQYLIATDVAARGLDVDGVTHVFNFDIPEDVESYIHRIGRTGR 337
Query: 725 EGKEGEGVLLLAPWEEYFLDDLK 747
G G + +A +E L++++
Sbjct: 338 AGGSGLAITFVAAKDEKHLEEIE 360
>gi|242020238|ref|XP_002430562.1| ATP-dependent RNA helicase DBP4, putative [Pediculus humanus
corporis]
gi|212515734|gb|EEB17824.1| ATP-dependent RNA helicase DBP4, putative [Pediculus humanus
corporis]
Length = 606
Score = 219 bits (558), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 161/486 (33%), Positives = 262/486 (53%), Gaps = 36/486 (7%)
Query: 354 EISKNKLNGNGEKKEKREEEPIL---SQKRFDECGISPLTIKALTAAGYIQMTRVQEATL 410
E K KL +GE K +E + + K+F + +S T+K L + YI + +Q ++
Sbjct: 23 ERKKKKLAVHGEIKSIQESYSSIDPSNIKKFSDFPLSRSTLKGLYESNYITPSEIQRESI 82
Query: 411 SACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQ 470
L+G+D + A+TG+GK++AFL+P +E + T+L + LI+ PTRELA Q
Sbjct: 83 GYALQGEDVLGAAQTGSGKTLAFLIPVLEILY---CKQWTRL-DGVGALIITPTRELAYQ 138
Query: 471 IAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSV 530
I + K+HD L ++GG ++ R+ D C I++ TPGR+L H++
Sbjct: 139 IFETLKKIGKHHDFSAGL-IIGGKDLHFEKGRM--DQCNIIICTPGRILHHMDENPLFDC 195
Query: 531 RLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQSLLFSATMPKE------LVLKRE 584
M ++LVLDEAD LDLGF++ + NI++ LP +RQ+LLFSAT K L LK
Sbjct: 196 NSM--QILVLDEADRCLDLGFQETMNNIIENLPPKRQTLLFSATQTKSVKDLARLSLKNP 253
Query: 585 HTYIDTVGLGSVETPVKIKQSCLVAPHELH--FQILHHLLKEHILGTPDYKVIVFCSTGM 642
Y+ S TP ++QS +V ELH +++ +K H K+++F S+
Sbjct: 254 -KYVAVHEHKSHSTPESLEQSYVVC--ELHDKIKMIWSFIKNH----KRQKILIFLSSCK 306
Query: 643 VTSLLYLLLREMKMN--VREMYSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDV 700
+YLL ++ + +Y + QL R +I +EF A + +++ +D++ARG+D+PDV
Sbjct: 307 QVKYIYLLFCRLRPGSPLLALYGKLHQLRRMKIYDEFCAKQNVVMFATDIAARGLDFPDV 366
Query: 701 TSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLAPWEEYFLDD---LKDLPLDKLQL- 756
VVQ+ P D + YIHR GRT R K GE +L+L P EE + + + +P+ K+++
Sbjct: 367 NWVVQLDCPEDAKTYIHRAGRTARYKKGGESLLVLLPSEEKAMSEELSAEKIPISKIEIN 426
Query: 757 PHLNPEIQLQMDNHMAKIDNNVKEAAYHAWLGYYNSIREIGRDKTTLVELAN--KFAQSI 814
P + +++ +A+ D N+K A A++ Y + + VE N K+A S+
Sbjct: 427 PKMLQSPARKIEALVAR-DPNLKLDAQRAFVAYIKGVFLMKNKNIFNVEALNLEKYAYSL 485
Query: 815 GLQRPP 820
GL P
Sbjct: 486 GLAVMP 491
>gi|228908214|ref|ZP_04072060.1| ATP-dependent RNA helicase [Bacillus thuringiensis IBL 200]
gi|228851412|gb|EEM96220.1| ATP-dependent RNA helicase [Bacillus thuringiensis IBL 200]
Length = 454
Score = 219 bits (558), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 137/383 (35%), Positives = 201/383 (52%), Gaps = 41/383 (10%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
K F E GIS L G + T +QE + L GKD + +AKTGTGK++AF+LP +
Sbjct: 5 KNFLELGISETFNHTLRENGITEATPIQEKAIPVILSGKDIIGQAKTGTGKTLAFVLPIL 64
Query: 439 EAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
E + +S + LI+ PTRELA QI E +L + I VL + GG
Sbjct: 65 EKINPESSD--------VQALIVAPTRELALQITTEIKKMLVQREDINVLAIYGGQDVAQ 116
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
R+L+ + I+VATPGRLLDHI ++ + L L +VLDEAD +L GF D+E+I
Sbjct: 117 QLRKLKGN-THIVVATPGRLLDHIRRET---IDLSNLSTIVLDEADQMLYFGFLYDIEDI 172
Query: 559 VDCLPRRRQSLLFSATMPKEL--------------VLKREHTYIDTVGLGSVETPVKIKQ 604
+D P +Q++LFSATMPK++ ++ E +DT+ +ET + K
Sbjct: 173 LDETPGSKQTMLFSATMPKDIKKLAKRYMDEPQMIQVQSEEVTVDTIEQRVIETTDRAK- 231
Query: 605 SCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSR 664
P L F + + ++FC T + S LY L+ + N E++
Sbjct: 232 -----PDALRFVMDRD---------QPFLAVIFCRTKVRASKLYDNLKGLGYNCAELHGD 277
Query: 665 KPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGR 724
PQ R+R+ + FR +K L+ +DV+ARG+D VT V IP D E YIHR+GRTGR
Sbjct: 278 IPQAKRERVMKSFREAKIQYLIATDVAARGLDVDGVTHVFNFDIPEDVESYIHRIGRTGR 337
Query: 725 EGKEGEGVLLLAPWEEYFLDDLK 747
G G + +A +E L++++
Sbjct: 338 AGGSGLAITFVAAKDEKHLEEIE 360
>gi|402557327|ref|YP_006598598.1| DEAD/DEAH box helicase [Bacillus cereus FRI-35]
gi|401798537|gb|AFQ12396.1| DEAD/DEAH box helicase [Bacillus cereus FRI-35]
Length = 450
Score = 219 bits (558), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 135/385 (35%), Positives = 203/385 (52%), Gaps = 45/385 (11%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
K F E GIS L G + T +QE + + GKD + +AKTGTGK++AF+LP +
Sbjct: 5 KNFLELGISETFNHTLRENGITEATPIQEKAIPVIMSGKDIIGQAKTGTGKTLAFVLPIL 64
Query: 439 EAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
E + S + LI+ PTRELA QI E +L + I VL + GG
Sbjct: 65 EKIDPECSD--------VQALIVAPTRELALQITTEIKKMLVQREDINVLAIYGGQDVAQ 116
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
R+L+ + I+VATPGRLLDHI ++ + L L +VLDEAD +L GF D+E+I
Sbjct: 117 QLRKLKGN-THIVVATPGRLLDHIRRET---IDLSNLSTIVLDEADQMLYFGFLYDIEDI 172
Query: 559 VDCLPRRRQSLLFSATMPKELVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQIL 618
+D P +Q++LFSATMPK+ + K Y+D + VE+ ++
Sbjct: 173 LDETPGSKQTMLFSATMPKD-IKKLAKRYMDEPQMIQVESE----------------EVT 215
Query: 619 HHLLKEHILGTPD----------------YKVIVFCSTGMVTSLLYLLLREMKMNVREMY 662
+ +++H++ T D + ++FC T + S LY L+ + N E++
Sbjct: 216 VNTIEQHVIETTDRAKPDALRFVMDRDQPFLAVIFCRTKVRASKLYDNLKGLGYNCAELH 275
Query: 663 SRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRT 722
PQ R+R+ + FR +K L+ +DV+ARG+D VT V IP D E YIHR+GRT
Sbjct: 276 GDIPQAKRERVMKSFREAKIQYLIATDVAARGLDVDGVTHVFNYDIPEDVESYIHRIGRT 335
Query: 723 GREGKEGEGVLLLAPWEEYFLDDLK 747
GR G G + +A +E L++++
Sbjct: 336 GRAGGSGLAITFVAAKDEKHLEEIE 360
>gi|229085402|ref|ZP_04217643.1| ATP-dependent RNA helicase [Bacillus cereus Rock3-44]
gi|228697878|gb|EEL50622.1| ATP-dependent RNA helicase [Bacillus cereus Rock3-44]
Length = 433
Score = 219 bits (558), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 140/387 (36%), Positives = 207/387 (53%), Gaps = 24/387 (6%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
K F E GIS L G + T +QE + + GKD + +AKTGTGK++AF+LP +
Sbjct: 2 KNFLELGISETFNHTLRENGIAEATPIQEQAIPVVMAGKDIIGQAKTGTGKTLAFVLPIL 61
Query: 439 EAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
E + +S + LI+ PTRELA QI E +L + + I VL + GG
Sbjct: 62 EKIDPESSD--------VQALIVAPTRELALQITTEIEKMLVHKEDINVLAIYGGQDVAQ 113
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
R+L+ + I+VATPGRLLDH+ ++ + L + MLVLDEAD +L GF D+E+I
Sbjct: 114 QMRKLKGN-THIVVATPGRLLDHLRRET---IVLSNVSMLVLDEADQMLHFGFLYDIEDI 169
Query: 559 VDCLPRRRQSLLFSATMPKEL--VLKREHTYIDTVGLGSVETPVK-IKQSCLVAPHELHF 615
++ P +Q++LFSATMPK++ + KR + + + S E V IKQ +
Sbjct: 170 LEETPESKQTMLFSATMPKDIKKLAKRYMKEPEMIRIQSEEVTVNNIKQRVIETTDRAKQ 229
Query: 616 QILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISE 675
L H++ + ++FC T S LY L+ N E++ Q R+R+ +
Sbjct: 230 DALRHVMDR----DQPFLAVIFCRTKRRASKLYDDLKGYGYNCDELHGDLSQGKRERVMK 285
Query: 676 EFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLL 735
FR +K L+ +DV+ARG+D VT V IP D E YIHR+GRTGR G G + +
Sbjct: 286 SFREAKIQYLIATDVAARGLDVEGVTHVFNYDIPEDVESYIHRIGRTGRAGGSGLAITFV 345
Query: 736 APWEEYFLDDLK-----DLPLDKLQLP 757
AP +E L +++ L +L+LP
Sbjct: 346 APKDEMHLKEIEKGIGTTLQRQELELP 372
>gi|358366429|dbj|GAA83050.1| ATP-dependent RNA helicase Dbp4 [Aspergillus kawachii IFO 4308]
Length = 803
Score = 219 bits (558), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 153/457 (33%), Positives = 244/457 (53%), Gaps = 33/457 (7%)
Query: 380 RFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIE 439
+F + +S T L ++ Y +T +Q +S L+G+D + AKTG+GK++AFL+P +E
Sbjct: 48 QFTDLPLSEPTASGLASSHYKTLTDIQSRAISHALKGRDILGAAKTGSGKTLAFLIPILE 107
Query: 440 AVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVD 499
+ + S L L+L PTRELA QI E + + + ++GG + +
Sbjct: 108 NLYRKQWSEHDGL----GALVLSPTRELAIQIF-EVLRKVGRYHTFSAGLVIGGKSLREE 162
Query: 500 QRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIV 559
Q RL ILV TPGR+L H++ S L+MLVLDEAD +LD+GF+K V+ I+
Sbjct: 163 QERLGR--MNILVCTPGRMLQHLDQTSFFETH--NLQMLVLDEADRILDMGFQKTVDAII 218
Query: 560 DCLPRRRQSLLFSATMPKEL-----VLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELH 614
LP+ RQ+LLFSAT K++ + ++ Y+ S TP K++Q +V P
Sbjct: 219 GHLPKERQTLLFSATQTKKVSDLARLSLQDPEYVAVHETASSATPSKLQQHYVVTPLPQK 278
Query: 615 FQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK--MNVREMYSRKPQLYRDR 672
+L ++ ++ K IVF S+G +Y R M+ + + ++ R+ Q R
Sbjct: 279 LDVLWSFIRSNL----KSKTIVFLSSGKQVRFVYESFRHMQPGIPLMHLHGRQKQGGRLD 334
Query: 673 ISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGV 732
I+ +F +++ +L +DV+ARG+D+P V V+Q+ P D + YIHR+GRT R ++G V
Sbjct: 335 ITTKFSSAQHAVLFATDVAARGLDFPAVDWVIQLDCPEDADTYIHRVGRTARYERDGRAV 394
Query: 733 LLLAPWEEYFLDDLKDLPLDKLQLPHLN------PEIQLQMDNHMAKIDNNVKEAAYHAW 786
L L P EE + LK L K+Q+ +N I+ Q+ N M D +K A+
Sbjct: 395 LFLDPSEEKGM--LKRLEQKKVQVERINIKANKQQSIKDQLQN-MCFKDPELKYLGQKAF 451
Query: 787 LGYYNSIREIGRDKT--TLVELA-NKFAQSIGLQRPP 820
+ Y S+ + +DK + EL ++FA S+GL P
Sbjct: 452 ISYAKSVY-VQKDKEIFNIKELKLDEFAGSMGLPGAP 487
>gi|401625093|gb|EJS43118.1| hca4p [Saccharomyces arboricola H-6]
Length = 770
Score = 219 bits (558), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 167/523 (31%), Positives = 263/523 (50%), Gaps = 59/523 (11%)
Query: 357 KNKLNGNGEKKEKREEEP---------------ILSQKRFDECGISPLTIKALTAAGYIQ 401
KNKLN + K +++E+ I K F + +S T+K L + +I+
Sbjct: 4 KNKLNTSQRKSLRQKEDEYIENLKTKIQEYDPKITKAKFFKDLPLSDPTLKGLRESSFIK 63
Query: 402 MTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLVPPIYVLIL 461
+T +Q ++ L+G D + A+TG+GK++AFL+P IE + + + L LI+
Sbjct: 64 LTEIQTDSIPVSLKGHDVLAAARTGSGKTLAFLIPVIEKLYREKWTEFDGL----GALII 119
Query: 462 CPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDH 521
PTRELA QI E + + +H ++GG K + R+ IL+ TPGR+L H
Sbjct: 120 SPTRELAMQIY-EVLTKIGSHTSFSAGLVIGGKDVKFELERISK--INILIGTPGRILQH 176
Query: 522 IENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQSLLFSATMPKELV- 580
++ GLS L+MLVLDEAD LD+GF+K ++ IV L RQ+LLFSAT + +
Sbjct: 177 LDQAVGLSTS--NLQMLVLDEADRCLDMGFKKTLDAIVSNLSPSRQTLLFSATQSQSVAD 234
Query: 581 LKR----------EHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILHHLLKEHILGTP 630
L R H +D G TP ++QS + P IL +K H+
Sbjct: 235 LARLSLTDYKTVGTHDLMDASGNKDPTTPETLQQSYIEVPLADKLDILFSFIKSHLKS-- 292
Query: 631 DYKVIVFCSTGMVTSLLYLLLREMK--MNVREMYSRKPQLYRDRISEEFRASKRLILVTS 688
K+IVF S+ +Y R+M+ +++ ++ R+ Q R ++F ++++ L +
Sbjct: 293 --KMIVFLSSSKQVHFVYETFRKMQPGISLMHLHGRQKQRARTETLDKFNRAQQVCLFAT 350
Query: 689 DVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLAPWEEYFLDDLKD 748
DV ARG+D+P V VVQV P D + YIHR+GR R GK+G+ +++L P E+ LK
Sbjct: 351 DVVARGIDFPAVDWVVQVDCPEDVDTYIHRVGRCARYGKKGKSLIMLTPQEQEMF--LKR 408
Query: 749 LPLDKLQLPHLNPEIQL------QMDNHMAKIDNNVKEAAYHAWLGYYNSIREIGRDKTT 802
L +++ LN + Q+ + + K D +K A++ Y SI + +DK
Sbjct: 409 LQGRRIEPSKLNIKQSKKKSIKPQLQSLLFK-DPELKYLGQKAFISYVRSIY-VQKDKEV 466
Query: 803 LV--EL-ANKFAQSIGLQRPPPLFRKTALKMGLKDIPGIRLRK 842
EL +FA S+GL P + K G+K I + RK
Sbjct: 467 FKFDELPTEEFAYSLGLPGAPKIKMK-----GMKTIEQAKERK 504
>gi|156386665|ref|XP_001634032.1| predicted protein [Nematostella vectensis]
gi|156221110|gb|EDO41969.1| predicted protein [Nematostella vectensis]
Length = 643
Score = 219 bits (558), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 150/469 (31%), Positives = 254/469 (54%), Gaps = 34/469 (7%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
++F + IS T+ L AG++ T +Q+ + L G+D + AKTG+GK++AFL+P I
Sbjct: 50 EKFSDFPISKRTLDGLMKAGFVTPTDIQKQGIPVALSGRDVLGAAKTGSGKTLAFLIPII 109
Query: 439 EAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
E + + +S L L++ PTRELA Q + + HD + ++GG K
Sbjct: 110 ETLWRQKWTSMDGL----GALVISPTRELAYQTFEVLVKIGNKHD-LSAGLIIGGKDLKN 164
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
+Q+R+ I+V TPGRLL H++ L++LVLDEAD +LD+GF + I
Sbjct: 165 EQKRIMK--TNIVVCTPGRLLQHMDETPNFDC--TSLQILVLDEADRILDMGFAPTLNAI 220
Query: 559 VDCLPRRRQSLLFSATMPKEL-----VLKREHTYIDTVGLGSVETPVKIKQSCLVA--PH 611
++ LP RQ+LL+SAT + + + +E TYI TP ++ QS +V P
Sbjct: 221 IENLPSERQTLLYSATQTRSVKDLARLSLQEPTYISAHEKSDTSTPNRLTQSYVVCELPD 280
Query: 612 ELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK--MNVREMYSRKPQLY 669
+L+F L ++ H+ K++VF S+ +Y R ++ + + +Y ++ QL
Sbjct: 281 KLNF--LFSFIRNHL----KSKILVFVSSCKQVKFIYEGFRRLQPGIPLMALYGKQKQLK 334
Query: 670 RDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEG 729
R I +EF + +L +D++ARG+D+P V V+Q+ P D YIHR GRT R K+G
Sbjct: 335 RVAIYDEFCKKTQCVLFATDIAARGLDFPAVNWVIQLDCPEDANTYIHRAGRTARYQKDG 394
Query: 730 EGVLLLAPWEEY-FLDDLKD--LPLDKLQL-PHLNPEIQLQMDNHMAKIDNNVKEAAYHA 785
+ +L+L P EE + LKD +P++++++ P IQ ++++ +A+ D +K A +
Sbjct: 395 QSLLVLLPSEEQEMIKALKDKKVPINEIKVNPKKMSSIQSKLESFLAQ-DQELKHWAQKS 453
Query: 786 WLGYYNSIREIGRDK---TTLVELANKFAQSIGLQRPPPL-FRKTALKM 830
+ Y S+ K TT + + +F+ S+GL P + F ++AL +
Sbjct: 454 IISYVRSVFLQSNKKIFDTTKLPI-KEFSVSLGLSNAPRIRFLQSALTL 501
>gi|403331185|gb|EJY64526.1| putative ATP-dependent RNA helicase DDX10 [Oxytricha trifallax]
Length = 961
Score = 219 bits (558), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 161/481 (33%), Positives = 234/481 (48%), Gaps = 53/481 (11%)
Query: 380 RFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIE 439
RF + IS T L A +I+MT VQ A +S + G+D VV A+TG+GK++++L+P +E
Sbjct: 109 RFSDLPISKATNNGLYKAKFIKMTEVQRAAISHAIAGRDVVVSARTGSGKTLSYLVPIVE 168
Query: 440 AVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVD 499
+ SS + + LIL P RELA Q A E + + +GG +
Sbjct: 169 RLYHERWSS----MDGLGALILVPVRELALQ-AFEVLRSFGAFHDLSAGLAIGGKDLNYE 223
Query: 500 QRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIV 559
Q R+ IL+ TPGRLL H+ GL LKMLV+DE D +LD+GF+ +E I+
Sbjct: 224 QERIRG--MNILICTPGRLLQHMNESEGLDTS--NLKMLVIDEVDRILDMGFKDTMEQIM 279
Query: 560 DCLPRRRQSLLFSATMPKELV------LKREHTYIDTVGLGSVE---------------- 597
LP++ Q++LFSAT+ K L LK +H YI S+E
Sbjct: 280 RNLPKKTQTMLFSATVGKILKDMARVNLKPDHEYICIHDYDSIESLANDYNPNASAEDKM 339
Query: 598 --------TPVKIKQSCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYL 649
TPVK+ +V E L LK H K IVF S Y
Sbjct: 340 IVDQLKSITPVKLLHFYMVINIEDKLDTLFSFLKSH----QKNKCIVFFSACKQVRFAYE 395
Query: 650 LLREMK--MNVREMYSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVG 707
+ +K M + E++ R+ Q R I EF K+ +L +DV++RG+D+P V VVQ
Sbjct: 396 AFKRLKLGMIMLELHGRQKQTKRTAIYYEFVERKQAVLFCTDVASRGIDFPAVDWVVQYD 455
Query: 708 IPPDREQYIHRLGRTGREGKEGEGVLLLAPWEEYFLDDLKDLPLDKLQLPHLNPEIQLQM 767
P D + YIHR+GRT R +G +L P E F+D ++ + +L+ + NP L +
Sbjct: 456 CPEDLQTYIHRVGRTARYKSKGNALLFSTPAETKFIDKIQQRGI-QLKKLNANPNQALTI 514
Query: 768 DNHMAKI---DNNVKEAAYHAWLGYYNSIREIGRDKTTLV--EL-ANKFAQSIGLQRPPP 821
+ K+ + +VK A A + Y SI + +DK T EL K A S+GL P
Sbjct: 515 QPTLQKLNAENRDVKHLAEKACISYIKSIY-LMKDKETFKFNELDCEKLAYSLGLANAPQ 573
Query: 822 L 822
+
Sbjct: 574 I 574
>gi|119471850|ref|XP_001258227.1| DEAD box RNA helicase (Hca4), putative [Neosartorya fischeri NRRL
181]
gi|134034072|sp|A1DNF9.1|DBP4_NEOFI RecName: Full=ATP-dependent RNA helicase dbp4
gi|119406379|gb|EAW16330.1| DEAD box RNA helicase (Hca4), putative [Neosartorya fischeri NRRL
181]
Length = 810
Score = 219 bits (558), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 156/456 (34%), Positives = 243/456 (53%), Gaps = 29/456 (6%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
K F + +S T L ++ Y +T +Q +S L+G+D + AKTG+GK++AFL+P +
Sbjct: 47 KSFSDLPLSEPTASGLASSHYKTLTDIQSRAISHALKGRDVLGAAKTGSGKTLAFLVPVL 106
Query: 439 EAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
E + + + L LIL PTRELA QI E + + + ++GG K
Sbjct: 107 ENLYRKQWAEHDGLG----ALILSPTRELAIQIF-EVLRKIGRYHTFSAGLVIGGKSLKE 161
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
+Q RL ILV TPGR+L H++ + L+MLVLDEAD +LDLGF++ V+ I
Sbjct: 162 EQERLGR--MNILVCTPGRMLQHLDQTALFDT--YNLQMLVLDEADRILDLGFQQTVDAI 217
Query: 559 VDCLPRRRQSLLFSATMPKEL-----VLKREHTYIDTVGLGSVETPVKIKQSCLVAPHEL 613
+ LP+ RQ+LLFSAT K++ + ++ Y+ S TP K++Q ++ P
Sbjct: 218 IGHLPKERQTLLFSATQTKKVSDLARLSLQDPEYVAVHETASSATPSKLQQHYVITPLPQ 277
Query: 614 HFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK--MNVREMYSRKPQLYRD 671
IL ++ ++ K +VF S+G +Y R ++ + + ++ R+ Q R
Sbjct: 278 KLDILWSFIRSNLKS----KTMVFLSSGKQVRFVYESFRHLQPGIPLMHLHGRQKQGGRL 333
Query: 672 RISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEG 731
I F SK +L ++DV+ARG+D+P V V+Q+ P D + YIHR+GRT R +EG
Sbjct: 334 DIVTRFSQSKHCVLFSTDVAARGLDFPAVDWVIQLDCPEDADTYIHRVGRTARYEREGRA 393
Query: 732 VLLLAPWEEY-FLDDL--KDLPLDKLQL-PHLNPEIQLQMDNHMAKIDNNVKEAAYHAWL 787
VL L P EE L L K +P++K+ + + I+ Q+ N M D +K A++
Sbjct: 394 VLFLDPSEEEGMLKRLEQKKVPIEKINIKANKQQSIKDQLQN-MCFKDPELKYLGQKAFI 452
Query: 788 GYYNSIREIGRDKTT--LVELA-NKFAQSIGLQRPP 820
Y S+ I +DK L EL ++FA S+GL P
Sbjct: 453 SYVKSVY-IQKDKEIFKLKELKLDEFAASLGLPGAP 487
>gi|423580692|ref|ZP_17556803.1| hypothetical protein IIA_02207 [Bacillus cereus VD014]
gi|401216558|gb|EJR23266.1| hypothetical protein IIA_02207 [Bacillus cereus VD014]
Length = 458
Score = 219 bits (558), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 137/383 (35%), Positives = 202/383 (52%), Gaps = 41/383 (10%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
K F E GIS L G + T +QE + + GKD + +AKTGTGK++AF+LP +
Sbjct: 5 KNFLELGISETFNHTLRENGITEATPIQEKAIPVIMSGKDIIGQAKTGTGKTLAFVLPIL 64
Query: 439 EAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
E + A+S + LI+ PTRELA QI E +L + I VL + GG
Sbjct: 65 EKIDPASSD--------VQALIVAPTRELALQITTEIKKMLVQREDINVLAIYGGQDVAQ 116
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
R+L+ + I+VATPGRLLDHI ++ + L L +VLDEAD +L GF D+E+I
Sbjct: 117 QLRKLKGN-THIVVATPGRLLDHIRRET---IDLSNLSTIVLDEADQMLYFGFLYDIEDI 172
Query: 559 VDCLPRRRQSLLFSATMPKEL--------------VLKREHTYIDTVGLGSVETPVKIKQ 604
+D P +Q++LFSATMPK++ ++ E +DT+ +ET + K
Sbjct: 173 LDETPGSKQTMLFSATMPKDIKKLAKRYMDEPQMIQVQSEEVTVDTIEQRVIETTDRAK- 231
Query: 605 SCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSR 664
P L F + + ++FC T + S LY L+ + N E++
Sbjct: 232 -----PDALRFVMDRD---------QPFLAVIFCRTKLRVSKLYDNLKGLGYNCAELHGD 277
Query: 665 KPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGR 724
PQ R+R+ + FR +K L+ +DV+ARG+D VT V IP D E YIHR+GRTGR
Sbjct: 278 IPQAKRERVMKSFREAKIQYLIATDVAARGLDVDGVTHVFNFDIPEDVESYIHRIGRTGR 337
Query: 725 EGKEGEGVLLLAPWEEYFLDDLK 747
G G + +A +E L++++
Sbjct: 338 AGGSGLAITFVAAKDEKHLEEIE 360
>gi|389873083|ref|YP_006380502.1| ATP-dependent RNA helicase [Advenella kashmirensis WT001]
gi|388538332|gb|AFK63520.1| ATP-dependent RNA helicase [Advenella kashmirensis WT001]
Length = 476
Score = 219 bits (558), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 135/376 (35%), Positives = 214/376 (56%), Gaps = 20/376 (5%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F E G+ P +KA+ A+GY + T +QE + ++G+D + A+TGTGK+ AF LP +
Sbjct: 18 FTEVGLHPDLLKAVMASGYTKPTPIQEQAMPLIMDGRDIMGAAQTGTGKTAAFTLPLLHR 77
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
++ +SS + P+ LIL PTRELA Q+ AE++ + + V + GG +
Sbjct: 78 LMPMANSSMSPARHPVRALILAPTRELADQV-AESVKRYSHSSPLRVAVVFGGVDMNAQR 136
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
+L C++L+ATPGRLLDHIE K +V L + +LVLDEAD +LD+GF D+E IV
Sbjct: 137 DQLRKG-CELLIATPGRLLDHIEQK---NVSLSQVSVLVLDEADRMLDMGFLPDLERIVR 192
Query: 561 CLPRRRQSLLFSATMPKELVLKREHTYIDT-VGL------GSVETPVKIKQSCLVAPHEL 613
LP+ RQSLLFSAT + + K ++++ V + + ET +I VAP+E
Sbjct: 193 LLPKPRQSLLFSATFSND-IRKLARSFLNNPVEINVAPRNATAETVTQIAYP--VAPNEK 249
Query: 614 HFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRI 673
+L+ L ++ +VIVF +T + S + L +N ++ + Q R +
Sbjct: 250 KAAVLYTLKSRNL-----SQVIVFVNTKIGASRVARELVSEGINAESIHGDRSQAERIKA 304
Query: 674 SEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVL 733
E F++ + +LV +DV+ARG+D + V+ + +P + E Y+HR+GRTGR G +GE +
Sbjct: 305 LEGFKSGEIAVLVATDVAARGLDVVGLPCVINMDLPYNAEDYVHRIGRTGRAGAKGEAIA 364
Query: 734 LLAPWEEYFLDDLKDL 749
EE L+D++ L
Sbjct: 365 FYTQTEERLLEDIEKL 380
>gi|406865242|gb|EKD18284.1| ATP-dependent RNA helicase DBP4 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 1104
Score = 219 bits (558), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 155/486 (31%), Positives = 248/486 (51%), Gaps = 45/486 (9%)
Query: 371 EEEPILSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKS 430
E +P K F +S T L + + +T +Q + L+GKD + AKTG+GK+
Sbjct: 41 ELDPKAEVKEFSNLPLSKPTSSGLEVSHFKTLTDIQSKAVPLALKGKDILGAAKTGSGKT 100
Query: 431 IAFLLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTL 490
+AFL+P +E + + + L LI+ PTRELA+QI + +NH L +
Sbjct: 101 LAFLIPVLENLYRQKWTEMDGL----GALIISPTRELATQIFQVLRKIGRNHSFSAGL-I 155
Query: 491 VGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLG 550
+GG + ++ RL ILV TPGR+L H++ + V L+MLVLDEAD ++D+G
Sbjct: 156 IGGRSLQEERERLGR--MNILVCTPGRILQHMDQTADFDVS--HLQMLVLDEADRIMDMG 211
Query: 551 FRKDVENIVDCLPRRRQSLLFSATMPKEL-----VLKREHTYIDTVGLGSVETPVKIKQS 605
F++DV+ IV+ LP+ RQ++LFSAT K++ + R+ Y+ + TP ++Q
Sbjct: 212 FQRDVDAIVEHLPKERQTMLFSATQTKKVSDLARLSLRDPEYVAVHEAATSATPTTLQQY 271
Query: 606 CLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK--MNVREMYS 663
+V P L ++ ++ K+IVF S+G +Y R M+ + + ++
Sbjct: 272 VVVTPLAEKLNTLFSFIRNNLKA----KIIVFMSSGKQVRFIYESFRHMQPGIPLLHLHG 327
Query: 664 RKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTG 723
R+ Q R I+ +F +SK + +DV ARG+D+P V V+Q+ P D + YIHR+GRT
Sbjct: 328 RQKQSARLDITSKFSSSKNSCIFATDVVARGLDFPAVDWVIQLDCPEDADTYIHRVGRTA 387
Query: 724 REGKEGEGVLLLAPWEEYFLDDLKDLPLDKLQLPHLNPEIQLQMDNHMAKIDNNVKEAAY 783
R + G+ VL L P EE + LK L K+ + P +LQ I N +++ +
Sbjct: 388 RYERAGKAVLFLDPSEEEGM--LKRLEHKKVPIQKTKPRQKLQQ-----SIKNQLQDMCF 440
Query: 784 HAWLGYYNSIREIGRDKTTLVELANKFAQSIGLQRPPPLFRKT-------ALKMGLKDIP 836
Y I+ +G+ T +A+SI LQ+ F+ A MGL P
Sbjct: 441 K-----YPEIKYLGQKAFT------SYAKSIYLQKDKETFKINEYDLEGFADSMGLPGAP 489
Query: 837 GIRLRK 842
I+ +K
Sbjct: 490 KIKFQK 495
>gi|193652513|ref|XP_001948824.1| PREDICTED: probable ATP-dependent RNA helicase DDX10-like
[Acyrthosiphon pisum]
Length = 786
Score = 219 bits (557), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 157/470 (33%), Positives = 253/470 (53%), Gaps = 28/470 (5%)
Query: 364 GEKKEKREEEPILSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKA 423
G+ KE E+ + ++F+ +S T+K L Y T +Q ++ L G+D + A
Sbjct: 25 GKLKESYEQIDPNAIEKFEHFPLSAPTLKGLKDNKYFVPTEIQRESIGYSLRGEDILGAA 84
Query: 424 KTGTGKSIAFLLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHD 483
KTG+GK++AFL+P +E + + T L LI+ PTRELA QI E + + H
Sbjct: 85 KTGSGKTLAFLIPVLEILYCNKWNRTEGLA----ALIITPTRELAYQIF-ETLRKIGIHH 139
Query: 484 GIGVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEA 543
++GG K +++RL D C I++ TPGRLL H++ + +LVLDEA
Sbjct: 140 DFSAGLIIGGKDLKFERKRL--DQCNIMICTPGRLLQHMDENPLFDCS--NMLVLVLDEA 195
Query: 544 DHLLDLGFRKDVENIVDCLPRRRQSLLFSATMPK---ELV-LKREHTYIDTVGLGSVE-T 598
D LD+GF++ + +I++ LP RQ+LLFSAT K +LV L + ++ +V S T
Sbjct: 196 DRCLDMGFQQTMNSIIENLPPERQTLLFSATQTKSVKDLVRLSLSNPHLISVHEDSEHST 255
Query: 599 PVKIKQSCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK--M 656
P + QS +V +L +K H+ +KV+VF S+ Y +L +++
Sbjct: 256 PSGLVQSYMVCDLHDKMSLLWSFIKNHL----HHKVLVFMSSCKQVKYFYEILCKLRPGT 311
Query: 657 NVREMYSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYI 716
++ +Y Q R + E F +R +L +D++ARG+D+P V VVQ+ P + +YI
Sbjct: 312 SLLALYGTMHQTKRMAVYESFSRKQRSVLFATDIAARGLDFPAVNWVVQLDCPENANEYI 371
Query: 717 HRLGRTGREGKEGEGVLLLAPWEEYFLDDL--KDLPLDKLQL-PHLNPEIQLQMDNHMAK 773
HR GRT R K GE +L+L P E L L K +P+ ++++ P+ IQ ++ +AK
Sbjct: 372 HRAGRTARFQKSGESLLVLLPSELAILKQLENKKIPISEIKVNPNKLTSIQRTLEATLAK 431
Query: 774 IDNNVKEAAYHAWLGYYNSIREIGRDKTTLVELA---NKFAQSIGLQRPP 820
D+ +KE+A A++ Y S+ + +DK+ A + FA S+GL PP
Sbjct: 432 -DHILKESAQRAFVSYIKSVF-LMKDKSVFDVSALDTDSFASSLGLAIPP 479
>gi|344300784|gb|EGW31105.1| ATP-dependent RNA helicase HAS1 [Spathaspora passalidarum NRRL
Y-27907]
Length = 560
Score = 219 bits (557), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 174/522 (33%), Positives = 275/522 (52%), Gaps = 63/522 (12%)
Query: 337 SLEDEHDFEEQVELIRKEISKNKLNGNGEKKEKREEEPILSQKR---------------- 380
+ E + DF+E L+ ++I + + ++K K EEP + +
Sbjct: 41 TAEVDADFDEVANLLGQDIK----DPDAKRKSKAVEEPAIPEYTPVESSDKSKEENEEDV 96
Query: 381 -FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIE 439
F + +S T+KA+T G+ +MT+VQ T+ L G+D + AKTG+GK++AFL+PAIE
Sbjct: 97 FFKDAELSEPTMKAITEMGFTKMTKVQAKTIPPLLAGRDVLGAAKTGSGKTLAFLIPAIE 156
Query: 440 AV--LKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHD-GIGVLTLVGGTRF 496
+ LK + T V+I+ PTRELA QI A L+++H G++ +GG
Sbjct: 157 LLHSLKIKPRNGTA------VIIITPTRELALQIFGVARQLMEHHSQTCGIV--IGGADR 208
Query: 497 KVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVE 556
+ + +L +LVATPGRLLDH++N G LK LV+DEAD +L++GF +++
Sbjct: 209 RAEAVKL-GKGVNLLVATPGRLLDHLKNTPGFVFN--NLKALVIDEADRILEIGFEDEMK 265
Query: 557 NIVDCLPRR-RQSLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSCLVA 609
I+ LP RQS+LFSAT + + L+ YI+ V V T ++Q +V
Sbjct: 266 QIIKILPNENRQSMLFSATQTTKVEDLARISLRPGPLYINVVPETDVSTADGLEQGYVVC 325
Query: 610 PHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLY 669
+ F +L LK +I K+IVF S+ LL + + V +++ ++ Q
Sbjct: 326 DSDKRFLLLFSFLKRNI----KKKIIVFLSSCNSVKFYSELLNYIDLPVLDLHGKQKQQK 381
Query: 670 RDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEG 729
R EF +K+ ILV +DV+ARG+D P V ++Q P D YIHR+GRT R G +G
Sbjct: 382 RTNTFFEFCNAKQGILVCTDVAARGLDIPAVDWIIQFDPPDDPRDYIHRVGRTAR-GTQG 440
Query: 730 EG--VLLLAPWEEYFLDDLK--DLPLDKLQLPHLN-PEIQLQMDNHMAKIDNNVKEAA-- 782
+G ++ L P E FL LK ++PL++ + P IQ Q+ + K + + ++A
Sbjct: 441 KGKSLMFLTPSELGFLRYLKAANVPLNEFEFPSNKIANIQSQL-VKLIKTNYLLHQSAKD 499
Query: 783 -YHAWLGYY--NSIREIGR-DKTTLVELANKFAQSIGLQRPP 820
Y A+L Y +S++ + + DK LV K +S G + PP
Sbjct: 500 GYRAYLQAYASHSLKTVYQIDKLDLV----KVGKSFGFEVPP 537
>gi|384495140|gb|EIE85631.1| ATP-dependent RNA helicase HAS1 [Rhizopus delemar RA 99-880]
Length = 502
Score = 219 bits (557), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 159/446 (35%), Positives = 235/446 (52%), Gaps = 36/446 (8%)
Query: 392 KALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVL--KATSSST 449
KA+ G+ QMT VQ T+ A LEGKD + AKTG+GK++AFL+PAIE ++ K S
Sbjct: 66 KAIKEMGFTQMTEVQAKTIPALLEGKDVLGAAKTGSGKTLAFLIPAIELLVRQKFKSRHG 125
Query: 450 TQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDP-- 507
T +V ++ PTRELA QI L K + I ++GG R+ ESD
Sbjct: 126 TGIV------VVSPTRELAIQIYGVVEELCK-YVQISHGIVIGGA-----NRKAESDKLM 173
Query: 508 --CQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRR 565
+LVATPGRLLDH++N G L+ LV+DEAD +L++GF ++++ I+ LP
Sbjct: 174 KGVNLLVATPGRLLDHLQNTQGFIFN--RLQALVIDEADRILEIGFEEEMKQILKILPTE 231
Query: 566 RQSLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILH 619
RQS+LFSAT + L LK + YI+ T ++Q + + F +L
Sbjct: 232 RQSMLFSATQTNKVSDLAKLSLKGDPVYINVDEQKDTSTADGLEQGFVTVDGDKRFLLLF 291
Query: 620 HLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEFRA 679
L+++ KVIVF S+ LL + + V E++ R+ Q R +F
Sbjct: 292 TFLRKN----QKKKVIVFFSSCNAVKYYSELLNYIDVPVMELHGRQKQQKRTTTFFDFCN 347
Query: 680 SKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLAPWE 739
+++ IL+ +DV+ARG+D PDV +VQ P D YIHR+GRT R G +G +L L P E
Sbjct: 348 AEKGILLCTDVAARGLDIPDVDWIVQFDPPDDPRDYIHRVGRTARAGGKGRSLLFLLPTE 407
Query: 740 EYFLDDLKD--LPLDKLQLPHLN-PEIQLQMDNHMAK--IDNNVKEAAYHAWLGYYNSIR 794
FL LK+ +PL++ Q P +Q Q++ + K N A+ ++L Y +
Sbjct: 408 TGFLKYLKEAKVPLNEYQFPTSKIANVQSQLEQLIEKNFYLNQSARDAFRSYLQSYATYH 467
Query: 795 EIGRDKTTLVELANKFAQSIGLQRPP 820
++LA K A+S G + PP
Sbjct: 468 LKSIFDVNKLDLA-KIAKSFGFKVPP 492
>gi|327260241|ref|XP_003214943.1| PREDICTED: ATP-dependent RNA helicase DDX18-like [Anolis
carolinensis]
Length = 666
Score = 219 bits (557), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 158/457 (34%), Positives = 245/457 (53%), Gaps = 45/457 (9%)
Query: 386 ISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKAT 445
IS T+K +T G+ MT +Q ++ LEG+D + AKTG+GK++AFL+PAIE + K
Sbjct: 181 ISENTLKGITEMGFTHMTEIQHKSIKPLLEGRDILAAAKTGSGKTLAFLIPAIELIYK-- 238
Query: 446 SSSTTQLVP--PIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRL 503
+ +P VLIL PTRELA Q L+ +H L + GG+ + +RL
Sbjct: 239 ----LKFMPRNGTGVLILSPTRELAMQTYGVLKELMTHHVHTYGLVM-GGSNRSAEAQRL 293
Query: 504 ESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLP 563
+ I+VATPGRLLDH++N G + L+ LV+DEAD +L++GF ++++ I+ LP
Sbjct: 294 -GNGINIIVATPGRLLDHMQNTPGFMYK--NLQCLVIDEADRILEVGFEEEMKQIIKLLP 350
Query: 564 RRRQSLLFSATMPK------ELVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQI 617
+RRQ++LFSAT + ++ LK+E Y+ T ++Q +V P E F +
Sbjct: 351 KRRQTMLFSATQTRKVEDLAKISLKKEPLYVGVDDNKETATVEGLEQGYVVCPSEKRFLL 410
Query: 618 LHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEF 677
L LK++ K++VF S+ M Y LL + + V ++ ++ Q R +F
Sbjct: 411 LFTFLKKN----RKKKLMVFFSSCMSVKYHYELLNYIDLPVLAIHGKQKQTKRTTTFFQF 466
Query: 678 RASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEG--VLLL 735
+ IL+ +DV+ARG+D P+V +VQ P D ++YIHR+GRT R G G G +L+L
Sbjct: 467 CNADSGILLCTDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTAR-GINGRGHALLIL 525
Query: 736 APWEEYFLDDLKD--LPLDKLQLPHLN-PEIQLQMDNHMAK--IDNNVKEAAYHAWLGYY 790
P E FL LK +PL++ + +IQ Q++ + K + + AY A++ Y
Sbjct: 526 RPEELGFLRYLKQARVPLNEFEFSWSKISDIQSQLEKLIEKNYFLHKSAQEAYKAYIRAY 585
Query: 791 NSIREIGRDKTTLVELAN-------KFAQSIGLQRPP 820
D +L E+ N K A S G + PP
Sbjct: 586 --------DSHSLKEIYNVNNLDLLKVALSFGFKVPP 614
>gi|325094386|gb|EGC47696.1| ATP-dependent RNA helicase DBP4 [Ajellomyces capsulatus H88]
Length = 811
Score = 219 bits (557), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 153/473 (32%), Positives = 245/473 (51%), Gaps = 34/473 (7%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F + +S T L+A + +T +Q + L+G+D + AKTG+GK++AFL+P +E
Sbjct: 51 FSDLPLSEPTADGLSAGHFKSLTDIQARAIPYALKGRDILGAAKTGSGKTLAFLVPLLEL 110
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+ + + L L+L PTRELA QI E + + H ++GG + +Q
Sbjct: 111 LYRKQWTEYDGL----GALVLSPTRELAIQIF-EVLRKIGRHHTFSAGLVIGGKGLQEEQ 165
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
RL ILV TPGR+L H++ + +++LVLDEAD ++D+GF+ V+ I+D
Sbjct: 166 ERLGK--MNILVCTPGRMLQHMDQTAAFDTN--HIQLLVLDEADRIMDMGFQSTVDAIID 221
Query: 561 CLPRRRQSLLFSATMPKEL-----VLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHF 615
LP+ RQ++LFSAT K++ + R+ Y+ + TP K++Q+ ++ P
Sbjct: 222 HLPKERQTMLFSATQTKKVSDLARLSLRDPEYVSVHETAASATPAKLQQNYIITPLPEKL 281
Query: 616 QILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNV--REMYSRKPQLYRDRI 673
L ++ + K+IVF S+G +Y R M+ + ++ R+ Q R I
Sbjct: 282 DTLWSFIRSSLKS----KIIVFFSSGKQVRFVYESFRHMRPGIPLLHLHGRQKQGARVDI 337
Query: 674 SEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVL 733
+++F A+K L +D++ARG+D+P V V+QV P D + YIHR GRT R + G VL
Sbjct: 338 TKKFSAAKYACLFATDIAARGLDFPAVDWVIQVDCPEDADTYIHRAGRTARYERNGRAVL 397
Query: 734 LLAPWEEYFLDDLKDLPLDKLQLPHLN------PEIQLQMDNHMAKIDNNVKEAAYHAWL 787
L P EE + LK L K+ + +N I+ Q+ N M D ++K A++
Sbjct: 398 FLEPSEEAGM--LKRLEQKKIPIEKINVRSKKQQSIKNQLQN-MCFKDPSLKYLGQKAFI 454
Query: 788 GYYNSIREIGRDKTTLV--ELA-NKFAQSIGLQRPPPL-FRKTALKMGLKDIP 836
Y SI + RDK V +L ++A S+GL P + F K LK+ P
Sbjct: 455 SYVKSIH-VQRDKEVFVVKDLPLQEYAASLGLPGAPRIKFIKGEDSKKLKNAP 506
>gi|169773163|ref|XP_001821050.1| ATP-dependent RNA helicase dbp4 [Aspergillus oryzae RIB40]
gi|238491114|ref|XP_002376794.1| DEAD box RNA helicase (Hca4), putative [Aspergillus flavus
NRRL3357]
gi|91206545|sp|Q2UHB7.1|DBP4_ASPOR RecName: Full=ATP-dependent RNA helicase dbp4
gi|83768911|dbj|BAE59048.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220697207|gb|EED53548.1| DEAD box RNA helicase (Hca4), putative [Aspergillus flavus
NRRL3357]
Length = 796
Score = 219 bits (557), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 153/458 (33%), Positives = 240/458 (52%), Gaps = 33/458 (7%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
K F + +S T L ++ + +T +Q + L+G+D + AKTG+GK++AFL+P +
Sbjct: 45 KSFSDLPLSEPTASGLASSHFKTLTDIQSRAIGHALKGRDILGAAKTGSGKTLAFLIPVL 104
Query: 439 EAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
E + + S L LIL PTRELA QI E + + + ++GG K
Sbjct: 105 ENLYRKQWSEHDGLG----ALILSPTRELAIQIF-EVLRKIGRYHTFSAGLIIGGKSLKE 159
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
+Q RL ILV TPGR+L H++ + V L+MLVLDEAD +LD+GF+K V+ I
Sbjct: 160 EQERLGR--MNILVCTPGRMLQHLDQTAMFDV--FNLQMLVLDEADRILDMGFQKTVDAI 215
Query: 559 VDCLPRRRQSLLFSATMPKEL-----VLKREHTYIDTVGLGSVETPVKIKQSCLVAPHEL 613
V LP+ RQ+LLFSAT K++ + ++ Y+ S TP ++Q +V P
Sbjct: 216 VGHLPKERQTLLFSATQTKKVSDLARLSLQDPEYVAVHETASSATPSTLQQHYVVTPLSQ 275
Query: 614 HFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK--MNVREMYSRKPQLYRD 671
+L ++ ++ K IVF S+G +Y R ++ + + ++ R+ Q R
Sbjct: 276 KLDVLWSFIRSNLKA----KTIVFLSSGKQVRFVYESFRHLQPGIPLMHLHGRQKQGGRL 331
Query: 672 RISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEG 731
I+ +F +K +L ++D++ARG+D+P V V+Q+ P D + YIHR+GRT R ++G
Sbjct: 332 DITAKFSQAKHAVLFSTDITARGLDFPAVDWVIQMDCPEDADTYIHRVGRTARYERDGRA 391
Query: 732 VLLLAPWEEYFLDDLKDLPLDKLQLPHLN------PEIQLQMDNHMAKIDNNVKEAAYHA 785
VL L P EE + LK L K+ + +N I+ Q+ N M D +K A
Sbjct: 392 VLFLDPSEESGM--LKRLEQKKVPIERINIKANKQQSIRDQLQN-MCFKDPELKYLGQKA 448
Query: 786 WLGYYNSIREIGRDKTT--LVELA-NKFAQSIGLQRPP 820
++ Y S+ + +DK L EL FA S+GL P
Sbjct: 449 FISYVKSVY-VQKDKEVFKLKELKLEDFASSLGLPGAP 485
>gi|391865882|gb|EIT75161.1| RNA Helicase [Aspergillus oryzae 3.042]
Length = 796
Score = 219 bits (557), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 153/458 (33%), Positives = 240/458 (52%), Gaps = 33/458 (7%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
K F + +S T L ++ + +T +Q + L+G+D + AKTG+GK++AFL+P +
Sbjct: 45 KSFSDLPLSEPTASGLASSHFKTLTDIQSRAIGHALKGRDILGAAKTGSGKTLAFLIPVL 104
Query: 439 EAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
E + + S L LIL PTRELA QI E + + + ++GG K
Sbjct: 105 ENLYRKQWSEHDGLG----ALILSPTRELAIQIF-EVLRKIGRYHTFSAGLIIGGKSLKE 159
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
+Q RL ILV TPGR+L H++ + V L+MLVLDEAD +LD+GF+K V+ I
Sbjct: 160 EQERLGR--MNILVCTPGRMLQHLDQTAMFDV--FNLQMLVLDEADRILDMGFQKTVDAI 215
Query: 559 VDCLPRRRQSLLFSATMPKEL-----VLKREHTYIDTVGLGSVETPVKIKQSCLVAPHEL 613
V LP+ RQ+LLFSAT K++ + ++ Y+ S TP ++Q +V P
Sbjct: 216 VGHLPKERQTLLFSATQTKKVSDLARLSLQDPEYVAVHETASSATPSTLQQHYVVTPLSQ 275
Query: 614 HFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK--MNVREMYSRKPQLYRD 671
+L ++ ++ K IVF S+G +Y R ++ + + ++ R+ Q R
Sbjct: 276 KLDVLWSFIRSNLKA----KTIVFLSSGKQVRFVYESFRHLQPGIPLMHLHGRQKQGGRL 331
Query: 672 RISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEG 731
I+ +F +K +L ++D++ARG+D+P V V+Q+ P D + YIHR+GRT R ++G
Sbjct: 332 DITAKFSQAKHAVLFSTDITARGLDFPAVDWVIQMDCPEDADTYIHRVGRTARYERDGRA 391
Query: 732 VLLLAPWEEYFLDDLKDLPLDKLQLPHLN------PEIQLQMDNHMAKIDNNVKEAAYHA 785
VL L P EE + LK L K+ + +N I+ Q+ N M D +K A
Sbjct: 392 VLFLDPSEESGM--LKRLEQKKVPIERINIKANKQQSIKDQLQN-MCFKDPELKYLGQKA 448
Query: 786 WLGYYNSIREIGRDKTT--LVELA-NKFAQSIGLQRPP 820
++ Y S+ + +DK L EL FA S+GL P
Sbjct: 449 FISYVKSVY-VQKDKEVFKLKELKLEDFASSLGLPGAP 485
>gi|322796780|gb|EFZ19207.1| hypothetical protein SINV_02979 [Solenopsis invicta]
Length = 605
Score = 219 bits (557), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 153/450 (34%), Positives = 253/450 (56%), Gaps = 35/450 (7%)
Query: 390 TIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSST 449
T+KA+ G+ MT +Q ++ LEG+D V AKTG+GK++AFL+PA+E + K
Sbjct: 104 TLKAIKDMGFTNMTEIQAKSIPPLLEGRDLVGAAKTGSGKTLAFLIPAVELIYKL----- 158
Query: 450 TQLVP--PIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDP 507
+ +P V+I+ PTREL+ Q L+K H L L+GG + + ++L +
Sbjct: 159 -KFMPRNGTGVIIMSPTRELSMQTFGVLKELMKYHYHTYGL-LMGGASRQTEAQKL-AKG 215
Query: 508 CQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQ 567
I+VATPGRLLDH++N + L+ LV+DEAD +LD+G+ ++++ I++ LP+RRQ
Sbjct: 216 VNIIVATPGRLLDHLQNTPDFLYK--NLQCLVIDEADRILDIGYEEELKQIINILPKRRQ 273
Query: 568 SLLFSAT------MPKELVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILHHL 621
++LFSAT M L LK+E Y+ + T ++Q + P E F +L
Sbjct: 274 TMLFSATQTQKVAMITTLALKKEPIYVGVDDDKEMATVEGLQQGYVACPSEKRFLLLFTF 333
Query: 622 LKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEFRASK 681
LK++ K++VF S+ M + LL + + V ++ ++ Q R +F +
Sbjct: 334 LKKN----RKKKIMVFFSSCMSVKFHHELLNYIDLPVMSIHGKQKQTKRTTTFYQFCNAS 389
Query: 682 RLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGR-EGKEGEGVLLLAPWEE 740
L+ +DV+ARG+D PDV +VQ P D ++YIHR+GRT R EG G +L+L P E
Sbjct: 390 TGTLLCTDVAARGLDIPDVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHALLILRPEEL 449
Query: 741 YFLDDLKD--LPLDKLQLP-HLNPEIQLQMDNHMAK---IDNNVKEAAYHAWLGYYNS-- 792
FL LK +P+++ + + +IQLQ++ ++K + + KE A+ ++ Y+S
Sbjct: 450 GFLRYLKQARVPVNEYEFSWNKIADIQLQLEKLISKNYFLHQSAKE-AFKNYVRAYDSHH 508
Query: 793 IREIGRDKTTLVELANKFAQSIGLQRPPPL 822
++++ +T ++LA K A+S G PP +
Sbjct: 509 LKQVFDIET--LDLA-KVAKSFGFIVPPAV 535
>gi|365984605|ref|XP_003669135.1| hypothetical protein NDAI_0C02320 [Naumovozyma dairenensis CBS 421]
gi|343767903|emb|CCD23892.1| hypothetical protein NDAI_0C02320 [Naumovozyma dairenensis CBS 421]
Length = 764
Score = 219 bits (557), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 149/462 (32%), Positives = 248/462 (53%), Gaps = 35/462 (7%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F + +SP T+K L A ++++T +Q ++ L+G D + AKTG+GK++AFL+P +E
Sbjct: 43 FKDLPLSPPTLKGLNGAAFLKLTDIQRESIPISLKGYDVLGSAKTGSGKTLAFLIPILEK 102
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+ + + + L++ PTRELA QI E + + + + ++GG K +
Sbjct: 103 LYREKWTE----FDGLGALVISPTRELAMQIY-EVLLKIGTYTSLSAGLVIGGKDVKFES 157
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
RL IL+ TPGR+L H++ +++ L+MLVLDEAD LD+GF+K ++ IV
Sbjct: 158 ERLSK--INILIGTPGRILQHLDQ--AIALNTSNLQMLVLDEADRCLDMGFKKTLDAIVS 213
Query: 561 CLPRRRQSLLFSATMPKELVLKREHTYIDTVGLGSVE-----------TPVKIKQSCLVA 609
LP RQ+LLFSAT + L + D +G+++ TP ++QS +
Sbjct: 214 NLPASRQTLLFSATQSQSLGDLARLSLTDYKTVGTMDPSKDKTDEGAATPKTLEQSYVET 273
Query: 610 PHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK--MNVREMYSRKPQ 667
IL+ +K H+ +K+IVF S+ +Y R+++ +++ ++ R+ Q
Sbjct: 274 ELADKLDILYSFIKSHL----KHKMIVFLSSSKQVHFVYETFRKLQPGISLMHLHGRQKQ 329
Query: 668 LYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGK 727
R ++F ++++ L +DV ARG+D+P V V+QV P D + YIHR+GR R GK
Sbjct: 330 KARTETLDKFSRAQQVCLFATDVVARGIDFPSVDWVIQVDCPEDADTYIHRVGRAARYGK 389
Query: 728 EGEGVLLLAPWE-EYFLDDL--KDLPLDKLQLPHLNPE-IQLQMDNHMAKIDNNVKEAAY 783
+G+ +++L P E E FL L K + L KL + + I+ Q+ + + K D +K
Sbjct: 390 KGKSLIMLTPQECEPFLKRLASKKIKLGKLTIKQAKKKSIKPQLQSLLFK-DPELKYLGQ 448
Query: 784 HAWLGYYNSIREIGRDKTT--LVELANK-FAQSIGLQRPPPL 822
A++ Y SI I +DK LA + FA S+GL P +
Sbjct: 449 KAFISYVRSIY-IQKDKEVFNFESLATEAFANSLGLPGAPKI 489
>gi|156049233|ref|XP_001590583.1| hypothetical protein SS1G_08323 [Sclerotinia sclerotiorum 1980]
gi|160380617|sp|A7ESL8.1|DBP4_SCLS1 RecName: Full=ATP-dependent RNA helicase dbp4
gi|154692722|gb|EDN92460.1| hypothetical protein SS1G_08323 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 808
Score = 219 bits (557), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 166/512 (32%), Positives = 265/512 (51%), Gaps = 44/512 (8%)
Query: 353 KEISKNKLNGNGEKKEKREEEPILSQK------------RFDECGISPLTIKALTAAGYI 400
K ISK K++ K+++ EE+ QK F E +S T L A+ +
Sbjct: 11 KNISKGKVDARTLKRKRVEEDLEKLQKSVDELDAKAEIKNFSELPLSGPTSSGLEASHFK 70
Query: 401 QMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLVPPIYVLI 460
+T VQ + L+GKD + AKTG+GK++AFL+P +E + + + L LI
Sbjct: 71 TLTDVQSKAVPLALKGKDILGAAKTGSGKTLAFLVPVLENLYRQKWTELDGL----GALI 126
Query: 461 LCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLD 520
+ PTRELA QI E + + + ++GG + ++ RL ILV TPGR+L
Sbjct: 127 ISPTRELAIQIF-EVLRKIGRYHTFSAGLIIGGRSLQEERERLGR--MNILVCTPGRMLQ 183
Query: 521 HIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQSLLFSATMPKEL- 579
H++ + V L+MLVLDEAD ++D+GF+ V+ I++ LP++RQ++LFSAT K++
Sbjct: 184 HMDQTAAFDVD--NLQMLVLDEADRIMDMGFQTSVDAILEHLPKQRQTMLFSATQTKKVS 241
Query: 580 ----VLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILHHLLKEHILGTPDYKVI 635
+ +E Y+ S TP ++Q V P L ++ ++ K+I
Sbjct: 242 DLARLSLKEPEYVAVHEAASSATPTTLQQHYCVVPLPEKLNTLFGFIRANLKA----KII 297
Query: 636 VFCSTGMVTSLLYLLLREMK--MNVREMYSRKPQLYRDRISEEFRASKRLILVTSDVSAR 693
VF S+G +Y LR ++ + + ++ R+ Q R I+ +F +SK + +DV AR
Sbjct: 298 VFMSSGKQVRFVYESLRHLQPGIPLLHLHGRQKQTARLDITSKFSSSKNSCIFATDVVAR 357
Query: 694 GMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLAPWEEY-FLDDL--KDLP 750
G+D+P V V+Q+ P D + YIHR+GRT R GK G VL L P EE L L K +P
Sbjct: 358 GLDFPAVDWVIQLDCPEDADTYIHRVGRTARYGKVGRAVLFLDPSEEEGMLKRLEHKKVP 417
Query: 751 LDKLQL-PHLNPEIQLQMDNHMAKIDNNVKEAAYHAWLGYYNSIREIGRDKTTL----VE 805
+ K+ + P+ +I+ Q+ N M D +K A++ Y S+ + +DK ++
Sbjct: 418 IQKINIRPNKTQDIKNQLQN-MCFQDPELKYLGQKAFVSYAKSVF-LQKDKEIFNINDID 475
Query: 806 LANKFAQSIGLQRPPPL-FRKTALKMGLKDIP 836
L +A SIGL P + F+K +K+ P
Sbjct: 476 LEG-YASSIGLPGAPKIKFQKGNDAKNVKNAP 506
>gi|302878537|ref|YP_003847101.1| DEAD/DEAH box helicase [Gallionella capsiferriformans ES-2]
gi|302581326|gb|ADL55337.1| DEAD/DEAH box helicase domain protein [Gallionella
capsiferriformans ES-2]
Length = 461
Score = 219 bits (557), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 140/384 (36%), Positives = 212/384 (55%), Gaps = 17/384 (4%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F + ++P ++AL +GY + T +Q + LEG D + A+TGTGK+ AF LP ++
Sbjct: 4 FADLNLAPEILRALIESGYTKPTPIQAQAIPLVLEGSDLMAGAQTGTGKTAAFALPVLQK 63
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
++ SSS + + LIL PTRELA Q+ A A K + + L + GG K
Sbjct: 64 LMPFASSSPSPARHAVRALILVPTRELAIQVEASVKAYAK-YSHLRSLVVFGGVDIKTQT 122
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
L + +ILVATPGRLLDHIE KS V+L ++MLVLDEAD +LD+GF D++ I+
Sbjct: 123 PHLRAG-IEILVATPGRLLDHIEQKS---VQLNQVQMLVLDEADRMLDMGFMPDLKRILA 178
Query: 561 CLPRRRQSLLFSATMPKELVLKREHTYIDTVGLGSVE----TPVKIKQSCLVAPHELHFQ 616
LPR+RQ+L+FSAT E + K ++ L V T + Q + HE
Sbjct: 179 LLPRQRQNLMFSATFSAE-IKKLSAEFLVNPKLIEVARSNATSENVTQKVYLVGHEEKHA 237
Query: 617 ILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEE 676
+L HLL+ GT + +VF T + S + L+ ++ K QL R + +
Sbjct: 238 LLAHLLR----GTGAVQTLVFTKTKLTASRIARQLQREGFASDAIHGDKSQLERMQALDA 293
Query: 677 FRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLA 736
F++ K +L+ +DV+ARG+D + V+ IP E Y+HR+GRTGR G G + L+A
Sbjct: 294 FKSGKITVLIATDVAARGLDIDQLPVVINYEIPSAAEDYVHRIGRTGRAGAFGVAISLVA 353
Query: 737 PWEEYFLDDLKDL---PLDKLQLP 757
P EE +L +++ L + +++LP
Sbjct: 354 PEEEKYLLEIEKLIKCTIQRVELP 377
>gi|52143016|ref|YP_083814.1| ATP-dependent RNA helicase [Bacillus cereus E33L]
gi|51976485|gb|AAU18035.1| ATP-dependent RNA helicase [Bacillus cereus E33L]
Length = 450
Score = 219 bits (557), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 137/373 (36%), Positives = 201/373 (53%), Gaps = 21/373 (5%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
K F E GIS L G + T +QE + L GKD + +AKTGTGK++AF+LP +
Sbjct: 5 KNFLELGISETFNHTLRENGITEATPIQEKAIPVILSGKDIIGQAKTGTGKTLAFVLPIL 64
Query: 439 EAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
E + +S + LI+ PTRELA QI E +L + I VL + GG
Sbjct: 65 EKIDPESSD--------VQALIVAPTRELALQITTEIKKMLVQREDINVLAIYGGQDVAQ 116
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
R+L+ + I+VATPGRLLDHI ++ + L L +VLDEAD +L GF D+E+I
Sbjct: 117 QLRKLKGN-THIVVATPGRLLDHIRRET---IDLSNLSTIVLDEADQMLYFGFLYDIEDI 172
Query: 559 VDCLPRRRQSLLFSATMPKELVLKREHTYID---TVGLGSVETPVK-IKQSCLVAPHELH 614
+D P +Q++LFSATMPK+ + K Y+D + + S E V I+Q +
Sbjct: 173 LDETPGSKQTMLFSATMPKD-IKKLAKRYMDEPQMIQVQSEEVTVNTIEQRVIETTDRAK 231
Query: 615 FQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRIS 674
L ++ + ++FC T + S LY L+ + N E++ PQ R+R+
Sbjct: 232 PDALRFVMDRD----QPFLAVIFCRTKVRASKLYDNLKGLGYNCAELHGDIPQAKRERVM 287
Query: 675 EEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLL 734
+ FR +K L+ +DV+ARG+D VT V IP D E YIHR+GRTGR G G +
Sbjct: 288 KSFREAKIQYLIATDVAARGLDVDGVTHVFNYDIPEDVESYIHRIGRTGRAGGSGLAITF 347
Query: 735 LAPWEEYFLDDLK 747
+A +E L++++
Sbjct: 348 VAAKDEKHLEEIE 360
>gi|336270464|ref|XP_003349991.1| hypothetical protein SMAC_00881 [Sordaria macrospora k-hell]
gi|380095382|emb|CCC06855.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 626
Score = 218 bits (556), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 166/488 (34%), Positives = 253/488 (51%), Gaps = 44/488 (9%)
Query: 385 GISPLTIKALT-AAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLK 443
G+ ++A+T GY MT VQ T+S L+GKD V +AKTGTGK++ FL+P I+ ++
Sbjct: 80 GVHENVVRAITHGMGYENMTEVQSMTISPALKGKDIVAQAKTGTGKTLGFLVPVIQKIVA 139
Query: 444 ATSSSTTQL------VPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFK 497
+ + I +++ PTRELA QI EA L+K G+ V T VGGT+ +
Sbjct: 140 QDPALADRFGGRRARSDDIRAIVISPTRELAEQIGEEARKLVKG-TGVIVQTAVGGTQKR 198
Query: 498 VDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVEN 557
+ C ILV TPGRL D + + + + L+ LVLDEAD +L++GF +++
Sbjct: 199 EMLYKTRQQGCHILVGTPGRLNDLLSDSTS-GIDAPRLQTLVLDEADRMLEVGFDEELRQ 257
Query: 558 IVDCLPRR----RQSLLFSATMPKELV-LKREHT------YIDTVGLGSVETPVKIKQSC 606
I++ LP R RQ+LLFSAT+PK++V L R + ++ TV V T +I Q
Sbjct: 258 IINYLPDRKVLPRQTLLFSATIPKDVVGLARSYIDKNNFEFVQTVKADEVLTHDRIPQYI 317
Query: 607 L-VAPHELHFQILHHLLKEHI---LGTPD---YKVIVFCSTGMVTSLLYLLLREMKMNVR 659
+ E + + L+++ I PD +K IVF T + + R ++ R
Sbjct: 318 VPCKGFENIYPTMLELVEKAINESRTNPDALPFKAIVFLPTTAEVIMANAIFRRLQWKFR 377
Query: 660 ------EMYSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDRE 713
+++S+ Q R R ++EF+ + IL +SDV+ARGMD+P+V+ V+Q+ PP+RE
Sbjct: 378 HIPKTWDIHSKLTQNARTRAADEFKRATTGILFSSDVTARGMDFPNVSHVIQLHTPPNRE 437
Query: 714 QYIHRLGRTGREGKEGEGVLLLAPWEEYFL-DDLKDLPL---DKLQLPHLNP-----EIQ 764
QYIHRLGRTGR K G+G L++ E L LP+ D+LQ +N E+
Sbjct: 438 QYIHRLGRTGRANKSGQGWLIVPDLELSMARSRLPGLPIKRNDELQCASVNAADTGKELP 497
Query: 765 LQMDNHMAKIDNNVKEAAYHAWLGYYNSIREIGRDKTTLVELANKFAQ-SIGLQRPPPLF 823
H+ + + + E + Y G D+ LV N A+ GL PP +
Sbjct: 498 ANF-QHILEATSRLPEELFKDCYSSYLGGALQGIDRQGLVYALNDLAKHGWGLPEPPAVR 556
Query: 824 RKTALKMG 831
+ MG
Sbjct: 557 QSIVKHMG 564
>gi|240275036|gb|EER38551.1| ATP-dependent RNA helicase DBP4 [Ajellomyces capsulatus H143]
Length = 811
Score = 218 bits (556), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 153/473 (32%), Positives = 245/473 (51%), Gaps = 34/473 (7%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F + +S T L+A + +T +Q + L+G+D + AKTG+GK++AFL+P +E
Sbjct: 51 FSDLPLSEPTADGLSACHFKSLTDIQARAIPYALKGRDILGAAKTGSGKTLAFLVPLLEL 110
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+ + + L L+L PTRELA QI E + + H ++GG + +Q
Sbjct: 111 LYRKQWTEYDGL----GALVLSPTRELAIQIF-EVLRKIGRHHTFSAGLVIGGKGLQEEQ 165
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
RL ILV TPGR+L H++ + +++LVLDEAD ++D+GF+ V+ I+D
Sbjct: 166 ERLGK--MNILVCTPGRMLQHMDQTAAFDTN--HIQLLVLDEADRIMDMGFQSTVDAIID 221
Query: 561 CLPRRRQSLLFSATMPKEL-----VLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHF 615
LP+ RQ++LFSAT K++ + R+ Y+ + TP K++Q+ ++ P
Sbjct: 222 HLPKERQTMLFSATQTKKVSDLARLSLRDPEYVSVHETAASATPAKLQQNYIITPLPEKL 281
Query: 616 QILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNV--REMYSRKPQLYRDRI 673
L ++ + K+IVF S+G +Y R M+ + ++ R+ Q R I
Sbjct: 282 DTLWSFIRSSLKS----KIIVFFSSGKQVRFVYESFRHMRPGIPLLHLHGRQKQGARVDI 337
Query: 674 SEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVL 733
+++F A+K L +D++ARG+D+P V V+QV P D + YIHR GRT R + G VL
Sbjct: 338 TKKFSAAKYACLFATDIAARGLDFPAVDWVIQVDCPEDADTYIHRAGRTARYERNGRAVL 397
Query: 734 LLAPWEEYFLDDLKDLPLDKLQLPHLN------PEIQLQMDNHMAKIDNNVKEAAYHAWL 787
L P EE + LK L K+ + +N I+ Q+ N M D ++K A++
Sbjct: 398 FLEPSEEAGM--LKRLEQKKIPIEKINVRSKKQQSIKNQLQN-MCFKDPSLKYLGQKAFI 454
Query: 788 GYYNSIREIGRDKTTLV--ELA-NKFAQSIGLQRPPPL-FRKTALKMGLKDIP 836
Y SI + RDK V +L ++A S+GL P + F K LK+ P
Sbjct: 455 SYVKSIH-VQRDKEVFVVKDLPLQEYAASLGLPGAPRIKFIKGEDSKKLKNAP 506
>gi|187479233|ref|YP_787258.1| ATP-dependent RNA helicase [Bordetella avium 197N]
gi|115423820|emb|CAJ50371.1| putative ATP-dependent RNA helicase [Bordetella avium 197N]
Length = 477
Score = 218 bits (556), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 140/390 (35%), Positives = 207/390 (53%), Gaps = 27/390 (6%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F + G+ PL +K++ GY T +Q + EG+D + A+TGTGK+ AF LP +
Sbjct: 17 FADFGLHPLLLKSIAETGYTSPTPIQAQAIPVVAEGRDVMGAAQTGTGKTAAFTLPILHR 76
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
++ +SS + P+ LIL PTRELA Q+ E + H + + GG +
Sbjct: 77 LMPLANSSASPARHPVRALILTPTRELADQVY-ENVKRYSLHTPLRSAVVFGGVDIGPQK 135
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
L C++LVATPGRLLDH+E K+ V L + +LVLDEAD +LD+GF D+E I+
Sbjct: 136 EALRQG-CEVLVATPGRLLDHVEQKN---VNLSQVGILVLDEADRMLDMGFLPDLERIIR 191
Query: 561 CLPRRRQSLLFSATMPKELVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILHH 620
LP +RQ LLFSAT E I +G + PV+I+ + A + QI +
Sbjct: 192 LLPPQRQGLLFSATFSNE---------IRKLGRSYLNQPVEIEVAARNATADTVTQIAYQ 242
Query: 621 LLKE-------HILGTPDYK-VIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDR 672
+ E H++ + K VIVF +T + T+ L L + ++ K Q R +
Sbjct: 243 MTGEAKRAAVVHLVKSRGLKQVIVFSNTKIGTARLARQLELDGVKAESIHGDKSQADRMK 302
Query: 673 ISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGV 732
E F+A + +LV +DV+ARG+D V V+ +P + E Y+HR+GRTGR G GE +
Sbjct: 303 ALEAFKAGELEVLVATDVAARGLDVAGVPCVINYDLPYNAEDYVHRIGRTGRAGASGEAI 362
Query: 733 LLLAPWEEYFLDDLKDL-----PLDKLQLP 757
L P EE +L D++ L P KL +P
Sbjct: 363 ALFTPEEERYLLDIEKLIKRQVPRGKLDIP 392
>gi|403417303|emb|CCM04003.1| predicted protein [Fibroporia radiculosa]
Length = 708
Score = 218 bits (556), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 167/452 (36%), Positives = 230/452 (50%), Gaps = 66/452 (14%)
Query: 386 ISPLTIKALTAA--GYIQMTRVQEATLSACLE-------------GKDAVVKAKTGTGKS 430
+SP T+KA+T M+ VQ A L + +D +V+AKTGTGK+
Sbjct: 80 VSPGTLKAITGHPLHLKNMSPVQAAVLPLMSDLTKPYDPKDESNTPRDLLVRAKTGTGKT 139
Query: 431 IAFLLPAIEAVLKATSSSTTQLVPP---------------------IYVLILCPTRELAS 469
+AFL+P IEA LK ++ Q V + LI+ PTRELA+
Sbjct: 140 LAFLVPVIEARLKVLAAHGRQAVKDAGLVNDKHLEIRARRLFAREHVGALIISPTRELAT 199
Query: 470 QIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLS 529
QIA EA+ L +HD + V LVGG R I+V TPGRL D +EN+ +
Sbjct: 200 QIANEALRLSHHHDDMEVRLLVGGNSKGKQLRDWMRGRRDIVVGTPGRLRDLLENEPDVK 259
Query: 530 VRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPR--RRQSLLFSATMPKEL------VL 581
+ +LVLDEAD LLD+GFR D++ I++ LP +RQ+ L SAT+ + L
Sbjct: 260 KGMENTHILVLDEADTLLDMGFRDDIDAILEHLPSGPKRQTFLLSATVSTNIRQVARAAL 319
Query: 582 KREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILHHL---LKEHILGTPDYKVIVFC 638
++H +ID V + T + Q V P Q+ H L + +L K IVF
Sbjct: 320 DKKHLFIDCVTDDAPPTHAHVPQYHTVLP-SAGMQLPHLLGLLAHDQLLNPGKSKAIVFL 378
Query: 639 STGMVTSLLYLLLREMK---------MNVREMYSRKPQLYRDRISEEFRASKR-LILVTS 688
T +T L L+R++ V EM+S Q RD S FRAS ILVTS
Sbjct: 379 PTTKMTQLFATLVRQLARTCLPAGKATEVYEMHSLLSQPRRDLTSNRFRASTSPSILVTS 438
Query: 689 DVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKE--GEGVLLLAPWEEYFLD-D 745
DVSARG+DYP VT +VQ+GIP +QY+HR+GRTGR G++ G L+L PWE F+
Sbjct: 439 DVSARGVDYPGVTRIVQIGIPSGPDQYVHRVGRTGR-GRDLSGRADLVLLPWEVGFVTWQ 497
Query: 746 LKDLPLDKLQLPHLNPEIQLQMDNHMAKIDNN 777
L D+PL P E++ Q+ + K D +
Sbjct: 498 LTDIPLK----PMTTNELKNQVSDLAQKYDED 525
>gi|299066188|emb|CBJ37372.1| ATP-dependent RNA helicase, deaD-box family [Ralstonia solanacearum
CMR15]
Length = 481
Score = 218 bits (556), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 133/373 (35%), Positives = 203/373 (54%), Gaps = 10/373 (2%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
FD G+ P ++AL +GY + T +Q A + + G+D + A+TGTGK+ F LP I+
Sbjct: 3 FDTFGLHPDILRALAESGYTRATPIQAAAIPVVIAGRDVMGAAQTGTGKTAGFSLPIIQN 62
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+L S+S + P+ LIL PTRELA Q+ + +A H + + GG
Sbjct: 63 LLPDASTSASPARHPVRALILTPTRELADQVY-DNVAKYAKHTALRSAVVFGGVDMNPQT 121
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
+L ++LVATPGRLLDH++ +S V L ++MLVLDEAD +LD+GF D++ I++
Sbjct: 122 EQLRRG-VEVLVATPGRLLDHVQQRS---VNLSQVRMLVLDEADRMLDMGFLPDLQRIIN 177
Query: 561 CLPRRRQSLLFSATMPKELVLKREHTYI---DTVGLG-SVETPVKIKQSCLVAPHELHFQ 616
LP RQ+LLFSAT E + K +Y+ T+ + S T ++Q P
Sbjct: 178 LLPAHRQTLLFSATFSPE-IKKLAASYLRHPQTIEVARSNATADNVRQVIYTVPDGHKQA 236
Query: 617 ILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEE 676
L HLL++ + IVF ++ + S L L K+N ++ K Q R + E
Sbjct: 237 ALVHLLRQRAEQGLPSQCIVFSNSKIGCSRLARALEREKINANAIHGDKTQTERMQTLEA 296
Query: 677 FRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLA 736
F+ +LV +DV+ARG+D + V+ +P + E Y+HR+GRTGR G G+ + L A
Sbjct: 297 FKQGTVDVLVATDVAARGLDISQMPCVINFDLPFNAEDYVHRIGRTGRAGASGDALSLFA 356
Query: 737 PWEEYFLDDLKDL 749
P +E L D++ L
Sbjct: 357 PGDERLLADIEKL 369
>gi|223590217|sp|A5DID7.2|HAS1_PICGU RecName: Full=ATP-dependent RNA helicase HAS1
gi|190346774|gb|EDK38940.2| hypothetical protein PGUG_03038 [Meyerozyma guilliermondii ATCC
6260]
Length = 569
Score = 218 bits (556), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 164/484 (33%), Positives = 260/484 (53%), Gaps = 52/484 (10%)
Query: 363 NGEKKEKREEEPILSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVK 422
N + + +E +F++ G+S T++A+ G+ +MT+VQE T+ L G+D +
Sbjct: 89 NALQPYAQADESTSGSDKFEDLGLSEPTMRAIKDMGFEKMTKVQEKTIPPLLAGRDVLGA 148
Query: 423 AKTGTGKSIAFLLPAIEAV--LKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLK 480
AKTG+GK++AFL+PAIE + LK + T V+++ PTRELA QI A L+
Sbjct: 149 AKTGSGKTLAFLIPAIEMLYSLKFKPRNGTG------VIVVSPTRELALQIFGVARDLMA 202
Query: 481 NHD-GIGVLTLVGGTRFKVDQRRLESDP----CQILVATPGRLLDHIENKSGLSVRLMGL 535
+H +G+ ++GG RR E+D +L+ATPGRLLDH++N G + L
Sbjct: 203 HHSQTLGI--VIGGA-----NRRQEADKLMKGVNLLIATPGRLLDHLQNTKGFIFK--NL 253
Query: 536 KMLVLDEADHLLDLGFRKDVENIVDCLPR-RRQSLLFSATMPKE------LVLKREHTYI 588
K LV+DEAD +L++GF +++ I+ LP RQS+LFSAT + + L+ YI
Sbjct: 254 KALVIDEADRILEIGFEDEMKQIIKVLPSDERQSMLFSATQTTKVEDLARISLRAGPLYI 313
Query: 589 DTVGLGSVETPVKIKQSCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLY 648
+ V V T ++Q + ++ F +L L+ +I K+IVF S+
Sbjct: 314 NVVPETEVSTADGLEQGYVTCDSDMRFLLLFSFLRRNI----KKKIIVFLSSCNCVKYFG 369
Query: 649 LLLREMKMNVREMYSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGI 708
LL + + V +++ ++ Q R EF +K+ IL+ +DV+ARG+D P V ++Q
Sbjct: 370 ELLNYIDLPVLDLHGKQKQQKRTNTFFEFCNAKQGILICTDVAARGLDIPAVDWIIQFDP 429
Query: 709 PPDREQYIHRLGRTGR-EGKEGEGVLLLAPWEEYFLDDLK--DLPLDKLQLP-HLNPEIQ 764
P D YIHR+GRT R G +G+ ++ L P E FL LK ++PL++ + P + IQ
Sbjct: 430 PDDPRDYIHRVGRTARGTGGKGKSLMFLTPSELGFLRYLKAANVPLNEYEFPTNKIANIQ 489
Query: 765 LQMDNHMAKIDNNVKEAA---YHAWLGYYNS-----IREIGRDKTTLVELANKFAQSIGL 816
Q+ + K + + ++A Y A+L Y S + +I DK LV K A+S G
Sbjct: 490 SQL-TKLIKGNYWLHQSAKDGYRAYLQAYASHHLKTVYQI--DKLDLV----KVAKSFGF 542
Query: 817 QRPP 820
PP
Sbjct: 543 DVPP 546
>gi|218897409|ref|YP_002445820.1| DEAD/DEAH box helicase [Bacillus cereus G9842]
gi|228901054|ref|ZP_04065263.1| ATP-dependent RNA helicase [Bacillus thuringiensis IBL 4222]
gi|228965436|ref|ZP_04126523.1| ATP-dependent RNA helicase [Bacillus thuringiensis serovar sotto
str. T04001]
gi|402560355|ref|YP_006603079.1| DEAD/DEAH box helicase [Bacillus thuringiensis HD-771]
gi|423360566|ref|ZP_17338069.1| hypothetical protein IC1_02546 [Bacillus cereus VD022]
gi|434375382|ref|YP_006610026.1| DEAD/DEAH box helicase [Bacillus thuringiensis HD-789]
gi|218541264|gb|ACK93658.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Bacillus cereus
G9842]
gi|228794267|gb|EEM41784.1| ATP-dependent RNA helicase [Bacillus thuringiensis serovar sotto
str. T04001]
gi|228858570|gb|EEN03021.1| ATP-dependent RNA helicase [Bacillus thuringiensis IBL 4222]
gi|401081562|gb|EJP89836.1| hypothetical protein IC1_02546 [Bacillus cereus VD022]
gi|401789007|gb|AFQ15046.1| DEAD/DEAH box helicase [Bacillus thuringiensis HD-771]
gi|401873939|gb|AFQ26106.1| DEAD/DEAH box helicase [Bacillus thuringiensis HD-789]
Length = 450
Score = 218 bits (556), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 137/383 (35%), Positives = 201/383 (52%), Gaps = 41/383 (10%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
K F E GIS L G + T +QE + L GKD + +AKTGTGK++AF+LP +
Sbjct: 5 KNFLELGISETFNHTLRENGITEATPIQEKAIPVILSGKDIIGQAKTGTGKTLAFVLPIL 64
Query: 439 EAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
E + +S + LI+ PTRELA QI E +L + I VL + GG
Sbjct: 65 EKINPESSD--------VQALIVAPTRELALQITTEIKKMLVQREDINVLAIYGGQDVAQ 116
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
R+L+ + I+VATPGRLLDHI ++ + L L +VLDEAD +L GF D+E+I
Sbjct: 117 QLRKLKGN-THIVVATPGRLLDHIRRET---IDLSNLSTIVLDEADQMLYFGFLYDIEDI 172
Query: 559 VDCLPRRRQSLLFSATMPKEL--------------VLKREHTYIDTVGLGSVETPVKIKQ 604
+D P +Q++LFSATMPK++ ++ E +DT+ +ET + K
Sbjct: 173 LDETPGSKQTMLFSATMPKDIKKLAKRYMDEPQMIQVQSEEVTVDTIEQRVIETTDRAK- 231
Query: 605 SCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSR 664
P L F + + ++FC T + S LY L+ + N E++
Sbjct: 232 -----PDALRFVMDRD---------QPFLAVIFCRTKVRASKLYDNLKGLGYNCAELHGD 277
Query: 665 KPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGR 724
PQ R+R+ + FR +K L+ +DV+ARG+D VT V IP D E YIHR+GRTGR
Sbjct: 278 IPQAKRERVMKSFREAKIQYLIATDVAARGLDVDGVTHVFNFDIPEDVESYIHRIGRTGR 337
Query: 725 EGKEGEGVLLLAPWEEYFLDDLK 747
G G + +A +E L++++
Sbjct: 338 AGGSGLAITFVAAKDEKHLEEIE 360
>gi|218903612|ref|YP_002451446.1| ATP-dependent RNA helicase [Bacillus cereus AH820]
gi|218537452|gb|ACK89850.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Bacillus cereus
AH820]
Length = 450
Score = 218 bits (556), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 137/373 (36%), Positives = 201/373 (53%), Gaps = 21/373 (5%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
K F E GIS L G + T +QE + L GKD + +AKTGTGK++AF+LP +
Sbjct: 5 KNFLELGISETFNHTLRENGITEATPIQEKAIPVILSGKDIIGQAKTGTGKTLAFVLPIL 64
Query: 439 EAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
E + +S + LI+ PTRELA QI E +L + I VL + GG
Sbjct: 65 EKIDPESSD--------VQALIVAPTRELALQITTEIKKMLVQREDINVLAIYGGQDVAQ 116
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
R+L+ + I+VATPGRLLDHI ++ + L L +VLDEAD +L GF D+E+I
Sbjct: 117 QLRKLKGN-THIVVATPGRLLDHIRRET---IDLSNLSTIVLDEADQMLYFGFLYDIEDI 172
Query: 559 VDCLPRRRQSLLFSATMPKELVLKREHTYID---TVGLGSVETPVK-IKQSCLVAPHELH 614
+D P +Q++LFSATMPK+ + K Y+D + + S E V I+Q +
Sbjct: 173 LDETPGSKQTMLFSATMPKD-IKKLAKRYMDEPQMIQVQSEEVTVNTIEQRVIETTDRAK 231
Query: 615 FQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRIS 674
L ++ + ++FC T + S LY L+ + N E++ PQ R+R+
Sbjct: 232 PDALRFVMDRD----QPFLAVIFCRTKVRASKLYDNLKGLGYNCAELHGDIPQAKRERVM 287
Query: 675 EEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLL 734
+ FR +K L+ +DV+ARG+D VT V IP D E YIHR+GRTGR G G +
Sbjct: 288 KSFREAKIQYLIATDVAARGLDVDGVTHVFNYDIPEDVESYIHRIGRTGRAGGSGLAITF 347
Query: 735 LAPWEEYFLDDLK 747
+A +E L++++
Sbjct: 348 VAAKDEKHLEEIE 360
>gi|21627812|emb|CAD37144.1| probable ATP-dependent RNA helicase [Aspergillus fumigatus]
Length = 750
Score = 218 bits (556), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 156/456 (34%), Positives = 243/456 (53%), Gaps = 29/456 (6%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
K F + +S T L ++ Y +T +Q +S L+G+D + AKTG+GK++AFL+P +
Sbjct: 47 KSFSDLPLSEPTASGLASSHYKTLTDIQSRAISHALKGRDILGAAKTGSGKTLAFLVPVL 106
Query: 439 EAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
E + + + L LIL PTRELA QI E + + + ++GG K
Sbjct: 107 ENLYRKQWAEHDGLG----ALILSPTRELAIQIF-EVLRKIGRYHTFSAGLVIGGKSLKE 161
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
+Q RL ILV TPGR+L H++ + L+MLVLDEAD +LDLGF++ V+ I
Sbjct: 162 EQERLGR--MNILVCTPGRMLQHLDQTALFDT--YNLQMLVLDEADRILDLGFQQTVDAI 217
Query: 559 VDCLPRRRQSLLFSATMPKEL-----VLKREHTYIDTVGLGSVETPVKIKQSCLVAPHEL 613
+ LP+ RQ+LLFSAT K++ + ++ Y+ S TP K++Q ++ P
Sbjct: 218 IGHLPKERQTLLFSATQTKKVSDLARLSLQDPEYVAVHETASSATPSKLQQHYVITPLPQ 277
Query: 614 HFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK--MNVREMYSRKPQLYRD 671
IL ++ ++ K +VF S+G +Y R ++ + + ++ R+ Q R
Sbjct: 278 KLDILWSFIRSNLKS----KTMVFLSSGKQVRFVYESFRHLQPGIPLMHLHGRQKQGGRL 333
Query: 672 RISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEG 731
I F SK +L ++DV+ARG+D+P V V+Q+ P D + YIHR+GRT R +EG
Sbjct: 334 DIVTRFSQSKHCVLFSTDVAARGLDFPAVDWVIQLDCPEDADTYIHRVGRTARYEREGRA 393
Query: 732 VLLLAPWEEY-FLDDL--KDLPLDKLQL-PHLNPEIQLQMDNHMAKIDNNVKEAAYHAWL 787
VL L P EE L L K +P++K+ + + I+ Q+ N M D +K A++
Sbjct: 394 VLFLDPSEEEGMLKRLEQKKVPIEKINIKANKQQSIKDQLQN-MCFKDPELKYLGQKAFI 452
Query: 788 GYYNSIREIGRDKTT--LVELA-NKFAQSIGLQRPP 820
Y S+ I +DK L EL ++FA S+GL P
Sbjct: 453 SYVKSVY-IQKDKEIFKLKELKLDEFAASLGLPGAP 487
>gi|386332888|ref|YP_006029057.1| atp-dependent rna helicase protein [Ralstonia solanacearum Po82]
gi|334195335|gb|AEG68520.1| atp-dependent rna helicase protein [Ralstonia solanacearum Po82]
Length = 495
Score = 218 bits (556), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 133/373 (35%), Positives = 205/373 (54%), Gaps = 10/373 (2%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
FD G+ P ++ALT +GY + T +Q A + + G+D + A+TGTGK+ F LP I+
Sbjct: 17 FDTFGLHPDILRALTESGYTRPTPIQAAAIPVVVGGRDVMGAAQTGTGKTAGFSLPIIQN 76
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+L ++S + P+ LIL PTRELA Q+ + +A + + + GG
Sbjct: 77 LLPEANTSASPARHPVRALILTPTRELADQVY-DNVAKYAKYTALRSAVVFGGVDMNPQT 135
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
+L +ILVATPGRLLDH++ +S V L ++MLVLDEAD +LD+GF D++ I++
Sbjct: 136 EQLRRG-VEILVATPGRLLDHVQQRS---VNLSQVRMLVLDEADRMLDMGFLPDLQRIIN 191
Query: 561 CLPRRRQSLLFSATMPKELVLKREHTYI---DTVGLG-SVETPVKIKQSCLVAPHELHFQ 616
LP RQ+LLFSAT E + K +Y+ T+ + S T ++Q P
Sbjct: 192 LLPAHRQTLLFSATFSPE-IKKLAASYLRHPQTIEVARSNATADNVRQVIYTVPDGHKQA 250
Query: 617 ILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEE 676
L HLL++ + IVF ++ + S L L K+N ++ K Q+ R + E
Sbjct: 251 ALVHLLRQRAEQGLPSQCIVFSNSKIGCSRLARALEREKINANAIHGDKTQIERMQTLEA 310
Query: 677 FRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLA 736
F+ +LV +DV+ARG+D + V+ +P + E Y+HR+GRTGR G G+ + L A
Sbjct: 311 FKQGTVDVLVATDVAARGLDISQMPCVINFDLPFNAEDYVHRIGRTGRAGASGDALSLFA 370
Query: 737 PWEEYFLDDLKDL 749
P +E L D++ L
Sbjct: 371 PGDERLLADIEKL 383
>gi|50307015|ref|XP_453485.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|74606431|sp|Q6CRF4.1|DBP4_KLULA RecName: Full=ATP-dependent RNA helicase DBP4
gi|49642619|emb|CAH00581.1| KLLA0D09504p [Kluyveromyces lactis]
Length = 770
Score = 218 bits (556), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 149/463 (32%), Positives = 242/463 (52%), Gaps = 39/463 (8%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F + IS T+K L A +I++T +Q ++ L+G D + AKTG+GK++AFL+P IE
Sbjct: 43 FQDLPISEQTLKGLKEAAFIKLTEIQRESIPLSLKGHDVLGAAKTGSGKTLAFLIPVIEK 102
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+ + + L LI+ PTRELA QI E ++ + H ++GG ++
Sbjct: 103 LYREKWTDMDGL----GALIISPTRELAMQIY-EVLSKIGKHTTFSAGLVIGGKDVTFEK 157
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
R+ IL+ TPGR+L H++ G + L++LVLDEAD LD+GF++ ++ I++
Sbjct: 158 ERISR--INILIGTPGRILQHMDQAVGFNTS--NLQLLVLDEADRCLDMGFKRTLDAIIN 213
Query: 561 CLPRRRQSLLFSATMPKELVLKREHTYIDTVGLGSVE---------TPVKIKQSCLVAPH 611
LP RQ+LLFSAT + L + D +G++E TP ++QS + P
Sbjct: 214 NLPASRQTLLFSATQSQSLDDLARLSLTDYKQVGTMEVLNANSSSATPESLQQSYIEVPL 273
Query: 612 ELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK--MNVREMYSRKPQLY 669
IL +K H+ K+IVF S+ +Y R+++ +++ ++ R+ Q
Sbjct: 274 PDKLDILFSFIKSHLKS----KLIVFLSSSKQVHFVYETFRKLQPGISLMHLHGRQKQTA 329
Query: 670 RDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEG 729
R ++F ++ + L ++DV ARG+D+P V V+QV P D + YIHR+GR R GKEG
Sbjct: 330 RTETLDKFSRAQHVCLFSTDVVARGIDFPSVDWVIQVDCPEDVDTYIHRVGRAARFGKEG 389
Query: 730 EGVLLLAPWEEYFLDDLKDLPLDKLQLPHLNPEIQL------QMDNHMAKIDNNVKEAAY 783
+ +++L P EE LK L ++ LN + Q+ + + K D +K
Sbjct: 390 KSLIMLTPEEEEGF--LKRLKTKNIEPSRLNIKQSKKKSIKPQLQSLLFK-DPELKYLGQ 446
Query: 784 HAWLGYYNSIREIGRDKTTL----VELANKFAQSIGLQRPPPL 822
A++ Y SI I +DK + L +FA S+GL P +
Sbjct: 447 KAFISYVRSIY-IQKDKEVFHFDKIPL-EQFANSLGLPGAPKI 487
>gi|158293341|ref|XP_314700.4| AGAP008601-PA [Anopheles gambiae str. PEST]
gi|157016658|gb|EAA10183.4| AGAP008601-PA [Anopheles gambiae str. PEST]
Length = 611
Score = 218 bits (556), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 160/489 (32%), Positives = 252/489 (51%), Gaps = 46/489 (9%)
Query: 361 NGNGEKKEKREEEP-----------ILSQKRFD--ECGISPLTIKALTAAGYIQMTRVQE 407
+ NGE KE +EE IL + F E +S T+KA+ G+ +MT +Q
Sbjct: 87 DSNGEGKEAEQEETVPSMTNSAYEIILGNREFKSLEGKVSDHTMKAIGEMGFTKMTEIQA 146
Query: 408 ATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLVPPIYVLILCPTREL 467
++ LEG+D + AKTG+GK++AFL+PA+E + K V+++ PTREL
Sbjct: 147 KSIPPLLEGRDLIGSAKTGSGKTLAFLIPAVELIHKLRFKPRNG----AGVIVISPTREL 202
Query: 468 ASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSG 527
A QI L+ H L L+GG + +LE I+VATPGRLLDH+ KS
Sbjct: 203 AMQIFGVLKELMTYHCQTYGL-LMGGASRHTENEKLEKG-INIIVATPGRLLDHL--KST 258
Query: 528 LSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQSLLFSATMPK------ELVL 581
+ L+ L++DE D +L++GF +D++ I+ LP++RQ++LFSAT +L L
Sbjct: 259 PNFLFKNLQCLIIDECDRILEIGFEEDLKQIISILPKKRQTMLFSATQSSRLEELGKLAL 318
Query: 582 KREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTG 641
K E Y+ T ++Q +V P E +L LK++ KV+VF S+
Sbjct: 319 KSEPIYVGVDDNKKEATVTGLEQGYIVCPSERRLLVLFTFLKKN----RKKKVMVFFSSC 374
Query: 642 MVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVT 701
+ + L + + V ++ ++ Q R + +F ++ IL+ +DV+ARG+D P V
Sbjct: 375 LSVKFHHELFNYIDLPVMSIHGKQKQSKRTSVFFQFCNAETGILLCTDVAARGLDIPAVD 434
Query: 702 SVVQVGIPPDREQYIHRLGRTGR-EGKEGEGVLLLAPWEEYFLDDLKD--LPLDKLQLPH 758
+VQ P D ++YIHR+GRT R E G +L+L P E FL LK +PL++ +
Sbjct: 435 WIVQYDPPNDTKEYIHRVGRTARGEDLCGHALLMLRPEEVGFLKYLKQAKVPLNEFEFSW 494
Query: 759 LN-PEIQLQMDNHMAK--IDNNVKEAAYHAWLGYYNSIREIGRDKTTLVELAN----KFA 811
+IQLQ++N MAK N + A+ ++ Y G + +AN + A
Sbjct: 495 SKIADIQLQLENLMAKNYFLNQSGKLAFKTYVRAYE-----GHHMKDVFNIANLDLVQVA 549
Query: 812 QSIGLQRPP 820
++ G +PP
Sbjct: 550 KNFGFTQPP 558
>gi|300703503|ref|YP_003745105.1| ATP-dependent RNA helicase, dead-box family [Ralstonia solanacearum
CFBP2957]
gi|299071166|emb|CBJ42480.1| ATP-dependent RNA helicase, deaD-box family [Ralstonia solanacearum
CFBP2957]
Length = 495
Score = 218 bits (556), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 133/373 (35%), Positives = 205/373 (54%), Gaps = 10/373 (2%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
FD G+ P ++ALT +GY + T +Q A + + G+D + A+TGTGK+ F LP I+
Sbjct: 17 FDTFGLHPDILRALTESGYTRPTPIQAAAIPVVVGGRDVMGAAQTGTGKTAGFSLPIIQN 76
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+L ++S + P+ LIL PTRELA Q+ + +A + + + GG
Sbjct: 77 LLPEANTSASPARHPVRALILTPTRELADQVY-DNVAKYAKYTALRSAVVFGGVDMNPQT 135
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
+L +ILVATPGRLLDH++ +S V L ++MLVLDEAD +LD+GF D++ I++
Sbjct: 136 EQLRRG-VEILVATPGRLLDHVQQRS---VNLSQVRMLVLDEADRMLDMGFLPDLQRIIN 191
Query: 561 CLPRRRQSLLFSATMPKELVLKREHTYI---DTVGLG-SVETPVKIKQSCLVAPHELHFQ 616
LP RQ+LLFSAT E + K +Y+ T+ + S T ++Q P
Sbjct: 192 LLPAHRQTLLFSATFSPE-IKKLAASYLRHPQTIEVARSNATADNVRQVIYTVPDGHKQA 250
Query: 617 ILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEE 676
L HLL++ + IVF ++ + S L L K+N ++ K Q+ R + E
Sbjct: 251 ALVHLLRQRAEQGLPSQCIVFSNSKIGCSRLARALEREKINANAIHGDKTQIERMQTLEA 310
Query: 677 FRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLA 736
F+ +LV +DV+ARG+D + V+ +P + E Y+HR+GRTGR G G+ + L A
Sbjct: 311 FKQGTVDVLVATDVAARGLDISQMPCVINFDLPFNAEDYVHRIGRTGRAGASGDALSLFA 370
Query: 737 PWEEYFLDDLKDL 749
P +E L D++ L
Sbjct: 371 PGDERLLADIEKL 383
>gi|207743814|ref|YP_002260206.1| atp-dependent rna helicase protein [Ralstonia solanacearum IPO1609]
gi|421897757|ref|ZP_16328124.1| atp-dependent rna helicase protein [Ralstonia solanacearum MolK2]
gi|206588963|emb|CAQ35925.1| atp-dependent rna helicase protein [Ralstonia solanacearum MolK2]
gi|206595214|emb|CAQ62141.1| atp-dependent rna helicase protein [Ralstonia solanacearum IPO1609]
Length = 495
Score = 218 bits (556), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 133/373 (35%), Positives = 205/373 (54%), Gaps = 10/373 (2%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
FD G+ P ++ALT +GY + T +Q A + + G+D + A+TGTGK+ F LP I+
Sbjct: 17 FDTFGLHPDILRALTESGYTRPTPIQAAAIPVVVGGRDVMGAAQTGTGKTAGFSLPIIQN 76
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+L ++S + P+ LIL PTRELA Q+ + +A + + + GG
Sbjct: 77 LLPEANTSASPARHPVRALILTPTRELADQVY-DNVAKYAKYTALRSAVVFGGVDMNPQT 135
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
+L +ILVATPGRLLDH++ +S V L ++MLVLDEAD +LD+GF D++ I++
Sbjct: 136 EQLRRG-VEILVATPGRLLDHVQQRS---VNLSQVRMLVLDEADRMLDMGFLPDLQRIIN 191
Query: 561 CLPRRRQSLLFSATMPKELVLKREHTYI---DTVGLG-SVETPVKIKQSCLVAPHELHFQ 616
LP RQ+LLFSAT E + K +Y+ T+ + S T ++Q P
Sbjct: 192 LLPAHRQTLLFSATFSPE-IKKLAASYLRHPQTIEVARSNATADNVRQVIYTVPDGHKQA 250
Query: 617 ILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEE 676
L HLL++ + IVF ++ + S L L K+N ++ K Q+ R + E
Sbjct: 251 ALVHLLRQRAEQGLPSQCIVFSNSKIGCSRLARALEREKINANAIHGDKTQIERMQTLEA 310
Query: 677 FRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLA 736
F+ +LV +DV+ARG+D + V+ +P + E Y+HR+GRTGR G G+ + L A
Sbjct: 311 FKQGTVDVLVATDVAARGLDISQMPCVINFDLPFNAEDYVHRIGRTGRAGASGDALSLFA 370
Query: 737 PWEEYFLDDLKDL 749
P +E L D++ L
Sbjct: 371 PGDERLLADIEKL 383
>gi|67516615|ref|XP_658193.1| hypothetical protein AN0589.2 [Aspergillus nidulans FGSC A4]
gi|74627495|sp|Q5BFU1.1|DBP4_EMENI RecName: Full=ATP-dependent RNA helicase dbp4
gi|40747532|gb|EAA66688.1| hypothetical protein AN0589.2 [Aspergillus nidulans FGSC A4]
gi|259489143|tpe|CBF89171.1| TPA: ATP-dependent RNA helicase dbp4 (EC 3.6.1.-)
[Source:UniProtKB/Swiss-Prot;Acc:Q5BFU1] [Aspergillus
nidulans FGSC A4]
Length = 812
Score = 218 bits (556), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 153/456 (33%), Positives = 241/456 (52%), Gaps = 33/456 (7%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F + IS T+ LT++ + +T +Q +S L+G+D + AKTG+GK++AFL+P +E
Sbjct: 50 FSDLPISEPTLSGLTSSHFKTLTDIQSRAISHALKGRDVLGAAKTGSGKTLAFLVPILEN 109
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+ + S L LI+ PTRELA QI E + + + ++GG K +Q
Sbjct: 110 LYRKQWSDHDGLG----ALIISPTRELAIQIF-EVLRKIGRYHTFSAGLVIGGKSLKEEQ 164
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
RL ILV TPGR+L H++ + L+MLVLDEAD ++D+GF+K V+ I+
Sbjct: 165 ERLGR--MNILVCTPGRMLQHLDQTAFFET--YNLQMLVLDEADRIMDMGFQKTVDAIIG 220
Query: 561 CLPRRRQSLLFSATMPKEL-----VLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHF 615
LP RQ+LLFSAT K++ + ++ Y+ S TP K++Q +V P
Sbjct: 221 HLPPERQTLLFSATQTKKVSDLARLSLQDPEYVAVHEAASSATPSKLQQHYVVTPLPQKL 280
Query: 616 QILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK--MNVREMYSRKPQLYRDRI 673
L ++ ++ K IVF S+G +Y R M+ + + ++ R+ Q R I
Sbjct: 281 DTLWSFIRSNLKS----KTIVFMSSGKQVRFVYESFRHMQPGIPLLHLHGRQKQGGRLDI 336
Query: 674 SEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVL 733
+ F ++ +L ++DV+ARG+D+P V V+Q+ P D + YIHR+GRT R ++G VL
Sbjct: 337 TTRFSQAQHAVLFSTDVAARGLDFPAVDWVIQLDCPEDADTYIHRVGRTARYERDGRAVL 396
Query: 734 LLAPWEEYFLDDLKDLPLDKLQLPHLN------PEIQLQMDNHMAKIDNNVKEAAYHAWL 787
L P EE + L+ L ++ + +N I+ Q+ N M D +K A++
Sbjct: 397 FLDPSEEKGM--LRRLEQKRVTVERINVRANKQQSIKNQLQN-MCFKDPELKYLGQKAFI 453
Query: 788 GYYNSIREIGRDKTT--LVELA-NKFAQSIGLQRPP 820
Y S+ I +DK T L EL + FA S+GL P
Sbjct: 454 SYVKSVY-IQKDKETFNLKELKLDDFAASLGLPGAP 488
>gi|51593782|gb|AAH80729.1| Ddx10 protein [Mus musculus]
Length = 744
Score = 218 bits (556), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 150/452 (33%), Positives = 246/452 (54%), Gaps = 43/452 (9%)
Query: 390 TIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSST 449
T+K L A Y +T +Q+ T+ L+GKD + AKTG+GK++AFL+P +EA+ + +ST
Sbjct: 15 TLKGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLEALYRLQWTST 74
Query: 450 TQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQ 509
L VLI+ PTRELA Q + KNHD L ++GG K + R+ +
Sbjct: 75 DGL----GVLIISPTRELAYQTFEVLRKVGKNHDFSAGL-IIGGKDLKHEAERINN--IN 127
Query: 510 ILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQSL 569
ILV TPGRLL H++ + L+MLVLDEAD +LD+GF + I++ LP++RQ+L
Sbjct: 128 ILVCTPGRLLQHMDE--TICFHATNLQMLVLDEADRILDMGFADTMNAIIENLPKKRQTL 185
Query: 570 LFSATMPKEL-----VLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILHHLLKE 624
LFSAT K + + ++ Y+ TP ++Q+ ++ +L L+
Sbjct: 186 LFSATQTKSVKDLARLSLKDPEYVWVHEKAKYSTPATLEQNYIICELHQKISVLFSFLRS 245
Query: 625 HILGTPDYKVIVFCSTGMVTSLLYLLLREMK--MNVREMYSRKPQLYRDRISEEFRASKR 682
H+ K IVF S+ LY + ++ +++ ++ R+ Q+ R + EF +
Sbjct: 246 HL----KKKSIVFFSSCKEVQYLYRVFCRLRPGISILALHGRQQQMRRMEVYNEFVRKRA 301
Query: 683 LILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLAPWEEY- 741
+L +D++ARG+D+P V V+Q P D YIHR GRT R ++GE +L+L P EE
Sbjct: 302 AVLFATDIAARGLDFPAVNWVLQFDCPEDANTYIHRAGRTARYKEDGEALLILLPSEEQG 361
Query: 742 FLDDL--KDLPLDKLQLPHLNPE----IQLQMDNHMAKIDNNVKEAAYHAWLGYYNSIRE 795
+ L K +P+ +++ +NPE +Q ++++ +A+ D ++KE A ++ Y S+
Sbjct: 362 MVQQLLQKKVPVKEIK---INPEKLIDVQKKLESFLAQ-DQDLKERAQRCFVSYIRSVY- 416
Query: 796 IGRDKTTLVELAN-------KFAQSIGLQRPP 820
+ +DK E+ N ++A S+GL P
Sbjct: 417 LMKDK----EVFNVSKLPITEYALSLGLAVAP 444
>gi|361131335|gb|EHL03033.1| putative ATP-dependent RNA helicase, mitochondrial [Glarea
lozoyensis 74030]
Length = 580
Score = 218 bits (556), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 156/448 (34%), Positives = 228/448 (50%), Gaps = 61/448 (13%)
Query: 402 MTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSS------STTQLVPP 455
MT VQ T++ L+G D + +A+TGTGK+I FL+P ++ +++ +
Sbjct: 1 MTDVQSMTINQALQGTDIIAQARTGTGKTIGFLVPMLQNIIRRNPELAERKRYSNARASD 60
Query: 456 IYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILVATP 515
I +I+ PTRELA QIA EA L D I V VGG ++ + + C ILVATP
Sbjct: 61 IRAIIISPTRELAEQIATEAAKLCSATDLI-VQIAVGGNSKRMMLSKTRREGCHILVATP 119
Query: 516 GRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPR----RRQSLLF 571
GRL D + + +R L LVLDEAD LLD GF KD++ I LP RQ+LLF
Sbjct: 120 GRLYDLLSDPYS-GIRADQLTTLVLDEADRLLDDGFSKDIDEIKTLLPDITKVDRQTLLF 178
Query: 572 SATMPKELV------LKREHTYIDTVGLGSVETPVKIKQSCL-VAPHELHFQILHHLLKE 624
SAT+P+E++ LK + ++ TV G + T K+ Q+ + VA +E ++ L K
Sbjct: 179 SATVPREVMGLVKRTLKPDFHFVQTVKEGDLATHQKVPQNVVTVAGYENLMPAVYELCKR 238
Query: 625 HI------LGTPDYKVIVFCSTGMVTSLLYLLLREMK--------------MNVREMYSR 664
+ G P +I F +T V L Y + + +++ +
Sbjct: 239 QVDLAAKGEGLPFKAIIYFQATASV-QLAYRTFDNLADQSGGRFAKSPLYPAEISQIHGQ 297
Query: 665 KPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGR 724
Q R ++E FR +K IL ++DV+ARGMD+P+VT V+QVG+P +REQYIHR+GRTGR
Sbjct: 298 LTQERRTNVTERFRRAKTGILFSTDVTARGMDFPNVTHVIQVGLPSNREQYIHRVGRTGR 357
Query: 725 EGKEGEGVLLLAPWEEYFLDD----LKDLPLDK--------------LQLPHLNPEIQLQ 766
K G + + E +D+ L+ LP+ K QLP EI Q
Sbjct: 358 GDKTGSAYIFVHEAE---MDNAARTLRQLPIKKDDTLETAMVDMTKDAQLPASVAEIITQ 414
Query: 767 MDNHMAKIDNNVKEAAYHAWLGYYNSIR 794
+ ID + K+AA+ LG +R
Sbjct: 415 VGLATKMIDRDTKQAAFMGTLGTMKGVR 442
>gi|449550754|gb|EMD41718.1| hypothetical protein CERSUDRAFT_79353 [Ceriporiopsis subvermispora
B]
Length = 561
Score = 218 bits (556), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 153/464 (32%), Positives = 246/464 (53%), Gaps = 31/464 (6%)
Query: 372 EEPILSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSI 431
+E + +K F E +S T++AL G+ MT +QE ++ A L G+D + A+TG+GK++
Sbjct: 14 QESVPGRKSFSELELSEPTMRALQEMGFTTMTPIQEKSIPALLTGRDVLGAARTGSGKTL 73
Query: 432 AFLLPAIEAV--LKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHD-GIGVL 488
AFL+PAIE + +K + T ++ I+ PTRELA QI A L+ +H G++
Sbjct: 74 AFLIPAIELLHRMKFKPRNGTGII------IVSPTRELALQIFGVAKELMAHHSQTFGIV 127
Query: 489 TLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLD 548
+GG + + +L+ ++VATPGRLLDH+++ G R LK LV+DEAD +L+
Sbjct: 128 --MGGANRRAEAEKLQKG-VNLIVATPGRLLDHLQDTKGFVFR--NLKALVIDEADRILE 182
Query: 549 LGFRKDVENIVDCLP-RRRQSLLFSATMPKELV------LKREHTYIDTVGLGSVETPVK 601
+GF ++++ I++ LP RQS+LFSAT ++ L+ YID + T
Sbjct: 183 VGFEEEMKRIINILPTENRQSMLFSATQTTKVTDLARISLRPGPLYIDVDKTENTSTVAT 242
Query: 602 IKQSCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREM 661
+ Q +V P + F +L LK+H+ K++VF S+ LL + + V ++
Sbjct: 243 LSQGYVVCPSDRRFLLLFTFLKKHM----KKKIVVFFSSCNSVKYHAELLNYIDVPVLDL 298
Query: 662 YSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGR 721
+ ++ Q R EF ++ L+ +DV+ARG+D P V ++Q P D YIHR+GR
Sbjct: 299 HGKQKQQKRTTTFFEFCNAESGTLLCTDVAARGLDIPRVDWIIQYDPPDDPRDYIHRVGR 358
Query: 722 TGREGKEGEGVLLLAPWEEYFLDDLKD--LPLDKLQLP-HLNPEIQLQMDNHMAK--IDN 776
T R GK G+ ++ L P E FL LKD +PL++ P +Q Q++ + K +
Sbjct: 359 TARAGKVGKSLMFLLPSELGFLRFLKDAKVPLNEFSFPVDKIANVQSQLEKLLQKNYFLH 418
Query: 777 NVKEAAYHAWLGYYNSIREIGRDKTTLVELANKFAQSIGLQRPP 820
Y ++L Y S ++LA K +S G PP
Sbjct: 419 QSARDGYRSYLQAYASYSLKKIFDVNQLDLA-KVGKSFGFAVPP 461
>gi|85373802|ref|YP_457864.1| DNA and RNA helicase [Erythrobacter litoralis HTCC2594]
gi|84786885|gb|ABC63067.1| DNA and RNA helicase [Erythrobacter litoralis HTCC2594]
Length = 492
Score = 218 bits (556), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 141/387 (36%), Positives = 214/387 (55%), Gaps = 21/387 (5%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
FD+ G+S ++AL GY + T +Q + LEG+D + A+TGTGK+ AF+LP+I+
Sbjct: 6 FDQLGLSQPVLQALDMKGYNEPTPIQAQAIPPVLEGRDLLGIAQTGTGKTAAFMLPSIDR 65
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHD---GIGVLTLVGGTRFK 497
+ +A + + + +L+L PTRELA QIA A K++ G+ V ++VGGT
Sbjct: 66 LREADNQTPFK---SCRMLVLAPTRELAGQIAQSA----KDYGAMAGLKVHSIVGGTSVG 118
Query: 498 VDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVEN 557
D+ +L ILVATPGRLLD I+ K+ +L +++LVLDEAD +LDLGF +
Sbjct: 119 KDRNKLHRG-TDILVATPGRLLDLIDQKA---FKLNAVEILVLDEADQMLDLGFIHALRQ 174
Query: 558 IVDCLPRRRQSLLFSATMPK---ELVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELH 614
I D +P RQ+L FSATMPK ELV K + + T +I Q + +
Sbjct: 175 INDLVPAERQTLFFSATMPKQIQELVGKYCRNPVKVSVTPAATTAERIDQYLFMVQQDEK 234
Query: 615 FQILHHLLK-EHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRI 673
++ +LK H + +++VF T + LR+ + ++ K Q R R
Sbjct: 235 QALIEMILKGRHAVPGKQERILVFTRTKHGADRVVKKLRQAGIESNAIHGNKSQPQRQRA 294
Query: 674 SEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVL 733
+EF+ +K IL+ +DV+ARG+D P V+ V+ +P EQY+HR+GRT R GK+G +
Sbjct: 295 LDEFKRAKTPILIATDVAARGIDIPGVSHVINYELPNVPEQYVHRIGRTARAGKDGVAIA 354
Query: 734 LLAPWEEYFLDDLK---DLPLDKLQLP 757
A E +L D++ D D+L LP
Sbjct: 355 FCAEDERAYLKDIQKNTDAEFDRLPLP 381
>gi|380011151|ref|XP_003689675.1| PREDICTED: probable ATP-dependent RNA helicase pitchoune-like [Apis
florea]
Length = 607
Score = 218 bits (556), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 156/450 (34%), Positives = 252/450 (56%), Gaps = 35/450 (7%)
Query: 390 TIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSST 449
T+KA+ G+ MT +Q + LEG+D V AKTG+GK++AFL+PAIE + K
Sbjct: 119 TLKAIKDMGFTNMTEIQAKAIPPLLEGRDLVGAAKTGSGKTLAFLIPAIELIYKL----- 173
Query: 450 TQLVP--PIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDP 507
+ +P +I+ PTREL+ Q L+K H L L+GG + + ++L S
Sbjct: 174 -KFMPRNGTGCIIISPTRELSMQTFGVLKELMKYHHHTYGL-LMGGANRQTEAQKL-SKG 230
Query: 508 CQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQ 567
I+VATPGRLLDH++N + L+ LV+DEAD +LD+GF ++++ I++ LP++RQ
Sbjct: 231 INIVVATPGRLLDHLQNTPDFLYK--NLQCLVIDEADRILDIGFEEELKQIINILPKKRQ 288
Query: 568 SLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILHHL 621
++LFSAT K+ L LK+E Y+ T ++Q + P E F +L
Sbjct: 289 TMLFSATQTKKTEMLMTLALKKEPVYVGVDDDKEKATVEGLEQGYVACPSEKRFLLLFTF 348
Query: 622 LKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEFRASK 681
LK++ K++VF S+ M + LL + + V ++ ++ Q R +F +
Sbjct: 349 LKKN----RKKKIMVFFSSCMSVKYHHELLNYIDLPVLSIHGKQKQTKRTTTFFQFCNAS 404
Query: 682 RLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGR-EGKEGEGVLLLAPWEE 740
IL+ +DV+ARG+D P V +VQ P D ++YIHR+GRT R EG G +L+L P E
Sbjct: 405 SGILLCTDVAARGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHALLILRPEEL 464
Query: 741 YFLDDLKD--LPLDKLQLP-HLNPEIQLQMDNHMAK---IDNNVKEAAYHAWLGYYNS-- 792
FL LK +P+++ + +IQLQ++ ++K ++ + KE A+ A++ Y+S
Sbjct: 465 GFLRYLKQAKVPVNEFDFSWNKIADIQLQLEKLVSKNYFLNMSAKE-AFKAYVRAYDSHH 523
Query: 793 IREIGRDKTTLVELANKFAQSIGLQRPPPL 822
+++I +T ++LA K A+S G PP +
Sbjct: 524 LKQIFNIET--LDLA-KVAKSFGFVVPPAV 550
>gi|307189121|gb|EFN73577.1| Probable ATP-dependent RNA helicase DDX10 [Camponotus floridanus]
Length = 791
Score = 218 bits (556), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 147/460 (31%), Positives = 241/460 (52%), Gaps = 40/460 (8%)
Query: 380 RFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIE 439
+F + +S +T+K L YI MT +Q ++ L+G D + AKTG+GK++AFL+P +E
Sbjct: 39 KFSDLPLSRITLKGLVENNYIDMTDIQRQSIGLALQGNDILGAAKTGSGKTLAFLIPVLE 98
Query: 440 AVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVD 499
+ T+L + LI+ PTRELA QI + + HD + ++GG K +
Sbjct: 99 ILY---CKQWTRL-DGVGALIITPTRELAYQIYETLRKVGRYHD-VSAGLIIGGKDLKFE 153
Query: 500 QRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIV 559
++R+ D C +++ TPGRLL H++ + +++LVLDEAD LD+GF K + I+
Sbjct: 154 RKRM--DQCNVVICTPGRLLQHMDENPLFDC--VNMQILVLDEADRCLDMGFEKTMNCII 209
Query: 560 DCLPRRRQSLLFSATMPKEL-----VLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELH 614
LP +RQ+LLFSAT K + + ++ Y+ + TP ++Q+ +V E
Sbjct: 210 ANLPPKRQTLLFSATQTKSVKDLARLSLKDPLYVSVHEYSTHTTPENLQQNYIVCSLEDK 269
Query: 615 FQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK--MNVREMYSRKPQLYRDR 672
+L ++ H+ K+IVF S+ +Y + ++ +++ +Y Q+ R
Sbjct: 270 MAMLWSFIRNHL----KQKIIVFFSSCKQVKYIYEVFCRLRPGVSLLALYGTLHQMKRMS 325
Query: 673 ISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGV 732
I E F + +L +D++ARG+D+P V V+Q+ P D YIHR GRT R GE +
Sbjct: 326 IYESFCKKQYAVLFATDIAARGLDFPAVNWVLQMDCPEDVNAYIHRAGRTARFQSGGESL 385
Query: 733 LLLAPWEEYFLDDLKD--LPLD-------KLQLPHLNPEIQLQMDNHMAKIDNNVKEAAY 783
L+L P EE ++ LK +P++ KLQ PH E L + + KE A
Sbjct: 386 LVLLPSEEGIIEKLKQCKIPINMIRINPSKLQSPHRKLEALLAQNIAL-------KETAQ 438
Query: 784 HAWLGYYNSIREIGRDKTTLVELA---NKFAQSIGLQRPP 820
A++ Y S+ + +DK A + +A+S+GL PP
Sbjct: 439 RAFIAYIKSVF-LMKDKEIFNVHALDTDAYAKSLGLAIPP 477
>gi|206974096|ref|ZP_03235014.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Bacillus cereus
H3081.97]
gi|217959967|ref|YP_002338523.1| DEAD/DEAH box family ATP-dependent RNA helicase [Bacillus cereus
AH187]
gi|229139159|ref|ZP_04267734.1| ATP-dependent RNA helicase [Bacillus cereus BDRD-ST26]
gi|375284481|ref|YP_005104920.1| ATP-dependent RNA helicase [Bacillus cereus NC7401]
gi|423352280|ref|ZP_17329907.1| hypothetical protein IAU_00356 [Bacillus cereus IS075]
gi|206748252|gb|EDZ59641.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Bacillus cereus
H3081.97]
gi|217065592|gb|ACJ79842.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Bacillus cereus
AH187]
gi|228644218|gb|EEL00475.1| ATP-dependent RNA helicase [Bacillus cereus BDRD-ST26]
gi|358353008|dbj|BAL18180.1| ATP-dependent RNA helicase [Bacillus cereus NC7401]
gi|401091974|gb|EJQ00110.1| hypothetical protein IAU_00356 [Bacillus cereus IS075]
Length = 454
Score = 218 bits (556), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 138/377 (36%), Positives = 203/377 (53%), Gaps = 21/377 (5%)
Query: 375 ILSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFL 434
+++ K F E GIS L G + T +QE + L GKD + +AKTGTGK++AF+
Sbjct: 1 MVNVKNFLELGISETFNHTLRENGITEATPIQEQAIPVILSGKDIIGQAKTGTGKTLAFV 60
Query: 435 LPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGT 494
LP +E + S + LI+ PTRELA QI E +L + I VL + GG
Sbjct: 61 LPILEKIDPECSD--------VQALIVAPTRELALQITTEIKKMLVQREDINVLAIYGGQ 112
Query: 495 RFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKD 554
R+L+ + I+VATPGRLLDHI ++ + L L +VLDEAD +L GF D
Sbjct: 113 DVAQQLRKLKGN-THIVVATPGRLLDHIRRET---IDLSNLTTIVLDEADQMLYFGFLYD 168
Query: 555 VENIVDCLPRRRQSLLFSATMPKELVLKREHTYID---TVGLGSVETPVK-IKQSCLVAP 610
+E+I+D P +Q++LFSATMPK+ + K Y+D V + S E V I+Q +
Sbjct: 169 IEDILDETPGSKQTMLFSATMPKD-IKKLAKRYMDEPQMVQVQSEEVTVNTIEQRVIETT 227
Query: 611 HELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYR 670
L ++ + ++FC T + S LY L+ + N E++ PQ R
Sbjct: 228 DRAKPDALRFVMDRD----QPFLAVIFCRTKVRASKLYDNLKGLGYNCAELHGDIPQAKR 283
Query: 671 DRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGE 730
+R+ + FR +K L+ +DV+ARG+D VT V IP D E YIHR+GRTGR G G
Sbjct: 284 ERVMKSFREAKIQYLIATDVAARGLDVDGVTHVFNYDIPEDVESYIHRIGRTGRAGGSGL 343
Query: 731 GVLLLAPWEEYFLDDLK 747
+ +A +E L++++
Sbjct: 344 AITFVAAKDEKHLEEIE 360
>gi|423365773|ref|ZP_17343206.1| hypothetical protein IC3_00875 [Bacillus cereus VD142]
gi|401089504|gb|EJP97670.1| hypothetical protein IC3_00875 [Bacillus cereus VD142]
Length = 446
Score = 218 bits (555), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 136/383 (35%), Positives = 201/383 (52%), Gaps = 41/383 (10%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
K F E GIS L G + T +QE + + GKD + +AKTGTGK++AF+LP +
Sbjct: 5 KNFLELGISETFNHTLRENGITEATPIQEKAIPVIMSGKDVIGQAKTGTGKTLAFVLPIL 64
Query: 439 EAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
E + +S + LI+ PTRELA QI E +L + I VL + GG
Sbjct: 65 EKIDPESSD--------VQALIVAPTRELALQITTEIKKMLVQREDINVLAIYGGQDVAQ 116
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
R+L+ + I+VATPGRLLDHI ++ + L L +VLDEAD +L GF D+E+I
Sbjct: 117 QLRKLKGN-THIVVATPGRLLDHIRRET---IDLSNLSTIVLDEADQMLYFGFLYDIEDI 172
Query: 559 VDCLPRRRQSLLFSATMPKEL--------------VLKREHTYIDTVGLGSVETPVKIKQ 604
+D P +Q++LFSATMPK++ ++ E +DT+ +ET + K
Sbjct: 173 LDETPDSKQTMLFSATMPKDIKKLAKRYMEEPQMIQVQSEEVTVDTIEQRVIETTDRAK- 231
Query: 605 SCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSR 664
P L F + + ++FC T + S LY L+ + N E++
Sbjct: 232 -----PDALRFVMDRD---------QPFLAVIFCRTKVRVSKLYDNLKGLGYNCAELHGD 277
Query: 665 KPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGR 724
PQ R+R+ + FR +K L+ +DV+ARG+D VT V IP D E YIHR+GRTGR
Sbjct: 278 IPQAKRERVMKSFREAKIQYLIATDVAARGLDVDGVTHVFNFDIPEDVESYIHRIGRTGR 337
Query: 725 EGKEGEGVLLLAPWEEYFLDDLK 747
G G + +A +E L++++
Sbjct: 338 AGGSGLAITFVAAKDEKHLEEIE 360
>gi|229103076|ref|ZP_04233764.1| ATP-dependent RNA helicase [Bacillus cereus Rock3-28]
gi|228680360|gb|EEL34549.1| ATP-dependent RNA helicase [Bacillus cereus Rock3-28]
Length = 450
Score = 218 bits (555), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 139/383 (36%), Positives = 202/383 (52%), Gaps = 41/383 (10%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
K F E GIS L G + T +QE + + GKD + +AKTGTGK++AF+LP +
Sbjct: 5 KNFLELGISETFNHTLRENGITEATPIQEKAIPVIMSGKDIIGQAKTGTGKTLAFVLPIL 64
Query: 439 EAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
E + T SS Q LI+ PTRELA QI E +L + I VL + GG
Sbjct: 65 EKI--DTESSDVQ------ALIVAPTRELALQITTEIKKMLVQREDINVLAIYGGQDVAQ 116
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
R+L+ + I+VATPGRLLDHI ++ + L L +VLDEAD +L GF D+E+I
Sbjct: 117 QLRKLKGN-THIVVATPGRLLDHIRRET---IDLSNLSTIVLDEADQMLYFGFLYDIEDI 172
Query: 559 VDCLPRRRQSLLFSATMPKEL--------------VLKREHTYIDTVGLGSVETPVKIKQ 604
+D P +Q++LFSATMPK++ ++ E +DT+ +ET + K
Sbjct: 173 LDETPGSKQTMLFSATMPKDIKKLAKRYMDEPQMIQVQSEEVTVDTIEQRVIETTDRAK- 231
Query: 605 SCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSR 664
P L F + + ++FC T + S LY L+ + N E++
Sbjct: 232 -----PDALRFVMDRD---------QPFLAVIFCRTKVRASKLYDNLKGLGYNCAELHGD 277
Query: 665 KPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGR 724
PQ R+R+ + FR +K L+ +DV+ARG+D VT V IP D E YIHR+GRTGR
Sbjct: 278 IPQAKRERVMKSFREAKIQYLIATDVAARGLDVDGVTHVFNFDIPEDVESYIHRIGRTGR 337
Query: 725 EGKEGEGVLLLAPWEEYFLDDLK 747
G G + +A +E L++++
Sbjct: 338 AGGSGLAITFVAAKDEKHLEEIE 360
>gi|423624444|ref|ZP_17600222.1| hypothetical protein IK3_03042 [Bacillus cereus VD148]
gi|401256513|gb|EJR62722.1| hypothetical protein IK3_03042 [Bacillus cereus VD148]
Length = 458
Score = 218 bits (555), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 136/383 (35%), Positives = 201/383 (52%), Gaps = 41/383 (10%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
K F E GIS L G + T +QE + + GKD + +AKTGTGK++AF+LP +
Sbjct: 5 KNFLELGISETFNHTLRENGITEATPIQEKAIPVIMSGKDIIGQAKTGTGKTLAFVLPIL 64
Query: 439 EAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
E + +S + LI+ PTRELA QI E +L + I VL + GG
Sbjct: 65 EKIDPESSD--------VQALIVAPTRELALQITTEIKKMLVQREDINVLAIYGGQDVAQ 116
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
R+L+ + I+VATPGRLLDHI ++ + L L +VLDEAD +L GF D+E+I
Sbjct: 117 QLRKLKGN-THIVVATPGRLLDHIRRET---IDLSNLSTIVLDEADQMLYFGFLYDIEDI 172
Query: 559 VDCLPRRRQSLLFSATMPKEL--------------VLKREHTYIDTVGLGSVETPVKIKQ 604
+D P +Q++LFSATMPK++ ++ E +DT+ +ET + K
Sbjct: 173 LDETPGSKQTMLFSATMPKDIKKLAKRYMDEPQMIQVQSEEVTVDTIEQRVIETTDRAK- 231
Query: 605 SCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSR 664
P L F + + ++FC T + S LY L+ + N E++
Sbjct: 232 -----PDALRFVMDRD---------QPFLAVIFCRTKVRASKLYDNLKGLGYNCAELHGD 277
Query: 665 KPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGR 724
PQ R+R+ + FR +K L+ +DV+ARG+D VT V IP D E YIHR+GRTGR
Sbjct: 278 IPQAKRERVMKSFREAKIQYLIATDVAARGLDVDGVTHVFNYDIPEDVESYIHRIGRTGR 337
Query: 725 EGKEGEGVLLLAPWEEYFLDDLK 747
G G + +A +E L++++
Sbjct: 338 AGGSGLAITFVAAKDEKHLEEIE 360
>gi|229100254|ref|ZP_04231145.1| ATP-dependent RNA helicase [Bacillus cereus Rock3-29]
gi|229115941|ref|ZP_04245337.1| ATP-dependent RNA helicase [Bacillus cereus Rock1-3]
gi|423379736|ref|ZP_17357020.1| hypothetical protein IC9_03089 [Bacillus cereus BAG1O-2]
gi|423442772|ref|ZP_17419678.1| hypothetical protein IEA_03102 [Bacillus cereus BAG4X2-1]
gi|423447032|ref|ZP_17423911.1| hypothetical protein IEC_01640 [Bacillus cereus BAG5O-1]
gi|423465872|ref|ZP_17442640.1| hypothetical protein IEK_03059 [Bacillus cereus BAG6O-1]
gi|423535187|ref|ZP_17511605.1| hypothetical protein IGI_03019 [Bacillus cereus HuB2-9]
gi|423539565|ref|ZP_17515956.1| hypothetical protein IGK_01657 [Bacillus cereus HuB4-10]
gi|423545787|ref|ZP_17522145.1| hypothetical protein IGO_02222 [Bacillus cereus HuB5-5]
gi|228667530|gb|EEL22976.1| ATP-dependent RNA helicase [Bacillus cereus Rock1-3]
gi|228683149|gb|EEL37136.1| ATP-dependent RNA helicase [Bacillus cereus Rock3-29]
gi|401131028|gb|EJQ38682.1| hypothetical protein IEC_01640 [Bacillus cereus BAG5O-1]
gi|401175559|gb|EJQ82761.1| hypothetical protein IGK_01657 [Bacillus cereus HuB4-10]
gi|401182047|gb|EJQ89190.1| hypothetical protein IGO_02222 [Bacillus cereus HuB5-5]
gi|401632212|gb|EJS50000.1| hypothetical protein IC9_03089 [Bacillus cereus BAG1O-2]
gi|402414180|gb|EJV46516.1| hypothetical protein IEA_03102 [Bacillus cereus BAG4X2-1]
gi|402416794|gb|EJV49108.1| hypothetical protein IEK_03059 [Bacillus cereus BAG6O-1]
gi|402462303|gb|EJV94011.1| hypothetical protein IGI_03019 [Bacillus cereus HuB2-9]
Length = 450
Score = 218 bits (555), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 136/383 (35%), Positives = 201/383 (52%), Gaps = 41/383 (10%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
K F E GIS L G + T +QE + + GKD + +AKTGTGK++AF+LP +
Sbjct: 5 KNFLELGISETFNHTLRENGITEATPIQEKAIPVIMSGKDIIGQAKTGTGKTLAFVLPIL 64
Query: 439 EAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
E + +S + LI+ PTRELA QI E +L + I VL + GG
Sbjct: 65 EKIDPESSD--------VQALIVAPTRELALQITTEIKKMLVQREDINVLAIYGGQDVAQ 116
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
R+L+ + I+VATPGRLLDHI ++ + L L +VLDEAD +L GF D+E+I
Sbjct: 117 QLRKLKGN-THIVVATPGRLLDHIRRET---IDLSNLSTIVLDEADQMLYFGFLYDIEDI 172
Query: 559 VDCLPRRRQSLLFSATMPKEL--------------VLKREHTYIDTVGLGSVETPVKIKQ 604
+D P +Q++LFSATMPK++ ++ E +DT+ +ET + K
Sbjct: 173 LDETPGSKQTMLFSATMPKDIKKLAKRYMDEPQMIQVQSEEVTVDTIEQRVIETTDRAK- 231
Query: 605 SCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSR 664
P L F + + ++FC T + S LY L+ + N E++
Sbjct: 232 -----PDALRFVMDRD---------QPFLAVIFCRTKVRASKLYDNLKGLGYNCAELHGD 277
Query: 665 KPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGR 724
PQ R+R+ + FR +K L+ +DV+ARG+D VT V IP D E YIHR+GRTGR
Sbjct: 278 IPQAKRERVMKSFREAKIQYLIATDVAARGLDVDGVTHVFNYDIPEDVESYIHRIGRTGR 337
Query: 725 EGKEGEGVLLLAPWEEYFLDDLK 747
G G + +A +E L++++
Sbjct: 338 AGGSGLAITFVAAKDEKHLEEIE 360
>gi|146418687|ref|XP_001485309.1| hypothetical protein PGUG_03038 [Meyerozyma guilliermondii ATCC
6260]
Length = 569
Score = 218 bits (555), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 164/484 (33%), Positives = 260/484 (53%), Gaps = 52/484 (10%)
Query: 363 NGEKKEKREEEPILSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVK 422
N + + +E +F++ G+S T++A+ G+ +MT+VQE T+ L G+D +
Sbjct: 89 NALQPYAQADESTSGSDKFEDLGLSEPTMRAIKDMGFEKMTKVQEKTIPPLLAGRDVLGA 148
Query: 423 AKTGTGKSIAFLLPAIEAV--LKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLK 480
AKTG+GK++AFL+PAIE + LK + T V+++ PTRELA QI A L+
Sbjct: 149 AKTGSGKTLAFLIPAIEMLYSLKFKPRNGTG------VIVVSPTRELALQIFGVARDLMA 202
Query: 481 NHD-GIGVLTLVGGTRFKVDQRRLESDP----CQILVATPGRLLDHIENKSGLSVRLMGL 535
+H +G+ ++GG RR E+D +L+ATPGRLLDH++N G + L
Sbjct: 203 HHSQTLGI--VIGGA-----NRRQEADKLMKGVNLLIATPGRLLDHLQNTKGFIFK--NL 253
Query: 536 KMLVLDEADHLLDLGFRKDVENIVDCLPR-RRQSLLFSATMPKE------LVLKREHTYI 588
K LV+DEAD +L++GF +++ I+ LP RQS+LFSAT + + L+ YI
Sbjct: 254 KALVIDEADRILEIGFEDEMKQIIKVLPSDERQSMLFSATQTTKVEDLARISLRAGPLYI 313
Query: 589 DTVGLGSVETPVKIKQSCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLY 648
+ V V T ++Q + ++ F +L L+ +I K+IVF S+
Sbjct: 314 NVVPETEVSTADGLEQGYVTCDSDMRFLLLFSFLRRNI----KKKIIVFLSSCNCVKYFG 369
Query: 649 LLLREMKMNVREMYSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGI 708
LL + + V +++ ++ Q R EF +K+ IL+ +DV+ARG+D P V ++Q
Sbjct: 370 ELLNYIDLPVLDLHGKQKQQKRTNTFFEFCNAKQGILICTDVAARGLDIPAVDWIIQFDP 429
Query: 709 PPDREQYIHRLGRTGR-EGKEGEGVLLLAPWEEYFLDDLK--DLPLDKLQLP-HLNPEIQ 764
P D YIHR+GRT R G +G+ ++ L P E FL LK ++PL++ + P + IQ
Sbjct: 430 PDDPRDYIHRVGRTARGTGGKGKSLMFLTPSELGFLRYLKAANVPLNEYEFPTNKIANIQ 489
Query: 765 LQMDNHMAKIDNNVKEAA---YHAWLGYYNS-----IREIGRDKTTLVELANKFAQSIGL 816
Q+ + K + + ++A Y A+L Y S + +I DK LV K A+S G
Sbjct: 490 SQL-TKLIKGNYWLHQSAKDGYRAYLQAYASHHLKTVYQI--DKLDLV----KVAKSFGF 542
Query: 817 QRPP 820
PP
Sbjct: 543 DVPP 546
>gi|225558597|gb|EEH06881.1| ATP-dependent RNA helicase DBP4 [Ajellomyces capsulatus G186AR]
Length = 810
Score = 218 bits (555), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 153/473 (32%), Positives = 245/473 (51%), Gaps = 34/473 (7%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F + +S T L+A + +T +Q + L+G+D + AKTG+GK++AFL+P +E
Sbjct: 51 FSDLPLSEPTADGLSACHFKSLTDIQARAIPHALKGRDILGAAKTGSGKTLAFLVPLLEL 110
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+ + + L L+L PTRELA QI E + + H ++GG + +Q
Sbjct: 111 LYRKQWTEYDGL----GALVLSPTRELAIQIF-EVLRKIGRHHTFSAGLVIGGKGLQEEQ 165
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
RL ILV TPGR+L H++ + +++LVLDEAD ++D+GF+ V+ I+D
Sbjct: 166 ERLGK--MNILVCTPGRMLQHMDQTAAFDTN--HIQLLVLDEADRIMDMGFQSTVDAIID 221
Query: 561 CLPRRRQSLLFSATMPKEL-----VLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHF 615
LP+ RQ++LFSAT K++ + R+ Y+ + TP K++Q+ ++ P
Sbjct: 222 HLPKERQTMLFSATQTKKVSDLARLSLRDPEYVSVHETAASATPAKLQQNYIITPLPEKL 281
Query: 616 QILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNV--REMYSRKPQLYRDRI 673
L ++ + K+IVF S+G +Y R M+ + ++ R+ Q R I
Sbjct: 282 DTLWSFIRSSLKS----KIIVFFSSGKQVRFVYESFRHMRPGIPLLHLHGRQKQGARVDI 337
Query: 674 SEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVL 733
+++F A+K L +D++ARG+D+P V V+QV P D + YIHR GRT R + G VL
Sbjct: 338 TKKFSAAKYSCLFATDIAARGLDFPAVDWVIQVDCPEDADTYIHRAGRTARYERNGRAVL 397
Query: 734 LLAPWEEYFLDDLKDLPLDKLQLPHLN------PEIQLQMDNHMAKIDNNVKEAAYHAWL 787
L P EE + LK L K+ + +N I+ Q+ N M D ++K A++
Sbjct: 398 FLEPSEEAGM--LKRLEQKKIPIEKINVRSKKQQSIKNQLQN-MCFKDPSLKYLGQKAFI 454
Query: 788 GYYNSIREIGRDKTTLV--ELA-NKFAQSIGLQRPPPL-FRKTALKMGLKDIP 836
Y SI + RDK V +L ++A S+GL P + F K LK+ P
Sbjct: 455 SYVKSIH-VQRDKEVFVVKDLPLQEYAASLGLPGAPRIKFIKGEDSKKLKNAP 506
>gi|423605778|ref|ZP_17581671.1| hypothetical protein IIK_02359 [Bacillus cereus VD102]
gi|401243133|gb|EJR49504.1| hypothetical protein IIK_02359 [Bacillus cereus VD102]
Length = 454
Score = 218 bits (555), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 137/376 (36%), Positives = 202/376 (53%), Gaps = 19/376 (5%)
Query: 375 ILSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFL 434
+++ K F E GIS L G + T +QE + L GKD + +AKTGTGK++AF+
Sbjct: 1 MVNVKNFLELGISETFNHTLRENGITEATPIQEKAIPVILSGKDIIGQAKTGTGKTLAFV 60
Query: 435 LPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGT 494
LP +E + S + LI+ PTRELA QI E +L + I VL + GG
Sbjct: 61 LPILEKIDPECSD--------VQALIVAPTRELALQITTEIKKMLVQREDINVLAIYGGQ 112
Query: 495 RFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKD 554
R+L+ + I+VATPGRLLDHI ++ + L L +VLDEAD +L GF D
Sbjct: 113 DVAQQLRKLKGN-THIVVATPGRLLDHIRRET---IDLSNLTTIVLDEADQMLYFGFLYD 168
Query: 555 VENIVDCLPRRRQSLLFSATMPKEL--VLKREHTYIDTVGLGSVETPVK-IKQSCLVAPH 611
+E+I+D P +Q++LFSATMPK++ + KR V + S E V I+Q +
Sbjct: 169 IEDILDETPGSKQTMLFSATMPKDIKKLAKRYMDEPQMVQVQSEEVTVNTIEQRVIETTD 228
Query: 612 ELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRD 671
L ++ + ++FC T + S LY L+ + N E++ PQ R+
Sbjct: 229 RAKPDALRFVMDRD----QPFLAVIFCRTKVRASKLYDNLKGLGYNCAELHGDIPQAKRE 284
Query: 672 RISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEG 731
R+ + FR +K L+ +DV+ARG+D VT V IP D E YIHR+GRTGR G G
Sbjct: 285 RVMKSFREAKIQYLIATDVAARGLDVDGVTHVFNYDIPEDVESYIHRIGRTGRAGGSGIA 344
Query: 732 VLLLAPWEEYFLDDLK 747
+ +A +E L++++
Sbjct: 345 ITFVAAKDEKHLEEIE 360
>gi|344233534|gb|EGV65406.1| hypothetical protein CANTEDRAFT_129665 [Candida tenuis ATCC 10573]
Length = 763
Score = 218 bits (555), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 146/462 (31%), Positives = 243/462 (52%), Gaps = 38/462 (8%)
Query: 380 RFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIE 439
+F IS T+K LT + ++++T +Q+ ++ L+G+D + AKTG+GK++AFL+P +E
Sbjct: 46 QFSHLPISQNTLKGLTDSSFMKLTDIQKRSIPYALKGEDIMATAKTGSGKTLAFLIPTME 105
Query: 440 AVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVD 499
+L+ + L LIL PTRELA QI E + + H+ + GG K +
Sbjct: 106 ILLRNNITEFDGLA----ALILSPTRELAVQIF-EVLKKIGAHNQFSAGLVTGGKDVKYE 160
Query: 500 QRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIV 559
+ R+ ILV TPGR+ H+ G+ L++LVLDEAD LD+GF+ ++NIV
Sbjct: 161 KDRVSR--MNILVGTPGRVAQHLNESVGMETS--NLQVLVLDEADRCLDMGFKSQIDNIV 216
Query: 560 DCLPRRRQSLLFSATMPKEL--VLKREHTYIDTVGLGS----VETPVKIKQSCLVAPHEL 613
LP+ RQ+LLFSAT + + + T +G+ S TP + Q + P E
Sbjct: 217 GHLPKTRQTLLFSATTTDSVKDLARLSLTNPRRIGVSSDSDISATPDSLDQYYIKIPLEE 276
Query: 614 HFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK--MNVREMYSRKPQLYRD 671
+L +K H+ + K++VF S+ Y R+++ +++ ++Y R Q R
Sbjct: 277 KLDVLWSFIKSHL----NSKILVFFSSSKQVQFTYETFRKLQPGISLLKLYGRHKQTARL 332
Query: 672 RISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEG 731
+ +F ++ L +D+ ARG+D+P + VVQ+ P D Y+HR+GR R G+EG+
Sbjct: 333 ETTTKFSQAQHACLFATDIVARGLDFPAIDWVVQIDCPEDAATYVHRVGRAARFGREGKS 392
Query: 732 VLLLAPWEEY-FLDDLKDLPLDKLQL-------PHLNPEIQLQMDNHMAKIDNNVKEAAY 783
+L+L P EE FL L+++ +D + + P++Q + D +K
Sbjct: 393 LLMLLPSEEEGFLKRLENMKIDIKMMNIKQKSKKTIRPQLQ-----SLCFQDPTIKNLGQ 447
Query: 784 HAWLGYYNSIREIGRDKTT--LVELANK-FAQSIGLQRPPPL 822
A++ YY S+ I +DK + EL + +A S+GL P +
Sbjct: 448 RAFISYYRSVY-IQKDKDVFKVEELPTETYAASLGLPGAPKI 488
>gi|165869135|ref|ZP_02213795.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Bacillus
anthracis str. A0488]
gi|167641387|ref|ZP_02399638.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Bacillus
anthracis str. A0193]
gi|170704569|ref|ZP_02895035.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Bacillus
anthracis str. A0389]
gi|177649201|ref|ZP_02932203.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Bacillus
anthracis str. A0174]
gi|190565289|ref|ZP_03018209.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Bacillus
anthracis str. Tsiankovskii-I]
gi|229603661|ref|YP_002866798.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Bacillus
anthracis str. A0248]
gi|254685050|ref|ZP_05148910.1| ATP-dependent RNA helicase [Bacillus anthracis str. CNEVA-9066]
gi|254722456|ref|ZP_05184244.1| ATP-dependent RNA helicase [Bacillus anthracis str. A1055]
gi|254737496|ref|ZP_05195199.1| ATP-dependent RNA helicase [Bacillus anthracis str. Western North
America USA6153]
gi|254743317|ref|ZP_05201002.1| ATP-dependent RNA helicase [Bacillus anthracis str. Kruger B]
gi|254751811|ref|ZP_05203848.1| ATP-dependent RNA helicase [Bacillus anthracis str. Vollum]
gi|254760330|ref|ZP_05212354.1| ATP-dependent RNA helicase [Bacillus anthracis str. Australia 94]
gi|164715861|gb|EDR21378.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Bacillus
anthracis str. A0488]
gi|167510664|gb|EDR86059.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Bacillus
anthracis str. A0193]
gi|170130370|gb|EDS99231.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Bacillus
anthracis str. A0389]
gi|172084275|gb|EDT69333.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Bacillus
anthracis str. A0174]
gi|190563316|gb|EDV17281.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Bacillus
anthracis str. Tsiankovskii-I]
gi|229268069|gb|ACQ49706.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Bacillus
anthracis str. A0248]
Length = 447
Score = 218 bits (555), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 136/383 (35%), Positives = 201/383 (52%), Gaps = 41/383 (10%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
K F E GIS L G + T +QE + L GKD + +AKTGTGK++AF+LP +
Sbjct: 2 KNFLELGISETFNHTLRENGITEATPIQEKAIPVILSGKDIIGQAKTGTGKTLAFVLPIL 61
Query: 439 EAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
E + +S + LI+ PTRELA QI E +L + I VL + GG
Sbjct: 62 EKIDPESSD--------VQALIVAPTRELALQITTEIKKMLVQREDINVLAIYGGQDVAQ 113
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
R+L+ + I+VATPGRLLDHI ++ + L L +VLDEAD +L GF D+E+I
Sbjct: 114 QLRKLKGN-THIVVATPGRLLDHIRRET---IDLSNLSTIVLDEADQMLYFGFLYDIEDI 169
Query: 559 VDCLPRRRQSLLFSATMPKEL--------------VLKREHTYIDTVGLGSVETPVKIKQ 604
+D P +Q++LFSAT+PK++ ++ E +DT+ +ET + K
Sbjct: 170 LDETPGSKQTMLFSATIPKDIKKLAKRYMDEPQMIQVQSEEVTVDTIEQRVIETTDRAK- 228
Query: 605 SCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSR 664
P L F + + ++FC T + S LY L+ + N E++
Sbjct: 229 -----PDALRFVMDRD---------QPFLAVIFCRTKVRASKLYDNLKGLGYNCAELHGD 274
Query: 665 KPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGR 724
PQ R+R+ + FR +K L+ +DV+ARG+D VT V IP D E YIHR+GRTGR
Sbjct: 275 IPQAKRERVMKSFREAKIQYLIATDVAARGLDVDGVTHVFNYDIPEDVESYIHRIGRTGR 334
Query: 725 EGKEGEGVLLLAPWEEYFLDDLK 747
G G + +A +E L++++
Sbjct: 335 AGGSGLAITFVAAKDEKHLEEIE 357
>gi|421891297|ref|ZP_16322106.1| ATP-dependent RNA helicase, deaD-box family [Ralstonia solanacearum
K60-1]
gi|378963340|emb|CCF98854.1| ATP-dependent RNA helicase, deaD-box family [Ralstonia solanacearum
K60-1]
Length = 495
Score = 218 bits (555), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 133/373 (35%), Positives = 205/373 (54%), Gaps = 10/373 (2%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
FD G+ P ++ALT +GY + T +Q A + + G+D + A+TGTGK+ F LP I+
Sbjct: 17 FDTFGLHPDILRALTESGYTRPTPIQAAAIPVVVGGRDVMGAAQTGTGKTAGFSLPIIQN 76
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+L ++S + P+ LIL PTRELA Q+ + +A + + + GG
Sbjct: 77 LLPEANTSASPARHPVRALILTPTRELADQVY-DNVAKYAKYTALRSAVVFGGVDMNPQT 135
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
+L +ILVATPGRLLDH++ +S V L ++MLVLDEAD +LD+GF D++ I++
Sbjct: 136 EQLRRG-VEILVATPGRLLDHVQQRS---VNLSQVRMLVLDEADRMLDMGFLPDLQRIIN 191
Query: 561 CLPRRRQSLLFSATMPKELVLKREHTYI---DTVGLG-SVETPVKIKQSCLVAPHELHFQ 616
LP RQ+LLFSAT E + K +Y+ T+ + S T ++Q P
Sbjct: 192 LLPAHRQTLLFSATFSPE-IKKLAASYLRHPQTIEVARSNATADNVRQVIYTVPDGHKQA 250
Query: 617 ILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEE 676
L HLL++ + IVF ++ + S L L K+N ++ K Q+ R + E
Sbjct: 251 ALVHLLRQRAEQGLPSQCIVFSNSKIGCSRLARALEREKINANAIHGDKTQIERMQTLEA 310
Query: 677 FRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLA 736
F+ +LV +DV+ARG+D + V+ +P + E Y+HR+GRTGR G G+ + L A
Sbjct: 311 FKQGTVDVLVATDVAARGLDISQMPCVINFDLPFNAEDYVHRIGRTGRAGASGDALSLFA 370
Query: 737 PWEEYFLDDLKDL 749
P +E L D++ L
Sbjct: 371 PGDERLLADIEKL 383
>gi|228952820|ref|ZP_04114890.1| ATP-dependent RNA helicase [Bacillus thuringiensis serovar kurstaki
str. T03a001]
gi|423424574|ref|ZP_17401605.1| hypothetical protein IE5_02263 [Bacillus cereus BAG3X2-2]
gi|423506009|ref|ZP_17482599.1| hypothetical protein IG1_03573 [Bacillus cereus HD73]
gi|449089347|ref|YP_007421788.1| ATP-dependent RNA helicase [Bacillus thuringiensis serovar kurstaki
str. HD73]
gi|228806863|gb|EEM53412.1| ATP-dependent RNA helicase [Bacillus thuringiensis serovar kurstaki
str. T03a001]
gi|401113346|gb|EJQ21215.1| hypothetical protein IE5_02263 [Bacillus cereus BAG3X2-2]
gi|402448940|gb|EJV80778.1| hypothetical protein IG1_03573 [Bacillus cereus HD73]
gi|449023104|gb|AGE78267.1| ATP-dependent RNA helicase [Bacillus thuringiensis serovar kurstaki
str. HD73]
Length = 458
Score = 218 bits (555), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 136/383 (35%), Positives = 201/383 (52%), Gaps = 41/383 (10%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
K F E GIS L G + T +QE + + GKD + +AKTGTGK++AF+LP +
Sbjct: 5 KNFLELGISETFNHTLRENGITEATPIQEQAIPVIMSGKDIIGQAKTGTGKTLAFVLPIL 64
Query: 439 EAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
E + +S + LI+ PTRELA QI E +L + I VL + GG
Sbjct: 65 EKIDSESSD--------VQALIVAPTRELALQITTEIKKMLVQREDINVLAIYGGQDVAQ 116
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
R+L+ + I+VATPGRLLDHI ++ + L L +VLDEAD +L GF D+E+I
Sbjct: 117 QLRKLKGN-THIVVATPGRLLDHIRRET---IDLSNLSTIVLDEADQMLYFGFLYDIEDI 172
Query: 559 VDCLPRRRQSLLFSATMPKEL--------------VLKREHTYIDTVGLGSVETPVKIKQ 604
+D P +Q++LFSATMPK++ ++ E +DT+ +ET + K
Sbjct: 173 LDETPGSKQTMLFSATMPKDIKKLAKRYMDEPQMIQVQSEEVTVDTIEQRVIETTDRAK- 231
Query: 605 SCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSR 664
P L F + + ++FC T + S LY L+ + N E++
Sbjct: 232 -----PDALRFVMDRD---------QPFLAVIFCRTKLRVSKLYDNLKGLGYNCAELHGD 277
Query: 665 KPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGR 724
PQ R+R+ + FR +K L+ +DV+ARG+D VT V IP D E YIHR+GRTGR
Sbjct: 278 IPQAKRERVMKSFREAKIQYLIATDVAARGLDVDGVTHVFNFDIPEDVESYIHRIGRTGR 337
Query: 725 EGKEGEGVLLLAPWEEYFLDDLK 747
G G + +A +E L++++
Sbjct: 338 AGGSGLAITFVAAKDEKHLEEIE 360
>gi|423402905|ref|ZP_17380078.1| hypothetical protein ICW_03303 [Bacillus cereus BAG2X1-2]
gi|423476466|ref|ZP_17453181.1| hypothetical protein IEO_01924 [Bacillus cereus BAG6X1-1]
gi|401650038|gb|EJS67613.1| hypothetical protein ICW_03303 [Bacillus cereus BAG2X1-2]
gi|402433362|gb|EJV65414.1| hypothetical protein IEO_01924 [Bacillus cereus BAG6X1-1]
Length = 446
Score = 218 bits (555), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 136/373 (36%), Positives = 201/373 (53%), Gaps = 21/373 (5%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
K F E GIS L G + T +QE + + GKD + +AKTGTGK++AF+LP +
Sbjct: 5 KNFLELGISETFNHTLRENGITEATPIQEKAIPVIMSGKDIIGQAKTGTGKTLAFVLPIL 64
Query: 439 EAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
E + +S + LI+ PTRELA QI E +L + I VL + GG
Sbjct: 65 EKIDPESSD--------VQALIVAPTRELALQITTEIKKMLVQREDINVLAIYGGQDVAQ 116
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
R+L+ + I+VATPGRLLDHI ++ + L L +VLDEAD +L GF D+E+I
Sbjct: 117 QLRKLKGN-THIVVATPGRLLDHIRRET---IDLSNLSTIVLDEADQMLYFGFLYDIEDI 172
Query: 559 VDCLPRRRQSLLFSATMPKELVLKREHTYID---TVGLGSVETPVK-IKQSCLVAPHELH 614
+D P +Q++LFSATMPK+ + K Y+D + + S E V I+Q +
Sbjct: 173 LDETPDSKQTMLFSATMPKD-IKKLAKRYMDEPQMIQVQSEEVTVNTIEQRVIETTDRAK 231
Query: 615 FQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRIS 674
L ++ + ++FC T + S LY L+ + N E++ PQ R+R+
Sbjct: 232 PDALRFVMDRD----QPFLAVIFCRTKVRASKLYDNLKGLGYNCAELHGDIPQAKRERVM 287
Query: 675 EEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLL 734
+ FR +K L+ +DV+ARG+D VT V IP D E YIHR+GRTGR G G +
Sbjct: 288 KSFREAKIQYLIATDVAARGLDVDGVTHVFNFDIPEDVESYIHRIGRTGRAGGSGIAITF 347
Query: 735 LAPWEEYFLDDLK 747
+A +E L++++
Sbjct: 348 VAAKDEKHLEEIE 360
>gi|17546930|ref|NP_520332.1| ATP-dependent RNA helicase [Ralstonia solanacearum GMI1000]
gi|17429230|emb|CAD15918.1| probable atp-dependent rna helicase protein [Ralstonia solanacearum
GMI1000]
Length = 495
Score = 218 bits (555), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 132/373 (35%), Positives = 203/373 (54%), Gaps = 10/373 (2%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
FD G+ P ++AL +GY + T +Q A + + G+D + A+TGTGK+ F LP I+
Sbjct: 17 FDTFGLHPDILRALAESGYTRATPIQAAAIPVVIAGRDVMGAAQTGTGKTAGFSLPIIQN 76
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+L ++S + P+ LIL PTRELA Q+ + +A H + + GG
Sbjct: 77 LLPDANTSASPARHPVRALILTPTRELADQVY-DNVAKYAKHTALRSAVVFGGVDMNPQT 135
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
+L ++LVATPGRLLDH++ +S V L ++MLVLDEAD +LD+GF D++ I++
Sbjct: 136 EQLRRG-VEVLVATPGRLLDHVQQRS---VNLSQVRMLVLDEADRMLDMGFLPDLQRIIN 191
Query: 561 CLPRRRQSLLFSATMPKELVLKREHTYI---DTVGLG-SVETPVKIKQSCLVAPHELHFQ 616
LP RQ+LLFSAT E + K +Y+ T+ + S T ++Q P
Sbjct: 192 LLPAHRQTLLFSATFSPE-IKKLAASYLRHPQTIEVARSNATADNVRQVIYTVPDGHKQA 250
Query: 617 ILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEE 676
L HLL++ + IVF ++ + S L L K+N ++ K Q R + E
Sbjct: 251 ALVHLLRQRAEQGLPSQCIVFSNSKIGCSRLARALEREKINANAIHGDKTQTERMQTLEA 310
Query: 677 FRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLA 736
F+ +LV +DV+ARG+D + V+ +P + E Y+HR+GRTGR G G+ + L A
Sbjct: 311 FKQGTVDVLVATDVAARGLDISQMPCVINFDLPFNAEDYVHRIGRTGRAGASGDALSLFA 370
Query: 737 PWEEYFLDDLKDL 749
P +E L D++ L
Sbjct: 371 PGDERLLADIEKL 383
>gi|346465817|gb|AEO32753.1| hypothetical protein [Amblyomma maculatum]
Length = 580
Score = 218 bits (555), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 176/512 (34%), Positives = 277/512 (54%), Gaps = 48/512 (9%)
Query: 339 EDEHDFEEQ-VELIRKEISKNKLNGNGEKKEKREEEP---------ILSQKRFD--ECGI 386
EDE EEQ + + +E K+K + ++ + E EP +LS RF + +
Sbjct: 32 EDEMASEEQPTQDVLEEDDKDKGAVSADEAKAMETEPEPLPGTSFGVLSDTRFSSLQGKV 91
Query: 387 SPLTIKALT-AAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKAT 445
S T+KA+T G+ QMT +Q T+ LEG+D V AKTG+GK++AFL+PA+E +
Sbjct: 92 SEATLKAITETMGFKQMTEIQAKTIPHLLEGRDVVAAAKTGSGKTLAFLVPAVELL---- 147
Query: 446 SSSTTQLVP--PIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRL 503
S + +P L++ PTRELA Q LL + L ++GGT + + +L
Sbjct: 148 --SKLKFMPRNGTGALVIAPTRELAMQTFGVLQELLSGQNQTLGL-IMGGTNRQSEAAKL 204
Query: 504 ESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLP 563
+ +LVATPGRLLDH++N S + L+ L++DEAD +LD+GF ++++ I+ LP
Sbjct: 205 -AKGVNLLVATPGRLLDHLQNTSEFVYK--NLQCLIIDEADRILDIGFEEEMKQILRILP 261
Query: 564 RRRQSLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQI 617
+RRQ++LFSAT+ K+ + LK E YI T ++Q +V P + F +
Sbjct: 262 KRRQTMLFSATLTKKTEDLVKVALKSEPLYIGLDEGKEQATVEGLEQGYVVCPSDKRFLL 321
Query: 618 LHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEF 677
L LK++ KV+VF S+ + + LL + + V ++ ++ Q R +F
Sbjct: 322 LFTFLKKN----RKKKVMVFFSSCLSVKYHHELLNYIDLPVMSIHGKQKQAKRTTTFFQF 377
Query: 678 RASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGR-EGKEGEGVLLLA 736
S+ IL+ +DV+ARG+D P+V +VQ P D ++YIHR+GRT R EG G +L+L
Sbjct: 378 CNSECGILLCTDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTARGEGGRGHALLILR 437
Query: 737 PWEEYFLDDLK--DLPLDKLQLPHLN-PEIQLQMDNHMAK---IDNNVKEAAYHAWLGYY 790
P E FL LK +PL + + IQ Q++ ++K + + KE AY A++ Y
Sbjct: 438 PEEVGFLRYLKVAKVPLQEFEFSWSKIANIQPQLEKLISKNYYLHMSAKE-AYKAYVRAY 496
Query: 791 NS--IREIGRDKTTLVELANKFAQSIGLQRPP 820
+S ++ I D TL + + A+S G PP
Sbjct: 497 DSHHLKSI-FDVNTLDLI--QVAKSFGFLVPP 525
>gi|423435903|ref|ZP_17412884.1| hypothetical protein IE9_02084 [Bacillus cereus BAG4X12-1]
gi|401123386|gb|EJQ31162.1| hypothetical protein IE9_02084 [Bacillus cereus BAG4X12-1]
Length = 446
Score = 218 bits (555), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 136/383 (35%), Positives = 201/383 (52%), Gaps = 41/383 (10%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
K F E GIS L G + T +QE + + GKD + +AKTGTGK++AF+LP +
Sbjct: 5 KNFLELGISETFNHTLRENGITEATPIQEQAIPVIMSGKDIIGQAKTGTGKTLAFVLPIL 64
Query: 439 EAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
E + +S + LI+ PTRELA QI E +L + I VL + GG
Sbjct: 65 EKIDSESSD--------VQALIVAPTRELALQITTEIKKMLVQREDINVLAIYGGQDVAQ 116
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
R+L+ + I+VATPGRLLDHI ++ + L L +VLDEAD +L GF D+E+I
Sbjct: 117 QLRKLKGN-THIVVATPGRLLDHIRRET---IDLSNLSTIVLDEADQMLYFGFLYDIEDI 172
Query: 559 VDCLPRRRQSLLFSATMPKEL--------------VLKREHTYIDTVGLGSVETPVKIKQ 604
+D P +Q++LFSATMPK++ ++ E +DT+ +ET + K
Sbjct: 173 LDETPGSKQTMLFSATMPKDIKKLAKRYMDEPQMIQVQSEEVTVDTIEQRVIETTDRAK- 231
Query: 605 SCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSR 664
P L F + + ++FC T + S LY L+ + N E++
Sbjct: 232 -----PDALRFVMDRD---------QPFLAVIFCRTKLRVSKLYDNLKGLGYNCAELHGD 277
Query: 665 KPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGR 724
PQ R+R+ + FR +K L+ +DV+ARG+D VT V IP D E YIHR+GRTGR
Sbjct: 278 IPQAKRERVMKSFREAKIQYLIATDVAARGLDVDGVTHVFNFDIPEDVESYIHRIGRTGR 337
Query: 725 EGKEGEGVLLLAPWEEYFLDDLK 747
G G + +A +E L++++
Sbjct: 338 AGGSGLAITFVAAKDEKHLEEIE 360
>gi|229069971|ref|ZP_04203249.1| ATP-dependent RNA helicase [Bacillus cereus F65185]
gi|228713171|gb|EEL65068.1| ATP-dependent RNA helicase [Bacillus cereus F65185]
Length = 458
Score = 218 bits (555), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 136/383 (35%), Positives = 201/383 (52%), Gaps = 41/383 (10%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
K F E GIS L G + T +QE + + GKD + +AKTGTGK++AF+LP +
Sbjct: 5 KNFLELGISETFNHTLRENGITEATPIQEQAIPVIMSGKDIIGQAKTGTGKTLAFVLPIL 64
Query: 439 EAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
E + +S + LI+ PTRELA QI E +L + I VL + GG
Sbjct: 65 EKIDSESSD--------VQALIVAPTRELALQITTEIKKMLVQREDINVLAIYGGQDVAQ 116
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
R+L+ + I+VATPGRLLDHI ++ + L L +VLDEAD +L GF D+E+I
Sbjct: 117 QLRKLKGN-THIVVATPGRLLDHIRRET---IDLSNLSTIVLDEADQMLYFGFLYDIEDI 172
Query: 559 VDCLPRRRQSLLFSATMPKEL--------------VLKREHTYIDTVGLGSVETPVKIKQ 604
+D P +Q++LFSATMPK++ ++ E +DT+ +ET + K
Sbjct: 173 LDETPGSKQTMLFSATMPKDIKKLAKRYMDEPQMIQVQSEEVTVDTIEQRVIETTDRAK- 231
Query: 605 SCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSR 664
P L F + + ++FC T + S LY L+ + N E++
Sbjct: 232 -----PDALRFVMDRD---------QPFLAVIFCRTKLRVSKLYDNLKGLGYNCAELHGD 277
Query: 665 KPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGR 724
PQ R+R+ + FR +K L+ +DV+ARG+D VT V IP D E YIHR+GRTGR
Sbjct: 278 IPQAKRERVMKSFREAKIQYLIATDVAARGLDVDGVTHVFNFDIPEDVESYIHRIGRTGR 337
Query: 725 EGKEGEGVLLLAPWEEYFLDDLK 747
G G + +A +E L++++
Sbjct: 338 AGGSGLAITFVAAKDEKHLEEIE 360
>gi|83746502|ref|ZP_00943553.1| ATP-dependent RNA helicase [Ralstonia solanacearum UW551]
gi|83726833|gb|EAP73960.1| ATP-dependent RNA helicase [Ralstonia solanacearum UW551]
Length = 566
Score = 218 bits (554), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 133/373 (35%), Positives = 205/373 (54%), Gaps = 10/373 (2%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
FD G+ P ++ALT +GY + T +Q A + + G+D + A+TGTGK+ F LP I+
Sbjct: 88 FDTFGLHPDILRALTESGYTRPTPIQAAAIPVVVGGRDVMGAAQTGTGKTAGFSLPIIQN 147
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+L ++S + P+ LIL PTRELA Q+ + +A + + + GG
Sbjct: 148 LLPEANTSASPARHPVRALILTPTRELADQVY-DNVAKYAKYTALRSAVVFGGVDMNPQT 206
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
+L +ILVATPGRLLDH++ +S V L ++MLVLDEAD +LD+GF D++ I++
Sbjct: 207 EQLRRG-VEILVATPGRLLDHVQQRS---VNLSQVRMLVLDEADRMLDMGFLPDLQRIIN 262
Query: 561 CLPRRRQSLLFSATMPKELVLKREHTYI---DTVGLG-SVETPVKIKQSCLVAPHELHFQ 616
LP RQ+LLFSAT E + K +Y+ T+ + S T ++Q P
Sbjct: 263 LLPAHRQTLLFSATFSPE-IKKLAASYLRHPQTIEVARSNATADNVRQVIYTVPDGHKQA 321
Query: 617 ILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEE 676
L HLL++ + IVF ++ + S L L K+N ++ K Q+ R + E
Sbjct: 322 ALVHLLRQRAEQGLPSQCIVFSNSKIGCSRLARALEREKINANAIHGDKTQIERMQTLEA 381
Query: 677 FRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLA 736
F+ +LV +DV+ARG+D + V+ +P + E Y+HR+GRTGR G G+ + L A
Sbjct: 382 FKQGTVDVLVATDVAARGLDISQMPCVINFDLPFNAEDYVHRIGRTGRAGASGDALSLFA 441
Query: 737 PWEEYFLDDLKDL 749
P +E L D++ L
Sbjct: 442 PGDERLLADIEKL 454
>gi|229150655|ref|ZP_04278869.1| ATP-dependent RNA helicase [Bacillus cereus m1550]
gi|228632742|gb|EEK89357.1| ATP-dependent RNA helicase [Bacillus cereus m1550]
Length = 454
Score = 218 bits (554), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 137/383 (35%), Positives = 202/383 (52%), Gaps = 41/383 (10%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
K F E GIS L G + T +QE + + GKD + +AKTGTGK++AF+LP +
Sbjct: 5 KNFLELGISETFNHTLRENGITEATPIQEQAIPVIMSGKDIIGQAKTGTGKTLAFVLPIL 64
Query: 439 EAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
E + +S + LI+ PTRELA QI E +L + I VL + GG
Sbjct: 65 EKIDPESSD--------VQALIVAPTRELALQITTEIKKMLVQREDINVLAIYGGQDVAQ 116
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
R+L+ + I+VATPGRLLDHI ++ + L L +VLDEAD +L GF D+E+I
Sbjct: 117 QLRKLKGN-THIVVATPGRLLDHIRRET---IDLSNLSTIVLDEADQMLYFGFLYDIEDI 172
Query: 559 VDCLPRRRQSLLFSATMPKEL--------------VLKREHTYIDTVGLGSVETPVKIKQ 604
+D P +Q++LFSATMPK++ ++ E +DT+ +ET + K
Sbjct: 173 LDETPDSKQTMLFSATMPKDIKKLAKRYMDEPQMIQVQSEEVTVDTIEQRVIETTDRAK- 231
Query: 605 SCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSR 664
P L F I+ + ++FC T + S LY L+ + N E++
Sbjct: 232 -----PDALRF-IMDR--------DQPFLAVIFCRTKVRASKLYDNLKGLGYNCAELHGD 277
Query: 665 KPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGR 724
PQ R+R+ + FR +K L+ +DV+ARG+D VT V IP D E YIHR+GRTGR
Sbjct: 278 IPQAKRERVMKSFREAKIQYLIATDVAARGLDVDGVTHVFNYDIPEDVESYIHRIGRTGR 337
Query: 725 EGKEGEGVLLLAPWEEYFLDDLK 747
G G + +A +E L++++
Sbjct: 338 AGGSGLAITFVAAKDEKHLEEIE 360
>gi|229156050|ref|ZP_04284149.1| ATP-dependent RNA helicase [Bacillus cereus ATCC 4342]
gi|228627371|gb|EEK84099.1| ATP-dependent RNA helicase [Bacillus cereus ATCC 4342]
Length = 454
Score = 218 bits (554), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 138/377 (36%), Positives = 203/377 (53%), Gaps = 21/377 (5%)
Query: 375 ILSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFL 434
+++ K F E GIS L G + T +QE + L GKD + +AKTGTGK++AF+
Sbjct: 1 MVNVKNFLELGISETFNHTLRENGITEATPIQEQAIPVILSGKDIIGQAKTGTGKTLAFV 60
Query: 435 LPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGT 494
LP +E + S + LI+ PTRELA QI E +L + I VL + GG
Sbjct: 61 LPILEKIDPECSD--------VQALIVAPTRELALQITTEIKKMLVQREDINVLAIYGGQ 112
Query: 495 RFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKD 554
R+L+ + I+VATPGRLLDHI ++ + L L +VLDEAD +L GF D
Sbjct: 113 DVAQQLRKLQGN-THIVVATPGRLLDHIRRET---IDLSNLSTIVLDEADQMLYFGFLYD 168
Query: 555 VENIVDCLPRRRQSLLFSATMPKELVLKREHTYID---TVGLGSVETPVK-IKQSCLVAP 610
+E+I+D P +Q++LFSATMPK+ + K Y+D V + S E V I+Q +
Sbjct: 169 IEDILDETPGSKQTMLFSATMPKD-IKKLAKRYMDEPQMVQVQSEEVTVNTIEQRVIETT 227
Query: 611 HELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYR 670
L ++ + ++FC T + S LY L+ + N E++ PQ R
Sbjct: 228 DRAKPDALRFVMDRD----QPFLAVIFCRTKVRASKLYDNLKGLGYNCAELHGDIPQAKR 283
Query: 671 DRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGE 730
+R+ + FR +K L+ +DV+ARG+D VT V IP D E YIHR+GRTGR G G
Sbjct: 284 ERVMKSFREAKIQYLIATDVAARGLDVDGVTHVFNFDIPEDVESYIHRIGRTGRAGGSGI 343
Query: 731 GVLLLAPWEEYFLDDLK 747
+ +A +E L++++
Sbjct: 344 AITFVAAKDEKHLEEIE 360
>gi|302678493|ref|XP_003028929.1| hypothetical protein SCHCODRAFT_85863 [Schizophyllum commune H4-8]
gi|300102618|gb|EFI94026.1| hypothetical protein SCHCODRAFT_85863 [Schizophyllum commune H4-8]
Length = 747
Score = 218 bits (554), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 155/439 (35%), Positives = 229/439 (52%), Gaps = 63/439 (14%)
Query: 386 ISPLTIKALTAAGYIQMTRVQEATLS--------------ACLEGKDAVVKAKTGTGKSI 431
+S T+K L G +++ VQEA S + +D +VKA+TGTGK++
Sbjct: 97 VSEETLKGLRDMGITRLSPVQEAVFSHLPALAVPISQRPEGSKDTRDLLVKARTGTGKTL 156
Query: 432 AFLLPAIE------------AVLKATSSSTTQLVPP---------IYVLILCPTRELASQ 470
FL+PAIE A+ +AT+ S T+L + LI+ PTRELA+Q
Sbjct: 157 GFLVPAIEMRKRSIEAAGAAALKEATNESDTRLRRQAERSFARGNVGTLIISPTRELATQ 216
Query: 471 IAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSV 530
IAAEAI K H G+ V GG ++ R I+VATPGRL D + + +
Sbjct: 217 IAAEAIKATKYH-GMEVRLFTGGANKRMQMRDFLRGRRDIVVATPGRLRDLLTTEPDMKA 275
Query: 531 RLMGLKMLVLDEADHLLDLGFRKDVENIVDCLP--RRRQSLLFSATMPKEL------VLK 582
+ +LVLDE D +L++GFR D++ I + LP RQ+LL+SAT+P+ + +
Sbjct: 276 AFAKMDLLVLDETDTVLEIGFRDDLDAISEYLPTAEHRQTLLYSATVPRNVQQVARNFMH 335
Query: 583 REHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILH--HLLKEHILGTPDY-KVIVFCS 639
++H ID + + + Q + P QI H L+ + P + KV+VF
Sbjct: 336 KQHEVIDCIKDDAPPVHAHVPQYFTLLPSARD-QIPHLLRLIAHDQMTNPGHSKVVVFFP 394
Query: 640 TGMVTSLLYLLLREMK---------MNVREMYSRKPQLYRDRISEEFRA--SKRLILVTS 688
T +T L +LR + V E++S+ Q RD+ S+ FR+ S ++VTS
Sbjct: 395 TLKLTQLFATILRSLASKTTPAGRATRVHELHSKMTQAGRDKASQAFRSDTSGAAVMVTS 454
Query: 689 DVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEG---EGVLLLAPWEEYFLD- 744
DVSARG+DYP+V+ V+QV IP +EQYIHR+GRTGR G +G G L+L WE F
Sbjct: 455 DVSARGVDYPNVSRVIQVSIPSSKEQYIHRVGRTGRAGSKGVNPRGDLVLHEWEGAFATW 514
Query: 745 DLKDLPLDKLQLPHLNPEI 763
+L D+P+ + L E+
Sbjct: 515 ELADIPIKPTSVDALKDEV 533
>gi|242803584|ref|XP_002484204.1| DEAD box RNA helicase (Hca4), putative [Talaromyces stipitatus
ATCC 10500]
gi|218717549|gb|EED16970.1| DEAD box RNA helicase (Hca4), putative [Talaromyces stipitatus ATCC
10500]
Length = 817
Score = 218 bits (554), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 152/466 (32%), Positives = 249/466 (53%), Gaps = 33/466 (7%)
Query: 371 EEEPILSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKS 430
E +P + + F E +S T LTA+ + +T +Q ++ L+G+D + AKTG+GK+
Sbjct: 41 ELDPKIRLESFSELPLSDPTSSGLTASHFKSLTDIQSRSIPYALKGRDILGAAKTGSGKT 100
Query: 431 IAFLLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTL 490
+AFL+P +E + + + L ++L PTRELA QI E + + + +
Sbjct: 101 LAFLVPVLENLYRKKWTEYDGL----GAIVLSPTRELAIQIF-EVLRKVGRYHTFSAGLV 155
Query: 491 VGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLG 550
+GG K +Q RL ILV TPGR+L H++ + L V L+MLVLDEAD ++D+G
Sbjct: 156 IGGKSLKEEQERLGR--MNILVCTPGRMLQHLDQTAELDV--YNLQMLVLDEADRIMDMG 211
Query: 551 FRKDVENIVDCLPRRRQSLLFSATMPKEL-----VLKREHTYIDTVGLGSVETPVKIKQS 605
F++ V+ I++ LP+ RQ++LFSAT K++ + ++ Y+ + TP ++Q
Sbjct: 212 FQQTVDAIIEHLPKTRQTMLFSATQTKKVSDLARLSLQDPEYVAVHETAASATPSTLQQH 271
Query: 606 CLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK--MNVREMYS 663
++ P L+ ++ ++ K IVF S+G +Y LR ++ + + ++
Sbjct: 272 YIITPLPEKLDTLYSFIRSNLKS----KTIVFMSSGKQVRFVYESLRHLQPGIPLLHLHG 327
Query: 664 RKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTG 723
R+ Q R I+ F SK +L ++DV+ARG+D+P V V+Q+ P D + YIHR+GRT
Sbjct: 328 RQKQGGRLDITTRFAQSKHAVLFSTDVAARGLDFPAVDWVIQLDCPEDADTYIHRVGRTA 387
Query: 724 REGKEGEGVLLLAPWEEYFLDDLKDLPLDKLQLPHLN------PEIQLQMDNHMAKIDNN 777
R + G VL L P EE + LK L K+ + +N I+ Q+ N M D
Sbjct: 388 RYERNGRAVLFLDPSEEEGM--LKRLEQKKVPIERINVKAKKQQSIKDQLQN-MCFKDPE 444
Query: 778 VKEAAYHAWLGYYNSIREIGRDKTT--LVELA-NKFAQSIGLQRPP 820
+K A++ Y SI + +DK + +LA + FA S+GL P
Sbjct: 445 LKYLGQKAFISYVKSIH-VQKDKEVFKVKDLALDAFASSLGLPGAP 489
>gi|392576363|gb|EIW69494.1| hypothetical protein TREMEDRAFT_71647 [Tremella mesenterica DSM
1558]
Length = 562
Score = 218 bits (554), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 155/455 (34%), Positives = 241/455 (52%), Gaps = 31/455 (6%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F ++P T A+ G+ MT VQ T+ L GKD + A+TG+GK++AFL+P++E
Sbjct: 85 FSSLSLTPATTSAIERMGFTTMTEVQARTIPPLLAGKDVLGAARTGSGKTMAFLVPSVEL 144
Query: 441 VLKATSSSTTQLVPP--IYVLILCPTRELASQIAAEAIALLKNHD-GIGVLTLVGGTRFK 497
+ ST + P V+I+ PTRELA QI A L+++H GVL +GG K
Sbjct: 145 L------STLRFKPVNGTGVIIISPTRELALQIFGVAKELMQDHSQTFGVL--MGGANRK 196
Query: 498 VDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVEN 557
+ +L+ ++VATPGRLLDH++N G + LK LV+DEAD +L++GF ++++
Sbjct: 197 TEADKLQKG-VNLIVATPGRLLDHLQNTKGFIFK--NLKALVIDEADRILEIGFEEEMKQ 253
Query: 558 IVDCLPRR-RQSLLFSATMPKELV------LKREHTYIDTVGLGSVETPVKIKQSCLVAP 610
I+ LP RQS+LFSAT ++ L+ YI+ S T ++Q +V
Sbjct: 254 IIKILPNENRQSMLFSATQTTKVTDLARISLRPGPLYINVDSSKSASTVDMLEQGYVVCE 313
Query: 611 HELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYR 670
+ F +L L+ ++ K+IVF S+ + LL + + V +++ ++ Q R
Sbjct: 314 SDKRFMLLFTFLRRNL----KKKIIVFFSSCNSVNYHAELLNYIDVPVLDLHGKQKQQKR 369
Query: 671 DRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGE 730
EF + IL+ +DV+ARG+D P V ++Q P D YIHR+GRT R GK G+
Sbjct: 370 TNTFFEFCNAPSGILLCTDVAARGLDIPKVDWIIQFDPPDDPRDYIHRVGRTARAGKSGK 429
Query: 731 GVLLLAPWEEYFLDDLK--DLPLDKLQLPHLN-PEIQLQMDNHMAK--IDNNVKEAAYHA 785
+L L P E FL LK +PL++ Q P ++Q Q+++ ++K N Y A
Sbjct: 430 SLLFLLPSELGFLRFLKVAKVPLNEYQFPQKKISDVQKQLESLISKNHYLNQSARDGYRA 489
Query: 786 WLGYYNSIREIGRDKTTLVELANKFAQSIGLQRPP 820
+L Y S ++LA K A++ G PP
Sbjct: 490 YLQSYASYSLKKIFDVNALDLA-KVAKAFGFAVPP 523
>gi|407704916|ref|YP_006828501.1| hypothetical protein MC28_1680 [Bacillus thuringiensis MC28]
gi|407382601|gb|AFU13102.1| ATP-dependent RNA helicase [Bacillus thuringiensis MC28]
Length = 450
Score = 218 bits (554), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 136/383 (35%), Positives = 201/383 (52%), Gaps = 41/383 (10%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
K F E GIS L G + T +QE + + GKD + +AKTGTGK++AF+LP +
Sbjct: 5 KNFLELGISETFNHTLRENGITEATPIQEKAIPVIMSGKDIIGQAKTGTGKTLAFVLPIL 64
Query: 439 EAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
E + +S + LI+ PTRELA QI E +L + I VL + GG
Sbjct: 65 EKIDPESSD--------VQALIVAPTRELALQITTEIKKMLVQREDINVLAIYGGQDVAQ 116
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
R+L+ + I+VATPGRLLDHI ++ + L L +VLDEAD +L GF D+E+I
Sbjct: 117 QLRKLKGN-THIVVATPGRLLDHIRRET---IDLSNLSTIVLDEADQMLYFGFLYDIEDI 172
Query: 559 VDCLPRRRQSLLFSATMPKEL--------------VLKREHTYIDTVGLGSVETPVKIKQ 604
+D P +Q++LFSATMPK++ ++ E +DT+ +ET + K
Sbjct: 173 LDETPGSKQTMLFSATMPKDIKKLAKRYMDEPQMIQVQSEEVTVDTIEQRVIETTDRAK- 231
Query: 605 SCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSR 664
P L F + + ++FC T + S LY L+ + N E++
Sbjct: 232 -----PDALRFVMDRD---------QPFLAVIFCRTKVRASKLYDNLKGLGYNCAELHGD 277
Query: 665 KPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGR 724
PQ R+R+ + FR +K L+ +DV+ARG+D VT V IP D E YIHR+GRTGR
Sbjct: 278 IPQAKRERVMKSFREAKIQYLIATDVAARGLDVDGVTHVFNYDIPEDVESYIHRIGRTGR 337
Query: 725 EGKEGEGVLLLAPWEEYFLDDLK 747
G G + +A +E L++++
Sbjct: 338 AGGSGLAITFVAAKDEKHLEEIE 360
>gi|50551911|ref|XP_503430.1| YALI0E01782p [Yarrowia lipolytica]
gi|74634065|sp|Q6C7D2.1|HAS1_YARLI RecName: Full=ATP-dependent RNA helicase HAS1
gi|49649299|emb|CAG79009.1| YALI0E01782p [Yarrowia lipolytica CLIB122]
Length = 605
Score = 218 bits (554), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 154/463 (33%), Positives = 248/463 (53%), Gaps = 42/463 (9%)
Query: 378 QKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPA 437
+K F +S T+++L G+ MT VQE T+ L G+D + AKTG+GK++AFL+PA
Sbjct: 130 RKPFSTIPLSENTMQSLKDMGFETMTPVQEKTIPPLLAGRDVLGAAKTGSGKTLAFLIPA 189
Query: 438 IEAV--LKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHD-GIGVLTLVGGT 494
IE + LK + T V+++ PTRELA QI A L+ NH +G++ +GG
Sbjct: 190 IEMLRKLKFKPRNGTG------VIVVSPTRELALQIYGVARDLMANHSQTLGIV--IGGN 241
Query: 495 RFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKD 554
+ ++ +L +LV TPGRLLDH++N G + LK L++DEAD +L++GF ++
Sbjct: 242 NRRQEEEKLNKG-VNLLVCTPGRLLDHLQNSQGFVFK--NLKALIIDEADRILEIGFEQE 298
Query: 555 VENIVDCLPRRRQSLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSCLV 608
++ I+ LP+ RQS+LFSAT + + LK+ Y++ T ++Q +V
Sbjct: 299 MKEIIKILPKERQSMLFSATQTTKVEDLARISLKKGPLYLNVDEHNVSSTAEGLEQGYVV 358
Query: 609 APHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQL 668
+ F +L LK + K+IVF S+ LL + + V +++ ++ Q
Sbjct: 359 CDSDKRFLLLFSFLKRN----AGKKIIVFLSSCNSVKFYGELLNYIDLPVLDLHGKQKQQ 414
Query: 669 YRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKE 728
R EF +K+ +L+ +DV+ARG+D P V ++Q P D YIHR+GRT R
Sbjct: 415 KRTNTFFEFINAKQGVLICTDVAARGLDIPKVDWIIQFDPPDDPRDYIHRVGRTARGSAS 474
Query: 729 GEGVLLLAPWEEYFLDDLK--DLPLDKLQLPHLN-PEIQLQMDNHMAK---IDNNVKEAA 782
G+ ++ L P E FL LK +PL++ + P+ +Q Q++ ++ ++ + K+
Sbjct: 475 GKSIMFLTPSELGFLRYLKAAKVPLNEYEFPNKKIANVQSQLEKLISSNYWLNTSAKD-G 533
Query: 783 YHAWLGYYNS-----IREIGRDKTTLVELANKFAQSIGLQRPP 820
Y A+L Y S + +I DK LV K A+S G PP
Sbjct: 534 YRAYLQAYASHHLKTVYQI--DKLDLV----KVAKSFGFNVPP 570
>gi|229173149|ref|ZP_04300699.1| ATP-dependent RNA helicase [Bacillus cereus MM3]
gi|228610326|gb|EEK67598.1| ATP-dependent RNA helicase [Bacillus cereus MM3]
Length = 446
Score = 218 bits (554), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 136/383 (35%), Positives = 201/383 (52%), Gaps = 41/383 (10%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
K F E GIS L G + T +QE + + GKD + +AKTGTGK++AF+LP +
Sbjct: 5 KNFLELGISETFNHTLRENGITEATPIQEKAIPVIMSGKDIIGQAKTGTGKTLAFVLPIL 64
Query: 439 EAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
E + +S + LI+ PTRELA QI E +L + I VL + GG
Sbjct: 65 EKIDPKSSD--------VQALIVAPTRELALQITTEIKKMLVQREDINVLAIYGGQDVAQ 116
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
R+L+ + I+VATPGRLLDHI ++ + L L +VLDEAD +L GF D+E+I
Sbjct: 117 QLRKLKGN-THIVVATPGRLLDHIRRET---IDLSNLSTIVLDEADQMLYFGFLYDIEDI 172
Query: 559 VDCLPRRRQSLLFSATMPKEL--------------VLKREHTYIDTVGLGSVETPVKIKQ 604
+D P +Q++LFSATMPK++ ++ E +DT+ +ET + K
Sbjct: 173 LDETPGSKQTMLFSATMPKDIKKLAKRYMDEPQMIQVQSEEVTVDTIEQRVIETTDRAK- 231
Query: 605 SCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSR 664
P L F + + ++FC T + S LY L+ + N E++
Sbjct: 232 -----PDALRFVMDRD---------QPFLAVIFCRTKVRASKLYDNLKGLGYNCAELHGD 277
Query: 665 KPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGR 724
PQ R+R+ + FR +K L+ +DV+ARG+D VT V IP D E YIHR+GRTGR
Sbjct: 278 IPQAKRERVMKSFREAKIQYLIATDVAARGLDVDGVTHVFNFDIPEDVESYIHRIGRTGR 337
Query: 725 EGKEGEGVLLLAPWEEYFLDDLK 747
G G + +A +E L++++
Sbjct: 338 AGGSGLAITFVAAKDEKHLEEIE 360
>gi|383858854|ref|XP_003704914.1| PREDICTED: probable ATP-dependent RNA helicase DDX10 [Megachile
rotundata]
Length = 786
Score = 218 bits (554), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 146/455 (32%), Positives = 248/455 (54%), Gaps = 28/455 (6%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
K+F + +S T K L Y+ MT +Q ++ L G D + AKTG+GK++AFL+P +
Sbjct: 39 KKFTDLPLSKKTQKGLAENNYVDMTDIQRQSIGLALRGNDILGAAKTGSGKTLAFLIPVL 98
Query: 439 EAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
E + T+L + LI+ PTRELA QI + + HD L ++GG K
Sbjct: 99 EILY---CKQWTRL-DGLGALIITPTRELAYQIYETLRKIGQFHDFSAGL-IIGGKDLKF 153
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
+++R+ D C I++ TPGRLL H++ + +++LVLDEAD LD+GF++ + +I
Sbjct: 154 EKKRV--DQCNIIICTPGRLLQHMDENPLFDC--VNMQVLVLDEADRCLDMGFQQTMNSI 209
Query: 559 VDCLPRRRQSLLFSATMPKEL-----VLKREHTYIDTVGLGSVETPVKIKQSCLVAPHEL 613
++ LP +RQ+LLFSAT + + + ++ Y+ + TP ++QS ++ P E
Sbjct: 210 IENLPSKRQTLLFSATQTRSVKDLARLSLKDPMYVSVHEHATHTTPEALQQSYIICPLED 269
Query: 614 HFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK--MNVREMYSRKPQLYRD 671
+L ++ H+ K+IVF S+ +Y + ++ +++ +Y QL R
Sbjct: 270 KLSMLWSFIRNHL----KQKIIVFFSSCKQVKYMYEVFCRLRPGVSLLALYGTLHQLRRM 325
Query: 672 RISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEG 731
I E F + +L +D++ARG+D+P V VVQ+ P D YIHR GRT R GE
Sbjct: 326 EIYETFCKKQFAVLFATDIAARGLDFPAVNWVVQMDCPEDVNAYIHRAGRTARFQSGGES 385
Query: 732 VLLLAPWEEYFLDDLKD--LPLDKLQL-PHLNPEIQLQMDNHMAKIDNNVKEAAYHAWLG 788
+L+L E ++ LK+ +P+ +++ P+ Q +++ +A+ D ++KE+A A++
Sbjct: 386 LLVLLSSEIKMVEKLKERKIPISMIKINPNKLQSPQRKIEALLAR-DVSLKESAQRAFIA 444
Query: 789 YYNSIREIGRDKTTLVELA---NKFAQSIGLQRPP 820
Y S+ + +DK A + FA+S+GL PP
Sbjct: 445 YVKSVF-LMKDKEIFNVRALNTDSFARSLGLAIPP 478
>gi|256821642|ref|YP_003145605.1| DEAD/DEAH box helicase [Kangiella koreensis DSM 16069]
gi|256795181|gb|ACV25837.1| DEAD/DEAH box helicase domain protein [Kangiella koreensis DSM
16069]
Length = 598
Score = 218 bits (554), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 137/391 (35%), Positives = 213/391 (54%), Gaps = 32/391 (8%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
FDE G+SP +K++ GY Q + +Q A++ + GKD + +A+TGTGK+ AF LP +
Sbjct: 10 FDELGLSPAVLKSIKQVGYEQPSPIQSASIPVLMAGKDIIGQAQTGTGKTAAFALPMLSR 69
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+ + TQL L+L PTRELA Q+A + KN G+ VL + GG ++ +
Sbjct: 70 L--DAKDNNTQL------LVLAPTRELAIQVAEACQSYAKNMPGLNVLPIYGGQKYDIQL 121
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
R+L+ QI+V TPGR++DHI + ++L LK LVLDEAD +L +GF DVE ++
Sbjct: 122 RQLKRG-AQIVVGTPGRVMDHIRRGT---LKLDNLKALVLDEADEMLRMGFIDDVEWVLG 177
Query: 561 CLPRRRQSLLFSATMPKEL-------VLKREHTYIDTVGLGSVETPVKIKQSCLVAPHEL 613
P+ RQ LFSATMPKE+ + + EH I T S T + + + H+L
Sbjct: 178 HTPKTRQIALFSATMPKEIKKVAEKYLHEPEHIKIQTKT--STATTINQRYWLVSGIHKL 235
Query: 614 HFQILHHLLKEHILGTPDYK-VIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDR 672
+L T ++ +I+F T + T+ L L + Q R+R
Sbjct: 236 DALT-------RVLETEEFDGMIIFVRTKIATTELADKLTARGFRAEALNGDIAQTTRER 288
Query: 673 ISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGV 732
I E+ + + IL+ +DV+ARG+D ++ VV IP D E Y+HR+GRTGR G+ G +
Sbjct: 289 IVEKLKKGQIDILIATDVAARGLDVERISHVVNYDIPYDTESYVHRIGRTGRAGRSGNAI 348
Query: 733 LLLAPWEEYFLDDLK---DLPLDKLQLPHLN 760
L +A E L ++ + P+ ++Q+P ++
Sbjct: 349 LFVAHRERRMLKAIERATNQPITEMQMPSID 379
>gi|423529710|ref|ZP_17506155.1| hypothetical protein IGE_03262 [Bacillus cereus HuB1-1]
gi|402448192|gb|EJV80040.1| hypothetical protein IGE_03262 [Bacillus cereus HuB1-1]
Length = 454
Score = 218 bits (554), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 136/383 (35%), Positives = 201/383 (52%), Gaps = 41/383 (10%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
K F E GIS L G + T +QE + + GKD + +AKTGTGK++AF+LP +
Sbjct: 5 KNFLELGISETFNHTLRENGITEATPIQEKAIPVIMSGKDIIGQAKTGTGKTLAFVLPIL 64
Query: 439 EAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
E + +S + LI+ PTRELA QI E +L + I VL + GG
Sbjct: 65 EKIDPESSD--------VQALIVAPTRELALQITTEIKKMLVQREDINVLAIYGGQDVAQ 116
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
R+L+ + I+VATPGRLLDHI ++ + L L +VLDEAD +L GF D+E+I
Sbjct: 117 QLRKLKGN-THIVVATPGRLLDHIRRET---IDLSNLSTIVLDEADQMLYFGFLYDIEDI 172
Query: 559 VDCLPRRRQSLLFSATMPKEL--------------VLKREHTYIDTVGLGSVETPVKIKQ 604
+D P +Q++LFSATMPK++ ++ E +DT+ +ET + K
Sbjct: 173 LDETPGSKQTMLFSATMPKDIKKLAKRYMDEPQMIQVQSEEVTVDTIEQRVIETTDRAK- 231
Query: 605 SCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSR 664
P L F + + ++FC T + S LY L+ + N E++
Sbjct: 232 -----PDALRFVMDRD---------QPFLAVIFCRTKVRASKLYDNLKGLGYNCAELHGD 277
Query: 665 KPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGR 724
PQ R+R+ + FR +K L+ +DV+ARG+D VT V IP D E YIHR+GRTGR
Sbjct: 278 IPQAKRERVMKSFREAKIQYLIATDVAARGLDVDGVTHVFNFDIPEDVESYIHRIGRTGR 337
Query: 725 EGKEGEGVLLLAPWEEYFLDDLK 747
G G + +A +E L++++
Sbjct: 338 AGGSGLAITFVAAKDEKHLEEIE 360
>gi|423413828|ref|ZP_17390948.1| hypothetical protein IE1_03132 [Bacillus cereus BAG3O-2]
gi|423430388|ref|ZP_17407392.1| hypothetical protein IE7_02204 [Bacillus cereus BAG4O-1]
gi|401099746|gb|EJQ07747.1| hypothetical protein IE1_03132 [Bacillus cereus BAG3O-2]
gi|401119315|gb|EJQ27130.1| hypothetical protein IE7_02204 [Bacillus cereus BAG4O-1]
Length = 454
Score = 218 bits (554), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 137/383 (35%), Positives = 202/383 (52%), Gaps = 41/383 (10%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
K F E GIS L G + T +QE + + GKD + +AKTGTGK++AF+LP +
Sbjct: 5 KNFLELGISETFNHTLRENGITEATPIQEKAIPVIMSGKDIIGQAKTGTGKTLAFVLPIL 64
Query: 439 EAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
E + +S + LI+ PTRELA QI E +L + I VL + GG
Sbjct: 65 EKIDPESSD--------VQALIVAPTRELALQITTEIKKMLVQREDINVLAIYGGQDVAQ 116
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
R+L+ + I+VATPGRLLDHI ++ + L L +VLDEAD +L GF D+E+I
Sbjct: 117 QLRKLKGN-THIVVATPGRLLDHIRRET---IDLSNLSTIVLDEADQMLYFGFLYDIEDI 172
Query: 559 VDCLPRRRQSLLFSATMPKEL--------------VLKREHTYIDTVGLGSVETPVKIKQ 604
+D P +Q++LFSATMPK++ ++ E +DT+ +ET + K
Sbjct: 173 LDETPDSKQTMLFSATMPKDIKKLAKRYMDEPQMIQVQSEEVTVDTIEQRVIETTDRAK- 231
Query: 605 SCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSR 664
P L F I+ + ++FC T + S LY L+ + N E++
Sbjct: 232 -----PDALRF-IMDR--------DQPFLAVIFCRTKVRASKLYDNLKGLGYNCAELHGD 277
Query: 665 KPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGR 724
PQ R+R+ + FR +K L+ +DV+ARG+D VT V IP D E YIHR+GRTGR
Sbjct: 278 IPQAKRERVMKSFREAKIQYLIATDVAARGLDVDGVTHVFNFDIPEDVESYIHRIGRTGR 337
Query: 725 EGKEGEGVLLLAPWEEYFLDDLK 747
G G + +A +E L++++
Sbjct: 338 AGGSGLAITFVAAKDEKHLEEIE 360
>gi|229079638|ref|ZP_04212172.1| ATP-dependent RNA helicase [Bacillus cereus Rock4-2]
gi|228703680|gb|EEL56132.1| ATP-dependent RNA helicase [Bacillus cereus Rock4-2]
Length = 454
Score = 218 bits (554), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 136/383 (35%), Positives = 201/383 (52%), Gaps = 41/383 (10%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
K F E GIS L G + T +QE + + GKD + +AKTGTGK++AF+LP +
Sbjct: 5 KNFLELGISETFNHTLRENGITEATPIQEKAIPVIMSGKDIIGQAKTGTGKTLAFVLPIL 64
Query: 439 EAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
E + +S + LI+ PTRELA QI E +L + I VL + GG
Sbjct: 65 EKIDPESSD--------VQALIVAPTRELALQITTEIKKMLVQREDINVLAIYGGQDVAQ 116
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
R+L+ + I+VATPGRLLDHI ++ + L L +VLDEAD +L GF D+E+I
Sbjct: 117 QLRKLKGN-THIVVATPGRLLDHIRRET---IDLSNLSTIVLDEADQMLYFGFLYDIEDI 172
Query: 559 VDCLPRRRQSLLFSATMPKEL--------------VLKREHTYIDTVGLGSVETPVKIKQ 604
+D P +Q++LFSATMPK++ ++ E +DT+ +ET + K
Sbjct: 173 LDETPGSKQTMLFSATMPKDIKKLAKRYMDEPQMIQVQSEEVTVDTIEQRVIETTDRAK- 231
Query: 605 SCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSR 664
P L F + + ++FC T + S LY L+ + N E++
Sbjct: 232 -----PDALRFVMDRD---------QPFLAVIFCRTKVRASKLYDNLKGLGYNCAELHGD 277
Query: 665 KPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGR 724
PQ R+R+ + FR +K L+ +DV+ARG+D VT V IP D E YIHR+GRTGR
Sbjct: 278 IPQAKRERVMKSFREAKIQYLIATDVAARGLDVDGVTHVFNFDIPEDVESYIHRIGRTGR 337
Query: 725 EGKEGEGVLLLAPWEEYFLDDLK 747
G G + +A +E L++++
Sbjct: 338 AGGSGLAITFVAAKDEKHLEEIE 360
>gi|229178806|ref|ZP_04306167.1| ATP-dependent RNA helicase [Bacillus cereus 172560W]
gi|228604682|gb|EEK62142.1| ATP-dependent RNA helicase [Bacillus cereus 172560W]
Length = 458
Score = 218 bits (554), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 137/383 (35%), Positives = 202/383 (52%), Gaps = 41/383 (10%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
K F E GIS L G + T +QE + + GKD + +AKTGTGK++AF+LP +
Sbjct: 5 KNFLELGISETFNHTLRENGITEATPIQEKAIPVIMSGKDIIGQAKTGTGKTLAFVLPIL 64
Query: 439 EAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
E + +S + LI+ PTRELA QI E +L + I VL + GG
Sbjct: 65 EKIDPESSD--------VQALIVAPTRELALQITTEIKKMLVQREDINVLAIYGGQDVAQ 116
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
R+L+ + I+VATPGRLLDHI ++ + L L +VLDEAD +L GF D+E+I
Sbjct: 117 QLRKLKGN-THIVVATPGRLLDHIRRET---IDLSNLSTIVLDEADQMLYFGFLYDIEDI 172
Query: 559 VDCLPRRRQSLLFSATMPKEL--------------VLKREHTYIDTVGLGSVETPVKIKQ 604
+D P +Q++LFSATMPK++ ++ E +DT+ +ET + K
Sbjct: 173 LDETPDSKQTMLFSATMPKDIKKLAKRYMDEPQMIQVQSEEVTVDTIEQRVIETTDRAK- 231
Query: 605 SCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSR 664
P L F I+ + ++FC T + S LY L+ + N E++
Sbjct: 232 -----PDALRF-IMDR--------DQPFLAVIFCRTKVRASKLYDNLKGLGYNCAELHGD 277
Query: 665 KPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGR 724
PQ R+R+ + FR +K L+ +DV+ARG+D VT V IP D E YIHR+GRTGR
Sbjct: 278 IPQAKRERVMKSFREAKIQYLIATDVAARGLDVDGVTHVFNFDIPEDVESYIHRIGRTGR 337
Query: 725 EGKEGEGVLLLAPWEEYFLDDLK 747
G G + +A +E L++++
Sbjct: 338 AGGSGLAITFVAAKDEKHLEEIE 360
>gi|229190613|ref|ZP_04317610.1| ATP-dependent RNA helicase [Bacillus cereus ATCC 10876]
gi|228592958|gb|EEK50780.1| ATP-dependent RNA helicase [Bacillus cereus ATCC 10876]
Length = 458
Score = 218 bits (554), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 137/383 (35%), Positives = 202/383 (52%), Gaps = 41/383 (10%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
K F E GIS L G + T +QE + + GKD + +AKTGTGK++AF+LP +
Sbjct: 5 KNFLELGISETFNHTLRENGITEATPIQEKAIPVIMSGKDIIGQAKTGTGKTLAFVLPIL 64
Query: 439 EAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
E + +S + LI+ PTRELA QI E +L + I VL + GG
Sbjct: 65 EKIDPESSD--------VQALIVAPTRELALQITTEIKKMLVQREDINVLAIYGGQDVAQ 116
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
R+L+ + I+VATPGRLLDHI ++ + L L +VLDEAD +L GF D+E+I
Sbjct: 117 QLRKLKGN-THIVVATPGRLLDHIRRET---IDLSNLSTIVLDEADQMLYFGFLYDIEDI 172
Query: 559 VDCLPRRRQSLLFSATMPKEL--------------VLKREHTYIDTVGLGSVETPVKIKQ 604
+D P +Q++LFSATMPK++ ++ E +DT+ +ET + K
Sbjct: 173 LDETPDSKQTMLFSATMPKDIKKLAKRYMDEPQMIQVQSEEVTVDTIEQRVIETTDRAK- 231
Query: 605 SCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSR 664
P L F I+ + ++FC T + S LY L+ + N E++
Sbjct: 232 -----PDALRF-IMDR--------DQPFLAVIFCRTKVRASKLYDNLKGLGYNCAELHGD 277
Query: 665 KPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGR 724
PQ R+R+ + FR +K L+ +DV+ARG+D VT V IP D E YIHR+GRTGR
Sbjct: 278 IPQAKRERVMKSFREAKIQYLIATDVAARGLDVDGVTHVFNFDIPEDVESYIHRIGRTGR 337
Query: 725 EGKEGEGVLLLAPWEEYFLDDLK 747
G G + +A +E L++++
Sbjct: 338 AGGSGLAITFVAAKDEKHLEEIE 360
>gi|30262474|ref|NP_844851.1| DEAD/DEAH box helicase [Bacillus anthracis str. Ames]
gi|47527766|ref|YP_019115.1| DEAD/DEAH box helicase [Bacillus anthracis str. 'Ames Ancestor']
gi|49185310|ref|YP_028562.1| DEAD/DEAH box helicase [Bacillus anthracis str. Sterne]
gi|167632590|ref|ZP_02390917.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Bacillus
anthracis str. A0442]
gi|170687052|ref|ZP_02878271.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Bacillus
anthracis str. A0465]
gi|227814717|ref|YP_002814726.1| ATP-dependent RNA helicase [Bacillus anthracis str. CDC 684]
gi|386736224|ref|YP_006209405.1| ATP-dependent RNA helicase [Bacillus anthracis str. H9401]
gi|421636278|ref|ZP_16076877.1| ATP-dependent RNA helicase [Bacillus anthracis str. BF1]
gi|30257105|gb|AAP26337.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Bacillus
anthracis str. Ames]
gi|47502914|gb|AAT31590.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Bacillus
anthracis str. 'Ames Ancestor']
gi|49179237|gb|AAT54613.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Bacillus
anthracis str. Sterne]
gi|167532888|gb|EDR95524.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Bacillus
anthracis str. A0442]
gi|170669103|gb|EDT19847.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Bacillus
anthracis str. A0465]
gi|227002434|gb|ACP12177.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Bacillus
anthracis str. CDC 684]
gi|384386076|gb|AFH83737.1| ATP-dependent RNA helicase [Bacillus anthracis str. H9401]
gi|403396806|gb|EJY94043.1| ATP-dependent RNA helicase [Bacillus anthracis str. BF1]
Length = 450
Score = 217 bits (553), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 136/383 (35%), Positives = 201/383 (52%), Gaps = 41/383 (10%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
K F E GIS L G + T +QE + L GKD + +AKTGTGK++AF+LP +
Sbjct: 5 KNFLELGISETFNHTLRENGITEATPIQEKAIPVILSGKDIIGQAKTGTGKTLAFVLPIL 64
Query: 439 EAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
E + +S + LI+ PTRELA QI E +L + I VL + GG
Sbjct: 65 EKIDPESSD--------VQALIVAPTRELALQITTEIKKMLVQREDINVLAIYGGQDVAQ 116
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
R+L+ + I+VATPGRLLDHI ++ + L L +VLDEAD +L GF D+E+I
Sbjct: 117 QLRKLKGN-THIVVATPGRLLDHIRRET---IDLSNLSTIVLDEADQMLYFGFLYDIEDI 172
Query: 559 VDCLPRRRQSLLFSATMPKEL--------------VLKREHTYIDTVGLGSVETPVKIKQ 604
+D P +Q++LFSAT+PK++ ++ E +DT+ +ET + K
Sbjct: 173 LDETPGSKQTMLFSATIPKDIKKLAKRYMDEPQMIQVQSEEVTVDTIEQRVIETTDRAK- 231
Query: 605 SCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSR 664
P L F + + ++FC T + S LY L+ + N E++
Sbjct: 232 -----PDALRFVMDRD---------QPFLAVIFCRTKVRASKLYDNLKGLGYNCAELHGD 277
Query: 665 KPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGR 724
PQ R+R+ + FR +K L+ +DV+ARG+D VT V IP D E YIHR+GRTGR
Sbjct: 278 IPQAKRERVMKSFREAKIQYLIATDVAARGLDVDGVTHVFNYDIPEDVESYIHRIGRTGR 337
Query: 725 EGKEGEGVLLLAPWEEYFLDDLK 747
G G + +A +E L++++
Sbjct: 338 AGGSGLAITFVAAKDEKHLEEIE 360
>gi|383857595|ref|XP_003704290.1| PREDICTED: probable ATP-dependent RNA helicase pitchoune-like
[Megachile rotundata]
Length = 621
Score = 217 bits (553), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 156/450 (34%), Positives = 253/450 (56%), Gaps = 35/450 (7%)
Query: 390 TIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSST 449
T+KA+ G+ MT +Q ++ LEG+D V AKTG+GK++AFL+PA+E + K
Sbjct: 137 TLKAIEDMGFKNMTEIQAKSIPPLLEGRDLVGAAKTGSGKTLAFLIPAVELIYKL----- 191
Query: 450 TQLVP--PIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDP 507
+ +P +I+ PTREL+ Q L+K H L L+GG + + ++L S
Sbjct: 192 -KFMPRNGTGCIIISPTRELSMQTFGVLKELMKYHHHTYGL-LMGGASRQTEAQKL-SKG 248
Query: 508 CQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQ 567
I+VATPGRLLDH++N + + L+ LV+DEAD +LD+GF ++++ I+ LP++RQ
Sbjct: 249 INIVVATPGRLLDHLQNTADFLYK--NLQCLVIDEADRILDIGFEEELKQIIHILPKKRQ 306
Query: 568 SLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILHHL 621
++LFSAT K+ L LK+E Y+ T ++Q +V P E F +L
Sbjct: 307 TMLFSATQTKKTETLTALALKKEPIYVGVDDHHEKATVEGLEQGYVVCPSEKRFLLLFTF 366
Query: 622 LKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEFRASK 681
LK++ KV+VF S+ M + LL + + V ++ ++ Q R +F +
Sbjct: 367 LKKN----RKKKVMVFFSSCMSVKYHHELLNYIDLPVLSIHGKQKQTKRTTTFFQFCNAS 422
Query: 682 RLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGR-EGKEGEGVLLLAPWEE 740
IL+ +DV+ARG+D P V +VQ P D ++YIHR+GRT R EG G +L+L P E
Sbjct: 423 SGILLCTDVAARGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHALLILRPEEL 482
Query: 741 YFLDDLKD--LPLDKLQLP-HLNPEIQLQMDNHMAK---IDNNVKEAAYHAWLGYYNS-- 792
FL LK +P+++ + +IQLQ++ ++K ++ + KE A+ A++ Y+S
Sbjct: 483 GFLRYLKQARVPVNEFDFSWNKIADIQLQLEKLISKNYFLNVSAKE-AFKAYVRAYDSHH 541
Query: 793 IREIGRDKTTLVELANKFAQSIGLQRPPPL 822
+++I +T ++L K A+S G PP +
Sbjct: 542 LKQIFDIET--LDLV-KVAKSFGFLVPPAV 568
>gi|301053986|ref|YP_003792197.1| ATP-dependent RNA helicase [Bacillus cereus biovar anthracis str.
CI]
gi|300376155|gb|ADK05059.1| ATP-dependent RNA helicase [Bacillus cereus biovar anthracis str.
CI]
Length = 454
Score = 217 bits (553), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 136/372 (36%), Positives = 200/372 (53%), Gaps = 19/372 (5%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
K F E GIS L G + T +QE + L GKD + +AKTGTGK++AF+LP +
Sbjct: 5 KNFLELGISETFNHTLRENGITEATPIQEKAIPVILSGKDIIGQAKTGTGKTLAFVLPIL 64
Query: 439 EAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
E + +S + LI+ PTRELA QI E +L + I VL + GG
Sbjct: 65 EKIDPESSD--------VQALIVAPTRELALQITTEIKKMLVQREDINVLAIYGGQDVAQ 116
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
R+L+ + I+VATPGRLLDHI ++ + L L +VLDEAD +L GF D+E+I
Sbjct: 117 QLRKLKGN-THIVVATPGRLLDHIRRET---IDLSNLSTIVLDEADQMLYFGFLYDIEDI 172
Query: 559 VDCLPRRRQSLLFSATMPKEL--VLKREHTYIDTVGLGSVETPVK-IKQSCLVAPHELHF 615
+D P +Q++LFSATMPK++ + KR + + S E V I+Q +
Sbjct: 173 LDETPGSKQTMLFSATMPKDIKKLAKRYMDEPQMIQVQSEEVTVNTIEQRVIETTDRAKP 232
Query: 616 QILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISE 675
L ++ + ++FC T + S LY L+ + N E++ PQ R+R+ +
Sbjct: 233 DALRFVMDRD----QPFLAVIFCRTKVRASKLYDNLKGLGYNCAELHGDIPQAKRERVMK 288
Query: 676 EFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLL 735
FR +K L+ +DV+ARG+D VT V IP D E YIHR+GRTGR G G + +
Sbjct: 289 SFREAKIQYLIATDVAARGLDVDGVTHVFNYDIPEDVESYIHRIGRTGRAGGSGLAITFV 348
Query: 736 APWEEYFLDDLK 747
A +E L++++
Sbjct: 349 AAKDEKHLEEIE 360
>gi|260948130|ref|XP_002618362.1| hypothetical protein CLUG_01821 [Clavispora lusitaniae ATCC 42720]
gi|238848234|gb|EEQ37698.1| hypothetical protein CLUG_01821 [Clavispora lusitaniae ATCC 42720]
Length = 560
Score = 217 bits (553), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 165/467 (35%), Positives = 253/467 (54%), Gaps = 54/467 (11%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F+E G S T+KA+ G+ +MT+VQ T+ L G+D + AKTG+GK++AFLLPAIE
Sbjct: 98 FEEAGFSEPTLKAIRQMGFKKMTKVQAKTIPPLLAGRDVLGAAKTGSGKTLAFLLPAIEL 157
Query: 441 V--LKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNH-DGIGVLTLVGGTRFK 497
+ LK + T V+I+ PTRELA QI A L+++H G+ ++GG
Sbjct: 158 LYSLKFKPRNGTG------VVIISPTRELALQIFGVARELMEHHTQTFGI--VIGGA--- 206
Query: 498 VDQRRLESDP----CQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRK 553
RR E+D +L+ATPGRLLDH++N G + LK LV+DEAD +L++GF +
Sbjct: 207 --NRRQEADKLVKGVNLLIATPGRLLDHLQNTQGFVFK--NLKALVIDEADRILEIGFEE 262
Query: 554 DVENIVDCLPRR-RQSLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSC 606
+++ I+ LP RQS+LFSAT + + L+ YI+ V + T ++Q
Sbjct: 263 EMKQIIKILPNEDRQSMLFSATQTTKVEDLARMSLRPGPLYINVVPESAASTADGLEQGY 322
Query: 607 LVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKP 666
+V + F +L LK + K+IVF S+ LL + + V +++ ++
Sbjct: 323 VVCESDKRFLLLFSFLKRN----AKKKIIVFLSSCNCVKYFGELLNYIDLPVLDLHGKQK 378
Query: 667 QLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREG 726
Q R EF +K+ IL+ +DV+ARG+D P V +VQ P D YIHR+GRT R G
Sbjct: 379 QAKRTNTFFEFCNAKQGILICTDVAARGLDIPAVDWIVQFDPPDDPRDYIHRVGRTAR-G 437
Query: 727 KEGEG--VLLLAPWEEYFLDDLK--DLPLDKLQLP-HLNPEIQLQMDNHMAKIDNNVKEA 781
+G+G ++ L P E FL LK ++PL++ + P + +Q Q+ + K + + ++
Sbjct: 438 TQGKGKSLMFLTPSELGFLRYLKAANVPLNEYEFPANKIANVQSQL-TKLIKSNFWLHQS 496
Query: 782 A---YHAWLGYYNS-----IREIGRDKTTLVELANKFAQSIGLQRPP 820
A Y ++L Y S + +I DK LV K A+S G PP
Sbjct: 497 AKDGYRSYLQAYASHHLKTVYQI--DKLDLV----KVAKSFGFDVPP 537
>gi|291001779|ref|XP_002683456.1| dead box RNA helicase [Naegleria gruberi]
gi|284097085|gb|EFC50712.1| dead box RNA helicase [Naegleria gruberi]
Length = 907
Score = 217 bits (553), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 153/458 (33%), Positives = 240/458 (52%), Gaps = 26/458 (5%)
Query: 380 RFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIE 439
+F E IS + AL AG++ M +Q+A++ L G+D + A+TG+GK++AF+LP +E
Sbjct: 56 KFLELPISQYSKDALKKAGFVTMKDIQKASILHALGGRDILGAARTGSGKTLAFVLPVLE 115
Query: 440 AVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVD 499
+ + L LIL P RELA QI E + L + LVGGT+ +
Sbjct: 116 LLYRKRWGKLDGL----GALILSPNRELAQQIF-EVLKLCGRYHHFSAGLLVGGTK-NLK 169
Query: 500 QRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIV 559
+ + ILVATPGRLL H++ +G L++LVLDEAD LL+LGFR ++ +I+
Sbjct: 170 EEKEHICNMNILVATPGRLLQHMDETAGFICS--NLQVLVLDEADRLLELGFRNELNSIL 227
Query: 560 DCLPRRRQSLLFSATMPKELV----LKREHTYIDTVGLGSVE-TPVKIKQSCLVAPHELH 614
D LP+ RQ+LLFSAT +++ L T + + + E P ++ Q + E
Sbjct: 228 DGLPKSRQTLLFSATQTRDIKDLARLSLSKTNTEYISVHESEPVPKQLTQHYIECQLEDK 287
Query: 615 FQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVR--EMYSRKPQLYRDR 672
IL LK H + KVIVF ST S L+ + + + ++V+ ++ R Q R
Sbjct: 288 IDILFSFLKSH----QNKKVIVFSSTVKQVSFLHTVFKHLPLSVKMFKLAGRMSQGSRRE 343
Query: 673 ISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGV 732
+ E F ++K +L +D++ARG+D+P V V+Q+ P + YIHR+GRT R +G+ V
Sbjct: 344 MFEGFTSAKAAVLFATDIAARGLDFPRVDFVLQLDAPVSKAFYIHRMGRTARNDADGKSV 403
Query: 733 LLLAPWEE---YFLDDLKDLPLDKLQLPHLNPEIQLQMDNHMAKI---DNNVKEAAYHAW 786
+++ P E+ FL D L L+ +NPE + + +A + D N+K+AA +
Sbjct: 404 VVVTPQEKPLLTFLFDKDSLETGSLKEMKINPEKIVTIRAQLAALLSHDTNLKQAAVKYF 463
Query: 787 LGYYNSI-REIGRDKTTLVELANKFAQSIGLQRPPPLF 823
Y + + G D + FA +GL P L
Sbjct: 464 QTYLKHVYKHYGYDIDFKALNLDAFAVKLGLAIKPVLI 501
>gi|423372414|ref|ZP_17349754.1| hypothetical protein IC5_01470 [Bacillus cereus AND1407]
gi|401098851|gb|EJQ06861.1| hypothetical protein IC5_01470 [Bacillus cereus AND1407]
Length = 454
Score = 217 bits (553), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 136/376 (36%), Positives = 202/376 (53%), Gaps = 19/376 (5%)
Query: 375 ILSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFL 434
+++ K F E GIS L G + T +QE + L GKD + +AKTGTGK++AF+
Sbjct: 1 MVNVKNFLELGISETFNHTLRENGITEATPIQEQAIPVILSGKDIIGQAKTGTGKTLAFV 60
Query: 435 LPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGT 494
LP +E + S + LI+ PTRELA QI E +L + I VL + GG
Sbjct: 61 LPILEKIDPECSD--------VQALIVAPTRELALQITTEIKKMLVQREDINVLAIYGGQ 112
Query: 495 RFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKD 554
R+L+ + I+VATPGRLLDHI ++ + L L +VLDEAD +L GF D
Sbjct: 113 DVAQQLRKLKGN-THIVVATPGRLLDHIRRET---IDLSNLSTIVLDEADQMLYFGFLYD 168
Query: 555 VENIVDCLPRRRQSLLFSATMPKEL--VLKREHTYIDTVGLGSVETPVK-IKQSCLVAPH 611
+E+I+D P +Q++LFSATMPK++ + KR + + S E V I+Q +
Sbjct: 169 IEDILDETPDSKQTMLFSATMPKDIKKLAKRYMDEPQMIQVQSEEVTVNTIEQRVIETTD 228
Query: 612 ELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRD 671
L ++ + ++FC T + S LY L+ + N E++ PQ R+
Sbjct: 229 RAKPDALRFVMDRD----QPFLAVIFCRTKVRASKLYDNLKGLGYNCAELHGDIPQAKRE 284
Query: 672 RISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEG 731
R+ + FR +K L+ +DV+ARG+D VT V IP D E YIHR+GRTGR G G
Sbjct: 285 RVMKSFREAKIQYLIATDVAARGLDVDGVTHVFNYDIPEDVESYIHRIGRTGRAGGSGLA 344
Query: 732 VLLLAPWEEYFLDDLK 747
+ +A +E L++++
Sbjct: 345 ITFVAAKDEKHLEEIE 360
>gi|358396546|gb|EHK45927.1| hypothetical protein TRIATDRAFT_40957 [Trichoderma atroviride IMI
206040]
Length = 812
Score = 217 bits (553), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 130/364 (35%), Positives = 198/364 (54%), Gaps = 20/364 (5%)
Query: 384 CGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLK 443
ISP T L ++ + MT +QE + L+GKD + AKTG+GK++AFL+P +E + +
Sbjct: 57 SAISPATASGLHSSHFTNMTEIQEQAIPLGLKGKDILGAAKTGSGKTLAFLVPVLEKLYR 116
Query: 444 ATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRL 503
A + L LIL PTRELA QI E + + H ++GG K + RL
Sbjct: 117 AQWTEFDGL----GALILSPTRELAVQIF-EVLRKIGRHHAFSAGLVIGGKSLKEEAERL 171
Query: 504 ESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLP 563
ILV TPGR+L H++ +G L++LVLDEAD ++DLGF+ V+ +V+ LP
Sbjct: 172 IR--MNILVCTPGRMLQHLDQTAGFDAN--NLQILVLDEADRIMDLGFQSAVDALVEHLP 227
Query: 564 RRRQSLLFSATMPKEL-----VLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQIL 618
+ RQ+L+FSAT K++ + ++ Y+ + TP ++Q +V P L
Sbjct: 228 KSRQTLMFSATQSKKVSDLARLSLKDPDYVSVHQDATAATPATLQQHYIVTPLPEKIDTL 287
Query: 619 HHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK--MNVREMYSRKPQLYRDRISEE 676
+ +K ++ K+IVF S+G +Y LR ++ + + ++ R+ Q+ R I+
Sbjct: 288 YGFIKANVKS----KIIVFLSSGKQVRFVYESLRHLQPGIPLLHLHGRQKQIARLEITNR 343
Query: 677 FRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLA 736
F A+K L +DV ARG+D+P V V+Q P D + YIHR+GRT R G VL L
Sbjct: 344 FTAAKTSCLFATDVVARGIDFPAVDWVIQADCPEDTDTYIHRVGRTARYESNGRAVLFLD 403
Query: 737 PWEE 740
P EE
Sbjct: 404 PSEE 407
>gi|423383903|ref|ZP_17361159.1| hypothetical protein ICE_01649 [Bacillus cereus BAG1X1-2]
gi|401641163|gb|EJS58884.1| hypothetical protein ICE_01649 [Bacillus cereus BAG1X1-2]
Length = 454
Score = 217 bits (553), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 136/383 (35%), Positives = 201/383 (52%), Gaps = 41/383 (10%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
K F E GIS L G + T +QE + + GKD + +AKTGTGK++AF+LP +
Sbjct: 5 KNFLELGISETFNHTLRENGITEATPIQEKAIPVIMSGKDIIGQAKTGTGKTLAFVLPIL 64
Query: 439 EAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
E + +S + LI+ PTRELA QI E +L + I VL + GG
Sbjct: 65 EKIDPESSD--------VQALIVAPTRELALQITTEIKKMLVQREDINVLAIYGGQDVAQ 116
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
R+L+ + I+VATPGRLLDHI ++ + L L +VLDEAD +L GF D+E+I
Sbjct: 117 QLRKLKGN-THIVVATPGRLLDHIRRET---IDLSNLSTIVLDEADQMLYFGFLYDIEDI 172
Query: 559 VDCLPRRRQSLLFSATMPKEL--------------VLKREHTYIDTVGLGSVETPVKIKQ 604
+D P +Q++LFSATMPK++ ++ E +DT+ +ET + K
Sbjct: 173 LDETPGSKQTMLFSATMPKDIKKLAKRYMDEPQMIQVQSEEVTVDTIEQRIIETTDRAK- 231
Query: 605 SCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSR 664
P L F + + ++FC T + S LY L+ + N E++
Sbjct: 232 -----PDALRFVMDRD---------QPFLAVIFCRTKVRASKLYDNLKGLGYNCAELHGD 277
Query: 665 KPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGR 724
PQ R+R+ + FR +K L+ +DV+ARG+D VT V IP D E YIHR+GRTGR
Sbjct: 278 IPQAKRERVMKSFREAKIQYLIATDVAARGLDVDGVTHVFNFDIPEDVESYIHRIGRTGR 337
Query: 725 EGKEGEGVLLLAPWEEYFLDDLK 747
G G + +A +E L++++
Sbjct: 338 AGGSGLAITFVAAKDEKHLEEIE 360
>gi|212539820|ref|XP_002150065.1| DEAD box RNA helicase (Hca4), putative [Talaromyces marneffei ATCC
18224]
gi|210067364|gb|EEA21456.1| DEAD box RNA helicase (Hca4), putative [Talaromyces marneffei ATCC
18224]
Length = 819
Score = 217 bits (553), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 152/465 (32%), Positives = 246/465 (52%), Gaps = 31/465 (6%)
Query: 371 EEEPILSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKS 430
E +P + + F E +S T L A+ + +T +Q ++ L+G+D + AKTG+GK+
Sbjct: 41 ELDPKVRLESFSELPLSDPTTSGLAASHFKSLTDIQSRSIPYALKGRDILGAAKTGSGKT 100
Query: 431 IAFLLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTL 490
+AFL+P +E + + + L ++L PTRELA QI E + + + +
Sbjct: 101 LAFLIPVLENLYRKKWTEYDGL----GAIVLSPTRELAIQIF-EVLRKVGRYHTFSAGLV 155
Query: 491 VGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLG 550
+GG K +Q RL ILV TPGR+L H++ + L V L+MLVLDEAD ++D+G
Sbjct: 156 IGGKSLKEEQERLGR--MNILVCTPGRMLQHLDQTAELDV--YNLQMLVLDEADRIMDMG 211
Query: 551 FRKDVENIVDCLPRRRQSLLFSATMPKEL-----VLKREHTYIDTVGLGSVETPVKIKQS 605
F+K V+ IV+ LP+ RQ+LLFSAT K++ + ++ Y+ + TP ++Q
Sbjct: 212 FQKTVDAIVEHLPKTRQTLLFSATQTKKVSDLARLSLQDPEYVAVHEAAASATPSTLQQH 271
Query: 606 CLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK--MNVREMYS 663
++ P L ++ ++ K IVF S+G +Y LR ++ + + ++
Sbjct: 272 YIITPLPEKLDTLFSFIRSNLKS----KTIVFMSSGKQVRFVYESLRHLQPGIPLLHLHG 327
Query: 664 RKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTG 723
R+ Q R I+ F SK +L ++DV+ARG+D+P V V+Q+ P D + YIHR+GRT
Sbjct: 328 RQKQGGRLDITTRFANSKHAVLFSTDVAARGLDFPAVDWVIQLDCPEDADTYIHRVGRTA 387
Query: 724 REGKEGEGVLLLAPWEEYFLDDLKDLPLDKLQLPHLNPEIQLQMD-----NHMAKIDNNV 778
R + G VL L P EE + LK L K+ + +N + + Q +M D +
Sbjct: 388 RYERNGRAVLFLDPSEEEGM--LKRLEQKKVPIERINVKAKKQQSVKDQLQNMCFKDPEL 445
Query: 779 KEAAYHAWLGYYNSIREIGRDKTT--LVELA-NKFAQSIGLQRPP 820
K A++ Y SI + +DK + +LA + FA S+GL P
Sbjct: 446 KYLGQKAFISYVKSIH-VQKDKEVFKVKDLALDAFAASLGLPGAP 489
>gi|336470919|gb|EGO59080.1| hypothetical protein NEUTE1DRAFT_120957 [Neurospora tetrasperma
FGSC 2508]
gi|350291989|gb|EGZ73184.1| CYT-19 DEAD-box protein precursor [Neurospora tetrasperma FGSC
2509]
Length = 626
Score = 217 bits (553), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 174/506 (34%), Positives = 268/506 (52%), Gaps = 64/506 (12%)
Query: 385 GISPLTIKALT-AAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLK 443
G+ ++A+T GY MT VQ T+S L+GKD V +AKTGTGK++ FL+P I+ ++
Sbjct: 80 GVHENVVRAITHGMGYENMTEVQSMTISPALKGKDIVAQAKTGTGKTLGFLVPVIQKIIT 139
Query: 444 ATSSSTTQL------VPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFK 497
+ I +I+ PTRELA QI EA L+K GI V T VGGT+
Sbjct: 140 QDPDLAHRFGGKRARSDDIRAIIISPTRELAEQIGEEARKLVKG-TGIIVQTAVGGTQKN 198
Query: 498 VDQRRLESDPCQILVATPGRLLDHI-ENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVE 556
+ C ILV TPGRL D + ++ SG+ L LVLDEAD +L++GF +++
Sbjct: 199 AMLYKTRQQGCHILVGTPGRLNDLLSDSHSGIDAPR--LSTLVLDEADRMLEVGFNEELR 256
Query: 557 NIVDCLPRR----RQSLLFSATMPKELV-LKREHTYIDTVGLGSVET------------- 598
I++ LP R RQ+LL+SAT+PK++V L R +YID V+T
Sbjct: 257 QIINYLPDRKVLPRQTLLYSATIPKDVVGLAR--SYIDKNNFEFVQTVKADEVLTHDRIP 314
Query: 599 ----PVKIKQSCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREM 654
P K ++ A EL + LH K + P +K IVF T + + + +
Sbjct: 315 QYIVPCKGFENIYPAMLELIEKALHES-KTNPEALP-FKAIVFLPTTAEVIMANAIFKRL 372
Query: 655 KMNVR------EMYSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGI 708
+ + +++S+ Q R R ++EF+ ++ IL +SDV+ARGMD+P+V+ V+Q I
Sbjct: 373 QWKFKHIPKTWDIHSKLTQNARTRAADEFKNARTGILFSSDVTARGMDFPNVSHVIQTHI 432
Query: 709 PPDREQYIHRLGRTGREGKEGEGVLLLAPWEEYFL-DDLKDLPL---DKLQLPHLN---- 760
PP+REQYIHRLGRTGR K G+G L++ E + L LP+ D+L+ +N
Sbjct: 433 PPNREQYIHRLGRTGRANKPGQGWLIVPDIELHAARSRLPGLPIKRNDELECASVNAADS 492
Query: 761 -----PEIQLQMDNHMAKIDNNVKEAAYHAWLGYYNSIREIGRDKTTLVELANKFAQ-SI 814
Q +D +++ ++ + Y ++LG +++ G D+ LV N A+
Sbjct: 493 GADKHANFQHILDA-ASRLPEDLFKDCYSSYLG--GALQ--GIDRQALVYALNDLAKFGW 547
Query: 815 GLQRPPPLFRKTALKMGLKDIPGIRL 840
GL PP + R++ LK + + G+R+
Sbjct: 548 GLSEPPAV-RQSILKH-MGRVQGLRV 571
>gi|42781571|ref|NP_978818.1| DEAD/DEAH box helicase [Bacillus cereus ATCC 10987]
gi|42737494|gb|AAS41426.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Bacillus cereus
ATCC 10987]
Length = 447
Score = 217 bits (553), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 137/373 (36%), Positives = 199/373 (53%), Gaps = 21/373 (5%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
K F E GIS L G + T +QE + + GKD + +AKTGTGK++AF+LP +
Sbjct: 2 KNFLELGISETFNHTLRENGITEATPIQEKAIPVIMSGKDIIGQAKTGTGKTLAFVLPIL 61
Query: 439 EAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
E + S + LI+ PTRELA QI E +L D I VL + GG
Sbjct: 62 EKIDPECSD--------VQALIVAPTRELALQITNEIKKMLVQRDDINVLAIYGGQDVAQ 113
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
R+L+ + I+VATPGRLLDHI ++ + L L +VLDEAD +L GF D+E+I
Sbjct: 114 QLRKLKGN-THIVVATPGRLLDHIRRET---IDLSNLSTIVLDEADQMLYFGFLYDIEDI 169
Query: 559 VDCLPRRRQSLLFSATMPKELVLKREHTYID---TVGLGSVETPVK-IKQSCLVAPHELH 614
+D P +Q++LFSATMPK+ + K Y+D + + S E V I+Q +
Sbjct: 170 LDETPGSKQTMLFSATMPKD-IKKLAKRYMDEPQMIQIQSEEVTVNTIEQRVIETTDRAK 228
Query: 615 FQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRIS 674
L ++ + ++FC T + S LY L+ N E++ PQ R+R+
Sbjct: 229 PDALRFVMDRD----QPFLAVIFCRTKVRASKLYDDLKGRGYNCAELHGDIPQAKRERVM 284
Query: 675 EEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLL 734
+ FR +K L+ +DV+ARG+D VT V IP D E YIHR+GRTGR G G +
Sbjct: 285 KSFREAKIQYLIATDVAARGLDVDGVTHVFNYDIPEDVESYIHRIGRTGRAGGSGLAITF 344
Query: 735 LAPWEEYFLDDLK 747
+A +E L++++
Sbjct: 345 VAAKDEKHLEEIE 357
>gi|228958720|ref|ZP_04120433.1| ATP-dependent RNA helicase [Bacillus thuringiensis serovar
pakistani str. T13001]
gi|423627497|ref|ZP_17603246.1| hypothetical protein IK5_00349 [Bacillus cereus VD154]
gi|228800935|gb|EEM47839.1| ATP-dependent RNA helicase [Bacillus thuringiensis serovar
pakistani str. T13001]
gi|401271716|gb|EJR77723.1| hypothetical protein IK5_00349 [Bacillus cereus VD154]
Length = 458
Score = 217 bits (553), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 137/383 (35%), Positives = 201/383 (52%), Gaps = 41/383 (10%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
K F E GIS L G + T +QE + L GKD + +AKTGTGK++AF+LP +
Sbjct: 5 KNFLELGISETFNHTLRENGITEATPIQEKAIPVILSGKDIIGQAKTGTGKTLAFVLPIL 64
Query: 439 EAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
E + +S + LI+ PTRELA QI E +L + I VL + GG
Sbjct: 65 EKIDPESSD--------VQALIVAPTRELALQITTEIKKMLVQREDINVLAIYGGQDVAQ 116
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
R+L+ + I+VATPGRLLDHI ++ + L L +VLDEAD +L GF D+E+I
Sbjct: 117 QLRKLKGN-THIVVATPGRLLDHIRRET---IDLSNLSTIVLDEADQMLYFGFLYDIEDI 172
Query: 559 VDCLPRRRQSLLFSATMPKEL--------------VLKREHTYIDTVGLGSVETPVKIKQ 604
+D P +Q++LFSATMPK++ ++ E +DT+ +ET + K
Sbjct: 173 LDETPGSKQTMLFSATMPKDIKKLAKRYMDEPQMIQVQSEEVTVDTIEQRVIETTDRAK- 231
Query: 605 SCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSR 664
P L F + + ++FC T + S LY L+ + N E++
Sbjct: 232 -----PDALRFVMDRD---------QPFLAVIFCRTKVRASKLYDNLKGLGYNCAELHGD 277
Query: 665 KPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGR 724
PQ R+R+ + FR +K L+ +DV+ARG+D VT V IP D E YIHR+GRTGR
Sbjct: 278 IPQAKRERVMKSFREAKIQYLIATDVAARGLDVDGVTHVFNYDIPEDVESYIHRIGRTGR 337
Query: 725 EGKEGEGVLLLAPWEEYFLDDLK 747
G G + +A +E L++++
Sbjct: 338 AGGSGLAITFVAAKDEKHLEEIE 360
>gi|229044202|ref|ZP_04191878.1| ATP-dependent RNA helicase [Bacillus cereus AH676]
gi|229145047|ref|ZP_04273440.1| ATP-dependent RNA helicase [Bacillus cereus BDRD-ST24]
gi|228638368|gb|EEK94805.1| ATP-dependent RNA helicase [Bacillus cereus BDRD-ST24]
gi|228725143|gb|EEL76424.1| ATP-dependent RNA helicase [Bacillus cereus AH676]
Length = 458
Score = 217 bits (553), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 137/383 (35%), Positives = 201/383 (52%), Gaps = 41/383 (10%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
K F E GIS L G + T +QE + L GKD + +AKTGTGK++AF+LP +
Sbjct: 5 KNFLELGISETFNHTLRENGITEATPIQEKAIPVILSGKDIIGQAKTGTGKTLAFVLPIL 64
Query: 439 EAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
E + +S + LI+ PTRELA QI E +L + I VL + GG
Sbjct: 65 EKIDPESSD--------VQALIVAPTRELALQITTEIKKMLVQREDINVLAIYGGQDVAQ 116
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
R+L+ + I+VATPGRLLDHI ++ + L L +VLDEAD +L GF D+E+I
Sbjct: 117 QLRKLKGN-THIVVATPGRLLDHIRRET---IDLSNLSTIVLDEADQMLYFGFLYDIEDI 172
Query: 559 VDCLPRRRQSLLFSATMPKEL--------------VLKREHTYIDTVGLGSVETPVKIKQ 604
+D P +Q++LFSATMPK++ ++ E +DT+ +ET + K
Sbjct: 173 LDETPGSKQTMLFSATMPKDIKKLAKRYMDEPQMIQVQSEEVTVDTIEQRVIETTDRAK- 231
Query: 605 SCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSR 664
P L F + + ++FC T + S LY L+ + N E++
Sbjct: 232 -----PDALRFVMDRD---------QPFLAVIFCRTKVRASKLYDNLKGLGYNCAELHGD 277
Query: 665 KPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGR 724
PQ R+R+ + FR +K L+ +DV+ARG+D VT V IP D E YIHR+GRTGR
Sbjct: 278 IPQAKRERVMKSFREAKIQYLIATDVAARGLDVDGVTHVFNYDIPEDVESYIHRIGRTGR 337
Query: 725 EGKEGEGVLLLAPWEEYFLDDLK 747
G G + +A +E L++++
Sbjct: 338 AGGSGLAITFVAAKDEKHLEEIE 360
>gi|350637720|gb|EHA26076.1| hypothetical protein ASPNIDRAFT_46856 [Aspergillus niger ATCC 1015]
Length = 516
Score = 217 bits (553), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 154/473 (32%), Positives = 242/473 (51%), Gaps = 51/473 (10%)
Query: 391 IKALTAAGYIQMTRVQEATLSACLEGK-DAVVKAKTGTGKSIAFLLPAIEAVLKATSSST 449
++AL G+ MT VQ+ L+ + + D +V+AKTGTGK++AFLLP + +L +
Sbjct: 10 LQALNVLGFTHMTPVQQRVLTELPDWRSDCLVQAKTGTGKTLAFLLPTLHCLLDGS---- 65
Query: 450 TQLVPP---IYVLILCPTRELASQIAAEAIALLKNHD-GIGVLTLVGGTRFKVDQRRLES 505
+ PP + VLI+ PTRELA QIA L + VGGT R
Sbjct: 66 --MAPPRGQVAVLIVTPTRELAQQIAKSCDQLTSQMAVPLKCDIAVGGTARASAFSRFMR 123
Query: 506 DPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRR 565
+ +LVATPGRL D++ +++L +K L+LDEAD +L+ GF DV++I+ +P +
Sbjct: 124 EAPSVLVATPGRLKDYLSEPEA-AIKLSNIKTLILDEADTMLESGFLADVKHIIRHIPPK 182
Query: 566 R---QSLLFSATMPKEL------VLKREHTYIDTVGLGSVETPVKIKQSCLVAPHEL-HF 615
Q + FSAT+P ++ VLK ++ I T+ T ++ Q ++ P F
Sbjct: 183 SAGWQGMCFSATLPPKVRDVVSVVLKPGYSSISTIDENETPTHERVPQYHVLMPSVADSF 242
Query: 616 QILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLRE--MKMNVREMYSRKPQLYRDRI 673
L +L+ + K+IVF T + SL K++V E++SR Q R +
Sbjct: 243 TTLASVLQLETKNS--SKIIVFGVTANMVSLFAAAFSRGLTKLSVFEIHSRLSQSARTKT 300
Query: 674 SEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVL 733
+ +F+ + IL SDV RGMD+P+V V+QVG+P + EQY+HR+GRT R G +G ++
Sbjct: 301 TAQFKEAAAGILFASDVIGRGMDFPNVDLVIQVGLPTNGEQYVHRVGRTARAGNDGRAII 360
Query: 734 LLAPWEEYFLDDLKDLPLDKLQLPHLNPEIQLQ--------MDNHMAKIDNNVKEAAYHA 785
LL E +FL + + LP+ PH + ++ + M ID K+ AY +
Sbjct: 361 LLTEAETFFLRNNRHLPIQ----PHPQTDAIIEAAASYADTVAEAMYTIDEEKKQRAYSS 416
Query: 786 WLGYYNSIREIGRDKTTLVELANKFAQSIGLQRPPPLFRKTALKMGLKDIPGI 838
++G++ + + + E PP + +K KMGLK IPG
Sbjct: 417 FIGFFAGSGLLKQLRMACPE-------------PPVIDKKIVGKMGLKGIPGF 456
>gi|423648357|ref|ZP_17623927.1| hypothetical protein IKA_02144 [Bacillus cereus VD169]
gi|401284762|gb|EJR90623.1| hypothetical protein IKA_02144 [Bacillus cereus VD169]
Length = 454
Score = 217 bits (553), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 137/383 (35%), Positives = 200/383 (52%), Gaps = 41/383 (10%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
K F E GIS L G + T +QE + L GKD + +AKTGTGK++AF+LP +
Sbjct: 5 KNFLELGISETFNHTLRENGITEATPIQEKAIPVILSGKDIIGQAKTGTGKTLAFVLPIL 64
Query: 439 EAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
E + S + LI+ PTRELA QI E +L + I VL + GG
Sbjct: 65 EKIDPECSD--------VQALIVAPTRELALQITTEIKKMLVQREDINVLAIYGGQDVAQ 116
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
R+L+ + I+VATPGRLLDHI ++ + L L +VLDEAD +L GF D+E+I
Sbjct: 117 QLRKLKGN-THIVVATPGRLLDHIRRET---IDLSNLSTIVLDEADQMLYFGFLYDIEDI 172
Query: 559 VDCLPRRRQSLLFSATMPKEL--------------VLKREHTYIDTVGLGSVETPVKIKQ 604
+D P +Q++LFSATMPK++ ++ E +DT+ +ET + K
Sbjct: 173 LDETPGSKQTMLFSATMPKDIKKLAKRYMDEPQMIQVQSEEVTVDTIEQRVIETTDRAK- 231
Query: 605 SCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSR 664
P L F + + ++FC T + S LY L+ + N E++
Sbjct: 232 -----PDALRFVMDRD---------QPFLAVIFCRTKVRASKLYDNLKGLGYNCAELHGD 277
Query: 665 KPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGR 724
PQ R+R+ + FR +K L+ +DV+ARG+D VT V IP D E YIHR+GRTGR
Sbjct: 278 IPQAKRERVMKSFREAKIQYLIATDVAARGLDVDGVTHVFNFDIPEDVESYIHRIGRTGR 337
Query: 725 EGKEGEGVLLLAPWEEYFLDDLK 747
G G + +A +E L++++
Sbjct: 338 AGGSGLAITFVAAKDEKHLEEIE 360
>gi|85107121|ref|XP_962312.1| hypothetical protein NCU07670 [Neurospora crassa OR74A]
gi|21552987|gb|AAM62413.1|AF497975_1 CYT-19 DEAD-box protein precursor [Neurospora crassa]
gi|28923915|gb|EAA33076.1| predicted protein [Neurospora crassa OR74A]
Length = 626
Score = 217 bits (553), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 170/505 (33%), Positives = 266/505 (52%), Gaps = 62/505 (12%)
Query: 385 GISPLTIKALT-AAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLK 443
G+ ++A+T GY MT VQ T+S L+GKD V +AKTGTGK++ FL+P I+ ++
Sbjct: 80 GVHENVVRAITHGMGYENMTEVQSMTISPALKGKDIVAQAKTGTGKTLGFLVPVIQKIIT 139
Query: 444 ATSSSTTQL------VPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFK 497
+ I +I+ PTRELA QI EA L+K GI V T VGGT+
Sbjct: 140 QDPDLAHRFGGKRARSDDIRAIIISPTRELAEQIGEEARKLVKG-TGIIVQTAVGGTQKN 198
Query: 498 VDQRRLESDPCQILVATPGRLLDHI-ENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVE 556
+ C ILV TPGRL D + ++ SG+ L LVLDEAD +L++GF +++
Sbjct: 199 AMLYKTRQQGCHILVGTPGRLNDLLSDSHSGIDAPR--LSTLVLDEADRMLEVGFNEELR 256
Query: 557 NIVDCLPRR----RQSLLFSATMPKELV-LKREHT------YIDTVGLGSVETPVKIKQS 605
I++ LP R RQ+LL+SAT+PK++V L R + ++ TV V T +I Q
Sbjct: 257 QIINYLPDRKVLPRQTLLYSATIPKDVVGLARSYIDKNNFEFVQTVKADEVLTHDRIPQY 316
Query: 606 CL-------VAPHELHFQILHHLLKEHILGTPD---YKVIVFCSTGMVTSLLYLLLREMK 655
+ + P L +++ L E P+ +K IVF T + + + ++
Sbjct: 317 IVPCKGFENIYPAML--ELIEKALNES-RTNPEALPFKAIVFLPTTAEVIMANAIFKRLQ 373
Query: 656 MNVR------EMYSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIP 709
+ +++S+ Q R R ++EF+ ++ IL +SDV+ARGMD+P+V+ V+Q IP
Sbjct: 374 WKFKHIPKTWDIHSKLTQNARTRAADEFKNARTGILFSSDVTARGMDFPNVSHVIQTHIP 433
Query: 710 PDREQYIHRLGRTGREGKEGEGVLLLAPWEEYFL-DDLKDLPL---DKLQLPHLNPEIQL 765
P+REQYIHRLGRTGR K G+G L++ E + L LP+ D+L+ +N
Sbjct: 434 PNREQYIHRLGRTGRANKPGQGWLIVPDIELHAARSRLPGLPIKRNDELECASVN-AADS 492
Query: 766 QMDNH---------MAKIDNNVKEAAYHAWLGYYNSIREIGRDKTTLVELANKFAQ-SIG 815
D H +++ ++ + Y ++LG +++ G D+ LV N A+ G
Sbjct: 493 GADKHANFQHILDAASRLPEDLFKDCYSSYLG--GALQ--GIDRQALVYALNDLAKFGWG 548
Query: 816 LQRPPPLFRKTALKMGLKDIPGIRL 840
L+ PP + + MG + G+R+
Sbjct: 549 LEEPPAVRQSIMKHMG--RVQGLRV 571
>gi|423563181|ref|ZP_17539457.1| hypothetical protein II5_02585 [Bacillus cereus MSX-A1]
gi|401199258|gb|EJR06163.1| hypothetical protein II5_02585 [Bacillus cereus MSX-A1]
Length = 450
Score = 217 bits (553), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 137/383 (35%), Positives = 200/383 (52%), Gaps = 41/383 (10%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
K F E GIS L G + T +QE + L GKD + +AKTGTGK++AF+LP +
Sbjct: 5 KNFLELGISETFNHTLRENGITEATPIQEKAIPVILSGKDIIGQAKTGTGKTLAFVLPIL 64
Query: 439 EAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
E + S + LI+ PTRELA QI E +L + I VL + GG
Sbjct: 65 EKINPEFSD--------VQALIVAPTRELALQITTEIKKMLVQREDINVLAIYGGQDVAQ 116
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
R+L+ + I+VATPGRLLDHI ++ + L L +VLDEAD +L GF D+E+I
Sbjct: 117 QLRKLKGN-THIVVATPGRLLDHIRRET---IDLSNLSTIVLDEADQMLYFGFLYDIEDI 172
Query: 559 VDCLPRRRQSLLFSATMPKEL--------------VLKREHTYIDTVGLGSVETPVKIKQ 604
+D P +Q++LFSATMPK++ ++ E +DT+ +ET + K
Sbjct: 173 LDETPGSKQTMLFSATMPKDIKKLAKRYMDEPQMIQVQSEEVTVDTIEQRVIETTDRAK- 231
Query: 605 SCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSR 664
P L F + + ++FC T + S LY L+ + N E++
Sbjct: 232 -----PDALRFVMDRD---------QPFLAVIFCRTKVRASKLYDNLKGLGYNCAELHGD 277
Query: 665 KPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGR 724
PQ R+R+ + FR +K L+ +DV+ARG+D VT V IP D E YIHR+GRTGR
Sbjct: 278 IPQAKRERVMKSFREAKIQYLIATDVAARGLDVDGVTHVFNFDIPEDVESYIHRIGRTGR 337
Query: 725 EGKEGEGVLLLAPWEEYFLDDLK 747
G G + +A +E L++++
Sbjct: 338 AGGSGLAITFVAAKDEKHLEEIE 360
>gi|229196679|ref|ZP_04323422.1| ATP-dependent RNA helicase [Bacillus cereus m1293]
gi|228586754|gb|EEK44829.1| ATP-dependent RNA helicase [Bacillus cereus m1293]
Length = 451
Score = 217 bits (553), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 136/372 (36%), Positives = 199/372 (53%), Gaps = 19/372 (5%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
K F E GIS L G + T +QE + L GKD + +AKTGTGK++AF+LP +
Sbjct: 2 KNFLELGISETFNHTLRENGITEATPIQEKAIPVILSGKDIIGQAKTGTGKTLAFVLPIL 61
Query: 439 EAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
E + S + LI+ PTRELA QI E +L + I VL + GG
Sbjct: 62 EKIDPECSD--------VQALIVAPTRELALQITTEIKKMLVQREDINVLAIYGGQDVAQ 113
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
R+L+ + I+VATPGRLLDHI ++ + L L +VLDEAD +L GF D+E+I
Sbjct: 114 QLRKLKGN-THIVVATPGRLLDHIRRET---IDLSNLTTIVLDEADQMLYFGFLYDIEDI 169
Query: 559 VDCLPRRRQSLLFSATMPKEL--VLKREHTYIDTVGLGSVETPVK-IKQSCLVAPHELHF 615
+D P +Q++LFSATMPK++ + KR + + S E V I+Q +
Sbjct: 170 LDETPGSKQTMLFSATMPKDIKKLAKRYMDEPQMIQVQSEEVTVNTIEQRVIETTDRAKP 229
Query: 616 QILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISE 675
L ++ + ++FC T + S LY L+ + N E++ PQ R+R+ +
Sbjct: 230 DALRFVMDRD----QPFLAVIFCRTKVRASKLYDNLKGLGYNCAELHGDIPQAKRERVMK 285
Query: 676 EFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLL 735
FR +K L+ +DV+ARG+D VT V IP D E YIHR+GRTGR G G + +
Sbjct: 286 SFREAKIQYLIATDVAARGLDVDGVTHVFNYDIPEDVESYIHRIGRTGRAGGSGIAITFV 345
Query: 736 APWEEYFLDDLK 747
A +E L++++
Sbjct: 346 AAKDEKHLEEIE 357
>gi|423459512|ref|ZP_17436309.1| hypothetical protein IEI_02652 [Bacillus cereus BAG5X2-1]
gi|401143433|gb|EJQ50968.1| hypothetical protein IEI_02652 [Bacillus cereus BAG5X2-1]
Length = 446
Score = 217 bits (553), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 135/376 (35%), Positives = 202/376 (53%), Gaps = 19/376 (5%)
Query: 375 ILSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFL 434
+++ K F E GIS L G + T +QE + + GKD + +AKTGTGK++AF+
Sbjct: 1 MVNLKNFLELGISETFNHTLRENGITEATPIQEQAIPVIMSGKDIIGQAKTGTGKTLAFV 60
Query: 435 LPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGT 494
LP +E + +S + LI+ PTRELA QI E +L + I VL + GG
Sbjct: 61 LPILEKIDPESSD--------VQALIVAPTRELALQITTEIKKMLVQREDINVLAIYGGQ 112
Query: 495 RFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKD 554
R+L+ + I+VATPGRLLDHI ++ + L L +VLDEAD +L GF D
Sbjct: 113 DVAQQLRKLKGN-THIVVATPGRLLDHIRRET---IDLSNLSTIVLDEADQMLYFGFLYD 168
Query: 555 VENIVDCLPRRRQSLLFSATMPKEL--VLKREHTYIDTVGLGSVETPVK-IKQSCLVAPH 611
+E+I+D P +Q++LFSATMPK++ + KR + + S E V I+Q +
Sbjct: 169 IEDILDETPGSKQTMLFSATMPKDIKKLAKRYMDEPQMIQVQSEEVTVNTIEQRVIETTD 228
Query: 612 ELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRD 671
L ++ + ++FC T + S LY L+ N E++ PQ R+
Sbjct: 229 RAKPDALRFVMDRD----QPFLAVIFCRTKVRASKLYDDLKGRGYNCAELHGDIPQAKRE 284
Query: 672 RISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEG 731
R+ + FR +K L+ +DV+ARG+D VT V IP D E YIHR+GRTGR G G
Sbjct: 285 RVMKSFREAKIQYLIATDVAARGLDVDGVTHVFNFDIPEDVESYIHRIGRTGRAGGSGLA 344
Query: 732 VLLLAPWEEYFLDDLK 747
+ +A +E L++++
Sbjct: 345 ITFVAAKDEKHLEEIE 360
>gi|229091449|ref|ZP_04222660.1| ATP-dependent RNA helicase [Bacillus cereus Rock3-42]
gi|228691890|gb|EEL45636.1| ATP-dependent RNA helicase [Bacillus cereus Rock3-42]
Length = 454
Score = 217 bits (553), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 137/383 (35%), Positives = 201/383 (52%), Gaps = 41/383 (10%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
K F E GIS L G + T +QE + L GKD + +AKTGTGK++AF+LP +
Sbjct: 5 KNFLELGISETFNHTLRENGITEATPIQEKAIPVILSGKDIIGQAKTGTGKTLAFVLPIL 64
Query: 439 EAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
E + +S + LI+ PTRELA QI E +L + I VL + GG
Sbjct: 65 EKIDPESSD--------VQALIVAPTRELALQITTEIKKMLVQREDINVLAIYGGQDVAQ 116
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
R+L+ + I+VATPGRLLDHI ++ + L L +VLDEAD +L GF D+E+I
Sbjct: 117 QLRKLKGN-THIVVATPGRLLDHIRRET---IDLSNLSTIVLDEADQMLYFGFLYDIEDI 172
Query: 559 VDCLPRRRQSLLFSATMPKEL--------------VLKREHTYIDTVGLGSVETPVKIKQ 604
+D P +Q++LFSATMPK++ ++ E +DT+ +ET + K
Sbjct: 173 LDETPGSKQTMLFSATMPKDIKKLAKRYMDEPQMIQVQSEEVTVDTIEQRVIETTDRAK- 231
Query: 605 SCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSR 664
P L F + + ++FC T + S LY L+ + N E++
Sbjct: 232 -----PDALRFVMDRD---------QPFLAVIFCRTKVRASKLYDNLKGLGYNCAELHGD 277
Query: 665 KPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGR 724
PQ R+R+ + FR +K L+ +DV+ARG+D VT V IP D E YIHR+GRTGR
Sbjct: 278 IPQAKRERVMKSFREAKIQYLIATDVAARGLDVDGVTHVFNYDIPEDVESYIHRIGRTGR 337
Query: 725 EGKEGEGVLLLAPWEEYFLDDLK 747
G G + +A +E L++++
Sbjct: 338 AGGSGLAITFVAAKDEKHLEEIE 360
>gi|228933771|ref|ZP_04096617.1| ATP-dependent RNA helicase [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228825843|gb|EEM71630.1| ATP-dependent RNA helicase [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
Length = 451
Score = 217 bits (553), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 137/373 (36%), Positives = 201/373 (53%), Gaps = 21/373 (5%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
K F E GIS L G + T +QE + L GKD + +AKTGTGK++AF+LP +
Sbjct: 2 KNFLELGISETFNHTLRENGITEATPIQEKAIPVILSGKDIIGQAKTGTGKTLAFVLPIL 61
Query: 439 EAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
E + +S + LI+ PTRELA QI E +L + I VL + GG
Sbjct: 62 EKIDPESSD--------VQALIVAPTRELALQITTEIKKMLVQREDINVLAIYGGQDVAQ 113
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
R+L+ + I+VATPGRLLDHI ++ + L L +VLDEAD +L GF D+E+I
Sbjct: 114 QLRKLKGN-THIVVATPGRLLDHIRRET---IDLSNLSTIVLDEADQMLYFGFLYDIEDI 169
Query: 559 VDCLPRRRQSLLFSATMPKELVLKREHTYID---TVGLGSVETPVK-IKQSCLVAPHELH 614
+D P +Q++LFSATMPK+ + K Y+D + + S E V I+Q +
Sbjct: 170 LDETPGSKQTMLFSATMPKD-IKKLAKRYMDEPQMIQVQSEEVTVNTIEQRVIETTDRAK 228
Query: 615 FQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRIS 674
L ++ + ++FC T + S LY L+ + N E++ PQ R+R+
Sbjct: 229 PDALRFVMDRD----QPFLAVIFCRTKVRASKLYDNLKGLGYNCAELHGDIPQAKRERVM 284
Query: 675 EEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLL 734
+ FR +K L+ +DV+ARG+D VT V IP D E YIHR+GRTGR G G +
Sbjct: 285 KSFREAKIQYLIATDVAARGLDVDGVTHVFNYDIPEDVESYIHRIGRTGRAGGSGLAITF 344
Query: 735 LAPWEEYFLDDLK 747
+A +E L++++
Sbjct: 345 VAAKDEKHLEEIE 357
>gi|150863803|ref|XP_001382401.2| RNA-dependent helicase [Scheffersomyces stipitis CBS 6054]
gi|158514819|sp|A3LNR6.2|HAS1_PICST RecName: Full=ATP-dependent RNA helicase HAS1
gi|149385059|gb|ABN64372.2| RNA-dependent helicase [Scheffersomyces stipitis CBS 6054]
Length = 567
Score = 217 bits (553), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 169/521 (32%), Positives = 275/521 (52%), Gaps = 62/521 (11%)
Query: 339 EDEHDFEEQVELIRKEIS--KNKLNGNGEKKEKREEEPIL--------------SQKRFD 382
E + DF+E ++ +++ + K E+K KR+EE +F+
Sbjct: 47 ELDEDFDEVANMLGADVTDPEEKKQSKLERKRKRDEEATAEYTKPEVVDNEDDAQNDKFE 106
Query: 383 ECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAV- 441
+ G+S T++A++ G+ MT+VQ T+ L GKD + AKTG+GK++AFL+PAIE +
Sbjct: 107 DAGLSEPTMRAISDMGFKTMTKVQAKTIPPLLAGKDVLGAAKTGSGKTLAFLIPAIELLY 166
Query: 442 -LKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNH-DGIGVLTLVGGTRFKVD 499
LK + T V+++ PTRELA QI A L+ +H G+ ++GG + +
Sbjct: 167 SLKFKPRNGTG------VIVVSPTRELALQIFGVARELMAHHTQTFGI--VIGGANRRQE 218
Query: 500 QRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIV 559
+L + +L+ATPGRLLDH++N G + LK LV+DEAD +L++GF ++++ I+
Sbjct: 219 AEKL-AKGVNLLIATPGRLLDHLQNTQGFVFK--NLKALVIDEADRILEIGFEEEMKQII 275
Query: 560 DCLPR-RRQSLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHE 612
LP+ RQS+LFSAT + + L+ YI+ V + T ++Q +V +
Sbjct: 276 KILPKEERQSMLFSATQTTKVEDLARISLRPGPLYINVVPETAASTADGLEQGYVVCDSD 335
Query: 613 LHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDR 672
F +L LK++ K+IVF S+ LL + + V +++ ++ Q R
Sbjct: 336 KRFLLLFSFLKKY----SKKKIIVFLSSCNSVKYFGELLNYIDLPVLDLHGKQKQQKRTN 391
Query: 673 ISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEG- 731
EF +K+ LV +DV+ARG+D P V ++Q P D YIHR+GRT R G G+G
Sbjct: 392 TFFEFCNAKQGTLVCTDVAARGLDIPAVDWIIQFDPPDDPRDYIHRVGRTAR-GSNGKGK 450
Query: 732 -VLLLAPWEEYFLDDLK--DLPLDKLQLPHLNPEIQLQMD-NHMAKIDNNVKEAA---YH 784
++ L P E FL LK ++PL++ + P N + +Q + + K + + ++A Y
Sbjct: 451 SLMFLTPSELGFLRYLKAANVPLNEYEFP-TNKIVNIQSQLSKLIKSNYWLHQSAKDGYR 509
Query: 785 AWLGYYNS-----IREIGRDKTTLVELANKFAQSIGLQRPP 820
++L Y S + +I DK LV K A+S G PP
Sbjct: 510 SYLQAYASHHLKTVYQI--DKLDLV----KVAKSFGFDVPP 544
>gi|241663607|ref|YP_002981967.1| DEAD/DEAH box helicase [Ralstonia pickettii 12D]
gi|240865634|gb|ACS63295.1| DEAD/DEAH box helicase domain protein [Ralstonia pickettii 12D]
Length = 493
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 135/382 (35%), Positives = 203/382 (53%), Gaps = 10/382 (2%)
Query: 372 EEPILSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSI 431
E P FD G+ P ++ALT +GY + T +Q A + G+D + A+TGTGK+
Sbjct: 6 EAPANESVTFDSFGLHPDVLRALTESGYTKPTPIQAAAIPVVTAGRDVMGAAQTGTGKTA 65
Query: 432 AFLLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLV 491
F LP I +L ++S + P+ LIL PTRELA Q+ + +A + + +
Sbjct: 66 GFSLPIIHNLLPDANTSASPARHPVRALILTPTRELADQVY-DNVAKYAKYTALRSAVVF 124
Query: 492 GGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGF 551
GG +L +ILVATPGRLLDH++ +S V L ++MLVLDEAD +LD+GF
Sbjct: 125 GGVDMNPQTEQLRRG-VEILVATPGRLLDHVQQRS---VNLSQVRMLVLDEADRMLDMGF 180
Query: 552 RKDVENIVDCLPRRRQSLLFSATMPKELVLKREHTYI---DTVGLG-SVETPVKIKQSCL 607
D++ I++ LP RQ+LLFSAT E + K +Y+ T+ + S T ++Q
Sbjct: 181 LPDLQRIINLLPAHRQTLLFSATFSPE-IKKLAASYLRHPQTIEVARSNATAENVRQVIY 239
Query: 608 VAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQ 667
P L HLLK+ + IVF ++ + S L L +N ++ K Q
Sbjct: 240 TVPDNHKQAALVHLLKQRAEQGLPRQCIVFSNSKIGCSRLARALEREGINANAIHGDKTQ 299
Query: 668 LYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGK 727
R + E F+ +LV +DV+ARG+D + V+ +P + E Y+HR+GRTGR G
Sbjct: 300 TERMQTLEAFKQGTVDVLVATDVAARGLDISQMPCVINFDLPFNAEDYVHRIGRTGRAGA 359
Query: 728 EGEGVLLLAPWEEYFLDDLKDL 749
G+ + L AP +E L D++ L
Sbjct: 360 SGDALSLFAPGDERLLADIEKL 381
>gi|207343942|gb|EDZ71243.1| YJL033Wp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 675
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 163/490 (33%), Positives = 253/490 (51%), Gaps = 44/490 (8%)
Query: 375 ILSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFL 434
I K F + IS T+K L + +I++T +Q ++ L+G D + AKTG+GK++AFL
Sbjct: 37 ITKAKFFKDLPISDPTLKGLRESSFIKLTEIQADSIPVSLQGHDVLAAAKTGSGKTLAFL 96
Query: 435 LPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGT 494
+P IE + + + L LI+ PTRELA QI E + + +H ++GG
Sbjct: 97 VPVIEKLYREKWTEFDGL----GALIISPTRELAMQIY-EVLTKIGSHTSFSAGLVIGGK 151
Query: 495 RFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKD 554
K + R+ IL+ TPGR+L H++ GL+ L+MLVLDEAD LD+GF+K
Sbjct: 152 DVKFELERISR--INILIGTPGRILQHLDQAVGLNTS--NLQMLVLDEADRCLDMGFKKT 207
Query: 555 VENIVDCLPRRRQSLLFSATMPKEL--VLKREHTYIDTVGL-----GSV----ETPVKIK 603
++ IV L RQ+LLFSAT + + + + T TVG GSV TP ++
Sbjct: 208 LDAIVSTLSPSRQTLLFSATQSQSVADLARLSLTDYKTVGTHDVMDGSVNKEASTPETLQ 267
Query: 604 QSCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK--MNVREM 661
Q + P IL +K H+ K+IVF S+ +Y R+M+ +++ +
Sbjct: 268 QFYIEVPLADKLDILFSFIKSHL----KCKMIVFLSSSKQVHFVYETFRKMQPGISLMHL 323
Query: 662 YSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGR 721
+ R+ Q R ++F ++++ L +DV ARG+D+P V VVQV P D + YIHR+GR
Sbjct: 324 HGRQKQRARTETLDKFNRAQQVCLFATDVVARGIDFPAVDWVVQVDCPEDVDTYIHRVGR 383
Query: 722 TGREGKEGEGVLLLAPWEEYFLDDLKDLPLDKLQLPHLNPEIQL------QMDNHMAKID 775
R GK+G+ +++L P E+ LK L K++ LN + Q+ + + K D
Sbjct: 384 CARYGKKGKSLIMLTPQEQEAF--LKRLNARKIEPGKLNIKQSKKKSIKPQLQSLLFK-D 440
Query: 776 NNVKEAAYHAWLGYYNSIREIGRDKTTLV--EL-ANKFAQSIGLQRPPPLFRKTALKMGL 832
+K A++ Y SI + +DK EL +FA S+GL P + K G+
Sbjct: 441 PELKYLGQKAFISYVRSIY-VQKDKQVFKFDELPTEEFAYSLGLPGAPKIKMK-----GM 494
Query: 833 KDIPGIRLRK 842
K I + RK
Sbjct: 495 KTIEQAKERK 504
>gi|1619952|gb|AAB17005.1| putative RNA helicase [Saccharomyces cerevisiae]
Length = 770
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 163/490 (33%), Positives = 253/490 (51%), Gaps = 44/490 (8%)
Query: 375 ILSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFL 434
I K F + IS T+K L + +I++T +Q ++ L+G D + AKTG+GK++AFL
Sbjct: 37 ITKAKFFKDLPISDPTLKGLRESSFIKLTEIQADSIPVSLQGHDVLAAAKTGSGKTLAFL 96
Query: 435 LPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGT 494
+P IE + + + L LI+ PTRELA QI E + + +H ++GG
Sbjct: 97 VPVIEKLYREKWTEFDGL----GALIISPTRELAMQIY-EVLTKIGSHTSFSAGLVIGGK 151
Query: 495 RFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKD 554
K + R+ IL+ TPGR+L H++ GL+ L+MLVLDEAD LD+GF+K
Sbjct: 152 DVKFELERISR--INILIGTPGRILQHLDQAVGLNTS--NLQMLVLDEADRCLDMGFKKT 207
Query: 555 VENIVDCLPRRRQSLLFSATMPKEL--VLKREHTYIDTVGL-----GSV----ETPVKIK 603
++ IV L RQ+LLFSAT + + + + T TVG GSV TP ++
Sbjct: 208 LDAIVSTLSPSRQTLLFSATQSQSVADLARLSLTDYKTVGTHDVMDGSVNKEASTPETLQ 267
Query: 604 QSCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK--MNVREM 661
Q + P IL +K H+ K+IVF S+ +Y R+M+ +++ +
Sbjct: 268 QFYIEVPLADKLDILFSFIKSHL----KCKMIVFLSSSKQVHFVYETFRKMQPGISLMHL 323
Query: 662 YSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGR 721
+ R+ Q R ++F ++++ L +DV ARG+D+P V VVQV P D + YIHR+GR
Sbjct: 324 HGRQKQRARTETLDKFNRAQQVCLFATDVVARGIDFPAVDWVVQVDCPEDVDTYIHRVGR 383
Query: 722 TGREGKEGEGVLLLAPWEEYFLDDLKDLPLDKLQLPHLNPEIQL------QMDNHMAKID 775
R GK+G+ +++L P E+ LK L K++ LN + Q+ + + K D
Sbjct: 384 CARYGKKGKSLIMLTPQEQEAF--LKRLNARKIEPGKLNIKQSKKKSIKPQLQSLLFK-D 440
Query: 776 NNVKEAAYHAWLGYYNSIREIGRDKTTLV--EL-ANKFAQSIGLQRPPPLFRKTALKMGL 832
+K A++ Y SI + +DK EL +FA S+GL P + K G+
Sbjct: 441 PELKYLGQKAFISYVRSIY-VQKDKEVFKFDELPTEEFAYSLGLPGAPKIKMK-----GM 494
Query: 833 KDIPGIRLRK 842
K I + RK
Sbjct: 495 KTIEQAKERK 504
>gi|196039972|ref|ZP_03107275.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Bacillus cereus
NVH0597-99]
gi|196029231|gb|EDX67835.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Bacillus cereus
NVH0597-99]
Length = 458
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 137/383 (35%), Positives = 201/383 (52%), Gaps = 41/383 (10%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
K F E GIS L G + T +QE + L GKD + +AKTGTGK++AF+LP +
Sbjct: 5 KNFLELGISETFNHTLRENGITEATPIQEKAIPVILSGKDIIGQAKTGTGKTLAFVLPIL 64
Query: 439 EAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
E + +S + LI+ PTRELA QI E +L + I VL + GG
Sbjct: 65 EKIDPESSD--------VQALIVAPTRELALQITTEIKKMLVQREDINVLAIYGGQDVAQ 116
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
R+L+ + I+VATPGRLLDHI ++ + L L +VLDEAD +L GF D+E+I
Sbjct: 117 QLRKLKGN-THIVVATPGRLLDHIRRET---IDLSNLSTIVLDEADQMLYFGFLYDIEDI 172
Query: 559 VDCLPRRRQSLLFSATMPKEL--------------VLKREHTYIDTVGLGSVETPVKIKQ 604
+D P +Q++LFSATMPK++ ++ E +DT+ +ET + K
Sbjct: 173 LDETPGSKQTMLFSATMPKDIKKLAKRYMDEPQMIQVQSEEVTVDTIEQRVIETTDRAK- 231
Query: 605 SCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSR 664
P L F + + ++FC T + S LY L+ + N E++
Sbjct: 232 -----PDALRFVMDRD---------QPFLAVIFCRTKVRASKLYDNLKGLGYNCAELHGD 277
Query: 665 KPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGR 724
PQ R+R+ + FR +K L+ +DV+ARG+D VT V IP D E YIHR+GRTGR
Sbjct: 278 IPQAKRERVMKSFREAKIQYLIATDVAARGLDVDGVTHVFNYDIPEDVESYIHRIGRTGR 337
Query: 725 EGKEGEGVLLLAPWEEYFLDDLK 747
G G + +A +E L++++
Sbjct: 338 AGGSGLAITFVAAKDEKHLEEIE 360
>gi|325261674|ref|ZP_08128412.1| ATP-dependent RNA helicase, DEAD/DEAH family [Clostridium sp. D5]
gi|324033128|gb|EGB94405.1| ATP-dependent RNA helicase, DEAD/DEAH family [Clostridium sp. D5]
Length = 527
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 137/418 (32%), Positives = 226/418 (54%), Gaps = 22/418 (5%)
Query: 376 LSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLL 435
+ + RF++ G+ P +KA+ G+ + + +Q + GKD + +A+TGTGK+ AF +
Sbjct: 1 MEEARFEDLGLCPEIVKAVKKMGFEEASPIQAKAIPVMKSGKDIIGQAQTGTGKTAAFGI 60
Query: 436 PAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTR 495
P +E + + ++LCPTRELA Q+A E L K GI VL + GG
Sbjct: 61 PLLEKIEPKNKK--------LQAVVLCPTRELAIQVAEEIRNLAKYMHGIKVLPIYGGQE 112
Query: 496 FKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDV 555
R L+S Q+++ TPGR++DH+ K+ +++ + +VLDEAD +L++GFR+D+
Sbjct: 113 IVTQIRSLKSG-TQLIIGTPGRVMDHMRRKT---IKMDEVHTIVLDEADEMLNMGFREDI 168
Query: 556 ENIVDCLPRRRQSLLFSATMPKEL--VLKREHTYIDTVGLGSVETPV-KIKQSCLVAPHE 612
E I++ +P RQ++LFSATMP+ + + KR + V + E V I+Q +
Sbjct: 169 ETILEGVPEERQTVLFSATMPQAILDITKRFQKNAEIVKVTKKELTVPNIEQYYYEVKPK 228
Query: 613 LHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDR 672
++L LL + +P V VFC+T +L L ++ Q RDR
Sbjct: 229 SKEEVLARLLDIY---SPKLSV-VFCNTKKQVDILVNGLLGRGYFAAGLHGDLKQQQRDR 284
Query: 673 ISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGV 732
+ + FR+ K ILV +DV+ARG+D +V +V +P D E Y+HR+GRTGR G+EG
Sbjct: 285 VMQGFRSGKTDILVATDVAARGIDVEEVEAVFNYDLPQDDEYYVHRIGRTGRAGREGRSF 344
Query: 733 LLLAPWEEYFLDDLKDLPLDKL---QLPHLNPEIQLQMDNHMAKIDNNVKEAAYHAWL 787
++ E Y L +++ K+ ++P LN +M+N + +IDN ++ +L
Sbjct: 345 SFVSGKEVYKLKEIQRYCKTKIYAQKVPSLNDVANTKMENILGEIDNIIETEDLTKYL 402
>gi|206971476|ref|ZP_03232426.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Bacillus cereus
AH1134]
gi|206733461|gb|EDZ50633.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Bacillus cereus
AH1134]
Length = 458
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 137/383 (35%), Positives = 202/383 (52%), Gaps = 41/383 (10%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
K F E GIS L G + T +QE + + GKD + +AKTGTGK++AF+LP +
Sbjct: 5 KNFLELGISETFNHTLRENGITEATPIQEKAIPVIMSGKDIIGQAKTGTGKTLAFVLPIL 64
Query: 439 EAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
E + +S + LI+ PTRELA QI E +L + I VL + GG
Sbjct: 65 EKIDPESSD--------VQALIVAPTRELALQITTEIKKMLVQREDINVLAIYGGQDVAQ 116
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
R+L+ + I+VATPGRLLDHI ++ + L L +VLDEAD +L GF D+E+I
Sbjct: 117 QLRKLKGN-THIVVATPGRLLDHIRRET---IDLSNLSTIVLDEADQMLYFGFLYDIEDI 172
Query: 559 VDCLPRRRQSLLFSATMPKEL--------------VLKREHTYIDTVGLGSVETPVKIKQ 604
+D P +Q++LFSATMPK++ ++ E +DT+ +ET + K
Sbjct: 173 LDETPDSKQTMLFSATMPKDIKKLAKRYMDEPQMIQVQSEEVTVDTIEQRVIETTDRAK- 231
Query: 605 SCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSR 664
P L F I+ + ++FC T + S LY L+ + N E++
Sbjct: 232 -----PDALRF-IMDR--------DQPFLAVIFCRTKVRASKLYDNLKGLGYNCAELHGD 277
Query: 665 KPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGR 724
PQ R+R+ + FR +K L+ +DV+ARG+D VT V IP D E YIHR+GRTGR
Sbjct: 278 IPQAKRERVMKSFREAKIQYLIATDVAARGLDVDGVTHVFNFDIPEDVESYIHRIGRTGR 337
Query: 725 EGKEGEGVLLLAPWEEYFLDDLK 747
G G + +A +E L++++
Sbjct: 338 AGGSGLAITFVAAKDEKHLEEIE 360
>gi|228915063|ref|ZP_04078662.1| ATP-dependent RNA helicase [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
gi|228844597|gb|EEM89649.1| ATP-dependent RNA helicase [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
Length = 447
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 136/383 (35%), Positives = 199/383 (51%), Gaps = 41/383 (10%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
K F E GIS L G + T +QE + L GKD + +AKTGTGK++AF+LP +
Sbjct: 2 KNFLELGISETFNHTLRENGITEATPIQEKAIPVILSGKDIIGQAKTGTGKTLAFVLPIL 61
Query: 439 EAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
E + + LI+ PTRELA QI E +L + I VL + GG
Sbjct: 62 EKIDPECGD--------VQALIVAPTRELALQITTEIKKMLVQREDINVLAIYGGQDVAQ 113
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
R+L+ + I+VATPGRLLDHI ++ + L L +VLDEAD +L GF D+E+I
Sbjct: 114 QLRKLKGN-THIVVATPGRLLDHIRRET---IDLSNLSTIVLDEADQMLYFGFLYDIEDI 169
Query: 559 VDCLPRRRQSLLFSATMPKEL--------------VLKREHTYIDTVGLGSVETPVKIKQ 604
+D P +Q++LFSATMPK++ ++ E +DT+ +ET + K
Sbjct: 170 LDETPGSKQTMLFSATMPKDIKKLAKRYMDEPQMIQVQSEEVTVDTIEQRVIETTDRAK- 228
Query: 605 SCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSR 664
P L F + + ++FC T + S LY L+ + N E++
Sbjct: 229 -----PDALRFVMDRD---------QPFLAVIFCRTKVRASKLYDNLKGLGYNCAELHGD 274
Query: 665 KPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGR 724
PQ R+R+ + FR +K L+ +DV+ARG+D VT V IP D E YIHR+GRTGR
Sbjct: 275 IPQAKRERVMKSFREAKIQYLIATDVAARGLDVDGVTHVFNYDIPEDVESYIHRIGRTGR 334
Query: 725 EGKEGEGVLLLAPWEEYFLDDLK 747
G G + +A +E L++++
Sbjct: 335 AGGSGLAITFVAAKDEKHLEEIE 357
>gi|290771182|emb|CAY80746.2| Hca4p [Saccharomyces cerevisiae EC1118]
Length = 770
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 163/490 (33%), Positives = 253/490 (51%), Gaps = 44/490 (8%)
Query: 375 ILSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFL 434
I K F + IS T+K L + +I++T +Q ++ L+G D + AKTG+GK++AFL
Sbjct: 37 ITKAKFFKDLPISDPTLKGLRESSFIKLTEIQADSIPVSLQGHDVLAAAKTGSGKTLAFL 96
Query: 435 LPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGT 494
+P IE + + + L LI+ PTRELA QI E + + +H ++GG
Sbjct: 97 VPVIEKLYREKWTEFDGL----GALIISPTRELAMQIY-EVLTKIGSHTSFSAGLVIGGK 151
Query: 495 RFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKD 554
K + R+ IL+ TPGR+L H++ GL+ L+MLVLDEAD LD+GF+K
Sbjct: 152 DVKFELERISR--INILIGTPGRILQHLDQAVGLNTS--NLQMLVLDEADRCLDMGFKKT 207
Query: 555 VENIVDCLPRRRQSLLFSATMPKEL--VLKREHTYIDTVGL-----GSV----ETPVKIK 603
++ IV L RQ+LLFSAT + + + + T TVG GSV TP ++
Sbjct: 208 LDAIVSTLSPSRQTLLFSATQSQSVADLARLSLTDYKTVGTHDVMDGSVNKEASTPETLQ 267
Query: 604 QSCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK--MNVREM 661
Q + P IL +K H+ K+IVF S+ +Y R+M+ +++ +
Sbjct: 268 QFYIEVPLADKLDILFSFIKSHL----KCKMIVFLSSSKQVHFVYETFRKMQPGISLMHL 323
Query: 662 YSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGR 721
+ R+ Q R ++F ++++ L +DV ARG+D+P V VVQV P D + YIHR+GR
Sbjct: 324 HGRQKQRARTETLDKFNRAQQVCLFATDVVARGIDFPAVDWVVQVDCPEDVDTYIHRVGR 383
Query: 722 TGREGKEGEGVLLLAPWEEYFLDDLKDLPLDKLQLPHLNPEIQL------QMDNHMAKID 775
R GK+G+ +++L P E+ LK L K++ LN + Q+ + + K D
Sbjct: 384 CARYGKKGKSLIMLTPQEQEAF--LKRLNARKIEPGKLNIKQSKKKSIKPQLQSLLFK-D 440
Query: 776 NNVKEAAYHAWLGYYNSIREIGRDKTTLV--EL-ANKFAQSIGLQRPPPLFRKTALKMGL 832
+K A++ Y SI + +DK EL +FA S+GL P + K G+
Sbjct: 441 PELKYLGQKAFISYVRSIY-VQKDKQVFKFDELPTEEFAYSLGLPGAPKIKMK-----GM 494
Query: 833 KDIPGIRLRK 842
K I + RK
Sbjct: 495 KTIEQAKERK 504
>gi|190409466|gb|EDV12731.1| RNA helicase [Saccharomyces cerevisiae RM11-1a]
gi|256271064|gb|EEU06165.1| Hca4p [Saccharomyces cerevisiae JAY291]
gi|323337099|gb|EGA78355.1| Hca4p [Saccharomyces cerevisiae Vin13]
Length = 770
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 163/490 (33%), Positives = 253/490 (51%), Gaps = 44/490 (8%)
Query: 375 ILSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFL 434
I K F + IS T+K L + +I++T +Q ++ L+G D + AKTG+GK++AFL
Sbjct: 37 ITKAKFFKDLPISDPTLKGLRESSFIKLTEIQADSIPVSLQGHDVLAAAKTGSGKTLAFL 96
Query: 435 LPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGT 494
+P IE + + + L LI+ PTRELA QI E + + +H ++GG
Sbjct: 97 VPVIEKLYREKWTEFDGL----GALIISPTRELAMQIY-EVLTKIGSHTSFSAGLVIGGK 151
Query: 495 RFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKD 554
K + R+ IL+ TPGR+L H++ GL+ L+MLVLDEAD LD+GF+K
Sbjct: 152 DVKFELERISR--INILIGTPGRILQHLDQAVGLNTS--NLQMLVLDEADRCLDMGFKKT 207
Query: 555 VENIVDCLPRRRQSLLFSATMPKEL--VLKREHTYIDTVGL-----GSV----ETPVKIK 603
++ IV L RQ+LLFSAT + + + + T TVG GSV TP ++
Sbjct: 208 LDAIVSTLSPSRQTLLFSATQSQSVADLARLSLTDYKTVGTHDVMDGSVNKEASTPETLQ 267
Query: 604 QSCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK--MNVREM 661
Q + P IL +K H+ K+IVF S+ +Y R+M+ +++ +
Sbjct: 268 QFYIEVPLADKLDILFSFIKSHL----KCKMIVFLSSSKQVHFVYETFRKMQPGISLMHL 323
Query: 662 YSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGR 721
+ R+ Q R ++F ++++ L +DV ARG+D+P V VVQV P D + YIHR+GR
Sbjct: 324 HGRQKQRARTETLDKFNRAQQVCLFATDVVARGIDFPAVDWVVQVDCPEDVDTYIHRVGR 383
Query: 722 TGREGKEGEGVLLLAPWEEYFLDDLKDLPLDKLQLPHLNPEIQL------QMDNHMAKID 775
R GK+G+ +++L P E+ LK L K++ LN + Q+ + + K D
Sbjct: 384 CARYGKKGKSLIMLTPQEQEAF--LKRLNARKIEPGKLNIKQSKKKSIKPQLQSLLFK-D 440
Query: 776 NNVKEAAYHAWLGYYNSIREIGRDKTTLV--EL-ANKFAQSIGLQRPPPLFRKTALKMGL 832
+K A++ Y SI + +DK EL +FA S+GL P + K G+
Sbjct: 441 PELKYLGQKAFISYVRSIY-VQKDKQVFKFDELPTEEFAYSLGLPGAPKIKMK-----GM 494
Query: 833 KDIPGIRLRK 842
K I + RK
Sbjct: 495 KTIEQAKERK 504
>gi|296502998|ref|YP_003664698.1| ATP-dependent RNA helicase [Bacillus thuringiensis BMB171]
gi|296324050|gb|ADH06978.1| ATP-dependent RNA helicase [Bacillus thuringiensis BMB171]
Length = 455
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 137/383 (35%), Positives = 200/383 (52%), Gaps = 41/383 (10%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
K F E GIS L G + T +QE + L GKD + +AKTGTGK++AF+LP +
Sbjct: 2 KNFLELGISETFNHTLRENGITEATPIQEKAIPVILSGKDIIGQAKTGTGKTLAFVLPIL 61
Query: 439 EAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
E + S + LI+ PTRELA QI E +L + I VL + GG
Sbjct: 62 EKIDPECSD--------VQALIVAPTRELALQITTEIKKMLVQREDINVLAIYGGQDVAQ 113
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
R+L+ + I+VATPGRLLDHI ++ + L L +VLDEAD +L GF D+E+I
Sbjct: 114 QLRKLKGN-THIVVATPGRLLDHIRRET---IDLSNLSTIVLDEADQMLYFGFLYDIEDI 169
Query: 559 VDCLPRRRQSLLFSATMPKEL--------------VLKREHTYIDTVGLGSVETPVKIKQ 604
+D P +Q++LFSATMPK++ ++ E +DT+ +ET + K
Sbjct: 170 LDETPGSKQTMLFSATMPKDIKKLAKRYMDEPQMIQVQSEEVTVDTIEQRVIETTDRAK- 228
Query: 605 SCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSR 664
P L F + + ++FC T + S LY L+ + N E++
Sbjct: 229 -----PDALRFVMDRD---------QPFLAVIFCRTKVRASKLYDNLKGLGYNCAELHGD 274
Query: 665 KPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGR 724
PQ R+R+ + FR +K L+ +DV+ARG+D VT V IP D E YIHR+GRTGR
Sbjct: 275 IPQAKRERVMKSFREAKIQYLIATDVAARGLDVDGVTHVFNYDIPEDVESYIHRIGRTGR 334
Query: 725 EGKEGEGVLLLAPWEEYFLDDLK 747
G G + +A +E L++++
Sbjct: 335 AGGSGLAITFVAAKDEKHLEEIE 357
>gi|229030176|ref|ZP_04186236.1| ATP-dependent RNA helicase [Bacillus cereus AH1271]
gi|228731134|gb|EEL82056.1| ATP-dependent RNA helicase [Bacillus cereus AH1271]
Length = 446
Score = 217 bits (552), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 136/373 (36%), Positives = 200/373 (53%), Gaps = 21/373 (5%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
K F E GIS L G + T +QE + + GKD + +AKTGTGK++AF+LP +
Sbjct: 5 KNFLELGISETFNHTLRENGITEATPIQEQAIPVIMSGKDIIGQAKTGTGKTLAFVLPIL 64
Query: 439 EAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
E + S + LI+ PTRELA QI E +L + I VL + GG
Sbjct: 65 EKIDPECSD--------VQALIVAPTRELALQITTEIKKMLVQREDINVLAIYGGQDVAQ 116
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
R+L+ + I+VATPGRLLDHI ++ + L L +VLDEAD +L GF D+E+I
Sbjct: 117 QLRKLKGN-THIVVATPGRLLDHIRRET---IDLSNLSTIVLDEADQMLYFGFLYDIEDI 172
Query: 559 VDCLPRRRQSLLFSATMPKELVLKREHTYID---TVGLGSVETPVK-IKQSCLVAPHELH 614
+D P +Q++LFSATMPK+ + K Y+D + + S E V I+Q +
Sbjct: 173 LDETPDSKQTMLFSATMPKD-IKKLAKRYMDEPQMIQVQSEEVTVNTIEQRVIETTDRAK 231
Query: 615 FQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRIS 674
L ++ + ++FC T + S LY L+ + N E++ PQ R+R+
Sbjct: 232 PDALRFVMDRD----QPFLAVIFCRTKVRASKLYDNLKGLGYNCAELHGDIPQAKRERVM 287
Query: 675 EEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLL 734
+ FR +K L+ +DV+ARG+D VT V IP D E YIHR+GRTGR G G +
Sbjct: 288 KSFREAKIQYLIATDVAARGLDVDGVTHVFNFDIPEDVESYIHRIGRTGRAGGSGIAITF 347
Query: 735 LAPWEEYFLDDLK 747
+A +E L++++
Sbjct: 348 VAAKDEKHLEEIE 360
>gi|423587115|ref|ZP_17563202.1| hypothetical protein IIE_02527 [Bacillus cereus VD045]
gi|423642524|ref|ZP_17618142.1| hypothetical protein IK9_02469 [Bacillus cereus VD166]
gi|401229005|gb|EJR35524.1| hypothetical protein IIE_02527 [Bacillus cereus VD045]
gi|401276579|gb|EJR82530.1| hypothetical protein IK9_02469 [Bacillus cereus VD166]
Length = 458
Score = 217 bits (552), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 137/383 (35%), Positives = 200/383 (52%), Gaps = 41/383 (10%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
K F E GIS L G + T +QE + L GKD + +AKTGTGK++AF+LP +
Sbjct: 5 KNFLELGISETFNHTLRENGITEATPIQEKAIPVILSGKDIIGQAKTGTGKTLAFVLPIL 64
Query: 439 EAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
E + S + LI+ PTRELA QI E +L + I VL + GG
Sbjct: 65 EKIDPECSD--------VQALIVAPTRELALQITTEIKKMLVQREDINVLAIYGGQDVAQ 116
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
R+L+ + I+VATPGRLLDHI ++ + L L +VLDEAD +L GF D+E+I
Sbjct: 117 QLRKLKGN-THIVVATPGRLLDHIRRET---IDLSNLSTIVLDEADQMLYFGFLYDIEDI 172
Query: 559 VDCLPRRRQSLLFSATMPKEL--------------VLKREHTYIDTVGLGSVETPVKIKQ 604
+D P +Q++LFSATMPK++ ++ E +DT+ +ET + K
Sbjct: 173 LDETPGSKQTMLFSATMPKDIKKLAKRYMDEPQMIQVQSEEVTVDTIEQRVIETTDRAK- 231
Query: 605 SCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSR 664
P L F + + ++FC T + S LY L+ + N E++
Sbjct: 232 -----PDALRFVMDRD---------QPFLAVIFCRTKVRASKLYDNLKGLGYNCAELHGD 277
Query: 665 KPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGR 724
PQ R+R+ + FR +K L+ +DV+ARG+D VT V IP D E YIHR+GRTGR
Sbjct: 278 IPQAKRERVMKSFREAKIQYLIATDVAARGLDVDGVTHVFNFDIPEDVESYIHRIGRTGR 337
Query: 725 EGKEGEGVLLLAPWEEYFLDDLK 747
G G + +A +E L++++
Sbjct: 338 AGGSGLAITFVAAKDEKHLEEIE 360
>gi|222096052|ref|YP_002530109.1| ATP-dependent RNA helicase [Bacillus cereus Q1]
gi|221240110|gb|ACM12820.1| ATP-dependent RNA helicase [Bacillus cereus Q1]
Length = 451
Score = 217 bits (552), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 136/372 (36%), Positives = 199/372 (53%), Gaps = 19/372 (5%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
K F E GIS L G + T +QE + L GKD + +AKTGTGK++AF+LP +
Sbjct: 2 KNFLELGISETFNHTLRENGITEATPIQEQAIPVILSGKDIIGQAKTGTGKTLAFVLPIL 61
Query: 439 EAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
E + S + LI+ PTRELA QI E +L + I VL + GG
Sbjct: 62 EKIDPECSD--------VQALIVAPTRELALQITTEIKKMLVQREDINVLAIYGGQDVAQ 113
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
R+L+ + I+VATPGRLLDHI ++ + L L +VLDEAD +L GF D+E+I
Sbjct: 114 QLRKLKGN-THIVVATPGRLLDHIRRET---IDLSNLSTIVLDEADQMLYFGFLYDIEDI 169
Query: 559 VDCLPRRRQSLLFSATMPKEL--VLKREHTYIDTVGLGSVETPVK-IKQSCLVAPHELHF 615
+D P +Q++LFSATMPK++ + KR + + S E V I+Q +
Sbjct: 170 LDETPDSKQTMLFSATMPKDIKKLAKRYMDEPQMIQVQSEEVTVNTIEQRVIETTDRAKP 229
Query: 616 QILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISE 675
L ++ + ++FC T + S LY L+ + N E++ PQ R+R+ +
Sbjct: 230 DALRFVMDRD----QPFLAVIFCRTKVRASKLYDNLKGLGYNCAELHGDIPQAKRERVMK 285
Query: 676 EFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLL 735
FR +K L+ +DV+ARG+D VT V IP D E YIHR+GRTGR G G + +
Sbjct: 286 SFREAKIQYLIATDVAARGLDVDGVTHVFNYDIPEDVESYIHRIGRTGRAGGSGLAITFV 345
Query: 736 APWEEYFLDDLK 747
A +E L++++
Sbjct: 346 AAKDEKHLEEIE 357
>gi|294655023|ref|XP_457109.2| DEHA2B03322p [Debaryomyces hansenii CBS767]
gi|218512020|sp|Q6BXG0.2|DBP4_DEBHA RecName: Full=ATP-dependent RNA helicase DBP4
gi|199429633|emb|CAG85100.2| DEHA2B03322p [Debaryomyces hansenii CBS767]
Length = 766
Score = 217 bits (552), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 145/473 (30%), Positives = 248/473 (52%), Gaps = 43/473 (9%)
Query: 373 EPILSQK---RFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGK 429
+P++ +K +F + IS T + L A + +T +Q+ T+ L+G+D + AKTG+GK
Sbjct: 37 DPVVDEKSISQFSDLPISEETARGLKEASFASLTDIQKKTIPISLKGEDVMGTAKTGSGK 96
Query: 430 SIAFLLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLT 489
++AFL+P IE++++ + L LI+ PTRELA QI E + + H+
Sbjct: 97 TLAFLIPTIESLIRNKITEYDGLA----ALIISPTRELAVQIF-EVLVKIGKHNNFSAGL 151
Query: 490 LVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDL 549
+ GG K ++ R+ ILV TPGR+ H+ G+ L++LVLDEAD LD+
Sbjct: 152 VTGGKDVKYEKERVSK--MNILVGTPGRISQHLNESVGMETS--NLQVLVLDEADRCLDM 207
Query: 550 GFRKDVENIVDCLPRRRQSLLFSATMPKEL--VLKREHTYIDTVGLGSVE----TPVKIK 603
GF+K ++NI+ LP RQ+LLFSAT + + + VG+ S + TP ++
Sbjct: 208 GFKKQIDNILGHLPPTRQTLLFSATQSDSVKDLARLSLANPKRVGISSDQELSATPESLE 267
Query: 604 QSCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK--MNVREM 661
Q + P + +L +K H+ K++VF S+ Y R ++ +++ ++
Sbjct: 268 QYYIKIPLDEKLDVLWSFIKSHLKS----KILVFFSSSKQVQYAYETFRTLQPGISLLKL 323
Query: 662 YSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGR 721
Y R Q R + +F ++ L +D+ ARG+D+P + VVQ+ P D Y+HR+GR
Sbjct: 324 YGRHKQTSRMETTMKFSQAQHACLFATDIVARGLDFPAIDWVVQIDCPEDAATYVHRVGR 383
Query: 722 TGREGKEGEGVLLLAPWEEYFLDDLKDLPLDKLQLPHLN----------PEIQLQMDNHM 771
R G+ G+ +++L P EE + LK L +K++L +N P++Q +
Sbjct: 384 AARFGRAGKSLMMLLPSEENGM--LKRLNNNKIELKFMNIKQKNKKTIRPQLQ-----SL 436
Query: 772 AKIDNNVKEAAYHAWLGYYNSIR-EIGRDKTTLVEL-ANKFAQSIGLQRPPPL 822
D +K A++ Y+ S+ + +D + EL ++KFA+S+GL P +
Sbjct: 437 CFQDPMIKNLGQRAFISYFRSVYVQKDKDIFKIDELPSDKFARSLGLPGAPKI 489
>gi|295667643|ref|XP_002794371.1| ATP-dependent RNA helicase DBP4 [Paracoccidioides sp. 'lutzii'
Pb01]
gi|226286477|gb|EEH42043.1| ATP-dependent RNA helicase DBP4 [Paracoccidioides sp. 'lutzii'
Pb01]
Length = 816
Score = 217 bits (552), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 147/456 (32%), Positives = 240/456 (52%), Gaps = 33/456 (7%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F + +S ++ L+A+ + +T +Q L L+G+D + AKTG+GK++AFL+P +E
Sbjct: 51 FSDLPLSEASLDGLSASHFKTLTSIQAKALPHALKGRDILGAAKTGSGKTLAFLVPLLEL 110
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+ + + L L+L PTRELA QI E + + H ++GG + +Q
Sbjct: 111 LYRKQWTEYDGL----GALVLSPTRELAIQIF-EVLRKIGRHHSFSAGLVIGGKSLQEEQ 165
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
RL ILV TPGR+L H++ + +++LVLDEAD ++D+GF+ V+ IV+
Sbjct: 166 ERLGR--MNILVCTPGRMLQHMDQTAAFDTNR--IQLLVLDEADRIMDMGFQNTVDAIVE 221
Query: 561 CLPRRRQSLLFSATMPKEL-----VLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHF 615
LP+ RQ++LFSAT +++ + R+ YI S TP K+ Q+ +V P
Sbjct: 222 HLPKERQTMLFSATQTQKVSDLARLSLRDPEYISVHEAASSATPAKLHQNYIVTPLPEKL 281
Query: 616 QILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK--MNVREMYSRKPQLYRDRI 673
L ++ + K++VF S+G +Y R M+ +++ ++ R+ Q R I
Sbjct: 282 DTLWSFIRSSLKS----KIMVFFSSGKQVRFVYESFRHMQPGISLLHLHGRQKQGARVDI 337
Query: 674 SEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVL 733
+++F +K L +D++ARG+D+P V V+QV P D + YIHR GRT R + G VL
Sbjct: 338 TKKFSVAKHACLFATDIAARGLDFPAVDWVIQVDCPEDADTYIHRAGRTARYERNGRAVL 397
Query: 734 LLAPWEEYFLDDLKDLPLDKLQLPHLN------PEIQLQMDNHMAKIDNNVKEAAYHAWL 787
L P EE + LK L K+ + +N I+ Q+ N M D +K A++
Sbjct: 398 FLDPTEEAAM--LKRLEQRKIPIEKINVRTKKQQSIKNQLQN-MCFKDPALKYLGQKAFI 454
Query: 788 GYYNSIREIGRDKTTLV--ELA-NKFAQSIGLQRPP 820
Y SI + +DK V +L ++A+S+GL P
Sbjct: 455 SYVKSIH-VQKDKEVFVVKDLPLEEYAESLGLPGAP 489
>gi|367014679|ref|XP_003681839.1| hypothetical protein TDEL_0E03850 [Torulaspora delbrueckii]
gi|359749500|emb|CCE92628.1| hypothetical protein TDEL_0E03850 [Torulaspora delbrueckii]
Length = 761
Score = 216 bits (551), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 152/461 (32%), Positives = 242/461 (52%), Gaps = 34/461 (7%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F + IS T+K L A ++++T +Q ++ L+G D + AKTG+GK++AFL+P +E
Sbjct: 43 FRDLPISDATLKGLKEAAFVKLTEIQRESIPVSLKGHDLLGAAKTGSGKTLAFLIPVLEK 102
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+ + + L LI+ PTRELA QI E + + H ++GG K +
Sbjct: 103 LYREKWTEFDGL----GALIISPTRELAMQIY-EVLTKIGGHTSFSAGLVIGGKDVKFEL 157
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
R+ ILV TPGR+L H++ GL+ L+MLVLDEAD LD+GF+K ++ IV
Sbjct: 158 ERISR--INILVGTPGRILQHMDQAVGLNAD--NLQMLVLDEADRCLDMGFKKTLDAIVS 213
Query: 561 CLPRRRQSLLFSATMPKELVLKREHTYIDTVGLGS----------VETPVKIKQSCLVAP 610
LP RQ+LLFSAT + L + D +G+ V TP ++QS +V
Sbjct: 214 NLPPSRQTLLFSATQSQSLADLARLSLTDYKSVGTADTVNGGDSEVSTPETLQQSYIVVE 273
Query: 611 HELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK--MNVREMYSRKPQL 668
L +K H+ K+IVF S+ +Y R+M+ +++ ++ R+ Q
Sbjct: 274 LADKLDTLFSFIKTHL----KSKMIVFLSSSKQVHFVYETFRKMQPGISLMHLHGRQKQT 329
Query: 669 YRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKE 728
R ++F ++++ L+ +DV ARG+D+P V VVQV P D + YIHR+GR+ R GK+
Sbjct: 330 ARTETLDKFSRAQQVCLIATDVVARGIDFPAVDWVVQVDCPEDVDTYIHRVGRSARYGKQ 389
Query: 729 GEGVLLLAPWEEY-FLDDLKDLPLDKLQLPHLNPEIQL---QMDNHMAKIDNNVKEAAYH 784
G+ +++L P EE FL LK ++ L + + Q+ + + K D +K
Sbjct: 390 GKSLIMLTPTEEEGFLKRLKARKIEPSMLTIKQSKKKSIKPQLQSLLFK-DPELKYLGQK 448
Query: 785 AWLGYYNSIREIGRDKTTLV--ELANK-FAQSIGLQRPPPL 822
A++ Y SI I +D+ EL + +A S+GL P +
Sbjct: 449 AFISYIRSIY-IQKDREVFKFDELPTEDYALSLGLPGAPKI 488
>gi|47570033|ref|ZP_00240694.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Bacillus cereus
G9241]
gi|47553285|gb|EAL11675.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Bacillus cereus
G9241]
Length = 451
Score = 216 bits (551), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 137/373 (36%), Positives = 200/373 (53%), Gaps = 21/373 (5%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
K F E GIS L G + T +QE + L GKD + +AKTGTGK++AF+LP +
Sbjct: 2 KNFLELGISETFNHTLRENGITEATPIQEQAIPVILSGKDIIGQAKTGTGKTLAFVLPIL 61
Query: 439 EAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
E + S + LI+ PTRELA QI E +L + I VL + GG
Sbjct: 62 EKIDPECSD--------VQALIVAPTRELALQITTEIKKMLVQREDINVLAIYGGQDVAQ 113
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
R+L+ + I+VATPGRLLDHI ++ + L L +VLDEAD +L GF D+E+I
Sbjct: 114 QLRKLKGN-THIVVATPGRLLDHIRRET---IDLSNLSTIVLDEADQMLYFGFLYDIEDI 169
Query: 559 VDCLPRRRQSLLFSATMPKELVLKREHTYID---TVGLGSVETPVK-IKQSCLVAPHELH 614
+D P +Q++LFSATMPK+ + K Y+D + + S E V I+Q +
Sbjct: 170 LDETPGSKQTMLFSATMPKD-IKKLAKRYMDEPQMIQVQSEEVTVNTIEQRVIETTDRAK 228
Query: 615 FQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRIS 674
L ++ + ++FC T + S LY L+ + N E++ PQ R+R+
Sbjct: 229 PDALRFVMDRD----QPFLAVIFCRTKVRASKLYDNLKGLGYNCAELHGDIPQAKRERVM 284
Query: 675 EEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLL 734
+ FR +K L+ +DV+ARG+D VT V IP D E YIHR+GRTGR G G +
Sbjct: 285 KSFREAKIQYLIATDVAARGLDVDGVTHVFNFDIPEDVESYIHRIGRTGRAGGSGIAITF 344
Query: 735 LAPWEEYFLDDLK 747
+A +E L++++
Sbjct: 345 VAAKDEKHLEEIE 357
>gi|406915896|gb|EKD54936.1| hypothetical protein ACD_60C00032G0020 [uncultured bacterium]
Length = 457
Score = 216 bits (551), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 136/358 (37%), Positives = 199/358 (55%), Gaps = 19/358 (5%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F E ++P KA+ A GY T VQ ++ L+GKD V A+TGTGK+ +F+LPA+
Sbjct: 3 FAEFNLNPHIFKAIDACGYKNPTPVQAKSIPEILQGKDVVASAQTGTGKTASFVLPALHR 62
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+ ST++ +LIL PTRELA+QI A+ + + +LVGG ++
Sbjct: 63 L------STSKASHKPRILILTPTRELATQITT-AVTKYGKFLRVNIASLVGGMPYRQQL 115
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
R L S P I+VATPGRLLDH+ N+ + L ++MLVLDEAD +LD+GF DV+ I
Sbjct: 116 RSL-SKPVDIIVATPGRLLDHMSNRR---LDLSAIEMLVLDEADRMLDMGFIDDVQEIAR 171
Query: 561 CLPRRRQSLLFSATMPKEL--VLKREHTYIDTVGLGSVE-TPVKIKQSCLVAPHELH-FQ 616
P RQ+LLFSAT+ K L ++ R + + + TPVKI Q +A + H +
Sbjct: 172 ATPASRQTLLFSATVDKRLSHIINRLLKNPVQINFSNEQLTPVKISQELYMADNPQHKMR 231
Query: 617 ILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEE 676
+L H +++ + +K I+F +T + L L ++ Q R+R E+
Sbjct: 232 LLLHFVQDKKM----FKAIIFSATKINADKLAGELSNQGYASAPLHGDLKQNVRNRTLEQ 287
Query: 677 FRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLL 734
R SK LV +DV+ARG+D D+T V+ +P E Y+HR+GRTGR GK G + L
Sbjct: 288 LRRSKIQFLVATDVAARGIDVEDITHVINYDLPKFSEDYVHRIGRTGRAGKSGTAISL 345
>gi|423575831|ref|ZP_17551950.1| hypothetical protein II9_03052 [Bacillus cereus MSX-D12]
gi|401209156|gb|EJR15916.1| hypothetical protein II9_03052 [Bacillus cereus MSX-D12]
Length = 454
Score = 216 bits (551), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 138/377 (36%), Positives = 203/377 (53%), Gaps = 21/377 (5%)
Query: 375 ILSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFL 434
+++ K F E GIS L G + T +QE + L GKD + +AKTGTGK++AF+
Sbjct: 1 MVNLKNFLELGISETFNHTLRENGITEATPIQEEAIPVILSGKDIIGQAKTGTGKTLAFV 60
Query: 435 LPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGT 494
LP +E + S + LI+ PTRELA QI E +L + I VL + GG
Sbjct: 61 LPILEKIDPECSD--------VQALIVAPTRELALQITTEIKKMLVQREDINVLAIYGGQ 112
Query: 495 RFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKD 554
R+L+ + I+VATPGRLLDHI ++ + L L +VLDEAD +L GF D
Sbjct: 113 DVAQQLRKLKGN-THIVVATPGRLLDHIRRET---IDLSNLTTIVLDEADQMLYFGFLYD 168
Query: 555 VENIVDCLPRRRQSLLFSATMPKELVLKREHTYID---TVGLGSVETPVK-IKQSCLVAP 610
+E+I+D P +Q++LFSATMPK+ + K Y+D V + S E V I+Q +
Sbjct: 169 IEDILDETPGSKQTMLFSATMPKD-IKKLAKRYMDEPQMVQVQSEEVTVNTIEQRVIETT 227
Query: 611 HELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYR 670
L ++ + ++FC T + S LY L+ + N E++ PQ R
Sbjct: 228 DRAKPDALRFVMDRD----QPFLAVIFCRTKVRASKLYDNLKGLGYNCAELHGDIPQAKR 283
Query: 671 DRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGE 730
+R+ + FR +K L+ +DV+ARG+D VT V IP D E YIHR+GRTGR G G
Sbjct: 284 ERVMKSFREAKIQYLIATDVAARGLDVDGVTHVFNYDIPEDVESYIHRIGRTGRAGGSGI 343
Query: 731 GVLLLAPWEEYFLDDLK 747
+ +A +E L++++
Sbjct: 344 AITFVAAKDEKHLEEIE 360
>gi|66911669|gb|AAH96848.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 18 [Danio rerio]
gi|182889788|gb|AAI65637.1| Ddx18 protein [Danio rerio]
Length = 653
Score = 216 bits (551), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 154/453 (33%), Positives = 252/453 (55%), Gaps = 37/453 (8%)
Query: 386 ISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKAT 445
+S T+K + G+ MT +Q T+ LEG+D + AKTG+GK++AFL+P+IE + K
Sbjct: 168 VSENTLKGVKEMGFDTMTEIQHKTIRPLLEGRDVLAAAKTGSGKTLAFLIPSIELIYK-- 225
Query: 446 SSSTTQLVP--PIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRL 503
+ +P V++L PTRELA Q L+ +H L ++GG+ + ++L
Sbjct: 226 ----LKFMPRNGTGVIVLSPTRELAMQTYGVLKELMTHHVHTYGL-IMGGSNRSAEAQKL 280
Query: 504 ESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLP 563
++ ILVATPGRLLDH++N G + L+ L++DEAD +L++GF ++++ I+ LP
Sbjct: 281 -ANGVNILVATPGRLLDHLQNTPGFMFK--NLQCLIIDEADRILEVGFEEELKQIIKLLP 337
Query: 564 RRRQSLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQI 617
++RQS+LFSAT ++ + LK+E Y+ T ++Q +V P E F +
Sbjct: 338 KKRQSMLFSATQTRKVEDLARISLKKEPLYVGVDDNKDTATVEGLEQGYVVCPSEKRFLL 397
Query: 618 LHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEF 677
L LK++ K++VF S+ M Y LL + + V ++ ++ Q R +F
Sbjct: 398 LFTFLKKN----RKKKLMVFFSSCMSVKFHYELLNYIDLPVMAIHGKQKQTKRTTTFFQF 453
Query: 678 RASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEG--VLLL 735
+ IL+ +DV+ARG+D P+V +VQ P D ++YIHR+GRT R G G G +L+L
Sbjct: 454 CNADSGILLCTDVAARGLDIPEVDWIVQFDPPDDPKEYIHRVGRTAR-GINGRGHALLIL 512
Query: 736 APWEEYFLDDLKD--LPLDKLQLPHLN-PEIQLQMDNHMAK---IDNNVKEAAYHAWLGY 789
P E FL LK +PL + + +IQ Q+D + K + + +E AY +++
Sbjct: 513 RPEELGFLRFLKQAKVPLSEFEFSWTKISDIQSQLDKLIEKNYYLHKSAQE-AYKSYVRA 571
Query: 790 YN--SIREIGRDKTTLVELANKFAQSIGLQRPP 820
Y+ S+++I +T ++L K A S G + PP
Sbjct: 572 YDSHSLKQIYNVET--LDLP-KVAMSFGFKVPP 601
>gi|448532819|ref|XP_003870508.1| Has1 protein [Candida orthopsilosis Co 90-125]
gi|380354863|emb|CCG24379.1| Has1 protein [Candida orthopsilosis]
Length = 573
Score = 216 bits (551), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 181/556 (32%), Positives = 292/556 (52%), Gaps = 58/556 (10%)
Query: 288 ESSSSDDDSDIDSEDVDEKVEGWRDVKKMGSSASLGKYDMKI--TKRVPLKSLEDEHDFE 345
+ S S+ D ++D+E ++++ D A L D+K K K EDE +
Sbjct: 28 DESESESDVEVDTEKAVDQLDDEFD-----EVAGLLGQDIKDPEEKEANKKQAEDEKRLQ 82
Query: 346 EQVELIRKEISKNKLNGNGEKKEKREEEPILSQKRFDECGISPLTIKALTAAGYIQMTRV 405
E ++K K+ + E K E+EP F++ S T+KA+ G+ +MT+V
Sbjct: 83 E--------LTKPKVVDSTETKGDDEDEP-EDNYSFEKAEFSEPTMKAIREMGFKKMTKV 133
Query: 406 QEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAV--LKATSSSTTQLVPPIYVLILCP 463
Q T+ L G+D + AKTG+GK++AFL+PAIE + LK + T V+I+ P
Sbjct: 134 QAKTIPPLLAGRDVLGAAKTGSGKTLAFLIPAIELLYSLKIKPRNGTA------VIIITP 187
Query: 464 TRELASQIAAEAIALLKNHD-GIGVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHI 522
TRELA QI A L+++H G++ +GG + + +L + +LVATPGRLLDH+
Sbjct: 188 TRELALQIFGVARQLMEHHSQTCGIV--IGGADRRQEATKL-AKGVNLLVATPGRLLDHL 244
Query: 523 ENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRR-RQSLLFSATMPKE--- 578
+N G LK L++DEAD +L++GF ++++ I+ LP RQ++LFSAT +
Sbjct: 245 KNTQGFV--FSNLKALIIDEADRILEIGFEEEMKQIIKILPNEDRQTMLFSATQTTKVED 302
Query: 579 ---LVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILHHLLKEHILGTPDYKVI 635
+ L+ YI+ V V T ++Q +V + F +L LK ++ K+I
Sbjct: 303 LARISLRPGPLYINVVPEKDVSTADGLEQGYVVCDSDKRFLLLFSFLKRNV----KKKII 358
Query: 636 VFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEFRASKRLILVTSDVSARGM 695
VF S+ LL + + V +++ ++ Q R EF +K+ ILV +DV+ARG+
Sbjct: 359 VFLSSCNSVKFYSELLNYIDLPVLDLHGKQKQQKRTNTFFEFCNAKQGILVCTDVAARGL 418
Query: 696 DYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEG--VLLLAPWEEYFLDDLK--DLPL 751
D P V ++Q P D YIHR+GRT R G +G+G ++ L P E FL LK ++PL
Sbjct: 419 DIPAVDWIIQFDPPDDPRDYIHRVGRTAR-GTQGKGKSLMFLTPSELGFLRYLKAANVPL 477
Query: 752 DKLQLP-HLNPEIQLQMDNHMAKIDNNVKEAA---YHAWLGYY--NSIREIGR-DKTTLV 804
++ + P + +Q Q+ + K + + ++A Y A+L Y +S++ + + DK LV
Sbjct: 478 NEYEFPTNKIANVQSQL-TKLIKTNYLLHQSAKDGYRAYLQAYASHSLKTVYQIDKLDLV 536
Query: 805 ELANKFAQSIGLQRPP 820
K +S G PP
Sbjct: 537 ----KVGKSFGFDVPP 548
>gi|228985558|ref|ZP_04145712.1| ATP-dependent RNA helicase [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|228774135|gb|EEM22547.1| ATP-dependent RNA helicase [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
Length = 454
Score = 216 bits (551), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 137/377 (36%), Positives = 203/377 (53%), Gaps = 21/377 (5%)
Query: 375 ILSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFL 434
+++ K F E GIS L G + T +QE + L GKD + +AKTGTGK++AF+
Sbjct: 1 MVNVKNFLELGISETFNHTLRENGITEATPIQEQAIPVILSGKDIIGQAKTGTGKTLAFV 60
Query: 435 LPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGT 494
LP +E + S + LI+ PTRELA QI E +L + I VL + GG
Sbjct: 61 LPILEKIDPECSD--------VQALIVAPTRELALQITTEIKKMLVQREDINVLAIYGGQ 112
Query: 495 RFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKD 554
R+L+ + I+VATPGRLLDHI ++ + L L +VLDEAD +L GF D
Sbjct: 113 DVAQQLRKLKGN-THIVVATPGRLLDHIRRET---IDLSNLTTIVLDEADQMLYFGFLYD 168
Query: 555 VENIVDCLPRRRQSLLFSATMPKELVLKREHTYID---TVGLGSVETPVK-IKQSCLVAP 610
+E+I+D P +Q++LFSATMPK+ + K Y+D + + S E V I+Q +
Sbjct: 169 IEDILDETPGSKQTMLFSATMPKD-IKKLAKRYMDEPQMIQVQSEEVTVNTIEQRVIETT 227
Query: 611 HELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYR 670
L ++ + ++FC T + S LY L+ + N E++ PQ R
Sbjct: 228 DRAKPDALRFVMDRD----QPFLAVIFCRTKVRASKLYDNLKGLGYNCAELHGDIPQAKR 283
Query: 671 DRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGE 730
+R+ + FR +K L+ +DV+ARG+D VT V IP D E YIHR+GRTGR G G
Sbjct: 284 ERVMKSFREAKIQYLIATDVAARGLDVDGVTHVFNYDIPEDVESYIHRIGRTGRAGGSGL 343
Query: 731 GVLLLAPWEEYFLDDLK 747
+ +A +E L++++
Sbjct: 344 AITFVAAKDEKHLEEIE 360
>gi|30020539|ref|NP_832170.1| ATP-dependent RNA helicase [Bacillus cereus ATCC 14579]
gi|229127843|ref|ZP_04256829.1| ATP-dependent RNA helicase [Bacillus cereus BDRD-Cer4]
gi|29896090|gb|AAP09371.1| ATP-dependent RNA helicase [Bacillus cereus ATCC 14579]
gi|228655608|gb|EEL11460.1| ATP-dependent RNA helicase [Bacillus cereus BDRD-Cer4]
Length = 458
Score = 216 bits (551), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 137/383 (35%), Positives = 200/383 (52%), Gaps = 41/383 (10%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
K F E GIS L G + T +QE + L GKD + +AKTGTGK++AF+LP +
Sbjct: 5 KNFLELGISETFNHTLRENGITEATPIQEKAIPVILSGKDIIGQAKTGTGKTLAFVLPIL 64
Query: 439 EAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
E + S + LI+ PTRELA QI E +L + I VL + GG
Sbjct: 65 EKIDPECSD--------VQALIVAPTRELALQITTEIKKMLVQREDINVLAIYGGQDVAQ 116
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
R+L+ + I+VATPGRLLDHI ++ + L L +VLDEAD +L GF D+E+I
Sbjct: 117 QLRKLKGN-THIVVATPGRLLDHIRRET---IDLSNLSTIVLDEADQMLYFGFLYDIEDI 172
Query: 559 VDCLPRRRQSLLFSATMPKEL--------------VLKREHTYIDTVGLGSVETPVKIKQ 604
+D P +Q++LFSATMPK++ ++ E +DT+ +ET + K
Sbjct: 173 LDETPGSKQTMLFSATMPKDIKKLAKRYMDEPQMIQVQSEEVTVDTIEQRVIETTDRAK- 231
Query: 605 SCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSR 664
P L F + + ++FC T + S LY L+ + N E++
Sbjct: 232 -----PDALRFVMDRD---------QPFLAVIFCRTKVRASKLYDNLKGLGYNCAELHGD 277
Query: 665 KPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGR 724
PQ R+R+ + FR +K L+ +DV+ARG+D VT V IP D E YIHR+GRTGR
Sbjct: 278 IPQAKRERVMKSFREAKIQYLIATDVAARGLDVDGVTHVFNYDIPEDVESYIHRIGRTGR 337
Query: 725 EGKEGEGVLLLAPWEEYFLDDLK 747
G G + +A +E L++++
Sbjct: 338 AGGSGLAITFVAAKDEKHLEEIE 360
>gi|423396915|ref|ZP_17374116.1| hypothetical protein ICU_02609 [Bacillus cereus BAG2X1-1]
gi|401651491|gb|EJS69056.1| hypothetical protein ICU_02609 [Bacillus cereus BAG2X1-1]
Length = 454
Score = 216 bits (551), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 136/383 (35%), Positives = 201/383 (52%), Gaps = 41/383 (10%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
K F E GIS L G + T +QE + + GKD + +AKTGTGK++AF+LP +
Sbjct: 5 KNFLELGISETFNHTLRENGITEATPIQEKAIPVIMSGKDIIGQAKTGTGKTLAFVLPIL 64
Query: 439 EAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
E + +S + LI+ PTRELA QI E +L + I VL + GG
Sbjct: 65 EKIDPESSD--------VQALIVAPTRELALQITTEIKKMLVQREDINVLAIYGGQDVAQ 116
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
R+L+ + I+VATPGRLLDHI ++ + L L +VLDEAD +L GF D+E+I
Sbjct: 117 QLRKLKGN-THIVVATPGRLLDHIRRET---IDLSNLSTIVLDEADQMLYFGFLYDIEDI 172
Query: 559 VDCLPRRRQSLLFSATMPKEL--------------VLKREHTYIDTVGLGSVETPVKIKQ 604
+D P +Q++LFSATMPK++ ++ E +DT+ +ET + K
Sbjct: 173 LDETPGSKQTMLFSATMPKDIKKLAKRYMDEPQMIQVQSEEVTVDTIEQRVIETTDRAK- 231
Query: 605 SCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSR 664
P L F + + ++FC T + S LY L+ + N E++
Sbjct: 232 -----PDALRFVMDRD---------QPFLAVIFCRTKVRASKLYDNLKGLGYNCAELHGD 277
Query: 665 KPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGR 724
PQ R+R+ + FR +K L+ +DV+ARG+D VT V IP D E YIHR+GRTGR
Sbjct: 278 IPQAKRERVMKSFREAKIQYLIATDVAARGLDVDGVTHVFNFDIPEDVESYIHRIGRTGR 337
Query: 725 EGKEGEGVLLLAPWEEYFLDDLK 747
G G + +A +E L++++
Sbjct: 338 AGGSGIAITFVAAKDEKHLEEIE 360
>gi|308178183|ref|YP_003917589.1| ATP-dependent RNA helicase [Arthrobacter arilaitensis Re117]
gi|307745646|emb|CBT76618.1| putative ATP-dependent RNA helicase [Arthrobacter arilaitensis
Re117]
Length = 642
Score = 216 bits (551), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 153/456 (33%), Positives = 231/456 (50%), Gaps = 39/456 (8%)
Query: 363 NGEKKEKREEEPILSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVK 422
N + + EE +L F E G+ + +L GY + + +Q AT+ LEG+D V
Sbjct: 8 NTDDNQTPEEPTVL----FSELGLDARVLASLADLGYEKPSPIQAATIPLLLEGRDVVGL 63
Query: 423 AKTGTGKSIAFLLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNH 482
A+TGTGK+ AF LPA+ + + ++ P I L+L PTRELA Q+A + K
Sbjct: 64 AQTGTGKTAAFALPALSRMAELADTNGPAKTPQI--LVLAPTRELALQVAEAFTSYAKYL 121
Query: 483 DGIGVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDE 542
VL + GG+ + L Q++V TPGR++DHI NK L L L+ +VLDE
Sbjct: 122 PNFTVLPVYGGSPYGPQLNGLRRG-AQVVVGTPGRVIDHI-NKGSLD--LSNLQYVVLDE 177
Query: 543 ADHLLDLGFRKDVENIVDCLPRRRQSLLFSATMPKELVLKREHTYIDTVGLGSVETPVKI 602
AD +L +GF ++V+ I++ P +Q LFSATMP+ + + Y+ E VK
Sbjct: 178 ADEMLRMGFAEEVDKILEATPEDKQVALFSATMPRT-IRRIASEYLRN----PQEVAVKS 232
Query: 603 KQSCLVAPHELHFQIL--HHL-LKEHILGTPDYK-VIVFCSTGMVTSLLYLLLREMKMNV 658
KQS + + Q++ H L IL + ++ VI F T M T L L+
Sbjct: 233 KQSTGTNITQRYLQVMGAHKLDAMTRILESETFEGVIAFVRTKMATEDLADKLKARGFTA 292
Query: 659 REMYSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHR 718
+ PQ R+R E R+ K ILV +DV+ARG+D ++ VV IP D E Y+HR
Sbjct: 293 AAINGDIPQQQRERTIENLRSGKIDILVATDVAARGLDVERISHVVNFDIPHDTESYVHR 352
Query: 719 LGRTGREGKEGEGVLLLAPWEEYFLDDLKDL---PLDKLQLPHLNPEIQLQMDNHMAKID 775
+GRTGR G++G+ +L + P E+Y L ++ P+ ++QLP L+ ++ +ID
Sbjct: 353 IGRTGRAGRKGDAILFMTPREKYLLRAIEKATRQPVTQMQLPSLDSVNDRRIQKFTDRID 412
Query: 776 NNVKEAAYHAWLGYYNSIREIGRDKTTLVELANKFA 811
+ G+D TT E+ KFA
Sbjct: 413 KTIS-----------------GQDLTTFREIVEKFA 431
>gi|384186458|ref|YP_005572354.1| ATP-dependent RNA helicase [Bacillus thuringiensis serovar
chinensis CT-43]
gi|326940167|gb|AEA16063.1| ATP-dependent RNA helicase [Bacillus thuringiensis serovar
chinensis CT-43]
Length = 455
Score = 216 bits (551), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 136/383 (35%), Positives = 200/383 (52%), Gaps = 41/383 (10%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
K F E GIS L G + T +QE + + GKD + +AKTGTGK++AF+LP +
Sbjct: 2 KNFLELGISETFNHTLRENGITEATPIQEKAIPVIMSGKDIIGQAKTGTGKTLAFVLPIL 61
Query: 439 EAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
E + S + LI+ PTRELA QI E +L + I VL + GG
Sbjct: 62 EKIDPECSD--------VQALIVAPTRELALQITTEIKKMLVQREDINVLAIYGGQDVAQ 113
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
R+L+ + I+VATPGRLLDHI ++ + L L +VLDEAD +L GF D+E+I
Sbjct: 114 QLRKLKGN-THIVVATPGRLLDHIRRET---IDLSNLSTIVLDEADQMLYFGFLYDIEDI 169
Query: 559 VDCLPRRRQSLLFSATMPKEL--------------VLKREHTYIDTVGLGSVETPVKIKQ 604
+D P +Q++LFSATMPK++ ++ E +DT+ +ET + K
Sbjct: 170 LDETPGSKQTMLFSATMPKDIKKLAKRYMDEPQMIQVQSEEVTVDTIEQRVIETTDRAK- 228
Query: 605 SCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSR 664
P L F + + ++FC T + S LY L+ + N E++
Sbjct: 229 -----PDALRFVMDRD---------QPFLAVIFCRTKVRASKLYDNLKGLGYNCAELHGD 274
Query: 665 KPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGR 724
PQ R+R+ + FR +K L+ +DV+ARG+D VT V IP D E YIHR+GRTGR
Sbjct: 275 IPQAKRERVMKSFREAKIQYLIATDVAARGLDVDGVTHVFNFDIPEDVESYIHRIGRTGR 334
Query: 725 EGKEGEGVLLLAPWEEYFLDDLK 747
G G + +A +E L++++
Sbjct: 335 AGGSGLAITFVAAKDEKHLEEIE 357
>gi|51010913|ref|NP_001003411.1| ATP-dependent RNA helicase DDX18 [Danio rerio]
gi|49618963|gb|AAT68066.1| myc-regulated DEAD/H box 18 RNA helicase [Danio rerio]
Length = 653
Score = 216 bits (550), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 154/453 (33%), Positives = 252/453 (55%), Gaps = 37/453 (8%)
Query: 386 ISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKAT 445
+S T+K + G+ MT +Q T+ LEG+D + AKTG+GK++AFL+P+IE + K
Sbjct: 168 VSENTLKGVKEMGFDTMTEIQHKTIRPLLEGRDVLAAAKTGSGKTLAFLIPSIELIYK-- 225
Query: 446 SSSTTQLVP--PIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRL 503
+ +P V++L PTRELA Q L+ +H L ++GG+ + ++L
Sbjct: 226 ----LKFMPRNGTGVIVLSPTRELAMQTYGVLKELMTHHVHTYGL-IMGGSNRSAEAQKL 280
Query: 504 ESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLP 563
++ ILVATPGRLLDH++N G + L+ L++DEAD +L++GF ++++ I+ LP
Sbjct: 281 -ANGVNILVATPGRLLDHLQNTPGFMFK--NLQCLIIDEADRILEVGFEEELKQIIKLLP 337
Query: 564 RRRQSLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQI 617
++RQS+LFSAT ++ + LK+E Y+ T ++Q +V P E F +
Sbjct: 338 KKRQSMLFSATQTRKVEDLARISLKKEPLYVGVDDNKDTATVEGLEQGYVVCPSEKRFLL 397
Query: 618 LHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEF 677
L LK++ K++VF S+ M Y LL + + V ++ ++ Q R +F
Sbjct: 398 LFTFLKKN----RKKKLMVFFSSCMSVKFHYELLNYIDLPVMAIHGKQKQTKRTTTFFQF 453
Query: 678 RASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEG--VLLL 735
+ IL+ +DV+ARG+D P+V +VQ P D ++YIHR+GRT R G G G +L+L
Sbjct: 454 CNADSGILLCTDVAARGLDIPEVDWIVQFDPPDDPKEYIHRVGRTAR-GINGRGHALLIL 512
Query: 736 APWEEYFLDDLKD--LPLDKLQLPHLN-PEIQLQMDNHMAK---IDNNVKEAAYHAWLGY 789
P E FL LK +PL + + +IQ Q+D + K + + +E AY +++
Sbjct: 513 RPEELGFLRFLKQAKVPLSEFEFSWTKISDIQSQLDKLIEKNYYLHKSAQE-AYKSYVRA 571
Query: 790 YN--SIREIGRDKTTLVELANKFAQSIGLQRPP 820
Y+ S+++I +T ++L K A S G + PP
Sbjct: 572 YDSHSLKQIYNVET--LDLP-KVAMSFGFKVPP 601
>gi|432853428|ref|XP_004067702.1| PREDICTED: probable ATP-dependent RNA helicase DDX10-like [Oryzias
latipes]
Length = 834
Score = 216 bits (550), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 168/478 (35%), Positives = 252/478 (52%), Gaps = 38/478 (7%)
Query: 369 KREEEPILSQ-KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGT 427
+R E+ LSQ RF + IS T+ L A + Q T +Q T+ L G+D + AKTG+
Sbjct: 64 RRYEDVDLSQVARFSDFPISKKTLLGLQEAQFRQPTEIQRQTIGLALRGRDVLGAAKTGS 123
Query: 428 GKSIAFLLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGV 487
GK++AFL+P +E + + SS L LI+ PTRELA Q + KNH+
Sbjct: 124 GKTLAFLIPVLECLYRHQWSSMDGL----GALIISPTRELAYQTFEVLRKVGKNHEFSAG 179
Query: 488 LTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLL 547
L ++GG K + R+ I+V TPGRLL H++ + GL MLVLDEAD +L
Sbjct: 180 L-VIGGKDLKTEAERIPR--TNIVVCTPGRLLQHMDQTACFHA--SGLLMLVLDEADRIL 234
Query: 548 DLGFRKDVENIVDCLPRRRQSLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVK 601
D+GF + IV+ LPR RQ+LLFSAT K L LK + Y+ TP
Sbjct: 235 DMGFADTLNAIVENLPRTRQTLLFSATQTKSVKDLARLSLK-DPEYVWVHDKARFSTPAS 293
Query: 602 IKQSCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK--MNVR 659
++QS +V ELH ++ LL I G K+IVF + L+ + ++ M V
Sbjct: 294 LEQSYVVC--ELHQKV--DLLFSFIRGHLTKKIIVFFACCKQVQYLFRVFCRLRPGMPVL 349
Query: 660 EMYSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRL 719
++ R+PQ+ R + +F + +L +D++ARG+D+P V V+Q P D + YIHR+
Sbjct: 350 ALHGRQPQVKRVEVYNDFVRKQNAVLFATDIAARGLDFPAVNWVLQFDCPEDADTYIHRV 409
Query: 720 GRTGREGKEGEGVLLLAPWE-EYFLDDL--KDLPLDKLQLPHLNPE----IQLQMDNHMA 772
GRT R + GE +LLL P E E + L K +P++++Q +NPE IQ +++ +A
Sbjct: 410 GRTARYKEGGEALLLLLPSEAEAMVAQLQEKKVPINQIQ---VNPEKLQSIQQKLEAFLA 466
Query: 773 KIDNNVKEAAYHAWLGYYNSIREIGRDKTTLVEL--ANKFAQSIGLQRPPPL--FRKT 826
+ + KE A ++ Y S+ + V N++A S+GL P + RKT
Sbjct: 467 Q-EKEQKERAQRCFVSYLRSVHLMKNKAVFDVSKLNINQYAHSLGLAVAPRVRFLRKT 523
>gi|423551771|ref|ZP_17528098.1| hypothetical protein IGW_02402 [Bacillus cereus ISP3191]
gi|401187609|gb|EJQ94682.1| hypothetical protein IGW_02402 [Bacillus cereus ISP3191]
Length = 454
Score = 216 bits (550), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 135/372 (36%), Positives = 200/372 (53%), Gaps = 19/372 (5%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
K F E GIS L G + T +QE + L GKD + +AKTGTGK++AF+LP +
Sbjct: 5 KNFLELGISETFNHTLRENGITEATPIQEKAIPVILSGKDIIGQAKTGTGKTLAFVLPIL 64
Query: 439 EAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
E + +S + LI+ PTRELA QI E +L + + VL + GG
Sbjct: 65 EKIDPESSD--------VQALIVAPTRELALQITTEIKKMLVQREDMNVLAIYGGQDVAQ 116
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
R+L+ + I+VATPGRLLDHI ++ + L L +VLDEAD +L GF D+E+I
Sbjct: 117 QLRKLKGN-THIVVATPGRLLDHIRRET---IDLSNLSTIVLDEADQMLYFGFLYDIEDI 172
Query: 559 VDCLPRRRQSLLFSATMPKEL--VLKREHTYIDTVGLGSVETPVK-IKQSCLVAPHELHF 615
+D P +Q++LFSATMPK++ + KR + + S E V I+Q +
Sbjct: 173 LDETPGSKQTMLFSATMPKDIKKLAKRYMDEPQMIQVQSEEVTVNTIEQRVIETTDRAKP 232
Query: 616 QILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISE 675
L ++ + ++FC T + S LY L+ + N E++ PQ R+R+ +
Sbjct: 233 DALRFVMDRD----QPFLAVIFCRTKVRASKLYDNLKGLGYNCAELHGDIPQAKRERVMK 288
Query: 676 EFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLL 735
FR +K L+ +DV+ARG+D VT V IP D E YIHR+GRTGR G G + +
Sbjct: 289 SFREAKIQYLIATDVAARGLDVDGVTHVFNYDIPEDVESYIHRIGRTGRAGGSGLAITFV 348
Query: 736 APWEEYFLDDLK 747
A +E L++++
Sbjct: 349 AAKDEKHLEEIE 360
>gi|6322427|ref|NP_012501.1| Hca4p [Saccharomyces cerevisiae S288c]
gi|1170186|sp|P20448.2|DBP4_YEAST RecName: Full=ATP-dependent RNA helicase HCA4; AltName: Full=DEAD
box protein 4; AltName: Full=Helicase CA4; AltName:
Full=Helicase UF1
gi|1008155|emb|CAA89324.1| HCA4 [Saccharomyces cerevisiae]
gi|285812868|tpg|DAA08766.1| TPA: Hca4p [Saccharomyces cerevisiae S288c]
gi|392298402|gb|EIW09499.1| Hca4p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 770
Score = 216 bits (550), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 163/490 (33%), Positives = 253/490 (51%), Gaps = 44/490 (8%)
Query: 375 ILSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFL 434
I K F + IS T+K L + +I++T +Q ++ L+G D + AKTG+GK++AFL
Sbjct: 37 ITKAKFFKDLPISDPTLKGLRESSFIKLTEIQADSIPVSLQGHDVLAAAKTGSGKTLAFL 96
Query: 435 LPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGT 494
+P IE + + + L LI+ PTRELA QI E + + +H ++GG
Sbjct: 97 VPVIEKLYREKWTEFDGL----GALIISPTRELAMQIY-EVLTKIGSHTSFSAGLVIGGK 151
Query: 495 RFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKD 554
K + R+ IL+ TPGR+L H++ GL+ L+MLVLDEAD LD+GF+K
Sbjct: 152 DVKFELERISR--INILIGTPGRILQHLDQAVGLNTS--NLQMLVLDEADRCLDMGFKKT 207
Query: 555 VENIVDCLPRRRQSLLFSATMPKEL--VLKREHTYIDTVGL-----GSV----ETPVKIK 603
++ IV L RQ+LLFSAT + + + + T TVG GSV TP ++
Sbjct: 208 LDAIVSTLSPSRQTLLFSATQSQSVADLARLSLTDYKTVGTHDVMDGSVNKEASTPETLQ 267
Query: 604 QSCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK--MNVREM 661
Q + P IL +K H+ K+IVF S+ +Y R+M+ +++ +
Sbjct: 268 QFYIEVPLADKLDILFSFIKSHL----KCKMIVFLSSSKQVHFVYETFRKMQPGISLMHL 323
Query: 662 YSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGR 721
+ R+ Q R ++F ++++ L +DV ARG+D+P V VVQV P D + YIHR+GR
Sbjct: 324 HGRQKQRARTETLDKFNRAQQVCLFATDVVARGIDFPAVDWVVQVDCPEDVDTYIHRVGR 383
Query: 722 TGREGKEGEGVLLLAPWEEYFLDDLKDLPLDKLQLPHLNPEIQL------QMDNHMAKID 775
R GK+G+ +++L P E+ LK L K++ LN + Q+ + + K D
Sbjct: 384 CARYGKKGKSLIMLTPQEQEAF--LKRLNARKIEPGKLNIKQSKKKSIKPQLQSLLFK-D 440
Query: 776 NNVKEAAYHAWLGYYNSIREIGRDKTTLV--EL-ANKFAQSIGLQRPPPLFRKTALKMGL 832
+K A++ Y SI + +DK EL +FA S+GL P + K G+
Sbjct: 441 PELKYLGQKAFISYVRSIY-VQKDKQVFKFDELPTEEFAYSLGLPGAPKIKMK-----GM 494
Query: 833 KDIPGIRLRK 842
K I + RK
Sbjct: 495 KTIEQAKERK 504
>gi|378754348|gb|EHY64382.1| hypothetical protein NERG_02553 [Nematocida sp. 1 ERTm2]
Length = 445
Score = 216 bits (550), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 154/434 (35%), Positives = 237/434 (54%), Gaps = 35/434 (8%)
Query: 401 QMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLVPPIYVLI 460
++T +Q+ + +EG+D + A TG+GK+++FL+PA E ++ T + VL+
Sbjct: 27 KLTEIQQKAIPYAMEGRDLLGIANTGSGKTLSFLIPAAEKLILEKEVKTPK------VLV 80
Query: 461 LCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLD 520
+ PTRELA Q + A L +H I + VGGT+ K D+ C ILV TPGRLLD
Sbjct: 81 ISPTRELAMQTSRVAQRLFADHPDIRTVLFVGGTK-KADENEQLKKGCAILVCTPGRLLD 139
Query: 521 HIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQSLLFSATMPKELV 580
H+ KSGLS++ +++ VLDE+D +LD+GF KD+ I+ LP++RQ+L+FSAT ++
Sbjct: 140 HL--KSGLSLK--KIEIAVLDESDRILDIGFEKDMCEILTYLPKKRQTLMFSATNTDNVL 195
Query: 581 ----LKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILHHLLKEHILGTPDYKVIV 636
L + + + V + T +KQS +V P + F +L LK D KVIV
Sbjct: 196 CRSWLSKRYKKVQ-VKIDDKITAAGLKQSFVVCPEDKRFSLLFSFLKR-----TDEKVIV 249
Query: 637 F---CSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEFRASKRLILVTSDVSAR 693
F CS+ M L+ LL + ++S Q R R+ +EF K +L ++DV+AR
Sbjct: 250 FFSTCSSVMFHGELFSLL---GFSAGVLHSGVKQDRRARVFDEFCEGKIKVLFSTDVAAR 306
Query: 694 GMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLAPWEEYFLDDLKDLPLDK 753
G+D P+V +VQ P D ++YIHR+GRT R G GE ++ L P E+ F+ LK L ++
Sbjct: 307 GLDIPNVRWIVQYDPPTDPKEYIHRVGRTARAGAFGEALMFLLPHEKIFIKYLKHLGVEV 366
Query: 754 LQLPHLNPEIQLQMDNHMAKIDNN--VKEAAYHAWLGYYNSIREIGRDKT---TLVELAN 808
+L P Q D ++ I N +++ A A GY + K + +EL N
Sbjct: 367 DELTFKEP--QDITDYYIKTISANYYLEKGAKEALRGYLQAYAGHKLKKVFDASKIEL-N 423
Query: 809 KFAQSIGLQRPPPL 822
K ++S GL P +
Sbjct: 424 KISKSFGLASMPKI 437
>gi|346319733|gb|EGX89334.1| ATP-dependent RNA helicase DBP4 [Cordyceps militaris CM01]
Length = 812
Score = 216 bits (550), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 151/473 (31%), Positives = 246/473 (52%), Gaps = 34/473 (7%)
Query: 370 REEEPILSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGK 429
RE +P + F E +S T K L+A+ + +T VQ + L+GKD + AKTG+GK
Sbjct: 42 RELDPKADLENFSELPLSRATAKGLSASHFQTLTDVQARAIPLALQGKDILGAAKTGSGK 101
Query: 430 SIAFLLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLT 489
++AFL+P +E + +A + L L+L PTRELA QI E + + +
Sbjct: 102 TLAFLVPLLEKLHRAQWTEYDGL----GALVLSPTRELAVQIY-EVLRKIGRYHSFSAGL 156
Query: 490 LVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDL 549
++GG K + RL IL+ TPGR+L H++ +G L++LVLDEAD ++D+
Sbjct: 157 VIGGKNLKEEAERLTR--MNILICTPGRMLQHLDQTAGFDAN--NLQLLVLDEADRIMDM 212
Query: 550 GFRKDVENIVDCLPRRRQSLLFSATMPKEL-----VLKREHTYIDTVGLGSVETPVKIKQ 604
GF+ DV+ +V+ LP+ RQ+L+FSAT K++ + ++ Y+ TP ++Q
Sbjct: 213 GFQADVDALVEHLPKERQTLMFSATQSKKVSDLARLSLKDPEYVSVHEAAISATPTNLQQ 272
Query: 605 SCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK--MNVREMY 662
+V P L +K + K+IVF S+G +Y R ++ + + ++
Sbjct: 273 HYIVTPLHEKLDTLFGFIKASL----KSKIIVFLSSGKQVRFVYESFRHLQPGIPLLHLH 328
Query: 663 SRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRT 722
R+ Q+ R I+ FRA+K L +DV ARG+D+P V V+QV P D + YIHR+GRT
Sbjct: 329 GRQKQVQRLEITNRFRAAKEACLFATDVVARGIDFPAVHWVIQVDCPEDTDTYIHRVGRT 388
Query: 723 GREGKEGEGVLLLAPWEEYFLDDLKDLPLDKLQLPHLNPEIQLQMD-----NHMAKIDNN 777
R + G VL L EE + +K L K+ + +N + Q + M + +
Sbjct: 389 ARFERNGRAVLFLETSEEAGM--IKKLEQKKIPIQMINIKEQKKRSVKNDLQSMCFQNPD 446
Query: 778 VKEAAYHAWLGYYNSIREIGRDKTTL----VELANKFAQSIGLQRPPPL-FRK 825
+K +++ Y SI + +DK ++L + +A S+GL P + F+K
Sbjct: 447 LKYLGQKSFISYTRSI-HLQKDKEVFNLKKLDL-DAYASSLGLPGTPQIKFQK 497
>gi|160380619|sp|A6ZPU3.1|DBP4_YEAS7 RecName: Full=ATP-dependent RNA helicase DBP4; AltName: Full=DEAD
box protein 4; AltName: Full=Helicase CA4; AltName:
Full=Helicase UF1
gi|151945052|gb|EDN63303.1| helicase CA [Saccharomyces cerevisiae YJM789]
gi|349579165|dbj|GAA24328.1| K7_Hca4p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 770
Score = 216 bits (550), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 163/490 (33%), Positives = 253/490 (51%), Gaps = 44/490 (8%)
Query: 375 ILSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFL 434
I K F + IS T+K L + +I++T +Q ++ L+G D + AKTG+GK++AFL
Sbjct: 37 ITKAKFFKDLPISDPTLKGLRESSFIKLTEIQADSIPVSLQGHDVLAAAKTGSGKTLAFL 96
Query: 435 LPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGT 494
+P IE + + + L LI+ PTRELA QI E + + +H ++GG
Sbjct: 97 VPVIEKLYREKWTEFDGL----GALIISPTRELAMQIY-EVLTKIGSHTSFSAGLVIGGK 151
Query: 495 RFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKD 554
K + R+ IL+ TPGR+L H++ GL+ L+MLVLDEAD LD+GF+K
Sbjct: 152 DVKFELERISR--INILIGTPGRILQHLDQAVGLNTS--NLQMLVLDEADRCLDMGFKKT 207
Query: 555 VENIVDCLPRRRQSLLFSATMPKEL--VLKREHTYIDTVGL-----GSV----ETPVKIK 603
++ IV L RQ+LLFSAT + + + + T TVG GSV TP ++
Sbjct: 208 LDAIVSTLSPSRQTLLFSATQSQSVADLARLSLTDYKTVGTHDVMDGSVNKEASTPETLQ 267
Query: 604 QSCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK--MNVREM 661
Q + P IL +K H+ K+IVF S+ +Y R+M+ +++ +
Sbjct: 268 QFYIEVPLADKLDILFSFIKSHL----KCKMIVFLSSSKQVHFVYETFRKMQPGISLMHL 323
Query: 662 YSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGR 721
+ R+ Q R ++F ++++ L +DV ARG+D+P V VVQV P D + YIHR+GR
Sbjct: 324 HGRQKQRARTETLDKFNRAQQVCLFATDVVARGIDFPAVDWVVQVDCPEDVDTYIHRVGR 383
Query: 722 TGREGKEGEGVLLLAPWEEYFLDDLKDLPLDKLQLPHLNPEIQL------QMDNHMAKID 775
R GK+G+ +++L P E+ LK L K++ LN + Q+ + + K D
Sbjct: 384 CARYGKKGKSLIMLTPQEQEAF--LKRLNARKIEPGKLNIKQSKKKSIKPQLQSLLFK-D 440
Query: 776 NNVKEAAYHAWLGYYNSIREIGRDKTTLV--EL-ANKFAQSIGLQRPPPLFRKTALKMGL 832
+K A++ Y SI + +DK EL +FA S+GL P + K G+
Sbjct: 441 PELKYLGQKAFISYVRSIY-VQKDKQVFKFDELPTEEFAYSLGLPGAPKIKMK-----GM 494
Query: 833 KDIPGIRLRK 842
K I + RK
Sbjct: 495 KTIEQAKERK 504
>gi|229109888|ref|ZP_04239470.1| ATP-dependent RNA helicase [Bacillus cereus Rock1-15]
gi|228673542|gb|EEL28804.1| ATP-dependent RNA helicase [Bacillus cereus Rock1-15]
Length = 458
Score = 216 bits (550), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 137/383 (35%), Positives = 200/383 (52%), Gaps = 41/383 (10%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
K F E GIS L G + T +QE + L GKD + +AKTGTGK++AF+LP +
Sbjct: 5 KNFLELGISETFNHTLRENGITEATPIQEKAIPFILSGKDIIGQAKTGTGKTLAFVLPIL 64
Query: 439 EAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
E + S + LI+ PTRELA QI E +L + I VL + GG
Sbjct: 65 EKIDPECSD--------VQALIVAPTRELALQITTEIKKMLVQREDINVLAIYGGQDVAQ 116
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
R+L+ + I+VATPGRLLDHI ++ + L L +VLDEAD +L GF D+E+I
Sbjct: 117 QLRKLKGN-THIVVATPGRLLDHIRRET---IDLSNLSTIVLDEADQMLYFGFLYDIEDI 172
Query: 559 VDCLPRRRQSLLFSATMPKEL--------------VLKREHTYIDTVGLGSVETPVKIKQ 604
+D P +Q++LFSATMPK++ ++ E +DT+ +ET + K
Sbjct: 173 LDETPGSKQTMLFSATMPKDIKKLAKRYMDEPQMIQVQSEEVTVDTIEQRVIETTDRAK- 231
Query: 605 SCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSR 664
P L F + + ++FC T + S LY L+ + N E++
Sbjct: 232 -----PDALRFVMDRD---------QPFLAVIFCRTKVRASKLYDNLKGLGYNCAELHGD 277
Query: 665 KPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGR 724
PQ R+R+ + FR +K L+ +DV+ARG+D VT V IP D E YIHR+GRTGR
Sbjct: 278 IPQAKRERVMKSFREAKIQYLIATDVAARGLDVDGVTHVFNFDIPEDVESYIHRIGRTGR 337
Query: 725 EGKEGEGVLLLAPWEEYFLDDLK 747
G G + +A +E L++++
Sbjct: 338 AGGSGLAITFVAAKDEKHLEEIE 360
>gi|51013687|gb|AAT93137.1| YJL033W [Saccharomyces cerevisiae]
Length = 770
Score = 216 bits (550), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 163/490 (33%), Positives = 253/490 (51%), Gaps = 44/490 (8%)
Query: 375 ILSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFL 434
I K F + IS T+K L + +I++T +Q ++ L+G D + AKTG+GK++AFL
Sbjct: 37 ITKAKFFKDLPISDPTLKGLRESSFIKLTEIQADSIPVSLQGHDVLAAAKTGSGKTLAFL 96
Query: 435 LPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGT 494
+P IE + + + L LI+ PTRELA QI E + + +H ++GG
Sbjct: 97 VPVIEKLYREKWTEFDGL----GALIISPTRELAMQIY-EVLTKIGSHTSFSAGLVIGGK 151
Query: 495 RFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKD 554
K + R+ IL+ TPGR+L H++ GL+ L+MLVLDEAD LD+GF+K
Sbjct: 152 DVKFELERISR--INILIGTPGRILQHLDQAVGLNTS--NLQMLVLDEADRCLDMGFKKT 207
Query: 555 VENIVDCLPRRRQSLLFSATMPKEL--VLKREHTYIDTVGL-----GSV----ETPVKIK 603
++ IV L RQ+LLFSAT + + + + T TVG GSV TP ++
Sbjct: 208 LDAIVSTLSPSRQTLLFSATQSQSVADLARLSLTDYKTVGTHDVMDGSVNKEASTPETLQ 267
Query: 604 QSCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK--MNVREM 661
Q + P IL +K H+ K+IVF S+ +Y R+M+ +++ +
Sbjct: 268 QFYIEVPLADKLDILFSFIKSHL----KCKMIVFLSSSKQVHFVYETFRKMQPGISLMHL 323
Query: 662 YSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGR 721
+ R+ Q R ++F ++++ L +DV ARG+D+P V VVQV P D + YIHR+GR
Sbjct: 324 HGRQKQRARTETLDKFNRAQQVCLFATDVVARGIDFPAVDWVVQVDCPEDVDTYIHRVGR 383
Query: 722 TGREGKEGEGVLLLAPWEEYFLDDLKDLPLDKLQLPHLNPEIQL------QMDNHMAKID 775
R GK+G+ +++L P E+ LK L K++ LN + Q+ + + K D
Sbjct: 384 CARYGKKGKSLIMLTPQEQEAF--LKRLNARKIEPGKLNIKQSKKKSIKPQLQSLLFK-D 440
Query: 776 NNVKEAAYHAWLGYYNSIREIGRDKTTLV--EL-ANKFAQSIGLQRPPPLFRKTALKMGL 832
+K A++ Y SI + +DK EL +FA S+GL P + K G+
Sbjct: 441 PELKYLGQKAFISYVRSIY-VQKDKQVFKFDELPTEEFAYSLGLPGAPKIKMK-----GM 494
Query: 833 KDIPGIRLRK 842
K I + RK
Sbjct: 495 KTIEQAKERK 504
>gi|412992605|emb|CCO18585.1| predicted protein [Bathycoccus prasinos]
Length = 594
Score = 216 bits (550), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 159/462 (34%), Positives = 244/462 (52%), Gaps = 34/462 (7%)
Query: 375 ILSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFL 434
ILS F +S T++ + G+ +MT VQ + L G+D + A+TG+GK++AFL
Sbjct: 95 ILSSATFASLDLSNPTMQGIKELGHEKMTEVQARCIPPLLAGRDVLGAARTGSGKTLAFL 154
Query: 435 LPAIEAVLKATSSSTTQLVP--PIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVG 492
+P E + A + +P V++L PTRELA QI + A L++ H L + G
Sbjct: 155 IPCCELLYHA------KFMPRNGCGVMVLSPTRELAMQIYSVAQQLMQKHSQTHGLLMGG 208
Query: 493 GTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFR 552
R ++ ++ +LVATPGRLLDH++N G + LK+ V+DEAD +LD+GF
Sbjct: 209 ANRRAEGEKLIKG--VNLLVATPGRLLDHMQNTRGF--QYSSLKVFVMDEADRMLDIGFE 264
Query: 553 KDVENIVDCLPRRRQSLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSC 606
+++ IV LP+ RQS+LFSAT + L LK YI +V T ++Q
Sbjct: 265 EEMRTIVKMLPKDRQSMLFSATQTTKVEDLARLSLKTP-LYIGVDDSRAVSTASGVEQGY 323
Query: 607 LVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKP 666
V P E F +L LK+++ KV+VF S+ LL + + V +++ ++
Sbjct: 324 CVVPSEKRFLLLFTFLKKNL----KKKVMVFFSSCNSVKYHAELLNYIDIPVSDIHGKQK 379
Query: 667 QLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREG 726
Q R EF + R IL+ +DV+ARG+D PDV ++Q P D ++YIHR+GRT R G
Sbjct: 380 QQRRTTTFFEFCKADRGILLCTDVAARGLDIPDVDWIIQYDPPDDPKEYIHRVGRTAR-G 438
Query: 727 KEGEG--VLLLAPWEEYFLDDLKD--LPLDKLQLPHLN-PEIQLQMDNHMAK---IDNNV 778
+G G +L L P E FL LK+ +PL++ + P +Q Q++ + K + +
Sbjct: 439 TDGRGRALLFLIPGELGFLKYLKNAKVPLNEYEFPQKKIANVQSQLEKLVEKNYYLHTSA 498
Query: 779 KEAAYHAWLGYYNSIREIGRDKTTLVELANKFAQSIGLQRPP 820
K+ AY A++ YNS ++LA S G RPP
Sbjct: 499 KD-AYRAYILAYNSHTLKDVYNVHALDLA-AVGLSFGFSRPP 538
>gi|423617263|ref|ZP_17593097.1| hypothetical protein IIO_02589 [Bacillus cereus VD115]
gi|401255938|gb|EJR62153.1| hypothetical protein IIO_02589 [Bacillus cereus VD115]
Length = 442
Score = 216 bits (550), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 136/383 (35%), Positives = 201/383 (52%), Gaps = 41/383 (10%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
K F E GIS L G + T +QE + + GKD + +AKTGTGK++AF+LP +
Sbjct: 5 KNFLELGISETFNHTLRENGITEATPIQEKAIPVIMSGKDIIGQAKTGTGKTLAFVLPIL 64
Query: 439 EAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
E + +S + LI+ PTRELA QI E +L + I VL + GG
Sbjct: 65 EKIDPESSD--------VQALIVAPTRELALQITTEIKKMLVQREDINVLAIYGGQDVAQ 116
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
R+L+ + I+VATPGRLLDHI ++ + L L +VLDEAD +L GF D+E+I
Sbjct: 117 QLRKLKGN-THIVVATPGRLLDHIRRET---IDLSNLSTIVLDEADQMLYFGFLYDIEDI 172
Query: 559 VDCLPRRRQSLLFSATMPKEL--------------VLKREHTYIDTVGLGSVETPVKIKQ 604
+D P +Q++LFSATMPK++ ++ E +DT+ +ET + K
Sbjct: 173 LDETPGSKQTMLFSATMPKDIKKLAKRYMDEPQMIQVQSEEVTVDTIEQRVIETTDRAK- 231
Query: 605 SCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSR 664
P L F + + ++FC T + S LY L+ + N E++
Sbjct: 232 -----PDALRFVMDRD---------QPFLAVIFCRTKVRASKLYDNLKGLGYNCAELHGD 277
Query: 665 KPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGR 724
PQ R+R+ + FR +K L+ +DV+ARG+D VT V IP D E YIHR+GRTGR
Sbjct: 278 IPQAKRERVMKSFREAKIQYLIATDVAARGLDVDGVTHVFNYDIPEDVESYIHRIGRTGR 337
Query: 725 EGKEGEGVLLLAPWEEYFLDDLK 747
G G + +A +E L++++
Sbjct: 338 AGGSGLAITFVAAKDEKHLEEIE 360
>gi|198429555|ref|XP_002122319.1| PREDICTED: similar to DEAD (Asp-Glu-Ala-Asp) box polypeptide 18
isoform 1 [Ciona intestinalis]
Length = 627
Score = 216 bits (550), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 156/453 (34%), Positives = 247/453 (54%), Gaps = 35/453 (7%)
Query: 385 GISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKA 444
G+S LT+KA+ G+ M +Q ++ LEG+D + AKTG+GK++AFL+PAIE + K
Sbjct: 148 GVSDLTLKAIEDMGFSHMMEIQAKSIPPLLEGRDLLAAAKTGSGKTLAFLIPAIELMYK- 206
Query: 445 TSSSTTQLVP--PIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRR 502
+ +P V+++ PTRELA QI LLK+H L ++GG+ + ++
Sbjct: 207 -----LRFMPRNGTGVIVISPTRELAMQIYGVLQDLLKHHCQTYGL-IMGGSNRSSEAKK 260
Query: 503 LESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCL 562
L + I+VATPGRLLDH++N R L+ L++DEAD +L++GF ++++ IV L
Sbjct: 261 L-GNGINIIVATPGRLLDHLQNTQEFMFR--NLQCLIIDEADRILEVGFEEEMKQIVRLL 317
Query: 563 PRRRQSLLFSATMPKEL------VLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQ 616
P+RRQ++LFSAT K++ LK+ Y+ T ++Q V P E F
Sbjct: 318 PKRRQTMLFSATQTKKIEDLARVSLKKMPLYVGVDDSEQSATVDGLEQGYAVCPSEKRFL 377
Query: 617 ILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEE 676
+L L+ + D KV+VF S+ M Y LL + + ++ R+ Q R +
Sbjct: 378 VLFTFLRRN----RDKKVMVFFSSCMSVKFHYELLNYIDLPCMSIHGRQKQTKRTTTFFQ 433
Query: 677 FRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEG--VLL 734
F + + IL+ +DV+ARG+D P+V +VQ P D ++YIHR+GRT R G G G +L
Sbjct: 434 FCNADKGILLCTDVAARGLDIPEVDWIVQFDPPDDPKEYIHRVGRTAR-GVNGRGHALLF 492
Query: 735 LAPWEEYFLDDLKD--LPLDKLQLPHLN-PEIQLQMDNHMAK--IDNNVKEAAYHAWLGY 789
L P E FL L+ +P+ + + IQ Q++ + K + + AY +++
Sbjct: 493 LRPSELGFLHYLRHAKVPVSEFEFSWSKIANIQTQLERLIQKNYFLHKSSQEAYKSYIRA 552
Query: 790 Y--NSIREIGRDKTTLVELANKFAQSIGLQRPP 820
Y +S++ I +T ++LA K A S G PP
Sbjct: 553 YASHSLKSIFNVET--LDLA-KVASSFGFPVPP 582
>gi|340372364|ref|XP_003384714.1| PREDICTED: probable ATP-dependent RNA helicase DDX10-like
[Amphimedon queenslandica]
Length = 716
Score = 216 bits (550), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 148/456 (32%), Positives = 240/456 (52%), Gaps = 26/456 (5%)
Query: 377 SQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLP 436
S ++F + +S T++ L GY +T +Q+A + + L GKD + AKTG+GK++AFL+P
Sbjct: 44 SMEKFTDIPLSSKTLQGLRKNGYSNLTDIQKAAIPSALRGKDILGAAKTGSGKTLAFLIP 103
Query: 437 AIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRF 496
+E + + + L LI+ PTRELA Q + HD L ++GG
Sbjct: 104 VLELLWRERWTQMDGL----GALIISPTRELAYQTFDVLYKIGGEHDFSAGL-IIGGKDL 158
Query: 497 KVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVE 556
++ R+ I++ TPGRLL H++ + LK+LVLDEAD +LDLGF + +
Sbjct: 159 GFERARILK--TNIIICTPGRLLQHMDETPNFECQ--SLKILVLDEADRILDLGFCETMR 214
Query: 557 NIVDCLPRRRQSLLFSATMPKE-----LVLKREHTYIDTVGLGSVETPVKIKQSCLVAPH 611
+IV+ LP RQ+LLFSAT K L+ E Y+ TP +++QS +V
Sbjct: 215 SIVENLPSERQTLLFSATQTKSVKDLALLSLSEPEYLSVHEESETSTPQRLQQSYVVCKL 274
Query: 612 ELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREM--YSRKPQLY 669
E L +K H+L K I+F S+ Y R ++ V M Y R+ Q+
Sbjct: 275 EEKISTLFSFIKTHLL----VKSIIFLSSCKQVRFTYEAFRRLRPGVPLMCLYGRQNQVK 330
Query: 670 RDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEG 729
R + ++F K +L+ +D++ARG+D+P V VVQ+ P D YIHR+GRT R K+G
Sbjct: 331 RVAVYKDFCQKKAAVLLCTDIAARGLDFPSVHWVVQLDCPEDTNTYIHRVGRTARYEKDG 390
Query: 730 EGVLLLAPWEEYFLDDL--KDLPLDKLQL-PHLNPEIQLQMDNHMAKIDNNVKEAAYHAW 786
+L + P E + +L K +P++++++ P IQ +++ A+ D +K+ A ++
Sbjct: 391 HALLFILPSEMEMIKELVEKKIPIEEIKIDPKKLVSIQGKLEAFCAQ-DTELKQLAQKSF 449
Query: 787 LGYYNSIREIGRDKTTLVEL--ANKFAQSIGLQRPP 820
+ Y S+ K V +++A S+GL + P
Sbjct: 450 IRYLRSVHLQSNKKVFDVRKLPTSEYALSLGLSQAP 485
>gi|218231258|ref|YP_002367146.1| ATP-dependent RNA helicase [Bacillus cereus B4264]
gi|228939601|ref|ZP_04102185.1| ATP-dependent RNA helicase [Bacillus thuringiensis serovar berliner
ATCC 10792]
gi|228972459|ref|ZP_04133068.1| ATP-dependent RNA helicase [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228979080|ref|ZP_04139429.1| ATP-dependent RNA helicase [Bacillus thuringiensis Bt407]
gi|410674757|ref|YP_006927128.1| DEAD-box ATP-dependent RNA helicase CshA [Bacillus thuringiensis
Bt407]
gi|452198800|ref|YP_007478881.1| ATP-dependent RNA helicase BA2475 [Bacillus thuringiensis serovar
thuringiensis str. IS5056]
gi|218159215|gb|ACK59207.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Bacillus cereus
B4264]
gi|228780666|gb|EEM28884.1| ATP-dependent RNA helicase [Bacillus thuringiensis Bt407]
gi|228787281|gb|EEM35251.1| ATP-dependent RNA helicase [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228820093|gb|EEM66134.1| ATP-dependent RNA helicase [Bacillus thuringiensis serovar berliner
ATCC 10792]
gi|409173886|gb|AFV18191.1| DEAD-box ATP-dependent RNA helicase CshA [Bacillus thuringiensis
Bt407]
gi|452104193|gb|AGG01133.1| ATP-dependent RNA helicase BA2475 [Bacillus thuringiensis serovar
thuringiensis str. IS5056]
Length = 458
Score = 216 bits (549), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 136/383 (35%), Positives = 200/383 (52%), Gaps = 41/383 (10%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
K F E GIS L G + T +QE + + GKD + +AKTGTGK++AF+LP +
Sbjct: 5 KNFLELGISETFNHTLRENGITEATPIQEKAIPVIMSGKDIIGQAKTGTGKTLAFVLPIL 64
Query: 439 EAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
E + S + LI+ PTRELA QI E +L + I VL + GG
Sbjct: 65 EKIDPECSD--------VQALIVAPTRELALQITTEIKKMLVQREDINVLAIYGGQDVAQ 116
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
R+L+ + I+VATPGRLLDHI ++ + L L +VLDEAD +L GF D+E+I
Sbjct: 117 QLRKLKGN-THIVVATPGRLLDHIRRET---IDLSNLSTIVLDEADQMLYFGFLYDIEDI 172
Query: 559 VDCLPRRRQSLLFSATMPKEL--------------VLKREHTYIDTVGLGSVETPVKIKQ 604
+D P +Q++LFSATMPK++ ++ E +DT+ +ET + K
Sbjct: 173 LDETPGSKQTMLFSATMPKDIKKLAKRYMDEPQMIQVQSEEVTVDTIEQRVIETTDRAK- 231
Query: 605 SCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSR 664
P L F + + ++FC T + S LY L+ + N E++
Sbjct: 232 -----PDALRFVMDRD---------QPFLAVIFCRTKVRASKLYDNLKGLGYNCAELHGD 277
Query: 665 KPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGR 724
PQ R+R+ + FR +K L+ +DV+ARG+D VT V IP D E YIHR+GRTGR
Sbjct: 278 IPQAKRERVMKSFREAKIQYLIATDVAARGLDVDGVTHVFNFDIPEDVESYIHRIGRTGR 337
Query: 725 EGKEGEGVLLLAPWEEYFLDDLK 747
G G + +A +E L++++
Sbjct: 338 AGGSGLAITFVAAKDEKHLEEIE 360
>gi|308808320|ref|XP_003081470.1| ATP-dependent RNA helicase (ISS) [Ostreococcus tauri]
gi|116059933|emb|CAL55992.1| ATP-dependent RNA helicase (ISS), partial [Ostreococcus tauri]
Length = 777
Score = 216 bits (549), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 159/469 (33%), Positives = 247/469 (52%), Gaps = 48/469 (10%)
Query: 375 ILSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFL 434
ILS F +S T++ + + G+ MT VQ + L GKD + A+TG+GK++AFL
Sbjct: 162 ILSDATFASLELSAPTMRGIESMGFTTMTEVQARCVPPLLAGKDVLGAARTGSGKTLAFL 221
Query: 435 LPAIEAVLKATSSSTTQLVP--PIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVG 492
+P+ E + A + +P V++L PTRELA QI A L++ H L ++G
Sbjct: 222 VPSAELLYHA------KFMPRNGTGVMVLSPTRELALQIYNVAQQLMEKHSQTHGL-IIG 274
Query: 493 GTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFR 552
G + + RL +LVATPGRLLDH++N G + LK+ V+DEAD +LD+GF
Sbjct: 275 GANRRAEAERLIKG-VNLLVATPGRLLDHMQNTRGFT--FSSLKVFVMDEADRMLDIGFE 331
Query: 553 KDVENIVDCLPRRRQSLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSC 606
+++ IV LP+ RQ++LFSAT + L LK YI +V T ++Q
Sbjct: 332 EEMRTIVKMLPKERQTMLFSATQTTKVEDLARLSLKSP-IYIGVDDSRAVSTASGVEQGY 390
Query: 607 LVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKP 666
V P E F +L LK+++ K++VF S+ LL + + V +++ ++
Sbjct: 391 CVVPSEQRFLLLFTFLKKNL----KKKIMVFFSSCNSVKYHAELLNYIDIPVSDIHGKQK 446
Query: 667 QLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREG 726
Q R EF ++R IL+ +DV+ARG+D P V ++Q P D ++YIHR+GRT R G
Sbjct: 447 QQRRTTTFFEFCKAERGILLCTDVAARGLDIPAVDWIIQYDPPDDPKEYIHRVGRTAR-G 505
Query: 727 KEGEG--VLLLAPWEEYFLDDLK--DLPLDKLQLPHLN-PEIQLQMDNHMAK---IDNNV 778
+G+G +L L P E FL LK +PL++ + P +Q Q++ + K + +
Sbjct: 506 TDGKGRALLFLIPEELAFLKYLKAAKVPLNEYEFPTKKIANVQSQLEKLVEKNYYLHTSA 565
Query: 779 KEAAYHAWLGYYNSIREIGRDKTTLVELAN-------KFAQSIGLQRPP 820
++ AY A++ YNS TL ++ N A S G +PP
Sbjct: 566 RD-AYRAYILAYNS--------HTLKDVYNVHSLNLVAVASSFGFHKPP 605
>gi|400594285|gb|EJP62141.1| putative RNA helicase HCA4 [Beauveria bassiana ARSEF 2860]
Length = 815
Score = 216 bits (549), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 151/461 (32%), Positives = 245/461 (53%), Gaps = 32/461 (6%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F + + T K L+A+ + +T VQ + L+G+D + AKTG+GK++AFL+P +E
Sbjct: 54 FSDLPLCRATTKGLSASHFQTLTDVQARAIPLALKGRDILGAAKTGSGKTLAFLVPLLEK 113
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+ +A + L L+L PTRELA QI + + + + ++GG K +
Sbjct: 114 LYRARWTEYDGL----GALVLSPTRELAVQIF-DVLHKIGRYHSFSAGLVIGGKSLKEEA 168
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
RL ILV TPGR+L H++ +GL V L+MLVLDEAD ++D+GF+ V+ +V+
Sbjct: 169 DRLPR--MNILVCTPGRMLQHLDQTAGLDVN--NLQMLVLDEADRIMDMGFQAAVDALVE 224
Query: 561 CLPRRRQSLLFSATMPKEL-----VLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHF 615
LPR RQ+L+FSAT K++ + ++ Y+ TP ++Q +V P
Sbjct: 225 HLPRGRQTLMFSATQSKKVSDLARLSLKDPEYVSVHEAAISATPTNLQQHYIVTPLHEKL 284
Query: 616 QILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK--MNVREMYSRKPQLYRDRI 673
L+ +K + K+IVF S+G +Y LR ++ + + ++ R+ Q+ R I
Sbjct: 285 DTLYGFIKSSLKS----KIIVFLSSGKQVRFVYESLRHLQPGIPLLHLHGRQKQVQRLEI 340
Query: 674 SEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVL 733
+ F A+K+ L +DV ARG+D+P V V+QV P D + YIHR+GRT R EG VL
Sbjct: 341 TNRFTAAKQACLFATDVVARGIDFPAVDWVIQVDCPEDTDTYIHRVGRTARFESEGRAVL 400
Query: 734 LLAPWEEYFLD---DLKDLPLDKLQLPHLNP-EIQLQMDNHMAKIDNNVKEAAYHAWLGY 789
L P EE + + K +P+ K+ + I+ + N M + ++K +++ Y
Sbjct: 401 FLEPSEEDGMIKKLEQKKIPIQKINIKEKKKRSIKNDLQN-MCFQNPDLKYLGQKSFISY 459
Query: 790 YNSIREIGRDKTTL----VELANKFAQSIGLQRPPPL-FRK 825
SI + RDK ++L + +A S+GL P + F+K
Sbjct: 460 TRSIH-LQRDKEVFNLKKLDL-DAYAASLGLPGTPQIKFQK 498
>gi|342888044|gb|EGU87461.1| hypothetical protein FOXB_02046 [Fusarium oxysporum Fo5176]
Length = 795
Score = 216 bits (549), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 164/511 (32%), Positives = 259/511 (50%), Gaps = 44/511 (8%)
Query: 357 KNKLNGNGEKKEKREEEPI--LSQ------------KRFDECGISPLTIKALTAAGYIQM 402
KN ++K KRE+E + L Q K F +S T L A+ + +
Sbjct: 15 KNGRTEQRQQKRKREQEDLQQLEQRVNDLDPKSDEIKNFSHLPLSVPTASGLEASHFQTL 74
Query: 403 TRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLVPPIYVLILC 462
T VQ + L+GKD + AKTG+GK++AFL+P +E + +A + L LI+
Sbjct: 75 TDVQAHAIPLALKGKDVMGAAKTGSGKTLAFLVPVLEKLYRAQWTEYDGL----GALIIS 130
Query: 463 PTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHI 522
PTRELA QI + +NH L ++GG K + RL D ILV TPGR+L H+
Sbjct: 131 PTRELAVQIFQVLRKVGRNHVFSAGL-VIGGKSLKEEAERL--DRMNILVCTPGRMLQHL 187
Query: 523 ENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQSLLFSATMPKEL--- 579
+ +G L++LVLDEAD ++D+GF+ DV+ +V+ LP+ RQ+L+FSAT K++
Sbjct: 188 DQTAGFDAN--NLQILVLDEADRIMDMGFQSDVDALVEHLPKSRQTLMFSATQSKKVSDL 245
Query: 580 --VLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILHHLLKEHILGTPDYKVIVF 637
+ ++ Y+ + TP ++Q +V P L+ +K ++ K+IVF
Sbjct: 246 ARLSLKDPEYVSVHEAAASATPTNLQQHYIVTPLTEKLDTLYGFIKANLKS----KIIVF 301
Query: 638 CSTGMVTSLLYLLLREMK--MNVREMYSRKPQLYRDRISEEFRASKRLILVTSDVSARGM 695
S+G +Y R ++ + + ++ R+ Q+ R I+ F ++K+ L +DV ARG+
Sbjct: 302 LSSGKQVRFVYESFRHLQPGIPLLHLHGRQKQIARMEITNRFTSAKQSCLFATDVVARGI 361
Query: 696 DYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLAPWEE-YFLDDL--KDLPLD 752
D+P V V+Q P D + YIHR+GRT R G VL L P EE L L K +P+
Sbjct: 362 DFPAVDWVIQADCPEDVDTYIHRVGRTARYQSNGRAVLFLDPSEEPGMLKKLEQKKIPIQ 421
Query: 753 KLQLPHLNPEIQLQMDNHMAKIDNNVKEAAYHAWLGYYNSIREIGRDKTTL----VELAN 808
K+ + + M + ++K A++ Y SI + RDK ++L +
Sbjct: 422 KVNVKEKKKKSIKDQLQSMCFQNPDLKYLGQKAFISYTRSIH-LQRDKDVFKFNKLDL-D 479
Query: 809 KFAQSIGLQRPPPL-FRKTALKMGLKDIPGI 838
FA S+GL P + FRK +K+ P +
Sbjct: 480 GFAASLGLPGTPQVKFRKGEDIKRIKNAPRV 510
>gi|340960708|gb|EGS21889.1| ATP-dependent RNA helicase-like protein [Chaetomium thermophilum
var. thermophilum DSM 1495]
Length = 812
Score = 216 bits (549), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 154/475 (32%), Positives = 248/475 (52%), Gaps = 34/475 (7%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
K+F + + T L A+ Y MT +Q A + L+G+D + AKTG+GK++AFL+P +
Sbjct: 49 KKFADLPLCEPTASGLRASHYEVMTDIQRAAIPLALKGRDILGAAKTGSGKTLAFLVPVL 108
Query: 439 EAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
E + +A + L LI+ PTRELA QI E + + H ++GG K
Sbjct: 109 EKLYRAQWTEYDGL----GALIISPTRELAIQIF-EVLRKIGRHHYFSAGLVIGGKSLKE 163
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
+ RL ILV TPGR+L H++ + V L++LVLDEAD ++D+GF++ V+ +
Sbjct: 164 EAERLGR--MNILVCTPGRMLQHLDQTANFDVN--NLQILVLDEADRIMDMGFQQAVDAL 219
Query: 559 VDCLPRRRQSLLFSATMPKEL-----VLKREHTYIDTVGLGSVETPVKIKQSCLVAPHEL 613
++ LP+ RQ+LLFSAT K + + ++ Y+ TP ++Q +V P
Sbjct: 220 IEHLPKSRQTLLFSATQSKRVSDLARLSLKDPEYVSVHEAAPTATPATLQQHYIVTPLHE 279
Query: 614 HFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK--MNVREMYSRKPQLYRD 671
L L+ ++ K++VF S+G +Y R M+ + + ++ R+ Q+ R
Sbjct: 280 KLDTLWGFLRSNL----KSKILVFLSSGKQVRFVYESFRRMQPGIPLLHLHGRQKQIARM 335
Query: 672 RISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEG 731
I+ F A+K L +DV ARG+D+P V V+QV P D + YIHR+GRT R +G
Sbjct: 336 EITNRFAAAKYSCLFATDVVARGIDFPAVDWVIQVDCPEDADTYIHRVGRTARYESKGRA 395
Query: 732 VLLLAPWEEY-FLDDL--KDLPLDKLQLPHLNPEIQLQMDNHMAKID---NNVKEAAYHA 785
VL L P EE FL L K +P+ ++ H+ + + + N + + +VK A
Sbjct: 396 VLFLLPSEEEGFLKRLEHKKVPIQRV---HVREKKKKSIKNELQSLCFQFADVKYLGQKA 452
Query: 786 WLGYYNSIREIGRDKTTLVELA---NKFAQSIGLQRPPPL-FRKTALKMGLKDIP 836
++ Y S+ + +DK A + FA+S+GL P + F+K LK++P
Sbjct: 453 FISYVRSVY-LQKDKEVFKFDALDLDTFAESLGLPGTPQIKFQKGEDVKRLKNMP 506
>gi|451811659|ref|YP_007448114.1| ATP-dependent RNA helicase RhlE [Candidatus Kinetoplastibacterium
crithidii TCC036E]
gi|451776817|gb|AGF47816.1| ATP-dependent RNA helicase RhlE [Candidatus Kinetoplastibacterium
crithidii TCC036E]
Length = 456
Score = 216 bits (549), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 135/411 (32%), Positives = 217/411 (52%), Gaps = 41/411 (9%)
Query: 367 KEKREEEPILSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTG 426
KEKRE + Q FD G+ L + ++ + GY T +QE + L G+D + A+TG
Sbjct: 2 KEKRENKN--KQILFDSFGLDQLLLNSINSIGYDTPTAIQEKAIPFILNGRDVLGAAQTG 59
Query: 427 TGKSIAFLLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIG 486
TGK+ AF+LP I +L +SST+ + VLIL PTRELA+Q+ + KN + +
Sbjct: 60 TGKTAAFVLPIINKILPYANSSTSPARHLLRVLILVPTRELANQVYDSVVIYSKNTN-LR 118
Query: 487 VLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHL 546
+ L GG + L+ C+ILVATPGRL+ HIE ++ L +++ VLDEAD +
Sbjct: 119 SVVLFGGADHYNQENNLKLG-CEILVATPGRLIAHIEQG---NLHLQNIEIFVLDEADRM 174
Query: 547 LDLGFRKDVENIVDCLPRRRQSLLFSATMPKELVLKREHTYIDTVGLGSVETPVK----- 601
LD+GF D++ I+ LP+ RQ+L FSAT K ++ +G+ ++ PV+
Sbjct: 175 LDMGFMPDIDKIISKLPKNRQTLFFSATFSK---------FMRKIGMSYLKDPVELDITS 225
Query: 602 -------IKQSCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREM 654
++Q + P+ + + +L +L T +I+F +T + T L LR
Sbjct: 226 PNSIADNVEQLSYIVPNRFKMEAVVSILTARVLET----IIIFTNTKLSTIKLTSFLRSS 281
Query: 655 KMNVREMYSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQ 714
+ ++ K QL R + E F+ +LV +DV+ARG+D ++ V+ IP E
Sbjct: 282 NIQCDSIHGDKSQLERTAVLESFKNGILRVLVATDVAARGLDVLGISCVINFDIPHSPED 341
Query: 715 YIHRLGRTGREGKEGEGV---------LLLAPWEEYFLDDLKDLPLDKLQL 756
Y+HR+GRTGR G + +LL+ E++ + LPL++++L
Sbjct: 342 YVHRIGRTGRANNTGVAISLISNDEEDVLLSSIEKFTDSTILRLPLNQMKL 392
>gi|427785565|gb|JAA58234.1| Putative atp-dependent rna helicase [Rhipicephalus pulchellus]
Length = 596
Score = 216 bits (549), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 162/466 (34%), Positives = 256/466 (54%), Gaps = 39/466 (8%)
Query: 375 ILSQKRFDEC--GISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIA 432
+LS +F +S T+KA+ G+ +MT +Q T+ LEGKD V AKTG+GK++A
Sbjct: 96 VLSDTQFSSLRGKVSDATLKAIEGMGFKRMTEIQAKTIPHLLEGKDVVAAAKTGSGKTLA 155
Query: 433 FLLPAIEAVLKATSSSTTQLVP--PIYVLILCPTRELASQIAAEAIALLKNHD-GIGVLT 489
FL+PA+E + K + +P L++ PTRELA Q LL + +G+
Sbjct: 156 FLIPAVELLYK------LKFMPRNGTGALVIAPTRELAMQTFGVLQELLSGQNQTLGL-- 207
Query: 490 LVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDL 549
++GGT + + +L + LVATPGRLLDH++N S + L+ L++DEAD +LD+
Sbjct: 208 IMGGTNRQSEASKL-AKGVNFLVATPGRLLDHLQNSSEFVYK--NLQCLIIDEADRILDI 264
Query: 550 GFRKDVENIVDCLPRRRQSLLFSATMPK------ELVLKREHTYIDTVGLGSVETPVKIK 603
GF ++V+ I+ LP+RRQ++LFSAT+ K ++ LK E YI T ++
Sbjct: 265 GFEEEVKQILRILPKRRQTMLFSATLTKKTEDLVKVALKSEPLYIGLDENKEQATVEGLE 324
Query: 604 QSCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYS 663
Q +V P + F +L LK++ KV+VF S+ + + LL + + V ++
Sbjct: 325 QGYVVCPSDKRFLLLFTFLKKN----RKKKVMVFFSSCLSVKYHHELLNYIDLPVMSIHG 380
Query: 664 RKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTG 723
++ Q R +F ++ IL+ +DV+ARG+D P+V +VQ P D ++YIHR+GRT
Sbjct: 381 KQKQAKRTTTFFQFCNAESGILLCTDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTA 440
Query: 724 R-EGKEGEGVLLLAPWEEYFLDDLK--DLPLDKLQLPHLN-PEIQLQMDNHMAK---IDN 776
R EG G +L+L P E FL LK +PL + + IQ Q++ ++K +
Sbjct: 441 RGEGGRGHALLILRPEEVGFLRYLKVAKVPLQEFEFSWAKIANIQPQLEKLISKNYYLHM 500
Query: 777 NVKEAAYHAWLGYYNS--IREIGRDKTTLVELANKFAQSIGLQRPP 820
+ KE AY A++ Y+S ++ I D TL + + A+S G PP
Sbjct: 501 SAKE-AYKAYVRAYDSHHLKSI-FDVNTLDLI--QVAKSFGFLVPP 542
>gi|388583939|gb|EIM24240.1| DEAD-domain-containing protein [Wallemia sebi CBS 633.66]
Length = 795
Score = 216 bits (549), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 151/463 (32%), Positives = 247/463 (53%), Gaps = 44/463 (9%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F+E IS + K L A G+++MT +Q AT L+GKD V A+TG+GK++++L+P +E+
Sbjct: 88 FNELPISNQSKKGLKANGFVKMTEIQSATTHLALKGKDLVGSARTGSGKTLSYLVPMLES 147
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+ K S+T L L++ PTRELA QI + + + NH L+GG + ++
Sbjct: 148 LYKDKWSNTDGL----GALVVAPTRELALQIF-KVLHSIGNHHSFSAGLLIGGKNVQQEK 202
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
RL + IL+ATPGRLL H++ G + LK+L+LDEAD +LDLGF+K ++ I++
Sbjct: 203 TRL--NRMNILIATPGRLLQHMDETYGFNAD--NLKLLILDEADRILDLGFQKTIQAILE 258
Query: 561 CLP--RRRQSLLFSATM-PKELVLKR----EHTYIDTVG-LGSVETPVKIKQSCLVAPHE 612
LP RQ+LLFSAT+ P L + +Y+ G G TP + Q V P +
Sbjct: 259 QLPPTHTRQNLLFSATISPSVASLAKLSLNNPSYVQIGGDNGEDPTPKNLAQFYSVIPLD 318
Query: 613 LHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK--MNVREMYSRKPQLYR 670
+L +K H+ KV+VF S+ +Y ++ ++ ++ + Q R
Sbjct: 319 RKLDVLFGFIKTHLKN----KVLVFASSCKQVRHIYETFSHLRPGTSLMHLHGKLKQTKR 374
Query: 671 DRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGE 730
+ +F + +L +D++ARG+D P V VVQ+ IP D + YIHR+GRT R +G
Sbjct: 375 NATLTKFSQASHAVLFATDIAARGLDIPAVDWVVQLDIPEDADTYIHRVGRTARYNSKGS 434
Query: 731 GVLLLAPWEEYFLDDLKDLPLDKLQLPHLNPEIQLQMDNHMAKIDNNVKEAAYH------ 784
++L+ P E ++ L+ L++ H+ P++ + M I N ++ A+
Sbjct: 435 SLMLVEPSE-------REGILNNLKIKHIEPKLLKIKEKLMQPISNALQAHAFQDTEIKY 487
Query: 785 ----AWLGYYNSIREIGRDKTT--LVEL-ANKFAQSIGLQRPP 820
A++ Y S+ + +DK T + +L K+A S+GL P
Sbjct: 488 LAQKAFVSYIRSVY-LQKDKETFNVAKLPVEKYASSLGLPGVP 529
>gi|225680133|gb|EEH18417.1| ATP-dependent RNA helicase dbp4 [Paracoccidioides brasiliensis
Pb03]
Length = 816
Score = 216 bits (549), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 147/456 (32%), Positives = 239/456 (52%), Gaps = 33/456 (7%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F + +S ++ L+A+ + +T +Q L L+G+D + AKTG+GK++AFL+P +E
Sbjct: 51 FADLPLSEASLDGLSASHFKTLTSIQAKALPHALKGRDILGAAKTGSGKTLAFLVPLLEL 110
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+ + + L L+L PTRELA QI E + + H ++GG + +Q
Sbjct: 111 LYRKQWTEYDGL----GALVLSPTRELAIQIF-EVLRKIGRHHSFSAGLVIGGKSLQEEQ 165
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
RL ILV TPGR+L H++ + +++LVLDEAD ++D+GF+ V+ IV+
Sbjct: 166 ERLGR--MNILVCTPGRMLQHMDQTAAFDTNR--IQLLVLDEADRIMDMGFQNTVDAIVE 221
Query: 561 CLPRRRQSLLFSATMPKEL-----VLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHF 615
LP+ RQ++LFSAT +++ + R+ YI S TP K++Q+ +V P
Sbjct: 222 HLPKERQTMLFSATQTQKVSDLARLSLRDPEYISVHEAASSATPAKLQQNYIVTPLPEKL 281
Query: 616 QILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK--MNVREMYSRKPQLYRDRI 673
L ++ + K++VF S+G +Y R M+ +++ ++ R+ Q R I
Sbjct: 282 DTLWSFIRSSLKS----KIMVFFSSGKQVRFVYESFRHMQPGISLLHLHGRQKQGARVDI 337
Query: 674 SEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVL 733
+++F +K L +D++ARG+D+P V V+QV P D + YIHR GRT R + G VL
Sbjct: 338 TKKFSVAKHACLFATDIAARGLDFPAVDWVIQVDCPEDADTYIHRAGRTARYERNGRAVL 397
Query: 734 LLAPWEEYFLDDLKDLPLDKLQLPHLN------PEIQLQMDNHMAKIDNNVKEAAYHAWL 787
L P EE + LK L K+ + +N I+ Q+ N M D +K A++
Sbjct: 398 FLEPSEEAAM--LKRLEQKKIPIEKINVRTKKQQSIKHQLQN-MCFKDPALKYLGQKAFI 454
Query: 788 GYYNSIREIGRDKTTLV--ELA-NKFAQSIGLQRPP 820
Y SI + +DK V +L +A S+GL P
Sbjct: 455 SYVKSIH-VQKDKEVFVVKDLPLEAYAASLGLPGAP 489
>gi|444319404|ref|XP_004180359.1| hypothetical protein TBLA_0D03400 [Tetrapisispora blattae CBS 6284]
gi|387513401|emb|CCH60840.1| hypothetical protein TBLA_0D03400 [Tetrapisispora blattae CBS 6284]
Length = 775
Score = 215 bits (548), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 151/466 (32%), Positives = 248/466 (53%), Gaps = 43/466 (9%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F + IS T++ L A ++++T +Q+ ++ L+G D + AKTG+GK++AFL+P +E
Sbjct: 44 FKDLPISNATLRGLKEASFVKLTEIQKNSIPISLKGYDVLGAAKTGSGKTLAFLIPVLEK 103
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+ + + L LI+ PTRELA QI E + + + ++GG K +
Sbjct: 104 LYRENWTEFDGLG----ALIISPTRELAIQIY-EVLLKIGSRTSFSAGLVIGGKDVKFES 158
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
R+ IL+ TPGR+L H++ GL+ L L+MLVLDEAD LD+GF+K ++ IV+
Sbjct: 159 ERISR--INILIGTPGRILQHMDQAVGLN--LNNLQMLVLDEADRCLDMGFKKTLDAIVN 214
Query: 561 CLPRRRQSLLFSATMPKELV-LKR----EHTYIDTVGL------GSVETPVKIKQSCLVA 609
LP RQ+LLFSAT + L L R ++ I T+ + G+ TP ++QS +
Sbjct: 215 NLPISRQTLLFSATQSQSLDDLARLSLTDYKSIGTLDIVKENETGASATPETLQQSYIDV 274
Query: 610 PHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK--MNVREMYSRKPQ 667
P + L +K H+ K+I+F S+ +Y R+++ +++ ++ R+ Q
Sbjct: 275 PLQDKLDTLFSFIKTHLKN----KMIIFLSSSKQVHFVYETFRKLQPGISLMHLHGRQKQ 330
Query: 668 LYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGK 727
R ++F ++++ L +DV ARG+D+P V VVQV P D + YIHR+GR R GK
Sbjct: 331 KARTETLDKFSRAQQVCLFATDVVARGIDFPSVDWVVQVDCPEDVDTYIHRVGRCARYGK 390
Query: 728 EGEGVLLLAPWEEY-FLDDL-------KDLPLDKLQLPHLNPEIQLQMDNHMAKIDNNVK 779
+G+ +++L P EE FL L K L + + + + P++Q + D +K
Sbjct: 391 QGKSLIMLTPTEEAGFLKRLASKKIEPKKLVIKQSKKRSIKPQLQ-----SILFQDPELK 445
Query: 780 EAAYHAWLGYYNSIREIGRDKTTLV--EL-ANKFAQSIGLQRPPPL 822
A++ Y SI I +DK EL ++A S+GL P +
Sbjct: 446 YLGQKAFISYVKSIY-IQKDKEVFKFDELPVEEYANSLGLPGAPKI 490
>gi|433457741|ref|ZP_20415720.1| DNA/RNA helicase [Arthrobacter crystallopoietes BAB-32]
gi|432194443|gb|ELK51067.1| DNA/RNA helicase [Arthrobacter crystallopoietes BAB-32]
Length = 635
Score = 215 bits (548), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 150/445 (33%), Positives = 221/445 (49%), Gaps = 22/445 (4%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F + G+ + ALT GY + + +Q AT+ A LEG+D V A+TGTGK+ AF +PA+
Sbjct: 26 FTDFGLDGRVLAALTDVGYEKPSPIQAATIPALLEGRDVVGLAQTGTGKTAAFAIPALSR 85
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+ + + TQ +L+L PTRELA Q+A + + + VL + GG+ +
Sbjct: 86 MAELPPTKNTQ------ILVLAPTRELALQVAEAFSSYAAHMEDFTVLPVYGGSAYGPQL 139
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
L Q++V TPGR++DHIE S + L L+ +VLDEAD +L +GF ++V+ I+D
Sbjct: 140 AGLRRG-AQVVVGTPGRVIDHIEKGS---LDLSELQYVVLDEADEMLRMGFAEEVDRILD 195
Query: 561 CLPRRRQSLLFSATMPKELVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQIL-- 618
P +Q LFSATMP + + D E VK K S + + Q++
Sbjct: 196 ATPEEKQVALFSATMPTAIRRIAKKYLKD-----PAEISVKSKTSTGTNIRQRYVQVMGA 250
Query: 619 HHL-LKEHILGTPDYK-VIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEE 676
H L IL T ++ VI F T M T L L+ + PQ R+R E
Sbjct: 251 HKLDAMTRILETEEFDGVIAFVRTKMATEDLADKLKARGFTAAAINGDIPQQQRERTVEA 310
Query: 677 FRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLA 736
R K ILV +DV+ARG+D ++ VV IP D E Y+HR+GRTGR G+ G+ +L +
Sbjct: 311 LREGKIDILVATDVAARGLDVERISHVVNYDIPHDTESYVHRIGRTGRAGRTGDAILFMT 370
Query: 737 PWEEYFLDDLKDLPLDKLQLPHLNPEIQLQMDNHMAKIDNNVKEAAYHAWLGYYNSIREI 796
P E+Y L ++ ++L HL P + N + K + E L + + E
Sbjct: 371 PREKYLLRAIEKATRQSVELMHL-PTVDTVNANRLEKFAGRITETLESEDLAVFRELVEK 429
Query: 797 --GRDKTTLVELANKFAQSIGLQRP 819
T VE+A A RP
Sbjct: 430 YEANHDVTAVEIAAALAHMAQGGRP 454
>gi|238925630|ref|YP_002939147.1| DEAD/DEAH box helicase-like protein [Eubacterium rectale ATCC
33656]
gi|238877306|gb|ACR77013.1| DEAD/DEAH box helicase-like protein [Eubacterium rectale ATCC
33656]
gi|291524137|emb|CBK89724.1| Superfamily II DNA and RNA helicases [Eubacterium rectale DSM
17629]
gi|291527820|emb|CBK93406.1| Superfamily II DNA and RNA helicases [Eubacterium rectale M104/1]
Length = 530
Score = 215 bits (548), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 137/372 (36%), Positives = 207/372 (55%), Gaps = 21/372 (5%)
Query: 380 RFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIE 439
RFDE ++P ++ + G+ + T +Q + A L G+D + +A+TGTGK+ AF +P +E
Sbjct: 5 RFDELELNPKILRGIKDMGFEEATPIQAQGIPAVLSGRDVIGQAQTGTGKTAAFGIPVLE 64
Query: 440 AVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVD 499
+V SS TQ V+IL PTRELA Q+A E L K G+ VL + GG
Sbjct: 65 SV--DASSHKTQ------VIILSPTRELAIQVADEIRKLAKYMHGVKVLPVYGGQDISRQ 116
Query: 500 QRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIV 559
+ L+ QI++ TPGRL+DH+ K+ +R +K +VLDEAD +L++GFR+D+E ++
Sbjct: 117 IKALKGG-VQIIIGTPGRLMDHLRRKT---IRPDHVKTIVLDEADEMLNMGFREDIETVL 172
Query: 560 DCLPRRRQSLLFSATMPK---ELVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQ 616
+ LP+ Q++LFSATMPK E+ K +H I+ + T I Q +
Sbjct: 173 EYLPQEHQTVLFSATMPKPILEITRKYQHDAINIKIVKKELTVANIDQYYYDVKRKDKID 232
Query: 617 ILHHLLKEHILGTPDYKVIVFCSTG-MVTSLLYLLLREMKMNVREMYSRKPQLYRDRISE 675
+L LL + P +VFC+T MV L Y L + ++ Q+ RDR+ +
Sbjct: 233 VLTRLLDYY---NPKLS-LVFCNTKKMVDELAYELCGR-GYSAEGLHGDMKQVQRDRVMK 287
Query: 676 EFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLL 735
FR K IL+ +DV+ARG+D DV +V +P D E Y+HR+GRTGR G+ G+ +
Sbjct: 288 NFRNGKTDILIATDVAARGIDVDDVEAVFNYDLPQDDEYYVHRIGRTGRAGRCGKAFSFV 347
Query: 736 APWEEYFLDDLK 747
E Y L D++
Sbjct: 348 KGKEVYKLKDIQ 359
>gi|334329818|ref|XP_003341271.1| PREDICTED: probable ATP-dependent RNA helicase DDX10 isoform 2
[Monodelphis domestica]
Length = 881
Score = 215 bits (548), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 140/428 (32%), Positives = 232/428 (54%), Gaps = 31/428 (7%)
Query: 380 RFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIE 439
RF + +S T+K L A Y +T +Q+ T+ L+GKD + AKTG+GK++AFL+P +E
Sbjct: 69 RFSDFPLSRKTLKGLQEAQYRMVTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLE 128
Query: 440 AVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVD 499
+ + +S L VLI+ PTRELA Q + KNHD L ++GG K +
Sbjct: 129 TLYRLQWTSADGL----GVLIISPTRELAYQTFEVLRKVGKNHDFSAGL-IIGGKDLKHE 183
Query: 500 QRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIV 559
R+ + IL+ TPGRLL H++ + L+MLVLDEAD +LD+GF + I+
Sbjct: 184 SERI--NQINILICTPGRLLQHMDETTYFHA--TNLQMLVLDEADRILDMGFADTMNAII 239
Query: 560 DCLPRRRQSLLFSATMPKEL-----VLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELH 614
+ LP++RQ+LLFSAT K + + ++ Y+ TP + Q+ ++
Sbjct: 240 ENLPKKRQTLLFSATQTKSVKDLARLSLKDPAYVWVHEKAKYSTPATLDQNYVICELHQK 299
Query: 615 FQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK--MNVREMYSRKPQLYRDR 672
+L+ LK H+ K IVF ++ L+ + ++ +++ ++ ++ Q+ R
Sbjct: 300 ISVLYSFLKSHL----KKKSIVFFASCKEVQYLFRVFCRLRPGISILALHGKQQQMRRME 355
Query: 673 ISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGV 732
+ EF K +L +D++ARG+D+P V V+Q P D YIHR GRT R + GE +
Sbjct: 356 VYNEFVRKKSAVLFATDIAARGLDFPAVNWVLQFDCPEDANTYIHRAGRTARYKEGGESL 415
Query: 733 LLLAPWE-EYFLDDL--KDLPLDKLQLPHLNPE----IQLQMDNHMAKIDNNVKEAAYHA 785
L+L P E + + L + +P+ +++ +NPE IQ +++ +A+ D ++KE A
Sbjct: 416 LILLPSEVKGMVHQLSQRKVPVKEIK---INPEKLIDIQKKLEAFLAQ-DQDLKERAQRC 471
Query: 786 WLGYYNSI 793
++ Y SI
Sbjct: 472 FVSYLRSI 479
>gi|225455822|ref|XP_002275026.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 51-like isoform 1
[Vitis vinifera]
Length = 580
Score = 215 bits (548), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 147/435 (33%), Positives = 239/435 (54%), Gaps = 34/435 (7%)
Query: 375 ILSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFL 434
I+S + F G+S T+KA+ G+ MT++Q + L GKD + A+TG+GK++AFL
Sbjct: 88 IMSTEAFSALGLSEPTMKAINDMGFGNMTQIQARAIPPLLLGKDVLGAARTGSGKTLAFL 147
Query: 435 LPAIEAVLKATSSSTTQLVP--PIYVLILCPTRELASQIAAEAIALLKNH-DGIGVLTLV 491
+PA+E + + +P V+++CPTRELA Q A A LLK H +G+ ++
Sbjct: 148 IPAVELLYHIS------FMPRNGTGVVVICPTRELAIQTHAVAKDLLKYHTQTLGL--VI 199
Query: 492 GGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGF 551
GG+ + + RL + +LVATPGRLLDH++N G + LK L++DEAD +L+ F
Sbjct: 200 GGSARRGEAERL-AKGANLLVATPGRLLDHLQNTKGFIYK--NLKCLIIDEADRILEANF 256
Query: 552 RKDVENIVDCLPRRRQSLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQS 605
++++ I+ LP+ RQ+ LFSAT K+ L + YID + T ++Q
Sbjct: 257 EEEMKQIIKLLPKERQTALFSATQTKKVEDLARLSFQTTPVYIDVDDGRTKVTNEGLQQG 316
Query: 606 CLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRK 665
V P F +L+ LK ++ KV+VF S+ LLR ++++ +++ ++
Sbjct: 317 YCVVPSAKRFVLLYSFLKRNL----SKKVMVFFSSCNSVKYHSELLRYIQVDCLDIHGKQ 372
Query: 666 PQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGR- 724
Q R +F +++ IL+ +DV+ARG+D PDV +VQ P + ++YIHR+GRT R
Sbjct: 373 KQQKRTSTFFDFCKAEKGILLCTDVAARGLDIPDVDWIVQYDPPDEPKEYIHRVGRTARG 432
Query: 725 EGKEGEGVLLLAPWEEYFLDDL-------KDLPLDKLQLPHLNPEIQLQMDNHMAKIDNN 777
EGK+G +L L P E FL L K+ D +L ++ ++ + N+ N
Sbjct: 433 EGKKGNALLFLIPEELQFLRYLKAAKVPVKEYEYDVKKLANVQSHLEKLVSNNYYL--NK 490
Query: 778 VKEAAYHAWLGYYNS 792
+ AY +++ YNS
Sbjct: 491 SAKDAYRSYILAYNS 505
>gi|126326670|ref|XP_001371368.1| PREDICTED: probable ATP-dependent RNA helicase DDX10 isoform 1
[Monodelphis domestica]
Length = 879
Score = 215 bits (548), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 140/428 (32%), Positives = 232/428 (54%), Gaps = 31/428 (7%)
Query: 380 RFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIE 439
RF + +S T+K L A Y +T +Q+ T+ L+GKD + AKTG+GK++AFL+P +E
Sbjct: 69 RFSDFPLSRKTLKGLQEAQYRMVTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLE 128
Query: 440 AVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVD 499
+ + +S L VLI+ PTRELA Q + KNHD L ++GG K +
Sbjct: 129 TLYRLQWTSADGL----GVLIISPTRELAYQTFEVLRKVGKNHDFSAGL-IIGGKDLKHE 183
Query: 500 QRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIV 559
R+ + IL+ TPGRLL H++ + L+MLVLDEAD +LD+GF + I+
Sbjct: 184 SERI--NQINILICTPGRLLQHMDETTYFHA--TNLQMLVLDEADRILDMGFADTMNAII 239
Query: 560 DCLPRRRQSLLFSATMPKEL-----VLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELH 614
+ LP++RQ+LLFSAT K + + ++ Y+ TP + Q+ ++
Sbjct: 240 ENLPKKRQTLLFSATQTKSVKDLARLSLKDPAYVWVHEKAKYSTPATLDQNYVICELHQK 299
Query: 615 FQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK--MNVREMYSRKPQLYRDR 672
+L+ LK H+ K IVF ++ L+ + ++ +++ ++ ++ Q+ R
Sbjct: 300 ISVLYSFLKSHL----KKKSIVFFASCKEVQYLFRVFCRLRPGISILALHGKQQQMRRME 355
Query: 673 ISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGV 732
+ EF K +L +D++ARG+D+P V V+Q P D YIHR GRT R + GE +
Sbjct: 356 VYNEFVRKKSAVLFATDIAARGLDFPAVNWVLQFDCPEDANTYIHRAGRTARYKEGGESL 415
Query: 733 LLLAPWE-EYFLDDL--KDLPLDKLQLPHLNPE----IQLQMDNHMAKIDNNVKEAAYHA 785
L+L P E + + L + +P+ +++ +NPE IQ +++ +A+ D ++KE A
Sbjct: 416 LILLPSEVKGMVHQLSQRKVPVKEIK---INPEKLIDIQKKLEAFLAQ-DQDLKERAQRC 471
Query: 786 WLGYYNSI 793
++ Y SI
Sbjct: 472 FVSYLRSI 479
>gi|229161413|ref|ZP_04289395.1| ATP-dependent RNA helicase [Bacillus cereus R309803]
gi|228622053|gb|EEK78897.1| ATP-dependent RNA helicase [Bacillus cereus R309803]
Length = 454
Score = 215 bits (548), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 137/377 (36%), Positives = 203/377 (53%), Gaps = 21/377 (5%)
Query: 375 ILSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFL 434
+++ K F E GIS L G + T +QE + + GKD + +AKTGTGK++AF+
Sbjct: 1 MVNLKNFLELGISETFNHTLRENGITEATPIQEQAIPVIMSGKDIIGQAKTGTGKTLAFV 60
Query: 435 LPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGT 494
LP +E + +S + LI+ PTRELA QI E +L + I VL + GG
Sbjct: 61 LPILEKIDPESSD--------VQALIVAPTRELALQITTEIKKMLVQREDINVLAIYGGQ 112
Query: 495 RFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKD 554
R+L+ + I+VATPGRLLDHI ++ + L L +VLDEAD +L GF D
Sbjct: 113 DVAQQLRKLKGN-THIVVATPGRLLDHIRRET---IDLSNLSTIVLDEADQMLYFGFLYD 168
Query: 555 VENIVDCLPRRRQSLLFSATMPKELVLKREHTYID---TVGLGSVETPVK-IKQSCLVAP 610
+E+I+D P +Q++LFSATMPK+ + K Y+D V + S E V I+Q +
Sbjct: 169 IEDILDETPGSKQTMLFSATMPKD-IKKLAKRYMDEPQMVQVQSEEVTVNTIEQRVIETT 227
Query: 611 HELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYR 670
L ++ + ++FC T + S LY L+ N E++ PQ R
Sbjct: 228 DRAKPDALRFVMDRD----QPFLAVIFCRTKVRASKLYDDLKGRGYNCAELHGDIPQAKR 283
Query: 671 DRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGE 730
+R+ + FR +K L+ +DV+ARG+D VT V IP D E YIHR+GRTGR G G
Sbjct: 284 ERVMKSFREAKIQYLIATDVAARGLDVDGVTHVFNYDIPEDVESYIHRIGRTGRAGGSGL 343
Query: 731 GVLLLAPWEEYFLDDLK 747
+ +A +E L++++
Sbjct: 344 AITFVAAKDEKHLEEIE 360
>gi|321455095|gb|EFX66239.1| hypothetical protein DAPPUDRAFT_219114 [Daphnia pulex]
Length = 599
Score = 215 bits (548), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 160/468 (34%), Positives = 259/468 (55%), Gaps = 39/468 (8%)
Query: 375 ILSQKRFD--ECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIA 432
ILS + F E +S LT+KA+ G+ +MT +Q ++ LEG+D + +AKTG+GK++A
Sbjct: 101 ILSDQTFASLEGSVSDLTLKAVEEMGFKKMTEIQAKSIPHLLEGRDLLGQAKTGSGKTLA 160
Query: 433 FLLPAIEAVLKATSSSTTQLVP--PIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTL 490
FL+PAIE + K + +P V+I+ PTREL+ Q LL++H L +
Sbjct: 161 FLIPAIELIYK------LKFMPRNGTGVIIISPTRELSMQTFGVLRELLRHHSHTYGLVM 214
Query: 491 VGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLG 550
G R + + +L ILVATPGRLLDH+ + + + L+ L++DEAD +LD+G
Sbjct: 215 GGANR-QAEAAKLVKG-VNILVATPGRLLDHLNSTTDFLFK--NLQCLIIDEADRVLDIG 270
Query: 551 FRKDVENIVDCLPRRRQSLLFSATMPKE------LVLKREHTYI---DTVGLGSVETPVK 601
F ++++ ++ LP++RQ++LFSAT ++ L LK+E + D V +VE
Sbjct: 271 FEEELKQLIRILPKKRQTMLFSATSTQKIEDLARLALKKEPIIVGVEDVVEKATVEG--- 327
Query: 602 IKQSCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREM 661
++Q +V P E F +L LK + K++VF S+ + + LL + M V +
Sbjct: 328 LEQGYVVCPAEKRFLMLFSFLKRN----RKKKIMVFFSSCLSVKFHHELLNYIDMPVMCI 383
Query: 662 YSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGR 721
+ ++ Q R +F + IL+ +DV+ARG+D P V +VQ P D ++YIHR+GR
Sbjct: 384 HGKQKQTKRTTTFFQFCNADSGILLCTDVAARGLDIPAVDWIVQYDPPDDPKEYIHRVGR 443
Query: 722 TGR-EGKEGEGVLLLAPWEEYFLDDLKD--LPLDKLQLPHLN-PEIQLQMDNHMAK---I 774
T R +G +G +LLL P E FL LK +PL++ + +IQ Q++ ++K +
Sbjct: 444 TARGQGGKGHALLLLRPEELGFLRYLKQAKVPLNEFEFSWSKIADIQPQLEKLVSKNYFL 503
Query: 775 DNNVKEAAYHAWLGYYNSIREIGRDKTTLVELANKFAQSIGLQRPPPL 822
+ KE AY A++ Y+S ++LA + AQS G + PP +
Sbjct: 504 HMSAKE-AYKAYIRAYDSHHLKTIFDVHTLDLA-RVAQSFGFKVPPTV 549
>gi|119331088|ref|NP_001073193.1| probable ATP-dependent RNA helicase DDX10 [Gallus gallus]
gi|82197778|sp|Q5ZJF6.1|DDX10_CHICK RecName: Full=Probable ATP-dependent RNA helicase DDX10; AltName:
Full=DEAD box protein 10
gi|53133616|emb|CAG32137.1| hypothetical protein RCJMB04_18j24 [Gallus gallus]
Length = 875
Score = 215 bits (548), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 148/460 (32%), Positives = 248/460 (53%), Gaps = 37/460 (8%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
+RF + +S T+K L A Y +T +Q T+ L+GKD + AKTG+GK++AF++PA+
Sbjct: 73 QRFSDFPLSKKTLKGLQEAQYRMVTEIQRQTIGLALQGKDVLGAAKTGSGKTLAFIVPAL 132
Query: 439 EAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
E + + +S L VLI+ PTRELA Q + KNHD L ++GG K
Sbjct: 133 ELLYRLQWTSADGLG----VLIISPTRELAFQTFKVLRKVGKNHDFSAGL-IIGGKDLKE 187
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
+ R+ +L+ TPGRLL H++ S L+ML+LDEAD +LD+GF + I
Sbjct: 188 ESERIHH--INMLICTPGRLLQHMDETSYFYAS--DLQMLILDEADRILDMGFADTMNAI 243
Query: 559 VDCLPRRRQSLLFSATMPKEL-----VLKREHTYIDTVGLGSVETPVKIKQSCLVAPHEL 613
++ LP++RQ+LLFSAT K + + ++ Y+ TP + Q+ +V +
Sbjct: 244 IENLPKKRQTLLFSATQTKSVKDLARLSLKDPEYVWVHEKAKFSTPATLDQNYIVCELQH 303
Query: 614 HFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK--MNVREMYSRKPQLYRD 671
+L+ L+ H+ K IVF ++ L+ + +++ + V ++ ++ Q+ R
Sbjct: 304 KINVLYSFLRSHL----KKKSIVFFASCKEVQYLFRVFCKLQPGLPVLALHGKQQQMKRM 359
Query: 672 RISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEG 731
+ F K +L +D++ARG+D+P V V+Q P D YIHR+GRT R + GE
Sbjct: 360 EVYTCFVRKKAAVLFATDIAARGLDFPAVNWVIQFDCPEDANTYIHRVGRTARYKEGGEA 419
Query: 732 VLLLAPWEEY-FLDDL--KDLPLDKLQLPHLNPE----IQLQMDNHMAKIDNNVKEAAYH 784
+L+L P EE ++ L + +P+++++ +NPE IQ +M +A+ D +KE A
Sbjct: 420 LLVLLPSEEKGMVEQLAQRKVPVNEIK---INPEKITDIQKRMQAFLAQ-DQELKEKAQR 475
Query: 785 AWLGYYNSIREIGRDKTTL----VELANKFAQSIGLQRPP 820
++ Y S+ + ++K + LA ++A S+GL P
Sbjct: 476 CFVSYLRSVY-LMKNKEVFDVFKLPLA-EYALSLGLAMAP 513
>gi|198429557|ref|XP_002122407.1| PREDICTED: similar to DEAD (Asp-Glu-Ala-Asp) box polypeptide 18
isoform 2 [Ciona intestinalis]
Length = 575
Score = 215 bits (547), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 156/453 (34%), Positives = 247/453 (54%), Gaps = 35/453 (7%)
Query: 385 GISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKA 444
G+S LT+KA+ G+ M +Q ++ LEG+D + AKTG+GK++AFL+PAIE + K
Sbjct: 96 GVSDLTLKAIEDMGFSHMMEIQAKSIPPLLEGRDLLAAAKTGSGKTLAFLIPAIELMYK- 154
Query: 445 TSSSTTQLVP--PIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRR 502
+ +P V+++ PTRELA QI LLK+H L ++GG+ + ++
Sbjct: 155 -----LRFMPRNGTGVIVISPTRELAMQIYGVLQDLLKHHCQTYGL-IMGGSNRSSEAKK 208
Query: 503 LESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCL 562
L + I+VATPGRLLDH++N R L+ L++DEAD +L++GF ++++ IV L
Sbjct: 209 L-GNGINIIVATPGRLLDHLQNTQEFMFR--NLQCLIIDEADRILEVGFEEEMKQIVRLL 265
Query: 563 PRRRQSLLFSATMPKEL------VLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQ 616
P+RRQ++LFSAT K++ LK+ Y+ T ++Q V P E F
Sbjct: 266 PKRRQTMLFSATQTKKIEDLARVSLKKMPLYVGVDDSEQSATVDGLEQGYAVCPSEKRFL 325
Query: 617 ILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEE 676
+L L+ + D KV+VF S+ M Y LL + + ++ R+ Q R +
Sbjct: 326 VLFTFLRRN----RDKKVMVFFSSCMSVKFHYELLNYIDLPCMSIHGRQKQTKRTTTFFQ 381
Query: 677 FRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEG--VLL 734
F + + IL+ +DV+ARG+D P+V +VQ P D ++YIHR+GRT R G G G +L
Sbjct: 382 FCNADKGILLCTDVAARGLDIPEVDWIVQFDPPDDPKEYIHRVGRTAR-GVNGRGHALLF 440
Query: 735 LAPWEEYFLDDLKD--LPLDKLQLPHLN-PEIQLQMDNHMAK--IDNNVKEAAYHAWLGY 789
L P E FL L+ +P+ + + IQ Q++ + K + + AY +++
Sbjct: 441 LRPSELGFLHYLRHAKVPVSEFEFSWSKIANIQTQLERLIQKNYFLHKSSQEAYKSYIRA 500
Query: 790 Y--NSIREIGRDKTTLVELANKFAQSIGLQRPP 820
Y +S++ I +T ++LA K A S G PP
Sbjct: 501 YASHSLKSIFNVET--LDLA-KVASSFGFPVPP 530
>gi|384180400|ref|YP_005566162.1| ATP-dependent RNA helicase [Bacillus thuringiensis serovar
finitimus YBT-020]
gi|324326484|gb|ADY21744.1| ATP-dependent RNA helicase, DEAD/DEAH box family protein [Bacillus
thuringiensis serovar finitimus YBT-020]
Length = 436
Score = 215 bits (547), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 137/373 (36%), Positives = 200/373 (53%), Gaps = 21/373 (5%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
K F E GIS L G + T +QE + L GKD + +AKTGTGK++AF+LP +
Sbjct: 2 KNFLELGISETFNHTLRENGITEATPIQEQAIPVILSGKDIIGQAKTGTGKTLAFVLPIL 61
Query: 439 EAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
E + S + LI+ PTRELA QI E +L + I VL + GG
Sbjct: 62 EKIDPECSD--------VQALIVAPTRELALQITTEIKKMLVQREDINVLAIYGGQDVAQ 113
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
R+L+ + I+VATPGRLLDHI ++ + L L +VLDEAD +L GF D+E+I
Sbjct: 114 QLRKLKGN-THIVVATPGRLLDHIRRET---IDLSNLSTIVLDEADQMLYFGFLYDIEDI 169
Query: 559 VDCLPRRRQSLLFSATMPKELVLKREHTYID---TVGLGSVETPVK-IKQSCLVAPHELH 614
+D P +Q++LFSATMPK+ + K Y+D + + S E V I+Q +
Sbjct: 170 LDETPGSKQTMLFSATMPKD-IKKLAKRYMDEPQMIQVQSEEVTVNTIEQRVIETTDRAK 228
Query: 615 FQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRIS 674
L ++ + ++FC T + S LY L+ + N E++ PQ R+R+
Sbjct: 229 PDALRFVMDRD----QPFLAVIFCRTKVRASKLYDNLKGLGYNCAELHGDIPQAKRERVM 284
Query: 675 EEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLL 734
+ FR +K L+ +DV+ARG+D VT V IP D E YIHR+GRTGR G G +
Sbjct: 285 KSFREAKIQYLIATDVAARGLDVDGVTHVFNYDIPEDVESYIHRIGRTGRAGGSGLAITF 344
Query: 735 LAPWEEYFLDDLK 747
+A +E L++++
Sbjct: 345 VAAKDEKHLEEIE 357
>gi|302670646|ref|YP_003830606.1| RNA helicase DEAD/DEAH box family protein [Butyrivibrio
proteoclasticus B316]
gi|302395119|gb|ADL34024.1| RNA helicase DEAD/DEAH box family [Butyrivibrio proteoclasticus
B316]
Length = 711
Score = 215 bits (547), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 130/384 (33%), Positives = 211/384 (54%), Gaps = 20/384 (5%)
Query: 380 RFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIE 439
R+DE G+ I+A++ G+ M+ +Q+A + ++GKD + +A+TGTGK+ AF +P +
Sbjct: 60 RYDESGLDERIIRAVSEMGFEYMSPIQKAAIPVMIQGKDIIGQAQTGTGKTAAFGIPLLH 119
Query: 440 AVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVD 499
V A + ++LCPTRELA Q A + K GI VL + GG
Sbjct: 120 QVDPANKH--------LQAVVLCPTRELAMQAADDIRDFAKYMFGIKVLAVYGGQDISRQ 171
Query: 500 QRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIV 559
+ L S+ QI+V TPGR++DH+ + +++ +K+LVLDEAD +LD+GFR+D+E I+
Sbjct: 172 IKAL-SNGVQIVVGTPGRVMDHMRRHT---MKMKDVKVLVLDEADEMLDMGFREDIETIL 227
Query: 560 DCLPRRRQSLLFSATMPKELVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILH 619
+P RQ+ LFSATMP E +LK TY + TP K+ + A + ++++
Sbjct: 228 QGMPMERQTALFSATMP-EAILKITKTYQKSDAEYIKMTP---KEITVAAIEQAYYRVPQ 283
Query: 620 HLLKEHILGTPDY----KVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISE 675
L ++ ++ DY + ++FC+T + L L+ ++ Q RD +
Sbjct: 284 KLKEDVLVRLMDYYNPARSLIFCNTKRMVDQLAESLKGKGYLADGLHGDLSQNQRDTVMN 343
Query: 676 EFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLL 735
FR + IL+ +DV+ARG+D V +V IP D E Y+HR+GRTGR G+ G L+
Sbjct: 344 LFRNGRINILIATDVAARGIDVSGVEAVFNYDIPEDIEYYVHRIGRTGRAGRSGMSFTLV 403
Query: 736 APWEEYFLDDLKDLPLDKLQLPHL 759
E Y L +++ + K++ H+
Sbjct: 404 GGREMYKLREIEKVCHTKIEERHV 427
>gi|425777569|gb|EKV15735.1| DEAD box RNA helicase (Hca4), putative [Penicillium digitatum Pd1]
gi|425779636|gb|EKV17678.1| DEAD box RNA helicase (Hca4), putative [Penicillium digitatum
PHI26]
Length = 808
Score = 215 bits (547), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 148/456 (32%), Positives = 245/456 (53%), Gaps = 29/456 (6%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
K F + +S T K L A+ + +T +Q ++ +G+D + AKTG+GK++AFL+P +
Sbjct: 46 KNFSDLPLSEPTAKGLAASHFKTLTDIQSRAINHAFKGRDILGAAKTGSGKTLAFLVPIL 105
Query: 439 EAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
E + + + L L+L PTRELA QI E + + + ++GG +
Sbjct: 106 ENLYRKKWTELDGL----GALVLSPTRELAIQIF-EVLRKIGRYHNFSAGLVIGGKSLRE 160
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
+Q RL ILV TPGR+L H++ + L+MLVLDEAD ++D+GF+K V+ I
Sbjct: 161 EQDRLGR--MNILVCTPGRMLQHLDQTAMFETN--NLQMLVLDEADRIMDMGFQKTVDAI 216
Query: 559 VDCLPRRRQSLLFSATMPKEL-----VLKREHTYIDTVGLGSVETPVKIKQSCLVAPHEL 613
+D LP++RQ++LFSAT K++ + +E Y+ + TP ++Q V P
Sbjct: 217 LDHLPKQRQTMLFSATQTKKVSDLARLSLQEPEYVSVHEAAASATPSTLQQHYTVTPLPQ 276
Query: 614 HFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK--MNVREMYSRKPQLYRD 671
L ++ ++ K +VF S+G +Y LR+++ +++ ++ R+ Q R
Sbjct: 277 KLDTLWSFIRSNLKS----KTVVFLSSGKQVRFVYESLRQLQPGISLLHLHGRQKQGGRL 332
Query: 672 RISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEG 731
I+ +F ++ +L +DV ARG+D+P V V+Q+ P D + YIHR+GRT R + G
Sbjct: 333 DITTKFSQAQHAVLFATDVVARGLDFPAVDWVIQMDCPEDADTYIHRVGRTARYERVGRA 392
Query: 732 VLLLAPWEEY-FLDDL--KDLPLDKLQL-PHLNPEIQLQMDNHMAKIDNNVKEAAYHAWL 787
VL L P EE FL L K +P++K+ + + ++ Q+ N M D +K A++
Sbjct: 393 VLFLDPSEEKGFLKQLEHKKVPIEKINIKSNKQQSVKNQLQN-MCFKDPELKYLGQKAFI 451
Query: 788 GYYNSIREIGRDKTT--LVELA-NKFAQSIGLQRPP 820
Y SI + +DK T + EL ++A S+GL P
Sbjct: 452 SYVKSIY-VQKDKETFKIKELPLEEYAASLGLPGAP 486
>gi|399017820|ref|ZP_10720009.1| DNA/RNA helicase, superfamily II [Herbaspirillum sp. CF444]
gi|398102587|gb|EJL92767.1| DNA/RNA helicase, superfamily II [Herbaspirillum sp. CF444]
Length = 504
Score = 215 bits (547), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 129/379 (34%), Positives = 208/379 (54%), Gaps = 12/379 (3%)
Query: 374 PILSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAF 433
P + RF++ G+SP +KAL+A GYI T +Q + L+G+D + A+TGTGK+ F
Sbjct: 11 PETPEVRFEDFGLSPDILKALSAQGYIHPTPIQAQAIPVVLQGRDVMGAAQTGTGKTAGF 70
Query: 434 LLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGG 493
LP I+ +L S+S + P+ LIL PTRELA Q+ A+ + + + GG
Sbjct: 71 SLPIIQLLLAHASTSMSPARHPVRALILTPTRELADQV-ADNVKAYSRFTPLRSTVVFGG 129
Query: 494 TRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRK 553
L +I++ATPGRLLDH++ K +V L ++LV+DEAD +LD+GF
Sbjct: 130 VDMAPQTATLRGG-VEIVIATPGRLLDHVQQK---TVNLSQTQILVMDEADRMLDMGFLP 185
Query: 554 DVENIVDCLPRRRQSLLFSATMP---KELVLKREHTYIDTVGLGSVETPVKIKQSCLVAP 610
D++ I++ LP++RQ+L+FSAT K+L ++ + S T ++ Q+
Sbjct: 186 DLQRIINLLPKQRQNLMFSATFSPEIKKLAASFQNNPVTIEVARSNATAERVTQTIYKVD 245
Query: 611 HELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYR 670
+ + H+++E L +VIVF +T + S L L +N ++ K Q R
Sbjct: 246 EDAKSDAVAHIIRERKL----KQVIVFSNTKIGASKLARQLENDGVNASAIHGDKSQGER 301
Query: 671 DRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGE 730
E F+ + +LV +DV+ARG+D D+ V+ + +P + E Y+HR+GRTGR G G+
Sbjct: 302 MAALEAFKQGQVEVLVATDVAARGLDITDLPCVINIDLPYNAEDYVHRIGRTGRAGASGD 361
Query: 731 GVLLLAPWEEYFLDDLKDL 749
+ L + +E L D++ L
Sbjct: 362 AISLFSDKDERLLVDIEKL 380
>gi|225849264|ref|YP_002729428.1| ATP-dependent RNA helicase DbpA [Sulfurihydrogenibium azorense
Az-Fu1]
gi|225644065|gb|ACN99115.1| ATP-dependent RNA helicase DbpA [Sulfurihydrogenibium azorense
Az-Fu1]
Length = 397
Score = 215 bits (547), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 145/375 (38%), Positives = 210/375 (56%), Gaps = 20/375 (5%)
Query: 376 LSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLL 435
+S K F + GIS T+K+L GY + T +QE + A L GKD V +A+TGTGK+ AF +
Sbjct: 1 MSNKTFKDLGISQETLKSLEDLGYSKPTEIQEKAIPAVLSGKDLVAQAQTGTGKTAAFGI 60
Query: 436 PAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTR 495
P +E+V +T Q I L+L PTRELA Q+A E L KN + VL++ GG
Sbjct: 61 PIVESV------NTKQ--KKIQALVLVPTRELAIQVAKEIKDLGKNKK-VFVLSVYGGKS 111
Query: 496 FKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDV 555
K L+ ++V TPGR+ D +E G ++L +KM VLDEAD +L++GF +D+
Sbjct: 112 MKHQIDFLKKGNDVVIVGTPGRVKDLLER--GF-LKLDNVKMFVLDEADRMLEMGFIEDI 168
Query: 556 ENIVDCLPRRRQSLLFSATMPKELV-LKREHTYID--TVGLGSVETPV-KIKQSCLVAPH 611
E+I+ LP RQ+LLFSATMPKE++ L +E D T+ + E V KIKQ
Sbjct: 169 EDIMSYLPEDRQNLLFSATMPKEILELAQEFLNEDYQTIKVKPDEITVEKIKQIIYRVDP 228
Query: 612 ELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRD 671
+ F L +L ++ K I+F T + L L + +V ++ Q R+
Sbjct: 229 KNKFNKLIEVLSQN----QAEKTIIFTQTKLEADQLSEDLSKEGFSVSAIHGDFSQKKRE 284
Query: 672 RISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEG 731
+ FR K ILV +DV+ARG+D V V+ G+P + E Y+HR+GRTGR GKEG
Sbjct: 285 TVLHNFRTGKLKILVATDVAARGLDIKGVELVINYGLPKNAESYVHRIGRTGRAGKEGTA 344
Query: 732 VLLLAPWEEYFLDDL 746
+ + P E+ +L +
Sbjct: 345 ISIPTPSEDKYLQQI 359
>gi|46122619|ref|XP_385863.1| hypothetical protein FG05687.1 [Gibberella zeae PH-1]
gi|91206546|sp|Q4IAS1.1|DBP4_GIBZE RecName: Full=ATP-dependent RNA helicase DBP4
Length = 793
Score = 215 bits (547), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 153/475 (32%), Positives = 244/475 (51%), Gaps = 30/475 (6%)
Query: 377 SQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLP 436
+ K+F E +S T + L A + +T VQ + L+GKD + AKTG+GK++AFL+P
Sbjct: 49 ATKKFSELPLSVPTAEGLEIAHFQTLTDVQARAVPLALKGKDILGAAKTGSGKTLAFLIP 108
Query: 437 AIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRF 496
+E + +A + L LI+ PTRELA+QI E + + ++GG
Sbjct: 109 VLEKLYRAQWTEFDGL----GALIISPTRELAAQIF-EVLRKVGTKHSFSAGLVIGGKSL 163
Query: 497 KVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVE 556
K + RL D ILV TPGR+L H + +G L++LVLDEAD ++D+GF+ V+
Sbjct: 164 KEEAERL--DRMNILVCTPGRMLQHFDQTAGFDAN--NLQILVLDEADRIMDMGFQSAVD 219
Query: 557 NIVDCLPRRRQSLLFSATMPKEL-----VLKREHTYIDTVGLGSVETPVKIKQSCLVAPH 611
+++ LPR RQ+L+FSAT K++ + ++ Y+ TP ++Q +V P
Sbjct: 220 ALIEHLPRERQTLMFSATQSKKVSDLARLSLKDPEYVSVHEAAVSATPTNLQQHYIVTPL 279
Query: 612 ELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK--MNVREMYSRKPQLY 669
L+ +K ++ K+IVF S+G +Y R ++ + + ++ R+ Q
Sbjct: 280 TEKLDTLYGFIKANL----KSKIIVFLSSGKQVRFVYESFRHLQPGIPLLHLHGRQKQGA 335
Query: 670 RDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEG 729
R I+ F A+K+ L +DV ARG+D+P V V+Q P D + YIHR+GRT R G
Sbjct: 336 RMEITSRFTAAKQTCLFATDVVARGIDFPAVDWVIQADCPEDVDTYIHRVGRTARYESNG 395
Query: 730 EGVLLLAPWEEYFL---DDLKDLPLDKLQLPHLNPEIQLQMDNHMAKIDNNVKEAAYHAW 786
VL L P EE + +LK +P+ K+ + + M + ++K A+
Sbjct: 396 RAVLFLDPSEEPGMLKKLELKKIPIQKVNVKEKKKKSIKDQLQSMCFQNPDLKYLGQKAF 455
Query: 787 LGYYNSIREIGRDKTTL----VELANKFAQSIGLQRPPPL-FRKTALKMGLKDIP 836
+ Y SI + RDK ++L + FA S+GL P + FRK +K+ P
Sbjct: 456 ISYSRSIH-LQRDKDVFKFNKLDL-DGFAASLGLPGTPQVKFRKGEDIKKIKNAP 508
>gi|452844682|gb|EME46616.1| hypothetical protein DOTSEDRAFT_70586 [Dothistroma septosporum
NZE10]
Length = 687
Score = 215 bits (547), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 162/502 (32%), Positives = 250/502 (49%), Gaps = 65/502 (12%)
Query: 398 GYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKA---------TSSS 448
G MT VQ AT++ L+G D + +A+TGTGK++AFLLP ++ ++
Sbjct: 102 GMETMTEVQSATINEALKGSDVIAQARTGTGKTLAFLLPILQNIINVDPDLARRTGGRRG 161
Query: 449 TTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPC 508
I LI+ PTRELA QIA EA L +N G+ V T VGGT+ R ++ + C
Sbjct: 162 PRTTADDIRALIISPTRELAEQIADEARKLTRN-TGVIVQTAVGGTQKSAGLRAIQREGC 220
Query: 509 QILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLP----R 564
+LV TPGRL D + + V L LVLDEAD LLD GF +++ I+ LP +
Sbjct: 221 HLLVGTPGRLKDILTDPY-TRVEAPDLSALVLDEADRLLDQGFWPEIQEIMRLLPTPAEK 279
Query: 565 RRQSLLFSATMPKELV------LKREHTYIDTVGLGSVETPVKIKQSCL-VAPHELHFQI 617
RQ+++FSAT+P+E+V LK ++ V T ++ Q + ++ E
Sbjct: 280 DRQTMMFSATIPREVVNLVRSTLKPGFQFVKCVKEDEQPTHERVLQKMVRISGFENSLPT 339
Query: 618 LHHLLKEHIL-----GTPDYKVIVFCSTGMVTSLLYLLLREMK----------------- 655
L + ++ G +K IV+ ++ +L L+ ++
Sbjct: 340 LIEICQKGFQDSKNPGARPFKAIVYYNSTAEVTLAASTLQGLQPTAQEGQDAFGARHPWS 399
Query: 656 -MNVREMYSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQ 714
+ E++++ Q R R +E+F+ IL++SDV+ARGMD+P+VT V+Q+G+P EQ
Sbjct: 400 PARIYEIHAKLTQSQRTRAAEDFKNCTSGILISSDVTARGMDFPNVTHVIQMGLPTSSEQ 459
Query: 715 YIHRLGRTGREGKEGEGVLLLAPWE-EYFLDDLKDLPLDK---LQLPHLN---------- 760
Y+HR+GRT R GKEGEG ++L E + L+ LPL K L +P L+
Sbjct: 460 YVHRIGRTARAGKEGEGWIVLNKIEADEARSRLRGLPLQKDTSLSIPALDLTKAADVPAS 519
Query: 761 -PEIQLQMDNHMAKIDNNVKEAAYHAWLGYYNSIREIGRDKTTLVELANKFAQ-SIGLQR 818
I + ++ + K Y A LG + K+ LVE N +Q GL+
Sbjct: 520 AGRILSMYQKAVQRVPMSEKAKVYLAQLGIFAWYPR----KSELVESMNNLSQFGWGLKT 575
Query: 819 PPPLFRKTALKMGLKDIPGIRL 840
PP + A K+ + I GI++
Sbjct: 576 PPAVPYGLAQKLRINRIEGIQI 597
>gi|358383244|gb|EHK20912.1| hypothetical protein TRIVIDRAFT_50536 [Trichoderma virens Gv29-8]
Length = 805
Score = 215 bits (547), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 128/364 (35%), Positives = 196/364 (53%), Gaps = 20/364 (5%)
Query: 384 CGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLK 443
ISP T L ++ + MT +QE + L+GKD + AKTG+GK++AFL+P +E + +
Sbjct: 57 SAISPATASGLHSSHFTNMTEIQEQAIPLALQGKDILGAAKTGSGKTLAFLVPVLEKLYR 116
Query: 444 ATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRL 503
+ L LIL PTRELA QI E + + H ++GG K + RL
Sbjct: 117 EQWTEFDGL----GALILSPTRELAVQIF-EVLRKIGRHHAFSAGLVIGGKSLKEEAERL 171
Query: 504 ESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLP 563
ILV TPGR+L H++ +G L++LVLDEAD ++DLGF+ V+ +V+ LP
Sbjct: 172 IR--MNILVCTPGRMLQHLDQTAGFDAN--NLQILVLDEADRIMDLGFQSAVDALVEHLP 227
Query: 564 RRRQSLLFSATMPKEL-----VLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQIL 618
+ RQ+L+FSAT K++ + ++ Y+ + TP ++Q +V P L
Sbjct: 228 KSRQTLMFSATQSKKVSDLARLSLKDPEYVSVHQDATTATPTTLQQHYIVTPLPEKLDTL 287
Query: 619 HHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK--MNVREMYSRKPQLYRDRISEE 676
+ +K ++ K+IVF S+G +Y R ++ + + ++ R+ Q+ R I+
Sbjct: 288 YGFIKANVKS----KIIVFLSSGKQVRFVYESFRHLQPGIPLLHLHGRQKQVARLEITNR 343
Query: 677 FRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLA 736
F A+K L +DV ARG+D+P V V+Q P D + YIHR+GRT R G VL L
Sbjct: 344 FTAAKTSCLFATDVVARGIDFPAVDWVIQADCPEDADTYIHRVGRTARFQSNGRAVLFLD 403
Query: 737 PWEE 740
P EE
Sbjct: 404 PSEE 407
>gi|255723333|ref|XP_002546600.1| hypothetical protein CTRG_06078 [Candida tropicalis MYA-3404]
gi|240130731|gb|EER30294.1| hypothetical protein CTRG_06078 [Candida tropicalis MYA-3404]
Length = 572
Score = 215 bits (547), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 167/492 (33%), Positives = 263/492 (53%), Gaps = 44/492 (8%)
Query: 349 ELIRKEISKNKLNGNGEKKEKREEEPILSQKRFDECGISPLTIKALTAAGYIQMTRVQEA 408
EL + ++SK + G+ ++++ ++E L F++ +S T+KA+ G+ +MT+VQ
Sbjct: 87 ELTKPQVSKEAVEGDAQQQQDDDQEEHL----FEDADLSEPTMKAIKEMGFTKMTKVQAK 142
Query: 409 TLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAV--LKATSSSTTQLVPPIYVLILCPTRE 466
T+ L G+D + AKTG+GK++AFL+PAIE + LK + T V+I+ PTRE
Sbjct: 143 TIPPLLAGRDVLGAAKTGSGKTLAFLIPAIELLYSLKIKPRNGTA------VIIITPTRE 196
Query: 467 LASQIAAEAIALLKNHD-GIGVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENK 525
LA QI A L++ H G++ +GG + + +L + +LVATPGRLLDH++N
Sbjct: 197 LALQIFGVARELMQYHSQTCGIV--IGGADRRQEATKL-AKGVNLLVATPGRLLDHLKNT 253
Query: 526 SGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRR-RQSLLFSATMPKE------ 578
G LK LV+DEAD +L++GF +++ I+ LP RQS+LFSAT +
Sbjct: 254 PGFV--FSNLKALVIDEADRILEIGFEDEMKQIIKILPNEDRQSMLFSATQTTKVEDLAR 311
Query: 579 LVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILHHLLKEHILGTPDYKVIVFC 638
+ L+ YI+ V V T ++Q +V + F +L LK ++ K+IVF
Sbjct: 312 MSLRPGPLYINVVPDKDVSTADGLEQGYVVCDSDKRFLLLFSFLKRNV----KKKIIVFL 367
Query: 639 STGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYP 698
S+ LL + + V +++ ++ Q R EF +K+ ILV +DV+ARG+D P
Sbjct: 368 SSCNSVKFYSELLNYIDLPVLDLHGKQKQQKRTNTFFEFCNAKQGILVCTDVAARGLDIP 427
Query: 699 DVTSVVQVGIPPDREQYIHRLGRTGREGKEGEG--VLLLAPWEEYFLDDLK--DLPLDKL 754
V ++Q P D YIHR+GRT R G +G+G ++ L P E FL LK +PL++
Sbjct: 428 AVDWIIQFDPPDDPRDYIHRVGRTAR-GTQGKGKSLMFLTPSELGFLRYLKAAKVPLNEY 486
Query: 755 QLPH---LNPEIQLQMDNHMAKIDNNVKEAAYHAWLGYYNS--IREIGR-DKTTLVELAN 808
+ P N + QL + N + Y A+L Y S ++ + + DK L
Sbjct: 487 EFPSNKIANIQSQLTKLIKTNYLLNQSAKDGYRAYLQAYASHGLKTVYQIDKLDL----K 542
Query: 809 KFAQSIGLQRPP 820
K A S GL + P
Sbjct: 543 KVASSFGLDQVP 554
>gi|160380697|sp|Q0CMM5.2|DBP4_ASPTN RecName: Full=ATP-dependent RNA helicase dbp4
Length = 804
Score = 215 bits (547), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 151/460 (32%), Positives = 246/460 (53%), Gaps = 33/460 (7%)
Query: 377 SQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLP 436
S K F + +S T+ L+A+ Y +T +Q +S L+G+D + AKTG+GK++AFL+P
Sbjct: 44 SFKAFTDLPLSEPTLSGLSASHYKTLTDIQSRAVSHALKGRDILGAAKTGSGKTLAFLIP 103
Query: 437 AIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRF 496
+E + + + L LIL PTRELA QI E + + + ++GG
Sbjct: 104 VLENLYRKQWAEHDGL----GALILSPTRELAIQIF-EVLRKVGRYHHFSAGLVIGGKSL 158
Query: 497 KVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVE 556
K +Q RL ILV TPGR+L H++ + L+MLVLDEAD ++D+GF+K V+
Sbjct: 159 KEEQERLGK--MNILVCTPGRMLQHLDQTALFDT--YNLQMLVLDEADRIMDMGFQKTVD 214
Query: 557 NIVDCLPRRRQSLLFSATMPKEL-----VLKREHTYIDTVGLGSVETPVKIKQSCLVAPH 611
I+ LP+ RQ++LFSAT K++ + ++ Y+ + TP ++Q +V P
Sbjct: 215 AIIGHLPKERQTMLFSATQTKKVSDLARLSLQDPEYVAVHEAAASATPSTLQQHYVVTPL 274
Query: 612 ELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK--MNVREMYSRKPQLY 669
IL ++ ++ K IVF S+G +Y R ++ + + ++ R+ Q
Sbjct: 275 PQKLDILWSFIRSNLKS----KTIVFLSSGKQVRFVYEAFRHLQPGIPLMHLHGRQKQGG 330
Query: 670 RDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEG 729
R I+ ++ +K +L ++DV+ARG+D+P V V+Q+ P D + YIHR+GRT R ++G
Sbjct: 331 RLDITTKYSQAKHAVLFSTDVAARGLDFPAVDWVIQLDCPEDADTYIHRVGRTARYERDG 390
Query: 730 EGVLLLAPWEEY-FLDDL--KDLPLDKLQL-PHLNPEIQLQMDNHMAKIDNNVKEAAYHA 785
VL L P EE L L K +P++K+ + + I+ Q+ N M D +K A
Sbjct: 391 RAVLFLDPSEEQGMLKRLEQKKVPVEKINVKANKQQSIKNQLQN-MCFKDPELKYLGQKA 449
Query: 786 WLGYYNSI-----REIGRDKTTLVELANKFAQSIGLQRPP 820
++ Y S+ +EI + K +E +FA S+GL P
Sbjct: 450 FISYVKSVYVQKDKEIFKLKDLDLE---EFASSLGLPGAP 486
>gi|429462585|ref|YP_007184048.1| ATP-dependent RNA helicase RhlE [Candidatus Kinetoplastibacterium
crithidii (ex Angomonas deanei ATCC 30255)]
gi|429338099|gb|AFZ82522.1| ATP-dependent RNA helicase RhlE [Candidatus Kinetoplastibacterium
crithidii (ex Angomonas deanei ATCC 30255)]
Length = 435
Score = 214 bits (546), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 135/411 (32%), Positives = 217/411 (52%), Gaps = 41/411 (9%)
Query: 367 KEKREEEPILSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTG 426
KEKRE + Q FD G+ L + ++ + GY T +QE + L G+D + A+TG
Sbjct: 2 KEKRENKN--KQILFDSFGLDQLLLNSINSIGYDTPTAIQEKAIPFILNGRDVLGAAQTG 59
Query: 427 TGKSIAFLLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIG 486
TGK+ AF+LP I +L +SST+ + VLIL PTRELA+Q+ + KN + +
Sbjct: 60 TGKTAAFVLPIINKILPYANSSTSPARHLLRVLILVPTRELANQVYDSVVIYSKNTN-LR 118
Query: 487 VLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHL 546
+ L GG + L+ C+ILVATPGRL+ HIE ++ L +++ VLDEAD +
Sbjct: 119 SVVLFGGADHYNQENNLKLG-CEILVATPGRLIAHIEQG---NLHLQNIEIFVLDEADRM 174
Query: 547 LDLGFRKDVENIVDCLPRRRQSLLFSATMPKELVLKREHTYIDTVGLGSVETPVK----- 601
LD+GF D++ I+ LP+ RQ+L FSAT K ++ +G+ ++ PV+
Sbjct: 175 LDMGFMPDIDKIISKLPKNRQTLFFSATFSK---------FMRKIGMSYLKDPVELDITS 225
Query: 602 -------IKQSCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREM 654
++Q + P+ + + +L +L T +I+F +T + T L LR
Sbjct: 226 PNSIADNVEQLSYIVPNRFKMEAVVSILTARVLET----IIIFTNTKLSTIKLTSFLRSS 281
Query: 655 KMNVREMYSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQ 714
+ ++ K QL R + E F+ +LV +DV+ARG+D ++ V+ IP E
Sbjct: 282 NIQCDSIHGDKSQLERTAVLESFKNGILRVLVATDVAARGLDVLGISCVINFDIPHSPED 341
Query: 715 YIHRLGRTGREGKEGEGV---------LLLAPWEEYFLDDLKDLPLDKLQL 756
Y+HR+GRTGR G + +LL+ E++ + LPL++++L
Sbjct: 342 YVHRIGRTGRANNTGVAISLISNDEEDVLLSSIEKFTDSTILRLPLNQMKL 392
>gi|33598065|ref|NP_885708.1| ATP-dependent RNA helicase [Bordetella parapertussis 12822]
gi|33566623|emb|CAE38832.1| putative ATP-dependent RNA helicase [Bordetella parapertussis]
Length = 477
Score = 214 bits (546), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 140/396 (35%), Positives = 208/396 (52%), Gaps = 35/396 (8%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
+ F + G+ PL +K++ GY T +Q + +EG+D + A+TGTGK+ AF LP +
Sbjct: 17 RTFADFGLHPLLLKSIADTGYTNPTPIQAQAIPVVVEGRDVMGAAQTGTGKTAAFTLPIL 76
Query: 439 EAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
++ ++S + P+ LIL PTRELA Q+ E++ H + + GG
Sbjct: 77 HRLMPLANTSASPARHPVRALILTPTRELADQVY-ESVKRYSLHTPLRSAVVFGGVDIGP 135
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
+ L C++LVATPGRLLDH+E K+ V L + +LVLDEAD +LD+GF D+E I
Sbjct: 136 QKEALRRG-CEVLVATPGRLLDHVEQKN---VNLSQVGILVLDEADRMLDMGFLPDLERI 191
Query: 559 VDCLPRRRQSLLFSATMPKELVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQIL 618
+ LP +RQ LLFSAT E I +G + PV+I+ + A + QI
Sbjct: 192 IRLLPAQRQGLLFSATFSNE---------IRKLGRSYLNHPVEIEVAARNATADTVTQIA 242
Query: 619 H------------HLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKP 666
+ HL+K L +VIVF +T + T+ L L + ++ K
Sbjct: 243 YQMHGDTKRAAVVHLVKSRGL----KQVIVFSNTKIGTARLARQLERDGVKAESIHGDKT 298
Query: 667 QLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREG 726
Q R + E F+A +LV +DV+ARG+D V V+ +P + E Y+HR+GRTGR G
Sbjct: 299 QGDRMKALEAFKAGDLEVLVATDVAARGLDVAGVPCVINYDLPYNAEDYVHRIGRTGRAG 358
Query: 727 KEGEGVLLLAPWEEYFLDDLKDL-----PLDKLQLP 757
GE + L EE +L D++ L P KL+LP
Sbjct: 359 ASGEAIALFTADEERYLLDIEKLIKRQVPRGKLELP 394
>gi|56477991|ref|YP_159580.1| ATP-dependent RNA helicase [Aromatoleum aromaticum EbN1]
gi|56314034|emb|CAI08679.1| ATP-dependent RNA helicase [Aromatoleum aromaticum EbN1]
Length = 491
Score = 214 bits (546), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 134/383 (34%), Positives = 211/383 (55%), Gaps = 18/383 (4%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F + G+ P ++A+ +GY T +Q+ + L G+D + A+TGTGK+ F LP ++
Sbjct: 3 FADLGLIPELLRAVAESGYTTPTPIQQQAIPVVLSGRDVMGGAQTGTGKTAGFTLPLLQR 62
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+ + S+ST+ P+ LIL PTRELA Q+ E++ + + + GG K
Sbjct: 63 LARHASTSTSPARHPVRALILAPTRELAMQVF-ESVKTYSKYVPLRSTCIYGGVDMKPQI 121
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
+ L + +I+VATPGRLLDH++ K+ ++L ++MLVLDEAD +LD+GF D+ I+D
Sbjct: 122 QDLRNG-IEIVVATPGRLLDHVQQKT---IQLGQVEMLVLDEADRMLDMGFIPDIRRILD 177
Query: 561 CLPRRRQSLLFSATMPKEL-----VLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHF 615
LP RQSLLFSAT E+ + +E I+ V + + + A L
Sbjct: 178 LLPAARQSLLFSATFSDEIKKLADQMLKEPQLIEVARRNMVSETITHRVHPVSA--GLKR 235
Query: 616 QILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISE 675
+L HLL+ PD + +VF +T + S L L + ++ K Q R E
Sbjct: 236 NLLAHLLRHE----PDTQALVFVATKLACSRLAHFLERHGIAADAIHGDKGQAQRTDTLE 291
Query: 676 EFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLL 735
F++ K +LV +DV+ARG+D D+ SV+ +P E Y+HR+GRTGR G++G V L+
Sbjct: 292 AFKSGKLRVLVATDVAARGLDIDDLPSVINFELPHTAEDYVHRIGRTGRAGRQGNAVSLV 351
Query: 736 APWEEYFLDDLKDLPLDKLQLPH 758
+ E + L +++ L KLQ+P
Sbjct: 352 SAEERHHLAEIEK--LIKLQIPQ 372
>gi|410897405|ref|XP_003962189.1| PREDICTED: ATP-dependent RNA helicase DDX18-like [Takifugu
rubripes]
Length = 649
Score = 214 bits (546), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 155/453 (34%), Positives = 249/453 (54%), Gaps = 37/453 (8%)
Query: 386 ISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKAT 445
+S T+K + G+ QMT +Q T+ LEG+D + AKTG+GK++AFL+P IE + K
Sbjct: 164 VSESTLKGVKELGFEQMTEIQHKTIRPLLEGRDVLAAAKTGSGKTLAFLIPCIELIYK-- 221
Query: 446 SSSTTQLVP--PIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRL 503
+ +P V+IL PTRELA Q L+ +H L ++GG+ + +RL
Sbjct: 222 ----LKFMPRNGTGVVILSPTRELAMQTYGVLKELMTHHVHTYGL-IMGGSNRSAEAQRL 276
Query: 504 ESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLP 563
++ ILVATPGRLLDH++N G + L+ L++DEAD +L++GF ++++ I+ LP
Sbjct: 277 -ANGVNILVATPGRLLDHLQNTPGFMFK--NLQCLIIDEADRILEVGFEEELKQIIKLLP 333
Query: 564 RRRQSLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQI 617
+RRQ+LLFSAT + + LK+E Y+ T ++Q +V P E F +
Sbjct: 334 KRRQTLLFSATQTRRVEDLARISLKKEPLYVGVDDDKEKATVDGLEQGYVVCPSEKRFLL 393
Query: 618 LHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEF 677
L LK++ K++VF S+ M Y LL + + V ++ ++ Q R +F
Sbjct: 394 LFTFLKKN----RKKKLMVFFSSCMSVKYHYELLNYIDLPVMAIHGKQKQTKRTTTFFQF 449
Query: 678 RASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEG--VLLL 735
+ IL+ +DV+ARG+D P+V ++Q P D ++YIHR+GRT R G EG G +L+L
Sbjct: 450 CNADSGILLCTDVAARGLDIPEVDWIIQYDPPDDPKEYIHRVGRTAR-GIEGRGHALLIL 508
Query: 736 APWEEYFLDDLKD--LPLDKLQLPHLN-PEIQLQMDNHMAK---IDNNVKEAAYHAWLGY 789
P E FL LK +PL + + +IQ Q++ + K + + +E AY +++
Sbjct: 509 RPEELGFLRYLKQAKVPLSEFEFSWSKISDIQSQLEKLIEKNYYLHKSAQE-AYKSYVRA 567
Query: 790 YN--SIREIGRDKTTLVELANKFAQSIGLQRPP 820
Y+ S+++I T + + A S G + PP
Sbjct: 568 YDSHSLKQIYNVNTLNLLMV---ALSFGFKVPP 597
>gi|327273954|ref|XP_003221744.1| PREDICTED: probable ATP-dependent RNA helicase DDX10-like [Anolis
carolinensis]
Length = 851
Score = 214 bits (546), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 145/430 (33%), Positives = 237/430 (55%), Gaps = 35/430 (8%)
Query: 380 RFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIE 439
RF + +S T+K L A Y +T +Q T+ L GKD + AKTG+GK++AF++PA+E
Sbjct: 69 RFSDFPLSKKTLKGLQEAQYRMVTEIQRQTIGLALLGKDVLGAAKTGSGKTLAFIVPALE 128
Query: 440 AVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVD 499
+ + +ST L VLI+ PTRELA Q + KNHD L ++GG K +
Sbjct: 129 ILYRQQWTSTDGL----GVLIISPTRELAYQTFEVLRKVGKNHDFSAGL-VIGGKDLKQE 183
Query: 500 QRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIV 559
R+ + IL+ TPGRLL H++ S L+ML+LDEAD +LD+GF + I+
Sbjct: 184 ADRIHN--INILICTPGRLLQHMDETSYFYAS--DLQMLILDEADRILDMGFADTMNAII 239
Query: 560 DCLPRRRQSLLFSATMPKEL-----VLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELH 614
+ LP++RQ+LLFSAT K + + ++ Y+ TP ++Q+ +V ELH
Sbjct: 240 ENLPKKRQTLLFSATQTKSVKDLARLSLKDPEYVWVHEKAKFSTPATLEQNYIVC--ELH 297
Query: 615 FQI--LHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK--MNVREMYSRKPQLYR 670
+I L+ L+ H+ + K IVF ++ L+ + ++ + + ++ ++ Q+ R
Sbjct: 298 QKISMLYSFLRSHL----NKKSIVFFASCKEVQYLFRVFCRLRPGLPILALHGKQQQMKR 353
Query: 671 DRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGE 730
+ +F K +L +D++ARG+D+P V V+Q P D YIHR+GRT R + GE
Sbjct: 354 MEVYTDFVRKKSAVLFATDLAARGLDFPAVNWVIQFDCPEDANTYIHRVGRTARYKEGGE 413
Query: 731 GVLLLAPWEEY-FLDDL--KDLPLDKLQLPHLNPE----IQLQMDNHMAKIDNNVKEAAY 783
+L+L EE + L K +P++K++ +NPE IQ ++ + +A+ D +KE A
Sbjct: 414 ALLVLIKSEENGMIQQLSQKKVPINKIK---INPEKLVDIQKKLQSFLAQ-DQELKERAQ 469
Query: 784 HAWLGYYNSI 793
++ Y S+
Sbjct: 470 RCFVSYLRSV 479
>gi|118572555|sp|Q0UR48.1|HAS1_PHANO RecName: Full=ATP-dependent RNA helicase HAS1
Length = 610
Score = 214 bits (546), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 158/460 (34%), Positives = 242/460 (52%), Gaps = 39/460 (8%)
Query: 380 RFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIE 439
RFDE +S T++A+ G+ MT +Q + L GKD + AKTG+GK++AFL+PAIE
Sbjct: 132 RFDELNLSERTMEAIKTMGFESMTEIQRKAIPPLLSGKDVLGAAKTGSGKTLAFLIPAIE 191
Query: 440 AVLKATSSSTTQLVP--PIYVLILCPTRELASQIAAEAIALLKNHD-GIGVLTLVGGTRF 496
+ S+ + P V+++ PTRELA QI A L++ H G+ ++GG
Sbjct: 192 ML------SSMRFKPRNGTGVIVVSPTRELALQIFGVARELMEKHSQTFGI--VIGGANR 243
Query: 497 KVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVE 556
+ + +L + +L+ATPGRLLDH+ N G + LK L++DEAD +L++GF ++
Sbjct: 244 RAEAEKL-AKGVNLLIATPGRLLDHLHNTQGFVFK--NLKSLIIDEADRILEVGFEDEMR 300
Query: 557 NIVDCLPRRRQSLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSCLVAP 610
+I+ LP RQ++LFSAT + + LK YI+ T ++Q ++
Sbjct: 301 SIIKILPTDRQTMLFSATQTTKVEDLARISLKAGPLYINVDYRKEHSTVEGLEQGYVICD 360
Query: 611 HELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYR 670
+ F++L LK+H KVIVF S+ LL + + V E++ + Q R
Sbjct: 361 SDTRFRLLFSFLKKH----QKKKVIVFFSSCNSVKFYAELLNYIDLPVLELHGKLKQQAR 416
Query: 671 DRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGE 730
EF ++ L+ +DV+ARG+D P+V V+Q P D YIHR+GRT R G EG+
Sbjct: 417 TNRFFEFCNAQSGTLICTDVAARGLDIPEVDWVIQFDPPDDPRDYIHRVGRTAR-GSEGK 475
Query: 731 G--VLLLAPWEEYFLDDLKD--LPLDKLQLPH---LNPEIQLQMDNHMAKIDNNVKEAAY 783
G ++ L P E FL LK+ +PL + +LP LN + QL+ N + Y
Sbjct: 476 GRSLMFLLPSEIGFLKLLKEARVPLVEFELPANKILNIQSQLEALITKNYYLNKSAKDGY 535
Query: 784 HAWLGYY--NSIREI-GRDKTTLVELANKFAQSIGLQRPP 820
++L Y +S+R + K LV K A+S G PP
Sbjct: 536 RSYLQAYASHSLRSVFDVHKLDLV----KVAKSFGFSTPP 571
>gi|392402594|ref|YP_006439206.1| DEAD/DEAH box helicase domain protein [Turneriella parva DSM 21527]
gi|390610548|gb|AFM11700.1| DEAD/DEAH box helicase domain protein [Turneriella parva DSM 21527]
Length = 473
Score = 214 bits (546), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 147/422 (34%), Positives = 222/422 (52%), Gaps = 35/422 (8%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
K F E G+SP ++A+T G+ + + +QE + LEG D + +A+TGTGK+ AF +P I
Sbjct: 2 KSFYELGLSPALVQAITDMGFREASPIQEKAIPILLEGHDLIGQAQTGTGKTAAFAIPVI 61
Query: 439 EAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
E K TS+ Q ++LCPTRELA Q+AAE LLK I V T+ GG +
Sbjct: 62 E---KITSAKELQ------AMVLCPTRELAMQVAAEFKKLLKYKKDILVATVYGGQQIGT 112
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
R L+ P QI+V TPGR++DH+ K+ +++ +K VLDEAD +L GFR+D+E+I
Sbjct: 113 QFRDLKLKP-QIVVGTPGRVMDHMRRKT---IKMNTVKFFVLDEADEMLAQGFREDIEHI 168
Query: 559 VDCLPRRRQSLLFSATMPKELVLKREHTYIDT-----VGLGSVETPVKIKQSCLVAPHEL 613
+ P+ RQ++LFSATM KE +L +++ V G P KI+Q L+ P +
Sbjct: 169 LLDAPKERQTVLFSATMSKE-ILAITSQFLNNPQRADVLAGQSNKP-KIEQFFLLVPEKN 226
Query: 614 HFQILHHLLKEHILGTPDYK-VIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDR 672
+ L+ + D+K ++F + L E M ++ Q RD+
Sbjct: 227 RVEATIRLMDFY-----DFKSALIFSNMRSQVDSLTQQFNERGMTAEGIHGDLNQNQRDK 281
Query: 673 ISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGV 732
+ + R+ + +LV +DV+ RG+D + +V +P D E YIHR+GRTGR GK G
Sbjct: 282 VMGKLRSGQARLLVATDVAGRGIDISHIEAVFNFDLPRDVEDYIHRIGRTGRAGKSGRSF 341
Query: 733 LLLAPWEEYFLDDLKDLPLDKLQ----LPHLNPEIQLQMDNHMAKIDNNVKEAAYHAWLG 788
+ P E L+ LK L+KL LPH P + ++ + + E A L
Sbjct: 342 SFVRPTE---LNKLKR--LEKLHSIRILPHDVPAAEALQKKKVSALLGEIGEVTKRAKLA 396
Query: 789 YY 790
Y
Sbjct: 397 QY 398
>gi|350412881|ref|XP_003489799.1| PREDICTED: probable ATP-dependent RNA helicase pitchoune-like
[Bombus impatiens]
Length = 578
Score = 214 bits (546), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 158/460 (34%), Positives = 257/460 (55%), Gaps = 39/460 (8%)
Query: 390 TIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSST 449
T+KA+ G+ MT +Q + LEG+D V AKTG+GK++AFL+PA+E + K
Sbjct: 116 TLKAIQDMGFTNMTEIQAKAIPPLLEGRDLVGSAKTGSGKTLAFLIPAVELIYK------ 169
Query: 450 TQLVP--PIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDP 507
+ +P +I+ PTREL+ Q L+K H L L+GG + + ++L +
Sbjct: 170 LKFMPRNGTGCIIISPTRELSMQTFGVLKELMKYHYHTYGL-LMGGANRQTEAQKL-AKG 227
Query: 508 CQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQ 567
I+VATPGRLLDH++N + + L+ LV+DEAD +LD+GF ++++ I++ LP++R
Sbjct: 228 INIIVATPGRLLDHLQNTADFLYK--NLQCLVIDEADRILDIGFEEELKQIINILPKKRL 285
Query: 568 SLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILHHL 621
++LFSAT K L LK+E Y+ T ++Q +V P E F +L
Sbjct: 286 TMLFSATQTKRTEMLTTLALKKEPVYVGVDDDKEKATVEGLEQGYVVCPSEKRFLLLFTF 345
Query: 622 LKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEFRASK 681
LK++ KV+VF S+ M + LL + + V ++ ++ Q R +F +
Sbjct: 346 LKKN----RKKKVMVFFSSCMSVKYHHELLNYIDLPVLSIHGKQKQTKRTTTFFQFCNAS 401
Query: 682 RLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGR-EGKEGEGVLLLAPWEE 740
IL+ +DV+ARG+D P V +VQ P D ++YIHR+GRT R EG G +L+L P E
Sbjct: 402 SGILLCTDVAARGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHALLILRPEEL 461
Query: 741 YFLDDLKD--LPLDKLQLP-HLNPEIQLQMDNHMAK---IDNNVKEAAYHAWLGYYNS-- 792
FL LK +P+++ + +IQLQ++ ++K ++ + KE A+ A++ Y+S
Sbjct: 462 GFLRYLKQARVPVNEFDFSWNKIADIQLQLEKLVSKNYFLNMSAKE-AFKAYVRAYDSHH 520
Query: 793 IREIGRDKTTLVELANKFAQSIGLQRPPPLFRKTALKMGL 832
+++I +T V+L+ K A+S G PP + LK+G+
Sbjct: 521 LKQIFDIET--VDLS-KVAKSFGFVVPPAV----DLKVGI 553
>gi|284035184|ref|YP_003385114.1| DEAD/DEAH box helicase [Spirosoma linguale DSM 74]
gi|283814477|gb|ADB36315.1| DEAD/DEAH box helicase domain protein [Spirosoma linguale DSM 74]
Length = 643
Score = 214 bits (546), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 129/368 (35%), Positives = 204/368 (55%), Gaps = 19/368 (5%)
Query: 377 SQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLP 436
+Q F ISP ++A+T G+I + +Q + L+G+D + +A+TGTGK+ AF +P
Sbjct: 29 NQLLFSSLAISPELLQAVTDMGFISPSPIQAEAIPPILDGRDVIGQAQTGTGKTAAFGIP 88
Query: 437 AIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRF 496
A++ + S T LILCPTRELA Q+A E L K GI + + GG
Sbjct: 89 ALDLIDVQDRSVQT--------LILCPTRELALQVAEEIKKLAKYKRGIRIEAIYGGDSI 140
Query: 497 KVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVE 556
+ R L+S I++ TPGR++DH+E + ++L +KM++LDEAD +LD+GFR+D+E
Sbjct: 141 ERQIRSLKS-GVHIVIGTPGRVMDHMERNT---LKLNNVKMMILDEADEMLDMGFREDIE 196
Query: 557 NIVDCLPRRRQSLLFSATMPKELVLKREHTYIDTVGLGSVE---TPVKIKQSCLVAPHEL 613
+I++ +P RQ++LFSATM K ++ + D V + V+ T V I+Q +
Sbjct: 197 SILEEMPEERQTILFSATMSKPIMQITQKFQKDPVLVKVVKKELTNVNIEQVYFEVKSKA 256
Query: 614 HFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRI 673
+++ L+ + L ++VFC+T + L+ ++ Q R+ +
Sbjct: 257 KVEVMCRLIDMYDLKL----LLVFCNTKRKVDEIVEDLQIRGYQAEGLHGDLRQAQRNNV 312
Query: 674 SEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVL 733
+FRA ILV +DV+ARG+D DV +V+ IP D E Y+HR+GRTGR GK G
Sbjct: 313 MSKFRAGTTNILVATDVAARGIDVDDVDAVINFDIPLDEEYYVHRIGRTGRAGKSGRAFS 372
Query: 734 LLAPWEEY 741
+ E+Y
Sbjct: 373 FVGRDEKY 380
>gi|149238155|ref|XP_001524954.1| ATP-dependent RNA helicase DDX18 [Lodderomyces elongisporus NRRL
YB-4239]
gi|152032522|sp|A5E2Z9.1|HAS1_LODEL RecName: Full=ATP-dependent RNA helicase HAS1
gi|146451551|gb|EDK45807.1| ATP-dependent RNA helicase DDX18 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 559
Score = 214 bits (546), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 166/489 (33%), Positives = 268/489 (54%), Gaps = 46/489 (9%)
Query: 353 KEISKNKLNGNGEKKEKREEEPILSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSA 412
+E++K K++ E + +EP ++ F++ S T+KA+ G+ +MT+VQ T+
Sbjct: 71 QELTKPKVSNTSEAEA---DEPGVNYS-FEKADFSEPTMKAIKEMGFQKMTKVQAKTIPP 126
Query: 413 CLEGKDAVVKAKTGTGKSIAFLLPAIEAV--LKATSSSTTQLVPPIYVLILCPTRELASQ 470
L G+D + AKTG+GK++AFLLPA+E + LK + T V+I+ PTRELA Q
Sbjct: 127 LLAGRDVLGAAKTGSGKTLAFLLPAVELLYSLKIKPRNGTA------VIIITPTRELALQ 180
Query: 471 IAAEAIALLKNHD-GIGVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLS 529
I A L++ H G++ +GG + + +L + +LVATPGRLLDH++N G
Sbjct: 181 IFGVARQLMEYHSQTCGIV--IGGADRRQEATKL-AKGVNLLVATPGRLLDHLKNTQGFV 237
Query: 530 VRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRR-RQSLLFSATMPKE------LVLK 582
+ LK LV+DEAD +L++GF ++++ I+ LP RQ++LFSAT + + L+
Sbjct: 238 --FLNLKALVIDEADRILEIGFEEEMKQIIKILPNEDRQTMLFSATQTTKVEDLARISLR 295
Query: 583 REHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGM 642
YI+ V V T ++Q +V + F +L LK +I K+IVF S+
Sbjct: 296 PGPLYINVVPEKDVSTADGLEQGYVVCDSDKRFLLLFSFLKRNI----KKKIIVFLSSCN 351
Query: 643 VTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTS 702
LL + + V +++ ++ Q R EF +K+ ILV +DV+ARG+D P V
Sbjct: 352 SVKFYSELLNYIDLPVLDLHGKQKQQKRTNTFFEFCNAKQGILVCTDVAARGLDIPAVDW 411
Query: 703 VVQVGIPPDREQYIHRLGRTGREGKEGEG--VLLLAPWEEYFLDDLK--DLPLDKLQLP- 757
++Q P D YIHR+GRT R G +G+G ++ L P E FL LK ++PL++ + P
Sbjct: 412 IIQFDPPDDPRDYIHRVGRTAR-GTDGKGKSLMFLTPSELGFLRYLKAANVPLNEYEFPA 470
Query: 758 HLNPEIQLQMDNHMAKIDNNVKEAA---YHAWLGYY--NSIREIGR-DKTTLVELANKFA 811
+ +Q Q+ + K + + ++A Y A+L Y +S++ + + DK LV K
Sbjct: 471 NKIANVQSQL-TKLIKTNYLLHQSAKDGYRAYLQAYSSHSLKTVYQIDKLDLV----KVG 525
Query: 812 QSIGLQRPP 820
+S G PP
Sbjct: 526 KSFGFDVPP 534
>gi|344231947|gb|EGV63826.1| DEAD-domain-containing protein [Candida tenuis ATCC 10573]
Length = 552
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 170/522 (32%), Positives = 274/522 (52%), Gaps = 64/522 (12%)
Query: 339 EDEHDFEEQVELIRKEISKNKLNGNGEKKEKREEEPILSQKR------------------ 380
E ++DF+E EL+ + + + + + K+ EE LS R
Sbjct: 32 EVDNDFDEVAELLGENVQDPEAKKSKKSKQVDEE---LSAPRPKVEEVTKSSDDDKDVNF 88
Query: 381 -FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIE 439
FD+ G+S T+KA+ G+ MT+VQ T+ L G+D + AKTG+GK++AFLLPAIE
Sbjct: 89 DFDKVGLSEPTLKAIEDMGFKTMTKVQAKTIPPLLAGRDVLGAAKTGSGKTLAFLLPAIE 148
Query: 440 AV--LKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNH-DGIGVLTLVGGTRF 496
+ LK + T V+++ PTRELA QI A LL +H G+ ++GG
Sbjct: 149 MLYSLKFKPRNGTG------VVVISPTRELALQIFGVARELLAHHTQTFGI--VIGGANR 200
Query: 497 KVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVE 556
+ + +L+ +L+ATPGRLLDH++N G R L+ L++DEAD +L++GF +++
Sbjct: 201 RQEAEKLQKG-VNLLIATPGRLLDHLQNTEGFVFR--NLRALIIDEADRILEIGFEDEMK 257
Query: 557 NIVDCLPR-RRQSLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSCLVA 609
I+ LP+ RQ++LFSAT + + L+ YI+ V + T ++Q +
Sbjct: 258 QIIKILPKEERQTMLFSATQTTKVEDLARISLRPGPLYINVVPETEISTADGLEQGYVTC 317
Query: 610 PHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLY 669
+ F +L LK ++ K+IVF S+ LL + + V +++ ++ Q
Sbjct: 318 ESDKRFLLLFSFLKRNV----KKKIIVFLSSCNCVKYFGELLNYIDLPVLDLHGKQKQQK 373
Query: 670 RDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEG 729
R EF +K+ IL+ +DV+ARG+D P V ++Q P D YIHR+GRT R G +G
Sbjct: 374 RTNTFFEFCNAKQGILICTDVAARGLDIPAVDWIIQFDPPDDPRDYIHRVGRTAR-GTDG 432
Query: 730 EG--VLLLAPWEEYFLDDLK--DLPLDKLQLPHLN-PEIQLQMDNHMAKIDNNVKEAA-- 782
+G ++ L P E FL LK ++PL++ + P +Q Q+ + K + + ++A
Sbjct: 433 KGKSLMFLLPSELGFLRYLKAANVPLNEYEFPTKKIANVQSQL-TKLIKSNYWLHQSAKD 491
Query: 783 -YHAWLGYYNS--IREIGR-DKTTLVELANKFAQSIGLQRPP 820
Y A+L Y S ++ + + DK LV K A+S G PP
Sbjct: 492 GYRAYLQAYASHHLKTVYQIDKLDLV----KVAKSFGFDIPP 529
>gi|311104225|ref|YP_003977078.1| ATP-dependent RNA helicase RhlE 2 [Achromobacter xylosoxidans A8]
gi|310758914|gb|ADP14363.1| ATP-dependent RNA helicase RhlE 2 [Achromobacter xylosoxidans A8]
Length = 493
Score = 214 bits (545), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 135/381 (35%), Positives = 201/381 (52%), Gaps = 30/381 (7%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F + G+ PL ++++ GY T +Q + +EG+D + A+TGTGK+ AF LP +
Sbjct: 19 FTDFGLHPLLLQSIAETGYTTPTPIQAQAIPVVVEGRDVMGAAQTGTGKTAAFTLPILHR 78
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
++ ++S + P+ LIL PTRELA Q+ E++ + + GG +
Sbjct: 79 LMPLANTSASPARHPVRALILTPTRELADQVY-ESVKRYSKQTPLRSAVVFGGVDIGPQK 137
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
L C++LVATPGRLLDH+E K+ V L + +LVLDEAD +LD+GF D+E I+
Sbjct: 138 EALRRG-CEVLVATPGRLLDHVEQKN---VNLSQVGILVLDEADRMLDMGFLPDLERIIR 193
Query: 561 CLPRRRQSLLFSATMPKELVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILH- 619
LP +RQ LLFSAT E I +G + PV+I+ + A QI +
Sbjct: 194 LLPAQRQGLLFSATFSNE---------IRKLGRSYLNHPVEIEVAARNATANTITQIAYK 244
Query: 620 -----------HLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQL 668
HL+K L +VIVF +T + T+ L L + ++ K Q
Sbjct: 245 MPSDAKRAAVVHLVKSRGLN----QVIVFSNTKIGTARLARDLERDGVKAESIHGDKTQA 300
Query: 669 YRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKE 728
R + E F+A + +LV +DV+ARG+D V V+ +P + E Y+HR+GRTGR G
Sbjct: 301 DRMKALEAFKAGELEVLVATDVAARGLDVAGVPCVINYDLPYNAEDYVHRIGRTGRAGAS 360
Query: 729 GEGVLLLAPWEEYFLDDLKDL 749
GE + L P EE FL D++ L
Sbjct: 361 GEAIALFTPDEERFLLDIEKL 381
>gi|255721553|ref|XP_002545711.1| hypothetical protein CTRG_00492 [Candida tropicalis MYA-3404]
gi|240136200|gb|EER35753.1| hypothetical protein CTRG_00492 [Candida tropicalis MYA-3404]
Length = 770
Score = 214 bits (545), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 144/460 (31%), Positives = 246/460 (53%), Gaps = 34/460 (7%)
Query: 380 RFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIE 439
+F + I+ T+K L + ++ +T +Q+ T+ L+G+D + A+TG+GK++AFL+P IE
Sbjct: 49 QFSDLPITENTLKGLKESTFVSLTDIQKKTIPIALKGEDLMGTARTGSGKTLAFLVPTIE 108
Query: 440 AVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVD 499
++++ + L LI+ PTRELA QI E + + ++ + GG + +
Sbjct: 109 SLIRNKITEYDGLA----ALIISPTRELAVQIF-EVLTKIGRNNSFSAGLVTGGKDVQYE 163
Query: 500 QRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIV 559
+ R+ ILV TPGR+ H+ G+ L++LVLDEAD LD+GFRK ++NI+
Sbjct: 164 KERVSR--MNILVGTPGRISQHLNEAVGMETS--NLQVLVLDEADRCLDMGFRKQIDNIL 219
Query: 560 DCLPRRRQSLLFSATMPKEL--VLKREHTYIDTVGLGSVE----TPVKIKQSCLVAPHEL 613
LP RQ+LLFSAT + + + + T +G+ S + TP + Q + P +
Sbjct: 220 GHLPTTRQTLLFSATQSESVKDLARLSLTNPKKIGVSSDQEISATPESLDQYYVKVPLDE 279
Query: 614 HFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK--MNVREMYSRKPQLYRD 671
+L +K H+ K++VF S+ Y R ++ +++ ++Y R Q R
Sbjct: 280 KLDVLWSFIKSHLKS----KILVFFSSSKQVQFAYETFRTLQPGISLMKLYGRHKQTARL 335
Query: 672 RISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEG 731
+++F ++ L +D+ ARG+D+P + VVQV P D Y+HR+GR+ R G++G+
Sbjct: 336 ETTKKFSQAQHACLFATDIVARGLDFPAIDWVVQVDCPEDSATYVHRVGRSARFGRQGKS 395
Query: 732 VLLLAPWEEYFLDDLKDLPLDKLQLPHLN------PEIQLQMDNHMAKIDNNVKEAAYHA 785
+L+L P EE + LK L + K++ +N I+ Q+ + K D +K A
Sbjct: 396 LLMLLPSEEEGM--LKRLKIHKIEPKFMNIKQKSKKSIRPQLQSLCFK-DPVMKNLGQRA 452
Query: 786 WLGYYNSIREIGRDKTT--LVEL-ANKFAQSIGLQRPPPL 822
++ Y+ SI I +DK + EL A +A S+GL P +
Sbjct: 453 FIAYFKSIY-IQKDKDVFKVEELPAEAYAASLGLPGAPKI 491
>gi|195390289|ref|XP_002053801.1| GJ23143 [Drosophila virilis]
gi|194151887|gb|EDW67321.1| GJ23143 [Drosophila virilis]
Length = 670
Score = 214 bits (545), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 148/453 (32%), Positives = 249/453 (54%), Gaps = 35/453 (7%)
Query: 385 GISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKA 444
+S T++A+ G+ +MT +Q +L+ L+G+D V A+TG+GK++AFL+PA+E + K
Sbjct: 184 AVSEATLQAIAEMGFSEMTEIQAKSLTPLLKGRDLVGAAQTGSGKTLAFLIPAVELINK- 242
Query: 445 TSSSTTQLVP--PIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRR 502
+ +P V+I+ PTREL+ Q L+ +H L + GG+ +V+ +
Sbjct: 243 -----LRFMPRNGTGVIIISPTRELSMQTFGVLKELMAHHHHTYGLVM-GGSNRQVESEK 296
Query: 503 LESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCL 562
L ILVATPGRLLDH++N + L+ L++DE D +L++GF ++++ I++ L
Sbjct: 297 L-GKGINILVATPGRLLDHLQNSPDFLYK--NLQCLIIDEVDRILEIGFEEELKQIINLL 353
Query: 563 PRRRQSLLFSATMPK------ELVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQ 616
P+RRQ++LFSAT + +L LK+E Y+ T ++Q +V P E
Sbjct: 354 PKRRQTMLFSATQTERIDALSKLALKKEPIYVGVHDNQETATVEGLEQGYIVCPSEKRLL 413
Query: 617 ILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEE 676
+L LK++ KV+VF S+ M + L + + V ++ ++ Q R +
Sbjct: 414 VLFTFLKKN----RKKKVMVFFSSCMSVKYHHELFNYIDLPVTSIHGKQKQTKRTSTFFQ 469
Query: 677 FRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGR-EGKEGEGVLLL 735
F ++ IL+ +DV+ARG+D P V +VQ P D +YIHR+GRT R G G +L+L
Sbjct: 470 FCNAESGILLCTDVAARGLDIPQVDWIVQYDPPDDPREYIHRVGRTARGSGTSGHALLML 529
Query: 736 APWEEYFLDDLK--DLPLDKLQLPHLN-PEIQLQMDNHMAK---IDNNVKEAAYHAWLGY 789
P E FL LK +PL++ + +IQLQ++ +AK ++ + KE A+ +++
Sbjct: 530 RPEELGFLRYLKAAKVPLNEFEFSWQKIADIQLQLEKLIAKNYFLNQSAKE-AFKSYVRA 588
Query: 790 YNS--IREIGRDKTTLVELANKFAQSIGLQRPP 820
Y+S +++I T ++ +K S G PP
Sbjct: 589 YDSHQLKQIFNVNTLDLQAVSK---SFGFLVPP 618
>gi|340721973|ref|XP_003399387.1| PREDICTED: probable ATP-dependent RNA helicase pitchoune-like
[Bombus terrestris]
Length = 579
Score = 214 bits (545), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 154/450 (34%), Positives = 252/450 (56%), Gaps = 35/450 (7%)
Query: 390 TIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSST 449
T+KA+ G+ MT +Q + LEG+D V AKTG+GK++AFL+PA+E + K
Sbjct: 116 TLKAIEDMGFTNMTEIQAKAIPPLLEGRDLVGSAKTGSGKTLAFLIPAVELIYK------ 169
Query: 450 TQLVP--PIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDP 507
+ +P +I+ PTREL+ Q L+K H L L+GG + + ++L +
Sbjct: 170 LKFMPRNGTGCIIISPTRELSMQTFGVLKELMKYHYHTYGL-LMGGANRQTEAQKL-AKG 227
Query: 508 CQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQ 567
I+VATPGRLLDH++N + + L+ LV+DEAD +LD+GF ++++ I++ LP++R
Sbjct: 228 INIIVATPGRLLDHLQNTADFLYK--NLQCLVIDEADRILDIGFEEELKQIINILPKKRL 285
Query: 568 SLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILHHL 621
++LFSAT K L LK+E Y+ T ++Q +V P E F +L
Sbjct: 286 TMLFSATQTKRTEMLTTLALKKEPVYVGVDDDKEKATVEGLEQGYVVCPSEKRFLLLFTF 345
Query: 622 LKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEFRASK 681
LK++ KV+VF S+ M + LL + + V ++ ++ Q R +F +
Sbjct: 346 LKKN----RKKKVMVFFSSCMSVKYHHELLNYIDLPVLSIHGKQKQTKRTTTFFQFCNAS 401
Query: 682 RLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGR-EGKEGEGVLLLAPWEE 740
IL+ +DV+ARG+D P V +VQ P D ++YIHR+GRT R EG G +L+L P E
Sbjct: 402 SGILLCTDVAARGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHALLILRPEEL 461
Query: 741 YFLDDLKD--LPLDKLQLP-HLNPEIQLQMDNHMAK---IDNNVKEAAYHAWLGYYNS-- 792
FL LK +P+++ + +IQLQ++ ++K ++ + KE A+ A++ Y+S
Sbjct: 462 GFLRYLKQARVPVNEFDFSWNKIADIQLQLEKLVSKNYFLNMSAKE-AFKAYVRAYDSHH 520
Query: 793 IREIGRDKTTLVELANKFAQSIGLQRPPPL 822
+++I +T ++L+ K A+S G PP +
Sbjct: 521 LKQIFDIET--LDLS-KVAKSFGFVVPPAV 547
>gi|328870453|gb|EGG18827.1| putative RNA helicase [Dictyostelium fasciculatum]
Length = 897
Score = 214 bits (545), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 152/470 (32%), Positives = 243/470 (51%), Gaps = 26/470 (5%)
Query: 363 NGEKKEKREEEPILSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVK 422
N +KK + + + +F++ IS LT+K L YI MT +Q +++ L G+D +
Sbjct: 114 NDDKKNEEYKISYSAASKFNQLPISKLTMKGLDEKKYIDMTDIQRSSIPHSLCGRDILGA 173
Query: 423 AKTGTGKSIAFLLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNH 482
AKTG+GK++AF++P +E + + ++ + + +IL PTRELA QI K H
Sbjct: 174 AKTGSGKTLAFIVPMLELLYR----NSWNIEDGVGAIILSPTRELAIQIFDVLRDAGKYH 229
Query: 483 DGIGVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDE 542
L ++GG VD + + + IL+ATPGRLL H++ G R L+ML+LDE
Sbjct: 230 SFSAGL-IIGGKN--VDNEKKKINEMNILIATPGRLLQHMDETEGF--RCNNLQMLILDE 284
Query: 543 ADHLLDLGFRKDVENIVDCLPRRRQSLLFSATMPKEL-----VLKREHTYIDTVGLGSVE 597
AD +LD GF K + +IV LP RQ+LLFSAT K + + RE Y+ +
Sbjct: 285 ADRILDFGFTKTLNSIVQNLPSSRQTLLFSATQTKSVKDLARLSLREPEYVSVYDRDLMS 344
Query: 598 TPVKIKQSCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMN 657
TP + Q+ + + E +L+ L H+ K IVF +T +Y +
Sbjct: 345 TPANLTQTVMFSTLEDKINLLYSFLHSHLTK----KTIVFLTTCKQVRFIYETFYLINPG 400
Query: 658 VR--EMYSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQY 715
R +++ + Q R + ++F K L +DV+ARG+D+P V V+Q+ P D Y
Sbjct: 401 CRLFQLHGKMKQTSRLDVFQQFCDEKMGTLFATDVAARGLDFPTVDWVIQMDCPDDIATY 460
Query: 716 IHRLGRTGREGKEGEGVLLLAPWEEYFLDDLKDLPLDKLQLPHLNPEIQLQMDNHMAKID 775
IHR+GRT R EG + +L P E+ F+ ++ + Q+ NPE + + +A I
Sbjct: 461 IHRVGRTARNNTEGNSLTVLLPTEKPFIKLMEKQNIHH-QILETNPEKSINIQPKLAAIL 519
Query: 776 N---NVKEAAYHAWLGYYNSI-REIGRDKTTLVELANK-FAQSIGLQRPP 820
+ ++K A A++ Y SI R+ ++ +L L K F+ S+GL P
Sbjct: 520 SEKVDLKYLAQKAFITYVKSIYRQDNKEVFSLEGLDLKAFSNSMGLPGAP 569
>gi|315045866|ref|XP_003172308.1| ATP-dependent RNA helicase DBP4 [Arthroderma gypseum CBS 118893]
gi|311342694|gb|EFR01897.1| ATP-dependent RNA helicase DBP4 [Arthroderma gypseum CBS 118893]
Length = 818
Score = 214 bits (545), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 161/498 (32%), Positives = 253/498 (50%), Gaps = 43/498 (8%)
Query: 367 KEKREEEPILSQKR-------------FDECGISPLTIKALTAAGYIQMTRVQEATLSAC 413
K KR E+ I S K+ F + +S T L+A+ + ++T +Q +
Sbjct: 25 KRKRNEDDIASLKQRVVELDTKAAIESFTDLPLSEATRLGLSASHFKELTDIQSRAIPHA 84
Query: 414 LEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAA 473
L+G+D + AKTG+GK++AFL+P +E + + + L +I+ PTRELA QI
Sbjct: 85 LQGRDILGAAKTGSGKTLAFLVPVLENLFRKQWTEYDGL----GAMIISPTRELAIQIF- 139
Query: 474 EAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLM 533
E + + H ++GG + +Q RL ILV TPGR+L H++ +
Sbjct: 140 EVLRKIGRHHTFSAGLVIGGKSLQEEQERLGR--MNILVCTPGRMLQHMDQTAAFDTD-- 195
Query: 534 GLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQSLLFSATMPKEL-----VLKREHTYI 588
++MLVLDEAD ++D+GF+ V+ IV+ LP+ RQ++LFSAT K++ + ++ YI
Sbjct: 196 NIQMLVLDEADRIMDMGFQSTVDAIVEHLPKERQTMLFSATQTKKVSDLARLSLQDPEYI 255
Query: 589 DTVGLGSVETPVKIKQSCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLY 648
S TP ++Q +V P L ++ + K+IVF S+ +Y
Sbjct: 256 SVHEAASSATPSTLQQHYVVTPLPDKLDTLWSFIRSSVKS----KIIVFFSSSKEVRFVY 311
Query: 649 LLLREMK--MNVREMYSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQV 706
R+M+ + + ++ R+ Q R I+ +F ASK L +DV ARG+D+P V V+Q+
Sbjct: 312 EAFRQMQPGIPLLHLHGRQKQGARLDITHKFSASKNSCLFATDVVARGLDFPAVDWVIQL 371
Query: 707 GIPPDREQYIHRLGRTGREGKEGEGVLLLAPWEEY-FLDDL--KDLPLDKLQL-PHLNPE 762
P D + YIHR+GRT R ++G VL L P EE L L K +P++K+ + +
Sbjct: 372 DCPEDSDTYIHRVGRTARYERDGRAVLFLDPSEEIGMLSRLEQKKIPIEKINIRANKQQS 431
Query: 763 IQLQMDNHMAKIDNNVKEAAYHAWLGYYNSIREIGRDKTTLVELA---NKFAQSIGLQRP 819
I+ Q+ N M D +K A+ Y SI I +DK A +FA S+GL
Sbjct: 432 IKHQLQN-MCFKDPQLKYLGQKAFTSYVKSIY-IQKDKEVFDVKALPLEEFAASLGLPGA 489
Query: 820 PPL-FRKTALKMGLKDIP 836
P + F K LK+ P
Sbjct: 490 PRIKFIKGEDTKSLKNAP 507
>gi|302306975|ref|NP_983443.2| ACR040Wp [Ashbya gossypii ATCC 10895]
gi|442570096|sp|Q75C76.2|DBP4_ASHGO RecName: Full=ATP-dependent RNA helicase DBP4
gi|299788776|gb|AAS51267.2| ACR040Wp [Ashbya gossypii ATCC 10895]
gi|374106649|gb|AEY95558.1| FACR040Wp [Ashbya gossypii FDAG1]
Length = 763
Score = 214 bits (545), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 156/458 (34%), Positives = 240/458 (52%), Gaps = 33/458 (7%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F + IS T+K L A YI+MT +Q A + L+G D + AKTG+GK++AFL+P +E
Sbjct: 43 FQDLPISSGTVKGLKEAAYIKMTDIQRAAIPVALKGHDVLGAAKTGSGKTLAFLVPVLE- 101
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
K T+L + L++ PTRELA QI E + + + ++GG K +
Sbjct: 102 --KLYHERWTEL-DGLGALVISPTRELAMQIY-EVLVKIGKYMSFSAGLVIGGKDVKFEM 157
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
R+ IL+ TPGRLL H++ GL+ L++LVLDEAD LD+GF+K ++ IV
Sbjct: 158 ERVSK--INILIGTPGRLLQHMDQSVGLNTS--NLQILVLDEADRCLDMGFKKALDAIVS 213
Query: 561 CLPRRRQSLLFSATMPKELVLKREHTYIDTVGLGSVE---------TPVKIKQSCLVAPH 611
LP RQ+LLFSAT + L + D +G+++ TP ++Q +
Sbjct: 214 NLPPSRQTLLFSATQSQSLADLARLSLADYKTVGTMDGPSSKNKPATPENLEQFYIQVAL 273
Query: 612 ELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK--MNVREMYSRKPQLY 669
IL +K H+ K+IVF S+ +Y R+M+ +++ ++ R+ Q
Sbjct: 274 PDKLDILFSFIKSHLKS----KMIVFLSSSKQVHFVYETFRKMQPGISLMHLHGRQKQTA 329
Query: 670 RDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEG 729
R ++F ++ + L ++DV ARG+D+P V V+Q P D + YIHR GR+ R GK G
Sbjct: 330 RTETLDKFSRAQHVCLFSTDVVARGIDFPSVDWVIQTDCPEDVDTYIHRAGRSARYGKTG 389
Query: 730 EGVLLLAPWEE-YFLDDLKDLPLD--KLQLPHLN-PEIQLQMDNHMAKIDNNVKEAAYHA 785
+ +L+L P EE FL LK ++ KL + I+ Q+ + + K D +K A A
Sbjct: 390 KSLLMLTPQEEDAFLARLKGKLIEPSKLNIKQSKRKSIKPQLQSLLFK-DPELKYLAQKA 448
Query: 786 WLGYYNSIREIGRDKTTLV--ELA-NKFAQSIGLQRPP 820
++ Y SI I +D EL +FA S+GL P
Sbjct: 449 FISYVRSIY-IQKDTEVFKFNELPLEEFAASLGLPGAP 485
>gi|293603664|ref|ZP_06686084.1| ATP-dependent RNA helicase RhlE [Achromobacter piechaudii ATCC
43553]
gi|292817932|gb|EFF76993.1| ATP-dependent RNA helicase RhlE [Achromobacter piechaudii ATCC
43553]
Length = 493
Score = 214 bits (545), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 135/390 (34%), Positives = 208/390 (53%), Gaps = 27/390 (6%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F + G+ PL ++++ GY T +Q + +EG+D + A+TGTGK+ AF +P +
Sbjct: 19 FADFGLHPLLLQSIAETGYTVPTPIQAQAIPVVVEGRDVMGAAQTGTGKTAAFTVPILHR 78
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
++ ++S + P+ LIL PTRELA Q+ E++ + + GG +
Sbjct: 79 LMPLANASASPARHPVRALILTPTRELADQVF-ESVKRYSKQTPLRSAVVFGGVDIGPQK 137
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
L C+ILVATPGRLLDH+E K+ V L + +LVLDEAD +LD+GF D+E I+
Sbjct: 138 EALRRG-CEILVATPGRLLDHVEQKN---VNLSQVGILVLDEADRMLDMGFLPDLERIIR 193
Query: 561 CLPRRRQSLLFSATMPKELVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQI--- 617
LP +RQ LLFSAT E + K +Y++ VE V + + ++ +++
Sbjct: 194 LLPAQRQGLLFSATFSNE-IRKLGRSYLNQ----PVEIEVAARNATATTITQIAYKMSSD 248
Query: 618 -----LHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDR 672
+ HL+K L +VIVF +T + T+ L L + ++ K Q R +
Sbjct: 249 AKRAAVVHLVKSRGL----KQVIVFSNTKIGTARLARELERDGVKAESIHGDKTQADRMK 304
Query: 673 ISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGV 732
E F+A +LV +DV+ARG+D V V+ +P + E Y+HR+GRTGR G GE +
Sbjct: 305 ALEAFKAGDLEVLVATDVAARGLDVAGVPCVINYDLPYNAEDYVHRIGRTGRAGASGEAI 364
Query: 733 LLLAPWEEYFLDDL-----KDLPLDKLQLP 757
L P EE FL D+ +++P L LP
Sbjct: 365 ALFTPDEERFLLDIEKLIKREVPRGTLDLP 394
>gi|195112586|ref|XP_002000853.1| GI10456 [Drosophila mojavensis]
gi|193917447|gb|EDW16314.1| GI10456 [Drosophila mojavensis]
Length = 748
Score = 214 bits (544), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 148/453 (32%), Positives = 250/453 (55%), Gaps = 35/453 (7%)
Query: 385 GISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAV--L 442
+S T++A+ G+ +MT +Q +L+ L+G+D V A+TG+GK++AFL+PA+E + L
Sbjct: 260 AVSEATLRAIEEMGFSEMTEIQAKSLTPLLKGRDLVGAAQTGSGKTLAFLIPAVELINKL 319
Query: 443 KATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRR 502
+ + T V+I+ PTREL+ Q L+ +H L + GG+ +V+ +
Sbjct: 320 RFMPRNGTG------VIIISPTRELSMQTFGVLKELMAHHHHTYGLVM-GGSNRQVESEK 372
Query: 503 LESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCL 562
L S ILVATPGRLLDH++N + L+ L++DE D +L++GF ++++ I++ L
Sbjct: 373 L-SKGINILVATPGRLLDHLQNSPDFLYK--NLQCLIIDEVDRILEIGFEEELKQIINLL 429
Query: 563 PRRRQSLLFSATMPK------ELVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQ 616
P+RRQ++LFSAT + +L LK+E Y+ T ++Q +V P E
Sbjct: 430 PKRRQTMLFSATQTERIDALSKLALKKEPIYVGVHDNQETATVEGLEQGYIVCPSEKRLL 489
Query: 617 ILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEE 676
+L LK++ KV+VF S+ M + L + + V ++ ++ Q R +
Sbjct: 490 VLFTFLKKNR----KKKVMVFFSSCMSVKYHHELFNYIDLPVTSIHGKQKQTKRTTTFFQ 545
Query: 677 FRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGR-EGKEGEGVLLL 735
F ++ IL+ +DV+ARG+D P V +VQ P D +YIHR+GRT R G G +L+L
Sbjct: 546 FCNAESGILLCTDVAARGLDIPQVDWIVQYDPPDDPREYIHRVGRTARGSGTSGHALLML 605
Query: 736 APWEEYFLDDLK--DLPLDKLQLPHLN-PEIQLQMDNHMAK---IDNNVKEAAYHAWLGY 789
P E FL LK +PL++ + +IQLQ++ ++K ++ + KE A+ +++
Sbjct: 606 RPEELGFLRYLKAAKVPLNEFEFSWQKIADIQLQLEKLISKNYFLNQSAKE-AFKSYVRA 664
Query: 790 YNS--IREIGRDKTTLVELANKFAQSIGLQRPP 820
Y+S +++I T ++ A+S G PP
Sbjct: 665 YDSHQLKQIFNVNTLDLQAV---AKSFGFLVPP 694
>gi|300690871|ref|YP_003751866.1| DEAD/DEAH box helicase [Ralstonia solanacearum PSI07]
gi|299077931|emb|CBJ50571.1| ATP-dependent RNA helicase, deaD-box family [Ralstonia solanacearum
PSI07]
gi|344167288|emb|CCA79493.1| ATP-dependent RNA helicase, deaD-box family [blood disease
bacterium R229]
Length = 495
Score = 214 bits (544), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 133/382 (34%), Positives = 204/382 (53%), Gaps = 10/382 (2%)
Query: 372 EEPILSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSI 431
E P FD G+ P ++AL +GY + T +Q A + + G+D + A+TGTGK+
Sbjct: 8 EAPANESVTFDTFGLHPDILRALAESGYTRPTPIQAAAIPVVVAGRDVMGAAQTGTGKTA 67
Query: 432 AFLLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLV 491
F LP I+ +L ++S + P+ LIL PTRELA Q+ + +A + + +
Sbjct: 68 GFSLPIIQNLLPEANTSASPARHPVRALILTPTRELADQVY-DNVAKYGKYTALRSAVVF 126
Query: 492 GGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGF 551
GG +L +ILVATPGRLLDH++ +S V L ++MLVLDEAD +LD+GF
Sbjct: 127 GGVDMNPQTEQLRRG-VEILVATPGRLLDHVQQRS---VNLSQVRMLVLDEADRMLDMGF 182
Query: 552 RKDVENIVDCLPRRRQSLLFSATMPKELVLKREHTYI---DTVGLG-SVETPVKIKQSCL 607
D++ I++ LP RQ+LLFSAT E + K +Y+ T+ + S T ++Q
Sbjct: 183 LPDLQRIINLLPAHRQTLLFSATFSPE-IKKLAASYLRHPQTIEVARSNATADNVRQVIY 241
Query: 608 VAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQ 667
P L HLL++ + IVF ++ + S L L +N ++ K Q
Sbjct: 242 TVPDGHKQAALVHLLRQRAEQGLPSQCIVFSNSKIGCSRLARALEREGINANAIHGDKTQ 301
Query: 668 LYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGK 727
R + E F+ +LV +DV+ARG+D + V+ +P + E Y+HR+GRTGR G
Sbjct: 302 TERMQTLEAFKQGTVDVLVATDVAARGLDISQMPCVINFDLPFNAEDYVHRIGRTGRAGA 361
Query: 728 EGEGVLLLAPWEEYFLDDLKDL 749
G+ + L AP +E L D++ L
Sbjct: 362 SGDALSLFAPGDERLLADIEKL 383
>gi|309781736|ref|ZP_07676469.1| ATP-dependent RNA helicase [Ralstonia sp. 5_7_47FAA]
gi|308919377|gb|EFP65041.1| ATP-dependent RNA helicase [Ralstonia sp. 5_7_47FAA]
Length = 498
Score = 214 bits (544), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 134/391 (34%), Positives = 204/391 (52%), Gaps = 10/391 (2%)
Query: 363 NGEKKEKREEEPILSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVK 422
N + E P FD G+ P ++ALT +GY + T +Q A + G D +
Sbjct: 2 NTATMSEASEAPANESVTFDSFGLHPDVLRALTESGYTKPTPIQAAAIPVVTAGHDVMGA 61
Query: 423 AKTGTGKSIAFLLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNH 482
A+TGTGK+ F LP I +L ++S + P+ LIL PTRELA Q+ + +A +
Sbjct: 62 AQTGTGKTAGFSLPIIHNLLPDANTSASPARHPVRALILTPTRELADQVY-DNVAKYAKY 120
Query: 483 DGIGVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDE 542
+ + GG +L +ILVATPGRLLDH++ +S V L ++MLVLDE
Sbjct: 121 TALRSAVVFGGVDMNPQTEQLRRG-VEILVATPGRLLDHVQQRS---VNLSQVRMLVLDE 176
Query: 543 ADHLLDLGFRKDVENIVDCLPRRRQSLLFSATMPKELVLKREHTYI---DTVGLG-SVET 598
AD +LD+GF D++ I++ LP RQ+LLFSAT E + + +Y+ T+ + S T
Sbjct: 177 ADRMLDMGFLPDLQRIINLLPAHRQTLLFSATFSPE-IKRLAASYLRHPQTIEVARSNAT 235
Query: 599 PVKIKQSCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNV 658
++Q P L HLL++ + IVF ++ + S L L +N
Sbjct: 236 AENVRQVIYTVPDNHKQAALVHLLRQRAEQGLPRQCIVFSNSKIGCSRLARALEREGINA 295
Query: 659 REMYSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHR 718
++ K Q R + E F+ +LV +DV+ARG+D + V+ +P + E Y+HR
Sbjct: 296 NAIHGDKTQTERMQTLEAFKQGTVDVLVATDVAARGLDISQMPCVINFDLPFNAEDYVHR 355
Query: 719 LGRTGREGKEGEGVLLLAPWEEYFLDDLKDL 749
+GRTGR G G+ + L AP +E L D++ L
Sbjct: 356 IGRTGRAGASGDALSLFAPGDERLLADIEKL 386
>gi|427797681|gb|JAA64292.1| Putative atp-dependent rna helicase, partial [Rhipicephalus
pulchellus]
Length = 531
Score = 214 bits (544), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 162/466 (34%), Positives = 256/466 (54%), Gaps = 39/466 (8%)
Query: 375 ILSQKRFDEC--GISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIA 432
+LS +F +S T+KA+ G+ +MT +Q T+ LEGKD V AKTG+GK++A
Sbjct: 31 VLSDTQFSSLRGKVSDATLKAIEGMGFKRMTEIQAKTIPHLLEGKDVVAAAKTGSGKTLA 90
Query: 433 FLLPAIEAVLKATSSSTTQLVP--PIYVLILCPTRELASQIAAEAIALLKNHD-GIGVLT 489
FL+PA+E + K + +P L++ PTRELA Q LL + +G+
Sbjct: 91 FLIPAVELLYK------LKFMPRNGTGALVIAPTRELAMQTFGVLQELLSGQNQTLGL-- 142
Query: 490 LVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDL 549
++GGT + + +L + LVATPGRLLDH++N S + L+ L++DEAD +LD+
Sbjct: 143 IMGGTNRQSEASKL-AKGVNFLVATPGRLLDHLQNSSEFVYK--NLQCLIIDEADRILDI 199
Query: 550 GFRKDVENIVDCLPRRRQSLLFSATMPK------ELVLKREHTYIDTVGLGSVETPVKIK 603
GF ++V+ I+ LP+RRQ++LFSAT+ K ++ LK E YI T ++
Sbjct: 200 GFEEEVKQILRILPKRRQTMLFSATLTKKTEDLVKVALKSEPLYIGLDENKEQATVEGLE 259
Query: 604 QSCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYS 663
Q +V P + F +L LK++ KV+VF S+ + + LL + + V ++
Sbjct: 260 QGYVVCPSDKRFLLLFTFLKKN----RKKKVMVFFSSCLSVKYHHELLNYIDLPVMSIHG 315
Query: 664 RKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTG 723
++ Q R +F ++ IL+ +DV+ARG+D P+V +VQ P D ++YIHR+GRT
Sbjct: 316 KQKQAKRTTTFFQFCNAESGILLCTDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTA 375
Query: 724 R-EGKEGEGVLLLAPWEEYFLDDLK--DLPLDKLQLPHLN-PEIQLQMDNHMAK---IDN 776
R EG G +L+L P E FL LK +PL + + IQ Q++ ++K +
Sbjct: 376 RGEGGRGHALLILRPEEVGFLRYLKVAKVPLQEFEFSWAKIANIQPQLEKLISKNYYLHM 435
Query: 777 NVKEAAYHAWLGYYNS--IREIGRDKTTLVELANKFAQSIGLQRPP 820
+ KE AY A++ Y+S ++ I D TL + + A+S G PP
Sbjct: 436 SAKE-AYKAYVRAYDSHHLKSI-FDVNTLDLI--QVAKSFGFLVPP 477
>gi|423636821|ref|ZP_17612474.1| hypothetical protein IK7_03230 [Bacillus cereus VD156]
gi|401274649|gb|EJR80621.1| hypothetical protein IK7_03230 [Bacillus cereus VD156]
Length = 458
Score = 214 bits (544), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 136/373 (36%), Positives = 199/373 (53%), Gaps = 21/373 (5%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
K F E GIS L G + T +QE + + GKD + +AKTGTGK++AF+LP +
Sbjct: 5 KNFLELGISETFNHTLRENGITEATPIQEQAIPVIMSGKDIIGQAKTGTGKTLAFVLPIL 64
Query: 439 EAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
E + S + LI+ PTRELA QI E +L + I VL + GG
Sbjct: 65 EKIDPECSD--------VQALIVAPTRELALQITTEIKKMLVQREDINVLAIYGGQDVAQ 116
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
R+L+ + I+VATPGRLLDHI ++ + L L +VLDEAD +L GF D+E+I
Sbjct: 117 QLRKLKGN-THIVVATPGRLLDHIRRET---IDLSNLSTIVLDEADQMLYFGFLYDIEDI 172
Query: 559 VDCLPRRRQSLLFSATMPKELVLKREHTYID---TVGLGSVETPVK-IKQSCLVAPHELH 614
+D P +Q +LFSATMPK+ + K Y+D + + S E V I+Q +
Sbjct: 173 LDETPGSKQMMLFSATMPKD-IKKLAKRYMDEPQMIQIQSEEVTVNTIEQRVIETTDRAK 231
Query: 615 FQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRIS 674
L ++ + ++FC T + S LY L+ + N E++ PQ R+R+
Sbjct: 232 PDALRFVMDRD----QPFLAVIFCRTKVRASKLYDNLKGLGYNCAELHGDIPQAKRERVM 287
Query: 675 EEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLL 734
+ FR +K L+ +DV+ARG+D VT V IP D E YIHR+GRTGR G G +
Sbjct: 288 KSFREAKIQYLIATDVAARGLDVDGVTHVFNFDIPEDVESYIHRIGRTGRAGGSGLAITF 347
Query: 735 LAPWEEYFLDDLK 747
+A +E L++++
Sbjct: 348 VAAKDEKHLEEIE 360
>gi|363736126|ref|XP_422125.2| PREDICTED: ATP-dependent RNA helicase DDX18 [Gallus gallus]
Length = 639
Score = 214 bits (544), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 153/455 (33%), Positives = 248/455 (54%), Gaps = 41/455 (9%)
Query: 386 ISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKAT 445
+S T+K ++ G+ MT +Q ++ LEG+D + AKTG+GK++AFL+PA+E + K
Sbjct: 155 VSENTLKGISDMGFTHMTEIQHKSIKPLLEGRDILAAAKTGSGKTLAFLIPAVELIYK-- 212
Query: 446 SSSTTQLVP--PIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRL 503
+ +P V+IL PTRELA Q + L NH ++GG+ + ++L
Sbjct: 213 ----LKFMPRNGTGVIILSPTRELAMQTYG-VLKELMNHHVHTYGLIMGGSNRSAEAQKL 267
Query: 504 ESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLP 563
+ I+VATPGRLLDH++N G + L+ LV+DEAD +L++GF ++++ I+ LP
Sbjct: 268 -GNGINIIVATPGRLLDHMQNTPGFMYK--NLQCLVIDEADRILEVGFEEEMKQIIKLLP 324
Query: 564 RRRQSLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQI 617
+RRQ++LFSAT ++ + LK+E Y+ T ++Q +V P E F +
Sbjct: 325 KRRQTMLFSATQTRKVEDLAKISLKKEPLYVGVDDNKETATVDGLEQGYVVCPSEKRFLL 384
Query: 618 LHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEF 677
L LK++ K++VF S+ M Y LL + + V ++ ++ Q R +F
Sbjct: 385 LFTFLKKN----RKKKLMVFFSSCMSVKYHYELLNYIDLPVLAIHGKQKQTKRTTTFFQF 440
Query: 678 RASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEG--VLLL 735
++ IL+ +DV+ARG+D P+V +VQ P D ++YIHR+GRT R G G G +L+L
Sbjct: 441 CNAESGILLCTDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTAR-GINGRGHALLIL 499
Query: 736 APWEEYFLDDLKD--LPLDKLQLPHLN-PEIQLQMDNHMAK--IDNNVKEAAYHAWLGYY 790
P E FL LK +PL + + +IQ Q++ + K + + AY A++ Y
Sbjct: 500 RPEELGFLRYLKQARVPLSEFEFSWSKISDIQSQLEKLIEKNYFLHKSAQEAYKAYIRAY 559
Query: 791 NS-----IREIGRDKTTLVELANKFAQSIGLQRPP 820
+S I +G ++L NK + S G + PP
Sbjct: 560 DSHSLKQIYNVGN-----LDL-NKVSLSFGFKVPP 588
>gi|255956657|ref|XP_002569081.1| Pc21g20950 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211590792|emb|CAP96992.1| Pc21g20950 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 805
Score = 214 bits (544), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 146/456 (32%), Positives = 245/456 (53%), Gaps = 29/456 (6%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
K F + +S T K L A+ + +T +Q ++ +G+D + AKTG+GK++AFL+P +
Sbjct: 46 KNFSDLPLSEPTAKGLAASHFKTLTDIQSRAINHAFKGRDILGAAKTGSGKTLAFLVPIL 105
Query: 439 EAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
E + + + L L+L PTRELA QI E + + + ++GG +
Sbjct: 106 ENLYRKKWTELDGL----GALVLSPTRELAIQIF-EVLRKIGRYHNFSAGLIIGGKSLRE 160
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
+Q RL IL+ TPGR+L H++ + L+MLVLDEAD ++D+GF+K V+ I
Sbjct: 161 EQDRLGR--MNILICTPGRMLQHLDQTAMFETN--NLQMLVLDEADRIMDMGFQKTVDAI 216
Query: 559 VDCLPRRRQSLLFSATMPKEL-----VLKREHTYIDTVGLGSVETPVKIKQSCLVAPHEL 613
+D LP++RQ++LFSAT K++ + +E Y+ + TP ++Q + P
Sbjct: 217 IDHLPKQRQTMLFSATQTKKVGDLARLSLQEPEYVSVHEAAASATPSTLQQHYTITPLPQ 276
Query: 614 HFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK--MNVREMYSRKPQLYRD 671
L ++ ++ K +VF S+G +Y LR+++ +++ ++ R+ Q R
Sbjct: 277 KLDTLWSFIRSNL----KSKTVVFLSSGKQVRYVYESLRQLQPGISLLHLHGRQKQGGRL 332
Query: 672 RISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEG 731
I+ +F ++ +L +DV ARG+D+P V V+Q+ P D + YIHR+GRT R + G
Sbjct: 333 DITTKFSQAQHAVLFATDVVARGLDFPAVDWVIQLDCPEDADTYIHRVGRTARYERVGRA 392
Query: 732 VLLLAPWEEY-FLDDL--KDLPLDKLQL-PHLNPEIQLQMDNHMAKIDNNVKEAAYHAWL 787
VL L P EE FL L K +P++K+ + + ++ Q+ N M D +K A++
Sbjct: 393 VLFLDPSEEKGFLKQLEHKKVPIEKINIKSNKQQSVKNQLQN-MCFKDPELKYLGQKAFI 451
Query: 788 GYYNSIREIGRDKTT--LVELA-NKFAQSIGLQRPP 820
Y SI + +DK T + EL ++A S+GL P
Sbjct: 452 SYVKSIY-VQKDKETFKIKELPLEEYAASLGLPGAP 486
>gi|392587664|gb|EIW76997.1| DEAD-domain-containing protein [Coniophora puteana RWD-64-598 SS2]
Length = 933
Score = 214 bits (544), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 154/419 (36%), Positives = 212/419 (50%), Gaps = 57/419 (13%)
Query: 412 ACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLV------------------ 453
AC D + +AKTGTGK+ AF++PAIE L A Q V
Sbjct: 195 AC----DILARAKTGTGKTFAFVIPAIEHRLNAIEHHAKQAVRDAGFVTEKHLAGRVRRQ 250
Query: 454 ---PPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQI 510
LI+ PTRELA+QIA A+ L ++H V GG ++ R I
Sbjct: 251 FTREHAGALIISPTRELATQIANTALRLTQHHKDFEVRLFYGGGSKRMQMRDWMKGRRDI 310
Query: 511 LVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCL--PRRRQS 568
+V TPGRL D IEN+ + KML+LDEAD LLD+GFR D++ I+ L P RQ+
Sbjct: 311 VVGTPGRLRDLIENEPDFKHGIEKCKMLILDEADTLLDMGFRDDLDAIISALAPPSERQT 370
Query: 569 LLFSATMPKEL------VLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILH--H 620
LLFSAT+ + + LK +H +ID V + Q V P QI H
Sbjct: 371 LLFSATISRGVRQVARNFLKPDHKFIDVVPASDSPVHAHVPQYHTVLPSAAE-QIPHLMR 429
Query: 621 LLKEHILGTPD-YKVIVFCSTGMVTSLLYLLLREM---------KMNVREMYSRKPQLYR 670
+L L P K IVF T +T L +R + + NV E++S+ Q R
Sbjct: 430 VLAHDQLTHPGRSKTIVFLPTTKMTQLFASTVRRIAKDVLPAGERTNVYEIHSKLQQRER 489
Query: 671 DRISEEFRASKR--LILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKE 728
+ S+ FR+ K +L+TSDVSARG+DYP VT VVQVG+P +QY+HR+GRTGR+G
Sbjct: 490 SKTSDLFRSDKSGASVLITSDVSARGVDYPGVTRVVQVGMPGSPDQYVHRVGRTGRQGAA 549
Query: 729 ----GEGVLLLAPWEEYFLD-DLKDLPLDKLQLPHLNPEIQLQMDNHMAKIDNNVKEAA 782
G G L+L PWE F+ L ++P+ P + E+ Q+++ D++ AA
Sbjct: 550 EGVVGRGDLVLLPWEIGFVTWQLTEVPM----RPVTSAEMARQVEDMARAFDDDPDTAA 604
>gi|391338992|ref|XP_003743837.1| PREDICTED: probable ATP-dependent RNA helicase DDX10-like
[Metaseiulus occidentalis]
Length = 853
Score = 214 bits (544), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 153/459 (33%), Positives = 246/459 (53%), Gaps = 39/459 (8%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F E +S T L G+++ TR+Q+ TL L G D + AKTG+GK++AF++P +E
Sbjct: 68 FKEAPLSVKTKAGLDRGGFVKPTRIQKETLGLALRGGDILGAAKTGSGKTLAFVVPILEI 127
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+ + + L L++ PTRELA QI + HD L ++GGT ++
Sbjct: 128 LFREMWTRLDGL----GALVITPTRELAYQIFEVLKKVGIRHDFSAGL-IIGGTEVGFER 182
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
+RL+ C I++ TPGRLL H++ + LK+LVLDEAD +LD+GF++D+ I++
Sbjct: 183 KRLQG--CNIIICTPGRLLQHMDQNPLMDP--TNLKILVLDEADRILDMGFQRDMNAILE 238
Query: 561 CLPRRRQSLLFSATMPKEL-----VLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELH- 614
LP RQ+LLFSAT K + + ++ +YI + TP + Q LV ELH
Sbjct: 239 NLPSDRQTLLFSATQTKSVKDLARLSLKDPSYISVHEKSAKATPEDLHQDYLVC--ELHD 296
Query: 615 -FQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK--MNVREMYSRKPQLYRD 671
+L LK H K+IVF S + ++R M+ V ++ Q R
Sbjct: 297 KLSLLWSFLKNH----KSKKIIVFMSCCKQVQFINTIMRRMRPGTTVLHLHGNMSQPRRM 352
Query: 672 RISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEG 731
I + F + + IL+ +D++ARG+D+P V VVQ+ P D + YIHR+GRT R G G+
Sbjct: 353 AIYDTFCSKQSAILLATDLAARGLDFPRVDWVVQLDCPEDTDTYIHRVGRTARFGNSGKA 412
Query: 732 VLLLAPWEEYFLD---DLKDLPLDKLQL-PHLNPEIQLQMDNHMAKIDNNVKEAAYHAWL 787
+L+L P EE + + K +P++K+ + P ++Q +++ A+ D +K +A ++
Sbjct: 413 LLVLLPTEEESMVQQLEKKSVPIEKIDVNPRRFYDVQRKIEAMCAR-DVELKASAQRCFV 471
Query: 788 GYYNSI-----REIGR-DKTTLVELANKFAQSIGLQRPP 820
GY I +++ R DK L + +A+S+GL P
Sbjct: 472 GYLKYIFMQKDKQVFRIDKLDL----DLYARSLGLIVTP 506
>gi|185132644|ref|NP_001117993.1| myc-regulated DEAD box protein [Oncorhynchus mykiss]
gi|52547136|gb|AAU81664.1| myc-regulated DEAD box protein [Oncorhynchus mykiss]
Length = 663
Score = 214 bits (544), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 165/500 (33%), Positives = 261/500 (52%), Gaps = 45/500 (9%)
Query: 362 GNGEKKEKREEE-----PILSQKRFDECGISPL-------TIKALTAAGYIQMTRVQEAT 409
GEK E EEE P F++ + L T+K + G+ MT +Q +
Sbjct: 142 AEGEKFEDTEEEDEPKLPSGLTGAFEDTSFASLAPLVSENTLKGVKEMGFEHMTEIQHKS 201
Query: 410 LSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLVP--PIYVLILCPTREL 467
+ LEG+D + AKTG+GK++AFL+P+IE + K + +P V+IL PTREL
Sbjct: 202 IQPLLEGRDILAAAKTGSGKTLAFLIPSIELIYK------LKFMPRNGTGVVILSPTREL 255
Query: 468 ASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSG 527
A Q L+ +H L ++GG+ + +RL ++ ILVATPGRLLDH++N +G
Sbjct: 256 AMQTYGVMKELMTHHVHTFGL-IMGGSNRTAEAQRL-ANGVNILVATPGRLLDHLQNAAG 313
Query: 528 LSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQSLLFSATMPKE------LVL 581
+ L+ L++DEAD +L++GF ++++ I+ LP+RRQ++LFSAT ++ + L
Sbjct: 314 FMYK--NLQCLIIDEADRILEVGFEEELKQIIKLLPKRRQTMLFSATQTRKVEDLARISL 371
Query: 582 KREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTG 641
K+E Y+ T ++Q +V P E F +L LK++ K++VF S+
Sbjct: 372 KKEPLYVGVDDNKDNATVDGLEQGYVVCPSEKRFMLLFTFLKKN----RKKKLMVFFSSC 427
Query: 642 MVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVT 701
M Y LL + + V ++ ++ Q R +F + IL+ +DV+ARG+D P+V
Sbjct: 428 MSVKFHYELLNYIDLPVMAIHGKQKQTKRTTTFFQFCNADSGILLCTDVAARGLDIPEVD 487
Query: 702 SVVQVGIPPDREQYIHRLGRTGREGKEGEG--VLLLAPWEEYFLDDLKD--LPLDKLQLP 757
+VQ P D ++YIHR+GRT R G G G +L+L P E FL LK +PL + +
Sbjct: 488 WIVQYDPPDDPKEYIHRVGRTAR-GINGIGHALLILRPEELGFLRFLKQAKVPLSEFEFS 546
Query: 758 HLN-PEIQLQMDNHMAK---IDNNVKEAAYHAWLGYYNSIREIGRDKTTLVELANKFAQS 813
+IQ Q++ + K + + +E AY +++ Y+S + L AQS
Sbjct: 547 WAKISDIQGQLNKLIEKNYYLHKSAQE-AYKSYVRAYDSHSLKAMYSVNTLNLP-MVAQS 604
Query: 814 IGLQRPPPLFRKTALKMGLK 833
G PP + K GLK
Sbjct: 605 FGFTVPPYVDLNVHSKGGLK 624
>gi|393247983|gb|EJD55490.1| DEAD-domain-containing protein [Auricularia delicata TFB-10046 SS5]
Length = 552
Score = 214 bits (544), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 154/456 (33%), Positives = 236/456 (51%), Gaps = 31/456 (6%)
Query: 380 RFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIE 439
RF G+S T+K L G+ MT VQ T+ A L G+D + A+TG+GK++AFL+P+IE
Sbjct: 23 RFSSLGLSEQTMKGLADMGFTNMTAVQARTIPALLAGRDVLGAARTGSGKTLAFLIPSIE 82
Query: 440 AV--LKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNH-DGIGVLTLVGGTRF 496
+ LK + T ++ ++ PTRELA QI A L+ +H G+L +GG
Sbjct: 83 LLCRLKFKPRNGTGII------VISPTRELALQIFGVAKELMAHHTQTYGIL--MGGANK 134
Query: 497 KVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVE 556
K + +LE +++ATPGRL+DH+++ G R LK LV+DEAD +L++GF + ++
Sbjct: 135 KAEAEKLEKG-VNLVIATPGRLMDHLQDTKGFVFR--NLKALVIDEADRILEVGFEEQMK 191
Query: 557 NIVDCLPRR-RQSLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSCLVA 609
I+ LP RQS+LFSAT + + L+ ID T + Q +V
Sbjct: 192 KIIAILPNEGRQSMLFSATQTTKVQDLARISLRPGPLLIDVDAEAQTSTVTTLSQGYVVC 251
Query: 610 PHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLY 669
P E F +L LK+++ K++VF S+ LL + + V +++ ++ Q
Sbjct: 252 PSERRFLLLFTFLKKNM----KKKIVVFFSSCNSVKYHAELLNYIDVPVLDLHGKQKQQK 307
Query: 670 RDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEG 729
R EF ++ L+ +DV+ARG+D P V +VQ P D YIHR+GRT R GK G
Sbjct: 308 RTTTFFEFCNAETGTLLCTDVAARGLDIPRVDWIVQFDPPDDPRDYIHRVGRTARAGKVG 367
Query: 730 EGVLLLAPWEEYFLDDLKD--LPLDKLQLPHLN-PEIQLQMDNHMAK--IDNNVKEAAYH 784
+ +L L P E FL LKD +PL++ P +Q Q++ + K + Y
Sbjct: 368 KSLLFLLPSELGFLRYLKDAKVPLNEFAFPADRIANVQSQLEKLLQKNYFLHQSARDGYR 427
Query: 785 AWLGYYNSIREIGRDKTTLVELANKFAQSIGLQRPP 820
A+L Y S ++LA K ++ G PP
Sbjct: 428 AYLQSYASYSLKKIFDINALDLA-KVGKAFGFAVPP 462
>gi|443715023|gb|ELU07175.1| hypothetical protein CAPTEDRAFT_143878, partial [Capitella teleta]
Length = 497
Score = 214 bits (544), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 154/461 (33%), Positives = 250/461 (54%), Gaps = 44/461 (9%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F + +S T+ L Y+ T +Q+ + L+ D + AKTG+GK++AFL+P +E
Sbjct: 50 FRDFPLSQRTLNGLREHKYLSPTEIQKEAIGIALQDNDILGAAKTGSGKTLAFLIPVLEK 109
Query: 441 V--LKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
+ LK TS + + LI+ PTRELA QI E I + H V ++GG K
Sbjct: 110 LNRLKWTS------MDGLGCLIISPTRELAYQIF-EVIKKVGKHHDFSVGLVIGGKSIKD 162
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
+ R+ S I++ TPGR+L H+E + L++LVLDEAD +LDLGF + + I
Sbjct: 163 EAARITS--TNIVICTPGRMLQHLEETAFFVAD--NLQILVLDEADRILDLGFARTMNAI 218
Query: 559 VDCLPRRRQSLLFSATMPKEL-----VLKREHTYIDTVGLGSVETPVKIKQSCLVAPHEL 613
++ LP RQ+LLFSAT K + + ++ Y+ + TP +++QS +V EL
Sbjct: 219 IESLPPERQTLLFSATQTKSVKDLARLSLKDPVYVSVHEKAANSTPSQLQQSYIVC--EL 276
Query: 614 HFQI--LHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK--MNVREMYSRKPQLY 669
H +I L +K+H P K++VF S+ L+ L++ + + + ++ Q+
Sbjct: 277 HEKISFLWSFIKQH----PRTKLLVFISSCKQVRFLHQALQKFRPGIAISALHGGMKQMR 332
Query: 670 RDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEG 729
R + +EF + ++L+ +D++ARG+D+P V VVQ+ P + YIHR GRT R K+G
Sbjct: 333 RMEVYQEFCRKQHMVLLATDIAARGLDFPAVNWVVQMDCPENVNTYIHRAGRTARYEKDG 392
Query: 730 EGVLLLAPWEEYFLDDL--KDLPLDKLQLPHLNPEIQLQMD---NHMAKIDNNVK---EA 781
E +L+L P EE ++ L K +PLDK++ +NP+ +D ++ + +K +A
Sbjct: 393 ESILVLTPSEEAMVEKLQEKKIPLDKIE---VNPQKLWSLDKKLEYLCASEVTMKAHAQA 449
Query: 782 AYHAWLG--YYNSIREIGRDKTTLVELANKFAQSIGLQRPP 820
A+ A+L Y+ S +E+ K E KFA S+GL P
Sbjct: 450 AFMAYLKHVYFQSDKEVFDLKKLDFE---KFAFSLGLAITP 487
>gi|300023857|ref|YP_003756468.1| DEAD/DEAH box helicase [Hyphomicrobium denitrificans ATCC 51888]
gi|299525678|gb|ADJ24147.1| DEAD/DEAH box helicase domain protein [Hyphomicrobium denitrificans
ATCC 51888]
Length = 540
Score = 214 bits (544), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 131/376 (34%), Positives = 197/376 (52%), Gaps = 12/376 (3%)
Query: 376 LSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLL 435
+ K F + G+SP A+ AAGY+ T +Q A + L G+D + A+TGTGK+ +F+L
Sbjct: 1 MDSKTFADLGLSPKVQAAVMAAGYVNPTPIQAAAIPVALTGRDVLGIAQTGTGKTASFVL 60
Query: 436 PAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTR 495
P I + + + LIL PTRELA+Q+A NH + V L+GG
Sbjct: 61 PMITRLETGRARARMP-----RSLILAPTRELAAQVAQSFEKYGTNHK-LSVALLIGGVS 114
Query: 496 FKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDV 555
++L+ +L+ATPGRLLDH V LMG+++LV+DEAD +LD+GF D+
Sbjct: 115 MDDQVKKLDRG-VDVLIATPGRLLDHFGRGR---VMLMGVEILVIDEADRMLDMGFIPDI 170
Query: 556 ENIVDCLPRRRQSLLFSATMPKELVLKREHTYIDT--VGLGSVETPVKIKQSCLVAPHEL 613
E I LP RRQ+L FSATMP E+ + D + + T K V
Sbjct: 171 EKICKLLPPRRQTLFFSATMPPEITRLVDQFLKDPTRIEVAKPATTAKTITQRFVYCQNG 230
Query: 614 HFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRI 673
+L+E I I+FC+ ++LY L + N E++ Q R
Sbjct: 231 EDWAKREMLRELIRDGNVKNAIIFCNRKRDVAVLYKSLSKHGFNAGELHGDMDQTSRTET 290
Query: 674 SEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVL 733
++FR + ++L SDV+ARG+D PDV+ V +P + Y+HR+GRTGR G+EG
Sbjct: 291 LDKFRNGEIMLLAASDVAARGLDIPDVSHVFNFDLPWAADDYVHRIGRTGRAGREGHSAS 350
Query: 734 LLAPWEEYFLDDLKDL 749
L++P + F+ D++ +
Sbjct: 351 LVSPDDLKFVADIEKV 366
>gi|220929887|ref|YP_002506796.1| DEAD/DEAH box helicase [Clostridium cellulolyticum H10]
gi|220000215|gb|ACL76816.1| DEAD/DEAH box helicase domain protein [Clostridium cellulolyticum
H10]
Length = 565
Score = 214 bits (544), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 137/416 (32%), Positives = 223/416 (53%), Gaps = 24/416 (5%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F + +S +A+ G+ + T +Q ++ LEG D + +A+TGTGK+ AF +PA+E
Sbjct: 6 FKDLTLSDEVQRAIVDMGFEEATPIQSQSIPYILEGNDLIGQAQTGTGKTCAFGIPAVEK 65
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+ S I VL+L PTRELA Q E +LK DGI +L + GG
Sbjct: 66 IDPQIDS--------IQVLVLSPTRELAIQSCEELRNVLKYKDGIRILPVYGGQPIDRQI 117
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
L+ P QI++ TPGR++DH+ ++ ++L LKM+VLDEAD +L++GFR+D++ I++
Sbjct: 118 MALKKRP-QIIIGTPGRVMDHMRRRT---IKLESLKMIVLDEADEMLNMGFREDIDTILE 173
Query: 561 CLPRRRQSLLFSATMPKELV--LKREHTYIDTVGLGSVETPV-KIKQSCLVAPHELHFQI 617
+P RQ++LFSATMPKE++ K+ + + E V I+Q L ++
Sbjct: 174 KVPEDRQTILFSATMPKEILELTKKYQKNPVHIKIAHKELTVPSIEQYYLEVKESAKLEV 233
Query: 618 LHHLLKEHILGTPDYKV-IVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEE 676
L L+ T D K+ +VFC+T L L+ + ++ Q +RD++
Sbjct: 234 LSRLID-----TNDIKLSLVFCNTKKRVDELTASLQSRGFSAEALHGDMRQEHRDKVMNL 288
Query: 677 FRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLA 736
FR IL+ +DV+ARG+D DV +V +P D E Y+HR+GRTGR G+ G+ +
Sbjct: 289 FRKGNFDILIATDVAARGIDVDDVEAVFNYDLPNDDEYYVHRIGRTGRAGRTGKAFTFIY 348
Query: 737 PWEEYFLDDLKDL---PLDKLQLPHLNPEIQLQMDNHMAKIDNNVKEAAYHAWLGY 789
E Y L D++ + ++ P LN + +M N + + N+K+ + + +
Sbjct: 349 GREMYKLRDIQRYTKSTIIPMKPPSLNEVEEKKMSNILKALKENLKDESVSKFASH 404
>gi|359428657|ref|ZP_09219687.1| ATP-dependent RNA helicase [Acinetobacter sp. NBRC 100985]
gi|358235843|dbj|GAB01226.1| ATP-dependent RNA helicase [Acinetobacter sp. NBRC 100985]
Length = 639
Score = 214 bits (544), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 134/395 (33%), Positives = 209/395 (52%), Gaps = 22/395 (5%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
K F E + +AL G+ T VQE + A LEGKD +V ++TG+GK+ AFLLP +
Sbjct: 7 KTFAEFSLHETLQQALEGLGFTSPTPVQEQAIPAALEGKDLLVSSQTGSGKTAAFLLPTL 66
Query: 439 EAVLKATS----SSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGT 494
A+ + + V +L+LCPTRELA Q++ +AIA +++ G+ + ++GG
Sbjct: 67 NALAGQETFVPFKERMKAVTQPSILVLCPTRELAQQVSQDAIAFVRHMKGVRIAAIMGGM 126
Query: 495 RFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKD 554
F ++L+ Q++VATPGRLLD + + ++L ++ L++DEAD +LDLGF +D
Sbjct: 127 PFGKQIQQLKG--AQVVVATPGRLLDLVNRRQ---LKLDKVESLIVDEADRMLDLGFSED 181
Query: 555 VENIVDCLPRRRQSLLFSATMPKELVLKREHTYIDTVGLGSVETPVKIKQSCLVAPH--- 611
+E I D R Q+L+FSAT ++ E D + ++ET H
Sbjct: 182 LEAISDLAANRNQTLMFSATFADRIIRLAERMMNDPERI-AIETGHTTNTDITQTLHWTD 240
Query: 612 --ELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLY 669
E ++L H L + L + +VF ST T +L L E +V ++ PQ
Sbjct: 241 GFEHKKKLLTHWLSDENLD----QAVVFASTQEDTDMLAEELAEAGHSVVALHGAMPQTV 296
Query: 670 RDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEG 729
R+R R + ILV +DV+ARG+D P ++ V+ G+P E Y+HR+GRTGR G+ G
Sbjct: 297 RNRRLRSIREGRAKILVATDVAARGLDVPTISHVINFGLPMKNEDYVHRIGRTGRAGRTG 356
Query: 730 EGVLLLAPWEE---YFLDDLKDLPLDKLQLPHLNP 761
+ + L E L+D D L+ ++ L P
Sbjct: 357 QAITLATYRERGKIRALEDYLDARLNVSEIEGLEP 391
>gi|213405451|ref|XP_002173497.1| ATP-dependent RNA helicase dbp4 [Schizosaccharomyces japonicus
yFS275]
gi|212001544|gb|EEB07204.1| ATP-dependent RNA helicase dbp4 [Schizosaccharomyces japonicus
yFS275]
Length = 767
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 149/454 (32%), Positives = 241/454 (53%), Gaps = 31/454 (6%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F++ +S T AL A +++ T +Q+ + L+G+D + AKTG+GK++AFL+P IE
Sbjct: 41 FEDLPLSQPTKSALKNAHFVKCTDIQKKAIYVALKGRDILGAAKTGSGKTLAFLIPVIEN 100
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+ + + L LI+ PTRELA Q + + + H L ++GG +K ++
Sbjct: 101 LYRRKWTPYDGL----GALIISPTRELAMQTFETLVKIGRLHSFSAGL-IIGGNDYKQER 155
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
RL ILV TPGRLL H++ ++ L+MLVLDEAD +LD+GFRK ++ I+
Sbjct: 156 DRLSR--MNILVCTPGRLLQHMDQ--AINFDTSSLQMLVLDEADRILDMGFRKTLDAIIT 211
Query: 561 CLPRRRQSLLFSATMPKELVLKR----EHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQ 616
LP++RQ++LFSAT L R + YI TP + Q LVAP
Sbjct: 212 SLPKKRQTMLFSATQTSVSDLARLSLHDPDYISVHEHADHVTPDNLNQFYLVAPLPEKLD 271
Query: 617 ILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNV--REMYSRKPQLYRDRIS 674
IL +K H+ K+IVF S+ + + ++ V ++ ++ Q R I+
Sbjct: 272 ILFGFIKTHL----KLKIIVFFSSCKQVRFAFECFKRLRPGVPLMHLHGKQKQASRTEIA 327
Query: 675 EEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLL 734
+F ++K +L+ +D+ ARG+D+P V VVQV P D + YIHR+GRT R + G +L+
Sbjct: 328 AKFTSTKNAVLLCTDIVARGLDFPAVDWVVQVDAPEDVQTYIHRVGRTARFERGGNALLM 387
Query: 735 LAPWEEYFLD--DLKDLPLDKLQLPHLNPEIQLQMDNHMAKI---DNNVKEAAYHAWLGY 789
L P EE FL D K +P++++ + + + N++ + D ++K A++ Y
Sbjct: 388 LLPSEEAFLKRLDSKKVPIERINIKEGK---KTSIRNNLQALCFKDPDLKYLGQKAFISY 444
Query: 790 YNSIREIGRDKTTLV--ELAN-KFAQSIGLQRPP 820
S+ + +DK EL +FA ++GL P
Sbjct: 445 VRSVF-LLKDKEVFKVDELPTAEFADALGLPGTP 477
>gi|226291927|gb|EEH47355.1| ATP-dependent RNA helicase DBP4 [Paracoccidioides brasiliensis
Pb18]
Length = 814
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 146/456 (32%), Positives = 239/456 (52%), Gaps = 33/456 (7%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F + +S ++ L+A+ + +T +Q L L+G+D + AKTG+GK++AFL+P +E
Sbjct: 51 FADLPLSEASLDGLSASHFKTLTSIQAKALPHALKGRDILGAAKTGSGKTLAFLVPLLEL 110
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+ + + L L+L PTRELA QI E + + H ++GG + +Q
Sbjct: 111 LYRKQWTEYDGL----GALVLSPTRELAIQIF-EVLRKIGRHHSFSAGLVIGGKSLQEEQ 165
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
RL ILV TPGR+L H++ + +++LVLDEAD ++D+GF+ V+ IV+
Sbjct: 166 ERLGR--MNILVCTPGRMLQHMDQTAAFDTNR--IQLLVLDEADRIMDMGFQNTVDAIVE 221
Query: 561 CLPRRRQSLLFSATMPKEL-----VLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHF 615
LP+ RQ++LFSAT +++ + ++ YI S TP K++Q+ +V P
Sbjct: 222 HLPKERQTMLFSATQTQKVSDLARLSLQDPEYISVHEAASSATPAKLQQNYIVTPLPEKL 281
Query: 616 QILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK--MNVREMYSRKPQLYRDRI 673
L ++ + K++VF S+G +Y R M+ +++ ++ R+ Q R I
Sbjct: 282 DTLWSFIRSSLKS----KIMVFFSSGKQVRFVYESFRHMQPGISLLHLHGRQKQGARVDI 337
Query: 674 SEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVL 733
+++F +K L +D++ARG+D+P V V+QV P D + YIHR GRT R + G VL
Sbjct: 338 TKKFSVAKHACLFATDIAARGLDFPAVDWVIQVDCPEDADTYIHRAGRTARYERNGRAVL 397
Query: 734 LLAPWEEYFLDDLKDLPLDKLQLPHLN------PEIQLQMDNHMAKIDNNVKEAAYHAWL 787
L P EE + LK L K+ + +N I+ Q+ N M D +K A++
Sbjct: 398 FLEPSEEAAM--LKRLEQKKIPIEKINVRTKKQQSIKHQLQN-MCFKDPALKYLGQKAFI 454
Query: 788 GYYNSIREIGRDKTTLV--ELA-NKFAQSIGLQRPP 820
Y SI + +DK V +L +A S+GL P
Sbjct: 455 SYVKSIH-VQKDKEVFVVKDLPLEAYAASLGLPGAP 489
>gi|421486785|ref|ZP_15934320.1| ATP-dependent RNA helicase [Achromobacter piechaudii HLE]
gi|400194954|gb|EJO27955.1| ATP-dependent RNA helicase [Achromobacter piechaudii HLE]
Length = 497
Score = 213 bits (543), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 135/390 (34%), Positives = 209/390 (53%), Gaps = 27/390 (6%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F + G+ PL ++++ GY T +Q + +EG+D + A+TGTGK+ AF LP +
Sbjct: 19 FADFGLHPLLLQSIAETGYTIPTPIQAQAIPVVVEGRDVMGAAQTGTGKTAAFTLPILHR 78
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
++ ++S + P+ LIL PTRELA Q+ E++ + + GG +
Sbjct: 79 LMPLANASASPARHPVRALILTPTRELADQVY-ESVKRYSKQTPLRSAVVFGGVDIGPQK 137
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
L C++LVATPGRLLDH+E K+ V L + +LVLDEAD +LD+GF D+E I+
Sbjct: 138 EALRRG-CEVLVATPGRLLDHVEQKN---VNLSQVGILVLDEADRMLDMGFLPDLERIIR 193
Query: 561 CLPRRRQSLLFSATMPKELVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQI--- 617
LP +RQ LLFSAT E + K +Y++ VE V + + ++ +++
Sbjct: 194 LLPTQRQGLLFSATFSNE-IRKLGRSYLNH----PVEIEVAARNATATTITQIAYKMSGD 248
Query: 618 -----LHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDR 672
+ HL+K L +VIVF +T + T+ L L + ++ K Q R +
Sbjct: 249 AKRAAVVHLVKSRGL----KQVIVFSNTKIGTARLARELERDGVKAESIHGDKTQADRMK 304
Query: 673 ISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGV 732
E F+A + +LV +DV+ARG+D V V+ +P + E Y+HR+GRTGR G GE +
Sbjct: 305 ALEAFKAGELEVLVATDVAARGLDVAGVPCVINYDLPYNAEDYVHRIGRTGRAGASGEAI 364
Query: 733 LLLAPWEEYFLDDL-----KDLPLDKLQLP 757
L P EE FL D+ +++P L LP
Sbjct: 365 ALFTPDEERFLLDIEKLIKREVPRGTLDLP 394
>gi|406606941|emb|CCH41663.1| ATP-dependent RNA helicase [Wickerhamomyces ciferrii]
Length = 578
Score = 213 bits (543), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 158/464 (34%), Positives = 255/464 (54%), Gaps = 46/464 (9%)
Query: 380 RFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIE 439
+FD+ +S T+KA+ + G+ +MT+VQ T+ L G+D + AKTG+GK++AFL+PAIE
Sbjct: 114 KFDDHNLSAPTMKAIKSMGFEKMTQVQARTIPPLLAGRDVLGAAKTGSGKTLAFLIPAIE 173
Query: 440 AV--LKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHD-GIGVLTLVGGTRF 496
+ LK + T V+++ PTRELA QI A L+++H G++ +GG
Sbjct: 174 MLYSLKFKPRNGTG------VIVVSPTRELALQIFGVARELMEHHSQTFGIV--IGGANR 225
Query: 497 KVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVE 556
+ ++ +L +L+ATPGRLLDH++N G + LK LV+DEAD +L++GF +++
Sbjct: 226 RAEEEKLVKG-VNLLIATPGRLLDHLQNTRGFVFK--NLKALVIDEADRILEIGFEEEMR 282
Query: 557 NIVDCLPR-RRQSLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSCLVA 609
I+ LP+ RQS+LFSAT + + L+ +I+ T +++Q +V
Sbjct: 283 QIIKILPKDERQSMLFSATQTTKVEDLARISLRPGPLFINVDSKEENSTVDRLEQGYVVC 342
Query: 610 PHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLY 669
+ F +L LK ++ K+IVF S+ LL + + V E++ ++ Q
Sbjct: 343 ESDKRFLLLFSFLKRNV----KKKIIVFLSSCNSVKYYAELLNYIDLPVLELHGKQKQQK 398
Query: 670 RDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGR-EGKE 728
R EF +K+ IL+ +DV+ARG+D P V ++Q P D YIHR+GRT R +
Sbjct: 399 RTNTFFEFINAKQGILICTDVAARGLDIPSVDWIIQFDPPDDPRDYIHRVGRTARGTTAK 458
Query: 729 GEGVLLLAPWEEYFLDDLK--DLPLDKLQLPHLN--PEIQLQMDNHMAKIDNNVKEAA-- 782
G ++ L P E FL LK +PL++ + P LN +Q Q++ + K + + ++A
Sbjct: 459 GRSLMFLTPNELGFLRYLKAAKVPLNEYEFP-LNKIANVQSQLEK-LIKQNYWLHQSAKD 516
Query: 783 -YHAWLGYYNS-----IREIGRDKTTLVELANKFAQSIGLQRPP 820
Y ++L Y+S + +I DK LV K A+S G Q PP
Sbjct: 517 GYRSYLQAYSSHHLKTVYQI--DKLDLV----KVAKSFGFQVPP 554
>gi|253574214|ref|ZP_04851556.1| DEAD/DEAH box helicase domain-containing protein, partial
[Paenibacillus sp. oral taxon 786 str. D14]
gi|251846691|gb|EES74697.1| DEAD/DEAH box helicase domain-containing protein [Paenibacillus sp.
oral taxon 786 str. D14]
Length = 375
Score = 213 bits (543), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 139/373 (37%), Positives = 197/373 (52%), Gaps = 44/373 (11%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F+ +SPL ++ L G + T VQ A + G+DA+V+A+TGTGK++AFLLP +E
Sbjct: 5 FESLNVSPLLVRKLQGQGIVNPTPVQAAAIPVLQSGEDAIVQAQTGTGKTLAFLLPILEK 64
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+ P LI+ PTRELA QI AEA L + +G+ VL GG +
Sbjct: 65 IRPER--------PEAQALIITPTRELAIQITAEARKLAEAMEGLSVLAAYGGQDVERQL 116
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
R+L++ Q+++ TPGRLLDH+ S + L ++ LVLDEAD +L +GF +VE I+
Sbjct: 117 RKLKNG-AQLVIGTPGRLLDHLRRGS---LTLGAVRYLVLDEADQMLHMGFLAEVEEILS 172
Query: 561 CLPRRRQSLLFSATMPKELVLKREHTYIDT-----------VGLGS-----VETPVKIKQ 604
+PR RQ++LFSATMP V + TY+D V L S VE + KQ
Sbjct: 173 LVPRSRQTMLFSATMPGN-VKRLAKTYMDKPRDIQIAETSRVTLDSIRQILVECTDRTKQ 231
Query: 605 SCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSR 664
S L+ E I Y ++FC T S L L+ E++
Sbjct: 232 SALI---------------ESIRSQRPYLAVIFCRTKRRASTLNEALQAAGFQSDELHGD 276
Query: 665 KPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGR 724
Q R+++ FR++K +LV +DV+ARG+D VT V IP D + YIHR+GRTGR
Sbjct: 277 LSQAKREQVMRAFRSAKLELLVATDVAARGIDVEGVTHVFNYDIPHDVDSYIHRIGRTGR 336
Query: 725 EGKEGEGVLLLAP 737
G++G V AP
Sbjct: 337 AGEKGVAVTFAAP 349
>gi|407926604|gb|EKG19571.1| RNA helicase ATP-dependent DEAD-box conserved site [Macrophomina
phaseolina MS6]
Length = 833
Score = 213 bits (543), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 156/478 (32%), Positives = 248/478 (51%), Gaps = 38/478 (7%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
K F + +S T L + + MT +Q + L+G D + AKTG+GK++AF++P +
Sbjct: 48 KSFTDLPLSEPTKAGLKSCHFAAMTDIQTRAIPLALKGADILGAAKTGSGKTLAFVVPVL 107
Query: 439 EAVLKATSSSTTQLVPP---IYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTR 495
E + + +Q V P + +I+ PTRELA QI + K ++GG
Sbjct: 108 ENLYR------SQCVGPDAGLGAMIISPTRELAIQIFEVLYNIGKKGHLFSAGLVIGGKS 161
Query: 496 FKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDV 555
+ ++ L I+V TPGR+L H+ G V L+MLVLDEAD +LD+GF++D+
Sbjct: 162 LQEERDALVR--MNIVVCTPGRMLQHLSQTVGFFVD--NLQMLVLDEADRILDMGFQRDL 217
Query: 556 ENIVDCLPRRRQSLLFSATMPKEL-----VLKREHTYIDTVGLGSVETPVKIKQSCLVAP 610
+ I+D LP++RQ+LLFSAT K++ + ++ Y+ TP ++Q+ ++ P
Sbjct: 218 DAIIDYLPKQRQTLLFSATQTKKVSDLARLSLQDPEYVSVHESAETATPKSLQQNYVITP 277
Query: 611 HELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK--MNVREMYSRKPQL 668
L ++ + K+IVF S+G +Y R M+ + + ++ R+ Q
Sbjct: 278 LSEKLDTLWSFIQ----ASKKSKIIVFLSSGKQVRFVYESFRHMQPGIPLLHLHGRQKQT 333
Query: 669 YRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKE 728
R I+++F A+K+ L +DV+ARG+D+P V VVQV P D + YIHR+GRT R ++
Sbjct: 334 ARLDITKKFSAAKQSCLFATDVAARGLDFPAVDWVVQVDCPEDADTYIHRVGRTARYERD 393
Query: 729 GEGVLLLAPWEEYFLDDLKDLPLDKLQLPHLN------PEIQLQMDNHMAKIDNNVKEAA 782
G VL L P EE + LK L K+ + +N I+ Q+ N M D +K
Sbjct: 394 GRAVLFLDPSEEEGM--LKRLEARKIPIERINVRTKKQQSIKNQLQN-MCFKDAQLKYLG 450
Query: 783 YHAWLGYYNSIREIGRDKTT--LVELA-NKFAQSIGLQRPPPL-FRKTALKMGLKDIP 836
A++ Y SI + +DK L +L +FA S+GL P + F K LK+ P
Sbjct: 451 QKAFISYVKSI-HVQKDKEIFQLQKLPLEEFAASLGLPGAPRIKFMKGDNAKELKNAP 507
>gi|356563121|ref|XP_003549814.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 27-like [Glycine
max]
Length = 575
Score = 213 bits (543), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 149/453 (32%), Positives = 243/453 (53%), Gaps = 36/453 (7%)
Query: 360 LNGNGEKKEKREE----EPILSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLE 415
+ G E KEK+ + I+S + F+ G+S T KA+ G+ MT++Q + L
Sbjct: 67 VEGESEVKEKKVKNNGGSGIMSTESFESLGLSEPTYKAIMDMGFHHMTQIQARAIPPLLI 126
Query: 416 GKDAVVKAKTGTGKSIAFLLPAIEAV--LKATSSSTTQLVPPIYVLILCPTRELASQIAA 473
GKD + A+TG+GK++AFL+PA+E + +K T + V+++CPTRELA Q A
Sbjct: 127 GKDVLGAARTGSGKTLAFLIPAVELLYNVKFTPRNGAG------VIVICPTRELAIQTHA 180
Query: 474 EAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLM 533
A LLK H L ++GG+ K++ R+ + +LV TPGRLLDH++N G +
Sbjct: 181 VAKELLKYHSQTLGL-VIGGSARKIEAERI-AKGINLLVGTPGRLLDHLQNTKGFIYK-- 236
Query: 534 GLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQSLLFSATMPKE------LVLKREHTY 587
LK L++DEAD +L+ F ++++ I+ LP+ RQ+ LFSAT K+ L + Y
Sbjct: 237 NLKCLMIDEADRILEANFEEEMKQIIKILPKNRQTALFSATQTKKVEDLARLSFQTTPIY 296
Query: 588 IDTVGLGSVETPVKIKQSCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLL 647
ID + T + Q +V P F +L+ LK H KV+VF S+
Sbjct: 297 IDVDDGRTKVTNEGLLQGYVVVPCAKRFIVLYSFLKRH----QSKKVMVFFSSCNSVKFH 352
Query: 648 YLLLREMKMNVREMYSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVG 707
+L +++N ++ ++ Q R +F +++ IL+ +DV+ARG+D P V +VQ
Sbjct: 353 ADILNLIQLNCSSIHGKQKQQSRTTTFFDFCKAEKGILLCTDVAARGLDIPAVDWIVQYD 412
Query: 708 IPPDREQYIHRLGRTGR-EGKEGEGVLLLAPWEEYFLDDL-------KDLPLDKLQLPHL 759
P + ++YIHR+GRT R EG +G +L L P E FL L K+ D+ ++ ++
Sbjct: 413 PPDEPKEYIHRVGRTARGEGGKGNALLFLIPEELQFLRYLKAAKVPVKEYAYDEKKVANV 472
Query: 760 NPEIQLQMDNHMAKIDNNVKEAAYHAWLGYYNS 792
++ + N+ N + + AY +++ YNS
Sbjct: 473 QSHLENLVVNNFYL--NKMAKEAYRSYILAYNS 503
>gi|328709089|ref|XP_003243867.1| PREDICTED: probable ATP-dependent RNA helicase pitchoune-like
[Acyrthosiphon pisum]
Length = 511
Score = 213 bits (543), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 156/454 (34%), Positives = 248/454 (54%), Gaps = 43/454 (9%)
Query: 390 TIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAV--LKATSS 447
T+K + G+ MT +Q T+ LEG+D V AKTG+GK++AFL+PA+E + LK
Sbjct: 34 TLKGIADMGFTVMTEIQAKTIPPLLEGRDLVGAAKTGSGKTLAFLIPAVELIYKLKFMPR 93
Query: 448 STTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDP 507
+ T + I+ PTREL+ Q L+K+H L ++GG + + +L S
Sbjct: 94 NGTGCI------IISPTRELSMQTYGVLKELMKHHHHTYGL-MMGGANRQTEATKL-SKG 145
Query: 508 CQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQ 567
I+VATPGRLLDH++N + L+ L++DEAD +LD+GF ++++ I++ LP+RRQ
Sbjct: 146 INIVVATPGRLLDHLQNSPDFLYK--NLQCLIIDEADRILDIGFEEEIKQIINLLPKRRQ 203
Query: 568 SLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVK-IKQSCLVAPHELHFQILHH 620
+++FSAT + LK+E YI V VE V ++Q ++ P E F +L
Sbjct: 204 TMMFSATKTHKTDALTTFALKKEPIYIG-VDDSKVEATVDGLEQGYVICPSEKRFLLLFT 262
Query: 621 LLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEFRAS 680
LK++ KV+VF S+ + + LL + + V ++ ++ Q R +F +
Sbjct: 263 FLKKN----RKKKVMVFFSSCLAVKYFHELLNYIDLPVMCIHGKQKQERRTTTFFQFCNA 318
Query: 681 KRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGR-EGKEGEGVLLLAPWE 739
+ IL+ +DV+ARG+D P V +VQ P D ++YIHR+GRT R EG G +L+L P E
Sbjct: 319 ETGILLCTDVAARGLDIPLVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHALLILRPEE 378
Query: 740 EYFLDDLK--DLPLDKLQLP-HLNPEIQLQMDNHMAK---IDNNVKEAAYHAWLGYYNS- 792
FL LK +PL++ + +IQLQ++ +AK + + KE A+ +++ Y+S
Sbjct: 379 LGFLQYLKKAKVPLNEFDFSWNKISDIQLQLEKLVAKNYFLHISAKE-AFKSYVRAYDSH 437
Query: 793 ----IREIGRDKTTLVELANKFAQSIGLQRPPPL 822
I ++G T K A S G PP +
Sbjct: 438 HLKQIFDVGTLDIT------KVAASFGFTTPPAV 465
>gi|428178300|gb|EKX47176.1| hypothetical protein GUITHDRAFT_157674 [Guillardia theta CCMP2712]
Length = 560
Score = 213 bits (543), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 159/486 (32%), Positives = 259/486 (53%), Gaps = 39/486 (8%)
Query: 367 KEKREEEPILSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTG 426
+E + + IL+ ++F+E I + K + G+ MT +Q T++ L G+D + +AKTG
Sbjct: 61 EENQAVDGILTARKFEELNICEESKKGVADQGFTCMTEIQAKTIAPLLSGRDVLAQAKTG 120
Query: 427 TGKSIAFLLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGI- 485
+GK++AFLLP IE + K + ++L PTRELA Q A A +K H+
Sbjct: 121 SGKTLAFLLPCIELLHKGHFAQRN----GTGAIVLAPTRELALQTYAVARETMKYHNHTH 176
Query: 486 GVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADH 545
GV ++GG + + +L +L+ATPGRLLDH++N G + L++L++DEAD
Sbjct: 177 GV--VMGGANRRAEAEKLVKG-VNLLIATPGRLLDHLQNTKGFIYK--NLQVLIIDEADR 231
Query: 546 LLDLGFRKDVENIVDCLPRRRQSLLFSATMPKELVLKREHTYIDTVGLGSVETPV--KIK 603
+L+ GF ++ I+ LP RQS+LFSAT ++ D L PV +
Sbjct: 232 ILEQGFEDEMREILKLLPSNRQSMLFSATQTSKVE--------DLARLSLRGKPVLSSTQ 283
Query: 604 QSCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYS 663
Q +V EL F++L+ LK+++ + KV+VF S+ LL + + V +++
Sbjct: 284 QGYVVVSSELRFRLLYTFLKKNL----NKKVLVFFSSCNAVKFYAELLNFVDIPVLDLHG 339
Query: 664 RKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTG 723
++ Q R EF +++ IL+ +DV+ARG+D P V V+Q P + ++YIHR+GRT
Sbjct: 340 KQKQQKRTTTFFEFCNAEKGILLCTDVAARGLDIPTVDWVIQFDPPDEPKEYIHRVGRTA 399
Query: 724 RE-GKEGEGVLLLAPWEEYFLDDLK--DLPLDKLQL-PHLNPEIQLQMDNHMAK--IDNN 777
R +G +L+L P E FL L+ ++ L + + PH IQ Q+++ +AK N
Sbjct: 400 RGINTQGRALLMLLPQELQFLKYLRHANVQLTEFEFPPHKIANIQQQLESLIAKNYYLNR 459
Query: 778 VKEAAYHAWLGYYNS--IREIGRDKTTLVELANKFAQSIGLQRPPPLFRKTALKMGLKDI 835
+ AY +++ Y S ++ I D +L LA A+S G PP + L G+K
Sbjct: 460 SAKDAYRSYILAYASHGLKNI-YDVKSLDMLA--VAKSFGFSNPPNVM----LNFGVKPS 512
Query: 836 PGIRLR 841
+R R
Sbjct: 513 DSVRKR 518
>gi|320581342|gb|EFW95563.1| Putative nucleolar DEAD box RNA helicase [Ogataea parapolymorpha
DL-1]
Length = 742
Score = 213 bits (543), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 132/384 (34%), Positives = 217/384 (56%), Gaps = 24/384 (6%)
Query: 367 KEKREEEPILSQK---RFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKA 423
K++ EE P+ K +FD+ ++ T++ + + Y+ MT +Q ++ L+G D + A
Sbjct: 28 KQQIEELPLEQAKSFTKFDDLPLTKNTLRGVKESSYVTMTDIQRDSIPLALKGHDILGAA 87
Query: 424 KTGTGKSIAFLLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHD 483
KTG+GK++AFL+P IE ++ + + LI+ PTRELA QI E + + H
Sbjct: 88 KTGSGKTLAFLIPVIEKLVHENWNE----FDGVGALIISPTRELAMQIY-EVLLKIGKHH 142
Query: 484 GIGVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEA 543
++GG ++ ++ R+ IL+ TPGRLL H++ + L+ L L++LVLDEA
Sbjct: 143 SFSAGLVIGGKDYEFEKERI--GKMNILIGTPGRLLQHMDQSATLN--LTNLQILVLDEA 198
Query: 544 DHLLDLGFRKDVENIVDCLPRRRQSLLFSATMPKELV-LKR----EHTYIDTVGLGSVET 598
D +LDLGF+K +++I+ LP RQSLLFSAT K + L R Y++ S T
Sbjct: 199 DRILDLGFKKTLDDIISNLPPERQSLLFSATQTKSVQDLARLSLVNPEYVNASSDTS-ST 257
Query: 599 PVKIKQSCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK--M 656
P ++QS +V + IL +K H+ D K++VF S+ +Y R+++ +
Sbjct: 258 PESLEQSYVVIRLQDKLDILWSFIKSHL----DSKILVFVSSSKQVHFIYEAFRKLQPGI 313
Query: 657 NVREMYSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYI 716
++ +++ R+ Q R + +F S+ L +DV ARG+D+P + VVQ+ P D YI
Sbjct: 314 SLMKLHGRQKQKARMETTFKFTESRHCCLFATDVVARGLDFPAIDWVVQLDCPEDVATYI 373
Query: 717 HRLGRTGREGKEGEGVLLLAPWEE 740
HR+GR+ R G+ G+ +L+L P EE
Sbjct: 374 HRVGRSARAGRAGKSLLMLTPSEE 397
>gi|332285242|ref|YP_004417153.1| ATP-dependent RNA helicase [Pusillimonas sp. T7-7]
gi|330429195|gb|AEC20529.1| ATP-dependent RNA helicase [Pusillimonas sp. T7-7]
Length = 455
Score = 213 bits (543), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 132/377 (35%), Positives = 204/377 (54%), Gaps = 22/377 (5%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F + G+ P ++A+T GY T +Q + ++G+D + A+TGTGK+ AF LP +
Sbjct: 14 FSDFGLHPSVLQAVTETGYTTPTPIQAQAMPMVMDGRDVMGAAQTGTGKTAAFTLPILHR 73
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+++ ++S + P+ LIL PTRELA Q+A +++ + + GG Q
Sbjct: 74 LMQFANTSASPARHPVRALILTPTRELADQVA-DSVTTYAKFTPLRSTVVFGGVDIG-PQ 131
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
R C+IL+ATPGRLLDH+E K+ V L + +LVLDEAD +LD+GF D++ IV
Sbjct: 132 RDALRRGCEILIATPGRLLDHVEQKN---VNLSQVGILVLDEADRMLDMGFLPDLDRIVR 188
Query: 561 CLPRRRQSLLFSATMPKELVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILHH 620
LP +RQ LLFSAT E I +G + P +I+ + A + QI +
Sbjct: 189 LLPAKRQGLLFSATFSNE---------IRKLGRSYLSNPAEIEVAARNATADTVTQIAYP 239
Query: 621 LLKE-------HILGTPDY-KVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDR 672
L H++ + + +VIVF +T + TS L L + ++ K QL R +
Sbjct: 240 LAGSDKRAAVVHLVKSRGFNQVIVFSNTKIGTSRLARELVRDGVKAESIHGDKSQLDRMK 299
Query: 673 ISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGV 732
+ F+A + +LV +DV+ARG+D V V+ +P + E Y+HR+GRTGR G GE +
Sbjct: 300 ALDAFKAGELEVLVATDVAARGLDVAGVPCVINYDLPYNAEDYVHRIGRTGRAGNTGEAI 359
Query: 733 LLLAPWEEYFLDDLKDL 749
P EE +L D++ L
Sbjct: 360 AFFTPEEERYLLDIEKL 376
>gi|255079320|ref|XP_002503240.1| predicted protein [Micromonas sp. RCC299]
gi|226518506|gb|ACO64498.1| predicted protein [Micromonas sp. RCC299]
Length = 770
Score = 213 bits (543), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 161/503 (32%), Positives = 254/503 (50%), Gaps = 28/503 (5%)
Query: 334 PLKSLEDEHDFEEQVELIRKEISKNKLNGNGEKK-EKREEEPILSQKRFDECGISPLTIK 392
P SL + F + E N L K EK ++ ++F + +S T +
Sbjct: 37 PASSLTPQPPFPHSRQATAPEKGTNPLAVAPRKSSEKGLGASLVGVRKFKDMPLSEATQR 96
Query: 393 ALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQL 452
L A + ++T +Q AT+ L G+D + AKTG+GK++AF++P +EA+ +A
Sbjct: 97 GLADARFKELTAIQRATIPHALAGRDILGAAKTGSGKTLAFIVPTLEALYRAKWGRQDG- 155
Query: 453 VPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILV 512
I LI+ PTRELA+QI + +A K+H + L+GG K ++ + +LV
Sbjct: 156 ---IGGLIIAPTRELATQIFQQLVAAGKHHS-LSAGLLIGGKNVKEEKDTVNR--MNLLV 209
Query: 513 ATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRR-RQSLLF 571
TPGRLL H++ + LK+LVLDEAD +LDLGFR+ + I++ LP++ RQ+LLF
Sbjct: 210 CTPGRLLQHMDETPMFDC--VSLKVLVLDEADRILDLGFRETLTAILENLPKKGRQTLLF 267
Query: 572 SATMPKEL-----VLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILHHLLKEHI 626
SAT K + + R+ Y+ + TP K+ Q + + + +K H+
Sbjct: 268 SATQTKSVKDLARLSMRDPEYLAVHAESAHATPPKLSQMVATCELDKKMETMWAFIKSHL 327
Query: 627 LGTPDYKVIVFCSTGMVTSLLYLLLREMK--MNVREMYSRKPQLYRDRISEEFRASKRLI 684
K +VF S+ ++ + R M+ + V ++ R Q+ R + F +K +
Sbjct: 328 TS----KTLVFLSSCKQVRFVHEMFRRMRPGIPVAMLHGRMKQMKRMATFDAFCKAKHTV 383
Query: 685 LVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLAPWEEYFLD 744
L +DV+ARG+D+P V V+Q P D YIHR+GRT R EG+G+LLL P E F
Sbjct: 384 LFATDVAARGLDFPSVDWVLQADCPEDVPCYIHRVGRTARYTAEGKGLLLLTPSESAFAK 443
Query: 745 DL--KDLPLDKLQLPHL-NPEIQLQMDNHMAKIDNNVKEAAYHAWLGYYNSIR-EIGRDK 800
+L +PL ++L N +I + + K D +K A A + Y SI + +D
Sbjct: 444 ELAAAKVPLKTMKLNQAKNQKITSSIQGLLGK-DTELKYLAQRAVVSYLRSIYLQPNKDV 502
Query: 801 TTLVEL-ANKFAQSIGLQRPPPL 822
+ L +A S+GL PP L
Sbjct: 503 FDVNALDVEAYAHSMGLPNPPRL 525
>gi|33594279|ref|NP_881923.1| ATP-dependent RNA helicase [Bordetella pertussis Tohama I]
gi|384205577|ref|YP_005591316.1| putative ATP-dependent RNA helicase [Bordetella pertussis CS]
gi|408417408|ref|YP_006628115.1| ATP-dependent RNA helicase [Bordetella pertussis 18323]
gi|33564354|emb|CAE43658.1| putative ATP-dependent RNA helicase [Bordetella pertussis Tohama I]
gi|332383691|gb|AEE68538.1| putative ATP-dependent RNA helicase [Bordetella pertussis CS]
gi|401779578|emb|CCJ65116.1| putative ATP-dependent RNA helicase [Bordetella pertussis 18323]
Length = 477
Score = 213 bits (543), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 140/396 (35%), Positives = 207/396 (52%), Gaps = 35/396 (8%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
+ F + G+ PL +K + GY T +Q + +EG+D + A+TGTGK+ AF LP +
Sbjct: 17 RTFADFGLHPLLLKLIADTGYTNPTPIQAQAIPVVVEGRDVMGAAQTGTGKTAAFTLPIL 76
Query: 439 EAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
++ ++S + P+ LIL PTRELA Q+ E++ H + + GG
Sbjct: 77 HRLMPLANTSASPARHPVRALILTPTRELADQVY-ESVKRYSLHTPLRSAVVFGGVDIGP 135
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
+ L C++LVATPGRLLDH+E K+ V L + +LVLDEAD +LD+GF D+E I
Sbjct: 136 QKEALRRG-CEVLVATPGRLLDHVEQKN---VNLSQVGILVLDEADRMLDMGFLPDLERI 191
Query: 559 VDCLPRRRQSLLFSATMPKELVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQIL 618
+ LP +RQ LLFSAT E I +G + PV+I+ + A + QI
Sbjct: 192 IRLLPAQRQGLLFSATFSNE---------IRKLGRSYLNHPVEIEVAARNATADTVTQIA 242
Query: 619 H------------HLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKP 666
+ HL+K L +VIVF +T + T+ L L + ++ K
Sbjct: 243 YQMHGDTKRAAVVHLVKSRGL----KQVIVFSNTKIGTARLARQLERDGVKAESIHGDKT 298
Query: 667 QLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREG 726
Q R + E F+A +LV +DV+ARG+D V V+ +P + E Y+HR+GRTGR G
Sbjct: 299 QGDRMKALEAFKAGDLEVLVATDVAARGLDVAGVPCVINYDLPYNAEDYVHRIGRTGRAG 358
Query: 727 KEGEGVLLLAPWEEYFLDDLKDL-----PLDKLQLP 757
GE + L EE +L D++ L P KL+LP
Sbjct: 359 ASGEAIALFTADEERYLLDIEKLIKRQVPRGKLELP 394
>gi|167748398|ref|ZP_02420525.1| hypothetical protein ANACAC_03142 [Anaerostipes caccae DSM 14662]
gi|167652390|gb|EDR96519.1| DEAD/DEAH box helicase [Anaerostipes caccae DSM 14662]
Length = 466
Score = 213 bits (543), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 149/448 (33%), Positives = 235/448 (52%), Gaps = 24/448 (5%)
Query: 369 KREEEPILSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTG 428
+++ E + RFDE I+ +KA+ G+ + +Q A + LEG+D V +A+TGTG
Sbjct: 3 EKDTEEFMDAVRFDELNINDKILKAVKEMGFEAASPIQGAAIPVVLEGRDIVGQAQTGTG 62
Query: 429 KSIAFLLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVL 488
K+ AF +P +E + T++ P +ILCPTRELA Q+A E L K G VL
Sbjct: 63 KTAAFGIPLLEKM-------DTKVKKP-QAMILCPTRELAIQVADEIRKLAKFMHGAKVL 114
Query: 489 TLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLD 548
+ GG R L++ I+V TPGR++DH+ + ++L LKM+VLDEAD +L+
Sbjct: 115 PIYGGQNITNQIRSLKTG-ANIIVGTPGRIMDHMRRHT---LKLEDLKMVVLDEADEMLN 170
Query: 549 LGFRKDVENIVDCLPRRRQSLLFSATMPKELVLKREHTYIDTVGLGSVE---TPVKIKQS 605
+GFR+D+E+I+ +P RQ+LLFSATMPK ++ + D+ + V T I+Q
Sbjct: 171 MGFREDIESILKEVPEERQTLLFSATMPKAILDITKKYQKDSKLIKVVRKELTVPNIEQY 230
Query: 606 CLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRK 665
+ ++L LL H +P IVFC+T + + L+ ++
Sbjct: 231 YYEVRPKQKVEVLCRLLDMH---SPKLS-IVFCNTKRMVDEVTGELKGRGYFAEGIHGDL 286
Query: 666 PQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGRE 725
Q RDR+ + FR + ILV +DV+ARG+D DV +V +P D E Y+HR+GRTGR
Sbjct: 287 KQSQRDRVMKSFRGGRVDILVATDVAARGIDVDDVDAVFNYDLPQDDEFYVHRIGRTGRA 346
Query: 726 GKEGEGVLLLAPWEEYFLDDLKDLPLDKLQ---LPHLNPEIQLQMDNHMAKIDNNVKEAA 782
G+ G +A E Y L D++ K++ +P LN + + + +I ++E
Sbjct: 347 GRTGNAFTFVAGKEIYKLRDVQRYCKTKIKARPIPSLNDVQATRAEKSLEEITGLIEENN 406
Query: 783 YHAWLGYYNSIREIGRDKTTLVELANKF 810
++ + I T +E+A F
Sbjct: 407 LDKYVDMLDEF--INETDFTALEIAAAF 432
>gi|195053518|ref|XP_001993673.1| GH20986 [Drosophila grimshawi]
gi|193895543|gb|EDV94409.1| GH20986 [Drosophila grimshawi]
Length = 689
Score = 213 bits (543), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 148/453 (32%), Positives = 247/453 (54%), Gaps = 35/453 (7%)
Query: 385 GISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKA 444
+S T++A+ G+ +MT +Q +L+ L+G+D V A+TG+GK++AFL+PA+E + K
Sbjct: 203 AVSEATLRAIAEMGFSEMTEIQSKSLTPLLKGRDLVGAAQTGSGKTLAFLIPAVELINK- 261
Query: 445 TSSSTTQLVP--PIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRR 502
+P V+I+ PTREL+ Q L+ +H L + GG+ +V+ +
Sbjct: 262 -----LHFMPRNGTGVIIISPTRELSMQTFGVLKELMAHHHHTYGLVM-GGSNRQVESEK 315
Query: 503 LESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCL 562
L ILVATPGRLLDH++N + L+ L++DE D +L++GF ++++ I++ L
Sbjct: 316 LGRG-INILVATPGRLLDHLQNSPDFLYK--NLQCLIIDEVDRILEIGFEEELKQIINLL 372
Query: 563 PRRRQSLLFSATMP------KELVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQ 616
P+RRQ++LFSAT +L LK+E Y+ T ++Q +V P E
Sbjct: 373 PKRRQTMLFSATQTDRIDALSKLALKKEPIYVGVHDSQETATVDGLEQGYIVCPSEKRLL 432
Query: 617 ILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEE 676
+L LK++ KV+VF S+ M + L + + V ++ ++ Q R +
Sbjct: 433 VLFTFLKKN----RKKKVMVFFSSCMSVKYHHELFNYIDLPVTSIHGKQKQTKRTTTFFQ 488
Query: 677 FRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGR-EGKEGEGVLLL 735
F ++ IL+ +DV+ARG+D P V +VQ P D +YIHR+GRT R G G +L+L
Sbjct: 489 FCNAESGILLCTDVAARGLDIPQVDWIVQYDPPDDPREYIHRVGRTARGSGTSGHALLML 548
Query: 736 APWEEYFLDDLK--DLPLDKLQLPHLN-PEIQLQMDNHMAK---IDNNVKEAAYHAWLGY 789
P E FL LK +PL++ + +IQLQ++ +AK ++ + KE A+ +++
Sbjct: 549 RPEELGFLRYLKAAKVPLNEFEFSWQKIADIQLQLEKLIAKNYFLNQSAKE-AFKSYVRA 607
Query: 790 YNS--IREIGRDKTTLVELANKFAQSIGLQRPP 820
Y+S +++I T ++ +K S G PP
Sbjct: 608 YDSHQLKQIFNVNTLDLQAVSK---SFGFLVPP 637
>gi|321473575|gb|EFX84542.1| hypothetical protein DAPPUDRAFT_223010 [Daphnia pulex]
Length = 869
Score = 213 bits (542), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 145/455 (31%), Positives = 243/455 (53%), Gaps = 30/455 (6%)
Query: 380 RFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIE 439
+F + +S T++ L Y T VQ+ ++ L G D + AKTG+GK++AF++P +E
Sbjct: 68 KFKDIPLSKKTLQGLQQNEYTTPTEVQKESIVLALRGLDVLGAAKTGSGKTLAFVIPVLE 127
Query: 440 AVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVD 499
+ + L LI+ PTRELA QI + HD L ++GG +
Sbjct: 128 RLYCMQWTRLDGL----GALIITPTRELAYQIFETFRKVGIQHDFSAGL-IIGGKDLNFE 182
Query: 500 QRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIV 559
++RL D C I++ TPGR+L H++ L++LV+DEAD LDLGF++ + I+
Sbjct: 183 RKRL--DQCNIMICTPGRVLHHMDENPLFDCS--NLQILVIDEADRCLDLGFQQTMNGII 238
Query: 560 DCLPRRRQSLLFSATMPKEL-----VLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELH 614
+ LP +RQ+LLFSAT K + + ++ Y+ TP ++QS ++ P +
Sbjct: 239 ENLPPKRQTLLFSATQTKSVKDLARLSLKDPVYVSVHENAQYSTPESLRQSYIITPIQNK 298
Query: 615 FQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK--MNVREMYSRKPQLYRDR 672
IL L+ H K+IVF ++ ++ ++ ++V +Y Q+ R
Sbjct: 299 VDILWSFLRSH----RKKKLIVFLTSCKQVRFIHQAFTRLRPGLSVLALYGTMHQMKRMS 354
Query: 673 ISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGV 732
+ EEF + +L +D++ARG+D+P+V V+Q+ P D YIHR GRT R K GE +
Sbjct: 355 VYEEFCEKQTAVLFATDIAARGLDFPNVDWVIQMDCPDDPSSYIHRAGRTARYQKGGESL 414
Query: 733 LLLAPWEEYFLDDL--KDLPLDKLQL-PHLNPEIQLQMDNHMAKIDNNVKEAAYHAWLGY 789
L+L P EE ++ L K +P+ K+++ P IQ +++ +A+ D +K+ A A++ Y
Sbjct: 415 LMLLPSEEAMVEQLAQKKIPIQKIEVNPSKLVSIQRKLEAMLAR-DVELKQMAQRAFVTY 473
Query: 790 YNSIREIGRDKT----TLVELANKFAQSIGLQRPP 820
S+ + +DK+ T ++L N A+S+GL P
Sbjct: 474 AKSVF-LMKDKSIFDVTSIDL-NALARSLGLALAP 506
>gi|169608057|ref|XP_001797448.1| hypothetical protein SNOG_07095 [Phaeosphaeria nodorum SN15]
gi|118575178|sp|Q0UMB9.1|DBP4_PHANO RecName: Full=ATP-dependent RNA helicase DBP4
gi|111064626|gb|EAT85746.1| hypothetical protein SNOG_07095 [Phaeosphaeria nodorum SN15]
Length = 803
Score = 213 bits (542), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 150/458 (32%), Positives = 237/458 (51%), Gaps = 35/458 (7%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F + +S T + L A + MT +Q + L+G D + AKTG+GK+++F++P +E
Sbjct: 51 FSDLPLSDPTKQGLKACHFAVMTDIQRKAVPLALKGHDILGAAKTGSGKTLSFIIPVLEN 110
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+ + + LIL PTRELA QI + K+ L+GG + ++
Sbjct: 111 LYRLQHVGAD---AGLGALILSPTRELAIQIFDVLCKIGKHGHMFAAGLLIGGKSLESER 167
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
+ L ILVATPGR+L H+ + V LKMLVLDEAD +LD+GF++DV+ I+D
Sbjct: 168 QALPR--MNILVATPGRMLQHLSQTAAFLVD--DLKMLVLDEADRILDMGFQRDVDAIID 223
Query: 561 CLPRRRQSLLFSATMPKEL-----VLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHF 615
LP+ RQ+LLFSAT K++ + ++ Y+ TP ++Q+ ++ P E
Sbjct: 224 YLPKERQTLLFSATQSKKVSDLARLSLQDPEYVSVHAEDKSATPKSLQQNYIICPLEEKL 283
Query: 616 QILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK--MNVREMYSRKPQLYRDRI 673
L ++ + K++VF S+ +Y R M+ + + ++ R+ Q R
Sbjct: 284 DTLWSFIQ----ASKKSKILVFFSSAKAVRFVYESFRHMQPGIPLLHIHGRQKQGARLDT 339
Query: 674 SEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVL 733
+ +F ++K L +DV+ARG+D+P V V+QV P D + YIHR+GRT R +EG GVL
Sbjct: 340 TAKFSSAKNSCLFATDVAARGLDFPAVDFVIQVDCPDDVDTYIHRVGRTARYNREGRGVL 399
Query: 734 LLAPWEEYFLDDLKDLPLDKLQLPHLN------PEIQLQMDNHMAKIDNNVKEAAYHAWL 787
LAP EE + LK L K+ + +N I+ Q+ N M D +K A++
Sbjct: 400 FLAPSEEEGM--LKRLEAKKVPVEAINVRQKKRQSIKEQLQN-MCFQDPALKYLGQKAFM 456
Query: 788 GYYNSI-----REIGRDKTTLVELANKFAQSIGLQRPP 820
Y S+ +E+ + K +E FA S+GL P
Sbjct: 457 TYVKSVYLQKDKEVFQLKEYDLE---AFAASLGLPGTP 491
>gi|312376077|gb|EFR23272.1| hypothetical protein AND_13185 [Anopheles darlingi]
Length = 621
Score = 213 bits (542), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 149/466 (31%), Positives = 245/466 (52%), Gaps = 35/466 (7%)
Query: 373 EPILSQKRFD--ECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKS 430
E +L + F E +S T++A+ G+ +MT +Q ++ LEG+D V AKTG+GK+
Sbjct: 119 EVLLGNQEFKSLEGKVSDNTLRAIAEMGFTKMTEIQAKSIPPLLEGRDLVGSAKTGSGKT 178
Query: 431 IAFLLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTL 490
+AFL+PA+E + K +I+ PTRELA QI L+ +H L +
Sbjct: 179 LAFLIPAVELIHKLRFKPRNG----AGAIIISPTRELAMQIFGVLKELMAHHHQTYGLLM 234
Query: 491 VGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLG 550
G +R +++ I+VATPGRLLDH+ KS + L+ L++DE D +L++G
Sbjct: 235 GGASRHTENEKL--GKGLNIIVATPGRLLDHL--KSTPNFLYKNLQCLIIDECDRILEIG 290
Query: 551 FRKDVENIVDCLPRRRQSLLFSATMPKEL------VLKREHTYIDTVGLGSVETPVKIKQ 604
F +D++ I+ LP++RQ+LLFSAT L LK E Y+ + T ++Q
Sbjct: 291 FEEDLKQIISILPKKRQTLLFSATQSSRLDELGRLALKSEPIYVGVDDNKTEATVTGLEQ 350
Query: 605 SCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSR 664
+V P E +L LK++ KV+VF S+ + + L + + V+ ++ +
Sbjct: 351 GYIVCPSEKRLLVLFTFLKKN----RKKKVMVFFSSCLSVKFHHELFNYIDLPVQSIHGK 406
Query: 665 KPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGR 724
+ Q R + +F ++ IL+ +DV+ARG+D P V +VQ P D ++YIHR+GRT R
Sbjct: 407 QKQAKRTSVFFQFCNAESGILLCTDVAARGLDIPAVDWIVQYDPPNDTKEYIHRVGRTAR 466
Query: 725 -EGKEGEGVLLLAPWEEYFLDDLKD--LPLDKLQLPHLN-PEIQLQMDNHMAK--IDNNV 778
E G +L+L P E FL LK +PL++ + +IQLQ++N ++K N
Sbjct: 467 GENLCGHALLILRPEELGFLKYLKQAKVPLNEFEFSWSKIADIQLQLENLLSKNYFLNQS 526
Query: 779 KEAAYHAWLGYYNSIREIGRDKTTLVELAN----KFAQSIGLQRPP 820
+ A+ +++ Y G + +AN + A++ G +PP
Sbjct: 527 GKLAFKSYVRSYE-----GHHMKDVFNIANMDLVQVAKNFGFTQPP 567
>gi|367016098|ref|XP_003682548.1| hypothetical protein TDEL_0F05260 [Torulaspora delbrueckii]
gi|359750210|emb|CCE93337.1| hypothetical protein TDEL_0F05260 [Torulaspora delbrueckii]
Length = 655
Score = 213 bits (542), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 156/502 (31%), Positives = 266/502 (52%), Gaps = 43/502 (8%)
Query: 367 KEKREEEPILSQKRFDECGISPLTI-KALTAAGYIQMTRVQEATLSACL--EGKDAVVKA 423
KE+ EE L Q E G+ T+ K+++ + +T VQ+ T+ + E +D + +A
Sbjct: 87 KEENAEEITLDQ--LQEEGLLDKTLHKSISRMNFTGLTSVQQKTIKPIVQSEEQDVIARA 144
Query: 424 KTGTGKSIAFLLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHD 483
KTGTGK+ AFL+P + ++ S + +I+ PTR+LA QI E + +++
Sbjct: 145 KTGTGKTFAFLIPIFQHLINTRRDSQYM----VKCVIVAPTRDLALQIETEVHKIHEHNY 200
Query: 484 GI---GVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVL 540
+ G ++LVGGT F R++ S I++ATPGRL+ ++ + + + K +L
Sbjct: 201 ALKKFGCVSLVGGTNFGSAMRKMSSVRPNIVIATPGRLMAVLDQYADRYFKFVDFK--IL 258
Query: 541 DEADHLLDLGFRKDVENIVDCL-------PRRRQSLLFSATM-------PKELVLKREHT 586
DEAD LL++GF++D+E+I D L P ++LLFSAT+ +++ K E
Sbjct: 259 DEADRLLEIGFKEDLESISDTLNEINDKSPDHIRTLLFSATLDDKVQKLASKIMNKDECV 318
Query: 587 YIDTVGLGSVETPVKIKQSCLVA---PHELHFQILHHLLKEHILGTPDYKVIVFCSTGMV 643
++DTV E KI+QS +++ H ++ + H +K+ ++ P+YK I+F T
Sbjct: 319 FLDTVDKNEPEAHEKIEQSMVISERMAHSIYAAVDH--IKQKMVSEPNYKAILFTPTVKF 376
Query: 644 TSLLYLLLRE---MKMNVREMYSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDV 700
T L +LR K+ V E + + Q R + +F+ K +LV +DV ARGMD+P+V
Sbjct: 377 TRFLSAILRRELRSKLPVLEFHGQIDQRRRTNLVNQFKRDKSGLLVCTDVGARGMDFPNV 436
Query: 701 TSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLAPWEEYFLDDL---KDLPLDKLQLP 757
T V+Q+G+P + YIHR+GRT R G+EG + L E F+D L K + + K++
Sbjct: 437 TEVLQIGVPSELANYIHRIGRTARGGQEGSSKIFLCEEEMPFVDTLLRRKKVEI-KIKEE 495
Query: 758 HLNPEIQLQMDNHMAKIDNNVKEAAYHAWLGYYNSIREIG-RDKTTLVELANKFAQSIG- 815
++ E + + + D + EA Y ++++E G ++ L E+A+ F +
Sbjct: 496 YVPTEETVAAFSEEVRDDELLTEAITSLISFYRSALKEYGFHERRLLPEVASTFGLLLND 555
Query: 816 LQRPPPLFRKTAL-KMGLKDIP 836
QR P+ + L ++G P
Sbjct: 556 EQRKIPIHSRNVLERLGFSRSP 577
>gi|378726604|gb|EHY53063.1| hypothetical protein HMPREF1120_01264 [Exophiala dermatitidis
NIH/UT8656]
Length = 864
Score = 213 bits (542), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 151/458 (32%), Positives = 241/458 (52%), Gaps = 36/458 (7%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F + +S T L A+ + MT +Q T+ L+G D + AKTG+GK++AFL+P +E
Sbjct: 54 FTDLPLSAATQDGLAASHFKTMTTIQSRTIPLALQGADILGAAKTGSGKTLAFLVPVLEN 113
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+ + + L LIL PTRELA QI + +NH L ++GG + ++
Sbjct: 114 LYRKRWTGYDGL----GALILSPTRELAIQIFEVLRKVGRNHTFSAGL-VIGGKSLQEER 168
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
RL ILVATPGR+L H++ + L + L+MLVLDEAD ++D+GF+ ++ +++
Sbjct: 169 DRLGR--MNILVATPGRMLQHMDQTAELDI--GNLQMLVLDEADRIMDMGFKATLDALIE 224
Query: 561 CLPRRRQSLLFSATMPKELV-LKR----EHTYIDTVGLGSVETPVKIKQSCLVAPHELHF 615
LPR RQ+L+FSAT K + L R + ++ TP ++Q+ +V P
Sbjct: 225 HLPRERQTLMFSATQTKRVSDLARLSLTDPEFVSVHEGAESATPSTLQQNYIVTPLAEKL 284
Query: 616 QILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVR--EMYSRKPQLYRDRI 673
+L ++ ++ K++VF S+G +Y R ++ + ++ R+ Q R I
Sbjct: 285 DVLWSFIRANV----KKKILVFLSSGKQVRFVYEAFRHLQPGIPLLHLHGRQKQTARLDI 340
Query: 674 SEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVL 733
+ +F SK L ++DV+ARG+D+P V VVQV P D E YIHR+GRT R ++G V+
Sbjct: 341 TTKFSNSKYACLFSTDVAARGLDFPSVDWVVQVDCPEDAETYIHRVGRTARYERDGRAVM 400
Query: 734 LLAPWEEYFLDDLKDLPLDKLQLPHLN-------PEIQLQMDNHMAKIDNNVKEAAYHAW 786
+ P EE + LK L K+ + +N I+ Q+ N M D +K A+
Sbjct: 401 FVDPSEEEGM--LKALERKKVTVEKINVRQKKMQQTIKTQLQN-MCFKDPELKYLGQKAF 457
Query: 787 LGYYNSIREIGRDKTTL----VELANKFAQSIGLQRPP 820
+ Y S+ + +DK T ++L FA S+GL P
Sbjct: 458 VSYVRSV-HVQKDKETFDLKKLDL-EAFAASLGLPGTP 493
>gi|335428790|ref|ZP_08555700.1| putative ATP-dependent RNA helicase [Haloplasma contractile
SSD-17B]
gi|335430826|ref|ZP_08557712.1| putative ATP-dependent RNA helicase [Haloplasma contractile
SSD-17B]
gi|334887366|gb|EGM25698.1| putative ATP-dependent RNA helicase [Haloplasma contractile
SSD-17B]
gi|334891731|gb|EGM29977.1| putative ATP-dependent RNA helicase [Haloplasma contractile
SSD-17B]
Length = 528
Score = 213 bits (542), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 134/365 (36%), Positives = 196/365 (53%), Gaps = 21/365 (5%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
K+F+E IS +++ G+++ T +Q + LEG D + +A+TGTGK+ AF +P I
Sbjct: 3 KKFNELEISDQIKQSIAEMGFVEPTPIQAEAIPYILEGNDIIGQAQTGTGKTAAFSIPLI 62
Query: 439 EAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
E + S I +ILCPTRELA Q+ E L K +G+ V+ + GG + +
Sbjct: 63 EKLDLNNRS--------IQGIILCPTRELAIQVTDEIRKLTKYVEGVKVVPIYGGQSYNI 114
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
+ L+ P QI+V TPGR++DHI K+ V+L +KML+LDEAD +L +GFR+D+E I
Sbjct: 115 QLKALKRKP-QIVVGTPGRVIDHINRKT---VKLENIKMLILDEADEMLKMGFREDLEYI 170
Query: 559 VDCLPRRRQSLLFSATMPKELVLKREHTYIDTVGLGSVE----TPVKIKQSCLVAPHELH 614
+ P RQ+ LFSATMPK + + Y L +E T IKQ +
Sbjct: 171 LQKTPTERQTTLFSATMPKA-IQDIANKYQKKPKLIQIERKSLTVDNIKQEYFELNNNQK 229
Query: 615 FQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRIS 674
F +L LL + + IVFC+T L + L+E ++ Q RDR+
Sbjct: 230 FDLLVRLLDHNHYQSA----IVFCNTKREVDELVVRLQEHNYMTEALHGDLKQQQRDRVM 285
Query: 675 EEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLL 734
FR ILV +DV+ARG+D +V +V IP D E Y+HR+GRTGR G+ G
Sbjct: 286 NSFRNKNIKILVATDVAARGIDVNNVEAVFNYDIPLDDEAYVHRIGRTGRAGQSGASYTF 345
Query: 735 LAPWE 739
+ P +
Sbjct: 346 INPKQ 350
>gi|187929488|ref|YP_001899975.1| DEAD/DEAH box helicase [Ralstonia pickettii 12J]
gi|404396603|ref|ZP_10988397.1| hypothetical protein HMPREF0989_03294 [Ralstonia sp. 5_2_56FAA]
gi|187726378|gb|ACD27543.1| DEAD/DEAH box helicase domain protein [Ralstonia pickettii 12J]
gi|348613693|gb|EGY63272.1| hypothetical protein HMPREF0989_03294 [Ralstonia sp. 5_2_56FAA]
Length = 493
Score = 213 bits (542), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 133/382 (34%), Positives = 202/382 (52%), Gaps = 10/382 (2%)
Query: 372 EEPILSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSI 431
E P FD G+ P ++ALT +GY + T +Q A + G D + A+TGTGK+
Sbjct: 6 EAPANESVTFDSFGLHPDVLRALTESGYTKPTPIQAAAIPVVTAGHDVMGAAQTGTGKTA 65
Query: 432 AFLLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLV 491
F LP I +L ++S + P+ LIL PTRELA Q+ + +A + + +
Sbjct: 66 GFSLPIIHNLLPDANTSASPARHPVRALILTPTRELADQVY-DNVAKYAKYTALRSAVVF 124
Query: 492 GGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGF 551
GG +L +ILVATPGRLLDH++ +S V L ++MLVLDEAD +LD+GF
Sbjct: 125 GGVDMNPQTEQLRRG-VEILVATPGRLLDHVQQRS---VNLSQVRMLVLDEADRMLDMGF 180
Query: 552 RKDVENIVDCLPRRRQSLLFSATMPKELVLKREHTYI---DTVGLG-SVETPVKIKQSCL 607
D++ I++ LP RQ+LLFSAT E + + +Y+ T+ + S T ++Q
Sbjct: 181 LPDLQRIINLLPAHRQTLLFSATFSPE-IKRLAASYLRHPQTIEVARSNATAENVRQVIY 239
Query: 608 VAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQ 667
P L HLL++ + IVF ++ + S L L +N ++ K Q
Sbjct: 240 TVPDNHKQAALVHLLRQRAEQGLPRQCIVFSNSKIGCSRLARALEREGINANAIHGDKTQ 299
Query: 668 LYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGK 727
R + E F+ +LV +DV+ARG+D + V+ +P + E Y+HR+GRTGR G
Sbjct: 300 TERMQTLEAFKQGTVDVLVATDVAARGLDISQMPCVINFDLPFNAEDYVHRIGRTGRAGA 359
Query: 728 EGEGVLLLAPWEEYFLDDLKDL 749
G+ + L AP +E L D++ L
Sbjct: 360 SGDALSLFAPGDERLLADIEKL 381
>gi|354543386|emb|CCE40105.1| hypothetical protein CPAR2_101430 [Candida parapsilosis]
Length = 578
Score = 213 bits (542), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 159/461 (34%), Positives = 253/461 (54%), Gaps = 42/461 (9%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F++ S T+KA+ G+ +MT+VQ T+ L G+D + AKTG+GK++AFL+PAIE
Sbjct: 114 FEKADFSEPTMKAIREMGFTKMTKVQAKTIPPLLAGRDVLGAAKTGSGKTLAFLIPAIEL 173
Query: 441 V--LKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHD-GIGVLTLVGGTRFK 497
+ LK + T V+I+ PTRELA QI A L+++H G++ +GG +
Sbjct: 174 MYSLKIKPRNGTA------VIIITPTRELALQIFGVARQLMEHHSQTCGIV--IGGADRR 225
Query: 498 VDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVEN 557
+ +L + +LVATPGRLLDH++N G LK L++DEAD +L++GF ++++
Sbjct: 226 QEATKL-AKGVNLLVATPGRLLDHLKNTQGFV--FSNLKALIIDEADRILEIGFEEEMKQ 282
Query: 558 IVDCLPRR-RQSLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSCLVAP 610
I+ LP RQ++LFSAT + + L+ YI+ V V T ++Q +V
Sbjct: 283 IIKILPNEDRQTMLFSATQTTKVEDLARISLRPGPLYINVVSERDVSTADGLEQGYVVCD 342
Query: 611 HELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYR 670
+ F +L LK ++ K+IVF S+ LL + + V +++ ++ Q R
Sbjct: 343 SDKRFLLLFSFLKRNV----KKKIIVFLSSCNSVKFYSELLNYIDLPVLDLHGKQKQQKR 398
Query: 671 DRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGE 730
EF +K+ ILV +DV+ARG+D P V +VQ P D YIHR+GRT R G +G+
Sbjct: 399 TNTFFEFCNAKQGILVCTDVAARGLDIPAVDWIVQFDPPDDPRDYIHRVGRTAR-GTQGK 457
Query: 731 G--VLLLAPWEEYFLDDLK--DLPLDKLQLP-HLNPEIQLQMDNHMAKIDNNVKEAA--- 782
G ++ L P E FL LK ++PL++ + P + +Q Q+ + K + + ++A
Sbjct: 458 GKSLMFLTPSELGFLRYLKAANVPLNEYEFPANKIANVQSQL-TKLIKTNYLLHQSAKDG 516
Query: 783 YHAWLGYY--NSIREIGR-DKTTLVELANKFAQSIGLQRPP 820
Y A+L Y +S++ + + DK LV K +S G PP
Sbjct: 517 YRAYLQAYASHSLKTVYQIDKLDLV----KVGKSFGFDVPP 553
>gi|403216428|emb|CCK70925.1| hypothetical protein KNAG_0F02610 [Kazachstania naganishii CBS
8797]
Length = 762
Score = 213 bits (542), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 160/499 (32%), Positives = 260/499 (52%), Gaps = 47/499 (9%)
Query: 352 RKEISKNKLNGNGEKKEKREEE--PILSQKRF-DECGISPLTIKALTAAGYIQMTRVQEA 408
RK++ +NK N E+ KR +E P L + F + + +K L+A+ ++++T +Q
Sbjct: 12 RKQL-RNKENEYIEELNKRTQEYDPKLQRATFFKDLPLCRNVLKGLSASAFVKLTAIQRE 70
Query: 409 TLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELA 468
++ L+G D + AKTG+GK++AFL+P +E + + + L LI+ PTRELA
Sbjct: 71 SIPVSLQGHDVLAAAKTGSGKTLAFLVPVLEKLYRERWTEFDGL----GALIISPTRELA 126
Query: 469 SQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGL 528
QI E + + + ++GG K + R+ IL+ TPGR+L H++ GL
Sbjct: 127 MQIY-EVLVKVGSQCSFSAGLVIGGKDVKYESERISK--INILIGTPGRILQHLDQAVGL 183
Query: 529 SVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQSLLFSATMPKELVLKREHTYI 588
+ L+MLVLDEAD LD+GF+K ++ IV LP RQ+LLFSAT L +
Sbjct: 184 NAS--NLQMLVLDEADRCLDMGFKKTLDAIVGNLPPMRQTLLFSATQSASLADLARLSLT 241
Query: 589 DTVGLGSVET-------------PVKIKQSCLVAPHELHFQILHHLLKEHILGTPDYKVI 635
D +G++ET P ++Q + IL +K H+ K+I
Sbjct: 242 DYKNIGTLETGSGQQVGAANPATPDTLQQYYIDVSLPDKLDILFSFIKSHL----KSKMI 297
Query: 636 VFCSTGMVTSLLYLLLREMK--MNVREMYSRKPQLYRDRISEEFRASKRLILVTSDVSAR 693
VF S+G +Y R+M+ +++ ++ R+ Q R ++F ++++ L +DV AR
Sbjct: 298 VFLSSGKQVHFIYETFRKMQPGISLMHLHGRQKQTARTDTLDKFVRAQQVCLFATDVVAR 357
Query: 694 GMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLAPWE-EYFLDDLKDLPLD 752
G+D+P V VVQV P D + YIHR+GR+ R GK+G+ +++L P E + FL LK
Sbjct: 358 GIDFPAVDWVVQVDCPEDADTYIHRVGRSARYGKKGKALIMLTPQEMDPFLSRLK---TK 414
Query: 753 KLQLPHLNPEIQL------QMDNHMAKIDNNVKEAAYHAWLGYYNSIREIGRDKTTLV-- 804
K++ LN + Q+ + + K D +K A A++ Y SI + +DK
Sbjct: 415 KIEPEKLNIKQSKKKSIKPQLQSLLFK-DPELKYLAQKAFISYIRSIY-VQKDKEVFKFN 472
Query: 805 EL-ANKFAQSIGLQRPPPL 822
E+ +FA S+GL P +
Sbjct: 473 EIPTEEFANSLGLPGAPKI 491
>gi|300742137|ref|ZP_07072158.1| ATP-dependent RNA helicase DeaD [Rothia dentocariosa M567]
gi|300381322|gb|EFJ77884.1| ATP-dependent RNA helicase DeaD [Rothia dentocariosa M567]
Length = 719
Score = 213 bits (541), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 150/449 (33%), Positives = 226/449 (50%), Gaps = 22/449 (4%)
Query: 352 RKEISKNKLNGNGEKKEKREEEPILSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLS 411
R++ + K N E EEE RF + G+ P + AL GY + + +QE T+
Sbjct: 105 REDNAATKKNTEDNTHESHEEEGT----RFTDLGLDPRVLSALEEVGYEKPSPIQEQTIP 160
Query: 412 ACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQI 471
L+G D V A+TGTGK+ AF LPA+ + A + + VL+L PTRELA Q+
Sbjct: 161 PLLDGNDVVGLAQTGTGKTAAFALPALSRM--AELADINGVSRDTQVLVLAPTRELALQV 218
Query: 472 AAEAIALLKNH-DGIGVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSV 530
A EA + H + VL + GG+ + L Q++V TPGR++DH+E S +
Sbjct: 219 A-EAFSSYATHMEDFTVLPIYGGSPYGPQLAGLRRG-AQVVVGTPGRVIDHLEKGS---L 273
Query: 531 RLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQSLLFSATMPKELVLKREHTYIDT 590
L L+ LVLDEAD +L +GF +DVE I++ P +Q LFSATMP + K Y++
Sbjct: 274 DLSNLQYLVLDEADEMLRMGFAEDVETILEGTPDAKQVALFSATMPNS-IRKIAQQYLND 332
Query: 591 VGLGSVETPVKIKQSCLVAPHELHFQILH-HLLKE--HILGTPDYK-VIVFCSTGMVTSL 646
E VK K + + + Q++H H L +L +Y +IVF T T
Sbjct: 333 ----PTEVRVKTKTTTGANIRQRYMQVMHSHKLDAMTRVLEVENYDGIIVFVRTKKETEE 388
Query: 647 LYLLLREMKMNVREMYSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQV 706
+ L+ + PQ R+R + R + ILV +DV+ARG+D ++ VV
Sbjct: 389 VADKLKARGFQAAAINGDIPQQLRERTVDALRDGRIDILVATDVAARGLDVERISLVVNY 448
Query: 707 GIPPDREQYIHRLGRTGREGKEGEGVLLLAPWEEYFLDDLKDLPLDKLQLPHLNPEIQLQ 766
IP D E Y+HR+GRTGR G++GE +L + P E+Y L ++ K++ H+ P Q
Sbjct: 449 DIPHDTESYVHRIGRTGRAGRDGEAILFVTPREKYMLRQIEKATRQKVEPMHM-PTAQDV 507
Query: 767 MDNHMAKIDNNVKEAAYHAWLGYYNSIRE 795
+ + + E L ++ I E
Sbjct: 508 NSSRKQRFAEQITETIETEDLNFFRKIIE 536
>gi|397905196|ref|ZP_10506067.1| Cold-shock DEAD-box protein A [Caloramator australicus RC3]
gi|397161845|emb|CCJ33401.1| Cold-shock DEAD-box protein A [Caloramator australicus RC3]
Length = 526
Score = 213 bits (541), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 147/439 (33%), Positives = 238/439 (54%), Gaps = 27/439 (6%)
Query: 376 LSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLL 435
+ + +F+E +S +KA+ GY + T +Q T+ L+GKD + +A+TGTGK+ AF +
Sbjct: 1 MEKIKFEELNLSKEILKAIEELGYEEATPIQAKTIPIILQGKDIIGQAQTGTGKTAAFGI 60
Query: 436 PAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTR 495
P +E + S T Q LILCPTRELA Q++ E L K IG+L + GG
Sbjct: 61 PTLERI--DPSKKTIQ------ALILCPTRELAIQVSEELKKLSKYKKAIGILPIYGGQS 112
Query: 496 FKVDQRRLES--DPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRK 553
+R+++S I++ TPGR +DHIE + ++L +K+ +LDEAD +L++GF +
Sbjct: 113 I---ERQIQSLKKGVNIIIGTPGRCIDHIERGT---LKLEDIKLFILDEADEMLNMGFIE 166
Query: 554 DVENIVDCLPRRRQSLLFSATMPKELVLKREHTYI---DTVGLGSVETPVKIKQSCLVAP 610
D+E I+D P+ +Q+LLFSATMP + +LK Y+ + + + E V +
Sbjct: 167 DIEFILDKTPKDKQTLLFSATMP-DPILKLTKKYLKNPEHIKVVHKELTVPTIEQIYFEV 225
Query: 611 HELH-FQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLY 669
E H +IL LL + P +VFC+T + L+ ++ Q
Sbjct: 226 KEAHKIEILSRLLD---IYNPKL-ALVFCNTKKKVDEVVSSLQARGYLADALHGDMKQNQ 281
Query: 670 RDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEG 729
RDR+ +FR+ +LV +DV+ARG+D DV V +P D E Y+HR+GRTGR G+EG
Sbjct: 282 RDRVMAKFRSGTIDVLVATDVAARGIDVEDVEIVFNYDVPQDEEYYVHRIGRTGRAGREG 341
Query: 730 EGVLLLAPWEEYFLDDLKDLPLDKLQLPHLNPEIQLQMDNHMAKIDNNVKEAAYHAWLGY 789
+ ++ + Y L D++ K++L + P + ++ +KI + +KE+ L
Sbjct: 342 KAFTFVSGKDIYKLRDIQRYTKTKIKLQKI-PTLHDVEESRTSKIIDRIKESINEGNLEK 400
Query: 790 YNSIRE-IGRDKTTLVELA 807
Y+ I E I D+ T +++A
Sbjct: 401 YSDIIERIIDDEYTSLDVA 419
>gi|28571808|ref|NP_732694.2| pitchoune, isoform B [Drosophila melanogaster]
gi|28571809|ref|NP_524446.3| pitchoune, isoform A [Drosophila melanogaster]
gi|33860195|sp|Q9VD51.2|DDX18_DROME RecName: Full=Probable ATP-dependent RNA helicase pitchoune
gi|17945959|gb|AAL49024.1| RE48840p [Drosophila melanogaster]
gi|21429110|gb|AAM50274.1| LD46167p [Drosophila melanogaster]
gi|28381409|gb|AAF55951.2| pitchoune, isoform A [Drosophila melanogaster]
gi|28381410|gb|AAN13900.2| pitchoune, isoform B [Drosophila melanogaster]
gi|220946416|gb|ACL85751.1| pit-PA [synthetic construct]
gi|220956056|gb|ACL90571.1| pit-PA [synthetic construct]
Length = 680
Score = 213 bits (541), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 148/453 (32%), Positives = 247/453 (54%), Gaps = 35/453 (7%)
Query: 385 GISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKA 444
+S T++A+ G+ +MT +Q +L+ L+G+D V A+TG+GK++AFL+PA+E + K
Sbjct: 193 AVSEATLRAIKEMGFTEMTEIQSKSLTPLLKGRDLVGAAQTGSGKTLAFLIPAVELINK- 251
Query: 445 TSSSTTQLVP--PIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRR 502
+ +P V+I+ PTREL+ Q L+ +H L + GG+ +V+ +
Sbjct: 252 -----LRFMPRNGTGVIIISPTRELSMQTFGVLKELMAHHHHTYGLVM-GGSNRQVESEK 305
Query: 503 LESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCL 562
L ILVATPGRLLDH++N + L+ L++DE D +L++GF ++++ I++ L
Sbjct: 306 L-GKGINILVATPGRLLDHLQNSPDFLYK--NLQCLIIDEVDRILEIGFEEELKQIINLL 362
Query: 563 PRRRQSLLFSATMP------KELVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQ 616
P+RRQ++LFSAT +L LK E Y+ T ++Q +V P E
Sbjct: 363 PKRRQTMLFSATQTARIEALSKLALKSEPIYVGVHDNQDTATVDGLEQGYIVCPSEKRLL 422
Query: 617 ILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEE 676
+L LK++ KV+VF S+ M + L + + V ++ ++ Q R +
Sbjct: 423 VLFTFLKKN----RKKKVMVFFSSCMSVKYHHELFNYIDLPVTSIHGKQKQTKRTTTFFQ 478
Query: 677 FRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGR-EGKEGEGVLLL 735
F ++ IL+ +DV+ARG+D P V +VQ P D +YIHR+GRT R G G +LL+
Sbjct: 479 FCNAESGILLCTDVAARGLDIPQVDWIVQYDPPDDPREYIHRVGRTARGSGTSGHALLLM 538
Query: 736 APWEEYFLDDLK--DLPLDKLQLPHLN-PEIQLQMDNHMAK---IDNNVKEAAYHAWLGY 789
P E FL LK +PL++ + +IQLQ++ +AK ++ + KE A+ +++
Sbjct: 539 RPEELGFLRYLKAAKVPLNEFEFSWQKIADIQLQLEKLIAKNYFLNQSAKE-AFKSYVRA 597
Query: 790 YNS--IREIGRDKTTLVELANKFAQSIGLQRPP 820
Y+S +++I T ++ A+S G PP
Sbjct: 598 YDSHQLKQIFNVNTLDLQAV---AKSFGFLVPP 627
>gi|154286470|ref|XP_001544030.1| hypothetical protein HCAG_01076 [Ajellomyces capsulatus NAm1]
gi|150407671|gb|EDN03212.1| hypothetical protein HCAG_01076 [Ajellomyces capsulatus NAm1]
Length = 721
Score = 213 bits (541), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 141/433 (32%), Positives = 228/433 (52%), Gaps = 30/433 (6%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F + +S T L+A + +T +Q + L+G+D + AKTG+GK++AFL+P +E
Sbjct: 51 FSDLPLSEPTADGLSACHFKSLTDIQARAIPHALKGRDILGAAKTGSGKTLAFLVPLLEL 110
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+ + + L L+L PTRELA QI E + + H ++GG + +Q
Sbjct: 111 LYRKQWTEYDGL----GALVLSPTRELAIQIF-EVLRKIGRHHTFSAGLVIGGKGLQEEQ 165
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
RL ILV TPGR+L H++ + +++LVLDEAD ++D+GF+ V+ I+D
Sbjct: 166 ERL--GKMNILVCTPGRMLQHMDQTAAFDTN--HIQLLVLDEADRIMDMGFQSTVDAIID 221
Query: 561 CLPRRRQSLLFSATMPKEL-----VLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHF 615
LP+ RQ++LFSAT K++ + R+ Y+ + TP K++Q+ ++ P
Sbjct: 222 HLPKERQTMLFSATQTKKVSDLARLSLRDPEYVSVHETAASATPAKLQQNYIITPLPEKL 281
Query: 616 QILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK--MNVREMYSRKPQLYRDRI 673
L ++ + K+IVF S+G +Y R M+ + + ++ R+ Q R I
Sbjct: 282 DTLWSFIRSSL----KSKIIVFFSSGKQVRFVYESFRHMRPGIPLLHLHGRQKQGARVDI 337
Query: 674 SEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVL 733
+++F A+K L +D++ARG+D+P V V+QV P D + YIHR GRT R + G VL
Sbjct: 338 TKKFSAAKYSCLFATDIAARGLDFPAVDWVIQVDCPEDADTYIHRAGRTARYERNGRAVL 397
Query: 734 LLAPWEEYFLDDLKDLPLDKLQLPHLN------PEIQLQMDNHMAKIDNNVKEAAYHAWL 787
L P EE + LK L K+ + +N I+ Q+ N M D ++K A++
Sbjct: 398 FLEPSEEAGM--LKRLEQKKIPIEKINVRSKKQQSIKNQLQN-MCFKDPSLKYLGQKAFI 454
Query: 788 GYYNSIREIGRDK 800
Y SI + RDK
Sbjct: 455 SYVKSI-HVQRDK 466
>gi|344304870|gb|EGW35102.1| hypothetical protein SPAPADRAFT_69435 [Spathaspora passalidarum
NRRL Y-27907]
Length = 755
Score = 213 bits (541), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 144/460 (31%), Positives = 244/460 (53%), Gaps = 34/460 (7%)
Query: 380 RFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIE 439
+F + I+ T++ L A ++ +T +Q T+ L+G+D + A+TG+GK++AFL+P IE
Sbjct: 47 QFSDLPITQNTLQGLKEANFVSLTDIQRKTIPIALKGEDVMGTARTGSGKTLAFLVPTIE 106
Query: 440 AVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVD 499
++++ + L LI+ PTRELA QI E + + ++ + GG K +
Sbjct: 107 SLIRNKITEFDGLA----ALIVSPTRELAVQIF-EVLTKIGKYNQFSAGLVTGGKDVKYE 161
Query: 500 QRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIV 559
+ R+ ILV TPGR+ H+ G+ L++LVLDEAD LD+GF+K ++NI+
Sbjct: 162 KERVSR--MNILVGTPGRISQHLNEAVGMETS--NLQVLVLDEADRCLDMGFKKQIDNIL 217
Query: 560 DCLPRRRQSLLFSATMPKEL--VLKREHTYIDTVGLGSVE----TPVKIKQSCLVAPHEL 613
LP RQ+LLFSAT + + + T +G+ S + TP ++Q + P +
Sbjct: 218 GHLPPTRQTLLFSATQSDNVKDLARLSLTNPQRIGVSSDQEISATPESLEQYYVKVPLDE 277
Query: 614 HFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK--MNVREMYSRKPQLYRD 671
+L +K H+ K++VF S+ Y R ++ +++ ++Y R Q R
Sbjct: 278 KLDVLWSFIKSHLKS----KILVFFSSSKQVQYTYETFRTLQPGISLLKLYGRHKQTSRL 333
Query: 672 RISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEG 731
+ +F ++ L +D+ ARG+D+P + VVQV P D Y+HR+GR+ R G++G+
Sbjct: 334 ETTMKFSQAQYACLFATDIVARGLDFPAIDWVVQVDCPEDAATYVHRVGRSARFGRQGKS 393
Query: 732 VLLLAPWEEYFLDDLKDLPLDKLQLPHLN------PEIQLQMDNHMAKIDNNVKEAAYHA 785
+++L P EE + LK L + K+ +N I+ Q+ + K D +K A
Sbjct: 394 LMMLLPSEEEGM--LKRLKIHKIDPKFMNIKQKSKKSIRPQLQSLCFK-DPTIKNLGQRA 450
Query: 786 WLGYYNSIREIGRDKTT--LVEL-ANKFAQSIGLQRPPPL 822
++ Y+ S+ I +DK + EL A KFA S+GL P +
Sbjct: 451 FISYFRSVH-IQKDKDIFKIDELPAEKFAASLGLPGAPKI 489
>gi|357620542|gb|EHJ72693.1| hypothetical protein KGM_04294 [Danaus plexippus]
Length = 618
Score = 213 bits (541), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 157/465 (33%), Positives = 246/465 (52%), Gaps = 33/465 (7%)
Query: 375 ILSQKRFD--ECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIA 432
ILS ++F E I T+ + G+ MT +Q + LEG+D V A+TG+GK++A
Sbjct: 120 ILSDQKFTALEGKICEATLMGIKDMGFTTMTEIQAKAIPPLLEGRDLVGAARTGSGKTLA 179
Query: 433 FLLPAIEAV--LKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTL 490
FL+PAI+ + LK + T V+IL PTREL+ Q + L+K H L +
Sbjct: 180 FLIPAIDLIYKLKFKPRNGTG------VIILSPTRELSMQTFGVLMELMKYHHHTYGLVM 233
Query: 491 VGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLG 550
G R Q+ S ILVATPGRLLDH++N + L+ LV+DEAD +L++G
Sbjct: 234 GGANRSTEAQKL--SKGINILVATPGRLLDHLQNTPDFLYK--NLQCLVIDEADRILEIG 289
Query: 551 FRKDVENIVDCLPRRRQSLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQ 604
F ++V+ I+ LP+RRQ++LFSAT K+ L +K E Y+ T ++Q
Sbjct: 290 FEEEVKQIIRLLPKRRQTMLFSATQTKKTESLTALAVKHEPVYVGVDDHREQATVDSLEQ 349
Query: 605 SCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSR 664
+V P E +L LK++ KV+VF ST M + L + + V ++ +
Sbjct: 350 GYIVCPSEKRMMVLFTFLKKN----RKKKVMVFLSTCMSVKYHHELFNYIDLPVMSIHGK 405
Query: 665 KPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGR 724
+ Q R +F ++ IL+ +DV+ARG+D P V +VQ P D ++YIHR+GRT R
Sbjct: 406 QQQAKRTTTFFQFCNAESGILLCTDVAARGLDIPAVDWIVQYDPPDDPKEYIHRVGRTAR 465
Query: 725 E-GKEGEGVLLLAPWEEYFLDDLKD--LPLDKLQLP-HLNPEIQLQMDNHMAK---IDNN 777
G G +L L P E FL LK + L++ + + +IQLQ++ +++ ++ +
Sbjct: 466 GLGTSGHALLFLRPEELGFLRYLKQSKVTLNEFEFSWNKVADIQLQLEKLISRNYFLNQS 525
Query: 778 VKEAAYHAWLGYYNSIREIGRDKTTLVELANKFAQSIGLQRPPPL 822
KE A+ ++L Y+S ++LA K ++S G PP +
Sbjct: 526 AKE-AFKSYLRAYDSHHLKTIFDIDTIDLA-KVSKSFGFTVPPAV 568
>gi|449524338|ref|XP_004169180.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 51-like [Cucumis
sativus]
Length = 579
Score = 213 bits (541), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 145/451 (32%), Positives = 244/451 (54%), Gaps = 36/451 (7%)
Query: 362 GNGEKKEKREEEP----ILSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGK 417
G GEK +K++ + I+S FD +S T++A+ G+ MT++Q+ + L GK
Sbjct: 71 GRGEKNQKKKVKTGGSGIMSTVSFDSLELSENTLRAIKDMGFEHMTQIQDRAIPPFLAGK 130
Query: 418 DAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIA 477
D + A+TG+GK++AFL+PA+E + + + + V+++CPTRELA QI A
Sbjct: 131 DVLGAARTGSGKTLAFLIPAVELLQRISFTPYNG----TGVIVICPTRELAIQIHEVANE 186
Query: 478 LLKNHD-GIGVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLK 536
LLK H +G++T GG+ + + + + +L+ATPGRLLDH+++ + LK
Sbjct: 187 LLKYHSQTLGIVT--GGSSRQAEANHI-TRGVNLLIATPGRLLDHLQHTKNFVFK--NLK 241
Query: 537 MLVLDEADHLLDLGFRKDVENIVDCLPRRRQSLLFSATMPKE------LVLKREHTYIDT 590
L++DEAD +L+ F ++++ I+ LP+ RQ+ LFSAT ++ L + YID
Sbjct: 242 CLIIDEADRILETNFEEEMKQIIKLLPKNRQTALFSATQTQKVEDLVRLSFQSTPVYIDV 301
Query: 591 VGLGSVETPVKIKQSCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLL 650
+ T ++Q V P F +L+ LK + KV+VF S+ + L
Sbjct: 302 DDGRTKVTNEGLQQGYCVVPSAKRFIVLYSFLKRSL----SKKVMVFFSSCNSVTFHADL 357
Query: 651 LREMKMNVREMYSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPP 710
LR +K++ +++ ++ Q R F +++ IL+ +DV+ARG+D P V +VQ P
Sbjct: 358 LRHIKIDCMDIHGKQKQQKRTSTFFAFNKAEKGILLCTDVAARGLDIPAVDWIVQYDPPD 417
Query: 711 DREQYIHRLGRTGR-EGKEGEGVLLLAPWEEYFLDDLK--DLPLDKLQLPHLNPEIQLQM 767
+ ++YIHR+GRT R EG +G +L L P E FL LK +P+ + + + + +
Sbjct: 418 EPKEYIHRVGRTARGEGSKGNALLFLIPEELQFLRYLKAAKVPVKEYE---FSDKRLANV 474
Query: 768 DNHMAKID------NNVKEAAYHAWLGYYNS 792
+H+ K+ N + AY +L YNS
Sbjct: 475 QSHLEKLVGSNYHLNKAAKDAYRTYLLAYNS 505
>gi|358636156|dbj|BAL23453.1| ATP-dependent RNA helicase [Azoarcus sp. KH32C]
Length = 480
Score = 213 bits (541), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 137/393 (34%), Positives = 212/393 (53%), Gaps = 40/393 (10%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F + G+ P ++A+ GY T +Q+ + L G+D + A+TGTGK+ F LP +
Sbjct: 3 FADLGLIPELLRAVADTGYTTPTPIQQQAIPVVLAGRDIMGGAQTGTGKTAGFTLPLLNR 62
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+ + S+ST+ P+ LIL PTRELA Q+ E++ + + + GG K
Sbjct: 63 LARHASASTSPARHPVRALILAPTRELAMQVF-ESVKTYSKYVPLRTTCIYGGVDMKPQI 121
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
+ L + +I+VATPGRLLDH++ K+ + L ++MLVLDEAD +LD+GF D+ I+D
Sbjct: 122 QELRNG-VEIVVATPGRLLDHVQQKT---IVLNQVEMLVLDEADRMLDMGFIPDIRRILD 177
Query: 561 CLPRRRQSLLFSATM--------------PKELVLKREHTYIDTVGLGSVETPVK--IKQ 604
LP RQSLLFSAT P+ + + R +T +T+ V PV +K+
Sbjct: 178 LLPASRQSLLFSATFSDEIKKLADQMLKEPQLIEVARRNTVSETIT--HVVHPVSAGLKR 235
Query: 605 SCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSR 664
+ LV HLL+ PD + +VF +T + L L + ++
Sbjct: 236 NLLV-----------HLLRHE----PDTQALVFVATKLACGRLAHFLERHDIAADAIHGD 280
Query: 665 KPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGR 724
K Q R E F++ K +LV +DV+ARG+D D+ SV+ +P E Y+HR+GRTGR
Sbjct: 281 KGQSQRTEALEAFKSGKLRVLVATDVAARGLDIDDLPSVINFELPHTAEDYVHRIGRTGR 340
Query: 725 EGKEGEGVLLLAPWEEYFLDDLKDLPLDKLQLP 757
G++G V L++ E++ L D++ L KLQ+P
Sbjct: 341 AGRKGRAVSLVSSEEKHLLADIEK--LIKLQIP 371
>gi|405118333|gb|AFR93107.1| ATP-dependent RNA helicase HAS1 [Cryptococcus neoformans var.
grubii H99]
Length = 544
Score = 213 bits (541), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 155/455 (34%), Positives = 238/455 (52%), Gaps = 31/455 (6%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F +SP T A+ G+ MT VQ T+ L GKD + A+TG+GK++AFL+P++E
Sbjct: 68 FSTLNLSPPTTAAIERMGFETMTEVQARTIPPLLAGKDVLGAARTGSGKTMAFLVPSVEL 127
Query: 441 VLKATSSSTTQLVPP--IYVLILCPTRELASQIAAEAIALLKNHD-GIGVLTLVGGTRFK 497
+ ST + P V+I+ PTRELA QI A L+++H GVL +GG K
Sbjct: 128 L------STLRFKPVNGTGVIIISPTRELALQIFGVAKELMQDHSQTFGVL--MGGANRK 179
Query: 498 VDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVEN 557
+ +L ++VATPGRLLDH++N G + LK LV+DEAD +L++GF ++++
Sbjct: 180 AEADKLVKG-VNLIVATPGRLLDHLQNTKGFVFK--NLKALVIDEADRILEIGFEEEMKQ 236
Query: 558 IVDCLP-RRRQSLLFSATMPKELV------LKREHTYIDTVGLGSVETPVKIKQSCLVAP 610
I+ LP RQS+LFSAT ++ L+ YI+ T ++Q +V
Sbjct: 237 IIKLLPSENRQSMLFSATQTTKVTDLARISLRPGPLYINVDETKEASTADMLEQGYVVCE 296
Query: 611 HELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYR 670
+ F +L LK+++ KVIVF S+ LL + + V +++ ++ Q R
Sbjct: 297 SDQRFMLLFTFLKKNL----KKKVIVFFSSCNSVKYHAELLNYIDVPVLDLHGKQKQQKR 352
Query: 671 DRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGE 730
EF + IL+ +DV+ARG+D P V ++Q P D YIHR+GRT R GK G+
Sbjct: 353 TNTFFEFINAPAGILLCTDVAARGLDIPKVDWIIQFDPPDDPRDYIHRVGRTARAGKSGK 412
Query: 731 GVLLLAPWEEYFLDDLK--DLPLDKLQLPHLN-PEIQLQMDNHMAK--IDNNVKEAAYHA 785
+L L P E FL LK +PL++ Q P ++Q Q+++ ++K N Y +
Sbjct: 413 SLLFLLPSELGFLRFLKVAKVPLNEYQFPQKKVADVQKQLESLISKNHYLNTSARDGYRS 472
Query: 786 WLGYYNSIREIGRDKTTLVELANKFAQSIGLQRPP 820
+L Y S ++LA K ++ G PP
Sbjct: 473 YLQAYASYSLKKIFDVNKLDLA-KVGKAFGFAVPP 506
>gi|344171941|emb|CCA84567.1| ATP-dependent RNA helicase, deaD-box family [Ralstonia syzygii R24]
Length = 481
Score = 213 bits (541), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 131/373 (35%), Positives = 202/373 (54%), Gaps = 10/373 (2%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
FD G+ P ++AL +GY + T +Q A + + G+D + A+TGTGK+ F LP I+
Sbjct: 3 FDTFGLHPDILRALAESGYTRPTPIQAAAIPVVVAGRDVMGAAQTGTGKTAGFSLPIIQN 62
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+L ++S + P+ LIL PTRELA Q+ + +A + + + GG
Sbjct: 63 LLPEANTSASPARHPVRALILTPTRELADQVY-DNVAKYGKYTALRSAVVFGGVDMNPQT 121
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
+L +ILVATPGRLLDH++ +S V L ++MLVLDEAD +LD+GF D++ I++
Sbjct: 122 EQLRRG-VEILVATPGRLLDHVQQRS---VNLSQVRMLVLDEADRMLDMGFLPDLQRIIN 177
Query: 561 CLPRRRQSLLFSATMPKELVLKREHTYI---DTVGLG-SVETPVKIKQSCLVAPHELHFQ 616
LP RQ+LLFSAT E + K +Y+ T+ + S T ++Q P
Sbjct: 178 LLPAHRQTLLFSATFSPE-IKKLAASYLRHPQTIEVARSNATADNVRQVIYTVPDGHKQA 236
Query: 617 ILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEE 676
L HLL++ + IVF ++ + S L L +N ++ K Q R + E
Sbjct: 237 ALVHLLRQRAEQGLPSQCIVFSNSKIGCSRLARALEREGINANAIHGDKTQTERMQTLEA 296
Query: 677 FRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLA 736
F+ +LV +DV+ARG+D + V+ +P + E Y+HR+GRTGR G G+ + L A
Sbjct: 297 FKQGTVDVLVATDVAARGLDISQMPCVINFDLPFNAEDYVHRIGRTGRAGASGDALSLFA 356
Query: 737 PWEEYFLDDLKDL 749
P +E L D++ L
Sbjct: 357 PGDERLLADIEKL 369
>gi|334329846|ref|XP_001363225.2| PREDICTED: ATP-dependent RNA helicase DDX18 [Monodelphis domestica]
Length = 642
Score = 213 bits (541), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 151/448 (33%), Positives = 247/448 (55%), Gaps = 35/448 (7%)
Query: 390 TIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSST 449
T+KA+ G+ MT +Q ++ LEG+D + AKTG+GK++AFL+P+IE ++K
Sbjct: 161 TLKAIAEMGFTNMTEIQHKSIRPLLEGRDILAAAKTGSGKTLAFLIPSIELIVK------ 214
Query: 450 TQLVP--PIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDP 507
+ +P VLIL PTRELA Q L+ +H L ++GG+ + ++L ++
Sbjct: 215 LKFMPRNGTGVLILSPTRELAMQTFGVLKELMTHHVHTYGL-IMGGSNRSAEAQKL-ANG 272
Query: 508 CQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQ 567
I+VATPGRLLDH++N G + L+ LV+DEAD +L++GF ++++ I+ LP+RRQ
Sbjct: 273 INIIVATPGRLLDHMQNTPGFMFK--NLQCLVIDEADRILEVGFEEEMKQIIKLLPKRRQ 330
Query: 568 SLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILHHL 621
++LFSAT ++ + LK+E Y+ T ++Q +V P E F +L
Sbjct: 331 TMLFSATQTRKVEDLAKISLKKEPLYVGVDDDKDTATVDGLEQGYVVCPSEKRFLLLFTF 390
Query: 622 LKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEFRASK 681
LK++ K++VF S+ M Y LL + + V ++ ++ Q R +F +
Sbjct: 391 LKKN----RKKKLMVFFSSCMSVKYHYELLNYIDLPVMAIHGKQKQNKRTTTFFQFCNAD 446
Query: 682 RLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEG--VLLLAPWE 739
IL+ +DV+ARG+D P+V +VQ P D ++YIHR+GRT R G G G +L+L P E
Sbjct: 447 SGILLCTDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTAR-GINGRGHALLILRPEE 505
Query: 740 EYFLDDLKD--LPLDKLQLPHLN-PEIQLQMDNHMAK--IDNNVKEAAYHAWLGYYN--S 792
FL LK +PL + + +IQ Q++ + K + + AY +++ Y+ S
Sbjct: 506 LGFLRYLKQAKVPLSEFEFSWSKISDIQAQLEKLIEKNYFLHKSAQEAYKSYVRAYDSHS 565
Query: 793 IREIGRDKTTLVELANKFAQSIGLQRPP 820
+++I + + L A S G + PP
Sbjct: 566 LKQIYNVNSLNLPLV---ALSFGFKVPP 590
>gi|321252297|ref|XP_003192357.1| ATP-dependent RNA helicase of the DEAD-box family involved in
ribosomal biogenesis ; Dbp3p [Cryptococcus gattii WM276]
gi|317458825|gb|ADV20570.1| ATP-dependent RNA helicase of the DEAD-box family involved in
ribosomal biogenesis, putative ; Dbp3p [Cryptococcus
gattii WM276]
Length = 639
Score = 212 bits (540), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 155/455 (34%), Positives = 238/455 (52%), Gaps = 31/455 (6%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F +SP T A+ G+ MT VQ T+ L GKD + A+TG+GK++AFL+P++E
Sbjct: 163 FSTLNLSPPTTAAIERMGFETMTEVQARTIPPLLAGKDVLGAARTGSGKTMAFLVPSVEL 222
Query: 441 VLKATSSSTTQLVP--PIYVLILCPTRELASQIAAEAIALLKNHD-GIGVLTLVGGTRFK 497
+ ST + P V+I+ PTRELA QI A L+++H GVL +GG K
Sbjct: 223 L------STLRFKPVNGTGVIIISPTRELALQIFGVAKELMQDHSQTFGVL--MGGANRK 274
Query: 498 VDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVEN 557
+ +L ++VATPGRLLDH++N G + LK LV+DEAD +L++GF ++++
Sbjct: 275 AEADKLVKG-VNLIVATPGRLLDHLQNTKGFVFK--NLKALVIDEADRILEIGFEEEMKQ 331
Query: 558 IVDCLP-RRRQSLLFSATMPKELV------LKREHTYIDTVGLGSVETPVKIKQSCLVAP 610
I+ LP RQS+LFSAT ++ L+ YI+ T ++Q +V
Sbjct: 332 IIKLLPSENRQSMLFSATQTTKVTDLARISLRPGPLYINVDETKEASTADMLEQGYVVCE 391
Query: 611 HELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYR 670
+ F +L LK+++ KVIVF S+ LL + + V +++ ++ Q R
Sbjct: 392 SDQRFMLLFTFLKKNL----KKKVIVFFSSCNSVKYHAELLNYIDVPVLDLHGKQKQQKR 447
Query: 671 DRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGE 730
EF + IL+ +DV+ARG+D P V ++Q P D YIHR+GRT R GK G+
Sbjct: 448 TNTFFEFINAPAGILLCTDVAARGLDIPKVDWIIQFDPPDDPRDYIHRVGRTARAGKSGK 507
Query: 731 GVLLLAPWEEYFLDDLK--DLPLDKLQLPHLN-PEIQLQMDNHMAK--IDNNVKEAAYHA 785
+L L P E FL LK +PL++ Q P ++Q Q+++ ++K N Y +
Sbjct: 508 SLLFLLPSELGFLRFLKVAKVPLNEYQFPQKKVADVQKQLESLISKNHYLNTSARDGYRS 567
Query: 786 WLGYYNSIREIGRDKTTLVELANKFAQSIGLQRPP 820
+L Y S ++LA K ++ G PP
Sbjct: 568 YLQAYASYSLKKIFDVNKLDLA-KVGKAFGFSVPP 601
>gi|241954424|ref|XP_002419933.1| ATP-dependent RNA helicase, putative; atp-dependent rna helicase
dbp4 (ec 3.6.1.-) (dead box protein 4 (helicase ca4)
(helicase uf1) [Candida dubliniensis CD36]
gi|223643274|emb|CAX42148.1| ATP-dependent RNA helicase, putative [Candida dubliniensis CD36]
Length = 765
Score = 212 bits (540), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 146/468 (31%), Positives = 251/468 (53%), Gaps = 36/468 (7%)
Query: 370 REEEPILSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGK 429
+ +E +SQ F + I+ T+K L A ++ +T +Q+ T+ L+G+D + A+TG+GK
Sbjct: 41 KTDEASISQ--FSDLPITENTLKGLKEATFVSLTDIQKKTIPVALKGEDLMGTARTGSGK 98
Query: 430 SIAFLLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLT 489
++AFL+P IE++++ + L LI+ PTRELA QI E + + ++
Sbjct: 99 TLAFLIPVIESLIRNKITEYDGLA----ALIVSPTRELAVQIF-EVLTKIGKYNSFSAGL 153
Query: 490 LVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDL 549
+ GG + ++ R+ ILV TPGR+ H+ G+ L++LVLDEAD LD+
Sbjct: 154 VTGGKDVQFEKERVSR--MNILVGTPGRISQHLNEAVGMETS--NLQVLVLDEADRCLDM 209
Query: 550 GFRKDVENIVDCLPRRRQSLLFSATMPKEL--VLKREHTYIDTVGLGSVE----TPVKIK 603
GF+K ++NI+ LP RQ+LLFSAT + + + + T + +G+ S + TP ++
Sbjct: 210 GFKKQIDNILGHLPTTRQTLLFSATQSESVNDLARLSLTNPNKIGVSSDQEVSATPESLE 269
Query: 604 QSCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK--MNVREM 661
Q + P + +L +K H+ K++VF S+ Y R ++ +++ ++
Sbjct: 270 QYYVKVPLDEKLDVLWSFIKSHLKS----KILVFFSSSKQVQYTYETFRTLQPGISLMKL 325
Query: 662 YSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGR 721
Y R Q R + +F ++ L +D+ ARG+D+P + VVQV P D Y+HR+GR
Sbjct: 326 YGRHKQTSRLETTMKFSQAQHACLFATDIVARGLDFPAIDWVVQVDCPEDAATYVHRVGR 385
Query: 722 TGREGKEGEGVLLLAPWEEYFLDDLKDLPLDKLQLPHLN------PEIQLQMDNHMAKID 775
+ R G++G+ +L+L P EE + LK L + K++ +N I+ Q+ + K D
Sbjct: 386 SARFGRKGKSLLMLLPSEEEGM--LKRLKIHKIEPKLMNIKQKSKKSIRPQLQSLCFK-D 442
Query: 776 NNVKEAAYHAWLGYYNSIREIGRDKTT--LVEL-ANKFAQSIGLQRPP 820
+K A++ Y+ S+ I +DK + EL A +A S+GL P
Sbjct: 443 PVMKNLGQRAFIAYFKSVH-IQKDKDVFKVEELPAESYAASLGLPGAP 489
>gi|268679387|ref|YP_003303818.1| DEAD/DEAH box helicase [Sulfurospirillum deleyianum DSM 6946]
gi|268617418|gb|ACZ11783.1| DEAD/DEAH box helicase domain protein [Sulfurospirillum deleyianum
DSM 6946]
Length = 463
Score = 212 bits (540), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 142/363 (39%), Positives = 200/363 (55%), Gaps = 24/363 (6%)
Query: 391 IKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTT 450
++ LT GY MT +QEA+L LEG+D V KAKTG+GK++AF LP + A+
Sbjct: 18 LETLTRLGYHNMTPIQEASLPFILEGRDIVAKAKTGSGKTLAFGLPLLLAL------HVK 71
Query: 451 QLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQI 510
Q+ I ++LCPTRELA Q++AE L I ++TL GG RF LE I
Sbjct: 72 QM--RIQSVVLCPTRELAEQVSAELRKLASFTHNIKIVTLCGGARFVPQCISLEHGA-HI 128
Query: 511 LVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQSLL 570
+V TPGR+L H++ K+ + +K LVLDEAD +LD+GF +D+E I+ +P+ RQ+LL
Sbjct: 129 VVGTPGRILQHLQEKT---INFEHIKTLVLDEADRMLDMGFYEDIEKIIAKMPKERQTLL 185
Query: 571 FSATMPKELVLKREHTYIDTVGLGSVE-----TPVKIKQSCL-VAPHELHFQILHHLLKE 624
FSAT P+E+ + + + + SVE P+ I Q L V E + LL E
Sbjct: 186 FSATFPREIEQMCQEVQKEALQI-SVEEEQKSAPLSISQIALKVEEREKEATLEAFLLNE 244
Query: 625 HILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEFRASKRLI 684
P VI+FC T + S L L E + ++ Q+ RD F I
Sbjct: 245 ----MPK-SVIIFCKTKVAVSALQSSLYEAGFDALCLHGDLEQIARDENLLLFANGSAQI 299
Query: 685 LVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLAPWEEYFLD 744
LV +D++ARG+D DV V+ +P E Y HR+GRTGR GKEG+ + + P EE FL
Sbjct: 300 LVATDLAARGLDIKDVEMVINYELPHTIEIYTHRIGRTGRMGKEGKAISFVTPSEESFLH 359
Query: 745 DLK 747
+L+
Sbjct: 360 ELE 362
>gi|294955800|ref|XP_002788686.1| ATP-dependent RNA helicase dbp-4, putative [Perkinsus marinus ATCC
50983]
gi|239904227|gb|EER20482.1| ATP-dependent RNA helicase dbp-4, putative [Perkinsus marinus ATCC
50983]
Length = 833
Score = 212 bits (540), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 148/462 (32%), Positives = 242/462 (52%), Gaps = 29/462 (6%)
Query: 374 PILSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAF 433
P+L+ F E +S T L G+ ++T +Q + + L G+D + +A+TG+GKS+AF
Sbjct: 115 PVLTGHAFGELPLSRKTQLGLKDHGFTKLTPIQRSAIPYALAGRDVLGEARTGSGKSLAF 174
Query: 434 LLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGG 493
++P IE + + S+ + +++ PTREL++QI + + +H +VGG
Sbjct: 175 IIPVIEKLYRMKWSAD----DGVGAVLISPTRELSAQIFT-VLQQVGSHHDFSAGCVVGG 229
Query: 494 TRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRK 553
+F+ +Q+ S I+V TPGRLL HIE +G L +++LVLDEAD +LDLGF++
Sbjct: 230 RKFQEEQKVFPS--LSIVVCTPGRLLQHIEETAGSD--LSNVQVLVLDEADRILDLGFKR 285
Query: 554 DVENIVDCLPRRRQSLLFSATMPKELVLKREHTYIDTVGLGSVE------TPVKIKQSCL 607
+E I+D LP +RQ+LLFSATM + V + +D L SV TP ++Q C+
Sbjct: 286 TIELILDALPPKRQTLLFSATM-RTSVQQLATLALDNPELLSVSRNLNSATPTGLRQLCM 344
Query: 608 VAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK--MNVREMYSRK 665
E L LK H K+IVF S LY R ++ + V E++
Sbjct: 345 TVKLEEKVNSLFSFLKTH----AQTKIIVFVSATKQVRFLYETFRRLRPGLAVLELHGGM 400
Query: 666 PQLYRDRISEEFRA-SKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGR 724
R ++ ++F + K L L+ +DV+ARG+D+P V V+Q+ P + YIHR+GRT R
Sbjct: 401 SLDKRMKVFDQFASKDKGLCLICTDVAARGVDFPQVDWVIQMDAPDTADTYIHRVGRTAR 460
Query: 725 EGKEGEGVLLLAPWE-EYFLDDLKDLPLDKLQLPHLNPEIQLQMDNHMAKI---DNNVKE 780
+ G ++ E E L +L +D +++ +N + + + + +VK
Sbjct: 461 FDRNGNALMFATEVEQESLLPELTQKKVD-VRVTSINRRRMFNIAGKLQSLLASEPDVKH 519
Query: 781 AAYHAWLGYYNSIREIGRDKTTLVELANKFAQSIGLQRPPPL 822
A A Y ++ GR + T ++A +A S+GL PP+
Sbjct: 520 LAIKAVQVYARAVALTGRTRLTEDQVA-AYAHSLGLHEAPPI 560
>gi|427424031|ref|ZP_18914168.1| DEAD/DEAH box helicase [Acinetobacter baumannii WC-136]
gi|425699139|gb|EKU68758.1| DEAD/DEAH box helicase [Acinetobacter baumannii WC-136]
Length = 620
Score = 212 bits (540), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 129/379 (34%), Positives = 204/379 (53%), Gaps = 19/379 (5%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
K F E + +AL G+ T VQE ++ A LEGKD +V ++TG+GK+ AFLLP +
Sbjct: 3 KTFAEFSLHETLQQALEGLGFTTPTPVQEQSIPAALEGKDLLVSSQTGSGKTAAFLLPTL 62
Query: 439 EAVLKATS----SSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGT 494
+ + + V +L+LCPTRELA Q++ +AIA +++ G+ + ++GG
Sbjct: 63 HNLAGQETFVPFKERMKAVTQPNILVLCPTRELAQQVSQDAIAFVRHMKGVRIAAIMGGM 122
Query: 495 RFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKD 554
F ++L+ Q++VATPGRLLD + + ++L ++ L++DEAD +LDLGF +D
Sbjct: 123 PFGKQIQQLKG--AQVIVATPGRLLDLVNRRQ---LKLDKVEALIVDEADRMLDLGFSED 177
Query: 555 VENIVDCLPRRRQSLLFSATMPKELVLKREHTYIDTVGLGSVETPVKIKQSCLVAPH--- 611
+E I D RRQ+L+FSAT ++ E + + ++ET H
Sbjct: 178 LEAISDLAGNRRQTLMFSATFADRIIRLAERMMNEPERI-AIETGHSTNTDITQTLHWTD 236
Query: 612 --ELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLY 669
E ++L H L + L + +VF ST T +L L E +V ++ PQ
Sbjct: 237 GFEHKKKLLTHWLADETLD----QAVVFASTQEDTDMLAEELAEAGHSVVALHGAMPQTV 292
Query: 670 RDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEG 729
R+R R + ILV +DV+ARG+D P ++ V+ G+P E Y+HR+GRTGR G+ G
Sbjct: 293 RNRRLRSIREGRAKILVATDVAARGLDVPTISHVINFGLPMKHEDYVHRIGRTGRAGRTG 352
Query: 730 EGVLLLAPWEEYFLDDLKD 748
+ + L E + L+D
Sbjct: 353 QAITLATYRERGKIRALED 371
>gi|331092062|ref|ZP_08340893.1| hypothetical protein HMPREF9477_01536 [Lachnospiraceae bacterium
2_1_46FAA]
gi|330402263|gb|EGG81834.1| hypothetical protein HMPREF9477_01536 [Lachnospiraceae bacterium
2_1_46FAA]
Length = 528
Score = 212 bits (540), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 138/405 (34%), Positives = 220/405 (54%), Gaps = 22/405 (5%)
Query: 380 RFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIE 439
+F++ GI P KA+ G+ + + +Q + LEGKD + +A+TGTGK+ AF +P ++
Sbjct: 5 KFEQLGICPEIQKAVKYMGFEEASPIQAKAIPVILEGKDIIGQAQTGTGKTAAFGIPLLQ 64
Query: 440 AVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVD 499
V + ++LCPTRELA Q+A E L K GI VL + GG V
Sbjct: 65 KVNPKNKK--------LQGIVLCPTRELAIQVADEIRNLAKYMHGIKVLPIYGGQEI-VK 115
Query: 500 QRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIV 559
Q R + QI++ TPGR++DH+ K+ +++ + +VLDEAD +L++GFR+D+E I+
Sbjct: 116 QIRSLKNGTQIIIGTPGRVMDHMRRKT---IKMEQVHTVVLDEADEMLNMGFREDIETIL 172
Query: 560 DCLPRRRQSLLFSATMPKEL--VLKREHTYIDTVGLGSVETPV-KIKQSCLVAPHELHFQ 616
+ +P RQ++LFSATMPK + + K+ + + + E V I+Q + +
Sbjct: 173 EGVPEERQTVLFSATMPKAIMEITKKFQKKAEVIKVTKKELTVPNIEQFYYEVKPKNKEE 232
Query: 617 ILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEE 676
+L LL + TP V VFC+T LL L ++ Q+ RDR+ +
Sbjct: 233 VLARLLDIY---TPKLSV-VFCNTKKQVDLLVTSLLGRGYFAAGLHGDMKQVQRDRVMQG 288
Query: 677 FRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLA 736
FR+ K ILV +DV+ARG+D +V +V +P D E Y+HR+GRTGR G+ G ++
Sbjct: 289 FRSGKTDILVATDVAARGIDVDEVEAVFNYDLPQDDEYYVHRIGRTGRAGRVGRSFSFVS 348
Query: 737 PWEEYFLDDLKDLPLDKL---QLPHLNPEIQLQMDNHMAKIDNNV 778
E Y L +++ K+ ++P LN +M+N + ID +
Sbjct: 349 GKEVYKLKEIQRYCKTKIYAQKVPSLNDVATTKMENILDDIDQII 393
>gi|195048518|ref|XP_001992542.1| GH24149 [Drosophila grimshawi]
gi|193893383|gb|EDV92249.1| GH24149 [Drosophila grimshawi]
Length = 798
Score = 212 bits (540), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 155/497 (31%), Positives = 260/497 (52%), Gaps = 44/497 (8%)
Query: 353 KEISKNKLNGNG----EKKEKREEEPILSQKRFDECGISPLTIKALTAAGYIQMTRVQEA 408
KEIS++KL E + K ++ + K F + +S T KAL + +I T VQ
Sbjct: 33 KEISRSKLAATDSEIQELRSKYDDIDASTIKTFAQFPLSQKTQKALAESKFITATEVQRQ 92
Query: 409 TLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELA 468
++ L+GKD + A TG+GK++AFL+P +E + S + + +I+ PTRELA
Sbjct: 93 SIGPALQGKDVLGAAITGSGKTLAFLIPVLEHLYMNKWSRSD----GVGAIIISPTRELA 148
Query: 469 SQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGL 528
QI + K+HD L ++GG K ++ R+ D C IL+ TPGRLL H++
Sbjct: 149 YQIFETLKKVGKHHDFSAGL-IIGGKNLKFERTRM--DQCNILICTPGRLLQHMDENPLF 205
Query: 529 SVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQSLLFSATMPKEL-----VLKR 583
+ M +MLVLDEAD LD+GF+K + I++ P RQ+LLFSAT L + +
Sbjct: 206 NTSTM--EMLVLDEADRCLDMGFQKTLNAIIENFPPDRQTLLFSATQTNTLEDLARLNLQ 263
Query: 584 EHTYIDTVGLGSVETPVK----------IKQSCLVAPHELHFQILHHLLKEHILGTPDYK 633
+ Y+ S TP ++QS +V P E +L +K H+ K
Sbjct: 264 QPVYVGYGTANSTTTPASNAAVLALPELLQQSYVVLPLEEKITMLWSFIKNHL----KQK 319
Query: 634 VIVFCSTGMVTSLLYLLLREMK--MNVREMYSRKPQLYRDRISEEFRASKRLILVTSDVS 691
+IVF ++ LY + +++ + + +Y Q R I EEF ++++ +DV+
Sbjct: 320 IIVFVASCKQAKYLYEIFCKLRPGVGLLALYGTLHQDKRIAIYEEFLRKSQVVMFATDVA 379
Query: 692 ARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLAP-WEEYFLDDLKDLP 750
+RG+D+P V V+Q+ P D QYIHR GR+ R GE +L++ P EE+ + L++
Sbjct: 380 SRGLDFPAVNWVLQLDCPEDVSQYIHRAGRSARNKSHGECLLVMTPNEEEHMIGALREQL 439
Query: 751 LDKLQLPHLNPEI----QLQMDNHMAKIDNNVKEAAYHAWLGYYNSIREIGRDKTTLVEL 806
+++ H++P+ +++++ +A+ ++ +A A+L Y S+ + R+K L
Sbjct: 440 NVEIKSVHIDPKKLFSPRVKIEAFLAQFP-ELRASAQRAFLAYLKSVF-LMRNKRLFNVL 497
Query: 807 A---NKFAQSIGLQRPP 820
+ + +AQS+GL P
Sbjct: 498 SLDLDAYAQSLGLAVTP 514
>gi|366986649|ref|XP_003673091.1| hypothetical protein NCAS_0A01400 [Naumovozyma castellii CBS 4309]
gi|342298954|emb|CCC66698.1| hypothetical protein NCAS_0A01400 [Naumovozyma castellii CBS 4309]
Length = 762
Score = 212 bits (540), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 148/462 (32%), Positives = 243/462 (52%), Gaps = 35/462 (7%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F + IS T+K L+ A ++++T +Q ++ L+G D + AKTG+GK++AFL+P +E
Sbjct: 43 FKDLPISNATLKGLSEAAFLKLTDIQRESIPVSLKGYDVLGSAKTGSGKTLAFLIPVLEK 102
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+ + + L LI+ PTRELA QI E + + +H ++GG K +
Sbjct: 103 LYRERWTEFDGL----GALIISPTRELAMQIY-EVLIKIGSHTSFSAGLVIGGKDVKFEL 157
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
R+ IL+ TPGR+L H++ GL+ L+MLVLDEAD LD+GF+K ++ IV
Sbjct: 158 ERISR--INILIGTPGRILQHLDQAVGLNTS--NLQMLVLDEADRCLDMGFKKTLDAIVG 213
Query: 561 CLPRRRQSLLFSATMPKELVLKREHTYIDTVGLGSVE-----------TPVKIKQSCLVA 609
LP RQ+LLFSAT + L + D +G+++ TP ++QS +
Sbjct: 214 NLPPSRQTLLFSATQSQSLADLARLSLTDYKSVGTMDKANEKSDAEAATPATLEQSYIEV 273
Query: 610 PHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK--MNVREMYSRKPQ 667
+L +K H+ K+IVF S+ +Y R+++ +++ ++ R+ Q
Sbjct: 274 ELADKLDVLFSFIKTHLKA----KMIVFLSSSKQVHFVYETFRKLQPGISLMHLHGRQKQ 329
Query: 668 LYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGK 727
R ++F ++++ L +DV ARG+D+P V V+Q+ P D + YIHR+GR+ R GK
Sbjct: 330 KARTETLDKFSRAQQVCLFATDVVARGIDFPSVDWVIQLDCPEDADTYIHRVGRSARYGK 389
Query: 728 EGEGVLLLAPWE-EYFLDDL---KDLPLDKLQLPHLNPEIQLQMDNHMAKIDNNVKEAAY 783
+G+ +++L P E + FL L K LP I+ Q+ + + K D +K
Sbjct: 390 KGKSLIMLTPTEKDAFLKRLSARKILPNQLTIKQSKKKSIKPQLQSLLFK-DPELKYLGQ 448
Query: 784 HAWLGYYNSIREIGRDKTTLV--EL-ANKFAQSIGLQRPPPL 822
A++ Y SI + +DK EL +FA S+GL P +
Sbjct: 449 KAFISYIRSIY-VQKDKDVFKFDELPTEEFATSLGLPGAPKI 489
>gi|395519421|ref|XP_003763848.1| PREDICTED: ATP-dependent RNA helicase DDX18 isoform 2 [Sarcophilus
harrisii]
Length = 665
Score = 212 bits (540), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 152/451 (33%), Positives = 246/451 (54%), Gaps = 41/451 (9%)
Query: 390 TIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSST 449
T+KA+T G+ MT +Q ++ LEG+D + AKTG+GK++AFL+P+IE ++K
Sbjct: 184 TLKAITEMGFTNMTAIQHKSIRPLLEGRDILAAAKTGSGKTLAFLIPSIELIVK------ 237
Query: 450 TQLVP--PIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDP 507
+ +P VLIL PTRELA Q L+ H L ++GG+ + ++L ++
Sbjct: 238 LKFMPRNGTGVLILSPTRELAMQTFGVLKELMSYHVHTYGL-IMGGSNRSAEAQKL-ANG 295
Query: 508 CQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQ 567
I+VATPGRLLDH++N G + L+ LV+DEAD +L++GF ++++ I+ LP+RRQ
Sbjct: 296 INIIVATPGRLLDHMQNTPGFMFK--NLQCLVIDEADRILEVGFEEEMKQIIKLLPKRRQ 353
Query: 568 SLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILHHL 621
++LFSAT ++ + LK+E Y+ T ++Q +V P E F +L
Sbjct: 354 TMLFSATQTRKVEDLAKISLKKEPLYVGVDDDKDTATVDGLEQGYVVCPSEKRFLLLFTF 413
Query: 622 LKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEFRASK 681
LK++ K++VF S+ M Y LL + + V ++ ++ Q R +F +
Sbjct: 414 LKKN----RKKKLMVFFSSCMSVKYHYELLNYIDLPVMAIHGKQKQNKRTTTFFQFCNAD 469
Query: 682 RLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEG--VLLLAPWE 739
IL+ +DV+ARG+D P+V +VQ P D ++YIHR+GRT R G G G +L+L P E
Sbjct: 470 SGILLCTDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTAR-GINGRGHALLILRPEE 528
Query: 740 EYFLDDLKD--LPLDKLQLPHLN-PEIQLQMDNHMAKIDNNVKEAAYHAWLGYYNSIREI 796
FL LK +PL + + +IQ Q++ + K + + ++A A+ Y +
Sbjct: 529 LGFLRYLKQAKVPLSEFEFSWSKISDIQSQLEKLIEK-NYFLHKSAQEAYKSYVRAY--- 584
Query: 797 GRDKTTLVELAN-------KFAQSIGLQRPP 820
D +L ++ N + A S G + PP
Sbjct: 585 --DSHSLKQIYNVNSLNLPQVALSFGFKVPP 613
>gi|375136185|ref|YP_004996835.1| ATP-dependent RNA helicase [Acinetobacter calcoaceticus PHEA-2]
gi|325123630|gb|ADY83153.1| ATP-dependent RNA helicase [Acinetobacter calcoaceticus PHEA-2]
Length = 620
Score = 212 bits (540), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 129/379 (34%), Positives = 204/379 (53%), Gaps = 19/379 (5%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
K F E + +AL G+ T VQE ++ A LEGKD +V ++TG+GK+ AFLLP +
Sbjct: 3 KTFAEFSLHETLQQALEGLGFTTPTPVQEQSIPAALEGKDLLVSSQTGSGKTAAFLLPTL 62
Query: 439 EAVLKATS----SSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGT 494
+ + + V +L+LCPTRELA Q++ +AIA +++ G+ + ++GG
Sbjct: 63 HNLAGQETFVPFKERMKAVTQPNILVLCPTRELAQQVSQDAIAFVRHMKGVRIAAIMGGM 122
Query: 495 RFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKD 554
F ++L+ Q++VATPGRLLD + + ++L ++ L++DEAD +LDLGF +D
Sbjct: 123 PFGKQIQQLKG--AQVIVATPGRLLDLVNRRQ---LKLDKVEALIVDEADRMLDLGFSED 177
Query: 555 VENIVDCLPRRRQSLLFSATMPKELVLKREHTYIDTVGLGSVETPVKIKQSCLVAPH--- 611
+E I D RRQ+L+FSAT ++ E + + ++ET H
Sbjct: 178 LEAISDLAGNRRQTLMFSATFADRIIRLAERMMNEPERI-AIETGHSTNTDITQTLHWTD 236
Query: 612 --ELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLY 669
E ++L H L + L + +VF ST T +L L E +V ++ PQ
Sbjct: 237 GFEHKKKLLTHWLADETLD----QAVVFASTQEDTDMLAEELAEAGHSVVALHGAMPQTV 292
Query: 670 RDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEG 729
R+R R + ILV +DV+ARG+D P ++ V+ G+P E Y+HR+GRTGR G+ G
Sbjct: 293 RNRRLRSIREGRAKILVATDVAARGLDVPTISHVINFGLPMKHEDYVHRIGRTGRAGRTG 352
Query: 730 EGVLLLAPWEEYFLDDLKD 748
+ + L E + L+D
Sbjct: 353 QAITLATYRERGKIRALED 371
>gi|356513888|ref|XP_003525640.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 27-like [Glycine
max]
Length = 572
Score = 212 bits (540), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 145/435 (33%), Positives = 237/435 (54%), Gaps = 34/435 (7%)
Query: 375 ILSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFL 434
I+S + F+ G+S T KA+ G+ MT++Q + L GKD + A+TG+GK++AFL
Sbjct: 83 IMSTESFESLGLSEPTYKAIMDMGFHHMTQIQARAIPPLLIGKDVLGAARTGSGKTLAFL 142
Query: 435 LPAIEAV--LKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHD-GIGVLTLV 491
+PA+E + +K T + V+++CPTRELA Q A A LLK H +G+ ++
Sbjct: 143 IPALELLYNVKFTPRNGAG------VIVICPTRELAIQTHAVAKELLKYHSQTLGL--VI 194
Query: 492 GGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGF 551
GG+ K++ RL + +LV TPGRLLDH++N G + LK L++DEAD +L+ F
Sbjct: 195 GGSARKIEAERL-AKGINLLVGTPGRLLDHLQNTKGFMYK--NLKCLMIDEADRILEANF 251
Query: 552 RKDVENIVDCLPRRRQSLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQS 605
++++ I+ LP+ RQ+ LFSAT K+ L + YID + T + Q
Sbjct: 252 EEEMKQIIKILPKNRQTALFSATQTKKVEDLARLSFQTTPIYIDVDDGRTKVTNEGLLQG 311
Query: 606 CLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRK 665
+V P F +L+ LK H KV+VF S+ +L +++N ++ ++
Sbjct: 312 YVVVPCAKRFIVLYSFLKRH----QSKKVMVFFSSCNSVKFHADILNLIQLNCSSIHGKQ 367
Query: 666 PQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGR- 724
Q R +F +++ IL+ +DV+ARG+D P V +VQ P + ++YIHR+GRT R
Sbjct: 368 KQQTRTTTFFDFCKAEKGILLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARG 427
Query: 725 EGKEGEGVLLLAPWEEYFLDDL-------KDLPLDKLQLPHLNPEIQLQMDNHMAKIDNN 777
EG +G +L L P E FL L K+ D+ ++ ++ ++ + N+ N
Sbjct: 428 EGGKGNALLFLIPEELQFLCYLKAAKVPVKEYAYDEKKVANVQSHLENLVVNNFYL--NK 485
Query: 778 VKEAAYHAWLGYYNS 792
+ + AY +++ YNS
Sbjct: 486 MAKEAYRSYILAYNS 500
>gi|322700332|gb|EFY92088.1| ATP-dependent RNA helicase DBP4 [Metarhizium acridum CQMa 102]
Length = 796
Score = 212 bits (540), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 129/369 (34%), Positives = 200/369 (54%), Gaps = 20/369 (5%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
K F + +S TI L A+ + +T VQ+ + L+G D + AKTG+GK++AFL+P +
Sbjct: 50 KTFSDLPLSQPTITGLKASHFQTLTEVQQQAIPLALKGNDVLGAAKTGSGKTLAFLIPVL 109
Query: 439 EAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
E + +A + L LI+ PTRELA QI E + + + ++GG K
Sbjct: 110 EKLYRAQWTEFDGL----GALIISPTRELAVQIF-EVLRKIGRYHVFSAGLVIGGKNLKE 164
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
+ RL ILV TPGR+L H++ +GL L++LVLDEAD ++D+GF+ V+ +
Sbjct: 165 EAERLAR--MNILVCTPGRMLQHLDQTAGLDAN--NLQILVLDEADRIMDMGFQSAVDAL 220
Query: 559 VDCLPRRRQSLLFSATMPKEL-----VLKREHTYIDTVGLGSVETPVKIKQSCLVAPHEL 613
V+ LP+ RQ+L+FSAT K++ + +E Y+ + TP ++Q + P
Sbjct: 221 VEHLPKSRQTLMFSATQSKKVSDLARLSLKEPEYVSVHEAATSATPTNLQQHYITTPLPE 280
Query: 614 HFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK--MNVREMYSRKPQLYRD 671
L+ LK ++ K+IVF S+G +Y R ++ + + ++ R+ Q+ R
Sbjct: 281 KLDTLYGFLKSNL----KSKIIVFLSSGKQVRFVYESFRHLQPGIPLLHLHGRQRQVARL 336
Query: 672 RISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEG 731
I+ F A+K L +DV ARG+D+P V V+QV P D + YIHR+GRT R G
Sbjct: 337 EITSRFTAAKHSCLFATDVVARGIDFPAVDWVIQVDCPEDVDTYIHRVGRTARYQSNGRA 396
Query: 732 VLLLAPWEE 740
VL L P EE
Sbjct: 397 VLFLDPSEE 405
>gi|195330913|ref|XP_002032147.1| GM26397 [Drosophila sechellia]
gi|194121090|gb|EDW43133.1| GM26397 [Drosophila sechellia]
Length = 680
Score = 212 bits (540), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 148/453 (32%), Positives = 247/453 (54%), Gaps = 35/453 (7%)
Query: 385 GISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKA 444
+S T++A+ G+ +MT +Q +L+ L+G+D V A+TG+GK++AFL+PA+E + K
Sbjct: 193 AVSEATLRAIKEMGFTEMTEIQAKSLTPLLKGRDLVGAAQTGSGKTLAFLIPAVELINK- 251
Query: 445 TSSSTTQLVP--PIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRR 502
+ +P V+I+ PTREL+ Q L+ +H L + GG+ +V+ +
Sbjct: 252 -----LRFMPRNGTGVIIISPTRELSMQTFGVLKELMAHHHHTYGLVM-GGSNRQVESEK 305
Query: 503 LESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCL 562
L ILVATPGRLLDH++N + L+ L++DE D +L++GF ++++ I++ L
Sbjct: 306 L-GKGINILVATPGRLLDHLQNSPDFLYK--NLQCLIIDEVDRILEIGFEEELKQIINLL 362
Query: 563 PRRRQSLLFSATMP------KELVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQ 616
P+RRQ++LFSAT +L LK E Y+ T ++Q +V P E
Sbjct: 363 PKRRQTMLFSATQTARIEALSKLALKSEPIYVGVHDNQDTATVDGLEQGYIVCPSEKRLL 422
Query: 617 ILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEE 676
+L LK++ KV+VF S+ M + L + + V ++ ++ Q R +
Sbjct: 423 VLFTFLKKN----RKKKVMVFFSSCMSVKYHHELFNYIDLPVTSIHGKQKQTKRTTTFFQ 478
Query: 677 FRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGR-EGKEGEGVLLL 735
F ++ IL+ +DV+ARG+D P V +VQ P D +YIHR+GRT R G G +LL+
Sbjct: 479 FCNAESGILLCTDVAARGLDIPQVDWIVQYDPPDDPREYIHRVGRTARGSGTSGHALLLM 538
Query: 736 APWEEYFLDDLK--DLPLDKLQLPHLN-PEIQLQMDNHMAK---IDNNVKEAAYHAWLGY 789
P E FL LK +PL++ + +IQLQ++ +AK ++ + KE A+ +++
Sbjct: 539 RPEELGFLRYLKAAKVPLNEFEFSWQKIADIQLQLEKLIAKNYFLNQSAKE-AFKSYVRA 597
Query: 790 YNS--IREIGRDKTTLVELANKFAQSIGLQRPP 820
Y+S +++I T ++ A+S G PP
Sbjct: 598 YDSHQLKQIFNVNTLDLQAV---AKSFGFLVPP 627
>gi|395519419|ref|XP_003763847.1| PREDICTED: ATP-dependent RNA helicase DDX18 isoform 1 [Sarcophilus
harrisii]
Length = 640
Score = 212 bits (540), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 152/451 (33%), Positives = 246/451 (54%), Gaps = 41/451 (9%)
Query: 390 TIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSST 449
T+KA+T G+ MT +Q ++ LEG+D + AKTG+GK++AFL+P+IE ++K
Sbjct: 159 TLKAITEMGFTNMTAIQHKSIRPLLEGRDILAAAKTGSGKTLAFLIPSIELIVK------ 212
Query: 450 TQLVP--PIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDP 507
+ +P VLIL PTRELA Q L+ H L ++GG+ + ++L ++
Sbjct: 213 LKFMPRNGTGVLILSPTRELAMQTFGVLKELMSYHVHTYGL-IMGGSNRSAEAQKL-ANG 270
Query: 508 CQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQ 567
I+VATPGRLLDH++N G + L+ LV+DEAD +L++GF ++++ I+ LP+RRQ
Sbjct: 271 INIIVATPGRLLDHMQNTPGFMFK--NLQCLVIDEADRILEVGFEEEMKQIIKLLPKRRQ 328
Query: 568 SLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILHHL 621
++LFSAT ++ + LK+E Y+ T ++Q +V P E F +L
Sbjct: 329 TMLFSATQTRKVEDLAKISLKKEPLYVGVDDDKDTATVDGLEQGYVVCPSEKRFLLLFTF 388
Query: 622 LKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEFRASK 681
LK++ K++VF S+ M Y LL + + V ++ ++ Q R +F +
Sbjct: 389 LKKN----RKKKLMVFFSSCMSVKYHYELLNYIDLPVMAIHGKQKQNKRTTTFFQFCNAD 444
Query: 682 RLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEG--VLLLAPWE 739
IL+ +DV+ARG+D P+V +VQ P D ++YIHR+GRT R G G G +L+L P E
Sbjct: 445 SGILLCTDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTAR-GINGRGHALLILRPEE 503
Query: 740 EYFLDDLKD--LPLDKLQLPHLN-PEIQLQMDNHMAKIDNNVKEAAYHAWLGYYNSIREI 796
FL LK +PL + + +IQ Q++ + K + + ++A A+ Y +
Sbjct: 504 LGFLRYLKQAKVPLSEFEFSWSKISDIQSQLEKLIEK-NYFLHKSAQEAYKSYVRAY--- 559
Query: 797 GRDKTTLVELAN-------KFAQSIGLQRPP 820
D +L ++ N + A S G + PP
Sbjct: 560 --DSHSLKQIYNVNSLNLPQVALSFGFKVPP 588
>gi|359322003|ref|XP_533327.3| PREDICTED: ATP-dependent RNA helicase DDX18 [Canis lupus
familiaris]
Length = 669
Score = 212 bits (540), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 168/515 (32%), Positives = 268/515 (52%), Gaps = 60/515 (11%)
Query: 339 EDEHDFEEQVELIRKEISKNKLNGNGEKKEKREEE------PILSQKRFDECGISPL--- 389
ED+ D EE + + + NGEK + EE+ P+ F++ + L
Sbjct: 131 EDKGDSEEGTQ------APEETENNGEKPDDEEEDSEVPSLPLGLTGAFEDTSFASLSSL 184
Query: 390 ----TIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKAT 445
T+KA+ G+ MT +Q ++ LEG+D + AKTG+GK++AFL+PA+E ++K
Sbjct: 185 VNENTLKAIKEMGFTNMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPAVELIVK-- 242
Query: 446 SSSTTQLVP--PIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRL 503
+ +P VLIL PTRELA Q L+ H L ++GG+ + ++L
Sbjct: 243 ----LKFMPRNGTGVLILSPTRELAMQTFGVLKELMMYHVHTYGL-IMGGSNRSAEAQKL 297
Query: 504 ESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLP 563
+ I+VATPGRLLDH++N G + L+ LV+DEAD +LD+GF ++++ I+ LP
Sbjct: 298 -GNGINIIVATPGRLLDHMQNTPGFMYK--NLQCLVIDEADRILDVGFEEELKQIIKLLP 354
Query: 564 RRRQSLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQI 617
RRQ++LFSAT ++ + LK+E Y+ + T ++Q +V P E F +
Sbjct: 355 TRRQTMLFSATQTRKVEDLARISLKKEPLYVGVDDDKANATVDGLEQGYVVCPSEKRFLL 414
Query: 618 LHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEF 677
L LK++ K++VF S+ Y LL + + V ++ R+ Q R +F
Sbjct: 415 LFTFLKKN----RKKKLMVFFSSCKSVKYHYELLNYIDLPVLAIHGRQKQNKRTTTFFQF 470
Query: 678 RASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEG--VLLL 735
+ IL+ +DV+ARG+D P+V +VQ P D ++YIHR+GRT R G G G +L+L
Sbjct: 471 CNADSGILLCTDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTAR-GLNGRGHALLIL 529
Query: 736 APWEEYFLDDLKD--LPLDKLQLPHLN-PEIQLQMDNHMAKIDNNVKEAAYHAWLGYYNS 792
P E FL LK +PL + + +IQ Q++ + K + + ++A A+ Y
Sbjct: 530 HPEELGFLRYLKQSKVPLSEFEFSWSKISDIQSQLEKLIEK-NYFLHKSAQEAYKSY--- 585
Query: 793 IREIGRDKTTLVELAN-------KFAQSIGLQRPP 820
IR D +L ++ N + A S G + PP
Sbjct: 586 IR--AYDSHSLKQIFNVNNLNLPQVALSFGFKVPP 618
>gi|223984537|ref|ZP_03634669.1| hypothetical protein HOLDEFILI_01964 [Holdemania filiformis DSM
12042]
gi|223963523|gb|EEF67903.1| hypothetical protein HOLDEFILI_01964 [Holdemania filiformis DSM
12042]
Length = 556
Score = 212 bits (540), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 135/395 (34%), Positives = 214/395 (54%), Gaps = 21/395 (5%)
Query: 380 RFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIE 439
+F+E +SP +A+ GY + T +Q A + + G D + +++TGTGK+ AF +P IE
Sbjct: 2 KFNELNLSPEMSRAIADCGYTEATYIQSACIPVVMNGGDVIGQSQTGTGKTAAFAIPIIE 61
Query: 440 AVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVD 499
+L+ T Q LIL PTRELA Q+ E K +GI + + GG +
Sbjct: 62 -MLEVTDRKRPQ------ALILSPTRELAMQVCDEIRKFTKYKEGIRTVAVYGGQQISKQ 114
Query: 500 QRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIV 559
L+ I+V TPGR+LDHI ++ +R ++LVLDEAD +L++GFR+D+E ++
Sbjct: 115 ILELKKG-ADIVVGTPGRVLDHIRRRT---LRFDQCRVLVLDEADEMLNMGFREDIETVI 170
Query: 560 DCLPRRRQSLLFSATMPKELVLKREHTYIDTVGLGSVETPV---KIKQSCLVAPHELHFQ 616
+ LP++RQ++LFSATMPK ++ + V + + +T + KI+Q V P E +
Sbjct: 171 EALPQQRQTVLFSATMPKPILEITSQYQTNPVHIKTPQTQINTPKIEQVYYVCPKEAKKE 230
Query: 617 ILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEE 676
IL L+ + P + ++FC+T + L L ++ Q R + +
Sbjct: 231 ILMQLIS---MQNP-HLAMIFCNTKKMVDELTSDLVSKGYPAAALHGDMKQEMRTGVMDN 286
Query: 677 FRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLA 736
F+ K ILV +DV+ARG+D + V +P + E Y+HR+GRTGR GKEG V L+
Sbjct: 287 FKKGKINILVATDVAARGIDVDSMDVVFNYDLPQESEYYVHRIGRTGRAGKEGLAVTLIT 346
Query: 737 PWEEYFLDDLKDLPLDKLQ---LPHLNPEIQLQMD 768
++Y L DL+ KL LP L ++++D
Sbjct: 347 ARQKYALRDLERTTRSKLTQKPLPSLEEVRKIRLD 381
>gi|91077478|ref|XP_968425.1| PREDICTED: similar to CG5800 CG5800-PA [Tribolium castaneum]
gi|270002829|gb|EEZ99276.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 10 [Tribolium castaneum]
Length = 770
Score = 212 bits (540), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 157/471 (33%), Positives = 250/471 (53%), Gaps = 36/471 (7%)
Query: 367 KEKREEEPILSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTG 426
+EK E + + FD+ +SP T+K L GY + T +Q T+ L GKD + A+TG
Sbjct: 39 QEKYEAIDVSTINSFDDLPLSPKTLKGLKECGYTKPTDIQRETIKLGLTGKDILGAAQTG 98
Query: 427 TGKSIAFLLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIG 486
+GK++AFL+P +E + T+L + L++ PTRELA QI E + ++H+
Sbjct: 99 SGKTLAFLIPILE---RLYCKQWTRL-DGLGALVITPTRELAYQIFEELRRVGEHHEFSA 154
Query: 487 VLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHL 546
L ++GG K ++ R+ D C I++ TPGR+L H++ + +++LVLDEAD
Sbjct: 155 GL-IIGGKDLKFERNRM--DQCNIVIGTPGRILQHMDENPLFDC--VNMEILVLDEADRC 209
Query: 547 LDLGFRKDVENIVDCLPRRRQSLLFSATMPKEL-----VLKREHTYIDTVGLGSVETPVK 601
LD+GF + + IV LP +RQ+LLFSAT K + + + Y+ TP
Sbjct: 210 LDMGFEQTMNAIVANLPAKRQTLLFSATQTKSVRDLARLSLKNPAYVSVHEHSEYSTPKG 269
Query: 602 IKQSCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREM 661
++QS +V + IL +K H+ K I+F ++ +Y + ++ V M
Sbjct: 270 LQQSYVVCELKDKVSILWSFIKNHL----KQKSIIFLASCKEVKYVYEIFCRLRPGVSLM 325
Query: 662 --YSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRL 719
Y QL R I E F +L +D++ARG+D+P+V VVQ P D YIHR+
Sbjct: 326 ALYGTLHQLRRMDIYENFCKKTSAVLFATDIAARGLDFPEVHWVVQADCPEDAATYIHRV 385
Query: 720 GRTGREGKEGEGVLLLAPWEEYFLDDLKD--LPLDKLQLPHLNPEIQLQMDNHMAKI--- 774
GRT R + GE +LLL P E LD+LK+ +P++K+ +NP L+++N + K+
Sbjct: 386 GRTARFFRGGESLLLLLPSELKMLDNLKEKKIPIEKID---INP---LKLNNPVRKMEAF 439
Query: 775 ---DNNVKEAAYHAWLGYYNSIREIGRDKTTLVEL--ANKFAQSIGLQRPP 820
D ++K+ A A++ Y S+ + K V+ + FA S+GL PP
Sbjct: 440 LARDPDLKDTAQRAFVSYAKSVFLMKDKKVFNVQALDTDSFAHSLGLAIPP 490
>gi|58263404|ref|XP_569112.1| hypothetical protein [Cryptococcus neoformans var. neoformans
JEC21]
gi|134108568|ref|XP_777235.1| hypothetical protein CNBB4650 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|338818214|sp|P0CQ85.1|HAS1_CRYNB RecName: Full=ATP-dependent RNA helicase HAS1
gi|338818215|sp|P0CQ84.1|HAS1_CRYNJ RecName: Full=ATP-dependent RNA helicase HAS1
gi|50259920|gb|EAL22588.1| hypothetical protein CNBB4650 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57223762|gb|AAW41805.1| conserved hypothetical protein [Cryptococcus neoformans var.
neoformans JEC21]
Length = 607
Score = 212 bits (540), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 155/455 (34%), Positives = 237/455 (52%), Gaps = 31/455 (6%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F +SP T A+ G+ MT VQ T+ L GKD + A+TG+GK++AFL+P++E
Sbjct: 131 FSTLNLSPPTTAAIERMGFETMTEVQARTIPPLLAGKDVLGAARTGSGKTMAFLIPSVEL 190
Query: 441 VLKATSSSTTQLVPP--IYVLILCPTRELASQIAAEAIALLKNHD-GIGVLTLVGGTRFK 497
+ ST + P V+I+ PTRELA QI A L++ H GVL +GG K
Sbjct: 191 L------STLRFKPVNGTGVIIISPTRELALQIFGVAKELMQGHSQTFGVL--MGGANRK 242
Query: 498 VDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVEN 557
+ +L ++VATPGRLLDH++N G + LK LV+DEAD +L++GF ++++
Sbjct: 243 AEADKLVKG-VNLIVATPGRLLDHLQNTKGFVFK--NLKALVIDEADRILEIGFEEEMKQ 299
Query: 558 IVDCLP-RRRQSLLFSATMPKELV------LKREHTYIDTVGLGSVETPVKIKQSCLVAP 610
I+ LP RQS+LFSAT ++ L+ YI+ T ++Q +V
Sbjct: 300 IIKLLPSENRQSMLFSATQTTKVTDLARISLRPGPLYINVDETKEASTADMLEQGYVVCE 359
Query: 611 HELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYR 670
+ F +L LK+++ KVIVF S+ LL + + V +++ ++ Q R
Sbjct: 360 SDQRFMLLFTFLKKNL----KKKVIVFFSSCNSVKYHAELLNYIDVPVLDLHGKQKQQKR 415
Query: 671 DRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGE 730
EF + IL+ +DV+ARG+D P V ++Q P D YIHR+GRT R GK G+
Sbjct: 416 TNTFFEFINAPAGILLCTDVAARGLDIPKVDWIIQFDPPDDPRDYIHRVGRTARAGKSGK 475
Query: 731 GVLLLAPWEEYFLDDLK--DLPLDKLQLPHLN-PEIQLQMDNHMAK--IDNNVKEAAYHA 785
+L L P E FL LK +PL++ Q P ++Q Q+++ ++K N Y +
Sbjct: 476 SLLFLLPSELGFLRFLKVAKVPLNEYQFPQKKVADVQKQLESLISKNHYLNTSARDGYRS 535
Query: 786 WLGYYNSIREIGRDKTTLVELANKFAQSIGLQRPP 820
+L Y S ++LA K ++ G PP
Sbjct: 536 YLQAYASYSLKKIFDVNKLDLA-KVGKAFGFAVPP 569
>gi|326923057|ref|XP_003207758.1| PREDICTED: ATP-dependent RNA helicase DDX18-like [Meleagris
gallopavo]
Length = 703
Score = 212 bits (540), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 152/455 (33%), Positives = 248/455 (54%), Gaps = 41/455 (9%)
Query: 386 ISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKAT 445
+S T+K ++ G+ MT +Q ++ LEG+D + AKTG+GK++AFL+PA+E + K
Sbjct: 219 VSENTLKGISDMGFTHMTEIQHKSIKPLLEGRDILAAAKTGSGKTLAFLIPAVELIYK-- 276
Query: 446 SSSTTQLVP--PIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRL 503
+ +P V+IL PTRELA Q + + NH ++GG+ + ++L
Sbjct: 277 ----LKFMPRNGTGVIILSPTRELAMQTYG-VLKEVMNHHVHTYGLIMGGSNRSAEAQKL 331
Query: 504 ESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLP 563
+ I+VATPGRLLDH++N G + L+ LV+DEAD +L++GF ++++ I+ LP
Sbjct: 332 -GNGINIIVATPGRLLDHMQNTPGFMYK--NLQCLVIDEADRILEVGFEEEMKQIIKLLP 388
Query: 564 RRRQSLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQI 617
+RRQ++LFSAT ++ + LK+E Y+ T ++Q +V P E F +
Sbjct: 389 KRRQTMLFSATQTRKVEDLARISLKKEPLYVGVDDNKETATVDGLEQGYVVCPSEKRFLL 448
Query: 618 LHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEF 677
L LK++ K++VF S+ M Y LL + + V ++ ++ Q R +F
Sbjct: 449 LFTFLKKN----RKKKLMVFFSSCMSVKYHYELLNYIDLPVLAIHGKQKQTKRTTTFFQF 504
Query: 678 RASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEG--VLLL 735
++ IL+ +DV+ARG+D P+V +VQ P D ++YIHR+GRT R G G G +L+L
Sbjct: 505 CNAESGILLCTDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTAR-GINGRGHALLIL 563
Query: 736 APWEEYFLDDLKD--LPLDKLQLPHLN-PEIQLQMDNHMAK--IDNNVKEAAYHAWLGYY 790
P E FL LK +PL + + +IQ Q++ + K + + AY A++ Y
Sbjct: 564 RPEELGFLRYLKQARVPLSEFEFSWSKISDIQSQLEKLIEKNYFLHKSAQEAYKAYIRAY 623
Query: 791 NS-----IREIGRDKTTLVELANKFAQSIGLQRPP 820
+S I +G ++L NK + S G + PP
Sbjct: 624 DSHSLKQIYNVGN-----LDL-NKVSLSFGFKVPP 652
>gi|431792618|ref|YP_007219523.1| DNA/RNA helicase [Desulfitobacterium dichloroeliminans LMG P-21439]
gi|430782844|gb|AGA68127.1| DNA/RNA helicase, superfamily II [Desulfitobacterium
dichloroeliminans LMG P-21439]
Length = 500
Score = 212 bits (540), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 138/393 (35%), Positives = 212/393 (53%), Gaps = 25/393 (6%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F E G+S IK++ G+ + T +QE T+ LEGKD + +A+TGTGK+ AF +P I+
Sbjct: 4 FKELGLSEPLIKSVLNMGFEEATPIQEQTIPLALEGKDVIGQAQTGTGKTAAFGIPLIQK 63
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+ + + I ++L PTRELA Q+A E + + GI L + GG
Sbjct: 64 IAETSED--------IQGIVLTPTRELAVQVAEE-LNKIGQFKGIRTLPIYGGQEIDRQI 114
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
R L+ P I+VATPGRL+DH+ ++ +RL + M++LDEAD +L++GF +D+E I+
Sbjct: 115 RALKKRP-HIIVATPGRLMDHMRRRT---IRLQNINMVILDEADEMLNMGFVEDIETILQ 170
Query: 561 CLPRRRQSLLFSATMPKELVLKREHTYIDTVGLGSVE----TPVKIKQSCLVAPHELHFQ 616
+P RQ+LLFSATMP++ + ++ L S++ T I+Q L P ++ F
Sbjct: 171 EIPEARQTLLFSATMPRQ-IQNLAQKFMKDPELISIKGKEVTVANIEQDYLEVPEKMKFD 229
Query: 617 ILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEE 676
+L LL + +PD IVF T L L + + ++ Q RD + +
Sbjct: 230 VLCRLLD---IQSPDL-AIVFGRTKSRVDELSEALNKRGYSAEGIHGDLSQSKRDSVMRQ 285
Query: 677 FRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLA 736
F+ +LV +DV+ARG+D VT V IP D E Y+HR+GRTGR GK G V +
Sbjct: 286 FKEGSIEVLVATDVAARGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAGKTGLAVTFVT 345
Query: 737 PWEEYFLDDLKDLPLDKL---QLPHLNPEIQLQ 766
P E L ++ L K+ +P + I++Q
Sbjct: 346 PREIGHLRLIEQLTKRKITRKNIPTMIEAIEVQ 378
>gi|440637342|gb|ELR07261.1| ATP-dependent RNA helicase dbp4 [Geomyces destructans 20631-21]
Length = 802
Score = 212 bits (539), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 156/490 (31%), Positives = 258/490 (52%), Gaps = 37/490 (7%)
Query: 366 KKEKREEEPILSQ-KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAK 424
+KE +E +P ++ K F +S T K L A+ + +T +Q + L+ KD + AK
Sbjct: 36 EKEIKELDPKVADIKDFQHLPLSEPTSKGLDASHFKTLTDIQSKAIPLALKSKDILGAAK 95
Query: 425 TGTGKSIAFLLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDG 484
TG+GK++AFL+P +E + + + L LI+ PTRELA QI E + + +
Sbjct: 96 TGSGKTLAFLVPVLENLYRQKWTELDGL----GALIISPTRELAIQIF-EVLRKIGRYHS 150
Query: 485 IGVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEAD 544
++GG + ++ RL ILV TPGR+L H++ + V L+MLVLDEAD
Sbjct: 151 FSAGLVIGGRSLQEERERLGR--MNILVCTPGRMLQHMDQTAAFEVD--NLQMLVLDEAD 206
Query: 545 HLLDLGFRKDVENIVDCLPRRRQSLLFSATMPKEL-----VLKREHTYIDTVGLGSVETP 599
+LD+GF+ V+ I+D LP+ RQ++LFSAT K++ + +E Y+ + TP
Sbjct: 207 RILDMGFQTSVDAILDHLPKDRQTMLFSATQTKKVSDLARLSLKEPEYVAVHEAATSATP 266
Query: 600 VKIKQSCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK--MN 657
++Q +V P L+ ++ ++ K++VF S+G +Y R ++ +
Sbjct: 267 TTLQQHYIVVPLAEKLNTLYSFIRANLKA----KIVVFMSSGKQVRFVYESFRHIQPGIP 322
Query: 658 VREMYSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIH 717
+ ++ R+ Q R I+ +F +S+ L +DV ARG+D+P V V+Q+ P D + YIH
Sbjct: 323 LLHLHGRQKQTARLDITSKFSSSQNSCLFATDVVARGLDFPAVDWVIQMDCPEDADTYIH 382
Query: 718 RLGRTGREGKEGEGVLLLAPWEEY-FLDDLKD--LPLDKLQL---PHLNPEIQLQMDNHM 771
R+GRT R + G GV+ L P EE L LK +P++K+++ + + QLQ+ M
Sbjct: 383 RVGRTARYERAGRGVMFLDPTEEEGMLARLKHKKVPIEKIKVRTNKQQSVQKQLQV---M 439
Query: 772 AKIDNNVKEAAYHAWLGYYNSIREIGRDKTTL----VELANKFAQSIGLQRPPPL-FRKT 826
D +K A++ Y S+ + +DK ++L FA S+GL P + F+K
Sbjct: 440 CFQDPELKYLGQKAFVSYTRSVY-LQKDKEIFKIDEIDLEG-FASSMGLPGAPKIKFQKG 497
Query: 827 ALKMGLKDIP 836
LK+ P
Sbjct: 498 NDAKKLKNAP 507
>gi|408394462|gb|EKJ73670.1| hypothetical protein FPSE_06288 [Fusarium pseudograminearum CS3096]
Length = 791
Score = 212 bits (539), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 152/475 (32%), Positives = 242/475 (50%), Gaps = 30/475 (6%)
Query: 377 SQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLP 436
+ K F +S T + L A + +T VQ + L+GKD + AKTG+GK++AFL+P
Sbjct: 49 ATKNFSHLPLSVPTAEGLEIAHFQTLTDVQAEAVPLALKGKDILGAAKTGSGKTLAFLIP 108
Query: 437 AIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRF 496
+E + +A + L LI+ PTRELA+QI E + + ++GG
Sbjct: 109 VLEKLYRAQWTEFDGL----GALIISPTRELAAQIF-EVLKKVGTKHSFSAGLVIGGKSL 163
Query: 497 KVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVE 556
K + RL D ILV TPGR+L H + +G L++LVLDEAD ++D+GF+ V+
Sbjct: 164 KEEADRL--DRMNILVCTPGRMLQHFDQTAGFDAN--NLQILVLDEADRIMDMGFQSAVD 219
Query: 557 NIVDCLPRRRQSLLFSATMPKEL-----VLKREHTYIDTVGLGSVETPVKIKQSCLVAPH 611
+++ LPR RQ+L+FSAT K++ + ++ Y+ TP ++Q +V P
Sbjct: 220 ALIEHLPRERQTLMFSATQSKKVSDLARLSLKDPEYVSVHEAAVSATPTNLQQHYIVTPL 279
Query: 612 ELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK--MNVREMYSRKPQLY 669
L+ +K ++ K+IVF S+G +Y R ++ + + ++ R+ Q
Sbjct: 280 TEKLDTLYGFIKANL----KSKIIVFLSSGKQVRFVYESFRHLQPGIPLLHLHGRQKQGA 335
Query: 670 RDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEG 729
R I+ F A+K+ L +DV ARG+D+P V V+Q P D + YIHR+GRT R G
Sbjct: 336 RMEITSRFTAAKQTCLFATDVVARGIDFPAVDWVIQADCPEDVDTYIHRVGRTARYESNG 395
Query: 730 EGVLLLAPWEEYFL---DDLKDLPLDKLQLPHLNPEIQLQMDNHMAKIDNNVKEAAYHAW 786
VL L P EE + +LK +P+ K+ + + M + ++K A+
Sbjct: 396 RAVLFLDPSEEPGMLKKLELKKIPIQKVNVKEKKKKSIKDQLQSMCFQNPDLKYLGQKAF 455
Query: 787 LGYYNSIREIGRDKTTL----VELANKFAQSIGLQRPPPL-FRKTALKMGLKDIP 836
+ Y SI + RDK ++L + FA S+GL P + FRK +K+ P
Sbjct: 456 ISYSRSIH-LQRDKDVFKFNKLDL-DGFAASLGLPGTPQVKFRKGEDIKKIKNAP 508
>gi|68470912|ref|XP_720463.1| hypothetical protein CaO19.2712 [Candida albicans SC5314]
gi|68471370|ref|XP_720233.1| hypothetical protein CaO19.10227 [Candida albicans SC5314]
gi|74627403|sp|Q5AF95.1|DBP4_CANAL RecName: Full=ATP-dependent RNA helicase DBP4
gi|46442091|gb|EAL01383.1| hypothetical protein CaO19.10227 [Candida albicans SC5314]
gi|46442332|gb|EAL01622.1| hypothetical protein CaO19.2712 [Candida albicans SC5314]
Length = 765
Score = 212 bits (539), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 144/463 (31%), Positives = 248/463 (53%), Gaps = 34/463 (7%)
Query: 377 SQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLP 436
S +F + I+ T+K L A ++ +T +Q+ T+ L+G+D + A+TG+GK++AFL+P
Sbjct: 46 SVSQFSDLPITENTLKGLKEATFVSLTDIQKKTIPIALKGEDLMGTARTGSGKTLAFLIP 105
Query: 437 AIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRF 496
IE++++ + L LI+ PTRELA QI E + + ++ + GG
Sbjct: 106 VIESLIRNKITEYDGLA----ALIVSPTRELAVQIF-EVLTKIGKYNTFSAGLVTGGKDV 160
Query: 497 KVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVE 556
+ ++ R+ ILV TPGR+ H+ G+ L++LVLDEAD LD+GF+K ++
Sbjct: 161 QFEKERVSR--MNILVGTPGRISQHLNEAVGMETS--NLQVLVLDEADRCLDMGFKKQID 216
Query: 557 NIVDCLPRRRQSLLFSATMPKEL--VLKREHTYIDTVGLGSVE----TPVKIKQSCLVAP 610
NI+ LP RQ+LLFSAT + + + + T + +G+ S + TP ++Q + P
Sbjct: 217 NILGHLPTTRQTLLFSATQSESVNDLARLSLTNPNKIGVSSDQEVSATPESLEQYYVKVP 276
Query: 611 HELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK--MNVREMYSRKPQL 668
+ +L +K H+ K++VF S+ Y R ++ +++ ++Y R Q
Sbjct: 277 LDEKLDVLWSFIKSHLKS----KILVFFSSSKQVQYTYETFRTLQPGISLMKLYGRHKQT 332
Query: 669 YRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKE 728
R + +F ++ L +D+ ARG+D+P + VVQV P D Y+HR+GR+ R G++
Sbjct: 333 SRLETTMKFSQAQHACLFATDIVARGLDFPAIDWVVQVDCPEDAATYVHRVGRSARFGRK 392
Query: 729 GEGVLLLAPWEEYFLDDLKDLPLDKLQLPHLN------PEIQLQMDNHMAKIDNNVKEAA 782
G+ +L+L P EE + LK L + K++ +N I+ Q+ + K D +K
Sbjct: 393 GKSLLMLLPSEEEGM--LKRLKIHKIEPKLMNIKQKSKKSIRPQLQSLCFK-DPVMKNLG 449
Query: 783 YHAWLGYYNSIREIGRDKTT--LVEL-ANKFAQSIGLQRPPPL 822
A++ Y+ S+ I +DK + EL A +A S+GL P +
Sbjct: 450 QRAFIAYFKSVH-IQKDKDVFKVEELPAESYAASLGLPGAPKI 491
>gi|50545487|ref|XP_500281.1| YALI0A20328p [Yarrowia lipolytica]
gi|74660175|sp|Q6CGD1.1|DBP4_YARLI RecName: Full=ATP-dependent RNA helicase DBP4
gi|49646146|emb|CAG84219.1| YALI0A20328p [Yarrowia lipolytica CLIB122]
Length = 740
Score = 212 bits (539), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 162/496 (32%), Positives = 257/496 (51%), Gaps = 31/496 (6%)
Query: 351 IRKEISKNKLNGNGEKKEK-REEEPILSQKRFDECGISPLTIKALTAAGYIQMTRVQEAT 409
I++E K KL+ E+ + E+E +F+E +S TI+ L + Y+ T VQ+
Sbjct: 10 IKREEHKQKLSKLQERVDNFGEDEADKEVSKFEELPLSEATIEGLKNSHYVTCTDVQKRA 69
Query: 410 LSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELAS 469
+ L+G D + A+TG+GK++AFL+P +E + + S V + L++ PTRELA
Sbjct: 70 IPPALQGHDLLGAARTGSGKTLAFLVPVLECLFRNKWSD----VDGLGALVISPTRELAV 125
Query: 470 QIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLS 529
QI + + H L ++GG ++ RL IL+ TPGRLL H++ SG
Sbjct: 126 QIFQVLRKIGRCHSFSAGL-VIGGKDVAMEADRLAK--LNILICTPGRLLQHMDQTSGFD 182
Query: 530 VRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQSLLFSATMPKELV-LKR----E 584
L +KMLVLDEAD +LD+GF+K ++ I++ LP RQ+LLFSAT K + L R +
Sbjct: 183 --LSNVKMLVLDEADRILDMGFKKTMDAILENLPVDRQTLLFSATQTKSVSDLARLSLAD 240
Query: 585 HTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVT 644
YI + TP ++Q+ + + L L+ H +K+IVF S+
Sbjct: 241 PKYISANPDTTSSTPKNLEQNYVCVELQDKLDTLWGFLRTHT----KFKIIVFFSSSKQV 296
Query: 645 SLLYLLLREMK--MNVREMYSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTS 702
+Y R ++ + + ++ ++ Q R + +F + L +D+ ARG+D+P V
Sbjct: 297 RYVYETFRTLQPGIPLLHLHGKQKQGARMDVVSKFSKASSSCLFATDIVARGIDFPAVHW 356
Query: 703 VVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLAPWEEYFLD---DLKDLPLDKLQL-PH 758
VVQV P D YIHR+GR+ R GK G+ +L L P EE + + K +P++KL + P+
Sbjct: 357 VVQVDCPEDAATYIHRVGRSARFGKSGKALLFLTPTEEPAMIQRLEAKHIPINKLTIRPN 416
Query: 759 LNPEIQLQMDNHMAKIDNNVKEAAYHAWLGYYNSIREIGRDKTTLVEL---ANKFAQSIG 815
I+ Q+ K +K A++ YY SI I +DK + FA+S+G
Sbjct: 417 KKKSIKNQLQALCFK-SPEIKYLGQKAFISYYKSIF-IQKDKEIFQFEKIPSEAFAESLG 474
Query: 816 LQRPPPL-FRKTALKM 830
L P + K+A KM
Sbjct: 475 LPGAPQIKLGKSAEKM 490
>gi|326473030|gb|EGD97039.1| ATP-dependent RNA helicase DBP4 [Trichophyton tonsurans CBS 112818]
Length = 703
Score = 212 bits (539), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 161/498 (32%), Positives = 253/498 (50%), Gaps = 43/498 (8%)
Query: 367 KEKREEEPILSQKR-------------FDECGISPLTIKALTAAGYIQMTRVQEATLSAC 413
K KR E+ I S K+ F + +S T L+A+ + ++T +Q +
Sbjct: 25 KRKRNEDDIASLKQRVAELDTKAAIESFTDLPLSEPTRLGLSASHFKELTDIQSRAIPHA 84
Query: 414 LEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAA 473
L+G+D + AKTG+GK++AFL+P +E + + + L LI+ PTRELA QI
Sbjct: 85 LQGRDILGAAKTGSGKTLAFLVPVLENLFRKQWTEYDGL----GALIISPTRELAIQIF- 139
Query: 474 EAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLM 533
E + + + ++GG + +Q RL ILV TPGR+L H++ +
Sbjct: 140 EVLRKIGRYHTFSAGLVIGGKSLQEEQERLGR--MNILVCTPGRMLQHMDQTAAFDTD-- 195
Query: 534 GLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQSLLFSATMPKEL-----VLKREHTYI 588
++MLVLDEAD ++D+GF+ V+ IV+ LP+ RQ++LFSAT K++ + ++ YI
Sbjct: 196 NIQMLVLDEADRIMDMGFQNTVDAIVEHLPKERQTMLFSATQTKKVSDLARLSLQDPEYI 255
Query: 589 DTVGLGSVETPVKIKQSCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLY 648
S TP ++Q +V P L ++ + KVIVF S+ +Y
Sbjct: 256 SVHQAASSATPSTLQQHYVVTPLPDKLDTLWSFIRSSLKS----KVIVFFSSSKEVRFVY 311
Query: 649 LLLREMK--MNVREMYSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQV 706
R+M+ + + ++ R+ Q R I+ +F ASK L +DV ARG+D+P V V+Q+
Sbjct: 312 EAFRQMQPGIPLLHLHGRQKQGARLDITHKFSASKNSCLFATDVVARGLDFPAVDWVIQL 371
Query: 707 GIPPDREQYIHRLGRTGREGKEGEGVLLLAPWEEY-FLDDL--KDLPLDKLQL-PHLNPE 762
P D + YIHR+GRT R ++G VL L P EE L L K +P++K+ + +
Sbjct: 372 DCPEDSDTYIHRVGRTARYERDGRAVLFLDPSEEIGMLSRLEQKKIPIEKINIRANKQQS 431
Query: 763 IQLQMDNHMAKIDNNVKEAAYHAWLGYYNSIREIGRDKTTLVELA---NKFAQSIGLQRP 819
I+ Q+ N M D +K A+ Y SI I +DK A ++A S+GL
Sbjct: 432 IKHQLQN-MCFKDPQLKYLGQKAFTSYVKSI-HIQKDKEVFDVKALPLEEYAASLGLPGA 489
Query: 820 PPL-FRKTALKMGLKDIP 836
P + F K LK+ P
Sbjct: 490 PRIKFIKGEDTKSLKNAP 507
>gi|238881563|gb|EEQ45201.1| hypothetical protein CAWG_03515 [Candida albicans WO-1]
Length = 765
Score = 212 bits (539), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 144/463 (31%), Positives = 248/463 (53%), Gaps = 34/463 (7%)
Query: 377 SQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLP 436
S +F + I+ T+K L A ++ +T +Q+ T+ L+G+D + A+TG+GK++AFL+P
Sbjct: 46 SVSQFSDLPITENTLKGLKEATFVSLTDIQKKTIPIALKGEDLMGTARTGSGKTLAFLIP 105
Query: 437 AIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRF 496
IE++++ + L LI+ PTRELA QI E + + ++ + GG
Sbjct: 106 VIESLIRNKITEYDGLA----ALIVSPTRELAVQIF-EVLTKIGKYNTFSAGLVTGGKDV 160
Query: 497 KVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVE 556
+ ++ R+ ILV TPGR+ H+ G+ L++LVLDEAD LD+GF+K ++
Sbjct: 161 QFEKERVSR--MNILVGTPGRISQHLNEAVGMETS--NLQVLVLDEADRCLDMGFKKQID 216
Query: 557 NIVDCLPRRRQSLLFSATMPKEL--VLKREHTYIDTVGLGSVE----TPVKIKQSCLVAP 610
NI+ LP RQ+LLFSAT + + + + T + +G+ S + TP ++Q + P
Sbjct: 217 NILGHLPTTRQTLLFSATQSESVNDLARLSLTNPNKIGVSSDQEVSATPESLEQYYVKVP 276
Query: 611 HELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK--MNVREMYSRKPQL 668
+ +L +K H+ K++VF S+ Y R ++ +++ ++Y R Q
Sbjct: 277 LDEKLDVLWSFIKSHLKS----KILVFFSSSKQVQYTYETFRTLQPGISLMKLYGRHKQT 332
Query: 669 YRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKE 728
R + +F ++ L +D+ ARG+D+P + VVQV P D Y+HR+GR+ R G++
Sbjct: 333 SRLETTMKFSQAQHACLFATDIVARGLDFPAIDWVVQVDCPEDAATYVHRVGRSARFGRK 392
Query: 729 GEGVLLLAPWEEYFLDDLKDLPLDKLQLPHLN------PEIQLQMDNHMAKIDNNVKEAA 782
G+ +L+L P EE + LK L + K++ +N I+ Q+ + K D +K
Sbjct: 393 GKSLLMLLPSEEEGM--LKRLKIHKIEPKLMNIKQKSKKSIRPQLQSLCFK-DPVMKNLG 449
Query: 783 YHAWLGYYNSIREIGRDKTT--LVEL-ANKFAQSIGLQRPPPL 822
A++ Y+ S+ I +DK + EL A +A S+GL P +
Sbjct: 450 QRAFIAYFKSVH-IQKDKDVFKVEELPAESYAASLGLPGAPKI 491
>gi|157111113|ref|XP_001651396.1| DEAD box ATP-dependent RNA helicase [Aedes aegypti]
gi|108878542|gb|EAT42767.1| AAEL005744-PA [Aedes aegypti]
Length = 603
Score = 212 bits (539), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 149/468 (31%), Positives = 244/468 (52%), Gaps = 39/468 (8%)
Query: 373 EPILSQKRFDEC--GISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKS 430
E +L + F+ +S T+KA+ G+ +MT +Q + LEG+D + AKTG+GK+
Sbjct: 102 EILLGNQEFETLRGKVSDNTLKAIAEMGFTKMTEIQAKAIPPLLEGRDLIGSAKTGSGKT 161
Query: 431 IAFLLPAIEAVLKATSSSTTQLVP--PIYVLILCPTRELASQIAAEAIALLKNHDGIGVL 488
+AFL+P +E + K Q P V+I+ PTRELA QI L+ +H L
Sbjct: 162 LAFLIPVVELINK------LQFKPRNGTGVIIISPTRELAMQIFGVLKELMAHHHHTYGL 215
Query: 489 TLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLD 548
+ G +R +++ I+VATPGRLLDH++ + L+ LV+DE D +L+
Sbjct: 216 LMGGASRHTENEKL--GKGLNIVVATPGRLLDHLKGTPNFLFK--NLQCLVIDECDRILE 271
Query: 549 LGFRKDVENIVDCLPRRRQSLLFSATMPK------ELVLKREHTYIDTVGLGSVETPVKI 602
+GF +D++ I+ LP++RQ++LFSAT +L LK E Y+ + T +
Sbjct: 272 IGFEEDMKQIISILPKKRQTMLFSATQTSRTEELGKLALKSEPIYVGVDDHKTEATVTGL 331
Query: 603 KQSCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMY 662
+Q +V P E +L LK++ KV+VF S+ + + L + + V ++
Sbjct: 332 EQGYIVCPSEKRLLVLFTFLKKN----RKKKVMVFFSSCLSVKYHHELFNYIDLPVNSIH 387
Query: 663 SRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRT 722
++ Q R + +F ++ IL+ +DV+ARG+D P V +VQ P D ++YIHR+GRT
Sbjct: 388 GKQKQAKRTSVFFQFCNAESGILLCTDVAARGLDIPAVDWIVQYDPPNDTKEYIHRVGRT 447
Query: 723 GR-EGKEGEGVLLLAPWEEYFLDDLKD--LPLDKLQLPHLN-PEIQLQMDNHMAK--IDN 776
R E G +LLL P E FL LK +PL++ + +IQLQ++N ++K N
Sbjct: 448 ARGENICGHALLLLRPEEVEFLKYLKQAKVPLNEFEFSWSKIADIQLQLENLLSKNYFLN 507
Query: 777 NVKEAAYHAWLGYYNSIREIGRDKTTLVELAN----KFAQSIGLQRPP 820
+ A+ +++ Y G + + N K A++ G +PP
Sbjct: 508 QSGKLAFKSYVRAYE-----GHHMKDVFNVGNLDLVKVAKNFGFTQPP 550
>gi|302309551|ref|NP_986999.2| AGR333Cp [Ashbya gossypii ATCC 10895]
gi|442570164|sp|Q74Z73.2|HAS1_ASHGO RecName: Full=ATP-dependent RNA helicase HAS1
gi|299788412|gb|AAS54823.2| AGR333Cp [Ashbya gossypii ATCC 10895]
gi|374110250|gb|AEY99155.1| FAGR333Cp [Ashbya gossypii FDAG1]
Length = 504
Score = 212 bits (539), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 157/460 (34%), Positives = 247/460 (53%), Gaps = 38/460 (8%)
Query: 380 RFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIE 439
+FDE +S T+KA+ G+ +MT+VQ T+ + G+D + AKTG+GK++AFLLPAIE
Sbjct: 40 KFDELNLSSQTLKAIGKMGFTKMTQVQARTIPPLMAGRDVLGAAKTGSGKTLAFLLPAIE 99
Query: 440 AV--LKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHD-GIGVLTLVGGTRF 496
+ LK + T V+++ PTRELA QI A L++ H G+ ++GG
Sbjct: 100 MLHSLKFKPRNGTG------VIVITPTRELALQIFGVARELMEFHSQTFGI--VIGGANR 151
Query: 497 KVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVE 556
+ + +L + +L+ATPGRLLDH++N G + LK LV+DEAD +L++GF +++
Sbjct: 152 RQEAEKL-AKGVNLLIATPGRLLDHLQNTKGFVFK--NLKALVIDEADRILEIGFEDEMK 208
Query: 557 NIVDCLPRR-RQSLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSCLVA 609
I+ LP RQS+LFSAT + + L+ +I+ T ++Q +V
Sbjct: 209 QIIKILPNEDRQSMLFSATQTTKVEDLARISLRPGPLFINVDSEKETSTADGLEQGYVVC 268
Query: 610 PHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLY 669
+ F +L LK+ + K+IVF S+ LL + + V E++ ++ Q
Sbjct: 269 DSDKRFLLLFTFLKKF----QNKKIIVFLSSCNSVKYYAELLNYIDLPVLELHGKQKQQK 324
Query: 670 RDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGK-E 728
R EF ++R ILV +DV+ARG+D P V ++Q P D YIHR+GRT R K +
Sbjct: 325 RTNTFFEFCNAERGILVCTDVAARGLDIPAVDWIIQFDPPDDPRDYIHRVGRTARGTKGK 384
Query: 729 GEGVLLLAPWEEYFLDDLK--DLPLDKLQLPH---LNPEIQLQMDNHMAKIDNNVKEAAY 783
G+ ++ L P E FL LK +PL++ + P N + QL+ N + + Y
Sbjct: 385 GKSLMFLTPHELGFLRYLKAAKVPLNEYEFPANKIANVQSQLEKLLKTNYELNKIAKDGY 444
Query: 784 HAWLGYY--NSIREIGR-DKTTLVELANKFAQSIGLQRPP 820
++L Y +S++ + + DK LV K A+S G PP
Sbjct: 445 RSYLQAYASHSLKTVYQIDKLDLV----KVAKSYGFPVPP 480
>gi|195502468|ref|XP_002098237.1| GE10265 [Drosophila yakuba]
gi|194184338|gb|EDW97949.1| GE10265 [Drosophila yakuba]
Length = 681
Score = 212 bits (539), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 148/453 (32%), Positives = 247/453 (54%), Gaps = 35/453 (7%)
Query: 385 GISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKA 444
+S T++A+ G+ +MT +Q +L+ L+G+D V A+TG+GK++AFL+PA+E + K
Sbjct: 194 AVSEATLRAVKEMGFTEMTEIQAKSLTPLLKGRDLVGAAQTGSGKTLAFLIPAVELINK- 252
Query: 445 TSSSTTQLVP--PIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRR 502
+ +P V+I+ PTREL+ Q L+ +H L + GG+ +V+ +
Sbjct: 253 -----LRFMPRNGTGVIIISPTRELSMQTFGVLKELMAHHHHTYGLVM-GGSNRQVESEK 306
Query: 503 LESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCL 562
L ILVATPGRLLDH++N + L+ L++DE D +L++GF ++++ I++ L
Sbjct: 307 L-GKGINILVATPGRLLDHLQNSPDFLYK--NLQCLIIDEVDRILEIGFEEELKQIINLL 363
Query: 563 PRRRQSLLFSATMP------KELVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQ 616
P+RRQ++LFSAT +L LK E Y+ T ++Q +V P E
Sbjct: 364 PKRRQTMLFSATQTARIEALSKLALKSEPIYVGVHDNQDTATVDGLEQGYIVCPSEKRLL 423
Query: 617 ILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEE 676
+L LK++ KV+VF S+ M + L + + V ++ ++ Q R +
Sbjct: 424 VLFTFLKKN----RKKKVMVFFSSCMSVKYHHELFNYIDLPVTSIHGKQKQTKRTTTFFQ 479
Query: 677 FRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGR-EGKEGEGVLLL 735
F ++ IL+ +DV+ARG+D P V +VQ P D +YIHR+GRT R G G +LL+
Sbjct: 480 FCNAESGILLCTDVAARGLDIPQVDWIVQYDPPDDPREYIHRVGRTARGSGTSGHALLLM 539
Query: 736 APWEEYFLDDLK--DLPLDKLQLPHLN-PEIQLQMDNHMAK---IDNNVKEAAYHAWLGY 789
P E FL LK +PL++ + +IQLQ++ +AK ++ + KE A+ +++
Sbjct: 540 RPEELGFLRYLKAAKVPLNEFEFSWQKIADIQLQLEKLIAKNYFLNQSAKE-AFKSYVRA 598
Query: 790 YNS--IREIGRDKTTLVELANKFAQSIGLQRPP 820
Y+S +++I T ++ A+S G PP
Sbjct: 599 YDSHQLKQIFNVNTLDLQAV---AKSFGFLVPP 628
>gi|312129451|ref|YP_003996791.1| dead/deah box helicase domain-containing protein [Leadbetterella
byssophila DSM 17132]
gi|311905997|gb|ADQ16438.1| DEAD/DEAH box helicase domain protein [Leadbetterella byssophila
DSM 17132]
Length = 619
Score = 212 bits (539), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 141/427 (33%), Positives = 232/427 (54%), Gaps = 28/427 (6%)
Query: 380 RFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIE 439
+F E IS +KA+ G+ + T +Q A + + G+D + +A+TGTGK+ AF +PAIE
Sbjct: 69 KFSELPISDYIVKAVEEMGFTESTPIQTAAIPVVMSGRDVIGQAQTGTGKTAAFGIPAIE 128
Query: 440 AVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVD 499
V TQ VLILCPTRELA Q+ + L K G+ V + GG ++
Sbjct: 129 HV--NAEDRNTQ------VLILCPTRELALQVKEQLTLLAKYKKGLLVSAIYGGESYERQ 180
Query: 500 QRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIV 559
L+ QI+V TPGR++DHIE K+ ++L + M++LDEAD +L++GFR+D+E I+
Sbjct: 181 FANLKRG-TQIVVGTPGRIMDHIEKKT---LKLDNISMVILDEADEMLNMGFREDIEQIL 236
Query: 560 DCLPRRRQSLLFSATMPKEL--VLKREHTYIDTVGLGSVE-TPVKIKQSCLVAPHELHFQ 616
RQ++LFSATM KE+ + K+ + V + E T I+QS + E F+
Sbjct: 237 SFAKEDRQTVLFSATMSKEILNITKKFQNDPEIVKVTRKEITNTNIEQSYYLVKKEAKFE 296
Query: 617 ILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMN---VREMYSRKPQLYRDRI 673
++ L+ H L ++VFC+T S + ++ E++ N ++ Q R+++
Sbjct: 297 LMVRLIDVHDLQL----MLVFCNT---KSKVDEIVEELQANGYAAEGLHGDMRQAARNQV 349
Query: 674 SEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVL 733
+FR ILV +DV+ARG+D V +V+ +P D E Y+HR+GRTGR GK G+ L
Sbjct: 350 MNKFRNGNTKILVATDVAARGIDVSGVDAVINYDLPMDLEYYVHRIGRTGRAGKLGKAFL 409
Query: 734 LLAPWEEYFLDDLKD---LPLDKLQLPHLNPEIQLQMDNHMAKIDNNVKEAAYHAWLGYY 790
+ + + DL+ + + + ++P + +++ + KI N+ E A+
Sbjct: 410 FITKRDRSRMRDLEQYTKVAIPQGKIPTSADLEKSRINKFVEKIRENIVEDTNPAFEKIV 469
Query: 791 NSIREIG 797
+ ++E G
Sbjct: 470 DQLKEEG 476
>gi|119191710|ref|XP_001246461.1| hypothetical protein CIMG_00232 [Coccidioides immitis RS]
gi|118575177|sp|Q1EB31.1|DBP4_COCIM RecName: Full=ATP-dependent RNA helicase DBP4
gi|392864308|gb|EAS34862.2| ATP-dependent RNA helicase DBP4 [Coccidioides immitis RS]
Length = 806
Score = 212 bits (539), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 145/455 (31%), Positives = 235/455 (51%), Gaps = 31/455 (6%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F E +S T++ L+A+ + +T +Q + ++G+D + AKTG+GK++AFL+P +E
Sbjct: 50 FSELPLSDATLQGLSASHFKTLTDIQSRAVPHAIKGRDILGAAKTGSGKTLAFLVPVLEN 109
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+ + + L LIL PTRELA QI E + + + ++GG + +Q
Sbjct: 110 LYRKQWTEYDGL----GALILSPTRELAIQIF-EVLRKIGRYHTFSAGLVIGGKSLQEEQ 164
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
RL ILV TPGR+L H++ + ++MLVLDEAD ++D+GF+ V+ IV+
Sbjct: 165 ERLGR--MNILVCTPGRMLQHMDQTAAFDT--AHIQMLVLDEADRIMDMGFQSTVDAIVE 220
Query: 561 CLPRRRQSLLFSATMPKEL-----VLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHF 615
LP+ RQ++LFSAT K++ + R+ YI S TP ++Q +V P
Sbjct: 221 HLPKERQTMLFSATQTKKVSDLARLSLRDPEYISVHEAASSATPASLQQHYVVTPLPEKL 280
Query: 616 QILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK--MNVREMYSRKPQLYRDRI 673
L ++ T K++VF S+ +Y R M+ + + ++ R+ Q R I
Sbjct: 281 DTLWSFIR----NTLKSKILVFFSSSKQVRFVYEAFRHMQPGIPLLHLHGRQKQSARIDI 336
Query: 674 SEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVL 733
+ +F +K L ++DV+ARG+D+P V V+Q+ P D + YIHR+GRT R ++G VL
Sbjct: 337 TSKFSRAKYSCLFSTDVAARGLDFPAVDWVIQLDCPEDADTYIHRVGRTARYERDGRAVL 396
Query: 734 LLAPWEEYFLDDLKDLPLDKLQLPHLNPEIQLQMD-----NHMAKIDNNVKEAAYHAWLG 788
L P EE + LK L K+ + +N + + Q +M D +K A+
Sbjct: 397 FLDPSEEEGM--LKRLEQKKIPIERINIKAKKQQSIMNQLQNMCFKDPALKYLGQKAFTS 454
Query: 789 YYNSIREIGRDKTTLVELA---NKFAQSIGLQRPP 820
Y S+ I +DK + +FA S+GL P
Sbjct: 455 YVKSVH-IQKDKDVFNVKSLPLEEFASSLGLPGAP 488
>gi|357627453|gb|EHJ77133.1| hypothetical protein KGM_05863 [Danaus plexippus]
Length = 824
Score = 212 bits (539), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 158/462 (34%), Positives = 243/462 (52%), Gaps = 41/462 (8%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
K F + +S T+K L YI T +Q +S L+GKD + AKTG+GK++AFL+P +
Sbjct: 50 KTFKDLPLSQKTLKGLKDNNYITPTDIQRQAISYALQGKDILGAAKTGSGKTLAFLVPIL 109
Query: 439 EAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
E + T+L + L++ PTRELA QI + HD L ++GG K
Sbjct: 110 ELLF---CKKWTRL-DGVGALVISPTRELAYQIYETLRKVGHLHDFSAGL-IIGGQNLKF 164
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
+++R+ D IL+ TPGRLL H++ L++LVLDEAD LD+GF+ + I
Sbjct: 165 ERKRM--DQINILICTPGRLLQHMDENPLFDCS--QLQILVLDEADRCLDMGFQTTMNAI 220
Query: 559 VDCLPRRRQSLLFSATMPKELV-LKREH----TYIDTVGLGSVETPVKIKQSCLVAPHEL 613
++ LP +RQ+LLFSAT K + L R TY+ + TP ++QS +V +
Sbjct: 221 IENLPPKRQTLLFSATQTKSVKDLARLSLSFPTYVAPHEQANTVTPESLQQSYIVCEIDE 280
Query: 614 HFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK--MNVREMYSRKPQLYRD 671
IL ++ H+ KV+VF +T Y L +++ +++ +Y Q R+
Sbjct: 281 KLGILWSFIRNHL----KQKVLVFMATCKQVKYTYDLFCKLRPGVSLLALYGTLHQEKRE 336
Query: 672 RISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGRE--GKEG 729
+I EEF ++L +D+++RG+D+P V V+Q P + + YIHR GRT R GK G
Sbjct: 337 KIYEEFCRKSNVVLFATDLASRGLDFPRVNWVLQFDCPENVDTYIHRAGRTARGVFGK-G 395
Query: 730 EGVLLLAPWEEYFLDDL-------KDLPLD--KLQLPHLNPEIQLQMDNHMAKIDNNVKE 780
EG+L+L P EE +DDL K + +D KLQ P E L DN +K+
Sbjct: 396 EGLLMLLPHEEKIVDDLTKSKIPIKKISVDPSKLQSPQRKIE-SLLSDN------TELKQ 448
Query: 781 AAYHAWLGYYNSIREIGRDKTTLVEL--ANKFAQSIGLQRPP 820
A A++ Y SI + + ++L + +A+S+GL PP
Sbjct: 449 TAQRAFVSYVKSIFLMKNKEIFNIQLLDTDAYARSLGLINPP 490
>gi|31981163|ref|NP_080136.2| ATP-dependent RNA helicase DDX18 [Mus musculus]
gi|56404614|sp|Q8K363.1|DDX18_MOUSE RecName: Full=ATP-dependent RNA helicase DDX18; AltName: Full=DEAD
box protein 18
gi|20380248|gb|AAH28246.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 18 [Mus musculus]
gi|75517578|gb|AAI03777.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 18 [Mus musculus]
gi|148707837|gb|EDL39784.1| mCG1040626 [Mus musculus]
gi|187954459|gb|AAI41231.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 18 [Mus musculus]
gi|187954929|gb|AAI41232.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 18 [Mus musculus]
Length = 660
Score = 212 bits (539), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 148/418 (35%), Positives = 229/418 (54%), Gaps = 30/418 (7%)
Query: 390 TIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSST 449
T+KA+ G+ +MT +Q ++ LEG+D + AKTG+GK++AFL+P IE ++K
Sbjct: 180 TLKAIEEMGFKRMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPVIELIVK------ 233
Query: 450 TQLVP--PIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDP 507
+ +P VLIL PTRELA Q L+ +H L + G R Q+ L
Sbjct: 234 LKFMPRNGTGVLILSPTRELAMQTFGVLKELMTHHVHTYGLIMGGSNRSAEVQKLLNG-- 291
Query: 508 CQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQ 567
I+VATPGRLLDH++N G + L+ LV+DEAD +LD+GF ++++ I+ LP RRQ
Sbjct: 292 INIIVATPGRLLDHMQNTPGFMYK--NLQCLVIDEADRILDVGFEEELKQIIKLLPARRQ 349
Query: 568 SLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILHHL 621
++LFSAT ++ + LK+E Y+ V T ++Q +V P E F +L
Sbjct: 350 TMLFSATQTRKVEDLARISLKKEPLYVGVDDDKEVATVDGLEQGYVVCPSEKRFLLLFTF 409
Query: 622 LKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEFRASK 681
LK++ KV+VF S+ M Y LL + + V ++ ++ Q R +F +
Sbjct: 410 LKKN----RKKKVMVFFSSCMSVKYHYELLNYIDLPVLAIHGKQKQNKRTTTFFQFCNAD 465
Query: 682 RLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEG--VLLLAPWE 739
IL+ +DV+ARG+D P+V +VQ P D ++YIHR+GRT R G G G +L+L P E
Sbjct: 466 SGILLCTDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTAR-GLNGRGHALLILRPEE 524
Query: 740 EYFLDDLKD--LPLDKLQLPHLN-PEIQLQMDNHMAK--IDNNVKEAAYHAWLGYYNS 792
FL LK +PL++ +IQ Q++ + K + + AY +++ Y+S
Sbjct: 525 LGFLRYLKQSKVPLNQFDFSWSKVSDIQSQLEKLIEKNYFLHKSAQEAYKSYIRAYDS 582
>gi|159903626|ref|YP_001550970.1| ATP-dependent RNA helicase [Prochlorococcus marinus str. MIT 9211]
gi|159888802|gb|ABX09016.1| putative ATP-dependent RNA helicase [Prochlorococcus marinus str.
MIT 9211]
Length = 604
Score = 212 bits (539), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 141/409 (34%), Positives = 219/409 (53%), Gaps = 28/409 (6%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F+ G S I L + GY T +Q+A + G+D + +A+TGTGK+ AF LP +E
Sbjct: 54 FEGFGFSDDLINTLESKGYKDPTPIQKAAFPELMLGRDLLGQAQTGTGKTAAFALPILER 113
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+ + T + VL+L PTRELA Q+A A + + VL + GG+ F+
Sbjct: 114 IKQDTRAPQ--------VLVLAPTRELAMQVADSFRAYAQGRPEVQVLAVYGGSDFRAQI 165
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
L QI+V TPGR++DHI + G ++ L+ LVLDEAD +L +GF D+E I++
Sbjct: 166 NALRRG-VQIVVGTPGRVMDHI--RQGTFIK-TDLETLVLDEADEMLRMGFIDDIEWILE 221
Query: 561 CLPRRRQSLLFSATMPKELVLKREHTYIDTVGLGSVETPVK----IKQSCLVAPHELHFQ 616
LP +RQ + FSATMP E + + Y+ +++ K I+Q +V + +
Sbjct: 222 QLPAKRQMIFFSATMPSE-IRRLSKQYLHEPAEITIKAQKKEAQLIRQRYIVIQNSFKLE 280
Query: 617 ILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEE 676
L +L+ T D VI+F T +T L L + NV + PQ R+R E
Sbjct: 281 ALKRVLET----TADEGVIIFARTKAITLRLSESLEALNHNVAVLNGDVPQTLRERTIER 336
Query: 677 FRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLA 736
R ILV +DV+ARG+D + V+ +P D E Y+HR+GRTGR G+ GE +L ++
Sbjct: 337 LRQGGIDILVATDVAARGLDVERIGLVINYDMPFDSEAYVHRIGRTGRAGRTGEAILFVS 396
Query: 737 PWEEYFLDDLKDL---PLDKLQLPHLNPEIQLQMDNHMAKIDNNVKEAA 782
P E F+++L+ ++K+++P N EI Q + + K+ NN+ +A
Sbjct: 397 PRERSFINNLERAVGQSIEKMEIP--NNEIINQ--HRINKLKNNLSQAV 441
>gi|297734151|emb|CBI15398.3| unnamed protein product [Vitis vinifera]
Length = 492
Score = 212 bits (539), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 146/434 (33%), Positives = 238/434 (54%), Gaps = 34/434 (7%)
Query: 376 LSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLL 435
+S + F G+S T+KA+ G+ MT++Q + L GKD + A+TG+GK++AFL+
Sbjct: 1 MSTEAFSALGLSEPTMKAINDMGFGNMTQIQARAIPPLLLGKDVLGAARTGSGKTLAFLI 60
Query: 436 PAIEAVLKATSSSTTQLVP--PIYVLILCPTRELASQIAAEAIALLKNH-DGIGVLTLVG 492
PA+E + + +P V+++CPTRELA Q A A LLK H +G++ +G
Sbjct: 61 PAVELLYHIS------FMPRNGTGVVVICPTRELAIQTHAVAKDLLKYHTQTLGLV--IG 112
Query: 493 GTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFR 552
G+ + + RL + +LVATPGRLLDH++N G + LK L++DEAD +L+ F
Sbjct: 113 GSARRGEAERL-AKGANLLVATPGRLLDHLQNTKGFIYK--NLKCLIIDEADRILEANFE 169
Query: 553 KDVENIVDCLPRRRQSLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSC 606
++++ I+ LP+ RQ+ LFSAT K+ L + YID + T ++Q
Sbjct: 170 EEMKQIIKLLPKERQTALFSATQTKKVEDLARLSFQTTPVYIDVDDGRTKVTNEGLQQGY 229
Query: 607 LVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKP 666
V P F +L+ LK ++ KV+VF S+ LLR ++++ +++ ++
Sbjct: 230 CVVPSAKRFVLLYSFLKRNL----SKKVMVFFSSCNSVKYHSELLRYIQVDCLDIHGKQK 285
Query: 667 QLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGR-E 725
Q R +F +++ IL+ +DV+ARG+D PDV +VQ P + ++YIHR+GRT R E
Sbjct: 286 QQKRTSTFFDFCKAEKGILLCTDVAARGLDIPDVDWIVQYDPPDEPKEYIHRVGRTARGE 345
Query: 726 GKEGEGVLLLAPWEEYFLDDL-------KDLPLDKLQLPHLNPEIQLQMDNHMAKIDNNV 778
GK+G +L L P E FL L K+ D +L ++ ++ + N+ N
Sbjct: 346 GKKGNALLFLIPEELQFLRYLKAAKVPVKEYEYDVKKLANVQSHLEKLVSNNYYL--NKS 403
Query: 779 KEAAYHAWLGYYNS 792
+ AY +++ YNS
Sbjct: 404 AKDAYRSYILAYNS 417
>gi|194911317|ref|XP_001982328.1| GG11103 [Drosophila erecta]
gi|190656966|gb|EDV54198.1| GG11103 [Drosophila erecta]
Length = 683
Score = 212 bits (539), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 148/453 (32%), Positives = 247/453 (54%), Gaps = 35/453 (7%)
Query: 385 GISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKA 444
+S T++A+ G+ +MT +Q +L+ L+G+D V A+TG+GK++AFL+PA+E + K
Sbjct: 196 AVSEATLRAVKEMGFTEMTEIQAKSLTPLLKGRDLVGAAQTGSGKTLAFLIPAVELINK- 254
Query: 445 TSSSTTQLVP--PIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRR 502
+ +P V+I+ PTREL+ Q L+ +H L + GG+ +V+ +
Sbjct: 255 -----LRFMPRNGTGVIIISPTRELSMQTFGVLKELMAHHHHTYGLVM-GGSNRQVESEK 308
Query: 503 LESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCL 562
L ILVATPGRLLDH++N + L+ L++DE D +L++GF ++++ I++ L
Sbjct: 309 L-GKGINILVATPGRLLDHLQNSPDFLYK--NLQCLIIDEVDRILEIGFEEELKQIINLL 365
Query: 563 PRRRQSLLFSATMP------KELVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQ 616
P+RRQ++LFSAT +L LK E Y+ T ++Q +V P E
Sbjct: 366 PKRRQTMLFSATQTARIEALSKLALKSEPIYVGVHDNQDTATVDGLEQGYIVCPSEKRLL 425
Query: 617 ILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEE 676
+L LK++ KV+VF S+ M + L + + V ++ ++ Q R +
Sbjct: 426 VLFTFLKKN----RKKKVMVFFSSCMSVKYHHELFNYIDLPVTSIHGKQKQTKRTTTFFQ 481
Query: 677 FRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGR-EGKEGEGVLLL 735
F ++ IL+ +DV+ARG+D P V +VQ P D +YIHR+GRT R G G +LL+
Sbjct: 482 FCNAESGILLCTDVAARGLDIPQVDWIVQYDPPDDPREYIHRVGRTARGSGTSGHALLLM 541
Query: 736 APWEEYFLDDLK--DLPLDKLQLPHLN-PEIQLQMDNHMAK---IDNNVKEAAYHAWLGY 789
P E FL LK +PL++ + +IQLQ++ +AK ++ + KE A+ +++
Sbjct: 542 RPEELGFLRYLKAAKVPLNEFEFSWQKIADIQLQLEKLIAKNYFLNQSAKE-AFKSYVRA 600
Query: 790 YNS--IREIGRDKTTLVELANKFAQSIGLQRPP 820
Y+S +++I T ++ A+S G PP
Sbjct: 601 YDSHQLKQIFNVNTLDLQAV---AKSFGFLVPP 630
>gi|358058010|dbj|GAA96255.1| hypothetical protein E5Q_02919 [Mixia osmundae IAM 14324]
Length = 727
Score = 211 bits (538), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 145/380 (38%), Positives = 202/380 (53%), Gaps = 38/380 (10%)
Query: 416 GKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQL------------VPPIYVLILCP 463
G D ++K++TGTGK+IAFLLPA+EA L+ + + P+ LI+ P
Sbjct: 137 GLDLLIKSRTGTGKTIAFLLPALEAALRKVGQDPEPVRKPRGRFMRNTGIAPVRTLIISP 196
Query: 464 TRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLE-SDPCQILVATPGRLLDHI 522
TRELASQIA EA L+ N + + GG L+ S ILVATPGR +D +
Sbjct: 197 TRELASQIADEANKLMSNIRDCRAVFICGGMPKGPQFTDLQYSTHNLILVATPGRCIDLM 256
Query: 523 ENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLP--RRRQSLLFSATMPKEL- 579
+N + L G + LVLDEAD LLD+GF D+E I LP R++L+FSAT+ +
Sbjct: 257 QNSPDFAKALEGCETLVLDEADRLLDMGFTPDIEEICKHLPNVHNRRTLMFSATISPRVQ 316
Query: 580 -----VLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQI--LHHLLKEHILGTPDY 632
L+ + Y+DTV +I+Q+ + H QI L ++L + L P
Sbjct: 317 QAARAFLQPRYKYLDTVPASEANAHERIQQTVITC-DGAHDQISTLMNILAQDQLEHPLG 375
Query: 633 KVIVFCSTGMVTSLLYLLLREMKMN--------VREMYSRKPQLYRDRISEEFRASKR-- 682
K I+FCST +T L +K + V E++S K Q RD + FR R
Sbjct: 376 KAIIFCSTTKLTQYLTRTFAMLKRHLPWGRGTEVVEIHSGKEQRSRDSANRRFRGHDRSY 435
Query: 683 LILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLAPWEEYF 742
+L+TSDVSARG+DY VT V+Q+G+P DR+ Y HR+GRTGR G LLL P+E
Sbjct: 436 AVLITSDVSARGVDYKGVTRVIQMGLPKDRDTYTHRIGRTGRAEANGRADLLLLPFEA-- 493
Query: 743 LDDLKDLPLDKLQLPHLNPE 762
D + L+K+ L+ E
Sbjct: 494 --DSAQVMLNKMPFETLDSE 511
>gi|293610799|ref|ZP_06693099.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|292827143|gb|EFF85508.1| conserved hypothetical protein [Acinetobacter sp. SH024]
Length = 639
Score = 211 bits (538), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 129/379 (34%), Positives = 204/379 (53%), Gaps = 19/379 (5%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
K F E + +AL G+ T VQE ++ A LEGKD +V ++TG+GK+ AFLLP +
Sbjct: 26 KTFAEFSLHETLQQALEGLGFTTPTPVQEQSIPAALEGKDLLVSSQTGSGKTAAFLLPTL 85
Query: 439 EAVLKATS----SSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGT 494
+ + + V +L+LCPTRELA Q++ +AIA +++ G+ + ++GG
Sbjct: 86 HNLAGQETFVPFKERMKAVTQPNILVLCPTRELAQQVSQDAIAFVRHMKGVRIAAIMGGM 145
Query: 495 RFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKD 554
F ++L+ Q++VATPGRLLD + + ++L ++ L++DEAD +LDLGF +D
Sbjct: 146 PFGKQIQQLKG--AQVIVATPGRLLDLVNRRQ---LKLDKVEALIVDEADRMLDLGFSED 200
Query: 555 VENIVDCLPRRRQSLLFSATMPKELVLKREHTYIDTVGLGSVETPVKIKQSCLVAPH--- 611
+E I D RRQ+L+FSAT ++ E + + ++ET H
Sbjct: 201 LEAISDLAGNRRQTLMFSATFADRIIRLAERMMNEPERI-AIETGHSTNTDITQTLHWTD 259
Query: 612 --ELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLY 669
E ++L H L + L + +VF ST T +L L E +V ++ PQ
Sbjct: 260 GFEHKKKLLTHWLADETLD----QAVVFASTQEDTDMLAEELAEAGHSVVALHGAMPQTV 315
Query: 670 RDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEG 729
R+R R + ILV +DV+ARG+D P ++ V+ G+P E Y+HR+GRTGR G+ G
Sbjct: 316 RNRRLRSIREGRAKILVATDVAARGLDVPTISHVINFGLPMKHEDYVHRIGRTGRAGRTG 375
Query: 730 EGVLLLAPWEEYFLDDLKD 748
+ + L E + L+D
Sbjct: 376 QAITLATYRERGKIRALED 394
>gi|171683441|ref|XP_001906663.1| hypothetical protein [Podospora anserina S mat+]
gi|170941680|emb|CAP67334.1| unnamed protein product [Podospora anserina S mat+]
Length = 816
Score = 211 bits (538), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 155/471 (32%), Positives = 249/471 (52%), Gaps = 40/471 (8%)
Query: 380 RFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIE 439
+F + + T L A+ + +T +Q+A + L+G D + AKTG+GK++AFL+P +E
Sbjct: 63 KFTDLPLCAATASGLRASHFEVLTDIQKAAIPLALKGHDILGAAKTGSGKTLAFLVPVLE 122
Query: 440 AVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVD 499
+++A + L LI+ PTRELA QI + +NH L ++GG K +
Sbjct: 123 KLVQAQWTEYDGL----GALIISPTRELAVQIFEVLRKIGRNHVFSAGL-VIGGKSLKEE 177
Query: 500 QRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIV 559
RL ILV TPGR+L H++ +G V L+MLVLDEAD ++D+GF+ V+ +V
Sbjct: 178 ADRLGR--MNILVCTPGRMLQHLDQTAGFDVN--NLQMLVLDEADRIMDMGFQSAVDALV 233
Query: 560 DCLPRRRQSLLFSATMPKEL-----VLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELH 614
+ LP+ RQ++LFSAT K + + ++ Y+ TP ++QS +V P
Sbjct: 234 EHLPKTRQTMLFSATQSKRVSDLARLSLKDPEYVSAHEEAPTATPTNLQQSYIVTPLPEK 293
Query: 615 FQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK--MNVREMYSRKPQLYRDR 672
L ++ ++ K+IVF S+G +Y + M+ +++ ++ R+ Q+ R
Sbjct: 294 LDTLWGFIRTNL----KSKMIVFFSSGKQVRFVYESFKRMQPGISLLHLHGRQKQVGRME 349
Query: 673 ISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGV 732
I+ +F +SK L +DV ARG+D+P V VVQV P D + YIHR+GRT R +G V
Sbjct: 350 ITRKFTSSKYACLFATDVVARGVDFPAVDWVVQVDCPEDADTYIHRVGRTARYESKGRAV 409
Query: 733 LLLAPWEEY-FLDDL--KDLPLDKLQL-----PHLNPEIQLQMDNHMAKIDNNVKEAAYH 784
L L P EE FL L K +P+ K+ + + E+Q Q ++K
Sbjct: 410 LFLDPSEEKGFLSRLEQKKIPITKVNVREGKKTSIKGELQSQCFQSA-----DLKYLGQK 464
Query: 785 AWLGYYNSIREIGRDKTTL----VELANKFAQSIGLQRPPPL-FRKTALKM 830
A++ Y SI + +DK ++L + +A S+GL P + F+K A +M
Sbjct: 465 AFITYVRSIY-VQKDKDVFKFSKMDL-DGYAASLGLPGTPQVKFQKGAEEM 513
>gi|363752775|ref|XP_003646604.1| hypothetical protein Ecym_4775 [Eremothecium cymbalariae
DBVPG#7215]
gi|356890239|gb|AET39787.1| hypothetical protein Ecym_4775 [Eremothecium cymbalariae
DBVPG#7215]
Length = 500
Score = 211 bits (538), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 156/461 (33%), Positives = 247/461 (53%), Gaps = 38/461 (8%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
++FDE G+S T+KA+ G+ MT+VQ T+ + G+D + AKTG+GK++AFL+PAI
Sbjct: 36 EKFDELGLSKQTLKAIEKMGFTTMTQVQAKTIPPLMAGRDVLGAAKTGSGKTLAFLIPAI 95
Query: 439 EAV--LKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHD-GIGVLTLVGGTR 495
E + LK + T V+++ PTRELA QI A L++ H G+ ++GG
Sbjct: 96 EMLHSLKFKPRNGTG------VIVITPTRELALQIFGVARELMEFHSQTFGI--VIGGAN 147
Query: 496 FKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDV 555
+ + +L S +++ATPGRLLDH++N G + LK L++DEAD +L++GF ++
Sbjct: 148 RRQEAEKL-SKGVNLIIATPGRLLDHLQNTKGFIFK--NLKALIIDEADRILEIGFEDEM 204
Query: 556 ENIVDCLPRR-RQSLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSCLV 608
+ I+ LP RQS+LFSAT + + L+ +I+ T ++Q +V
Sbjct: 205 KQIIKILPNEDRQSMLFSATQTTKVEDLARISLRPGPLFINVDSEKETSTVDGLEQGYVV 264
Query: 609 APHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQL 668
+ F +L LK+ K+IVF S+ LL + + V E++ ++ Q
Sbjct: 265 CESDKRFLLLFTFLKKF----QTKKIIVFLSSCNSVRYYAELLNYIDLPVLELHGKQKQQ 320
Query: 669 YRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGK- 727
R EF ++R ILV +DV+ARG+D P V ++Q P D YIHR+GRT R K
Sbjct: 321 KRTNTFFEFCNAQRGILVCTDVAARGLDIPAVDWIIQFDPPDDPRDYIHRVGRTARGTKG 380
Query: 728 EGEGVLLLAPWEEYFLDDLK--DLPLDKLQLPH---LNPEIQLQMDNHMAKIDNNVKEAA 782
+G+ ++ L P E FL LK +PL++ + P N + QL+ N + +
Sbjct: 381 KGKSLMFLTPNELGFLRYLKAAKVPLNEYEFPANKIANVQSQLEKLLKTNYELNRIAKDG 440
Query: 783 YHAWLGYY--NSIREIGR-DKTTLVELANKFAQSIGLQRPP 820
Y ++L Y +S++ + + DK LV K A+S G PP
Sbjct: 441 YRSYLQAYASHSLKTVYQIDKLDLV----KVAKSYGFSVPP 477
>gi|261408394|ref|YP_003244635.1| DEAD/DEAH box helicase domain-containing protein [Paenibacillus sp.
Y412MC10]
gi|329929405|ref|ZP_08283153.1| DEAD-box ATP-dependent RNA helicase CshA [Paenibacillus sp. HGF5]
gi|261284857|gb|ACX66828.1| DEAD/DEAH box helicase domain protein [Paenibacillus sp. Y412MC10]
gi|328936492|gb|EGG32937.1| DEAD-box ATP-dependent RNA helicase CshA [Paenibacillus sp. HGF5]
Length = 533
Score = 211 bits (538), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 142/396 (35%), Positives = 210/396 (53%), Gaps = 31/396 (7%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
K F + G+ P ++A+T G+ + T +Q ++ L GKD + +A+TGTGK+ AF LP I
Sbjct: 2 KNFADFGLEPRVLQAITELGFEEATPIQSQSIPIALTGKDMIGQAQTGTGKTAAFGLPLI 61
Query: 439 EAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
+ K I LI+ PTRELA Q+A E I L GI L + GG
Sbjct: 62 HKIAKEEER--------IVALIMTPTRELAIQVAEE-IGKLSRFKGIRSLAIYGGQDIGR 112
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
R L+ P QI++ TPGRLLDHI K+ +RL ++ +VLDEAD +LD+GF +D+++I
Sbjct: 113 QIRALKRKP-QIIIGTPGRLLDHINRKT---IRLDDVQTVVLDEADEMLDMGFMEDIQSI 168
Query: 559 VDCLPRRRQSLLFSATMP-------KELVLKREHTYIDTVGLGSVETPVKIKQSCLVAPH 611
+ +P RQ+LLFSATMP + + + EH +V V P+ I Q+ + P
Sbjct: 169 LKLVPEERQTLLFSATMPANIQKLASQFLKEPEHV---SVIPKHVSAPL-IDQAYIEVPE 224
Query: 612 ELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRD 671
F+ L LL + +P+ IVF T L L++ + ++ Q RD
Sbjct: 225 RQKFEALSRLLD---MESPEL-AIVFGRTKRRVDELAEALQKRGYSADGLHGDLSQHQRD 280
Query: 672 RISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEG 731
+ +FR +LV +DV+ARG+D VT VV +P D E Y+HR+GRTGR GKEG
Sbjct: 281 TVMRKFRDGSIDVLVATDVAARGLDVSGVTHVVNFDLPQDPESYVHRIGRTGRAGKEGTA 340
Query: 732 VLLLAPWEE---YFLDDLKDLPLDKLQLPHLNPEIQ 764
+ P E YF++ + + + LP + I+
Sbjct: 341 WSFVTPREMDHLYFIERVTRHRIPRKPLPTIAEAIE 376
>gi|327304765|ref|XP_003237074.1| ATP-dependent RNA helicase DBP4 [Trichophyton rubrum CBS 118892]
gi|326460072|gb|EGD85525.1| ATP-dependent RNA helicase DBP4 [Trichophyton rubrum CBS 118892]
Length = 815
Score = 211 bits (538), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 159/498 (31%), Positives = 252/498 (50%), Gaps = 43/498 (8%)
Query: 367 KEKREEEPILSQKR-------------FDECGISPLTIKALTAAGYIQMTRVQEATLSAC 413
K KR E+ I S K+ F + +S T L+A+ + ++T +Q +
Sbjct: 25 KRKRNEDDIASLKQRVAELDTKAAIESFTDLPLSEPTTLGLSASHFKELTDIQSRAIPHA 84
Query: 414 LEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAA 473
L+G+D + AKTG+GK++AFL+P +E + + + L LI+ PTRELA QI
Sbjct: 85 LQGRDILGAAKTGSGKTLAFLVPVLENLFRKQWTEYDGL----GALIISPTRELAIQIF- 139
Query: 474 EAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLM 533
E + + + ++GG + +Q RL ILV TPGR+L H++ +
Sbjct: 140 EVLRKIGRYHTFSAGLIIGGKSLQEEQERLGR--MNILVCTPGRMLQHMDQTAAFDTD-- 195
Query: 534 GLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQSLLFSATMPKEL-----VLKREHTYI 588
++MLVLDEAD ++D+GF+ V+ IV+ LP+ RQ++LFSAT K++ + ++ YI
Sbjct: 196 NIQMLVLDEADRIMDMGFQSTVDAIVEHLPKERQTMLFSATQTKKVSDLARLSLQDPEYI 255
Query: 589 DTVGLGSVETPVKIKQSCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLY 648
S TP ++Q +V P L ++ + K+IVF S+ +Y
Sbjct: 256 SVHQAASSATPSTLQQHYVVTPLPDKLDTLWSFIRSSLKS----KIIVFFSSSKEVRFVY 311
Query: 649 LLLREMK--MNVREMYSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQV 706
R+M+ + + ++ R+ Q R I+ +F ASK L +DV ARG+D+P V V+Q+
Sbjct: 312 EAFRQMQPGIPLLHLHGRQKQGARLDITHKFSASKNSCLFATDVVARGLDFPAVDWVIQL 371
Query: 707 GIPPDREQYIHRLGRTGREGKEGEGVLLLAPWEEY-FLDDL--KDLPLDKLQL-PHLNPE 762
P D + YIHR+GRT R ++G VL L P EE L L K +P++K+ + +
Sbjct: 372 DCPEDSDTYIHRVGRTARYERDGRAVLFLDPSEEVGMLSRLEQKKIPIEKINIRANKQQS 431
Query: 763 IQLQMDNHMAKIDNNVKEAAYHAWLGYYNSIREIGRDKTTLVELA---NKFAQSIGLQRP 819
I+ Q+ N M D +K A+ Y SI I +DK A ++ S+GL
Sbjct: 432 IKHQLQN-MCFKDPQLKYLGQKAFTSYVKSIH-IQKDKEVFDVKALPLEEYTASLGLPGA 489
Query: 820 PPL-FRKTALKMGLKDIP 836
P + F K LK+ P
Sbjct: 490 PRIKFIKGEDTKSLKNAP 507
>gi|303313405|ref|XP_003066714.1| ATP-dependent RNA helicase DBP4, putative [Coccidioides posadasii
C735 delta SOWgp]
gi|240106376|gb|EER24569.1| ATP-dependent RNA helicase DBP4, putative [Coccidioides posadasii
C735 delta SOWgp]
Length = 805
Score = 211 bits (538), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 145/455 (31%), Positives = 235/455 (51%), Gaps = 31/455 (6%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F E +S T++ L+A+ + +T +Q + ++G+D + AKTG+GK++AFL+P +E
Sbjct: 50 FSELPLSDATLQGLSASHFKTLTDIQSRAVPHAIKGRDILGAAKTGSGKTLAFLVPVLEN 109
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+ + + L LIL PTRELA QI E + + + ++GG + +Q
Sbjct: 110 LYRKQWTEYDGL----GALILSPTRELAIQIF-EVLRKIGRYHTFSAGLVIGGKSLQEEQ 164
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
RL ILV TPGR+L H++ + ++MLVLDEAD ++D+GF+ V+ IV+
Sbjct: 165 ERLGR--MNILVCTPGRMLQHMDQTAAFDTD--HIQMLVLDEADRIMDMGFQSTVDAIVE 220
Query: 561 CLPRRRQSLLFSATMPKEL-----VLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHF 615
LP+ RQ++LFSAT K++ + R+ YI S TP ++Q +V P
Sbjct: 221 HLPKERQTMLFSATQTKKVSDLARLSLRDPEYISVHEAASSATPASLQQHYVVTPLPEKL 280
Query: 616 QILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK--MNVREMYSRKPQLYRDRI 673
L ++ T K++VF S+ +Y R M+ + + ++ R+ Q R I
Sbjct: 281 DTLWSFIR----NTLKSKILVFFSSSKQVRFVYEAFRHMQPGIPLLHLHGRQKQSARIDI 336
Query: 674 SEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVL 733
+ +F +K L ++DV+ARG+D+P V V+Q+ P D + YIHR+GRT R ++G VL
Sbjct: 337 TSKFSRAKYSCLFSTDVAARGLDFPAVDWVIQLDCPEDADTYIHRVGRTARYERDGRAVL 396
Query: 734 LLAPWEEYFLDDLKDLPLDKLQLPHLNPEIQLQMD-----NHMAKIDNNVKEAAYHAWLG 788
L P EE + LK L K+ + +N + + Q +M D +K A+
Sbjct: 397 FLDPSEEEGM--LKRLEQKKIPIERINIKAKKQQSIVNQLQNMCFKDPALKYLGQKAFTS 454
Query: 789 YYNSIREIGRDKTTLVELA---NKFAQSIGLQRPP 820
Y S+ I +DK + +FA S+GL P
Sbjct: 455 YVKSVH-IQKDKDVFNVKSLPLEEFASSLGLPGAP 488
>gi|336422222|ref|ZP_08602374.1| hypothetical protein HMPREF0993_01751 [Lachnospiraceae bacterium
5_1_57FAA]
gi|336009132|gb|EGN39130.1| hypothetical protein HMPREF0993_01751 [Lachnospiraceae bacterium
5_1_57FAA]
Length = 526
Score = 211 bits (538), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 140/412 (33%), Positives = 222/412 (53%), Gaps = 24/412 (5%)
Query: 376 LSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLL 435
+ + RF++ G+ P +KA+ G+ + + +Q + A LEGKD + +A+TGTGK+ AF +
Sbjct: 1 MEEARFEDLGLCPEIMKAVKNMGFEEASPIQAKAIPAMLEGKDIIGQAQTGTGKTAAFGI 60
Query: 436 PAIEAV-LKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGT 494
P +E + LK + ++LCPTRELA Q+A E L K I VL + GG
Sbjct: 61 PLLEKIDLKNKK---------LQAIVLCPTRELAIQVAEEIRNLAKYMHAIKVLPIYGGQ 111
Query: 495 RFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKD 554
R L+S Q+++ TPGR++DH+ K+ V++ + +VLDEAD +L++GFR+D
Sbjct: 112 EIVKQIRSLKSG-TQLIIGTPGRVMDHMRRKT---VKMENVHTVVLDEADEMLNMGFRED 167
Query: 555 VENIVDCLPRRRQSLLFSATMPKEL--VLKREHTYIDTVGLGSVETPV-KIKQSCLVAPH 611
+E I++ +P RQ++LFSATMPK + + KR + + + E V I+Q
Sbjct: 168 IETILEGVPEERQTVLFSATMPKPILDITKRFQKNAELIKVTKKELTVPNIEQFYYEVKP 227
Query: 612 ELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRD 671
+ ++L LL + P VI FC+T LL L ++ Q RD
Sbjct: 228 KNKEEVLSRLLDIY---NPKLSVI-FCNTKKQVDLLVNGLLGRGYFAAGLHGDMKQAQRD 283
Query: 672 RISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEG 731
R+ + FR K ILV +DV+ARG+D +V +V +P D E Y+HR+GRTGR G+ G
Sbjct: 284 RVMDGFRKGKTEILVATDVAARGIDVEEVEAVFNYDLPQDDEYYVHRIGRTGRAGRVGRS 343
Query: 732 VLLLAPWEEYFLDDLKDLPLDKL---QLPHLNPEIQLQMDNHMAKIDNNVKE 780
+ E Y L +++ K+ ++P L+ +MD M I+ ++E
Sbjct: 344 FSFVTGKEVYKLKEIQRYCKTKIYAQKVPSLDDVANTKMDKLMETINRIIEE 395
>gi|381197939|ref|ZP_09905278.1| ATP-dependent RNA helicase [Acinetobacter lwoffii WJ10621]
Length = 640
Score = 211 bits (537), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 129/382 (33%), Positives = 205/382 (53%), Gaps = 22/382 (5%)
Query: 392 KALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATS----S 447
+AL + G+ T VQE ++ A LEGKD +V ++TG+GK+ AFLLP + A+ +
Sbjct: 16 QALQSLGFTSPTPVQEQSIPAALEGKDLLVSSQTGSGKTAAFLLPTLNALAAQETFVPFK 75
Query: 448 STTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDP 507
+ + +L+LCPTRELA Q++ +AI +++ G + ++GG F ++L+
Sbjct: 76 ERMKAITQPNILVLCPTRELAQQVSQDAIGFVRHMKGARIAAIMGGMPFGKQIQQLKG-- 133
Query: 508 CQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQ 567
Q++VATPGRLLD + + ++L + L++DEAD +LDLGF +D+E I D R+Q
Sbjct: 134 AQVVVATPGRLLDLVNRRQ---IKLDQVDALIVDEADRMLDLGFSEDLEAISDLAANRKQ 190
Query: 568 SLLFSATMPKELVLKREHTYIDTVGLGSVETPVKIKQSCLVAPH-----ELHFQILHHLL 622
+L+FSAT ++ E D + ++ET H E ++L H L
Sbjct: 191 TLMFSATFAGRIITLAERMMNDPQRI-AIETGHSTNTDITQTLHWTDGFEHKKKLLTHWL 249
Query: 623 KEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEFRASKR 682
L + +VF ST T +L L E ++V ++ PQ R+R R +
Sbjct: 250 SAEDLD----QAVVFASTQEDTDMLAEELAEAGLSVVALHGAMPQTVRNRRLRSIREGRA 305
Query: 683 LILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLAPWEE-- 740
ILV +DV+ARG+D P ++ V+ G+P E Y+HR+GRTGR G+ G+ + L E
Sbjct: 306 KILVATDVAARGLDVPTISHVINFGLPMKNEDYVHRIGRTGRAGRTGKAITLATYRERGK 365
Query: 741 -YFLDDLKDLPLDKLQLPHLNP 761
L+D D L+ ++ L P
Sbjct: 366 IRALEDFLDARLNVSEIEGLEP 387
>gi|311112058|ref|YP_003983280.1| ATP-dependent RNA helicase DeaD [Rothia dentocariosa ATCC 17931]
gi|310943552|gb|ADP39846.1| ATP-dependent RNA helicase DeaD [Rothia dentocariosa ATCC 17931]
Length = 695
Score = 211 bits (537), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 138/385 (35%), Positives = 206/385 (53%), Gaps = 17/385 (4%)
Query: 380 RFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIE 439
RF + G+ P + AL GY + + +QE T+ L+GKD V A+TGTGK+ AF LPA+
Sbjct: 105 RFTDLGLDPRVLSALEEVGYEKPSPIQEQTIPLLLDGKDVVGLAQTGTGKTAAFALPALS 164
Query: 440 AVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNH-DGIGVLTLVGGTRFKV 498
+ A + + VL+L PTRELA Q+A EA + H + VL + GG+ +
Sbjct: 165 RM--AELADINGVSRDTQVLVLAPTRELALQVA-EAFSSYATHMEDFTVLPIYGGSPYGP 221
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
L Q++V TPGR++DH+E S + L L+ LVLDEAD +L +GF +DVE I
Sbjct: 222 QLAGLRRG-AQVVVGTPGRVIDHLEKGS---LDLSNLQYLVLDEADEMLRMGFAEDVETI 277
Query: 559 VDCLPRRRQSLLFSATMPKELVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQIL 618
++ P +Q LFSATMP + K Y++ E VK K + + + Q++
Sbjct: 278 LEGTPDAKQVALFSATMPNS-IRKIAQQYLND----PTEVRVKTKTTTGANIRQRYMQVM 332
Query: 619 H-HLLKE--HILGTPDYK-VIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRIS 674
H H L +L +Y +IVF T T + L+ + PQ R+R
Sbjct: 333 HSHKLDAMTRVLEVENYDGIIVFVRTKKETEEVADKLKARGFQAAAINGDIPQQLRERTV 392
Query: 675 EEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLL 734
+ R + ILV +DV+ARG+D ++ VV IP D E Y+HR+GRTGR G++GE +L
Sbjct: 393 DALRDGRIDILVATDVAARGLDVERISLVVNYDIPHDTESYVHRIGRTGRAGRDGEAILF 452
Query: 735 LAPWEEYFLDDLKDLPLDKLQLPHL 759
+ P E+Y L ++ K++ H+
Sbjct: 453 VTPREKYMLRQIEKATRQKVEPMHM 477
>gi|452993077|emb|CCQ95421.1| DEAD/DEAH box helicase domain protein [Clostridium ultunense Esp]
Length = 569
Score = 211 bits (537), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 148/444 (33%), Positives = 233/444 (52%), Gaps = 27/444 (6%)
Query: 358 NKLNGNGEKKEKREEEPILSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGK 417
NKL+ K++++ ++++ +F++ +S KA++ G+ +M+ +Q + LEG
Sbjct: 28 NKLD-----KKRKDVVKLMNKLKFEDIKLSEEIQKAVSDMGFEEMSPIQSQAIPKLLEGI 82
Query: 418 DAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIA 477
D + +A+TGTGK+ AF +P IE S + ++LCPTREL+ Q+A E
Sbjct: 83 DIIGQAQTGTGKTAAFGIPIIEKCNGKDRS--------LQAMVLCPTRELSIQVAEEIRR 134
Query: 478 LLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKM 537
L K I VL + GG + L+ QI+V TPGR++DHI K+ ++L ++M
Sbjct: 135 LAKYKRDIFVLPIYGGQPIDRQIKALKKG-VQIVVGTPGRIIDHIRRKT---LKLGSIRM 190
Query: 538 LVLDEADHLLDLGFRKDVENIVDCLPRRRQSLLFSATMPKELV--LKREHTYIDTVGLGS 595
LVLDEAD + D+GFR D+E IV+ +P RQ++ FSATMPKE+V KR T T+ +
Sbjct: 191 LVLDEADEMFDMGFRDDIELIVNHMPEERQTIFFSATMPKEIVDFAKRYQTNPKTIKVVH 250
Query: 596 VETPV-KIKQSCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREM 654
E V +++Q + +IL L+ + P IVFC+T L + L+
Sbjct: 251 KELTVPRVEQYYFELKEHMKTEILSRLID---IYNPKLS-IVFCNTKKKVDELTIELQGR 306
Query: 655 KMNVREMYSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQ 714
V ++ Q RDR+ +FR ILV +DV+ARG+D DV V IP D E
Sbjct: 307 GYFVDGLHGDLKQSQRDRVMSKFRTGNIDILVATDVAARGLDVDDVDIVFNYDIPQDEEY 366
Query: 715 YIHRLGRTGREGKEGEGVLLLAPWEEYFLDDLKDLPLDKL---QLPHLNPEIQLQMDNHM 771
Y+HR+GRT R G+EG + + + + + D++ K+ LP L + Q D +
Sbjct: 367 YVHRIGRTARAGREGIALSFVVGRDRHRIKDIERYTKTKIVRKDLPTLKDMEERQSDILI 426
Query: 772 AKIDNNVKEAAYHAWLGYYNSIRE 795
KI + + + + N I E
Sbjct: 427 EKIKDEIDKGQLDRYEKMLNQILE 450
>gi|317472067|ref|ZP_07931399.1| DEAD/DEAH box helicase [Anaerostipes sp. 3_2_56FAA]
gi|316900471|gb|EFV22453.1| DEAD/DEAH box helicase [Anaerostipes sp. 3_2_56FAA]
Length = 528
Score = 211 bits (537), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 148/437 (33%), Positives = 230/437 (52%), Gaps = 24/437 (5%)
Query: 380 RFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIE 439
RFDE I+ +KA+ G+ + +Q A + LEG+D V +A+TGTGK+ AF +P +E
Sbjct: 5 RFDELNINDKILKAVKEMGFEAASPIQGAAIPVVLEGRDIVGQAQTGTGKTAAFGIPLLE 64
Query: 440 AVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVD 499
+ T++ P +ILCPTRELA Q+A E L K G VL + GG
Sbjct: 65 KM-------DTKVKRP-QAMILCPTRELAIQVADEIRKLAKFMHGAKVLPIYGGQNITNQ 116
Query: 500 QRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIV 559
R L++ I+V TPGR++DH+ + ++L LKM+VLDEAD +L++GFR+D+E+I+
Sbjct: 117 IRSLKTG-ANIIVGTPGRIMDHMRRHT---LKLEDLKMVVLDEADEMLNMGFREDIESIL 172
Query: 560 DCLPRRRQSLLFSATMPKELVLKREHTYIDTVGLGSVE---TPVKIKQSCLVAPHELHFQ 616
+P RQ+LLFSATMPK ++ + D+ + V T I+Q + +
Sbjct: 173 KEVPEERQTLLFSATMPKAILDITKKYQKDSKLIKVVRKELTVPNIEQYYYEVRPKQKVE 232
Query: 617 ILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEE 676
+L LL H +P IVFC+T + + L+ ++ Q RDR+ +
Sbjct: 233 VLCRLLDMH---SPKLS-IVFCNTKRMVDEVTGELKGRGYFAEGIHGDLKQSQRDRVMKS 288
Query: 677 FRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLA 736
FR + ILV +DV+ARG+D DV +V +P D E Y+HR+GRTGR G+ G +A
Sbjct: 289 FRGGRVDILVATDVAARGIDVDDVDAVFNYDLPQDDEFYVHRIGRTGRAGRTGNAFTFVA 348
Query: 737 PWEEYFLDDLKDLPLDKLQ---LPHLNPEIQLQMDNHMAKIDNNVKEAAYHAWLGYYNSI 793
E Y L D++ K++ +P LN + + + +I ++E ++ +
Sbjct: 349 GKEIYKLRDVQRYCKTKIKARPIPSLNDVQATRAEKSLEEITGLIEENNLDKYVDMLDEF 408
Query: 794 REIGRDKTTLVELANKF 810
I T +E+A F
Sbjct: 409 --INETDFTALEIAAAF 423
>gi|26337015|dbj|BAC32191.1| unnamed protein product [Mus musculus]
Length = 462
Score = 211 bits (537), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 138/408 (33%), Positives = 225/408 (55%), Gaps = 30/408 (7%)
Query: 380 RFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIE 439
RF + +S T+K L A Y +T +Q+ T+ L+GKD + AKTG+GK++AFL+P +E
Sbjct: 70 RFSDFPLSKKTLKGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLE 129
Query: 440 AVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVD 499
A+ + +ST L VLI+ PTRELA Q + KNHD L ++GG K +
Sbjct: 130 ALYRLQWTSTDGL----GVLIISPTRELAYQTFEVLRKVGKNHDFSAGL-IIGGKDLKHE 184
Query: 500 QRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIV 559
R+ + ILV TPGRLL H++ + L+MLVLDEAD +LD+GF + I+
Sbjct: 185 AERINN--INILVCTPGRLLQHMDET--ICFHATNLQMLVLDEADRILDMGFADTMNAII 240
Query: 560 DCLPRRRQSLLFSATMPKEL-----VLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELH 614
+ LP++RQ+LLFSAT K + + ++ Y+ TP ++Q+ ++
Sbjct: 241 ENLPKKRQTLLFSATQTKSVKDLARLSLKDPEYVWVHEKAKYSTPATLEQNYIICELHQK 300
Query: 615 FQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK--MNVREMYSRKPQLYRDR 672
+L L+ H+ K IVF S+ LY + ++ +++ ++ R+ Q+ R
Sbjct: 301 ISVLFSFLRSHL----KKKSIVFFSSCKEVQYLYRVFCRLRPGISILALHGRQQQMRRME 356
Query: 673 ISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGV 732
+ EF + +L +D++ARG+D+P V V+Q P D YIHR GRT R ++GE +
Sbjct: 357 VYNEFVRKRAAVLFATDIAARGLDFPAVNWVLQFDCPEDANTYIHRAGRTARYKEDGEAL 416
Query: 733 LLLAPWEEY-FLDDL--KDLPLDKLQLPHLNPE----IQLQMDNHMAK 773
L+L P EE + L K +P+ +++ +NPE +Q ++++ +A+
Sbjct: 417 LILLPSEEQGMVQQLLQKKVPVKEIK---INPEKLIDVQKKLESFLAQ 461
>gi|354474537|ref|XP_003499487.1| PREDICTED: ATP-dependent RNA helicase DDX18 [Cricetulus griseus]
Length = 656
Score = 211 bits (537), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 156/451 (34%), Positives = 242/451 (53%), Gaps = 41/451 (9%)
Query: 390 TIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSST 449
T+KA+ G+ +MT +Q ++ LEG+D + AKTG+GK++AFL+P IE ++K
Sbjct: 176 TLKAIEEMGFKRMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPVIELIVK------ 229
Query: 450 TQLVP--PIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDP 507
+ +P VLIL PTRELA Q L+ +H L + G R Q+ +
Sbjct: 230 LKFMPRNGTGVLILSPTRELAMQTFGVLKELMTHHVHTYGLIMGGSNRSAEAQKLING-- 287
Query: 508 CQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQ 567
I+VATPGRLLDH++N G + L+ LV+DEAD +LD+GF ++++ I+ LP RRQ
Sbjct: 288 INIIVATPGRLLDHMQNTPGFMYK--NLQCLVIDEADRILDVGFEEELKQIIKLLPVRRQ 345
Query: 568 SLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILHHL 621
++LFSAT ++ + LK+E Y+ V T ++Q +V P E F +L
Sbjct: 346 TMLFSATQTRKVEDLARISLKKEPLYVGVDDDKEVATVDGLEQGYVVCPSEKRFLLLFTF 405
Query: 622 LKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEFRASK 681
LK++ KV+VF S+ M Y LL + + V ++ ++ Q R +F +
Sbjct: 406 LKKN----RKKKVMVFFSSCMSVKYHYELLNYIDLPVLAIHGKQKQNKRTTTFFQFCNAD 461
Query: 682 RLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEG--VLLLAPWE 739
IL+ +DV+ARG+D P+V +VQ P D ++YIHR+GRT R G G G +L+L P E
Sbjct: 462 SGILLCTDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTAR-GLNGRGHALLILRPEE 520
Query: 740 EYFLDDLKD--LPLDKLQLPHLN-PEIQLQMDNHMAKIDNNVKEAAYHAWLGYYNSIREI 796
FL LK +PL++ +IQ Q++ + K + + ++A A+ Y IR
Sbjct: 521 LGFLRYLKQSKVPLNQFDFSWSKVSDIQSQLEKLIEK-NYFLHKSAQEAYKSY---IR-- 574
Query: 797 GRDKTTLVELAN-------KFAQSIGLQRPP 820
D +L ++ N + A S G + PP
Sbjct: 575 AYDSHSLKQIFNVNNLNLPQVALSFGFKVPP 605
>gi|330947845|ref|XP_003306982.1| hypothetical protein PTT_20301 [Pyrenophora teres f. teres 0-1]
gi|311315216|gb|EFQ84920.1| hypothetical protein PTT_20301 [Pyrenophora teres f. teres 0-1]
Length = 808
Score = 211 bits (537), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 152/465 (32%), Positives = 242/465 (52%), Gaps = 41/465 (8%)
Query: 377 SQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLP 436
S K F + +S T + L ++ + MT VQ ++ L+G D + AKTG+GK+++F++P
Sbjct: 47 SYKDFTDLPLSDPTKQGLKSSHFAVMTDVQAKSIPLALQGHDILGAAKTGSGKTLSFIIP 106
Query: 437 AIEAVLKATSSSTTQLVPP---IYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGG 493
+E + + Q + P + LIL PTRELA QI + ++ L+GG
Sbjct: 107 VLENLYR------LQHIGPDAGLGALILSPTRELAIQIFDVLRKIGRHGHMFAAGLLIGG 160
Query: 494 TRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRK 553
K ++ L ILVATPGR+L H+ + SV LK+LVLDEAD +LD+GF++
Sbjct: 161 KSLKDEREALTK--MNILVATPGRMLQHLSQTAAFSVD--DLKILVLDEADRILDMGFQR 216
Query: 554 DVENIVDCLPRRRQSLLFSATMPKEL-----VLKREHTYIDTVGLGSVETPVKIKQSCLV 608
DV+ IV+ LP+ RQ+LLFSAT K++ + ++ Y+ TP + Q+ ++
Sbjct: 217 DVDAIVEYLPKERQTLLFSATQSKKVSDLARLSLQDPEYVSVHAEDKSATPKGLTQNYII 276
Query: 609 APHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK--MNVREMYSRKP 666
P E L ++ + K++ F S+ +Y R M+ + + ++ R+
Sbjct: 277 CPQEEKLDTLWSFIQ----ASKKSKILCFFSSAKTVRFVYESFRHMQPGIPLLHIHGRQK 332
Query: 667 QLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREG 726
Q R + +F A+K L +DV+ARG+D+P V V+QV P D + YIHR+GRT R
Sbjct: 333 QGARLDTTAKFSAAKHSCLFATDVAARGLDFPAVDFVIQVDCPDDVDTYIHRVGRTARYN 392
Query: 727 KEGEGVLLLAPWEEYFLDDLKDLPLDKLQLPHLN------PEIQLQMDNHMAKIDNNVKE 780
+EG GVL LAP EE + LK L ++ + +N I+ Q+ N M D +K
Sbjct: 393 REGRGVLFLAPSEEEGM--LKRLEAKRVPVEAINVRQKKRQSIKDQLQN-MCFQDPALKY 449
Query: 781 AAYHAWLGYYNSI-----REIGRDKTTLVELANKFAQSIGLQRPP 820
A++ + SI +E+ + K +E +A S+GL P
Sbjct: 450 LGQKAFMTHVKSIYLQKDKEVFKLKEYNLE---AYAASLGLPGTP 491
>gi|326914387|ref|XP_003203507.1| PREDICTED: probable ATP-dependent RNA helicase DDX10-like, partial
[Meleagris gallopavo]
Length = 658
Score = 211 bits (537), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 148/460 (32%), Positives = 248/460 (53%), Gaps = 37/460 (8%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
+RF + +S T+K L A Y +T +Q T+ L+GKD + AKTG+GK++AF++PA+
Sbjct: 73 QRFSDFPLSKKTLKGLQEAQYRMVTEIQRQTIGLALQGKDVLGAAKTGSGKTLAFIVPAL 132
Query: 439 EAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
E + + +S L VLI+ PTRELA Q + KNHD L ++GG K
Sbjct: 133 ELLYRLQWTSADGL----GVLIISPTRELAFQTFKVLRKVGKNHDFSAGL-IIGGKDLKE 187
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
+ R+ +L+ TPGRLL H++ S L+ML+LDEAD +LD+GF + I
Sbjct: 188 ESERIHH--INMLICTPGRLLQHMDETSYFYAS--DLQMLILDEADRILDMGFADTMNAI 243
Query: 559 VDCLPRRRQSLLFSATMPKEL-----VLKREHTYIDTVGLGSVETPVKIKQSCLVAPHEL 613
++ LP++RQ+LLFSAT K + + ++ Y+ TP + Q+ +V +
Sbjct: 244 IENLPKKRQTLLFSATQTKSVKDLARLSLKDPEYVWVHEKAKFSTPATLDQNYIVCELQH 303
Query: 614 HFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK--MNVREMYSRKPQLYRD 671
+L+ L+ H+ K IVF ++ L+ + +++ + V ++ ++ Q+ R
Sbjct: 304 KINVLYSFLRSHL----KKKSIVFFASCKEVQYLFRVFCKLQPGLPVLALHGKQQQMKRM 359
Query: 672 RISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEG 731
+ F K +L +D++ARG+D+P V V+Q P D YIHR+GRT R + GE
Sbjct: 360 EVYTCFVRKKAAVLFATDIAARGLDFPAVNWVIQFDCPEDANTYIHRVGRTARYKEGGEA 419
Query: 732 VLLLAPWEEY-FLDDL--KDLPLDKLQLPHLNPE----IQLQMDNHMAKIDNNVKEAAYH 784
+L+L P EE ++ L + +P+++++ +NPE IQ +M +A+ D +KE A
Sbjct: 420 LLVLLPSEEKGMVEQLAQRKVPVNEIK---INPEKITDIQKRMQAFLAQ-DQELKEKAQR 475
Query: 785 AWLGYYNSIREIGRDKTTL----VELANKFAQSIGLQRPP 820
++ Y S+ + ++K + LA ++A S+GL P
Sbjct: 476 CFVSYLRSVY-LMKNKEVFDVFKLPLA-EYALSLGLAMAP 513
>gi|167757993|ref|ZP_02430120.1| hypothetical protein CLOSCI_00330 [Clostridium scindens ATCC 35704]
gi|167664425|gb|EDS08555.1| DEAD/DEAH box helicase [Clostridium scindens ATCC 35704]
Length = 526
Score = 211 bits (537), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 138/411 (33%), Positives = 220/411 (53%), Gaps = 22/411 (5%)
Query: 376 LSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLL 435
+ + RF++ G+ P +KA+ G+ + + +Q + A LEGKD + +A+TGTGK+ AF +
Sbjct: 1 MEEARFEDLGLCPEIMKAVKNMGFEEASPIQAKAIPAMLEGKDIIGQAQTGTGKTAAFGI 60
Query: 436 PAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTR 495
P +E + + ++LCPTRELA Q+A E L K I VL + GG
Sbjct: 61 PLLEKIDPKNKK--------LQAIVLCPTRELAIQVAEEIRNLAKYMHAIKVLPIYGGQE 112
Query: 496 FKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDV 555
R L+S Q+++ TPGR++DH+ K+ V++ + +VLDEAD +L++GFR+D+
Sbjct: 113 IVKQIRSLKSG-TQLIIGTPGRVMDHMRRKT---VKMENVHTVVLDEADEMLNMGFREDI 168
Query: 556 ENIVDCLPRRRQSLLFSATMPKEL--VLKREHTYIDTVGLGSVETPV-KIKQSCLVAPHE 612
E I++ +P RQ++LFSATMPK + + KR + + + E V I+Q +
Sbjct: 169 ETILEGVPEERQTVLFSATMPKPILDITKRFQKNAELIKVTKKELTVPNIEQFYYEVKPK 228
Query: 613 LHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDR 672
++L LL + P VI FC+T LL L ++ Q RDR
Sbjct: 229 NKEEVLSRLLDIY---NPKLSVI-FCNTKKQVDLLVNGLLGRGYFAAGLHGDMKQAQRDR 284
Query: 673 ISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGV 732
+ + FR K ILV +DV+ARG+D +V +V +P D E Y+HR+GRTGR G+ G
Sbjct: 285 VMDGFRKGKTEILVATDVAARGIDVEEVEAVFNYDLPQDDEYYVHRIGRTGRAGRVGRSF 344
Query: 733 LLLAPWEEYFLDDLKDLPLDKL---QLPHLNPEIQLQMDNHMAKIDNNVKE 780
+ E Y L +++ K+ ++P L+ +MD M I+ ++E
Sbjct: 345 SFVTGKEVYKLKEIQRYCKTKIYAQKVPSLDDVANTKMDKLMETINRIIEE 395
>gi|320036344|gb|EFW18283.1| ATP-dependent RNA helicase dbp4 [Coccidioides posadasii str.
Silveira]
Length = 805
Score = 211 bits (537), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 145/455 (31%), Positives = 235/455 (51%), Gaps = 31/455 (6%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F E +S T++ L+A+ + +T +Q + ++G+D + AKTG+GK++AFL+P +E
Sbjct: 50 FSELPLSDATLQGLSASHFKTLTDIQSRAVPHAIKGRDILGAAKTGSGKTLAFLVPVLEN 109
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+ + + L LIL PTRELA QI E + + + ++GG + +Q
Sbjct: 110 LYRKQWTEYDGL----GALILSPTRELAIQIF-EVLRKIGRYHTFSAGLVIGGKSLQEEQ 164
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
RL ILV TPGR+L H++ + ++MLVLDEAD ++D+GF+ V+ IV+
Sbjct: 165 ERLGR--MNILVCTPGRMLQHMDQTAAFDTD--HIQMLVLDEADRIMDMGFQSTVDAIVE 220
Query: 561 CLPRRRQSLLFSATMPKEL-----VLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHF 615
LP+ RQ++LFSAT K++ + R+ YI S TP ++Q +V P
Sbjct: 221 HLPKERQTMLFSATQTKKVSDLARLSLRDPEYISVHEAASSATPASLQQHYVVTPLPEKL 280
Query: 616 QILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK--MNVREMYSRKPQLYRDRI 673
L ++ T K++VF S+ +Y R M+ + + ++ R+ Q R I
Sbjct: 281 DTLWSFIR----NTLKSKILVFFSSSKQVRFVYEAFRHMQPGIPLLHLHGRQKQSARIDI 336
Query: 674 SEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVL 733
+ +F +K L ++DV+ARG+D+P V V+Q+ P D + YIHR+GRT R ++G VL
Sbjct: 337 TSKFSRAKYSCLFSTDVAARGLDFPAVDWVIQLDCPEDADTYIHRVGRTARYERDGRAVL 396
Query: 734 LLAPWEEYFLDDLKDLPLDKLQLPHLNPEIQLQMD-----NHMAKIDNNVKEAAYHAWLG 788
L P EE + LK L K+ + +N + + Q +M D +K A+
Sbjct: 397 FLDPSEEEGM--LKRLEQKKIPIERINIKAKKQQSIVNQLQNMCFKDPALKYLGQKAFTS 454
Query: 789 YYNSIREIGRDKTTLVELA---NKFAQSIGLQRPP 820
Y S+ I +DK + +FA S+GL P
Sbjct: 455 YVKSVH-IQKDKDVFNVKSLPLEEFASSLGLPGAP 488
>gi|225028959|ref|ZP_03718151.1| hypothetical protein EUBHAL_03251 [Eubacterium hallii DSM 3353]
gi|224953734|gb|EEG34943.1| DEAD/DEAH box helicase [Eubacterium hallii DSM 3353]
Length = 529
Score = 211 bits (537), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 137/425 (32%), Positives = 224/425 (52%), Gaps = 44/425 (10%)
Query: 380 RFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIE 439
+F E I P +KA+ G+ M+ +Q + L GKD + +A+TGTGK+ AF +P ++
Sbjct: 5 KFTELDIKPEILKAVANMGFEAMSPIQAKAIPVELSGKDVIGQAQTGTGKTAAFGIPILQ 64
Query: 440 AVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVD 499
V +L P ++LCPTRELA Q+A E L K + +L + GG
Sbjct: 65 KV-------DPKLKKP-QAIVLCPTRELAIQVADEIRKLAKYMSSVKILPIYGGQEISKQ 116
Query: 500 QRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIV 559
R L++ QI++ TPGR++DH+ K+ V+ + +VLDEAD +LD+GFR+D+E I+
Sbjct: 117 IRSLKAG-VQIIIGTPGRMMDHMRRKT---VKFDNIHTVVLDEADEMLDMGFREDIETIL 172
Query: 560 DCLPRRRQSLLFSATMPKELV-LKREHTYIDTVGLGSVETP--VKIKQSCLVAPHELHF- 615
+ +P RQ++LFSATMPK ++ L R + + P +K+ + L P+ +
Sbjct: 173 NGVPEERQTMLFSATMPKPIMELARAYQ----------QNPEIIKVIRKELTVPNITQYY 222
Query: 616 ---------QILHHLLKEHILGTPDYKV-IVFCSTGMVTSLLYLLLREMKMNVREMYSRK 665
++L LL + D K+ +VFC+T L L+ ++
Sbjct: 223 YEVRPKNKSEVLSRLLDIY-----DPKLSVVFCNTKKGVDELVADLKGRGYFAEGLHGDM 277
Query: 666 PQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGRE 725
Q RDR+ FR+ K ILV +DV+ARG+D DV +V +P D E Y+HR+GRTGR
Sbjct: 278 KQTMRDRVMHRFRSGKTDILVATDVAARGIDVDDVDAVFNYDLPQDEEYYVHRIGRTGRA 337
Query: 726 GKEGEGVLLLAPWEEYFLDDLKDLPLDKLQ---LPHLNPEIQLQMDNHMAKIDNNVKEAA 782
G+ G + E Y L D++ K++ +P LN + +++ +ID+ +++
Sbjct: 338 GRTGMAFSFVVGREVYKLKDIRRYCKAKIKAQPIPSLNDVTETRVEKIFDRIDHYIEDQN 397
Query: 783 YHAWL 787
+ ++
Sbjct: 398 LNKYI 402
>gi|170050080|ref|XP_001859201.1| DEAD box ATP-dependent RNA helicase [Culex quinquefasciatus]
gi|167871660|gb|EDS35043.1| DEAD box ATP-dependent RNA helicase [Culex quinquefasciatus]
Length = 600
Score = 211 bits (537), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 149/468 (31%), Positives = 244/468 (52%), Gaps = 39/468 (8%)
Query: 373 EPILSQKRFDECG--ISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKS 430
E +L + F+ +S T+KA+T G+ +MT +Q + L G+D + AKTG+GK+
Sbjct: 99 EVLLGSQEFESLKGKVSDNTLKAITEMGFTKMTEIQAKAIPPLLAGRDLIGSAKTGSGKT 158
Query: 431 IAFLLPAIEAVLKATSSSTTQLVP--PIYVLILCPTRELASQIAAEAIALLKNHDGIGVL 488
+AFL+PA+E + K Q P VL++ PTRELA QI + L H
Sbjct: 159 LAFLIPAVELIYK------LQFKPRNGTGVLVISPTRELAMQIFG-VLKELSAHHHYTYG 211
Query: 489 TLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLD 548
L+GG + +L S I+VATPGRLLDH++ + L+ L++DE D +L+
Sbjct: 212 LLMGGASRHTENEKL-SKGLNIIVATPGRLLDHLKGTPNFLFK--NLQCLIIDECDRILE 268
Query: 549 LGFRKDVENIVDCLPRRRQSLLFSATMPK------ELVLKREHTYIDTVGLGSVETPVKI 602
+GF +D++ I+ LP++RQ++LFSAT +L LK E Y+ + T +
Sbjct: 269 IGFEEDMKQIISILPKKRQTMLFSATQTSRTEELGKLALKSEPIYVGVDDNKTEATVSGL 328
Query: 603 KQSCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMY 662
+Q +V P E +L LK++ KV+VF S+ + + L + + V ++
Sbjct: 329 EQGYIVCPSEKRLLVLFTFLKKN----RKKKVMVFFSSCLSVKFHHELFNYIDLPVNSIH 384
Query: 663 SRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRT 722
++ Q R + +F ++ IL+ +DV+ARG+D P V +VQ P D ++YIHR+GRT
Sbjct: 385 GKQKQAKRTSVFFQFCNAESGILLCTDVAARGLDIPAVDWIVQYDPPNDTKEYIHRVGRT 444
Query: 723 GR-EGKEGEGVLLLAPWEEYFLDDLKD--LPLDKLQLP-HLNPEIQLQMDNHMAK--IDN 776
R + G +LLL P E FL LK +PL++ + + +IQLQ++ +AK N
Sbjct: 445 ARGDNLCGHALLLLRPEEVAFLKYLKQAKVPLNEFEFSWNKIADIQLQLETLLAKNYFLN 504
Query: 777 NVKEAAYHAWLGYYNSIREIGRDKTTLVELAN----KFAQSIGLQRPP 820
+ A+ +++ Y G + + N + A++ G +PP
Sbjct: 505 QSGKLAFKSYVRAYE-----GHHMKDVFNVGNLDLLQVARNFGFTQPP 547
>gi|405969333|gb|EKC34309.1| ATP-dependent RNA helicase DDX18 [Crassostrea gigas]
Length = 578
Score = 211 bits (536), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 158/451 (35%), Positives = 245/451 (54%), Gaps = 33/451 (7%)
Query: 386 ISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAV--LK 443
IS L++K + G+I MT +Q T+ LEG+D + AKTG+GK++AFLLPA+E + LK
Sbjct: 65 ISDLSLKGIADMGFIHMTEIQANTIPHLLEGRDLMGAAKTGSGKTLAFLLPAVELLNKLK 124
Query: 444 ATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRL 503
+ T + I+ PTREL+ Q LLK H L ++GGT +V++ +
Sbjct: 125 FMPRNGTGCI------IISPTRELSMQTFGVLKELLKYHCHTYGL-IMGGTS-RVEEAKK 176
Query: 504 ESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLP 563
ILVATPGRLLDH++N + L+ L++DEAD +L++GF ++++ I+ LP
Sbjct: 177 LGKGINILVATPGRLLDHLQNTPNFMYK--NLQCLIIDEADRILEIGFEEEMKQIMKLLP 234
Query: 564 RRRQSLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQI 617
+RRQ++LFSAT ++ + LK+E YI T ++Q +V P + F +
Sbjct: 235 KRRQTMLFSATQTRKVEDLSRISLKKEPLYIGVDDRKDSATVEGLEQGYVVCPSDKRFLL 294
Query: 618 LHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEF 677
L LK++ KV+VF S+ M + LL + + V ++ ++ Q R + +F
Sbjct: 295 LFTFLKKN----RKKKVMVFFSSCMAVKFYHELLNYIDIPVMCIHGKQKQTKRTQTFFQF 350
Query: 678 RASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGR-EGKEGEGVLLLA 736
SK IL+ +DV+ARG+D P V +VQ P D ++YIHR+GRT R EG G +L+L
Sbjct: 351 CNSKESILLCTDVAARGLDIPRVDWIVQYDPPDDPKEYIHRVGRTARGEGGVGHALLILR 410
Query: 737 PWEEYFLDDLKD--LPLDKLQLPHLN-PEIQLQMDNHMAK--IDNNVKEAAYHAWLGYY- 790
P E FL LK +PL++ IQ Q++ + K + + AY +++ +
Sbjct: 411 PEELGFLRYLKHAKVPLNEFDFSWSKISNIQAQLEKLIEKNYFLHKSAQEAYKSYIRAFA 470
Query: 791 -NSIREIGRDKTTLVELANKFAQSIGLQRPP 820
+S++ I D TL K A S G PP
Sbjct: 471 SHSLKNI-YDVNTLD--LQKVALSFGFHNPP 498
>gi|262377334|ref|ZP_06070558.1| II DNA/RNA helicase [Acinetobacter lwoffii SH145]
gi|262307787|gb|EEY88926.1| II DNA/RNA helicase [Acinetobacter lwoffii SH145]
Length = 624
Score = 211 bits (536), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 132/395 (33%), Positives = 210/395 (53%), Gaps = 22/395 (5%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
K F + + +AL A G+ T VQE + A LEGKD +V ++TG+GK+ AFLLP +
Sbjct: 3 KTFADFSLDESLTQALDALGFTTPTPVQEQAIPAALEGKDLLVSSQTGSGKTAAFLLPTL 62
Query: 439 EAVLKATS----SSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGT 494
A+ + + V +L++ PTRELA Q+ +AIA +++ G+ + ++GG
Sbjct: 63 NALANQDTLVPFKDRMKAVTQPNILVISPTRELAQQVCQDAIAFVRHMKGVRIAAIMGGM 122
Query: 495 RFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKD 554
F ++L+ Q++VATPGRLLD + + ++L + L++DEAD +LDLGF +D
Sbjct: 123 PFGKQIQQLKG--AQVVVATPGRLLDLVNRRQ---IKLDKVDALIVDEADRMLDLGFSED 177
Query: 555 VENIVDCLPRRRQSLLFSATMPKELVLKREHTYIDTVGLGSVETPVKIKQSCLVAPH--- 611
+E I + R+Q+L+FSAT ++ E D + + S+ET H
Sbjct: 178 LEAIGELAANRKQTLMFSATFAPRIITLAERMMNDPMRI-SIETGHSTNTDITQTLHWTD 236
Query: 612 --ELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLY 669
E ++L H L E + + +VF ST T +L L E ++V ++ PQ
Sbjct: 237 GFEHKKKLLTHWLNEEDVD----QAVVFASTQEDTDMLAEELAEAGLSVVALHGAMPQTV 292
Query: 670 RDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEG 729
R+R R + ILV +DV+ARG+D P ++ V+ G+P E Y+HR+GRTGR G+ G
Sbjct: 293 RNRRLRSIREGRAKILVATDVAARGLDVPTISHVINFGLPMKNEDYVHRIGRTGRAGRTG 352
Query: 730 EGVLLLAPWEE---YFLDDLKDLPLDKLQLPHLNP 761
+ + L E L+D D L+ ++ L P
Sbjct: 353 KAITLATYRERGKIRALEDFLDARLNVSEIEGLEP 387
>gi|302506493|ref|XP_003015203.1| hypothetical protein ARB_06326 [Arthroderma benhamiae CBS 112371]
gi|291178775|gb|EFE34563.1| hypothetical protein ARB_06326 [Arthroderma benhamiae CBS 112371]
Length = 816
Score = 211 bits (536), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 160/498 (32%), Positives = 253/498 (50%), Gaps = 43/498 (8%)
Query: 367 KEKREEEPILSQKR-------------FDECGISPLTIKALTAAGYIQMTRVQEATLSAC 413
K KR E+ I S K+ F + +S T L+A+ + ++T +Q +
Sbjct: 25 KRKRNEDDIASLKQRVAELDTKATIESFTDLPLSEPTRLGLSASHFKELTDIQSRAIPHA 84
Query: 414 LEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAA 473
L+G+D + AKTG+GK++AFL+P +E + + + L LI+ PTRELA QI
Sbjct: 85 LQGRDILGAAKTGSGKTLAFLVPVLENLYRKQWTEYDGLG----ALIISPTRELAIQIF- 139
Query: 474 EAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLM 533
E + + + ++GG + +Q RL ILV TPGR+L H++ +
Sbjct: 140 EVLRKIGRYHTFSAGLVIGGKSLQEEQERLGR--MNILVCTPGRMLQHMDQTAAFDTD-- 195
Query: 534 GLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQSLLFSATMPKEL-----VLKREHTYI 588
++MLVLDEAD ++D+GF+ V+ IV+ LP+ RQ++LFSAT K++ + ++ YI
Sbjct: 196 NIQMLVLDEADRIMDMGFQSTVDAIVEHLPKERQTMLFSATQTKKVSDLARLSLQDPEYI 255
Query: 589 DTVGLGSVETPVKIKQSCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLY 648
S TP ++Q +V P L ++ + K+IVF S+ +Y
Sbjct: 256 SVHQTASSATPSTLQQHYVVTPLPDKLDTLWSFIRSSLKS----KIIVFFSSSKEVRFVY 311
Query: 649 LLLREMK--MNVREMYSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQV 706
R+M+ + + ++ R+ Q R I+ +F ASK L +DV ARG+D+P V V+Q+
Sbjct: 312 EAFRQMQPGIPLLHLHGRQKQGARLDITHKFSASKNSCLFATDVVARGLDFPAVDWVIQL 371
Query: 707 GIPPDREQYIHRLGRTGREGKEGEGVLLLAPWEEY-FLDDL--KDLPLDKLQL-PHLNPE 762
P D + YIHR+GRT R ++G VL L P EE L L K +P++K+ + +
Sbjct: 372 DCPEDSDTYIHRVGRTARYERDGRAVLFLDPSEEIGMLSRLEQKKIPIEKINIRANKQQS 431
Query: 763 IQLQMDNHMAKIDNNVKEAAYHAWLGYYNSIREIGRDKTTLVELA---NKFAQSIGLQRP 819
I+ Q+ N M D +K A+ Y SI I +DK A ++A S+GL
Sbjct: 432 IKHQLQN-MCFKDPQLKYLGQKAFTSYVKSIH-IQKDKEVFDVKALPLEEYAASLGLPGA 489
Query: 820 PPL-FRKTALKMGLKDIP 836
P + F K LK+ P
Sbjct: 490 PRIKFIKGEDTKSLKNAP 507
>gi|229368775|gb|ACQ63054.1| DEAD box polypeptide 18 (predicted) [Dasypus novemcinctus]
Length = 670
Score = 211 bits (536), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 155/451 (34%), Positives = 244/451 (54%), Gaps = 41/451 (9%)
Query: 390 TIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSST 449
T+KA+ G+ MT +Q ++ LEG+D + AKTG+GK++AFL+PA+E + K
Sbjct: 190 TLKAIKEMGFTHMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPAVELIYK------ 243
Query: 450 TQLVP--PIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDP 507
+ +P VLIL PTRELA Q L+ H L ++GG+ + ++L +
Sbjct: 244 LKFMPRNGTGVLILSPTRELAMQTFGVLKELMTYHVHTYGL-IMGGSNRSAEAQKL-GNG 301
Query: 508 CQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQ 567
I+VATPGRLLDH++N G + L+ LV+DEAD +LD+GF ++++ I+ LP RRQ
Sbjct: 302 INIIVATPGRLLDHMQNTPGFMYK--NLQCLVIDEADRILDVGFEEELKQIIKLLPVRRQ 359
Query: 568 SLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILHHL 621
++LFSAT ++ + LK+E Y+ + T ++Q +V P E F +L
Sbjct: 360 TMLFSATQTRKVEDLARISLKKEPLYVGVDDDKTNATVDGLEQGYVVCPSEKRFLLLFTF 419
Query: 622 LKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEFRASK 681
LK++ K++VF S+ M Y LL + + V ++ R+ Q R +F +
Sbjct: 420 LKKN----RKKKMMVFFSSCMSVKYHYELLNYIDLPVLAIHGRQKQNKRTSTFFQFCNAD 475
Query: 682 RLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEG--VLLLAPWE 739
IL+ +DV+ARG+D P+V +VQ P D ++YIHR+GRT R G G G +L+L P E
Sbjct: 476 SGILLCTDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTAR-GLNGRGHALLILRPEE 534
Query: 740 EYFLDDLKD--LPLDKLQLPHLN-PEIQLQMDNHMAKIDNNVKEAAYHAWLGYYNSIREI 796
FL LK +PL + + +IQ Q++ + K + + ++A A+ Y IR
Sbjct: 535 LGFLRYLKQSKVPLSEFEFSWSKISDIQSQLEKLIEK-NYFLHKSAQEAYKSY---IR-- 588
Query: 797 GRDKTTLVELAN-------KFAQSIGLQRPP 820
D +L ++ N + A S G + PP
Sbjct: 589 AYDSHSLKQIYNVNNLNLPQVALSFGFKVPP 619
>gi|183396419|gb|ACC62099.1| ATP-dependent RNA helicase DDX18 (predicted) [Rhinolophus
ferrumequinum]
Length = 730
Score = 211 bits (536), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 153/453 (33%), Positives = 244/453 (53%), Gaps = 45/453 (9%)
Query: 390 TIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSST 449
T+KA+ G+ MT +Q ++ LEG+D + AKTG+GK++AFL+PAIE ++K
Sbjct: 250 TLKAIKEMGFTNMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPAIELIVK------ 303
Query: 450 TQLVP--PIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDP 507
+ +P VLIL PTRELA Q L+ +H L ++GG+ + ++L ++
Sbjct: 304 LKFMPRNGTGVLILSPTRELAMQTFGVLKELMTHHVHTYGL-IMGGSNRSAEAQKL-ANG 361
Query: 508 CQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQ 567
I+VATPGRLLDH++N G + L+ LV+DEAD +LD+GF ++++ I+ LP RRQ
Sbjct: 362 INIIVATPGRLLDHMQNTPGFMYK--NLQCLVIDEADRILDVGFEEELKQIIKLLPIRRQ 419
Query: 568 SLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILHHL 621
++LFSAT ++ + LK+E Y+ + T ++Q +V P E F +L
Sbjct: 420 TMLFSATQTRKVEDLARISLKKEPLYVGVDDDKANATVDGLEQGYVVCPSEKRFLLLFTF 479
Query: 622 LKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEFRASK 681
LK++ K++VF S+ Y LL + + V ++ R+ Q R +F +
Sbjct: 480 LKKN----RKKKLMVFFSSCKSVKYHYELLNYIDLPVLAIHGRQKQNKRTTTFFQFCNAD 535
Query: 682 RLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEG--VLLLAPWE 739
IL+ +DV+ARG+D P+V +VQ P D ++YIHR+GRT R G G G +L+L P E
Sbjct: 536 TGILLCTDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTAR-GLNGRGHALLILRPEE 594
Query: 740 EYFLDDLKD--LPLDKLQLPHLN-PEIQLQMDNHMAK--IDNNVKEAAYHAWLGYYNSIR 794
FL LK +PL + + +IQ Q++ + K + + AY +++ Y
Sbjct: 595 LGFLRYLKQSKVPLSEFEFSWSKISDIQSQLEKLIEKNYFLHKSAQEAYKSYIRAY---- 650
Query: 795 EIGRDKTTLVELAN-------KFAQSIGLQRPP 820
D +L ++ N + A S G + PP
Sbjct: 651 ----DSHSLKQIFNVNNLNLPQVALSFGFKVPP 679
>gi|55741498|ref|NP_001006997.1| ATP-dependent RNA helicase DDX18 [Rattus norvegicus]
gi|54035578|gb|AAH83919.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 18 [Rattus norvegicus]
Length = 674
Score = 211 bits (536), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 148/418 (35%), Positives = 228/418 (54%), Gaps = 30/418 (7%)
Query: 390 TIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSST 449
T+KA+ G+ MT +Q ++ LEG+D + AKTG+GK++AFL+P IE ++K
Sbjct: 194 TLKAIEEMGFKHMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPVIELIVK------ 247
Query: 450 TQLVP--PIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDP 507
+ +P VLIL PTRELA Q L+ +H L + G R Q+ L
Sbjct: 248 LKFMPRNGTGVLILSPTRELAMQTFGVLKELMTHHVHTYGLIMGGSNRSAEVQKLLNG-- 305
Query: 508 CQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQ 567
I+VATPGRLLDH++N G + L+ LV+DEAD +LD+GF ++++ I+ LP RRQ
Sbjct: 306 INIVVATPGRLLDHMQNTPGFMYK--NLQCLVIDEADRILDVGFEEELKQIIKLLPARRQ 363
Query: 568 SLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILHHL 621
++LFSAT ++ + LK+E Y+ V T ++Q +V P E F +L
Sbjct: 364 TMLFSATQTRKVEDLARISLKKEPLYVGVDDDKEVATVDGLEQGYVVCPSEKRFLLLFTF 423
Query: 622 LKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEFRASK 681
LK++ KV+VF S+ M Y LL + + V ++ ++ Q R +F +
Sbjct: 424 LKKN----RKKKVMVFFSSCMSVKYHYELLNYIDLPVLAIHGKQKQNKRTTTFFQFCNAD 479
Query: 682 RLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEG--VLLLAPWE 739
IL+ +DV+ARG+D P+V +VQ P D ++YIHR+GRT R G G G +L+L P E
Sbjct: 480 SGILLCTDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTAR-GLNGRGHALLILRPEE 538
Query: 740 EYFLDDLKD--LPLDKLQLPHLN-PEIQLQMDNHMAK--IDNNVKEAAYHAWLGYYNS 792
FL LK +PL++ +IQ Q++ + K + + AY +++ Y+S
Sbjct: 539 LGFLRYLKQSKVPLNQFDFSWSKVSDIQSQLEKLIEKNYFLHKSAQEAYKSYIRAYDS 596
>gi|12860207|dbj|BAB31877.1| unnamed protein product [Mus musculus]
Length = 660
Score = 211 bits (536), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 148/418 (35%), Positives = 229/418 (54%), Gaps = 30/418 (7%)
Query: 390 TIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSST 449
T+KA+ G+ +MT +Q ++ LEG+D + AKTG+GK++AFL+P IE ++K
Sbjct: 180 TLKAIEEMGFKRMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPVIELIVK------ 233
Query: 450 TQLVP--PIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDP 507
+ +P VLIL PTRELA Q L+ +H L + G R Q+ L
Sbjct: 234 LKFMPRNGTGVLILSPTRELAMQTFDVLKELMTHHVHTYGLIMGGSNRSAEVQKLLNG-- 291
Query: 508 CQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQ 567
I+VATPGRLLDH++N G + L+ LV+DEAD +LD+GF ++++ I+ LP RRQ
Sbjct: 292 INIIVATPGRLLDHMQNTPGFMYK--NLQCLVIDEADRILDVGFEEELKQIIKLLPARRQ 349
Query: 568 SLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILHHL 621
++LFSAT ++ + LK+E Y+ V T ++Q +V P E F +L
Sbjct: 350 TMLFSATQTRKVEDLARISLKKEPLYVGVDDDKEVATVDGLEQGYVVCPSEKRFLLLFTF 409
Query: 622 LKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEFRASK 681
LK++ KV+VF S+ M Y LL + + V ++ ++ Q R +F +
Sbjct: 410 LKKN----RKKKVMVFFSSCMSVKYHYELLNYIDLPVLAIHGKQKQNKRTTTFFQFCNAD 465
Query: 682 RLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEG--VLLLAPWE 739
IL+ +DV+ARG+D P+V +VQ P D ++YIHR+GRT R G G G +L+L P E
Sbjct: 466 SGILLCTDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTAR-GLNGRGHALLILRPEE 524
Query: 740 EYFLDDLKD--LPLDKLQLPHLN-PEIQLQMDNHMAK--IDNNVKEAAYHAWLGYYNS 792
FL LK +PL++ +IQ Q++ + K + + AY +++ Y+S
Sbjct: 525 LGFLRYLKQSKVPLNQFDFSWSKVSDIQSQLEKLIEKNYFLHKSAQEAYKSYIRAYDS 582
>gi|445421868|ref|ZP_21436173.1| DEAD/DEAH box helicase [Acinetobacter sp. WC-743]
gi|444757138|gb|ELW81669.1| DEAD/DEAH box helicase [Acinetobacter sp. WC-743]
Length = 622
Score = 211 bits (536), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 130/379 (34%), Positives = 204/379 (53%), Gaps = 19/379 (5%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
K F E + KAL + G+ T VQE ++ A LEGKD +V ++TG+GK+ AFLLP +
Sbjct: 3 KTFAEFSLDESLQKALESLGFTTPTPVQELSIPAALEGKDLLVSSQTGSGKTAAFLLPTL 62
Query: 439 EAVLKATS----SSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGT 494
A+ + + V +L++ PTRELA Q+ +AIA +++ G+ V ++GG
Sbjct: 63 NALAGQDTFVPFKERMKAVTQPNILVISPTRELAQQVCQDAIAFVRHMKGVRVAAIMGGM 122
Query: 495 RFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKD 554
F ++L+ Q++VATPGRLLD + + ++L + L++DEAD +LDLGF +D
Sbjct: 123 PFGKQIQQLKG--AQVVVATPGRLLDLVNRRQ---IKLDSVDALIVDEADRMLDLGFSED 177
Query: 555 VENIVDCLPRRRQSLLFSATMPKELVLKREHTYIDTVGLGSVETPVKIKQSCLVAPH--- 611
+E I D R+Q+L+FSAT ++ E D + ++ET H
Sbjct: 178 LEAISDLALNRKQTLMFSATFAPRIINLAERMMNDPERI-AIETGHSTNTDITQTLHWTD 236
Query: 612 --ELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLY 669
E ++L H L E + + +VF ST T +L L E ++V ++ PQ
Sbjct: 237 GFEHKKKLLTHWLNEEDVD----QAVVFASTQEDTDMLAEELAEAGLSVVALHGAMPQTV 292
Query: 670 RDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEG 729
R+R R + ILV +DV+ARG+D P ++ V+ G+P E Y+HR+GRTGR G+ G
Sbjct: 293 RNRRLRSIREGRAKILVATDVAARGLDVPTISHVINFGLPMKNEDYVHRIGRTGRAGRTG 352
Query: 730 EGVLLLAPWEEYFLDDLKD 748
+ + L E + L+D
Sbjct: 353 KAITLATYRERGKIRALED 371
>gi|356567698|ref|XP_003552054.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 27-like [Glycine
max]
Length = 542
Score = 211 bits (536), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 147/433 (33%), Positives = 235/433 (54%), Gaps = 30/433 (6%)
Query: 375 ILSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFL 434
I+S + F G+S T KA+ G+ +MT++Q + L KD + A+TG GK++AFL
Sbjct: 73 IMSTESFSSLGLSEPTSKAIADMGFHRMTQIQAKAIPPLLTRKDVLGAARTGAGKTLAFL 132
Query: 435 LPAIEAVLKATSSSTTQLVP--PIYVLILCPTRELASQIAAEAIALLKNHD-GIGVLTLV 491
+PA+E + + Q P V+++CPTRELA Q A A LLK H +G+ ++
Sbjct: 133 VPAVELLY------SIQFTPRNGTGVVVICPTRELAIQTHAVAKELLKYHSQTLGL--VI 184
Query: 492 GGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGF 551
GG+ K + R+ +LVATPGRLLDH++N G + LK L++DEAD +L+ F
Sbjct: 185 GGSGRKGEAERIVKG-VNLLVATPGRLLDHLQNTKGFIYK--NLKCLMIDEADRILEANF 241
Query: 552 RKDVENIVDCLPRRRQSLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQS 605
++++ I++ LP++RQ+ LFSAT K+ L + YID T ++Q
Sbjct: 242 EEEMKQIINILPKKRQTALFSATQTKKVEDLARLSFQATPIYIDVDDGRKKVTNEGLQQG 301
Query: 606 CLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRK 665
+V P F +L+ L+ + KV+VF S+ LL+ ++ ++ ++
Sbjct: 302 YVVVPCAKRFVVLYSFLRRY----QSKKVMVFFSSCNSVKFHADLLKCTGLDCLNIHGKQ 357
Query: 666 PQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGR- 724
Q R F +++ IL+ +DV+ARG+D PDV +VQ P + ++YIHR+GRT R
Sbjct: 358 KQHARTTTFFNFCKAEKGILLCTDVAARGLDIPDVDWIVQYDPPDEPKEYIHRVGRTARG 417
Query: 725 EGKEGEGVLLLAPWEEYFLDDLK--DLPLDKLQLPHLN-PEIQLQMDNHMAKID--NNVK 779
EG +G +L L P E FL LK +P+ + H +Q Q++ +A I N +
Sbjct: 418 EGGKGNALLFLIPEELQFLHYLKAAKVPVKEYAFDHKKLANVQSQLEKLVAGIYHLNVMA 477
Query: 780 EAAYHAWLGYYNS 792
+ AY +++ YNS
Sbjct: 478 KDAYRSYILAYNS 490
>gi|403050220|ref|ZP_10904704.1| ATP-dependent RNA helicase [Acinetobacter bereziniae LMG 1003]
Length = 622
Score = 211 bits (536), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 130/379 (34%), Positives = 204/379 (53%), Gaps = 19/379 (5%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
K F E + KAL + G+ T VQE ++ A LEGKD +V ++TG+GK+ AFLLP +
Sbjct: 3 KTFAEFSLDESLQKALESLGFTTPTPVQELSIPAALEGKDLLVSSQTGSGKTAAFLLPTL 62
Query: 439 EAVLKATS----SSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGT 494
A+ + + V +L++ PTRELA Q+ +AIA +++ G+ V ++GG
Sbjct: 63 NALAGQDTFVPFKERMKAVTQPNILVISPTRELAQQVCQDAIAFVRHMKGVRVAAIMGGM 122
Query: 495 RFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKD 554
F ++L+ Q++VATPGRLLD + + ++L + L++DEAD +LDLGF +D
Sbjct: 123 PFGKQIQQLKG--AQVVVATPGRLLDLVNRRQ---IKLDSVDALIVDEADRMLDLGFSED 177
Query: 555 VENIVDCLPRRRQSLLFSATMPKELVLKREHTYIDTVGLGSVETPVKIKQSCLVAPH--- 611
+E I D R+Q+L+FSAT ++ E D + ++ET H
Sbjct: 178 LEAISDLALNRKQTLMFSATFAPRIINLAERMMNDPERI-AIETGHSTNTDITQTLHWTD 236
Query: 612 --ELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLY 669
E ++L H L E + + +VF ST T +L L E ++V ++ PQ
Sbjct: 237 GFEHKKKLLTHWLNEEDVD----QAVVFASTQEDTDMLAEELAEAGLSVVALHGAMPQTV 292
Query: 670 RDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEG 729
R+R R + ILV +DV+ARG+D P ++ V+ G+P E Y+HR+GRTGR G+ G
Sbjct: 293 RNRRLRSIREGRAKILVATDVAARGLDVPTISHVINFGLPMKNEDYVHRIGRTGRAGRTG 352
Query: 730 EGVLLLAPWEEYFLDDLKD 748
+ + L E + L+D
Sbjct: 353 KAITLATYRERGKIRALED 371
>gi|390604200|gb|EIN13591.1| DEAD-domain-containing protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 576
Score = 211 bits (536), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 157/459 (34%), Positives = 240/459 (52%), Gaps = 33/459 (7%)
Query: 378 QKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPA 437
+K F E +S T AL G+ MT +QE ++ L GKD + A+TG+GK++AFL+PA
Sbjct: 24 RKPFSELDLSENTQNALKEMGFTHMTPIQEKSIPPLLTGKDVLGAARTGSGKTLAFLIPA 83
Query: 438 IEAV--LKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNH-DGIGVLTLVGGT 494
IE + +K + T V+I+ PTRELA QI A L+ +H G++ +GG
Sbjct: 84 IELLHRMKFKPRNGTG------VIIVSPTRELALQIFGVAKELMAHHPQTFGIV--MGGA 135
Query: 495 RFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKD 554
K + +L+ +LVATPGRL DH+EN G R LK LV+DEAD +L++GF ++
Sbjct: 136 NRKAEVDKLQKG-VNLLVATPGRLWDHLENTKGFVFR--NLKCLVIDEADRILEVGFEEE 192
Query: 555 VENIVDCLPRR-RQSLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSCL 607
++ I++ +P RQS+LFSAT + + L+ ID + T + Q +
Sbjct: 193 MKKIINMIPNENRQSMLFSATQTTKVQDLARISLRPGPLLIDVDHQEATSTVSTLSQGYV 252
Query: 608 VAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQ 667
V P + F +L LK+++ KVIVF S+ LL + + V +++ ++ Q
Sbjct: 253 VCPSDRRFLLLFTFLKKNL----KKKVIVFFSSCNSVKYHAELLNYIDVPVLDLHGKQKQ 308
Query: 668 LYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGK 727
R EF + IL+ +DV+ARG+D P V +VQ P D YIHR+GRT R GK
Sbjct: 309 QKRTNTFFEFMNAPAGILLCTDVAARGLDIPKVDWIVQYDPPDDPRDYIHRVGRTARAGK 368
Query: 728 EGEGVLLLAPWEEYFLDDLKD--LPLDKLQLPHLN-PEIQLQMDNHMAK---IDNNVKEA 781
G+ +L L P E FL LK+ +PL++ P +Q Q++ + K + + K+
Sbjct: 369 VGKSLLFLLPSELGFLRYLKEAKVPLNEFTFPKERIANVQNQLEKLLTKNYFLHQSAKD- 427
Query: 782 AYHAWLGYYNSIREIGRDKTTLVELANKFAQSIGLQRPP 820
Y ++L Y S ++L K +S G PP
Sbjct: 428 GYRSYLQAYASYSLKKIFDVNQLDLV-KVGKSFGFAVPP 465
>gi|90577843|ref|ZP_01233654.1| putative ATP-dependent RNA helicase [Photobacterium angustum S14]
gi|90440929|gb|EAS66109.1| putative ATP-dependent RNA helicase [Photobacterium angustum S14]
Length = 446
Score = 211 bits (536), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 137/369 (37%), Positives = 207/369 (56%), Gaps = 21/369 (5%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F + G+ P +K + + + T +Q+ + + GKD + +KTG+GK++AFLLPA++
Sbjct: 3 FKDLGLDPRLLKKINHLAFDRATEIQQTAIPVAIAGKDILASSKTGSGKTLAFLLPAMQR 62
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+ + S T+ P VLIL PTRELA Q+ A+ L G L +VGG F
Sbjct: 63 MYR--SKPFTRRDP--RVLILTPTRELAKQVFAQLRTLNAGTPYDGTL-IVGGENFNDQV 117
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
+ L +DP +VATPGRL DH+E++S RL GL+ML+LDEAD +LDLGF + I +
Sbjct: 118 KALRNDPM-FVVATPGRLADHLEHRS---TRLDGLEMLILDEADRMLDLGFEAQLRRINE 173
Query: 561 CL-PRRRQSLLFSATMPKELVLKREHTYIDT---VGLG-SVETPVKIKQSCLVAPHELHF 615
RRRQ+L+FSAT+ V++ +D + +G S E I Q ++ H H
Sbjct: 174 AANHRRRQTLMFSATLDHSDVVEIASEMLDNPKRISIGHSAEEHKDITQRFILCDHLDHK 233
Query: 616 QILHHLLKEHILGTPDYK-VIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRIS 674
Q L + IL T DYK VI+F +T T L L E K+ + Q R+ I
Sbjct: 234 QAL----LDKILETQDYKQVIIFTATRADTDRLTAELNERKLKAVALSGSLNQNQRNSIM 289
Query: 675 EEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLL 734
+F + ILVT+D+++RG+D +V+ V+ +P E+Y+HR+GRTGR G +G+ + L
Sbjct: 290 SQFERTCHKILVTTDIASRGLDIDNVSLVINFDMPKHAEEYVHRVGRTGRAGNKGDAISL 349
Query: 735 LAP--WEEY 741
+ P W+ +
Sbjct: 350 VGPKDWKSF 358
>gi|296806541|ref|XP_002844080.1| ATP-dependent RNA helicase DBP4 [Arthroderma otae CBS 113480]
gi|238845382|gb|EEQ35044.1| ATP-dependent RNA helicase DBP4 [Arthroderma otae CBS 113480]
Length = 803
Score = 211 bits (536), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 154/471 (32%), Positives = 242/471 (51%), Gaps = 30/471 (6%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F + +S T L+A+ + +T +Q + L+G+D + AKTG+GK++AFL+P +E
Sbjct: 52 FTDLPLSEPTRLGLSASHFKTLTDIQARGIPHALQGRDILGAAKTGSGKTLAFLVPVLEN 111
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+ + + L LI+ PTRELA QI E + + + ++GG + +Q
Sbjct: 112 LFRKQWTEYDGL----GALIISPTRELAIQIF-EVLRKIGRYHTFSAGLVIGGKSLQEEQ 166
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
RL ILV TPGR+L H++ + ++MLVLDEAD ++D+GF+ V+ IV+
Sbjct: 167 ERLGR--MNILVCTPGRMLQHMDQTAAFDTD--NIQMLVLDEADRIMDMGFQSTVDAIVE 222
Query: 561 CLPRRRQSLLFSATMPKEL-----VLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHF 615
LP+ RQ++LFSAT K++ + R+ YI S TP ++Q +V P
Sbjct: 223 HLPKERQTMLFSATQTKKVSDLARLSLRDPEYISVHEAASSATPSTLQQHYVVTPLPDKL 282
Query: 616 QILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK--MNVREMYSRKPQLYRDRI 673
L ++ + K+IVF S+ +Y R+M+ + + ++ R+ Q R I
Sbjct: 283 DTLWSFIRSSLKS----KIIVFFSSSKEVRFVYEAFRQMQPGIPLLHLHGRQKQGARVDI 338
Query: 674 SEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVL 733
+ +F SK L +DV ARG+D+P V V+Q+ P D + YIHR+GRT R ++G VL
Sbjct: 339 THKFSTSKNSCLFATDVVARGLDFPAVDWVIQLDCPEDSDTYIHRVGRTARYERDGRAVL 398
Query: 734 LLAPWEEY-FLDDL--KDLPLDKLQL-PHLNPEIQLQMDNHMAKIDNNVKEAAYHAWLGY 789
L P EE L L K +P++K+ + + I+ Q+ N M D +K A+ Y
Sbjct: 399 FLDPSEEIGMLSRLEQKKIPIEKINIRANKQQSIKHQLQN-MCFKDPQLKYLGQKAFTSY 457
Query: 790 YNSIREIGRDKTTLVELA---NKFAQSIGLQRPPPL-FRKTALKMGLKDIP 836
SI I +DK A +FA S+GL P + F K LK+ P
Sbjct: 458 VKSI-HIQKDKEVFDVKALPLEEFAASLGLPGAPRIKFIKGEDTKSLKNAP 507
>gi|451999043|gb|EMD91506.1| hypothetical protein COCHEDRAFT_1175511 [Cochliobolus
heterostrophus C5]
Length = 813
Score = 211 bits (536), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 151/465 (32%), Positives = 241/465 (51%), Gaps = 41/465 (8%)
Query: 377 SQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLP 436
S K F + +S T + L +A + MT +Q + L+G D + AKTG+GK+++F++P
Sbjct: 47 SYKDFTDLPLSDPTKQGLKSAHFAVMTDIQAKAIPLALKGHDILGAAKTGSGKTLSFIIP 106
Query: 437 AIEAVLKATSSSTTQLVPP---IYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGG 493
+E + + Q V P + LIL PTRELA QI + ++ L+GG
Sbjct: 107 VLENLYR------LQHVGPDAGLGALILSPTRELAIQIFDVLRKIGRHGHMFAAGLLIGG 160
Query: 494 TRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRK 553
+ ++ L ILVATPGR+L H+ + +V LKMLVLDEAD +LD+GF++
Sbjct: 161 KSLQAEREALTK--MNILVATPGRMLQHLSQTAAFNVD--DLKMLVLDEADRILDMGFQR 216
Query: 554 DVENIVDCLPRRRQSLLFSATMPKEL-----VLKREHTYIDTVGLGSVETPVKIKQSCLV 608
DV+ I++ LP+ RQ+LLFSAT K++ + ++ Y+ TP + Q+ ++
Sbjct: 217 DVDAIIEYLPKERQTLLFSATQSKKVSDLARLSLQDPEYVSVHAEDKSATPKGLTQNYII 276
Query: 609 APHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK--MNVREMYSRKP 666
P E L ++ + K++ F S+ +Y R M+ + + ++ R+
Sbjct: 277 CPLEEKLDTLWSFIQ----ASKKSKILCFFSSAKTVRFVYESFRHMQPGIPLLHIHGRQK 332
Query: 667 QLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREG 726
Q R + +F ++K L +DV+ARG+D+P V V+QV P D + YIHR+GRT R
Sbjct: 333 QGARLDTTAKFSSAKHSCLFATDVAARGLDFPAVDFVIQVDCPDDVDTYIHRVGRTARYN 392
Query: 727 KEGEGVLLLAPWEEYFLDDLKDLPLDKLQLPHLN------PEIQLQMDNHMAKIDNNVKE 780
+EG GVL LAP EE + LK L K+ + +N I+ Q+ N M D +K
Sbjct: 393 REGRGVLFLAPSEEEGM--LKRLEAKKVPIEMINVRQKKRQSIKDQLQN-MCFQDPALKY 449
Query: 781 AAYHAWLGYYNSI-----REIGRDKTTLVELANKFAQSIGLQRPP 820
A++ + SI +E+ + K +E +A S+GL P
Sbjct: 450 LGQKAFMTHVKSIYLQKDKEVFKLKEYNLE---AYAASLGLPGTP 491
>gi|169606986|ref|XP_001796913.1| hypothetical protein SNOG_06545 [Phaeosphaeria nodorum SN15]
gi|160707127|gb|EAT86376.2| hypothetical protein SNOG_06545 [Phaeosphaeria nodorum SN15]
Length = 689
Score = 211 bits (536), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 167/508 (32%), Positives = 261/508 (51%), Gaps = 72/508 (14%)
Query: 364 GEKKEKREEEPILSQKRFDECG----ISPLTIKALTAAGYIQ-MTRVQEATLSACLEGKD 418
++ E +E PI FDE + P I +T + MT VQ T++ L G D
Sbjct: 63 AQQAETEQEGPI---TEFDELAKRGLVHPNLINTITRQMRLTTMTDVQTRTINEALYGTD 119
Query: 419 -AVVKAKTGTGKSIAFLLPAIEAVL--------------KATSSSTTQLVPPIYVLILCP 463
++ +AKTGTGK++ FL+P I+ ++ KA S I +++ P
Sbjct: 120 ISIAQAKTGTGKTLGFLIPVIQRIISNDPKLGETVRGYKKARSDD-------IRAIVISP 172
Query: 464 TRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIE 523
TRELA QIA EA + G+ V T VGGT+ + ++ + + C +L+ TPGRL D +
Sbjct: 173 TRELAEQIAVEAKKVTTG-TGVIVQTAVGGTQKRAMLQKTQREGCHLLIGTPGRLNDILS 231
Query: 524 NKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRR----RQSLLFSATMPKEL 579
+ ++ L V+DEAD LLD GF ++++ I LP RQ+++FSAT+P+++
Sbjct: 232 DPYS-GIKAPNLNAFVMDEADRLLDEGFTREIDEIRTHLPDPEQVPRQNMMFSATVPRDV 290
Query: 580 V------LKREHTYIDTVGLGSVETPVKIKQSCL-VAPHELHFQILHHL-LKEHILGT-- 629
V L+ + V T ++ Q + VA E L+ L L+EH
Sbjct: 291 VELVRKTLRPGFHFAKCVDENEEPTHQRVPQKFVSVAGFENIIPTLYELTLREHQAAQSG 350
Query: 630 ---PDYKVIVFCSTG---MVTSLLYLLLREMKMNVR-------EMYSRKPQLYRDRISEE 676
P ++ F ST + S+ Y L K N E++++ Q R R +++
Sbjct: 351 QARPFKAIMYFNSTAEVALAASVFYKLSGGFKRNTPLQGLRAFEIHAKLSQQQRTRAADD 410
Query: 677 FRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLA 736
FR++ +L +SDV+ARGMD+P+VT V+QVG+P DR+ YIHR+GRTGR GKEGEG +LL
Sbjct: 411 FRSTTSGVLFSSDVTARGMDFPNVTHVIQVGLPRDRDTYIHRIGRTGRAGKEGEGWILLT 470
Query: 737 PWE-EYFLDDLKDLPLD---KLQLPHLNPEIQLQMDNHMAKIDNNVKEA---AY-----H 784
P+E + L++LP+ +LQ ++ ++ H+ +I + EA Y
Sbjct: 471 PFEMQEHTRRLRNLPITESKELQCASIDMSQPAEVPEHVGEILTSCVEAHKKVYPDQLDA 530
Query: 785 AWLGYYNSIREIGRDKTTLVELANKFAQ 812
A+ G + S + G DK LV AN+ A+
Sbjct: 531 AFRGIFGSFQWYG-DKHGLVAGANRLAE 557
>gi|3342758|gb|AAC27683.1| helicase pitchoune [Drosophila melanogaster]
Length = 663
Score = 211 bits (536), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 149/460 (32%), Positives = 249/460 (54%), Gaps = 35/460 (7%)
Query: 385 GISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKA 444
+S T++A+ G+ +MT +Q +L+ L+G+D V A+TG+GK++AFL+PA+E + K
Sbjct: 176 AVSEATLRAIKEMGFTEMTEIQSKSLTPLLKGRDLVGAAQTGSGKTLAFLIPAVELINK- 234
Query: 445 TSSSTTQLVP--PIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRR 502
+ +P V+I+ PTREL+ Q L+ +H L + GG+ +V+ +
Sbjct: 235 -----LRFMPRNGTGVIIISPTRELSMQTFGVLKELMAHHHHTYGLVM-GGSNRQVESEK 288
Query: 503 LESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCL 562
L ILVATPGRLLDH++N + L+ L++DE D +L++GF ++++ I++ L
Sbjct: 289 L-GKGINILVATPGRLLDHLQNSPDFLYK--NLQCLIIDEVDRILEIGFEEELKQIINLL 345
Query: 563 PRRRQSLLFSATMP------KELVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQ 616
P+RRQ++LFSAT +L LK E Y+ T ++Q +V P E
Sbjct: 346 PKRRQTMLFSATQTARIEALSKLALKSEPIYVGVHDNQDTATVDGLEQGYIVCPSEKRLL 405
Query: 617 ILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEE 676
+L LK++ KV+VF S+ M + L + + V ++ ++ Q R +
Sbjct: 406 VLFTFLKKN----RKKKVMVFFSSCMSVKYHHELFNYIDLPVTSIHGKQKQTKRTTTFFQ 461
Query: 677 FRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGR-EGKEGEGVLLL 735
F ++ IL+ +DV+ARG+D P V +VQ P D+ IHR+GRT R G G +LL+
Sbjct: 462 FCNAESGILLCTDVAARGLDIPQVDWIVQYDPPGDQASIIHRVGRTARGSGTSGHALLLM 521
Query: 736 APWEEYFLDDLK--DLPLDKLQLPHLN-PEIQLQMDNHMAK---IDNNVKEAAYHAWLGY 789
P E FL LK +PL++ + +IQLQ++ +AK ++ + KE A+ +++
Sbjct: 522 RPEELGFLRYLKAAKVPLNEFEFSWQKIADIQLQLEKLIAKNYFLNQSAKE-AFKSYVRA 580
Query: 790 YNS--IREIGRDKTTLVELANKFAQSIGLQRPPPLFRKTA 827
Y+S +++I T ++ A+S G PP + K A
Sbjct: 581 YDSHQLKQIFNVNTLDLQAV---AKSFGFLVPPVVDLKVA 617
>gi|451848323|gb|EMD61629.1| hypothetical protein COCSADRAFT_148556 [Cochliobolus sativus
ND90Pr]
Length = 813
Score = 211 bits (536), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 151/465 (32%), Positives = 241/465 (51%), Gaps = 41/465 (8%)
Query: 377 SQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLP 436
S K F + +S T + L +A + MT +Q + L+G D + AKTG+GK+++F++P
Sbjct: 47 SYKDFTDLPLSDPTKQGLKSAHFAVMTDIQAKAIPLALKGHDILGAAKTGSGKTLSFIIP 106
Query: 437 AIEAVLKATSSSTTQLVPP---IYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGG 493
+E + + Q V P + LIL PTRELA QI + ++ L+GG
Sbjct: 107 VLENLYR------LQHVGPDAGLGALILSPTRELAIQIFDVLRKIGRHGHMFAAGLLIGG 160
Query: 494 TRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRK 553
+ ++ L ILVATPGR+L H+ + +V LKMLVLDEAD +LD+GF++
Sbjct: 161 KSLQAEREALTK--MNILVATPGRMLQHLSQTAAFNVD--DLKMLVLDEADRILDMGFQR 216
Query: 554 DVENIVDCLPRRRQSLLFSATMPKEL-----VLKREHTYIDTVGLGSVETPVKIKQSCLV 608
DV+ I++ LP+ RQ+LLFSAT K++ + ++ Y+ TP + Q+ ++
Sbjct: 217 DVDAIIEYLPKERQTLLFSATQSKKVSDLARLSLQDPEYVSVHAEDKTATPKGLTQNYII 276
Query: 609 APHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK--MNVREMYSRKP 666
P E L ++ + K++ F S+ +Y R M+ + + ++ R+
Sbjct: 277 CPLEEKLDTLWSFIQ----SSKKSKILCFFSSAKTVRFVYESFRHMQPGIPLLHIHGRQK 332
Query: 667 QLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREG 726
Q R + +F ++K L +DV+ARG+D+P V V+QV P D + YIHR+GRT R
Sbjct: 333 QGARLDTTAKFSSAKHSCLFATDVAARGLDFPAVDFVIQVDCPDDVDTYIHRVGRTARYN 392
Query: 727 KEGEGVLLLAPWEEYFLDDLKDLPLDKLQLPHLN------PEIQLQMDNHMAKIDNNVKE 780
+EG GVL LAP EE + LK L K+ + +N I+ Q+ N M D +K
Sbjct: 393 REGRGVLFLAPSEEEGM--LKRLEAKKVPIEMINVRQKKRQSIKDQLQN-MCFQDPALKY 449
Query: 781 AAYHAWLGYYNSI-----REIGRDKTTLVELANKFAQSIGLQRPP 820
A++ + SI +E+ + K +E +A S+GL P
Sbjct: 450 LGQKAFMTHVKSIYLQKDKEVFKLKEYNLE---AYAASLGLPGTP 491
>gi|342319377|gb|EGU11326.1| ATP-dependent RNA helicase dbp-4 [Rhodotorula glutinis ATCC 204091]
Length = 822
Score = 211 bits (536), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 170/522 (32%), Positives = 250/522 (47%), Gaps = 63/522 (12%)
Query: 347 QVELIRKEISKNKLNGNGEKKEKREEEPILSQKRFD--------ECGISPL---TIKALT 395
Q R++ K K NG +KK + Q+R D E G PL T+ L
Sbjct: 4 QAAETREDKGKGKANGRVQKKLGDRSDLDDLQRRVDTFETTDAQEFGDLPLSRQTLAGLK 63
Query: 396 AAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLVPP 455
+A Y +MT VQ+ L L+GKD + A+TG+GK++AFL+P +E +L+ L
Sbjct: 64 SAYYTRMTDVQQRALPLALKGKDVLGAARTGSGKTLAFLIPVLEVLLRKRWGQQDGL--- 120
Query: 456 IYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILVATP 515
L++ PTRELA QI E + + + ++GG K +Q RL IL+ATP
Sbjct: 121 -GALVISPTRELAVQIF-EVLRKIGHQHNFSAGLVIGGKNLKHEQERLSR--MNILIATP 176
Query: 516 GRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQSLLFSATM 575
GRLL H++ G L++LVLDEAD +LD+GF + IV LP+ RQ+LLFSAT
Sbjct: 177 GRLLQHMDQTLGFDCD--HLQLLVLDEADRILDMGFSATLNAIVANLPKSRQTLLFSATQ 234
Query: 576 PKE------LVLKR-EHTYIDTVGLGS-----------------VETPVKIKQSCLVAPH 611
K L LK E+ + G G E P ++Q +V
Sbjct: 235 TKSVKDLARLSLKEPEYVAVRETGAGKGKEKAEDGEGEGEEEQVEEVPKNLEQHYMVVEL 294
Query: 612 ELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNV--REMYSRKPQLY 669
+L +K H+ K IVF S+ +Y R M+ V M+ ++ Q+
Sbjct: 295 PQKLDMLWSFIKTHLYT----KTIVFLSSTKQVRFVYENFRHMRPGVPLMHMHGKQKQMQ 350
Query: 670 RDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEG 729
R I + F SK IL +DV+ARG+D+P + VVQV P D E YIHR+GRT R +G
Sbjct: 351 RLEIYQRFLTSKHAILFATDVAARGLDFPAIDWVVQVDAPEDVETYIHRVGRTARYQAKG 410
Query: 730 EGVLLLAPWEEYFLDDLKDLPLDKLQLPHLNP------EIQLQMDNHMAKIDNNVKEAAY 783
+L L P EE + LK K+++ + I+ Q+ N + +K A
Sbjct: 411 RALLFLLPSEEEGM--LKRFEAKKIEVNKIKANDKKKQSIRSQLQNAAFQY-PEIKFLAQ 467
Query: 784 HAWLGYYNSIREIGRDKTTLVELA---NKFAQSIGLQRPPPL 822
A++ Y S+ + +DK+ A ++A S+GL P +
Sbjct: 468 RAFISYVRSV-HLQKDKSIFKLDALPLEEYAASLGLAGAPKI 508
>gi|198452859|ref|XP_002137552.1| GA26479 [Drosophila pseudoobscura pseudoobscura]
gi|198132109|gb|EDY68110.1| GA26479 [Drosophila pseudoobscura pseudoobscura]
Length = 716
Score = 211 bits (536), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 148/453 (32%), Positives = 248/453 (54%), Gaps = 35/453 (7%)
Query: 385 GISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKA 444
+S T++A+ G+ +MT +Q +L+ L+G+D V A+TG+GK++AFL+PA+E + K
Sbjct: 229 AVSEATLRAIKEMGFSEMTEIQAKSLTPLLKGRDLVGAAQTGSGKTLAFLIPAVELINK- 287
Query: 445 TSSSTTQLVP--PIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRR 502
+ +P V+I+ PTREL+ Q L+ +H L + GG+ +V+ +
Sbjct: 288 -----LRFMPRNGTGVIIISPTRELSMQTFGVLKELMAHHHHTYGLVM-GGSNRQVESEK 341
Query: 503 LESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCL 562
L ILVATPGRLLDH++N + L+ L++DE D +L++GF ++++ I++ L
Sbjct: 342 L-GKGINILVATPGRLLDHLQNSPDFLYK--NLQCLIIDEVDRILEIGFEEELKQIINLL 398
Query: 563 PRRRQSLLFSATMP------KELVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQ 616
P+RRQ++LFSAT +L LK E Y+ T ++Q +V P E
Sbjct: 399 PKRRQTMLFSATQTARIEALSKLALKSEPIYVGVHDDEVTATVDGLEQGYIVCPSEKRLL 458
Query: 617 ILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEE 676
+L LK++ KV+VF S+ M + L + + V ++ ++ Q R +
Sbjct: 459 VLFTFLKKN----RKKKVMVFFSSCMSVKYHHELFNYIDLPVTSIHGKQKQTKRTTTFFQ 514
Query: 677 FRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGR-EGKEGEGVLLL 735
F ++ IL+ +DV+ARG+D P V +VQ P D ++YIHR+GRT R G G +LL+
Sbjct: 515 FCNAETGILLCTDVAARGLDIPQVDWIVQYDPPDDPKEYIHRVGRTARGSGTSGHALLLM 574
Query: 736 APWEEYFLDDLK--DLPLDKLQLPHLN-PEIQLQMDNHMAK---IDNNVKEAAYHAWLGY 789
P E FL LK +PL++ + +IQLQ++ +AK ++ + KE A+ +++
Sbjct: 575 RPEELGFLRYLKAAKVPLNEFEFSWQKIADIQLQLEKLIAKNYFLNQSAKE-AFKSYVRA 633
Query: 790 YNS--IREIGRDKTTLVELANKFAQSIGLQRPP 820
Y+S +++I T ++ +K S G PP
Sbjct: 634 YDSHQLKQIFNVNTLDLQAVSK---SFGFLVPP 663
>gi|194743072|ref|XP_001954024.1| GF18065 [Drosophila ananassae]
gi|190627061|gb|EDV42585.1| GF18065 [Drosophila ananassae]
Length = 678
Score = 211 bits (536), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 148/453 (32%), Positives = 247/453 (54%), Gaps = 35/453 (7%)
Query: 385 GISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAV--L 442
+S T++A+ G+ +MT +Q +L+ L+G+D V A+TG+GK++AFL+PA+E + L
Sbjct: 191 AVSEATLRAVQEMGFTEMTEIQAKSLTPLLKGRDLVGAAQTGSGKTLAFLIPAVELINKL 250
Query: 443 KATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRR 502
+ + T V+I+ PTREL+ Q L+ +H L + GG+ +V+ +
Sbjct: 251 RFMPRNGTG------VIIISPTRELSMQTFGVLKELMAHHHHTYGLVM-GGSNRQVESEK 303
Query: 503 LESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCL 562
L ILVATPGRLLDH++N + L+ L++DE D +L++GF ++++ I++ L
Sbjct: 304 L-GKGINILVATPGRLLDHLQNSPDFLYK--NLQCLIIDEVDRILEIGFEEELKQIINLL 360
Query: 563 PRRRQSLLFSATMP------KELVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQ 616
P+RRQ++LFSAT +L LK E Y+ T ++Q +V P E
Sbjct: 361 PKRRQTMLFSATQTAKIDALSKLALKAEPIYVGVHDNQDTATVDGLEQGYIVCPSEKRLL 420
Query: 617 ILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEE 676
+L LK++ KV+VF S+ M + L + + V ++ ++ Q R +
Sbjct: 421 VLFTFLKKN----RKKKVMVFFSSCMSVKYHHELFNYIDLPVTSIHGKQKQTKRTTTFFQ 476
Query: 677 FRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGR-EGKEGEGVLLL 735
F ++ IL+ +DV+ARG+D P V +VQ P D +YIHR+GRT R G G +LL+
Sbjct: 477 FCNAESGILLCTDVAARGLDIPQVDWIVQYDPPDDPREYIHRVGRTARGSGTSGHALLLM 536
Query: 736 APWEEYFLDDLK--DLPLDKLQLPHLN-PEIQLQMDNHMAK---IDNNVKEAAYHAWLGY 789
P E FL LK +PL++ + +IQLQ++ +AK ++ + KE A+ +++
Sbjct: 537 RPEELGFLRYLKAAKVPLNEFEFSWQKIADIQLQLEKLIAKNYFLNQSAKE-AFKSYVRA 595
Query: 790 YNS--IREIGRDKTTLVELANKFAQSIGLQRPP 820
Y+S +++I T ++ A+S G PP
Sbjct: 596 YDSHQLKQIFNVNTLDLQAV---AKSFGFLVPP 625
>gi|409358149|ref|ZP_11236512.1| cold-shock DEAD-box protein [Dietzia alimentaria 72]
Length = 664
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 143/421 (33%), Positives = 219/421 (52%), Gaps = 31/421 (7%)
Query: 368 EKREEEPILSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGT 427
E +E P + F + G++P +A+ GY + +Q AT+ LEG+D V A+TGT
Sbjct: 32 ESVDEAP---EPTFADMGLAPAVAQAVKDVGYEVPSAIQAATIPLVLEGRDVVGLAQTGT 88
Query: 428 GKSIAFLLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGV 487
GK+ AF LP + + A S L+L PTRELA Q+A + N + V
Sbjct: 89 GKTAAFALPILSLIDPAVKSP--------QALVLAPTRELALQVAEACVTYSANMPQVNV 140
Query: 488 LTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLL 547
L + GG + + L QI+V TPGR++DH+ K G ++ L GL+ LVLDEAD +L
Sbjct: 141 LPIYGGQAYGIQLSGLRRG-AQIIVGTPGRVIDHL--KKG-TLDLSGLRHLVLDEADEML 196
Query: 548 DLGFRKDVENIVDCLPRRRQSLLFSATMPKEL--VLKREHTYIDTVGLGS-VETPVKIKQ 604
+GF++DVE I+ P Q LFSATMP + + ++ T V + S T I+Q
Sbjct: 197 AMGFQEDVERILSDTPETTQVALFSATMPAAIRRISQKYLTNPAEVKVASKTSTAPTIQQ 256
Query: 605 SCLVAPHELHFQILHHLLKEHILGTPDYK-VIVFCSTGMVTSLLYLLLREMKMNVREMYS 663
++ H L + + D++ +I+F T T L LR + +
Sbjct: 257 RYVLVNHRDKLDALTRIFEVE-----DFEAMIMFVRTKSATEELAERLRARGFSAAPING 311
Query: 664 RKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTG 723
PQ R+R E + + ILV +DV+ARG+D P ++ VV IP D E YIHR+GRTG
Sbjct: 312 DIPQNLRERTIEALKDGRTDILVATDVAARGLDVPRISHVVNYDIPHDTESYIHRIGRTG 371
Query: 724 REGKEGEGVLLLAPWEEYFLDDLKDL---PLDKLQLPHLNPEIQLQMDNHMAKIDNNVKE 780
R G+ G+ +L + P E L ++ PL ++QLP ++ +++ MAK +++ E
Sbjct: 372 RAGRSGQALLFVTPRERRMLSQIERATRQPLTEIQLPSVDDVNEMR----MAKFSHSITE 427
Query: 781 A 781
+
Sbjct: 428 S 428
>gi|262373548|ref|ZP_06066826.1| DEAD/DEAH box helicase [Acinetobacter junii SH205]
gi|262311301|gb|EEY92387.1| DEAD/DEAH box helicase [Acinetobacter junii SH205]
Length = 642
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 131/395 (33%), Positives = 209/395 (52%), Gaps = 22/395 (5%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
K F E + +AL G+ T VQE + A LEGKD +V ++TG+GK+ AFLLP +
Sbjct: 3 KTFAEFSLHETLQQALEGLGFTSPTPVQEQAIPAALEGKDLLVSSQTGSGKTAAFLLPTL 62
Query: 439 EAVLKATS----SSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGT 494
A+ + + + +L+LCPTRELA Q++ +AIA +++ G+ + ++GG
Sbjct: 63 NALTGQETFVPFKERMKAITQPSILVLCPTRELAQQVSQDAIAFVRHMKGVRIAAIMGGM 122
Query: 495 RFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKD 554
F ++L+ Q++VATPGRLLD + + ++L ++ L++DEAD +LDLGF +D
Sbjct: 123 PFGKQIQQLKG--AQVIVATPGRLLDLVNRRQ---LKLDKVESLIVDEADRMLDLGFSED 177
Query: 555 VENIVDCLPRRRQSLLFSATMPKELVLKREHTYIDTVGLGSVETPVKIKQSCLVAPH--- 611
+E I + R Q+L+FSAT ++ E D + ++ET H
Sbjct: 178 LEAIGELAANRNQTLMFSATFADRIIRLAERMMNDPQRI-AIETGHSTNTDVTQTLHWTD 236
Query: 612 --ELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLY 669
E ++L H L + + + +VF ST T +L L E +V ++ PQ
Sbjct: 237 GFEHKKKLLTHWLSDESVD----QAVVFASTQEDTDMLAEELAEAGHSVVALHGAMPQTV 292
Query: 670 RDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEG 729
R+R R + ILV +DV+ARG+D P ++ V+ G+P E Y+HR+GRTGR G+ G
Sbjct: 293 RNRRLRSIREGRAKILVATDVAARGLDVPTISHVINFGLPMKNEDYVHRIGRTGRAGRTG 352
Query: 730 EGVLLLAPWEE---YFLDDLKDLPLDKLQLPHLNP 761
+ + L E L+D D L+ ++ L P
Sbjct: 353 QAITLATYRERGKIRALEDYLDARLNVSEIEGLEP 387
>gi|340053868|emb|CCC48162.1| putative ATP-dependent RNA helicase [Trypanosoma vivax Y486]
Length = 884
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 157/505 (31%), Positives = 252/505 (49%), Gaps = 32/505 (6%)
Query: 346 EQVELIRKEISKNKLNGNGEKKEKREEEPILSQKRFDECGISPLTIKALTAAGYIQMTRV 405
E++E +RK+ +L +++EK +EP S F++ +S T L GY +MT +
Sbjct: 85 EEIEELRKQY--EELREALDEEEKGHQEPRFSYTHFNQLPLSQRTQLGLERGGYKRMTPI 142
Query: 406 QEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLVPPIYVLILCPTR 465
Q L L G D + A+TG+GK++ F++P +E + + + ++L PTR
Sbjct: 143 QCDALHLALAGHDVLGAARTGSGKTLCFIIPVLERLYVEQWEAAM----GVGAILLSPTR 198
Query: 466 ELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENK 525
ELA QI + + L+ + L GG + +++RL + I+V TPGR+L H+E+
Sbjct: 199 ELALQIF-KVLQLVGYKHVLSAALLTGGRDVEEERKRLSA--ISIIVGTPGRVLHHLEDD 255
Query: 526 SGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQSLLFSATMPKELVLK--- 582
+ L L++LV+DEAD LLD+GFR+ + +I+ LP+ RQ+LLFSAT ++ +
Sbjct: 256 ANLVTD--NLQLLVMDEADRLLDMGFRETLNSILQQLPQARQTLLFSATQTTDVKMLGQM 313
Query: 583 --REHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCST 640
R Y+ + TP + Q+ LV +L LK H P+ K +VF ST
Sbjct: 314 SLRNQRYVTAHAETAAPTPSTLCQNFLVVELHRKLDVLLLFLKRH----PNDKFVVFMST 369
Query: 641 GMVTSLLYL----LLREMKMNVREMYSRKPQLYRDRISEEFRASKRLILVTSDVSARGMD 696
+YL +L++M++ + S+ Q R+ + F K +L +DV+ARG+D
Sbjct: 370 CNQVRYMYLAFAKILKKMRIPCMCLTSKMKQFRREEVFLTFCRCKNAVLFCTDVAARGLD 429
Query: 697 YPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLAPWEEYFLDDL--KDLPLDKL 754
+P + VQ P + YIHR GRT R G G +L L P E L L K +PL ++
Sbjct: 430 FPLIHWSVQYDCPDSAQTYIHRAGRTARAGARGVSLLFLTPRETTMLSFLASKHIPLREI 489
Query: 755 QL-PHLNPEIQLQMDNHMAKIDNNVKEAAYHAWLGYYNSIREIGRDKTTLVELAN--KFA 811
+ P L +Q + +A + +K A A++ Y S+ V + FA
Sbjct: 490 AVRPTL---LQESKEIFVALVVQGLKYEAQKAFIAYMRSVYFAANKLVFDVSSIDVKPFA 546
Query: 812 QSIGLQRPPPLFRKTALKMGLKDIP 836
S+GL P L L G K++P
Sbjct: 547 HSLGLLNVPDLSELQNLHRGAKNLP 571
>gi|149033136|gb|EDL87954.1| rCG37594 [Rattus norvegicus]
Length = 623
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 157/451 (34%), Positives = 241/451 (53%), Gaps = 41/451 (9%)
Query: 390 TIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSST 449
T+KA+ G+ MT +Q ++ LEG+D + AKTG+GK++AFL+P IE ++K
Sbjct: 143 TLKAIEEMGFKHMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPVIELIVK------ 196
Query: 450 TQLVP--PIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDP 507
+ +P VLIL PTRELA Q L+ +H L + G R Q+ L
Sbjct: 197 LKFMPRNGTGVLILSPTRELAMQTFGVLKELMTHHVHTYGLIMGGSNRSAEVQKLLNG-- 254
Query: 508 CQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQ 567
I+VATPGRLLDH++N G + L+ LV+DEAD +LD+GF ++++ I+ LP RRQ
Sbjct: 255 INIVVATPGRLLDHMQNTPGFMYK--NLQCLVIDEADRILDVGFEEELKQIIKLLPARRQ 312
Query: 568 SLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILHHL 621
++LFSAT ++ + LK+E Y+ V T ++Q +V P E F +L
Sbjct: 313 TMLFSATQTRKVEDLARISLKKEPLYVGVDDDKEVATVDGLEQGYVVCPSEKRFLLLFTF 372
Query: 622 LKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEFRASK 681
LK++ KV+VF S+ M Y LL + + V ++ ++ Q R +F +
Sbjct: 373 LKKN----RKKKVMVFFSSCMSVKYHYELLNYIDLPVLAIHGKQKQNKRTTTFFQFCNAD 428
Query: 682 RLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEG--VLLLAPWE 739
IL+ +DV+ARG+D P+V +VQ P D ++YIHR+GRT R G G G +L+L P E
Sbjct: 429 SGILLCTDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTAR-GLNGRGHALLILRPEE 487
Query: 740 EYFLDDLKD--LPLDKLQLPHLN-PEIQLQMDNHMAKIDNNVKEAAYHAWLGYYNSIREI 796
FL LK +PL++ +IQ Q++ + K + + ++A A+ Y IR
Sbjct: 488 LGFLRYLKQSKVPLNQFDFSWSKVSDIQSQLEKLIEK-NYFLHKSAQEAYKSY---IR-- 541
Query: 797 GRDKTTLVELAN-------KFAQSIGLQRPP 820
D +L ++ N + A S G + PP
Sbjct: 542 AYDSHSLKQIFNVNNLNLPQVALSFGFKVPP 572
>gi|418054509|ref|ZP_12692565.1| DEAD/DEAH box helicase domain protein [Hyphomicrobium denitrificans
1NES1]
gi|353212134|gb|EHB77534.1| DEAD/DEAH box helicase domain protein [Hyphomicrobium denitrificans
1NES1]
Length = 532
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 130/376 (34%), Positives = 197/376 (52%), Gaps = 12/376 (3%)
Query: 376 LSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLL 435
+ K F + G+SP A+TAAGY+ T +Q A + L G+D + A+TGTGK+ +F+L
Sbjct: 1 MDSKTFADLGLSPKVQAAVTAAGYVNPTPIQAAAIPVALTGRDVLGIAQTGTGKTASFVL 60
Query: 436 PAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTR 495
P I + + + LIL PTRELA+Q+A NH + + L+GG
Sbjct: 61 PMITRLEAGRARARMP-----RSLILAPTRELAAQVAQSFEKYGTNHK-LSLALLIGGVS 114
Query: 496 FKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDV 555
++L+ +L+ATPGRLLDH V LMG+++LV+DEAD +LD+GF D+
Sbjct: 115 MDDQVKKLDRG-VDVLIATPGRLLDHFGRGR---VMLMGVEILVIDEADRMLDMGFIPDI 170
Query: 556 ENIVDCLPRRRQSLLFSATMPKELVLKREHTYIDT--VGLGSVETPVKIKQSCLVAPHEL 613
E I LP RRQ+L FSATMP E+ + D + + T K V
Sbjct: 171 EKICKLLPPRRQTLFFSATMPPEITRLVDQFLKDPMRIEVAKPATTAKTITQRFVYCQNG 230
Query: 614 HFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRI 673
+L+E I I+FC+ ++LY L + N ++ Q R
Sbjct: 231 EDWAKREMLRELIRDGNVKNAIIFCNRKRDVAVLYKSLSKHGFNAGALHGDMDQTSRMDT 290
Query: 674 SEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVL 733
++FR + ++L SDV+ARG+D PDV+ V +P + Y+HR+GRTGR G+EG
Sbjct: 291 LDKFRNGEIMLLAASDVAARGLDIPDVSHVFNFDLPWAADDYVHRIGRTGRAGREGYSAS 350
Query: 734 LLAPWEEYFLDDLKDL 749
L++P + F+ D++ +
Sbjct: 351 LVSPDDLKFVADIEKV 366
>gi|452125822|ref|ZP_21938405.1| ATP-dependent RNA helicase [Bordetella holmesii F627]
gi|452129183|ref|ZP_21941759.1| ATP-dependent RNA helicase [Bordetella holmesii H558]
gi|451920917|gb|EMD71062.1| ATP-dependent RNA helicase [Bordetella holmesii F627]
gi|451925053|gb|EMD75193.1| ATP-dependent RNA helicase [Bordetella holmesii H558]
Length = 457
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 136/384 (35%), Positives = 203/384 (52%), Gaps = 35/384 (9%)
Query: 391 IKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTT 450
+K++ GY T +Q + +EG+D + A+TGTGK+ AF +P + ++ +SS +
Sbjct: 2 LKSIAETGYTSPTPIQAQAIPVVVEGRDVMGAAQTGTGKTAAFTVPILHRLMPLANSSAS 61
Query: 451 QLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQI 510
P+ LIL PTRELA Q+ E++ H + + GG + L C+I
Sbjct: 62 PARHPVRALILTPTRELADQVY-ESVKRYSLHTPLRSAVVFGGVDIGPQKEALRRG-CEI 119
Query: 511 LVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQSLL 570
LVATPGRLLDH+E K+ V L + +LVLDEAD +LD+GF D+E I+ LP +RQ LL
Sbjct: 120 LVATPGRLLDHVEQKN---VNLSQVGILVLDEADRMLDMGFLPDLERIIRLLPPQRQGLL 176
Query: 571 FSATMPKELVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILH----------- 619
FSAT E I +G + P++++ + A + QI +
Sbjct: 177 FSATFSNE---------IRKLGRSYLNQPIELEVAARNATADTVTQIAYPMTGDAKRAAV 227
Query: 620 -HLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEFR 678
HL+K L +VIVF +T + T+ L L + ++ K Q R + E F+
Sbjct: 228 VHLVKSRGL----KQVIVFSNTKIGTARLARDLERDGVKAESIHGDKSQADRMKALEAFK 283
Query: 679 ASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLAPW 738
A + +LV +DV+ARG+D V V+ +P + E Y+HR+GRTGR G GE + L P
Sbjct: 284 AGELEVLVATDVAARGLDVAGVPCVINYDLPYNAEDYVHRIGRTGRAGASGEAIALFTPE 343
Query: 739 EEYFLDDLKDL-----PLDKLQLP 757
EE +L D++ L P KL+LP
Sbjct: 344 EERYLLDIEKLIKRQVPRGKLELP 367
>gi|262370602|ref|ZP_06063927.1| conserved hypothetical protein [Acinetobacter johnsonii SH046]
gi|262314402|gb|EEY95444.1| conserved hypothetical protein [Acinetobacter johnsonii SH046]
Length = 640
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 130/379 (34%), Positives = 205/379 (54%), Gaps = 16/379 (4%)
Query: 392 KALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATS----S 447
+AL + G+ T VQE ++ A LEGKD +V ++TG+GK+ AFLLP + A+ +
Sbjct: 16 QALQSLGFTAPTPVQEQSIPAALEGKDLLVSSQTGSGKTAAFLLPTLNALAAQETFVPFK 75
Query: 448 STTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDP 507
+ + +L+LCPTRELA Q++ +AI +++ G + ++GG F ++L+
Sbjct: 76 ERMKAITQPNILVLCPTRELAQQVSQDAIGFVRHMKGARIAAIMGGMPFGKQIQQLKG-- 133
Query: 508 CQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQ 567
Q++VATPGRLLD + + ++L + L++DEAD +LDLGF +D+E I D R+Q
Sbjct: 134 AQVVVATPGRLLDLVNRRQ---IKLDQVDALIVDEADRMLDLGFSEDLEAISDLAANRKQ 190
Query: 568 SLLFSATMPKELVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELH-FQILHHLLKEHI 626
+L+FSAT ++ E D + ++ET H F+ LL H
Sbjct: 191 TLMFSATFAGRIITLAERMMNDPQRI-AIETGHSTNTDITQTLHWTDGFEHKKKLLT-HW 248
Query: 627 LGTPDY-KVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEFRASKRLIL 685
L D + +VF ST T +L L E ++V ++ PQ R+R R + IL
Sbjct: 249 LSAEDVDQAVVFASTQEDTDMLAEELAEAGLSVVALHGAMPQTVRNRRLRSIREGRAKIL 308
Query: 686 VTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLAPWEE---YF 742
V +DV+ARG+D P ++ V+ G+P E Y+HR+GRTGR G+ G+ + L E
Sbjct: 309 VATDVAARGLDVPTISHVINFGLPMKNEDYVHRIGRTGRAGRTGKAITLATYRERGKIRA 368
Query: 743 LDDLKDLPLDKLQLPHLNP 761
L+D D L+ ++ L P
Sbjct: 369 LEDFLDARLNVSEIEGLEP 387
>gi|145351031|ref|XP_001419891.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580124|gb|ABO98184.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 485
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 150/446 (33%), Positives = 239/446 (53%), Gaps = 34/446 (7%)
Query: 391 IKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTT 450
+K + G+ MT VQ + L GKD + A+TG+GK++AFL+P++E + A
Sbjct: 1 MKGIEQMGFKTMTEVQARCVPPLLAGKDVLGAARTGSGKTLAFLVPSVELLYHA------ 54
Query: 451 QLVP--PIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPC 508
+ +P V++L PTRELA QI A L++ H L ++GG + + RL
Sbjct: 55 KFMPRNGTGVMVLSPTRELALQIYNVAQQLMEKHSQTHGL-IIGGANRRAEAERLIKG-V 112
Query: 509 QILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQS 568
+LVATPGRLLDH++N G + LK+ V+DEAD +LD+GF +++ IV LP+ RQ+
Sbjct: 113 NLLVATPGRLLDHMQNTRGFT--FSSLKVFVMDEADRMLDIGFEEEMRTIVKMLPKERQT 170
Query: 569 LLFSATMPKEL-----VLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILHHLLK 623
+LFSAT ++ + + YI +V T ++Q V P E F +L LK
Sbjct: 171 MLFSATQTTKVEDLARLSLKSPIYIGVDDSRAVSTATGVEQGYCVVPSEQRFLLLFTFLK 230
Query: 624 EHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEFRASKRL 683
+++ K++VF S+ LL + + V +++ ++ Q R EF + R
Sbjct: 231 KNL----KKKIMVFFSSCNSVKYHAELLNYIDIPVSDIHGKQKQQRRTTTFFEFCKADRG 286
Query: 684 ILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEG--VLLLAPWEEY 741
+L+ +DV+ARG+D P V ++Q P D ++YIHR+GRT R G +G+G +L L P E
Sbjct: 287 VLLCTDVAARGLDIPAVDWIIQYDPPDDPKEYIHRVGRTAR-GTDGKGRALLFLIPEELS 345
Query: 742 FLDDLKD--LPLDKLQLPHLN-PEIQLQMDNHMAK---IDNNVKEAAYHAWLGYYNSIRE 795
FL LK +PL++ + P +Q Q++ + K + + ++ AY A++ YNS
Sbjct: 346 FLKYLKSAKVPLNEYEFPTKKIANVQSQLEKLVEKNYYLHTSARD-AYRAYILAYNS--H 402
Query: 796 IGRDKTTLVEL-ANKFAQSIGLQRPP 820
+D + L N A S G +PP
Sbjct: 403 TLKDVYNVHALDLNAVASSFGFHKPP 428
>gi|195132627|ref|XP_002010744.1| GI21709 [Drosophila mojavensis]
gi|193907532|gb|EDW06399.1| GI21709 [Drosophila mojavensis]
Length = 804
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 164/500 (32%), Positives = 261/500 (52%), Gaps = 49/500 (9%)
Query: 353 KEISKNKLNGN----GEKKEKREEEPILSQKRFDECGISPLTIKALTAAGYIQMTRVQEA 408
KE+S++KL E + K E + K F + +S T KAL+ A Y T VQ
Sbjct: 37 KELSRSKLAATETEIQELRAKYNEIDPETIKTFAQFPLSQKTQKALSEAKYTTPTEVQRL 96
Query: 409 TLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELA 468
++ L+GKD + A TG+GK++AFL+P +E + S T + +I+ PTRELA
Sbjct: 97 SIGHALQGKDVLGAAITGSGKTLAFLIPVLEHLYMNKWSRTDG----VGAIIISPTRELA 152
Query: 469 SQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGL 528
QI + K HD L ++GG K ++ R+ D C IL+ TPGRLL H++
Sbjct: 153 YQIFETLKKIGKYHDFSAGL-IIGGKNLKFERTRM--DQCNILICTPGRLLQHMDENPLF 209
Query: 529 SVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQSLLFSATMPK------ELVLK 582
+ M ++LVLDEAD LD+GF+K + +I++ P RQ+LLFSAT L LK
Sbjct: 210 NATTM--EVLVLDEADRCLDMGFQKTLNSIIENFPPDRQTLLFSATQTNTVEDLARLNLK 267
Query: 583 REHTYIDTVGLGSVET-----------PVKIKQSCLVAPHELHFQILHHLLKEHILGTPD 631
Y+ SV+T P ++QS +V P E +L +K H+
Sbjct: 268 NP-VYVGYGTAKSVDTKPSGSTAVLALPELLQQSYVVLPLEEKITMLWSFIKNHL----K 322
Query: 632 YKVIVFCSTGMVTSLLYLLLREMK--MNVREMYSRKPQLYRDRISEEFRASKRLILVTSD 689
K+IVF ++ LY + +++ + + +Y Q R I E+F +++ +D
Sbjct: 323 QKIIVFVASCKQAKYLYEIFCKLRPGVGLLALYGTLHQDRRIAIYEDFLRKSHVVMFATD 382
Query: 690 VSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLAPW-EEYFLDDLKD 748
V++RG+D+P V V+Q+ P D QYIHR GR+ R GE +L+L P EEY + LK+
Sbjct: 383 VASRGLDFPSVNWVLQLDCPEDVPQYIHRAGRSARNKSRGECLLVLTPSEEEYMIGALKE 442
Query: 749 -LPLDKLQLPHLNPE----IQLQMDNHMAKIDNNVKEAAYHAWLGYYNSIREIGRDKTTL 803
L LD ++ H++P+ +++++ +A+ ++ +A A+L Y S+ + R+K
Sbjct: 443 QLNLD-IRAVHIDPKKLFSPRVKIEAFLAQFP-ELRASAQRAFLSYLKSVF-LMRNKRLF 499
Query: 804 VELA---NKFAQSIGLQRPP 820
L+ + +AQS+GL P
Sbjct: 500 NVLSLDLDAYAQSLGLAVTP 519
>gi|354580517|ref|ZP_08999422.1| DEAD/DEAH box helicase domain protein [Paenibacillus lactis 154]
gi|353202948|gb|EHB68397.1| DEAD/DEAH box helicase domain protein [Paenibacillus lactis 154]
Length = 529
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 141/396 (35%), Positives = 208/396 (52%), Gaps = 31/396 (7%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
K F + G+ P ++A+T G+ + T +Q ++ L GKD + +A+TGTGK+ AF LP I
Sbjct: 2 KNFADFGLEPRVLQAITELGFEEATPIQSQSIPIALTGKDMIGQAQTGTGKTAAFGLPLI 61
Query: 439 EAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
+ K I L++ PTRELA Q+A E I L GI L + GG
Sbjct: 62 HKIAKEEER--------IVALVMTPTRELAIQVAEE-IGKLSRFKGIRSLAIYGGQDIGR 112
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
R L+ P QI++ TPGRLLDHI K+ +RL ++ +VLDEAD +LD+GF D+++I
Sbjct: 113 QIRALKKKP-QIIIGTPGRLLDHINRKT---IRLDDVQTVVLDEADEMLDMGFMDDIQSI 168
Query: 559 VDCLPRRRQSLLFSATMP-------KELVLKREHTYIDTVGLGSVETPVKIKQSCLVAPH 611
+ +P RQ+LLFSATMP + + EH +V V P+ I Q+ + P
Sbjct: 169 LKLVPENRQTLLFSATMPPNIQKLASQFLKDPEHV---SVIPKHVSAPL-IDQAYIEVPE 224
Query: 612 ELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRD 671
F+ L LL + +P+ IVF T L L++ + ++ Q RD
Sbjct: 225 RQKFEALSRLLD---MESPEL-AIVFGRTKRRVDELAEALQKRGYSADGLHGDLSQHQRD 280
Query: 672 RISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEG 731
+ +FR +LV +DV+ARG+D VT VV +P D E Y+HR+GRTGR GKEG
Sbjct: 281 TVMRKFRDGSIDVLVATDVAARGLDVSGVTHVVNFDLPQDPESYVHRIGRTGRAGKEGTA 340
Query: 732 VLLLAPWEE---YFLDDLKDLPLDKLQLPHLNPEIQ 764
+ P E YF++ + + + LP + I+
Sbjct: 341 WSFVTPREMDHLYFIERVTRHRIPRKPLPTMAEAIE 376
>gi|34498347|ref|NP_902562.1| ATP-dependent RNA helicase [Chromobacterium violaceum ATCC 12472]
gi|34104201|gb|AAQ60560.1| ATP-dependent RNA helicase [Chromobacterium violaceum ATCC 12472]
Length = 439
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 133/357 (37%), Positives = 201/357 (56%), Gaps = 14/357 (3%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F + GI+P ++AL AAGY T VQ + A + G+D +V A+TG+GK+ AFLLPA+
Sbjct: 3 FSDLGIAPTILRALQAAGYENPTAVQAEAVPAAIAGRDLLVSAQTGSGKTAAFLLPALT- 61
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
K + ST + P VL+L PTRELA Q+ A+ K+ + LVGG+ F
Sbjct: 62 --KLSERSTAKGQGP-RVLVLTPTRELAQQVEKNALEYGKDLRWMRTACLVGGSSFGYQI 118
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
R L S P ++VATPGRL+DH+ +SG + L+MLVLDEAD +LD+GF D+E IV
Sbjct: 119 RAL-SRPIDLIVATPGRLMDHM--RSG-RIDFSRLEMLVLDEADRMLDMGFIDDIEAIVK 174
Query: 561 CLPRRRQSLLFSATMPKELVLKREHTYIDT--VGLGSVETPVKIKQSCLVAPHELHFQIL 618
P RQ++LFSAT+ + E D + + ET + L+ +L+ +
Sbjct: 175 ATPETRQTVLFSATLDGIVGRMAEKMTRDPQRIEIARTETSGGTIEEHLLYADDLNHK-- 232
Query: 619 HHLLKEHILGTPDY-KVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEF 677
H L ++IL + + ++F +T + L L + + ++ PQ +R+R +
Sbjct: 233 -HRLLDYILKESGFDQCVIFSATKAYSEELADKLSDQGYSAACLHGDMPQSWRNRTLNDL 291
Query: 678 RASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLL 734
R + +LV +DV+ARG+D P +T VV +P E Y+HR+GRTGR G++G + L
Sbjct: 292 RRGRIKVLVATDVAARGIDVPTITHVVNFDLPKQAEDYVHRIGRTGRAGRDGTAITL 348
>gi|440893673|gb|ELR46355.1| ATP-dependent RNA helicase DDX18 [Bos grunniens mutus]
Length = 671
Score = 210 bits (535), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 154/451 (34%), Positives = 247/451 (54%), Gaps = 41/451 (9%)
Query: 390 TIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSST 449
T+KA+ G+ MT +Q ++ LEG+D + AKTG+GK++AFL+PA+E ++K
Sbjct: 191 TLKAIKEMGFTNMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPAVELIVK------ 244
Query: 450 TQLVP--PIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDP 507
+ +P VLIL PTRELA Q L+ +H L ++GG+ + ++L ++
Sbjct: 245 LKFMPRNGTGVLILSPTRELAMQTFGVLKELMTHHVHTYGL-IMGGSNRSAEAQKL-ANG 302
Query: 508 CQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQ 567
I+VATPGRLLDH++N G + L+ LV+DEAD +LD+GF ++++ I+ LP RRQ
Sbjct: 303 INIVVATPGRLLDHMQNTPGFMYK--NLQCLVIDEADRILDVGFEEELKQIIKLLPTRRQ 360
Query: 568 SLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILHHL 621
++LFSAT ++ + LK+E Y+ + T ++Q +V P E F +L
Sbjct: 361 TMLFSATQTRKVEDLARISLKKEPLYVGVDDDKANATVDGLEQGYVVCPSEKRFLLLFTF 420
Query: 622 LKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEFRASK 681
LK++ K++VF S+ Y LL + + V ++ R+ Q R +F ++
Sbjct: 421 LKKN----RKKKLMVFFSSCKSVKYHYELLNYIDLPVLAIHGRQKQNKRTTTFFQFCSAD 476
Query: 682 RLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEG--VLLLAPWE 739
IL+ +DV+ARG+D P+V +VQ P D ++YIHR+GRT R G G G +L+L P E
Sbjct: 477 SGILLCTDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTAR-GLNGRGHALLILRPEE 535
Query: 740 EYFLDDLKD--LPLDKLQLPHLN-PEIQLQMDNHMAKIDNNVKEAAYHAWLGYYNSIREI 796
FL LK +PL + + +IQ Q++ + K + + ++A A+ Y IR
Sbjct: 536 LGFLRYLKQSKVPLSEFEFSWSKISDIQSQLEKLIEK-NYFLHKSAQEAYKSY---IR-- 589
Query: 797 GRDKTTLVELAN-------KFAQSIGLQRPP 820
D +L ++ N + A S G + PP
Sbjct: 590 AYDSHSLKQIFNVNNLNLPQVALSFGFKVPP 620
>gi|395839602|ref|XP_003792676.1| PREDICTED: ATP-dependent RNA helicase DDX18 [Otolemur garnettii]
Length = 675
Score = 210 bits (534), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 154/451 (34%), Positives = 243/451 (53%), Gaps = 41/451 (9%)
Query: 390 TIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSST 449
T+KA+ G+ MT +Q ++ LEG+D + AKTG+GK++AFL+PA+E ++K
Sbjct: 195 TLKAIKEMGFTNMTEIQHKSIKPLLEGRDLLAAAKTGSGKTLAFLIPAVELIVKL----- 249
Query: 450 TQLVP--PIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDP 507
+ +P VLIL PTRELA Q L+ +H L + GG+ + ++L S+
Sbjct: 250 -KFMPRNGTGVLILSPTRELAMQTFGVLKELMTHHVHTYGLVM-GGSNRSAEAQKL-SNG 306
Query: 508 CQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQ 567
I+VATPGRLLDH++N G + L+ LV+DEAD +LD+GF ++++ I+ LP RRQ
Sbjct: 307 INIIVATPGRLLDHMQNTPGFMYK--NLQCLVIDEADRILDVGFEEELKQIIKLLPTRRQ 364
Query: 568 SLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILHHL 621
++LFSAT ++ + LK+E Y+ + T ++Q +V P E F +L
Sbjct: 365 TMLFSATQTRKVEDLARISLKKEPLYVGVDDDKTNATVDGLEQGYVVCPSEKRFLLLFTF 424
Query: 622 LKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEFRASK 681
LK++ K++VF S+ Y LL + + V ++ ++ Q R +F +
Sbjct: 425 LKKN----RKKKLMVFFSSCKSVKYHYELLNYIDLTVLAIHGKQKQNKRTTTFFQFCNAD 480
Query: 682 RLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEG--VLLLAPWE 739
IL+ +DV+ARG+D P+V +VQ P D ++YIHR+GRT R G G G +L+L P E
Sbjct: 481 SGILLCTDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTAR-GLNGRGHALLILRPEE 539
Query: 740 EYFLDDLKD--LPLDKLQLPHLN-PEIQLQMDNHMAKIDNNVKEAAYHAWLGYYNSIREI 796
FL LK +PL + IQ Q++ + K + + ++A A+ Y IR
Sbjct: 540 LGFLRYLKQSKVPLSEFDFSWSKISNIQSQLEQLIEK-NYFLHKSAQEAYKSY---IR-- 593
Query: 797 GRDKTTLVELAN-------KFAQSIGLQRPP 820
D +L ++ N + A S G + PP
Sbjct: 594 AYDSHSLKQIFNVHNLNLPQVALSFGFKVPP 624
>gi|426221192|ref|XP_004004794.1| PREDICTED: ATP-dependent RNA helicase DDX18 [Ovis aries]
Length = 670
Score = 210 bits (534), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 154/451 (34%), Positives = 246/451 (54%), Gaps = 41/451 (9%)
Query: 390 TIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSST 449
T+KA+ G+ MT +Q ++ LEG+D + AKTG+GK++AFL+PA+E ++K
Sbjct: 190 TLKAIKEMGFTNMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPAVELIVK------ 243
Query: 450 TQLVP--PIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDP 507
+ +P VLIL PTRELA Q L+ +H L ++GG+ + ++L ++
Sbjct: 244 LKFMPRNGTGVLILSPTRELAMQTFGVLKELMTHHVHTYGL-IMGGSNRSAEAQKL-ANG 301
Query: 508 CQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQ 567
I+VATPGRLLDH++N G + L+ LV+DEAD +LD+GF ++++ I+ LP RRQ
Sbjct: 302 INIVVATPGRLLDHMQNTPGFMYK--NLQCLVIDEADRILDVGFEEELKQIIKLLPTRRQ 359
Query: 568 SLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILHHL 621
++LFSAT ++ + LK+E Y+ + T ++Q +V P E F +L
Sbjct: 360 TMLFSATQTRKVEDLARISLKKEPLYVGVDDDKANATVDGLEQGYVVCPSEKRFLLLFTF 419
Query: 622 LKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEFRASK 681
LK++ K++VF S+ Y LL + + V ++ R+ Q R +F +
Sbjct: 420 LKKN----RKKKLMVFFSSCKSVKYHYELLNYIDLPVMAIHGRQKQNKRTTTFFQFCNAD 475
Query: 682 RLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEG--VLLLAPWE 739
IL+ +DV+ARG+D P+V +VQ P D ++YIHR+GRT R G G G +L+L P E
Sbjct: 476 SGILLCTDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTAR-GLNGRGHALLILRPEE 534
Query: 740 EYFLDDLKD--LPLDKLQLPHLN-PEIQLQMDNHMAKIDNNVKEAAYHAWLGYYNSIREI 796
FL LK +PL + + +IQ Q++ + K + + ++A A+ Y IR
Sbjct: 535 LGFLRYLKQSKVPLSEFEFSWSKISDIQSQLEKLIEK-NYFLHKSAQEAYKSY---IR-- 588
Query: 797 GRDKTTLVELAN-------KFAQSIGLQRPP 820
D +L ++ N + A S G + PP
Sbjct: 589 AYDSHSLKQIFNVNNLNLPQVALSFGFKVPP 619
>gi|395324246|gb|EJF56690.1| DEAD-domain-containing protein [Dichomitus squalens LYAD-421 SS1]
Length = 798
Score = 210 bits (534), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 148/464 (31%), Positives = 244/464 (52%), Gaps = 28/464 (6%)
Query: 373 EPILSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIA 432
EP K F + IS LT + L A ++ MT +Q ++ L+GKD + A+TG+GK++A
Sbjct: 48 EPPSDLKAFADLPISDLTKRGLKRAHFVDMTDIQSKSIPTSLKGKDVLGAARTGSGKTLA 107
Query: 433 FLLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVG 492
FL+P +E + + L LI+ PTRELA+QI E + + + ++G
Sbjct: 108 FLIPVLEILYRRKWGPQDGL----GALIITPTRELAAQIF-EVLRSIGGYHSFSAGLIIG 162
Query: 493 GTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFR 552
G K ++ RL ILVATPGRLL H++ G L++LVLDEAD +LD+GF+
Sbjct: 163 GKNLKDERERLSR--MNILVATPGRLLQHMDQTIGFECD--NLQLLVLDEADRILDMGFQ 218
Query: 553 KDVENIVDCLPRRRQSLLFSATMPKELVLKREHTYIDTVGLGSVET------PVKIKQSC 606
+ + ++ LP+ RQ+LLFSAT + + + D V +G ET P ++Q
Sbjct: 219 RTLAALLSHLPKSRQTLLFSATQTQSVADLARLSLKDPVPVGIEETLTEGATPKALEQHY 278
Query: 607 LVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNV--REMYSR 664
+V + +L +K H+ K +VF S+ ++ +M V +++ +
Sbjct: 279 VVCELDKKLDVLWSFIKSHL----QTKTLVFLSSCKQVRFVFETFCKMHPGVPLLQLHGK 334
Query: 665 KPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGR 724
+ Q+ R + F + K +L +D++ARG+D+P V V+QV P D + YIHR+GRT R
Sbjct: 335 QKQMTRLETFKRFTSMKHAVLFATDIAARGLDFPSVDWVLQVDAPEDADTYIHRVGRTAR 394
Query: 725 EGKEGEGVLLLAPWEEY-FLDDL--KDLPLDKLQLPHLNPEIQLQMDNHMAKIDNNVKEA 781
G+G+LLLAP EE L L K++ + K+++ + ++A D +K
Sbjct: 395 YESAGKGLLLLAPSEEEGMLAALKKKNIEVQKIKIKASKTQSIANSLQNLAFQDPEIKYL 454
Query: 782 AYHAWLGYYNSIREIGRDKTT--LVEL-ANKFAQSIGLQRPPPL 822
A++ Y S+ + +DK+ L EL +F++++GL P +
Sbjct: 455 GQRAFVSYLRSVY-LQKDKSIFKLNELPVERFSEALGLPGMPKI 497
>gi|431894767|gb|ELK04560.1| ATP-dependent RNA helicase DDX18 [Pteropus alecto]
Length = 663
Score = 210 bits (534), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 144/418 (34%), Positives = 232/418 (55%), Gaps = 30/418 (7%)
Query: 390 TIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSST 449
T+KA+ G+ MT +Q ++ LEG+D + AKTG+GK++AFL+PA+E ++K
Sbjct: 183 TLKAIKEMGFTNMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPAVELIVKL----- 237
Query: 450 TQLVP--PIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDP 507
+ +P +LIL PTRELA Q L+ +H L + GG+ + ++L ++
Sbjct: 238 -KFMPRNGTGILILSPTRELAMQTFGVLKELMTHHVHTYGLVM-GGSNRSAEAQKL-ANG 294
Query: 508 CQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQ 567
I+VATPGRLLDH++N G + L+ LV+DEAD +LD+GF ++++ I+ LP RRQ
Sbjct: 295 INIIVATPGRLLDHMQNTPGFMYK--NLQCLVIDEADRILDVGFEEELKQIIKLLPTRRQ 352
Query: 568 SLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILHHL 621
++LFSAT ++ + LK+E Y+ + T ++Q +V P E F +L
Sbjct: 353 TMLFSATQTRKVEDLARISLKKEPLYVGVDDDKANATVDGLEQGYVVCPSEKRFLLLFTF 412
Query: 622 LKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEFRASK 681
LK++ K++VF S+ Y LL + + V ++ R+ Q R +F +
Sbjct: 413 LKKN----RKKKLMVFFSSCKSVKYHYELLNYIDLPVLAIHGRQKQNKRTTTFFQFCNAD 468
Query: 682 RLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEG--VLLLAPWE 739
IL+ +DV+ARG+D P+V +VQ P D ++YIHR+GRT R G G G +L+L P E
Sbjct: 469 TGILLCTDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTAR-GLNGRGHALLILRPEE 527
Query: 740 EYFLDDLKD--LPLDKLQLPHLN-PEIQLQMDNHMAK--IDNNVKEAAYHAWLGYYNS 792
FL LK +PL + + +IQ Q++ + K + + AY +++ Y+S
Sbjct: 528 LGFLRYLKQSKVPLSEFEFSWSKISDIQSQLEKLIEKNYFLHKSAQEAYKSYIRAYDS 585
>gi|349573623|ref|ZP_08885599.1| ATP-dependent RNA helicase RhlE [Neisseria shayeganii 871]
gi|348014782|gb|EGY53650.1| ATP-dependent RNA helicase RhlE [Neisseria shayeganii 871]
Length = 456
Score = 210 bits (534), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 130/371 (35%), Positives = 206/371 (55%), Gaps = 10/371 (2%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F G+SP +AL+ GY Q T +Q A + L G D + A+TGTGK+ AF+LP +E
Sbjct: 4 FASLGLSPEITEALSEQGYEQPTAIQSAAIPKVLAGHDLLAAAQTGTGKTAAFMLPGLER 63
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+ + ++ST+ + P+ +L+L PTRELA QI A +KN + L GG
Sbjct: 64 LKRYANASTSPAMHPVRMLVLTPTRELADQIDQNTSAYIKNLP-LRHTVLFGGVNMDKQT 122
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
+ L S C+I+VAT GRLLDH++ K ++RL ++++VLDEAD +LD+GF D+ I+
Sbjct: 123 QSLRSG-CEIVVATVGRLLDHVQQK---NIRLDKVEIVVLDEADRMLDMGFIDDIRRIMQ 178
Query: 561 CLPRRRQSLLFSATMPKELVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILH- 619
LP++RQ+LLFSAT + K +++ VET + + V H + +
Sbjct: 179 MLPKQRQTLLFSATFSPP-IRKLAQDFMNQP--EQVETAPQNTTNANVEQHIIAIDTMQK 235
Query: 620 -HLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEFR 678
+LL+ I+ +VIVFC T + L +++ ++ K Q R +F+
Sbjct: 236 RNLLERLIVDLNMNQVIVFCKTKQSVDQVARDLVRRQLSAAALHGDKSQQSRLETLSDFK 295
Query: 679 ASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLAPW 738
A + +LV +DV+ARG+D ++ V+ +P E Y+HR+GRTGR G EG + L+
Sbjct: 296 AGQLRVLVATDVAARGLDIAELPFVINYEMPSQAEDYVHRIGRTGRAGAEGVAISLMDED 355
Query: 739 EEYFLDDLKDL 749
E+ + +K+L
Sbjct: 356 EQKMFESIKEL 366
>gi|328848641|gb|EGF97845.1| hypothetical protein MELLADRAFT_46164 [Melampsora larici-populina
98AG31]
Length = 659
Score = 210 bits (534), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 152/473 (32%), Positives = 236/473 (49%), Gaps = 31/473 (6%)
Query: 364 GEKKEKREEEPILSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKA 423
E ++P++++ F +SP T KA+ G+ MT VQ T+ + G+D + A
Sbjct: 114 AESSASASDKPLVTE--FTSLNLSPGTAKAIEEMGFKHMTEVQARTIPPLMTGRDVLGAA 171
Query: 424 KTGTGKSIAFLLPAIEAVLKATSSSTTQLVP--PIYVLILCPTRELASQIAAEAIALLKN 481
+TG+GK++AFL+PA+E + S Q P +I+ PTRELA QI A L+K+
Sbjct: 172 RTGSGKTLAFLVPAVEML------SRLQFKPRNGTGAIIVSPTRELALQIFGVAQELMKH 225
Query: 482 HDGIGVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLD 541
H +T +GG K + +L +L++TPGRLLDH++N G LK L++D
Sbjct: 226 HSQTFAIT-IGGANRKAEAEKLIKG-VNLLISTPGRLLDHLQNTKGFV--FSNLKALIID 281
Query: 542 EADHLLDLGFRKDVENIVDCLP-RRRQSLLFSATMPKE------LVLKREHTYIDTVGLG 594
EAD +L++GF ++ I+ LP RQS+LFSAT + + L+ YI+
Sbjct: 282 EADRILEIGFEDEMRKIISLLPSENRQSMLFSATQTTKVQDLARISLRPGPLYINVDANK 341
Query: 595 SVETPVKIKQSCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREM 654
T ++Q +V E F +L LK+ + + KVIVF S+ LL +
Sbjct: 342 QDATVQGLEQGYVVCESEKRFLLLFTFLKKSL----NKKVIVFFSSCNSVKYHGELLNYI 397
Query: 655 KMNVREMYSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQ 714
+ +++ ++ Q R EF + IL+ +DV+ARG+D P V ++Q P D
Sbjct: 398 DIPALDLHGKQKQQKRTNTFFEFCNAPTGILLCTDVAARGLDIPKVDWIIQFDPPDDPRD 457
Query: 715 YIHRLGRTGREGKEGEGVLLLAPWEEYFLDDLK--DLPLDKLQLPHLN-PEIQLQMDNHM 771
YIHR+GRT R GK G +L L P E FL LK +PL++ P +Q Q+ +
Sbjct: 458 YIHRVGRTARAGKSGRSLLFLLPSELGFLRFLKLAKVPLNEYSFPTDKLANVQTQLTKLI 517
Query: 772 AKIDNNVKEAAYHAWLGYYNSIREIGRDKTTLVEL--ANKFAQSIGLQRPPPL 822
+K + + ++A + Y S K V NK Q+ G PP +
Sbjct: 518 SK-NYYLNQSARDGFRSYIQSYASYSLKKIFNVNSLDLNKVGQAFGFTVPPAV 569
>gi|315648503|ref|ZP_07901602.1| DEAD/DEAH box helicase domain protein [Paenibacillus vortex V453]
gi|315276197|gb|EFU39543.1| DEAD/DEAH box helicase domain protein [Paenibacillus vortex V453]
Length = 536
Score = 210 bits (534), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 141/396 (35%), Positives = 209/396 (52%), Gaps = 31/396 (7%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
K F + G+ P ++A+T G+ + T +Q ++ L G+D + +A+TGTGK+ AF LP I
Sbjct: 2 KNFADFGLEPRVLQAITELGFEEATPIQSQSIPIALTGRDMIGQAQTGTGKTAAFGLPLI 61
Query: 439 EAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
+ K I LI+ PTRELA Q+A E I L GI L + GG
Sbjct: 62 HKIAKEEER--------IVSLIMTPTRELAIQVAEE-IGKLSRFKGIRSLAIYGGQDIGR 112
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
R L+ P QI++ TPGRLLDHI K+ +RL ++ +VLDEAD +LD+GF +D+++I
Sbjct: 113 QIRALKKKP-QIIIGTPGRLLDHINRKT---IRLDDVQTVVLDEADEMLDMGFMEDIQSI 168
Query: 559 VDCLPRRRQSLLFSATMP-------KELVLKREHTYIDTVGLGSVETPVKIKQSCLVAPH 611
+ +P RQ+LLFSATMP + + EH +V V P+ I Q+ + P
Sbjct: 169 LKLVPEERQTLLFSATMPANIQKLASQFLKDPEHV---SVIPKHVSAPL-IDQAYIEVPE 224
Query: 612 ELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRD 671
F+ L LL + +P+ IVF T L L++ + ++ Q RD
Sbjct: 225 RQKFEALSRLLD---MESPEL-AIVFGRTKRRVDELAEALQKRGYSADGLHGDLSQHQRD 280
Query: 672 RISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEG 731
+ +FR +LV +DV+ARG+D VT VV +P D E Y+HR+GRTGR GKEG
Sbjct: 281 TVMRKFRDGSIDVLVATDVAARGLDVSGVTHVVNFDLPQDPESYVHRIGRTGRAGKEGTA 340
Query: 732 VLLLAPWEE---YFLDDLKDLPLDKLQLPHLNPEIQ 764
+ P E YF++ + + + LP + I+
Sbjct: 341 WSFVTPREMDHLYFIERVTRHRIPRKPLPTIAEAIE 376
>gi|422324246|ref|ZP_16405283.1| hypothetical protein HMPREF0737_00393 [Rothia mucilaginosa M508]
gi|353344302|gb|EHB88614.1| hypothetical protein HMPREF0737_00393 [Rothia mucilaginosa M508]
Length = 752
Score = 210 bits (534), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 143/421 (33%), Positives = 216/421 (51%), Gaps = 18/421 (4%)
Query: 380 RFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIE 439
RF + G+ P + AL GY + + +QE T+ L+G D V A+TGTGK+ AF LPA+
Sbjct: 81 RFTDLGLDPRVLAALEEVGYEKPSPIQEQTIPLLLDGHDVVGLAQTGTGKTAAFALPALS 140
Query: 440 AVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNH-DGIGVLTLVGGTRFKV 498
+ A + + VL+L PTRELA Q+A EA + H + VL + GG+ +
Sbjct: 141 RM--AELADINGVSRDTQVLVLAPTRELALQVA-EAFSSYATHMEDFTVLPIYGGSPYGP 197
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
L Q++V TPGR++DH+E S + L L+ LVLDEAD +L +GF +DVE I
Sbjct: 198 QLAGLRRG-AQVVVGTPGRVIDHLEKGS---LDLSNLQYLVLDEADEMLRMGFAEDVEKI 253
Query: 559 VDCLPRRRQSLLFSATMPKELVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQIL 618
++ P +Q LFSATMP + K Y++ VE VK K + + + Q++
Sbjct: 254 LEGTPDSKQVALFSATMPNS-IRKIAQQYLND----PVEVRVKAKTTTSANISQRYMQVM 308
Query: 619 H-HLLKE--HILGTPDYK-VIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRIS 674
H H L +L +Y +IVF T T + L+ + PQ R+R
Sbjct: 309 HSHKLDAMTRVLEVENYDGIIVFVRTKKETEEVADKLKARGFAAAAINGDIPQQLRERTV 368
Query: 675 EEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLL 734
+ R + ILV +DV+ARG+D ++ VV IP D E Y+HR+GRTGR G+EG +L
Sbjct: 369 DALRDGRIDILVATDVAARGLDVERISLVVNYDIPHDTESYVHRIGRTGRAGREGAAILF 428
Query: 735 LAPWEEYFLDDLKDLPLDKLQLPHLNPEIQLQMDNHMAKIDNNVKEAAYHAWLGYYNSIR 794
+ P E+Y L ++ K++ H+ P + + + + E L ++ I
Sbjct: 429 VTPREKYMLRQIEKATRQKVEPMHM-PTAEAVNETRKQRFAQQITETIESEDLSFFRQII 487
Query: 795 E 795
E
Sbjct: 488 E 488
>gi|426336942|ref|XP_004031710.1| PREDICTED: ATP-dependent RNA helicase DDX18 [Gorilla gorilla
gorilla]
Length = 670
Score = 210 bits (534), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 152/448 (33%), Positives = 246/448 (54%), Gaps = 35/448 (7%)
Query: 390 TIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSST 449
T+KA+ G+ MT +Q ++ LEG+D + AKTG+GK++AFL+PA+E ++K
Sbjct: 190 TLKAIKEMGFTNMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPAVELIVK------ 243
Query: 450 TQLVP--PIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDP 507
+ +P VLIL PTRELA Q L+ +H L ++GG+ + ++L ++
Sbjct: 244 LRFMPRNGTGVLILSPTRELAMQTFGVLKELMTHHVHTYGL-IMGGSNRSAEAQKL-ANG 301
Query: 508 CQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQ 567
I+VATPGRLLDH++N G + L+ LV+DEAD +LD+GF ++++ I+ LP RRQ
Sbjct: 302 INIIVATPGRLLDHMQNTPGFMYK--NLQCLVIDEADRILDVGFEEELKQIIKLLPTRRQ 359
Query: 568 SLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILHHL 621
++LFSAT ++ + LK+E Y+ + T ++Q +V P E F +L
Sbjct: 360 TMLFSATQTRKVEDLARISLKKEPLYVGVDDDKANATVDGLEQGYVVCPSEKRFLLLFTF 419
Query: 622 LKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEFRASK 681
LK++ K++VF S+ M Y LL + + V ++ ++ Q R +F +
Sbjct: 420 LKKN----RKKKLMVFFSSCMSVKYHYELLNYIDLPVLAIHGKQKQNKRTTTFFQFCNAD 475
Query: 682 RLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEG--VLLLAPWE 739
L+ +DV+ARG+D P+V +VQ P D ++YIHR+GRT R G G G +L+L P E
Sbjct: 476 SGTLLCTDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTAR-GLNGRGHALLILRPEE 534
Query: 740 EYFLDDLKD--LPLDKLQLPHLN-PEIQLQMDNHMAK--IDNNVKEAAYHAWLGYYN--S 792
FL LK +PL + +IQ Q++ + K + + AY +++ Y+ S
Sbjct: 535 LGFLRYLKQSKVPLSEFDFSWSKISDIQSQLEKLIEKNYFLHKSAQEAYKSYIRAYDSHS 594
Query: 793 IREIGRDKTTLVELANKFAQSIGLQRPP 820
+++I + LA + A S G + PP
Sbjct: 595 LKQIFNVNN--LNLA-QVALSFGFKVPP 619
>gi|302665680|ref|XP_003024449.1| hypothetical protein TRV_01412 [Trichophyton verrucosum HKI 0517]
gi|291188502|gb|EFE43838.1| hypothetical protein TRV_01412 [Trichophyton verrucosum HKI 0517]
Length = 816
Score = 210 bits (534), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 160/498 (32%), Positives = 251/498 (50%), Gaps = 43/498 (8%)
Query: 367 KEKREEEPILSQKR-------------FDECGISPLTIKALTAAGYIQMTRVQEATLSAC 413
K KR E+ I S K+ F + +S T L+A+ + ++T +Q +
Sbjct: 25 KRKRNEDDIASLKQRVAELDTKAVIESFTDLPLSEPTRLGLSASHFKELTDIQSRAIPHA 84
Query: 414 LEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAA 473
L+G+D + AKTG+GK++AFL+P +E + + + L LI+ PTRELA QI
Sbjct: 85 LQGRDILGAAKTGSGKTLAFLVPVLENLYRKQWTEYDGLG----ALIISPTRELAIQIF- 139
Query: 474 EAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLM 533
E + + + ++GG + +Q RL ILV TPGR+L H++ +
Sbjct: 140 EVLRKIGRYHTFSAGLVIGGKSLQEEQERLGR--MNILVCTPGRMLQHMDQTAAFDT--G 195
Query: 534 GLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQSLLFSATMPKEL-----VLKREHTYI 588
++MLVLDEAD ++D+GF+ V+ IV+ LP+ RQ++LFSAT K++ + ++ YI
Sbjct: 196 NIQMLVLDEADRIMDMGFQSTVDAIVEHLPKERQTMLFSATQTKKVSDLARLSLQDPEYI 255
Query: 589 DTVGLGSVETPVKIKQSCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLY 648
S TP ++Q +V P L ++ + K+IVF S+ +Y
Sbjct: 256 SVHQTASSATPSTLQQHYVVTPLPDKLDTLWSFIRSSLKS----KIIVFFSSSKEVRFVY 311
Query: 649 LLLREMKMNV--REMYSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQV 706
R+M+ + ++ R+ Q R I+ +F ASK L +DV ARG+D+P V V+Q+
Sbjct: 312 EAFRQMQPGIPLLHLHGRQKQGARLDITHKFSASKNSCLFATDVVARGLDFPAVDWVIQL 371
Query: 707 GIPPDREQYIHRLGRTGREGKEGEGVLLLAPWEEY-FLDDL--KDLPLDKLQL-PHLNPE 762
P D + YIHR+GRT R + G VL L P EE L L K +P++K+ + +
Sbjct: 372 DCPEDSDTYIHRVGRTARYERNGRAVLFLDPSEEIGMLSRLEQKKIPIEKINIRANKQQS 431
Query: 763 IQLQMDNHMAKIDNNVKEAAYHAWLGYYNSIREIGRDKTTLVELA---NKFAQSIGLQRP 819
I+ Q+ N M D +K A+ Y SI I +DK A ++A S+GL
Sbjct: 432 IKHQLQN-MCFKDPQLKYLGQKAFTSYVKSIH-IQKDKEVFDVKALPLEEYAASLGLPGA 489
Query: 820 PPL-FRKTALKMGLKDIP 836
P + F K LK+ P
Sbjct: 490 PRIKFIKGEDTKSLKNAP 507
>gi|242798281|ref|XP_002483137.1| ATP-dependent RNA helicase, putative [Talaromyces stipitatus ATCC
10500]
gi|218716482|gb|EED15903.1| ATP-dependent RNA helicase, putative [Talaromyces stipitatus ATCC
10500]
Length = 591
Score = 210 bits (534), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 155/459 (33%), Positives = 241/459 (52%), Gaps = 36/459 (7%)
Query: 380 RFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIE 439
+F E +S T++A+ G+ MT +Q+ + + G+D + AKTG+GK++AFL+PAIE
Sbjct: 113 KFTELNLSDRTLEAIKEMGFETMTEIQQRAIPPLMAGRDVLGAAKTGSGKTLAFLIPAIE 172
Query: 440 AV--LKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFK 497
+ LK + T VLIL PTRELA QI A LL+ H + + G R +
Sbjct: 173 LLHSLKFKPRNGTG------VLILSPTRELALQIWGVARQLLEKHSQTHGIVMGGANR-R 225
Query: 498 VDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVEN 557
+ +LE +LVATPGRLLDH++N G + L+ LV+DEAD +L++GF +++
Sbjct: 226 AEAEKLEKG-VNLLVATPGRLLDHLQNTKGFVFK--NLRQLVIDEADRILEIGFEDEMKQ 282
Query: 558 IVDCLPR-RRQSLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSCLVAP 610
I+ L RQ+ LFSAT + + LK YI+ V T +++Q +V
Sbjct: 283 IMKILGNGERQTSLFSATQTTKVEDLARISLKPGPLYINVVPRMENATVDRLEQGYVVCE 342
Query: 611 HELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYR 670
+ F +L LK ++ K+IVF S+ + LL + + V ++ ++ Q R
Sbjct: 343 PDKRFLLLFSFLKRNL----KKKIIVFLSSCNSVNYYSELLNYIDLPVLSIHGKQKQQKR 398
Query: 671 DRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGK-EG 729
EF S+R IL+ +DV+ARG+D P++ VVQ P D YIHR+GRT R K +G
Sbjct: 399 TSTFFEFVNSERGILICTDVAARGLDIPEIDYVVQYDPPDDPRDYIHRVGRTARGAKAKG 458
Query: 730 EGVLLLAPWEEYFLDDLKD--LPLDKLQLPH---LNPEIQLQMDNHMAKIDNNVKEAAYH 784
++ L P E FL LK+ +P+ + + P +N + QL+ N + Y
Sbjct: 459 RSLMFLQPSEMGFLTHLKEAKVPVVEFEFPQKKIINVQSQLEKLISQNYYLNKSAKEGYR 518
Query: 785 AWLGYY--NSIREI-GRDKTTLVELANKFAQSIGLQRPP 820
+++ Y +S+R + +K LV K A+S G PP
Sbjct: 519 SYINAYASHSLRSVFDVNKLDLV----KIAKSFGFSTPP 553
>gi|255319837|ref|ZP_05361042.1| DEAD/DEAH box helicase [Acinetobacter radioresistens SK82]
gi|262380369|ref|ZP_06073523.1| conserved hypothetical protein [Acinetobacter radioresistens SH164]
gi|255303156|gb|EET82368.1| DEAD/DEAH box helicase [Acinetobacter radioresistens SK82]
gi|262297815|gb|EEY85730.1| conserved hypothetical protein [Acinetobacter radioresistens SH164]
Length = 618
Score = 210 bits (534), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 129/379 (34%), Positives = 205/379 (54%), Gaps = 19/379 (5%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
K F E + +ALT G+ T VQE + A LEGKD +V ++TG+GK+ AFLLP +
Sbjct: 3 KTFAEFSLHESLTQALTDLGFTAPTAVQEQAIPAALEGKDLLVSSQTGSGKTAAFLLPTL 62
Query: 439 EAVLKATS----SSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGT 494
A+ + + V +L++ PTRELA Q+ +AIAL+++ G+ + ++GG
Sbjct: 63 NALADQDTFLPFKERMRAVTQPNILVISPTRELAQQVCQDAIALVRHMKGVRIAAIMGGM 122
Query: 495 RFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKD 554
F ++L+ Q++VATPGRLLD + + ++L + L++DEAD +LDLGF +D
Sbjct: 123 PFGKQIQQLKG--AQVVVATPGRLLDLVNRRQ---IKLDKVDALIVDEADRMLDLGFSED 177
Query: 555 VENIVDCLPRRRQSLLFSATMPKELVLKREHTYIDTVGLGSVETPVKIKQSCLVAPH--- 611
+E I + R+Q+L+FSAT ++ E D + + ++ET H
Sbjct: 178 LEAISELALNRKQTLMFSATFADRIIRLAECMMKDPMRI-AIETGHSTNTDITQTLHWTD 236
Query: 612 --ELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLY 669
E ++L H L++ L + +VF ST T +L L E +V ++ PQ
Sbjct: 237 GFEHKKKLLTHWLEDETLD----QAVVFASTQEDTDMLAEELAEAGHSVVALHGAMPQTV 292
Query: 670 RDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEG 729
R+R R + ILV +DV+ARG+D P ++ V+ G+P E Y+HR+GRTGR G+ G
Sbjct: 293 RNRRLRSIREGRAKILVATDVAARGLDVPTISHVINFGLPMKHEDYVHRIGRTGRAGRTG 352
Query: 730 EGVLLLAPWEEYFLDDLKD 748
+ + L E + L+D
Sbjct: 353 KAITLATYRERGKIRALED 371
>gi|255718187|ref|XP_002555374.1| KLTH0G07766p [Lachancea thermotolerans]
gi|238936758|emb|CAR24937.1| KLTH0G07766p [Lachancea thermotolerans CBS 6340]
Length = 764
Score = 210 bits (534), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 149/464 (32%), Positives = 238/464 (51%), Gaps = 41/464 (8%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F + +S T+K L + +I+MT +Q+ ++ L+G D + AKTG+GK++AFL+P IE
Sbjct: 43 FKDLPLSHQTLKGLRDSAFIKMTEIQKMSIPVSLKGHDLLAAAKTGSGKTLAFLIPVIEK 102
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+ + + L LI+ PTRELA Q E + + + ++GG K +
Sbjct: 103 LYREKWTEFDGL----GALIISPTRELAMQ-TYEVLTKIGRYTSFSAGLVIGGKEVKFEL 157
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
R+ ILV TPGR+L H++ GL+ L++LVLDEAD LD+GF+K ++ IV
Sbjct: 158 DRISK--INILVGTPGRILQHMDQAVGLNTS--NLQVLVLDEADRCLDMGFKKTLDAIVM 213
Query: 561 CLPRRRQSLLFSATMPKELVLKREHTYIDTVGLGSVE---------TPVKIKQSCLVAPH 611
LP RQ+LLFSAT + L + D +G+ E TP ++QS +
Sbjct: 214 NLPPVRQTLLFSATQSQSLADLARLSLTDYKSVGTAEVKDDSNSSATPDTLQQSYISVEL 273
Query: 612 ELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK--MNVREMYSRKPQLY 669
IL +K H+ K+IVF S+ +Y R+++ +++ ++ R+ Q
Sbjct: 274 PDKLDILFSFIKTHL----KCKMIVFLSSSKQVHFVYETFRKLQPGISLMHLHGRQKQTA 329
Query: 670 RDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEG 729
R ++F ++ L +DV ARG+D+P V VVQ P + + YIHR+GR+ R GK+G
Sbjct: 330 RTETLDKFSRAQHTCLFATDVVARGIDFPAVDWVVQADCPENVDTYIHRVGRSARYGKQG 389
Query: 730 EGVLLLAPWEEY-FLDDLKD-------LPLDKLQLPHLNPEIQLQMDNHMAKIDNNVKEA 781
+ +++L P EE FL LK L + + + + P++Q + D +K
Sbjct: 390 KSLVMLTPQEEEGFLKRLKQRHIEPNKLTIKQSRKKSIKPQLQSLLFQ-----DPELKYL 444
Query: 782 AYHAWLGYYNSIREIGRDKTTLV--EL-ANKFAQSIGLQRPPPL 822
A++ Y SI I +DK EL +FA S+GL P +
Sbjct: 445 GQKAFISYVRSIF-IQKDKEVFKFEELPTEEFANSLGLPGAPKI 487
>gi|421855299|ref|ZP_16287679.1| putative ATP-dependent RNA helicase [Acinetobacter radioresistens
DSM 6976 = NBRC 102413]
gi|403189310|dbj|GAB73880.1| putative ATP-dependent RNA helicase [Acinetobacter radioresistens
DSM 6976 = NBRC 102413]
Length = 622
Score = 210 bits (534), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 129/379 (34%), Positives = 205/379 (54%), Gaps = 19/379 (5%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
K F E + +ALT G+ T VQE + A LEGKD +V ++TG+GK+ AFLLP +
Sbjct: 3 KTFAEFSLHESLTQALTDLGFTAPTAVQEQAIPAALEGKDLLVSSQTGSGKTAAFLLPTL 62
Query: 439 EAVLKATS----SSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGT 494
A+ + + V +L++ PTRELA Q+ +AIAL+++ G+ + ++GG
Sbjct: 63 NALADQDTFLPFKERMRAVTQPNILVISPTRELAQQVCQDAIALVRHMKGVRIAAIMGGM 122
Query: 495 RFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKD 554
F ++L+ Q++VATPGRLLD + + ++L + L++DEAD +LDLGF +D
Sbjct: 123 PFGKQIQQLKG--AQVVVATPGRLLDLVNRRQ---IKLDKVDALIVDEADRMLDLGFSED 177
Query: 555 VENIVDCLPRRRQSLLFSATMPKELVLKREHTYIDTVGLGSVETPVKIKQSCLVAPH--- 611
+E I + R+Q+L+FSAT ++ E D + + ++ET H
Sbjct: 178 LEAISELALNRKQTLMFSATFADRIIRLAECMMKDPMRI-AIETGHSTNTDITQTLHWTD 236
Query: 612 --ELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLY 669
E ++L H L++ L + +VF ST T +L L E +V ++ PQ
Sbjct: 237 GFEHKKKLLTHWLEDETLD----QAVVFASTQEDTDMLAEELAEAGHSVVALHGAMPQTV 292
Query: 670 RDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEG 729
R+R R + ILV +DV+ARG+D P ++ V+ G+P E Y+HR+GRTGR G+ G
Sbjct: 293 RNRRLRSIREGRAKILVATDVAARGLDVPTISHVINFGLPMKHEDYVHRIGRTGRAGRTG 352
Query: 730 EGVLLLAPWEEYFLDDLKD 748
+ + L E + L+D
Sbjct: 353 KAITLATYRERGKIRALED 371
>gi|134297916|ref|YP_001111412.1| DEAD/DEAH box helicase [Desulfotomaculum reducens MI-1]
gi|134050616|gb|ABO48587.1| DEAD/DEAH box helicase domain protein [Desulfotomaculum reducens
MI-1]
Length = 460
Score = 210 bits (534), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 138/360 (38%), Positives = 191/360 (53%), Gaps = 20/360 (5%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F + GI + L G + T +Q+ T+ L GKD + +A+TGTGK++AF+LP +E
Sbjct: 4 FLQLGIRRELNELLRVYGITEPTPIQKQTIPILLSGKDVIAQAQTGTGKTLAFVLPILEK 63
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+ S I LIL PTRELA QI E L D VL + GG +
Sbjct: 64 IDAKKSY--------IQALILTPTRELALQITTEVKKLASKMDA-NVLAVYGGQDVERQN 114
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
+RL+ + I++ATPGRLLDH+ + +RL G+ MLVLDEAD +L +GF +VE I+
Sbjct: 115 KRLQGN-THIVIATPGRLLDHLGRGT---IRLTGVSMLVLDEADQMLHMGFLNEVEKIIH 170
Query: 561 CLPRRRQSLLFSATMPKE---LVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQI 617
+RQ++LFSATMP E L +K +D G+ T K KQ + +
Sbjct: 171 QTSAKRQTMLFSATMPAEIRALSVKYMRKPMDIHVRGTGITLEKTKQIAVETTDRTKQET 230
Query: 618 LHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEF 677
L LL E+ Y I+FC T S L +L N E++ Q R+++ + F
Sbjct: 231 LRKLLDEY----QPYLGIIFCRTKRRASALNEMLLAHGYNSDELHGDLSQAKREQVMKRF 286
Query: 678 RASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLAP 737
R +K ILV +DV+ARG+D VT V IP D E YIHR+GRTGR G G V ++P
Sbjct: 287 REAKLQILVATDVAARGLDVEGVTHVFNYDIPQDVESYIHRIGRTGRAGDTGLAVTFVSP 346
>gi|421466305|ref|ZP_15914984.1| DEAD/DEAH box helicase [Acinetobacter radioresistens WC-A-157]
gi|400203085|gb|EJO34078.1| DEAD/DEAH box helicase [Acinetobacter radioresistens WC-A-157]
Length = 618
Score = 209 bits (533), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 129/379 (34%), Positives = 205/379 (54%), Gaps = 19/379 (5%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
K F E + +ALT G+ T VQE + A LEGKD +V ++TG+GK+ AFLLP +
Sbjct: 3 KTFAEFSLHESLTQALTDLGFTAPTAVQEQAIPAALEGKDLLVSSQTGSGKTAAFLLPTL 62
Query: 439 EAVLKATS----SSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGT 494
A+ + + V +L++ PTRELA Q+ +AIAL+++ G+ + ++GG
Sbjct: 63 NALADQDTFLPFKERMRAVTQPNILVISPTRELAQQVCQDAIALVRHMKGVRIAAIMGGM 122
Query: 495 RFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKD 554
F ++L+ Q++VATPGRLLD + + ++L + L++DEAD +LDLGF +D
Sbjct: 123 PFGKQIQQLKG--AQVVVATPGRLLDLVNRRQ---IKLDKVDALIVDEADRMLDLGFSED 177
Query: 555 VENIVDCLPRRRQSLLFSATMPKELVLKREHTYIDTVGLGSVETPVKIKQSCLVAPH--- 611
+E I + R+Q+L+FSAT ++ E D + + ++ET H
Sbjct: 178 LEAISELALNRKQTLMFSATFADRIIRLAECMMKDPMRI-AIETGHSTNTDITQTLHWTD 236
Query: 612 --ELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLY 669
E ++L H L++ L + +VF ST T +L L E +V ++ PQ
Sbjct: 237 GFEHKKKLLTHWLEDETLD----QAVVFASTQEDTDMLAEELAEAGHSVVALHGAMPQTV 292
Query: 670 RDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEG 729
R+R R + ILV +DV+ARG+D P ++ V+ G+P E Y+HR+GRTGR G+ G
Sbjct: 293 RNRRLRSIREGRAKILVATDVAARGLDVPTISHVINFGLPMKHEDYVHRIGRTGRAGRTG 352
Query: 730 EGVLLLAPWEEYFLDDLKD 748
+ + L E + L+D
Sbjct: 353 KAITLATYRERGKIRALED 371
>gi|325663268|ref|ZP_08151718.1| hypothetical protein HMPREF0490_02459 [Lachnospiraceae bacterium
4_1_37FAA]
gi|325470722|gb|EGC73952.1| hypothetical protein HMPREF0490_02459 [Lachnospiraceae bacterium
4_1_37FAA]
Length = 529
Score = 209 bits (533), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 134/396 (33%), Positives = 214/396 (54%), Gaps = 22/396 (5%)
Query: 380 RFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIE 439
RF+E GI P KA+ G+ + + +Q + + GKD + +A+TGTGK+ AF +P +E
Sbjct: 5 RFEELGICPEIQKAVKHMGFEEASPIQSKAIPVMMTGKDIIGQAQTGTGKTAAFGIPMLE 64
Query: 440 AVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVD 499
+ + ++LCPTRELA Q+A E L K GI VL + GG
Sbjct: 65 KIDPKNKK--------LQGIVLCPTRELAIQVAEEIRNLAKYMHGIKVLPIYGGQEIVKQ 116
Query: 500 QRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIV 559
R L+S Q+++ TPGR++DH+ K+ +++ + ++LDEAD +L++GFR+D+E I+
Sbjct: 117 IRSLKSG-TQLIIGTPGRVMDHMRRKT---IKMEQVHTVILDEADEMLNMGFREDIETIL 172
Query: 560 DCLPRRRQSLLFSATMPKEL--VLKREHTYIDTVGLGSVETPV-KIKQSCLVAPHELHFQ 616
+ +P RQ++LFSATMPK + + K+ + + + E V I+Q + +
Sbjct: 173 EGVPEERQTVLFSATMPKAIMEITKKFQKNAEVIKVTKKELTVPNIEQFYYEVKPKNKEE 232
Query: 617 ILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEE 676
+L LL + TP VI FC+T LL L ++ Q RDR+ +
Sbjct: 233 VLTRLLDIY---TPKLSVI-FCNTKKQVDLLVTALLGRGYFAAGLHGDMKQAQRDRVMQG 288
Query: 677 FRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLA 736
FR+ K ILV +DV+ARG+D +V +V +P D E Y+HR+GRTGR G+ G ++
Sbjct: 289 FRSGKTDILVATDVAARGIDVDEVEAVFNYDLPQDEEYYVHRIGRTGRAGRVGRSFSFVS 348
Query: 737 PWEEYFLDDLKDLPLDKL---QLPHLNPEIQLQMDN 769
E Y L +++ K+ ++P LN ++DN
Sbjct: 349 GKEVYKLKEIQRYCKTKIYAQKVPSLNDVANTKIDN 384
>gi|146179425|ref|XP_001020590.2| DEAD/DEAH box helicase family protein [Tetrahymena thermophila]
gi|146144568|gb|EAS00345.2| DEAD/DEAH box helicase family protein [Tetrahymena thermophila
SB210]
Length = 926
Score = 209 bits (533), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 161/521 (30%), Positives = 262/521 (50%), Gaps = 56/521 (10%)
Query: 342 HDFEEQVELIRKE-------ISKNKLNGNGEKKEKREEEPILSQKR--FDECGISPLTIK 392
HD E+ + IRKE + KL E + K + E + + F + IS TI
Sbjct: 37 HDVEKLQDRIRKETPASGEYLYDYKLEKAEEDRAKLQPEEFRKKYKINFSDLPISYNTIF 96
Query: 393 ALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQL 452
L +I+MT +Q T+ L G+D + +KTG+GK++++L+P +E + +
Sbjct: 97 GLEKRKFIKMTEIQRCTIPHILAGRDVLAASKTGSGKTLSYLVPLVERLYVQKWNP---- 152
Query: 453 VPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILV 512
+ + +I+ PTRELA+Q+ + +NHD + V ++GG K ++ ++ +L+
Sbjct: 153 LDGLGAIIILPTRELATQVFEVFNSFTQNHD-LSVGLIIGGKNVKYEKEHMKG--MNVLI 209
Query: 513 ATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQSLLFS 572
TPGRLL H++ L+MLV+DEAD +LDLGF++ + I+ LP+ RQ++LFS
Sbjct: 210 CTPGRLLQHMDETPDFDC--TNLQMLVIDEADLILDLGFKEHLNAILLNLPKSRQTILFS 267
Query: 573 ATMPK------ELVLKR-EHTY---------------IDTVGLGSVETPVKIKQSCLVAP 610
AT+ K +L LK EH + I+T E P+K+ Q +
Sbjct: 268 ATLSKSIHELSKLSLKNAEHIFLHEVRSTQDQDSQNVINTSIKDIYEAPIKLTQYYMEIN 327
Query: 611 HELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMN--VREMYSRKPQL 668
E +L L+ H KV+VF ST +Y R +K+ V E++ R+ Q
Sbjct: 328 IEDKLNMLFSFLRSH----KKNKVLVFLSTCKQVRFVYEAFRRLKLGPPVFELHGRQKQA 383
Query: 669 YRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKE 728
R I F K +L T++++ARG+D+P V +VQV P D Y+HR+GRT R +
Sbjct: 384 KRLAIFFTFAEKKFGVLFTTNLAARGLDFPGVEWIVQVDCPDDVVTYVHRVGRTARFKND 443
Query: 729 GEGVLLLAPWEEYFLDDLKDLPLDKLQLPHLNPEIQLQMDNHMAKI---DNNVKEAAYHA 785
G +L++ P E +D LK+ ++ +Q NPE QL + N + ++K A A
Sbjct: 444 GNSLLMVLPSEIKMIDKLKEKKMN-IQKLKANPEHQLSITNSLQSYLVESVDLKYLAQRA 502
Query: 786 WLGYYNSIREIGRDKTTL----VELANKFAQSIGLQRPPPL 822
++ Y SI DK ++L N ++S+GL + P +
Sbjct: 503 FISYVRSIH-FAADKEVFNVNSLDL-NGLSESLGLIQTPVI 541
>gi|358393734|gb|EHK43135.1| hypothetical protein TRIATDRAFT_163577, partial [Trichoderma
atroviride IMI 206040]
Length = 646
Score = 209 bits (533), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 166/479 (34%), Positives = 241/479 (50%), Gaps = 56/479 (11%)
Query: 398 GYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIE------AVLKATSSSTTQ 451
GY MT VQ ++ L+G D V +AKTGTGK+IAFLLP ++ L + +S
Sbjct: 100 GYDSMTPVQAKAITPALKGTDIVAQAKTGTGKTIAFLLPLLQRMIEEDPTLASRKASRNA 159
Query: 452 LVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQIL 511
I ++L PTRELA QIA EA L + G+ V + VGGT+ R+ C +L
Sbjct: 160 SSDDIRGIVLSPTRELAEQIATEAKRLC-SRTGLVVQSAVGGTQKSAMLRQTRRQGCHLL 218
Query: 512 VATPGRLLDHIEN-KSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRR--RQS 568
VATPGRL D +E+ SG+ L LVLDEAD +LD+GF +++ +I LP+ RQ+
Sbjct: 219 VATPGRLNDLLEDPNSGIDAP--NLAALVLDEADRMLDVGFERELNSIQSYLPKDKVRQT 276
Query: 569 LLFSATMP-------KELVLKREHTYIDTVGLGSVETPVKIKQSCL-VAPHELHFQILHH 620
+L SAT+P ++LV + ++ T+ T +I Q + V+ F L+
Sbjct: 277 MLVSATIPDNVIQLARKLVRPDDFEFVQTIPEHETLTHDRIPQHVVTVSSWANVFPSLYE 336
Query: 621 LLKEHILGT------PDYKVIVFCSTGMVTSLLYLLLR---------EMKMNVREMYSRK 665
L+ + P +K IV+ +T TS++ L ++++ + S+
Sbjct: 337 LIDREVAAAKADHTIPPFKAIVYLNT---TSMVELAGEIGFQRRKSGQLRIPTFAIQSQL 393
Query: 666 PQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGRE 725
Q R + ++ FR SK IL +SDV+ARGMD+P+VT V+QV P +RE YIHRLGRTGR+
Sbjct: 394 SQFQRTKAADMFRNSKSGILFSSDVTARGMDFPNVTHVIQVDAPRERESYIHRLGRTGRQ 453
Query: 726 GKEGEGVLLLAPWEEYFLDD-LKDLPLD-KLQLPHLN---------PEIQLQMDNHMAKI 774
K GEG L + P L+ LPL L H P ++ + + I
Sbjct: 454 NKSGEGWLFVPPMSASTARKLLRGLPLKPNKSLEHAEVDINAVEELPAYHEEVKSLIQAI 513
Query: 775 DNNVKEAAYHAWLGYYNSIREIGRDKTTLVELANKFA-QSIGLQRPPPLFRKTALKMGL 832
+ +AY + G S RE LVE N +A + G PP + A GL
Sbjct: 514 PRKIMASAYTSLFGGQLSDRE------DLVEDLNDWAIKGWGWSEPPAVSSSWARNQGL 566
>gi|449507686|ref|XP_002193612.2| PREDICTED: ATP-dependent RNA helicase DDX18 [Taeniopygia guttata]
Length = 679
Score = 209 bits (533), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 144/422 (34%), Positives = 233/422 (55%), Gaps = 30/422 (7%)
Query: 386 ISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKAT 445
+S T+K + G+ MT +Q ++ LEG+D + AKTG+GK++AFL+PA+E + K
Sbjct: 195 VSENTLKGINDMGFTHMTEIQHKSIKPLLEGRDILAAAKTGSGKTLAFLIPAVELIYK-- 252
Query: 446 SSSTTQLVP--PIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRL 503
+ +P V+IL PTRELA Q + L NH ++GG+ + ++L
Sbjct: 253 ----LKFMPRNGTGVIILSPTRELAMQTYG-VLKELMNHHVHTYGLIMGGSNRSAEAQKL 307
Query: 504 ESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLP 563
+ I+VATPGRLLDH++N G + L+ LV+DEAD +L++GF ++++ I+ LP
Sbjct: 308 -GNGINIIVATPGRLLDHMQNTPGFMYK--NLQCLVIDEADRILEVGFEEEMKQIIKLLP 364
Query: 564 RRRQSLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQI 617
+RRQ++LFSAT ++ + LK+E Y+ T ++Q +V P E F +
Sbjct: 365 KRRQTMLFSATQTRKVEDLAKISLKKEPLYVGVDDNKETATVDGLEQGYVVCPSEKRFLL 424
Query: 618 LHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEF 677
L LK++ K++VF S+ M Y LL + + V ++ ++ Q R +F
Sbjct: 425 LFTFLKKN----RKKKLMVFFSSCMSVKYHYELLNYIDLPVLAIHGKQKQTKRTTTFFQF 480
Query: 678 RASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEG--VLLL 735
++ IL+ +DV+ARG+D P+V +VQ P D ++YIHR+GRT R G G G +L+L
Sbjct: 481 CNAESGILLCTDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTAR-GINGRGHALLIL 539
Query: 736 APWEEYFLDDLKD--LPLDKLQLPHLN-PEIQLQMDNHMAK--IDNNVKEAAYHAWLGYY 790
P E FL LK +PL + + +IQ Q++ + K + + AY A++ Y
Sbjct: 540 RPEELGFLRYLKQARVPLSEFEFSWSKISDIQSQLEKLIEKNYFLHKSAQEAYKAYIRAY 599
Query: 791 NS 792
+S
Sbjct: 600 DS 601
Score = 61.2 bits (147), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 49/83 (59%), Gaps = 8/83 (9%)
Query: 402 MTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLVP--PIYVL 459
MT +Q ++ LEG+D + AKTG+GK++AFL+PA+E + K + +P V+
Sbjct: 1 MTEIQHKSIKPLLEGRDILAAAKTGSGKTLAFLIPAVELIYK------LKFMPRNGTGVI 54
Query: 460 ILCPTRELASQIAAEAIALLKNH 482
IL PTRELA Q L+ +H
Sbjct: 55 ILSPTRELAMQTYGVLKELMNHH 77
>gi|190195544|gb|ACE73640.1| ATP-dependent RNA helicase DDX18 (predicted) [Sorex araneus]
Length = 553
Score = 209 bits (533), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 154/451 (34%), Positives = 245/451 (54%), Gaps = 41/451 (9%)
Query: 390 TIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSST 449
T+KA+ G+ MT +Q ++ LEG+D + AKTG+GK++AFL+PA+E ++K
Sbjct: 73 TLKAIKEMGFTNMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPAVELIVKL----- 127
Query: 450 TQLVP--PIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDP 507
+ +P VLIL PTRELA Q L+ H L ++GG+ + ++L +
Sbjct: 128 -KFMPRNGTGVLILSPTRELAMQTFGVLKELMTYHVHTYGL-IMGGSNRSAEAQKL-GNG 184
Query: 508 CQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQ 567
I+VATPGRLLDH++N G + L+ LV+DEAD +LD+GF ++++ I+ LP RRQ
Sbjct: 185 INIIVATPGRLLDHMQNTPGFMYK--NLQCLVIDEADRILDVGFEEELKQIIKLLPTRRQ 242
Query: 568 SLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILHHL 621
++LFSAT ++ + LK+E Y+ + T ++Q +V P E F +L
Sbjct: 243 TMLFSATQTRKVEDLARISLKKEPLYVGVDDDKTNATVDGLEQGYVVCPSEKRFLLLFTF 302
Query: 622 LKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEFRASK 681
LK++ K++VF S+ M Y LL + + V ++ ++ Q R +F +
Sbjct: 303 LKKN----RKKKLMVFFSSCMSVKYHYELLNYIDLPVLAIHGKQKQNKRTTTFFQFCNAD 358
Query: 682 RLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEG--VLLLAPWE 739
IL+ +DV+ARG+D P+V +VQ P D ++YIHR+GRT R G G G +L+L P E
Sbjct: 359 SGILLCTDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTAR-GLNGRGHALLILRPEE 417
Query: 740 EYFLDDLKD--LPLDKLQLPHLN-PEIQLQMDNHMAKIDNNVKEAAYHAWLGYYNSIREI 796
FL LK +PL + + +IQ Q++ + K + + ++A A+ Y IR
Sbjct: 418 LGFLRYLKQSKVPLSEFEFSWSKISDIQSQLEKLIEK-NYFLHKSAQEAYKSY---IR-- 471
Query: 797 GRDKTTLVELAN-------KFAQSIGLQRPP 820
D +L ++ N + A S G + PP
Sbjct: 472 AYDSHSLKQIFNVNSLNLPQVALSFGFKVPP 502
>gi|56460521|ref|YP_155802.1| ATP-dependent RNA helicase DbpA [Idiomarina loihiensis L2TR]
gi|56179531|gb|AAV82253.1| ATP-dependent RNA helicase [Idiomarina loihiensis L2TR]
Length = 474
Score = 209 bits (533), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 136/379 (35%), Positives = 207/379 (54%), Gaps = 18/379 (4%)
Query: 380 RFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIE 439
F++ + P + L GY QMT VQ +L L DAVV+A TG+GK+ AF L +
Sbjct: 22 HFNQLNLPPALLTRLDEIGYQQMTPVQSLSLPVILNNTDAVVRADTGSGKTTAFALTLL- 80
Query: 440 AVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVD 499
A L+A S S LV LCPTRELA Q+A E L K+ I +LTL GG ++
Sbjct: 81 AKLEAKSFSPQALV-------LCPTRELAHQVADEVRKLAKSMLNIKILTLCGGEPSRIQ 133
Query: 500 QRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIV 559
LE +LV TPGR+LDH+E ++ V L L LVLDEAD +L++GF+ + IV
Sbjct: 134 TNSLEHG-AHVLVGTPGRVLDHLEQRN---VDLSMLTTLVLDEADRMLEMGFQDSLNAIV 189
Query: 560 DCLPRRRQSLLFSATMPKELVLKREHTYIDTVGLGSVETPVK--IKQSCLVAPHELHFQI 617
+P+ RQ+LLFSAT PK + E + +++ K I+Q +E Q+
Sbjct: 190 KHIPKTRQTLLFSATYPKNIAALAEQVTTKARNIEAIQEQAKPQIEQLFYAMNNEDSAQL 249
Query: 618 LHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEF 677
+ +LL +H P+ +VFC+T ++ LR K +V ++ Q RD+ +F
Sbjct: 250 VMNLLGDH---QPE-NCLVFCNTKNEVKDIFNTLRANKFSVLALHGELEQKDRDQAIIQF 305
Query: 678 RASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLAP 737
+L+ +DV++RG+D ++ V+ V + D + + HR+GRTGR GKEG + L+A
Sbjct: 306 SNGSARVLIATDVASRGLDIAELDLVISVNMAHDLDTHTHRIGRTGRAGKEGVAITLIAE 365
Query: 738 WEEYFLDDLKDLPLDKLQL 756
++Y + L+D + +Q+
Sbjct: 366 KDDYKMRLLEDTFAEPIQV 384
>gi|355751634|gb|EHH55889.1| hypothetical protein EGM_05182 [Macaca fascicularis]
Length = 670
Score = 209 bits (533), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 153/451 (33%), Positives = 245/451 (54%), Gaps = 41/451 (9%)
Query: 390 TIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSST 449
T+KA+ G+ MT +Q ++ LEG+D + AKTG+GK++AFL+PA+E ++K
Sbjct: 190 TLKAIKEMGFTNMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPAVELIVK------ 243
Query: 450 TQLVP--PIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDP 507
+ +P VLIL PTRELA Q L+ +H L ++GG+ + ++L ++
Sbjct: 244 LKFMPRNGTGVLILSPTRELAMQTFGVLKELMTHHVHTYGL-IMGGSNRSAEAQKL-ANG 301
Query: 508 CQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQ 567
I+VATPGRLLDH++N G + L+ LV+DEAD +LD+GF ++++ I+ LP RRQ
Sbjct: 302 INIIVATPGRLLDHMQNTPGFMYK--NLQCLVIDEADRILDVGFEEELKQIIKLLPTRRQ 359
Query: 568 SLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILHHL 621
++LFSAT ++ + LK+E Y+ + T ++Q +V P E F +L
Sbjct: 360 TMLFSATQTRKVEDLARISLKKEPLYVGVDDDKANATVDGLEQGYVVCPSEKRFLLLFTF 419
Query: 622 LKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEFRASK 681
LK++ K++VF S+ M Y LL + + V ++ ++ Q R +F +
Sbjct: 420 LKKN----RKKKLMVFFSSCMSVKYHYELLNYIDLPVLAIHGKQKQNKRTTTFFQFCNAD 475
Query: 682 RLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEG--VLLLAPWE 739
L+ +DV+ARG+D P+V +VQ P D ++YIHR+GRT R G G G +L+L P E
Sbjct: 476 SGTLLCTDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTAR-GLNGRGHALLILHPEE 534
Query: 740 EYFLDDLKD--LPLDKLQLPHLN-PEIQLQMDNHMAKIDNNVKEAAYHAWLGYYNSIREI 796
FL LK +PL + +IQ Q++ + K + + ++A A+ Y IR
Sbjct: 535 LGFLHYLKQSKVPLSEFDFSWSKISDIQSQLEKLIEK-NYFLHKSAQEAYKSY---IR-- 588
Query: 797 GRDKTTLVELAN-------KFAQSIGLQRPP 820
D +L ++ N + A S G + PP
Sbjct: 589 AYDSHSLKQIFNVNNLNLPQVALSFGFKVPP 619
>gi|319950441|ref|ZP_08024356.1| ATP-dependent DEAD-box RNA helicase DeaD [Dietzia cinnamea P4]
gi|319435905|gb|EFV91110.1| ATP-dependent DEAD-box RNA helicase DeaD [Dietzia cinnamea P4]
Length = 679
Score = 209 bits (533), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 142/410 (34%), Positives = 210/410 (51%), Gaps = 32/410 (7%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F + G++P KA+ GY + +Q AT+ LEG+D V A+TGTGK+ AF LP +
Sbjct: 51 FADMGLAPAVAKAVRDVGYEVPSAIQAATIPLVLEGRDVVGLAQTGTGKTAAFALPILSL 110
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+ + S LIL PTRELA Q+A + + VL + GG + +
Sbjct: 111 IDPSVKSP--------QALILAPTRELALQVAEACVTYSAGMPQVNVLPIYGGQAYGIQL 162
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
L QI+V TPGR++DH+ K G ++ L GL+ LVLDEAD +L +GF++DVE I+
Sbjct: 163 SGLRRG-AQIIVGTPGRVIDHL--KKG-TLDLSGLRHLVLDEADEMLAMGFQEDVERILS 218
Query: 561 CLPRRRQSLLFSATMPKELVLKREHTYIDTVGLGSVETPVKIKQSCLVAPH-ELHFQILH 619
P Q LFSATMP + + D T VK+ AP + + +++
Sbjct: 219 DTPESTQVALFSATMPSAIRRISQKYLTDP-------TEVKVASKTSTAPTIQQRYVLVN 271
Query: 620 HLLK----EHILGTPDY-KVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRIS 674
H K IL D+ +I+F T T L LR + + PQ R+R
Sbjct: 272 HRDKLDALTRILEVEDFDAMIMFVRTKSATEELAERLRARGFSAAPINGDIPQNLRERTI 331
Query: 675 EEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLL 734
E + + ILV +DV+ARG+D P ++ VV IP D E YIHR+GRTGR G+ G +L
Sbjct: 332 EALKDGRTDILVATDVAARGLDVPRISHVVNYDIPHDTESYIHRIGRTGRAGRSGHALLF 391
Query: 735 LAPWEEYFLDDLKDL---PLDKLQLPHLNPEIQLQMDNHMAKIDNNVKEA 781
+ P E L ++ PL ++QLP ++ +++ MAK ++ E+
Sbjct: 392 VTPRERRLLSQIERATRQPLTEVQLPSVDDVNEMR----MAKFAQSITES 437
>gi|396463052|ref|XP_003836137.1| hypothetical protein LEMA_P054780.1 [Leptosphaeria maculans JN3]
gi|312212689|emb|CBX92772.1| hypothetical protein LEMA_P054780.1 [Leptosphaeria maculans JN3]
Length = 848
Score = 209 bits (533), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 151/460 (32%), Positives = 236/460 (51%), Gaps = 35/460 (7%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
K F + +S T + L ++ + MT VQ + L G+D + AKTG+GK+++FL+P +
Sbjct: 93 KDFTDLPLSEPTKQGLKSSHFAVMTDVQAKAIPLALLGRDILAAAKTGSGKTLSFLIPVL 152
Query: 439 EAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
E + + + LIL PTRELA QI + ++ L+GG +
Sbjct: 153 ENLYRLQHVGQD---AGLGALILSPTRELAIQIFDVLRKIGRHGHMFSASLLIGGKSLEA 209
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
++ L ILVATPGRLL H+ + S LKMLVLDEAD +LD+GF++DV+ I
Sbjct: 210 ERNALPK--TNILVATPGRLLQHLSQTAMFSAD--DLKMLVLDEADRILDMGFQRDVDAI 265
Query: 559 VDCLPRRRQSLLFSATMPKEL-----VLKREHTYIDTVGLGSVETPVKIKQSCLVAPHEL 613
+D LP+ RQ+LLFSAT K++ + ++ Y+ TP + Q+ ++ P E
Sbjct: 266 IDYLPKERQTLLFSATQSKKVSDLARLSLQDPEYVSVHAEDKSATPKGLTQNYIICPLEE 325
Query: 614 HFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK--MNVREMYSRKPQLYRD 671
L ++ + K++ F ST +Y R M+ + + ++ R+ Q R
Sbjct: 326 KMDTLWSFIQ----ASKKSKILCFFSTAKTVRFVYESFRHMQPGIPLLHIHGRQKQGARL 381
Query: 672 RISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEG 731
+ +F A+K L +DV+ARG+D+P V V+QV P D + YIHR+GRT R +EG G
Sbjct: 382 ETTAKFSAAKYSCLFATDVAARGLDFPAVDFVIQVDCPDDVDTYIHRVGRTARYNREGRG 441
Query: 732 VLLLAPWEEYFLDDLKDLPLDKLQLPHLN------PEIQLQMDNHMAKIDNNVKEAAYHA 785
V+ LAP EE + LK L K+ + +N I+ Q+ N M D +K A
Sbjct: 442 VVFLAPSEEEGM--LKRLEAKKVPVEMINVRQKKRTTIKDQLQN-MCFQDPALKYLGQKA 498
Query: 786 WLGYYNSI-----REIGRDKTTLVELANKFAQSIGLQRPP 820
++ + SI +E+ + K +E +A S+GL P
Sbjct: 499 FMTHVKSIYLQKDKEVFKLKEYDLE---AYAASLGLPGTP 535
>gi|451856883|gb|EMD70174.1| MAPK protein MPS1 [Cochliobolus sativus ND90Pr]
Length = 1051
Score = 209 bits (533), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 156/466 (33%), Positives = 242/466 (51%), Gaps = 39/466 (8%)
Query: 374 PILSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAF 433
P + RF+E +S T+ A+ G+ +MT +Q+ T+ L G+D + AKTG+GK++AF
Sbjct: 567 PTPNPVRFEELNLSERTMSAIKEMGFEKMTEIQQKTIPPLLSGRDVLGAAKTGSGKTLAF 626
Query: 434 LLPAIEAV--LKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHD-GIGVLTL 490
L+PAIE + L+ + T V+++ PTRELA QI A L+ NH G+ L
Sbjct: 627 LIPAIEMLSQLRFKPRNGTG------VIVVSPTRELALQIFGVARELMSNHSQTFGI--L 678
Query: 491 VGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLG 550
+GG + +L +++ATPGRLLDH+ N G + L+ L++DEAD +L++G
Sbjct: 679 IGGANRSAEAEKLRKG-LNLIIATPGRLLDHLHNTQGFVFK--NLRSLIIDEADRILEVG 735
Query: 551 FRKDVENIVDCLPRRRQSLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQ 604
F ++ +I+ LP RQ++LFSAT + + LK YI+ T ++Q
Sbjct: 736 FEDEMRSIIKILPTERQTMLFSATQTTKVEDLARISLKPGPLYINVDYRAEHSTVQGLEQ 795
Query: 605 SCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSR 664
++ + F++L LK+H KVIVF S+ LL + + V ++ +
Sbjct: 796 GYVLCDSDTRFRLLFSFLKKH----QKKKVIVFLSSCASVDFYSELLNYIDLPVLGLHGK 851
Query: 665 KPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGR 724
Q R EF ++ L+ +DV+ARG+D P+V V+Q P D YIHR+GRT R
Sbjct: 852 LKQQARTNRFFEFVNAQSGTLICTDVAARGLDIPEVDWVIQFDPPDDPRDYIHRVGRTAR 911
Query: 725 EGKEGEG--VLLLAPWEEYFLDDLKD--LPLDKLQLPH---LNPEIQLQMDNHMAKIDNN 777
G G+G ++ L P E FL LK+ +PL + +LP LN + QL+ N
Sbjct: 912 -GANGKGRSLMFLLPSEVGFLKLLKENRVPLVEFELPSNKILNIQSQLEALISKNYYLNK 970
Query: 778 VKEAAYHAWLGYY--NSIREI-GRDKTTLVELANKFAQSIGLQRPP 820
+ Y ++L Y +S+R + K LV K A+S G PP
Sbjct: 971 SAKDGYRSYLQSYASHSLRSVFDVHKLDLV----KVAKSFGFSTPP 1012
>gi|291522717|emb|CBK81010.1| Superfamily II DNA and RNA helicases [Coprococcus catus GD/7]
Length = 526
Score = 209 bits (533), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 140/417 (33%), Positives = 216/417 (51%), Gaps = 32/417 (7%)
Query: 373 EPILSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIA 432
EP+ RF++ G+ ++A+T G+ + T +Q + + G+D + +A+TGTGK+ +
Sbjct: 2 EPV----RFEDLGVDERILRAVTEMGFEEATPIQAKAIPEVMTGQDIIGQAQTGTGKTAS 57
Query: 433 FLLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVG 492
F +P ++ V + ++LCPTRELA Q A E L K GI VL + G
Sbjct: 58 FGIPMLQKVDPKNKH--------VQAIVLCPTRELAIQSADEIRKLAKFMHGIKVLPIYG 109
Query: 493 GTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFR 552
G V Q R Q+L+ TPGR++DH+ + ++L LK++VLDEAD +L++GFR
Sbjct: 110 GQDI-VKQIRSLKTGVQVLIGTPGRVMDHMRRHT---IKLDDLKIVVLDEADEMLNMGFR 165
Query: 553 KDVENIVDCLPRRRQSLLFSATMPKELVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHE 612
+D+E I+ P RQ+LLFSATMP+ +++ TY + V +K+ VA E
Sbjct: 166 EDIETILSQTPEERQTLLFSATMPQP-IMEIARTYQKNAKIVKV-----VKRELTVANIE 219
Query: 613 LHFQILHHLLKEHILG------TPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKP 666
++ + KE +L P V VFC+T L L+ ++
Sbjct: 220 QYYYEVRPKNKEEVLSRLLDIYNPALSV-VFCNTKRQVDELVEGLKGRGYFAEGLHGDMK 278
Query: 667 QLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREG 726
Q RDR+ FR + ILV +DV+ARG+D DV +V +P D E Y+HR+GRTGR G
Sbjct: 279 QQQRDRVMNGFRNGRTEILVATDVAARGIDVDDVDAVFNYDLPQDDEYYVHRIGRTGRAG 338
Query: 727 KEGEGVLLLAPWEEYFLDDLKDLPLDKL---QLPHLNPEIQLQMDNHMAKIDNNVKE 780
K G+ + E Y L D++ K+ Q+P LN ++ D K+ + E
Sbjct: 339 KNGKAFTFITGREFYKLKDIQRYCRTKIIAKQVPSLNDVANVKADKIFEKVAGMIDE 395
>gi|163839675|ref|YP_001624080.1| ATP-dependent RNA helicase [Renibacterium salmoninarum ATCC 33209]
gi|162953151|gb|ABY22666.1| ATP-dependent RNA helicase [Renibacterium salmoninarum ATCC 33209]
Length = 652
Score = 209 bits (533), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 143/414 (34%), Positives = 215/414 (51%), Gaps = 30/414 (7%)
Query: 355 ISKNKLNGNGE----KKEKREEEPILSQKRFDECGISPLTIKALTAAGYIQMTRVQEATL 410
+S+N N + E + EE+ +L F + G+ + AL GY + + +Q AT+
Sbjct: 20 MSENTQNSSAEIENSAPAETEEQDVL----FTDFGLDGRVLAALKDVGYEKPSPIQAATI 75
Query: 411 SACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQ 470
LEG+D V A+TGTGK+ AF LPA+ + ++ TQ +L+L PTRELA Q
Sbjct: 76 PVLLEGRDVVGLAQTGTGKTAAFALPALSRMANLPATKDTQ------ILVLAPTRELALQ 129
Query: 471 IAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSV 530
+A + + D VL + GG+ + L Q++V TPGR++DH+ S S+
Sbjct: 130 VAEAFSSYAAHMDNFSVLPVYGGSAYGPQLAGLRRG-AQVVVGTPGRVIDHL---SKGSL 185
Query: 531 RLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQSLLFSATMPKELVLKREHTYIDT 590
L L+ LVLDEAD +L +GF DVE I+ P +Q LFSATMP + + + Y++
Sbjct: 186 DLSNLQYLVLDEADEMLRMGFADDVEQILAETPEDKQVALFSATMPGQ-IRRIAKKYLNN 244
Query: 591 VGLGSVETPVKIKQSCLVAPHELHFQIL--HHL-LKEHILGTPDYK-VIVFCSTGMVTSL 646
E VK K + + + Q++ H L IL DY VI F T M T
Sbjct: 245 ----PAEISVKAKTTTGENTRQRYLQVMGPHKLDAMTRILEVEDYDGVIAFVRTKMATEE 300
Query: 647 LYLLLREMKMNVREMYSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQV 706
L L+ + PQ R+R E R+ +LV +DV+ARG+D ++ VV
Sbjct: 301 LADKLKSRGYRAAAINGDIPQQQRERTVEALRSGSIDVLVATDVAARGLDVERISLVVNY 360
Query: 707 GIPPDREQYIHRLGRTGREGKEGEGVLLLAPWEEYFLDDLKDL---PLDKLQLP 757
IP D E Y+HR+GRTGR G+ G+ +L + P E+Y L ++ P++++ LP
Sbjct: 361 DIPHDTESYVHRIGRTGRAGRSGDAILFMTPREKYLLRAIEKATRQPVEQMHLP 414
>gi|332653730|ref|ZP_08419474.1| ATP-dependent RNA helicase DeaD [Ruminococcaceae bacterium D16]
gi|332516816|gb|EGJ46421.1| ATP-dependent RNA helicase DeaD [Ruminococcaceae bacterium D16]
Length = 391
Score = 209 bits (533), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 142/400 (35%), Positives = 218/400 (54%), Gaps = 24/400 (6%)
Query: 373 EPILSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIA 432
E + Q R+ + G+SP ++A+ GY+Q T VQ ++ +E KD + KA TGTGK+ A
Sbjct: 6 EIVNDQVRYADLGLSPELMRAIDKKGYVQATPVQGGSIPYFMEYKDVIAKAPTGTGKTFA 65
Query: 433 FLLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVG 492
F +P +E + + + L+L PTRELA QI E L +G+ + L G
Sbjct: 66 FGIPMVEHIDPESRD--------VQGLVLAPTRELAIQIRDELRDLCAFKEGVRTVCLYG 117
Query: 493 GTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFR 552
G +L+ DP QI+VATPGRL+DH++ ++ VRL ++ +VLDEAD +LD+GF
Sbjct: 118 GQPIDKQITQLKKDP-QIVVATPGRLMDHVKRRT---VRLDKVQTVVLDEADRMLDMGFI 173
Query: 553 KDVENIVDCLPRRRQSLLFSATMPKEL-----VLKREHTYIDTVGLGSVETPVKIKQSCL 607
KDV I+D +P+RR LFSAT+ +E+ V +R+ I TV P I Q L
Sbjct: 174 KDVTRILDLMPKRRNLGLFSATISREVMDISWVYQRDPVEI-TVRADEENKP-DITQYRL 231
Query: 608 VAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQ 667
+ L++ +G D +VI FC+T +T L LLR + ++ Q
Sbjct: 232 DVERNEKVDTMVRLME---MGGYD-RVIAFCNTKNMTDRLAGLLRMRHITCEAIHGDIQQ 287
Query: 668 LYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGK 727
R++ ++FR + +L +DV+ARG+D DV +V +P + E YIHR+GRTGR +
Sbjct: 288 RVREKTLQKFREGQLRVLAATDVAARGLDIDDVDAVFNYDVPDENEYYIHRIGRTGRAKR 347
Query: 728 EGEGVLLLAPWEEYF-LDDLKDLPLDKLQLPHLNPEIQLQ 766
G L++ E LDD++ + +Q HLN + +L+
Sbjct: 348 HGVAFSLVSNITEGIRLDDIQKNTGNNIQYVHLNAQGELE 387
>gi|255947238|ref|XP_002564386.1| Pc22g03430 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211591403|emb|CAP97631.1| Pc22g03430 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 602
Score = 209 bits (533), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 157/464 (33%), Positives = 243/464 (52%), Gaps = 44/464 (9%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
++F E +S T++ + G+ MT +Q+ T+ L G+D + AKTG+GK++AFLLPAI
Sbjct: 119 QKFTELNLSEKTMQGINDMGFTTMTEIQQRTVPPLLAGRDVLGAAKTGSGKTLAFLLPAI 178
Query: 439 EAV--LKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHD---GIGVLTLVGG 493
E + L+ + T VL++ PTRELA QI A L+ +H GI ++GG
Sbjct: 179 EMLHALRFKPRNGTG------VLVVSPTRELALQIFGVARELMAHHSQTYGI----VIGG 228
Query: 494 TRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRK 553
+ + +L +LVATPGRLLDH++N G + LK LV+DEAD +L++GF
Sbjct: 229 ANRRAEAEKLMKG-VNLLVATPGRLLDHLQNTQGFVFK--NLKTLVIDEADRILEVGFED 285
Query: 554 DVENIVDCLP-RRRQSLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSC 606
++ IV LP RQ++LFSAT + + L+ YI+ T ++Q
Sbjct: 286 EIRQIVKILPSEERQTMLFSATQTTKVEDLARISLRPGPLYINVDHSKEHSTVAGLEQGY 345
Query: 607 LVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKP 666
+V + F +L LK ++ K+IVF S+ LL + + V E++ ++
Sbjct: 346 VVCEADKRFLLLFSFLKRNL----KKKIIVFFSSCSCVKYHAELLNYIDLPVLELHGKQK 401
Query: 667 QLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREG 726
Q R EF +K+ L+ +DV+ARG+D P V ++Q P D YIHR+GRT R G
Sbjct: 402 QQKRTNTFFEFCNAKQGTLICTDVAARGLDIPAVDWIIQFDPPDDPRDYIHRVGRTAR-G 460
Query: 727 KEGEG--VLLLAPWEEYFLDDLKD--LPLDKLQLPH---LNPEIQLQMDNHMAKIDNNVK 779
KEG+G ++ L P E FL LKD +P+ + + P +N + QL+ N
Sbjct: 461 KEGKGRSLMFLQPSEVGFLKHLKDARVPVVEFEFPASKIVNVQSQLEKLIGQNYYLNKSA 520
Query: 780 EAAYHAWLGYY--NSIREI-GRDKTTLVELANKFAQSIGLQRPP 820
+ Y ++L Y +S+R + +K LV++A F G PP
Sbjct: 521 KDGYRSYLQAYASHSLRTVFDVNKLDLVKIAKGF----GFNAPP 560
>gi|449484603|ref|XP_002197738.2| PREDICTED: probable ATP-dependent RNA helicase DDX10 [Taeniopygia
guttata]
Length = 824
Score = 209 bits (533), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 146/460 (31%), Positives = 247/460 (53%), Gaps = 37/460 (8%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
+RF + +S T+K L + Y +T +Q T+ L+GKD + AKTG+GK++AF++PA+
Sbjct: 18 QRFSDFPLSKKTLKGLQESQYRVVTEIQRQTIGLALQGKDVLGAAKTGSGKTLAFIVPAL 77
Query: 439 EAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
E + + +S L VLI+ PTRELA Q + KNH+ L ++GG K
Sbjct: 78 ELLYRQQWTSADGL----GVLIISPTRELAYQTFKVLRKVGKNHEFSAGL-IIGGKDLKE 132
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
+ R+ +L+ TPGRLL H++ S L+ML+LDEAD +LD+GF + I
Sbjct: 133 ESERIHH--INMLICTPGRLLQHMDETSYFYAS--DLQMLILDEADRILDMGFADTMNAI 188
Query: 559 VDCLPRRRQSLLFSATMPKEL-----VLKREHTYIDTVGLGSVETPVKIKQSCLVAPHEL 613
++ LP++RQ+LLFSAT K + + ++ Y+ TP + Q+ +V +
Sbjct: 189 IENLPKKRQTLLFSATQTKSVKDLARLSLKDPEYVWVHEKAKFSTPATLDQNYVVCELQQ 248
Query: 614 HFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK--MNVREMYSRKPQLYRD 671
+L+ L+ H+ K IVF S+ L+ + +++ + V ++ ++ Q+ R
Sbjct: 249 KVNMLYSFLRTHL----KKKTIVFFSSCKEVQYLFRVFCKLQPGLPVLALHGKQQQMKRM 304
Query: 672 RISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEG 731
+ F K +L +D++ARG+D+P V V+Q P D YIHR+GRT R + GE
Sbjct: 305 EVYTCFVRKKAAVLFATDIAARGLDFPAVNWVIQFDCPEDANTYIHRVGRTARYKEGGEA 364
Query: 732 VLLLAPWEEY-FLDDL--KDLPLDKLQLPHLNPE----IQLQMDNHMAKIDNNVKEAAYH 784
+L+L P EE ++ L + +P+ +++ +NPE IQ ++ +A+ D +KE A
Sbjct: 365 LLVLLPSEEKGMVEQLAQRKVPISEIK---INPEKLTDIQKRLQAFLAQ-DQELKEKAQR 420
Query: 785 AWLGYYNSIREIGRDKTTL----VELANKFAQSIGLQRPP 820
++ Y S+ + ++K + LA ++A S+GL P
Sbjct: 421 CFVSYLRSVY-LMKNKEVFDVFKLPLA-EYALSLGLAMAP 458
>gi|408388832|gb|EKJ68510.1| hypothetical protein FPSE_11286 [Fusarium pseudograminearum CS3096]
Length = 676
Score = 209 bits (533), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 170/506 (33%), Positives = 243/506 (48%), Gaps = 86/506 (16%)
Query: 398 GYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAV------LKATSSSTTQ 451
GY MT VQ T+ L+G D V +AKTGTGK++AFLLP ++ + L ++
Sbjct: 96 GYETMTPVQAKTIKPALKGTDIVAQAKTGTGKTMAFLLPLLQRMIAEDPSLAGKNARRQA 155
Query: 452 LVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGT--RFKVDQRRLESDPCQ 509
I ++L PTRELA QIA EA L +N G+ V VGGT R ++Q R + C
Sbjct: 156 RSDDIRGIVLSPTRELAEQIAMEARRLCRN-TGLVVQCAVGGTDKRGMLNQTRRQG--CH 212
Query: 510 ILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRR---- 565
+LVATPGRL D + + G + L LVLDEAD +LD GF +++ IV LPR
Sbjct: 213 LLVATPGRLNDVLADP-GSGIDAPNLAALVLDEADRMLDTGFERELNEIVSQLPRPEEKV 271
Query: 566 RQSLLFSATMP-------KELVLKREHTYIDTVGLGSVETPVKIKQSCL-VAPHELHFQI 617
RQ++L SAT+P + +V + ++ T+ T K+ Q + V+ F
Sbjct: 272 RQTMLVSATIPDSVIRLARSMVRADDFEFVQTIPENESLTHDKVPQHIVPVSSWTQVFPT 331
Query: 618 LHHLL-KEHILGTPD-----YKVIVFCSTGMVTSLLYLLLREMKMNVRE----------M 661
L L+ +EH D +K IV+ +T + L L +M+ N R +
Sbjct: 332 LFELMDREHKKSVEDPNELPFKAIVYLNTTALVELGGELGYQMRQNARNDGKSYLPTYVL 391
Query: 662 YSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGR 721
S+ Q R R ++ FR +K IL +SDV+ARGMD+P+VT V+Q+ P DRE YIHRLGR
Sbjct: 392 QSKMGQNQRQRAADRFREAKSGILFSSDVTARGMDFPNVTHVIQIDTPRDRESYIHRLGR 451
Query: 722 TGREGKEGEGVLLLAPWEEYFLDDLKDLPLDKLQLPHLNPEIQLQMDNHMAKIDNNVKEA 781
TGR+ KEG+G L+ LPH + + +M + N+ E+
Sbjct: 452 TGRQNKEGQGWLI---------------------LPHSSVRVARKMLQGLPIAQNSSLES 490
Query: 782 A-----------YH-------------AWLGYYNSIREIGRDKTTLVELANKFAQ-SIGL 816
A YH Y S+ + DK E NK+ + G
Sbjct: 491 AETNVEGGETTPYHDSTKALFSVVPRDLLAQTYTSMFGLATDKVETAEDVNKWTKHGWGW 550
Query: 817 QRPPPLFRKTALKMGLKDIPGIRLRK 842
PP + KMGL G+ +R+
Sbjct: 551 DTPPFVSSMWVNKMGLARASGMNVRE 576
>gi|347540439|ref|YP_004847864.1| ATP-dependent RNA helicase [Pseudogulbenkiania sp. NH8B]
gi|345643617|dbj|BAK77450.1| ATP-dependent RNA helicase [Pseudogulbenkiania sp. NH8B]
Length = 438
Score = 209 bits (533), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 136/360 (37%), Positives = 200/360 (55%), Gaps = 21/360 (5%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F + G++P AL AAGY T VQ A++ A L G D +V A+TG+GK+ AFLLP+++
Sbjct: 3 FADLGLAPAITSALDAAGYTTPTPVQAASIPAALAGHDLLVSAQTGSGKTAAFLLPSLQ- 61
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
K T ST P +L+L PTRELA Q+ A + + LVGG F Q
Sbjct: 62 --KLTERSTGSGQGP-RILVLTPTRELAQQVEKNATEYGSQLRWLRTVCLVGGASFGY-Q 117
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
R + P I+VATPGRL+DH+ +SG + L+ML+LDEAD +LD+GF +D+E IV
Sbjct: 118 IRAMARPVDIMVATPGRLMDHM--RSG-RIDFSRLEMLILDEADRMLDMGFIEDIETIVK 174
Query: 561 CLPRRRQSLLFSATMPKEL-----VLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHF 615
P RQ++LFSAT+ + L R+ I+ + ET I++ L A H
Sbjct: 175 ATPDSRQTVLFSATLDGTVGKLAQKLTRDPQRIE---IAREETGGNIEEHLLYADDNRHK 231
Query: 616 Q-ILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRIS 674
+ +L H+LKE + ++F +T + + L L + ++ PQ +R+R
Sbjct: 232 ERLLDHILKEAGFD----QAVIFTATKIGSEELADKLSDQGYAAACLHGDMPQNWRNRTL 287
Query: 675 EEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLL 734
+ R + ILV +DV+ARG+D P +T VV +P E Y+HR+GRTGR G++G + L
Sbjct: 288 NDLRRGRVRILVATDVAARGIDVPTITHVVNYDLPKQAEDYVHRIGRTGRAGRDGVAITL 347
>gi|313672966|ref|YP_004051077.1| dead/deah box helicase domain-containing protein [Calditerrivibrio
nitroreducens DSM 19672]
gi|312939722|gb|ADR18914.1| DEAD/DEAH box helicase domain protein [Calditerrivibrio
nitroreducens DSM 19672]
Length = 528
Score = 209 bits (533), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 133/367 (36%), Positives = 208/367 (56%), Gaps = 24/367 (6%)
Query: 380 RFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEG-KDAVVKAKTGTGKSIAFLLPAI 438
+F E G+S +KAL+ G+ + T +QE + L+G +D V +A+TGTGK+ AF LP I
Sbjct: 6 KFKELGLSENVLKALSKKGFEEPTPIQELVIPKLLQGERDIVGQAQTGTGKTAAFGLPLI 65
Query: 439 EAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
E + + P + ++L PTRELA Q+A E +L K + ++ + GG ++
Sbjct: 66 ELLDDKS--------PFVQAIVLTPTRELALQVAEEMNSL-KGKKRLNIVPIYGGQSMEL 116
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
RRLE++ I+V TPGR++DHI K+ +RL LK +VLDEAD +L++GF +D+E I
Sbjct: 117 QLRRLENN-AHIVVGTPGRVIDHINRKT---LRLNKLKFMVLDEADEMLNMGFIEDIEEI 172
Query: 559 VDCLPRRRQSLLFSATMPKELVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQIL 618
+ ++ LLFSATMPKE +L Y+ + +V+T KQ +++FQ+
Sbjct: 173 IKHTNEDKRMLLFSATMPKE-ILNIAKKYMKDYEVLAVKT----KQLTTELTEQIYFQVR 227
Query: 619 HHLLKEHILGTPD----YKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRIS 674
E + D + ++FC T + + L + N ++ Q R+RI
Sbjct: 228 EEDKFEALCRIRDMEKEFYGLIFCRTKVDVDTVCNRLIDRGYNAEALHGDISQYQRERIL 287
Query: 675 EEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLL 734
+ F+A + +LV +DV+ARG+D D+T V+ +P D E Y+HR+GRTGR GKEG +
Sbjct: 288 KRFKAKQINMLVATDVAARGIDISDLTHVINYSLPQDPESYVHRIGRTGRAGKEGTAITF 347
Query: 735 LAPWEEY 741
+ P EEY
Sbjct: 348 VTP-EEY 353
>gi|224824946|ref|ZP_03698052.1| DEAD/DEAH box helicase domain protein [Pseudogulbenkiania
ferrooxidans 2002]
gi|224602617|gb|EEG08794.1| DEAD/DEAH box helicase domain protein [Pseudogulbenkiania
ferrooxidans 2002]
Length = 438
Score = 209 bits (533), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 136/360 (37%), Positives = 200/360 (55%), Gaps = 21/360 (5%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F + G++P AL AAGY T VQ A++ A L G D +V A+TG+GK+ AFLLP+++
Sbjct: 3 FADLGLAPAITSALDAAGYTTPTPVQAASIPAALAGHDLLVSAQTGSGKTAAFLLPSLQ- 61
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
K T ST P +L+L PTRELA Q+ A + + LVGG F Q
Sbjct: 62 --KLTERSTGSGQGP-RILVLTPTRELAQQVEKNATEYGSQLRWLRTVCLVGGASFGY-Q 117
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
R + P I+VATPGRL+DH+ +SG + L+ML+LDEAD +LD+GF +D+E IV
Sbjct: 118 IRAMARPVDIMVATPGRLMDHM--RSG-RIDFSRLEMLILDEADRMLDMGFIEDIETIVK 174
Query: 561 CLPRRRQSLLFSATMPKEL-----VLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHF 615
P RQ++LFSAT+ + L R+ I+ + ET I++ L A H
Sbjct: 175 ATPDSRQTVLFSATLDGTVGKLAQKLTRDPQRIE---IAREETGGNIEEHLLYADDNRHK 231
Query: 616 Q-ILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRIS 674
+ +L H+LKE + ++F +T + + L L + ++ PQ +R+R
Sbjct: 232 ERLLDHILKEAGFD----QAVIFTATKIGSEELADKLSDQGYAAACLHGDMPQNWRNRTL 287
Query: 675 EEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLL 734
+ R + ILV +DV+ARG+D P +T VV +P E Y+HR+GRTGR G++G + L
Sbjct: 288 NDLRRGRVRILVATDVAARGIDVPTITHVVNYDLPKQAEDYVHRIGRTGRAGRDGVAITL 347
>gi|358010394|ref|ZP_09142204.1| ATP-dependent RNA helicase [Acinetobacter sp. P8-3-8]
Length = 633
Score = 209 bits (532), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 127/365 (34%), Positives = 199/365 (54%), Gaps = 19/365 (5%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
K F E + KAL + G+ T VQE ++ A LEGKD +V ++TG+GK+ AFLLP +
Sbjct: 3 KTFAEFSLDESLQKALESLGFTTPTPVQEQSIPAALEGKDLLVSSQTGSGKTAAFLLPTL 62
Query: 439 EAVLKATS----SSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGT 494
A+ + + V +L++ PTRELA Q+ +AIA +++ G+ V ++GG
Sbjct: 63 NALAGQETFVPFKERMKAVTQPNILVISPTRELAQQVCQDAIAFVRHMKGVRVAAIMGGM 122
Query: 495 RFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKD 554
F ++L+ Q++VATPGRLLD + + ++L + L++DEAD +LDLGF +D
Sbjct: 123 PFGKQIQQLKG--AQVVVATPGRLLDLVNRRQ---IKLDLVDALIVDEADRMLDLGFSED 177
Query: 555 VENIVDCLPRRRQSLLFSATMPKELVLKREHTYIDTVGLGSVETPVKIKQSCLVAPH--- 611
+E I D R+Q+L+FSAT ++ E D + ++ET H
Sbjct: 178 LEAISDLALNRKQTLMFSATFAPRIINLAERMMNDPQRI-AIETGHSTNTDITQTLHWTD 236
Query: 612 --ELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLY 669
E ++L H L E + + +VF ST T +L L E ++V ++ PQ
Sbjct: 237 GFEHKKKLLTHWLSEEDVD----QAVVFASTQEDTDMLAEELAEAGLSVVALHGAMPQTV 292
Query: 670 RDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEG 729
R+R R + ILV +DV+ARG+D P ++ V+ G+P E Y+HR+GRTGR G+ G
Sbjct: 293 RNRRLRSIREGRAKILVATDVAARGLDVPTISHVINFGLPMKNEDYVHRIGRTGRAGRTG 352
Query: 730 EGVLL 734
+ + L
Sbjct: 353 KAITL 357
>gi|322701716|gb|EFY93465.1| ATP-dependent RNA helicase mss116 precursor [Metarhizium acridum
CQMa 102]
Length = 652
Score = 209 bits (532), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 143/370 (38%), Positives = 208/370 (56%), Gaps = 34/370 (9%)
Query: 399 YIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLVP---- 454
Y MT VQ T++ L+G D V +AKTGTGK++AFLLP ++ +++ + T+
Sbjct: 100 YEAMTPVQSKTINPALKGTDIVAQAKTGTGKTLAFLLPLLQRMIEEDPTLATRRASRSAR 159
Query: 455 --PIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILV 512
I ++L PTRELA QIAAEA L K + G+ V + VGGT R+ + C +LV
Sbjct: 160 SDDIRGIVLSPTRELAEQIAAEARRLTK-YTGLVVQSAVGGTHKGSMLRQTQRQGCHLLV 218
Query: 513 ATPGRLLDHIEN-KSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRR----RQ 567
ATPGRL D +++ +SG+ L LVLDEAD +LD+GF K++ I CLP R RQ
Sbjct: 219 ATPGRLNDLLQDPQSGIEA--PNLAALVLDEADRMLDVGFEKEIGEITRCLPSRDEKTRQ 276
Query: 568 SLLFSATMPKELV-LKR------EHTYIDTVGLGSVETPVKIKQSC--LVAPHELHFQIL 618
++L SAT+P +++ L R + +I T+ T ++ Q L + + + +
Sbjct: 277 TMLVSATIPDDVIRLARTMVRPDDFEFIQTISENESLTHDRVPQHVVPLTSWNNVFPSLF 336
Query: 619 HHLLKEHILGT-----PDYKVIVFCSTG----MVTSLLYLLLRE--MKMNVREMYSRKPQ 667
+ +E P +K IV+ +T M L + R MK+ + S+ Q
Sbjct: 337 ELIDRESAKAAEDRSLPPFKAIVYFNTTSLVEMGAELGFHRRRNGLMKIPTFSIQSQLTQ 396
Query: 668 LYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGK 727
R R ++ FR ++ +L +SDV+ARGMD+P+VT V+QV P DRE YIHRLGRT R+ K
Sbjct: 397 NQRTRAADMFRHARSGVLFSSDVTARGMDFPNVTHVIQVDTPRDRESYIHRLGRTARQNK 456
Query: 728 EGEGVLLLAP 737
GEG LLL P
Sbjct: 457 GGEGWLLLPP 466
>gi|195453216|ref|XP_002073690.1| GK14240 [Drosophila willistoni]
gi|194169775|gb|EDW84676.1| GK14240 [Drosophila willistoni]
Length = 663
Score = 209 bits (532), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 154/490 (31%), Positives = 261/490 (53%), Gaps = 50/490 (10%)
Query: 363 NGEKKEKREEEPI--------LSQKRFDECGISPL-------TIKALTAAGYIQMTRVQE 407
NG+K + ++ P L Q+ D+ S L T++ + G+ +MT +Q
Sbjct: 141 NGKKNDNNDDTPFTVESSLSALDQRDSDDRSFSSLKGCVSEATLQGIQEMGFTEMTEIQS 200
Query: 408 ATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLVP--PIYVLILCPTR 465
+++ L+G+D V A+TG+GK++AFL+PA+E + K + +P V+I+ PTR
Sbjct: 201 KSITPLLKGRDLVGAAQTGSGKTLAFLIPAVELINK------LRFMPRNGTGVIIISPTR 254
Query: 466 ELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENK 525
EL+ Q L+ +H L + GG+ +V+ +L ILVATPGRLLDH++N
Sbjct: 255 ELSMQTFGVLKELMAHHHHTYGLVM-GGSNRQVESEKL-GKGINILVATPGRLLDHLQNS 312
Query: 526 SGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQSLLFSATMP------KEL 579
+ L+ L++DE D +L++GF ++++ I++ LP RRQ++LFSAT +L
Sbjct: 313 PDFLYK--NLQCLIIDEVDRILEIGFEEELKQIINLLPTRRQTMLFSATQTARIDALSKL 370
Query: 580 VLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCS 639
LK+E Y+ + T ++Q +V P E +L LK++ KV+VF S
Sbjct: 371 ALKKEPIYVGVHDNEANATVEGLEQGYIVCPSEKRLLVLFTFLKKN----RKKKVMVFFS 426
Query: 640 TGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPD 699
+ M + L + + V ++ ++ Q R +F ++ IL+ +DV+ARG+D P
Sbjct: 427 SCMSVKYHHELFNYIDLPVTSIHGKQKQTKRTTTFFQFCNAESGILLCTDVAARGLDIPQ 486
Query: 700 VTSVVQVGIPPDREQYIHRLGRTGR-EGKEGEGVLLLAPWEEYFLDDLK--DLPLDKLQL 756
V +VQ P D +YIHR+GRT R G+ G +LL+ P E FL LK +PL++ +
Sbjct: 487 VDWIVQYDPPDDPREYIHRVGRTARGSGQSGHALLLMRPEELGFLRYLKAAKVPLNEFEF 546
Query: 757 PHLN-PEIQLQMDNHMAK---IDNNVKEAAYHAWLGYYNS--IREIGRDKTTLVELANKF 810
+IQLQ++ +AK ++ + KE A+ +++ Y+S +++I T ++
Sbjct: 547 SWQKIVDIQLQLEKLIAKNYFLNQSAKE-AFKSYVRAYDSHQLKQIFNVNTLDLQAV--- 602
Query: 811 AQSIGLQRPP 820
A+S G PP
Sbjct: 603 AKSFGFLVPP 612
>gi|7022744|dbj|BAA91709.1| unnamed protein product [Homo sapiens]
Length = 670
Score = 209 bits (532), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 154/452 (34%), Positives = 244/452 (53%), Gaps = 43/452 (9%)
Query: 390 TIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLK---ATS 446
T+KA+ G+ MT +Q ++ LEG+D + AKTG+GK++AFL+PA+E ++K T
Sbjct: 190 TLKAIKEMGFTNMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPAVELIVKLRFMTR 249
Query: 447 SSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESD 506
+ T VLIL PTRELA Q L+ +H L ++GG+ + ++L +
Sbjct: 250 NGTG-------VLILSPTRELAMQTFGVLKELMTHHVHTYGL-IMGGSNRSAEAQKL-GN 300
Query: 507 PCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRR 566
I+VATPGRLLDH++N G + L+ LV+DEAD +LD+GF ++++ I+ LP RR
Sbjct: 301 GINIIVATPGRLLDHMQNTPGFMYK--NLQCLVIDEADRILDVGFEEELKQIIKLLPTRR 358
Query: 567 QSLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILHH 620
Q++LFSAT ++ + LK+E Y+ + T ++Q +V P E F +L
Sbjct: 359 QTMLFSATQTRKVEDLARISLKKEPLYVGVDDDKANATVDGLEQGYVVCPSEKRFLLLFT 418
Query: 621 LLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEFRAS 680
LK++ K++VF S+ M Y LL + + V ++ ++ Q R +F +
Sbjct: 419 FLKKN----RKKKLMVFFSSCMSVKYHYELLNYIDLPVLAIHGKQKQNKRTTTFFQFCNA 474
Query: 681 KRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEG--VLLLAPW 738
L+ +DV+ARG+D P+V +VQ P D ++YIHR+GRT R G G G +L+L P
Sbjct: 475 DSGTLLCTDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTAR-GLNGRGHALLILRPE 533
Query: 739 EEYFLDDLKD--LPLDKLQLPHLN-PEIQLQMDNHMAKIDNNVKEAAYHAWLGYYNSIRE 795
E FL LK +PL + +IQ Q++ + K + + ++A A+ Y IR
Sbjct: 534 ELGFLRYLKQSKVPLSEFDFSWSKISDIQSQLEKLIEK-NYFLHKSAQEAYKSY---IR- 588
Query: 796 IGRDKTTLVELAN-------KFAQSIGLQRPP 820
D +L ++ N + A S G + PP
Sbjct: 589 -AYDSHSLKQIFNVNNLNLPQVALSFGFKVPP 619
>gi|385239052|ref|YP_005800391.1| superfamily II DNA/RNA helicase [Acinetobacter baumannii
TCDC-AB0715]
gi|387122460|ref|YP_006288342.1| DNA/RNA helicase [Acinetobacter baumannii MDR-TJ]
gi|407934207|ref|YP_006849850.1| DNA/RNA helicase [Acinetobacter baumannii TYTH-1]
gi|416146923|ref|ZP_11601470.1| superfamily II DNA/RNA helicase [Acinetobacter baumannii AB210]
gi|421704883|ref|ZP_16144324.1| DNA/RNA helicase [Acinetobacter baumannii ZWS1122]
gi|421708662|ref|ZP_16148035.1| DNA/RNA helicase [Acinetobacter baumannii ZWS1219]
gi|323519553|gb|ADX93934.1| superfamily II DNA/RNA helicase [Acinetobacter baumannii
TCDC-AB0715]
gi|333365879|gb|EGK47893.1| superfamily II DNA/RNA helicase [Acinetobacter baumannii AB210]
gi|385876952|gb|AFI94047.1| DNA/RNA helicase, superfamily II [Acinetobacter baumannii MDR-TJ]
gi|407188976|gb|EKE60204.1| DNA/RNA helicase [Acinetobacter baumannii ZWS1122]
gi|407189390|gb|EKE60616.1| DNA/RNA helicase [Acinetobacter baumannii ZWS1219]
gi|407902788|gb|AFU39619.1| DNA/RNA helicase [Acinetobacter baumannii TYTH-1]
Length = 606
Score = 209 bits (532), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 128/379 (33%), Positives = 202/379 (53%), Gaps = 19/379 (5%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
K F E + +AL G+ T VQE ++ A LEGKD +V ++TG+GK+ AFLLP +
Sbjct: 3 KTFAEFSLHETLQQALEGLGFTNPTPVQEQSIPAALEGKDLLVSSQTGSGKTAAFLLPTL 62
Query: 439 EAVLKATS----SSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGT 494
+ + + V +L+LCPTRELA Q++ +AIA +++ G+ + ++GG
Sbjct: 63 HNLAGQDTFVPFKERMKAVTQPSILVLCPTRELAQQVSQDAIAFVRHMKGVRIAAIMGGM 122
Query: 495 RFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKD 554
F ++L+ Q++VATPGRLLD + + ++L + L++DEAD +LDLGF +D
Sbjct: 123 PFGKQIQQLKG--AQVVVATPGRLLDLVNRRQ---LKLDKVDALIVDEADRMLDLGFSED 177
Query: 555 VENIVDCLPRRRQSLLFSATMPKELVLKREHTYIDTVGLGSVETPVKIKQSCLVAPH--- 611
+E I D R Q+L+FSAT ++ E + + ++ET H
Sbjct: 178 LEAISDLAANRGQTLMFSATFADRIIRLAERMMNEPERI-AIETGHSTNTDITQTLHWTD 236
Query: 612 --ELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLY 669
E ++L H L + L + +VF ST T +L L E +V ++ PQ
Sbjct: 237 GFEHKKKLLTHWLADETLD----QAVVFASTQEDTDMLAEELAEAGHSVVALHGAMPQTV 292
Query: 670 RDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEG 729
R+R R + ILV +DV+ARG+D P ++ V+ G+P E Y+HR+GRTGR G+ G
Sbjct: 293 RNRRLRSIREGRAKILVATDVAARGLDVPTISHVINFGLPMKHEDYVHRIGRTGRAGRTG 352
Query: 730 EGVLLLAPWEEYFLDDLKD 748
+ + L E + L+D
Sbjct: 353 QAITLATYRERGKIRALED 371
>gi|396496328|ref|XP_003844718.1| hypothetical protein LEMA_P000260.1 [Leptosphaeria maculans JN3]
gi|312221299|emb|CBY01239.1| hypothetical protein LEMA_P000260.1 [Leptosphaeria maculans JN3]
Length = 613
Score = 209 bits (532), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 155/460 (33%), Positives = 240/460 (52%), Gaps = 39/460 (8%)
Query: 380 RFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIE 439
+F E +S T++A+ G+ MT +Q+ T+ L GKD + AKTG+GK++AFL+PAIE
Sbjct: 135 KFSELNLSDRTMEAIKNMGFETMTEIQQKTIPPLLSGKDVLGAAKTGSGKTLAFLIPAIE 194
Query: 440 AVLKATSSSTTQLVP--PIYVLILCPTRELASQIAAEAIALLKNHD-GIGVLTLVGGTRF 496
+ S + P V+++ PTRELA QI A L++ H G+ ++GG
Sbjct: 195 ML------SAMRFKPRNGTGVIVVSPTRELALQIFGVARELMEKHSQTFGI--VIGGANR 246
Query: 497 KVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVE 556
+ + +L +L+ATPGRLLDH+ N G + LK L++DEAD +L++GF ++
Sbjct: 247 RAEAEKLVKG-VNLLIATPGRLLDHLHNTQGFVFK--NLKSLIIDEADRILEVGFEDEMR 303
Query: 557 NIVDCLPRRRQSLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSCLVAP 610
+++ LP RQ++LFSAT + + LK YI+ T ++Q ++
Sbjct: 304 SVIKILPSDRQTMLFSATQTTKVEDLARISLKPGPLYINVDYRKEHSTVEGLEQGYVICD 363
Query: 611 HELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYR 670
+ F++L LK+H KVIVF S+ LL + + V E++ + Q R
Sbjct: 364 SDTRFRLLFSFLKKH----QKKKVIVFFSSCNSVKFYAELLNYIDLPVLELHGKLKQQVR 419
Query: 671 DRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGE 730
EF + L+ +DV+ARG+D P+V V+Q P D YIHR+GRT R G +G+
Sbjct: 420 TNRFFEFCNATSGTLICTDVAARGLDIPEVDWVIQFDPPDDPRDYIHRVGRTAR-GSDGK 478
Query: 731 G--VLLLAPWEEYFLDDLKD--LPLDKLQLPH---LNPEIQLQMDNHMAKIDNNVKEAAY 783
G ++ L P E FL LK+ +PL + +LP LN + QL+ N + Y
Sbjct: 479 GRSLMFLLPSEIGFLKLLKEARVPLVEFELPANKILNIQSQLEALISKNYYLNKSAKDGY 538
Query: 784 HAWLGYY--NSIREI-GRDKTTLVELANKFAQSIGLQRPP 820
++L Y +S+R + K LV K A+S G PP
Sbjct: 539 RSYLQAYASHSLRSVFDVHKLDLV----KVAKSFGFSTPP 574
>gi|342218233|ref|ZP_08710855.1| DEAD-box ATP-dependent RNA helicase CshA [Megasphaera sp. UPII
135-E]
gi|341590668|gb|EGS33904.1| DEAD-box ATP-dependent RNA helicase CshA [Megasphaera sp. UPII
135-E]
Length = 515
Score = 209 bits (532), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 147/430 (34%), Positives = 224/430 (52%), Gaps = 32/430 (7%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
++F IS ++AL G+ + T +Q + L+G+D + +A+TGTGK+ AF +P +
Sbjct: 3 EKFQNLNISTTILQALNTMGFEEPTPIQAEAIPVALQGQDMIGQAQTGTGKTAAFGIPVL 62
Query: 439 EAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
E +L ++ +S Q ++L PTRELA Q+A E + L + I L + GG +
Sbjct: 63 EKILASSKTSNVQ------TIVLSPTRELAMQVAEE-LNHLAQYTSIQALPIYGGQDMER 115
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
RRL P QI+VATPGRL+DH+ K G ++ L + +VLDEAD +LD+GF D+ I
Sbjct: 116 QLRRLRKHP-QIIVATPGRLIDHM--KRG-TIHLDEISTIVLDEADEMLDMGFIDDIHTI 171
Query: 559 VDCLPRRRQSLLFSATMPKELVLKREHTYI---DTVGLGSVETPVK-IKQSCLVAPHELH 614
+ P RQ+LLFSATMP + K T++ + + + E + I+QS + P
Sbjct: 172 MSATPETRQTLLFSATMPAP-IQKLAQTFLKDPQIIRMKAKEVTMDLIEQSYIETPDRQK 230
Query: 615 FQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRIS 674
F +L LL L PD I+F T L L++ + ++ Q RD +
Sbjct: 231 FDVLCRLLD---LQEPDL-AIIFVRTKRRVDELSEALKKRGYSSEGIHGDLTQAKRDSVI 286
Query: 675 EEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLL 734
+FR ILV +DV+ARG+D VT V +P D E Y+HR+GRTGR GK GE
Sbjct: 287 RQFREKTIDILVATDVAARGLDISGVTHVFNYDLPQDPESYVHRVGRTGRAGKTGEATTF 346
Query: 735 LAPWEEYFLDDLKDL---PLDKLQLPHLNPEI----QLQMDNHMAKIDNNVKEAAYHA-- 785
+ P E L ++ L + + Q P L + Q + N +A ++ +AY A
Sbjct: 347 VIPRELEHLRAIERLIKRHIVRHQAPTLAEALEGAQQTAIRNLIATVEEQ-SASAYRANA 405
Query: 786 --WLGYYNSI 793
L +Y+S+
Sbjct: 406 EELLSHYDSV 415
>gi|114580554|ref|XP_515753.2| PREDICTED: ATP-dependent RNA helicase DDX18 isoform 3 [Pan
troglodytes]
gi|410222574|gb|JAA08506.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 18 [Pan troglodytes]
gi|410256514|gb|JAA16224.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 18 [Pan troglodytes]
gi|410298538|gb|JAA27869.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 18 [Pan troglodytes]
gi|410336501|gb|JAA37197.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 18 [Pan troglodytes]
Length = 670
Score = 209 bits (532), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 153/451 (33%), Positives = 245/451 (54%), Gaps = 41/451 (9%)
Query: 390 TIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSST 449
T+KA+ G+ MT +Q ++ LEG+D + AKTG+GK++AFL+PA+E ++K
Sbjct: 190 TLKAIKEMGFTNMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPAVELIVK------ 243
Query: 450 TQLVP--PIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDP 507
+ +P VLIL PTRELA Q L+ +H L ++GG+ + ++L ++
Sbjct: 244 LRFMPRNGTGVLILSPTRELAMQTFGVLKELMTHHVHTYGL-IMGGSNRSAEAQKL-ANG 301
Query: 508 CQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQ 567
I+VATPGRLLDH++N G + L+ LV+DEAD +LD+GF ++++ I+ LP RRQ
Sbjct: 302 INIIVATPGRLLDHMQNTPGFMYK--NLQCLVIDEADRILDVGFEEELKQIIKLLPTRRQ 359
Query: 568 SLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILHHL 621
++LFSAT ++ + LK+E Y+ + T ++Q +V P E F +L
Sbjct: 360 TMLFSATQTRKVEDLARISLKKEPLYVGVDDDKANATVDGLEQGYVVCPSEKRFLLLFTF 419
Query: 622 LKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEFRASK 681
LK++ K++VF S+ M Y LL + + V ++ ++ Q R +F +
Sbjct: 420 LKKN----RKKKLMVFFSSCMSVKYHYELLNYIDLPVLAIHGKQKQNKRTTTFFQFCNAD 475
Query: 682 RLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEG--VLLLAPWE 739
L+ +DV+ARG+D P+V +VQ P D ++YIHR+GRT R G G G +L+L P E
Sbjct: 476 SGTLLCTDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTAR-GLNGRGHALLILRPEE 534
Query: 740 EYFLDDLKD--LPLDKLQLPHLN-PEIQLQMDNHMAKIDNNVKEAAYHAWLGYYNSIREI 796
FL LK +PL + +IQ Q++ + K + + ++A A+ Y IR
Sbjct: 535 LGFLRYLKQSKVPLSEFDFSWSKISDIQSQLEKLIEK-NYFLHKSAQEAYKSY---IR-- 588
Query: 797 GRDKTTLVELAN-------KFAQSIGLQRPP 820
D +L ++ N + A S G + PP
Sbjct: 589 AYDSHSLKQIFNVNNLNLPQVALSFGFKVPP 619
>gi|169794570|ref|YP_001712363.1| ATP-dependent RNA helicase [Acinetobacter baumannii AYE]
gi|260557002|ref|ZP_05829219.1| DEAD/DEAH box helicase [Acinetobacter baumannii ATCC 19606 = CIP
70.34]
gi|169147497|emb|CAM85358.1| putative ATP-dependent RNA helicase [Acinetobacter baumannii AYE]
gi|260409608|gb|EEX02909.1| DEAD/DEAH box helicase [Acinetobacter baumannii ATCC 19606 = CIP
70.34]
Length = 619
Score = 209 bits (532), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 128/379 (33%), Positives = 202/379 (53%), Gaps = 19/379 (5%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
K F E + +AL G+ T VQE ++ A LEGKD +V ++TG+GK+ AFLLP +
Sbjct: 7 KTFAEFSLHETLQQALEGLGFTNPTPVQEQSIPAALEGKDLLVSSQTGSGKTAAFLLPTL 66
Query: 439 EAVLKATS----SSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGT 494
+ + + V +L+LCPTRELA Q++ +AIA +++ G+ + ++GG
Sbjct: 67 HNLAGQDTFVPFKERMKAVTQPSILVLCPTRELAQQVSQDAIAFVRHMKGVRIAAIMGGM 126
Query: 495 RFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKD 554
F ++L+ Q++VATPGRLLD + + ++L + L++DEAD +LDLGF +D
Sbjct: 127 PFGKQIQQLKG--AQVVVATPGRLLDLVNRRQ---LKLDKVDALIVDEADRMLDLGFSED 181
Query: 555 VENIVDCLPRRRQSLLFSATMPKELVLKREHTYIDTVGLGSVETPVKIKQSCLVAPH--- 611
+E I D R Q+L+FSAT ++ E + + ++ET H
Sbjct: 182 LEAISDLAANRGQTLMFSATFADRIIRLAERMMNEPERI-AIETGHSTNTDITQTLHWTD 240
Query: 612 --ELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLY 669
E ++L H L + L + +VF ST T +L L E +V ++ PQ
Sbjct: 241 GFEHKKKLLTHWLADETLD----QAVVFASTQEDTDMLAEELAEAGHSVVALHGAMPQTV 296
Query: 670 RDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEG 729
R+R R + ILV +DV+ARG+D P ++ V+ G+P E Y+HR+GRTGR G+ G
Sbjct: 297 RNRRLRSIREGRAKILVATDVAARGLDVPTISHVINFGLPMKHEDYVHRIGRTGRAGRTG 356
Query: 730 EGVLLLAPWEEYFLDDLKD 748
+ + L E + L+D
Sbjct: 357 QAITLATYRERGKIRALED 375
>gi|76675332|ref|XP_597469.2| PREDICTED: ATP-dependent RNA helicase DDX18 isoform 1 [Bos taurus]
gi|297471793|ref|XP_002685472.1| PREDICTED: ATP-dependent RNA helicase DDX18 [Bos taurus]
gi|296490513|tpg|DAA32626.1| TPA: DEAD (Asp-Glu-Ala-Asp) box polypeptide 18 [Bos taurus]
Length = 671
Score = 209 bits (532), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 145/418 (34%), Positives = 233/418 (55%), Gaps = 30/418 (7%)
Query: 390 TIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSST 449
T+KA+ G+ MT +Q ++ LEG+D + AKTG+GK++AFL+PA+E ++K
Sbjct: 191 TLKAIKEMGFTNMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPAVELIVK------ 244
Query: 450 TQLVP--PIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDP 507
+ +P VLIL PTRELA Q L+ +H L ++GG+ + ++L ++
Sbjct: 245 LKFMPRNGTGVLILSPTRELAMQTFGVLKELMTHHVHTYGL-IMGGSNRSAEAQKL-ANG 302
Query: 508 CQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQ 567
I+VATPGRLLDH++N G + L+ LV+DEAD +LD+GF ++++ I+ LP RRQ
Sbjct: 303 INIVVATPGRLLDHMQNTPGFMYK--NLQCLVIDEADRILDVGFEEELKQIIKLLPTRRQ 360
Query: 568 SLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILHHL 621
++LFSAT ++ + LK+E Y+ + T ++Q +V P E F +L
Sbjct: 361 TMLFSATQTRKVEDLARISLKKEPLYVGVDDDKANATVDGLEQGYVVCPSEKRFLLLFTF 420
Query: 622 LKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEFRASK 681
LK++ K++VF S+ Y LL + + V ++ R+ Q R +F +
Sbjct: 421 LKKN----RKKKLMVFFSSCKSVKYHYELLNYIDLPVLAIHGRQKQNKRTTTFFQFCNAD 476
Query: 682 RLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEG--VLLLAPWE 739
IL+ +DV+ARG+D P+V +VQ P D ++YIHR+GRT R G G G +L+L P E
Sbjct: 477 SGILLCTDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTAR-GLNGRGHALLILRPEE 535
Query: 740 EYFLDDLKD--LPLDKLQLPHLN-PEIQLQMDNHMAK--IDNNVKEAAYHAWLGYYNS 792
FL LK +PL + + +IQ Q++ + K + + AY +++ Y+S
Sbjct: 536 LGFLRYLKQSKVPLSEFEFSWSKISDIQSQLEKLIEKNYFLHKSAQEAYKSYIRAYDS 593
>gi|184159623|ref|YP_001847962.1| superfamily II DNA/RNA helicase [Acinetobacter baumannii ACICU]
gi|332876108|ref|ZP_08443892.1| DEAD/DEAH box helicase [Acinetobacter baumannii 6014059]
gi|417570347|ref|ZP_12221204.1| DEAD/DEAH box helicase [Acinetobacter baumannii OIFC189]
gi|417576490|ref|ZP_12227335.1| DEAD/DEAH box helicase [Acinetobacter baumannii Naval-17]
gi|417875137|ref|ZP_12519958.1| ATP-dependent RNA helicase [Acinetobacter baumannii ABNIH2]
gi|417882960|ref|ZP_12527229.1| ATP-dependent RNA helicase [Acinetobacter baumannii ABNIH4]
gi|421629104|ref|ZP_16069854.1| DEAD/DEAH box helicase [Acinetobacter baumannii OIFC180]
gi|421685872|ref|ZP_16125638.1| DEAD/DEAH box helicase [Acinetobacter baumannii IS-143]
gi|421791028|ref|ZP_16227216.1| DEAD/DEAH box helicase [Acinetobacter baumannii Naval-2]
gi|424050835|ref|ZP_17788371.1| hypothetical protein W9G_02727 [Acinetobacter baumannii Ab11111]
gi|425754022|ref|ZP_18871889.1| DEAD/DEAH box helicase [Acinetobacter baumannii Naval-113]
gi|445463866|ref|ZP_21449401.1| DEAD/DEAH box helicase [Acinetobacter baumannii OIFC338]
gi|445478650|ref|ZP_21454773.1| type III restriction enzyme, res subunit / helicase C-terminal
domain multi-domain protein [Acinetobacter baumannii
Naval-78]
gi|183211217|gb|ACC58615.1| Superfamily II DNA and RNA helicase [Acinetobacter baumannii ACICU]
gi|332735726|gb|EGJ66769.1| DEAD/DEAH box helicase [Acinetobacter baumannii 6014059]
gi|342226666|gb|EGT91628.1| ATP-dependent RNA helicase [Acinetobacter baumannii ABNIH2]
gi|342236705|gb|EGU01215.1| ATP-dependent RNA helicase [Acinetobacter baumannii ABNIH4]
gi|395550795|gb|EJG16804.1| DEAD/DEAH box helicase [Acinetobacter baumannii OIFC189]
gi|395569711|gb|EJG30373.1| DEAD/DEAH box helicase [Acinetobacter baumannii Naval-17]
gi|404570899|gb|EKA75971.1| DEAD/DEAH box helicase [Acinetobacter baumannii IS-143]
gi|404669588|gb|EKB37481.1| hypothetical protein W9G_02727 [Acinetobacter baumannii Ab11111]
gi|408703963|gb|EKL49343.1| DEAD/DEAH box helicase [Acinetobacter baumannii OIFC180]
gi|410403906|gb|EKP55980.1| DEAD/DEAH box helicase [Acinetobacter baumannii Naval-2]
gi|425497415|gb|EKU63521.1| DEAD/DEAH box helicase [Acinetobacter baumannii Naval-113]
gi|444774723|gb|ELW98799.1| type III restriction enzyme, res subunit / helicase C-terminal
domain multi-domain protein [Acinetobacter baumannii
Naval-78]
gi|444780215|gb|ELX04181.1| DEAD/DEAH box helicase [Acinetobacter baumannii OIFC338]
Length = 615
Score = 209 bits (532), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 128/379 (33%), Positives = 202/379 (53%), Gaps = 19/379 (5%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
K F E + +AL G+ T VQE ++ A LEGKD +V ++TG+GK+ AFLLP +
Sbjct: 3 KTFAEFSLHETLQQALEGLGFTNPTPVQEQSIPAALEGKDLLVSSQTGSGKTAAFLLPTL 62
Query: 439 EAVLKATS----SSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGT 494
+ + + V +L+LCPTRELA Q++ +AIA +++ G+ + ++GG
Sbjct: 63 HNLAGQDTFVPFKERMKAVTQPSILVLCPTRELAQQVSQDAIAFVRHMKGVRIAAIMGGM 122
Query: 495 RFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKD 554
F ++L+ Q++VATPGRLLD + + ++L + L++DEAD +LDLGF +D
Sbjct: 123 PFGKQIQQLKG--AQVVVATPGRLLDLVNRRQ---LKLDKVDALIVDEADRMLDLGFSED 177
Query: 555 VENIVDCLPRRRQSLLFSATMPKELVLKREHTYIDTVGLGSVETPVKIKQSCLVAPH--- 611
+E I D R Q+L+FSAT ++ E + + ++ET H
Sbjct: 178 LEAISDLAANRGQTLMFSATFADRIIRLAERMMNEPERI-AIETGHSTNTDITQTLHWTD 236
Query: 612 --ELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLY 669
E ++L H L + L + +VF ST T +L L E +V ++ PQ
Sbjct: 237 GFEHKKKLLTHWLADETLD----QAVVFASTQEDTDMLAEELAEAGHSVVALHGAMPQTV 292
Query: 670 RDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEG 729
R+R R + ILV +DV+ARG+D P ++ V+ G+P E Y+HR+GRTGR G+ G
Sbjct: 293 RNRRLRSIREGRAKILVATDVAARGLDVPTISHVINFGLPMKHEDYVHRIGRTGRAGRTG 352
Query: 730 EGVLLLAPWEEYFLDDLKD 748
+ + L E + L+D
Sbjct: 353 QAITLATYRERGKIRALED 371
>gi|119890683|ref|XP_001249975.1| PREDICTED: ATP-dependent RNA helicase DDX18 [Bos taurus]
gi|297473570|ref|XP_002686695.1| PREDICTED: ATP-dependent RNA helicase DDX18 [Bos taurus]
gi|296488716|tpg|DAA30829.1| TPA: DEAD (Asp-Glu-Ala-Asp) box polypeptide 10-like [Bos taurus]
Length = 671
Score = 209 bits (532), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 154/451 (34%), Positives = 246/451 (54%), Gaps = 41/451 (9%)
Query: 390 TIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSST 449
T+KA+ G+ MT +Q ++ LEG+D + AKTG+GK++AFL+PA+E ++K
Sbjct: 191 TLKAIKEMGFTNMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPAVELIVK------ 244
Query: 450 TQLVP--PIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDP 507
+ +P VLIL PTRELA Q L+ +H L ++GG+ + ++L ++
Sbjct: 245 LKFMPRNGTGVLILSPTRELAMQTFGVLKELMTHHVHTYGL-IMGGSNRSAEAQKL-ANG 302
Query: 508 CQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQ 567
I+VATPGRLLDH++N G + L+ LV+DEAD +LD+GF ++++ I+ LP RRQ
Sbjct: 303 INIVVATPGRLLDHMQNTPGFMYK--NLQCLVIDEADRILDVGFEEELKQIIKLLPTRRQ 360
Query: 568 SLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILHHL 621
++LFSAT ++ + LK+E Y+ + T ++Q +V P E F +L
Sbjct: 361 TMLFSATQTRKVEDLARISLKKEPLYVGVDDDKANATVDGLEQGYVVCPSEKRFLLLFTF 420
Query: 622 LKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEFRASK 681
LK++ K++VF S+ Y LL + + V ++ R+ Q R +F +
Sbjct: 421 LKKN----RKKKLMVFFSSCKSVKYHYELLNYIDLPVLAIHGRQKQNKRTTTFFQFCNAD 476
Query: 682 RLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEG--VLLLAPWE 739
IL+ +DV+ARG+D P+V +VQ P D ++YIHR+GRT R G G G +L+L P E
Sbjct: 477 SGILLCTDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTAR-GLNGRGHALLILRPEE 535
Query: 740 EYFLDDLKD--LPLDKLQLPHLN-PEIQLQMDNHMAKIDNNVKEAAYHAWLGYYNSIREI 796
FL LK +PL + + +IQ Q++ + K + + ++A A+ Y IR
Sbjct: 536 LGFLRYLKQSKVPLSEFEFSWSKISDIQSQLEKLIEK-NYFLHKSAQEAYKSY---IR-- 589
Query: 797 GRDKTTLVELAN-------KFAQSIGLQRPP 820
D +L ++ N + A S G + PP
Sbjct: 590 AYDSHSLKQIFNVNNLNLPQVALSFGFKVPP 620
>gi|12654791|gb|AAH01238.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 18 [Homo sapiens]
gi|13097183|gb|AAH03360.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 18 [Homo sapiens]
gi|19353239|gb|AAH24739.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 18 [Homo sapiens]
Length = 670
Score = 209 bits (532), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 153/451 (33%), Positives = 244/451 (54%), Gaps = 41/451 (9%)
Query: 390 TIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSST 449
T+KA+ G+ MT +Q ++ LEG+D + AKTG+GK++AFL+PA+E ++K
Sbjct: 190 TLKAIKEMGFTNMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPAVELIVKL----- 244
Query: 450 TQLVP--PIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDP 507
+ +P VLIL PTRELA Q L+ +H L ++GG+ + ++L +
Sbjct: 245 -RFMPRNGTGVLILSPTRELAMQTFGVLKELMTHHVHTYGL-IMGGSNRSAEAQKL-GNG 301
Query: 508 CQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQ 567
I+VATPGRLLDH++N G + L+ LV+DEAD +LD+GF ++++ I+ LP RRQ
Sbjct: 302 INIIVATPGRLLDHMQNTPGFMYK--NLQCLVIDEADRILDVGFEEELKQIIKLLPTRRQ 359
Query: 568 SLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILHHL 621
++LFSAT ++ + LK+E Y+ + T ++Q +V P E F +L
Sbjct: 360 TMLFSATQTRKVEDLARISLKKEPLYVGVDDDKANATVDGLEQGYVVCPSEKRFLLLFTF 419
Query: 622 LKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEFRASK 681
LK++ K++VF S+ M Y LL + + V ++ ++ Q R +F +
Sbjct: 420 LKKN----RKKKLMVFFSSCMSVKYHYELLNYIDLPVLAIHGKQKQNKRTTTFFQFCNAD 475
Query: 682 RLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEG--VLLLAPWE 739
L+ +DV+ARG+D P+V +VQ P D ++YIHR+GRT R G G G +L+L P E
Sbjct: 476 SGTLLCTDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTAR-GLNGRGHALLILRPEE 534
Query: 740 EYFLDDLKD--LPLDKLQLPHLN-PEIQLQMDNHMAKIDNNVKEAAYHAWLGYYNSIREI 796
FL LK +PL + +IQ Q++ + K + + ++A A+ Y IR
Sbjct: 535 LGFLRYLKQSKVPLSEFDFSWSKISDIQSQLEKLIEK-NYFLHKSAQEAYKSY---IR-- 588
Query: 797 GRDKTTLVELAN-------KFAQSIGLQRPP 820
D +L ++ N + A S G + PP
Sbjct: 589 AYDSHSLKQIFNVNNLNLPQVALSFGFKVPP 619
>gi|410456811|ref|ZP_11310665.1| DEAD/DEAH box helicase [Bacillus bataviensis LMG 21833]
gi|409927363|gb|EKN64500.1| DEAD/DEAH box helicase [Bacillus bataviensis LMG 21833]
Length = 450
Score = 209 bits (532), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 138/378 (36%), Positives = 202/378 (53%), Gaps = 26/378 (6%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F GIS + L G + T +QE + + G D + +A+TGTGK+ AF+LP +E
Sbjct: 4 FLSLGISETVVNQLRGYGVAKPTPIQEQAIPFVMNGNDIIAQAQTGTGKTFAFILPILEK 63
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+ K + I LI+ PTRELA QI AE L+ + G+ VL GG
Sbjct: 64 IDKDAAH--------IQALIVTPTRELALQITAEIEKLIADLPGVAVLAAYGGQDVDKQL 115
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
++L+ +P QI+V TPGRLLDHI ++ VRL + LVLDEAD +L +GF +VE+I+
Sbjct: 116 KKLKRNP-QIVVGTPGRLLDHIRRET---VRLSEISFLVLDEADQMLHIGFLGEVEDIIR 171
Query: 561 CLPRRRQSLLFSATMPKE---LVLK--REHTYIDTVGLGSVETPVK-IKQSCLVAPHELH 614
P RQ++LFSATMP E L K R+ YI + + P + +KQ +
Sbjct: 172 ETPVTRQTMLFSATMPPEIRKLAAKHMRDPEYIQ---IEKTQGPAENVKQMAIHTTDRAK 228
Query: 615 FQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRIS 674
+ L L++ H + ++FC T S LY L+ E++ Q R+++
Sbjct: 229 QETLIDLIETH----RPFLAVIFCRTKRRVSKLYDALKAHGFPSDELHGDLSQAKREQVM 284
Query: 675 EEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLL 734
+ FR ++ +LV +DV+ARG+D VT V IP D E YIHR+GRTGR G G + L
Sbjct: 285 KRFRDAEIQLLVATDVAARGLDVEGVTHVFNYDIPEDSESYIHRIGRTGRAGMTGLAITL 344
Query: 735 LAPWEEYFLDDL-KDLPL 751
A ++ L+ + KDL +
Sbjct: 345 YAAKDKSALELIEKDLKI 362
>gi|384144733|ref|YP_005527443.1| putative ATP-dependent RNA helicase [Acinetobacter baumannii
MDR-ZJ06]
gi|347595226|gb|AEP07947.1| putative ATP-dependent RNA helicase [Acinetobacter baumannii
MDR-ZJ06]
Length = 610
Score = 209 bits (532), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 128/379 (33%), Positives = 202/379 (53%), Gaps = 19/379 (5%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
K F E + +AL G+ T VQE ++ A LEGKD +V ++TG+GK+ AFLLP +
Sbjct: 7 KTFAEFSLHETLQQALEGLGFTNPTPVQEQSIPAALEGKDLLVSSQTGSGKTAAFLLPTL 66
Query: 439 EAVLKATS----SSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGT 494
+ + + V +L+LCPTRELA Q++ +AIA +++ G+ + ++GG
Sbjct: 67 HNLAGQDTFVPFKERMKAVTQPSILVLCPTRELAQQVSQDAIAFVRHMKGVRIAAIMGGM 126
Query: 495 RFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKD 554
F ++L+ Q++VATPGRLLD + + ++L + L++DEAD +LDLGF +D
Sbjct: 127 PFGKQIQQLKG--AQVVVATPGRLLDLVNRRQ---LKLDKVDALIVDEADRMLDLGFSED 181
Query: 555 VENIVDCLPRRRQSLLFSATMPKELVLKREHTYIDTVGLGSVETPVKIKQSCLVAPH--- 611
+E I D R Q+L+FSAT ++ E + + ++ET H
Sbjct: 182 LEAISDLAANRGQTLMFSATFADRIIRLAERMMNEPERI-AIETGHSTNTDITQTLHWTD 240
Query: 612 --ELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLY 669
E ++L H L + L + +VF ST T +L L E +V ++ PQ
Sbjct: 241 GFEHKKKLLTHWLADETLD----QAVVFASTQEDTDMLAEELAEAGHSVVALHGAMPQTV 296
Query: 670 RDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEG 729
R+R R + ILV +DV+ARG+D P ++ V+ G+P E Y+HR+GRTGR G+ G
Sbjct: 297 RNRRLRSIREGRAKILVATDVAARGLDVPTISHVINFGLPMKHEDYVHRIGRTGRAGRTG 356
Query: 730 EGVLLLAPWEEYFLDDLKD 748
+ + L E + L+D
Sbjct: 357 QAITLATYRERGKIRALED 375
>gi|387273435|gb|AFJ70212.1| ATP-dependent RNA helicase DDX18 [Macaca mulatta]
Length = 670
Score = 209 bits (532), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 153/451 (33%), Positives = 245/451 (54%), Gaps = 41/451 (9%)
Query: 390 TIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSST 449
T+KA+ G+ MT +Q ++ LEG+D + AKTG+GK++AFL+PA+E ++K
Sbjct: 190 TLKAIKEMGFTNMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPAVELIVK------ 243
Query: 450 TQLVP--PIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDP 507
+ +P VLIL PTRELA Q L+ +H L ++GG+ + ++L ++
Sbjct: 244 LKFMPRNGTGVLILSPTRELAMQTFGVLKELMTHHVHTYGL-IMGGSNRSAEAQKL-ANG 301
Query: 508 CQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQ 567
I+VATPGRLLDH++N G + L+ LV+DEAD +LD+GF ++++ I+ LP RRQ
Sbjct: 302 INIIVATPGRLLDHMQNTPGFMYK--NLQCLVIDEADRILDVGFEEELKQIIKLLPTRRQ 359
Query: 568 SLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILHHL 621
++LFSAT ++ + LK+E Y+ + T ++Q +V P E F +L
Sbjct: 360 TMLFSATQTRKVEDLARISLKKEPLYVGVDDDKANATVDGLEQGYVVCPSEKRFLLLFTF 419
Query: 622 LKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEFRASK 681
LK++ K++VF S+ M Y LL + + V ++ ++ Q R +F +
Sbjct: 420 LKKN----RKKKLMVFFSSCMSVKYHYELLNYIDLPVLAIHGKQKQNKRTTTFFQFCNAD 475
Query: 682 RLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEG--VLLLAPWE 739
L+ +DV+ARG+D P+V +VQ P D ++YIHR+GRT R G G G +L+L P E
Sbjct: 476 SGTLLCTDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTAR-GLNGRGHALLILRPEE 534
Query: 740 EYFLDDLKD--LPLDKLQLPHLN-PEIQLQMDNHMAKIDNNVKEAAYHAWLGYYNSIREI 796
FL LK +PL + +IQ Q++ + K + + ++A A+ Y IR
Sbjct: 535 LGFLRYLKQSKVPLSEFDFSWSKISDIQSQLEKLIEK-NYFLHKSAQEAYKSY---IR-- 588
Query: 797 GRDKTTLVELAN-------KFAQSIGLQRPP 820
D +L ++ N + A S G + PP
Sbjct: 589 AYDSHSLKQIFNVNNLNLPQVALSFGFKVPP 619
>gi|380817640|gb|AFE80694.1| ATP-dependent RNA helicase DDX18 [Macaca mulatta]
gi|383422527|gb|AFH34477.1| ATP-dependent RNA helicase DDX18 [Macaca mulatta]
Length = 670
Score = 209 bits (532), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 153/451 (33%), Positives = 245/451 (54%), Gaps = 41/451 (9%)
Query: 390 TIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSST 449
T+KA+ G+ MT +Q ++ LEG+D + AKTG+GK++AFL+PA+E ++K
Sbjct: 190 TLKAIKEMGFTNMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPAVELIVK------ 243
Query: 450 TQLVP--PIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDP 507
+ +P VLIL PTRELA Q L+ +H L ++GG+ + ++L ++
Sbjct: 244 LKFMPRNGTGVLILSPTRELAMQTFGVLKELMTHHVHTYGL-IMGGSNRSAEAQKL-ANG 301
Query: 508 CQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQ 567
I+VATPGRLLDH++N G + L+ LV+DEAD +LD+GF ++++ I+ LP RRQ
Sbjct: 302 INIIVATPGRLLDHMQNTPGFMYK--NLQCLVIDEADRILDVGFEEELKQIIKLLPTRRQ 359
Query: 568 SLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILHHL 621
++LFSAT ++ + LK+E Y+ + T ++Q +V P E F +L
Sbjct: 360 TMLFSATQTRKVEDLARISLKKEPLYVGVDDDKANATVDGLEQGYVVCPSEKRFLLLFTF 419
Query: 622 LKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEFRASK 681
LK++ K++VF S+ M Y LL + + V ++ ++ Q R +F +
Sbjct: 420 LKKN----RKKKLMVFFSSCMSVKYHYELLNYIDLPVLAIHGKQKQNKRTTTFFQFCNAD 475
Query: 682 RLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEG--VLLLAPWE 739
L+ +DV+ARG+D P+V +VQ P D ++YIHR+GRT R G G G +L+L P E
Sbjct: 476 SGTLLCTDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTAR-GLNGRGHALLILRPEE 534
Query: 740 EYFLDDLKD--LPLDKLQLPHLN-PEIQLQMDNHMAKIDNNVKEAAYHAWLGYYNSIREI 796
FL LK +PL + +IQ Q++ + K + + ++A A+ Y IR
Sbjct: 535 LGFLRYLKQSKVPLSEFDFSWSKISDIQSQLEKLIEK-NYFLHKSAQEAYKSY---IR-- 588
Query: 797 GRDKTTLVELAN-------KFAQSIGLQRPP 820
D +L ++ N + A S G + PP
Sbjct: 589 AYDSHSLKQIFNVNNLNLPQVALSFGFKVPP 619
>gi|397496717|ref|XP_003819175.1| PREDICTED: ATP-dependent RNA helicase DDX18 [Pan paniscus]
Length = 670
Score = 209 bits (532), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 153/451 (33%), Positives = 245/451 (54%), Gaps = 41/451 (9%)
Query: 390 TIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSST 449
T+KA+ G+ MT +Q ++ LEG+D + AKTG+GK++AFL+PA+E ++K
Sbjct: 190 TLKAIKEMGFTNMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPAVELIVK------ 243
Query: 450 TQLVP--PIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDP 507
+ +P VLIL PTRELA Q L+ +H L ++GG+ + ++L ++
Sbjct: 244 LRFMPRNGTGVLILSPTRELAMQTFGVLKELMTHHVHTYGL-IMGGSNRSAEAQKL-ANG 301
Query: 508 CQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQ 567
I+VATPGRLLDH++N G + L+ LV+DEAD +LD+GF ++++ I+ LP RRQ
Sbjct: 302 INIIVATPGRLLDHMQNTPGFMYK--NLQCLVIDEADRILDVGFEEELKQIIKLLPTRRQ 359
Query: 568 SLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILHHL 621
++LFSAT ++ + LK+E Y+ + T ++Q +V P E F +L
Sbjct: 360 TMLFSATQTRKVEDLARISLKKEPLYVGVDDDKANATVDGLEQGYVVCPSEKRFLLLFTF 419
Query: 622 LKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEFRASK 681
LK++ K++VF S+ M Y LL + + V ++ ++ Q R +F +
Sbjct: 420 LKKN----RKKKLMVFFSSCMSVKYHYELLNYIDLPVLAIHGKQKQNKRTTTFFQFCNAD 475
Query: 682 RLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEG--VLLLAPWE 739
L+ +DV+ARG+D P+V +VQ P D ++YIHR+GRT R G G G +L+L P E
Sbjct: 476 SGTLLCTDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTAR-GLNGRGHALLILRPEE 534
Query: 740 EYFLDDLKD--LPLDKLQLPHLN-PEIQLQMDNHMAKIDNNVKEAAYHAWLGYYNSIREI 796
FL LK +PL + +IQ Q++ + K + + ++A A+ Y IR
Sbjct: 535 LGFLRYLKQSKVPLSEFDFSWSKISDIQSQLEKLIEK-NYFLHKSAQEAYKSY---IR-- 588
Query: 797 GRDKTTLVELAN-------KFAQSIGLQRPP 820
D +L ++ N + A S G + PP
Sbjct: 589 AYDSHSLKQIFNVNNLNLPQVALSFGFKVPP 619
>gi|46121459|ref|XP_385284.1| hypothetical protein FG05108.1 [Gibberella zeae PH-1]
Length = 670
Score = 209 bits (532), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 170/506 (33%), Positives = 243/506 (48%), Gaps = 86/506 (16%)
Query: 398 GYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAV------LKATSSSTTQ 451
GY MT VQ T+ L+G D V +AKTGTGK++AFLLP ++ + L ++
Sbjct: 96 GYETMTPVQAKTIKPALKGTDIVAQAKTGTGKTMAFLLPLLQRMIAEDPSLAGKNARRQA 155
Query: 452 LVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGT--RFKVDQRRLESDPCQ 509
I ++L PTRELA QIA EA L +N G+ V VGGT R ++Q R + C
Sbjct: 156 RSDDIRGIVLSPTRELAEQIAMEARRLCRN-TGLVVQCAVGGTDKRGMLNQTRRQG--CH 212
Query: 510 ILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRR---- 565
+LVATPGRL D + + G + L LVLDEAD +LD GF +++ IV LPR
Sbjct: 213 LLVATPGRLNDVLADP-GSGIDAPNLAALVLDEADRMLDTGFERELNEIVSQLPRPEEKV 271
Query: 566 RQSLLFSATMP-------KELVLKREHTYIDTVGLGSVETPVKIKQSCL-VAPHELHFQI 617
RQ++L SAT+P + +V + ++ T+ T K+ Q + V+ F
Sbjct: 272 RQTMLVSATIPDSVIRLARSMVRADDFEFVQTIPENESLTHDKVPQHIVPVSSWTQVFPT 331
Query: 618 LHHLL-KEHILGTPD-----YKVIVFCSTGMVTSLLYLLLREMKMNVRE----------M 661
L L+ +EH D +K IV+ +T + L L +M+ N R +
Sbjct: 332 LFELMDREHKKSVEDPNELPFKAIVYLNTTALVELGGELGYQMRQNARNDGKSYLPTYVL 391
Query: 662 YSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGR 721
S+ Q R R ++ FR +K IL +SDV+ARGMD+P+VT V+Q+ P DRE YIHRLGR
Sbjct: 392 QSKMGQNQRQRAADRFREAKSGILFSSDVTARGMDFPNVTHVIQIDTPRDRESYIHRLGR 451
Query: 722 TGREGKEGEGVLLLAPWEEYFLDDLKDLPLDKLQLPHLNPEIQLQMDNHMAKIDNNVKEA 781
TGR+ KEG+G L+ LPH + + +M + N+ E+
Sbjct: 452 TGRQNKEGQGWLI---------------------LPHSSVRVARKMLQGLPIAQNSSLES 490
Query: 782 A-----------YH-------------AWLGYYNSIREIGRDKTTLVELANKFAQ-SIGL 816
A YH Y S+ + DK E NK+ + G
Sbjct: 491 AETDIEGGETTPYHDSTKALFSVVPRDLLAQTYTSMFGLATDKVETAEDVNKWTKHGWGW 550
Query: 817 QRPPPLFRKTALKMGLKDIPGIRLRK 842
PP + KMGL G+ +R+
Sbjct: 551 DTPPFVSSMWVNKMGLARASGMNVRE 576
>gi|422322840|ref|ZP_16403880.1| ATP-dependent RNA helicase [Achromobacter xylosoxidans C54]
gi|317402151|gb|EFV82742.1| ATP-dependent RNA helicase [Achromobacter xylosoxidans C54]
Length = 481
Score = 209 bits (532), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 134/381 (35%), Positives = 200/381 (52%), Gaps = 30/381 (7%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F + G+ PL ++++ GY T +Q + +EG+D + A+TGTGK+ AF LP +
Sbjct: 20 FSDFGLHPLLLQSIAETGYTTPTPIQAQAIPVVVEGRDVMGAAQTGTGKTAAFTLPILHR 79
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
++ ++S + P+ LIL PTRELA Q+ E++ + + GG +
Sbjct: 80 LMPLANTSASPARHPVRALILTPTRELADQVY-ESVKRYSKQTPLRSAVVFGGVDIGPQK 138
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
L C++LVATPGRLLDH+E K+ V L + +LVLDEAD +LD+GF D+E I+
Sbjct: 139 EALRRG-CEVLVATPGRLLDHVEQKN---VNLSQVGILVLDEADRMLDMGFLPDLERIIR 194
Query: 561 CLPRRRQSLLFSATMPKELVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILH- 619
LP +RQ LLFSAT E I +G + PV+I+ + A QI +
Sbjct: 195 LLPAQRQGLLFSATFSNE---------IRKLGRSYLNHPVEIEVAARNATANTITQIAYK 245
Query: 620 -----------HLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQL 668
HL+K L +VIVF +T + T+ L L + ++ K Q
Sbjct: 246 MSGDQKRAAVVHLVKSRGL----KQVIVFSNTKIGTARLARELERDGVKAESIHGDKTQA 301
Query: 669 YRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKE 728
R + E F+A + +LV +DV+ARG+D V V+ +P + E Y+HR+GRTGR G
Sbjct: 302 DRMKALEAFKAGELEVLVATDVAARGLDVAGVPCVINYDLPYNAEDYVHRIGRTGRAGAT 361
Query: 729 GEGVLLLAPWEEYFLDDLKDL 749
GE + L EE FL D++ L
Sbjct: 362 GEAIALFTADEERFLLDIEKL 382
>gi|38327634|ref|NP_006764.3| ATP-dependent RNA helicase DDX18 [Homo sapiens]
gi|20532388|sp|Q9NVP1.2|DDX18_HUMAN RecName: Full=ATP-dependent RNA helicase DDX18; AltName: Full=DEAD
box protein 18; AltName: Full=Myc-regulated DEAD box
protein; Short=MrDb
gi|119615599|gb|EAW95193.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 18, isoform CRA_b [Homo
sapiens]
gi|119615600|gb|EAW95194.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 18, isoform CRA_b [Homo
sapiens]
Length = 670
Score = 209 bits (532), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 153/451 (33%), Positives = 244/451 (54%), Gaps = 41/451 (9%)
Query: 390 TIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSST 449
T+KA+ G+ MT +Q ++ LEG+D + AKTG+GK++AFL+PA+E ++K
Sbjct: 190 TLKAIKEMGFTNMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPAVELIVKL----- 244
Query: 450 TQLVP--PIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDP 507
+ +P VLIL PTRELA Q L+ +H L ++GG+ + ++L +
Sbjct: 245 -RFMPRNGTGVLILSPTRELAMQTFGVLKELMTHHVHTYGL-IMGGSNRSAEAQKL-GNG 301
Query: 508 CQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQ 567
I+VATPGRLLDH++N G + L+ LV+DEAD +LD+GF ++++ I+ LP RRQ
Sbjct: 302 INIIVATPGRLLDHMQNTPGFMYK--NLQCLVIDEADRILDVGFEEELKQIIKLLPTRRQ 359
Query: 568 SLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILHHL 621
++LFSAT ++ + LK+E Y+ + T ++Q +V P E F +L
Sbjct: 360 TMLFSATQTRKVEDLARISLKKEPLYVGVDDDKANATVDGLEQGYVVCPSEKRFLLLFTF 419
Query: 622 LKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEFRASK 681
LK++ K++VF S+ M Y LL + + V ++ ++ Q R +F +
Sbjct: 420 LKKN----RKKKLMVFFSSCMSVKYHYELLNYIDLPVLAIHGKQKQNKRTTTFFQFCNAD 475
Query: 682 RLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEG--VLLLAPWE 739
L+ +DV+ARG+D P+V +VQ P D ++YIHR+GRT R G G G +L+L P E
Sbjct: 476 SGTLLCTDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTAR-GLNGRGHALLILRPEE 534
Query: 740 EYFLDDLKD--LPLDKLQLPHLN-PEIQLQMDNHMAKIDNNVKEAAYHAWLGYYNSIREI 796
FL LK +PL + +IQ Q++ + K + + ++A A+ Y IR
Sbjct: 535 LGFLRYLKQSKVPLSEFDFSWSKISDIQSQLEKLIEK-NYFLHKSAQEAYKSY---IR-- 588
Query: 797 GRDKTTLVELAN-------KFAQSIGLQRPP 820
D +L ++ N + A S G + PP
Sbjct: 589 AYDSHSLKQIFNVNNLNLPQVALSFGFKVPP 619
>gi|445456165|ref|ZP_21445699.1| DEAD/DEAH box helicase [Acinetobacter baumannii OIFC047]
gi|444778696|gb|ELX02706.1| DEAD/DEAH box helicase [Acinetobacter baumannii OIFC047]
Length = 615
Score = 209 bits (532), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 128/379 (33%), Positives = 202/379 (53%), Gaps = 19/379 (5%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
K F E + +AL G+ T VQE ++ A LEGKD +V ++TG+GK+ AFLLP +
Sbjct: 3 KTFAEFSLHETLQQALEGLGFTNPTPVQEQSIPAALEGKDLLVSSQTGSGKTAAFLLPTL 62
Query: 439 EAVLKATS----SSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGT 494
+ + + V +L+LCPTRELA Q++ +AIA +++ G+ + ++GG
Sbjct: 63 HNLAGQDTFVPFKERMKAVTQPSILVLCPTRELAQQVSQDAIAFVRHMKGVRIAAIMGGM 122
Query: 495 RFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKD 554
F ++L+ Q++VATPGRLLD + + ++L + L++DEAD +LDLGF +D
Sbjct: 123 PFGKQIQQLKG--AQVVVATPGRLLDLVNRRQ---LKLDKVDALIVDEADRMLDLGFSED 177
Query: 555 VENIVDCLPRRRQSLLFSATMPKELVLKREHTYIDTVGLGSVETPVKIKQSCLVAPH--- 611
+E I D R Q+L+FSAT ++ E + + ++ET H
Sbjct: 178 LEAISDLAANRGQTLMFSATFADRIIRLAERMMNEPERI-AIETGHSTNTDITQTLHWTD 236
Query: 612 --ELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLY 669
E ++L H L + L + +VF ST T +L L E +V ++ PQ
Sbjct: 237 GFEHKKKLLTHWLADETLD----QAVVFASTQEDTDMLAEELAEAGHSVVALHGAMPQTV 292
Query: 670 RDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEG 729
R+R R + ILV +DV+ARG+D P ++ V+ G+P E Y+HR+GRTGR G+ G
Sbjct: 293 RNRRLRSIREGRAKILVATDVAARGLDVPTISHVINFGLPMKHEDYVHRIGRTGRAGRTG 352
Query: 730 EGVLLLAPWEEYFLDDLKD 748
+ + L E + L+D
Sbjct: 353 QAITLATYRERGKIRALED 371
>gi|392967949|ref|ZP_10333365.1| DEAD/DEAH box helicase domain protein [Fibrisoma limi BUZ 3]
gi|387842311|emb|CCH55419.1| DEAD/DEAH box helicase domain protein [Fibrisoma limi BUZ 3]
Length = 663
Score = 209 bits (532), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 130/412 (31%), Positives = 224/412 (54%), Gaps = 22/412 (5%)
Query: 377 SQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLP 436
+QK F + IS ++A+T G++ + +Q + L G+D + +A+TGTGK+ AF +P
Sbjct: 48 NQKTFADLDISDDLLQAVTDMGFVSPSPIQAEAIPPILAGRDVIGQAQTGTGKTAAFGIP 107
Query: 437 AIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRF 496
A+E + + S + VL+LCPTRELA Q+A E L K G+ V + GG
Sbjct: 108 ALEMIDTSVRS--------VQVLVLCPTRELALQVADEIRKLAKYKRGLRVEAIYGGDSI 159
Query: 497 KVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVE 556
+ R L+ I++ TPGR++DH+E + ++L ++M++LDEAD +LD+GFR+D+E
Sbjct: 160 ERQIRSLKGG-VHIVIGTPGRVMDHMERNT---LKLDNVRMMILDEADEMLDMGFREDIE 215
Query: 557 NIVDCLPRRRQSLLFSATMPKELVLKREHTYIDTVGLGSVE---TPVKIKQSCLVAPHEL 613
+I++ +P RQ++LFSATM K ++ + D V + V+ T I+Q +
Sbjct: 216 SILEDMPEERQTILFSATMSKPIMAITQKFQKDPVLVKVVKKELTNQNIEQVYFEVKPKA 275
Query: 614 HFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRI 673
+++ L+ + L ++VFC+T + L+ ++ Q R+ +
Sbjct: 276 KVEVMCRLIDTYDLKL----LLVFCNTKRKVDEIVEDLQIRGYMAEGLHGDLRQAQRNNV 331
Query: 674 SEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVL 733
+FRA ILV +DV+ARG+D DV +V+ IP D E Y+HR+GRTGR GK G
Sbjct: 332 MSKFRAGTTNILVATDVAARGIDVDDVDAVINFDIPLDEEYYVHRIGRTGRAGKSGRAFS 391
Query: 734 LLAPWEEYFLDDLKD---LPLDKLQLPHLNPEIQLQMDNHMAKIDNNVKEAA 782
L+ E+Y +++ + ++K +P + ++ + ++ + E+A
Sbjct: 392 LVGRDEKYRFREIQTYTKVKVEKGVIPSFEDIVGIRKARFIEQLQQTINESA 443
>gi|126643119|ref|YP_001086103.1| ATP-dependent RNA helicase [Acinetobacter baumannii ATCC 17978]
gi|213158859|ref|YP_002320857.1| DEAD/DEAH box helicase [Acinetobacter baumannii AB0057]
gi|417546591|ref|ZP_12197677.1| DEAD/DEAH box helicase [Acinetobacter baumannii OIFC032]
gi|417550372|ref|ZP_12201451.1| DEAD/DEAH box helicase [Acinetobacter baumannii Naval-18]
gi|417553488|ref|ZP_12204557.1| DEAD/DEAH box helicase [Acinetobacter baumannii Naval-81]
gi|417563156|ref|ZP_12214035.1| DEAD/DEAH box helicase [Acinetobacter baumannii OIFC137]
gi|417563640|ref|ZP_12214514.1| DEAD/DEAH box helicase [Acinetobacter baumannii OIFC143]
gi|417572732|ref|ZP_12223586.1| DEAD/DEAH box helicase [Acinetobacter baumannii Canada BC-5]
gi|421199750|ref|ZP_15656911.1| DEAD/DEAH box helicase [Acinetobacter baumannii OIFC109]
gi|421455389|ref|ZP_15904733.1| DEAD/DEAH box helicase [Acinetobacter baumannii IS-123]
gi|421633323|ref|ZP_16073960.1| DEAD/DEAH box helicase [Acinetobacter baumannii Naval-13]
gi|421665758|ref|ZP_16105864.1| DEAD/DEAH box helicase [Acinetobacter baumannii OIFC087]
gi|421669129|ref|ZP_16109157.1| DEAD/DEAH box helicase [Acinetobacter baumannii OIFC099]
gi|421788966|ref|ZP_16225234.1| DEAD/DEAH box helicase [Acinetobacter baumannii Naval-82]
gi|421809430|ref|ZP_16245265.1| DEAD/DEAH box helicase [Acinetobacter baumannii OIFC035]
gi|445398086|ref|ZP_21429457.1| DEAD/DEAH box helicase [Acinetobacter baumannii Naval-57]
gi|445444213|ref|ZP_21442857.1| DEAD/DEAH box helicase [Acinetobacter baumannii WC-A-92]
gi|126389003|gb|ABO13501.1| putative ATP-dependent RNA helicase [Acinetobacter baumannii ATCC
17978]
gi|213058019|gb|ACJ42921.1| DEAD/DEAH box helicase [Acinetobacter baumannii AB0057]
gi|395525738|gb|EJG13827.1| DEAD/DEAH box helicase [Acinetobacter baumannii OIFC137]
gi|395555396|gb|EJG21397.1| DEAD/DEAH box helicase [Acinetobacter baumannii OIFC143]
gi|395564747|gb|EJG26398.1| DEAD/DEAH box helicase [Acinetobacter baumannii OIFC109]
gi|400208300|gb|EJO39270.1| DEAD/DEAH box helicase [Acinetobacter baumannii Canada BC-5]
gi|400211627|gb|EJO42589.1| DEAD/DEAH box helicase [Acinetobacter baumannii IS-123]
gi|400384479|gb|EJP43157.1| DEAD/DEAH box helicase [Acinetobacter baumannii OIFC032]
gi|400386197|gb|EJP49271.1| DEAD/DEAH box helicase [Acinetobacter baumannii Naval-18]
gi|400389905|gb|EJP56952.1| DEAD/DEAH box helicase [Acinetobacter baumannii Naval-81]
gi|408706783|gb|EKL52083.1| DEAD/DEAH box helicase [Acinetobacter baumannii Naval-13]
gi|410389256|gb|EKP41671.1| DEAD/DEAH box helicase [Acinetobacter baumannii OIFC099]
gi|410389492|gb|EKP41904.1| DEAD/DEAH box helicase [Acinetobacter baumannii OIFC087]
gi|410399852|gb|EKP52033.1| DEAD/DEAH box helicase [Acinetobacter baumannii Naval-82]
gi|410414327|gb|EKP66129.1| DEAD/DEAH box helicase [Acinetobacter baumannii OIFC035]
gi|444761858|gb|ELW86235.1| DEAD/DEAH box helicase [Acinetobacter baumannii WC-A-92]
gi|444783845|gb|ELX07682.1| DEAD/DEAH box helicase [Acinetobacter baumannii Naval-57]
gi|452946371|gb|EME51870.1| ATP-dependent RNA helicase [Acinetobacter baumannii MSP4-16]
Length = 615
Score = 209 bits (532), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 128/379 (33%), Positives = 202/379 (53%), Gaps = 19/379 (5%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
K F E + +AL G+ T VQE ++ A LEGKD +V ++TG+GK+ AFLLP +
Sbjct: 3 KTFAEFSLHETLQQALEGLGFTNPTPVQEQSIPAALEGKDLLVSSQTGSGKTAAFLLPTL 62
Query: 439 EAVLKATS----SSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGT 494
+ + + V +L+LCPTRELA Q++ +AIA +++ G+ + ++GG
Sbjct: 63 HNLAGQDTFVPFKERMKAVTQPSILVLCPTRELAQQVSQDAIAFVRHMKGVRIAAIMGGM 122
Query: 495 RFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKD 554
F ++L+ Q++VATPGRLLD + + ++L + L++DEAD +LDLGF +D
Sbjct: 123 PFGKQIQQLKG--AQVVVATPGRLLDLVNRRQ---LKLDKVDALIVDEADRMLDLGFSED 177
Query: 555 VENIVDCLPRRRQSLLFSATMPKELVLKREHTYIDTVGLGSVETPVKIKQSCLVAPH--- 611
+E I D R Q+L+FSAT ++ E + + ++ET H
Sbjct: 178 LEAISDLAANRGQTLMFSATFADRIIRLAERMMNEPERI-AIETGHSTNTDITQTLHWTD 236
Query: 612 --ELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLY 669
E ++L H L + L + +VF ST T +L L E +V ++ PQ
Sbjct: 237 GFEHKKKLLTHWLADETLD----QAVVFASTQEDTDMLAEELAEAGHSVVALHGAMPQTV 292
Query: 670 RDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEG 729
R+R R + ILV +DV+ARG+D P ++ V+ G+P E Y+HR+GRTGR G+ G
Sbjct: 293 RNRRLRSIREGRAKILVATDVAARGLDVPTISHVINFGLPMKHEDYVHRIGRTGRAGRTG 352
Query: 730 EGVLLLAPWEEYFLDDLKD 748
+ + L E + L+D
Sbjct: 353 QAITLATYRERGKIRALED 371
>gi|425748509|ref|ZP_18866496.1| DEAD/DEAH box helicase [Acinetobacter baumannii WC-348]
gi|425491390|gb|EKU57675.1| DEAD/DEAH box helicase [Acinetobacter baumannii WC-348]
Length = 586
Score = 209 bits (532), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 128/379 (33%), Positives = 202/379 (53%), Gaps = 19/379 (5%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
K F E + +AL G+ T VQE ++ A LEGKD +V ++TG+GK+ AFLLP +
Sbjct: 3 KTFAEFSLHETLQQALEGLGFTNPTPVQEQSIPAALEGKDLLVSSQTGSGKTAAFLLPTL 62
Query: 439 EAVLKATS----SSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGT 494
+ + + V +L+LCPTRELA Q++ +AIA +++ G+ + ++GG
Sbjct: 63 HNLAGQDTFVPFKERMKAVTQPSILVLCPTRELAQQVSQDAIAFVRHMKGVRIAAIMGGM 122
Query: 495 RFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKD 554
F ++L+ Q++VATPGRLLD + + ++L + L++DEAD +LDLGF +D
Sbjct: 123 PFGKQIQQLKG--AQVVVATPGRLLDLVNRRQ---LKLDKVDALIVDEADRMLDLGFSED 177
Query: 555 VENIVDCLPRRRQSLLFSATMPKELVLKREHTYIDTVGLGSVETPVKIKQSCLVAPH--- 611
+E I D R Q+L+FSAT ++ E + + ++ET H
Sbjct: 178 LEAISDLAANRGQTLMFSATFADRIICLAERMMNEPERI-AIETGHSTNTDITQTLHWTD 236
Query: 612 --ELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLY 669
E ++L H L + L + +VF ST T +L L E +V ++ PQ
Sbjct: 237 GFEHKKKLLTHWLADETLD----QAVVFASTQEDTDMLAEELAEAGHSVVALHGAMPQTV 292
Query: 670 RDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEG 729
R+R R + ILV +DV+ARG+D P ++ V+ G+P E Y+HR+GRTGR G+ G
Sbjct: 293 RNRRLRSIREGRAKILVATDVAARGLDVPTISHVINFGLPMKHEDYVHRIGRTGRAGRTG 352
Query: 730 EGVLLLAPWEEYFLDDLKD 748
+ + L E + L+D
Sbjct: 353 QAITLATYRERGKIRALED 371
>gi|163855229|ref|YP_001629527.1| ATP-dependent RNA helicase [Bordetella petrii DSM 12804]
gi|163258957|emb|CAP41256.1| putative ATP-dependent RNA helicase [Bordetella petrii]
Length = 476
Score = 209 bits (532), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 132/383 (34%), Positives = 200/383 (52%), Gaps = 34/383 (8%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F + G+ P ++++ GY T +Q L A + G+D + A+TGTGK+ AF LP +
Sbjct: 19 FADFGLHPQLLQSVADTGYTTPTPIQAQALPAVMAGRDVMGAAQTGTGKTAAFTLPILHR 78
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
++ ++S + P+ LIL PTRELA Q+ E++ H + + GG +
Sbjct: 79 LMPLANTSASPARHPVRTLILTPTRELADQVY-ESVKRYSKHTPLRSAVVFGGVDIGPQK 137
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
L C+ILVATPGRLLDH+E K+ V L + +LVLDEAD +LD+GF D++ IV
Sbjct: 138 EALRRG-CEILVATPGRLLDHVEQKT---VNLSQVGILVLDEADRMLDMGFLPDLDRIVR 193
Query: 561 CLPRRRQSLLFSATM--------------PKELVLKREHTYIDTVGLGSVETPVKIKQSC 606
LP +RQ LLFSAT P E+ + + DTV + + P K++
Sbjct: 194 LLPAQRQGLLFSATFSNEIRKLGRTYLNQPVEIEVAARNATADTVSQIAYQMPSDAKRAA 253
Query: 607 LVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKP 666
+V HL+K L +VIVF +T + T+ L L + ++ K
Sbjct: 254 VV-----------HLVKSRGL----KQVIVFSNTKIGTARLARELERDGVRAESIHGDKS 298
Query: 667 QLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREG 726
Q R + + F+A + +LV +DV+ARG+D V V+ +P + E Y+HR+GRTGR G
Sbjct: 299 QADRMKALDAFKAGELEVLVATDVAARGLDVAGVPCVINYDLPHNAEDYVHRIGRTGRAG 358
Query: 727 KEGEGVLLLAPWEEYFLDDLKDL 749
GE + L E +L D++ L
Sbjct: 359 ASGEAIALFTADETRYLQDIEKL 381
>gi|260903903|ref|ZP_05912225.1| DEAD/DEAH box helicase domain-containing protein [Brevibacterium
linens BL2]
Length = 606
Score = 209 bits (532), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 137/405 (33%), Positives = 214/405 (52%), Gaps = 23/405 (5%)
Query: 380 RFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIE 439
+F E G+ PL ++A+ A GY T +Q T+ A +EG+D + A+TGTGK+ AF LPA+
Sbjct: 14 KFSELGLHPLVLQAVQAQGYETPTPIQAETIPALVEGRDVIGLAQTGTGKTAAFALPALS 73
Query: 440 AVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVD 499
+ +A ++ + L+L PTRELA Q+A + N D VL + GG +
Sbjct: 74 DLAEAGRANDGP-----FALVLTPTRELAIQVAEAFTSYATNLDDFSVLPIYGGQAYGPQ 128
Query: 500 QRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIV 559
L+ Q++V TPGR++DH+ K G S++L L+ L+LDEAD +L +GF +D+E I
Sbjct: 129 LSGLKRG-AQVVVGTPGRVIDHL--KKG-SLKLGSLRHLILDEADEMLKMGFAEDIEEIF 184
Query: 560 DCLPRRRQSLLFSATMPKELVLKREHTYIDT---VGLGS-VETPVKIKQSCLVAPHELHF 615
RQ LFSATMP + + Y++ V + S +T I+Q + H
Sbjct: 185 SQSGDSRQVALFSATMPTS-IHRLTGKYLNNPKEVRVASKSQTGSNIRQRYHMVQHSHKL 243
Query: 616 QILHHLLKEHILGTPDYK-VIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRIS 674
L +L+ +Y+ +I+F T T L LR + PQ R+R
Sbjct: 244 DALTRILE-----VEEYEGIIMFVRTKQATEELAEKLRARGFKASAINGDIPQQARERTI 298
Query: 675 EEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLL 734
+ R K ILV +DV+ARG+D +T VV IP D E Y+HR+GRTGR G+ GE +L
Sbjct: 299 DMLRNGKVDILVATDVAARGLDVERITLVVNFDIPHDTESYVHRIGRTGRAGRSGEAILF 358
Query: 735 LAPWEEYFLDDLKDLP---LDKLQLPHLNPEIQLQMDNHMAKIDN 776
+ P E+ L ++ +++L++P + +++ +ID+
Sbjct: 359 VTPREQRLLGSIERATKQKVEQLKMPSVEELTNTRVEKFTKRIDD 403
>gi|331086825|ref|ZP_08335902.1| hypothetical protein HMPREF0987_02205 [Lachnospiraceae bacterium
9_1_43BFAA]
gi|330409991|gb|EGG89426.1| hypothetical protein HMPREF0987_02205 [Lachnospiraceae bacterium
9_1_43BFAA]
Length = 529
Score = 209 bits (532), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 134/396 (33%), Positives = 214/396 (54%), Gaps = 22/396 (5%)
Query: 380 RFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIE 439
RF+E GI P KA+ G+ + + +Q + + GKD + +A+TGTGK+ AF +P +E
Sbjct: 5 RFEELGICPEIQKAVKHMGFEEASPIQSKAIPVMMTGKDIIGQAQTGTGKTAAFGIPMLE 64
Query: 440 AVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVD 499
+ + ++LCPTRELA Q+A E L K GI VL + GG
Sbjct: 65 KIDPKNKK--------LQGIVLCPTRELAIQVAEEIRNLAKYMHGIKVLPIYGGQEIVKQ 116
Query: 500 QRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIV 559
R L+S Q+++ TPGR++DH+ K+ +++ + ++LDEAD +L++GFR+D+E I+
Sbjct: 117 IRSLKSG-TQLIIGTPGRVMDHMRRKT---IKMEQVHTVILDEADEMLNMGFREDIETIL 172
Query: 560 DCLPRRRQSLLFSATMPKEL--VLKREHTYIDTVGLGSVETPV-KIKQSCLVAPHELHFQ 616
+ +P RQ++LFSATMPK + + K+ + + + E V I+Q + +
Sbjct: 173 EGVPEERQTVLFSATMPKAIMEITKKFQKNAELIKVTKKELTVPNIEQFYYEVKPKNKEE 232
Query: 617 ILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEE 676
+L LL + TP VI FC+T LL L ++ Q RDR+ +
Sbjct: 233 VLTRLLDIY---TPKLSVI-FCNTKKQVDLLVTALLGRGYFAAGLHGDMKQAQRDRVMQG 288
Query: 677 FRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLA 736
FR+ K ILV +DV+ARG+D +V +V +P D E Y+HR+GRTGR G+ G ++
Sbjct: 289 FRSGKTDILVATDVAARGIDVDEVEAVFNYDLPQDEEYYVHRIGRTGRAGRVGRSFSFVS 348
Query: 737 PWEEYFLDDLKDLPLDKL---QLPHLNPEIQLQMDN 769
E Y L +++ K+ ++P LN ++DN
Sbjct: 349 GKEVYKLKEIQRYCKTKIYAQKVPSLNDVANTKIDN 384
>gi|195351764|ref|XP_002042399.1| GM13518 [Drosophila sechellia]
gi|194124242|gb|EDW46285.1| GM13518 [Drosophila sechellia]
Length = 825
Score = 209 bits (532), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 157/504 (31%), Positives = 255/504 (50%), Gaps = 50/504 (9%)
Query: 352 RKEISKNKLNGN----GEKKEKREEEPILSQKRFDECGISPLTIKALTAAGYIQMTRVQE 407
R+EI+K++L E K K E + K+F + +S T KAL + ++ T+VQ
Sbjct: 41 RQEINKSRLAATEAEIQELKTKYAEIDATAIKKFAQFPLSKKTQKALAESKFVHPTQVQR 100
Query: 408 ATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLVPPIYVLILCPTREL 467
++ L+GKD + A TG+GK++AFL+P +E + S T + +I+ PTREL
Sbjct: 101 DSIGPALQGKDVLGAAITGSGKTLAFLIPVLEHLFMNKWSRTDG----VGAIIISPTREL 156
Query: 468 ASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSG 527
A QI + K+HD L ++GG K ++ R+ D C IL+ TPGRLL H++
Sbjct: 157 AYQIFETLKKVGKHHDFSAGL-IIGGKNLKFERTRM--DQCNILICTPGRLLQHMDENPL 213
Query: 528 LSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQSLLFSATMPKELVLKREHTY 587
+ M +MLVLDEAD LD+GF+K + +I++ P RQ+LLFSAT +
Sbjct: 214 FNTSTM--EMLVLDEADRCLDMGFQKTLNSIIENFPPARQTLLFSATQTNTVQDLARLNL 271
Query: 588 IDTVGLGS---------------------VETPVKIKQSCLVAPHELHFQILHHLLKEHI 626
D V +G + P ++QS +V E +L +K H+
Sbjct: 272 KDPVYVGYGGATPGEEPNASTKKAPNTAVLAVPELLQQSYVVLNLEDKITMLWSFIKNHL 331
Query: 627 LGTPDYKVIVFCSTGMVTSLLYLLLREMKMN--VREMYSRKPQLYRDRISEEFRASKRLI 684
K+IVF S+ LY + +++ + +Y Q R I E+F ++
Sbjct: 332 ----KQKIIVFVSSCKQAKYLYEIFCKLRPGSPLLALYGTLHQDRRIAIYEDFLRKSHVV 387
Query: 685 LVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLAPW-EEYFL 743
+ ++DV++RG+D+P V VVQ+ P D QYIHR GR+ R GE +L+L P EEY +
Sbjct: 388 MFSTDVASRGLDFPAVNWVVQLDCPEDVSQYIHRAGRSARNKTRGECLLVLTPSEEEYMI 447
Query: 744 DDLKDLPLDKLQLPHLNPE----IQLQMDNHMAKIDNNVKEAAYHAWLGYYNSIREIGRD 799
LK+ ++ ++P+ +++++ +A+ ++ A A+L Y S+ + R+
Sbjct: 448 SALKEQLNIDIRCVQIDPKKLFSPRVKIEAFLAQFP-ELRATAQRAFLSYIKSVF-LMRN 505
Query: 800 KTTLVELA---NKFAQSIGLQRPP 820
K + + FAQS+GL P
Sbjct: 506 KRLFNVFSLDLDAFAQSLGLAVTP 529
>gi|332252169|ref|XP_003275228.1| PREDICTED: ATP-dependent RNA helicase DDX18 [Nomascus leucogenys]
Length = 671
Score = 209 bits (531), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 153/451 (33%), Positives = 245/451 (54%), Gaps = 41/451 (9%)
Query: 390 TIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSST 449
T+KA+ G+ MT +Q ++ LEG+D + AKTG+GK++AFL+PA+E ++K
Sbjct: 191 TLKAIKEMGFTNMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPAVELIVKL----- 245
Query: 450 TQLVP--PIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDP 507
+ +P VLIL PTRELA Q L+ +H L ++GG+ + ++L ++
Sbjct: 246 -RFMPRNGTGVLILSPTRELAMQTFGVLKELMTHHVHTYGL-IMGGSNRSAEAQKL-ANG 302
Query: 508 CQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQ 567
I+VATPGRLLDH++N G + L+ LV+DEAD +LD+GF ++++ I+ LP RRQ
Sbjct: 303 INIIVATPGRLLDHMQNTPGFMYK--NLQCLVIDEADRILDVGFEEELKQIIKLLPTRRQ 360
Query: 568 SLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILHHL 621
++LFSAT ++ + LK+E Y+ + T ++Q +V P E F +L
Sbjct: 361 TMLFSATQTRKVEDLARISLKKEPLYVGVDDDKANATVDGLEQGYVVCPSEKRFLLLFTF 420
Query: 622 LKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEFRASK 681
LK++ K++VF S+ M Y LL + + V ++ ++ Q R +F +
Sbjct: 421 LKKN----RKKKLMVFFSSCMSVKYHYELLNYIDLPVLAIHGKQKQNKRTTTFFQFCNAD 476
Query: 682 RLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEG--VLLLAPWE 739
L+ +DV+ARG+D P+V +VQ P D ++YIHR+GRT R G G G +L+L P E
Sbjct: 477 SGTLLCTDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTAR-GLNGRGHALLILRPEE 535
Query: 740 EYFLDDLKD--LPLDKLQLPHLN-PEIQLQMDNHMAKIDNNVKEAAYHAWLGYYNSIREI 796
FL LK +PL + +IQ Q++ + K + + ++A A+ Y IR
Sbjct: 536 LGFLRYLKQSKVPLSEFDFSWSKISDIQSQLEKLIEK-NYFLHKSAQEAYKSY---IR-- 589
Query: 797 GRDKTTLVELAN-------KFAQSIGLQRPP 820
D +L ++ N + A S G + PP
Sbjct: 590 AYDSHSLKQIFNVNNLNLPQVALSFGFKVPP 620
>gi|367053355|ref|XP_003657056.1| hypothetical protein THITE_2122420 [Thielavia terrestris NRRL 8126]
gi|347004321|gb|AEO70720.1| hypothetical protein THITE_2122420 [Thielavia terrestris NRRL 8126]
Length = 827
Score = 209 bits (531), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 154/462 (33%), Positives = 244/462 (52%), Gaps = 33/462 (7%)
Query: 380 RFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIE 439
+F + + T L A+ + +T VQ A + L+G+D + AKTG+GK++AFL+P +E
Sbjct: 54 KFSDLPLCEATSAGLRASHFEVLTDVQRAAIPLALKGRDVLGAAKTGSGKTLAFLVPVLE 113
Query: 440 AVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVD 499
+ A + L LI+ PTRELA QI + +NH L ++GG K +
Sbjct: 114 KLFHAQWTEYDGL----GALIISPTRELAVQIFEVLRKIGRNHYFSAGL-VIGGKSLKEE 168
Query: 500 QRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIV 559
RL ILV TPGR+L H++ +G V L++LVLDEAD ++D+GF+ V+ +V
Sbjct: 169 AERLGR--MNILVCTPGRMLQHLDQTAGFDVN--NLQILVLDEADRIMDMGFQSAVDALV 224
Query: 560 DCLPRRRQSLLFSATMPKEL-----VLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELH 614
+ LP+ RQ+LLFSAT K + + ++ Y+ TP ++QS +V P
Sbjct: 225 EHLPKTRQTLLFSATQSKRVSDLARLSLKDPEYVSVHEAAPTATPAALQQSYIVTPLAEK 284
Query: 615 FQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK--MNVREMYSRKPQLYRDR 672
L L+ ++ K+IVF S+G +Y + M+ + + ++ R+ Q+ R
Sbjct: 285 LDTLWGFLRANL----KSKIIVFLSSGKQVRFVYESFKRMQPGIPLLHLHGRQKQVARME 340
Query: 673 ISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGV 732
I+ F ++K L +DV ARG+D+P V V+QV P D + YIHR+GRT R +G V
Sbjct: 341 ITSRFASAKYSCLFATDVVARGVDFPAVDWVIQVDCPEDADTYIHRVGRTARYESKGRAV 400
Query: 733 LLLAPWEEYFLDDL--KDLPLDKLQLPHLNPEIQLQMDNHMAKI---DNNVKEAAYHAWL 787
L L P EE FL L K +P+ K+ ++ + + + N + + +VK A++
Sbjct: 401 LFLEPSEEGFLKRLEHKKVPIQKV---NVREKKKKSIKNELQSLCFQSADVKYLGQKAFI 457
Query: 788 GYYNSIREIGRDKTTLV--EL-ANKFAQSIGLQRPPPL-FRK 825
Y SI + +DK EL + FA+S+GL P + F+K
Sbjct: 458 SYTRSIY-LQKDKEVFKFDELDFDGFAESLGLPGTPQIKFQK 498
>gi|366989987|ref|XP_003674761.1| hypothetical protein NCAS_0B03030 [Naumovozyma castellii CBS 4309]
gi|342300625|emb|CCC68387.1| hypothetical protein NCAS_0B03030 [Naumovozyma castellii CBS 4309]
Length = 684
Score = 209 bits (531), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 133/391 (34%), Positives = 214/391 (54%), Gaps = 32/391 (8%)
Query: 382 DECGISPLTIKALTAAGYIQMTRVQEATLSACLE---GKDAVVKAKTGTGKSIAFLLPAI 438
+E I + K+++ + +T VQ+ T+ L D + +AKTGTGK+ AFL+P
Sbjct: 122 EEGIIDTMLHKSISRMNFPGLTPVQQRTIKPILTTSTSDDVIARAKTGTGKTFAFLIPMF 181
Query: 439 EAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGI---GVLTLVGGTR 495
+ ++ S + +I+ PTR+LA QI AE + N+ G+ G ++LVGGT
Sbjct: 182 QHLINTKLDSQNM----VKCVIVAPTRDLALQIEAEVKKIHDNNYGLKKFGCVSLVGGTN 237
Query: 496 FKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDV 555
F + R+++ I++ TPGRL+D ++ S + + K +LDEAD LL++GF++D+
Sbjct: 238 FGMAMRKMDQLRPNIIIGTPGRLIDVMDKYSDKFFKYVDFK--ILDEADRLLEIGFKEDL 295
Query: 556 ENIVDCLPR-------RRQSLLFSATMPKEL------VLKREHT-YIDTVGLGSVETPVK 601
E I L R ++LLFSAT+ +++ ++ +E ++DTV E K
Sbjct: 296 EYISSTLNRINAVGKDHIRTLLFSATLDEKVQVLANNIMNKEQCLFLDTVDKNEPEAHEK 355
Query: 602 IKQSCLVAPHELH--FQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLRE---MKM 656
I Q+ ++ H H + + HL + I P+YK IVF T T LL++ ++
Sbjct: 356 IDQAVVLTDHFAHNIYAAIEHL-RLKIKEDPEYKTIVFTPTVKFTKFFSQLLKKEFGSQL 414
Query: 657 NVREMYSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYI 716
+ E + + Q R RI +F+ K +LV +DV ARGMD+P+V V+QVG+P + YI
Sbjct: 415 PIYEFHGQIEQRRRTRIVGDFKRVKAGLLVCTDVGARGMDFPNVKEVIQVGVPSELANYI 474
Query: 717 HRLGRTGREGKEGEGVLLLAPWEEYFLDDLK 747
HR+GRT R GKEG L + +E F++ LK
Sbjct: 475 HRIGRTARSGKEGSSTLFICKYELPFIERLK 505
>gi|224054552|ref|XP_002298317.1| predicted protein [Populus trichocarpa]
gi|222845575|gb|EEE83122.1| predicted protein [Populus trichocarpa]
Length = 574
Score = 209 bits (531), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 143/435 (32%), Positives = 229/435 (52%), Gaps = 34/435 (7%)
Query: 375 ILSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFL 434
I+S + FD G+S T K + G+ +T++Q + L GKD + A+TG+GK++AFL
Sbjct: 84 IMSTESFDSLGLSEATRKTIQEMGFENLTQIQARAIPPLLVGKDVLGAARTGSGKTLAFL 143
Query: 435 LPAIEAVLKATSSSTTQLVP--PIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVG 492
+PA+E + P V+++CPTRELA Q A A LLK H L + G
Sbjct: 144 IPAVELL------HNVHFAPRNGTGVVVICPTRELAIQTHAVAKDLLKYHSQTLGLVIGG 197
Query: 493 GTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFR 552
R +R ++ +LVATPGRLLDH++N G + LK L +DEAD +L+ F
Sbjct: 198 AARRGEAERLVKG--VNLLVATPGRLLDHLQNTKGFIYK--NLKCLTIDEADRILEANFE 253
Query: 553 KDVENIVDCLPRRRQSLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSC 606
++++ I+ LP+ RQ+ LFSAT K+ L + YID + T ++Q
Sbjct: 254 EEMKQIIKLLPKARQTALFSATQTKKVEDLARLSFQTTPVYIDVDDGRTKVTNEGLQQGY 313
Query: 607 LVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKP 666
V P F +L+ K ++ KV+VF S+ LLR +++ +++ ++
Sbjct: 314 CVVPSAKRFVLLYSFFKRNL----SKKVMVFFSSCNSVKFHADLLRYIQVECFDIHGKQK 369
Query: 667 QLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGR-E 725
Q R +F +++ IL+ +DV+ARG+D P V +VQ P + ++YIHR+GRT R E
Sbjct: 370 QQKRTSTFFDFCKAEKGILLCTDVAARGLDIPAVDWIVQFDPPDEPKEYIHRVGRTARGE 429
Query: 726 GKEGEGVLLLAPWEEYFLDDL-------KDLPLDKLQLPHLNPEIQ-LQMDNHMAKIDNN 777
G +G +L L P E FL L K+ D+ +L ++ +++ L +N+ N
Sbjct: 430 GAKGNALLFLIPEELQFLRYLKAAKVPVKEYEFDQKKLANVQSQLEKLVANNYYL---NK 486
Query: 778 VKEAAYHAWLGYYNS 792
+ AY +++ YNS
Sbjct: 487 SAKDAYRSYMLAYNS 501
>gi|432930301|ref|XP_004081420.1| PREDICTED: ATP-dependent RNA helicase DDX18-like [Oryzias latipes]
Length = 643
Score = 209 bits (531), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 152/452 (33%), Positives = 246/452 (54%), Gaps = 35/452 (7%)
Query: 386 ISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKAT 445
+S T+K + G+ MT +Q T+ LEG+D + AKTG+GK++AFL+P+IE + K
Sbjct: 158 VSEGTLKGVKEMGFQHMTEIQHKTVRPLLEGRDVLAAAKTGSGKTLAFLIPSIELIYK-- 215
Query: 446 SSSTTQLVP--PIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRL 503
+ +P V+IL PTRELA Q L+ +H L ++GG+ + +RL
Sbjct: 216 ----LKFMPRNGTGVIILSPTRELAMQTYGVLKELMTHHVHTYGL-IMGGSNRSAEAQRL 270
Query: 504 ESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLP 563
++ ILVATPGRLLDH++ G + L+ L++DEAD +L++GF ++++ I+ LP
Sbjct: 271 -ANGVNILVATPGRLLDHLQXTPGFMFK--NLQCLIIDEADRILEVGFEEELKQIIKLLP 327
Query: 564 RRRQSLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQI 617
+RRQ++LFSAT + + LK+E Y+ T ++Q +V P E F +
Sbjct: 328 KRRQTMLFSATQTRRVEDLARISLKKEPLYVGVDDNKDNATVDGLEQGYVVCPSEKRFLL 387
Query: 618 LHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEF 677
L LK++ K++VF S+ M Y LL + + V ++ ++ Q R +F
Sbjct: 388 LFTFLKKN----RKKKLMVFFSSCMSVKFHYELLNYIDLPVMAIHGKQKQTKRTTTFFQF 443
Query: 678 RASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEG--VLLL 735
+ IL+ +DV+ARG+D P+V ++Q P D ++YIHR+GRT R G +G G +L+L
Sbjct: 444 CNADSGILLCTDVAARGLDIPEVDWIIQYDPPDDPKEYIHRVGRTAR-GIDGRGHALLIL 502
Query: 736 APWEEYFLDDLKD--LPLDKLQLPHLN-PEIQLQMDNHMAKIDNNVKEA--AYHAWLGYY 790
P E FL LK +PL + + +IQ Q++ + K K A AY +++ Y
Sbjct: 503 RPEELGFLRFLKQAKVPLSEFEFSWSKISDIQSQLEKLIEKNYYLHKSAQEAYKSYVRAY 562
Query: 791 N--SIREIGRDKTTLVELANKFAQSIGLQRPP 820
+ S+++I T + + A S G + PP
Sbjct: 563 DSHSLKQIYSVNTLNLPMV---ALSFGFKVPP 591
>gi|196230475|ref|ZP_03129337.1| DEAD/DEAH box helicase domain protein [Chthoniobacter flavus
Ellin428]
gi|196225405|gb|EDY19913.1| DEAD/DEAH box helicase domain protein [Chthoniobacter flavus
Ellin428]
Length = 591
Score = 209 bits (531), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 134/371 (36%), Positives = 196/371 (52%), Gaps = 27/371 (7%)
Query: 376 LSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLL 435
+ +K F E G+SP +KA+ G+ + + +Q T+ L G D V ++TG+GK+ AF +
Sbjct: 1 MQKKPFTELGLSPELLKAVAKMGFEEASPIQSETIPQLLTGADVVGLSQTGSGKTAAFAI 60
Query: 436 PAIEAV---LKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVG 492
PAIE V L+A VLILCPTRELA Q+A E L G+ L + G
Sbjct: 61 PAIERVDGNLRAPQ-----------VLILCPTRELAMQVAEEVAKLAFFKRGVRELPIYG 109
Query: 493 GTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFR 552
G + R L D QI++ TPGR++DH+E K+ +RL + M++LDEAD +LD+GFR
Sbjct: 110 GQSYDRQLRGLR-DGAQIIIGTPGRVMDHLERKT---LRLDQVGMIILDEADRMLDMGFR 165
Query: 553 KDVENIVDCLPRRRQSLLFSATMP---KELVLKREHTYIDTVGLGSVETPVKIKQSCLVA 609
D+E I+ P RQ++ FSATMP +LV K ++ T I QS
Sbjct: 166 DDIETILGQAPAERQTVFFSATMPPAINQLVKKYTKEPVNVRIQAQEMTVPAIDQSYYEV 225
Query: 610 PHELHFQILHHLLKEHILGTPDYKV-IVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQL 668
++L L+ D K I+FC+T M+ L L+ + +++ Q
Sbjct: 226 DRRSKLEVLCRLIDLQ-----DIKYGIIFCATKMMVDELSDHLKARGYSSDKLHGDISQS 280
Query: 669 YRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKE 728
R+R+ +FR LV +DV+ARG+D D+ V +P D E Y+HR+GRTGR G+
Sbjct: 281 MRERVVAKFRKRGFEFLVATDVAARGLDVDDIEVVFNYDLPQDAEDYVHRIGRTGRAGRS 340
Query: 729 GEGVLLLAPWE 739
G V +A E
Sbjct: 341 GRAVTFVAGRE 351
>gi|87124726|ref|ZP_01080574.1| putative ATP-dependent RNA helicase [Synechococcus sp. RS9917]
gi|86167605|gb|EAQ68864.1| putative ATP-dependent RNA helicase [Synechococcus sp. RS9917]
Length = 603
Score = 209 bits (531), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 140/402 (34%), Positives = 212/402 (52%), Gaps = 26/402 (6%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
FD G S ++ L + GY + +Q A + G+D V +A+TGTGK+ AF LP +E
Sbjct: 45 FDGFGFSEALLRTLASKGYQAPSPIQRAAFPELMLGRDLVGQAQTGTGKTAAFALPLLER 104
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+ P VL+L PTRELA Q+A A H + VL + GG+ F+
Sbjct: 105 LQPEG--------PGPQVLVLAPTRELAMQVAESFKAYAAGHPHLNVLAIYGGSDFRSQI 156
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
L+ ++V TPGR++DH+ + + L+ LVLDEAD +L +GF DVE I+D
Sbjct: 157 HSLKRG-VDVVVGTPGRVMDHMRQGT---LNTSHLRSLVLDEADEMLRMGFIDDVEWILD 212
Query: 561 CLPRRRQSLLFSATMPKELVLKREHTYIDTVGLGSVETPVK----IKQSCLVAPHELHFQ 616
LP RQ +LFSATMP E + + Y+ +++T K I+Q C+ + +
Sbjct: 213 QLPEERQVVLFSATMPAE-IRRLSKRYLREPAEITIKTQEKEARRIRQRCITLQNSHKLE 271
Query: 617 ILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEE 676
L+ +L E + G VI+F T +T + L +V + PQ R+R E
Sbjct: 272 ALNRVL-EAVTGE---GVIIFARTKAITLTVSENLEATGHDVAVLNGDVPQNQRERTVER 327
Query: 677 FRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLA 736
R ILV +DV+ARG+D + V+ +P D E Y+HR+GRTGR G+ GE +L +
Sbjct: 328 LRKGTVNILVATDVAARGLDVERIGLVINYDMPFDSEAYVHRIGRTGRAGRSGEAILFVT 387
Query: 737 PWEEYFLDDLKDL---PLDKLQLPHLNPEI-QLQMDNHMAKI 774
P E F+++L+ P++ +Q+P N EI Q ++DN K+
Sbjct: 388 PRERRFVNNLERATGQPIEPMQIPS-NAEINQARLDNLRQKL 428
>gi|291391442|ref|XP_002712440.1| PREDICTED: DEAD (Asp-Glu-Ala-Asp) box polypeptide 18 [Oryctolagus
cuniculus]
Length = 665
Score = 209 bits (531), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 145/418 (34%), Positives = 233/418 (55%), Gaps = 30/418 (7%)
Query: 390 TIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSST 449
T+KA+ G+ MT +Q ++ LEG+D + AKTG+GK++AFL+PA+E ++K
Sbjct: 185 TLKAIKEMGFTNMTEIQHKSVRPLLEGRDLLAAAKTGSGKTLAFLIPAVELIVK------ 238
Query: 450 TQLVP--PIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDP 507
+ +P VLIL PTRELA Q L+ +H L ++GG+ + ++L ++
Sbjct: 239 LKFMPRNGTGVLILSPTRELAMQTFGVLKELMTHHVHTYGL-IMGGSNRSAEAQKL-ANG 296
Query: 508 CQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQ 567
I+VATPGRLLDH++N G + L+ LV+DEAD +LD+GF ++++ I+ LP RRQ
Sbjct: 297 INIIVATPGRLLDHMQNTPGFMYK--NLQCLVIDEADRILDVGFEEELKQIIKLLPTRRQ 354
Query: 568 SLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILHHL 621
++LFSAT ++ + LK+E Y+ + T ++Q +V P E F +L
Sbjct: 355 TMLFSATQTRKVEDLARISLKKEPLYVGVDDDKANATVDGLEQGYVVCPSEKRFLLLFTF 414
Query: 622 LKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEFRASK 681
LK++ K++VF S+ M Y LL + + V ++ ++ Q R +F +
Sbjct: 415 LKKN----RKKKLMVFFSSCMSVKYHYELLNYIDLPVLAIHGKQKQNKRTTTFFQFCNAD 470
Query: 682 RLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEG--VLLLAPWE 739
IL+ +DV+ARG+D P+V +VQ P D ++YIHR+GRT R G G G +L+L P E
Sbjct: 471 SGILLCTDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTAR-GLNGRGHALLILRPEE 529
Query: 740 EYFLDDLKD--LPLDKLQLPHLN-PEIQLQMDNHMAK--IDNNVKEAAYHAWLGYYNS 792
FL LK +PL + +IQ Q++ + K + + AY +++ Y+S
Sbjct: 530 LGFLRYLKQSKVPLSEFDFSWSKISDIQSQLEKLIEKNYFLHKSAQEAYKSYIRAYDS 587
>gi|424062002|ref|ZP_17799489.1| hypothetical protein W9M_02203 [Acinetobacter baumannii Ab44444]
gi|404674414|gb|EKB42162.1| hypothetical protein W9M_02203 [Acinetobacter baumannii Ab44444]
Length = 586
Score = 209 bits (531), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 128/379 (33%), Positives = 202/379 (53%), Gaps = 19/379 (5%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
K F E + +AL G+ T VQE ++ A LEGKD +V ++TG+GK+ AFLLP +
Sbjct: 3 KTFAEFSLHETLQQALEGLGFTNPTPVQEQSIPAALEGKDLLVSSQTGSGKTAAFLLPTL 62
Query: 439 EAVLKATS----SSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGT 494
+ + + V +L+LCPTRELA Q++ +AIA +++ G+ + ++GG
Sbjct: 63 HNLAGQDTFVPFKERMKAVTQPSILVLCPTRELAQQVSQDAIAFVRHMKGVRIAAIMGGM 122
Query: 495 RFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKD 554
F ++L+ Q++VATPGRLLD + + ++L + L++DEAD +LDLGF +D
Sbjct: 123 PFGKQIQQLKG--AQVVVATPGRLLDLVNRRQ---LKLDKVDALIVDEADRMLDLGFSED 177
Query: 555 VENIVDCLPRRRQSLLFSATMPKELVLKREHTYIDTVGLGSVETPVKIKQSCLVAPH--- 611
+E I D R Q+L+FSAT ++ E + + ++ET H
Sbjct: 178 LEAISDLAANRGQTLMFSATFADRIIRLAERMMNEPERI-AIETGHSTNTDITQTLHWTD 236
Query: 612 --ELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLY 669
E ++L H L + L + +VF ST T +L L E +V ++ PQ
Sbjct: 237 GFEHKKKLLTHWLADETLD----QAVVFASTQEDTDMLAEELAEAGHSVVALHGAMPQTV 292
Query: 670 RDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEG 729
R+R R + ILV +DV+ARG+D P ++ V+ G+P E Y+HR+GRTGR G+ G
Sbjct: 293 RNRRLRSIREGRAKILVATDVAARGLDVPTISHVINFGLPMKHEDYVHRIGRTGRAGRTG 352
Query: 730 EGVLLLAPWEEYFLDDLKD 748
+ + L E + L+D
Sbjct: 353 QAITLATYRERGKIRALED 371
>gi|165934071|gb|ABY74563.1| DEAD box polypeptide 18 (predicted) [Callithrix jacchus]
Length = 623
Score = 209 bits (531), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 153/451 (33%), Positives = 245/451 (54%), Gaps = 41/451 (9%)
Query: 390 TIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSST 449
T+KA+ G+ MT +Q ++ LEG+D + AKTG+GK++AFL+PA+E ++K
Sbjct: 143 TLKAIKEMGFTNMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPAVELIVK------ 196
Query: 450 TQLVP--PIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDP 507
+ +P VLIL PTRELA Q L+ +H L ++GG+ + ++L ++
Sbjct: 197 LKFMPRNGTGVLILSPTRELAMQTFGVLKELMTHHVHTYGL-IMGGSNRSAEAQKL-ANG 254
Query: 508 CQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQ 567
I+VATPGRLLDH++N G + L+ LV+DEAD +LD+GF ++++ I+ LP RRQ
Sbjct: 255 INIIVATPGRLLDHMQNTPGFMYK--NLQCLVIDEADRILDVGFEEELKQIIKLLPTRRQ 312
Query: 568 SLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILHHL 621
++LFSAT ++ + LK+E Y+ + T ++Q +V P E F +L
Sbjct: 313 TMLFSATQTRKVEDLARISLKKEPLYVGVDDDKANATVDGLEQGYVVCPSEKRFLLLFTF 372
Query: 622 LKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEFRASK 681
LK++ K++VF S+ M Y LL + + V ++ ++ Q R +F +
Sbjct: 373 LKKN----RKKKLMVFFSSCMSVKYHYELLNYIDLPVLAIHGKQKQNKRTTTFFQFCNAD 428
Query: 682 RLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEG--VLLLAPWE 739
L+ +DV+ARG+D P+V +VQ P D ++YIHR+GRT R G G G +L+L P E
Sbjct: 429 SGTLLCTDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTAR-GLNGRGHALLILRPEE 487
Query: 740 EYFLDDLKD--LPLDKLQLPHLN-PEIQLQMDNHMAKIDNNVKEAAYHAWLGYYNSIREI 796
FL LK +PL + +IQ Q++ + K + + ++A A+ Y IR
Sbjct: 488 LGFLRYLKQSKVPLSEFDFSWSKISDIQSQLEKLIEK-NYFLHKSAQEAYKSY---IR-- 541
Query: 797 GRDKTTLVELAN-------KFAQSIGLQRPP 820
D +L ++ N + A S G + PP
Sbjct: 542 AYDSHSLKQIFNVNNLNLPQVALSFGFKVPP 572
>gi|212541586|ref|XP_002150948.1| ATP-dependent RNA helicase, putative [Talaromyces marneffei ATCC
18224]
gi|210068247|gb|EEA22339.1| ATP-dependent RNA helicase, putative [Talaromyces marneffei ATCC
18224]
Length = 584
Score = 209 bits (531), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 155/459 (33%), Positives = 240/459 (52%), Gaps = 36/459 (7%)
Query: 380 RFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIE 439
+F E +S T++A+ G+ MT +Q+ + + G+D + AKTG+GK++AFL+PAIE
Sbjct: 106 KFTELNLSERTLEAIKEMGFETMTEIQQRAIPPLMAGRDVLGAAKTGSGKTLAFLIPAIE 165
Query: 440 AV--LKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFK 497
+ LK + T VLIL PTRELA QI A LL H + + G R +
Sbjct: 166 LLHSLKFKPRNGTG------VLILSPTRELALQIWGVARQLLDKHSQTHGIVMGGANR-R 218
Query: 498 VDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVEN 557
+ +LE +LVATPGRLLDH++N G + L+ LV+DEAD +L++GF +++
Sbjct: 219 AEAEKLEKG-VNLLVATPGRLLDHLQNTKGFVFK--NLRQLVIDEADRILEIGFEDEMKQ 275
Query: 558 IVDCLPR-RRQSLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSCLVAP 610
I+ L RQ+ LFSAT + + LK YI+ V T +++Q +V
Sbjct: 276 IMKILGNGERQTSLFSATQTTKVEDLARISLKPGPLYINVVPRMENATVDRLEQGYVVCE 335
Query: 611 HELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYR 670
+ F +L LK ++ K+IVF S+ + LL + + V ++ ++ Q R
Sbjct: 336 PDKRFLLLFSFLKRNL----KKKIIVFLSSCNSVNYYSELLNYIDLPVLSIHGKQKQQKR 391
Query: 671 DRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGK-EG 729
EF S+R IL+ +DV+ARG+D P++ VVQ P D YIHR+GRT R K +G
Sbjct: 392 TSTFFEFVNSERGILICTDVAARGLDIPEIDYVVQYDPPDDPRDYIHRVGRTARGAKAKG 451
Query: 730 EGVLLLAPWEEYFLDDLKD--LPLDKLQLPH---LNPEIQLQMDNHMAKIDNNVKEAAYH 784
++ L P E FL LK+ +P+ + + P +N + QL+ N + Y
Sbjct: 452 RSLMFLQPSEMGFLTHLKEAKVPVVEFEFPQKKIINVQSQLEKLISQNYYLNKSAKEGYR 511
Query: 785 AWLGYY--NSIREI-GRDKTTLVELANKFAQSIGLQRPP 820
+++ Y +S+R + +K LV K A+S G PP
Sbjct: 512 SYINAYASHSLRSVFDVNKLDLV----KIAKSFGFSTPP 546
>gi|397779795|ref|YP_006544268.1| ATP-dependent RNA helicase DeaD [Methanoculleus bourgensis MS2]
gi|396938297|emb|CCJ35552.1| ATP-dependent RNA helicase DeaD [Methanoculleus bourgensis MS2]
Length = 521
Score = 209 bits (531), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 138/371 (37%), Positives = 204/371 (54%), Gaps = 19/371 (5%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F + IS T++A+ G+ + T +Q +T+ LEG+D +A+TGTGK+ AF +PAIE
Sbjct: 7 FQDFNISQKTLQAIQDMGFEEPTPIQVSTIPVILEGRDVTGQAQTGTGKTAAFGVPAIEQ 66
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
V + TQ VL+L PTRELA Q A E L K+H G+ +L + GG +
Sbjct: 67 V--DVGNRETQ------VLVLSPTRELAIQTAEEFARLAKHHRGLNILPIYGGQPIERQF 118
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
R L Q++V TPGR+LDH++ + + +KM+VLDEAD +LD+GFR+D+E I+D
Sbjct: 119 RGLRRG-AQVVVGTPGRVLDHLDRGT---LSFAAVKMVVLDEADQMLDMGFREDIEKILD 174
Query: 561 CLPRRRQSLLFSATMPKEL--VLKREHTYIDTVGLGSVETPV-KIKQSCLVAPHELHFQI 617
P RQ++LFSAT+P + + KR + + + E V +I+Q L +I
Sbjct: 175 ETPGDRQTILFSATLPGPILEISKRFQKNPEVISVARREVTVPQIEQLYLEVRSRNKLEI 234
Query: 618 LHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEF 677
L LL + P+ +VF +T L L+ ++ Q RDR+ +F
Sbjct: 235 LCRLLDMY---DPELS-LVFSNTKRGVDDLTAHLQARGYFAEGLHGDMKQSQRDRVMAKF 290
Query: 678 RASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLAP 737
RA ILV +DV+ARG+D DV V+ +P D E YIHR+GRT R G+ G + + P
Sbjct: 291 RAGTIDILVATDVAARGIDVEDVDLVINYEVPQDIEYYIHRIGRTARAGRTGRAITFVGP 350
Query: 738 WEEYFLDDLKD 748
E Y L ++D
Sbjct: 351 REYYKLRTIQD 361
>gi|410076008|ref|XP_003955586.1| hypothetical protein KAFR_0B01520 [Kazachstania africana CBS 2517]
gi|372462169|emb|CCF56451.1| hypothetical protein KAFR_0B01520 [Kazachstania africana CBS 2517]
Length = 496
Score = 209 bits (531), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 155/458 (33%), Positives = 242/458 (52%), Gaps = 36/458 (7%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F E +S T+KA+ G+ +MT VQ T+ + G+D + AKTG+GK++AFLLPAIE
Sbjct: 36 FKELNLSQPTLKAIDKMGFTKMTPVQARTIPPLMAGRDVLGAAKTGSGKTLAFLLPAIEM 95
Query: 441 V--LKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
+ LK + T V+++ PTRELA QI L++ H + + G R +
Sbjct: 96 LHSLKFKPRNGTG------VIVITPTRELALQIFGVVRELMEFHSQTFGIVIGGANRRQE 149
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
++ ++ IL+ATPGRLLDH++N G + LK LV+DEAD +L++GF ++ I
Sbjct: 150 AEKLMKG--VNILIATPGRLLDHLQNTKGFVFK--NLKALVIDEADRILEIGFEDEMRQI 205
Query: 559 VDCLPRR-RQSLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSCLVAPH 611
+ LP RQS+LFSAT + + L++ +I+ V T ++Q +V
Sbjct: 206 IKILPNEDRQSMLFSATQTTKVEDLARISLRKGPLFINVVSEKDSSTADGLEQGYVVCES 265
Query: 612 ELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRD 671
+ F +L LK + K+IVF S+ LL + + V E++ ++ Q R
Sbjct: 266 DKRFLLLFSFLKRN----QKKKIIVFLSSCNSVKYHAELLNYIDLPVLELHGKQKQQKRT 321
Query: 672 RISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGK-EGE 730
EF ++R ILV +DV+ARG+D P V ++Q P D YIHR+GRT R K +G+
Sbjct: 322 NTFFEFCNAERGILVCTDVAARGLDIPAVDWIIQFDPPDDPRDYIHRVGRTARGTKGKGK 381
Query: 731 GVLLLAPWEEYFLDDLK--DLPLDKLQLPH---LNPEIQLQMDNHMAKIDNNVKEAAYHA 785
++ LAP E FL LK +PL++ + P N + QL+ + + + Y +
Sbjct: 382 SLMFLAPSELGFLRYLKAAKVPLNEYEFPTNKIANVQSQLEKLIKSNYYLHQIAKDGYRS 441
Query: 786 WLGYY--NSIREIGR-DKTTLVELANKFAQSIGLQRPP 820
+L Y +S++ + + DK LV K A+S G PP
Sbjct: 442 YLQAYASHSLKTVYQIDKLDLV----KVARSFGFPIPP 475
>gi|215482158|ref|YP_002324340.1| DEAD/DEAH box helicase [Acinetobacter baumannii AB307-0294]
gi|332868649|ref|ZP_08438296.1| DEAD/DEAH box helicase [Acinetobacter baumannii 6013113]
gi|403674395|ref|ZP_10936653.1| DEAD/DEAH box helicase [Acinetobacter sp. NCTC 10304]
gi|421621590|ref|ZP_16062506.1| DEAD/DEAH box helicase [Acinetobacter baumannii OIFC074]
gi|421624521|ref|ZP_16065389.1| DEAD/DEAH box helicase [Acinetobacter baumannii OIFC098]
gi|421641753|ref|ZP_16082284.1| DEAD/DEAH box helicase [Acinetobacter baumannii IS-235]
gi|421647827|ref|ZP_16088238.1| DEAD/DEAH box helicase [Acinetobacter baumannii IS-251]
gi|421649960|ref|ZP_16090342.1| DEAD/DEAH box helicase [Acinetobacter baumannii OIFC0162]
gi|421654460|ref|ZP_16094787.1| DEAD/DEAH box helicase [Acinetobacter baumannii Naval-72]
gi|421659596|ref|ZP_16099812.1| DEAD/DEAH box helicase [Acinetobacter baumannii Naval-83]
gi|421661248|ref|ZP_16101425.1| DEAD/DEAH box helicase [Acinetobacter baumannii OIFC110]
gi|421673855|ref|ZP_16113792.1| DEAD/DEAH box helicase [Acinetobacter baumannii OIFC065]
gi|421695693|ref|ZP_16135298.1| DEAD/DEAH box helicase [Acinetobacter baumannii WC-692]
gi|421698540|ref|ZP_16138082.1| DEAD/DEAH box helicase [Acinetobacter baumannii IS-58]
gi|421796556|ref|ZP_16232616.1| DEAD/DEAH box helicase [Acinetobacter baumannii Naval-21]
gi|421800253|ref|ZP_16236232.1| DEAD/DEAH box helicase [Acinetobacter baumannii Canada BC1]
gi|421804005|ref|ZP_16239917.1| DEAD/DEAH box helicase [Acinetobacter baumannii WC-A-694]
gi|445489836|ref|ZP_21458844.1| DEAD/DEAH box helicase [Acinetobacter baumannii AA-014]
gi|213986281|gb|ACJ56580.1| Cold-shock DEAD box protein A(ATP-dependent RNA helicasedeaD)
[Acinetobacter baumannii AB307-0294]
gi|332733221|gb|EGJ64416.1| DEAD/DEAH box helicase [Acinetobacter baumannii 6013113]
gi|404565211|gb|EKA70381.1| DEAD/DEAH box helicase [Acinetobacter baumannii WC-692]
gi|404572840|gb|EKA77882.1| DEAD/DEAH box helicase [Acinetobacter baumannii IS-58]
gi|408510231|gb|EKK11893.1| DEAD/DEAH box helicase [Acinetobacter baumannii Naval-72]
gi|408512359|gb|EKK14004.1| DEAD/DEAH box helicase [Acinetobacter baumannii OIFC0162]
gi|408514505|gb|EKK16111.1| DEAD/DEAH box helicase [Acinetobacter baumannii IS-235]
gi|408516021|gb|EKK17600.1| DEAD/DEAH box helicase [Acinetobacter baumannii IS-251]
gi|408697499|gb|EKL43011.1| DEAD/DEAH box helicase [Acinetobacter baumannii OIFC074]
gi|408701178|gb|EKL46617.1| DEAD/DEAH box helicase [Acinetobacter baumannii OIFC098]
gi|408706929|gb|EKL52223.1| DEAD/DEAH box helicase [Acinetobacter baumannii Naval-83]
gi|408716097|gb|EKL61218.1| DEAD/DEAH box helicase [Acinetobacter baumannii OIFC110]
gi|410386073|gb|EKP38557.1| DEAD/DEAH box helicase [Acinetobacter baumannii OIFC065]
gi|410398805|gb|EKP51011.1| DEAD/DEAH box helicase [Acinetobacter baumannii Naval-21]
gi|410408461|gb|EKP60429.1| DEAD/DEAH box helicase [Acinetobacter baumannii Canada BC1]
gi|410412471|gb|EKP64330.1| DEAD/DEAH box helicase [Acinetobacter baumannii WC-A-694]
gi|444766278|gb|ELW90553.1| DEAD/DEAH box helicase [Acinetobacter baumannii AA-014]
Length = 586
Score = 209 bits (531), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 128/379 (33%), Positives = 202/379 (53%), Gaps = 19/379 (5%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
K F E + +AL G+ T VQE ++ A LEGKD +V ++TG+GK+ AFLLP +
Sbjct: 3 KTFAEFSLHETLQQALEGLGFTNPTPVQEQSIPAALEGKDLLVSSQTGSGKTAAFLLPTL 62
Query: 439 EAVLKATS----SSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGT 494
+ + + V +L+LCPTRELA Q++ +AIA +++ G+ + ++GG
Sbjct: 63 HNLAGQDTFVPFKERMKAVTQPSILVLCPTRELAQQVSQDAIAFVRHMKGVRIAAIMGGM 122
Query: 495 RFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKD 554
F ++L+ Q++VATPGRLLD + + ++L + L++DEAD +LDLGF +D
Sbjct: 123 PFGKQIQQLKG--AQVVVATPGRLLDLVNRRQ---LKLDKVDALIVDEADRMLDLGFSED 177
Query: 555 VENIVDCLPRRRQSLLFSATMPKELVLKREHTYIDTVGLGSVETPVKIKQSCLVAPH--- 611
+E I D R Q+L+FSAT ++ E + + ++ET H
Sbjct: 178 LEAISDLAANRGQTLMFSATFADRIIRLAERMMNEPERI-AIETGHSTNTDITQTLHWTD 236
Query: 612 --ELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLY 669
E ++L H L + L + +VF ST T +L L E +V ++ PQ
Sbjct: 237 GFEHKKKLLTHWLADETLD----QAVVFASTQEDTDMLAEELAEAGHSVVALHGAMPQTV 292
Query: 670 RDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEG 729
R+R R + ILV +DV+ARG+D P ++ V+ G+P E Y+HR+GRTGR G+ G
Sbjct: 293 RNRRLRSIREGRAKILVATDVAARGLDVPTISHVINFGLPMKHEDYVHRIGRTGRAGRTG 352
Query: 730 EGVLLLAPWEEYFLDDLKD 748
+ + L E + L+D
Sbjct: 353 QAITLATYRERGKIRALED 371
>gi|89075608|ref|ZP_01162009.1| putative ATP-dependent RNA helicase [Photobacterium sp. SKA34]
gi|89048615|gb|EAR54188.1| putative ATP-dependent RNA helicase [Photobacterium sp. SKA34]
Length = 446
Score = 209 bits (531), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 137/369 (37%), Positives = 206/369 (55%), Gaps = 21/369 (5%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F + G+ P +K + + + T +Q+ + + GKD + +KTG+GK++AFLLPA++
Sbjct: 3 FKDLGLDPRLLKKINHLAFDRATEIQQTAIPVAIAGKDILASSKTGSGKTLAFLLPAMQR 62
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+ + S T+ P VLIL PTRELA Q+ A+ L G L +VGG F
Sbjct: 63 MYR--SKPFTRRDP--RVLILTPTRELAKQVFAQLRTLNAGTPYDGTL-IVGGENFNDQV 117
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
+ L +DP +VATPGRL DH+E++S L GL+ML+LDEAD +LDLGF + I +
Sbjct: 118 KALRNDPM-FVVATPGRLADHLEHRS---THLDGLEMLILDEADRILDLGFEAQLRRINE 173
Query: 561 CL-PRRRQSLLFSATMPKELVLKREHTYIDT---VGLG-SVETPVKIKQSCLVAPHELHF 615
RRRQ+L+FSAT+ V++ +D + +G S E I Q ++ H H
Sbjct: 174 AANHRRRQTLMFSATLDHSDVVEIASEMLDNPKRISIGHSAEEHKDITQRFILCDHLDHK 233
Query: 616 QILHHLLKEHILGTPDYK-VIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRIS 674
Q L + IL T DYK VI+F +T T L L E K+ + Q R+ I
Sbjct: 234 QAL----LDKILETQDYKQVIIFTATRADTDRLTAELNERKLKAVALSGSLNQNQRNSIM 289
Query: 675 EEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLL 734
+F + ILVT+D+++RG+D +V+ V+ +P E+Y+HR+GRTGR G +G+ V L
Sbjct: 290 SQFERTCHKILVTTDIASRGLDIDNVSLVINFDMPKHAEEYVHRVGRTGRAGNKGDAVSL 349
Query: 735 LAP--WEEY 741
+ P W+ +
Sbjct: 350 VGPKDWKSF 358
>gi|302902561|ref|XP_003048671.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256729605|gb|EEU42958.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 804
Score = 209 bits (531), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 159/501 (31%), Positives = 252/501 (50%), Gaps = 44/501 (8%)
Query: 354 EISKNKLNGNGEKKEKREEEPI--LSQ------------KRFDECGISPLTIKALTAAGY 399
++ KN ++K KRE+E + L Q K F +S T L A+ +
Sbjct: 13 KVQKNGRTEQRQQKRKREQEDLQQLEQRVIDLDPKSDAIKNFSHLPLSVPTASGLEASHF 72
Query: 400 IQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLVPPIYVL 459
+T VQ + L+G D + AKTG+GK++AFL+P +E + +A + L L
Sbjct: 73 QVLTDVQAQAIPLALKGNDVLGAAKTGSGKTLAFLIPVLEKLYRAQWTEYDGL----GAL 128
Query: 460 ILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILVATPGRLL 519
IL PTRELA QI + +NH L ++GG K + RL D ILV TPGR+L
Sbjct: 129 ILSPTRELAVQIFEVLRKVGRNHVFSAGL-VIGGKSLKEEAERL--DRMNILVCTPGRML 185
Query: 520 DHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQSLLFSATMPKEL 579
H++ +G L++LVLDEAD ++D+GF+ V+ +V+ LP+ RQ+L+FSAT K++
Sbjct: 186 QHLDQTAGFDAN--NLQILVLDEADRIMDMGFQSAVDALVEHLPKSRQTLMFSATQSKKV 243
Query: 580 -----VLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILHHLLKEHILGTPDYKV 634
+ ++ Y+ + TP ++Q + P L+ +K ++ K+
Sbjct: 244 SDLARLSLKDPEYVSVHEAAASATPTTLQQHYISTPLTEKLDTLYGFIKANLKS----KI 299
Query: 635 IVFCSTGMVTSLLYLLLREMK--MNVREMYSRKPQLYRDRISEEFRASKRLILVTSDVSA 692
IVF S+G +Y R ++ + + ++ R+ Q+ R I+ F A+K L +DV A
Sbjct: 300 IVFLSSGKQVRFVYESFRHLQPGIPLLHLHGRQKQIARMEITSRFTAAKHSCLFATDVVA 359
Query: 693 RGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLAPWEE-YFLDDL--KDL 749
RG+D+P V V+Q P D + YIHR+GRT R G VL L P EE L L K +
Sbjct: 360 RGIDFPAVDWVIQADCPEDVDTYIHRVGRTARYQSNGRAVLFLDPSEEPGMLKKLEQKKI 419
Query: 750 PLDKLQLPHLNPEIQLQMDNHMAKIDNNVKEAAYHAWLGYYNSIREIGRDKTTL----VE 805
P+ ++ + + M + ++K A++ Y SI I +DK ++
Sbjct: 420 PIQRVNVKEKKKKNIKDHLQSMCFQNPDLKYLGQKAFISYAKSIY-IQKDKDVFKFDKLD 478
Query: 806 LANKFAQSIGLQRPPPL-FRK 825
L + FA S+GL P + F+K
Sbjct: 479 L-DGFAASLGLPGTPQIKFQK 498
>gi|239503259|ref|ZP_04662569.1| Cold-shock DEAD box protein A(ATP-dependent RNA helicasedeaD)
[Acinetobacter baumannii AB900]
gi|421680324|ref|ZP_16120179.1| DEAD/DEAH box helicase [Acinetobacter baumannii OIFC111]
gi|410389693|gb|EKP42104.1| DEAD/DEAH box helicase [Acinetobacter baumannii OIFC111]
Length = 586
Score = 209 bits (531), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 128/379 (33%), Positives = 202/379 (53%), Gaps = 19/379 (5%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
K F E + +AL G+ T VQE ++ A LEGKD +V ++TG+GK+ AFLLP +
Sbjct: 3 KTFAEFSLHETLQQALEGLGFTNPTPVQEQSIPAALEGKDLLVSSQTGSGKTAAFLLPTL 62
Query: 439 EAVLKATS----SSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGT 494
+ + + V +L+LCPTRELA Q++ +AIA +++ G+ + ++GG
Sbjct: 63 HNLAGQDTFVPFKERMKAVTQPSILVLCPTRELAQQVSQDAIAFVRHMKGVRIAAIMGGM 122
Query: 495 RFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKD 554
F ++L+ Q++VATPGRLLD + + ++L + L++DEAD +LDLGF +D
Sbjct: 123 PFGKQIQQLKG--AQVVVATPGRLLDLVNRRQ---LKLDKVDALIVDEADRMLDLGFSED 177
Query: 555 VENIVDCLPRRRQSLLFSATMPKELVLKREHTYIDTVGLGSVETPVKIKQSCLVAPH--- 611
+E I D R Q+L+FSAT ++ E + + ++ET H
Sbjct: 178 LEAISDLAANRGQTLMFSATFADRIIRLAERMMNEPERI-AIETGHSTNTDITQTLHWTD 236
Query: 612 --ELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLY 669
E ++L H L + L + +VF ST T +L L E +V ++ PQ
Sbjct: 237 GFEHKKKLLTHWLADETLD----QAVVFASTQEDTDMLAEELAEAGHSVVALHGAMPQTV 292
Query: 670 RDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEG 729
R+R R + ILV +DV+ARG+D P ++ V+ G+P E Y+HR+GRTGR G+ G
Sbjct: 293 RNRRLRSIREGRAKILVATDVAARGLDVPTISHVINFGLPMKHEDYVHRIGRTGRAGRTG 352
Query: 730 EGVLLLAPWEEYFLDDLKD 748
+ + L E + L+D
Sbjct: 353 QAITLATYRERGKIRALED 371
>gi|251796178|ref|YP_003010909.1| DEAD/DEAH box helicase [Paenibacillus sp. JDR-2]
gi|247543804|gb|ACT00823.1| DEAD/DEAH box helicase domain protein [Paenibacillus sp. JDR-2]
Length = 578
Score = 209 bits (531), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 136/367 (37%), Positives = 195/367 (53%), Gaps = 30/367 (8%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F GI P L + G T VQ+ + L G+D + +A+TGTGK+IAF LP
Sbjct: 5 FISMGIIPELTDVLQSNGITSPTPVQKKAIPVLLSGQDVIAQAQTGTGKTIAFTLP---- 60
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+L+ Q + LIL PTRELA QI +E + L G VL GG
Sbjct: 61 ILQRIDIDKEQ----VQALILTPTRELAIQITSE-LKKLAAAVGAKVLAAYGGQDVDAQI 115
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
R+L + P I+VATPGRL+DH+ ++ + L LKMLVLDEAD +L +GF +V+NIVD
Sbjct: 116 RKLNNSP-HIVVATPGRLIDHMRRET---INLGKLKMLVLDEADQMLHMGFLPEVQNIVD 171
Query: 561 CLPRRRQSLLFSATMPKELVLKREHTYIDTVGLGSVETPVKIK-QSCLVAPHELHFQIL- 618
PR RQ++LFSATMP ++ E+ ++TPV IK QS V + ++
Sbjct: 172 QTPRARQTMLFSATMPDQIKRLAENY---------MKTPVDIKIQSANVTLDNIKQLVIE 222
Query: 619 ------HHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDR 672
L I Y ++FC T + L L+++ E++ Q R++
Sbjct: 223 TTDRGRQKALISMIETQRPYLAVIFCRTKVRAKKLNKDLQDLGFESDELHGDLTQAKREQ 282
Query: 673 ISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGV 732
+ + FR +K ILV +DV+ARG+D VT V +P D E YIHR+GRTGR G+ G +
Sbjct: 283 VMKRFRDAKLQILVATDVAARGLDVEGVTHVFNFDVPTDSEIYIHRIGRTGRAGQRGTAI 342
Query: 733 LLLAPWE 739
+ +P++
Sbjct: 343 TIASPYD 349
>gi|348528897|ref|XP_003451952.1| PREDICTED: ATP-dependent RNA helicase DDX18 [Oreochromis niloticus]
Length = 656
Score = 209 bits (531), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 151/452 (33%), Positives = 247/452 (54%), Gaps = 35/452 (7%)
Query: 386 ISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKAT 445
+S T+K + G+ MT +Q ++ LEG+D + AKTG+GK++AFL+P IE + K
Sbjct: 171 VSENTLKGVKGMGFEHMTEIQHKSIRPLLEGRDVLAAAKTGSGKTLAFLIPCIELIYK-- 228
Query: 446 SSSTTQLVP--PIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRL 503
+ +P V+IL PTRELA Q L+ +H L ++GG+ + ++L
Sbjct: 229 ----LKFMPRNGTGVIILSPTRELAMQTYGVLKELMTHHVHTYGL-IMGGSNRSAEAQKL 283
Query: 504 ESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLP 563
++ I+VATPGRLLDH++N G + L+ L++DEAD +L++GF ++++ I+ LP
Sbjct: 284 -ANGVNIVVATPGRLLDHLQNTPGFMYK--NLQCLIIDEADRILEVGFEEELKQIIKLLP 340
Query: 564 RRRQSLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQI 617
+RRQ++LFSAT ++ + LK+E Y+ T ++Q +V P E F +
Sbjct: 341 KRRQTMLFSATQTRKVEDLARISLKKEPLYVGVDDNKDKATVDGLEQGYVVCPSEKRFLL 400
Query: 618 LHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEF 677
L LK++ K++VF S+ M Y LL + + V ++ ++ Q R +F
Sbjct: 401 LFTFLKKN----RKKKLMVFFSSCMSVKFHYELLNYIDLPVMAIHGKQKQTKRTTTFFQF 456
Query: 678 RASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEG--VLLL 735
+ IL+ +DV+ARG+D P+V +VQ P D ++YIHR+GRT R G +G G +L+L
Sbjct: 457 CNADSGILLCTDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTAR-GIDGRGHALLIL 515
Query: 736 APWEEYFLDDLKD--LPLDKLQLPHLN-PEIQLQMDNHMAKIDNNVKEA--AYHAWLGYY 790
P E FL LK +PL + + +IQ Q++ + K K A AY +++ Y
Sbjct: 516 RPEELGFLRFLKQAKVPLSEFEFSWSKISDIQSQLEKLIEKNYYLHKSAQEAYKSYVRAY 575
Query: 791 N--SIREIGRDKTTLVELANKFAQSIGLQRPP 820
+ S+++I T + + A S G + PP
Sbjct: 576 DSHSLKQIYNINTLNLPMV---ALSFGFKVPP 604
>gi|281182661|ref|NP_001162381.1| ATP-dependent RNA helicase DDX18 [Papio anubis]
gi|162415904|gb|ABX89268.1| DEAD box polypeptide 18 (predicted) [Papio anubis]
Length = 670
Score = 209 bits (531), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 153/451 (33%), Positives = 245/451 (54%), Gaps = 41/451 (9%)
Query: 390 TIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSST 449
T+KA+ G+ MT +Q ++ LEG+D + AKTG+GK++AFL+PA+E ++K
Sbjct: 190 TLKAIKEMGFTNMTEIQHKSVRPLLEGRDLLAAAKTGSGKTLAFLIPAVELIVK------ 243
Query: 450 TQLVP--PIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDP 507
+ +P VLIL PTRELA Q L+ +H L ++GG+ + ++L ++
Sbjct: 244 LKFMPRNGTGVLILSPTRELAMQTFGVLKELMTHHVHTYGL-IMGGSNRSAEAQKL-ANG 301
Query: 508 CQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQ 567
I+VATPGRLLDH++N G + L+ LV+DEAD +LD+GF ++++ I+ LP RRQ
Sbjct: 302 INIIVATPGRLLDHMQNTPGFMYK--NLQCLVIDEADRILDVGFEEELKQIIKLLPTRRQ 359
Query: 568 SLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILHHL 621
++LFSAT ++ + LK+E Y+ + T ++Q +V P E F +L
Sbjct: 360 TMLFSATQTRKVEDLARISLKKEPLYVGVDDDKANATVDGLEQGYVVCPSEKRFLLLFTF 419
Query: 622 LKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEFRASK 681
LK++ K++VF S+ M Y LL + + V ++ ++ Q R +F +
Sbjct: 420 LKKN----RKKKLMVFFSSCMSVKYHYELLNYIDLPVLAIHGKQKQNKRTTTFFQFCNAD 475
Query: 682 RLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEG--VLLLAPWE 739
L+ +DV+ARG+D P+V +VQ P D ++YIHR+GRT R G G G +L+L P E
Sbjct: 476 SGTLLCTDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTAR-GLNGRGHALLILRPEE 534
Query: 740 EYFLDDLKD--LPLDKLQLPHLN-PEIQLQMDNHMAKIDNNVKEAAYHAWLGYYNSIREI 796
FL LK +PL + +IQ Q++ + K + + ++A A+ Y IR
Sbjct: 535 LGFLRYLKQSKVPLSEFDFSWSKISDIQSQLEKLIEK-NYFLHKSAQEAYKSY---IR-- 588
Query: 797 GRDKTTLVELAN-------KFAQSIGLQRPP 820
D +L ++ N + A S G + PP
Sbjct: 589 AYDSHSLKQIFNVNNLNLPQVALSFGFKVPP 619
>gi|424058531|ref|ZP_17796028.1| hypothetical protein W9K_02859 [Acinetobacter baumannii Ab33333]
gi|404665773|gb|EKB33735.1| hypothetical protein W9K_02859 [Acinetobacter baumannii Ab33333]
Length = 586
Score = 209 bits (531), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 128/379 (33%), Positives = 202/379 (53%), Gaps = 19/379 (5%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
K F E + +AL G+ T VQE ++ A LEGKD +V ++TG+GK+ AFLLP +
Sbjct: 3 KTFAEFSLHETLQQALEGLGFTNPTPVQEQSIPAALEGKDLLVSSQTGSGKTAAFLLPTL 62
Query: 439 EAVLKATS----SSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGT 494
+ + + V +L+LCPTRELA Q++ +AIA +++ G+ + ++GG
Sbjct: 63 HNLAGQDTFVPFKERMKAVTQPSILVLCPTRELAQQVSQDAIAFVRHMKGVRIAAIMGGM 122
Query: 495 RFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKD 554
F ++L+ Q++VATPGRLLD + + ++L + L++DEAD +LDLGF +D
Sbjct: 123 PFGKQIQQLKG--AQVVVATPGRLLDLVNRRQ---LKLDKVDALIVDEADRMLDLGFSED 177
Query: 555 VENIVDCLPRRRQSLLFSATMPKELVLKREHTYIDTVGLGSVETPVKIKQSCLVAPH--- 611
+E I D R Q+L+FSAT ++ E + + ++ET H
Sbjct: 178 LEAISDLAANRGQTLMFSATFADRIIRLAERMMNEPERI-AIETGHSTNTDITQTLHWTD 236
Query: 612 --ELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLY 669
E ++L H L + L + +VF ST T +L L E +V ++ PQ
Sbjct: 237 GFEHKKKLLTHWLADETLD----QAVVFASTQEDTDMLAEELAEAGHSVVALHGAMPQTV 292
Query: 670 RDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEG 729
R+R R + ILV +DV+ARG+D P ++ V+ G+P E Y+HR+GRTGR G+ G
Sbjct: 293 RNRRLRSIREGRAKILVATDVAARGLDVPTISHVINFGLPMKHEDYVHRIGRTGRAGRTG 352
Query: 730 EGVLLLAPWEEYFLDDLKD 748
+ + L E + L+D
Sbjct: 353 QAITLATYRERGKIRALED 371
>gi|393775871|ref|ZP_10364176.1| atp-dependent rna helicase [Ralstonia sp. PBA]
gi|392717127|gb|EIZ04696.1| atp-dependent rna helicase [Ralstonia sp. PBA]
Length = 507
Score = 208 bits (530), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 131/373 (35%), Positives = 200/373 (53%), Gaps = 10/373 (2%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
FD G+ ++A+T GY T +Q + ++G+D + A+TGTGK+ F LP I+
Sbjct: 11 FDSFGLHADILRAITEQGYRVATPIQAQAIPVVMQGRDVMGAAQTGTGKTAGFSLPIIQR 70
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+L S+ST+ P+ L+L PTRELA Q+ + +A H + + GG
Sbjct: 71 LLPFASTSTSPARHPVRALMLTPTRELADQVY-DNVAKYAKHTALRSTVVFGGVDMNPQT 129
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
L +ILVATPGRLLDH++ K+ V L ++MLVLDEAD +LD+GF D++ I++
Sbjct: 130 AELRRG-VEILVATPGRLLDHVQQKT---VNLSQVQMLVLDEADRMLDMGFLPDLQRILN 185
Query: 561 CLPRRRQSLLFSATMPKELVLKREHTYI-DTVGLG---SVETPVKIKQSCLVAPHELHFQ 616
LP +RQ+LLFSAT + + K +Y+ D V + S + Q + P
Sbjct: 186 LLPAQRQTLLFSATFSGD-IKKLAASYLRDPVTIEVARSNSASSNVTQQVFMVPEARKQA 244
Query: 617 ILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEE 676
+ HLLK+ + IVF ++ + S L L +N ++ K Q R + E
Sbjct: 245 AVVHLLKQRAEQGLPKQCIVFTNSKLGCSRLARQLEREGINASAIHGDKTQSERMQTLEG 304
Query: 677 FRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLA 736
F+ LV +DV+ARG+D D+ V+ +P + E Y+HR+GRTGR G G+ + L A
Sbjct: 305 FKQGTIDALVATDVAARGLDIADMPCVINFDLPYNAEDYVHRIGRTGRAGATGDAMSLCA 364
Query: 737 PWEEYFLDDLKDL 749
P +E L D++ L
Sbjct: 365 PGDERLLADIEKL 377
>gi|216397600|gb|ACJ72832.1| DEAD box polypeptide 18 (predicted) [Oryctolagus cuniculus]
Length = 622
Score = 208 bits (530), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 154/451 (34%), Positives = 246/451 (54%), Gaps = 41/451 (9%)
Query: 390 TIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSST 449
T+KA+ G+ MT +Q ++ LEG+D + AKTG+GK++AFL+PA+E ++K
Sbjct: 142 TLKAIKEMGFTNMTEIQHKSVRPLLEGRDLLAAAKTGSGKTLAFLIPAVELIVK------ 195
Query: 450 TQLVP--PIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDP 507
+ +P VLIL PTRELA Q L+ +H L ++GG+ + ++L ++
Sbjct: 196 LKFMPRNGTGVLILSPTRELAMQTFGVLKELMTHHVHTYGL-IMGGSNRSAEAQKL-ANG 253
Query: 508 CQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQ 567
I+VATPGRLLDH++N G + L+ LV+DEAD +LD+GF ++++ I+ LP RRQ
Sbjct: 254 INIIVATPGRLLDHMQNTPGFMYK--NLQCLVIDEADRILDVGFEEELKQIIKLLPTRRQ 311
Query: 568 SLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILHHL 621
++LFSAT ++ + LK+E Y+ + T ++Q +V P E F +L
Sbjct: 312 TMLFSATQTRKVEDLARISLKKEPLYVGVDDDKANATVDGLEQGYVVCPSEKRFLLLFTF 371
Query: 622 LKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEFRASK 681
LK++ K++VF S+ M Y LL + + V ++ ++ Q R +F +
Sbjct: 372 LKKN----RKKKLMVFFSSCMSVKYHYELLNYIDLPVLAIHGKQKQNKRTTTFFQFCNAD 427
Query: 682 RLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEG--VLLLAPWE 739
IL+ +DV+ARG+D P+V +VQ P D ++YIHR+GRT R G G G +L+L P E
Sbjct: 428 SGILLCTDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTAR-GLNGRGHALLILRPEE 486
Query: 740 EYFLDDLKD--LPLDKLQLPHLN-PEIQLQMDNHMAKIDNNVKEAAYHAWLGYYNSIREI 796
FL LK +PL + +IQ Q++ + K + + ++A A+ Y IR
Sbjct: 487 LGFLRYLKQSKVPLSEFDFSWSKISDIQSQLEKLIEK-NYFLHKSAQEAYKSY---IR-- 540
Query: 797 GRDKTTLVELAN-------KFAQSIGLQRPP 820
D +L ++ N + A S G + PP
Sbjct: 541 AYDSHSLKQIFNVNSLNLPQVALSFGFKVPP 571
>gi|449439479|ref|XP_004137513.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 51-like [Cucumis
sativus]
Length = 608
Score = 208 bits (530), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 140/434 (32%), Positives = 235/434 (54%), Gaps = 32/434 (7%)
Query: 375 ILSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFL 434
I+S FD +S T++A+ G+ MT++Q+ + L GKD + A+TG+GK++AFL
Sbjct: 117 IMSTVSFDSLELSENTLRAIKDMGFEHMTQIQDRAIPPFLAGKDVLGAARTGSGKTLAFL 176
Query: 435 LPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHD-GIGVLTLVGG 493
+PA+E + + + + V+++CPTRELA QI A LLK H +G++T GG
Sbjct: 177 IPAVELLQRISFTPYNG----TGVIVICPTRELAIQIHEVANELLKYHSQTLGIVT--GG 230
Query: 494 TRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRK 553
+ + + + + +L+ATPGRLLDH+++ + LK L++DEAD +L+ F +
Sbjct: 231 SSRQAEANHI-TRGVNLLIATPGRLLDHLQHTKNFVFK--NLKCLIIDEADRILETNFEE 287
Query: 554 DVENIVDCLPRRRQSLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSCL 607
+++ I+ LP+ RQ+ LFSAT ++ L + YID + T ++Q
Sbjct: 288 EMKQIIKLLPKNRQTALFSATQTQKVEDLVRLSFQSTPVYIDVDDGRTKVTNEGLQQGYC 347
Query: 608 VAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQ 667
V P F +L+ LK + KV+VF S+ + LLR +K++ +++ ++ Q
Sbjct: 348 VVPSAKRFIVLYSFLKRSL----SKKVMVFFSSCNSVTFHADLLRHIKIDCMDIHGKQKQ 403
Query: 668 LYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGR-EG 726
R F +++ IL+ +DV+ARG+D P V +VQ P + ++YIHR+GRT R EG
Sbjct: 404 QKRTSTFFAFNKAEKGILLCTDVAARGLDIPAVDWIVQYDPPDEPKEYIHRVGRTARGEG 463
Query: 727 KEGEGVLLLAPWEEYFLDDLK--DLPLDKLQLPHLNPEIQLQMDNHMAKID------NNV 778
+G +L L P E FL LK +P+ + + + + + +H+ K+ N
Sbjct: 464 SKGNALLFLIPEELQFLRYLKAAKVPVKEYE---FSDKRLANVQSHLEKLVGSNYHLNKA 520
Query: 779 KEAAYHAWLGYYNS 792
+ AY +L YNS
Sbjct: 521 AKDAYRTYLLAYNS 534
>gi|336271030|ref|XP_003350274.1| hypothetical protein SMAC_01168 [Sordaria macrospora k-hell]
gi|380095671|emb|CCC07145.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 825
Score = 208 bits (530), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 129/369 (34%), Positives = 201/369 (54%), Gaps = 20/369 (5%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
K F + + T L A+ + MT VQ+A + L+G+D + A+TG+GK++AFL+P +
Sbjct: 59 KNFTDLPLCEPTASGLRASHFEIMTDVQKAAIPLALKGQDILGAARTGSGKTLAFLVPVL 118
Query: 439 EAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
E + +A + L LI+ PTRELA QI + +NH L ++GG K
Sbjct: 119 EKLYRARWTELDGL----GALIISPTRELAVQIFEVLRKIGRNHSFSAGL-VIGGKSLKE 173
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
+ RL ILV TPGR+L H++ +G V L++LVLDEAD ++D+GF++ V+ +
Sbjct: 174 EAERLSR--MNILVCTPGRMLQHLDQTAGFDVD--NLQILVLDEADRIMDMGFQQAVDAL 229
Query: 559 VDCLPRRRQSLLFSATMPKEL-----VLKREHTYIDTVGLGSVETPVKIKQSCLVAPHEL 613
V+ LP+ RQ+LLFSAT K + + ++ Y+ + TPV ++Q +V P
Sbjct: 230 VEHLPKSRQTLLFSATQSKRVSDLARLSLKDPEYVSVHEAAASATPVNLQQHYIVTPLPE 289
Query: 614 HFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNV--REMYSRKPQLYRD 671
L L+ ++ K+IVF S+G +Y + M+ + ++ R+ Q+ R
Sbjct: 290 KLDTLWGFLRTNL----KSKIIVFLSSGKQVRFVYESFKRMQPGIPLLHLHGRQKQIARL 345
Query: 672 RISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEG 731
I+ F ++K L +DV ARG+D+P V V+Q P D + YIHR+GRT R +G
Sbjct: 346 EITNRFTSAKYSCLFATDVVARGVDFPAVDWVIQADCPEDADTYIHRVGRTARYESKGRA 405
Query: 732 VLLLAPWEE 740
VL L P EE
Sbjct: 406 VLFLDPSEE 414
>gi|379012782|ref|YP_005270594.1| putative RNA helicase [Acetobacterium woodii DSM 1030]
gi|375303571|gb|AFA49705.1| putative RNA helicase [Acetobacterium woodii DSM 1030]
Length = 551
Score = 208 bits (530), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 131/376 (34%), Positives = 209/376 (55%), Gaps = 27/376 (7%)
Query: 380 RFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIE 439
+F E I+ ++ + G+++MT +QE + + G D + K++TGTGK++AF +PAI
Sbjct: 2 KFTELEINEQLLRGIEEMGFVEMTEIQEQAIPQLMMGGDLIGKSQTGTGKTVAFAIPAI- 60
Query: 440 AVLKATSSSTTQLVPPI---YVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRF 496
T+L P I VL+LCPTRELA Q++ E +LK G+ VL + GG
Sbjct: 61 ----------TKLDPSIKKVQVLVLCPTRELAVQVSDEFKKVLKYQKGVKVLPIFGGASI 110
Query: 497 KVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVE 556
+ R L+S QI+V TPGR++DH+ K+ ++L + M+VLDEAD +L++GFR+D+E
Sbjct: 111 ETQIRELKSG-VQIVVGTPGRVMDHMRRKT---LKLSDISMVVLDEADEMLNMGFREDIE 166
Query: 557 NIVDCLPRRRQSLLFSATMPKELVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQ 616
I+D + Q++LFSATMPK +LK TY V + K + + +F
Sbjct: 167 LILDEIAHEIQTVLFSATMPKP-ILKIAETY----QKNPVLVEISPKNMVATSIEQKYFN 221
Query: 617 ILHHLLKEHILGTPD-YK---VIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDR 672
I H E + D YK ++FC+T + L+++ +V +++ Q+ R
Sbjct: 222 ISDHHKFEALTRLLDVYKPQRSLIFCNTKKYVDEITDDLKKLGYSVDKIHGDMRQMSRMA 281
Query: 673 ISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGV 732
+ ++F + ILV +DV+ARG+D DV V +P + E Y+HR+GRTGR GK G +
Sbjct: 282 VLKQFSRGQLNILVATDVAARGIDVDDVDIVFNYDVPDNEEYYVHRIGRTGRAGKSGISL 341
Query: 733 LLLAPWEEYFLDDLKD 748
L +++ L + D
Sbjct: 342 TLARSRDQFRLKKITD 357
>gi|322708287|gb|EFY99864.1| ATP-dependent RNA helicase DBP4 [Metarhizium anisopliae ARSEF 23]
Length = 796
Score = 208 bits (530), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 149/474 (31%), Positives = 245/474 (51%), Gaps = 32/474 (6%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
K F + +S TI + A+ + +T VQ+ + L+ D + AKTG+GK++AFL+P +
Sbjct: 50 KTFSDLPLSQPTISGIKASHFQTLTEVQQQAIPLALKDNDVLGAAKTGSGKTLAFLIPVL 109
Query: 439 EAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
E + +A + L LI+ PTRELA QI E + + + ++GG K
Sbjct: 110 EKLYRAQWTEFDGL----GALIISPTRELAVQIF-EVLRKIGRYHVFSAGLVIGGKNLKE 164
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
+ RL ILV TPGR+L H++ +G L++LVLDEAD ++D+GF+ V+ +
Sbjct: 165 EAERLAR--MNILVCTPGRMLQHLDQTAGFDAN--NLQILVLDEADRIMDMGFQSAVDAL 220
Query: 559 VDCLPRRRQSLLFSATMPKEL-----VLKREHTYIDTVGLGSVETPVKIKQSCLVAPHEL 613
V+ LP+ RQ+L+FSAT K++ + +E Y+ + TP ++Q + P
Sbjct: 221 VEHLPKSRQTLMFSATQSKKVSDLARLSLKEPEYVSVHEAATSATPTNLQQHYITTPLPE 280
Query: 614 HFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK--MNVREMYSRKPQLYRD 671
L+ LK ++ K+IVF S+G +Y R ++ + + ++ R+ Q+ R
Sbjct: 281 KLDTLYGFLKSNLKS----KIIVFLSSGKQVRFVYESFRHLQPGIPLLHLHGRQRQVARL 336
Query: 672 RISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEG 731
I+ F A+K L +DV ARG+D+P V V+QV P D + YIHR+GRT R +G
Sbjct: 337 EITSRFTAAKHSCLFATDVVARGIDFPAVDWVIQVDCPEDVDTYIHRVGRTARYQSKGRA 396
Query: 732 VLLLAPWEEYFLD---DLKDLPLDKLQLPHLNPE-IQLQMDNHMAKIDNNVKEAAYHAWL 787
VL L P EE + + K +P+ K+ + + I+ + N M + ++K A++
Sbjct: 397 VLFLDPSEEPGMVKRLEQKKIPIQKVNVREKKKKSIKNDLQN-MCFQNPDLKYLGQKAFI 455
Query: 788 GYYNSIREIGRDKTTL----VELANKFAQSIGLQRPPPL-FRKTALKMGLKDIP 836
Y +I + RDK ++L + FA +GL P + F K +K+ P
Sbjct: 456 SYSRAIH-LQRDKEVFKLDKLDL-DAFASGLGLPGTPQIKFHKGGDIKKIKNAP 507
>gi|331217930|ref|XP_003321643.1| hypothetical protein PGTG_03180 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309300633|gb|EFP77224.1| hypothetical protein PGTG_03180 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 646
Score = 208 bits (530), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 152/465 (32%), Positives = 232/465 (49%), Gaps = 29/465 (6%)
Query: 372 EEPILSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSI 431
+EP F +SP T KA+ G+ +MT VQ T+ + G+D + A+TG+GK++
Sbjct: 101 DEPEAYPSEFSSLDLSPPTAKAIQDMGFTKMTEVQARTIPPLMTGRDVLGAARTGSGKTL 160
Query: 432 AFLLPAIEAVLKATSSSTTQLVP--PIYVLILCPTRELASQIAAEAIALLKNHDGIGVLT 489
AFL+PA+E + S Q P +I+ PTRELA QI A L+K+H +
Sbjct: 161 AFLIPAVEML------SRLQFKPRNGTGTIIVSPTRELALQIFGVAQELMKHHSQTFAI- 213
Query: 490 LVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDL 549
++GG K + +L +L++TPGRLLDH++N G LK LV+DEAD +L++
Sbjct: 214 VIGGANRKAEAEKLVKG-VNLLISTPGRLLDHLQNTKGFV--FSNLKALVVDEADRILEI 270
Query: 550 GFRKDVENIVDCLP-RRRQSLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKI 602
GF ++ I+ LP RQS+LFSAT + + L+ YI+ T +
Sbjct: 271 GFEDEMRQIISLLPSENRQSMLFSATQTTKVQDLARISLRPGPLYINVDADKQEATVQGL 330
Query: 603 KQSCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMY 662
+Q +V + F +L LK+ + KVIVF S+ LL + + V +++
Sbjct: 331 EQGYVVCDSDKRFLLLFTFLKKSL----KKKVIVFFSSCNSVKYHAELLNYIDIPVLDLH 386
Query: 663 SRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRT 722
++ Q R EF + IL+ +DV+ARG+D P V ++Q P D YIHR+GRT
Sbjct: 387 GKQKQQKRTNTFFEFCNATTGILLCTDVAARGLDIPKVDWIIQFDPPDDPRDYIHRVGRT 446
Query: 723 GREGKEGEGVLLLAPWEEYFLDDLK--DLPLDKLQLPHLN-PEIQLQMDNHMAKIDNNVK 779
R GK G +L L P E FL LK +PL++ P +Q Q+ ++K + +
Sbjct: 447 ARAGKSGRSLLFLLPSELGFLRFLKMAKVPLNEYSFPMDKLANVQGQLTKLISK-NYYLH 505
Query: 780 EAAYHAWLGYYNSIREIGRDKTTLVEL--ANKFAQSIGLQRPPPL 822
++A + Y S K V NK Q+ G PP +
Sbjct: 506 QSARDGFRSYIQSYASYSLKKIFDVNKLDLNKVGQAFGFSVPPAV 550
>gi|330817865|ref|YP_004361570.1| ATP-dependent RNA helicase [Burkholderia gladioli BSR3]
gi|327370258|gb|AEA61614.1| Putative ATP-dependent RNA helicase 2 [Burkholderia gladioli BSR3]
Length = 485
Score = 208 bits (530), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 135/386 (34%), Positives = 212/386 (54%), Gaps = 21/386 (5%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
FD+ G++P +KA+ GY T +Q + L G+D + A+TGTGK+ +F LP I+
Sbjct: 13 FDQFGLAPDILKAIAEQGYTTPTPIQAKAIPVVLSGRDVMGAAQTGTGKTASFSLPIIQR 72
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+L +SS + P+ LIL PTRELA Q+AA A K H + + GG
Sbjct: 73 LLPQANSSASPARHPVRALILTPTRELADQVAANVHAYAK-HTALRSAVVFGGVDMNSQM 131
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
L +IL+ATPGRLLDH++ K+ L ++MLVLDEAD +LD+GF D++ I++
Sbjct: 132 AELRRG-VEILIATPGRLLDHVQQKTA---NLGQVQMLVLDEADRMLDMGFLPDLQRILN 187
Query: 561 CLPRRRQSLLFSATMPKELVLKREHTYID---TVGLG-SVETPVKIKQSCL-VAPHELHF 615
LP++RQ+LLFSAT E + K TY+ T+ + S T + Q +A +
Sbjct: 188 LLPKQRQTLLFSATFSPE-IKKLASTYLSNPQTIEVARSNATATNVTQVVYEIAEGDKQA 246
Query: 616 QILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISE 675
++ L+++ L +VIVFC++ + S L L + ++ + Q R + +
Sbjct: 247 AVV-KLIRDRSL----KQVIVFCNSKIGASRLARQLERDGVVATAIHGDRSQNERMQALD 301
Query: 676 EFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLL 735
F+ + LV +DV+ARG+D ++ +V+ +P + E Y+HR+GRTGR G G+ + L
Sbjct: 302 AFKRGEVEALVATDVAARGLDIAELPAVINFDLPFNAEDYVHRIGRTGRAGASGDALSLC 361
Query: 736 APWEEYFLDDL-----KDLPLDKLQL 756
+P E L D+ +DLPL L +
Sbjct: 362 SPNERKQLADIEKLIKRDLPLQPLAV 387
>gi|71908923|ref|YP_286510.1| helicase, C-terminal:DEAD/DEAH box helicase, N-terminal, partial
[Dechloromonas aromatica RCB]
gi|71848544|gb|AAZ48040.1| Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal
[Dechloromonas aromatica RCB]
Length = 507
Score = 208 bits (530), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 134/379 (35%), Positives = 207/379 (54%), Gaps = 9/379 (2%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F + G++P ++A+ GY + T +Q + + GKD + A+TGTGK+ AF LP ++
Sbjct: 25 FADLGLAPELLRAVLDEGYTKPTPIQAQAIPLVISGKDIMGGAQTGTGKTAAFTLPILQR 84
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+L SSS + P+ LIL PTRELA Q+ E++ H I + GG +
Sbjct: 85 ILPFASSSPSPAKHPVRALILAPTRELAMQVF-ESVKTYSKHTPIRAMCAYGGVDIRPQI 143
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
L+ +ILVATPGRLLDH+ENKS V ++ LVLDEAD +LD+GF DV I++
Sbjct: 144 AELKKG-VEILVATPGRLLDHVENKS---VSFNSVQALVLDEADRMLDMGFVPDVTRILN 199
Query: 561 CLPRRRQSLLFSATMPKELVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILHH 620
LP +RQSLLFSAT +E + K T + + L V ++ + H +
Sbjct: 200 MLPAQRQSLLFSATFSEE-IKKLADTMLKSPILIEVARRNQVSDTITHRVHPVSEYGKRG 258
Query: 621 LLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEFRAS 680
LL + + + IVFC T S L L+ + ++ K QL R + E F+
Sbjct: 259 LLTKLLKSGEIRQCIVFCRTKQGCSRLTRELQRAGIKADAIHGDKSQLERIKALEAFKGG 318
Query: 681 KRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLAPWEE 740
+ L+ +DV+ARG+D D+ V+ +P E Y+HR+GRTGR GK+G + L++ E
Sbjct: 319 ETDALIATDVAARGLDVDDLPYVINYELPHTPEDYVHRIGRTGRAGKKGNAISLVSAHEV 378
Query: 741 YFLDDLKDL---PLDKLQL 756
+L D++ L P++++++
Sbjct: 379 CYLVDIEKLIKRPIEQVEV 397
>gi|50427631|ref|XP_462428.1| DEHA2G20372p [Debaryomyces hansenii CBS767]
gi|74600402|sp|Q6BH93.1|HAS1_DEBHA RecName: Full=ATP-dependent RNA helicase HAS1
gi|49658098|emb|CAG90938.1| DEHA2G20372p [Debaryomyces hansenii CBS767]
Length = 568
Score = 208 bits (530), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 153/462 (33%), Positives = 248/462 (53%), Gaps = 44/462 (9%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F+E G+S T+KA+ G+ +MT+VQ T+ L G+D + AKTG+GK++AFL+PAIE
Sbjct: 106 FEEAGLSEPTLKAIKDMGFSKMTQVQAKTIPPLLAGRDVLGAAKTGSGKTLAFLIPAIEM 165
Query: 441 V--LKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
+ L+ + T V+++ PTRELA QI A L+ +H + + G R +
Sbjct: 166 LYSLRFKPRNGTG------VVVVSPTRELALQIFGVARELMAHHSQTFGIVIGGANRRQE 219
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
++ ++ +L+ATPGRLLDH++N G + +K LV+DEAD +L++GF ++++ I
Sbjct: 220 AEKLMKG--VNLLIATPGRLLDHLQNTQGFVFK--NVKALVIDEADRILEIGFEEEMKQI 275
Query: 559 VDCLPRR-RQSLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSCLVAPH 611
+ LP RQS+LFSAT + + L+ YI+ T ++Q +V
Sbjct: 276 IKILPNEDRQSMLFSATQTTKVEDLARISLRPGPLYINVASESEASTVAGLEQGYVVCES 335
Query: 612 ELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRD 671
+ F +L LK ++ K+IVF S+ LL + + V +++ ++ Q R
Sbjct: 336 DKRFLLLFSFLKRNV----KKKIIVFLSSCNCVKYFGELLNYIDLPVLDLHGKQKQQKRT 391
Query: 672 RISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEG 731
EF + + IL+ +DV+ARG+D P V ++Q P D YIHR+GRT R G G+G
Sbjct: 392 NTFFEFCNATQGILICTDVAARGLDIPAVDWIIQFDPPDDPRDYIHRVGRTAR-GTAGKG 450
Query: 732 --VLLLAPWEEYFLDDLK--DLPLDKLQLP-HLNPEIQLQMDNHMAKIDNNVKEAA---Y 783
++ L P E FL LK ++PL++ + P + +Q Q+ + K + + ++A Y
Sbjct: 451 KSLMFLTPSELGFLRYLKAANVPLNEYEFPTNKIANVQSQL-TKLIKGNYWLHQSAKDGY 509
Query: 784 HAWLGYYNS-----IREIGRDKTTLVELANKFAQSIGLQRPP 820
++L Y S + +I DK LV K A+S G PP
Sbjct: 510 RSYLQAYASHHLKTVYQI--DKLDLV----KVAKSFGFDVPP 545
>gi|209517599|ref|ZP_03266438.1| DEAD/DEAH box helicase domain protein [Burkholderia sp. H160]
gi|209502012|gb|EEA02029.1| DEAD/DEAH box helicase domain protein [Burkholderia sp. H160]
Length = 510
Score = 208 bits (530), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 135/383 (35%), Positives = 209/383 (54%), Gaps = 17/383 (4%)
Query: 377 SQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLP 436
S + FD+ G++P +KA+ +GY T +Q + L G+D + A+TGTGK+ +F LP
Sbjct: 31 STETFDQFGLAPDILKAIKESGYTSPTPIQAKAIPVVLAGRDVMGAAQTGTGKTASFSLP 90
Query: 437 AIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRF 496
I+ +L S+S + P+ LIL PTRELA Q+AA A K H + + GG
Sbjct: 91 IIQRLLPQASTSASPARHPVRALILTPTRELADQVAANVQAYAK-HTALRSAVVFGGVDM 149
Query: 497 KVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVE 556
+L +IL+ATPGRLLDH++ K+ L ++MLVLDEAD +LD+GF D++
Sbjct: 150 NPQSEQLRRG-VEILIATPGRLLDHVQQKTA---NLGQVQMLVLDEADRMLDMGFLPDLQ 205
Query: 557 NIVDCLPRRRQSLLFSATMPKELVLKREHTYI---DTVGLG-SVETPVKIKQSCLVAPHE 612
I++ LP+ RQ+LLFSAT E + K TY+ T+ + S T + Q
Sbjct: 206 RILNLLPKERQTLLFSATFSGE-IKKLAATYLRNPQTIEVARSNSTATNVTQVVYEVAEG 264
Query: 613 LHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDR 672
+ L++E L +VIVFC++ + S L L + ++ + Q R +
Sbjct: 265 DKTGAVVKLIRERGL----KQVIVFCNSKIGASRLARSLERDGVVATAIHGDRSQSERMQ 320
Query: 673 ISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGV 732
+ F+ + LV +DV+ARG+D ++ +V+ +P + E Y+HR+GRTGR G G+ +
Sbjct: 321 ALDAFKRGEVEALVATDVAARGLDIAELPAVINFDLPFNAEDYVHRIGRTGRAGASGDAL 380
Query: 733 LLLAPWEEYFLDDLKDL---PLD 752
L +P E L D++ L PLD
Sbjct: 381 SLCSPNERKQLADIEKLIKRPLD 403
>gi|401624291|gb|EJS42354.1| mss116p [Saccharomyces arboricola H-6]
Length = 666
Score = 208 bits (530), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 153/476 (32%), Positives = 247/476 (51%), Gaps = 39/476 (8%)
Query: 392 KALTAAGYIQMTRVQEATLSACL--EGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSST 449
KA+ + +T VQ+ T+ L E +D + +AKTGTGK+ AFL+P + ++ S
Sbjct: 118 KAIARMEFPCLTPVQQKTIKPILSSEDQDVIARAKTGTGKTFAFLIPIFQHLINTKLDSQ 177
Query: 450 TQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGI---GVLTLVGGTRFKVDQRRLESD 506
+ +I+ PTR+LA QI AE + + G+ ++LVGGT F+ ++
Sbjct: 178 YM----VKAVIVAPTRDLALQIEAEVKKIHDMNYGLKKYACVSLVGGTDFRAAMEKMNKL 233
Query: 507 PCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRR 566
I++ATPGRL+D +E S R + K VLDEAD LL++GFR D+E I L +
Sbjct: 234 RPNIVIATPGRLIDVLERYSNKFFRFVDYK--VLDEADRLLEIGFRDDLETISGILNEKN 291
Query: 567 -------QSLLFSATM-------PKELVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHE 612
++LLFSAT+ ++ K+E ++DTV E +I QS +V+
Sbjct: 292 SKSTDNIKTLLFSATLDDKVQKLANNIMNKKECLFLDTVDKNEPEAHERIDQSVVVSEKF 351
Query: 613 LH--FQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLR-EMKMN--VREMYSRKPQ 667
+ F + H+ K+ +YK I+F T TS L +L+ E K N + E + + Q
Sbjct: 352 ANSIFAAVEHIKKQITERDSNYKAIIFAPTVKFTSFLCNILQNEFKKNLPILEFHGKITQ 411
Query: 668 LYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGK 727
R + + F+ + ILV +DV ARGMD+P+V V+Q+G+P + YIHR+GRT R GK
Sbjct: 412 NKRTSLVKRFKREESGILVCTDVGARGMDFPNVHEVLQIGVPSELANYIHRIGRTARSGK 471
Query: 728 EGEGVLLLAPWEEYFLDDLKD---LPLDKLQLPHLNPEIQLQMDNHMAKIDNNVKEAAYH 784
EG VL + E F+ +LKD + + K + + EI+ ++ M + +++ +
Sbjct: 472 EGSSVLFICKEEMPFVKELKDAKNITIAKQETYEPSEEIKTEVLEAMGQDTDDLSDIIIS 531
Query: 785 AWLGYYNSIREI-GRDKTTLVELANKFAQSIGLQRPP---PLFRKTALKMGLKDIP 836
Y + I+E ++ L E+A+ + + L P P+ R+ K+GL P
Sbjct: 532 LISSYRSCIKEYRFSERRILPEIASSYG--VLLNDPQLKIPVSRRFLDKLGLSRSP 585
>gi|293401901|ref|ZP_06646041.1| DEAD/DEAH box family ATP-dependent RNA helicase
[Erysipelotrichaceae bacterium 5_2_54FAA]
gi|291304559|gb|EFE45808.1| DEAD/DEAH box family ATP-dependent RNA helicase
[Erysipelotrichaceae bacterium 5_2_54FAA]
Length = 580
Score = 208 bits (530), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 126/361 (34%), Positives = 196/361 (54%), Gaps = 21/361 (5%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F+E IS +KA+ GY T +Q ++ LEGKD + ++ TGTGK+ AF +PAIE
Sbjct: 4 FNELPISSEIMKAVEEMGYENATDIQAQSIPCILEGKDVLGRSNTGTGKTAAFGIPAIEK 63
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
V+ LI+CPTREL +Q+A E K +G+ ++ + GG Q
Sbjct: 64 VIPGNKFPNA--------LIICPTRELVTQVATELRKFSKYKEGVKIVPIYGGQPID-RQ 114
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
+L C I+V TPGR++DH+ ++ ++L + M++LDEAD +L++GF++D+E I+
Sbjct: 115 IQLLKRGCGIVVGTPGRIMDHLNRRT---LKLQDVNMIILDEADEMLNMGFKEDIEEILS 171
Query: 561 CLP--RRRQSLLFSATMPKELVLKREHTYIDTVGL---GSVETPVKIKQSCLVAPHELHF 615
+P Q++LFSAT P+ ++ E D V + S T ++Q AP
Sbjct: 172 MMPADNEHQTILFSATWPQAILKITEQFQKDPVRVEIKSSQRTIDTVEQIYYEAPRGKKA 231
Query: 616 QILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISE 675
L LL + PD ++FC+T + L L + + ++ Q +R R+ E
Sbjct: 232 NALRVLLNHY---DPDL-CMIFCNTKKMVDELCEELNKHDIKATSLHGDMKQEFRSRVME 287
Query: 676 EFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLL 735
+FR IL+ +DV+ARG+D D+ VV IP D E YIHR+GRTGR GK+G + L+
Sbjct: 288 QFRNGTSPILIATDVAARGIDVDDIDLVVNFDIPQDMEYYIHRVGRTGRAGKKGLAITLI 347
Query: 736 A 736
+
Sbjct: 348 S 348
>gi|311740664|ref|ZP_07714491.1| ATP-dependent RNA helicase DeaD [Corynebacterium pseudogenitalium
ATCC 33035]
gi|311304184|gb|EFQ80260.1| ATP-dependent RNA helicase DeaD [Corynebacterium pseudogenitalium
ATCC 33035]
Length = 619
Score = 208 bits (530), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 132/388 (34%), Positives = 207/388 (53%), Gaps = 26/388 (6%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F G+ ++A+ G+ + + +QE T+ +EG+D V A+TGTGK+ AF LP +
Sbjct: 57 FAHLGLPEKILEAVAKVGFTKPSPIQEETIPILMEGRDVVGLAQTGTGKTAAFALPVL-- 114
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
S T+ P L+L PTRELA Q+A + ++ G+ VL + GG + +
Sbjct: 115 -----SQIDTKARHP-QALVLAPTRELALQVADSFQSFAESLKGVEVLPIYGGQAYGIQL 168
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
L Q++V TPGR++DH+E S + L L+ LVLDEAD +L++GF++DVE I++
Sbjct: 169 SGLRRG-AQVIVGTPGRVIDHLEKGS---LDLSQLQFLVLDEADEMLNMGFQEDVERILE 224
Query: 561 CLPRRRQSLLFSATMPKELVLKREHTYIDTVGLGSVE----TPVKIKQSCLVAPHELHFQ 616
P R+Q LFSATMP + + Y+D +V+ T I Q L+ PH
Sbjct: 225 DTPDRKQVALFSATMPNA-IRRLSKQYLDNPAEVTVKSERRTNDNITQRFLLIPHRAKMD 283
Query: 617 ILHHLLKEHILGTPDY-KVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISE 675
+L+ +Y +IVFC T T + LR+ + + Q R+R +
Sbjct: 284 AFTRILE-----VINYDAIIVFCRTKHETEEVAETLRDRGFSAAAINGDIAQAQRERTVD 338
Query: 676 EFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLL 735
+ + + ILV +DV+ARG+D +T VV IP D E Y+HR+GRTGR G+ GE +L +
Sbjct: 339 QLKDGRLDILVATDVAARGLDVERITHVVNFDIPNDTESYVHRIGRTGRAGRSGEAILFV 398
Query: 736 APWEEYFLDDLKDLP---LDKLQLPHLN 760
P E L ++ + L+++ LP ++
Sbjct: 399 TPRERRMLRSIERVTNARLEEMDLPSVD 426
>gi|449279979|gb|EMC87401.1| ATP-dependent RNA helicase DDX18, partial [Columba livia]
Length = 544
Score = 208 bits (530), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 143/422 (33%), Positives = 233/422 (55%), Gaps = 30/422 (7%)
Query: 386 ISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKAT 445
+S T+K + G+ MT +Q ++ LEG+D + AKTG+GK++AFL+PA+E + K
Sbjct: 60 VSENTLKGINDMGFTHMTEIQHKSIKPLLEGRDILAAAKTGSGKTLAFLIPAVELIYK-- 117
Query: 446 SSSTTQLVP--PIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRL 503
+ +P V+IL PTRELA Q + L NH ++GG+ + ++L
Sbjct: 118 ----LKFMPRNGTGVIILSPTRELAMQTYG-VLKELMNHHVHTYGLIMGGSNRSAEAQKL 172
Query: 504 ESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLP 563
+ ++VATPGRLLDH++N G + L+ LV+DEAD +L++GF ++++ I+ LP
Sbjct: 173 -GNGINVIVATPGRLLDHMQNTPGFMYK--NLQCLVIDEADRILEVGFEEEMKQIIKLLP 229
Query: 564 RRRQSLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQI 617
+RRQ++LFSAT ++ + LK+E Y+ T ++Q +V P E F +
Sbjct: 230 KRRQTMLFSATQTRKVEDLAKISLKKEPLYVGVDDNKETATVDGLEQGYVVCPSEKRFLL 289
Query: 618 LHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEF 677
L LK++ K++VF S+ M Y LL + + V ++ ++ Q R +F
Sbjct: 290 LFTFLKKN----RKKKLMVFFSSCMSVKYHYELLNYIDLPVLAIHGKQKQTKRTTTFFQF 345
Query: 678 RASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEG--VLLL 735
++ IL+ +DV+ARG+D P+V +VQ P D ++YIHR+GRT R G G G +L+L
Sbjct: 346 CNAESGILLCTDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTAR-GINGRGHALLIL 404
Query: 736 APWEEYFLDDLKD--LPLDKLQLPHLN-PEIQLQMDNHMAK--IDNNVKEAAYHAWLGYY 790
P E FL LK +PL + + +IQ Q++ + K + + AY A++ Y
Sbjct: 405 RPEELGFLRYLKQARVPLSEFEFSWSKISDIQSQLEKLIEKNYFLHKSAQEAYKAYIRAY 464
Query: 791 NS 792
+S
Sbjct: 465 DS 466
>gi|159113843|ref|XP_001707147.1| ATP-dependent RNA helicase HAS1, putative [Giardia lamblia ATCC
50803]
gi|157435250|gb|EDO79473.1| ATP-dependent RNA helicase HAS1, putative [Giardia lamblia ATCC
50803]
Length = 547
Score = 208 bits (530), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 163/506 (32%), Positives = 250/506 (49%), Gaps = 55/506 (10%)
Query: 361 NGNGEKKEKREEEPILSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAV 420
+ G E + + I+++ F E +SP ++A+ A G+ MTR+QEA++ L G++
Sbjct: 11 SAEGGDTENAKYQEIMTETPFSETSLSPFLLEAVDAMGHKNMTRIQEASIPVILSGRNMT 70
Query: 421 VKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLK 480
KA TG+GKS+AFLLPAI+ + KA +L V++L PTRELA Q+ A L+
Sbjct: 71 AKAHTGSGKSLAFLLPAIDLIHKA----NMKLHHGTGVIVLTPTRELALQLYNVATQLIS 126
Query: 481 NHDGIGVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVL 540
+ I V +GGT + + L +++ATPGRL DH+ N G L ML+L
Sbjct: 127 ATN-ITVGLAIGGTSRQKEANHL-CKGASVVIATPGRLCDHLNNTPGFKTD--KLFMLIL 182
Query: 541 DEADHLLDLGFRKDVENIVDCL--PRRRQSLLFSATMPKELVLKREHTYIDTVGLGSVET 598
DEAD LL+ GF++++E I+ L P+ RQ FSATM + L+ H +D L + T
Sbjct: 183 DEADMLLEYGFQQELEAILRMLPGPKLRQVCFFSATMSDK-CLEVPHMEVDKETLIRINT 241
Query: 599 PVK--------IKQSCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLL 650
VK +Q ++ P E F +L+ +K D K+IVF S+ Y
Sbjct: 242 DVKSSAATRAHFEQGYIICPPEQRFLLLYTFMKRR----SDKKIIVFLSSRDSVEFYYEF 297
Query: 651 LREMKM-NVREMYSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIP 709
LR + M ++ + Q R +F ++ +L+ ++V+ARG+D P + V+Q P
Sbjct: 298 LRFIGMASILMLDGGMKQKQRMETYNKFCNAQSGVLLATNVAARGLDLPAIDYVIQFDPP 357
Query: 710 PDREQYIHRLGRT--GREGKEGEGVLLLAPWEEYFLDDLK---------DLPLDKLQLPH 758
E YIHR GR G GK+G G+L L E F+ LK + P DK+
Sbjct: 358 ESVESYIHRAGRACRGDTGKKGVGLLFLMSHETKFISFLKAHNVSLFEFEFPADKI---- 413
Query: 759 LNPEIQLQMDNHMAKIDNNVKEA--AYHAWLGYYNSIREIGRDKTTLVELANKFAQSIGL 816
+Q +M+N +A I ++A AY +++ Y S ++L +S GL
Sbjct: 414 --INVQAEMENLIATIYYLRRKAQNAYRSFISAYASHHLKKVFNVNKIDL-ECLGRSFGL 470
Query: 817 QRPPPLFRKTALKMGLKDIPGIRLRK 842
P + D+PGI L K
Sbjct: 471 TEVPRV-----------DVPGISLYK 485
>gi|167540072|ref|XP_001741531.1| ATP-dependent RNA helicase has1 [Entamoeba dispar SAW760]
gi|165893947|gb|EDR22062.1| ATP-dependent RNA helicase has1, putative [Entamoeba dispar SAW760]
Length = 518
Score = 208 bits (529), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 154/489 (31%), Positives = 260/489 (53%), Gaps = 27/489 (5%)
Query: 345 EEQVELIRKEISKNKLNGNGEKKEKRE--EEPILSQKRFDECGISPLTIKALTAAGYIQM 402
E+Q I++E ++NK E +EK + L+ + +S KAL AGY +M
Sbjct: 21 EKQESTIKEETNQNKSKSKEENEEKSKGTTSTFLTDIEYKSLNLSEEIQKALEEAGYTKM 80
Query: 403 TRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLVPPIYVLILC 462
T +Q ++ L GKD + KA+TG+GK++AFL+P +E +L T I I+
Sbjct: 81 TTIQARSIPLLLMGKDIMAKARTGSGKTLAFLIPIVE-ILNKIHFQTRNGTGAI---IIS 136
Query: 463 PTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHI 522
PTRELA Q E + + H ++GG+ K ++ L+ I+VATPGRLLDHI
Sbjct: 137 PTRELAIQ-TFEVLEKILAHSERTRTLIIGGSSKKKEEEALKKG-ASIVVATPGRLLDHI 194
Query: 523 ENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQSLLFSATMPKEL--- 579
N R LK LV+DEAD ++++GF +++ I++ LP+ RQ++LFSAT +++
Sbjct: 195 INTKCFIYR--NLKCLVIDEADRIMEVGFEEEMRQILNRLPKNRQTMLFSATQSEKVDDI 252
Query: 580 --VLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILHHLLKEHILGTPDYKVIVF 637
+ ++ I+ ++ T K++Q ++ + F++L+ L+++ + K IVF
Sbjct: 253 ANISLKQPVVINVESQSTISTSSKLEQGYVLVEAKDRFRLLYTFLRKN----KNKKTIVF 308
Query: 638 CSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDY 697
S+ LL + + V+ ++ + Q R ++ EF +K IL+T+D++ARG+D
Sbjct: 309 MSSCKAVKFYSDLLNYIDIPVKALHGQLDQDKRTKVFFEFCKAKEAILITTDIAARGLDI 368
Query: 698 PDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLAPWEEYFLDDLK--DLPLDKLQ 755
P V ++QV +P + YIHR+GRT R +G +L + P E L+ LK +PL + +
Sbjct: 369 PAVDWIIQVDLPDSPKDYIHRVGRTARADTKGRALLFVQPCEVRILEYLKGEKIPLTQYE 428
Query: 756 LPHLN-PEIQLQMDNHMAK--IDNNVKEAAYHAWLGYYNSIREIGRDKTTLVEL-ANKFA 811
+P IQ +++ + K N + Y A++ YNS R + +D + ++ A
Sbjct: 429 VPEKKIANIQRELEKLVEKNYYLNTEAKDGYKAYIMAYNS-RSL-KDVFNVNDIDIGGIA 486
Query: 812 QSIGLQRPP 820
S GL PP
Sbjct: 487 LSFGLTNPP 495
>gi|407797235|ref|ZP_11144181.1| DEAD/DEAH box helicase [Salimicrobium sp. MJ3]
gi|407018429|gb|EKE31155.1| DEAD/DEAH box helicase [Salimicrobium sp. MJ3]
Length = 491
Score = 208 bits (529), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 148/402 (36%), Positives = 219/402 (54%), Gaps = 26/402 (6%)
Query: 380 RFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIE 439
+F+ G+S +KAL G+ + T +QE T+ +EG D + +A+TGTGK+ AF +P IE
Sbjct: 3 KFNSLGLSDPILKALDHMGFEETTPIQEQTIPLGMEGHDVIGQAQTGTGKTAAFGIPMIE 62
Query: 440 AVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVD 499
V K V + L++ PTRELA Q+A E L KN G+ L + GG+ +
Sbjct: 63 KVDKQ--------VRGVQGLVIAPTRELAIQVAEELNRLGKNA-GVRSLPVYGGSNMERQ 113
Query: 500 QRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIV 559
R L+++ +I+VATPGRLLDHI K+ ++L + VLDEAD +L++GF +D+ +I+
Sbjct: 114 IRALKNN--EIVVATPGRLLDHIRRKT---IKLEQVHTSVLDEADEMLNMGFIEDIRDIL 168
Query: 560 DCLPRRRQSLLFSATMPKELVLKREHTYIDT---VGLGSVETPVKIKQSCLVAPHELH-F 615
LP RQ+LLFSATMPKE + T ++T V S E V V E H F
Sbjct: 169 KALPTERQTLLFSATMPKE-IRDIATTLMNTPKEVKTKSKEMTVSNIDQYYVEIAEKHKF 227
Query: 616 QILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISE 675
L LL H PD IVF T + L+ ++ Q R + +
Sbjct: 228 DALTRLLDIH---APDL-AIVFGRTKRRVDEVADALQVRGFRAEGIHGDLTQGKRMSVLK 283
Query: 676 EFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLL 735
+F+ + ILV +DV+ARG+D DVT V IP D E Y+HR+GRTGR G++GE + +
Sbjct: 284 KFKEGRIEILVATDVAARGLDISDVTHVYNFDIPQDPESYVHRIGRTGRAGRKGESISFV 343
Query: 736 APWEEYFLDDLKDLP---LDKLQLPHLNPEIQLQMDNHMAKI 774
P E+ L+ ++ L ++KL++P + Q D + K+
Sbjct: 344 TPREKDQLNLIEKLTKKKIEKLRVPSYKEAQKGQQDIAVTKL 385
>gi|350593265|ref|XP_001927639.3| PREDICTED: ATP-dependent RNA helicase DDX18 [Sus scrofa]
Length = 669
Score = 208 bits (529), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 144/418 (34%), Positives = 233/418 (55%), Gaps = 30/418 (7%)
Query: 390 TIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSST 449
T++A+ G+ MT +Q ++ LEG+D + AKTG+GK++AFL+PA+E ++K
Sbjct: 189 TLRAIKEMGFTNMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPAVELIVK------ 242
Query: 450 TQLVP--PIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDP 507
+ +P VLIL PTRELA Q L+ +H L ++GG+ + ++L ++
Sbjct: 243 LRFMPRNGTGVLILSPTRELAMQTFGVLKELMTHHVHTYGL-IMGGSNRSAEAQKL-ANG 300
Query: 508 CQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQ 567
I+VATPGRLLDH++N G + L+ LV+DEAD +LD+GF ++++ I+ LP RRQ
Sbjct: 301 INIVVATPGRLLDHMQNTPGFMYK--NLQCLVIDEADRILDVGFEEELKQIIKLLPTRRQ 358
Query: 568 SLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILHHL 621
++LFSAT ++ + LK+E Y+ + T ++Q +V P E F +L
Sbjct: 359 TMLFSATQTRKVEDLARISLKKEPLYVGVDDDKANATVDGLEQGYVVCPSEKRFLLLFTF 418
Query: 622 LKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEFRASK 681
LK++ K++VF S+ Y LL + + V ++ R+ Q R +F +
Sbjct: 419 LKKN----RKKKLMVFFSSCKSVKYHYELLNYIDLPVLAIHGRQKQNKRTTTFFQFCNAD 474
Query: 682 RLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEG--VLLLAPWE 739
IL+ +DV+ARG+D P+V +VQ P D ++YIHR+GRT R G G G +L+L P E
Sbjct: 475 SGILLCTDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTAR-GLNGRGHALLILRPEE 533
Query: 740 EYFLDDLKD--LPLDKLQLPHLN-PEIQLQMDNHMAK--IDNNVKEAAYHAWLGYYNS 792
FL LK +PL + + +IQ Q++ + K + + AY +++ Y+S
Sbjct: 534 LGFLRYLKQSKVPLSEFEFSWSKISDIQSQLEKLIEKNYFLHKSAQEAYKSYIRAYDS 591
>gi|329923450|ref|ZP_08278932.1| DEAD-box ATP-dependent RNA helicase CshA [Paenibacillus sp. HGF5]
gi|328941342|gb|EGG37636.1| DEAD-box ATP-dependent RNA helicase CshA [Paenibacillus sp. HGF5]
Length = 538
Score = 208 bits (529), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 136/372 (36%), Positives = 202/372 (54%), Gaps = 24/372 (6%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F + GI ++ L G + T VQ+ ++ L+GKD + +AKTGTGK++AF+LP ++
Sbjct: 14 FQQLGIDEQRVRKLKEQGITEPTPVQQESIPLLLQGKDVIARAKTGTGKTLAFMLPILQH 73
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNH-DGIGVLTLVGGTRFKVD 499
+ + P LI+ PTRELA QI EA L DGI +L + GG +
Sbjct: 74 I------DPKRAYP--QALIIAPTRELALQITEEAKKLTAGEPDGIKILAVYGGQDVEKQ 125
Query: 500 QRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIV 559
R+LE Q+++ TPGRLLDH+ + + L G+K LVLDEAD +L +GF +VE ++
Sbjct: 126 LRKLEGG-RQLIIGTPGRLLDHLRRGT---LELGGVKQLVLDEADQMLHMGFLDEVEALI 181
Query: 560 DCLPRRRQSLLFSATMP---KELVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQ 616
LP RRQ++LFSATMP K+L + +D V G+ P++ Q +V + Q
Sbjct: 182 HALPYRRQTMLFSATMPAGVKQLAGNYMNQPVDIVIKGASPIPLEQIQQVVVECTDRSKQ 241
Query: 617 -ILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISE 675
L +++EH P + I+FC T + L L E++ Q R+ + +
Sbjct: 242 DALRAMIEEH---NP-FLAIIFCRTKRRATTLNEALLAHGYQSDELHGDLSQAKREAVMK 297
Query: 676 EFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLL 735
FR +K +LV +DV+ARG+D VT V +P D E YIHR+GRTGR G G +
Sbjct: 298 RFREAKLQLLVATDVAARGLDVEGVTHVFNYDMPHDVESYIHRIGRTGRAGGSGMAITFA 357
Query: 736 APWEEYFLDDLK 747
A + L+DL+
Sbjct: 358 AGKD---LNDLQ 366
>gi|1498229|emb|CAA67295.1| RNA helicase [Homo sapiens]
Length = 610
Score = 208 bits (529), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 153/451 (33%), Positives = 244/451 (54%), Gaps = 41/451 (9%)
Query: 390 TIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSST 449
T+KA+ G+ MT +Q ++ LEG+D + AKTG+GK++AFL+PA+E ++K
Sbjct: 130 TLKAIKEMGFTNMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPAVELIVKL----- 184
Query: 450 TQLVP--PIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDP 507
+ +P VLIL PTRELA Q L+ +H L ++GG+ + ++L +
Sbjct: 185 -RFMPRNGTGVLILSPTRELAMQTFGVLKELMTHHVHTYGL-IMGGSNRSAEAQKL-GNG 241
Query: 508 CQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQ 567
I+VATPGRLLDH++N G + L+ LV+DEAD +LD+GF ++++ I+ LP RRQ
Sbjct: 242 INIIVATPGRLLDHMQNTPGFMYK--NLQCLVIDEADRILDVGFEEELKQIIKLLPTRRQ 299
Query: 568 SLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILHHL 621
++LFSAT ++ + LK+E Y+ + T ++Q +V P E F +L
Sbjct: 300 TMLFSATQTRKVEDLARISLKKEPLYVGVDDDKANATVDGLEQGYVVCPSEKRFLLLFTF 359
Query: 622 LKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEFRASK 681
LK++ K++VF S+ M Y LL + + V ++ ++ Q R +F +
Sbjct: 360 LKKN----RKKKLMVFFSSCMSVKYHYELLNYIDLPVLAIHGKQKQNKRTTTFFQFCNAD 415
Query: 682 RLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEG--VLLLAPWE 739
L+ +DV+ARG+D P+V +VQ P D ++YIHR+GRT R G G G +L+L P E
Sbjct: 416 SGTLLCTDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTAR-GLNGRGHALLILRPEE 474
Query: 740 EYFLDDLKD--LPLDKLQLPHLN-PEIQLQMDNHMAKIDNNVKEAAYHAWLGYYNSIREI 796
FL LK +PL + +IQ Q++ + K + + ++A A+ Y IR
Sbjct: 475 LGFLRYLKQSKVPLSEFDFSWSKISDIQSQLEKLIEK-NYFLHKSAQEAYKSY---IR-- 528
Query: 797 GRDKTTLVELAN-------KFAQSIGLQRPP 820
D +L ++ N + A S G + PP
Sbjct: 529 AYDSHSLKQIFNVNNLNLPQVALSFGFKVPP 559
>gi|373451351|ref|ZP_09543276.1| hypothetical protein HMPREF0984_00318 [Eubacterium sp. 3_1_31]
gi|371968623|gb|EHO86078.1| hypothetical protein HMPREF0984_00318 [Eubacterium sp. 3_1_31]
Length = 580
Score = 208 bits (529), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 126/361 (34%), Positives = 196/361 (54%), Gaps = 21/361 (5%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F+E IS +KA+ GY T +Q ++ LEGKD + ++ TGTGK+ AF +PAIE
Sbjct: 4 FNELPISSEIMKAVEEMGYENATDIQAQSIPCILEGKDVLGRSNTGTGKTAAFGIPAIEK 63
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
V+ LI+CPTREL +Q+A E K +G+ ++ + GG Q
Sbjct: 64 VIPGNKFPNA--------LIICPTRELVTQVATELRKFSKYKEGVKIVPIYGGQPID-RQ 114
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
+L C I+V TPGR++DH+ ++ ++L + M++LDEAD +L++GF++D+E I+
Sbjct: 115 IQLLKRGCGIVVGTPGRIMDHLNRRT---LKLQDVNMIILDEADEMLNMGFKEDIEEILS 171
Query: 561 CLP--RRRQSLLFSATMPKELVLKREHTYIDTVGL---GSVETPVKIKQSCLVAPHELHF 615
+P Q++LFSAT P+ ++ E D V + S T ++Q AP
Sbjct: 172 MMPADNEHQTILFSATWPQAILKITEQFQKDPVRVEIKSSQRTIDTVEQIYYEAPRGKKA 231
Query: 616 QILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISE 675
L LL + PD ++FC+T + L L + + ++ Q +R R+ E
Sbjct: 232 NALRVLLNHY---DPDL-CMIFCNTKKMVDELCEELNKHDIKATSLHGDMKQEFRSRVME 287
Query: 676 EFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLL 735
+FR IL+ +DV+ARG+D D+ VV IP D E YIHR+GRTGR GK+G + L+
Sbjct: 288 QFRNGTSPILIATDVAARGIDVDDIDLVVNFDIPQDMEYYIHRVGRTGRAGKKGLAITLI 347
Query: 736 A 736
+
Sbjct: 348 S 348
>gi|409078086|gb|EKM78450.1| hypothetical protein AGABI1DRAFT_121530 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 832
Score = 208 bits (529), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 151/469 (32%), Positives = 245/469 (52%), Gaps = 37/469 (7%)
Query: 374 PILSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAF 433
P K F + IS T + L +++MT +Q ++ L+GKD + A+TG+GK++AF
Sbjct: 53 PPADLKLFADLPISENTKRGLKKGFFVEMTDIQAKSIPVSLKGKDVLGAARTGSGKTLAF 112
Query: 434 LLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGG 493
L+P +EA+ + + V + LI+ PTRELA QI E + + + ++GG
Sbjct: 113 LIPVLEALYRRKWGA----VDGLGALIISPTRELAVQIF-EVLRSIGGYHTFSAGLVIGG 167
Query: 494 TRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRK 553
K ++ RL ILVATPGRLL H++ G L+MLVLDEAD +LD+GF++
Sbjct: 168 KNLKDEKDRLSR--MNILVATPGRLLQHMDQTFGFDAD--NLQMLVLDEADRILDMGFQR 223
Query: 554 DVENIVDCLPRRRQSLLFSATMPKE------LVLKREHTY-IDTVG--LGSVETPVKIKQ 604
+ ++ LP+ RQ+LLFSAT + L LK + I + G G P ++Q
Sbjct: 224 TLSALLSHLPKSRQTLLFSATQTQSVNDLARLSLKEPVSIGISSPGEATGDTYIPATLEQ 283
Query: 605 SCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVR--EMY 662
+V+ + IL +K H+ K +VF S +Y M + ++
Sbjct: 284 HYVVSDLDKKLDILWSFIKTHL----QCKTLVFMSACKQVRFVYETFCRMHPGIPLIHLH 339
Query: 663 SRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRT 722
++ Q R + +F +K +L +D++ARG+D+P V VVQ+ P D E YIHR+GRT
Sbjct: 340 GKQKQSARLTMFNKFATTKHAVLFATDIAARGLDFPSVDWVVQLDAPEDVETYIHRVGRT 399
Query: 723 GREGKEGEGVLLLAPWEEYFLD---DLKDLPLDKLQLPHLNPEIQLQMDNHMAKI---DN 776
R +G+G+L+L P EE + + K L ++K++ + P ++N + K+ D
Sbjct: 400 ARYESKGKGLLVLCPSEEEGMTMALETKGLQVNKIK---IRPSKTQNIENQLQKLAFQDP 456
Query: 777 NVKEAAYHAWLGYYNSIREIGRDKTT--LVEL-ANKFAQSIGLQRPPPL 822
+K A A++ Y SI + + K+ + EL +FA+S+GL P +
Sbjct: 457 EIKYLAQRAFVSYLRSIY-LQKHKSVFKIDELPVERFAESLGLPGAPKI 504
>gi|156836950|ref|XP_001642513.1| hypothetical protein Kpol_340p2 [Vanderwaltozyma polyspora DSM
70294]
gi|156113052|gb|EDO14655.1| hypothetical protein Kpol_340p2 [Vanderwaltozyma polyspora DSM
70294]
Length = 670
Score = 208 bits (529), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 138/404 (34%), Positives = 222/404 (54%), Gaps = 31/404 (7%)
Query: 367 KEKREEEPILSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEG--KDAVVKAK 424
K + E E L Q + DE I + +++ G+ +T VQ+ T+ LE +D + +AK
Sbjct: 104 KLENEVEVTLDQLK-DENIIDTMLHLSISRMGFPNLTAVQQKTIKPILENEDRDVIARAK 162
Query: 425 TGTGKSIAFLLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDG 484
TGTGK+ AFL+P E +++ S + ++L PTR+LA QI E + N+
Sbjct: 163 TGTGKTFAFLIPLFEHLIRTRRESPDM----VKAVVLAPTRDLALQIEQEVHKIHSNNYA 218
Query: 485 I---GVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLD 541
+ G +++VGGT+F +L+ I++ATPGR + +E + + K VLD
Sbjct: 219 LKKFGCMSVVGGTKFGQSLFQLKKTRPNIIIATPGRFIATVEAVGAEYFKHVDFK--VLD 276
Query: 542 EADHLLDLGFRKDVENIVDCL-------PRRRQSLLFSATMPK-------ELVLKREHTY 587
EAD LL++GF+ D+E I L ++LLFSAT+ + +++ K E +
Sbjct: 277 EADRLLEIGFKDDLEYISTSLNGLNDVGKDHIRTLLFSATLDEKVQTLADDVMNKSECLF 336
Query: 588 IDTVGLGSVETPVKIKQSCLVAPH--ELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTS 645
+DTV E+ KI+QS +V+ + E + ++ HLLK+ P+YK I+F T T
Sbjct: 337 LDTVDKNEPESHEKIEQSLVVSQNFAESTYAVIDHLLKQ-TKNVPNYKAILFTPTIKATK 395
Query: 646 LLYLLLRE--MKMNVREMYSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSV 703
L LL++ + V E + + Q R RI F+ + +LV +DV ARGMD+P+VT V
Sbjct: 396 FLSNLLKKSLHRYPVYEFHGKIDQAKRTRIVGSFKGAPAGLLVCTDVGARGMDFPNVTEV 455
Query: 704 VQVGIPPDREQYIHRLGRTGREGKEGEGVLLLAPWEEYFLDDLK 747
+Q+G+P + Y+HR+GRT R GKEG V+ L+ E +++L+
Sbjct: 456 LQLGVPSELSNYVHRIGRTARGGKEGASVIFLSDSELGLIENLE 499
>gi|342181249|emb|CCC90728.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 815
Score = 208 bits (529), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 156/506 (30%), Positives = 254/506 (50%), Gaps = 34/506 (6%)
Query: 347 QVELIRKEISKNKLNGNGEKKEKREEEPILSQKRFDECGISPLTIKALTAAGYIQMTRVQ 406
+VE +RK+ + + + + +++ + +FD+ +S T L GY ++T +Q
Sbjct: 30 EVESLRKQREELRATLDDADESGKQQVGHSAYTQFDQLPLSQRTQLGLERGGYKRLTPIQ 89
Query: 407 EATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLVPPIYV--LILCPT 464
L L G D + A+TG+GK++ F++P +E + Q P + V L+L PT
Sbjct: 90 SDALHLALAGYDVLGAARTGSGKTLCFIVPLLELLY------VEQWEPDMGVGALVLTPT 143
Query: 465 RELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIEN 524
RELA QI + + L+ + L GG + +++RL + I+V TPGR+L H+E+
Sbjct: 144 RELALQIF-KVLQLVGYKHVMSAALLTGGRDVQEERKRLSA--ISIIVGTPGRVLHHLED 200
Query: 525 KSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQSLLFSATMPKELVLK-- 582
+GL L+MLV+DEAD LLD+GFR+ + I+ LP RQ+LLFSAT ++ +
Sbjct: 201 DAGLVTD--NLQMLVMDEADRLLDMGFREALNGILSQLPSERQTLLFSATQTTDVQMLSQ 258
Query: 583 ---REHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCS 639
R Y+ + TP + Q+ +V + F IL LK H P+ K +VF S
Sbjct: 259 MSLRNQRYVTAHSETAAPTPSTLCQNFIVVELQHKFDILLLFLKRH----PNDKFVVFVS 314
Query: 640 TGMVTSLLYL----LLREMKMNVREMYSRKPQLYRDRISEEFRASKRLILVTSDVSARGM 695
T +YL +L++M++ + S+ Q R+ + F K +L +DV+ARG+
Sbjct: 315 TCNQVRYMYLAFAKILKKMRLPCMCLTSKMKQFRREEVFLTFCRCKNAVLFCTDVAARGL 374
Query: 696 DYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLAPWEEYFLDDL--KDLPLDK 753
D+P + VQ P + YIHR GRT R G G +L L P E L L K +PL +
Sbjct: 375 DFPLIHWSVQFDCPDSAQTYIHRAGRTARAGARGVSLLFLTPRETPMLSFLAHKHIPLRE 434
Query: 754 LQL-PHLNPEIQLQMDNHMAKIDNNVKEAAYHAWLGYYNSIREIGRDKTTLVELAN--KF 810
+ + P + E + + +A + +K A A++ Y S+ V + F
Sbjct: 435 IAVRPSMLRESK---EIFVALVVQGLKYEAQKAFIAYLRSVYFAANKLVFDVRSIDVVPF 491
Query: 811 AQSIGLQRPPPLFRKTALKMGLKDIP 836
A S+GL + P + L+ G K++P
Sbjct: 492 AHSLGLLKVPDMSELGNLQRGAKNLP 517
>gi|242219333|ref|XP_002475447.1| predicted protein [Postia placenta Mad-698-R]
gi|220725348|gb|EED79339.1| predicted protein [Postia placenta Mad-698-R]
Length = 806
Score = 208 bits (529), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 147/457 (32%), Positives = 238/457 (52%), Gaps = 30/457 (6%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
K F + +S LT + L A ++ MT +Q +L L+GKD + A+TG+GK++AFL+P +
Sbjct: 54 KSFADLPVSGLTKRGLKKAFFVDMTDIQAKSLPVSLKGKDVLGAARTGSGKTLAFLVPVL 113
Query: 439 EAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
E + + L LI+ PTRELA QI + + + + ++GG K
Sbjct: 114 EILYRRKWGPQDGL----GALIISPTRELAVQIF-DVLRSIGGYHSFSAGLVIGGKNVKD 168
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
++ RL ILVATPGRLL H++ G L+MLVLDEAD +LD+GF++ + +
Sbjct: 169 ERERLSR--MNILVATPGRLLQHMDQTIGFECD--NLQMLVLDEADRILDMGFQRTLSAL 224
Query: 559 VDCLPRRRQSLLFSATMPKELVLKREHTYIDTVGLG------SVETPVKIKQSCLVAPHE 612
+ LP+ RQ+LLFSAT + + D V +G + P ++Q ++ +
Sbjct: 225 LSHLPKARQTLLFSATQTDSVSDLARLSLKDPVYIGVHDSDNASAMPKSLEQHYVLCTLD 284
Query: 613 LHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNV--REMYSRKPQLYR 670
+L LK H+ KV+VF S+ ++ R + V ++ ++ Q+ R
Sbjct: 285 QKLDLLWSFLKSHL----QSKVLVFLSSCKQVRFVFETFRRLHPGVPLLHLHGKQKQMTR 340
Query: 671 DRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGE 730
+ F K +L +D++ARG+D+P V V+QV P D E YIHR+GRT R G+
Sbjct: 341 LATFQRFTGMKHAVLFATDIAARGLDFPAVNWVLQVDAPEDAETYIHRVGRTARYESAGK 400
Query: 731 GVLLLAPWEEYFLDDL---KDLPLDKLQL-PHLNPEIQLQMDNHMAKIDNNVKEAAYHAW 786
G+L L P EE + K + +K+++ I+ Q+ N +A D +K A A+
Sbjct: 401 GLLFLMPSEEEGMTQALAKKSITAEKIKIRASKTQSIENQLQN-LAFQDPEIKYLAQRAF 459
Query: 787 LGYYNSIREIGRDKTT--LVEL-ANKFAQSIGLQRPP 820
+ Y S+ + +DK+ + EL A +FA+++GL P
Sbjct: 460 VSYLRSV-HLQKDKSIFKVAELPAERFAEALGLPGMP 495
>gi|448528823|ref|XP_003869760.1| Hca4 protein [Candida orthopsilosis Co 90-125]
gi|380354114|emb|CCG23627.1| Hca4 protein [Candida orthopsilosis]
Length = 755
Score = 208 bits (529), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 141/465 (30%), Positives = 240/465 (51%), Gaps = 38/465 (8%)
Query: 377 SQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLP 436
+ ++F + I+ T++ L + +I +T +Q+ T+ L+G D + A+TG+GK++AFL+P
Sbjct: 46 AMQQFSDLPITQNTLRGLKESAFISLTDIQKKTIPIALKGHDLMGTARTGSGKTLAFLIP 105
Query: 437 AIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRF 496
IE ++K + L LI+ PTRELA QI E +A + ++ + GG
Sbjct: 106 VIELLIKNDITEYDGLA----ALIVSPTRELAVQIF-EVLAKIGKYNSFSAGLVTGGKDV 160
Query: 497 KVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVE 556
+ ++ R+ ILV TPGR+ H+ G+ L++LVLDEAD LD+GF+K ++
Sbjct: 161 QYEKERISR--MNILVGTPGRISQHLNEAVGMETS--NLQVLVLDEADRCLDMGFKKQID 216
Query: 557 NIVDCLPRRRQSLLFSATMPKEL--VLKREHTYIDTVGLGSVE----TPVKIKQSCLVAP 610
NI+ LP RQ+LLFSAT + + + T +G S + P + Q + P
Sbjct: 217 NIISHLPPTRQTLLFSATTTDSVRDLARLSLTNPKRIGTSSDQDVSAIPESLDQYYVRVP 276
Query: 611 HELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK--MNVREMYSRKPQL 668
E +L +K H+ K++VF S+ Y R ++ +++ ++Y R Q
Sbjct: 277 LEEKLDVLWSFIKSHLKS----KILVFFSSSKQVQYTYESFRTLQPGISLLKLYGRNKQT 332
Query: 669 YRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKE 728
R + +F ++ + L +D+ ARG+D+P + V+QV P D Y+HR+GR+ R G++
Sbjct: 333 SRLETTMKFAQAQHVCLFATDIVARGLDFPAIDWVIQVDCPEDVATYVHRVGRSARFGRQ 392
Query: 729 GEGVLLLAPWEEY-FLDDLKD-------LPLDKLQLPHLNPEIQLQMDNHMAKIDNNVKE 780
G+ +L+L P EE FL LK + + + + P++Q + D +K
Sbjct: 393 GKSLLMLTPTEEEGFLQRLKAQNIEPKLMNIKQKSKKSIRPQLQ-----SLCFKDPVMKN 447
Query: 781 AAYHAWLGYYNSIREIGRDKTTL-VEL--ANKFAQSIGLQRPPPL 822
A++ Y+ S+ I +DK VE A +A S+GL P +
Sbjct: 448 LGQRAFIAYFKSVH-IQKDKEVFNVEALPAEAYASSLGLPGAPKI 491
>gi|398392601|ref|XP_003849760.1| RNA-dependent ATPase [Zymoseptoria tritici IPO323]
gi|339469637|gb|EGP84736.1| hypothetical protein MYCGRDRAFT_101180 [Zymoseptoria tritici
IPO323]
Length = 811
Score = 208 bits (529), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 150/463 (32%), Positives = 241/463 (52%), Gaps = 45/463 (9%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F + +S T L ++ + +T +Q + L+GKD + AKTG+GK++AFL+P +E
Sbjct: 50 FTDLPLSDPTRAGLKSSAFSTLTDIQAKAIPLALKGKDILGAAKTGSGKTLAFLIPVLEN 109
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVL----TLVGGTRF 496
+ +A + +I+ PTRELA QI +L+ G G L ++GG
Sbjct: 110 LYRAQCVGGD---AGLGAMIITPTRELAIQI----FEVLRKVGGKGHLFAAGLVIGGKSL 162
Query: 497 KVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVE 556
+ +Q L I+V TPGRLL H+ + +V L+MLVLDEAD +LD+GF++DV+
Sbjct: 163 REEQDALAR--MNIVVGTPGRLLQHLSQTAMFNVD--NLRMLVLDEADRILDMGFQRDVD 218
Query: 557 NIVDCLPRRRQSLLFSATMPKELV-LKR----EHTYIDTVGLGSVETPVKIKQSCLVAPH 611
IVD LP+ RQ++LFSAT K++ L R E Y+ TP ++Q+ ++ P
Sbjct: 219 AIVDYLPKERQTMLFSATQTKKVGDLARLSLNEPEYVSVHEAAQSATPKTLQQNYVITPL 278
Query: 612 ELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK--MNVREMYSRKPQLY 669
+ L ++ K+++F S+G +Y R M+ + + ++ R+ Q
Sbjct: 279 QDKLDTLWSFIQ----SAKKSKLLIFLSSGKQVRFVYESFRHMQPGIPLLHLHGRQKQTA 334
Query: 670 RDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEG 729
R I+++F A+K L +DV ARG+D+P V VVQV P D + YIHR+GRT R ++G
Sbjct: 335 RLDITQKFSAAKNSCLFATDVVARGLDFPAVDWVVQVDCPEDADTYIHRVGRTARYERDG 394
Query: 730 EGVLLLAPWEEYFL---DDLKDLPLDKLQLPHLNPEIQLQMDNHMAKI---DNNVKEAAY 783
VL L P EE + + K +P++++ ++ + Q + N + + D +K
Sbjct: 395 RAVLFLDPSEEEGMLGRLEQKKVPIERI---NVKAKKQTSIKNQLQSMCFKDPQLKYLGQ 451
Query: 784 HAWLGYYNSI-----REIGR-DKTTLVELANKFAQSIGLQRPP 820
+ Y S+ +EI + DK L E FA S+GL P
Sbjct: 452 KCFASYVRSLHIQKDKEIFKLDKYPLEE----FAASLGLPGAP 490
>gi|238009564|gb|ACR35817.1| unknown [Zea mays]
Length = 215
Score = 208 bits (529), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 100/193 (51%), Positives = 142/193 (73%), Gaps = 6/193 (3%)
Query: 461 LCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLD 520
+CPTRELA+Q+AAEA LLK H +GV ++GGTR +QR ++++PCQILVATPGRL D
Sbjct: 1 MCPTRELANQLAAEARKLLKYHRSLGVQVVIGGTRLPQEQRSMQANPCQILVATPGRLKD 60
Query: 521 HIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQSLLFSATMPKE-- 578
H+EN G S R+ G+K+LVLDEAD LLD+GFR+D+E I+ +P+ RQ+LLFSAT+ +E
Sbjct: 61 HLENTPGFSTRIRGVKVLVLDEADRLLDMGFRRDIEKIITFIPKDRQTLLFSATVSEEIH 120
Query: 579 ----LVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILHHLLKEHILGTPDYKV 634
L +++++ +I+ V G ET ++ Q+ +VAP LH IL+ +LK+H+ +YKV
Sbjct: 121 QISHLAMRKDYDFINAVQEGDEETHAQVNQTYMVAPLGLHLPILYDVLKKHVAEDAEYKV 180
Query: 635 IVFCSTGMVTSLL 647
IVFC+T MVT L+
Sbjct: 181 IVFCTTAMVTRLV 193
>gi|169632326|ref|YP_001706062.1| ATP-dependent RNA helicase [Acinetobacter baumannii SDF]
gi|169151118|emb|CAO99784.1| putative ATP-dependent RNA helicase [Acinetobacter baumannii]
Length = 619
Score = 208 bits (529), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 128/379 (33%), Positives = 202/379 (53%), Gaps = 19/379 (5%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
K F E + +AL G+ T VQE ++ A LEGKD +V ++TG+GK+ AFLLP +
Sbjct: 7 KTFAEFSLHETLQQALEGLGFTNPTPVQEQSIPAALEGKDLLVSSQTGSGKTAAFLLPTL 66
Query: 439 EAVLKATS----SSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGT 494
+ + + V +L+LCPTRELA Q++ +AIA +++ G+ + ++GG
Sbjct: 67 HNLAGQDTFVPFKERMKAVTQPSILVLCPTRELAQQVSQDAIAFVRHMKGVRIAAIMGGM 126
Query: 495 RFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKD 554
F ++L+ Q++VATPGRLLD + + ++L + L++DEAD +LDLGF +D
Sbjct: 127 PFGKQIQQLKG--AQVVVATPGRLLDLVNRRQ---LKLDKVDALIVDEADRMLDLGFSED 181
Query: 555 VENIVDCLPRRRQSLLFSATMPKELVLKREHTYIDTVGLGSVETPVKIKQSCLVAPH--- 611
+E I D R Q+L+FSAT ++ E + + ++ET H
Sbjct: 182 LEAISDLAVNRGQTLMFSATFADRIIRLAERMMNEPERI-AIETGHSTNTDITQTLHWTD 240
Query: 612 --ELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLY 669
E ++L H L + L + +VF ST T +L L E +V ++ PQ
Sbjct: 241 GFEHKKKLLTHWLADETLD----QAVVFASTQEDTDMLAEELAEAGHSVVALHGAMPQTA 296
Query: 670 RDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEG 729
R+R R + ILV +DV+ARG+D P ++ V+ G+P E Y+HR+GRTGR G+ G
Sbjct: 297 RNRRLRSIREGRAKILVATDVAARGLDVPTISHVINFGLPMKHEDYVHRIGRTGRAGRTG 356
Query: 730 EGVLLLAPWEEYFLDDLKD 748
+ + L E + L+D
Sbjct: 357 QAITLATYRERGKIRALED 375
>gi|26344732|dbj|BAC36015.1| unnamed protein product [Mus musculus]
Length = 660
Score = 208 bits (529), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 147/418 (35%), Positives = 228/418 (54%), Gaps = 30/418 (7%)
Query: 390 TIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSST 449
T+KA+ G+ +MT +Q ++ LEG+D + AKTG+GK++AFL+P IE ++K
Sbjct: 180 TLKAIEEMGFKRMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPVIELIVK------ 233
Query: 450 TQLVP--PIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDP 507
+ +P VLIL PTRELA Q L+ +H L + G R Q+ L
Sbjct: 234 LKFMPRNGTGVLILSPTRELAMQTFGVLKELMTHHVHTYGLIMGGSNRSAEVQKLLNG-- 291
Query: 508 CQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQ 567
I+VATPGRLLDH++N G + L+ LV+DEAD +LD+GF ++++ I+ LP RRQ
Sbjct: 292 INIIVATPGRLLDHMQNTPGFMYK--NLQCLVIDEADRILDVGFEEELKQIIKLLPARRQ 349
Query: 568 SLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILHHL 621
++LFSAT ++ + LK+E Y+ V T ++Q +V P E F +L
Sbjct: 350 TMLFSATQTRKVEDLARISLKKEPLYVGVDDDKEVATVDGLEQGYVVCPSEKRFLLLFTF 409
Query: 622 LKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEFRASK 681
LK++ KV+VF S+ M Y LL + + V ++ ++ Q R +F +
Sbjct: 410 LKKN----RKKKVMVFFSSCMSVKYHYELLNYIDLPVLAIHGKQKQNKRTTTFFQFCNAD 465
Query: 682 RLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEG--VLLLAPWE 739
IL+ +DV+ARG+D P+V +VQ P D ++ IHR+GRT R G G G +L+L P E
Sbjct: 466 SGILLCTDVAARGLDIPEVDWIVQYDPPDDPKECIHRVGRTAR-GLNGRGHALLILRPEE 524
Query: 740 EYFLDDLKD--LPLDKLQLPHLN-PEIQLQMDNHMAK--IDNNVKEAAYHAWLGYYNS 792
FL LK +PL++ +IQ Q++ + K + + AY +++ Y+S
Sbjct: 525 LGFLRYLKQSKVPLNQFDFSWSKVSDIQSQLEKLIEKNYFLHKSAQEAYKSYIRAYDS 582
>gi|255324480|ref|ZP_05365597.1| cold-shock DEAD box protein A [Corynebacterium tuberculostearicum
SK141]
gi|255298386|gb|EET77686.1| cold-shock DEAD box protein A [Corynebacterium tuberculostearicum
SK141]
Length = 619
Score = 208 bits (529), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 132/388 (34%), Positives = 207/388 (53%), Gaps = 26/388 (6%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F G+ ++A+ G+ + + +QE T+ +EG+D V A+TGTGK+ AF LP +
Sbjct: 57 FAHLGLPEKILEAVAKVGFTKPSPIQEETIPILMEGRDVVGLAQTGTGKTAAFALPVL-- 114
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
S T+ P L+L PTRELA Q+A + ++ G+ VL + GG + +
Sbjct: 115 -----SQIDTKARHP-QALVLAPTRELALQVADSFQSFAESLKGVEVLPIYGGQAYGIQL 168
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
L Q++V TPGR++DH+E S + L L+ LVLDEAD +L++GF++DVE I++
Sbjct: 169 SGLRRG-AQVIVGTPGRVIDHLEKGS---LDLSQLQFLVLDEADEMLNMGFQEDVERILE 224
Query: 561 CLPRRRQSLLFSATMPKELVLKREHTYIDTVGLGSVE----TPVKIKQSCLVAPHELHFQ 616
P R+Q LFSATMP + + Y+D +V+ T I Q L+ PH
Sbjct: 225 DTPDRKQVALFSATMPNA-IRRLSKQYLDNPAEVTVKSERRTNDNITQRFLLIPHRAKMD 283
Query: 617 ILHHLLKEHILGTPDY-KVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISE 675
+L+ +Y +IVFC T T + LR+ + + Q R+R +
Sbjct: 284 AFTRILE-----VINYDAIIVFCRTKHETEEVAETLRDRGFSAAAINGDIAQAQRERTVD 338
Query: 676 EFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLL 735
+ + + ILV +DV+ARG+D +T VV IP D E Y+HR+GRTGR G+ GE +L +
Sbjct: 339 QLKDGRLDILVATDVAARGLDVERITHVVNFDIPNDTESYVHRIGRTGRAGRSGEAILFV 398
Query: 736 APWEEYFLDDLKDLP---LDKLQLPHLN 760
P E L ++ + L+++ LP ++
Sbjct: 399 TPRERRMLRSIERVTNARLEEMDLPSVD 426
>gi|85085468|ref|XP_957516.1| hypothetical protein NCU04439 [Neurospora crassa OR74A]
gi|74696212|sp|Q7RZ35.1|DBP4_NEUCR RecName: Full=ATP-dependent RNA helicase dbp-4
gi|28918608|gb|EAA28280.1| hypothetical protein NCU04439 [Neurospora crassa OR74A]
gi|40882181|emb|CAF06007.1| probable putative RNA helicase HCA4 [Neurospora crassa]
Length = 823
Score = 208 bits (529), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 129/368 (35%), Positives = 202/368 (54%), Gaps = 20/368 (5%)
Query: 380 RFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIE 439
+F + + T L A+ + +T VQ A + L+G+D + A+TG+GK++AFL+P +E
Sbjct: 58 KFSDLPLCEPTASGLRASHFEVLTDVQRAAIPLALKGQDILGAARTGSGKTLAFLVPVLE 117
Query: 440 AVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVD 499
+ +A + L LI+ PTRELA QI + +NH L ++GG K +
Sbjct: 118 KLYRARWTEYDGL----GALIISPTRELAVQIFEVLRKIGRNHSFSAGL-VIGGKSLKEE 172
Query: 500 QRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIV 559
RL ILV TPGR+L H++ +G V L+MLVLDEAD ++D+GF++ V+ +V
Sbjct: 173 AERLGR--MNILVCTPGRMLQHLDQTAGFDVD--NLQMLVLDEADRIMDMGFQQAVDALV 228
Query: 560 DCLPRRRQSLLFSATMPKEL-----VLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELH 614
+ LP+ RQ+LLFSAT K + + ++ Y+ + TPV ++Q +V P
Sbjct: 229 EHLPKSRQTLLFSATQSKRVSDLARLSLKDPEYVSVHEAAASATPVGLQQHYIVTPLPEK 288
Query: 615 FQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK--MNVREMYSRKPQLYRDR 672
L L+ ++ K+IVF S+G +Y + M+ + + ++ R+ Q+ R
Sbjct: 289 LDTLWGFLRTNLKS----KIIVFMSSGKQVRFVYESFKRMQPGIPLLHLHGRQKQIARLE 344
Query: 673 ISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGV 732
I+ F ++K L +DV ARG+D+P V V+QV P D + YIHR+GRT R +G V
Sbjct: 345 ITNRFTSAKYSCLFATDVVARGVDFPAVDWVIQVDCPEDADTYIHRVGRTARYESKGRAV 404
Query: 733 LLLAPWEE 740
L L P EE
Sbjct: 405 LFLDPSEE 412
>gi|348590558|ref|YP_004875020.1| ATP-dependent RNA helicase [Taylorella asinigenitalis MCE3]
gi|347974462|gb|AEP36997.1| ATP-dependent RNA helicase [Taylorella asinigenitalis MCE3]
Length = 444
Score = 208 bits (529), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 129/381 (33%), Positives = 209/381 (54%), Gaps = 20/381 (5%)
Query: 376 LSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLL 435
+ +K F E G ++ ++ GY+ T +Q + LEG+D + A+TGTGK+ AF L
Sbjct: 1 MDKKEFKEFGFHSKILENISNTGYLHATPIQALSFPPILEGRDVMGAAQTGTGKTAAFTL 60
Query: 436 PAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLT--LVGG 493
P + ++ S ST+ P+ +L+L PTRELA QI+ IA DG+ + T + GG
Sbjct: 61 PLLNRMIPKASFSTSPAKHPVRMLVLTPTRELAEQISKNVIAY---ADGLPLRTSLIYGG 117
Query: 494 TRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRK 553
F + L I++ATPGRLLDH+E ++ + L ++ L+LDEAD +LD+GF
Sbjct: 118 VDFNAQKHELMRG-ADIVIATPGRLLDHVEQRT---INLNQVEFLILDEADRMLDMGFML 173
Query: 554 DVENIVDCLPRRRQSLLFSATMP---KELVLKREHTYIDTVGLGSVETPVKIKQSCL-VA 609
D+ I+ LP RRQSLL+SAT + L K H ++ + T I Q V+
Sbjct: 174 DLLKILAQLPSRRQSLLYSATFSDNIRSLAQKFLHDPVEITVASNNSTASTITQEIFSVS 233
Query: 610 PHELHFQILHHLLKEHILGTPDYK-VIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQL 668
E + +L+ +L + ++ VI+F + + L L + ++ + ++ K Q
Sbjct: 234 EAEKNAALLY------LLASRNFNNVIIFSNRKITCKNLERYLNNLDLSAQSLHGDKTQS 287
Query: 669 YRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKE 728
R + F++SK ILV +DV+ARG+D DV +V+ +PP E Y+HR+GRTGR G++
Sbjct: 288 ERTKALNLFKSSKCNILVATDVAARGLDISDVDAVINYELPPTSEDYVHRIGRTGRAGRK 347
Query: 729 GEGVLLLAPWEEYFLDDLKDL 749
G + + + E+ L +++ L
Sbjct: 348 GIAISMYSSDEKESLHEIETL 368
>gi|261409742|ref|YP_003245983.1| DEAD/DEAH box helicase domain-containing protein [Paenibacillus sp.
Y412MC10]
gi|261286205|gb|ACX68176.1| DEAD/DEAH box helicase domain protein [Paenibacillus sp. Y412MC10]
Length = 538
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 136/372 (36%), Positives = 202/372 (54%), Gaps = 24/372 (6%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F + GI ++ L G + T VQ+ ++ L+GKD + +AKTGTGK++AF+LP ++
Sbjct: 14 FQQLGIDEQRVRKLKEQGITEPTPVQQESIPLLLQGKDVIARAKTGTGKTLAFMLPILQH 73
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNH-DGIGVLTLVGGTRFKVD 499
+ + P LI+ PTRELA QI EA L DGI +L + GG +
Sbjct: 74 I------DPKRAYP--QALIVAPTRELALQITEEAKKLTAGEPDGIKILAVYGGQDVEKQ 125
Query: 500 QRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIV 559
R+LE Q+++ TPGRLLDH+ + + L G+K LVLDEAD +L +GF +VE ++
Sbjct: 126 LRKLEGG-RQLIIGTPGRLLDHLRRGT---LELGGVKQLVLDEADQMLHMGFLDEVEALI 181
Query: 560 DCLPRRRQSLLFSATMP---KELVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQ 616
LP RRQ++LFSATMP K+L + +D V G+ P++ Q +V + Q
Sbjct: 182 HALPYRRQTMLFSATMPAGVKQLAGNYMNQPVDIVIKGASPIPLEQIQQVVVECTDRSKQ 241
Query: 617 -ILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISE 675
L +++EH P + I+FC T + L L E++ Q R+ + +
Sbjct: 242 DALRAMIEEH---NP-FLAIIFCRTKRRATTLNEALLAHGYQSDELHGDLSQAKREAVMK 297
Query: 676 EFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLL 735
FR +K +LV +DV+ARG+D VT V +P D E YIHR+GRTGR G G +
Sbjct: 298 RFREAKLQLLVATDVAARGLDVEGVTHVFNYDMPHDVESYIHRIGRTGRAGGSGMAITFA 357
Query: 736 APWEEYFLDDLK 747
A + L+DL+
Sbjct: 358 AGKD---LNDLQ 366
>gi|254581554|ref|XP_002496762.1| ZYRO0D07546p [Zygosaccharomyces rouxii]
gi|238939654|emb|CAR27829.1| ZYRO0D07546p [Zygosaccharomyces rouxii]
Length = 494
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 167/492 (33%), Positives = 255/492 (51%), Gaps = 53/492 (10%)
Query: 352 RKEISKNKLNGNGEKKEKREEEPILSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLS 411
R+E +N + + E EK LSQ F E +S T+KA+ G+ MT VQ T+
Sbjct: 10 REEAEENDVEQHEESSEK------LSQT-FGELELSQPTLKAIDKMGFTTMTSVQARTIP 62
Query: 412 ACLEGKDAVVKAKTGTGKSIAFLLPAIEAV--LKATSSSTTQLVPPIYVLILCPTRELAS 469
L G+D + AKTG+GK++AFL+PAIE + LK + T V+++ PTRELA
Sbjct: 63 PLLAGRDVLGAAKTGSGKTLAFLIPAIERLHSLKFKPRNGTG------VIVITPTRELAL 116
Query: 470 QIAAEAIALLKNHD-GIGVLTLVGGTRFKVDQRRLESDP----CQILVATPGRLLDHIEN 524
QI A L++ H G+ ++GG RR E+D +L+ATPGRLLDH++N
Sbjct: 117 QIFGVARELMEFHSQTFGI--VIGGA-----NRRQEADKLVKGVNLLIATPGRLLDHLQN 169
Query: 525 KSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRR-RQSLLFSATMPKE----- 578
G + LK L++DEAD +L++GF +++ I+ LP RQS+LFSAT +
Sbjct: 170 TKGFVFK--NLKALIIDEADRILEIGFEEEMRQIIKILPNEDRQSMLFSATQTTKVEDLA 227
Query: 579 -LVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILHHLLKEHILGTPDYKVIVF 637
+ L+ +I+ V T ++Q +V + F +L LK + K+IVF
Sbjct: 228 RISLRAGPLFINVVSEKDNSTVEGLEQGYVVCDSDKRFLLLFSFLKRN----QKKKIIVF 283
Query: 638 CSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDY 697
S+ LL + + V E++ ++ Q R EF ++R ILV++DV+ARG+D
Sbjct: 284 LSSCNSVKYYAELLNYIDLPVLELHGKQKQQKRTNTFFEFCNAERGILVSTDVAARGLDI 343
Query: 698 PDVTSVVQVGIPPDREQYIHRLGRTGREGK-EGEGVLLLAPWEEYFLDDLK--DLPLDKL 754
P V ++Q P D YIHR+GRT R K +G+ ++ L P E FL LK +PL++
Sbjct: 344 PAVDWIIQFDPPDDPRDYIHRVGRTARGAKGKGKSLMFLTPNELGFLRYLKAAKVPLNEY 403
Query: 755 QLPH---LNPEIQLQMDNHMAKIDNNVKEAAYHAWLGYY--NSIREIGR-DKTTLVELAN 808
+ P N + QL+ + + Y A+L Y +S++ + + DK L
Sbjct: 404 EFPTNKIANVQSQLEKLIRSNYYLHQTAKDGYRAYLQAYASHSLKTVYQIDKLDLA---- 459
Query: 809 KFAQSIGLQRPP 820
K A+S G PP
Sbjct: 460 KVAKSYGFPVPP 471
>gi|254577701|ref|XP_002494837.1| ZYRO0A10802p [Zygosaccharomyces rouxii]
gi|238937726|emb|CAR25904.1| ZYRO0A10802p [Zygosaccharomyces rouxii]
Length = 771
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 150/459 (32%), Positives = 244/459 (53%), Gaps = 32/459 (6%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F + +S ++ L A Y+++T +Q ++ L+G D + AKTG+GK++AFL+P +E
Sbjct: 41 FQDLPLSNAVLRGLKDASYVKLTDIQRDSIPVSLKGNDVLGAAKTGSGKTLAFLIPVLEK 100
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+ + + + LI+ PTRELA QI E + + H ++GG K +
Sbjct: 101 LYRERWTE----YDGVGALIISPTRELAMQIY-EVLIKIGTHCSFSAGLVIGGKDVKFEA 155
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
R+ IL+ TPGRLL H++ GL++ L+MLVLDEAD LD+GF+K ++ IV
Sbjct: 156 ERISK--INILIGTPGRLLQHLDQSVGLNID--NLQMLVLDEADRCLDMGFKKTLDAIVS 211
Query: 561 CLPRRRQSLLFSATMPKEL--VLKREHTYIDTVGL-----GSV-ETPVKIKQSCLVAPHE 612
LP RQ+LLFSAT + L + + T TVG GS ETP ++Q +V
Sbjct: 212 NLPPIRQTLLFSATQSQSLNDLARLSLTDYKTVGTPANVSGSQPETPETLQQHYIVVELA 271
Query: 613 LHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK--MNVREMYSRKPQLYR 670
L +K H+ K+IVF S+ +Y R+++ +++ ++ R+ Q R
Sbjct: 272 DKLDTLFSFIKTHL----KCKMIVFFSSSKQVHFVYETFRKLQPGISLMHLHGRQKQRAR 327
Query: 671 DRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGE 730
++F ++++ L+ +DV +RG+D+P V VVQV P + + YIHR+GR+ R GK+G+
Sbjct: 328 TETLDKFSRAQQVCLIATDVVSRGIDFPAVDWVVQVDCPENVDTYIHRVGRSARYGKQGK 387
Query: 731 GVLLLAPWE-EYFLDDLKDLPLDKLQLPHLNPEIQL---QMDNHMAKIDNNVKEAAYHAW 786
+++L P E E FL LK ++ L + + Q+ + + K D +K A+
Sbjct: 388 SLIMLTPQENEPFLQRLKGRRIEPNMLNIKQSKKKSIKPQLQSLLFK-DPELKYLGQKAF 446
Query: 787 LGYYNSIREIGRDKTTLV--EL-ANKFAQSIGLQRPPPL 822
+ Y SI I +D +L +FAQS+GL P +
Sbjct: 447 ISYVRSIY-IQKDHEVFKFDQLPTEEFAQSLGLPGAPKI 484
>gi|403234306|ref|ZP_10912892.1| ATP-dependent RNA helicase [Bacillus sp. 10403023]
Length = 433
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 133/366 (36%), Positives = 202/366 (55%), Gaps = 19/366 (5%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F + GI L + G ++ T +QE T+ A L+GKD + KA+TGTGK++AF+LP +E
Sbjct: 4 FLQLGIRKEINHTLKSLGIVKPTPIQERTIPAVLKGKDVIAKAQTGTGKTLAFVLPILEK 63
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+ P + LIL PTRELA QI+ E +++N +GI VL + GG
Sbjct: 64 IDVHN--------PDVQALILTPTRELAQQISKEIKRMIENVEGINVLAVYGGQDVAHQL 115
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
++L+ I+VATPGRLLDH+ + + L +K LV+DEAD +L +GF +V++I+
Sbjct: 116 KKLKG-AQHIVVATPGRLLDHVRRGT---IDLSSIKRLVIDEADQMLLMGFLPEVDDIIQ 171
Query: 561 CLPRRRQSLLFSATMPKEL--VLKREHTYIDTVGLGSVETPVK-IKQSCLVAPHELHFQI 617
RQ++LFSATMP E+ + K+ + + + + + V+ IKQ +
Sbjct: 172 ETFPSRQTMLFSATMPTEIRSLAKKYMVEPEFIEVKAKKVTVEEIKQVVIETTDRRKQAT 231
Query: 618 LHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEF 677
L HL++EH + I+FC T + + L+ L E++ PQ R++ + F
Sbjct: 232 LLHLIEEH----RPFLAIIFCRTKVRANKLHEALIANGFESDELHGDLPQSKREKAMKRF 287
Query: 678 RASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLAP 737
R +K LV +DV+ARG+D VT V IP D E Y+HR+GRTGR G +G L+ P
Sbjct: 288 REAKTQFLVATDVAARGLDVEGVTHVYNYDIPHDVESYVHRIGRTGRAGGDGVAYTLVDP 347
Query: 738 WEEYFL 743
+ FL
Sbjct: 348 KDMEFL 353
>gi|283457475|ref|YP_003362053.1| superfamily II DNA and RNA helicase [Rothia mucilaginosa DY-18]
gi|283133468|dbj|BAI64233.1| superfamily II DNA and RNA helicase [Rothia mucilaginosa DY-18]
Length = 732
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 153/463 (33%), Positives = 233/463 (50%), Gaps = 26/463 (5%)
Query: 368 EKREEEPILSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGT 427
+K EEE + RF + G+ + AL GY + + +QE T+ LEG D V A+TGT
Sbjct: 54 DKAEEEGV----RFTDLGLDARVLAALEEVGYEKPSPIQEQTIPLLLEGHDVVGLAQTGT 109
Query: 428 GKSIAFLLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNH-DGIG 486
GK+ AF LPA+ + A + + VL+L PTRELA Q+A EA + H +
Sbjct: 110 GKTAAFALPALSRM--AELADINGVSRDTQVLVLAPTRELALQVA-EAFSSYATHMEDFT 166
Query: 487 VLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHL 546
VL + GG+ + L Q++V TPGR++DH+E S + L L+ LVLDEAD +
Sbjct: 167 VLPIYGGSPYGPQLAGLRR-GAQVVVGTPGRVIDHLEKGS---LDLSNLQYLVLDEADEM 222
Query: 547 LDLGFRKDVENIVDCLPRRRQSLLFSATMPKELVLKREHTYIDTVGLGSVETPVKIKQSC 606
L +GF +DVE I++ P +Q LFSATMP + K Y++ E VK K +
Sbjct: 223 LRMGFAEDVEKILEGTPDSKQVALFSATMPNS-IRKIAQQYLND----PREVRVKAKTTT 277
Query: 607 LVAPHELHFQILH-HLLKE--HILGTPDYK-VIVFCSTGMVTSLLYLLLREMKMNVREMY 662
+ + Q++H H L +L +Y +IVF T T + L+ +
Sbjct: 278 SSNISQRYMQVMHSHKLDAMTRVLEVENYDGIIVFVRTKKETEEVADKLKARGFAAAAIN 337
Query: 663 SRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRT 722
PQ R+R + R + ILV +DV+ARG+D ++ VV IP D E Y+HR+GRT
Sbjct: 338 GDIPQQLRERTVDALRDGRIDILVATDVAARGLDVERISLVVNYDIPHDTESYVHRIGRT 397
Query: 723 GREGKEGEGVLLLAPWEEYFLDDLKDLPLDKLQLPHLNPEIQLQMDNHMAKIDNNVKEAA 782
GR G+EG +L + P E+Y L ++ K++ H+ P + + + + E
Sbjct: 398 GRAGREGAAILFVTPREKYMLRQIEKATRQKVEPMHM-PTAEAVNETRKQRFAQQITETI 456
Query: 783 YHAWLGYYNSIREIGRDK--TTLVELANKFAQSIGLQRPPPLF 823
L ++ I E ++ TT ++A A + Q+ P F
Sbjct: 457 ESEDLSFFRQIIEDYENEHDTTAEDIAAALA--VIAQQGRPFF 497
>gi|238028205|ref|YP_002912436.1| ATP-dependent RNA helicase 2 [Burkholderia glumae BGR1]
gi|237877399|gb|ACR29732.1| Putative ATP-dependent RNA helicase 2 [Burkholderia glumae BGR1]
Length = 480
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 135/386 (34%), Positives = 212/386 (54%), Gaps = 21/386 (5%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
FD+ G++P +KA+ GY + T +Q + L G+D + A+TGTGK+ +F LP I+
Sbjct: 13 FDQFGLAPDILKAIADQGYTKPTPIQAKAIPVVLSGRDVMGAAQTGTGKTASFSLPIIQR 72
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+L ++S + P+ LIL PTRELA Q+AA + K H + + GG
Sbjct: 73 LLPQANTSASPARHPVRALILTPTRELADQVAANVHSYAK-HTALRSAVVFGGVDMNPQM 131
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
L +IL+ATPGRLLDH++ K+ L ++MLVLDEAD +LD+GF D++ I++
Sbjct: 132 AELRRG-VEILIATPGRLLDHVQQKTA---NLGQVQMLVLDEADRMLDMGFLPDLQRILN 187
Query: 561 CLPRRRQSLLFSATMPKELVLKREHTYI---DTVGLG-SVETPVKIKQSCL-VAPHELHF 615
LP+ RQ+LLFSAT E + K TY+ T+ + S T + Q +A +
Sbjct: 188 LLPKARQTLLFSATFSPE-IKKLAATYLTNPQTIEVARSNATATNVTQIVYDIAEGDKQA 246
Query: 616 QILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISE 675
++ L+++ L +VIVFC++ + S L LL + ++ + Q R + E
Sbjct: 247 AVVK-LIRDRAL----KQVIVFCNSKIGASRLARLLERDGVVATAIHGDRSQNERMQALE 301
Query: 676 EFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLL 735
F+ + LV +DV+ARG+D ++ +V+ +P E Y+HR+GRTGR G G+ + L
Sbjct: 302 AFKRGEVEALVATDVAARGLDIAELPAVINFDLPFSAEDYVHRIGRTGRAGASGDALSLC 361
Query: 736 APWEEYFLDDL-----KDLPLDKLQL 756
+P E L D+ +DLPL L +
Sbjct: 362 SPNERKQLADIEKLIKRDLPLQPLAI 387
>gi|227501650|ref|ZP_03931699.1| DEAD-box helicase [Corynebacterium accolens ATCC 49725]
gi|306835824|ref|ZP_07468821.1| ATP-dependent RNA helicase [Corynebacterium accolens ATCC 49726]
gi|227077675|gb|EEI15638.1| DEAD-box helicase [Corynebacterium accolens ATCC 49725]
gi|304568298|gb|EFM43866.1| ATP-dependent RNA helicase [Corynebacterium accolens ATCC 49726]
Length = 623
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 133/389 (34%), Positives = 204/389 (52%), Gaps = 28/389 (7%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F+ G+ ++A+ G+ + +Q T+ +EG+D V A+TGTGK+ AF LP +
Sbjct: 57 FEHLGLPDKILQAVAKVGFTTPSPIQAETIPILMEGRDVVGLAQTGTGKTAAFALPVL-- 114
Query: 441 VLKATSSSTTQLVPPI---YVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFK 497
+QL P L+L PTRELA Q+A + + GI VL + GG +
Sbjct: 115 ---------SQLDPQARHPQALVLAPTRELALQVADAFQSFAETLKGIEVLPIYGGQAYG 165
Query: 498 VDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVEN 557
+ L Q++V TPGR++DH+E S + L L+ LVLDEAD +L++GF++DVE
Sbjct: 166 IQLSGLRRG-AQVIVGTPGRVIDHLEKGS---LDLSQLQFLVLDEADEMLNMGFQEDVER 221
Query: 558 IVDCLPRRRQSLLFSATMP---KELVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELH 614
I++ P R+Q LFSATMP + L + H + T IKQ L+ PH
Sbjct: 222 ILESTPDRKQVALFSATMPNAIRRLSKQYLHNPAEVTVKSERRTNDNIKQRFLLIPHRAK 281
Query: 615 FQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRIS 674
+L+ + T D +IVFC T T + LR+ + + Q R+R
Sbjct: 282 MDAFTRILE---VITYD-AIIVFCRTKHETEEVAEALRDRGYSAAAINGDIAQAQRERTV 337
Query: 675 EEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLL 734
++ + + ILV +DV+ARG+D +T VV IP D E Y+HR+GRTGR G+ GE +L
Sbjct: 338 DQLKDGRLDILVATDVAARGLDVERITHVVNFDIPNDTESYVHRIGRTGRAGRSGEAILF 397
Query: 735 LAPWEEYFLDDLKDLP---LDKLQLPHLN 760
+ P E L ++ + L+++ LP ++
Sbjct: 398 VTPRERRMLRSIERVTNARLEEMDLPSVD 426
>gi|213409972|ref|XP_002175756.1| ATP-dependent RNA helicase Has1 [Schizosaccharomyces japonicus
yFS275]
gi|212003803|gb|EEB09463.1| ATP-dependent RNA helicase Has1 [Schizosaccharomyces japonicus
yFS275]
Length = 572
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 164/496 (33%), Positives = 255/496 (51%), Gaps = 56/496 (11%)
Query: 357 KNKLNGNGEKKEKREEEPILSQKR----FDECGISPLTIKALTAAGYIQMTRVQEATLSA 412
K K + G ++ E ++S K F + +S T+ A+ GY +MT VQ T+
Sbjct: 57 KEKESSEGHEQVPDRPEVVVSAKENPELFTDLPLSEKTLNAIKDIGYEKMTEVQARTIPP 116
Query: 413 CLEGKDAVVKAKTGTGKSIAFLLPAIEAV--LKATSSSTTQLVPPIYVLILCPTRELASQ 470
L G+D + AKTG+GK++AFL+PAIE + LK + T V+I+ PTRELA Q
Sbjct: 117 LLAGRDVLGAAKTGSGKTLAFLIPAIETLYSLKFKPRNGTG------VIIVSPTRELALQ 170
Query: 471 IAAEAIALLK-NHDGIGVLTLVGGTRFKVDQRRLESDP----CQILVATPGRLLDHIENK 525
I A LLK +H G++ +GG RR E+D +LVATPGRLLDH++N
Sbjct: 171 IFGVAKELLKYHHQTFGIV--IGGA-----NRRAEADKLVKGVNLLVATPGRLLDHLQNT 223
Query: 526 SGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLP-RRRQSLLFSATMPKE------ 578
G R L+ L++DEAD +L++GF ++ I LP RQ++LFSAT +
Sbjct: 224 KGFVFR--NLRSLIIDEADRILEIGFEDEMRQIAKVLPSENRQTMLFSATQTTKVEDLAR 281
Query: 579 LVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILHHLLKEHILGTPDYKVIVFC 638
+ L+ YI+ T ++Q +V + F +L LK ++ KVIVF
Sbjct: 282 ISLRPGPLYINVDAGKDTSTADGLEQGYVVVESDKRFLLLFSFLKRNL----KKKVIVFM 337
Query: 639 STGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYP 698
S+ + LL + + V +++ ++ Q R EF +++ I++ +DV+ARG+D P
Sbjct: 338 SSCASVKYMAELLNYIDLPVLDLHGKQKQQRRTNTFFEFCNAEKGIMLCTDVAARGLDIP 397
Query: 699 DVTSVVQVGIPPDREQYIHRLGRTGREGK-EGEGVLLLAPWEEYFLDDLK--DLPLDKLQ 755
V +VQ P D YIHR+GRT R K +G ++ L P E FL LK +PL++ +
Sbjct: 398 AVDWIVQYDPPDDPRDYIHRVGRTARGAKGKGRSLIFLTPSELGFLRYLKAAKVPLNEYE 457
Query: 756 LP-HLNPEIQLQMDNHMAK---IDNNVKEAAYHAWLGYY-----NSIREIGRDKTTLVEL 806
P + +Q Q++ ++K + + K+ Y ++L Y SI +I + T
Sbjct: 458 FPSNKVANVQSQLEKLVSKNYYLQQSAKD-GYRSYLQAYASYSLKSIFDINKLDLT---- 512
Query: 807 ANKFAQSIGLQRPPPL 822
K A+S G PP +
Sbjct: 513 --KVAKSFGFATPPSV 526
>gi|194222171|ref|XP_001916624.1| PREDICTED: ATP-dependent RNA helicase DDX18 [Equus caballus]
Length = 623
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 153/451 (33%), Positives = 246/451 (54%), Gaps = 41/451 (9%)
Query: 390 TIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSST 449
T+KA+ G+ MT +Q ++ LEG+D + AKTG+GK++AFL+PA+E ++K
Sbjct: 143 TLKAIKEMGFTNMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPAVELIVK------ 196
Query: 450 TQLVP--PIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDP 507
+ +P VLIL PTRELA Q L+ +H L ++GG+ + ++L ++
Sbjct: 197 LKFMPRNGTGVLILSPTRELAMQTFGVLKELMTHHIHTYGL-IMGGSNRSAEAQKL-ANG 254
Query: 508 CQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQ 567
I+VATPGRLLDH++N G + L+ LV+DEAD +LD+GF ++++ I+ LP RRQ
Sbjct: 255 INIIVATPGRLLDHMQNTPGFMYK--NLQCLVIDEADRILDVGFEEELKQIIKLLPTRRQ 312
Query: 568 SLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILHHL 621
++LFSAT ++ + LK+E Y+ + T ++Q +V P E F +L
Sbjct: 313 TMLFSATQTRKVEDLARISLKKEPLYVGVDDDKANATVDGLEQGYVVCPSEKRFLLLFTF 372
Query: 622 LKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEFRASK 681
LK++ K++VF S+ Y LL + + V ++ ++ Q R +F +
Sbjct: 373 LKKN----RKKKLMVFFSSCKSVKYHYELLNYIDLPVLAIHGKQKQNKRTTTFFQFCNAD 428
Query: 682 RLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEG--VLLLAPWE 739
IL+ +DV+ARG+D P+V +VQ P D ++YIHR+GRT R G G G +L+L P E
Sbjct: 429 SGILLCTDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTAR-GLNGRGHALLILRPEE 487
Query: 740 EYFLDDLKD--LPLDKLQLPHLN-PEIQLQMDNHMAKIDNNVKEAAYHAWLGYYNSIREI 796
FL LK +PL + + +IQ Q++ + K + + ++A A+ Y IR
Sbjct: 488 LGFLRYLKQSKVPLSEFEFSWSKISDIQSQLEKLIEK-NYFLHKSAQEAYKSY---IR-- 541
Query: 797 GRDKTTLVELAN-------KFAQSIGLQRPP 820
D +L ++ N + A S G + PP
Sbjct: 542 AYDSHSLKQIFNVNNLNLPQVALSFGFKVPP 572
>gi|354547499|emb|CCE44233.1| hypothetical protein CPAR2_400340 [Candida parapsilosis]
Length = 758
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 144/470 (30%), Positives = 243/470 (51%), Gaps = 48/470 (10%)
Query: 377 SQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLP 436
+ ++F + I+ T++ L + +I +T +Q+ T+ L+G D + A+TG+GK++AFL+P
Sbjct: 47 AMQQFSDLPITQNTLRGLKESSFISLTDIQKKTIPIALKGHDLMGTARTGSGKTLAFLIP 106
Query: 437 AIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRF 496
IE ++K + L LI+ PTRELA QI E +A + ++ + GG
Sbjct: 107 VIEILIKNDITEYDGLA----ALIVSPTRELAVQIF-EVLAKIGKYNSFSAGLVTGGKDV 161
Query: 497 KVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVE 556
+ ++ R+ ILV TPGR+ H+ G+ L++LVLDEAD LD+GF+K ++
Sbjct: 162 QYEKERISR--MNILVGTPGRISQHLNEAVGMETS--NLQVLVLDEADRCLDMGFKKQID 217
Query: 557 NIVDCLPRRRQSLLFSATMPKEL--VLKREHTYIDTVGLGS---VET-PVKIKQSCLVAP 610
NIV LP RQ+LLFSAT + + + T +G S V T P + Q + P
Sbjct: 218 NIVKHLPPTRQTLLFSATTTDSVQDLARLSLTNPKRIGTSSDKDVSTIPESLDQYYVRVP 277
Query: 611 HELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK--MNVREMYSRKPQL 668
+ +L +K H+ K++VF S+ Y R ++ +++ ++Y R Q
Sbjct: 278 LDEKLDVLWSFIKSHLKS----KILVFFSSSKQVQYTYETFRTLQPGISLLKLYGRNKQT 333
Query: 669 YRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKE 728
R + +F ++ + L +D+ ARG+D+P + V+QV P D Y+HR+GR+ R G++
Sbjct: 334 SRLETTMKFAQAQHVCLFATDIVARGLDFPAIDWVIQVDCPEDVATYVHRVGRSARFGRQ 393
Query: 729 GEGVLLLAPWEEYFLDDLKDLPLDKLQLPHLNPEI-------------QLQMDNHMAKID 775
G+ +L+L P EE D L +L++ ++ P++ QLQ + D
Sbjct: 394 GKSLLMLTPSEE-------DAFLQRLKIHNIEPKLMNIKQKSKKSIRPQLQ---SLCFKD 443
Query: 776 NNVKEAAYHAWLGYYNSIREIGRDKTTL-VEL--ANKFAQSIGLQRPPPL 822
+K A++ Y+ S+ I +DK VE A +A S+GL P +
Sbjct: 444 PVMKNLGQRAFIAYFKSVY-IQKDKEVFDVESLPAEAYAASLGLPGAPKI 492
>gi|384133313|ref|YP_005515925.1| Putative ATP-dependent RNA helicase [Acinetobacter baumannii
1656-2]
gi|322509533|gb|ADX04987.1| Putative ATP-dependent RNA helicase [Acinetobacter baumannii
1656-2]
Length = 561
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 128/379 (33%), Positives = 202/379 (53%), Gaps = 19/379 (5%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
K F E + +AL G+ T VQE ++ A LEGKD +V ++TG+GK+ AFLLP +
Sbjct: 7 KTFAEFSLHETLQQALEGLGFTNPTPVQEQSIPAALEGKDLLVSSQTGSGKTAAFLLPTL 66
Query: 439 EAVLKATS----SSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGT 494
+ + + V +L+LCPTRELA Q++ +AIA +++ G+ + ++GG
Sbjct: 67 HNLAGQDTFVPFKERMKAVTQPSILVLCPTRELAQQVSQDAIAFVRHMKGVRIAAIMGGM 126
Query: 495 RFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKD 554
F ++L+ Q++VATPGRLLD + + ++L + L++DEAD +LDLGF +D
Sbjct: 127 PFGKQIQQLKG--AQVVVATPGRLLDLVNRRQ---LKLDKVDALIVDEADRMLDLGFSED 181
Query: 555 VENIVDCLPRRRQSLLFSATMPKELVLKREHTYIDTVGLGSVETPVKIKQSCLVAPH--- 611
+E I D R Q+L+FSAT ++ E + + ++ET H
Sbjct: 182 LEAISDLAANRGQTLMFSATFADRIIRLAERMMNEPERI-AIETGHSTNTDITQTLHWTD 240
Query: 612 --ELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLY 669
E ++L H L + L + +VF ST T +L L E +V ++ PQ
Sbjct: 241 GFEHKKKLLTHWLADETLD----QAVVFASTQEDTDMLAEELAEAGHSVVALHGAMPQTV 296
Query: 670 RDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEG 729
R+R R + ILV +DV+ARG+D P ++ V+ G+P E Y+HR+GRTGR G+ G
Sbjct: 297 RNRRLRSIREGRAKILVATDVAARGLDVPTISHVINFGLPMKHEDYVHRIGRTGRAGRTG 356
Query: 730 EGVLLLAPWEEYFLDDLKD 748
+ + L E + L+D
Sbjct: 357 QAITLATYRERGKIRALED 375
>gi|354581663|ref|ZP_09000566.1| DEAD/DEAH box helicase domain protein [Paenibacillus lactis 154]
gi|353200280|gb|EHB65740.1| DEAD/DEAH box helicase domain protein [Paenibacillus lactis 154]
Length = 524
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 134/361 (37%), Positives = 193/361 (53%), Gaps = 21/361 (5%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F + GI ++ L G T VQ+ T+ LEGKD + +A+TGTGK++AF+LP ++
Sbjct: 4 FQQLGIDEQRVRKLKEQGIAVPTPVQQETIPLLLEGKDVIARARTGTGKTLAFMLPILQH 63
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNH-DGIGVLTLVGGTRFKVD 499
+ P LI+ PTRELA QI EA L DGI +L + GG +
Sbjct: 64 IDPNR--------PFPQALIIAPTRELALQITEEARKLTAGEPDGIKILAVYGGQDVEKQ 115
Query: 500 QRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIV 559
R+LE +++ TPGRLLDH+ + + L G+KMLVLDEAD +L +GF +VE ++
Sbjct: 116 LRKLEGG-RHLIIGTPGRLLDHLRRGT---LELGGVKMLVLDEADQMLHMGFLAEVEALI 171
Query: 560 DCLPRRRQSLLFSATMP---KELVLKREHTYIDTVGLGSVETPV-KIKQSCLVAPHELHF 615
D LP RRQ++LFSATMP K+L + + D V G+ P+ +IKQ +
Sbjct: 172 DALPYRRQTMLFSATMPAGVKQLAARYMNKPEDIVIKGASPIPLEQIKQVVVECTDRSKQ 231
Query: 616 QILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISE 675
L +++ + + I+FC T S L L E++ Q R+ + +
Sbjct: 232 DALRAMIERY----RPFLAIIFCRTKRRASALNEALLAAGYESDELHGDLSQAKREAVMK 287
Query: 676 EFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLL 735
FR +K +LV +DV+ARG+D VT V +P D E YIHR+GRTGR G G V +
Sbjct: 288 RFREAKLQLLVATDVAARGLDVEGVTHVFNYDMPHDVESYIHRIGRTGRAGGSGMAVTFM 347
Query: 736 A 736
A
Sbjct: 348 A 348
>gi|427400760|ref|ZP_18891998.1| hypothetical protein HMPREF9710_01594 [Massilia timonae CCUG 45783]
gi|425720273|gb|EKU83196.1| hypothetical protein HMPREF9710_01594 [Massilia timonae CCUG 45783]
Length = 523
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 126/378 (33%), Positives = 214/378 (56%), Gaps = 22/378 (5%)
Query: 380 RFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIE 439
RF + G++P +AL+ GY+ T +Q + L+G+D + A+TGTGK+ +F LP ++
Sbjct: 41 RFADFGLAPEIQRALSDQGYVHPTPIQAQAIPVVLQGRDVMGAAQTGTGKTASFSLPILQ 100
Query: 440 AVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVD 499
++ ++S + P+ L+L PTRELA Q+ A+ + H + + GG K
Sbjct: 101 LLMPHANASMSPARHPVRALVLVPTRELAVQV-ADNVKAYARHTPLRATVVFGGMDMK-P 158
Query: 500 QRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIV 559
Q + +I++ATPGRLLDHIE K +V L ++MLV+DEAD +LD+GF D++ I+
Sbjct: 159 QTEILRRGVEIVIATPGRLLDHIEQK---NVSLGQVQMLVMDEADRMLDMGFLPDLQRII 215
Query: 560 DCLPRRRQSLLFSATMPKELVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILH 619
+ LP++RQ+L+FSAT E + K +T+++ P+ I+ + A E QI++
Sbjct: 216 NLLPKQRQNLMFSATFSPE-IKKLANTFLN--------NPLTIEVARSNATAEKVTQIVY 266
Query: 620 HL-------LKEHILGTPDYK-VIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRD 671
+ + EH++ + D K VI+F +T + S L L + + ++ K Q R
Sbjct: 267 KVDEEQKRDVVEHLIRSRDMKQVIIFSNTKIGASRLSSHLEKRGVKASAIHGDKTQQERM 326
Query: 672 RISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEG 731
+ F+ +LV +DV+ARG+D D+ +V+ +P + E Y+HR+GRTGR G G+
Sbjct: 327 AALDAFKNGSVEVLVATDVAARGLDISDLPAVINYDLPYNAEDYVHRIGRTGRAGASGDA 386
Query: 732 VLLLAPWEEYFLDDLKDL 749
+ + + +E L D++ L
Sbjct: 387 LSVYSDKDERLLADIEKL 404
>gi|255326780|ref|ZP_05367856.1| cold-shock DEAD box protein A [Rothia mucilaginosa ATCC 25296]
gi|255295997|gb|EET75338.1| cold-shock DEAD box protein A [Rothia mucilaginosa ATCC 25296]
Length = 744
Score = 207 bits (528), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 149/451 (33%), Positives = 227/451 (50%), Gaps = 22/451 (4%)
Query: 380 RFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIE 439
RF + G+ + AL GY + + +QE T+ LEG D V A+TGTGK+ AF LPA+
Sbjct: 67 RFTDLGLDARVLAALEEVGYEKPSPIQEQTIPLLLEGHDVVGLAQTGTGKTAAFALPALS 126
Query: 440 AVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNH-DGIGVLTLVGGTRFKV 498
+ A + + VL+L PTRELA Q+A EA + H + VL + GG+ +
Sbjct: 127 RM--AELADVNGISRDTQVLVLAPTRELALQVA-EAFSSYATHMEDFTVLPIYGGSPYGP 183
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
L Q++V TPGR++DH+E S + L L+ LVLDEAD +L +GF +DVE I
Sbjct: 184 QLAGLRR-GAQVVVGTPGRVIDHLEKGS---LDLSNLQYLVLDEADEMLRMGFAEDVEKI 239
Query: 559 VDCLPRRRQSLLFSATMPKELVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQIL 618
++ P +Q LFSATMP + K Y++ E VK K + + + Q++
Sbjct: 240 LEGTPDSKQVALFSATMPNS-IRKIAQQYLND----PTEIRVKAKTTTSANISQRYMQVM 294
Query: 619 H-HLLKE--HILGTPDYK-VIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRIS 674
H H L +L +Y +IVF T T + L+ + PQ R+R
Sbjct: 295 HSHKLDAMTRVLEVENYDGIIVFVRTKKETEEVADKLKARGFAAAAINGDIPQQLRERTV 354
Query: 675 EEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLL 734
+ R + ILV +DV+ARG+D ++ VV IP D E Y+HR+GRTGR G+EG +L
Sbjct: 355 DALRDGRIDILVATDVAARGLDVERISLVVNYDIPHDTESYVHRIGRTGRAGREGAAILF 414
Query: 735 LAPWEEYFLDDLKDLPLDKLQLPHLNPEIQLQMDNHMAKIDNNVKEAAYHAWLGYYNSIR 794
+ P E+Y L ++ K++ H+ P + + + + E L ++ I
Sbjct: 415 VTPREKYMLRQIEKATRQKVEPMHM-PTAEAVNETRKQRFAQQITETIESEDLSFFRQII 473
Query: 795 EIGRDK--TTLVELANKFAQSIGLQRPPPLF 823
E ++ TT ++A A + Q+ P F
Sbjct: 474 EDYENEHDTTAEDIAAALA--VIAQQGRPFF 502
>gi|399116636|emb|CCG19443.1| putative ATP-dependent RNA helicase [Taylorella asinigenitalis
14/45]
Length = 444
Score = 207 bits (528), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 129/380 (33%), Positives = 206/380 (54%), Gaps = 18/380 (4%)
Query: 376 LSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLL 435
+ +K F E G ++ ++ GY+ T +Q + LEG+D + A+TGTGK+ AF L
Sbjct: 1 MDKKEFKEFGFHSKILENISNTGYLHATPIQALSFPPILEGRDVMGAAQTGTGKTAAFTL 60
Query: 436 PAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLT--LVGG 493
P + ++ S ST+ P+ +L+L PTRELA QI+ IA DG+ + T + GG
Sbjct: 61 PLLNRMIPKASFSTSPAKHPVRMLVLTPTRELAEQISKNVIAY---ADGLPLRTSLIYGG 117
Query: 494 TRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRK 553
F + L I++ATPGRLLDH+E ++ + L ++ L+LDEAD +LD+GF
Sbjct: 118 VDFNAQKLELMRG-ADIVIATPGRLLDHVEQRT---INLNQVEFLILDEADRMLDMGFMP 173
Query: 554 DVENIVDCLPRRRQSLLFSATMP---KELVLKREHTYIDTVGLGSVETPVKIKQSCL-VA 609
D+ I+ LP RRQSLL+SAT + L K H ++ + T I Q V+
Sbjct: 174 DLLKILAQLPSRRQSLLYSATFSDNIRSLAQKFLHDPVEITVASNNSTASTITQEIFSVS 233
Query: 610 PHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLY 669
E + +L+ L + VI+F + + L L + ++ + ++ K Q
Sbjct: 234 EAEKNAALLYLLASRNF-----NNVIIFSNRKITCKNLERYLNNLDLSAQSLHGDKTQSE 288
Query: 670 RDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEG 729
R + F+++K ILV +DV+ARG+D DV +V+ +PP E Y+HR+GRTGR G++G
Sbjct: 289 RTKALNLFKSAKCNILVATDVAARGLDISDVDAVINYELPPTSEDYVHRIGRTGRAGRKG 348
Query: 730 EGVLLLAPWEEYFLDDLKDL 749
+ + + EE L +++ L
Sbjct: 349 IAISMYSSDEEESLHEIETL 368
>gi|392590331|gb|EIW79660.1| DEAD-domain-containing protein [Coniophora puteana RWD-64-598 SS2]
Length = 825
Score = 207 bits (528), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 154/475 (32%), Positives = 246/475 (51%), Gaps = 30/475 (6%)
Query: 363 NGEKKEKREEEPILSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVK 422
N K+ E + S + F + IS T + L A ++ MT +Q +++ L+GKD +
Sbjct: 38 NALKQAVLEYDATSSSRAFADLPISNYTKRGLKKAFFVDMTDIQASSIHLALQGKDILGA 97
Query: 423 AKTGTGKSIAFLLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNH 482
A+TG+GK++AFL+P +E + + L LI+ PTRELA QI + + + +
Sbjct: 98 ARTGSGKTLAFLVPVLENLYRNKWGPQDGL----GALIISPTRELAVQIF-DVLRSIGGY 152
Query: 483 DGIGVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDE 542
G ++GG K ++ RL ILVATPGRLL H++ G L+MLVLDE
Sbjct: 153 HGFSAGLVIGGKNLKDERERLSR--MNILVATPGRLLQHMDQTFGFESD--NLQMLVLDE 208
Query: 543 ADHLLDLGFRKDVENIVDCLPRRRQSLLFSATMPKELVLKREHTYIDTV--GLGSV---- 596
AD +LD+GF + + ++ LP+ RQ+LLFSAT + + + D + G+G V
Sbjct: 209 ADRILDMGFARTLSALLSHLPKSRQTLLFSATQTQSVAQLARLSLNDPIPIGVGDVTSSS 268
Query: 597 ETPVKIKQSCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKM 656
P + Q + P + +L LK H+ KVIVF S+G ++ R M+
Sbjct: 269 TMPSSLSQHFSIVPLDRKLDVLWSFLKTHL----KSKVIVFLSSGKQVRFVFETFRRMQP 324
Query: 657 NV--REMYSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQ 714
V ++ ++ Q R F + +L +D++ARG+D+P + VVQV P D +
Sbjct: 325 GVPLLHLHGKQKQTARLNTYARFTGMQNAVLFATDIAARGLDFPSIDWVVQVDAPEDADT 384
Query: 715 YIHRLGRTGREGKEGEGVLLLAPWEEYFLD---DLKDLPLDKLQLPHLNPE-IQLQMDNH 770
YIHR+GRT R G+G+LLL P EE + D K + ++ +++ + IQ Q+ N
Sbjct: 385 YIHRVGRTARYDSAGKGLLLLLPSEEEGMKAALDKKGIKIENIKIRDSKTQSIQNQLQN- 443
Query: 771 MAKIDNNVKEAAYHAWLGYYNSIREIGRDKTT--LVEL-ANKFAQSIGLQRPPPL 822
+A + +K A++ Y S+ + +DK+ L EL FA+S+GL P +
Sbjct: 444 LAFQEPEIKYLGQRAFVSYVRSVH-LQKDKSIFKLDELPVESFAESLGLPGAPKI 497
>gi|387593307|gb|EIJ88331.1| hypothetical protein NEQG_01775 [Nematocida parisii ERTm3]
gi|387595980|gb|EIJ93602.1| hypothetical protein NEPG_01174 [Nematocida parisii ERTm1]
Length = 445
Score = 207 bits (528), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 149/432 (34%), Positives = 229/432 (53%), Gaps = 31/432 (7%)
Query: 401 QMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLVPPIYVLI 460
++T +Q+ + ++G+D + A TG+GK+++FL+PA E ++ + VL+
Sbjct: 27 KLTEIQQQAIPYAIKGRDLLGIANTGSGKTLSFLIPAAEKLIPEKEVKIPK------VLV 80
Query: 461 LCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLD 520
+ PTRELA Q + + L + GI + VGGT+ K D+ C ILV TPGRLLD
Sbjct: 81 IAPTRELAMQTSRVSQKLFAEYPGIRTVLFVGGTK-KADELEQMKKGCAILVCTPGRLLD 139
Query: 521 HIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQSLLFSATMPKELV 580
H+ KSGLS L ++M VLDE+D +LD+GF KD+ I+ LP++RQ+L+FSAT ++
Sbjct: 140 HL--KSGLS--LQKIEMAVLDESDRILDIGFEKDMSEILTYLPKKRQTLMFSATNTDNVL 195
Query: 581 ----LKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILHHLLKEHILGTPDYKVIV 636
L + + + V + T +KQS + P + F +L LK + KVIV
Sbjct: 196 CRSWLSKRYKKVQ-VKIDDKITAEGLKQSFVTCPEDKRFSLLFSFLKR-----TEEKVIV 249
Query: 637 FCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEFRASKRLILVTSDVSARGMD 696
F ST L + + ++S Q R ++ +EF K IL ++DV+ARG+D
Sbjct: 250 FFSTCASVMFHGELFSLLGFSAGVLHSGVKQDRRAKVFDEFCEGKIKILFSTDVAARGLD 309
Query: 697 YPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLAPWEEYFLDDLKDLPLDKLQL 756
P+V +VQ P D ++YIHR+GRT R G GE ++ L P E F+ LK L ++ +L
Sbjct: 310 IPNVRWIVQYDPPTDPKEYIHRVGRTARAGAHGEALMFLLPHERIFIQYLKHLGVEVDEL 369
Query: 757 PHLNPEIQLQMDNHMAK-IDNN--VKEAAYHAWLGYYNSIREIGRDKT---TLVELANKF 810
P+ + H K I +N ++ A A GY + K + +EL NK
Sbjct: 370 TFNEPK---DISEHFIKTISSNYYLERDAKDALKGYLQAYAGHKLKKVFDASKIEL-NKI 425
Query: 811 AQSIGLQRPPPL 822
A+S GL P +
Sbjct: 426 AKSFGLSSMPKI 437
>gi|262280249|ref|ZP_06058033.1| cold-shock DEAD box protein A (ATP-dependent RNA helicase deaD)
[Acinetobacter calcoaceticus RUH2202]
gi|262258027|gb|EEY76761.1| cold-shock DEAD box protein A (ATP-dependent RNA helicase deaD)
[Acinetobacter calcoaceticus RUH2202]
Length = 640
Score = 207 bits (528), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 125/365 (34%), Positives = 198/365 (54%), Gaps = 19/365 (5%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
K F E + +AL G+ T VQE + A LEGKD +V ++TG+GK+ AFLLP +
Sbjct: 3 KSFAEFSLHETLQQALEGLGFTTPTTVQEQAIPAALEGKDLLVSSQTGSGKTAAFLLPTL 62
Query: 439 EAVLKATS----SSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGT 494
A+ S + V +L++ PTRELA Q++ +AIAL+++ G+ + ++GG
Sbjct: 63 NALAGQESVVPFKDRMKAVTQPNILVISPTRELAQQVSQDAIALVRHMKGVRIAAIMGGM 122
Query: 495 RFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKD 554
F ++L+ Q++VATPGRLLD + + ++L + L++DEAD +LDLGF +D
Sbjct: 123 PFAKQIQQLKG--AQVVVATPGRLLDLVNRRQ---IKLDQVDALIVDEADRMLDLGFSED 177
Query: 555 VENIVDCLPRRRQSLLFSATMPKELVLKREHTYIDTVGLGSVETPVKIKQSCLVAPH--- 611
+E I + R+Q+L+FSAT ++ D + + ++ET H
Sbjct: 178 LEAISELAANRKQTLMFSATFADRIIRLASCMMKDPMRI-AIETGHSTNTDITQTLHWTD 236
Query: 612 --ELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLY 669
E ++L H L + L + +VF ST T +L L E +V ++ PQ
Sbjct: 237 GFEHKKKLLTHWLSDENLD----QAVVFASTQEDTDMLAEELAEAGHSVVALHGAMPQTV 292
Query: 670 RDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEG 729
R+R R + ILV +DV+ARG+D P ++ V+ G+P E Y+HR+GRTGR G+ G
Sbjct: 293 RNRRLRSIREGRAKILVATDVAARGLDVPTISHVINFGLPMKHEDYVHRIGRTGRAGRTG 352
Query: 730 EGVLL 734
+ + L
Sbjct: 353 QAITL 357
>gi|351694587|gb|EHA97505.1| ATP-dependent RNA helicase DDX18 [Heterocephalus glaber]
Length = 668
Score = 207 bits (528), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 144/418 (34%), Positives = 231/418 (55%), Gaps = 30/418 (7%)
Query: 390 TIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSST 449
T+KA+ G+ MT +Q ++ LEG+D + AKTG+GK++AFL+P IE ++K
Sbjct: 188 TLKAIKEMGFTNMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPVIELIVKL----- 242
Query: 450 TQLVP--PIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDP 507
+ +P LIL PTRELA Q L+ +H L ++GG+ + ++L ++
Sbjct: 243 -KFMPRNGTGALILSPTRELAMQTFGVLKELMTHHVHTYGL-IMGGSNRSAEAQKL-ANG 299
Query: 508 CQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQ 567
I+VATPGRLLDH++N G + L+ LV+DEAD +LD+GF ++++ I+ LP RRQ
Sbjct: 300 INIIVATPGRLLDHMQNTPGFMYK--NLQCLVIDEADRILDVGFEEELKQIIKLLPIRRQ 357
Query: 568 SLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILHHL 621
++LFSAT ++ + LK+E Y+ + T ++Q +V P E F +L
Sbjct: 358 TMLFSATQTRKVEDLARISLKKEPLYVGVDDDKTNATVDGLEQGYVVCPSEKRFLLLFTF 417
Query: 622 LKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEFRASK 681
LK++ K++VF S+ M Y LL + + V ++ ++ Q R +F +
Sbjct: 418 LKKN----RKKKLMVFFSSCMSVKYHYELLNYIDLPVLAIHGKQKQNKRTTTFFQFCNAD 473
Query: 682 RLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEG--VLLLAPWE 739
IL+ +DV+ARG+D P+V +VQ P D ++YIHR+GRT R G G G +L+L P E
Sbjct: 474 SGILLCTDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTAR-GLNGRGHALLILRPEE 532
Query: 740 EYFLDDLKD--LPLDKLQLPHLN-PEIQLQMDNHMAK--IDNNVKEAAYHAWLGYYNS 792
FL LK +PL + +IQ Q++ + K + + AY +++ Y+S
Sbjct: 533 LGFLRYLKQSKVPLSEFDFSWSKISDIQSQLEKLIEKNYFLHKSAQEAYKSYIRAYDS 590
>gi|187923247|ref|YP_001894889.1| DEAD/DEAH box helicase [Burkholderia phytofirmans PsJN]
gi|187714441|gb|ACD15665.1| DEAD/DEAH box helicase domain protein [Burkholderia phytofirmans
PsJN]
Length = 489
Score = 207 bits (527), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 136/387 (35%), Positives = 211/387 (54%), Gaps = 17/387 (4%)
Query: 377 SQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLP 436
S FD+ G++P +KA+ +GY T +QE + L G+D + A+TGTGK+ +F LP
Sbjct: 9 STATFDQFGLAPDILKAVKESGYTIPTPIQEQAIPVVLAGRDMMGAAQTGTGKTASFSLP 68
Query: 437 AIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRF 496
I+ +L S+S + P+ LIL PTRELA Q+AA A K H + + GG
Sbjct: 69 IIQRLLPQASTSASPARHPVRALILTPTRELADQVAANVQAYAK-HTALRSAVVFGGVDM 127
Query: 497 KVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVE 556
+L +IL+ATPGRLLDH++ K+ L +++LVLDEAD +LD+GF D++
Sbjct: 128 NPQSEQLRRG-VEILIATPGRLLDHVQQKTA---NLGQVQILVLDEADRMLDMGFLPDLQ 183
Query: 557 NIVDCLPRRRQSLLFSATMPKELVLKREHTYI---DTVGLG-SVETPVKIKQSCLVAPHE 612
I++ LP+ RQ+LLFSAT E + K TY+ T+ + S T + Q
Sbjct: 184 RILNLLPKERQTLLFSATFSGE-IKKLAATYLRNPQTIEVARSNSTATNVTQVVYEVAEG 242
Query: 613 LHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDR 672
+ L++E L +VIVFC++ + S L L + ++ + Q R +
Sbjct: 243 DKTGAVVQLIRERGL----KQVIVFCNSKIGASRLARSLERDGVVATAIHGDRTQNERMQ 298
Query: 673 ISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGV 732
+ F+ + LV +DV+ARG+D ++ +V+ +P + E Y+HR+GRTGR G G+ +
Sbjct: 299 ALDAFKRGEIEALVATDVAARGLDIAELPAVINFDLPFNAEDYVHRIGRTGRAGASGDAL 358
Query: 733 LLLAPWEEYFLDDLKDL---PLDKLQL 756
L +P E L D++ L PLD +L
Sbjct: 359 SLCSPNERKQLADIEKLIKRPLDVQRL 385
>gi|410920772|ref|XP_003973857.1| PREDICTED: probable ATP-dependent RNA helicase DDX10-like [Takifugu
rubripes]
Length = 954
Score = 207 bits (527), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 150/459 (32%), Positives = 243/459 (52%), Gaps = 37/459 (8%)
Query: 380 RFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIE 439
+F + IS T+ L A Y Q T +Q TL L GKD + AKTG+GK++AFL+P +E
Sbjct: 79 KFSDFPISKKTLLGLQGAQYRQPTEIQRQTLGFALLGKDVLGAAKTGSGKTLAFLIPVLE 138
Query: 440 AVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVD 499
+ + +S V + LI+ PTRELA Q + KNH+ L ++GG KV+
Sbjct: 139 CLYRQQWTS----VDGLGALIISPTRELAYQTFEVLRKVGKNHEFSAGL-VIGGKDLKVE 193
Query: 500 QRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIV 559
+++ I++ TPGRLL H++ + S L MLVLDEAD +LD+GF + + IV
Sbjct: 194 SEQIQH--TNIIICTPGRLLQHMDQTA--SFHAANLHMLVLDEADRILDMGFAETLNAIV 249
Query: 560 DCLPRRRQSLLFSATMPKEL-----VLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELH 614
+ LP+ RQ+LLFSAT K + + +E Y+ TP ++QS +V
Sbjct: 250 ENLPKTRQTLLFSATQTKSVKDLARLSLKEPEYVWAHEKAKFSTPATLEQSYVVCELHQK 309
Query: 615 FQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK--MNVREMYSRKPQLYRDR 672
+L+ ++ H+ K+IVF + L+ +L ++ V ++ ++ Q+ R
Sbjct: 310 VNMLYSFIRNHL----KKKIIVFFACCKEVQYLFRVLCRLRPGTPVLALHGKQQQMKRVE 365
Query: 673 ISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGV 732
+ +F +L+ +D++ARG+D+P V V+Q P D + YIHR+GRT R + GE +
Sbjct: 366 VYNDFLRKNTAVLLATDIAARGLDFPAVNWVLQFDCPEDADTYIHRVGRTARYKEGGEAL 425
Query: 733 LLLAPWEE-----YFLDDLKDLPLDKLQLPHLNPE----IQLQMDNHMAKIDNNVKEAAY 783
LLL P EE LD K +P+ K+Q +N E +Q +++ +A+ + KE A
Sbjct: 426 LLLLPSEEKGMLRQLLD--KKVPIQKIQ---VNTEKLQNVQQKLEGFLAQ-EKEQKERAQ 479
Query: 784 HAWLGYYNSIREI-GRDKTTLVELA-NKFAQSIGLQRPP 820
++ Y SI + ++ + +L ++A S+GL P
Sbjct: 480 RCFISYLRSIYLMKNKEVFDVCQLQIEEYAHSLGLAVAP 518
>gi|355683245|gb|AER97061.1| DEAD box polypeptide 18 [Mustela putorius furo]
Length = 584
Score = 207 bits (527), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 154/451 (34%), Positives = 244/451 (54%), Gaps = 41/451 (9%)
Query: 390 TIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSST 449
T++A+ G+ MT +Q ++ LEG+D + AKTG+GK++AFL+PA+E ++K
Sbjct: 105 TLRAIKEMGFTNMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPAVELIVK------ 158
Query: 450 TQLVP--PIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDP 507
+ +P VLIL PTRELA Q L+ H L ++GG+ + ++L +
Sbjct: 159 LKFMPRNGTGVLILSPTRELAMQTFGVLKELMTYHVHTYGL-IMGGSNRSAEAQKL-GNG 216
Query: 508 CQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQ 567
I+VATPGRLLDH++N G + L+ LV+DEAD +LD+GF ++++ I+ LP RRQ
Sbjct: 217 INIIVATPGRLLDHMQNTPGFMYK--NLQCLVIDEADRILDVGFEEELKQIIKLLPTRRQ 274
Query: 568 SLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILHHL 621
++LFSAT ++ + LK+E Y+ + T ++Q +V P E F +L
Sbjct: 275 TMLFSATQTRKVEDLARISLKKEPLYVGVDDDKANATVDGLEQGYVVCPSEKRFLLLFTF 334
Query: 622 LKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEFRASK 681
LK++ K++VF S+ Y LL + + V ++ R+ Q R +F +
Sbjct: 335 LKKN----RKKKLMVFFSSCKSVKYHYELLNYIDLPVLAIHGRQKQNKRTTTFFQFCNAD 390
Query: 682 RLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEG--VLLLAPWE 739
IL+ +DV+ARG+D P+V +VQ P D ++YIHR+GRT R G G G +L+L P E
Sbjct: 391 SGILLCTDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTAR-GLNGRGHALLILRPEE 449
Query: 740 EYFLDDLKD--LPLDKLQLPHLN-PEIQLQMDNHMAKIDNNVKEAAYHAWLGYYNSIREI 796
FL LK +PL + Q +IQ Q++ + K + + ++A A+ Y IR
Sbjct: 450 LGFLRYLKQSKVPLSEFQFSWSKISDIQSQLEKLIEK-NYFLHKSAQEAYKSY---IR-- 503
Query: 797 GRDKTTLVELAN-------KFAQSIGLQRPP 820
D +L ++ N + A S G + PP
Sbjct: 504 AYDSHSLKQIFNVNNLNLPQVALSFGFKVPP 534
>gi|393216315|gb|EJD01805.1| DEAD-domain-containing protein [Fomitiporia mediterranea MF3/22]
Length = 802
Score = 207 bits (527), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 148/457 (32%), Positives = 245/457 (53%), Gaps = 30/457 (6%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F + +S T K L G+++MT +Q ++ L+GKD + A+TG+GK++AFL+P +E
Sbjct: 64 FADLPVSASTKKGLKLPGFVKMTEIQAKSIPLSLKGKDVLGAARTGSGKTLAFLVPVLEI 123
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+ + L LI+ PTRELA QI E + + + ++GG K ++
Sbjct: 124 LYRKKWGPQDGL----GALIISPTRELAVQIF-EVLRSIGGYHTFSAGLVIGGKNLKDEK 178
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
RL + ILVATPGRLL H++ G L+MLVLDEAD +LD+GF + V +++
Sbjct: 179 ERL--NRMNILVATPGRLLQHMDQTFGFDCD--NLQMLVLDEADRILDMGFSRTVNALLE 234
Query: 561 CLPRRRQSLLFSATMPKEL-----VLKREHTYIDTVGLGS-VETPVKIKQSCLVAPHELH 614
LPR RQ+LLFSAT + + ++ ++ GS TP ++Q +V +
Sbjct: 235 HLPRSRQTLLFSATQTDSVKDLARLSLKDSVFVSVKEEGSHAATPKLLEQHYVVCELDRK 294
Query: 615 FQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMN--VREMYSRKPQLYRDR 672
IL +K H+ KV+VF ++G ++ ++ + ++ ++ Q R
Sbjct: 295 LDILWSFIKSHL----QSKVLVFFASGKQVRFVFETFCKLHPGSPLMHLHGKQKQATRLG 350
Query: 673 ISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGV 732
+F + K +L +D++ARG+D+P V V+QV P D E YIHR+GRT R G+G+
Sbjct: 351 TCAKFTSMKHAVLFATDLAARGLDFPSVDWVLQVDAPEDAETYIHRVGRTARYESRGKGL 410
Query: 733 LLLAPWEEY-FLDDL--KDLPLDKLQLPHLNPE-IQLQMDNHMAKIDNNVKEAAYHAWLG 788
LLL P EE L+ L K++ ++K+++ + I+ + N +A D +K A++
Sbjct: 411 LLLCPSEEEGMLEALKKKEIVVEKIKIKASKTQSIEKHLQN-LAFQDPEIKYLGQRAFVS 469
Query: 789 YYNSIREIGRDKTT--LVEL-ANKFAQSIGLQRPPPL 822
+ S+ + +DK+ + EL A +FA S+GL P +
Sbjct: 470 HMRSVYQ-QKDKSIFKIDELPAERFAASLGLPGAPKI 505
>gi|345021499|ref|ZP_08785112.1| DEAD/DEAH box helicase domain-containing protein [Ornithinibacillus
scapharcae TW25]
Length = 433
Score = 207 bits (527), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 134/377 (35%), Positives = 201/377 (53%), Gaps = 41/377 (10%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F + GI L + G I T +QE T+ + LEGKD + KA+TGTGK++AF+LP +E
Sbjct: 4 FLQLGIRKEINHTLRSLGIITPTSIQERTIPSVLEGKDVIAKAQTGTGKTLAFVLPILEK 63
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+ S + LIL PTRELA QI+ E +++N +GI L + GG
Sbjct: 64 IDVQKSD--------VQALILTPTRELALQISKEIKRMVENVEGIHTLAVYGGQDVAHQL 115
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
++L+ I+VATPGRLLDHI + + L ++MLV+DEAD +L +GF +V++I+
Sbjct: 116 KKLKGS-THIVVATPGRLLDHIRRGT---IELSTVQMLVIDEADQMLLMGFLPEVDDIIH 171
Query: 561 CLPRRRQSLLFSATMPKEL--------------VLKREHTYIDTVGLGSVETPVKIKQSC 606
RQ++LFSATMP E+ +K E +D + +ET + KQ+
Sbjct: 172 ETLSSRQTMLFSATMPNEIRSLAKKYMVEPEFIEVKAERVTVDEIKQVVIETTDRRKQAT 231
Query: 607 LVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKP 666
L+ +L++EH + I+FC T + L+ L E++
Sbjct: 232 LL-----------NLIQEH----RPFLAIIFCRTKVRAKKLHEALIASGYESDELHGDLT 276
Query: 667 QLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREG 726
Q R++ + FR +K LV ++V+ARG+D VT V IP D E Y+HR+GRTGR G
Sbjct: 277 QSKREKAMKRFREAKTQFLVATEVAARGLDVEGVTHVYNYDIPHDVESYVHRIGRTGRAG 336
Query: 727 KEGEGVLLLAPWEEYFL 743
+G + L+AP + FL
Sbjct: 337 GDGVAITLVAPKDMEFL 353
>gi|308160174|gb|EFO62674.1| ATP-dependent RNA helicase HAS1, putative [Giardia lamblia P15]
Length = 547
Score = 207 bits (527), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 163/505 (32%), Positives = 251/505 (49%), Gaps = 56/505 (11%)
Query: 362 GNGEKKEKREEEPILSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVV 421
G G+ + + +E I+++ F E +SP ++A+ A G+ MTR+QEA++ L G++
Sbjct: 13 GGGDAENAKYQE-IMTETPFSETSLSPFLLEAVDAMGHKNMTRIQEASIPVILSGRNMTA 71
Query: 422 KAKTGTGKSIAFLLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKN 481
KA TG+GKS+AFLLPAI+ + KA +L V++L PTRELA Q+ A L+
Sbjct: 72 KAHTGSGKSLAFLLPAIDLIHKA----NMKLHHGTGVIVLTPTRELALQLYNVATQLISA 127
Query: 482 HDGIGVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLD 541
+ I V +GGT + + L +++ATPGRL DH+ N G L ML+LD
Sbjct: 128 TN-ITVGLAIGGTSRQKEANHL-CKGASVVIATPGRLCDHLNNTPGFKTD--KLFMLILD 183
Query: 542 EADHLLDLGFRKDVENIVDCL--PRRRQSLLFSATMPKELVLKREHTYIDTVGLGSVETP 599
EAD LL+ GF++++E I+ L P+ RQ FSATM + L+ H +D L + T
Sbjct: 184 EADMLLEYGFQQELEAILRMLPGPKLRQVCFFSATMSDK-CLEVPHMEVDKETLVRINTD 242
Query: 600 VK--------IKQSCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLL 651
VK +Q ++ P E F +L+ +K D K+IVF S+ Y L
Sbjct: 243 VKSSAATRAHFEQGYIICPPEQRFLLLYTFMKRR----SDKKIIVFLSSRDSVEFYYEFL 298
Query: 652 REMKM-NVREMYSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPP 710
R + M ++ + Q R +F ++ +L+ ++V+ARG+D P + V+Q P
Sbjct: 299 RFIGMASILMLDGGMKQKQRMETYNKFCNAQSGVLLATNVAARGLDLPAIDYVIQFDPPE 358
Query: 711 DREQYIHRLGRT--GREGKEGEGVLLLAPWEEYFLDDLK---------DLPLDKLQLPHL 759
E YIHR GR G K+G G+L L E F+ LK + P DK+
Sbjct: 359 SVESYIHRAGRACRGDTNKKGVGLLFLMSHETKFISFLKAHNVSLFEFEFPADKI----- 413
Query: 760 NPEIQLQMDNHMAKIDNNVKEA--AYHAWLGYYNSIREIGRDKTTLVELANKFAQSIGLQ 817
+Q +M+N +A I ++A AY +++ Y S ++L +S GL
Sbjct: 414 -INVQAEMENLIATIYYLRRKAQNAYRSFISAYASHHLKKVFNVNKIDL-ECLGRSFGLT 471
Query: 818 RPPPLFRKTALKMGLKDIPGIRLRK 842
P + D+PGI L K
Sbjct: 472 EVPRV-----------DVPGISLYK 485
>gi|223998424|ref|XP_002288885.1| atp-dependent RNA helicase [Thalassiosira pseudonana CCMP1335]
gi|220975993|gb|EED94321.1| atp-dependent RNA helicase [Thalassiosira pseudonana CCMP1335]
Length = 518
Score = 207 bits (527), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 155/478 (32%), Positives = 248/478 (51%), Gaps = 38/478 (7%)
Query: 365 EKKEKREEEPILSQK----RFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAV 420
E+K+KR+ S + F +S LT AL+A G+ +MT++Q ++ A L GKD +
Sbjct: 2 EQKKKRKSSVDASDEGQDNTFASLPLSDLTQNALSAMGFTRMTQIQAMSIPALLSGKDLI 61
Query: 421 VKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALL- 479
AKTG+GK++AFLLP +E + A S +++ PTRELA QI L
Sbjct: 62 GAAKTGSGKTLAFLLPVVELLHNAKFGSRNG----TGAIVISPTRELAMQIYGVCKDLCT 117
Query: 480 --KNHDGIGVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKM 537
K+H G+ ++GG + + RL + I++ATPGRLLDH++N G R L
Sbjct: 118 SGKHHQTYGL--IIGGANRRTEAERL-AKGVNIVIATPGRLLDHLQNTKGFVFR--NLLA 172
Query: 538 LVLDEADHLLDLGFRKDVENIVDCLPRRRQSLLFSATMPKEL-------VLKREHTYIDT 590
V+DEAD +L+ GF D+ +I+ LP++RQ++LFSAT K++ + + Y++
Sbjct: 173 FVMDEADRILEQGFEDDLRSIIKALPKQRQTMLFSATQTKKVEDLARTAIDPKSAVYVEV 232
Query: 591 VGLGSVETPVKIKQSCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLL 650
++ T ++Q + P + F +L LK++ + K++VF S+ L
Sbjct: 233 PNETNLATAAGLEQGYVTVPSDQRFLLLFTFLKKN----KNKKIMVFFSSCNSVKFHSEL 288
Query: 651 LREMKMNVREMYSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPP 710
L + + V +++ R+ Q R +F L+ +DV+ARG+D P V ++Q P
Sbjct: 289 LNYIDIPVMDIHGRQKQQKRTTTFFQFCKQTTGTLLCTDVAARGLDIPAVDWIIQFDPPD 348
Query: 711 DREQYIHRLGRTGR-EGKEGEGVLLLAPWEEYFLDDLK--DLPLDKLQLPHL---NPEIQ 764
D ++YIHR+GRT R E +G +L L P E FL LK + L++ + P N + Q
Sbjct: 349 DPKEYIHRVGRTARGEKGKGRALLFLTPEETGFLRYLKAAKVTLNEYEFPMTKLANVQSQ 408
Query: 765 LQMDNHMAKIDNNVKEAAYHAWLGYY--NSIREIGRDKTTLVELANKFAQSIGLQRPP 820
LQ N AY ++L Y +S+R+I D +L +LA ++ G PP
Sbjct: 409 LQRLIEKNYYLNCAARDAYRSYLLAYTSHSLRDI-FDVHSL-DLA-AVGRAFGFTAPP 463
>gi|425745889|ref|ZP_18863923.1| DEAD/DEAH box helicase [Acinetobacter baumannii WC-323]
gi|425487035|gb|EKU53394.1| DEAD/DEAH box helicase [Acinetobacter baumannii WC-323]
Length = 619
Score = 207 bits (527), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 133/399 (33%), Positives = 209/399 (52%), Gaps = 30/399 (7%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
K F E + +AL G+ T VQE + A LEGKD +V ++TG+GK+ AFLLP +
Sbjct: 3 KTFAEFSLHETLQQALEGLGFTTPTPVQEQAIPAALEGKDLLVSSQTGSGKTAAFLLPTL 62
Query: 439 EAV--------LKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTL 490
A+ K + TQ +L++ PTRELA Q++ +AIA +++ G+ + +
Sbjct: 63 NALAGEDTFVPFKERMKAVTQPT----ILVISPTRELAQQVSQDAIAFVRHMKGVRIAAI 118
Query: 491 VGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLG 550
+GG F ++L+ Q++VATPGRLLD + + ++L ++ L++DEAD +LDLG
Sbjct: 119 MGGMPFGKQIQQLKG--AQVVVATPGRLLDLVNRRQ---IKLDKVESLIVDEADRMLDLG 173
Query: 551 FRKDVENIVDCLPRRRQSLLFSATMPKELVLKREHTYIDTVGLGSVETPVKIKQSCLVAP 610
F +D+E I + R Q+L+FSAT ++ E D + ++ET
Sbjct: 174 FSEDLEAIGELAANRNQTLMFSATFADRIIRLAERMMNDPQRI-AIETGHSTNTDVTQTL 232
Query: 611 H-----ELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRK 665
H E ++L H L + + + +VF ST T +L L E +V ++
Sbjct: 233 HWTDGFEHKKKLLTHWLSDESVD----QAVVFASTQEDTDMLAEELAEAGHSVVALHGAM 288
Query: 666 PQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGRE 725
PQ R+R R + ILV +DV+ARG+D P ++ V+ G+P E Y+HR+GRTGR
Sbjct: 289 PQTVRNRRLRSIREGRAKILVATDVAARGLDVPTISHVINFGLPMKNEDYVHRIGRTGRA 348
Query: 726 GKEGEGVLLLAPWEE---YFLDDLKDLPLDKLQLPHLNP 761
G+ G+ V L E L+D D L+ ++ L P
Sbjct: 349 GRTGQAVTLATYRERGKIRALEDYLDARLNVSEIEGLEP 387
>gi|322706811|gb|EFY98391.1| ATP-dependent RNA helicase mss116 [Metarhizium anisopliae ARSEF 23]
Length = 649
Score = 207 bits (527), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 143/370 (38%), Positives = 206/370 (55%), Gaps = 34/370 (9%)
Query: 399 YIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLVP---- 454
Y MT VQ T++ L+G D V +AKTGTGK++AFLLP ++ +++ + T+
Sbjct: 100 YEAMTPVQSKTINPALKGTDIVAQAKTGTGKTLAFLLPLLQRMIEEDPTLATRRASRSAR 159
Query: 455 --PIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILV 512
I ++L PTRELA QIAAEA L K + G+ V + VGGT R+ + C +LV
Sbjct: 160 SDDIRGIVLSPTRELAEQIAAEARRLTK-YTGLVVQSAVGGTHKGSMLRQTQRQGCHLLV 218
Query: 513 ATPGRLLDHIEN-KSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRR----RQ 567
ATPGRL D +++ +SG+ L LVLDEAD +LD+GF K++ I CLP R RQ
Sbjct: 219 ATPGRLNDLLQDPQSGIEA--PNLAALVLDEADRMLDVGFEKELGEITRCLPSRNEKTRQ 276
Query: 568 SLLFSATMPKELV-LKR------EHTYIDTVGLGSVETPVKIKQSCL-VAPHELHFQILH 619
++L SAT+P +++ L R + ++ T+ T ++ Q + +A F L
Sbjct: 277 TMLVSATIPDDVIRLARTMVRADDFEFVQTISENESLTHDRVPQHVVPLASWNNVFPSLF 336
Query: 620 HLLKEHIL------GTPDYKVIVFCSTG----MVTSLLYLLLRE--MKMNVREMYSRKPQ 667
L+ P +K IV+ +T M L + R MK + S+ Q
Sbjct: 337 ELIDRESAKAAEDRSLPPFKAIVYFNTTSLVEMGAELGFQRRRNGLMKTPTFSIQSQLTQ 396
Query: 668 LYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGK 727
R + ++ FR ++ +L +SDV+ARGMD+P+VT V+QV P DRE YIHRLGRT R+ K
Sbjct: 397 NQRTKAADMFRHARSGVLFSSDVTARGMDFPNVTHVIQVDTPRDRESYIHRLGRTARQNK 456
Query: 728 EGEGVLLLAP 737
GEG LLL P
Sbjct: 457 GGEGWLLLPP 466
>gi|301775045|ref|XP_002922942.1| PREDICTED: ATP-dependent RNA helicase DDX18-like [Ailuropoda
melanoleuca]
gi|281344914|gb|EFB20498.1| hypothetical protein PANDA_011982 [Ailuropoda melanoleuca]
Length = 669
Score = 207 bits (527), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 153/451 (33%), Positives = 245/451 (54%), Gaps = 41/451 (9%)
Query: 390 TIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSST 449
T++A+ G+ MT +Q ++ LEG+D + AKTG+GK++AFL+PA+E ++K
Sbjct: 189 TLRAIKEMGFTNMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPAVELIVK------ 242
Query: 450 TQLVP--PIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDP 507
+ +P VLIL PTRELA Q L+ +H L ++GG+ + ++L +
Sbjct: 243 LKFMPRNGTGVLILSPTRELAMQTFGVLKELMTHHVHTYGL-IMGGSNRSAEAQKL-GNG 300
Query: 508 CQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQ 567
I+VATPGRLLDH++N G + L+ LV+DEAD +LD+GF ++++ I+ LP RRQ
Sbjct: 301 INIIVATPGRLLDHMQNTPGFMYK--NLQCLVIDEADRILDVGFEEELKQIIKLLPTRRQ 358
Query: 568 SLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILHHL 621
++LFSAT ++ + LK+E Y+ + T ++Q +V P E F +L
Sbjct: 359 TMLFSATQTRKVEDLARISLKKEPLYVGVDDDKANATVDGLEQGYVVCPSEKRFLLLFTF 418
Query: 622 LKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEFRASK 681
LK++ K++VF S+ Y LL + + V ++ R+ Q R +F +
Sbjct: 419 LKKN----RKKKLMVFFSSCKSVKYHYELLNYIDLPVLAIHGRQKQNKRTTTFFQFCNAD 474
Query: 682 RLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEG--VLLLAPWE 739
IL+ +DV+ARG+D P+V +VQ P D ++YIHR+GRT R G G G +L+L P E
Sbjct: 475 SGILLCTDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTAR-GLNGRGHALLILRPEE 533
Query: 740 EYFLDDLKD--LPLDKLQLPHLN-PEIQLQMDNHMAKIDNNVKEAAYHAWLGYYNSIREI 796
FL LK +PL + + +IQ Q++ + K + + ++A A+ Y IR
Sbjct: 534 LGFLRYLKQSKVPLSEFEFSWSKISDIQSQLEKLIEK-NYFLHKSAQEAYKSY---IR-- 587
Query: 797 GRDKTTLVELAN-------KFAQSIGLQRPP 820
D +L ++ N + A S G + PP
Sbjct: 588 AYDSHSLKQIFNVNNLNLPQVALSFGFKVPP 618
>gi|188996905|ref|YP_001931156.1| DEAD/DEAH box helicase domain-containing protein
[Sulfurihydrogenibium sp. YO3AOP1]
gi|188931972|gb|ACD66602.1| DEAD/DEAH box helicase domain protein [Sulfurihydrogenibium sp.
YO3AOP1]
Length = 405
Score = 207 bits (527), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 141/374 (37%), Positives = 203/374 (54%), Gaps = 22/374 (5%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
K F + +S T+K+L GY + T +QE + A + GKD V +A+TGTGK+ AF +P +
Sbjct: 6 KTFKDLNLSKETLKSLDELGYSKPTEIQEKAIPAVMTGKDLVAQAQTGTGKTAAFGVPIV 65
Query: 439 EAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
E V + LIL PTRELA Q+A E L KN + L + GG
Sbjct: 66 EKVNPKQKK--------VQALILVPTRELAIQVAKEIKELGKNKK-VYTLAVYGGKSISH 116
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
L+ ++V TPGR+ D +E G+ + L +KM VLDEAD +L++GF D+E I
Sbjct: 117 QINFLKKGSDVVVVGTPGRVRDLLER--GV-LNLDNVKMFVLDEADRMLEMGFIDDIEEI 173
Query: 559 VDCLPRRRQSLLFSATMPKELV-LKRE--HTYIDTVGLGSVETPV-KIKQSCL-VAPHEL 613
+ LP RQ+LLFSATMPKE++ L E + +T+ + E V KIKQ V P +
Sbjct: 174 MSYLPEDRQNLLFSATMPKEILDLAEEFLNENYETIRVKPDEVTVEKIKQIIYRVNPRD- 232
Query: 614 HFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRI 673
F+ L +L ++ KVI+F T + L L E N ++ Q R+ +
Sbjct: 233 KFKKLTEVLSQN----EAEKVIIFTQTKIEADELAERLNEEGFNASAIHGDFSQKKRETV 288
Query: 674 SEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVL 733
FR K ILV +DV+ARG+D V V+ G+P D E YIHR+GRTGR G+EG +
Sbjct: 289 LHNFRTGKLKILVATDVAARGLDIKGVDLVINYGLPRDAESYIHRIGRTGRAGREGTAIS 348
Query: 734 LLAPWEEYFLDDLK 747
++ P E+ L +++
Sbjct: 349 IMTPSEDKQLQNIQ 362
>gi|356519202|ref|XP_003528262.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 27-like [Glycine
max]
Length = 690
Score = 207 bits (527), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 144/432 (33%), Positives = 232/432 (53%), Gaps = 28/432 (6%)
Query: 375 ILSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFL 434
I+S + F G+S T KA+ + +MT++Q + L G D + A+TG GK++AFL
Sbjct: 217 IMSTESFSSLGLSEPTSKAIADMSFHRMTQIQAKAIPTLLTGNDVLGAARTGAGKTLAFL 276
Query: 435 LPAIEAVLKATSSSTTQLVP--PIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVG 492
+PA+E + Q P V+++CPTRELA Q A A LLK H + + ++G
Sbjct: 277 VPAVELLY------NVQFTPRNGTGVVVICPTRELAIQTHAVAKELLKYH-SLTLGLVIG 329
Query: 493 GTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFR 552
G+ K + R+ +LVATPGRLLDH++N +G + LK L++DEAD +L+ F
Sbjct: 330 GSGRKGEAERIMKG-VNLLVATPGRLLDHLQNTNGFVYK--NLKCLMIDEADRILEANFE 386
Query: 553 KDVENIVDCLPRRRQSLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSC 606
++++ I++ LP++RQ+ LFSAT K+ L + YID T ++Q
Sbjct: 387 EEMKQIINILPKKRQTALFSATQTKKVKDLARLSFQTTPIYIDVDDGRKKVTNEGLQQGY 446
Query: 607 LVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKP 666
+V F +L+ L+ + KV+VF S+ LL+ ++ ++ ++
Sbjct: 447 VVVHCAKRFVVLYSFLRRY----QSKKVMVFFSSCNSVKFHADLLKCTGLDCLNIHGKQK 502
Query: 667 QLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGR-E 725
Q R F +++ IL+ +DV+ARG+D PDV +VQ P + ++YIHR+GRT R E
Sbjct: 503 QHARTTTFFNFCKAEKGILLCTDVAARGLDIPDVDWIVQFDPPDEPKEYIHRVGRTARGE 562
Query: 726 GKEGEGVLLLAPWEEYFLDDLK--DLPLDKLQLPHLN-PEIQLQMDNHMAKID--NNVKE 780
G +G +L L P E FL LK +P+ + H +Q Q++ +A I N + +
Sbjct: 563 GGKGNALLFLIPEELQFLHYLKAAKVPVKEYAFDHKKLANVQSQLEKLVAGIYHLNVMAK 622
Query: 781 AAYHAWLGYYNS 792
AY +++ YNS
Sbjct: 623 DAYRSYILAYNS 634
>gi|339007892|ref|ZP_08640466.1| DEAD-box ATP-dependent RNA helicase CshA [Brevibacillus
laterosporus LMG 15441]
gi|338775095|gb|EGP34624.1| DEAD-box ATP-dependent RNA helicase CshA [Brevibacillus
laterosporus LMG 15441]
Length = 506
Score = 207 bits (527), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 145/439 (33%), Positives = 235/439 (53%), Gaps = 30/439 (6%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F+E G+SP +++++ G+ + T +Q T+ L G+D + +A+TGTGK++AF +P IE
Sbjct: 4 FNELGLSPSVLRSISNMGFEEATPIQALTIPVALTGRDLIGQAQTGTGKTVAFGIPMIEK 63
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+ TSS+ Q + +L PTRELA Q++ E I L + GI L + GG
Sbjct: 64 I--DTSSNHIQGI------VLAPTRELAVQVSEELIKL-GQYTGIKTLPIYGGQDIMRQI 114
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
R L+ +P ++VATPGRL+DHI ++ +RL ++ LVLDEAD +L++GF +++E+I++
Sbjct: 115 RALKKNP-HVIVATPGRLIDHINRRT---IRLQNIQTLVLDEADEMLNMGFIEEIESILE 170
Query: 561 CLPRRRQSLLFSATMPKEL--VLKREHTYIDTVGLGSVETPV-KIKQSCLVAPHELHFQI 617
+P RQ+LLFSATMP+++ + +R + + + + E V I+Q + +L F +
Sbjct: 171 QIPDERQTLLFSATMPRQIESLAQRYLKNPEKITVKAKEVTVPNIEQVYMEVQEKLKFDV 230
Query: 618 LHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEF 677
+ LL + +P+ IVF T L L + + ++ Q RD + +F
Sbjct: 231 MTRLLD---IQSPEL-AIVFGRTKRRVDELSEALNKRGYSAEGIHGDLTQAKRDSVLRQF 286
Query: 678 RASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLAP 737
+ ILV +DV+ARG+D VT V IP D E Y+HR+GRTGR GK G +
Sbjct: 287 KEGTIDILVATDVAARGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAGKTGVATTFVTS 346
Query: 738 WEEYFLDDLKDLP------LDKLQLPHLNPEIQLQMDNHMAKIDNNVKEAAYHAWLGYYN 791
E LD L+ + + + +P L I+ + K+ + E Y + G
Sbjct: 347 RE---LDHLRMIEHVTKRKMSRRPVPTLTEAIEGAQRITVEKLLTVIGEENYRDYHGLAE 403
Query: 792 SIREIGRDKTTLVELANKF 810
++ + D TLV A K
Sbjct: 404 TLLQ-ETDSVTLVAAALKM 421
>gi|89096443|ref|ZP_01169336.1| ATP-dependent RNA helicase [Bacillus sp. NRRL B-14911]
gi|89089297|gb|EAR68405.1| ATP-dependent RNA helicase [Bacillus sp. NRRL B-14911]
Length = 543
Score = 207 bits (527), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 131/366 (35%), Positives = 201/366 (54%), Gaps = 19/366 (5%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F GIS I L A G + T VQE + LEG+D + +A+TGTGK++AF+LP +E
Sbjct: 24 FKHLGISDPLIHKLAAQGIDEPTAVQEKAIPIVLEGRDIIAQAQTGTGKTLAFILPILEK 83
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+ S+ +TQ LI+ PTRELA QI +E L+++ + VL + GG +
Sbjct: 84 I--DPSNGSTQ------ALIVTPTRELALQITSEVKKLIEDMPDLNVLAVYGGQDVEKQL 135
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
+L+ QI+VATPGRLLDH+ + V+L + LVLDEAD +L +GF ++E I+
Sbjct: 136 HKLQRQ-TQIVVATPGRLLDHLRRGT---VQLDEVSFLVLDEADQMLHIGFLNEMELIIS 191
Query: 561 CLPRRRQSLLFSATMPKEL--VLKREHTYIDTVGLGSVETPVK-IKQSCLVAPHELHFQI 617
P RQ++LFSATMP ++ + K+ +++ + P K I+Q +
Sbjct: 192 QTPASRQTMLFSATMPDDIRKLSKKHLKEPESIRIEKTFVPEKAIEQLAIFTTDRAKQNA 251
Query: 618 LHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEF 677
L ++E + I+FC T + LY L+ + + E++ Q R+++ ++F
Sbjct: 252 LISRIRED----RPFLAIIFCRTIRRATKLYDALKSQRFSCEELHGDLTQAKREKVMKKF 307
Query: 678 RASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLAP 737
R ++ L+ +DV+ARG+D VT V IP D E Y+HR+GRTGR GK+G V A
Sbjct: 308 RNAEIQFLIATDVAARGLDVEGVTHVYNYDIPQDSESYVHRIGRTGRAGKDGLAVTFYAE 367
Query: 738 WEEYFL 743
+E L
Sbjct: 368 KDEAAL 373
>gi|330448349|ref|ZP_08311997.1| DEAD/DEAH box helicase family protein [Photobacterium leiognathi
subsp. mandapamensis svers.1.1.]
gi|328492540|dbj|GAA06494.1| DEAD/DEAH box helicase family protein [Photobacterium leiognathi
subsp. mandapamensis svers.1.1.]
Length = 446
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 134/369 (36%), Positives = 207/369 (56%), Gaps = 21/369 (5%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F + G+ P +K + + + T +Q + + GKD + +KTG+GK++AFLLPA++
Sbjct: 3 FKDLGLDPRLLKKINHLAFDRATEIQHTAIPVAIAGKDILASSKTGSGKTLAFLLPAMQR 62
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+ + S T+ P V+IL PTRELA Q+ A+ L G L +VGG F
Sbjct: 63 MYR--SKPFTRRDP--RVVILTPTRELAKQVFAQLRTLNAGTPYDGTL-IVGGENFNDQV 117
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
+ L +DP +VATPGRL DH+E++S L GL+ML+LDEAD +LDLGF ++ I +
Sbjct: 118 KALRNDPM-FVVATPGRLADHLEHRS---THLDGLEMLILDEADRMLDLGFAPELRRINE 173
Query: 561 CL-PRRRQSLLFSATMPKELVLKREHTYIDT---VGLG-SVETPVKIKQSCLVAPHELHF 615
RRRQ+L+FSAT+ + V++ +D + +G S E I Q ++ H H
Sbjct: 174 AANHRRRQTLMFSATLDNQEVIEIASEMLDNPKRISIGHSAEEHKDITQRFILCDHLDHK 233
Query: 616 QILHHLLKEHILGTPDY-KVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRIS 674
Q L + +L T DY +VI+F +T T L L E K+ + Q R+ I
Sbjct: 234 QAL----LDKVLETTDYNQVIIFTATRADTDRLTNELNERKLKAVALSGNLNQNQRNSIM 289
Query: 675 EEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLL 734
+F + ILVT+D+++RG+D +V+ V+ +P E+Y+HR+GRTGR G +G+ V L
Sbjct: 290 SQFERNCHKILVTTDIASRGLDIDNVSLVINFDMPKHAEEYVHRVGRTGRAGNKGDAVSL 349
Query: 735 LAP--WEEY 741
+ P W+ +
Sbjct: 350 VGPKDWKSF 358
>gi|336471197|gb|EGO59358.1| hypothetical protein NEUTE1DRAFT_79371 [Neurospora tetrasperma FGSC
2508]
gi|350292283|gb|EGZ73478.1| ATP-dependent RNA helicase dbp-4 [Neurospora tetrasperma FGSC 2509]
Length = 823
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 129/368 (35%), Positives = 201/368 (54%), Gaps = 20/368 (5%)
Query: 380 RFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIE 439
+F + + T L A+ + +T VQ A + L+G+D + A+TG+GK++AFL+P +E
Sbjct: 58 KFSDLPLCEPTASGLRASHFEVLTDVQRAAIPLALKGQDILGAARTGSGKTLAFLVPVLE 117
Query: 440 AVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVD 499
+ +A + L LI+ PTRELA QI + +NH L ++GG K +
Sbjct: 118 KLYRARWTEYDGL----GALIISPTRELAVQIFEVLRKIGRNHSFSAGL-VIGGKSLKEE 172
Query: 500 QRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIV 559
RL ILV TPGR+L H++ +G V L+MLVLDEAD ++D+GF++ V+ +V
Sbjct: 173 AERLGR--MNILVCTPGRMLQHLDQTAGFDVD--NLQMLVLDEADRIMDMGFQQAVDALV 228
Query: 560 DCLPRRRQSLLFSATMPKEL-----VLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELH 614
+ LP+ RQ+LLFSAT K + + ++ Y+ + TPV ++Q +V P
Sbjct: 229 EHLPKSRQTLLFSATQSKRVSDLARLSLKDPEYVSVHEAAASATPVGLQQHYIVTPLPEK 288
Query: 615 FQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK--MNVREMYSRKPQLYRDR 672
L L+ ++ K+IVF S+G Y + M+ + + ++ R+ Q+ R
Sbjct: 289 LDTLWGFLRTNLKS----KIIVFMSSGKQVRFAYESFKRMQPGIPLLHLHGRQKQIARLE 344
Query: 673 ISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGV 732
I+ F ++K L +DV ARG+D+P V V+QV P D + YIHR+GRT R +G V
Sbjct: 345 ITNRFTSAKYSCLFATDVVARGVDFPAVDWVIQVDCPEDADTYIHRVGRTARYESKGRAV 404
Query: 733 LLLAPWEE 740
L L P EE
Sbjct: 405 LFLDPSEE 412
>gi|24642822|ref|NP_573230.1| CG5800 [Drosophila melanogaster]
gi|21429126|gb|AAM50282.1| RE19835p [Drosophila melanogaster]
gi|22832742|gb|AAF48747.2| CG5800 [Drosophila melanogaster]
gi|220948042|gb|ACL86564.1| CG5800-PA [synthetic construct]
Length = 826
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 155/504 (30%), Positives = 257/504 (50%), Gaps = 50/504 (9%)
Query: 352 RKEISKNKLNGNGEK----KEKREEEPILSQKRFDECGISPLTIKALTAAGYIQMTRVQE 407
R+EI+K++L + K K E + K+F + +S T KAL + ++ T+VQ
Sbjct: 41 RQEINKSRLAATEAEIQDLKTKYAEIDATAIKKFAQFPLSKKTQKALAESKFVHPTQVQR 100
Query: 408 ATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLVPPIYVLILCPTREL 467
++ L+GKD + A TG+GK++AFL+P +E + S T + +I+ PTREL
Sbjct: 101 DSIGPALQGKDVLGAAITGSGKTLAFLIPVLEHLFMNKWSRTDG----VGAIIISPTREL 156
Query: 468 ASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSG 527
A QI + K+HD L ++GG K ++ R+ D C IL+ TPGRLL H++
Sbjct: 157 AYQIFETLKKVGKHHDFSAGL-IIGGKNLKFERTRM--DQCNILICTPGRLLQHMDENPL 213
Query: 528 LSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQSLLFSATMPKEL-----VLK 582
+ M +MLVLDEAD LD+GF+K + +I++ P RQ+LLFSAT + +
Sbjct: 214 FNTSTM--EMLVLDEADRCLDMGFQKTLNSIIENFPPVRQTLLFSATQTNTVQDLARLNL 271
Query: 583 REHTYIDTVGLGSVETPVK----------------IKQSCLVAPHELHFQILHHLLKEHI 626
++ Y+ G E P ++QS +V E +L +K H+
Sbjct: 272 KDPVYVGYGGATPREEPSASTKKTPNTAVLAVPELLQQSYVVLNLEDKITMLWSFIKNHL 331
Query: 627 LGTPDYKVIVFCSTGMVTSLLYLLLREMKMN--VREMYSRKPQLYRDRISEEFRASKRLI 684
K+IVF ++ LY + +++ + +Y Q R I E+F ++
Sbjct: 332 ----KQKIIVFVASCKQAKYLYEIFCKLRPGSPLLALYGTLHQDRRIAIYEDFLRKSHVV 387
Query: 685 LVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLAPW-EEYFL 743
+ ++DV++RG+D+P V VVQ+ P D QYIHR GR+ R GE +L+L P EEY +
Sbjct: 388 MFSTDVASRGLDFPAVNWVVQLDCPEDVSQYIHRAGRSARNKTRGECLLVLTPSEEEYMI 447
Query: 744 DDLKDLPLDKLQLPHLNPE----IQLQMDNHMAKIDNNVKEAAYHAWLGYYNSIREIGRD 799
LK+ ++ ++P+ +++++ +A+ ++ A A+L Y S+ + R+
Sbjct: 448 SALKEQLNIDIRCVQIDPKKLFSPRVKIEAFLAQFP-ELRATAQRAFLSYIKSVF-LMRN 505
Query: 800 KTTLVELA---NKFAQSIGLQRPP 820
K + + FAQS+GL P
Sbjct: 506 KRLFNVFSLDLDAFAQSLGLAVTP 529
>gi|309774568|ref|ZP_07669594.1| ATP-dependent RNA helicase, DEAD/DEAH family [Erysipelotrichaceae
bacterium 3_1_53]
gi|308917683|gb|EFP63397.1| ATP-dependent RNA helicase, DEAD/DEAH family [Erysipelotrichaceae
bacterium 3_1_53]
Length = 585
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 126/361 (34%), Positives = 198/361 (54%), Gaps = 21/361 (5%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F+E IS +KA+ GY T +Q ++ +EGKD + ++ TGTGK+ AF +PAIE
Sbjct: 4 FNELQISSEVMKAVEEMGYENATDIQAQSIPLIMEGKDVLGRSNTGTGKTAAFGIPAIEK 63
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
V + T + LI+CPTREL +Q+A E K +G+ ++ + GG Q
Sbjct: 64 VCQGTRNPNA--------LIICPTRELVTQVATELRKFSKYKEGVKIVPIYGGQPID-RQ 114
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
+L C I+V TPGR++DH+ ++ ++L M++LDEAD +L++GF++D+E I+
Sbjct: 115 IQLLKRGCGIVVGTPGRIMDHLNRRT---LKLDDTNMVILDEADEMLNMGFKEDIEEILS 171
Query: 561 CLPR--RRQSLLFSATMPKELVLKREHTYIDTVGL---GSVETPVKIKQSCLVAPHELHF 615
+P Q++LFSAT P E++ + D V + S T ++Q AP
Sbjct: 172 MMPEGNEHQTVLFSATWPAEILRITKQFQNDPVRVEIKSSQRTIDTVEQIYYEAPRGKKA 231
Query: 616 QILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISE 675
L LL + PD ++FC+T + L L + + ++ Q +R R+ E
Sbjct: 232 NALRVLLSHY---DPDL-CMIFCNTKKMVDELCDELNKHDIKAISLHGDMKQEFRSRVME 287
Query: 676 EFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLL 735
+FR+ IL+ +DV+ARG+D D+ VV IP D E YIHR+GRTGR GK+G + L+
Sbjct: 288 QFRSGNYPILIATDVAARGIDVDDIDLVVNFDIPQDNEYYIHRVGRTGRAGKKGLAITLV 347
Query: 736 A 736
+
Sbjct: 348 S 348
>gi|406989076|gb|EKE08894.1| hypothetical protein ACD_16C00239G0015 [uncultured bacterium]
Length = 413
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 132/380 (34%), Positives = 211/380 (55%), Gaps = 22/380 (5%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F++ G++P T++A+ GY T +QE + LEG+D + A+TG+GK+ +F+LP ++
Sbjct: 3 FEKLGLNPKTLQAIAEVGYTSPTPIQEKAVPLLLEGRDIIALAQTGSGKTASFILPLLDL 62
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+ + + + LI+ PTRELA+Q+A + A+ H V L+GG F +
Sbjct: 63 LTRGRAKARMP-----RSLIMEPTRELAAQVADD-FAIYGKHYTFTVALLIGGESFGDQE 116
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
++L +L+ATPGRLLD + + L +KMLV+DEAD +LD+GF D+E I
Sbjct: 117 KKLLKG-VDVLIATPGRLLDLYDRGK---ILLNDVKMLVIDEADRMLDMGFIPDIERIAS 172
Query: 561 CLPRRRQSLLFSATMPKELVLKREHTYID-----TVGLGSVETPVKIKQSCLVAPHELHF 615
LP R Q+ LFSATMP E + K ++ T+ S + P I+Q + AP +
Sbjct: 173 LLPPR-QTALFSATMP-EPIRKLTQQFLKNPEEITISATS-KAPSLIEQFIVRAPEKEKR 229
Query: 616 QILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISE 675
+L LLK L ++V+VFC+ ++Y ++ V ++ Q R++ +
Sbjct: 230 DVLRSLLKAEDL----HQVLVFCNRKREVDIVYNSMKRYGFKVGALHGDITQSVRNKTLK 285
Query: 676 EFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLL 735
+F+ K +L+ SDV+ARG+D D+ V+ +P E YIHR+GRTGR GKEG+ L+
Sbjct: 286 DFKEGKIDLLIASDVAARGLDIEDLPGVINFHVPTTPEDYIHRIGRTGRAGKEGKAFTLV 345
Query: 736 APWEEYFLDDLKDLPLDKLQ 755
+P E +LD + K+Q
Sbjct: 346 SPHEGKYLDPILKTSQHKIQ 365
>gi|169852452|ref|XP_001832910.1| ATP-dependent RNA helicase HAS1 [Coprinopsis cinerea okayama7#130]
gi|116506045|gb|EAU88940.1| ATP-dependent RNA helicase HAS1 [Coprinopsis cinerea okayama7#130]
Length = 640
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 155/456 (33%), Positives = 243/456 (53%), Gaps = 33/456 (7%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F+ +S T++AL G+ MT +Q ++ L GKD + A+TG+GK++AFL+PA+E
Sbjct: 107 FNTLDLSEPTLRALKDMGFETMTSIQAKSIPVLLAGKDVLGAARTGSGKTLAFLIPAVEL 166
Query: 441 V--LKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHD-GIGVLTLVGGTRFK 497
+ LK + T ++ IL PTRELA QI A L+ H GV+ +GG K
Sbjct: 167 LHRLKFKPVNGTGII------ILTPTRELALQIFGVAKDLMAYHSQTFGVV--IGGANPK 218
Query: 498 VDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVEN 557
+ +L S +LVATPGRLLDH++N G R L+ LV+DEAD +L++GF ++++
Sbjct: 219 AEVDKL-SKGVNLLVATPGRLLDHLQNAKGFVYR--NLRALVIDEADRILEIGFEEEMKR 275
Query: 558 IVDCLPRR-RQSLLFSATMPKELV------LKREHTYIDTVGLGSVETPVKIKQSCLVAP 610
I+ LP RQS+LFSAT ++ L+ ++D + T + Q +V
Sbjct: 276 IISILPNENRQSMLFSATQTTKVTDLARISLRPGPVHVDVDKEEATSTVSTLSQGYVVCS 335
Query: 611 HELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYR 670
++ F++L+ LK+++ KVIVF S+ LL + + V +++ ++ Q+ R
Sbjct: 336 SDMRFRLLYTFLKKNL----KKKVIVFFSSCNSVKYHAELLNYIDVPVLDLHGKQKQMKR 391
Query: 671 DRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGE 730
EF ++ IL+ +DV+ARG+D P V +VQ P D YIHR+GRT R GK G+
Sbjct: 392 TNTFFEFINAESGILLCTDVAARGLDIPRVDWIVQFDPPDDPRDYIHRVGRTARAGKVGK 451
Query: 731 GVLLLAPWEEYFLDDLKD--LPLDKLQLPHLN-PEIQLQMDNHMAK---IDNNVKEAAYH 784
+L L E FL LKD +PL++ P IQ Q++ + K + + K+ +
Sbjct: 452 SLLFLLESELGFLRYLKDAKVPLNEYSFPAERIANIQTQLEKLLQKNYFLHKSAKD-GFR 510
Query: 785 AWLGYYNSIREIGRDKTTLVELANKFAQSIGLQRPP 820
++L Y S ++LA K +S G PP
Sbjct: 511 SYLQSYASYSLKKIYDVNKLDLA-KVGKSFGFATPP 545
>gi|160881936|ref|YP_001560904.1| DEAD/DEAH box helicase [Clostridium phytofermentans ISDg]
gi|160430602|gb|ABX44165.1| DEAD/DEAH box helicase domain protein [Clostridium phytofermentans
ISDg]
Length = 527
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 135/389 (34%), Positives = 207/389 (53%), Gaps = 26/389 (6%)
Query: 380 RFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIE 439
RFDE + I+A+ GY +MT +Q + LEGKD V +A+TGTGK+ AF +P ++
Sbjct: 4 RFDEMELQTPIIRAIEELGYEEMTPIQAQAIPVVLEGKDIVGQAQTGTGKTAAFSIPILQ 63
Query: 440 AVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVD 499
+ V + +ILCPTRELA Q++ E K GI + + GG
Sbjct: 64 KI--------DPKVKGLQAVILCPTRELAIQVSDEMHKFSKFMHGIKAIPIYGGQDITRQ 115
Query: 500 QRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIV 559
R L++ QI++ TPGR++DH+ K+ V+ + M+ LDEAD +L++GFR+D+E I+
Sbjct: 116 IRSLKAG-VQIVIGTPGRVMDHMRRKT---VKFDKVSMIALDEADEMLNMGFREDIETIL 171
Query: 560 DCLPRRRQSLLFSATMPKELV-----LKREHTYIDTVGLGSVETPVKIKQSCLVAPHELH 614
+P RQ+LLFSATMP+ ++ +++ T + V + P KI+Q +
Sbjct: 172 KEMPEDRQTLLFSATMPQPIMDIARTYQKDATIVKVVK-KELTVP-KIEQYYYEVRPKNK 229
Query: 615 FQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRIS 674
+L LL + +P + +VFC+T L L ++ Q RDR+
Sbjct: 230 VDVLSRLLDMY---SPK-RCLVFCNTKRQVDELVTALSGRGFFAEGLHGDLKQQQRDRVM 285
Query: 675 EEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLL 734
FR K ILV +DV+ARG+D DV +V +P D E Y+HR+GRTGR G+ G L
Sbjct: 286 SSFRTGKAEILVATDVAARGIDVDDVEAVFNYDVPQDEEYYVHRIGRTGRAGRTGRAFTL 345
Query: 735 LAPWEEYFLDDLKDLPLDKLQ---LPHLN 760
+ E Y L D++ K++ +P +N
Sbjct: 346 VVGKEVYKLRDIQRYCKTKIKVMPIPSVN 374
>gi|310641357|ref|YP_003946115.1| DEAD/DEAH box helicase [Paenibacillus polymyxa SC2]
gi|386040399|ref|YP_005959353.1| DEAD-box ATP-dependent RNA helicase ydbR [Paenibacillus polymyxa
M1]
gi|309246307|gb|ADO55874.1| DEAD/DEAH box helicase domain-containing protein [Paenibacillus
polymyxa SC2]
gi|343096437|emb|CCC84646.1| DEAD-box ATP-dependent RNA helicase ydbR [Paenibacillus polymyxa
M1]
Length = 525
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 133/363 (36%), Positives = 195/363 (53%), Gaps = 22/363 (6%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F E + P I+A+T G+ + T +Q ++ L+GKD + +A+TGTGK+ AF +P I
Sbjct: 4 FAEFDLEPKVIQAITELGFEEATPIQSKSIPIALQGKDMIGQAQTGTGKTAAFGIPMINK 63
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+ K I LI+ PTRELA Q+A E I L G+ L + GG
Sbjct: 64 ISKNDEK--------IRALIMAPTRELAIQVAEE-IEKLSRFKGLRTLPIYGGQDIVRQI 114
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
R L+ P QI++ TPGRLLDHI K+ ++L + +VLDEAD +LD+GF +D+++I+
Sbjct: 115 RALKKKP-QIIIGTPGRLLDHINRKT---IKLEDVNTVVLDEADEMLDMGFMEDIQSILK 170
Query: 561 CLPRRRQSLLFSATMPKELVLKREHTYID----TVGLGSVETPVKIKQSCLVAPHELHFQ 616
+P RQ++LFSATMP + E D +V V P+ I Q+ + P F+
Sbjct: 171 QVPDERQTMLFSATMPPNIKRLAEQFLKDPEHVSVIPKQVSAPL-IDQAYIEVPERQKFE 229
Query: 617 ILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEE 676
L L+ + +P+ IVF T L L++ + ++ Q RD + +
Sbjct: 230 ALSRLID---MESPEL-AIVFGRTKRRVDELAEALQKRGYSADGLHGDLSQNQRDAVMRK 285
Query: 677 FRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLA 736
FR +LV +DV+ARG+D VT VV +P D E Y+HR+GRTGR GKEGE +
Sbjct: 286 FRDGSIDVLVATDVAARGLDVSGVTHVVNFDLPQDPESYVHRIGRTGRAGKEGEAWSFVT 345
Query: 737 PWE 739
P E
Sbjct: 346 PRE 348
>gi|182415515|ref|YP_001820581.1| DEAD/DEAH box helicase [Opitutus terrae PB90-1]
gi|177842729|gb|ACB76981.1| DEAD/DEAH box helicase domain protein [Opitutus terrae PB90-1]
Length = 594
Score = 207 bits (526), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 137/402 (34%), Positives = 215/402 (53%), Gaps = 44/402 (10%)
Query: 376 LSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLL 435
+ ++ F E G+SP ++A+ G+ + +Q A + L G+D V + TG+GK++AF +
Sbjct: 1 MEKRPFAELGLSPEILRAVDKMGFEEAAPIQAAVIPTVLGGRDVVGVSSTGSGKTVAFAI 60
Query: 436 PAIEAV---LKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVG 492
PA+E V L+A + VL+LCPTRELA Q+A E L + GI + + G
Sbjct: 61 PALERVDPKLRA-----------VQVLVLCPTRELAVQVAEEMGHLAQFKRGIMGVPIYG 109
Query: 493 GTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFR 552
G ++ R L + Q+++ TPGR++DH+E + ++L LK++VLDEAD +LD+GFR
Sbjct: 110 GQSYERQYRALAAG-SQVVIGTPGRVMDHMERGT---LKLGALKLVVLDEADRMLDMGFR 165
Query: 553 KDVENIVDCLPRRRQSLLFSATMPKELVLKREHTYIDTVGLGSVETPVKIKQSCLVAPH- 611
+D+E I+ +P RQ L FSATMP+ + + T D +KI+ AP
Sbjct: 166 EDIEKILSAVPVPRQLLFFSATMPRPIQELIKRTARDPAW-------IKIEAVAQNAPQV 218
Query: 612 -ELHFQI--------LHHLLKEHILGTPDYKV-IVFCSTGMVTSLLYLLLREMKMNVREM 661
+++F++ L L+ H D++ IVFCST ++ L L V +
Sbjct: 219 EQIYFEVDRRSKLEALTRLIDVH-----DFRYGIVFCSTKVMVDDLDEHLHARGYAVDRL 273
Query: 662 YSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGR 721
+ Q RDR+ ++FR L+ +DV+ARG+D D+ V +P D E Y HR+GR
Sbjct: 274 HGDLSQTQRDRVMDKFRRRGFEFLIATDVAARGLDVDDLEVVFNYDLPNDAEDYTHRIGR 333
Query: 722 TGREGKEGEGVLLLAPWEEYFLDDL---KDLPLDKLQLPHLN 760
TGR GK G ++ E Y L + L L + +LP L+
Sbjct: 334 TGRAGKSGRAFTFVSGQEIYKLQAMVRWAKLDLRRGRLPSLD 375
>gi|335356475|ref|ZP_08548345.1| ATP-dependent RNA helicase [Lactobacillus animalis KCTC 3501]
Length = 503
Score = 207 bits (526), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 142/367 (38%), Positives = 196/367 (53%), Gaps = 20/367 (5%)
Query: 380 RFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIE 439
+FDE G+S +KA+ +G+ + T +QEAT+ L GKD + +A+TGTGK+ AF LP +E
Sbjct: 2 KFDELGLSEDLLKAVKRSGFEEATPIQEATIPLVLAGKDVIGQAQTGTGKTAAFGLPILE 61
Query: 440 AVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVD 499
V + I +I+ PTRELA Q E L K+ V + GG +
Sbjct: 62 HVDPKEHA--------IQAIIISPTRELAIQTQEELYRLGKDKRA-RVQVVYGGADIR-R 111
Query: 500 QRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIV 559
Q +L +P QILV TPGRLLDHI K+ V L +KMLVLDEAD +LD+GF D+E I+
Sbjct: 112 QIKLLKNPPQILVGTPGRLLDHINRKT---VDLSKVKMLVLDEADEMLDMGFLDDIEKII 168
Query: 560 DCLPRRRQSLLFSATMPKELVLKREH--TYIDTVGLGSVETPVKIKQSCLVAPHELH-FQ 616
+P +RQ+LLFSATMPK ++ E T + V + + E + V + F
Sbjct: 169 SNVPGQRQTLLFSATMPKAILRIGEKFMTEPEVVKIKAKELTTDLVDQYFVKVRDYEKFD 228
Query: 617 ILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEE 676
I+ +L + P+ IVF T L L N ++ Q R I +
Sbjct: 229 IMTRILD---VQAPEL-TIVFGRTKRRVDELSKGLEARGYNAAGIHGDLSQQRRMSILKR 284
Query: 677 FRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLA 736
F+ K ILV +DV+ARG+D VT V IP D E Y+HR+GRTGR G+ G V +
Sbjct: 285 FKEGKLDILVATDVAARGLDISGVTHVYNYDIPQDPESYVHRIGRTGRAGRHGVSVTFVT 344
Query: 737 PWEEYFL 743
P E +L
Sbjct: 345 PNEMDYL 351
>gi|62630202|gb|AAX88947.1| unknown [Homo sapiens]
Length = 546
Score = 207 bits (526), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 153/451 (33%), Positives = 244/451 (54%), Gaps = 41/451 (9%)
Query: 390 TIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSST 449
T+KA+ G+ MT +Q ++ LEG+D + AKTG+GK++AFL+PA+E ++K
Sbjct: 66 TLKAIKEMGFTNMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPAVELIVKL----- 120
Query: 450 TQLVP--PIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDP 507
+ +P VLIL PTRELA Q L+ +H L ++GG+ + ++L +
Sbjct: 121 -RFMPRNGTGVLILSPTRELAMQTFGVLKELMTHHVHTYGL-IMGGSNRSAEAQKL-GNG 177
Query: 508 CQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQ 567
I+VATPGRLLDH++N G + L+ LV+DEAD +LD+GF ++++ I+ LP RRQ
Sbjct: 178 INIIVATPGRLLDHMQNTPGFMYK--NLQCLVIDEADRILDVGFEEELKQIIKLLPTRRQ 235
Query: 568 SLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILHHL 621
++LFSAT ++ + LK+E Y+ + T ++Q +V P E F +L
Sbjct: 236 TMLFSATQTRKVEDLARISLKKEPLYVGVDDDKANATVDGLEQGYVVCPSEKRFLLLFTF 295
Query: 622 LKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEFRASK 681
LK++ K++VF S+ M Y LL + + V ++ ++ Q R +F +
Sbjct: 296 LKKN----RKKKLMVFFSSCMSVKYHYELLNYIDLPVLAIHGKQKQNKRTTTFFQFCNAD 351
Query: 682 RLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEG--VLLLAPWE 739
L+ +DV+ARG+D P+V +VQ P D ++YIHR+GRT R G G G +L+L P E
Sbjct: 352 SGTLLCTDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTAR-GLNGRGHALLILRPEE 410
Query: 740 EYFLDDLKD--LPLDKLQLPHLN-PEIQLQMDNHMAKIDNNVKEAAYHAWLGYYNSIREI 796
FL LK +PL + +IQ Q++ + K + + ++A A+ Y IR
Sbjct: 411 LGFLRYLKQSKVPLSEFDFSWSKISDIQSQLEKLIEK-NYFLHKSAQEAYKSY---IR-- 464
Query: 797 GRDKTTLVELAN-------KFAQSIGLQRPP 820
D +L ++ N + A S G + PP
Sbjct: 465 AYDSHSLKQIFNVNNLNLPQVALSFGFKVPP 495
>gi|330999043|ref|ZP_08322768.1| cold-shock DEAD-box protein A [Parasutterella excrementihominis YIT
11859]
gi|329575785|gb|EGG57311.1| cold-shock DEAD-box protein A [Parasutterella excrementihominis YIT
11859]
Length = 586
Score = 207 bits (526), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 154/450 (34%), Positives = 231/450 (51%), Gaps = 34/450 (7%)
Query: 376 LSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLL 435
+S F E G+S + +L++ G+ + T +Q + LEG+D + +A TGTGK+ AF L
Sbjct: 1 MSANPFLELGLSEKLVNSLSSLGFEEPTPIQTKAIPVLLEGRDVLGQAATGTGKTAAFSL 60
Query: 436 PAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTR 495
P I+ T Q VLIL PTREL Q++ EAI G+ VL + GG
Sbjct: 61 PLIQRYCLDTEPGKPQ------VLILTPTRELCIQVS-EAINSFARSSGVYVLPVYGGQD 113
Query: 496 FKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDV 555
+ + L S QI+VATPGR LDHI + + L +K +VLDEAD +LD+GF +D+
Sbjct: 114 YSRQIKAL-SRGVQIVVATPGRALDHIRRGT---LNLTEIKAVVLDEADEMLDMGFAEDL 169
Query: 556 ENIVDCLPRRRQSLLFSATMPKELVLKRE-------HTYIDTVGLGSVETPVKIKQSCLV 608
E I LP +RQ+ LFSAT+P ++ E H I + E P K+KQS +
Sbjct: 170 EAIFAALPEKRQTALFSATLPPKIAKIAENHLHDAFHILIPKEKVPEGEQP-KVKQSAYI 228
Query: 609 APHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQL 668
L +L + +P IVF T L LR +V ++ Q
Sbjct: 229 VGRNHKTAALGRILD---IESPRL-AIVFARTRNEVDELAESLRGRGYSVEPLHGGLDQA 284
Query: 669 YRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKE 728
RDR+ + RA + ++V +DV+ARG+D +T V+ GIP E Y+HR+GRTGR G+E
Sbjct: 285 QRDRVMKRARAEQVDVIVATDVAARGIDIDHLTHVINFGIPSSAETYVHRIGRTGRAGRE 344
Query: 729 GEGVLLLAPWEEYFLDDLKDLPLDKLQLPHLNPEIQLQMDNHMAKID---NNVKEAAYH- 784
G + +L P E L +++ L K+ L + D H ++D +++ E +
Sbjct: 345 GTAITILEPRESRLLKNIERLTKRKITL----LSVPTATDVHAKRLDLTRSSIHEILVNE 400
Query: 785 AWLGYYNSIREIGRDKTTLVELAN---KFA 811
+ LG Y S+ E D+ ++++A KFA
Sbjct: 401 SDLGKYRSVVENLADEFDILDVAAAAVKFA 430
>gi|421871323|ref|ZP_16302945.1| DEAD-box ATP-dependent RNA helicase CshA [Brevibacillus
laterosporus GI-9]
gi|372459950|emb|CCF12494.1| DEAD-box ATP-dependent RNA helicase CshA [Brevibacillus
laterosporus GI-9]
Length = 506
Score = 207 bits (526), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 144/436 (33%), Positives = 234/436 (53%), Gaps = 24/436 (5%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F+E G+SP +++++ G+ + T +Q T+ L G+D + +A+TGTGK++AF +P IE
Sbjct: 4 FNELGLSPSVLRSISNMGFEEATPIQALTIPVALTGRDLIGQAQTGTGKTVAFGIPMIEK 63
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+ TSS+ Q + +L PTRELA Q++ E I L + GI L + GG
Sbjct: 64 I--DTSSNHIQGI------VLAPTRELAVQVSEELIKL-GQYTGIKTLPIYGGQDIMRQI 114
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
R L+ +P ++VATPGRL+DHI ++ +RL ++ LVLDEAD +L++GF +++E+I++
Sbjct: 115 RALKKNP-HVIVATPGRLIDHINRRT---IRLQNIQTLVLDEADEMLNMGFIEEIESILE 170
Query: 561 CLPRRRQSLLFSATMPKEL--VLKREHTYIDTVGLGSVETPV-KIKQSCLVAPHELHFQI 617
+P RQ+LLFSATMP+++ + +R + + + + E V I+Q + +L F +
Sbjct: 171 QIPDERQTLLFSATMPRQIESLAQRYLKNPEKITVKAKEVTVPNIEQVYMEVQEKLKFDV 230
Query: 618 LHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEF 677
+ LL + +P+ IVF T L L + + ++ Q RD + +F
Sbjct: 231 MTRLLD---IQSPEL-AIVFGRTKRRVDELSEALNKRGYSAEGIHGDLTQAKRDSVLRQF 286
Query: 678 RASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLAP 737
+ ILV +DV+ARG+D VT V IP D E Y+HR+GRTGR GK G +
Sbjct: 287 KEGTIDILVATDVAARGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAGKTGVATTFVTS 346
Query: 738 WEEYFLDDLKDLPLDKLQ---LPHLNPEIQLQMDNHMAKIDNNVKEAAYHAWLGYYNSIR 794
E L ++ + K+ +P L I+ + K+ + E Y + G ++
Sbjct: 347 REIDHLRMIEHVTKRKMSRRPVPTLTEAIEGAQRITVEKLLTVIGEENYRDYHGLAETLL 406
Query: 795 EIGRDKTTLVELANKF 810
+ D TLV A K
Sbjct: 407 Q-ETDSVTLVAAALKM 421
>gi|451936748|ref|YP_007460602.1| superfamily II DNA and RNA helicase [Candidatus
Kinetoplastibacterium oncopeltii TCC290E]
gi|451777671|gb|AGF48646.1| superfamily II DNA and RNA helicase [Candidatus
Kinetoplastibacterium oncopeltii TCC290E]
Length = 478
Score = 207 bits (526), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 129/369 (34%), Positives = 202/369 (54%), Gaps = 24/369 (6%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F++ GIS AL AG++ T VQEAT+ L GKD +V A+TG+GK+ AF+LP ++
Sbjct: 3 FEKIGISSNIFSALKTAGFVSPTPVQEATIPQALSGKDLIVSAQTGSGKTAAFMLPILQI 62
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+ + S+ + P VL+L PTRELA QI + N + + T+VGG ++ +Q
Sbjct: 63 LSQKPKSNN---INP-QVLVLTPTRELALQITKATASYGINMPWLRIATIVGGMPYR-EQ 117
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
+ S ILVATPGRL+D + + V L G+++LVLDEAD +LD+GF +D+E IV
Sbjct: 118 IKALSKRVDILVATPGRLIDQMRSNK---VSLAGIQILVLDEADRMLDMGFIEDIETIVK 174
Query: 561 CLPRRRQSLLFSAT-------MPKELVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHEL 613
PR RQ++LFSAT + K+++ +H + + S + I Q A +
Sbjct: 175 NTPRDRQTMLFSATIDESIDRLAKKMMNSPQHISLTS----SKQKHDNITQKLFYADNNE 230
Query: 614 H-FQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDR 672
H ++L+H+L E L + I+F ST L L + +V ++ Q R R
Sbjct: 231 HKVKLLNHVLNEASLD----QAIIFTSTKKGADKLAECLSDSGFSVAALHGDMNQRQRTR 286
Query: 673 ISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGV 732
+ + + +LV +D++ARG+D ++ V +P E Y+HR+GRTGR G+ G +
Sbjct: 287 TISQLQKKQIRVLVATDIAARGIDINGISHAVNFDLPMQAEDYVHRIGRTGRAGRNGSAL 346
Query: 733 LLLAPWEEY 741
L+ E +
Sbjct: 347 SLVTNEERH 355
>gi|426194090|gb|EKV44022.1| hypothetical protein AGABI2DRAFT_153325 [Agaricus bisporus var.
bisporus H97]
Length = 828
Score = 207 bits (526), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 151/469 (32%), Positives = 244/469 (52%), Gaps = 37/469 (7%)
Query: 374 PILSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAF 433
P K F IS T + L +++MT +Q ++ L+GKD + A+TG+GK++AF
Sbjct: 49 PPADLKLFAGLPISENTKRGLKKGFFVEMTDIQAKSIPVSLKGKDVLGAARTGSGKTLAF 108
Query: 434 LLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGG 493
L+P +EA+ + + V + LI+ PTRELA QI E + + + ++GG
Sbjct: 109 LIPVLEALYRRKWGA----VDGLGALIISPTRELAVQIF-EVLRSIGGYHTFSAGLVIGG 163
Query: 494 TRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRK 553
K ++ RL ILVATPGRLL H++ G L+MLVLDEAD +LD+GF++
Sbjct: 164 KNLKDEKDRLSR--MNILVATPGRLLQHMDQTFGFDAD--NLQMLVLDEADRILDMGFQR 219
Query: 554 DVENIVDCLPRRRQSLLFSATMPKE------LVLKREHTY-IDTVG--LGSVETPVKIKQ 604
+ ++ LP+ RQ+LLFSAT + L LK + I + G G P ++Q
Sbjct: 220 TLSALLSHLPKSRQTLLFSATQTQSVNDLARLSLKEPVSIGISSPGEATGDTYIPATLEQ 279
Query: 605 SCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVR--EMY 662
+V+ + IL +K H+ K +VF S +Y M + ++
Sbjct: 280 HYVVSDLDKKLDILWSFIKTHL----QCKTLVFMSACKQVRFVYETFCRMHPGIPLIHLH 335
Query: 663 SRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRT 722
++ Q R + +F +K +L +D++ARG+D+P V VVQ+ P D E YIHR+GRT
Sbjct: 336 GKQKQSARLTMFNKFATTKHAVLFATDIAARGLDFPSVDWVVQLDAPEDVETYIHRVGRT 395
Query: 723 GREGKEGEGVLLLAPWEEYFLDDL---KDLPLDKLQLPHLNPEIQLQMDNHMAKI---DN 776
R +G+G+L+L P EE + + K L ++K++ + P ++N + K+ D
Sbjct: 396 ARYESKGKGLLMLCPSEEEGMTAVLEKKGLEVNKIK---IRPSKTQNIENQLQKLAFQDP 452
Query: 777 NVKEAAYHAWLGYYNSIREIGRDKTT--LVEL-ANKFAQSIGLQRPPPL 822
+K A A++ Y SI + + K+ + EL +FA+S+GL P +
Sbjct: 453 EIKYLAQRAFVSYLRSIY-LQKHKSVFKIDELPVERFAESLGLPGAPKI 500
>gi|149180848|ref|ZP_01859350.1| ATP-dependent RNA helicase, DEAD/DEAH box family protein [Bacillus
sp. SG-1]
gi|148851367|gb|EDL65515.1| ATP-dependent RNA helicase, DEAD/DEAH box family protein [Bacillus
sp. SG-1]
Length = 496
Score = 207 bits (526), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 133/384 (34%), Positives = 207/384 (53%), Gaps = 23/384 (5%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F GIS I+ L T +QE + A ++GKD + +A+TGTGK++AF+LP IE
Sbjct: 4 FKSLGISEAVIERLQKENVTTPTPIQEKAIPAVIKGKDVIAQAQTGTGKTLAFILPIIEN 63
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
S I LI+ PTRELA QI E L+++ +GI VL + GG +
Sbjct: 64 FDFNQQS--------IQALIVTPTRELALQITEEVRKLIRHIEGISVLPVYGGQDVEKQL 115
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
+L + I+V TPGR+LDHI + + L L LVLDEAD +L +GF K+VE I+
Sbjct: 116 NKLRKN-VGIVVGTPGRILDHIGRGT---IDLSELNSLVLDEADQMLHIGFLKEVEMIIR 171
Query: 561 CLPRRRQSLLFSATMPKEL-VLKREHTYI-DTVGLGSVETPVK-IKQSCLVAPHELHFQI 617
P+ RQ+LLFSAT+P E+ L ++H + + + + P K ++Q +
Sbjct: 172 ETPKTRQTLLFSATIPDEIKTLAKKHMKSPEYISVERKQGPAKSVEQKAVFVNDRAKQAT 231
Query: 618 LHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEF 677
L ++KE+ Y ++FC T + LY L E++ Q R+++ + F
Sbjct: 232 LIEMIKEY----RPYLAVIFCRTKRRVTKLYEALASEGFMCDELHGDLSQAKREKVMKRF 287
Query: 678 RASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLAP 737
R ++ +L+ +DV+ARG+D +T V IP D + Y+HR+GRTGR G++G V +P
Sbjct: 288 RDAEFQLLIATDVAARGLDVEGITHVFNYDIPEDADSYVHRIGRTGRAGEKGLAVTFYSP 347
Query: 738 WEEYFLDDL-KDLPLDKLQLPHLN 760
++ L ++ K+L ++LP N
Sbjct: 348 QQKDQLAEIEKEL---NIRLPKQN 368
>gi|195567377|ref|XP_002107237.1| GD15676 [Drosophila simulans]
gi|194204642|gb|EDX18218.1| GD15676 [Drosophila simulans]
Length = 825
Score = 207 bits (526), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 156/504 (30%), Positives = 254/504 (50%), Gaps = 50/504 (9%)
Query: 352 RKEISKNKLNGN----GEKKEKREEEPILSQKRFDECGISPLTIKALTAAGYIQMTRVQE 407
R+EI+K++L E K K E + K+F + +S T KAL + ++ T+VQ
Sbjct: 41 RQEINKSRLAATEAEIQELKTKYAEIDATAIKKFAQFPLSKKTQKALAESKFVHPTQVQR 100
Query: 408 ATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLVPPIYVLILCPTREL 467
++ L+GKD + A TG+GK++AFL+P +E + S T + +I+ PTREL
Sbjct: 101 DSIGPALQGKDVLGAAITGSGKTLAFLIPVLEHLFMNKWSRTDG----VGAIIISPTREL 156
Query: 468 ASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSG 527
A QI + K+HD L ++GG K ++ R+ D C I + TPGRLL H++
Sbjct: 157 AYQIFETLKKVGKHHDFSAGL-IIGGKNLKFERTRM--DQCNIXICTPGRLLQHMDENPL 213
Query: 528 LSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQSLLFSATMPKELVLKREHTY 587
+ M +MLVLDEAD LD+GF+K + +I++ P RQ+LLFSAT +
Sbjct: 214 FNTSTM--EMLVLDEADRCLDMGFQKTLNSIIENFPPARQTLLFSATQTNTVQDLARLNL 271
Query: 588 IDTVGLGS---------------------VETPVKIKQSCLVAPHELHFQILHHLLKEHI 626
D V +G + P ++QS +V E +L +K H+
Sbjct: 272 KDPVYVGYGGATPGEEPNASTKKAPNTAVLAVPELLQQSYVVLNLEDKITMLWSFIKNHL 331
Query: 627 LGTPDYKVIVFCSTGMVTSLLYLLLREMKMN--VREMYSRKPQLYRDRISEEFRASKRLI 684
K+IVF S+ LY + +++ + +Y Q R I E+F ++
Sbjct: 332 ----KQKIIVFVSSCKQAKYLYEIFCKLRPGSPLLALYGTLHQDRRIAIYEDFLRKSHVV 387
Query: 685 LVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLAPW-EEYFL 743
+ ++DV++RG+D+P V VVQ+ P D QYIHR GR+ R GE +L+L P EEY +
Sbjct: 388 MFSTDVASRGLDFPAVNWVVQLDCPEDVSQYIHRAGRSARNKTRGECLLVLTPSEEEYMI 447
Query: 744 DDLKDLPLDKLQLPHLNPE----IQLQMDNHMAKIDNNVKEAAYHAWLGYYNSIREIGRD 799
LK+ ++ ++P+ +++++ +A+ ++ A A+L Y S+ + R+
Sbjct: 448 SALKEQLNIDIRCVQIDPKKLFSPRVKIEAFLAQFP-ELRATAQRAFLSYIKSVF-LMRN 505
Query: 800 KTTLVELA---NKFAQSIGLQRPP 820
K + + FAQS+GL P
Sbjct: 506 KRLFNVFSLDLDAFAQSLGLAVTP 529
>gi|307729080|ref|YP_003906304.1| DEAD/DEAH box helicase [Burkholderia sp. CCGE1003]
gi|307583615|gb|ADN57013.1| DEAD/DEAH box helicase domain protein [Burkholderia sp. CCGE1003]
Length = 487
Score = 207 bits (526), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 134/383 (34%), Positives = 209/383 (54%), Gaps = 17/383 (4%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
FD+ G++P +KA+ +GY T +Q + L G+D + A+TGTGK+ +F LP I+
Sbjct: 13 FDQFGLAPDILKAVKESGYTTPTPIQAQAIPVVLAGRDVMGAAQTGTGKTASFSLPIIQR 72
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+L S+S + P+ LIL PTRELA Q+AA A K H + + GG
Sbjct: 73 LLPQASTSASPARHPVRALILTPTRELADQVAANVQAYAK-HTALRSAVVFGGVDMNPQS 131
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
+L +IL+ATPGRLLDH++ K+ L +++LVLDEAD +LD+GF D++ I++
Sbjct: 132 EQLRRG-VEILIATPGRLLDHVQQKTA---NLGQVQILVLDEADRMLDMGFLPDLQRILN 187
Query: 561 CLPRRRQSLLFSATMPKELVLKREHTYI---DTVGLG-SVETPVKIKQSCLVAPHELHFQ 616
LP+ RQ+LLFSAT E + K TY+ T+ + S T + Q
Sbjct: 188 LLPKERQTLLFSATFSGE-IKKLAATYLRNPQTIEVARSNSTATNVTQIVYEVAEGDKTG 246
Query: 617 ILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEE 676
+ L++E L +VIVFC++ + S L L + ++ + Q R + +
Sbjct: 247 AVVQLIRERSL----KQVIVFCNSKIGASRLARSLERDGVVATAIHGDRSQNERMQALDA 302
Query: 677 FRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLA 736
F+ + LV +DV+ARG+D ++ +V+ +P + E Y+HR+GRTGR G G+ + L +
Sbjct: 303 FKRGEIEALVATDVAARGLDIAELPAVINFDLPFNAEDYVHRIGRTGRAGASGDALSLCS 362
Query: 737 PWEEYFLDDLKDL---PLDKLQL 756
P E L D++ L PLD +L
Sbjct: 363 PNERKQLADIEKLIKRPLDVQRL 385
>gi|223937455|ref|ZP_03629359.1| DEAD/DEAH box helicase domain protein [bacterium Ellin514]
gi|223893806|gb|EEF60263.1| DEAD/DEAH box helicase domain protein [bacterium Ellin514]
Length = 645
Score = 207 bits (526), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 134/394 (34%), Positives = 205/394 (52%), Gaps = 41/394 (10%)
Query: 376 LSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLL 435
++ K F E G+S KA+ G+ Q + +Q + L+G+D V +++TG+GK+ AF +
Sbjct: 1 MTTKLFSELGLSAELQKAIDKMGFEQASPIQAEAIPVLLQGRDVVGQSQTGSGKTAAFAV 60
Query: 436 PAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTR 495
PAIE V S + +LILCPTRELA Q++ E L GI L + GG
Sbjct: 61 PAIEKVDPQNRS--------VQILILCPTRELAVQVSEEVHKLSIFKRGIHALPIYGGQS 112
Query: 496 FKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDV 555
++ L QI++ TPGR++DH+ + +RL +KM++LDEAD +LD+GFR+D+
Sbjct: 113 YERQFMGLRQG-AQIVIGTPGRVMDHMRRGT---LRLDQVKMVILDEADVMLDMGFREDI 168
Query: 556 ENIVDCLPRRRQSLLFSATMPK---ELVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHE 612
E I+ +P RQ++ FSATMP+ EL+ K V+I+Q + P
Sbjct: 169 EFILQAVPTERQTVFFSATMPRPIQELIQKYARD----------PQSVRIEQKAMTVPTV 218
Query: 613 LHF----------QILHHLLKEHILGTPDYKV-IVFCSTGMVTSLLYLLLREMKMNVREM 661
F ++L L+ H D K+ IVFC+T + L L + +
Sbjct: 219 EQFFYEVDRRFKVELLTRLIDIH-----DLKLGIVFCNTKRMVDDLVDHLNAQGYSADRL 273
Query: 662 YSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGR 721
+ Q RDR+ +FR S LV +DV+ARG+D DV V +P D E Y+HR+GR
Sbjct: 274 HGDMSQAMRDRVMNKFRKSGLEFLVATDVAARGIDVDDVQVVFNYDLPYDAEDYVHRIGR 333
Query: 722 TGREGKEGEGVLLLAPWEEYFLDDLKDLPLDKLQ 755
TGR G+ G + +A E + + ++ K+Q
Sbjct: 334 TGRAGRSGRAISFVAGRELFQIQHIERFTKMKIQ 367
>gi|425768575|gb|EKV07093.1| ATP-dependent RNA helicase DDX18 [Penicillium digitatum PHI26]
gi|425776136|gb|EKV14370.1| ATP-dependent RNA helicase DDX18 [Penicillium digitatum Pd1]
Length = 602
Score = 206 bits (525), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 155/464 (33%), Positives = 243/464 (52%), Gaps = 44/464 (9%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
++F E +S T++ + G+ MT +Q+ T+ L G+D + AKTG+GK++AFLLPAI
Sbjct: 119 QKFTELNLSEKTMQGINDMGFTTMTEIQQRTVPPLLAGRDVLGAAKTGSGKTLAFLLPAI 178
Query: 439 EAV--LKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHD---GIGVLTLVGG 493
E + L+ + T VL++ PTRELA QI A L+ +H GI ++GG
Sbjct: 179 EMLHALRFKPRNGTG------VLVVSPTRELALQIFGVARELMAHHSQTYGI----VIGG 228
Query: 494 TRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRK 553
+ + +L +L+ATPGRLLDH++N G + LK LV+DEAD +L++GF
Sbjct: 229 ANRRAEAEKLMKG-VNLLIATPGRLLDHLQNTQGFIFK--NLKTLVIDEADRILEVGFED 285
Query: 554 DVENIVDCLPRR-RQSLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSC 606
++ IV LP+ RQ++LFSAT + + L+ YI+ T ++Q
Sbjct: 286 EMRQIVKILPKEERQTMLFSATQTTKVEDLARISLRPGPLYINVDHSKEHSTVAGLEQGY 345
Query: 607 LVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKP 666
+V + F +L LK ++ K+IVF S+ LL + + V E++ ++
Sbjct: 346 VVCEADKRFLLLFSFLKRNL----KKKIIVFFSSCNCVKYHAELLNYIDLPVLELHGKQK 401
Query: 667 QLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREG 726
Q R EF +K+ L+ +DV+ARG+D P V ++Q P D YIHR+GRT R G
Sbjct: 402 QQKRTNTFFEFCNAKQGTLICTDVAARGLDIPAVDWIIQFDPPDDPRDYIHRVGRTAR-G 460
Query: 727 KEGEG--VLLLAPWEEYFLDDLKD--LPLDKLQLPH---LNPEIQLQMDNHMAKIDNNVK 779
EG+G ++ L P E FL LKD +P+ + + P +N + QL+ N
Sbjct: 461 AEGKGRSLMFLQPSEVGFLKHLKDARVPVVEFEFPASKIVNVQSQLEKLIGQNYYLNKSA 520
Query: 780 EAAYHAWLGYY--NSIREI-GRDKTTLVELANKFAQSIGLQRPP 820
+ Y ++L Y +S+R + +K LV++A F G PP
Sbjct: 521 KDGYRSYLQAYASHSLRTVFDVNKLDLVKVAKGF----GFNAPP 560
>gi|453081395|gb|EMF09444.1| DEAD-domain-containing protein [Mycosphaerella populorum SO2202]
Length = 837
Score = 206 bits (525), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 158/474 (33%), Positives = 243/474 (51%), Gaps = 45/474 (9%)
Query: 370 REEEPILSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGK 429
+E +P F + +S T L AA + +T +Q + L+G+D + AKTG+GK
Sbjct: 38 QELDPKAKYDTFTDLPLSEPTKIGLKAAHFSTLTDIQAKAIPLALQGRDILGAAKTGSGK 97
Query: 430 SIAFLLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVL- 488
++AFL+P +E + +A + LI+ PTRELA QI +L+ G G L
Sbjct: 98 TLAFLVPVLENLYRAQCVGGD---AGLGALIITPTRELAIQI----FEVLRKVGGKGHLF 150
Query: 489 ---TLVGGTRFKVDQRRLESDPC---QILVATPGRLLDHIENKSGLSVRLMGLKMLVLDE 542
++GG R E+D ILV TPGR+ H+E +G + L+MLV+DE
Sbjct: 151 SAGLVIGGKSV-----RDEADALLRMNILVCTPGRIKQHLEQTAGFNAD--NLRMLVMDE 203
Query: 543 ADHLLDLGFRKDVENIVDCLPRRRQSLLFSATMPKE------LVLKREHTYIDTVGLGSV 596
AD ++DLGF+ V+ I++ LP+ RQ++LFSAT K L LK E YI +
Sbjct: 204 ADRIMDLGFQHAVDAIIEYLPKDRQTMLFSATQSKRVSDLARLSLK-EPEYISVHETAAS 262
Query: 597 ETPVKIKQSCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK- 655
TP ++Q+ ++ P L ++ K+IVF S ++ R M+
Sbjct: 263 ATPKTLQQNYVITPLAEKLDTLWSFIQ----SAKKSKIIVFLSATKQVRFVFEAFRHMQP 318
Query: 656 -MNVREMYSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQ 714
+ + +Y R + R +E+F ++ L T+DV ARG+D+P V VVQV P D +
Sbjct: 319 GIPLLHLYGRMKETTRLETTEKFSRAQHSCLFTTDVVARGLDFPAVDWVVQVDCPEDADT 378
Query: 715 YIHRLGRTGREGKEGEGVLLLAPWEEY-FLDDL--KDLPLDKLQLPHLNPE-IQLQMDNH 770
YIHR+GRT R +EG VL L P EE L L K +P++++ + + I+ Q+ N
Sbjct: 379 YIHRVGRTARYEREGRAVLFLDPSEEEGMLTRLEQKKIPIERINVRQKKQQSIKDQLQN- 437
Query: 771 MAKIDNNVKEAAYHAWLGYYNSIREIGRDKTTL----VELANKFAQSIGLQRPP 820
M D +VK+ A A++ Y SI I +DK +L +++A S+GL P
Sbjct: 438 MCFQDPHVKQLAQKAFIAYTKSI-HIQKDKEVFNLQKYKL-DEWAASMGLPGAP 489
>gi|335049615|ref|ZP_08542602.1| putative DEAD-box ATP-dependent RNA helicase CshA [Megasphaera sp.
UPII 199-6]
gi|333762350|gb|EGL39848.1| putative DEAD-box ATP-dependent RNA helicase CshA [Megasphaera sp.
UPII 199-6]
Length = 420
Score = 206 bits (525), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 137/367 (37%), Positives = 197/367 (53%), Gaps = 27/367 (7%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F G+SP+ + L G T+VQE L A +G+D + +A+TGTGK++AFLLPA++
Sbjct: 5 FQTLGVSPILCELLKKRGIAVPTQVQEKALPALFQGRDILGQAQTGTGKTLAFLLPALQ- 63
Query: 441 VLKATSSSTTQLVPPIY---VLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFK 497
Q+ P + VLIL PTRELA QI A A L I VL ++GG +
Sbjct: 64 ----------QIHPDQHQEQVLILAPTRELAKQITAVATDLAAALH-IDVLNIIGGQTIE 112
Query: 498 VDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVEN 557
++L+ P Q+++ TPGRLLDH S + L G+ +++DEAD LL GF +DV+
Sbjct: 113 NQLQKLQRHP-QVIIGTPGRLLDHCRRHS---LNLTGVGRIIVDEADQLLQTGFLEDVDT 168
Query: 558 IVDCLPRRRQSLLFSATMP---KELVLKREHT-YIDTVGLGSVETPVKIKQSCLVAPHEL 613
++D P+RRQ L FSAT+P K L K H ++ V GS I+Q + E
Sbjct: 169 LLDMTPKRRQLLFFSATVPDKIKSLAKKHMHNPFVFHVLEGSSIALETIEQRIYMIKEEQ 228
Query: 614 HFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRI 673
F L LL E Y ++FC+T TS+L L V E++ Q R ++
Sbjct: 229 KFSFLCKLLHE----MNPYLSVIFCNTKERTSILAGQLIRAGFAVSELHGDLSQGRRTQV 284
Query: 674 SEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVL 733
+F +K +LV +D++ARG+D +T V +P D + YIHR+GRTGR G +G V
Sbjct: 285 LRDFSKAKTQLLVATDIAARGLDIAGITHVFNYDVPHDIDYYIHRIGRTGRAGNDGLAVT 344
Query: 734 LLAPWEE 740
L +E
Sbjct: 345 LATAADE 351
>gi|295675961|ref|YP_003604485.1| DEAD/DEAH box helicase [Burkholderia sp. CCGE1002]
gi|295435804|gb|ADG14974.1| DEAD/DEAH box helicase domain protein [Burkholderia sp. CCGE1002]
Length = 484
Score = 206 bits (525), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 134/383 (34%), Positives = 209/383 (54%), Gaps = 17/383 (4%)
Query: 377 SQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLP 436
S + FD+ G++P +KA+ +GY T +Q + L G+D + A+TGTGK+ +F LP
Sbjct: 9 STETFDQFGLAPDILKAIKESGYTSPTPIQAKAIPVVLAGRDVMGAAQTGTGKTASFSLP 68
Query: 437 AIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRF 496
I+ +L ++S + P+ LIL PTRELA Q+AA A K H + + GG
Sbjct: 69 IIQRLLPQANTSASPARHPVRALILTPTRELADQVAANVQAYAK-HTALRSAVVFGGVDM 127
Query: 497 KVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVE 556
+L +IL+ATPGRLLDH++ K+ L ++MLVLDEAD +LD+GF D++
Sbjct: 128 NPQSDQLRRG-VEILIATPGRLLDHVQQKTA---NLGQVQMLVLDEADRMLDMGFLPDLQ 183
Query: 557 NIVDCLPRRRQSLLFSATMPKELVLKREHTYI---DTVGLG-SVETPVKIKQSCLVAPHE 612
I++ LP+ RQ+LLFSAT E + K TY+ T+ + S T + Q
Sbjct: 184 RILNLLPKERQTLLFSATFSGE-IKKLAATYLRNPQTIEVARSNSTATNVTQVVYEVAEG 242
Query: 613 LHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDR 672
+ L++E L +VIVFC++ + S L L + ++ + Q R +
Sbjct: 243 DKTGAVVQLIRERGL----KQVIVFCNSKIGASRLARSLERDGVVATAIHGDRSQSERMQ 298
Query: 673 ISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGV 732
+ F+ + LV +DV+ARG+D ++ +V+ +P + E Y+HR+GRTGR G G+ +
Sbjct: 299 ALDAFKRGEVEALVATDVAARGLDIAELPAVINFDLPFNAEDYVHRIGRTGRAGASGDAL 358
Query: 733 LLLAPWEEYFLDDLKDL---PLD 752
L +P E L D++ L PLD
Sbjct: 359 SLCSPNERKQLADIEKLIKRPLD 381
>gi|326791684|ref|YP_004309505.1| DEAD/DEAH box helicase [Clostridium lentocellum DSM 5427]
gi|326542448|gb|ADZ84307.1| DEAD/DEAH box helicase domain protein [Clostridium lentocellum DSM
5427]
Length = 371
Score = 206 bits (525), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 137/374 (36%), Positives = 194/374 (51%), Gaps = 42/374 (11%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F GISP I L +G T +Q+ T+ L GKD + +A+TGTGK++AFLLP E
Sbjct: 3 FKTLGISPEMINHLKKSGITIPTPIQDQTIPLILSGKDVIGEAQTGTGKTLAFLLPLFE- 61
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
K +S S P I L+L PTRELA QI EA L IG+L + GG +
Sbjct: 62 --KLSSKS-----PNIQALVLSPTRELAIQITQEA-KKLAEAKAIGILPIYGGQDTAMQL 113
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
++L P +++ATPGRLLDHI KS + L VLDEAD +L +GF+ DVE+I
Sbjct: 114 KKL-GKPVHLVIATPGRLLDHIGRKS---IDLSKTTTFVLDEADQMLLMGFKNDVESITK 169
Query: 561 CLPRRRQSLLFSATM--------------PKELVLKREHTYIDTVGLGSVETPVKIKQSC 606
LP++RQ+L FSATM P + + ++ I+ + VET + KQ+
Sbjct: 170 QLPKKRQTLCFSATMDAPVKKLAYRYTSSPTTVTIAKKKITIEAIHQEIVETTDRHKQAA 229
Query: 607 LVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKP 666
L Q+L P Y I+FC T +LY +++ N ++S
Sbjct: 230 L-------LQVLSE-------DNP-YMAIIFCRTKRRVEVLYEAMKDKDYNCVRLHSDIL 274
Query: 667 QLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREG 726
Q R+RI + F+ L+ +DV+ARG+D VT + +P E YIHR+GRTGR G
Sbjct: 275 QSKRERIMKSFKKGDIQYLIATDVAARGLDISGVTHIYNYDVPETPEAYIHRIGRTGRAG 334
Query: 727 KEGEGVLLLAPWEE 740
+G + ++P E
Sbjct: 335 NDGYTCMFMSPKNE 348
>gi|402756148|ref|ZP_10858404.1| DNA/RNA helicase [Acinetobacter sp. NCTC 7422]
Length = 638
Score = 206 bits (525), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 131/395 (33%), Positives = 208/395 (52%), Gaps = 22/395 (5%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
K F E + +AL G+ T VQE + A LEGKD +V ++TG+GK+ AFLLP +
Sbjct: 3 KTFAEFSLHETLQQALEGLGFTTPTPVQEQAIPAALEGKDLLVSSQTGSGKTAAFLLPTL 62
Query: 439 EAVLKATS----SSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGT 494
A+ + + V +L++ PTRELA Q++ +AIA +++ G+ + ++GG
Sbjct: 63 NALAGQETFVPFKERMKAVTQPTILVISPTRELAQQVSQDAIAFVRHMKGVRIAAIMGGM 122
Query: 495 RFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKD 554
F ++L+ Q++VATPGRLLD + + ++L ++ L++DEAD +LDLGF +D
Sbjct: 123 PFGKQIQQLKG--AQVVVATPGRLLDLVNRRQ---LKLDKVESLIVDEADRMLDLGFAED 177
Query: 555 VENIVDCLPRRRQSLLFSATMPKELVLKREHTYIDTVGLGSVETPVKIKQSCLVAPH--- 611
+E I + R Q+L+FSAT ++ E D + ++ET H
Sbjct: 178 LEAIGELAANRNQTLMFSATFADRIIRLAERMMNDPQRI-AIETGHSTNTDVTQTLHWTD 236
Query: 612 --ELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLY 669
E ++L H L + + + +VF ST T +L L E +V ++ PQ
Sbjct: 237 GFEHKKKLLTHWLSDESVD----QAVVFASTQEDTDMLAEELAEAGHSVVALHGAMPQTV 292
Query: 670 RDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEG 729
R+R R + ILV +DV+ARG+D P ++ V+ G+P E Y+HR+GRTGR G+ G
Sbjct: 293 RNRRLRSIREGRAKILVATDVAARGLDVPTISHVINFGLPMKNEDYVHRIGRTGRAGRTG 352
Query: 730 EGVLLLAPWEE---YFLDDLKDLPLDKLQLPHLNP 761
+ V L E L+D D L+ ++ L P
Sbjct: 353 QAVTLATYRERGKIRALEDYLDARLNVSEIEGLEP 387
>gi|385203300|ref|ZP_10030170.1| DNA/RNA helicase, superfamily II [Burkholderia sp. Ch1-1]
gi|385183191|gb|EIF32465.1| DNA/RNA helicase, superfamily II [Burkholderia sp. Ch1-1]
Length = 491
Score = 206 bits (525), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 132/377 (35%), Positives = 207/377 (54%), Gaps = 14/377 (3%)
Query: 377 SQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLP 436
S FD+ G++P +KA+ +GY T +QE + L G+D + A+TGTGK+ +F LP
Sbjct: 9 STSTFDQFGLAPDILKAVKESGYTIPTPIQEQAIPVVLAGRDMMGAAQTGTGKTASFSLP 68
Query: 437 AIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRF 496
I+ +L S+S + P+ LIL PTRELA Q+AA A K H + + GG
Sbjct: 69 IIQRLLPQASTSASPARHPVRALILTPTRELADQVAANVQAYAK-HTALRSAVVFGGVDM 127
Query: 497 KVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVE 556
+L +IL+ATPGRLLDH++ K+ L +++LVLDEAD +LD+GF D++
Sbjct: 128 NPQSEQLRRG-VEILIATPGRLLDHVQQKTA---NLGQVQILVLDEADRMLDMGFLPDLQ 183
Query: 557 NIVDCLPRRRQSLLFSATMPKELVLKREHTYI---DTVGLG-SVETPVKIKQSCLVAPHE 612
I++ LP+ RQ+LLFSAT E + K TY+ T+ + S T ++Q
Sbjct: 184 RILNLLPKERQTLLFSATFSGE-IKKLAATYLRDPQTIEVARSNSTATNVRQIVYEVAEG 242
Query: 613 LHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDR 672
+ L++E L +VIVFC++ + S L L + ++ + Q R +
Sbjct: 243 DKTGAVVQLIRERGL----KQVIVFCNSKIGASRLARSLERDGVIATAIHGDRSQNERMQ 298
Query: 673 ISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGV 732
+ F+ + LV +DV+ARG+D ++ +V+ +P + E Y+HR+GRTGR G G+ +
Sbjct: 299 ALDAFKRGEIEALVATDVAARGLDIAELPAVINFDLPFNAEDYVHRIGRTGRAGASGDAL 358
Query: 733 LLLAPWEEYFLDDLKDL 749
L +P E L D++ L
Sbjct: 359 SLCSPNERKQLADIEKL 375
>gi|195481110|ref|XP_002101519.1| GE17675 [Drosophila yakuba]
gi|194189043|gb|EDX02627.1| GE17675 [Drosophila yakuba]
Length = 823
Score = 206 bits (525), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 155/504 (30%), Positives = 260/504 (51%), Gaps = 50/504 (9%)
Query: 352 RKEISKNKLNGN-GEKKE---KREEEPILSQKRFDECGISPLTIKALTAAGYIQMTRVQE 407
R+E++K++L E KE K E + K+F +S T+KALT + ++ T+VQ
Sbjct: 41 RQELNKSRLAATEAEIKELQAKYAEIDATTIKKFAHFPLSKKTLKALTESKFVHPTQVQR 100
Query: 408 ATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLVPPIYVLILCPTREL 467
++ L+GKD + A TG+GK++AFL+P +E + S + + +I+ PTREL
Sbjct: 101 DSIGPALQGKDVLGAAVTGSGKTLAFLIPVLEHLFMNKWSRSDG----VGAIIISPTREL 156
Query: 468 ASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSG 527
A QI + K+HD L ++GG K ++ R+ D C IL+ TPGRLL H++
Sbjct: 157 AYQIFETLKKVGKHHDFSAGL-IIGGKNLKFERTRM--DQCNILICTPGRLLQHMDENPL 213
Query: 528 LSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQSLLFSATMPKEL-----VLK 582
+ M ++LVLDEAD LD+GF+K + +I++ P RQ++LFSAT + +
Sbjct: 214 FNTSTM--EVLVLDEADRCLDMGFQKALNSIIENFPPVRQTMLFSATQTNTVQDLARLNL 271
Query: 583 REHTYIDTVGLGSVETPVK----------------IKQSCLVAPHELHFQILHHLLKEHI 626
++ Y+ G + E P ++QS +V E +L +K H+
Sbjct: 272 KDPVYVGYGGATAGEEPSSSTKKAPSTAVLAVPELLQQSYVVLNLEDKITMLWSFIKNHL 331
Query: 627 LGTPDYKVIVFCSTGMVTSLLYLLLREMKMN--VREMYSRKPQLYRDRISEEFRASKRLI 684
K+IVF S+ LY + +++ + +Y Q R I E+F ++
Sbjct: 332 ----KQKIIVFVSSCKQAKYLYEIFCKLRPGSPLLALYGTLHQDRRIAIYEDFLRKSHVV 387
Query: 685 LVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLAPW-EEYFL 743
+ ++DV++RG+D+P V VVQ+ P D QYIHR GR+ R GE +L+L P EEY +
Sbjct: 388 MFSTDVASRGLDFPAVNWVVQLDCPEDVSQYIHRAGRSARNKTRGECLLVLTPSEEEYMI 447
Query: 744 DDLKDLPLDKLQLPHLNPEI----QLQMDNHMAKIDNNVKEAAYHAWLGYYNSIREIGRD 799
LK+ ++ ++P+ +++++ +A+ ++ A A+L Y S+ + R+
Sbjct: 448 SALKEQLNIDIRCVQIDPKKLFSPRVKIEAFLAQFP-ELRATAQRAFLSYIKSVF-LMRN 505
Query: 800 KTTLVELA---NKFAQSIGLQRPP 820
K + + FAQS+GL P
Sbjct: 506 KRLFNVFSLDLDAFAQSLGLAVTP 529
>gi|116071349|ref|ZP_01468618.1| DEAD/DEAH box helicase-like protein [Synechococcus sp. BL107]
gi|116066754|gb|EAU72511.1| DEAD/DEAH box helicase-like protein [Synechococcus sp. BL107]
Length = 467
Score = 206 bits (525), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 140/411 (34%), Positives = 217/411 (52%), Gaps = 47/411 (11%)
Query: 370 REEEPILSQKR--------FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVV 421
++ PI+S R F++ + T++++ AGY+ T +Q T+ L+GKD +
Sbjct: 16 KDHSPIISNPRNDNNNTLTFEQLNLCAETVRSIREAGYLSPTPIQTLTIPEVLQGKDIMA 75
Query: 422 KAKTGTGKSIAFLLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKN 481
A+TGTGK+ AF+LP IE + Q ++ LIL PTRELA+Q+ A A K
Sbjct: 76 SAQTGTGKTAAFILPIIELLRVEDKPKRLQ----VHSLILTPTRELAAQVEANAKGYTK- 130
Query: 482 HDGIGVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLD 541
+ GI + GG + +RL+ ILVATPGRLLD I K+ +R LK+LVLD
Sbjct: 131 YLGIRSDAVFGGVSIRPQVKRLQGG-VDILVATPGRLLDLINQKT---IRFDNLKILVLD 186
Query: 542 EADHLLDLGFRKDVENIVDCLPRRRQSLLFSATMPKELVLKREHTYIDTVGLGSVETPVK 601
EAD +LD+GF +D++ +++ LP++RQ+++FSAT I + LG + PV+
Sbjct: 187 EADRMLDMGFIRDIKKVIEFLPKKRQNMMFSATFSAP---------IKKLALGLLNDPVE 237
Query: 602 IKQSC----------LVAPHEL--HFQILHHLLKEHILGTPDYK-VIVFCSTGMVTSLLY 648
IK S LV P ++ +L HL+K T ++K V+VF T +
Sbjct: 238 IKASVQNKAAPTIEHLVHPCDMARKVDLLCHLIK-----TNEWKQVLVFARTKHGADKVV 292
Query: 649 LLLREMKMNVREMYSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGI 708
+L + ++ K Q R R E F+ ILV +D++ARG+D + V+ + +
Sbjct: 293 KILCHQHIKASAIHGNKSQGARTRALEGFKNGDVKILVATDIAARGIDIHQLPYVINLDL 352
Query: 709 PPDREQYIHRLGRTGREGKEGEGVLLLAPWEEYFLDDLKDL---PLDKLQL 756
P E Y+HR+GRTGR G+ G + L+A E L ++ PL K+ +
Sbjct: 353 PNVAEDYVHRIGRTGRAGENGHAISLVAAEEALLLKAIEKFIGNPLPKVAV 403
>gi|320593758|gb|EFX06167.1| dead box RNA helicase [Grosmannia clavigera kw1407]
Length = 857
Score = 206 bits (525), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 154/462 (33%), Positives = 241/462 (52%), Gaps = 34/462 (7%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F + +S T L + + +T +Q + A L G D + AKTG+GK++AFL+P +E
Sbjct: 53 FSDVPLSEPTKMGLRDSHFETLTDIQSKAIPAALRGCDILGAAKTGSGKTLAFLVPVLEK 112
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+ +A + L LI+ PTREL+ QI E + + H ++GG K +
Sbjct: 113 LYRARWTEYDGL----GALIISPTRELSVQIF-EVLRKVGRHHRFSAGLVIGGKSLKEEA 167
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
R+ ILV TPGR+L H++ + L V L+MLVLDEAD ++D+GF+ V+ +V+
Sbjct: 168 ERVGR--MNILVCTPGRMLQHLDQTASLEVN--NLQMLVLDEADRIMDMGFQSAVDALVE 223
Query: 561 CLPRRRQSLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELH 614
LP+ RQ+LLFSAT K L LK + YI + TP +++Q +V P
Sbjct: 224 HLPQGRQTLLFSATQSKRVSDLARLSLK-DPEYIAVHEAAAAATPSQLQQHYVVTPLAEK 282
Query: 615 FQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVR--EMYSRKPQLYRDR 672
L+ ++ ++ K+IVF S+G Y +R ++ ++ ++ R+ Q+ R
Sbjct: 283 LDTLYGFIRANL----KCKMIVFFSSGKQVRFAYEAIRHLQPGIQLLHLHGRQKQVARLE 338
Query: 673 ISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGV 732
I F A+K L +DV ARG+D P V VVQ P D + YIHR GRT R G+ +
Sbjct: 339 IISRFSAAKHACLFATDVVARGVDIPMVDWVVQADCPEDADTYIHRSGRTARYESAGKAI 398
Query: 733 LLLAPWEEYFLD---DLKDLPLDKLQLPHLNPE-IQLQMDNHMAKIDNNVKEAAYHAWLG 788
L L P EE + K++P+ K+ + + I+ Q+ N M N++K A A++
Sbjct: 399 LFLDPSEEDGMVRRLQQKNVPIHKVNVREKKKKSIREQLQN-MCFQQNDIKYLAQKAFIS 457
Query: 789 YYNSIREIGRDKTTL----VELANKFAQSIGLQRPPPL-FRK 825
Y S+ + +DK ++L + FAQS+GL P + FRK
Sbjct: 458 YTRSV-HLQKDKEVFDLDKLDL-DGFAQSMGLAGAPQIRFRK 497
>gi|134296504|ref|YP_001120239.1| DEAD/DEAH box helicase domain-containing protein [Burkholderia
vietnamiensis G4]
gi|134139661|gb|ABO55404.1| DEAD/DEAH box helicase domain protein [Burkholderia vietnamiensis
G4]
Length = 512
Score = 206 bits (525), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 134/374 (35%), Positives = 206/374 (55%), Gaps = 16/374 (4%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
FD+ G++P +KA+ GY T +Q + L G+D + A+TGTGK+ +F LP I+
Sbjct: 35 FDQFGLAPDILKAIVEQGYTTPTPIQAQAIPVVLAGRDVMGAAQTGTGKTASFSLPIIQR 94
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+L S+S + P+ LIL PTRELA Q+AA A K H + + GG
Sbjct: 95 LLPHASTSASPARHPVRALILTPTRELADQVAANVHAYAK-HTALRSAVVFGGVDMNPQM 153
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
L +IL+ATPGRLLDH++ K+ L ++MLVLDEAD +LD+GF D++ I++
Sbjct: 154 AELRRG-VEILIATPGRLLDHVQQKTA---NLGQVQMLVLDEADRMLDMGFLPDLQRILN 209
Query: 561 CLPRRRQSLLFSATMPKELVLKREHTYI---DTVGLG-SVETPVKIKQSCL-VAPHELHF 615
LP+ RQ+LLFSAT E + K TY+ T+ + S T + Q VA +
Sbjct: 210 LLPKERQTLLFSATFSPE-IKKLASTYLRNPQTIEVARSNSTNANVTQIVYDVAEGDKQA 268
Query: 616 QILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISE 675
++ LL+ L +VIVFC++ + S L L + ++ K Q+ R + +
Sbjct: 269 AVV-QLLRGRGL----KQVIVFCNSKIGASRLARNLERDGVVASAIHGDKSQIERMQALD 323
Query: 676 EFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLL 735
F+ + LV +DV+ARG+D ++ +V+ +P + E Y+HR+GRTGR G G+ + L
Sbjct: 324 AFKRGEIEALVATDVAARGLDIAELPAVINFDLPFNAEDYVHRIGRTGRAGATGDALSLC 383
Query: 736 APWEEYFLDDLKDL 749
+P E L D++ L
Sbjct: 384 SPNERKQLADIEKL 397
>gi|226953843|ref|ZP_03824307.1| ATP-dependent RNA helicase [Acinetobacter sp. ATCC 27244]
gi|226835434|gb|EEH67817.1| ATP-dependent RNA helicase [Acinetobacter sp. ATCC 27244]
Length = 647
Score = 206 bits (525), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 131/395 (33%), Positives = 208/395 (52%), Gaps = 22/395 (5%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
K F E + +AL G+ T VQE + A LEGKD +V ++TG+GK+ AFLLP +
Sbjct: 3 KTFAEFSLHETLQQALEGLGFTTPTPVQEQAIPAALEGKDLLVSSQTGSGKTAAFLLPTL 62
Query: 439 EAVLKATS----SSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGT 494
A+ + + V +L++ PTRELA Q++ +AIA +++ G+ + ++GG
Sbjct: 63 NALAGQETFVPFKERMKAVTQPTILVISPTRELAQQVSQDAIAFVRHMKGVRIAAIMGGM 122
Query: 495 RFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKD 554
F ++L+ Q++VATPGRLLD + + ++L ++ L++DEAD +LDLGF +D
Sbjct: 123 PFGKQIQQLKG--AQVVVATPGRLLDLVNRRQ---LKLDKVESLIVDEADRMLDLGFAED 177
Query: 555 VENIVDCLPRRRQSLLFSATMPKELVLKREHTYIDTVGLGSVETPVKIKQSCLVAPH--- 611
+E I + R Q+L+FSAT ++ E D + ++ET H
Sbjct: 178 LEAIGELAANRNQTLMFSATFADRIIRLAERMMNDPQRI-AIETGHSTNTDVTQTLHWTD 236
Query: 612 --ELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLY 669
E ++L H L + + + +VF ST T +L L E +V ++ PQ
Sbjct: 237 GFEHKKKLLTHWLSDESVD----QAVVFASTQEDTDMLAEELAEAGHSVVALHGAMPQTV 292
Query: 670 RDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEG 729
R+R R + ILV +DV+ARG+D P ++ V+ G+P E Y+HR+GRTGR G+ G
Sbjct: 293 RNRRLRSIREGRAKILVATDVAARGLDVPTISHVINFGLPMKNEDYVHRIGRTGRAGRTG 352
Query: 730 EGVLLLAPWEE---YFLDDLKDLPLDKLQLPHLNP 761
+ V L E L+D D L+ ++ L P
Sbjct: 353 QAVTLATYRERGKIRALEDYLDARLNVSEIEGLEP 387
>gi|294651664|ref|ZP_06728967.1| ATP-dependent RNA helicase [Acinetobacter haemolyticus ATCC 19194]
gi|292822443|gb|EFF81343.1| ATP-dependent RNA helicase [Acinetobacter haemolyticus ATCC 19194]
Length = 647
Score = 206 bits (525), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 133/399 (33%), Positives = 209/399 (52%), Gaps = 30/399 (7%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
K F E + +AL G+ T VQE + A LEGKD +V ++TG+GK+ AFLLP +
Sbjct: 3 KTFAEFSLHETLQQALEGLGFTTPTPVQEQAIPAALEGKDLLVSSQTGSGKTAAFLLPTL 62
Query: 439 EAV--------LKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTL 490
A+ K + TQ +L++ PTRELA Q++ +AIA +++ G+ + +
Sbjct: 63 NALAGQETFVPFKERMKAVTQPT----ILVISPTRELAQQVSQDAIAFVRHMKGVRIAAI 118
Query: 491 VGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLG 550
+GG F ++L+ Q++VATPGRLLD + + ++L ++ L++DEAD +LDLG
Sbjct: 119 MGGMPFGKQIQQLKG--AQVVVATPGRLLDLVNRRQ---LKLDKVESLIVDEADRMLDLG 173
Query: 551 FRKDVENIVDCLPRRRQSLLFSATMPKELVLKREHTYIDTVGLGSVETPVKIKQSCLVAP 610
F +D+E I + R Q+L+FSAT ++ E D + ++ET
Sbjct: 174 FAEDLEAIGELAANRNQTLMFSATFADRIIRLAERMMNDPQRI-AIETGHSTNTDVTQTL 232
Query: 611 H-----ELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRK 665
H E ++L H L + + + +VF ST T +L L E +V ++
Sbjct: 233 HWTDGFEHKKKLLTHWLSDESVD----QAVVFASTQEDTDMLAEELAEAGHSVVALHGAM 288
Query: 666 PQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGRE 725
PQ R+R R + ILV +DV+ARG+D P ++ V+ G+P E Y+HR+GRTGR
Sbjct: 289 PQTVRNRRLRSIREGRAKILVATDVAARGLDVPTISHVINFGLPMKNEDYVHRIGRTGRA 348
Query: 726 GKEGEGVLLLAPWEE---YFLDDLKDLPLDKLQLPHLNP 761
G+ G+ V L E L+D D L+ ++ L P
Sbjct: 349 GRTGQAVTLATYRERGKIRALEDYLDARLNVSEIEGLEP 387
>gi|318040201|ref|ZP_07972157.1| superfamily II DNA/RNA helicase [Synechococcus sp. CB0101]
Length = 537
Score = 206 bits (525), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 137/384 (35%), Positives = 207/384 (53%), Gaps = 24/384 (6%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F G +P + ALTA GY + + +Q+A + L G+D V +A+TGTGK+ AF LP + A
Sbjct: 80 FASFGFAPELLDALTAIGYEEPSPIQKAAIPELLLGRDLVGQAQTGTGKTAAFALPMLAA 139
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+ Q P VL+L PTRELA Q+A + N + VL L GG+ F+
Sbjct: 140 L------DGQQRTP--QVLVLTPTRELAIQVADAFKSYAANMPHLRVLPLYGGSDFRDQI 191
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
RL+ QI+V TPGR++DH+ + + L GL+ LVLDEAD +L +GF DVE +++
Sbjct: 192 VRLKRG-VQIVVGTPGRVMDHMRQGT---LDLSGLRSLVLDEADEMLRMGFIDDVEWVLE 247
Query: 561 CLPRRRQSLLFSATMPKELVLKREHTYIDTVGLGSVET----PVKIKQSCLVAPHELHFQ 616
LP +RQ +LFSATMP E + + H Y++ +++T +I+Q + +
Sbjct: 248 QLPSQRQVVLFSATMPPE-IRRISHKYLNDPAEVTIKTKGADSSRIRQRFITVNGPQKLE 306
Query: 617 ILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEE 676
L +L+ VI+F T +T + L +V + Q R+R E
Sbjct: 307 ALTRVLESET----KEGVIIFARTKAITVTVAEALEAKGYDVAVLNGDVAQSQRERTIER 362
Query: 677 FRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLA 736
+ +LV +DV+ARG+D +T VV IP D E Y+HR+GRTGR G+ G+ +L +
Sbjct: 363 LKNGTVDVLVATDVAARGLDVDRITLVVNYDIPFDSEAYVHRVGRTGRAGRSGDAILFVT 422
Query: 737 PWEEYFLDDLKDL---PLDKLQLP 757
P E FL L+ P++ +Q+P
Sbjct: 423 PRERRFLGGLERAVGRPIEPMQIP 446
>gi|344290046|ref|XP_003416750.1| PREDICTED: ATP-dependent RNA helicase DDX18 [Loxodonta africana]
Length = 670
Score = 206 bits (525), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 152/449 (33%), Positives = 245/449 (54%), Gaps = 37/449 (8%)
Query: 390 TIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSST 449
T+KA+ G+ MT +Q ++ LEG+D + AKTG+GK++AFL+PA+E ++K
Sbjct: 190 TLKAIKEMGFTNMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPAVELIVK------ 243
Query: 450 TQLVP--PIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDP 507
+ +P VLIL PTRELA Q L+ H L ++GG+ + ++L ++
Sbjct: 244 LKFMPRNGTGVLILSPTRELAMQTFGVLKELMTYHVHTYGL-IMGGSNRSAEAQKL-ANG 301
Query: 508 CQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQ 567
I+VATPGRLLDH++N G + L+ LV+DEAD +LD+GF ++++ I+ LP RRQ
Sbjct: 302 INIIVATPGRLLDHMQNTPGFMYK--NLQCLVIDEADRILDVGFEEELKQIIKLLPVRRQ 359
Query: 568 SLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILHHL 621
++LFSAT ++ + LK+E Y+ + T ++Q +V E F +L
Sbjct: 360 TMLFSATQTRKVEDLARISLKKEPLYVGVDDDKAHATVDGLEQGYVVCASEKRFLLLFTF 419
Query: 622 LKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEFRASK 681
LK++ K++VF S+ Y LL + + V ++ R+ Q R +F +
Sbjct: 420 LKKN----RKKKLMVFFSSCKSVKYHYELLNYIDLPVLAIHGRQKQNKRTTTFFQFCNAD 475
Query: 682 RLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEG--VLLLAPWE 739
IL+ +DV+ARG+D P+V +VQ P D ++YIHR+GRT R G G G +L+L P E
Sbjct: 476 SGILLCTDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTAR-GLNGRGHALLILRPEE 534
Query: 740 EYFLDDLKD--LPLDKLQLPHLN-PEIQLQMDNHMAK--IDNNVKEAAYHAWLGYYN--S 792
FL LK +PL + + +IQ Q++ + K + + AY +++ Y+ S
Sbjct: 535 LGFLRYLKQSKVPLSEFEFSWSKISDIQSQLEQLIEKNYFLHKSAQEAYKSYIRAYDSHS 594
Query: 793 IREI-GRDKTTLVELANKFAQSIGLQRPP 820
+++I + L E+A F G + PP
Sbjct: 595 LKQIFNVNNLNLPEVALSF----GFKVPP 619
>gi|410659385|ref|YP_006911756.1| Cold-shock DEAD-box protein A [Dehalobacter sp. DCA]
gi|410662371|ref|YP_006914742.1| Cold-shock DEAD-box protein A [Dehalobacter sp. CF]
gi|409021740|gb|AFV03771.1| Cold-shock DEAD-box protein A [Dehalobacter sp. DCA]
gi|409024727|gb|AFV06757.1| Cold-shock DEAD-box protein A [Dehalobacter sp. CF]
Length = 471
Score = 206 bits (525), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 132/362 (36%), Positives = 199/362 (54%), Gaps = 20/362 (5%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F E G+S + +A++ G+ + T +QE T+ LEGKD + +A+TGTGK+ AF +P IE
Sbjct: 4 FFEIGLSSVLTQAISEMGFEETTPIQERTIPLVLEGKDIIGQAQTGTGKTAAFGIPMIER 63
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+ S I L++ PTRELA Q+A E + + G+ L + GG
Sbjct: 64 MKPDRES--------IKALVVTPTRELAIQVAEE-LNRIGQFKGVRSLPIYGGQDIDRQI 114
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
R L + P QI+V TPGRL+DH+ ++ +RL ++ +VLDEAD +L +GF +D+ENI+
Sbjct: 115 RSLRNRP-QIIVGTPGRLMDHMRRRT---IRLQQVETVVLDEADEMLSMGFVEDIENILK 170
Query: 561 CLPRRRQSLLFSATMPKELV--LKREHTYIDTVGLGSVETPVKIKQSCLVAPHELH-FQI 617
+P +RQ+LLFSATMPK ++ +R + + + + E V + C V E F +
Sbjct: 171 EVPEQRQTLLFSATMPKSILDLAQRFMQNPEYISMKTKEIIVPQIEQCYVEVQEKQKFDV 230
Query: 618 LHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEF 677
L LL + +PD IVF T L+ L + + ++ Q RD + F
Sbjct: 231 LCRLLD---IQSPDL-AIVFGRTKRRVDELFEALSKRGYSAEGIHGDLTQARRDMVMRHF 286
Query: 678 RASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLAP 737
+ ILV +DV+ARG+D VT V +P D E Y+HR+GRTGR GK G+ + + P
Sbjct: 287 KEGLTEILVATDVAARGLDISGVTHVYNFDVPQDPESYVHRIGRTGRAGKGGQAITFVTP 346
Query: 738 WE 739
E
Sbjct: 347 RE 348
>gi|189533973|ref|XP_001922220.1| PREDICTED: probable ATP-dependent RNA helicase DDX10 [Danio rerio]
Length = 864
Score = 206 bits (525), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 144/458 (31%), Positives = 242/458 (52%), Gaps = 35/458 (7%)
Query: 380 RFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIE 439
+F + +S T+K L A Y Q T +Q T+ L+G+D + AKTG+GK++AFL+P +E
Sbjct: 71 KFSDFPLSKKTLKGLLEAQYRQPTEIQRQTIGFALQGRDVLGAAKTGSGKTLAFLIPVLE 130
Query: 440 AVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVD 499
+ + ++ L LI+ PTRELA Q + KNH+ L ++GG K +
Sbjct: 131 CLYREQWTAMDGL----GALIISPTRELAYQTFEVLRKVGKNHEFSAGL-VIGGKDLKDE 185
Query: 500 QRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIV 559
++ I++ TPGRLL H++ + L MLVLDEAD +LD+GF + IV
Sbjct: 186 SEKIHR--TNIIICTPGRLLQHMDETATFHAS--DLHMLVLDEADRILDMGFADTLNAIV 241
Query: 560 DCLPRRRQSLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHEL 613
+ LP+ RQ+LLFSAT + L LK + Y+ TP ++Q+ +V
Sbjct: 242 ENLPKSRQTLLFSATQTRSVKDLARLSLK-DPEYVWVHEQAKFSTPATLEQNYVVCELHQ 300
Query: 614 HFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK--MNVREMYSRKPQLYRD 671
+L+ L+ H+ K+IVF + L+ + ++ ++V ++ ++ Q+ R
Sbjct: 301 KVNMLYSFLRSHL----QKKIIVFFACCKEVQYLFRIFCRLRPGISVLALHGKQQQMKRV 356
Query: 672 RISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEG 731
+ +F +L +D++ARG+D+P V V+Q P D YIHR+GRT R + GE
Sbjct: 357 EVYNDFVRKTSAVLFATDIAARGLDFPAVNWVLQFDCPEDANTYIHRVGRTARYKEGGEA 416
Query: 732 VLLLAPWEEY-FLDDL--KDLPLDKLQLPHLNPE----IQLQMDNHMAKIDNNVKEAAYH 784
+L+L P EE + L K +P++K+Q +NPE +Q +++ +A+ + KE A
Sbjct: 417 LLVLLPSEEKGMISQLQEKKVPINKIQ---VNPEKLMSVQQKLEAFLAQ-EKEQKERAQR 472
Query: 785 AWLGYYNSIREI-GRDKTTLVELA-NKFAQSIGLQRPP 820
++ Y S+ + +D +++L ++A S+GL P
Sbjct: 473 CFVSYLRSVYLMKNKDVFDVLQLKLPEYAMSLGLAVAP 510
>gi|389703934|ref|ZP_10185728.1| ATP-dependent RNA helicase [Acinetobacter sp. HA]
gi|388611316|gb|EIM40420.1| ATP-dependent RNA helicase [Acinetobacter sp. HA]
Length = 623
Score = 206 bits (525), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 128/382 (33%), Positives = 205/382 (53%), Gaps = 22/382 (5%)
Query: 392 KALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATS----S 447
+AL A G+ T VQE ++ A LEGKD +V ++TG+GK+ AFLLP + + +
Sbjct: 16 QALQALGFTAPTPVQEQSIPAALEGKDLLVSSQTGSGKTAAFLLPTLNGLATEDTFVPFK 75
Query: 448 STTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDP 507
+ V +L++ PTRELA Q+ +AIA +++ G+ + ++GG F ++L+
Sbjct: 76 ERMKAVTQPNILVISPTRELAQQVCQDAIAFVRHMKGVRIAAIMGGMPFGKQIQQLKG-- 133
Query: 508 CQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQ 567
Q++VATPGRLLD + + ++L + L++DEAD +LDLGF +D+E I D R+Q
Sbjct: 134 AQVVVATPGRLLDLVNRRQ---IKLDKVDALIVDEADRMLDLGFSEDLEAIGDLAANRKQ 190
Query: 568 SLLFSATMPKELVLKREHTYIDTVGLGSVETPVKIKQSCLVAPH-----ELHFQILHHLL 622
+L+FSAT ++ E + + ++ET H E ++L H L
Sbjct: 191 TLMFSATFAPRIITLAERMMNEPERI-AIETGHSTNTDITQTLHWTDGFEHKKKLLTHWL 249
Query: 623 KEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEFRASKR 682
E + + +VF ST T +L L E ++V ++ PQ R+R R +
Sbjct: 250 NEEDVD----QAVVFASTQEDTDMLAEELAEAGLSVVALHGAMPQTVRNRRLRSIREGRA 305
Query: 683 LILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLAPWEE-- 740
ILV +DV+ARG+D P ++ V+ G+P E Y+HR+GRTGR G+ G+ + L E
Sbjct: 306 KILVATDVAARGLDVPTISHVINFGLPMKNEDYVHRIGRTGRAGRTGKAITLATYRERGK 365
Query: 741 -YFLDDLKDLPLDKLQLPHLNP 761
L+D D L+ ++ L P
Sbjct: 366 IRALEDYLDARLEVSEIEGLEP 387
>gi|50086240|ref|YP_047750.1| ATP-dependent RNA helicase [Acinetobacter sp. ADP1]
gi|49532216|emb|CAG69928.1| putative ATP-dependent RNA helicase [Acinetobacter sp. ADP1]
Length = 640
Score = 206 bits (524), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 126/379 (33%), Positives = 204/379 (53%), Gaps = 19/379 (5%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
K F + + +AL G+ T VQE + A LEGKD +V ++TG+GK+ AFLLP +
Sbjct: 7 KNFADFSLHESLQQALQDLGFTSPTPVQEQAIPAALEGKDLLVSSQTGSGKTAAFLLPTL 66
Query: 439 EAVLKATS----SSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGT 494
++ + + V +L++ PTRELA Q++ +AIAL+++ G+ + ++GG
Sbjct: 67 HSLAGQDTFLPFKERMRAVTQPNILVISPTRELAQQVSQDAIALVRHMKGVRIAAIMGGM 126
Query: 495 RFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKD 554
F ++L+ Q++VATPGRLLD + + ++L + L++DEAD +LDLGF +D
Sbjct: 127 PFAKQIQQLKG--AQVVVATPGRLLDLVNRRQ---IKLDKVDALIVDEADRMLDLGFSED 181
Query: 555 VENIVDCLPRRRQSLLFSATMPKELVLKREHTYIDTVGLGSVETPVKIKQSCLVAPH--- 611
+E I + R+Q+L+FSAT ++ E D + + ++ET H
Sbjct: 182 LEAISELAANRKQTLMFSATFADRIIRLAECMMQDPMRI-AIETGHSTNTDITQTLHWTD 240
Query: 612 --ELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLY 669
E ++L H L + + + +VF ST T +L L E +V ++ PQ
Sbjct: 241 GFEHKKKLLTHWLSDESMD----QAVVFASTQEDTDMLAEELAEAGHSVVALHGAMPQTV 296
Query: 670 RDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEG 729
R+R R K ILV +DV+ARG+D P ++ V+ G+P E Y+HR+GRTGR G+ G
Sbjct: 297 RNRRLRSIREGKAKILVATDVAARGLDVPTISHVINFGLPMKHEDYVHRIGRTGRAGRTG 356
Query: 730 EGVLLLAPWEEYFLDDLKD 748
+ + L E + L+D
Sbjct: 357 QAITLATYRERGKIRALED 375
>gi|387902864|ref|YP_006333203.1| ATP-dependent RNA helicase [Burkholderia sp. KJ006]
gi|387577756|gb|AFJ86472.1| ATP-dependent RNA helicase [Burkholderia sp. KJ006]
Length = 493
Score = 206 bits (524), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 134/374 (35%), Positives = 206/374 (55%), Gaps = 16/374 (4%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
FD+ G++P +KA+ GY T +Q + L G+D + A+TGTGK+ +F LP I+
Sbjct: 13 FDQFGLAPDILKAIVEQGYTTPTPIQAQAIPVVLAGRDVMGAAQTGTGKTASFSLPIIQR 72
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+L S+S + P+ LIL PTRELA Q+AA A K H + + GG
Sbjct: 73 LLPHASTSASPARHPVRALILTPTRELADQVAANVHAYAK-HTALRSAVVFGGVDMNPQM 131
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
L +IL+ATPGRLLDH++ K+ L ++MLVLDEAD +LD+GF D++ I++
Sbjct: 132 AELRRG-VEILIATPGRLLDHVQQKTA---NLGQVQMLVLDEADRMLDMGFLPDLQRILN 187
Query: 561 CLPRRRQSLLFSATMPKELVLKREHTYI---DTVGLG-SVETPVKIKQSCL-VAPHELHF 615
LP+ RQ+LLFSAT E + K TY+ T+ + S T + Q VA +
Sbjct: 188 LLPKERQTLLFSATFSPE-IKKLASTYLRNPQTIEVARSNSTNANVTQIVYDVAEGDKQA 246
Query: 616 QILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISE 675
++ LL+ L +VIVFC++ + S L L + ++ K Q+ R + +
Sbjct: 247 AVV-QLLRGRGL----KQVIVFCNSKIGASRLARNLERDGVVASAIHGDKSQIERMQALD 301
Query: 676 EFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLL 735
F+ + LV +DV+ARG+D ++ +V+ +P + E Y+HR+GRTGR G G+ + L
Sbjct: 302 AFKRGEIEALVATDVAARGLDIAELPAVINFDLPFNAEDYVHRIGRTGRAGATGDALSLC 361
Query: 736 APWEEYFLDDLKDL 749
+P E L D++ L
Sbjct: 362 SPNERKQLADIEKL 375
>gi|281204091|gb|EFA78287.1| putative RNA helicase [Polysphondylium pallidum PN500]
Length = 837
Score = 206 bits (524), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 153/519 (29%), Positives = 257/519 (49%), Gaps = 49/519 (9%)
Query: 331 KRVPLKSLEDEHDFEEQVELIRKEI--------------SKNKLNGNGEKKEKREEEPIL 376
++ P ++L+ E +E I+K I +K +L N E K+ +
Sbjct: 42 RQAPFRALQAE------IEQIKKRIEDEQPQRGSNPLANTKEELVENNETKDYKVS--YT 93
Query: 377 SQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLP 436
+ ++F + IS +I+AL + +MT +Q A + L G+D + AKTG+GK++AF++P
Sbjct: 94 TARQFKDLPISAKSIQALEWGKFNKMTDIQRAAIPHALCGRDVLGAAKTGSGKTLAFIVP 153
Query: 437 AIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRF 496
+E + + + + +IL PTRELA QI E + + ++GG
Sbjct: 154 MLELLWRNNWTEND----GVGAIILAPTRELAIQIF-EVLRIAGKTHSFSAGLIIGGKDV 208
Query: 497 KVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVE 556
+++++ + IL+ATPGRLL H++ G L+ML+LDEAD +LD+GF K +
Sbjct: 209 AGEKKKIGT--MNILIATPGRLLQHMDETDGFQCS--NLQMLILDEADRILDMGFSKSLN 264
Query: 557 NIVDCLPRRRQSLLFSATMPKEL-----VLKREHTYIDTVGLGSVETPVKIKQSCLVAPH 611
I+ LP+ RQ+LLFSAT K + + ++ YI V TP ++Q+ V
Sbjct: 265 AIISNLPKARQTLLFSATQTKSIKDLARLSLKDPEYISVYDKDQVSTPKNLQQTICVTAL 324
Query: 612 ELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVR--EMYSRKPQLY 669
+ +L+ +K H+ K IVF ST +Y + + R +++ + Q
Sbjct: 325 DKKIDLLYSFIKTHLTS----KTIVFLSTCKQVRFMYEMFKLCNPGCRLFQLHGKMKQWT 380
Query: 670 RDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEG 729
R + + F L +DV+ARG+D+P+V VVQ+ P D + YIHR+GRT R + G
Sbjct: 381 RLEVFQNFSHFSEGTLFATDVAARGLDFPEVDWVVQMDCPEDIQTYIHRVGRTARYHQGG 440
Query: 730 EGVLLLAPWEEYFLDDLKDLPLDKLQLPHLNPE----IQLQMDNHMAKIDNNVKEAAYHA 785
+ +L P E+ L D K + NP IQ Q+ +++ + K A A
Sbjct: 441 KSFTVLLPSEKEEFTKLMDKQKIKYDIMDANPNQLVTIQAQLAGFLSEKPEH-KYLAQKA 499
Query: 786 WLGYYNSI-REIGRDKTTLVEL-ANKFAQSIGLQRPPPL 822
++ Y S+ R+ ++ L EL F++S+GL P +
Sbjct: 500 FVSYLKSLHRQENKNMFKLEELNLADFSKSMGLPGAPKI 538
>gi|323450950|gb|EGB06829.1| hypothetical protein AURANDRAFT_10453, partial [Aureococcus
anophagefferens]
Length = 511
Score = 206 bits (524), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 137/383 (35%), Positives = 208/383 (54%), Gaps = 22/383 (5%)
Query: 375 ILSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFL 434
+ S+ RFD ++ T AL A G +++++Q+ + LEG+D + AKTG+GK++AFL
Sbjct: 13 MFSETRFDSLPLTDGTQAALKAMGLERLSKIQDKAIPPLLEGRDLLGNAKTGSGKTLAFL 72
Query: 435 LPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAA---EAIALLKNHDGIGVLTLV 491
+P +E + KA + L L++ PTREL+ QI E +++ K+ G++ +
Sbjct: 73 IPLVELLTKARFQQRSGLGG----LVISPTRELSLQIYGVLRELLSVAKHGHTHGLV--I 126
Query: 492 GGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGF 551
GG + + RL C ILVATPGRLLDH++N SG + L M V DEAD +L+ GF
Sbjct: 127 GGANRRGEAERLGKGVC-ILVATPGRLLDHLQNTSGFVFK--NLLMFVCDEADRILEQGF 183
Query: 552 RKDVENIVDCLPRRRQSLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQS 605
D+ IV CLP RQ+ LFSAT ++ L +K E Y+ + T ++Q
Sbjct: 184 EDDLRGIVRCLPGTRQTALFSATQTRKVEDLARLAIKSEPVYVGVHDAETTSTVAGLEQG 243
Query: 606 CLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRK 665
+V F++L LK H +KV+VF S+ LL + + V +++ R+
Sbjct: 244 YVVVEPGDRFRLLFSFLKRH---AKKHKVMVFFSSCNAVKFYADLLNYVDVPVLDIHGRQ 300
Query: 666 PQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGRE 725
Q R EF + +L+ +DV+ARG+D P V +VQ P D +YIHR+GRT R
Sbjct: 301 KQAKRTATFFEFCRATSGVLLCTDVAARGLDIPKVHWIVQYDPPDDPREYIHRVGRTARG 360
Query: 726 GK-EGEGVLLLAPWEEYFLDDLK 747
G +G+ +L L P E FL L+
Sbjct: 361 GDGDGKALLFLIPSELGFLKFLR 383
>gi|184200206|ref|YP_001854413.1| ATP-dependent DEAD-box RNA helicase DeaD [Kocuria rhizophila
DC2201]
gi|183580436|dbj|BAG28907.1| ATP-dependent DEAD-box RNA helicase DeaD [Kocuria rhizophila
DC2201]
Length = 719
Score = 206 bits (524), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 140/407 (34%), Positives = 213/407 (52%), Gaps = 20/407 (4%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F E G+ + AL GY + +Q AT+ A L G+D V A+TGTGK+ AF +PA+
Sbjct: 78 FAELGVDGRVLAALDEVGYEYPSPIQAATIPALLSGRDVVGLAQTGTGKTAAFAVPALSK 137
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNH-DGIGVLTLVGGTRFKVD 499
+ + + Q VL+L PTRELA Q+A EA H + VL + GG+ +
Sbjct: 138 LAELSDLHGPQR--STRVLVLAPTRELALQVA-EAFGSYATHLEDFTVLPVYGGSSYGPQ 194
Query: 500 QRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIV 559
L+ Q++V TPGR++DH+ S S++L + +VLDEAD +L +GF +DVE I+
Sbjct: 195 LAGLKRG-AQVVVGTPGRVIDHL---SKGSLKLDDIAYVVLDEADEMLRMGFSEDVEKIL 250
Query: 560 DCLPRRRQSLLFSATMPKELVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQIL- 618
P +Q LFSATMPK + + D E VK K + + + Q++
Sbjct: 251 AQTPVEKQVALFSATMPKAIRRIAQQYLRD-----PQEITVKAKTTTGTNTRQRYMQVMG 305
Query: 619 -HHL-LKEHILGTPDYK-VIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISE 675
H L +L DY VIVF T T + L+ + PQ R+R +
Sbjct: 306 PHKLDAMTRVLEVEDYDGVIVFVRTKAATEEIADKLKARGYTAAAINGDIPQNLRERTVD 365
Query: 676 EFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLL 735
R K ILV +DV+ARG+D ++ VV IP D E Y+HR+GRTGR G++GE +L +
Sbjct: 366 SLREGKIDILVATDVAARGLDVERISLVVNYDIPHDTESYVHRIGRTGRAGRKGEAILFM 425
Query: 736 APWEEYFLDDLKDL---PLDKLQLPHLNPEIQLQMDNHMAKIDNNVK 779
P E+Y L ++ P++++++P + Q + DN +I+ ++
Sbjct: 426 TPREKYLLRAIEKATRQPVEQMRVPTTDEVNQTRKDNFAQQIEETIE 472
>gi|357008100|ref|ZP_09073099.1| DEAD/DEAH box helicase domain-containing protein [Paenibacillus
elgii B69]
Length = 529
Score = 206 bits (524), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 137/397 (34%), Positives = 209/397 (52%), Gaps = 33/397 (8%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
K F E G+ P ++A+T G+ + T +QE + +EG+D + +A+TGTGK+ AF +P I
Sbjct: 2 KTFSEFGLEPKVLRAITEMGFEESTPIQEKAIPIAMEGRDLIGQAQTGTGKTAAFGIPLI 61
Query: 439 EAV-LKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFK 497
+ +K I LI+CPTRELA Q+A E I L GI L + GG
Sbjct: 62 NKIDIKEER---------IVALIMCPTRELAIQVAEE-IEKLGRFKGIRSLPIYGGQDIV 111
Query: 498 VDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVEN 557
R L P QI++ TPGRLLDHI K+ ++L ++ ++LDEAD +LD+GF +D+++
Sbjct: 112 KQIRALRKKP-QIIIGTPGRLLDHINRKT---IKLDDVQTVILDEADEMLDMGFMEDIQS 167
Query: 558 IVDCLPRRRQSLLFSATMP-------KELVLKREHTYIDTVGLGSVETPVKIKQSCLVAP 610
I+ +P RQ++LFSATMP ++ + EH +V V P+ I QS +
Sbjct: 168 ILKLVPDERQTMLFSATMPINIQKLAQQFLSNPEHV---SVIPKQVSAPL-IDQSYIELH 223
Query: 611 HELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYR 670
F+ L L+ + PD I+F T L L++ ++ Q R
Sbjct: 224 ERQKFEALCRLID---MEAPDL-AIIFGRTKRRVDELSEALQKRGYTAEGLHGDLSQNQR 279
Query: 671 DRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGE 730
D + +FR +LV +DV+ARG+D VT V+ +P D E Y+HR+GRTGR GKEG
Sbjct: 280 DNVMRKFRDGSIDVLVATDVAARGLDVSGVTHVINFDLPQDPESYVHRIGRTGRAGKEGA 339
Query: 731 GVLLLAPWE---EYFLDDLKDLPLDKLQLPHLNPEIQ 764
+ P E +F++ + + + +P L I+
Sbjct: 340 AYTFVTPREIDHLHFIEKITRHKISRKPMPSLAEAIE 376
>gi|91782534|ref|YP_557740.1| ATP-dependent RNA helicase 2 [Burkholderia xenovorans LB400]
gi|91686488|gb|ABE29688.1| Putative ATP-dependent RNA helicase 2 [Burkholderia xenovorans
LB400]
Length = 491
Score = 206 bits (524), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 132/377 (35%), Positives = 207/377 (54%), Gaps = 14/377 (3%)
Query: 377 SQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLP 436
S FD+ G++P +KA+ +GY T +QE + L G+D + A+TGTGK+ +F LP
Sbjct: 9 STSTFDQFGLAPDILKAVKESGYTIPTPIQEQAIPVVLAGRDMMGAAQTGTGKTASFSLP 68
Query: 437 AIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRF 496
I+ +L S+S + P+ LIL PTRELA Q+AA A K H + + GG
Sbjct: 69 IIQRLLPQASTSASPARHPVRALILTPTRELADQVAANVQAYAK-HTALRSAVVFGGVDM 127
Query: 497 KVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVE 556
+L +IL+ATPGRLLDH++ K+ L +++LVLDEAD +LD+GF D++
Sbjct: 128 NPQSEQLRRG-VEILIATPGRLLDHVQQKTA---NLGQVQILVLDEADRMLDMGFLPDLQ 183
Query: 557 NIVDCLPRRRQSLLFSATMPKELVLKREHTYI---DTVGLG-SVETPVKIKQSCLVAPHE 612
I++ LP+ RQ+LLFSAT E + K TY+ T+ + S T ++Q
Sbjct: 184 RILNLLPKERQTLLFSATFSGE-IKKLAATYLRDPQTIEVARSNSTATNVRQIVYEVAEG 242
Query: 613 LHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDR 672
+ L++E L +VIVFC++ + S L L + ++ + Q R +
Sbjct: 243 DKTGAVVQLIRERGL----KQVIVFCNSKIGASRLSRSLERDGVIATAIHGDRSQNERMQ 298
Query: 673 ISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGV 732
+ F+ + LV +DV+ARG+D ++ +V+ +P + E Y+HR+GRTGR G G+ +
Sbjct: 299 ALDAFKRGEIEALVATDVAARGLDIAELPAVINFDLPFNAEDYVHRIGRTGRAGASGDAL 358
Query: 733 LLLAPWEEYFLDDLKDL 749
L +P E L D++ L
Sbjct: 359 SLCSPNERKQLADIEKL 375
>gi|386712716|ref|YP_006179038.1| DEAD/DEAH box helicase [Halobacillus halophilus DSM 2266]
gi|384072271|emb|CCG43761.1| DEAD-box ATP-dependent RNA helicase CshA [Halobacillus halophilus
DSM 2266]
Length = 490
Score = 206 bits (524), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 138/383 (36%), Positives = 213/383 (55%), Gaps = 24/383 (6%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F+ G+S +K+L G+ + T +QE T+ LEGKD + +A+TGTGK+ AF +P +E
Sbjct: 4 FNSLGLSNPILKSLDDMGFEETTPIQEQTIPLGLEGKDVIGQAQTGTGKTAAFGIPMLEK 63
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+ K S + LI+ PTRELA Q+A E + L G+ L + GG+ +
Sbjct: 64 IDKQVKS--------VQGLIVAPTRELAIQVAEE-MNRLGKVKGVRALPIYGGSNMERQI 114
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
R L+++ QI+VATPGRLLDHI K+ ++L + VLDEAD +L++GF +D+ +I+
Sbjct: 115 RSLKTN--QIVVATPGRLLDHIRRKT---IKLQNVHTAVLDEADEMLNMGFIEDIRDILK 169
Query: 561 CLPRRRQSLLFSATMPKEL--VLKREHTYIDTVGLGSVETPVK-IKQSCLVAPHELHFQI 617
LP RQ+LLFSATMPKE+ + + V + S E V+ I+Q + P + F
Sbjct: 170 ALPEERQTLLFSATMPKEIRDIATTLMNNPEEVKVKSKEMTVENIEQYFVEIPEKHKFDT 229
Query: 618 LHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEF 677
L LL H P IVF T + L+ + ++ Q R +F
Sbjct: 230 LTRLLDIH---DPAL-AIVFGRTKRRVDEVADGLQARGFSAEGIHGDLTQGKRMSTLNKF 285
Query: 678 RASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLAP 737
+ + ILV +DV+ARG+D +V+ V IP D E Y+HR+GRTGR G++GE + + P
Sbjct: 286 KRGRIEILVATDVAARGLDISEVSHVYNFDIPQDPESYVHRIGRTGRAGRKGESISFVTP 345
Query: 738 WEEYFLDDLKDLP---LDKLQLP 757
E+ L+ ++ L +++L++P
Sbjct: 346 REKDQLNLIEKLTKKKVERLKVP 368
>gi|384491674|gb|EIE82870.1| ATP-dependent RNA helicase HAS1 [Rhizopus delemar RA 99-880]
Length = 765
Score = 206 bits (524), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 153/484 (31%), Positives = 250/484 (51%), Gaps = 30/484 (6%)
Query: 351 IRKEISKNKLNGNGEKKEKREEEPILSQKRFDECGISPLTIKALTAAGYIQMTRVQEATL 410
++K+ +NK + E +++ ++ + F+ T A+ + +MT VQ T+
Sbjct: 278 LKKQKQENKDSTEIELGQQQNQDNVPVNYDFESLDCCDRTKNAIKDLAFEKMTEVQARTI 337
Query: 411 SACLEGKDAVVKAKTGTGKSIAFLLPAIEAV--LKATSSSTTQLVPPIYVLILCPTRELA 468
+ G+D + AKTG+GK++AFL+PA+E + LK + T +I+ PTRELA
Sbjct: 338 PPLMAGRDVLGAAKTGSGKTLAFLIPAVEMLYRLKFKPRNGTG------AIIVSPTRELA 391
Query: 469 SQIAAEAIALLKNHD-GIGVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSG 527
QI A LLK H G++ +GG K + +L ++VATPGRLLDH++N G
Sbjct: 392 LQIFGVAKELLKYHQMTFGIV--IGGANRKAEADKLVKG-VNLIVATPGRLLDHLQNTRG 448
Query: 528 LSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQSLLFSATMPKE------LVL 581
+ LK L++DEAD +L++GF +++ I+ LP RQ++LFSAT + + L
Sbjct: 449 FVYK--NLKALIIDEADRILEIGFEEEMRQIIKILPSERQTMLFSATQTTKVQDLARISL 506
Query: 582 KREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTG 641
K+ YI+ T ++Q +V + F +L L++++ KVIVF S+
Sbjct: 507 KKGPLYINVHENRDTSTADGLEQGYVVCDSDRRFLLLFTFLRKNL----KKKVIVFFSSC 562
Query: 642 MVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVT 701
LL + + V ++ ++ Q R E+ ++R IL+ +DV+ARG+D P V
Sbjct: 563 NSVKYHAELLNYIDVPVLALHGKQKQQKRTNTFFEYCNAERGILLCTDVAARGLDIPAVD 622
Query: 702 SVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLAPWEEYFLDDLKD--LPLDKLQLPHL 759
++Q P D YIHR+GRT R G +G+ +L L P E FL LK +PL++ Q P
Sbjct: 623 WIIQFDPPDDPRDYIHRVGRTARAGGQGKSLLFLLPSELGFLRYLKHAKVPLNEYQFPSN 682
Query: 760 N-PEIQLQMDNHMAK--IDNNVKEAAYHAWLGYYNSIREIGRDKTTLVELANKFAQSIGL 816
+Q Q++ + K N + Y ++L Y+S ++LA K A++ G
Sbjct: 683 KIANVQGQLEKLIDKNYYLNQSAKDGYRSYLQAYSSFSLKKIFDINSLDLA-KVAKAFGF 741
Query: 817 QRPP 820
PP
Sbjct: 742 SSPP 745
>gi|402814213|ref|ZP_10863807.1| DEAD-box ATP-dependent RNA helicase CshA [Paenibacillus alvei DSM
29]
gi|402508060|gb|EJW18581.1| DEAD-box ATP-dependent RNA helicase CshA [Paenibacillus alvei DSM
29]
Length = 487
Score = 206 bits (524), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 130/358 (36%), Positives = 194/358 (54%), Gaps = 21/358 (5%)
Query: 391 IKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTT 450
+ L G T VQ T+ L G+D V +A+TGTGK++AFLLP I+ + ++
Sbjct: 2 VHTLNQNGIAVPTPVQAETIPVVLSGEDVVSQAQTGTGKTLAFLLPIIQRIDAGSTH--- 58
Query: 451 QLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQI 510
+ LI+ PTRELA QI AEA L+ ++G+ VL + GG + R+L+ Q+
Sbjct: 59 -----VQALIVAPTRELALQITAEAKKLIGAYEGVNVLAVYGGQDVERQMRKLQGGR-QL 112
Query: 511 LVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQSLL 570
++ TPGRLLDH+ + + L +K LVLDEAD +L +GF +VE I+ P RQ+LL
Sbjct: 113 VIGTPGRLLDHLRRGT---ISLSKVKTLVLDEADQMLHMGFLGEVEEIIRQTPTNRQTLL 169
Query: 571 FSATMP---KELVLKREHTYIDTVGLGSVETPVK-IKQSCLVAPHELHFQILHHLLKEHI 626
FSATMP + L + + ID + + S VK +KQ + L L+ EH
Sbjct: 170 FSATMPANVRRLAERFMRSPID-IHVQSERITVKNVKQIVVQTTDRAKQATLCKLIDEH- 227
Query: 627 LGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEFRASKRLILV 686
Y+ I+FC T S L L E+ + E++ Q R+++ E FR K +LV
Sbjct: 228 ---RPYQAIIFCRTKRRASKLNEELLELGYDSDELHGDLSQSKREQVMERFRNVKMQLLV 284
Query: 687 TSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLAPWEEYFLD 744
+DV+ARG+D +T V +P D + YIHR+GRTGR G +G + +P + ++
Sbjct: 285 ATDVAARGLDVEGITHVFNYDVPQDAKSYIHRIGRTGRAGAQGIAITFASPRDRMAVE 342
>gi|383786573|ref|YP_005471142.1| DNA/RNA helicase [Fervidobacterium pennivorans DSM 9078]
gi|383109420|gb|AFG35023.1| DNA/RNA helicase, superfamily II [Fervidobacterium pennivorans DSM
9078]
Length = 548
Score = 206 bits (524), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 141/413 (34%), Positives = 216/413 (52%), Gaps = 33/413 (7%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEG-KDAVVKAKTGTGKSIAFLLPAIE 439
F+ G+S T+ A+ GY Q T +Q+ L LE KD + +A+TGTGK+ AF +P +E
Sbjct: 16 FEVFGLSKETLSAIEKKGYTQPTEIQKLVLPVALETDKDIIAQAQTGTGKTAAFAIPILE 75
Query: 440 AVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVD 499
V S I LI+ PTRELA QI E I LK + I V T+ GG +
Sbjct: 76 LVDFKVDKS-------IKALIVTPTRELALQIYEE-IKSLKGNRRIKVATVYGGQSMERQ 127
Query: 500 QRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIV 559
+ L + I+V TPGRLLDHI K+ + L +K LVLDEAD +LD+GF DV I+
Sbjct: 128 LKDL-ARGIDIVVGTPGRLLDHINRKT---LDLSNVKYLVLDEADRMLDMGFLDDVLEII 183
Query: 560 DCLPRRRQSLLFSATMPKELV-----LKREHTYIDTVGLGSVETPVKIKQSCLVAPHELH 614
P +++ LFSATMPKE+V +++ +I TV ++ +L+
Sbjct: 184 KQTPETKRTFLFSATMPKEIVSIARKFMKDYEHISTVK----------EELTTENAEQLY 233
Query: 615 FQILHH----LLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYR 670
F+I LL I P++ IVFC T + L ++ N ++ Q R
Sbjct: 234 FEIEEDDKLPLLCRIIDMNPEFYGIVFCQTKAEVDEIARKLSDLGYNADGLHGDYSQSQR 293
Query: 671 DRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGE 730
+R+ ++F+ + ILVT+DV+ARG+D +T V+ +P D E Y+HR+GRTGR GK+G
Sbjct: 294 ERVLDKFKKKQLNILVTTDVAARGIDIEGLTHVINYSVPRDPEYYVHRIGRTGRAGKKGL 353
Query: 731 GVLLLAPWEEYFLDDLKDLPLDKLQLPHLNPEIQLQMDNHMAKIDNNVKEAAY 783
+ + + Y +K K+ + P ++ ++ + + N +K+ +Y
Sbjct: 354 AITFVTRSDYYHFTRVKRFTKAKIAKDKI-PMVEDILNRQLENVVNTIKKESY 405
>gi|375107094|ref|ZP_09753355.1| DNA/RNA helicase, superfamily II [Burkholderiales bacterium
JOSHI_001]
gi|374667825|gb|EHR72610.1| DNA/RNA helicase, superfamily II [Burkholderiales bacterium
JOSHI_001]
Length = 457
Score = 206 bits (524), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 131/367 (35%), Positives = 197/367 (53%), Gaps = 26/367 (7%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F + G++ + AL AGY + T VQ A + L G+D +V A+TG+GK+ AF+LPA++
Sbjct: 28 FAQLGLAKELLFALDKAGYTEPTPVQAAAIGPALAGRDLLVSAQTGSGKTAAFVLPALQR 87
Query: 441 VLKATSSSTT-----QLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTR 495
+L+A Q+ P VL+L PTRELA Q+ A+ + G+ V +LVGG
Sbjct: 88 ILEARRDPAQRRPKGQVSGP-RVLVLAPTRELAQQVTQAAVTYGRGVQGLRVASLVGGVP 146
Query: 496 FKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDV 555
+ + L P IL+ATPGRL+D + + S + L ++ LVLDEAD +LD+GF D+
Sbjct: 147 YHAQLKALRG-PLDILIATPGRLMDLMGSGSAV---LASVQTLVLDEADRMLDMGFIDDI 202
Query: 556 ENIVDCLPRRRQSLLFSAT-------MPKELVLKREHTYIDTVGLGSVETPVKIKQSCLV 608
I LP RQ+++FSAT + +EL + +D+ ET +I+Q
Sbjct: 203 HFIAQALPTERQTVMFSATFGGHVGNLARELTRDPQRIAVDS----HTETHAQIEQRLYW 258
Query: 609 APHELHFQILHHLLKEHILGTPDY-KVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQ 667
A LH H L EH+L D + +VF +T + L ++ V ++ PQ
Sbjct: 259 ADGMLH----KHKLLEHLLADRDLDQAVVFTATQRDADEVADKLAQIGHAVAALHGGMPQ 314
Query: 668 LYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGK 727
R R+ R +LV +DV+ARG+D P +T V+ G+P E Y+HR+GRTGR G+
Sbjct: 315 GRRTRVLNALRMGHLRVLVATDVAARGIDVPGITHVINHGLPMKAEDYVHRIGRTGRAGR 374
Query: 728 EGEGVLL 734
G + L
Sbjct: 375 NGMAITL 381
>gi|374367571|ref|ZP_09625632.1| helicase [Cupriavidus basilensis OR16]
gi|373100874|gb|EHP41934.1| helicase [Cupriavidus basilensis OR16]
Length = 496
Score = 206 bits (524), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 130/372 (34%), Positives = 193/372 (51%), Gaps = 8/372 (2%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
FD G+ +AL+ GY + T +QE + L+GKD + A+TGTGK+ F LP I+
Sbjct: 15 FDSFGLDARIQRALSEQGYTKPTPIQEQAIPVVLQGKDVMGAAQTGTGKTAGFALPIIQR 74
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+L S+S + P+ L+L PTRELA Q+ + +A + + GG
Sbjct: 75 LLPLASASASPARHPVRALMLTPTRELADQVY-DNVARYARFTDLRSTVVFGGVDMNPQT 133
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
L +ILVATPGRLLDH++ KS V L ++MLVLDEAD +LD+GF D++ I++
Sbjct: 134 EALRRG-VEILVATPGRLLDHVQQKS---VNLSQVQMLVLDEADRMLDMGFLPDLQRIIN 189
Query: 561 CLPRRRQSLLFSATMPKE---LVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQI 617
LP +RQ+LLFSAT E L H + S ++Q+
Sbjct: 190 LLPAQRQTLLFSATFSSEIKRLAASYLHQPVTIEVARSNSANENVRQTVFQVEDGHKQAA 249
Query: 618 LHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEF 677
+ HLLK+ + IVF ++ + S L L +N ++ K Q R + + F
Sbjct: 250 VVHLLKKRAAEGLSRQCIVFVNSKIGCSRLARHLEREGINAAAIHGDKTQTERMQTLDGF 309
Query: 678 RASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLAP 737
+ LV +DV+ARG+D PD+ V+ +P E YIHR+GRTGR G G+ + + P
Sbjct: 310 KQGNIDALVATDVAARGLDIPDMPCVINFDLPFSAEDYIHRIGRTGRAGASGDALSIYVP 369
Query: 738 WEEYFLDDLKDL 749
+E L D++ L
Sbjct: 370 ADERLLVDIEKL 381
>gi|241956021|ref|XP_002420731.1| ATP-dependent RNA helicase, putative [Candida dubliniensis CD36]
gi|223644073|emb|CAX41816.1| ATP-dependent RNA helicase, putative [Candida dubliniensis CD36]
Length = 556
Score = 206 bits (524), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 151/429 (35%), Positives = 230/429 (53%), Gaps = 34/429 (7%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F+ +S T++A+ G+ +MT+VQ T+ L G+D + AKTG+GK++AFL+PAIE
Sbjct: 101 FENADLSEPTMRAIKEMGFTKMTKVQAKTIPPLLAGRDVLGAAKTGSGKTLAFLIPAIEL 160
Query: 441 V--LKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHD-GIGVLTLVGGTRFK 497
+ LK + T V+I+ PTRELA QI A L++ H G++ +GG +
Sbjct: 161 LYSLKIKPRNGTA------VIIITPTRELALQIFGVARELMQFHSQTCGIV--IGGADRR 212
Query: 498 VDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVEN 557
+ +L S +LVATPGRLLDH++N + LK LV+DEAD +L++GF +++
Sbjct: 213 QEATKL-SKGVNLLVATPGRLLDHLKNTQFV---FSNLKALVIDEADRILEIGFEDEMKQ 268
Query: 558 IVDCLPRR-RQSLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSCLVAP 610
I+ LP RQS+LFSAT + + L+ YI+ V V T ++Q +V
Sbjct: 269 IIKVLPNENRQSMLFSATQTTKVEDLARISLRPGPLYINVVPEKDVSTADGLEQGYVVCD 328
Query: 611 HELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYR 670
+ F +L LK ++ K+IVF S+ LL + + V +++ ++ Q R
Sbjct: 329 SDKRFLLLFSFLKRNV----KKKIIVFLSSCNSVKFYSELLNYIDLPVLDLHGKQKQQKR 384
Query: 671 DRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGE 730
EF +K+ ILV +DV+ARG+D P V +VQ P D YIHR+GRT R G +G+
Sbjct: 385 TNTFFEFCNAKQGILVCTDVAARGLDIPAVDWIVQFDPPDDPRDYIHRVGRTAR-GTQGK 443
Query: 731 G--VLLLAPWEEYFLDDLK--DLPLDKLQLPH---LNPEIQLQMDNHMAKIDNNVKEAAY 783
G ++ L P E FL LK +PL++ + P N + QL + N + Y
Sbjct: 444 GKSLMFLTPSELGFLRYLKAAKVPLNEYEFPANKIANIQSQLTKLIKTNYLLNQSAKDGY 503
Query: 784 HAWLGYYNS 792
A+L Y S
Sbjct: 504 RAYLQAYAS 512
>gi|440297918|gb|ELP90559.1| DEAD box ATP-dependent RNA helicase, putative [Entamoeba invadens
IP1]
Length = 705
Score = 206 bits (524), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 129/378 (34%), Positives = 203/378 (53%), Gaps = 25/378 (6%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
K+F E IS T+K+LT G+ MT +Q A + CL G+D + AKTG+GK++++L+P I
Sbjct: 51 KKFSEFPISKETLKSLTENGFTVMTPIQRAIIPHCLIGRDVIGAAKTGSGKTLSYLIPLI 110
Query: 439 EAVLKATSSSTTQLVPPIYVLILCPTRELASQI--AAEAIALLKNHDGIGVLTLVGGTRF 496
E + ++ L L++ PTRELA QI IA D + GG
Sbjct: 111 EYMYRSQWFERGGLC----ALVMAPTRELAQQIFDVYSKIA----GDKYNAALITGGKDE 162
Query: 497 KVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVE 556
K++ + L LV TPGRLL H+EN +V L+ LVLDEAD +LD+GF+K++
Sbjct: 163 KLEAKALYQ--TNFLVCTPGRLLYHLENTPKFNV--TPLRFLVLDEADRILDMGFKKELT 218
Query: 557 NIVDCLPRRRQSLLFSATMPKEL--VLKREHTYIDTVGL---GSVETPVKIKQSCLVAPH 611
+I+D LP++RQ+LLFSAT K + +++ T+ + + + TP +KQ CL+
Sbjct: 219 SILDYLPKKRQTLLFSATQTKSVKDLIRLSLTHPEFISVDEQSEFSTPENLKQFCLILKE 278
Query: 612 ELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK--MNVREMYSRKPQLY 669
+L LK H + K+IVF T + ++++ + + +Y ++
Sbjct: 279 RQKVNVLFSFLKTHT----NSKIIVFFQTCKQVRFFFETFKQLRCGLELNLLYGKQSANS 334
Query: 670 RDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEG 729
R E F +R L +D+++RG+D +V ++Q P D QYIHR GRT R K G
Sbjct: 335 RYSRYESFAELERGALFCTDIASRGLDVKNVDWIIQYDCPEDTAQYIHRAGRTARYNKAG 394
Query: 730 EGVLLLAPWEEYFLDDLK 747
+LLL+ + F++ L+
Sbjct: 395 NALLLLSEQQSSFVEKLQ 412
>gi|390456495|ref|ZP_10242023.1| DEAD-box ATP-dependent RNA helicase ydbR [Paenibacillus peoriae
KCTC 3763]
Length = 526
Score = 206 bits (524), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 133/363 (36%), Positives = 196/363 (53%), Gaps = 22/363 (6%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F E + P I+A+T G+ + T +Q ++ L+GKD + +A+TGTGK+ AF +P I
Sbjct: 4 FAEFDLEPKVIQAITELGFEEATPIQAISIPIALQGKDMIGQAQTGTGKTAAFGIPLISK 63
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+ K I LI+ PTRELA Q+A E I L G+ L + GG
Sbjct: 64 ISKNDEK--------IRALIMAPTRELAIQVAEE-IEKLSRFKGLRTLPIYGGQDIVRQI 114
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
R L+ P QI++ TPGRLLDHI K+ ++L + +VLDEAD +LD+GF +D+++I+
Sbjct: 115 RALKKKP-QIIIGTPGRLLDHINRKT---IKLEDVNTVVLDEADEMLDMGFMEDIQSILK 170
Query: 561 CLPRRRQSLLFSATMPKELVLKREHTYID----TVGLGSVETPVKIKQSCLVAPHELHFQ 616
+P RQ++LFSATMP + E D +V V P+ I+Q+ + P F+
Sbjct: 171 QVPDERQTMLFSATMPPNIKRLAEQFLKDPEHVSVIPKQVSAPL-IEQAYIEVPERQKFE 229
Query: 617 ILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEE 676
L L+ + +P+ IVF T L L++ + ++ Q RD + +
Sbjct: 230 ALSRLID---MESPEL-AIVFGRTKRRVDELAEALQKRGYSADGLHGDLSQNQRDAVMRK 285
Query: 677 FRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLA 736
FR +LV +DV+ARG+D VT VV +P D E Y+HR+GRTGR GKEGE +
Sbjct: 286 FRDGSIDVLVATDVAARGLDVSGVTHVVNFDLPQDPESYVHRIGRTGRAGKEGEAWSFVT 345
Query: 737 PWE 739
P E
Sbjct: 346 PRE 348
>gi|403215528|emb|CCK70027.1| hypothetical protein KNAG_0D02780 [Kazachstania naganishii CBS
8797]
Length = 476
Score = 206 bits (524), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 158/457 (34%), Positives = 244/457 (53%), Gaps = 34/457 (7%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F +S T+KA+ G+ +MT VQE T+ L GKD + AKTG+GK++AFL+PAIE
Sbjct: 11 FSSLELSAPTMKAIEKMGFTKMTTVQERTIPPLLAGKDVLGAAKTGSGKTLAFLIPAIET 70
Query: 441 V--LKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHD-GIGVLTLVGGTRFK 497
+ LK + T V+++ PTRELA QI L++ H G++ +GG +
Sbjct: 71 LHALKFKPRNGTG------VIVITPTRELALQIFGVVRELMEFHSQTFGIV--IGGANRR 122
Query: 498 VDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVEN 557
+ +L + IL+ATPGRLLDH++N G + LK LV+DEAD +L++GF +++
Sbjct: 123 QEAEKL-AKGVNILIATPGRLLDHLQNTKGFVFK--NLKALVIDEADRILEIGFEDEMKQ 179
Query: 558 IVDCLP-RRRQSLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSCLVAP 610
I+ LP RQS+LFSAT + + L++ +I+ V T ++Q +V
Sbjct: 180 IIRILPNEERQSMLFSATQTTKVEDLARISLRKGPLFINVVPETDHSTADGLEQGYVVCE 239
Query: 611 HELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYR 670
+ F +L LK + KVIVF S+ LL + + V E++ ++ Q R
Sbjct: 240 SDKRFLLLFSFLKRN----QKKKVIVFLSSCNSVKYYAELLNYIDLPVLELHGKQKQQKR 295
Query: 671 DRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGK-EG 729
EF ++R ILV +DV+ARG+D P V +VQ P D YIHR+GRT R K +G
Sbjct: 296 TNTFFEFCNAERGILVCTDVAARGLDIPAVDWIVQFDPPDDPRDYIHRVGRTARGTKGKG 355
Query: 730 EGVLLLAPWEEYFLDDLK--DLPLDKLQLPHLN-PEIQLQMDNHMAKIDNNVKEAA---Y 783
+ ++ L P E FL LK +PL++ + P +Q Q++ + K + + + A Y
Sbjct: 356 KSLMFLIPNELGFLRYLKAAKVPLNEYEFPQNKIANVQSQLEK-LIKSNYYLHQTAKDGY 414
Query: 784 HAWLGYYNSIREIGRDKTTLVELANKFAQSIGLQRPP 820
++L Y+S + ++LA K A+S G PP
Sbjct: 415 RSYLQAYSSHSLKTVYQIDKLDLA-KVAKSYGFPVPP 450
>gi|449703755|gb|EMD44146.1| ATP-dependent RNA helicase, putative [Entamoeba histolytica KU27]
Length = 546
Score = 206 bits (523), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 153/482 (31%), Positives = 258/482 (53%), Gaps = 27/482 (5%)
Query: 352 RKEISKNKLNGNGEKKEKRE--EEPILSQKRFDECGISPLTIKALTAAGYIQMTRVQEAT 409
++EI++NK E +EK + L+ + +S KAL AGY +MT +Q +
Sbjct: 56 KEEINQNKTKSKEENEEKTKGTTSSFLTDIEYKSLNLSEEIQKALEEAGYTKMTTIQARS 115
Query: 410 LSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELAS 469
+ L GKD + KA+TG+GK++AFL+P +E +L T I I+ PTRELA
Sbjct: 116 IPLLLMGKDIMAKARTGSGKTLAFLIPIVE-ILNKIHFQTRNGTGAI---IISPTRELAI 171
Query: 470 QIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLS 529
Q +L + + L ++GG+ K ++ L+ I+VATPGRLLDHI N
Sbjct: 172 QTFDVLEKILAHSERTRTL-IIGGSSKKKEEEALKKG-ASIVVATPGRLLDHIINTKCFI 229
Query: 530 VRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQSLLFSATMPKEL-----VLKRE 584
R LK LV+DEAD ++++GF +++ I++ LP+ RQ++LFSAT +++ + ++
Sbjct: 230 YR--NLKCLVIDEADRIMEVGFEEEMRQILNRLPKNRQTMLFSATQSEKVDDIANISLKQ 287
Query: 585 HTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVT 644
I+ ++ T K++Q ++ + F++L+ L+++ + K IVF S+
Sbjct: 288 PVVINVESQSTISTSSKLEQGYVLIEAKDRFRLLYTFLRKN----KNKKTIVFMSSCKAV 343
Query: 645 SLLYLLLREMKMNVREMYSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVV 704
LL + + V+ ++ + Q R ++ EF +K IL+T+D++ARG+D P V ++
Sbjct: 344 KFYSDLLNYIDIPVKALHGQLDQDKRTKVFFEFCKAKEAILITTDIAARGLDIPAVDWII 403
Query: 705 QVGIPPDREQYIHRLGRTGREGKEGEGVLLLAPWEEYFLDDLK--DLPLDKLQLPHLN-P 761
QV +P + YIHR+GRT R +G +L + P E L+ LK +PL + ++P
Sbjct: 404 QVDLPDSPKDYIHRVGRTARADTKGRALLFVQPCEIRILEYLKGEKIPLTQYEVPEKKIA 463
Query: 762 EIQLQMDNHMAK--IDNNVKEAAYHAWLGYYNSIREIGRDKTTLVEL-ANKFAQSIGLQR 818
IQ +++ + K N + Y A++ YNS R + +D + +L A S GL
Sbjct: 464 NIQRELEKLVEKNYYLNTEAKDGYKAYIMAYNS-RSL-KDVFNVNDLDIGGLALSFGLTN 521
Query: 819 PP 820
PP
Sbjct: 522 PP 523
>gi|406035468|ref|ZP_11042832.1| ATP-dependent RNA helicase [Acinetobacter parvus DSM 16617 = CIP
108168]
Length = 657
Score = 206 bits (523), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 130/395 (32%), Positives = 208/395 (52%), Gaps = 22/395 (5%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
K F E + +AL G+ T VQE + A L GKD +V ++TG+GK+ AFLLP +
Sbjct: 3 KTFAEFSLHETLQQALEGLGFTTPTPVQEQAIPAALAGKDLLVSSQTGSGKTAAFLLPTL 62
Query: 439 EAVLKATS----SSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGT 494
A+ + + V +L++ PTRELA Q++ +AIA +++ G+ + ++GG
Sbjct: 63 NALAGEEAFVSFKDRMKAVTQPTILVISPTRELAQQVSQDAIAFVRHMKGVRIAAIMGGM 122
Query: 495 RFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKD 554
F ++L+ Q++VATPGRLLD + + ++L ++ L++DEAD +LDLGF +D
Sbjct: 123 PFGKQIQQLKG--AQVVVATPGRLLDLVNRRQ---IKLDKVESLIVDEADRMLDLGFSED 177
Query: 555 VENIVDCLPRRRQSLLFSATMPKELVLKREHTYIDTVGLGSVETPVKIKQSCLVAPH--- 611
+E I + R+Q+L+FSAT ++ E D + ++ET H
Sbjct: 178 LEAIGELAANRKQTLMFSATFADRIIRLAERMMNDPQRI-AIETGHSTNTDVTQTLHWTD 236
Query: 612 --ELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLY 669
E ++L H L + + + +VF ST T +L L E +V ++ PQ
Sbjct: 237 GFEHKKKLLTHWLSDESVD----QAVVFASTQEDTDMLAEELAEAGHSVVALHGAMPQTV 292
Query: 670 RDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEG 729
R+R R + ILV +DV+ARG+D P ++ V+ G+P E Y+HR+GRTGR G+ G
Sbjct: 293 RNRRLRSIREGRAKILVATDVAARGLDVPTISHVINFGLPMKNEDYVHRIGRTGRAGRTG 352
Query: 730 EGVLLLAPWEE---YFLDDLKDLPLDKLQLPHLNP 761
+ V L E L+D D L+ ++ L P
Sbjct: 353 QAVTLATYRERGKIRALEDYLDARLNVSEIEGLEP 387
>gi|67468731|ref|XP_650379.1| DEAD/DEAH box helicase [Entamoeba histolytica HM-1:IMSS]
gi|56466997|gb|EAL44993.1| DEAD/DEAH box helicase, putative [Entamoeba histolytica HM-1:IMSS]
Length = 542
Score = 206 bits (523), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 153/482 (31%), Positives = 258/482 (53%), Gaps = 27/482 (5%)
Query: 352 RKEISKNKLNGNGEKKEKRE--EEPILSQKRFDECGISPLTIKALTAAGYIQMTRVQEAT 409
++EI++NK E +EK + L+ + +S KAL AGY +MT +Q +
Sbjct: 52 KEEINQNKTKSKEENEEKTKGTTSSFLTDIEYKSLNLSEEIQKALEEAGYTKMTTIQARS 111
Query: 410 LSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELAS 469
+ L GKD + KA+TG+GK++AFL+P +E +L T I I+ PTRELA
Sbjct: 112 IPLLLMGKDIMAKARTGSGKTLAFLIPIVE-ILNKIHFQTRNGTGAI---IISPTRELAI 167
Query: 470 QIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLS 529
Q +L + + L ++GG+ K ++ L+ I+VATPGRLLDHI N
Sbjct: 168 QTFDVLEKILAHSERTRTL-IIGGSSKKKEEEALKKG-ASIVVATPGRLLDHIINTKCFI 225
Query: 530 VRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQSLLFSATMPKEL-----VLKRE 584
R LK LV+DEAD ++++GF +++ I++ LP+ RQ++LFSAT +++ + ++
Sbjct: 226 YR--NLKCLVIDEADRIMEVGFEEEMRQILNRLPKNRQTMLFSATQSEKVDDIANISLKQ 283
Query: 585 HTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVT 644
I+ ++ T K++Q ++ + F++L+ L+++ + K IVF S+
Sbjct: 284 PVVINVESQSTISTSSKLEQGYVLIEAKDRFRLLYTFLRKN----KNKKTIVFMSSCKAV 339
Query: 645 SLLYLLLREMKMNVREMYSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVV 704
LL + + V+ ++ + Q R ++ EF +K IL+T+D++ARG+D P V ++
Sbjct: 340 KFYSDLLNYIDIPVKALHGQLDQDKRTKVFFEFCKAKEAILITTDIAARGLDIPAVDWII 399
Query: 705 QVGIPPDREQYIHRLGRTGREGKEGEGVLLLAPWEEYFLDDLK--DLPLDKLQLPHLN-P 761
QV +P + YIHR+GRT R +G +L + P E L+ LK +PL + ++P
Sbjct: 400 QVDLPDSPKDYIHRVGRTARADTKGRALLFVQPCEIRILEYLKGEKIPLTQYEVPEKKIA 459
Query: 762 EIQLQMDNHMAK--IDNNVKEAAYHAWLGYYNSIREIGRDKTTLVEL-ANKFAQSIGLQR 818
IQ +++ + K N + Y A++ YNS R + +D + +L A S GL
Sbjct: 460 NIQRELEKLVEKNYYLNTEAKDGYKAYIMAYNS-RSL-KDVFNVNDLDIGGLALSFGLTN 517
Query: 819 PP 820
PP
Sbjct: 518 PP 519
>gi|339625011|ref|ZP_08660800.1| putative ATP-dependent RNA helicase [Fructobacillus fructosus KCTC
3544]
Length = 534
Score = 206 bits (523), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 147/417 (35%), Positives = 221/417 (52%), Gaps = 46/417 (11%)
Query: 380 RFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIE 439
+F+E G+S ++++ A GY++ T +QE T+ L GKD + +A+TGTGK+ AF LP +E
Sbjct: 16 KFEELGLSKAILQSIAAHGYVEATPIQEKTIPLTLAGKDVIGQAQTGTGKTAAFGLPILE 75
Query: 440 AVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVD 499
+ P I +I+ PTRELA Q AE + L + + V + GG+ +
Sbjct: 76 HIDLDN--------PNIQAVIISPTRELAIQ-TAEELKKLGSDKHVNVQVVFGGSDIRRQ 126
Query: 500 QRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIV 559
+ L+S P QILV TPGRLLDHI K+ +L ++ LVLDEAD +L++GF D+E I+
Sbjct: 127 IQGLKSHP-QILVGTPGRLLDHINRKTA---KLGHVQTLVLDEADEMLNMGFLDDIEAII 182
Query: 560 DCLPRRRQSLLFSATMPKELVLKREHTYIDTVGLGSVETPVKIK------------QSCL 607
+P+ RQ+LLFSATMP I +G + PV +K Q +
Sbjct: 183 AQVPKERQTLLFSATMPDS---------IRRIGEKFMTNPVMVKIEAKQLTTDLVEQYFI 233
Query: 608 VAPHELHFQILHHLL--KEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRK 665
+E F L + +E LG IVF T L L ++
Sbjct: 234 RCRNEEKFDALTRTIDIQEPYLG------IVFGRTKRRVEELARGLEARGYRAAGLHGDL 287
Query: 666 PQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGRE 725
Q R R+ ++F++ + +LV +DV+ARG+D DV+ V IP D E Y+HR+GRTGR
Sbjct: 288 TQQMRSRVLDQFKSHEINLLVATDVAARGLDVKDVSHVYNFDIPQDPESYVHRIGRTGRA 347
Query: 726 GKEGEGVLLLAPWEEYFLDDLKDLPLDKLQLPHLNPEIQLQMDNHMAKIDNNVKEAA 782
G G V L+AP E +L +++ L K ++ + P LQ + + +ID ++ EAA
Sbjct: 348 GATGTSVTLVAPNEMDYLRAIEE--LTKKRMTPMQPAT-LQ-EARLGRIDASLDEAA 400
>gi|444311371|ref|ZP_21146981.1| DEAD/DEAH box helicase [Ochrobactrum intermedium M86]
gi|443485287|gb|ELT48079.1| DEAD/DEAH box helicase [Ochrobactrum intermedium M86]
Length = 484
Score = 206 bits (523), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 134/380 (35%), Positives = 202/380 (53%), Gaps = 17/380 (4%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F E G+SP + A+ AAGY T +Q + LE KD + A+TGTGK+ +F+LP +
Sbjct: 4 FAELGLSPKVLAAVEAAGYTAPTPIQAGAIPPALERKDVLGIAQTGTGKTASFVLPMLTL 63
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+ K + + LIL PTRELA+Q+ E A + + V L+GG F +
Sbjct: 64 LEKGRARARMP-----RTLILEPTRELAAQVE-ENFAKYGINQRLNVALLIGGVSFDDQE 117
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
R+LE +L+ATPGRLLDH E L L G+++LV+DEAD +LD+GF D+E I
Sbjct: 118 RKLERG-ADVLIATPGRLLDHFERGKLL---LTGVEILVIDEADRMLDMGFIPDIERICK 173
Query: 561 CLPRRRQSLLFSATMPKELV-LKREHTYIDT-VGLGSVETPVKIKQSCLVAPHELHFQ-- 616
+P RQ+L FSATMP E+ L + + T V + + K LV + +
Sbjct: 174 LIPFTRQTLFFSATMPPEITKLTEQFLHSPTRVEVAKASSTAKTVTQRLVKSTKKDWDKR 233
Query: 617 -ILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISE 675
+L L++ G I+FC+ S L+ L + N ++ Q R +
Sbjct: 234 AVLRDLIRAE--GDTLKNAIIFCNRKKDVSELFRSLTRHEFNAGALHGDMDQRARMTMLS 291
Query: 676 EFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLL 735
F+ K +LV SDV+ARG+D PDV+ V IP E Y+HR+GRTGR G+ G+ ++
Sbjct: 292 NFKDGKLQLLVASDVAARGLDIPDVSHVFNFDIPIHSEDYVHRIGRTGRAGRSGKAFTIV 351
Query: 736 APWEEYFLDDLKDLPLDKLQ 755
P + +L ++D+ +K++
Sbjct: 352 TPSDTKYLAAIEDMIGEKIE 371
>gi|153009579|ref|YP_001370794.1| DEAD/DEAH box helicase [Ochrobactrum anthropi ATCC 49188]
gi|151561467|gb|ABS14965.1| DEAD/DEAH box helicase domain protein [Ochrobactrum anthropi ATCC
49188]
Length = 498
Score = 206 bits (523), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 136/399 (34%), Positives = 208/399 (52%), Gaps = 20/399 (5%)
Query: 362 GNGEKKEKREEEPILSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVV 421
G + KR P+ + F E G+SP + A+ AAGY T +Q + LE KD +
Sbjct: 2 GGNHFQTKRAAPPLTT---FAELGLSPKVLAAVEAAGYSAPTPIQAGAIPPALERKDVLG 58
Query: 422 KAKTGTGKSIAFLLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKN 481
A+TGTGK+ +F+LP + + K + + LIL PTRELA+Q+ N
Sbjct: 59 IAQTGTGKTASFVLPMLTLLEKGRARARMP-----RTLILEPTRELAAQVEENFTKYGVN 113
Query: 482 HDGIGVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLD 541
H + V L+GG F +R+LE +L+ATPGRLLDH E L L G+++LV+D
Sbjct: 114 HR-LNVALLIGGVSFDEQERKLERG-ADVLIATPGRLLDHFERGKLL---LTGVEILVID 168
Query: 542 EADHLLDLGFRKDVENIVDCLPRRRQSLLFSATMPKELV-LKREHTYIDT-VGLGSVETP 599
EAD +LD+GF D+E I +P RQ+L FSATMP E+ L + + T V + +
Sbjct: 169 EADRMLDMGFIPDIERICKLIPFTRQTLFFSATMPPEITKLTEQFLHSPTRVEVAKASST 228
Query: 600 VKIKQSCLVAPHELHFQ---ILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKM 656
K LV + + +L L++ G I+FC+ S L+ L +
Sbjct: 229 AKTVTQRLVKSSKKDWDKRAVLRDLVRAE--GDTLKNAIIFCNRKKDVSELFRSLTRHEF 286
Query: 657 NVREMYSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYI 716
N ++ Q R + F+ K +LV SDV+ARG+D PDV+ V +P E Y+
Sbjct: 287 NAGALHGDMDQRARMTMLANFKEGKLQLLVASDVAARGLDIPDVSHVFNFDVPIHSEDYV 346
Query: 717 HRLGRTGREGKEGEGVLLLAPWEEYFLDDLKDLPLDKLQ 755
HR+GRTGR G+ G+ ++ P + +L ++++ +K++
Sbjct: 347 HRIGRTGRAGRSGKAFTIVTPSDTKYLAAIENMIGEKIE 385
>gi|124026185|ref|YP_001015301.1| ATP-dependent RNA helicase [Prochlorococcus marinus str. NATL1A]
gi|123961253|gb|ABM76036.1| putative ATP-dependent RNA helicase [Prochlorococcus marinus str.
NATL1A]
Length = 589
Score = 206 bits (523), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 134/388 (34%), Positives = 203/388 (52%), Gaps = 24/388 (6%)
Query: 377 SQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLP 436
S+ F E S I+ ++ GY T +Q+A + L G+D V +A+TGTGK+ AF LP
Sbjct: 34 SENGFSEFNFSEELIQTISDKGYSSPTPIQKAAIPELLLGRDLVGQAQTGTGKTAAFALP 93
Query: 437 AIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRF 496
+E + K VL+L PTRELA Q+A H VL + GG+ F
Sbjct: 94 ILERLKKNVGHPQ--------VLVLAPTRELAMQVAESFRTYSAGHPHFKVLAIYGGSDF 145
Query: 497 KVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVE 556
+ +Q ++V TPGR++DH+ K+ + L LVLDEAD +L +GF DVE
Sbjct: 146 R-NQINTLRRGVDVVVGTPGRVMDHMRQKT---LNTSHLSCLVLDEADEMLRMGFIDDVE 201
Query: 557 NIVDCLPRRRQSLLFSATMPKELVLKREHTYIDTVGLGSVE-TPVK---IKQSCLVAPHE 612
I++ LP RQ +LFSATMP E + + Y+++ +++ T +K I+Q + +
Sbjct: 202 WILEQLPEERQLVLFSATMPSE-IRRLSKKYLNSPAEITIKATELKERLIRQRYISVQNV 260
Query: 613 LHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDR 672
L +L+ + VI+F T +T ++ L NV + PQ R+R
Sbjct: 261 YKVNALQRVLE----AVSEEGVIIFARTKAITIVVAEKLESYGYNVAVLNGDIPQNQRER 316
Query: 673 ISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGV 732
E R ILV +DV+ARG+D + V+ +P DRE Y+HR+GRTGR G+ GE +
Sbjct: 317 TVERLRQGSINILVATDVAARGLDVDRIGLVINYDMPFDREAYVHRIGRTGRAGRNGEAI 376
Query: 733 LLLAPWEEYFLDDLKDL---PLDKLQLP 757
L + P E FL +L+ P++K+ +P
Sbjct: 377 LFVNPRERSFLSNLERAVGQPIEKMDIP 404
>gi|452910044|ref|ZP_21958727.1| Cold-shock DEAD-box protein A [Kocuria palustris PEL]
gi|452835004|gb|EME37802.1| Cold-shock DEAD-box protein A [Kocuria palustris PEL]
Length = 606
Score = 206 bits (523), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 141/418 (33%), Positives = 217/418 (51%), Gaps = 28/418 (6%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIE- 439
F E GI + AL A GY + + +QEAT+ LEG+D V A+TGTGK+ AF +PA+
Sbjct: 17 FAELGIDARVLAALEAIGYEKPSPIQEATIPVLLEGRDVVGMAQTGTGKTAAFAVPALSR 76
Query: 440 ----AVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTR 495
A L S+ST VL+L PTRELA Q+ + + VL + GG+
Sbjct: 77 LAELADLNGPSTSTQ-------VLVLAPTRELALQVGEAFASYAVQLEDFTVLPVYGGSS 129
Query: 496 FKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDV 555
+ L Q++V TPGR++DH++ S ++L L+ LVLDEAD +L +GF +DV
Sbjct: 130 YGPQLAGLRRG-AQVVVGTPGRVIDHLKRGS---LKLDDLQYLVLDEADEMLRMGFAEDV 185
Query: 556 ENIVDCLPRRRQSLLFSATMPKELVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHF 615
E I+ P +Q LFSATMP + K Y+ E VK K S + +
Sbjct: 186 ETILSQTPEDKQVALFSATMPPA-IRKIAQRYLRN----PEEISVKAKTSTATNIRQRYL 240
Query: 616 QIL-HHLLKE--HILGTPDYK-VIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRD 671
Q++ H L+ +L ++ +IVF T T + LR + PQ R+
Sbjct: 241 QVMGAHKLEAMTRLLEVEEHDGIIVFVRTKAATEEVAEKLRARGHAATAINGDIPQQARE 300
Query: 672 RISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEG 731
+ E+ R+ K ILV +DV+ARG+D ++ VV IP D E Y+HR+GRTGR G+ G+
Sbjct: 301 KSVEQLRSGKIDILVATDVAARGLDVERISLVVNYDIPHDTESYVHRIGRTGRAGRSGDA 360
Query: 732 VLLLAPWEEYFLDDLKDL---PLDKLQLPHLNPEIQLQMDNHMAKIDNNVKEAAYHAW 786
+L + P E+Y L ++ P++++ +P + + ++D I + ++ A+
Sbjct: 361 ILFMTPREKYLLRAIEKTTRQPVEQMPMPSVEDVNRTRVDQFGQSITDTIETQDLSAF 418
>gi|164662887|ref|XP_001732565.1| hypothetical protein MGL_0340 [Malassezia globosa CBS 7966]
gi|159106468|gb|EDP45351.1| hypothetical protein MGL_0340 [Malassezia globosa CBS 7966]
Length = 542
Score = 206 bits (523), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 157/483 (32%), Positives = 248/483 (51%), Gaps = 33/483 (6%)
Query: 366 KKEKREEEPILSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKT 425
KK + E + +K F ++P T KAL A G+ MT VQE + L GKD + A+T
Sbjct: 23 KKAEASSEKLPDRKPFTALDLTPATSKALDAMGFKTMTEVQERCIPPLLAGKDVLGAAQT 82
Query: 426 GTGKSIAFLLPAIEAV--LKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHD 483
G+GK++AFL+PAIE + LK + T +++ PTRELA QI A L+ H
Sbjct: 83 GSGKTLAFLIPAIEMLQRLKFKPRNGTG------AIVISPTRELALQIFGVAKELMA-HQ 135
Query: 484 GIGVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEA 543
+ ++GG K + +L+ +++ATPGRLLDH++N G LK L++DEA
Sbjct: 136 SQTLGIIMGGANRKAEADKLQKG-VNLIIATPGRLLDHLQNTKGFV--FTNLKTLIIDEA 192
Query: 544 DHLLDLGFRKDVENIVDCLPR-RRQSLLFSATMPKE------LVLKREHTYIDTVGLGSV 596
D +L++GF ++ IV LP+ RQ++LFSAT + + L+ YI+ +
Sbjct: 193 DRILEIGFEDEMRQIVKILPQEHRQTMLFSATQTTKVQDLARISLRPGPLYINVHEQMAA 252
Query: 597 ETPVKIKQSCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKM 656
T K++Q +V + F +L LK + K+IVF ++ LL + +
Sbjct: 253 STVSKLEQGYVVCDSDKRFLLLFTFLKRN----AGKKIIVFMNSCNSVKFHGELLNYIDV 308
Query: 657 NVREMYSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYI 716
V +++ ++ Q R EF ++ L+ +DV+ARG+D P V ++Q P D YI
Sbjct: 309 PVLDLHGKQKQQKRSNTFFEFCNAESGTLLCTDVAARGLDIPAVDWIIQYDPPDDPRDYI 368
Query: 717 HRLGRTGREGKEGEGVLLLAPWEEYFLDDLK--DLPLDKLQL-PHLNPEIQLQMDNHMAK 773
HR+GRT R GK G +L L P E FL LK +PL++ P+ +Q Q++ ++K
Sbjct: 369 HRVGRTARGGKHGRSLLFLLPSELGFLRFLKVAKVPLNEYTFPPNKIANVQNQLEKLISK 428
Query: 774 ---IDNNVKEAAYHAWLGYYNSIREIGRDKTTLVELANKFAQSIGLQRPPPLFRKTALKM 830
+ + KE Y +++ Y S ++LA K A++ G PP + +
Sbjct: 429 NYYLHQSAKE-GYRSYIQAYGSYSLKRIYDIHQLDLA-KVAKAFGFAVPPKV--NVTIGT 484
Query: 831 GLK 833
GLK
Sbjct: 485 GLK 487
>gi|388580865|gb|EIM21177.1| DEAD-domain-containing protein [Wallemia sebi CBS 633.66]
Length = 581
Score = 206 bits (523), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 152/465 (32%), Positives = 243/465 (52%), Gaps = 48/465 (10%)
Query: 382 DECGISPL-----TIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLP 436
++C S L T A+ G+ QMT VQ T+ + G+D + A TG+GK++AFL+P
Sbjct: 54 EQCSFSNLDLTDGTRSAIEEMGFSQMTEVQAKTIPPLMAGRDVLGAAHTGSGKTLAFLIP 113
Query: 437 AIEAVLKATSSSTTQLVP--PIYVLILCPTRELASQIAAEAIALLKNHD-GIGVLTLVGG 493
AIE + S P +++ PTRELA QI A ++KNH+ G+ ++GG
Sbjct: 114 AIEML------SRLHFKPRNGTGAIVISPTRELALQIFGVAKDIMKNHNQTFGI--IMGG 165
Query: 494 TRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRK 553
K + +L+ +++ATPGRLLDH++N G +K L++DEAD +L++GF +
Sbjct: 166 ANRKAEADKLQKG-VNLIIATPGRLLDHLQNTKGFV--FSNMKSLIIDEADRILEIGFEE 222
Query: 554 DVENIVDCLP-RRRQSLLFSATMPKELV------LKREHTYIDTVGLGSVETPVKIKQSC 606
++ IV LP RQ++LFSAT ++ L++ YI+ S T +++Q
Sbjct: 223 EMRQIVKILPTENRQTMLFSATQTTKVTDLARVSLRQGPLYINVHEERSAATNEQLEQGY 282
Query: 607 LVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKP 666
+V ++ F +L LK+++ KVIVF S+ LL + + V +++ ++
Sbjct: 283 VVCESDMRFLLLFTFLKKNL----KKKVIVFFSSCNSVKYHGELLNYIDIPVLDLHGKQK 338
Query: 667 QLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREG 726
Q R EF + IL+ +DV+ARG+D P V ++Q P D YIHR+GRT R G
Sbjct: 339 QQKRTNTFFEFCNAPNGILLCTDVAARGLDIPAVDWIIQFDPPDDPRDYIHRVGRTARAG 398
Query: 727 KEGEGVLLLAPWEEYFLDDLKD--LPLDKLQLPH---LNPEIQLQ-MDNHMAKIDNNVKE 780
K G+ +L L P E FL LK +PL++ P N + QL+ + N + + K+
Sbjct: 399 KAGKSLLFLLPTELGFLRFLKTAKVPLNEYNFPKEKIANVQTQLEKLINKNYYLHQSAKD 458
Query: 781 AAYHAWLGYYNS-----IREIGRDKTTLVELANKFAQSIGLQRPP 820
Y ++L Y S I ++ R ++L K A++ G PP
Sbjct: 459 -GYRSYLQSYASYSLKKIFDVNR-----LDL-KKVAKAFGFSVPP 496
>gi|116671594|ref|YP_832527.1| DEAD/DEAH box helicase [Arthrobacter sp. FB24]
gi|116611703|gb|ABK04427.1| ATP-dependent RNA helicase CsdA [Arthrobacter sp. FB24]
Length = 747
Score = 206 bits (523), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 137/390 (35%), Positives = 201/390 (51%), Gaps = 28/390 (7%)
Query: 380 RFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIE 439
RF + GI + AL GY + + +Q AT+ LEG+D V A+TGTGK+ AF +PA+
Sbjct: 91 RFADLGIDGRVLAALQDVGYEKPSPIQAATIPLLLEGRDVVGLAQTGTGKTAAFAVPALS 150
Query: 440 AV-----LKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGT 494
+ L S T L+L PTRELA Q+A + K+ D VL + GG+
Sbjct: 151 RLAELHDLNGPSRKT-------QALVLAPTRELALQVAEAFTSYAKHIDDFTVLPVYGGS 203
Query: 495 RFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKD 554
+ L Q++V TPGR++DHI S + L L+ LVLDEAD +L +GF +D
Sbjct: 204 AYGPQLAGLRRG-AQVVVGTPGRVIDHISKGS---LDLSELQYLVLDEADEMLRMGFAED 259
Query: 555 VENIVDCLPRRRQSLLFSATMPKELVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELH 614
VE I P RQ LFSATMP + + + Y++ E VK K + + +
Sbjct: 260 VEQIFQQTPSDRQVALFSATMPSQ-IRRMSKQYLNN----PAEISVKSKTTTGANTRQRY 314
Query: 615 FQIL--HHL-LKEHILGTPDYK-VIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYR 670
Q++ H L IL ++ VI F T M T L L+ + PQ R
Sbjct: 315 LQVMGPHKLDALTRILEVEEFDGVIAFVRTKMATEDLADKLKSRGFQAAAINGDIPQQQR 374
Query: 671 DRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGE 730
+R + + + ILV +DV+ARG+D ++ VV IP D E Y+HR+GRTGR G+ G+
Sbjct: 375 ERTVDALKEGRIDILVATDVAARGLDVERISHVVNYDIPHDTESYVHRIGRTGRAGRSGD 434
Query: 731 GVLLLAPWEEYFLDDLKDL---PLDKLQLP 757
+L + P E+Y L ++ P++++ LP
Sbjct: 435 AILFMTPREKYLLRSIEKATRQPVEQMHLP 464
>gi|406039229|ref|ZP_11046584.1| ATP-dependent RNA helicase [Acinetobacter ursingii DSM 16037 = CIP
107286]
Length = 641
Score = 206 bits (523), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 124/366 (33%), Positives = 199/366 (54%), Gaps = 19/366 (5%)
Query: 392 KALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATS----S 447
+AL G+ T VQE + A +EGKD +V ++TG+GK+ AFLLP + A+ +
Sbjct: 16 QALQDLGFTSPTPVQEQAIPAAIEGKDLLVSSQTGSGKTAAFLLPTLHALAGQDTFVPFK 75
Query: 448 STTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDP 507
+ V +L++ PTRELA Q++ +AIA +++ G+ + ++GG F ++L+
Sbjct: 76 ERMKAVTQPNILVISPTRELAQQVSQDAIAFVRHMKGVRIAAIMGGMPFAKQIQQLKG-- 133
Query: 508 CQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQ 567
Q++VATPGRLLD + + ++L + L++DEAD +LDLGF +D+E I + R+Q
Sbjct: 134 AQVVVATPGRLLDLVNRRQ---IKLDKVDALIVDEADRMLDLGFSEDLEAISELAANRKQ 190
Query: 568 SLLFSATMPKELVLKREHTYIDTVGLGSVETPVKIKQSCLVAPH-----ELHFQILHHLL 622
+L+FSAT ++ E D + + ++ET H E ++L H L
Sbjct: 191 TLMFSATFADRIIRLAECMMQDPMRI-AIETGHSTNTDITQTLHWTDGFEHKKKLLTHWL 249
Query: 623 KEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEFRASKR 682
+ L + +VF ST T +L L E +V ++ PQ R+R R K
Sbjct: 250 SDENLD----QAVVFASTQEDTDMLAEELAEAGHSVVALHGAMPQTVRNRRLRSIREGKA 305
Query: 683 LILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLAPWEEYF 742
ILV +DV+ARG+D P ++ V+ G+P E Y+HR+GRTGR G+ G+ + L E
Sbjct: 306 KILVATDVAARGLDVPTISHVINFGLPMKHEDYVHRIGRTGRAGRTGQAITLATYRERGK 365
Query: 743 LDDLKD 748
+ L+D
Sbjct: 366 IRALED 371
>gi|367006540|ref|XP_003688001.1| hypothetical protein TPHA_0L02160 [Tetrapisispora phaffii CBS 4417]
gi|357526307|emb|CCE65567.1| hypothetical protein TPHA_0L02160 [Tetrapisispora phaffii CBS 4417]
Length = 498
Score = 206 bits (523), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 169/512 (33%), Positives = 265/512 (51%), Gaps = 67/512 (13%)
Query: 336 KSLEDEHDFEEQVELIRKEISKNKLNGNGEKKEKREEEPILSQKRFDECGISPLTIKALT 395
+S ED++ E +V + K++ NGN + + F + +S T+KA+
Sbjct: 4 RSREDDNSLEMEVLNVSSTSGKDE-NGNA------------TVESFADLKLSEPTMKAIE 50
Query: 396 AAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAV--LKATSSSTTQLV 453
G+ MT VQ T+ L G+D + AKTG+GK++AFLLPAIE + LK + T
Sbjct: 51 KMGFENMTPVQARTIPPLLAGRDVLGAAKTGSGKTLAFLLPAIEMLHSLKYKPRNGTG-- 108
Query: 454 PPIYVLILCPTRELASQIAAEAIALLKNHD-GIGVLTLVGGTRFKVDQRRLESDP----C 508
V+++ PTRELA QI A L++ H G++ +GG RR E+D
Sbjct: 109 ----VIVITPTRELALQIFGVARELMEFHSQTFGIV--IGGA-----NRRQEADKLVKGV 157
Query: 509 QILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRR-RQ 567
+L+ATPGRLLDH++N G + LK L++DEAD +L++GF +++ I+ LP+ RQ
Sbjct: 158 NMLIATPGRLLDHLQNTKGFVYK--NLKALIIDEADRILEIGFEDEMKQIIRILPKEDRQ 215
Query: 568 SLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILHHL 621
S+LFSAT + + L++ +I+ V T ++Q +V + F +L
Sbjct: 216 SMLFSATQTTKVEDLARMSLRKGPLFINVVTDKDTSTADGLEQGYVVCESDKRFLLLFSF 275
Query: 622 LKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEFRASK 681
LK + K+IVF S+ LL + + V E++ ++ Q R EF ++
Sbjct: 276 LKRN----QKKKIIVFLSSCNSVKYYAELLNYIDLPVLELHGKQKQQKRTNTFFEFCNAE 331
Query: 682 RLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGK-EGEGVLLLAPWEE 740
R ILV +DV+ARG+D P V +VQ P D YIHR+GRT R K +G+ ++ L P E
Sbjct: 332 RGILVCTDVAARGLDIPAVDWIVQFDPPDDPRDYIHRVGRTARGTKGKGKSLMFLTPHEL 391
Query: 741 YFLDDLK--DLPLDKLQLPH---LNPEIQLQ----MDNHMAKIDNNVKEAAYHAWLGYY- 790
FL LK +PL++ + P N + QL+ + H+ +I + Y ++L Y
Sbjct: 392 GFLRYLKAAKVPLNEYEFPTNKIANVQSQLEKLIKSNYHLHQIAKD----GYRSYLQAYA 447
Query: 791 -NSIREIGR-DKTTLVELANKFAQSIGLQRPP 820
+S++ + + DK L K A+S G PP
Sbjct: 448 SHSLKTVYQIDKLDL----TKVAKSYGFPIPP 475
>gi|156377720|ref|XP_001630794.1| predicted protein [Nematostella vectensis]
gi|156217822|gb|EDO38731.1| predicted protein [Nematostella vectensis]
Length = 495
Score = 206 bits (523), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 157/456 (34%), Positives = 244/456 (53%), Gaps = 39/456 (8%)
Query: 386 ISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLK-- 443
+S T++ + G+ MT +Q +++ L+G+D + AKTG+GK++AFL+P +E + K
Sbjct: 8 VSEKTLQGIKDMGFTTMTEIQHKSIAPLLKGRDLLGAAKTGSGKTLAFLVPVVELLYKLQ 67
Query: 444 -ATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHD-GIGVLTLVGGTRFKVDQR 501
T + T V+I+ PTREL+ Q A LLK+H+ G++ +GG K +
Sbjct: 68 FKTRNGTG-------VIIISPTRELSLQTYGVARDLLKHHNFTYGII--MGGVNRKAEAE 118
Query: 502 RLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDC 561
RL+ +L+ATPGRLLDH++N G + L+ LV+DEAD +L++GF +++ I+
Sbjct: 119 RLQKG-VNLLIATPGRLLDHLQNTQGFLYK--NLQCLVIDEADRILEIGFEEEMRQIIRI 175
Query: 562 LPRRRQSLLFSATMPK------ELVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHF 615
LP +RQ++LFSAT K +L LKR Y+ T ++Q +V P E F
Sbjct: 176 LPSKRQTVLFSATQTKNVEDLAKLSLKRSPLYVGVDDHKETSTVEGLEQGYIVVPSEKRF 235
Query: 616 QILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISE 675
+L LK++ KV+VF S+ LL + + V E++ ++ Q R
Sbjct: 236 LVLFTFLKKN----RSKKVMVFFSSCNSVKYHSELLNYIDLPVLEIHGKQKQQKRTTTFF 291
Query: 676 EFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEG--VL 733
EF +K IL+ +DV+ARG+D P+V +VQ D ++YIHR+GRT R G EG+G +L
Sbjct: 292 EFCNAKSGILLCTDVAARGLDIPEVDWIVQYDPADDPKEYIHRVGRTAR-GTEGKGHALL 350
Query: 734 LLAPWEEYFLDDLKD--LPLDKLQLPH---LNPEIQLQMDNHMAKIDNNVKEA--AYHAW 786
L P E FL LK +PL++ LN IQ Q++ + K K A AY A+
Sbjct: 351 FLLPEELAFLRYLKHAKVPLNEYDFSSSKILN--IQSQLERLIEKNYYLHKSAKDAYKAY 408
Query: 787 LGYYNSIREIGRDKTTLVELANKFAQSIGLQRPPPL 822
+ Y S + ++L + A S G PP +
Sbjct: 409 IQAYASHQHKSIFNVNSLDL-QRVALSFGFAVPPSV 443
>gi|379718419|ref|YP_005310550.1| DEAD/DEAH box helicase [Paenibacillus mucilaginosus 3016]
gi|378567091|gb|AFC27401.1| DEAD/DEAH box helicase domain-containing protein [Paenibacillus
mucilaginosus 3016]
Length = 578
Score = 206 bits (523), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 136/376 (36%), Positives = 201/376 (53%), Gaps = 22/376 (5%)
Query: 376 LSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLL 435
+ + F GIS +AL GY + T +Q + + L G D + +A+TGTGK++AF+L
Sbjct: 1 MKKNEFQALGISQELAEALHKHGYNEPTPIQREAIPSVLGGHDVIAQAQTGTGKTLAFVL 60
Query: 436 PAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTR 495
P +E++ S + LI+ PTRELA QI E +A GI VL+ GG
Sbjct: 61 PILESIDPNRSH--------VQALIVTPTRELAIQITEE-VARWAPLKGIRVLSAYGGQD 111
Query: 496 FKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDV 555
+ R+LE I+VATPGRLLDH+ ++ V+L L LVLDEAD +L +GF +V
Sbjct: 112 VERQIRKLEG-AIHIIVATPGRLLDHLRRET---VQLFKLSTLVLDEADQMLHMGFLPEV 167
Query: 556 ENIVDCLPRRRQSLLFSATMPKELVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHF 615
I+ P RRQ+LLFSATMP E V + Y+ VE VK K+ L ++
Sbjct: 168 VEIISATPTRRQTLLFSATMP-ERVRQLAKEYMKP----PVEIEVKAKRVTLDEIEQIVV 222
Query: 616 QILHH----LLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRD 671
Q L + + P + ++FC T + + L L E V E++ Q R+
Sbjct: 223 QTTDRGKLDALCKAMEEDPPFLGMIFCRTKLRATKLRDELDERGYAVDELHGDLTQAKRE 282
Query: 672 RISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEG 731
++ + FR +K LV +D++ARG+D +T V IP D E YIHR+GRTGR G G+
Sbjct: 283 QVMKRFRDAKIQFLVATDIAARGLDVEGITHVYNYDIPHDAESYIHRIGRTGRAGMTGKA 342
Query: 732 VLLLAPWEEYFLDDLK 747
+ AP + ++L+ ++
Sbjct: 343 ITFTAPRDAFYLEAIE 358
>gi|171463843|ref|YP_001797956.1| DEAD/DEAH box helicase [Polynucleobacter necessarius subsp.
necessarius STIR1]
gi|171193381|gb|ACB44342.1| DEAD/DEAH box helicase domain protein [Polynucleobacter necessarius
subsp. necessarius STIR1]
Length = 482
Score = 206 bits (523), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 139/379 (36%), Positives = 203/379 (53%), Gaps = 21/379 (5%)
Query: 366 KKEKREE-EPILSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAK 424
K+ KRE + S F ++ +K + G+ Q T VQ + A L G D +V ++
Sbjct: 5 KENKRESYDSKSSGNEFQNFALAASLLKNVAELGFTQATAVQAQVIPAALAGSDLLVNSQ 64
Query: 425 TGTGKSIAFLLPAIEAVLK--ATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNH 482
TG+GK+ AFLLP I +++ +S P VL+LCPTRELA Q+AA+A+ L++
Sbjct: 65 TGSGKTAAFLLPLINQLIEDNPNNSPVPSRAQP-KVLVLCPTRELAQQVAADAVNLVRGM 123
Query: 483 DGIGVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDE 542
GI + T++GG + + L+ ++VATPGRLLD ++K+ +RL +K LV+DE
Sbjct: 124 KGIRIATVMGGMPYGKQIQALKG--ALLVVATPGRLLDLCDSKA---IRLDDVKQLVIDE 178
Query: 543 ADHLLDLGFRKDVENIVDCLPRRRQSLLFSATM-PKELVLKREHTY----IDTVGLGSVE 597
AD +LD+GF D+E I R Q+L+FSAT PK + L E T I+ G E
Sbjct: 179 ADRMLDMGFADDLEAIDKRCAGRNQTLMFSATFAPKIMSLANELTTNAKRIELAHAG--E 236
Query: 598 TPVKIKQSCLVAPHELHFQILHHLLKEHILGTPDY-KVIVFCSTGMVTSLLYLLLREMKM 656
I+Q A H H L EHIL D + +VF ST + + + LR
Sbjct: 237 KHANIEQKLHWADSMSH----KHKLLEHILADADLDQAVVFASTQVESEKIADTLRANGY 292
Query: 657 NVREMYSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYI 716
++ PQ R R E R + ILV +DV+ARG+D P ++ V+ G+P E Y
Sbjct: 293 EATALHGAMPQAVRMRRLESLRKGRTKILVATDVAARGIDVPRISHVINFGLPMKPEDYT 352
Query: 717 HRLGRTGREGKEGEGVLLL 735
HR+GRTGR G+ G + L+
Sbjct: 353 HRIGRTGRAGRNGVAITLV 371
>gi|375308018|ref|ZP_09773305.1| dead/deah box helicase domain-containing protein [Paenibacillus sp.
Aloe-11]
gi|375080349|gb|EHS58570.1| dead/deah box helicase domain-containing protein [Paenibacillus sp.
Aloe-11]
Length = 526
Score = 206 bits (523), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 132/363 (36%), Positives = 196/363 (53%), Gaps = 22/363 (6%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F E + P I+A+T G+ + T +Q ++ L+GKD + +A+TGTGK+ AF +P I
Sbjct: 4 FAEFDLEPKVIQAITELGFEEATPIQAKSIPIALQGKDMIGQAQTGTGKTAAFGIPLISK 63
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+ + I LI+ PTRELA Q+A E I L G+ L + GG
Sbjct: 64 IARNDEK--------IRALIMAPTRELAIQVAEE-IEKLSRFKGLRTLPIYGGQDIVRQI 114
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
R L+ P QI++ TPGRLLDHI K+ ++L + +VLDEAD +LD+GF +D+++I+
Sbjct: 115 RALKKKP-QIIIGTPGRLLDHINRKT---IKLEDVNTVVLDEADEMLDMGFMEDIQSILK 170
Query: 561 CLPRRRQSLLFSATMPKELVLKREHTYID----TVGLGSVETPVKIKQSCLVAPHELHFQ 616
+P RQ++LFSATMP + E D +V V P+ I+Q+ + P F+
Sbjct: 171 QVPDERQTMLFSATMPPNIKRLAEQFLKDPEHVSVIPKQVSAPL-IEQAYIEVPERQKFE 229
Query: 617 ILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEE 676
L L+ + +P+ IVF T L L++ + ++ Q RD + +
Sbjct: 230 ALSRLID---MESPEL-AIVFGRTKRRVDELAEALQKRGYSADGLHGDLSQNQRDAVMRK 285
Query: 677 FRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLA 736
FR +LV +DV+ARG+D VT VV +P D E Y+HR+GRTGR GKEGE +
Sbjct: 286 FRDGSIDVLVATDVAARGLDVSGVTHVVNFDLPQDPESYVHRIGRTGRAGKEGEAWSFVT 345
Query: 737 PWE 739
P E
Sbjct: 346 PRE 348
>gi|326693280|ref|ZP_08230285.1| ATP-dependent RNA helicase/autoaggregation-mediating protein
[Leuconostoc argentinum KCTC 3773]
Length = 518
Score = 206 bits (523), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 152/411 (36%), Positives = 213/411 (51%), Gaps = 34/411 (8%)
Query: 380 RFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIE 439
+F E G+S + A+T GY++ T +QE T+ L GKD + +A+TGTGK+ AF LP +E
Sbjct: 2 KFSELGLSQDILDAITTHGYVEATPIQEKTIPLTLAGKDVIGQAQTGTGKTAAFGLPILE 61
Query: 440 AVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHD-GIGVLTLVGGTRFKV 498
+ + I LI+ PTRELA Q A E L HD + V + GG +
Sbjct: 62 NIDLDNKN--------IQALIVSPTRELAIQTADELKKL--GHDKHVDVQVVFGGADIRR 111
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
+ L+S P QILV TPGRLLDHI K+ V++ +K LVLDEAD +L++GF D+E I
Sbjct: 112 QIQNLKSHP-QILVGTPGRLLDHINRKT---VKIDQVKTLVLDEADEMLNMGFLDDIEAI 167
Query: 559 VDCLPRRRQSLLFSATMPKEL-------VLKREHTYIDTVGLGSVETPVKIKQSCLVAPH 611
+ P RQ+LLFSATMP + + EH I+ L T + Q + A
Sbjct: 168 IKNTPADRQTLLFSATMPPAIKRIGVKFMTNPEHIQIEAKEL----TTDLVDQYFVRARD 223
Query: 612 ELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRD 671
F + +L + P IVF T L L + ++ Q R
Sbjct: 224 NEKFDTMTRILD---VQAPTL-AIVFGRTKRRVEELARGLEARGYHAAGLHGDLTQQMRS 279
Query: 672 RISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEG 731
R+ +F++ + ILV +DV+ARG+D DV+ V IP D E Y+HR+GRTGR G EG
Sbjct: 280 RVLSQFKSHEINILVATDVAARGLDVKDVSHVYNFDIPQDPESYVHRIGRTGRAGAEGVS 339
Query: 732 VLLLAPWEEYFLDDLKDLPLDKLQLPHLNPEIQLQMDNHMAKIDNNVKEAA 782
V +AP E +L ++DL K ++ L P LQ + + KI N E A
Sbjct: 340 VTFVAPNEMDYLRAIEDLT--KKRMTPLEPAT-LQ-EARIGKIKNAAGEVA 386
>gi|239831816|ref|ZP_04680145.1| ATP-dependent RNA helicase dbp2 [Ochrobactrum intermedium LMG 3301]
gi|239824083|gb|EEQ95651.1| ATP-dependent RNA helicase dbp2 [Ochrobactrum intermedium LMG 3301]
Length = 484
Score = 206 bits (523), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 134/380 (35%), Positives = 202/380 (53%), Gaps = 17/380 (4%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F E G+SP + A+ AAGY T +Q + LE KD + A+TGTGK+ +F+LP +
Sbjct: 4 FAELGLSPKVLAAVEAAGYTAPTPIQAGAIPPALERKDVLGIAQTGTGKTASFVLPMLTL 63
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+ K + + LIL PTRELA+Q+ E A + + V L+GG F +
Sbjct: 64 LEKGRARARMP-----RTLILEPTRELAAQVE-ENFAKYGINQRLNVALLIGGVSFDDQE 117
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
R+LE +L+ATPGRLLDH E L L G+++LV+DEAD +LD+GF D+E I
Sbjct: 118 RKLERG-ADVLIATPGRLLDHFERGKLL---LTGVEILVIDEADRMLDMGFIPDIERICK 173
Query: 561 CLPRRRQSLLFSATMPKELV-LKREHTYIDT-VGLGSVETPVKIKQSCLVAPHELHFQ-- 616
+P RQ+L FSATMP E+ L + + T V + + K LV + +
Sbjct: 174 LIPFTRQTLFFSATMPPEITKLTEQFLHSPTRVEVAKASSTAKTVTQRLVKSTKKDWDKR 233
Query: 617 -ILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISE 675
+L L++ G I+FC+ S L+ L + N ++ Q R +
Sbjct: 234 AVLRDLIRAE--GDTLKNAIIFCNRKKDVSELFRSLTRHEFNAGALHGDMDQRARMTMLS 291
Query: 676 EFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLL 735
F+ K +LV SDV+ARG+D PDV+ V IP E Y+HR+GRTGR G+ G+ ++
Sbjct: 292 NFKDGKLQLLVASDVAARGLDIPDVSHVFNFDIPIHSEDYVHRIGRTGRAGRSGKAFTIV 351
Query: 736 APWEEYFLDDLKDLPLDKLQ 755
P + +L ++D+ +K++
Sbjct: 352 TPSDTKYLAAIEDMIGEKIE 371
>gi|72382486|ref|YP_291841.1| helicase, C-terminal:DEAD/DEAH box helicase, N-terminal
[Prochlorococcus marinus str. NATL2A]
gi|72002336|gb|AAZ58138.1| ATP-dependent RNA helicase CsdA [Prochlorococcus marinus str.
NATL2A]
Length = 589
Score = 206 bits (523), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 134/388 (34%), Positives = 203/388 (52%), Gaps = 24/388 (6%)
Query: 377 SQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLP 436
S+ F E S I+ ++ GY T +Q+A + L G+D V +A+TGTGK+ AF LP
Sbjct: 34 SENGFSEFNFSEELIQTISDKGYSSPTPIQKAAIPELLLGRDLVGQAQTGTGKTAAFALP 93
Query: 437 AIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRF 496
+E + K VL+L PTRELA Q+A H VL + GG+ F
Sbjct: 94 ILERLKKNVGHPQ--------VLVLAPTRELAMQVAESFRTYSAGHPHFKVLAIYGGSDF 145
Query: 497 KVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVE 556
+ +Q ++V TPGR++DH+ K+ + L LVLDEAD +L +GF DVE
Sbjct: 146 R-NQINTLRRGVDVVVGTPGRVMDHMRQKT---LNTSHLSCLVLDEADEMLRMGFIDDVE 201
Query: 557 NIVDCLPRRRQSLLFSATMPKELVLKREHTYIDTVGLGSVE-TPVK---IKQSCLVAPHE 612
I++ LP RQ +LFSATMP E + + Y+++ +++ T +K I+Q + +
Sbjct: 202 WILEQLPEERQLVLFSATMPSE-IRRLSKKYLNSPAEITIKATELKERLIRQRYISVQNV 260
Query: 613 LHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDR 672
L +L+ + VI+F T +T ++ L NV + PQ R+R
Sbjct: 261 YKVNALQRVLE----AVSEEGVIIFARTKAITIVVAEKLESYGYNVAVLNGDIPQNQRER 316
Query: 673 ISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGV 732
E R ILV +DV+ARG+D + V+ +P DRE Y+HR+GRTGR G+ GE +
Sbjct: 317 TVERLRQGSINILVATDVAARGLDVDRIGLVINYDMPFDREAYVHRIGRTGRAGRNGEAI 376
Query: 733 LLLAPWEEYFLDDLKDL---PLDKLQLP 757
L + P E FL +L+ P++K+ +P
Sbjct: 377 LFVNPRERSFLSNLERAVGQPIEKMDIP 404
>gi|410968542|ref|XP_003990761.1| PREDICTED: ATP-dependent RNA helicase DDX18 [Felis catus]
Length = 674
Score = 206 bits (523), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 150/454 (33%), Positives = 246/454 (54%), Gaps = 39/454 (8%)
Query: 386 ISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKAT 445
+S T++A+ G+ MT +Q ++ LEG+D + AKTG+GK++AFL+PA+E ++K
Sbjct: 190 VSENTLRAIKEMGFTNMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPAVELIVK-- 247
Query: 446 SSSTTQLVP--PIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRL 503
+ +P VLIL PTRELA Q L+ +H L ++GG+ + ++L
Sbjct: 248 ----LKFMPRNGTGVLILSPTRELAMQTFGVLKELMTHHVHTYGL-IMGGSNRSAEAQKL 302
Query: 504 ESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLP 563
+ I+VATPGRLLDH++ + + L+ LV+DEAD +LD+GF ++++ I+ LP
Sbjct: 303 -GNGINIIVATPGRLLDHMQVRQHFMYK--NLQCLVIDEADRILDVGFEEELKQIIKLLP 359
Query: 564 RRRQSLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQI 617
RRQ++LFSAT ++ + LK+E Y+ + T ++Q +V P E F +
Sbjct: 360 TRRQTMLFSATQTRKVEDLARISLKKEPLYVGVDDDKANATVDGLEQGYVVCPSEKRFLL 419
Query: 618 LHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEF 677
L LK++ K++VF S+ M Y LL + + V ++ R+ Q R +F
Sbjct: 420 LFTFLKKN----RKKKLMVFFSSCMSVKYHYELLNYIDLPVLAIHGRQKQNKRTTTFFQF 475
Query: 678 RASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGRE-GKEGEGVLLLA 736
+ IL+ +DV+ARG+D P+V +VQ P D ++YIHR+GRT R G+ +L+L
Sbjct: 476 CNADSGILLCTDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTARGLNGRGQALLILR 535
Query: 737 PWEEYFLDDLKD--LPLDKLQLPHLN-PEIQLQMDNHMAKIDNNVKEAAYHAWLGYYNSI 793
P E FL L+ +PL + + +IQ Q++ + K + + ++A A+ Y I
Sbjct: 536 PEELGFLRYLRQSKVPLSEFEFSWSKISDIQSQLEKLIEK-NYFLHKSAQEAYKSY---I 591
Query: 794 REIGRDKTTLVELAN-------KFAQSIGLQRPP 820
R D +L ++ N + A S G + PP
Sbjct: 592 R--AYDSHSLKQIFNVNNLNLPQVALSFGFKVPP 623
>gi|326503202|dbj|BAJ99226.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 591
Score = 206 bits (523), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 148/438 (33%), Positives = 230/438 (52%), Gaps = 34/438 (7%)
Query: 375 ILSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFL 434
IL+ F E IS LT KA+ Y + ++Q ++ LEG+D + AKTG+GK++AFL
Sbjct: 93 ILTSMLFSELPISELTAKAIREMNYTHLAQIQARSIPHLLEGRDVMGAAKTGSGKTLAFL 152
Query: 435 LPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHD-GIGVLTLVGG 493
+PAIE + S V+++CPTRELA Q A L+K H +G + G
Sbjct: 153 IPAIELLYNLHFSPRNG----TGVIVVCPTRELAIQTHNVAKELMKYHSQTLGYVIGGNG 208
Query: 494 TRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRK 553
R + DQ + +LVATPGRLLDH++N G + LK L++DEAD +L+ F +
Sbjct: 209 RRTEADQL---AKGVNLLVATPGRLLDHLQNTKGFIYKR--LKCLIIDEADRILEQNFEE 263
Query: 554 DVENIVDCLPRRRQSLLFSATMPKEL------------VLKREHTYIDTVGLGSVETPVK 601
D++ I LP+ RQ++LFSAT KE+ K + YI S T
Sbjct: 264 DMKQIFKRLPQNRQTVLFSATQTKEVEDFAKLSFEKNEERKEKPVYISVDDGKSNATVEG 323
Query: 602 IKQSCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREM 661
++Q V P + F +L+ LK+ KV+VF S+ LL +++ ++
Sbjct: 324 LQQGYCVIPSDKRFLVLYAFLKK----KQSKKVMVFFSSCSSVKFHAELLNFLQIECEDI 379
Query: 662 YSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGR 721
+ ++ Q R F + + IL+ ++V+ARG+D PDV +VQ P + + YIHR+GR
Sbjct: 380 HGKQKQQKRTTTFFNFCKADKGILLCTNVAARGLDIPDVDYIVQYDPPDEPKDYIHRVGR 439
Query: 722 TGR-EGKEGEGVLLLAPWEEYFLDDLK--DLPLDKLQLPHLN-PEIQLQMDNHMAK---I 774
T R E +G +L L P E FL LK + L + + + N P +Q ++N + + +
Sbjct: 440 TARGEKGKGSALLFLLPQELKFLIYLKAAKISLTEYEFNNKNVPNLQSHLENIVGENYFL 499
Query: 775 DNNVKEAAYHAWLGYYNS 792
+ + KE AY +++ YNS
Sbjct: 500 NQSAKE-AYRSYILAYNS 516
>gi|366054164|ref|ZP_09451886.1| ATP-dependent RNA helicase DeaD [Lactobacillus suebicus KCTC 3549]
Length = 506
Score = 206 bits (523), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 140/382 (36%), Positives = 198/382 (51%), Gaps = 38/382 (9%)
Query: 380 RFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIE 439
+F E G+S +KA+ +GY + T +QE T+ L+G+D + +A+TGTGK+ AF LP IE
Sbjct: 2 KFSELGLSDSLLKAIKRSGYEEATPIQEQTIPMVLDGQDVIGQAQTGTGKTAAFGLPIIE 61
Query: 440 AVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVD 499
+ P I LI+ PTRELA Q E L K+ V + GG +
Sbjct: 62 HIDTEN--------PDIQALIISPTRELAIQTQEELYRLGKDKHA-KVQVVYGGADIRRQ 112
Query: 500 QRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIV 559
L++ P QILV TPGRLLDHI ++ V+L LK LVLDEAD +L++GF +D+E+I+
Sbjct: 113 INNLKNHP-QILVGTPGRLLDHINRRT---VKLANLKTLVLDEADEMLNMGFLEDIESII 168
Query: 560 DCLPRRRQSLLFSATMPKELVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHEL------ 613
P +RQ+LLFSATMP E I +G+ + P ++K EL
Sbjct: 169 KQTPEKRQTLLFSATMPPE---------IKKIGVQFMTDPKQVKIKAKELTTELIDQYYV 219
Query: 614 ------HFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQ 667
F I+ ++ + PD IVF T L L N ++ Q
Sbjct: 220 RSRDFEKFDIMTRMID---VQDPDL-TIVFGRTKRRVDELSKGLIARGYNAAGIHGDLTQ 275
Query: 668 LYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGK 727
R +I F+A K ILV +DV+ARG+D VT V IP D + Y+HR+GRTGR G
Sbjct: 276 QRRTQIMNRFKAGKIDILVATDVAARGLDISGVTHVYNYDIPQDPDSYVHRIGRTGRAGH 335
Query: 728 EGEGVLLLAPWEEYFLDDLKDL 749
G + + P E +L +++ L
Sbjct: 336 HGVSLTFVTPNEMDYLREIEKL 357
>gi|255576631|ref|XP_002529205.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
gi|223531323|gb|EEF33161.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
Length = 590
Score = 206 bits (523), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 152/456 (33%), Positives = 242/456 (53%), Gaps = 36/456 (7%)
Query: 354 EISKNKLNGNGEKKEKREEEPILSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSAC 413
E+SKN+ +G+K KR I+S F+ G+S T KA+ G+ +T++Q +
Sbjct: 81 EVSKNE-GQDGDKVRKRGS-GIMSTDSFESLGLSEPTRKAIQEMGFQYLTQIQARAIPPL 138
Query: 414 LEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLVP--PIYVLILCPTRELASQI 471
L GKD + A+TG+GK++AFL+PA+E + P V+++CPTRELA Q
Sbjct: 139 LVGKDVLGAARTGSGKTLAFLIPAVELLY------NVHFAPRNGTGVVVICPTRELAIQT 192
Query: 472 AAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVR 531
A A LLK H L ++GG+ K + R+ +LVATPGRLLDH++N G +
Sbjct: 193 HAVAKDLLKYHSQTLGL-VIGGSARKGEAERIVKG-VNLLVATPGRLLDHLQNTKGFIYK 250
Query: 532 LMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQSLLFSATMPKE------LVLKREH 585
LK L++DEAD +L+ F ++++ I+ LP+ RQ+ LFSAT K+ L +
Sbjct: 251 --NLKCLMIDEADRILEANFEEEMKQIIKILPKSRQTALFSATQTKKVEDLARLSFQITP 308
Query: 586 TYIDTVGLGSVETPVKIKQSCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTS 645
YID + T ++Q V F +L+ LK ++ KV+VF S+
Sbjct: 309 VYIDVDDGRTKVTNEGLQQGYCVVHSAKRFILLYSFLKRNL----SKKVMVFFSSCNSVK 364
Query: 646 LLYLLLREMKMNVREMYSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQ 705
LLR +++ +++ ++ Q R +F +++ IL+ +DV+ARG+D P V +VQ
Sbjct: 365 FHSELLRYIQVECFDIHGKQKQQKRTTTFFDFCKAEKGILLCTDVAARGLDIPAVDWIVQ 424
Query: 706 VGIPPDREQYIHRLGRTGR-EGKEGEGVLLLAPWEEYFLDDL-------KDLPLDKLQLP 757
P + ++YIHR+GRT R EG +G +L L P E FL L K+ D +L
Sbjct: 425 YDPPDEPKEYIHRVGRTARGEGGKGNALLFLIPEELQFLRYLKAAKVPVKEYEFDVKKLA 484
Query: 758 HLNPEIQ-LQMDNHMAKIDNNVKEAAYHAWLGYYNS 792
++ ++ L +N+ N + AY +++ YNS
Sbjct: 485 NVQSHLEKLVANNYYL---NKSAKDAYRSYILAYNS 517
>gi|407044034|gb|EKE42324.1| DEAD/DEAH box helicase, putative, partial [Entamoeba nuttalli P19]
Length = 505
Score = 205 bits (522), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 153/482 (31%), Positives = 258/482 (53%), Gaps = 27/482 (5%)
Query: 352 RKEISKNKLNGNGEKKEKRE--EEPILSQKRFDECGISPLTIKALTAAGYIQMTRVQEAT 409
++EI++NK E +EK + L+ + +S KAL AGY +MT +Q +
Sbjct: 15 KEEINQNKTKSKEENEEKTKGTTSSFLTDIEYKSLNLSEEIQKALEEAGYTKMTTIQARS 74
Query: 410 LSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELAS 469
+ L GKD + KA+TG+GK++AFL+P +E +L T I I+ PTRELA
Sbjct: 75 IPLLLMGKDIMAKARTGSGKTLAFLIPIVE-ILNKIHFQTRNGTGAI---IISPTRELAI 130
Query: 470 QIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLS 529
Q +L + + L ++GG+ K ++ L+ I+VATPGRLLDHI N
Sbjct: 131 QTFDVLEKILAHSERTRTL-IIGGSSKKKEEEALKKG-ASIVVATPGRLLDHIINTKCFI 188
Query: 530 VRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQSLLFSATMPKEL-----VLKRE 584
R LK LV+DEAD ++++GF +++ I++ LP+ RQ++LFSAT +++ + ++
Sbjct: 189 YR--NLKCLVIDEADRIMEVGFEEEMRQILNRLPKNRQTMLFSATQSEKVDDIANISLKQ 246
Query: 585 HTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVT 644
I+ ++ T K++Q ++ + F++L+ L+++ + K IVF S+
Sbjct: 247 PVVINVESQSTISTSSKLEQGYVLIEAKDRFRLLYTFLRKN----KNKKTIVFMSSCKAV 302
Query: 645 SLLYLLLREMKMNVREMYSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVV 704
LL + + V+ ++ + Q R ++ EF +K IL+T+D++ARG+D P V ++
Sbjct: 303 KFYSDLLNYIDIPVKALHGQLDQDKRTKVFFEFCKAKEAILITTDIAARGLDIPAVDWII 362
Query: 705 QVGIPPDREQYIHRLGRTGREGKEGEGVLLLAPWEEYFLDDLK--DLPLDKLQLPHLN-P 761
QV +P + YIHR+GRT R +G +L + P E L+ LK +PL + ++P
Sbjct: 363 QVDLPDSPKDYIHRVGRTARADTKGRALLFVQPCEIRILEYLKGEKIPLTQYEVPEKKIA 422
Query: 762 EIQLQMDNHMAK--IDNNVKEAAYHAWLGYYNSIREIGRDKTTLVEL-ANKFAQSIGLQR 818
IQ +++ + K N + Y A++ YNS R + +D + +L A S GL
Sbjct: 423 NIQRELEKLVEKNYYLNTEAKDGYKAYIMAYNS-RSL-KDVFNVNDLDIGGLALSFGLTN 480
Query: 819 PP 820
PP
Sbjct: 481 PP 482
>gi|68468064|ref|XP_721871.1| hypothetical protein CaO19.3962 [Candida albicans SC5314]
gi|74656630|sp|Q5AK59.1|HAS1_CANAL RecName: Full=ATP-dependent RNA helicase HAS1
gi|46443813|gb|EAL03092.1| hypothetical protein CaO19.3962 [Candida albicans SC5314]
Length = 565
Score = 205 bits (522), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 151/429 (35%), Positives = 229/429 (53%), Gaps = 34/429 (7%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F+ S T+KA+ G+ +MT+VQ T+ L G+D + AKTG+GK++AFL+PAIE
Sbjct: 110 FENADFSEPTMKAIKEMGFTKMTKVQAKTIPPLLAGRDVLGAAKTGSGKTLAFLIPAIEL 169
Query: 441 V--LKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHD-GIGVLTLVGGTRFK 497
+ LK + T V+I+ PTRELA QI A L++ H G++ +GG +
Sbjct: 170 LYSLKIKPRNGTA------VIIITPTRELALQIFGVARELMQFHSQTCGIV--IGGADRR 221
Query: 498 VDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVEN 557
+ +L + +LVATPGRLLDH++N + LK LV+DEAD +L++GF +++
Sbjct: 222 QEATKL-AKGVNLLVATPGRLLDHLKNTQFV---FSNLKALVIDEADRILEIGFEDEMKQ 277
Query: 558 IVDCLPRR-RQSLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSCLVAP 610
I+ LP RQS+LFSAT + + L+ YI+ V V T ++Q +V
Sbjct: 278 IIKVLPNENRQSMLFSATQTTKVEDLARISLRPGPLYINVVPEKDVSTADGLEQGYVVCD 337
Query: 611 HELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYR 670
+ F +L LK ++ K+IVF S+ LL + + V +++ ++ Q R
Sbjct: 338 SDKRFLLLFSFLKRNV----KKKIIVFLSSCNSVKFYSELLNYIDLPVLDLHGKQKQQKR 393
Query: 671 DRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGE 730
EF +K+ ILV +DV+ARG+D P V +VQ P D YIHR+GRT R G +G+
Sbjct: 394 TNTFFEFCNAKQGILVCTDVAARGLDIPAVDWIVQFDPPDDPRDYIHRVGRTAR-GTQGK 452
Query: 731 G--VLLLAPWEEYFLDDLK--DLPLDKLQLPH---LNPEIQLQMDNHMAKIDNNVKEAAY 783
G ++ L P E FL LK +PL++ + P N + QL + N + Y
Sbjct: 453 GKSLMFLTPSELGFLRYLKAAKVPLNEYEFPANKIANIQSQLTKLIKTNYLLNQSAKDGY 512
Query: 784 HAWLGYYNS 792
A+L Y S
Sbjct: 513 RAYLQAYAS 521
>gi|150951242|ref|XP_001387532.2| ATP-dependent RNA helicase DBP4 (Helicase CA4) (Helicase UF1)
[Scheffersomyces stipitis CBS 6054]
gi|284018077|sp|A3GGE9.2|DBP4_PICST RecName: Full=ATP-dependent RNA helicase DBP4
gi|149388432|gb|EAZ63509.2| ATP-dependent RNA helicase DBP4 (Helicase CA4) (Helicase UF1)
[Scheffersomyces stipitis CBS 6054]
Length = 765
Score = 205 bits (522), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 141/460 (30%), Positives = 244/460 (53%), Gaps = 34/460 (7%)
Query: 380 RFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIE 439
+F + I+ T++ L + ++ +T +Q+ T+ L+G+D + A+TG+GK++AFL+P +E
Sbjct: 48 QFSDLPITQETLRGLNESSFMSLTDIQKKTIPIALKGEDLMGTARTGSGKTLAFLIPVVE 107
Query: 440 AVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVD 499
++++ + L LI+ PTRELA Q E + + ++ + GG + +
Sbjct: 108 SLIRNKITEHDGLA----ALIVSPTRELAVQ-TFEVLTKIGKYNTFSAGLVTGGKDVQYE 162
Query: 500 QRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIV 559
+ R+ ILV TPGR+ H+ G+ L++LVLDEAD LD+GF+K ++NIV
Sbjct: 163 KERVSR--MNILVGTPGRISQHLNEAVGMETS--NLQVLVLDEADRCLDMGFKKQIDNIV 218
Query: 560 DCLPRRRQSLLFSATMPKEL--VLKREHTYIDTVGLGSVE----TPVKIKQSCLVAPHEL 613
LP RQ+LLFSAT+ + + + T +G+ S + TP + Q + P +
Sbjct: 219 GHLPPTRQTLLFSATVSDSVKDLARLSLTNPKRIGVSSDQDVSATPESLDQYYIRIPLDE 278
Query: 614 HFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK--MNVREMYSRKPQLYRD 671
+L +K H+ K++VF S+ Y R ++ +++ ++Y R Q R
Sbjct: 279 KLDVLWSFIKSHLKS----KILVFFSSSKQVQYAYETFRTLQPGISLLKLYGRHKQTSRL 334
Query: 672 RISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEG 731
+ +F ++ L +D+ ARG+D+P + VVQV P D Y+HR+GR R G++G+
Sbjct: 335 ETTVKFTQAQYACLFATDIVARGLDFPAIDWVVQVDCPEDAVTYVHRVGRAARFGRQGKS 394
Query: 732 VLLLAPWEEYFLDDLKDLPLDKLQLPHLN------PEIQLQMDNHMAKIDNNVKEAAYHA 785
+L+L P EE + LK L +K++ +N I+ Q+ + K D +K A
Sbjct: 395 LLMLLPSEEEGM--LKRLENNKIEPKFMNIKQKSKKSIRPQLQSLCFK-DPMIKNLGQRA 451
Query: 786 WLGYYNSIREIGRDKTT--LVEL-ANKFAQSIGLQRPPPL 822
++ YY S+ I +DK + EL + K+A S+GL P +
Sbjct: 452 FISYYKSVY-IQKDKDVFKVEELPSEKYAASLGLPGAPKI 490
>gi|149236686|ref|XP_001524220.1| hypothetical protein LELG_04190 [Lodderomyces elongisporus NRRL
YB-4239]
gi|152013482|sp|A5E3K3.1|DBP4_LODEL RecName: Full=ATP-dependent RNA helicase DBP4
gi|146451755|gb|EDK46011.1| hypothetical protein LELG_04190 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 775
Score = 205 bits (522), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 142/463 (30%), Positives = 241/463 (52%), Gaps = 34/463 (7%)
Query: 377 SQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLP 436
S K F + I+ T++ L ++ +T +Q+ ++ L+G+D + A+TG+GK++AFL+P
Sbjct: 46 SIKHFSDLPITQNTLRGLKECSFVSLTDIQKKSIPVALKGEDLMGTARTGSGKTLAFLIP 105
Query: 437 AIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRF 496
IE +L+ + L LI+ PTRELA QI E +A + ++ + GG
Sbjct: 106 VIEILLRNDITEYDGLA----ALIVSPTRELAVQIF-EVLAKIGKYNSFSAGLVTGGKDV 160
Query: 497 KVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVE 556
+ ++ R+ ILV TPGR+ H+ G+ L++LVLDEAD LD+GFRK ++
Sbjct: 161 QYEKERISR--MNILVGTPGRISQHLNESVGMETS--NLQVLVLDEADRCLDMGFRKQID 216
Query: 557 NIVDCLPRRRQSLLFSATMPKEL--VLKREHTYIDTVGLGSVE----TPVKIKQSCLVAP 610
NI++ LPR RQ+LLFSAT + + + T +G S + P + Q + P
Sbjct: 217 NILNHLPRTRQTLLFSATHTDSVQDLARLSLTNPKRIGTSSDQDISAIPESLDQYYVKVP 276
Query: 611 HELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK--MNVREMYSRKPQL 668
+L +K H+ K++VF S+ Y R ++ + + ++Y R Q
Sbjct: 277 LNEKLDVLWSFIKSHLKS----KILVFFSSSKQVQYAYETFRTLQPGIPLMKLYGRHKQT 332
Query: 669 YRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKE 728
R + +F ++ L +D+ ARG+D+P + V+QV P D Y+HR+GR+ R G++
Sbjct: 333 SRLETTVKFSQAQHACLFATDIVARGLDFPAIDWVIQVDCPEDVATYVHRVGRSARFGRQ 392
Query: 729 GEGVLLLAPWEEYFLDDLKDLPLDKLQLPHLN------PEIQLQMDNHMAKIDNNVKEAA 782
G+ +L+L P EE + LK + + K++ +N I+ Q+ + K D +K
Sbjct: 393 GKSLLMLLPTEEDGM--LKRMKVHKIEPKMMNIKEKSKKSIRPQLQSLCFK-DPVIKNLG 449
Query: 783 YHAWLGYYNSIREIGRDKTTLV--EL-ANKFAQSIGLQRPPPL 822
A++ Y+ S+ I +DK EL ++A S+GL P +
Sbjct: 450 QRAFIAYFRSVY-IQKDKDIFKVDELPVEEYAASLGLPGAPKI 491
>gi|449269740|gb|EMC80491.1| putative ATP-dependent RNA helicase DDX10, partial [Columba livia]
Length = 816
Score = 205 bits (522), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 145/460 (31%), Positives = 247/460 (53%), Gaps = 37/460 (8%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
+RF + +S T+K L A Y +T +Q T+ L+GKD + AKTG+GK++AF++PA+
Sbjct: 8 QRFSDFPLSKKTLKGLQEAQYRVVTEIQRQTIGLALQGKDILGAAKTGSGKTLAFIVPAL 67
Query: 439 EAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
E + + +S L VLI+ PTRELA Q + KNH+ L ++GG K
Sbjct: 68 ELLYRQQWTSADGL----GVLIISPTRELAYQTFKVLRKVGKNHEFSAGL-VIGGKDLKE 122
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
+ R+ +L+ TPGRLL H++ S L+ML+LDEAD +LD+GF + I
Sbjct: 123 ESERIHH--INMLICTPGRLLQHMDETSYFYAS--DLQMLILDEADRILDMGFADTMNAI 178
Query: 559 VDCLPRRRQSLLFSATMPKEL-----VLKREHTYIDTVGLGSVETPVKIKQSCLVAPHEL 613
++ LP++RQ+LLFSAT K + + ++ Y+ TP + Q+ +V +
Sbjct: 179 LENLPKKRQTLLFSATQTKSVKDLARLSLKDPEYVWVHERAKFSTPATLDQNYVVCDLQQ 238
Query: 614 HFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK--MNVREMYSRKPQLYRD 671
+L+ L+ H+ K IVF ++ L+ + +++ + V ++ ++ Q+ R
Sbjct: 239 KVNMLYSFLRTHL----KKKTIVFFASCKEVQYLFRVFCKLQPGLPVLALHGKQHQMKRM 294
Query: 672 RISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEG 731
+ F K +L +D++ARG+D+P V V+Q P D YIHR+GRT R + GE
Sbjct: 295 EVYTCFVRKKAAVLFATDIAARGLDFPAVNWVIQFDCPEDANTYIHRVGRTARYKEGGEA 354
Query: 732 VLLLAPWEEY-FLDDL--KDLPLDKLQLPHLNPE----IQLQMDNHMAKIDNNVKEAAYH 784
+L+L P EE ++ L + +P+ +++ +NPE IQ ++ +A+ D +K+ A
Sbjct: 355 LLVLLPSEEKGMVEQLAQRKVPVTEIK---INPEKLTDIQKRLQAFLAQ-DQELKDKAQR 410
Query: 785 AWLGYYNSIREIGRDKTTL----VELANKFAQSIGLQRPP 820
++ Y S+ + ++K + LA ++A S+GL P
Sbjct: 411 CFVSYLRSVY-LMKNKEVFDVFKLPLA-EYALSLGLAMAP 448
>gi|353227469|emb|CCA77977.1| probable HAS1-helicase associated with Set1p [Piriformospora indica
DSM 11827]
Length = 559
Score = 205 bits (522), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 153/458 (33%), Positives = 242/458 (52%), Gaps = 31/458 (6%)
Query: 378 QKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPA 437
++ F +S T K L A G+ MT +QE T+ L GKD + AKTG+GK++AFL+P+
Sbjct: 26 KRAFSTLELSGPTAKGLEAMGFTTMTEIQEKTIPHLLAGKDVLGAAKTGSGKTLAFLIPS 85
Query: 438 IEAV--LKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHD-GIGVLTLVGGT 494
+E + LK + T ++ ++ PTRELA QI A L+++H +G++ +GG
Sbjct: 86 VELLCRLKFKPRNGTGII------VVSPTRELALQIFGVAKELMEHHSQTLGIV--MGGA 137
Query: 495 RFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKD 554
K + +L +L+ATPGRLLDH+EN G + L+ LV+DEAD +L++GF ++
Sbjct: 138 NRKAEVDKLVKG-VNLLIATPGRLLDHLENTPGFVFK--NLRALVIDEADRILEVGFEEE 194
Query: 555 VENIVDCLPRR-RQSLLFSATMPKELV------LKREHTYIDTVGLGSVETPVKIKQSCL 607
++ I+ LP RQS+LFSAT ++ L+ TYI+ T + Q +
Sbjct: 195 MKKIIKILPNENRQSMLFSATQTTKVADLARISLRPGPTYINVDSAKDTSTVTTLSQGYV 254
Query: 608 VAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQ 667
V P + F +L L++++ KV+VF S+ LL + + V +++ ++ Q
Sbjct: 255 VCPSDRRFLLLFTFLRKNL----KKKVVVFFSSCNSVKYHSELLNYIDVPVMDLHGKQKQ 310
Query: 668 LYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGK 727
R EF +K+ IL+ +DV+ARG+D P+V +VQ P D YIHR+GRT R GK
Sbjct: 311 QKRTNTFFEFCNAKQGILLCTDVAARGLDIPEVDWIVQFDPPDDPRDYIHRVGRTARAGK 370
Query: 728 EGEGVLLLAPWEEYFLDDLKD--LPLDKLQLPHLN-PEIQLQMDNHMAKIDNNVKEA--A 782
G+ +L L E FL LK+ +PL++ P +Q Q++ + K + A
Sbjct: 371 TGKSLLFLLESELGFLRYLKEAKVPLNEYNFPSEKIANVQTQLEKLLQKNYYLHRSATDG 430
Query: 783 YHAWLGYYNSIREIGRDKTTLVELANKFAQSIGLQRPP 820
Y ++L Y S ++L K +S G PP
Sbjct: 431 YRSYLQAYASYSLKSIFDVNKLDLV-KVGKSFGFTVPP 467
>gi|50302969|ref|XP_451422.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|74607669|sp|Q6CXB7.1|HAS1_KLULA RecName: Full=ATP-dependent RNA helicase HAS1
gi|49640553|emb|CAH03010.1| KLLA0A09669p [Kluyveromyces lactis]
Length = 497
Score = 205 bits (522), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 160/463 (34%), Positives = 241/463 (52%), Gaps = 46/463 (9%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F + +S T+KA+ G+ QMT VQ T+ L GKD + AKTG+GK++AFL+PAIE
Sbjct: 36 FSDLKLSDGTMKAIGKMGFTQMTAVQTRTIPPLLAGKDVLGAAKTGSGKTLAFLIPAIEM 95
Query: 441 V--LKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHD-GIGVLTLVGGTRFK 497
+ LK + T V+++ PTRELA QI A L++ H G++ +GG
Sbjct: 96 LHSLKFKPRNGTG------VIVITPTRELALQIFGVARELMEFHSQTFGIV--IGGA--- 144
Query: 498 VDQRRLESDP----CQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRK 553
RR E+D IL+ATPGRLLDH++N G + LK LV+DEAD +L++GF
Sbjct: 145 --NRRQEADKLMKGVNILIATPGRLLDHLQNTKGFIFK--NLKALVIDEADRILEIGFED 200
Query: 554 DVENIVDCLPRR-RQSLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSC 606
++ I+ LP RQS+LFSAT + + L+ +I+ T ++Q
Sbjct: 201 EMRQIIKILPNEDRQSMLFSATQTTKVEDLARISLRPGPLFINVDSEKDTSTADGLEQGY 260
Query: 607 LVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKP 666
+V + F +L LK + KVIVF S+ LL + + V E++ ++
Sbjct: 261 VVCESDKRFLLLFSFLKRN----QKKKVIVFLSSCNSVKYYAELLNYIDLPVLELHGKQK 316
Query: 667 QLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREG 726
Q R EF ++R ILV +DV+ARG+D P V ++Q P D YIHR+GRT R
Sbjct: 317 QQKRTNTFFEFCNAERGILVCTDVAARGLDIPAVDWIIQFDPPDDPRDYIHRVGRTARGT 376
Query: 727 K-EGEGVLLLAPWEEYFLDDLK--DLPLDKLQLPH---LNPEIQLQMDNHMAKIDNNVKE 780
K +G+ ++ L P E FL LK +PL++ + P N + QL+ + + +
Sbjct: 377 KGKGKSLMFLTPTELGFLRYLKAAKVPLNEYEFPTNKIANVQAQLEKLIKSNYYLHQIAK 436
Query: 781 AAYHAWLGYY--NSIREIGR-DKTTLVELANKFAQSIGLQRPP 820
Y ++L Y +S++ + + DK L K A+S G PP
Sbjct: 437 DGYRSYLQAYASHSLKTVYQIDKLDLA----KVAKSYGFPVPP 475
>gi|373122199|ref|ZP_09536064.1| hypothetical protein HMPREF0982_00993 [Erysipelotrichaceae
bacterium 21_3]
gi|422329691|ref|ZP_16410716.1| hypothetical protein HMPREF0981_04036 [Erysipelotrichaceae
bacterium 6_1_45]
gi|371655914|gb|EHO21250.1| hypothetical protein HMPREF0981_04036 [Erysipelotrichaceae
bacterium 6_1_45]
gi|371664132|gb|EHO29314.1| hypothetical protein HMPREF0982_00993 [Erysipelotrichaceae
bacterium 21_3]
Length = 609
Score = 205 bits (522), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 125/366 (34%), Positives = 199/366 (54%), Gaps = 21/366 (5%)
Query: 376 LSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLL 435
++ F+E IS +KA+ GY T +Q ++ +EGKD + ++ TGTGK+ AF +
Sbjct: 23 VTMTTFNELQISSEVMKAVEEMGYENATDIQAQSIPLIMEGKDVLGRSNTGTGKTAAFGI 82
Query: 436 PAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTR 495
PAIE V + T LI+CPTREL +Q+A E K +G+ ++ + GG
Sbjct: 83 PAIEKVCQGTRYPNA--------LIICPTRELVTQVATELRKFSKYKEGVKIVPIYGGQP 134
Query: 496 FKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDV 555
Q +L C I+V TPGR++DH+ ++ ++L M++LDEAD +L++GF++D+
Sbjct: 135 ID-RQIQLLKRGCGIVVGTPGRIMDHLNRRT---LKLDNTNMVILDEADEMLNMGFKEDI 190
Query: 556 ENIVDCLPR--RRQSLLFSATMPKELVLKREHTYIDTVGL---GSVETPVKIKQSCLVAP 610
E I+ +P Q++LFSAT P E++ + D V + + T ++Q AP
Sbjct: 191 EEILSMMPEGNEHQTILFSATWPAEILRITKEFQNDPVRVEIKSAQRTIDTVEQIYYDAP 250
Query: 611 HELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYR 670
L LL + PD ++FC+T + L L + + ++ Q +R
Sbjct: 251 RGKKANALRVLLSHY---DPDL-CMIFCNTKKMVDELCDELNKHNIKAISLHGDMKQEFR 306
Query: 671 DRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGE 730
R+ E+FR+ IL+ +DV+ARG+D D+ VV IP D E YIHR+GRTGR GK+G
Sbjct: 307 SRVMEQFRSGNYPILIATDVAARGIDVDDIDLVVNFDIPQDNEYYIHRVGRTGRAGKKGL 366
Query: 731 GVLLLA 736
+ L++
Sbjct: 367 AITLVS 372
>gi|242032643|ref|XP_002463716.1| hypothetical protein SORBIDRAFT_01g004730 [Sorghum bicolor]
gi|241917570|gb|EER90714.1| hypothetical protein SORBIDRAFT_01g004730 [Sorghum bicolor]
Length = 623
Score = 205 bits (522), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 163/473 (34%), Positives = 253/473 (53%), Gaps = 49/473 (10%)
Query: 375 ILSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFL 434
ILS K F E IS LT KA+ Y +T++Q ++ LEGKD + AKTG+GK++AFL
Sbjct: 123 ILSNKLFSELPISELTAKAIREMNYTHLTQIQARSIPHLLEGKDVMGAAKTGSGKTLAFL 182
Query: 435 LPAIEAV--LKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVG 492
+PAIE + L+ +S + T V+++CPTRELA Q A L+K H + ++G
Sbjct: 183 IPAIELLYHLRFSSRNGTG------VIVVCPTRELAIQTHNVAKELMKYHSQT-LGYVIG 235
Query: 493 GTRFKVDQRRLESDP----CQILVATPGRLLDHIEN-KSGLSVRLMGLKMLVLDEADHLL 547
G + RR E+D +LVATPGRLLDH++N KS + R LK LV+DEAD +L
Sbjct: 236 G-----NNRRSEADQLAKGVNLLVATPGRLLDHLQNTKSFIYKR---LKCLVIDEADRIL 287
Query: 548 DLGFRKDVENIVDCLPRRRQSLLFSATMPKEL-------VLKREHTYIDTVGLG-----S 595
+ F +D++ I LP+ RQ++LFSAT E+ K E + V +G S
Sbjct: 288 EQNFEEDMKQIFKRLPQNRQTVLFSATQTPEVEKFAKLSFEKNEESKEKPVYVGVDDDKS 347
Query: 596 VETPVKIKQSCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK 655
T ++Q V E F +L+ LK+ + K++VF S+ LL +
Sbjct: 348 KATVEGLQQGYCVISSEKRFLVLYAFLKK----KQNKKIMVFFSSCNSVKFHAELLNFLG 403
Query: 656 MNVREMYSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQY 715
++ +++ ++ Q R F +++ IL+ ++V+ARG+D PDV +VQ P + + Y
Sbjct: 404 IDCSDIHGKQKQQKRTTTFFSFCKAEKGILLCTNVAARGLDIPDVDYIVQYDPPDEPKDY 463
Query: 716 IHRLGRTGR-EGKEGEGVLLLAPWEEYFLDDLK--DLPLDKLQLPHLN-PEIQLQMDNHM 771
IHR+GRT R E +G +L L P E FL LK + L + + N P +Q ++N +
Sbjct: 464 IHRVGRTARGEKGKGSALLFLLPEELKFLIYLKAAKVTLTEYEFNQKNVPNLQSHLENIV 523
Query: 772 AK---IDNNVKEAAYHAWLGYYNSIREIGRDKTTLVEL-ANKFAQSIGLQRPP 820
+ ++ + KE AY +++ Y+S +D + +L K A S + PP
Sbjct: 524 GENYFLNQSAKE-AYRSYVLAYDS--HSMKDIFNVHQLDLQKVAASFCFRNPP 573
>gi|424741474|ref|ZP_18169827.1| DEAD/DEAH box helicase [Acinetobacter baumannii WC-141]
gi|422944863|gb|EKU39840.1| DEAD/DEAH box helicase [Acinetobacter baumannii WC-141]
Length = 585
Score = 205 bits (522), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 124/365 (33%), Positives = 198/365 (54%), Gaps = 19/365 (5%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
K F E + +AL G+ T VQE + A LEGKD +V ++TG+GK+ AFLLP +
Sbjct: 3 KTFAEFSLHETLQQALEGLGFTAPTPVQEQAIPAALEGKDLLVSSQTGSGKTAAFLLPTL 62
Query: 439 EAVLKATS----SSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGT 494
A+ + + V +L++ PTRELA Q++ +AIAL+++ G+ + ++GG
Sbjct: 63 NALAGQETVVPFKDRMKAVTQPNILVISPTRELAQQVSQDAIALVRHMKGVRIAAIMGGM 122
Query: 495 RFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKD 554
F ++L+ Q++VATPGRLLD + + ++L + L++DEAD +LDLGF +D
Sbjct: 123 PFAKQIQQLKG--AQVVVATPGRLLDLVNRRQ---IKLDQVDALIVDEADRMLDLGFSED 177
Query: 555 VENIVDCLPRRRQSLLFSATMPKELVLKREHTYIDTVGLGSVETPVKIKQSCLVAPH--- 611
+E I + R+Q+L+FSAT ++ D + + ++ET H
Sbjct: 178 LEAISELAANRKQTLMFSATFADRIIRLASCMMKDPMRI-AIETGHSTNTDITQTLHWTD 236
Query: 612 --ELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLY 669
E ++L H L + L + +VF ST T +L L E +V ++ PQ
Sbjct: 237 GFEHKKKLLTHWLSDENLD----QAVVFASTQEDTDMLAEELAEAGHSVVALHGAMPQTV 292
Query: 670 RDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEG 729
R+R R + ILV +DV+ARG+D P ++ V+ G+P E Y+HR+GRTGR G+ G
Sbjct: 293 RNRRLRSIREGRAKILVATDVAARGLDVPTISHVINFGLPMKHEDYVHRIGRTGRAGRTG 352
Query: 730 EGVLL 734
+ + L
Sbjct: 353 QAITL 357
>gi|48146237|emb|CAG33341.1| DDX18 [Homo sapiens]
Length = 610
Score = 205 bits (522), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 152/451 (33%), Positives = 243/451 (53%), Gaps = 41/451 (9%)
Query: 390 TIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSST 449
T+KA+ G+ MT +Q ++ LEG+D + AKTG+GK++AFL+PA+E ++K
Sbjct: 130 TLKAIKEMGFTNMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPAVELIVK------ 183
Query: 450 TQLVP--PIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDP 507
+ +P VLIL PTRELA Q L+ +H L ++GG+ + ++L +
Sbjct: 184 LRFMPRNGTGVLILSPTRELAMQTFGVLKELMTHHVHTYGL-IMGGSNRSAEAQKL-GNG 241
Query: 508 CQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQ 567
I+VATPGRLLDH++N G + L+ LV+DEAD +LD+GF ++++ I+ LP RRQ
Sbjct: 242 INIIVATPGRLLDHMQNTPGFMYK--NLQCLVIDEADRILDVGFEEELKQIIKLLPTRRQ 299
Query: 568 SLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILHHL 621
++LFSAT ++ + LK+ Y+ + T ++Q +V P E F +L
Sbjct: 300 TMLFSATQTRKVEDLARISLKKGPLYVGVDDDKANATVDGLEQGYVVCPSEKRFLLLFTF 359
Query: 622 LKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEFRASK 681
LK++ K++VF S+ M Y LL + + V ++ ++ Q R +F +
Sbjct: 360 LKKN----RKKKLMVFFSSCMSVKYHYELLNYIDLPVLAIHGKQKQNKRTTTFFQFCNAD 415
Query: 682 RLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEG--VLLLAPWE 739
L+ +DV+ARG+D P+V +VQ P D ++YIHR+GRT R G G G +L+L P E
Sbjct: 416 SGTLLCTDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTAR-GLNGRGHALLILRPEE 474
Query: 740 EYFLDDLKD--LPLDKLQLPHLN-PEIQLQMDNHMAKIDNNVKEAAYHAWLGYYNSIREI 796
FL LK +PL + +IQ Q++ + K + + ++A A+ Y IR
Sbjct: 475 LGFLRYLKQSKVPLSEFDFSWSKISDIQSQLEKLIEK-NYFLHKSAQEAYKSY---IR-- 528
Query: 797 GRDKTTLVELAN-------KFAQSIGLQRPP 820
D +L ++ N + A S G + PP
Sbjct: 529 AYDSHSLKQIFNVNNLNLPQVALSFGFKVPP 559
>gi|328856886|gb|EGG06005.1| hypothetical protein MELLADRAFT_36393 [Melampsora larici-populina
98AG31]
Length = 668
Score = 205 bits (522), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 152/464 (32%), Positives = 232/464 (50%), Gaps = 45/464 (9%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F + IS T+K L AA Y ++T +Q +L L GKD + A+TG+GK++AFL+P +E
Sbjct: 1 FTDIPISAATLKGLQAAKYTKLTPIQALSLPRALMGKDVLGAARTGSGKTLAFLIPVLEM 60
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+ ++ L L++ PTRELA QI ++ K H L ++GG + ++
Sbjct: 61 LYRSKWGHMDGL----GALVISPTRELAVQIFEVLRSIGKFHSFSAGL-VIGGKSLEDER 115
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
RL IL+ATPGRL H+E +G L++LVLDEAD +LD+GF + I+
Sbjct: 116 ERLSK--MNILIATPGRLQQHLEQTTGFDCD--NLQVLVLDEADRILDMGFSNSINAIIS 171
Query: 561 CLPRRRQSLLFSATMPKE------LVLKREHTYIDTVGLG---SVETPVKIKQSCLVAPH 611
LP RQ+LLFSAT K L L + Y+ G + TP ++ QS +V
Sbjct: 172 SLPASRQTLLFSATQTKSVKDLARLSLSEDPEYVAARETGVDRDLTTPKELHQSYMVIDL 231
Query: 612 ELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK--MNVREMYSRKPQLY 669
+ L LK H+ K+IVF S+ +Y R M+ M + ++ ++ Q
Sbjct: 232 QSKMDYLWTFLKTHLKN----KMIVFLSSCKQVRFVYETFRHMRPGMPLLHLHGKQKQTK 287
Query: 670 RDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEG 729
R I E F +S L +D++ARG+D+P + VVQ P D + Y+HR+GRT R G
Sbjct: 288 RLEIYERFSSSPEACLFATDIAARGLDFPSIDWVVQADCPEDLDTYVHRVGRTARYQSGG 347
Query: 730 EGVLLLAP---------WEEYFLDDLKDLPLDKLQLPHLNPEIQLQMDNHMAKIDNNVKE 780
+ ++ L P WEE ++ K P D + IQ ++ M K ++K
Sbjct: 348 KALIFLLPSEEEGMVSKWEERGIEVKKVKPNDSRK-----QTIQHKLQAQMFKFP-DIKF 401
Query: 781 AAYHAWLGYYNSIREIGRDKTTL----VELANKFAQSIGLQRPP 820
A++ Y SI + R+K ++L FA+S+GL P
Sbjct: 402 LGQRAFISYVRSIY-LQRNKKIFKLDQLDL-TAFAESLGLPGAP 443
>gi|403381239|ref|ZP_10923296.1| DEAD/DEAH box helicase [Paenibacillus sp. JC66]
Length = 522
Score = 205 bits (522), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 137/394 (34%), Positives = 211/394 (53%), Gaps = 27/394 (6%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
K F + G+ P +KA+T G+ + T +QE T+ ++G D + +A+TGTGK+ AF +P I
Sbjct: 2 KNFTDFGLEPKVLKAITEMGFEEATPIQEKTIPLAMQGLDLIGQAQTGTGKTAAFSIPLI 61
Query: 439 EAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
+ TS S I L++CPTRELA Q+A E I L GI L + GG
Sbjct: 62 HKI--ETSQSK------IVALVMCPTRELAIQVAEE-IEKLGRFKGIRSLPIYGGQDIVK 112
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
R L+ P QI++ TPGRLLDHI K+ +RL ++ +VLDEAD +LD+GF +D++ I
Sbjct: 113 QIRALKKRP-QIIIGTPGRLLDHINRKT---IRLEDVETVVLDEADEMLDMGFMEDIQAI 168
Query: 559 VDCLPRRRQSLLFSATMPKELV-----LKREHTYIDTVGLGSVETPVKIKQSCLVAPHEL 613
+ +P R ++LFSATMP + R+ ++ + V P+ I+Q+ + +
Sbjct: 169 LSQVPEERHTMLFSATMPPNIQKLAQQFLRDPQHVSVIP-KQVSAPL-IQQAYIEVHEKQ 226
Query: 614 HFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRI 673
F+ L L+ + PD I+F T L L++ + ++ Q RD +
Sbjct: 227 KFEALCRLID---MEAPDL-AIIFGRTKRRVDELSEALQKRGYSAEGLHGDLSQNQRDNV 282
Query: 674 SEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVL 733
+FR +LV +DV+ARG+D V+ VV +P D E Y+HR+GRTGR GKEG
Sbjct: 283 MRKFRDGSIDVLVATDVAARGLDVSGVSHVVNFDLPQDPESYVHRIGRTGRAGKEGTAWT 342
Query: 734 LLAPWE---EYFLDDLKDLPLDKLQLPHLNPEIQ 764
+ P E +F++ + + + LP L I+
Sbjct: 343 FVTPREIDHLHFIERVTRHRITRKPLPSLAEAIE 376
>gi|190404852|gb|EDV08119.1| RNA helicase DEAD box [Saccharomyces cerevisiae RM11-1a]
Length = 664
Score = 205 bits (522), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 151/476 (31%), Positives = 246/476 (51%), Gaps = 39/476 (8%)
Query: 392 KALTAAGYIQMTRVQEATLSACL--EGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSST 449
KA+T + +T VQ+ T+ L E D + +AKTGTGK+ AFL+P + ++ S
Sbjct: 119 KAITRMEFPGLTPVQQKTIKPILSSEDHDVIARAKTGTGKTFAFLIPIFQHLINTKFDSQ 178
Query: 450 TQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGI---GVLTLVGGTRFKVDQRRLESD 506
+ +I+ PTR+LA QI AE + + G+ ++LVGGT F+ ++
Sbjct: 179 YM----VKAVIVAPTRDLALQIEAEVKKIHDMNYGLKKYACVSLVGGTDFRAAMNKMNKL 234
Query: 507 PCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRR 566
I++ATPGRL+D +E S R + K VLDEAD LL++GFR D+E I L +
Sbjct: 235 RPNIVIATPGRLIDVLEKYSNKFFRFVDYK--VLDEADRLLEIGFRDDLETISGILNEKN 292
Query: 567 -------QSLLFSATM-------PKELVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHE 612
++LLFSAT+ ++ K+E ++DTV E +I QS +++
Sbjct: 293 SKSADNIKTLLFSATLDDKVQKLANNIMNKKECLFLDTVDKNEPEAHERIDQSVVISEKF 352
Query: 613 LH--FQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLR-EMK--MNVREMYSRKPQ 667
+ F + H+ K+ +YK I+F T TS L +L+ E K + + E + + Q
Sbjct: 353 ANSIFAAVEHIKKQIKERDSNYKAIIFAPTVKFTSFLCSILKNEFKKDLPILEFHGKITQ 412
Query: 668 LYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGK 727
R + + F+ + ILV +DV ARGMD+P+V V+Q+G+P + YIHR+GRT R GK
Sbjct: 413 NKRTSLVKRFKKDESGILVCTDVGARGMDFPNVHEVLQIGVPSELANYIHRIGRTARSGK 472
Query: 728 EGEGVLLLAPWEEYF---LDDLKDLPLDKLQLPHLNPEIQLQMDNHMAKIDNNVKEAAYH 784
EG VL + E F L+D K++ + K + + EI+ ++ + + ++ +
Sbjct: 473 EGSSVLFICKDELPFVRELEDAKNIVIAKQEKYEPSEEIKSEVLEAVTEEPEDISDIVIS 532
Query: 785 AWLGYYNSIREI-GRDKTTLVELANKFAQSIGLQRPP---PLFRKTALKMGLKDIP 836
Y + I+E ++ L E+A+ + + L P P+ R+ K+GL P
Sbjct: 533 LISSYRSCIKEYRFSERRILPEIASTYG--VLLNDPQLKIPVSRRFLDKLGLSRSP 586
>gi|413916201|gb|AFW56133.1| putative DEAD-box ATP-dependent RNA helicase family protein [Zea
mays]
Length = 603
Score = 205 bits (522), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 168/520 (32%), Positives = 261/520 (50%), Gaps = 47/520 (9%)
Query: 295 DSDIDSEDVDEKVEGWRDVKKMGSSASLGKYDMKITKRVPLKSLEDEHDFEEQVELIRKE 354
++D E VDE R+ K + K M KR EDE EE+ + KE
Sbjct: 35 EADRKKEKVDETERMAREKKNTHEKEQIRKVVMGKRKRN-----EDELGMEEKQMIAEKE 89
Query: 355 ISKNKLNGNGEKKEKREEEPILSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACL 414
+ GNG IL+ K F E IS LT KA+ Y +T +Q ++ +
Sbjct: 90 KEEKVKKGNGG--------GILTTKLFSELYISELTAKAIREMNYSHLTEIQARSIPHLM 141
Query: 415 EGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLVP--PIYVLILCPTRELASQIA 472
G D + AKTG+GK++AFL+PAIE + KA+ +P V+++CPTRELA Q
Sbjct: 142 LGNDVLGSAKTGSGKTLAFLIPAIELLHKAS------FMPRNGTGVIVVCPTRELAMQTH 195
Query: 473 AEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRL 532
A L+K H + ++GGT + D +L +LVATPGRLLDH+ N + +
Sbjct: 196 NVAKELMKYHSQT-LGYVIGGTNMRNDANQLLKG-INLLVATPGRLLDHLRNTRSFNYK- 252
Query: 533 MGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQSLLFSATMPKELVLKREHTYIDT-- 590
L+ L++DEAD +L+ F +D++ I LP+ RQ++LFSAT +++V T+
Sbjct: 253 -RLQCLIIDEADRILEQNFEEDMKQIFKRLPQDRQTVLFSATQNQKVVEFANFTFGQNEE 311
Query: 591 -----VGLGSVETPVK-----IKQSCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCST 640
V +G ++ +K ++Q V P E F +L+ L+ L D KV+VF S+
Sbjct: 312 RQKKLVYVGVDDSKLKPTVEGLQQGYCVIPSEKRFLVLYAFLRRMQLRKEDLKVMVFFSS 371
Query: 641 GMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDV 700
L + + +++ ++ Q R +F K IL+ ++V+ARG+D PDV
Sbjct: 372 CSSVKFHAEFLNFLGIGCYDIHGQQKQQKRTSTFFQFLKEKNGILLCTNVAARGLDIPDV 431
Query: 701 TSVVQVGIPPDREQYIHRLGRTGREGK-EGEGVLLLAPWEEYFLDDLKDLPLDKLQL--- 756
+VQ P D + YIHR+GRT R K +G +L L P E L L+ + +
Sbjct: 432 DYIVQFDPPDDPKDYIHRVGRTARGDKGKGSALLFLLPEELKLLIYLQAAKISLTEYVFS 491
Query: 757 -PHLNPEIQLQMDNHMAK---IDNNVKEAAYHAWLGYYNS 792
H+ P+ Q Q+++ + ++ + KE AY ++L YNS
Sbjct: 492 EKHV-PKSQSQLEDVVGGNYFLNQSAKE-AYRSYLLSYNS 529
>gi|194892032|ref|XP_001977582.1| GG19124 [Drosophila erecta]
gi|190649231|gb|EDV46509.1| GG19124 [Drosophila erecta]
Length = 827
Score = 205 bits (522), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 155/504 (30%), Positives = 257/504 (50%), Gaps = 50/504 (9%)
Query: 352 RKEISKNKLNGNG----EKKEKREEEPILSQKRFDECGISPLTIKALTAAGYIQMTRVQE 407
R+E++K++L E + K E S K+F + +S T KAL + ++ T+VQ
Sbjct: 41 RQELNKSRLAATEAEIRELQAKYAEIDATSIKKFAQFPLSKKTQKALAESKFVHPTQVQR 100
Query: 408 ATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLVPPIYVLILCPTREL 467
++ L+GKD + A TG+GK++AFL+P +E + S T + +I+ PTREL
Sbjct: 101 DSIGPALQGKDVLGAAVTGSGKTLAFLIPVLEHLFMNKWSRTDG----VGAIIISPTREL 156
Query: 468 ASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSG 527
A QI + K+HD L ++GG K ++ R+ D C IL+ TPGRLL H++
Sbjct: 157 AYQIFETLKKVGKHHDFSAGL-IIGGKNLKFERTRM--DQCNILICTPGRLLQHMDENPL 213
Query: 528 LSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQSLLFSATMPKEL-----VLK 582
+ M ++LVLDEAD LD+GF+K + +I++ P RQ+LLFSAT + +
Sbjct: 214 FNTSTM--EVLVLDEADRCLDMGFQKALNSIIENFPPVRQTLLFSATQTNTVQDLARLNL 271
Query: 583 REHTYIDTVGLGSVETPVK----------------IKQSCLVAPHELHFQILHHLLKEHI 626
++ Y+ G E P ++QS +V E +L +K H+
Sbjct: 272 KDPVYVGYGGATPGEEPSSSTKKAPSTAVLAVPELLQQSYVVLNLEDKITMLWSFIKNHL 331
Query: 627 LGTPDYKVIVFCSTGMVTSLLYLLLREMKMN--VREMYSRKPQLYRDRISEEFRASKRLI 684
K+IVF S+ LY + +++ + +Y Q R I E+F ++
Sbjct: 332 ----KQKIIVFVSSCKQAKYLYEIFCKLRPGSPLLALYGTLHQDRRIAIYEDFLRKSHVV 387
Query: 685 LVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLAPW-EEYFL 743
+ ++DV++RG+D+P V VVQ+ P D QYIHR GR+ R GE +L+L P EEY +
Sbjct: 388 MFSTDVASRGLDFPAVNWVVQLDCPEDVSQYIHRAGRSARNKTRGECLLVLTPSEEEYMI 447
Query: 744 DDLKDLPLDKLQLPHLNPE----IQLQMDNHMAKIDNNVKEAAYHAWLGYYNSIREIGRD 799
LK+ ++ ++P+ +++++ +A+ ++ A A+L Y S+ + R+
Sbjct: 448 GALKEQLNIDIRCVQIDPKKLFSPRVKIEAFLAQFP-ELRATAQRAFLSYIKSVF-LMRN 505
Query: 800 KTTLVELA---NKFAQSIGLQRPP 820
K + + FAQS+GL P
Sbjct: 506 KRLFNVFSLDLDAFAQSLGLAVTP 529
>gi|224826248|ref|ZP_03699350.1| DEAD/DEAH box helicase domain protein [Pseudogulbenkiania
ferrooxidans 2002]
gi|224601349|gb|EEG07530.1| DEAD/DEAH box helicase domain protein [Pseudogulbenkiania
ferrooxidans 2002]
Length = 456
Score = 205 bits (522), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 134/372 (36%), Positives = 199/372 (53%), Gaps = 12/372 (3%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F E G+SP ++A+ GY + T +Q + L G+D + A+TGTGK+ AF+LP +E
Sbjct: 3 FAELGLSPEILRAIDEQGYSEPTPIQAKAIPLVLSGRDLLAAAQTGTGKTAAFMLPILER 62
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+ K S+S + + P+ LIL PTRELA QIA A A K + + + GG
Sbjct: 63 LKKFASTSASPAMHPVRALILSPTRELADQIAVNAAAYTK-YLPLRSTVVFGGMNMDPQT 121
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
+ L +IL+ATPGRLLDH+ K +V+L + +LVLDEAD +LD+GF D+ I+
Sbjct: 122 QELRRG-VEILIATPGRLLDHVGQK---TVQLNKVDVLVLDEADRMLDMGFINDIRKILG 177
Query: 561 CLPRRRQSLLFSATMPKELVLKREHTYID--TVGLG-SVETPVKIKQSCLVAPHELHFQI 617
LPR RQ+LLFSAT E+ E D TV + T +++Q + +
Sbjct: 178 MLPRTRQTLLFSATFAPEIKRLAEEFMHDPQTVEVARQNSTNAQVEQLVFSVDSQRKRYL 237
Query: 618 LHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEF 677
L HL++E +G +VIVFC T + L L+ ++ K Q R F
Sbjct: 238 LSHLIRERQMG----QVIVFCKTKLSADQLARDLKRDGHAAEAIHGDKAQGARLETLTAF 293
Query: 678 RASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLAP 737
+ + +LV +DV+ARG+D ++ VV +P E Y+HR+GRTGR G G + L+
Sbjct: 294 KNGEVKVLVATDVAARGLDISELPYVVNFELPNAPEDYVHRIGRTGRAGASGVAISLMGQ 353
Query: 738 WEEYFLDDLKDL 749
E L+ ++ L
Sbjct: 354 DEGKQLEAIEKL 365
>gi|170039659|ref|XP_001847645.1| ATP-dependent RNA helicase DBP4 [Culex quinquefasciatus]
gi|167863269|gb|EDS26652.1| ATP-dependent RNA helicase DBP4 [Culex quinquefasciatus]
Length = 735
Score = 205 bits (522), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 150/458 (32%), Positives = 240/458 (52%), Gaps = 35/458 (7%)
Query: 380 RFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIE 439
+F + +S T++ L Y T +Q ++ L+GKD + AKTG+GK++AFL+P E
Sbjct: 66 KFSDFPLSKKTVQGLAQGQYRVPTAIQRQSILPALQGKDILAAAKTGSGKTLAFLIPVFE 125
Query: 440 AVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVD 499
K ++ T+L + LI+ PTRELA QI + KNHD L ++GG K +
Sbjct: 126 ---KLYTNRWTRL-DGLGALIITPTRELALQIFETVAKIGKNHDFTTGL-IIGGQNLKFE 180
Query: 500 QRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIV 559
+ RL I++ TPGRLL H++ LK+LVLDEAD LD+GF+ + I+
Sbjct: 181 KSRLHQ--LNIIICTPGRLLQHMDTNPLFDC--TNLKVLVLDEADRCLDMGFQTAMNAII 236
Query: 560 DCLPRRRQSLLFSATMPKELVLKREHTYIDTVGLGSVE-----TPVKIKQSCLVAPHELH 614
+ LP RQ+LLFSAT K + D V + E TP +++Q+ +
Sbjct: 237 ENLPTTRQTLLFSATQTKSVKDLARLNLTDPVYIAPHEKEEYTTPSRLQQNYVTVELSEK 296
Query: 615 FQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVR--EMYSRKPQLYRDR 672
+L LK H K+IVF +T Y + R+++ ++ +Y Q R++
Sbjct: 297 LTMLWSFLKSH----SKQKIIVFFATCKQVRYHYEIFRKLRPSILLLPLYGGMNQEKRNK 352
Query: 673 ISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGV 732
I EF + + L+ +DV++RG+D+P V VVQ+ P D QYIHR GRT R GE +
Sbjct: 353 IYAEFCSRSNVCLMATDVASRGLDFPKVNWVVQLDCPEDATQYIHRAGRTARLNTAGESL 412
Query: 733 LLLAPWEEYFLDDLKDLPLDKLQLPHLNPEIQLQMDNHMAKIDN------NVKEAAYHAW 786
L+L P EE + + L K+ + +N +++ Q+ + + KI + +K+ A A+
Sbjct: 413 LVLLPQEEEGVVAM--LGRTKVPINKINVDLK-QLFSPLVKIQSFLAQSPELKDTAKRAF 469
Query: 787 LGYYNSIREIGRDKTTL----VELANKFAQSIGLQRPP 820
+ Y S+ + +DK+ ++L + FA+S+GL P
Sbjct: 470 VAYVKSV-ALMKDKSVFDVSKLDL-DAFAKSLGLLVTP 505
>gi|313898319|ref|ZP_07831856.1| DEAD-box ATP-dependent RNA helicase CshA [Clostridium sp. HGF2]
gi|312956701|gb|EFR38332.1| DEAD-box ATP-dependent RNA helicase CshA [Clostridium sp. HGF2]
Length = 585
Score = 205 bits (522), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 125/361 (34%), Positives = 197/361 (54%), Gaps = 21/361 (5%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F+E IS +KA+ GY T +Q ++ +EGKD + ++ TGTGK+ AF +PAIE
Sbjct: 4 FNELQISSEVMKAVEEMGYENATDIQAQSIPLIMEGKDVLGRSNTGTGKTAAFGIPAIEK 63
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
V + T LI+CPTREL +Q+A E K +G+ ++ + GG Q
Sbjct: 64 VCQGTRYPNA--------LIICPTRELVTQVATELRKFSKYKEGVKIVPIYGGQPID-RQ 114
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
+L C I+V TPGR++DH+ ++ ++L M++LDEAD +L++GF++D+E I+
Sbjct: 115 IQLLKRGCGIVVGTPGRIMDHLNRRT---LKLDNTNMVILDEADEMLNMGFKEDIEEILS 171
Query: 561 CLPR--RRQSLLFSATMPKELVLKREHTYIDTVGL---GSVETPVKIKQSCLVAPHELHF 615
+P Q++LFSAT P E++ + D V + + T ++Q AP
Sbjct: 172 MMPEGNEHQTILFSATWPAEILRITKEFQNDPVRVEIKSAQRTIDTVEQIYYDAPRGKKA 231
Query: 616 QILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISE 675
L LL + PD ++FC+T + L L + + ++ Q +R R+ E
Sbjct: 232 NALRVLLSHY---DPDL-CMIFCNTKKMVDELCDELNKHNIKAISLHGDMKQEFRSRVME 287
Query: 676 EFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLL 735
+FR+ IL+ +DV+ARG+D D+ VV IP D E YIHR+GRTGR GK+G + L+
Sbjct: 288 QFRSGNYPILIATDVAARGIDVDDIDLVVNFDIPQDNEYYIHRVGRTGRAGKKGLAITLV 347
Query: 736 A 736
+
Sbjct: 348 S 348
>gi|170701603|ref|ZP_02892549.1| DEAD/DEAH box helicase domain protein [Burkholderia ambifaria
IOP40-10]
gi|170133486|gb|EDT01868.1| DEAD/DEAH box helicase domain protein [Burkholderia ambifaria
IOP40-10]
Length = 571
Score = 205 bits (522), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 134/374 (35%), Positives = 207/374 (55%), Gaps = 16/374 (4%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
FD+ G++ +KA+ GY T +Q + L G+D + A+TGTGK+ +F LP I+
Sbjct: 87 FDQFGLAADILKAIAEQGYTTPTPIQAQAIPVVLAGRDVMGAAQTGTGKTASFSLPIIQR 146
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+L S+S + P+ LIL PTRELA Q+AA A K H + + GG
Sbjct: 147 LLPQASTSASPARHPVRALILTPTRELADQVAANVHAYAK-HTSLRSAVVFGGVDMNPQM 205
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
L +IL+ATPGRLLDH++ K + L +++LVLDEAD +LD+GF D++ I++
Sbjct: 206 AELRRG-VEILIATPGRLLDHVQQK---TANLGQVQILVLDEADRMLDMGFLPDLQRILN 261
Query: 561 CLPRRRQSLLFSATMPKELVLKREHTYI---DTVGLG-SVETPVKIKQSCL-VAPHELHF 615
LP+ RQ+LLFSAT E + K TY+ T+ + S T + Q VA + H
Sbjct: 262 LLPKERQTLLFSATFSPE-IKKLASTYLRNPQTIEVARSNSTNANVTQIVYDVAEGDKHS 320
Query: 616 QILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISE 675
++ LL++ L +VIVFC++ + S L L + ++ K QL R + +
Sbjct: 321 AVV-QLLRDRGL----KQVIVFCNSKIGASRLARNLERDGVVASAIHGDKSQLERMQALD 375
Query: 676 EFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLL 735
F+ + LV +DV+ARG+D ++ +V+ +P + E Y+HR+GRTGR G G+ + L
Sbjct: 376 AFKRGEIEALVATDVAARGLDIVELPAVINFDLPFNAEDYVHRIGRTGRAGATGDALSLC 435
Query: 736 APWEEYFLDDLKDL 749
+P E L D++ L
Sbjct: 436 SPNERKQLADIEKL 449
>gi|307198143|gb|EFN79171.1| Probable ATP-dependent RNA helicase DDX10 [Harpegnathos saltator]
Length = 738
Score = 205 bits (522), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 139/431 (32%), Positives = 233/431 (54%), Gaps = 26/431 (6%)
Query: 402 MTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLVPPIYVLIL 461
MT +Q ++ L+G D + AKTG+GK++AFL+P +E + T+L + VL++
Sbjct: 1 MTDIQRQSIGLALQGNDILGAAKTGSGKTLAFLVPILEILY---CKQWTKL-DGLGVLVI 56
Query: 462 CPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDH 521
PTRELA QI + + HD ++GG K + +R+ D +++ TPGRLL H
Sbjct: 57 TPTRELAYQIYDTLRKVGQYHD-FSTGLIIGGKDLKFEAKRM--DQYNVIICTPGRLLQH 113
Query: 522 IENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRRQSLLFSATMPKEL-- 579
++ + + +++LVLDEAD LD+GF K + I++ LP +RQ+LLFSAT K +
Sbjct: 114 MDENQLFNC--VNMQILVLDEADRCLDMGFEKTMNAIIENLPPKRQTLLFSATQTKSVKD 171
Query: 580 ---VLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILHHLLKEHILGTPDYKVIV 636
+ R+ YI + TP + QS +V E +L ++ H+ K+IV
Sbjct: 172 LARLSLRDPLYISAHEYSAHVTPESLHQSYIVCALEDKLAMLWSFIRNHL----KQKIIV 227
Query: 637 FCSTGMVTSLLYLLLREMK--MNVREMYSRKPQLYRDRISEEFRASKRLILVTSDVSARG 694
F S+ +Y ++ +++ +YS QL R I E FR + +L +D++ARG
Sbjct: 228 FFSSCKQVKYVYEAFCRLRPGISLLGLYSTLHQLRRMSIYETFRKKQHAVLFATDIAARG 287
Query: 695 MDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLAPWEEYFLDDLKD--LPLD 752
+D+P V V+Q+ P D YIHR+GRT R GE +L+L P EE ++ L+ +P++
Sbjct: 288 LDFPAVNWVIQMDCPEDVNAYIHRVGRTARFKSGGESLLVLLPSEEVMIEKLRQRKIPIN 347
Query: 753 KLQL-PHLNPEIQLQMDNHMAKIDNNVKEAAYHAWLGYYNSIREIGRDKTTLVELANK-- 809
+++ P+ Q +++ +A+ D ++KE A A++ Y SI + + + +K
Sbjct: 348 MIEINPNKLHSPQRKLEILLAR-DVSLKETAQRAFISYIKSIFLMKNKEIFNIHALDKDA 406
Query: 810 FAQSIGLQRPP 820
+A S+GL P
Sbjct: 407 YAASLGLVITP 417
>gi|85708371|ref|ZP_01039437.1| DNA and RNA helicase [Erythrobacter sp. NAP1]
gi|85689905|gb|EAQ29908.1| DNA and RNA helicase [Erythrobacter sp. NAP1]
Length = 484
Score = 205 bits (522), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 140/390 (35%), Positives = 210/390 (53%), Gaps = 25/390 (6%)
Query: 380 RFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIE 439
+F + G+S ++AL GY T +QE + LEG+D + A+TGTGK+ AF+LP+I+
Sbjct: 3 QFSDLGLSQPVLQALDLKGYSTPTPIQEQAIPPVLEGRDLLGIAQTGTGKTAAFMLPSID 62
Query: 440 AVLKATSSSTTQLVP--PIYVLILCPTRELASQIAAEAIALLKNHD---GIGVLTLVGGT 494
+ +A + +P +L+L PTREL SQIAA A K++ G+ V ++VGGT
Sbjct: 63 RLREADNR-----IPFKSCRMLVLAPTRELVSQIAASA----KDYGALAGLKVQSIVGGT 113
Query: 495 RFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKD 554
D+ +L IL+ATPGRLLD I+ K+ L +++LVLDEAD +LDLGF
Sbjct: 114 SVNKDRNKLHRG-TDILIATPGRLLDLIDQKA---FNLGSVEVLVLDEADQMLDLGFVHA 169
Query: 555 VENIVDCLPRRRQSLLFSATMPK---ELVLKREHTYIDTVGLGSVETPVKIKQSCLVAPH 611
+ I +P+ RQ+L FSATMPK ELV + + T +I Q +
Sbjct: 170 LRRISQLVPKERQTLFFSATMPKAIKELVSGYCNNPVQVSVTPESTTAERIDQYLFMVQQ 229
Query: 612 ELHFQILHHLLK-EHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYR 670
+ +L +L H + ++++F T + L + ++ K Q R
Sbjct: 230 DEKQSLLELILSGRHKVPGEFERILIFTRTKHGADRVVKKLSRAGIPANAIHGNKSQPQR 289
Query: 671 DRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGE 730
R +EFR K +ILV +DV+ARG+D P V+ V+ +P EQY+HR+GRT R GK+G
Sbjct: 290 QRALDEFRRGKTMILVATDVAARGIDIPGVSHVLNYELPNVPEQYVHRIGRTARAGKDGV 349
Query: 731 GVLLLAPWEEYFLDDLKDLP---LDKLQLP 757
+ A E +L D++ LD+L LP
Sbjct: 350 AIAFCAEDERAYLKDIRKTTGAELDRLNLP 379
>gi|299768643|ref|YP_003730669.1| putative ATP-dependent RNA helicase [Acinetobacter oleivorans DR1]
gi|298698731|gb|ADI89296.1| putative ATP-dependent RNA helicase [Acinetobacter oleivorans DR1]
Length = 644
Score = 205 bits (522), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 123/365 (33%), Positives = 197/365 (53%), Gaps = 19/365 (5%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
K F E + +AL G+ T VQE + A LEGKD +V ++TG+GK+ AFLLP +
Sbjct: 3 KTFAEFSLHETLQQALEGLGFTAPTPVQEQAIPAALEGKDLLVSSQTGSGKTAAFLLPTL 62
Query: 439 EAVLKATS----SSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGT 494
A+ + + V +L++ PTRELA Q++ +AIA +++ G+ + ++GG
Sbjct: 63 NALAGQETVVPFKDRMKAVTQPNILVISPTRELAQQVSQDAIAFVRHMKGVRIAAIMGGM 122
Query: 495 RFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKD 554
F ++L+ Q++VATPGRLLD + + ++L + L++DEAD +LDLGF +D
Sbjct: 123 PFAKQIQQLKG--AQVVVATPGRLLDLVNRRQ---IKLDQVDALIVDEADRMLDLGFSED 177
Query: 555 VENIVDCLPRRRQSLLFSATMPKELVLKREHTYIDTVGLGSVETPVKIKQSCLVAPH--- 611
+E I + R+Q+L+FSAT ++ D + + ++ET H
Sbjct: 178 LEAISELAANRKQTLMFSATFADRIIRLASCMMKDPMRI-AIETGHSTNTDITQTLHWTD 236
Query: 612 --ELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLY 669
E ++L H L + L + +VF ST T +L L E +V ++ PQ
Sbjct: 237 GFEHKKKLLTHWLSDENLD----QAVVFASTQEDTDMLAEELAEAGHSVVALHGAMPQTV 292
Query: 670 RDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEG 729
R+R R + ILV +DV+ARG+D P ++ V+ G+P E Y+HR+GRTGR G+ G
Sbjct: 293 RNRRLRSIREGRAKILVATDVAARGLDVPTISHVINFGLPMKHEDYVHRIGRTGRAGRTG 352
Query: 730 EGVLL 734
+ + L
Sbjct: 353 QAITL 357
>gi|291237232|ref|XP_002738539.1| PREDICTED: DEAD (Asp-Glu-Ala-Asp) box polypeptide 18-like
[Saccoglossus kowalevskii]
Length = 634
Score = 205 bits (522), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 156/467 (33%), Positives = 247/467 (52%), Gaps = 37/467 (7%)
Query: 375 ILSQKRFDECG--ISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIA 432
IL+ +F +S LT+K + G+ MT +Q ++ LEG+D + A+TG+GK++A
Sbjct: 135 ILTDSKFSSLADRVSELTLKGIVDMGFTHMTEIQSKSIPHLLEGRDLLAAAQTGSGKTLA 194
Query: 433 FLLPAIEAV--LKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTL 490
FL+P IE + LK + T V+I+ PTREL+ Q +LK H L +
Sbjct: 195 FLIPCIELLHKLKFMPRNGTG------VIIISPTRELSMQTYGVLREVLKYHYHTFGLIM 248
Query: 491 VGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLG 550
G R ++ + I+VATPGRLLDH++N + L+ LV+DEAD +L++G
Sbjct: 249 GGANR--AEESKKLGKGVNIVVATPGRLLDHLQNSPQFMYK--NLQCLVIDEADRILEVG 304
Query: 551 FRKDVENIVDCLPRRRQSLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQ 604
F ++++ I+ LP+RRQ++LFSAT K+ L LK + Y+ T ++Q
Sbjct: 305 FEEEMKQIMKLLPKRRQTMLFSATQTKKIENLARLSLKTQPVYVGVDDTKEKATVEGLEQ 364
Query: 605 SCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSR 664
+V E F +L LK++ KV+VF S+ M LL + + V ++ R
Sbjct: 365 GYVVCTSEKRFLLLFTFLKKN----RRKKVMVFFSSCMSVKYHCELLNYIDLPVMSIHGR 420
Query: 665 KPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGR 724
+ Q R + +F + IL+ +DV+ARG+D P V +VQ P D ++YIHR+GRT R
Sbjct: 421 QKQTKRTQTFFQFCNASEGILLCTDVAARGLDIPAVDWIVQYDPPDDPKEYIHRVGRTAR 480
Query: 725 EGKEGEG--VLLLAPWEEYFLDDLKD--LPLDKLQLP-HLNPEIQLQMDNHMAK--IDNN 777
G +G G +L+L P E FL LK+ +PL + + + IQ Q++ + K +
Sbjct: 481 -GIDGRGHALLILRPEELGFLRYLKNAKVPLSEFEFSWNKIANIQSQLERLIEKNYFLHK 539
Query: 778 VKEAAYHAWLGYYN--SIREIGRDKTTLVELANKFAQSIGLQRPPPL 822
+ AY +++ Y+ S++ I D TL K AQS G + PP +
Sbjct: 540 SSQEAYKSYVRAYDSHSLKHI-FDVNTLD--LQKAAQSFGFKVPPSV 583
>gi|68467745|ref|XP_722031.1| hypothetical protein CaO19.11444 [Candida albicans SC5314]
gi|46443978|gb|EAL03256.1| hypothetical protein CaO19.11444 [Candida albicans SC5314]
Length = 569
Score = 205 bits (522), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 151/429 (35%), Positives = 229/429 (53%), Gaps = 34/429 (7%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F+ S T+KA+ G+ +MT+VQ T+ L G+D + AKTG+GK++AFL+PAIE
Sbjct: 114 FENADFSEPTMKAIKEMGFTKMTKVQAKTIPPLLAGRDVLGAAKTGSGKTLAFLIPAIEL 173
Query: 441 V--LKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHD-GIGVLTLVGGTRFK 497
+ LK + T V+I+ PTRELA QI A L++ H G++ +GG +
Sbjct: 174 LYSLKIKPRNGTA------VIIITPTRELALQIFGVARELMQFHSQTCGIV--IGGADRR 225
Query: 498 VDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVEN 557
+ +L + +LVATPGRLLDH++N + LK LV+DEAD +L++GF +++
Sbjct: 226 QEATKL-AKGVNLLVATPGRLLDHLKNTQFV---FSNLKALVIDEADRILEIGFEDEMKQ 281
Query: 558 IVDCLPRR-RQSLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSCLVAP 610
I+ LP RQS+LFSAT + + L+ YI+ V V T ++Q +V
Sbjct: 282 IIKVLPNENRQSMLFSATQTTKVEDLARISLRPGPLYINVVPEKDVSTADGLEQGYVVCD 341
Query: 611 HELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYR 670
+ F +L LK ++ K+IVF S+ LL + + V +++ ++ Q R
Sbjct: 342 SDKRFLLLFSFLKRNV----KKKIIVFLSSCNSVKFYSELLNYIDLPVLDLHGKQKQQKR 397
Query: 671 DRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGE 730
EF +K+ ILV +DV+ARG+D P V +VQ P D YIHR+GRT R G +G+
Sbjct: 398 TNTFFEFCNAKQGILVCTDVAARGLDIPAVDWIVQFDPPDDPRDYIHRVGRTAR-GTQGK 456
Query: 731 G--VLLLAPWEEYFLDDLK--DLPLDKLQLPH---LNPEIQLQMDNHMAKIDNNVKEAAY 783
G ++ L P E FL LK +PL++ + P N + QL + N + Y
Sbjct: 457 GKSLMFLTPSELGFLRYLKAAKVPLNEYEFPANKIANIQSQLTKLIKTNYLLNQSAKDGY 516
Query: 784 HAWLGYYNS 792
A+L Y S
Sbjct: 517 RAYLQAYAS 525
>gi|325964224|ref|YP_004242130.1| DNA/RNA helicase [Arthrobacter phenanthrenivorans Sphe3]
gi|323470311|gb|ADX73996.1| DNA/RNA helicase, superfamily II [Arthrobacter phenanthrenivorans
Sphe3]
Length = 710
Score = 205 bits (521), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 139/398 (34%), Positives = 206/398 (51%), Gaps = 30/398 (7%)
Query: 371 EEEPILSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKS 430
EEE I +F + GI + AL GY + + +Q AT+ LEG+D V A+TGTGK+
Sbjct: 63 EEEGI----KFADLGIDGRVLAALQDVGYEKPSPIQAATIPLLLEGRDVVGLAQTGTGKT 118
Query: 431 IAFLLPAIEAVLKATS----SSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIG 486
AF +PA+ + + S TQ L+L PTRELA Q+A + K+ D
Sbjct: 119 AAFAVPALSRLAELHDLNGPSRKTQ------ALVLAPTRELALQVAEAFTSYAKHIDDFT 172
Query: 487 VLTLVGGTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHL 546
VL + GG+ + L Q++V TPGR++DHI S + L L+ LVLDEAD +
Sbjct: 173 VLPVYGGSAYGPQLAGLRRG-AQVVVGTPGRVIDHISKGS---LDLSELQYLVLDEADEM 228
Query: 547 LDLGFRKDVENIVDCLPRRRQSLLFSATMPKELVLKREHTYIDTVGLGSVETPVKIKQSC 606
L +GF +DVE I P RQ LFSATMP + + + Y++ E VK K +
Sbjct: 229 LRMGFAEDVEQIFQQTPSDRQVALFSATMPSQ-IRRMSKQYLNN----PAEISVKSKTTT 283
Query: 607 LVAPHELHFQIL--HHL-LKEHILGTPDYK-VIVFCSTGMVTSLLYLLLREMKMNVREMY 662
+ + Q++ H L IL ++ VI F T M T L L+ +
Sbjct: 284 GANTRQRYLQVMGPHKLDAMTRILEVEEFDGVIAFVRTKMATEDLADKLKSRGFQAAAIN 343
Query: 663 SRKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRT 722
PQ R+R + + + ILV +DV+ARG+D ++ V+ IP D E Y+HR+GRT
Sbjct: 344 GDIPQQQRERTVDALKEGRIDILVATDVAARGLDVERISHVINYDIPHDTESYVHRIGRT 403
Query: 723 GREGKEGEGVLLLAPWEEYFLDDLKDL---PLDKLQLP 757
GR G+ G+ +L + P E+Y L ++ P++++ LP
Sbjct: 404 GRAGRSGDAILFMTPREKYLLRSIEKATRQPVEQMHLP 441
>gi|358384758|gb|EHK22355.1| hypothetical protein TRIVIDRAFT_12133, partial [Trichoderma virens
Gv29-8]
Length = 651
Score = 205 bits (521), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 137/368 (37%), Positives = 205/368 (55%), Gaps = 32/368 (8%)
Query: 399 YIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSSTTQLVP---- 454
Y MT VQ ++ L+G D V +AKTGTGK++AFLLP ++ +++ + T+
Sbjct: 101 YDTMTPVQSKAINPALKGTDIVAQAKTGTGKTLAFLLPLLQRMIEEDPTLATRKASRNAR 160
Query: 455 --PIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLESDPCQILV 512
I ++L PTRELA QIA EA L + G+ V + VGGT+ R+ + C +LV
Sbjct: 161 SDDIRGIVLSPTRELAEQIATEAKRLCR-RTGLVVQSAVGGTQKSAMLRQTQRQGCHLLV 219
Query: 513 ATPGRLLDHIEN-KSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRR--RQSL 569
ATPGRL D +E+ SG+ L LVLDEAD +LD+GF K++ +I LP+ RQ++
Sbjct: 220 ATPGRLNDLLEDPNSGIDAP--KLAALVLDEADRMLDVGFEKELNSIQSYLPKDKVRQTI 277
Query: 570 LFSATMP-------KELVLKREHTYIDTVGLGSVETPVKIKQSCL-VAPHELHFQILHHL 621
L SAT+P +++V + ++ T+ T +I Q+ + V+ F L L
Sbjct: 278 LVSATIPDNVIQLARQMVRPHDFEFVQTIPEHETLTHDRIPQNVVTVSSWANVFPSLFEL 337
Query: 622 LKEHILGT------PDYKVIVFCSTGMVTSLLYLL------LREMKMNVREMYSRKPQLY 669
+ + P +K IV+ +T + L L ++++ + S+ Q
Sbjct: 338 VDREVAAAKQDPTLPPFKAIVYFNTTSMVELAGELGYQRRQSGQLRIPTFAIQSQLSQFQ 397
Query: 670 RDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEG 729
R + ++ FR SK IL +SDV+ARGMD+P+VT V+QV P +RE YIHRLGRTGR+ K G
Sbjct: 398 RTKAADMFRNSKTGILFSSDVTARGMDFPNVTHVIQVDAPRERESYIHRLGRTGRQNKSG 457
Query: 730 EGVLLLAP 737
EG L + P
Sbjct: 458 EGWLFVPP 465
>gi|421750235|ref|ZP_16187502.1| helicase, partial [Cupriavidus necator HPC(L)]
gi|409770743|gb|EKN53287.1| helicase, partial [Cupriavidus necator HPC(L)]
Length = 423
Score = 205 bits (521), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 128/372 (34%), Positives = 196/372 (52%), Gaps = 8/372 (2%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
FD G+ P ++AL+ GY + T +Q + L GKD + A+TGTGK+ F LP I+
Sbjct: 21 FDSFGLDPRVLRALSEQGYTKPTPIQAQAIPVVLLGKDVMGAAQTGTGKTAGFALPIIQR 80
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+L ++S + P+ L+L PTRELA Q+ + +A H + + GG
Sbjct: 81 LLPLANASASPARHPVRALMLTPTRELADQV-YDNVARYARHTDLRSTVVFGGVDMNPQT 139
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
L +ILVATPGRLLDH++ K SV L ++MLVLDEAD +LD+GF D++ I++
Sbjct: 140 DALRRG-VEILVATPGRLLDHVQQK---SVNLSQVQMLVLDEADRMLDMGFLPDLQRIIN 195
Query: 561 CLPRRRQSLLFSATMP---KELVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQI 617
LP +RQ+LLFSAT K+L H + S ++Q+ +
Sbjct: 196 LLPAKRQTLLFSATFSPEIKKLAASYLHQPVTIEVARSNSANENVRQTVYQVQDGQKQEA 255
Query: 618 LHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEF 677
+ HLLK+ + IVF ++ + S L L +N ++ K Q R + E F
Sbjct: 256 VVHLLKQRADQGLSRQCIVFVNSKIGCSRLARHLEREGINAAAIHGDKTQTERMQTLEGF 315
Query: 678 RASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLAP 737
+ LV +DV+ARG+D D+ V+ +P + E Y+HR+GRTGR G G+ + + P
Sbjct: 316 KQGTIDALVATDVAARGLDIADMPCVINFDLPFNAEDYVHRIGRTGRAGATGDALSIFVP 375
Query: 738 WEEYFLDDLKDL 749
+E L D++ +
Sbjct: 376 GDERLLADIEKM 387
>gi|398412610|ref|XP_003857625.1| ATP-dependent RNA helicase HAS1 [Zymoseptoria tritici IPO323]
gi|339477510|gb|EGP92601.1| hypothetical protein MYCGRDRAFT_65342 [Zymoseptoria tritici IPO323]
Length = 638
Score = 205 bits (521), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 142/430 (33%), Positives = 231/430 (53%), Gaps = 31/430 (7%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
++F E +S T+KA+ + MT +Q + L G+D + AKTG+GK++AFL+PAI
Sbjct: 162 QKFTELNLSERTMKAINGMPFDTMTEIQRRGIPPLLAGRDVLGAAKTGSGKTLAFLIPAI 221
Query: 439 EAV--LKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNH-DGIGVLTLVGGTR 495
E + L+ + T V+++ PTRELA QI A L++NH G++ +GG
Sbjct: 222 EMLYSLRFKPRNGTG------VIVVSPTRELALQIFGVARELMENHTQTYGIV--IGGAN 273
Query: 496 FKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDV 555
+ + +L + +L+ATPGRLLDH++N G + +K LV+DEAD +L++GF ++
Sbjct: 274 RRAEAEKL-AKGVNLLIATPGRLLDHLQNTQGFVFK--NVKALVIDEADRILEVGFEDEM 330
Query: 556 ENIVDCLPRR-RQSLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSCLV 608
IV LP+ RQ++LFSAT + + L+ YI+ T ++Q ++
Sbjct: 331 RQIVKILPKEDRQTMLFSATQTTKVEDLARISLRPGPLYINVDNEEEHSTVSGLEQGYVI 390
Query: 609 APHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQL 668
++ F++L LK H P K+IVF S+ + LL + + V ++ ++ Q
Sbjct: 391 CEADMRFRLLFTFLKRH----PQKKIIVFFSSCNCVNYYSELLNYIDLPVLGLHGKQKQQ 446
Query: 669 YRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGR-EGK 727
R EF +K+ L+ +DV+ARG+D P V +VQ P D YIHR+GRT R
Sbjct: 447 KRTNTFFEFCNAKQGTLICTDVAARGLDIPAVDWIVQFDPPDDPRDYIHRVGRTARGANA 506
Query: 728 EGEGVLLLAPWEEYFLDDLKD--LPLDKLQLPH---LNPEIQLQMDNHMAKIDNNVKEAA 782
+G+ ++ L P E FL+ LK+ +PL + ++P L+ + QL+M N +
Sbjct: 507 KGKSLMFLQPNEVGFLNHLKEAKVPLVEFEIPPKKILDIQSQLEMLIGKNYYLNKSAKDG 566
Query: 783 YHAWLGYYNS 792
Y ++L Y S
Sbjct: 567 YRSYLQAYAS 576
>gi|386720987|ref|YP_006187312.1| DEAD/DEAH box helicase [Paenibacillus mucilaginosus K02]
gi|384088111|gb|AFH59547.1| DEAD/DEAH box helicase domain-containing protein [Paenibacillus
mucilaginosus K02]
Length = 425
Score = 205 bits (521), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 138/377 (36%), Positives = 203/377 (53%), Gaps = 24/377 (6%)
Query: 376 LSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLL 435
+ + F GIS +AL GY + T +Q + + L G D + +A+TGTGK++AF+L
Sbjct: 1 MKKNEFQALGISQELAEALHKHGYHEPTPIQREAIPSVLGGHDVIAQAQTGTGKTLAFVL 60
Query: 436 PAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTR 495
P +E++ S + LI+ PTRELA QI E +A GI VL+ GG
Sbjct: 61 PILESIDPNRSH--------VQALIVTPTRELAIQITEE-VARWAPLKGIRVLSAYGGQD 111
Query: 496 FKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDV 555
+ R+LE I+VATPGRLLDH+ ++ V+L L LVLDEAD +L +GF +V
Sbjct: 112 VERQIRKLEG-AIHIIVATPGRLLDHLRRET---VQLFKLSTLVLDEADQMLHMGFLPEV 167
Query: 556 ENIVDCLPRRRQSLLFSATMPKELVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHF 615
I+ P RRQ+LLFSATMP E V + Y+ VE VK K+ L ++
Sbjct: 168 VEIISATPTRRQTLLFSATMP-ERVRQLAKEYMKP----PVEIEVKAKRVTLDEIEQIVV 222
Query: 616 QI-----LHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYR 670
Q L L K + P + ++FC T + + L L E V E++ Q R
Sbjct: 223 QTSDRGKLDALCKA-MEEDPPFLGMIFCRTKLRATKLRDELDERGYAVDELHGDLTQAKR 281
Query: 671 DRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGE 730
+++ + FR +K LV +D++ARG+D +T V IP D E YIHR+GRTGR G+ G+
Sbjct: 282 EQVMKRFRDAKIQFLVATDIAARGLDVEGITHVYNYDIPHDAESYIHRIGRTGRAGQTGK 341
Query: 731 GVLLLAPWEEYFLDDLK 747
+ AP + ++L+ ++
Sbjct: 342 AITFTAPRDAFYLEAIE 358
>gi|367033377|ref|XP_003665971.1| hypothetical protein MYCTH_2310255 [Myceliophthora thermophila ATCC
42464]
gi|347013243|gb|AEO60726.1| hypothetical protein MYCTH_2310255 [Myceliophthora thermophila ATCC
42464]
Length = 830
Score = 205 bits (521), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 152/462 (32%), Positives = 242/462 (52%), Gaps = 34/462 (7%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F + + T L A+ + +T +Q A + L+G D + AKTG+GK++AFL+P +E
Sbjct: 54 FTDLPLCEATATGLRASHFEVLTDIQRAAIPLALKGNDILGAAKTGSGKTLAFLVPVLEK 113
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+ A + L LI+ PTRELA QI + +NH L ++GG K +
Sbjct: 114 LYHAKWTEYDGL----GALIISPTRELAIQIFEVLRKIGRNHYFSAGL-VIGGKSLKEEA 168
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
RL ILV TPGR+L H++ + V L++LVLDEAD ++D+GF+ V+ +V+
Sbjct: 169 ERLGR--MNILVCTPGRMLQHLDQTANFDVN--NLQILVLDEADRIMDMGFQSAVDALVE 224
Query: 561 CLPRRRQSLLFSATMPKEL-----VLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHF 615
LP+ RQ+LLFSAT K + + ++ Y+ TP ++QS +V P
Sbjct: 225 HLPKTRQTLLFSATQSKRVSDLARLSLKDPEYVSAHEAAPTATPTTLQQSYVVTPLAEKL 284
Query: 616 QILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK--MNVREMYSRKPQLYRDRI 673
L L+ ++ K+IVF S+G ++ + M+ + + ++ R+ Q+ R I
Sbjct: 285 DTLWGFLRSNL----KSKIIVFLSSGKQVRFVFESFKRMQPGIPLLHLHGRQKQVARMEI 340
Query: 674 SEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVL 733
+ F ++K L +DV ARG+D+P V V+QV P D E YIHR+GRT R +G VL
Sbjct: 341 TSRFSSAKYACLFATDVVARGVDFPAVDWVIQVDCPEDAETYIHRVGRTARYQSKGRAVL 400
Query: 734 LLAPWEEY-FLDDL--KDLPLDKLQL---PHLNPEIQLQMDNHMAKIDNNVKEAAYHAWL 787
L P EE FL L K +P+ K+ + + + +LQ +N + ++K A++
Sbjct: 401 FLDPSEEEGFLKRLEHKKVPIQKVNVRASKKKSIKNELQSNNFQSA---DLKYLGQKAFI 457
Query: 788 GYYNSIREIGRDKTTLV--EL-ANKFAQSIGLQRPPPL-FRK 825
Y SI + +DK EL + +A+S+GL P + F+K
Sbjct: 458 SYVRSIY-LQKDKEVFKFDELDLDGYAESLGLPGTPQIKFQK 498
>gi|254293945|ref|YP_003059968.1| DEAD/DEAH box helicase [Hirschia baltica ATCC 49814]
gi|254042476|gb|ACT59271.1| DEAD/DEAH box helicase domain protein [Hirschia baltica ATCC 49814]
Length = 478
Score = 205 bits (521), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 128/368 (34%), Positives = 193/368 (52%), Gaps = 16/368 (4%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
FD+ + P + A+ GY + T +Q + A ++G+D A+TGTGK+ AF+LP I
Sbjct: 3 FDDLDLDPRVLSAVKETGYTEPTPIQAQAIPAIIQGRDVTGIAQTGTGKTAAFVLPMIHK 62
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+ + + + LIL PTRELA+Q+A NH + + L+GG F DQ
Sbjct: 63 LGQGRAKARMP-----RTLILEPTRELAAQVADNFEKYGVNHK-LNMALLIGGVSF-ADQ 115
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
+ + +L+ATPGRL+DH E L + G++MLV+DEAD +LD+GF D+E I
Sbjct: 116 DKKLTAGVDVLIATPGRLMDHFERGRLL---MTGVQMLVIDEADRMLDMGFIPDIEKICK 172
Query: 561 CLPRRRQSLLFSATMPKELVLKREHTYIDTVGLGSVETPVK----IKQSCLVAPHELHFQ 616
LP RRQ+LLFSATMP E+ + D + V P + I Q +P + +
Sbjct: 173 LLPPRRQTLLFSATMPPEIAKLTKQFQNDPKQI-EVARPAQTAELITQHVTKSPSDKD-E 230
Query: 617 ILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEE 676
I +L+ I IVFC+ ++ L + ++ Q YR E+
Sbjct: 231 IKRGILRAIIASCEVKNGIVFCNRKREVDIVAKSLNAHGFDAAPIHGDLSQSYRMETLEK 290
Query: 677 FRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLA 736
F+ +LV SDV+ARG+D PDV V PP+ + Y+HR+GRTGR G+ GE +++
Sbjct: 291 FKNGDLTLLVASDVAARGLDIPDVGHVFNYAPPPNSDDYVHRIGRTGRAGRTGESYTIVS 350
Query: 737 PWEEYFLD 744
P ++ D
Sbjct: 351 PRDQKLWD 358
>gi|346313585|ref|ZP_08855112.1| hypothetical protein HMPREF9022_00769 [Erysipelotrichaceae
bacterium 2_2_44A]
gi|345907440|gb|EGX77150.1| hypothetical protein HMPREF9022_00769 [Erysipelotrichaceae
bacterium 2_2_44A]
Length = 583
Score = 205 bits (521), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 125/361 (34%), Positives = 197/361 (54%), Gaps = 21/361 (5%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F+E IS +KA+ GY T +Q ++ +EGKD + ++ TGTGK+ AF +PAIE
Sbjct: 4 FNELQISSEVMKAVEEMGYENATDIQAQSIPLIMEGKDVLGRSNTGTGKTAAFGIPAIEK 63
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
V + T LI+CPTREL +Q+A E K +G+ ++ + GG Q
Sbjct: 64 VCQGTRYPNA--------LIICPTRELVTQVATELRKFSKYKEGVKIVPIYGGQPID-RQ 114
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
+L C I+V TPGR++DH+ ++ ++L M++LDEAD +L++GF++D+E I+
Sbjct: 115 IQLLKRGCGIVVGTPGRIMDHLNRRT---LKLDNTNMVILDEADEMLNMGFKEDIEEILS 171
Query: 561 CLPR--RRQSLLFSATMPKELVLKREHTYIDTVGL---GSVETPVKIKQSCLVAPHELHF 615
+P Q++LFSAT P E++ + D V + + T ++Q AP
Sbjct: 172 MMPEGNEHQTILFSATWPAEILRITKEFQNDPVRVEIKSAQRTIDTVEQIYYDAPRGKKA 231
Query: 616 QILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISE 675
L LL + PD ++FC+T + L L + + ++ Q +R R+ E
Sbjct: 232 NALRVLLSHY---DPDL-CMIFCNTKKMVDELCDELNKHNIKAISLHGDMKQEFRSRVME 287
Query: 676 EFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLL 735
+FR+ IL+ +DV+ARG+D D+ VV IP D E YIHR+GRTGR GK+G + L+
Sbjct: 288 QFRSGNYPILIATDVAARGIDVDDIDLVVNFDIPQDNEYYIHRVGRTGRAGKKGLAITLV 347
Query: 736 A 736
+
Sbjct: 348 S 348
>gi|340786226|ref|YP_004751691.1| ATP-dependent RNA helicase [Collimonas fungivorans Ter331]
gi|340551493|gb|AEK60868.1| ATP-dependent RNA helicase [Collimonas fungivorans Ter331]
Length = 506
Score = 205 bits (521), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 128/384 (33%), Positives = 206/384 (53%), Gaps = 22/384 (5%)
Query: 374 PILSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAF 433
P RF + G+SP ++AL GY+ T +Q + L+G+D + A+TGTGK+ F
Sbjct: 23 PTTPTVRFADFGLSPDILRALNDQGYVHPTPIQAEAIPVVLQGRDVMGAAQTGTGKTAGF 82
Query: 434 LLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGG 493
LP I+ +L ++S + P+ LIL PTRELA Q+ AE + H + + GG
Sbjct: 83 SLPIIQLLLAHANTSASPARHPVRALILTPTRELADQV-AENVKAYCRHTPLRSTVVFGG 141
Query: 494 TRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRK 553
L S +I++ATPGRLLDH++ K ++ L ++LV+DEAD +LD+GF
Sbjct: 142 VDIAPQTAALRSG-IEIVIATPGRLLDHVQQK---TLNLSQTQILVMDEADRMLDMGFLP 197
Query: 554 DVENIVDCLPRRRQSLLFSATMPKELVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHEL 613
D++ I++ LP+ RQ+L+FSAT E + K T++ + PV I+ + A +
Sbjct: 198 DLQRIINLLPKERQNLMFSATFSGE-IKKLAATFL--------KNPVTIEVARSNATADN 248
Query: 614 HFQILHHLLKEHILGTPDY--------KVIVFCSTGMVTSLLYLLLREMKMNVREMYSRK 665
Q ++H+ ++ Y +VIVF +T + S L L +N ++ K
Sbjct: 249 VTQTMYHVNEQTKAEAVSYIIRERNLKQVIVFSNTKIGASKLARHLENEGVNASAIHGDK 308
Query: 666 PQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGRE 725
Q R E F+ + +LV +DV+ARG+D ++ V+ +P + E Y+HR+GRTGR
Sbjct: 309 TQNERMAALEAFKRGEIEVLVATDVAARGLDIAELPCVINFDLPYNAEDYVHRIGRTGRA 368
Query: 726 GKEGEGVLLLAPWEEYFLDDLKDL 749
G G+ + L A +E L D++ +
Sbjct: 369 GASGDAISLYADKDERLLVDIEKM 392
>gi|373852215|ref|ZP_09595015.1| DEAD/DEAH box helicase domain protein [Opitutaceae bacterium TAV5]
gi|372474444|gb|EHP34454.1| DEAD/DEAH box helicase domain protein [Opitutaceae bacterium TAV5]
Length = 602
Score = 205 bits (521), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 132/381 (34%), Positives = 205/381 (53%), Gaps = 33/381 (8%)
Query: 376 LSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLL 435
+ ++F E G+SP +KA+ G+ + + +Q A + L G+D V ++ TG+GK+ AF L
Sbjct: 1 MESRKFAELGLSPELLKAVDKMGFEEASPIQAAVIPLLLAGRDVVGQSSTGSGKTAAFAL 60
Query: 436 PAIEAV---LKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVG 492
PAIE V LKA + VLILCPTRELA Q+A E L GI + + G
Sbjct: 61 PAIERVDPKLKA-----------VQVLILCPTRELAVQVAEEVGKLAFFKRGIIEVPVYG 109
Query: 493 GTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFR 552
G ++ R L + QI++ TPGR++DH+E + ++L LKM++LDE D +LD+GFR
Sbjct: 110 GQSYERQFRALAAG-AQIVIGTPGRVMDHMERGT---LKLDRLKMVILDECDRMLDMGFR 165
Query: 553 KDVENIVDCLPRRRQSLLFSATMPKEL--VLKREHTYIDTVGLGSVET----PVKIKQSC 606
D+E+I+ +P +RQSL FSATMP+E+ ++ R +I +E ++ Q
Sbjct: 166 DDIEHILKAMPAQRQSLFFSATMPREIRDMISR---FIPDPAWIKIEAKEQNAPQVDQVY 222
Query: 607 LVAPHELHFQILHHLLKEHILGTPDYKV-IVFCSTGMVTSLLYLLLREMKMNVREMYSRK 665
++L L+ H D++ IVFCST ++ L L ++
Sbjct: 223 FEVDRRSKIEVLTRLIDLH-----DFRYGIVFCSTKIMVDELDEHLHARGYACDRLHGDI 277
Query: 666 PQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGRE 725
Q R R E+F+ L+ +DV+ARG+D D+ V +P D E Y HR+GRTGR
Sbjct: 278 TQAQRTRTMEKFKRRGFEFLIATDVAARGLDVDDLEVVFNFDLPNDAEDYTHRIGRTGRA 337
Query: 726 GKEGEGVLLLAPWEEYFLDDL 746
G++G+ ++ E + L +
Sbjct: 338 GRKGKAFTFVSGRELWKLQSM 358
>gi|337744819|ref|YP_004638981.1| DEAD/DEAH box helicase [Paenibacillus mucilaginosus KNP414]
gi|336296008|gb|AEI39111.1| DEAD/DEAH box helicase domain-containing protein [Paenibacillus
mucilaginosus KNP414]
Length = 425
Score = 205 bits (521), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 138/377 (36%), Positives = 203/377 (53%), Gaps = 24/377 (6%)
Query: 376 LSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLL 435
+ + F GIS +AL GY + T +Q + + L G D + +A+TGTGK++AF+L
Sbjct: 1 MKKNEFQALGISQELAEALHKHGYHEPTPIQREAIPSVLGGHDVIAQAQTGTGKTLAFVL 60
Query: 436 PAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTR 495
P +E++ S + LI+ PTRELA QI E +A GI VL+ GG
Sbjct: 61 PILESIDPNRSH--------VQALIVTPTRELAIQITEE-VARWAPLKGIRVLSAYGGQD 111
Query: 496 FKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDV 555
+ R+LE I+VATPGRLLDH+ ++ V+L L LVLDEAD +L +GF +V
Sbjct: 112 VERQIRKLEG-AIHIIVATPGRLLDHLRRET---VQLFKLSTLVLDEADQMLHMGFLPEV 167
Query: 556 ENIVDCLPRRRQSLLFSATMPKELVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHF 615
I+ P RRQ+LLFSATMP E V + Y+ VE VK K+ L ++
Sbjct: 168 VEIISATPTRRQTLLFSATMP-ERVRQLAKEYMKP----PVEIEVKAKRVTLDEIEQIVV 222
Query: 616 QI-----LHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYR 670
Q L L K + P + ++FC T + + L L E V E++ Q R
Sbjct: 223 QTTDRGKLDALCKA-MEEDPPFLGMIFCRTKLRATKLRDELDERGYAVDELHGDLTQAKR 281
Query: 671 DRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGE 730
+++ + FR +K LV +D++ARG+D +T V IP D E YIHR+GRTGR G+ G+
Sbjct: 282 EQVMKRFRDAKIQFLVATDIAARGLDVEGITHVYNYDIPHDAESYIHRIGRTGRAGQTGK 341
Query: 731 GVLLLAPWEEYFLDDLK 747
+ AP + ++L+ ++
Sbjct: 342 AITFTAPRDAFYLEAIE 358
>gi|344939864|ref|ZP_08779152.1| DEAD/DEAH box helicase domain protein [Methylobacter tundripaludum
SV96]
gi|344261056|gb|EGW21327.1| DEAD/DEAH box helicase domain protein [Methylobacter tundripaludum
SV96]
Length = 441
Score = 205 bits (521), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 130/387 (33%), Positives = 216/387 (55%), Gaps = 26/387 (6%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F + G++ +KA+ GY+ T VQ+ + LEGKD + A+TGTGK+ +F LP ++
Sbjct: 3 FAQLGLADELLKAVADQGYVTPTPVQQKAIPLILEGKDVLAGAQTGTGKTASFTLPLLQR 62
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+ A + Q + LIL PTRELA+Q+ E++ H +VGG +
Sbjct: 63 L--AENHDPHQKPRRVRALILVPTRELAAQVY-ESVKTYGAHLPFHAEAVVGGASIGIQT 119
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
R+L C I+VATPGRL+DH++ ++ + L +++LVLDEAD +LD+GF D++ ++
Sbjct: 120 RQLRRG-CDIVVATPGRLIDHVQQRN---INLSNVEVLVLDEADRMLDMGFLPDIKQLMA 175
Query: 561 CLPRRRQSLLFSATMPKELVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQILHH 620
+P++RQSLLFSAT+P I ++ + PV+++ + A E + ++
Sbjct: 176 LIPKKRQSLLFSATVPNA---------IKSLAAQLLNNPVEVEVAKQNATAENVAERVYG 226
Query: 621 LLKEH-------ILGTPDYK-VIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDR 672
+ +E+ ++G+ ++K V+VF T L L E + ++ K Q R++
Sbjct: 227 IGREYKRELLSYLIGSNNWKQVLVFVRTKHGADRLEKQLIEDGIRTAALHGDKTQGARNK 286
Query: 673 ISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGV 732
E+F+ K +LV +D++ARG+D D+ VV +P E YIHR+GRTGR G GE +
Sbjct: 287 ALEQFKTGKVSVLVATDIAARGLDIDDLPHVVNFDVPQVPEDYIHRIGRTGRAGANGEAL 346
Query: 733 LLLAPWEEYFLDDLKDLPLDKLQLPHL 759
L+ P E + L +++ L K Q+P +
Sbjct: 347 SLVCPEEAWMLVEIEKLL--KRQIPRV 371
>gi|116073020|ref|ZP_01470282.1| putative ATP-dependent RNA helicase [Synechococcus sp. RS9916]
gi|116068325|gb|EAU74077.1| putative ATP-dependent RNA helicase [Synechococcus sp. RS9916]
Length = 599
Score = 205 bits (521), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 131/371 (35%), Positives = 196/371 (52%), Gaps = 21/371 (5%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F G S +K LT GY + + +Q A + G+D V +A+TGTGK+ AF LP +E
Sbjct: 45 FAGFGFSEALVKTLTEKGYKEPSPIQAAAFPELMLGRDLVGQAQTGTGKTAAFALPLLER 104
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+ K + L+L PTRELA Q+A A H + VL + GG+ F+
Sbjct: 105 LQKDATKPQA--------LVLAPTRELAMQVAESFKAYSAGHPHLNVLAIYGGSDFRSQI 156
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
L+ ++V TPGR++DH+ + + GL+ LVLDEAD +L +GF DVE I+D
Sbjct: 157 HALKRG-VDVVVGTPGRVMDHMRQGT---LDTTGLRSLVLDEADEMLRMGFIDDVEWILD 212
Query: 561 CLPRRRQSLLFSATMPKELVLKREHTYIDTVGLGSVETPVK----IKQSCLVAPHELHFQ 616
LP RQ +LFSATMP E + + Y+ +++T K I+Q C+ + +
Sbjct: 213 QLPEERQVVLFSATMPSE-IRRLSKRYLREPAEITIKTKEKEARRIRQRCITLQNSHKLE 271
Query: 617 ILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEE 676
L+ +L E + G VI+F T +T + L +V + PQ R+R E
Sbjct: 272 ALNRVL-EAVTGE---GVIIFARTKAITLNVSESLEAAGHDVAVLNGDVPQNQRERTVER 327
Query: 677 FRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLA 736
R ILV +DV+ARG+D + V+ +P D E Y+HR+GRTGR G+ GE +L +
Sbjct: 328 LRKGTVNILVATDVAARGLDVDRIGLVINYDMPFDSEAYVHRIGRTGRAGRSGEAILFVT 387
Query: 737 PWEEYFLDDLK 747
P E F+++L+
Sbjct: 388 PRERRFVNNLE 398
>gi|350610602|pdb|3SQW|A Chain A, Structure Of Mss116p (Nte Deletion) Bound To Ssrna And
Amp-Pnp
Length = 579
Score = 205 bits (521), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 151/476 (31%), Positives = 246/476 (51%), Gaps = 39/476 (8%)
Query: 392 KALTAAGYIQMTRVQEATLSACL--EGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSST 449
KA+T + +T VQ+ T+ L E D + +AKTGTGK+ AFL+P + ++ S
Sbjct: 34 KAITRMEFPGLTPVQQKTIKPILSSEDHDVIARAKTGTGKTFAFLIPIFQHLINTKFDSQ 93
Query: 450 TQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGI---GVLTLVGGTRFKVDQRRLESD 506
+ +I+ PTR+LA QI AE + + G+ ++LVGGT F+ ++
Sbjct: 94 YM----VKAVIVAPTRDLALQIEAEVKKIHDMNYGLKKYACVSLVGGTDFRAAMNKMNKL 149
Query: 507 PCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRR 566
I++ATPGRL+D +E S R + K VLDEAD LL++GFR D+E I L +
Sbjct: 150 RPNIVIATPGRLIDVLEKYSNKFFRFVDYK--VLDEADRLLEIGFRDDLETISGILNEKN 207
Query: 567 -------QSLLFSATM-------PKELVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHE 612
++LLFSAT+ ++ K+E ++DTV E +I QS +++
Sbjct: 208 SKSADNIKTLLFSATLDDKVQKLANNIMNKKECLFLDTVDKNEPEAHERIDQSVVISEKF 267
Query: 613 LH--FQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLR-EMK--MNVREMYSRKPQ 667
+ F + H+ K+ +YK I+F T TS L +L+ E K + + E + + Q
Sbjct: 268 ANSIFAAVEHIKKQIKERDSNYKAIIFAPTVKFTSFLCSILKNEFKKDLPILEFHGKITQ 327
Query: 668 LYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGK 727
R + + F+ + ILV +DV ARGMD+P+V V+Q+G+P + YIHR+GRT R GK
Sbjct: 328 NKRTSLVKRFKKDESGILVCTDVGARGMDFPNVHEVLQIGVPSELANYIHRIGRTARSGK 387
Query: 728 EGEGVLLLAPWEEYF---LDDLKDLPLDKLQLPHLNPEIQLQMDNHMAKIDNNVKEAAYH 784
EG VL + E F L+D K++ + K + + EI+ ++ + + ++ +
Sbjct: 388 EGSSVLFICKDELPFVRELEDAKNIVIAKQEKYEPSEEIKSEVLEAVTEEPEDISDIVIS 447
Query: 785 AWLGYYNSIREI-GRDKTTLVELANKFAQSIGLQRPP---PLFRKTALKMGLKDIP 836
Y + I+E ++ L E+A+ + + L P P+ R+ K+GL P
Sbjct: 448 LISSYRSCIKEYRFSERRILPEIASTYG--VLLNDPQLKIPVSRRFLDKLGLSRSP 501
>gi|429852313|gb|ELA27456.1| ATP-dependent rRNA helicase rrp3 [Colletotrichum gloeosporioides
Nara gc5]
Length = 476
Score = 205 bits (521), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 134/374 (35%), Positives = 202/374 (54%), Gaps = 25/374 (6%)
Query: 377 SQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLP 436
S K F + GI ++A GY T +Q ++ L+ +D + A+TG+GK+ AF LP
Sbjct: 51 SAKTFKDLGIVDSLVEACDRLGYTNPTPIQAQSIPHALQNRDVIGLAETGSGKTAAFALP 110
Query: 437 AIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAA--EAIALLKNHDGIGVLTLVGGT 494
I+A+L S ++ L+L PTRELA+QIAA EA+ L N + V +VGG
Sbjct: 111 IIQALLDKPSH--------LFGLVLAPTRELAAQIAASFEALGSLVN---LRVAVIVGGL 159
Query: 495 RFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKD 554
L P I+VATPGRL+DH+E G S+R LK LV+DEAD LLD+ F
Sbjct: 160 DMVAQAIALGKKP-HIVVATPGRLVDHLEKTKGFSLR--SLKYLVMDEADRLLDMDFGPS 216
Query: 555 VENIVDCLPRRRQSLLFSATMPKELVLKREHTYIDTVGLG----SVETPVKIKQSCLVAP 610
++ I+ +PR R++ LFSATM ++ + + D V + S +T + Q+ + P
Sbjct: 217 IDKILKFIPRERRTFLFSATMSSKIESLQRASLRDPVRISISSSSHQTVSTLIQNYIFCP 276
Query: 611 HELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYR 670
H L +L+ E+ K+++F T T L +LLR + ++ + Q R
Sbjct: 277 HNKKDTYLVYLVNEY----SGKKIVLFTRTVTETQRLAILLRTLGFGAIPIHGQLNQTAR 332
Query: 671 DRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGE 730
+FRA R ILV +DV+ARG+D P V V+ IP D + Y+HR+GRT R GK G+
Sbjct: 333 LGALNKFRAGSRDILVATDVAARGLDIPLVDVVINFDIPSDSKTYVHRVGRTARAGKSGK 392
Query: 731 GVLLLAPWE-EYFL 743
+ ++ ++ E +L
Sbjct: 393 AITIMTQYDLEIYL 406
>gi|398835789|ref|ZP_10593146.1| DNA/RNA helicase, superfamily II [Herbaspirillum sp. YR522]
gi|398215227|gb|EJN01792.1| DNA/RNA helicase, superfamily II [Herbaspirillum sp. YR522]
Length = 487
Score = 205 bits (521), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 124/373 (33%), Positives = 201/373 (53%), Gaps = 12/373 (3%)
Query: 380 RFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIE 439
RF++ G+SP ++ALT GY+ T +Q + L+G+D + A+TGTGK+ F LP I+
Sbjct: 17 RFEDFGLSPDILRALTEQGYVHPTPIQAQAIPVVLQGRDVMGAAQTGTGKTAGFSLPIIQ 76
Query: 440 AVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVD 499
+L S+S + P+ LIL PTRELA Q+ A+ + + + GG
Sbjct: 77 LLLAHASTSASPARHPVRALILTPTRELADQV-ADNVKAYSRFTPLRSTVVFGGVDMAPQ 135
Query: 500 QRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIV 559
L + +I++ATPGRLLDH++ K +V L ++LV+DEAD +LD+GF D++ I+
Sbjct: 136 TATLRAG-VEIVIATPGRLLDHVQQK---TVNLSQTQILVMDEADRMLDMGFLPDLQRII 191
Query: 560 DCLPRRRQSLLFSATMP---KELVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQ 616
+ LP++RQ+L+FSAT K+L ++ + S T ++ Q+
Sbjct: 192 NLLPKKRQNLMFSATFSPEIKKLAGSFQNNPVTIEVARSNATAERVTQTIYRVDESAKAD 251
Query: 617 ILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEE 676
+ +++E L +VIVF +T + S L L + ++ K Q R E
Sbjct: 252 AVSFIIRERNL----KQVIVFSNTKIGASRLSRQLENEGVKASAIHGDKTQNERMAALEA 307
Query: 677 FRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLA 736
F+ + +LV +DV+ARG+D D+ V+ +P + E Y+HR+GRTGR G G+ + L
Sbjct: 308 FKQGQIEVLVATDVAARGLDITDLPCVINYDMPYNAEDYVHRIGRTGRAGASGDAISLFC 367
Query: 737 PWEEYFLDDLKDL 749
+E L D++ L
Sbjct: 368 DKDERLLTDIEKL 380
>gi|391229975|ref|ZP_10266181.1| DNA/RNA helicase, superfamily II [Opitutaceae bacterium TAV1]
gi|391219636|gb|EIP98056.1| DNA/RNA helicase, superfamily II [Opitutaceae bacterium TAV1]
Length = 602
Score = 205 bits (521), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 131/381 (34%), Positives = 205/381 (53%), Gaps = 33/381 (8%)
Query: 376 LSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLL 435
+ ++F E G+SP +KA+ G+ + + +Q A + L G+D V ++ TG+GK+ AF L
Sbjct: 1 MESRKFAELGLSPELLKAVDKMGFEEASPIQAAVIPLLLAGRDVVGQSSTGSGKTAAFAL 60
Query: 436 PAIEAV---LKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVG 492
PAIE V LKA + VLILCPTRELA Q+A E L GI + + G
Sbjct: 61 PAIERVDPKLKA-----------VQVLILCPTRELAVQVAEEVGKLAFFKRGIIEVPVYG 109
Query: 493 GTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFR 552
G ++ R L + QI++ TPGR++DH+E + ++L L+M++LDE D +LD+GFR
Sbjct: 110 GQSYERQFRALAAG-AQIVIGTPGRVMDHMERST---LKLDQLRMVILDECDRMLDMGFR 165
Query: 553 KDVENIVDCLPRRRQSLLFSATMPKEL--VLKREHTYIDTVGLGSVET----PVKIKQSC 606
D+E+I+ +P +RQSL FSATMP+E+ ++ R +I +E ++ Q
Sbjct: 166 DDIEHILKAMPAQRQSLFFSATMPREIRDMISR---FIPDPAWIKIEAREQNAPQVDQVY 222
Query: 607 LVAPHELHFQILHHLLKEHILGTPDYKV-IVFCSTGMVTSLLYLLLREMKMNVREMYSRK 665
++L L+ H D++ IVFCST ++ L L ++
Sbjct: 223 FEVDRRSKIEVLTRLIDLH-----DFRYGIVFCSTKIMVDELDEHLHARGYACDRLHGDI 277
Query: 666 PQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGRE 725
Q R R E+F+ L+ +DV+ARG+D D+ V +P D E Y HR+GRTGR
Sbjct: 278 TQAQRTRTMEKFKRRGFEFLIATDVAARGLDVDDLEVVFNFDLPNDAEDYTHRIGRTGRA 337
Query: 726 GKEGEGVLLLAPWEEYFLDDL 746
G++G+ ++ E + L +
Sbjct: 338 GRKGKAFTFVSGRELWKLQSM 358
>gi|406835858|ref|ZP_11095452.1| DEAD/DEAH box helicase [Schlesneria paludicola DSM 18645]
Length = 583
Score = 205 bits (521), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 135/375 (36%), Positives = 207/375 (55%), Gaps = 35/375 (9%)
Query: 376 LSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLL 435
++QK F E G+SP +KA+ G+ Q + +Q + LEG D + +++TG+GK+ AF +
Sbjct: 1 MTQKLFSELGLSPELLKAIERMGFEQASPIQAEAIPRLLEGHDVIGQSQTGSGKTAAFGI 60
Query: 436 PAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTR 495
PA+E L ++ Q +L++CPTRELASQ+A E L G+ L + GG
Sbjct: 61 PAVE--LADPTNRAVQ------ILMMCPTRELASQVAEEIAKLAAFKKGVRELPIFGGQS 112
Query: 496 FKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDV 555
+ R L++ P QI++ TPGRL+DHI K G +++L +KM+VLDEAD +LD+GFR+D+
Sbjct: 113 YDHQFRGLKAGP-QIVIGTPGRLIDHI--KQG-TLKLNEVKMVVLDEADRMLDMGFREDI 168
Query: 556 ENIVDCLPRRRQSLLFSATMPKELVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHF 615
E I++ +P RQ +LFSAT+P + E D V V+I+ + L P F
Sbjct: 169 ETILESIPTERQIVLFSATVPPPIRKIIERFTRDPVT-------VRIEATALNVPAIEQF 221
Query: 616 ----------QILHHLLKEHILGTPDYKV-IVFCSTGMVTSLLYLLLREMKMNVREMYSR 664
++L LL H D + +VF T + L L + +++
Sbjct: 222 YVEVDYRSKTEVLCRLLDLH-----DVRYGLVFGFTKIQVDQLTEALIARGYSADKLHGD 276
Query: 665 KPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGR 724
Q R+R + FR K +LV +DV+ARG+D D+ V +P D E Y+HR+GRTGR
Sbjct: 277 MTQPMRERTMKRFRDRKIELLVATDVAARGLDVDDLEIVFNYELPHDAEDYVHRIGRTGR 336
Query: 725 EGKEGEGVLLLAPWE 739
GK G+ + L++ E
Sbjct: 337 AGKSGKAISLVSGRE 351
>gi|238882849|gb|EEQ46487.1| hypothetical protein CAWG_04842 [Candida albicans WO-1]
Length = 569
Score = 205 bits (521), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 151/429 (35%), Positives = 229/429 (53%), Gaps = 34/429 (7%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F+ S T+KA+ G+ +MT+VQ T+ L G+D + AKTG+GK++AFL+PAIE
Sbjct: 114 FENADFSEPTMKAIKEMGFTKMTKVQAKTIPPLLAGRDVLGAAKTGSGKTLAFLIPAIEL 173
Query: 441 V--LKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHD-GIGVLTLVGGTRFK 497
+ LK + T V+I+ PTRELA QI A L++ H G++ +GG +
Sbjct: 174 LYSLKIKPRNGTA------VIIITPTRELALQIFGVARELMQFHSQTCGIV--IGGADRR 225
Query: 498 VDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVEN 557
+ +L + +LVATPGRLLDH++N + LK LV+DEAD +L++GF +++
Sbjct: 226 QEATKL-AKGVNLLVATPGRLLDHLKNTQFV---FSNLKALVIDEADRILEIGFEDEMKQ 281
Query: 558 IVDCLPRR-RQSLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIKQSCLVAP 610
I+ LP RQS+LFSAT + + L+ YI+ V V T ++Q +V
Sbjct: 282 IIKVLPNENRQSMLFSATQTTKVEDLARISLRPGPLYINVVPEKDVSTADGLEQGYVVCD 341
Query: 611 HELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYR 670
+ F +L LK ++ K+IVF S+ LL + + V +++ ++ Q R
Sbjct: 342 SDKRFLLLFSFLKRNV----KKKIIVFLSSCNSVKFYSELLNYIDLPVLDLHGKQKQQKR 397
Query: 671 DRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGE 730
EF +K+ ILV +DV+ARG+D P V +VQ P D YIHR+GRT R G +G+
Sbjct: 398 TNTFFEFCNAKQGILVCTDVAARGLDIPAVDWIVQFDPPDDPRDYIHRVGRTAR-GTQGK 456
Query: 731 G--VLLLAPWEEYFLDDLK--DLPLDKLQLPH---LNPEIQLQMDNHMAKIDNNVKEAAY 783
G ++ L P E FL LK +PL++ + P N + QL + N + Y
Sbjct: 457 GKSLMFLTPSELGFLRYLKAAKVPLNEYEFPANKIANIQSQLTKLIKTNYLLNQSAKDGY 516
Query: 784 HAWLGYYNS 792
A+L Y S
Sbjct: 517 RAYLQAYAS 525
>gi|255711788|ref|XP_002552177.1| KLTH0B08998p [Lachancea thermotolerans]
gi|238933555|emb|CAR21739.1| KLTH0B08998p [Lachancea thermotolerans CBS 6340]
Length = 492
Score = 205 bits (521), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 158/467 (33%), Positives = 244/467 (52%), Gaps = 48/467 (10%)
Query: 378 QKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPA 437
+++F E +SP T+KA+ G+ MT+VQ T+ L G+D + AKTG+GK++AFLLPA
Sbjct: 27 KEKFAELNLSPPTMKAIDKMGFTTMTQVQSRTIPPLLAGRDVLGAAKTGSGKTLAFLLPA 86
Query: 438 IEAV--LKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHD-GIGVLTLVGGT 494
IE + LK + T V+++ PTRELA QI A L++ H G+ ++GG
Sbjct: 87 IEMLHSLKFKPRNGTG------VIVITPTRELALQIFGVAKTLMEFHSQTFGI--VIGGA 138
Query: 495 RFKVDQRRLESDP----CQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLG 550
RR E+D +L+ATPGRLLDH++N + LK LV+DEAD +L++G
Sbjct: 139 -----NRRQEADKLAKGVNLLIATPGRLLDHLQNTKDFVFK--NLKALVIDEADRILEIG 191
Query: 551 FRKDVENIVDCLP-RRRQSLLFSATMPKE------LVLKREHTYIDTVGLGSVETPVKIK 603
F ++ IV LP RQ++LFSAT + + L+ +I+ T ++
Sbjct: 192 FEDEMRQIVKILPSEERQTMLFSATQTTKVEDLARISLRPGPLFINVDSEKQTSTADGLE 251
Query: 604 QSCLVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYS 663
Q +V + F +L LK + K+IVF S+ LL + + V E++
Sbjct: 252 QGYVVCDSDKRFLLLFSFLKRN----QKKKIIVFLSSCNSVRYYAELLNYIDLPVLELHG 307
Query: 664 RKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTG 723
++ Q R EF ++R LV +DV+ARG+D P V ++Q P D YIHR+GRT
Sbjct: 308 KQKQQKRTNTFFEFCNAERGTLVCTDVAARGLDIPAVDWIIQFDPPDDPRDYIHRVGRTA 367
Query: 724 REGK-EGEGVLLLAPWEEYFLDDLK--DLPLDKLQLPH---LNPEIQLQ----MDNHMAK 773
R K +G+ ++ L P E FL LK +PL++ + P N + QL+ + H+ +
Sbjct: 368 RGSKGKGKSLMFLTPNELGFLRYLKAAKVPLNEYEFPSNKIANVQSQLEKLIKSNYHLHQ 427
Query: 774 IDNNVKEAAYHAWLGYYNSIREIGRDKTTLVELANKFAQSIGLQRPP 820
I + Y ++L Y+S + ++LA K A+S G PP
Sbjct: 428 IAKD----GYRSYLQAYSSHSLKTVYQIDKLDLA-KVAKSYGFPIPP 469
>gi|6320400|ref|NP_010480.1| Mss116p [Saccharomyces cerevisiae S288c]
gi|127324|sp|P15424.1|MS116_YEAST RecName: Full=ATP-dependent RNA helicase MSS116, mitochondrial;
Flags: Precursor
gi|755787|emb|CAA88707.1| Mss116p [Saccharomyces cerevisiae]
gi|256272859|gb|EEU07828.1| Mss116p [Saccharomyces cerevisiae JAY291]
gi|285811212|tpg|DAA12036.1| TPA: Mss116p [Saccharomyces cerevisiae S288c]
gi|392300309|gb|EIW11400.1| Mss116p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 664
Score = 205 bits (521), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 151/476 (31%), Positives = 246/476 (51%), Gaps = 39/476 (8%)
Query: 392 KALTAAGYIQMTRVQEATLSACL--EGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSST 449
KA+T + +T VQ+ T+ L E D + +AKTGTGK+ AFL+P + ++ S
Sbjct: 119 KAITRMEFPGLTPVQQKTIKPILSSEDHDVIARAKTGTGKTFAFLIPIFQHLINTKFDSQ 178
Query: 450 TQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGI---GVLTLVGGTRFKVDQRRLESD 506
+ +I+ PTR+LA QI AE + + G+ ++LVGGT F+ ++
Sbjct: 179 YM----VKAVIVAPTRDLALQIEAEVKKIHDMNYGLKKYACVSLVGGTDFRAAMNKMNKL 234
Query: 507 PCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRR 566
I++ATPGRL+D +E S R + K VLDEAD LL++GFR D+E I L +
Sbjct: 235 RPNIVIATPGRLIDVLEKYSNKFFRFVDYK--VLDEADRLLEIGFRDDLETISGILNEKN 292
Query: 567 -------QSLLFSATM-------PKELVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHE 612
++LLFSAT+ ++ K+E ++DTV E +I QS +++
Sbjct: 293 SKSADNIKTLLFSATLDDKVQKLANNIMNKKECLFLDTVDKNEPEAHERIDQSVVISEKF 352
Query: 613 LH--FQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLR-EMK--MNVREMYSRKPQ 667
+ F + H+ K+ +YK I+F T TS L +L+ E K + + E + + Q
Sbjct: 353 ANSIFAAVEHIKKQIKERDSNYKAIIFAPTVKFTSFLCSILKNEFKKDLPILEFHGKITQ 412
Query: 668 LYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGK 727
R + + F+ + ILV +DV ARGMD+P+V V+Q+G+P + YIHR+GRT R GK
Sbjct: 413 NKRTSLVKRFKKDESGILVCTDVGARGMDFPNVHEVLQIGVPSELANYIHRIGRTARSGK 472
Query: 728 EGEGVLLLAPWEEYF---LDDLKDLPLDKLQLPHLNPEIQLQMDNHMAKIDNNVKEAAYH 784
EG VL + E F L+D K++ + K + + EI+ ++ + + ++ +
Sbjct: 473 EGSSVLFICKDELPFVRELEDAKNIVIAKQEKYEPSEEIKSEVLEAVTEEPEDISDIVIS 532
Query: 785 AWLGYYNSIREI-GRDKTTLVELANKFAQSIGLQRPP---PLFRKTALKMGLKDIP 836
Y + I+E ++ L E+A+ + + L P P+ R+ K+GL P
Sbjct: 533 LISSYRSCIKEYRFSERRILPEIASTYG--VLLNDPQLKIPVSRRFLDKLGLSRSP 586
>gi|118444591|ref|YP_877094.1| ATP-dependent RNA helicase [Clostridium novyi NT]
gi|118135047|gb|ABK62091.1| ATP-dependent RNA helicase [Clostridium novyi NT]
Length = 528
Score = 205 bits (521), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 131/424 (30%), Positives = 219/424 (51%), Gaps = 22/424 (5%)
Query: 376 LSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLL 435
+ + +F+ IS A+ G+ + + +QE + L GKD + +A+TGTGK+ AF +
Sbjct: 1 MEKIKFENLPISDEIKSAIADMGFEEPSPIQEKAIPFILSGKDIIGQAQTGTGKTAAFGI 60
Query: 436 PAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTR 495
PA++ + + + +++LCPTRELA Q E L K G+ VL + GG
Sbjct: 61 PALDTIDLNNRN--------LQIMVLCPTRELAIQATQEITKLGKYKKGLNVLAIYGGQP 112
Query: 496 FKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDV 555
+ L+ QI++ TPGR++DHI K+ ++ +KM+VLDEAD +LD+GFR D+
Sbjct: 113 IDRQIKALKRG-VQIVIGTPGRVIDHINRKT---LKTDNIKMVVLDEADEMLDMGFRDDI 168
Query: 556 ENIVDCLPRRRQSLLFSATMPKELV--LKREHTYIDTVGLGSVETPV-KIKQSCLVAPHE 612
E I+ +P RQ++LFSATMPK +V K+ T + + + + V I+Q +
Sbjct: 169 ETIIQSVPENRQTILFSATMPKAIVELSKKYQTKAEFIKVVHRQLTVPNIEQRYIEVKEN 228
Query: 613 LHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDR 672
++L L+ + P VI FC+T + L+ ++ Q RDR
Sbjct: 229 FKIEVLSRLID---MRNPKLSVI-FCNTKKRVDEVVSELQSRGYFAEGLHGDMKQPQRDR 284
Query: 673 ISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGV 732
+ +FR ILV +DV+ARG+D DV +V +P D E Y+HR+GRTGR G+ G
Sbjct: 285 VMSKFRNGTIEILVATDVAARGIDVDDVEAVFNYDLPQDEEYYVHRIGRTGRAGRSGIAF 344
Query: 733 LLLAPWEEYFLDDLKDLPLDKL---QLPHLNPEIQLQMDNHMAKIDNNVKEAAYHAWLGY 789
+A L D++ K+ ++P N + + + + K+ N +++ ++ Y
Sbjct: 345 TFVAGKAMRKLRDIERYTKTKIKRAEIPSANDVEEFKANTFLEKVKNTIEDGHLGKYIDY 404
Query: 790 YNSI 793
++
Sbjct: 405 IENL 408
>gi|406937818|gb|EKD71181.1| hypothetical protein ACD_46C00260G0006 [uncultured bacterium]
Length = 543
Score = 205 bits (521), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 150/402 (37%), Positives = 213/402 (52%), Gaps = 40/402 (9%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F + ++ KAL A GY + T VQ ++ A L G D V A+TGTGK+ AF+LPA++
Sbjct: 3 FAQLNLNDHLHKALKACGYTEPTSVQAKSIPAILAGNDLVACAQTGTGKTAAFVLPALQR 62
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+ S TT+ +LIL PTRELA+QI +A +L +++LVGG +
Sbjct: 63 LSMQKPSKTTR------ILILTPTRELAAQIT-KAASLYGKFLKFNIVSLVGGMPYHHQI 115
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
+ L + I+VATPGRLLDHIE+K V L ++MLVLDEAD +LD+GF DV I
Sbjct: 116 KDL-ARGADIIVATPGRLLDHIESKR---VDLSHVEMLVLDEADRMLDMGFIDDVTTIAK 171
Query: 561 CLPRRRQSLLFSATMPKELVLKREHTYIDTVGLG----SVETPVKIKQSCLVAPHELHFQ 616
P +RQ+LLFSAT+ K+L H + + + + P KIKQ + +
Sbjct: 172 LTPEQRQTLLFSATIDKQLSHVIRHLLKNPIRIDLSNEKISAP-KIKQEL----YRVKNT 226
Query: 617 ILHHLLKEHILGTPD-YKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISE 675
L +H+LG + YK I+F +T M L L + ++ Q R+R E
Sbjct: 227 QHKLQLLKHLLGDKNIYKAIIFSATKMNADRLADQLCDEGFPAAALHGDLRQNVRNRTVE 286
Query: 676 EFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLL 735
+ R K LV +DV+ARG+D D+T V+ +P E Y+HR+GRTGR GK G + +
Sbjct: 287 QLRRGKIQFLVATDVAARGLDISDITHVINYDLPRFSEDYVHRIGRTGRAGKSGVAISFV 346
Query: 736 APWE-------EYFLDDLKDLPLDKLQLPHLNPEIQLQMDNH 770
P + E ++D+ LPL L H LQMD H
Sbjct: 347 LPTDMRHVQRIERYIDER--LPL----LSH------LQMDTH 376
>gi|170582010|ref|XP_001895938.1| ATP-dependent RNA helicase DDX18 [Brugia malayi]
gi|158596969|gb|EDP35219.1| ATP-dependent RNA helicase DDX18, putative [Brugia malayi]
Length = 547
Score = 205 bits (521), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 153/456 (33%), Positives = 247/456 (54%), Gaps = 37/456 (8%)
Query: 386 ISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEAVLKAT 445
+S T+ A+T G+ +MT +Q + L+G+D + AKTG+GK++AFL+PA+E ++K
Sbjct: 72 LSESTLLAITEMGFTKMTEIQAKCIEPLLQGRDVIASAKTGSGKTLAFLIPAVELLIKLE 131
Query: 446 SSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQRRLES 505
+ V+++ PTREL+ Q +L H + ++GG + + ++L +
Sbjct: 132 WKARNG----TGVIVISPTRELSMQTYGVLSEILAKHPTLTHGLIMGGANRQAEAQKL-A 186
Query: 506 DPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRR 565
LVATPGRLLDH++N G V+ LK L++DEAD +LD+GF +++ I+ LP++
Sbjct: 187 RGVSFLVATPGRLLDHLQNTDGFMVK--NLKCLIIDEADRILDIGFEIEMQQILRVLPKK 244
Query: 566 RQSLLFSAT-MPK--ELVLKREHTYIDTVGLGSVE--------TPVKIKQSCLVAPHELH 614
RQ++ FSAT PK ELV HT VG+ + T ++Q +V P E
Sbjct: 245 RQTMFFSATQTPKVDELVKAALHTDPVKVGINKINPKNGSELATVSGLQQGYVVCPSEKR 304
Query: 615 FQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRIS 674
F +L LK++ D KV+VF S+ + LL + ++V+ ++ ++ Q R
Sbjct: 305 FLLLFTFLKKN----RDKKVMVFFSSCNSVKYHHELLNYIDISVQCIHGKQKQQKRTCTF 360
Query: 675 EEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEG--V 732
F +K IL+ +DV+ARG+D P V +VQ P + +YIHR+GRT R G G G +
Sbjct: 361 FSFCQAKSGILLCTDVAARGLDIPQVDWIVQYDPPDEPREYIHRVGRTAR-GVTGTGHAL 419
Query: 733 LLLAPWEEYFLDDLKD--LPLDKLQLPHLN-PEIQLQMDN---HMAKIDNNVKEAAYHAW 786
L+L P E FL LK + L++ + IQ+Q++ H ++ + KE AY +
Sbjct: 420 LILRPEELGFLRYLKHAKVLLNEYEFSWSKIANIQMQLEKLIEHNYYLNKSAKE-AYKCY 478
Query: 787 LGYY--NSIREIGRDKTTLVELANKFAQSIGLQRPP 820
+ Y +S++ I D TL +A ++S G PP
Sbjct: 479 IRAYDSHSLKNI-FDVNTLDLIA--VSKSFGFSTPP 511
>gi|171059208|ref|YP_001791557.1| DEAD/DEAH box helicase [Leptothrix cholodnii SP-6]
gi|170776653|gb|ACB34792.1| DEAD/DEAH box helicase domain protein [Leptothrix cholodnii SP-6]
Length = 502
Score = 204 bits (520), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 134/366 (36%), Positives = 202/366 (55%), Gaps = 23/366 (6%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
FD G+ +K++TAAGY T VQ T+ L+G D V + TG+GK+ AF+LPA++
Sbjct: 3 FDTLGLHEAILKSVTAAGYDTPTDVQAQTIPPALQGLDLRVCSNTGSGKTAAFVLPALQR 62
Query: 441 VLKA-----TSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTR 495
VL A + + Q+ P VL+L PTRELA Q++ A ++ G+ V T+VGG
Sbjct: 63 VLAARNDPSKARAKGQVCGP-RVLVLAPTRELAMQVSKAASTYGQHVAGLRVATIVGGVP 121
Query: 496 FKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDV 555
+ L P IL+ATPGRL+DH+ SG +V L ++ML+LDEAD +LD+GF +D+
Sbjct: 122 YPAQLAALRK-PLDILIATPGRLIDHL--NSGKAV-LGDVEMLILDEADRMLDMGFIEDI 177
Query: 556 ENIVDCLPRRRQSLLFSATMPKEL------VLKREHTYIDTVGLGSVETPVKIKQSCLVA 609
E I + LP+ RQ+++ SAT ++ +LK + I+ + I+Q L A
Sbjct: 178 ERIAESLPQERQTVMVSATFAGQVGRLADQILKSDAKRIEITS--HTDNHENIEQQLLWA 235
Query: 610 PHELH-FQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQL 668
H ++L HLL E + + +VF ST L L E+ V ++ PQ
Sbjct: 236 DSIEHKAKLLEHLLTEREM----QQALVFTSTQRDADELAAHLYELGHAVAPLHGGMPQG 291
Query: 669 YRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKE 728
R R R + +L+ +DV+ARG+D P ++ V+ G+P E Y+HR+GRTGR G+
Sbjct: 292 RRSRTLMALRNGEIKVLIATDVAARGIDVPTISHVINFGLPMKAEDYVHRIGRTGRAGRT 351
Query: 729 GEGVLL 734
G + L
Sbjct: 352 GRAITL 357
>gi|290968757|ref|ZP_06560294.1| ATP-dependent RNA helicase DeaD family protein [Megasphaera
genomosp. type_1 str. 28L]
gi|335049114|ref|ZP_08542124.1| DEAD-box ATP-dependent RNA helicase CshA [Megasphaera sp. UPII
199-6]
gi|290781053|gb|EFD93644.1| ATP-dependent RNA helicase DeaD family protein [Megasphaera
genomosp. type_1 str. 28L]
gi|333764226|gb|EGL41626.1| DEAD-box ATP-dependent RNA helicase CshA [Megasphaera sp. UPII
199-6]
Length = 520
Score = 204 bits (520), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 137/375 (36%), Positives = 202/375 (53%), Gaps = 20/375 (5%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
++F IS + ++AL A G+ + T +Q ++ L+G D + +A+TGTGK+ AF +P +
Sbjct: 3 EKFQNLKISEVILQALNAMGFEEPTPIQAESIPVALQGADMIGQAQTGTGKTAAFGIPVL 62
Query: 439 EAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
E +LK + + Q V +L PTRELA Q+A E + L I L + GG +
Sbjct: 63 EKILKNEPTQSIQTV------VLSPTRELAMQVAEE-LNHLAQCTTIQALPIYGGQDMER 115
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
RRL P QI+VATPGRL+DH+ K G ++ L + +VLDEAD +LD+GF D+ I
Sbjct: 116 QLRRLRKHP-QIIVATPGRLMDHM--KRG-TIDLSDIHTIVLDEADEMLDMGFIDDINTI 171
Query: 559 VDCLPRRRQSLLFSATMPKELVLKREHTYI---DTVGLGSVETPVK-IKQSCLVAPHELH 614
+ P RQ+LLFSATMPK + E T++ + + + E + I+QS + P
Sbjct: 172 MSATPDTRQTLLFSATMPKPIQQLAE-TFLHEPQIIRMKAKEVTMDLIEQSYIETPDRQK 230
Query: 615 FQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRIS 674
F +L LL L PD I+F T + L++ + ++ Q RD +
Sbjct: 231 FDVLCRLLD---LQEPDL-AIIFVRTKRRVDEVAEALKKRGYSSEGIHGDLTQAKRDSVI 286
Query: 675 EEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLL 734
+FR ILV +DV+ARG+D VT V +P D E Y+HR+GRTGR GK GE
Sbjct: 287 RQFREKTIDILVATDVAARGLDISGVTHVFNYDLPQDPESYVHRVGRTGRAGKSGEATTF 346
Query: 735 LAPWEEYFLDDLKDL 749
+ P E L ++ L
Sbjct: 347 VIPREMEHLRAIERL 361
>gi|254565179|ref|XP_002489700.1| ATP-dependent RNA helicase [Komagataella pastoris GS115]
gi|238029496|emb|CAY67419.1| ATP-dependent RNA helicase [Komagataella pastoris GS115]
gi|328350119|emb|CCA36519.1| ATP-dependent RNA helicase DDX18 [Komagataella pastoris CBS 7435]
Length = 546
Score = 204 bits (520), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 154/462 (33%), Positives = 238/462 (51%), Gaps = 44/462 (9%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F + +S T+KA+ G+ +MT VQ T+ L G+D + AKTG+GK++AFL+PAIE
Sbjct: 86 FTDLKLSEPTLKAIGNMGFTKMTAVQARTIPPLLAGRDVLGAAKTGSGKTLAFLIPAIEM 145
Query: 441 V--LKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHD-GIGVLTLVGGTRFK 497
+ LK + T +++ PTRELA QI A L+++H G+L +GG +
Sbjct: 146 LYSLKFKPRNGTG------AIVITPTRELALQIFGVARELMESHSQTFGIL--IGGANRR 197
Query: 498 VDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVEN 557
+ +L I++ATPGRLLDH++N G + LK L++DEAD +L++GF +++
Sbjct: 198 AEAEKLMKG-VNIIIATPGRLLDHLQNTKGFIFK--NLKALIIDEADRILEIGFEDEMKQ 254
Query: 558 IVDCLPRR-RQSLLFSATMPKEL------VLKREHTYIDTVGLGSVETPVKIKQSCLVAP 610
I+ LP RQ++LFSAT ++ L++ YI+ T ++Q +V
Sbjct: 255 IIKILPNENRQTMLFSATQTTKVEDLARVSLRKGPLYINVDSENETSTVDGLEQGYVVCD 314
Query: 611 HELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYR 670
+ F +L LK + K+IVF S+ LL + + V +++ ++ Q R
Sbjct: 315 SDKRFLLLFSFLKRN----QKKKIIVFLSSCNSVKYYSELLNYIDLPVLDLHGKQKQQKR 370
Query: 671 DRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGE 730
EF + + +L+ +DV+ARG+D P V ++Q P D YIHR+GRT R G G+
Sbjct: 371 TNTFFEFCNATQGVLICTDVAARGLDIPSVDWIIQFDPPDDPRDYIHRVGRTAR-GSNGK 429
Query: 731 G--VLLLAPWEEYFLDDLK--DLPLDKLQLPH---LNPEIQLQMDNHMAKIDNNVKEAAY 783
G ++ L P E FL LK +PL++ + P N + QL+ N Y
Sbjct: 430 GKSLMFLIPSELGFLRYLKAAKVPLNEFEFPTNKIANVQSQLEKLIKSNYWLNQSARDGY 489
Query: 784 HAWLGYYNS-----IREIGRDKTTLVELANKFAQSIGLQRPP 820
A+L Y S + +I DK L NK AQS G PP
Sbjct: 490 TAYLQAYASHHLKTVYQI--DKLDL----NKVAQSFGFSVPP 525
>gi|254490715|ref|ZP_05103899.1| DbpA RNA binding domain family [Methylophaga thiooxidans DMS010]
gi|224464070|gb|EEF80335.1| DbpA RNA binding domain family [Methylophaga thiooxydans DMS010]
Length = 605
Score = 204 bits (520), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 142/385 (36%), Positives = 208/385 (54%), Gaps = 26/385 (6%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F E GI+P +KA+ AGY + +Q +++ LEG+D + +A+TGTGK+ AF LP +
Sbjct: 12 FSELGIAPAIVKAIQEAGYETPSPIQAQSITPLLEGRDLLGQAQTGTGKTAAFSLPLLSR 71
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNH-DGIGVLTLVGGTRFKVD 499
+ + Q P +L+L PTRELA Q+A EAI H VL + GG +
Sbjct: 72 L------NDRQKTP--QMLVLTPTRELAIQVA-EAIQGYGRHIKNFHVLPIYGGQSMGIQ 122
Query: 500 QRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIV 559
R+L+ +P Q++V TPGR+LDHI + L L+ LVLDEAD +L +GF DVE I+
Sbjct: 123 LRQLQRNP-QVIVGTPGRILDHIRRGK---LALENLQSLVLDEADEMLRMGFIDDVETIL 178
Query: 560 DCLPRRRQSLLFSATMPKELVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQI-- 617
P+ RQ LFSATMPK + H VE +K K S + ++ ++Q+
Sbjct: 179 QETPKDRQVALFSATMPKPI-----HRVAQRYLNNPVEVHIKSKTSTVDTINQRYWQVTG 233
Query: 618 LHHL-LKEHILGTPDYK-VIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISE 675
LH L IL ++ +I+F T T L L + Q R++ E
Sbjct: 234 LHKLDALTRILEVEEFDGMIIFVRTKNSTVDLAEKLEARGYASSPLNGDMNQALREKTIE 293
Query: 676 EFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLL 735
+ +A K ILV +DV+ARG+D ++ VV IP D E Y+HR+GRTGR G++GE +L +
Sbjct: 294 KMKAGKIDILVATDVAARGLDIQRMSHVVNYDIPYDTESYVHRIGRTGRAGRKGEAILFV 353
Query: 736 APWEEYFLDDLKDL---PLDKLQLP 757
AP E L ++ + ++QLP
Sbjct: 354 APRERRMLGAIEKATKQTITRMQLP 378
>gi|347541119|ref|YP_004848545.1| ATP-dependent RNA helicase RhlE [Pseudogulbenkiania sp. NH8B]
gi|345644298|dbj|BAK78131.1| ATP-dependent RNA helicase RhlE [Pseudogulbenkiania sp. NH8B]
Length = 455
Score = 204 bits (520), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 134/372 (36%), Positives = 199/372 (53%), Gaps = 12/372 (3%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F E G+SP ++A+ GY + T +Q + L G+D + A+TGTGK+ AF+LP +E
Sbjct: 3 FAELGLSPEILRAIDEQGYSEPTPIQAKAIPLVLSGRDLLAAAQTGTGKTAAFMLPILER 62
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+ K S+S + + P+ LIL PTRELA QIA A A K + + + GG
Sbjct: 63 LKKFASTSASPAMHPVRALILSPTRELADQIAVNAAAYTK-YLPLRSTVVFGGMNMDPQT 121
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
+ L +IL+ATPGRLLDH+ K +V+L + +LVLDEAD +LD+GF D+ I+
Sbjct: 122 QELRRG-VEILIATPGRLLDHVGQK---TVQLNKVDVLVLDEADRMLDMGFINDIRKILG 177
Query: 561 CLPRRRQSLLFSATMPKELVLKREHTYID--TVGLG-SVETPVKIKQSCLVAPHELHFQI 617
LPR RQ+LLFSAT E+ E D TV + T +++Q + +
Sbjct: 178 MLPRTRQTLLFSATFAPEIKRLAEEFMHDPQTVEVARQNSTNAQVEQLVFSVDSQRKRYL 237
Query: 618 LHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEEF 677
L HL++E +G +VIVFC T + L L+ ++ K Q R F
Sbjct: 238 LSHLIRERQMG----QVIVFCKTKLSADQLARDLKRDGHAAEAIHGDKAQGARLETLTAF 293
Query: 678 RASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLAP 737
+ + +LV +DV+ARG+D ++ VV +P E Y+HR+GRTGR G G + L+
Sbjct: 294 KNGEVKVLVATDVAARGLDISELPYVVNFELPNAPEDYVHRIGRTGRAGASGVAISLMGQ 353
Query: 738 WEEYFLDDLKDL 749
E L+ ++ L
Sbjct: 354 DEGKQLEAIEKL 365
>gi|259145433|emb|CAY78697.1| Mss116p [Saccharomyces cerevisiae EC1118]
Length = 664
Score = 204 bits (520), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 151/476 (31%), Positives = 246/476 (51%), Gaps = 39/476 (8%)
Query: 392 KALTAAGYIQMTRVQEATLSACL--EGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSST 449
KA+T + +T VQ+ T+ L E D + +AKTGTGK+ AFL+P + ++ S
Sbjct: 119 KAITRMEFPGLTPVQQKTIKPILSSEDHDVIARAKTGTGKTFAFLIPIFQHLINTKFDSQ 178
Query: 450 TQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGI---GVLTLVGGTRFKVDQRRLESD 506
+ +I+ PTR+LA QI AE + + G+ ++LVGGT F+ ++
Sbjct: 179 YM----VKAVIVAPTRDLALQIEAEVKKIHDMNYGLKKYACVSLVGGTDFRAAMNKMNKL 234
Query: 507 PCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRR 566
I++ATPGRL+D +E S R + K VLDEAD LL++GFR D+E I L +
Sbjct: 235 RPNIVIATPGRLIDVLEKYSNKFFRFVDYK--VLDEADRLLEIGFRDDLETISGILNEKN 292
Query: 567 -------QSLLFSATM-------PKELVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHE 612
++LLFSAT+ ++ K+E ++DTV E +I QS +++
Sbjct: 293 SKSADNIKTLLFSATLDDKVQKLANNIMNKKECLFLDTVDKNEPEAHERIDQSVVISEKF 352
Query: 613 LH--FQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLR-EMK--MNVREMYSRKPQ 667
+ F + H+ K+ +YK I+F T TS L +L+ E K + + E + + Q
Sbjct: 353 ANSIFAAVEHIKKQIKERDSNYKAIIFAPTVKFTSFLCSILKNEFKKDLPILEFHGKITQ 412
Query: 668 LYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGK 727
R + + F+ + ILV +DV ARGMD+P+V V+Q+G+P + YIHR+GRT R GK
Sbjct: 413 NKRTSLVKRFKKDESGILVCTDVGARGMDFPNVHEVLQIGVPSELANYIHRIGRTARSGK 472
Query: 728 EGEGVLLLAPWEEYF---LDDLKDLPLDKLQLPHLNPEIQLQMDNHMAKIDNNVKEAAYH 784
EG VL + E F L+D K++ + K + + EI+ ++ + + ++ +
Sbjct: 473 EGSSVLFICKDELPFVRELEDAKNIVIAKQEKYEPSEEIKSEVLEAVTEEPEDISDIVIS 532
Query: 785 AWLGYYNSIREI-GRDKTTLVELANKFAQSIGLQRPP---PLFRKTALKMGLKDIP 836
Y + I+E ++ L E+A+ + + L P P+ R+ K+GL P
Sbjct: 533 LISSYRSCIKEYRFSERRILPEIASTYG--VLLNDPQLKIPVSRRFLDKLGLSRSP 586
>gi|115352406|ref|YP_774245.1| DEAD/DEAH box helicase [Burkholderia ambifaria AMMD]
gi|115282394|gb|ABI87911.1| DEAD/DEAH box helicase domain protein [Burkholderia ambifaria AMMD]
Length = 497
Score = 204 bits (520), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 133/374 (35%), Positives = 207/374 (55%), Gaps = 16/374 (4%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
FD+ G++ +KA+ GY T +Q + L G+D + A+TGTGK+ +F LP I+
Sbjct: 13 FDQFGLAADILKAIAEQGYTTPTPIQAQAIPVVLAGRDVMGAAQTGTGKTASFSLPIIQR 72
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+L S+S + P+ LIL PTRELA Q+AA A K H + + GG
Sbjct: 73 LLPQASTSASPARHPVRALILTPTRELADQVAANVHAYAK-HTSLRSAVVFGGVDMNPQM 131
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
L +IL+ATPGRLLDH++ K+ L +++LVLDEAD +LD+GF D++ I++
Sbjct: 132 AELRRG-VEILIATPGRLLDHVQQKTA---NLGQVQILVLDEADRMLDMGFLPDLQRILN 187
Query: 561 CLPRRRQSLLFSATMPKELVLKREHTYI---DTVGLG-SVETPVKIKQSCL-VAPHELHF 615
LP+ RQ+LLFSAT E + K TY+ T+ + S T + Q VA + H
Sbjct: 188 LLPKERQTLLFSATFSPE-IKKLASTYLRNPQTIEVARSNSTNANVTQIVYDVAEGDKHG 246
Query: 616 QILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISE 675
++ LL++ L +V+VFC++ + S L L + ++ K QL R + +
Sbjct: 247 AVV-QLLRDRGL----KQVLVFCNSKIGASRLARNLERDGVVASAIHGDKSQLERMQALD 301
Query: 676 EFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLL 735
F+ + LV +DV+ARG+D ++ +V+ +P + E Y+HR+GRTGR G G+ + L
Sbjct: 302 AFKRGEIEALVATDVAARGLDIAELPAVINFDLPFNAEDYVHRIGRTGRAGATGDALSLC 361
Query: 736 APWEEYFLDDLKDL 749
+P E L D++ L
Sbjct: 362 SPNERKQLADIEKL 375
>gi|151942176|gb|EDN60532.1| ATP-dependent RNA helicase [Saccharomyces cerevisiae YJM789]
Length = 664
Score = 204 bits (520), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 151/476 (31%), Positives = 246/476 (51%), Gaps = 39/476 (8%)
Query: 392 KALTAAGYIQMTRVQEATLSACL--EGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSST 449
KA+T + +T VQ+ T+ L E D + +AKTGTGK+ AFL+P + ++ S
Sbjct: 119 KAITRMEFPGLTPVQQKTIKPILSSEDHDVIARAKTGTGKTFAFLIPIFQHLINTKFDSQ 178
Query: 450 TQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGI---GVLTLVGGTRFKVDQRRLESD 506
+ +I+ PTR+LA QI AE + + G+ ++LVGGT F+ ++
Sbjct: 179 YM----VKAVIVAPTRDLALQIEAEVKKIHDMNYGLKKYACVSLVGGTDFRAAMNKMNKL 234
Query: 507 PCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRR 566
I++ATPGRL+D +E S R + K VLDEAD LL++GFR D+E I L +
Sbjct: 235 RPNIVIATPGRLIDVLEKYSNKFFRFVDYK--VLDEADRLLEIGFRDDLETISGILNEKN 292
Query: 567 -------QSLLFSATM-------PKELVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHE 612
++LLFSAT+ ++ K+E ++DTV E +I QS +++
Sbjct: 293 SKSADNIKTLLFSATLDDKVQKLANNIMNKKECLFLDTVDKNEPEAHERIDQSVVISEKF 352
Query: 613 LH--FQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLR-EMK--MNVREMYSRKPQ 667
+ F + H+ K+ +YK I+F T TS L +L+ E K + + E + + Q
Sbjct: 353 ANSIFAAVEHIKKQIKERDSNYKAIIFAPTVKFTSFLCSILKNEFKKDLPILEFHGKITQ 412
Query: 668 LYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGK 727
R + + F+ + ILV +DV ARGMD+P+V V+Q+G+P + YIHR+GRT R GK
Sbjct: 413 NKRTSLVKRFKKDESGILVCTDVGARGMDFPNVHEVLQIGVPSELANYIHRIGRTARSGK 472
Query: 728 EGEGVLLLAPWEEYF---LDDLKDLPLDKLQLPHLNPEIQLQMDNHMAKIDNNVKEAAYH 784
EG VL + E F L+D K++ + K + + EI+ ++ + + ++ +
Sbjct: 473 EGSSVLFICKDELPFVRELEDAKNIVIAKQEKYEPSEEIKSEVLEAVTEEPEDISDIVIS 532
Query: 785 AWLGYYNSIREI-GRDKTTLVELANKFAQSIGLQRPP---PLFRKTALKMGLKDIP 836
Y + I+E ++ L E+A+ + + L P P+ R+ K+GL P
Sbjct: 533 LISSYRSCIKEYRFSERRILPEIASTYG--VLLNDPQLKIPVSRRFLDKLGLSRSP 586
>gi|437999624|ref|YP_007183357.1| ATP-dependent RNA helicase [Candidatus Kinetoplastibacterium
blastocrithidii (ex Strigomonas culicis)]
gi|451813247|ref|YP_007449700.1| ATP-dependent RNA helicase [Candidatus Kinetoplastibacterium
blastocrithidii TCC012E]
gi|429338858|gb|AFZ83280.1| ATP-dependent RNA helicase [Candidatus Kinetoplastibacterium
blastocrithidii (ex Strigomonas culicis)]
gi|451779216|gb|AGF50096.1| ATP-dependent RNA helicase [Candidatus Kinetoplastibacterium
blastocrithidii TCC012E]
Length = 468
Score = 204 bits (520), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 127/369 (34%), Positives = 203/369 (55%), Gaps = 24/369 (6%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F++ GI+ + AL +G++ T VQEAT+ L GKD +V A+TG+GK+ AF+LP ++
Sbjct: 3 FEKIGINSNILSALKTSGFVSPTPVQEATIPQALSGKDLIVSAQTGSGKTAAFMLPILQM 62
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+ + S+ + P VL+L PTRELA QI + N + + T+VGG ++ +Q
Sbjct: 63 LSQKPKSNN---INP-QVLVLTPTRELALQITKATASYGINMPWLRIATIVGGMPYR-NQ 117
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
R S ILVATPGRL+D +++ V L ++ LVLDEAD +LD+GF +D+E IV
Sbjct: 118 IRALSKRVDILVATPGRLIDQMKSNK---VSLTSIQTLVLDEADRMLDMGFIEDIETIVK 174
Query: 561 CLPRRRQSLLFSAT-------MPKELVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHEL 613
PR RQ++LFSAT + K+++ +H + + S + I Q A +
Sbjct: 175 NTPRDRQTMLFSATIDESIARLAKKMMNNPQHIALTS----SKQKHDNITQKLFYADNNE 230
Query: 614 H-FQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDR 672
H ++L+H+L E L + I+F ST L L + +V ++ Q R R
Sbjct: 231 HKVKLLNHVLNESSLD----QAIIFTSTKKGADKLAECLSDNGFSVAALHGDMNQRQRTR 286
Query: 673 ISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGV 732
+ + + +LV +D++ARG+D ++ V +P E Y+HR+GRTGR G+ G +
Sbjct: 287 TISQLQKKQIRVLVATDIAARGIDINGISHAVNFDLPMQAEDYVHRIGRTGRAGRNGSAL 346
Query: 733 LLLAPWEEY 741
L+ E++
Sbjct: 347 SLVTNEEKH 355
>gi|237747736|ref|ZP_04578216.1| ATP-dependent RNA helicase [Oxalobacter formigenes OXCC13]
gi|229379098|gb|EEO29189.1| ATP-dependent RNA helicase [Oxalobacter formigenes OXCC13]
Length = 469
Score = 204 bits (520), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 135/398 (33%), Positives = 212/398 (53%), Gaps = 21/398 (5%)
Query: 377 SQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLP 436
S K+F++ G+SP +KAL GY+ T +Q + LEGKD + A+TGTGK+ + LP
Sbjct: 13 SDKKFEDFGLSPDILKALDDLGYVSPTPIQVQAIPLVLEGKDVMGAAQTGTGKTAGYSLP 72
Query: 437 AIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRF 496
++++L + ++S + P+ LIL PTRELA Q+ E + + + + GG
Sbjct: 73 MLQSLLFSANTSMSPARHPVRALILVPTRELADQV-FEDVKRYAKYTPVKSAVVFGGVDI 131
Query: 497 KVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVE 556
L + +IL+ATPGRLLDH++ K +V L ++LVLDEAD +LD+GF D++
Sbjct: 132 SSQTSILRAG-VEILIATPGRLLDHVQQK---NVNLSHTQILVLDEADRMLDMGFLPDLQ 187
Query: 557 NIVDCLPRRRQSLLFSATMPKELVLKREHTYIDTVGLGSVE---TPVKIKQSCLVAPHEL 613
IV+ LP++RQ+LLFSAT ++ D V + T +KQ+
Sbjct: 188 RIVNLLPKQRQNLLFSATFSNDIKKLARSFMKDPVTVEVARQNATAENVKQTVYRIEESE 247
Query: 614 HFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRI 673
+ HLLK+ +V++F +T S L L M ++ K Q R
Sbjct: 248 KNAAVEHLLKDR----NQEQVLIFSNTKAGASRLARQLERKGMKASAIHGDKTQAERMAT 303
Query: 674 SEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVL 733
E F++ ILV +DV+ARG+ ++ V+ +P E Y+HR+GRTGR G +GE +
Sbjct: 304 LEAFKSGSIDILVATDVAARGLHIEELPCVINFDLPFVAEDYVHRIGRTGRAGSKGEAIS 363
Query: 734 LLAPWEEYFLDDL-----KDLPLDKL----QLPHLNPE 762
L + +E L ++ + LPL+KL + H++PE
Sbjct: 364 LYSEKDERLLKEIEKLTKRQLPLEKLTDFEREKHVSPE 401
>gi|207346608|gb|EDZ73057.1| YDR194Cp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 664
Score = 204 bits (520), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 151/476 (31%), Positives = 246/476 (51%), Gaps = 39/476 (8%)
Query: 392 KALTAAGYIQMTRVQEATLSACL--EGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSST 449
KA+T + +T VQ+ T+ L E D + +AKTGTGK+ AFL+P + ++ S
Sbjct: 119 KAITRMEFPGLTPVQQKTIKPILSSEDHDVIARAKTGTGKTFAFLIPIFQHLINTKFDSQ 178
Query: 450 TQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGI---GVLTLVGGTRFKVDQRRLESD 506
+ +I+ PTR+LA QI AE + + G+ ++LVGGT F+ ++
Sbjct: 179 YM----VKAVIVAPTRDLALQIEAEVKKIHDMNYGLKKYACVSLVGGTDFRAAMNKMNKL 234
Query: 507 PCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRR 566
I++ATPGRL+D +E S R + K VLDEAD LL++GFR D+E I L +
Sbjct: 235 RPNIVIATPGRLIDVLEKYSNKFFRFVDYK--VLDEADRLLEIGFRDDLETISGILNEKN 292
Query: 567 -------QSLLFSATM-------PKELVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHE 612
++LLFSAT+ ++ K+E ++DTV E +I QS +++
Sbjct: 293 SKSADNIKTLLFSATLDDKVQKLANNIMNKKECLFLDTVDKNEPEAHERIDQSVVISEKF 352
Query: 613 LH--FQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLR-EMK--MNVREMYSRKPQ 667
+ F + H+ K+ +YK I+F T TS L +L+ E K + + E + + Q
Sbjct: 353 ANSIFAAVEHIKKQIKERDSNYKAIIFAPTVKFTSFLCSILKNEFKKDLPILEFHGKITQ 412
Query: 668 LYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGK 727
R + + F+ + ILV +DV ARGMD+P+V V+Q+G+P + YIHR+GRT R GK
Sbjct: 413 NKRTSLVKRFKKDESGILVCTDVGARGMDFPNVHEVLQIGVPSELANYIHRIGRTARSGK 472
Query: 728 EGEGVLLLAPWEEYF---LDDLKDLPLDKLQLPHLNPEIQLQMDNHMAKIDNNVKEAAYH 784
EG VL + E F L+D K++ + K + + EI+ ++ + + ++ +
Sbjct: 473 EGSSVLFICKDELPFVRELEDAKNIVIAKQEKYEPSEEIKSEVLEAVTEEPEDISDIVIS 532
Query: 785 AWLGYYNSIREI-GRDKTTLVELANKFAQSIGLQRPP---PLFRKTALKMGLKDIP 836
Y + I+E ++ L E+A+ + + L P P+ R+ K+GL P
Sbjct: 533 LISSYRSCIKEYRFSERRILPEIASTYG--VLLNDPQLKIPVSRRFLDKLGLSRSP 586
>gi|308068476|ref|YP_003870081.1| RNA helicase exp9 (Exported protein 9) [Paenibacillus polymyxa
E681]
gi|305857755|gb|ADM69543.1| Probable RNA helicase exp9 (Exported protein 9) [Paenibacillus
polymyxa E681]
Length = 529
Score = 204 bits (520), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 134/366 (36%), Positives = 198/366 (54%), Gaps = 28/366 (7%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F E + P I+A+T G+ + T +Q ++ L+G+D + +A+TGTGK+ AF +P I
Sbjct: 4 FAEFDLEPKVIQAITELGFEEATPIQSQSIPIALQGRDMIGQAQTGTGKTAAFGIPLINK 63
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+ ++ I LI+ PTRELA Q+A E I L G+ L + GG
Sbjct: 64 ISRSDEK--------IRALIMAPTRELAIQVAEE-IEKLSRFKGLRTLPIYGGQDIVRQI 114
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
R L+ P QI++ TPGRLLDHI K+ ++L + +VLDEAD +LD+GF +D+++I+
Sbjct: 115 RALKKKP-QIIIGTPGRLLDHINRKT---IKLEDVNTVVLDEADEMLDMGFMEDIQSILK 170
Query: 561 CLPRRRQSLLFSATMPK------ELVLKR-EHTYIDTVGLGSVETPVKIKQSCLVAPHEL 613
+P RQ++LFSATMP E LK EH +V V P+ I Q+ + P
Sbjct: 171 QVPDERQTMLFSATMPANIKRLAEQFLKNPEHV---SVIPKQVSAPL-IDQAYIEVPERQ 226
Query: 614 HFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRI 673
F+ L L+ + +P+ IVF T L L++ + ++ Q RD +
Sbjct: 227 KFEALSRLID---MESPEL-AIVFGRTKRRVDELAEALQKRGYSADGLHGDLSQNQRDAV 282
Query: 674 SEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVL 733
+FR +LV +DV+ARG+D VT VV +P D E Y+HR+GRTGR GKEGE
Sbjct: 283 MRKFRDGSIDVLVATDVAARGLDVSGVTHVVNFDLPQDPESYVHRIGRTGRAGKEGEAWS 342
Query: 734 LLAPWE 739
+ P E
Sbjct: 343 FVTPRE 348
>gi|116333167|ref|YP_794694.1| superfamily II DNA/RNA helicase [Lactobacillus brevis ATCC 367]
gi|116098514|gb|ABJ63663.1| Superfamily II DNA and RNA helicase [Lactobacillus brevis ATCC 367]
Length = 523
Score = 204 bits (520), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 136/379 (35%), Positives = 202/379 (53%), Gaps = 32/379 (8%)
Query: 380 RFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIE 439
+F E G+S +KA+T+ GY + T +Q T+ L G+D + +A+TGTGK+ AF LP +E
Sbjct: 2 KFKELGLSEDLLKAITSVGYEEATPIQAETIPMVLAGQDVIGQAQTGTGKTAAFALPILE 61
Query: 440 AVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVD 499
+ K+ + + L++ PTRELA Q E I L + V + GG +
Sbjct: 62 KIDKSNEN--------VQALVVSPTRELAIQ-TQEEIYKLGRTERANVQVVYGGADIRRQ 112
Query: 500 QRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIV 559
+ L++ P Q++V TPGRLLDHI + ++L ++MLVLDEAD +L++GF D+E+I+
Sbjct: 113 IKSLKNHP-QVVVGTPGRLLDHIRRHT---LKLDHVQMLVLDEADEMLNMGFLDDIEDII 168
Query: 560 DCLPRRRQSLLFSATMPKELVLKREHTYIDTVGLGSVETP--VKIKQSCLVAP------- 610
LP RQ++LFSATMP E I VG+ ++ P VKIK L
Sbjct: 169 KQLPEERQTMLFSATMPPE---------IKRVGVQFMKDPKHVKIKAKELTTDLIDQFYV 219
Query: 611 HELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYR 670
F+ + + + +PD IVF T + L N ++ Q R
Sbjct: 220 RSRDFEKFDVMTRFFDVQSPDL-TIVFTRTKRRVDEIASGLEARGYNAAGIHGDLTQKRR 278
Query: 671 DRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGE 730
+I +FR K ILV +DV+ARG+D DVT V IP D + Y+HR+GRTGR GK G
Sbjct: 279 TQIMNDFRHGKLDILVATDVAARGIDINDVTHVYNYDIPQDPDSYVHRVGRTGRAGKHGV 338
Query: 731 GVLLLAPWEEYFLDDLKDL 749
+ + P E +L +++ L
Sbjct: 339 SMTFVTPNEMDYLREIEKL 357
>gi|66911756|gb|AAH97636.1| Ddx10 protein [Xenopus laevis]
Length = 717
Score = 204 bits (520), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 141/458 (30%), Positives = 246/458 (53%), Gaps = 33/458 (7%)
Query: 379 KRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAI 438
+RF + +S T++ L A Y T +Q+ T+ L+GKD + AKTG+GK++AF++PA+
Sbjct: 74 ERFSDFPLSKKTLRGLVEAQYRLPTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFIIPAL 133
Query: 439 EAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKV 498
E + + +S L VLI+ PTRELA Q + +NH+ L ++GG K
Sbjct: 134 ECLYRQQWTSDDGL----GVLIISPTRELAYQTFEVLRKVGRNHEFSAGL-VIGGKDLKQ 188
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
+ + IL+ TPGRLL H++ S L MLVLDEAD +LD+GF + I
Sbjct: 189 ETACIHR--TNILICTPGRLLQHMDETSFFHAS--NLHMLVLDEADRILDMGFADTMNAI 244
Query: 559 VDCLPRRRQSLLFSATMPKEL-----VLKREHTYIDTVGLGSVETPVKIKQSCLVAPHEL 613
++ LP++RQ+LLFSAT K + + ++ Y+ TP ++Q+ +V +
Sbjct: 245 IENLPKKRQTLLFSATQTKSVKDLARLSLKDPAYVWVHEKAKFSTPATLEQNYIVCELQQ 304
Query: 614 HFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK--MNVREMYSRKPQLYRD 671
+L+ ++ H+ K IVF S+ L+ ++ + V ++ ++ Q R
Sbjct: 305 KINLLYSFIRNHL----KKKSIVFFSSCKEVQYLFRAFCRLRPGIPVLVLHGKQQQTKRM 360
Query: 672 RISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEG 731
+ +F K +L +D++ARG+D+P V+ V+Q+ P D YIHR+GRT R + GE
Sbjct: 361 EVYNDFIRKKSAVLFATDIAARGLDFPAVSWVLQLDCPEDANTYIHRVGRTARYKEGGEA 420
Query: 732 VLLLAPWEEYFLD---DLKDLPLDKLQLPHLNPE----IQLQMDNHMAKIDNNVKEAAYH 784
+L+L P E + + K +P+++++ +NPE +Q +++ +A+ + ++KE A
Sbjct: 421 LLVLLPSEVKGMAKQLEEKKVPINEIK---INPEKLLDVQGRLEAFLAQ-EQDLKETAQR 476
Query: 785 AWLGYYNSIREI-GRDKTTLVELA-NKFAQSIGLQRPP 820
++ Y S+ + ++ + +L +AQS+GL P
Sbjct: 477 CFVSYLRSVYLMKNKEVFDVFKLPLTPYAQSLGLAVAP 514
>gi|442611149|ref|ZP_21025855.1| ATP-dependent RNA helicase VCA0061 [Pseudoalteromonas luteoviolacea
B = ATCC 29581]
gi|441747077|emb|CCQ11917.1| ATP-dependent RNA helicase VCA0061 [Pseudoalteromonas luteoviolacea
B = ATCC 29581]
Length = 444
Score = 204 bits (520), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 136/397 (34%), Positives = 210/397 (52%), Gaps = 46/397 (11%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F + GI K L+ G ++ T +Q + L G D ++KTG+GK++AFLLPA++
Sbjct: 3 FTDLGIDNRLAKQLSHQGIVEPTEIQARAIPTALAGHDVFAQSKTGSGKTLAFLLPAVQR 62
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
V+K + S VL++ PTRELA+Q+ A+ L+ +H + V ++GG F
Sbjct: 63 VIKQKALSKRD----PRVLVVTPTRELANQVYAQCRMLIASHT-LSVTKILGGENFNDQV 117
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
+ L +P ++ TPGR+ DH+ +S ++L GL+ML+ DEAD +LDLGF+ ++ I +
Sbjct: 118 KALAKNP-HFVIGTPGRIADHLSQRS---MQLQGLEMLIFDEADRMLDLGFKAQLDAINE 173
Query: 561 CLPRR-RQSLLFSATM---------------PKELVLKREHTYIDTVGLGSVETPVKIKQ 604
R RQ+LLFSAT+ PK ++L H E I Q
Sbjct: 174 AADHRLRQTLLFSATLDHAEVGVTSRNLLKAPKSIMLSDAH-----------EKHEDITQ 222
Query: 605 SCLVAPHELHFQ-ILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYS 663
+ +A H H Q +L H +K +G + I+F +T TS L LL E ++N +
Sbjct: 223 TLYLADHLDHKQALLTHFMKSEAVG----QCIIFTATRSDTSRLSDLLNEQQLNAAALAG 278
Query: 664 RKPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTG 723
PQ R I + F + +LVT+DV++RG+D VT V+ +P E+Y+HR+GRTG
Sbjct: 279 DMPQNKRLEIMDAFSRGQFKVLVTTDVASRGLDLLSVTHVINFDLPKHAEEYVHRIGRTG 338
Query: 724 REGKEGEGVLLLAP--WEEYFL--DDLKDLPLDKLQL 756
R G +G + + P W+ Y LKD PL+ Q+
Sbjct: 339 RAGFKGTAISFVGPKDWKSYLAIQSYLKD-PLEFTQI 374
>gi|170691820|ref|ZP_02882984.1| DEAD/DEAH box helicase domain protein [Burkholderia graminis C4D1M]
gi|170143104|gb|EDT11268.1| DEAD/DEAH box helicase domain protein [Burkholderia graminis C4D1M]
Length = 493
Score = 204 bits (520), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 134/387 (34%), Positives = 211/387 (54%), Gaps = 17/387 (4%)
Query: 377 SQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLP 436
S FD+ G++P +KA+ +GY T +Q + L G+D + A+TGTGK+ +F LP
Sbjct: 9 STATFDQFGLAPDILKAVKESGYTTPTPIQAQAIPVVLAGRDVMGAAQTGTGKTASFSLP 68
Query: 437 AIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRF 496
I+ +L S+S + P+ LIL PTRELA Q+AA + K H + + GG
Sbjct: 69 IIQRLLPQASTSASPARHPVRALILTPTRELADQVAANVQSYAK-HTALRSAVVFGGVDM 127
Query: 497 KVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVE 556
+L +IL+ATPGRLLDH++ K+ L +++LVLDEAD +LD+GF D++
Sbjct: 128 NPQSEQLRRG-VEILIATPGRLLDHVQQKTA---NLGQVQILVLDEADRMLDMGFLPDLQ 183
Query: 557 NIVDCLPRRRQSLLFSATMPKELVLKREHTYI---DTVGLG-SVETPVKIKQSCLVAPHE 612
I++ LP+ RQ+LLFSAT E + K TY+ T+ + S T + Q
Sbjct: 184 RILNLLPKERQTLLFSATFSGE-IKKLAATYLRDPQTIEVARSNSTATNVTQIVYEVAEG 242
Query: 613 LHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDR 672
+ L++E L +VIVFC++ + S L L + ++ + Q R +
Sbjct: 243 DKTGAVVQLIRERSL----KQVIVFCNSKIGASRLARSLERDGVVATAIHGDRTQNERMQ 298
Query: 673 ISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGV 732
+ F+ + LV +DV+ARG+D ++ +V+ +P + E Y+HR+GRTGR G G+ +
Sbjct: 299 ALDAFKRGEIEALVATDVAARGLDIAELPAVINFDLPFNAEDYVHRIGRTGRAGASGDAL 358
Query: 733 LLLAPWEEYFLDDLKDL---PLDKLQL 756
L +P E L D++ L PL+ L+L
Sbjct: 359 SLCSPNERKQLADIEKLIKRPLEVLRL 385
>gi|383808644|ref|ZP_09964182.1| DEAD/DEAH box helicase / helicase C-terminal domain / DbpA RNA
binding domain multi-domain protein [Rothia aeria F0474]
gi|383448538|gb|EID51497.1| DEAD/DEAH box helicase / helicase C-terminal domain / DbpA RNA
binding domain multi-domain protein [Rothia aeria F0474]
Length = 699
Score = 204 bits (520), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 136/369 (36%), Positives = 197/369 (53%), Gaps = 17/369 (4%)
Query: 380 RFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIE 439
+F + G+ P + AL GY + + +QE T+ L+GKD V A+TGTGK+ AF LPA+
Sbjct: 99 KFTDLGLDPRVLSALEEVGYEKPSPIQEQTIPLLLDGKDVVGLAQTGTGKTAAFALPALS 158
Query: 440 AVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNH-DGIGVLTLVGGTRFKV 498
+ A + + VL+L PTRELA Q+A EA + H + VL + GG+ +
Sbjct: 159 RM--AELADINGVSRDTQVLVLAPTRELALQVA-EAFSSYATHMEDFTVLPIYGGSPYGP 215
Query: 499 DQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENI 558
L Q++V TPGR++DH+ NK L L L+ LVLDEAD +L +GF +DVE I
Sbjct: 216 QLAGLRRG-AQVVVGTPGRVIDHL-NKGSLD--LSNLQYLVLDEADEMLRMGFAEDVETI 271
Query: 559 VDCLPRRRQSLLFSATMPKELVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELHFQIL 618
++ P +Q LFSATMP + K Y++ E VK K + + + Q+
Sbjct: 272 LEGTPDAKQVALFSATMPSS-IRKIAQQYLN----DPTEVRVKTKTTTGANIRQRYMQVT 326
Query: 619 H-HLLKE--HILGTPDYK-VIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRIS 674
H H L +L +Y +IVF T T + L+ + PQ R+R
Sbjct: 327 HSHKLDAMTRVLEVENYDGIIVFVRTKKETEEVADKLKARGFQAAAINGDIPQQLRERTV 386
Query: 675 EEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLL 734
+ R + ILV +DV+ARG+D ++ VV IP D E Y+HR+GRTGR G++GE +L
Sbjct: 387 DALRDGRIDILVATDVAARGLDVERISLVVNYDIPHDTESYVHRIGRTGRAGRDGEAILF 446
Query: 735 LAPWEEYFL 743
+ P E Y L
Sbjct: 447 VTPRERYML 455
>gi|451823382|ref|YP_007459656.1| superfamily II DNA and RNA helicase [Candidatus
Kinetoplastibacterium desouzaii TCC079E]
gi|451776182|gb|AGF47223.1| superfamily II DNA and RNA helicase [Candidatus
Kinetoplastibacterium desouzaii TCC079E]
Length = 480
Score = 204 bits (520), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 131/365 (35%), Positives = 202/365 (55%), Gaps = 16/365 (4%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
F+ GI+P I A+ A G+ T VQ AT+ + +D VV A+TG+GK+ AF+LP +
Sbjct: 3 FENLGINPNIISAIKATGFESPTPVQNATIPKAILRQDLVVSAQTGSGKTAAFILPILNH 62
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+ + SS T I VLIL PTRELA QI A + N + + T+VGG ++
Sbjct: 63 LSQMPKSSNT----AIQVLILTPTRELAMQITKAASSYGSNFHWLRMATIVGGMPYQSQI 118
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
+ L S ILVATPGRL+D ++ SG V L + LVLDEAD +LD+GF +D++NIV
Sbjct: 119 KAL-SKRIDILVATPGRLIDQMQ--SG-RVNLKSVHTLVLDEADRMLDMGFIEDIQNIVS 174
Query: 561 CLPRRRQSLLFSATMPKEL--VLKREHTYIDTVGL-GSVETPVKIKQSCLVAPHELH-FQ 616
LP+ RQ++LFSAT+ + + K+ + + L + ++ I+Q + H +
Sbjct: 175 HLPKERQTMLFSATLDNSIMNLAKQMMNNPERISLTNNKQSHSNIEQKLIYVDDNHHKIR 234
Query: 617 ILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISEE 676
+L HLL ++ L + +VF ST L L ++ V ++ Q R R +
Sbjct: 235 VLQHLLNKNDLD----QAVVFTSTKRGADELANHLADIGFAVAALHGDMNQRQRTRTLAQ 290
Query: 677 FRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLLA 736
+ + IL+ +DV+ARG+D ++ + +P E YIHR+GRTGR G+ GE + L +
Sbjct: 291 LQKKQLKILIATDVAARGIDIQGISHAINFDLPMQAEDYIHRIGRTGRAGRNGEALTLAS 350
Query: 737 PWEEY 741
E++
Sbjct: 351 HSEKH 355
>gi|107023254|ref|YP_621581.1| DEAD/DEAH box helicase [Burkholderia cenocepacia AU 1054]
gi|116690337|ref|YP_835960.1| DEAD/DEAH box helicase domain-containing protein [Burkholderia
cenocepacia HI2424]
gi|170733675|ref|YP_001765622.1| DEAD/DEAH box helicase [Burkholderia cenocepacia MC0-3]
gi|105893443|gb|ABF76608.1| DEAD/DEAH box helicase-like protein [Burkholderia cenocepacia AU
1054]
gi|116648426|gb|ABK09067.1| DEAD/DEAH box helicase domain protein [Burkholderia cenocepacia
HI2424]
gi|169816917|gb|ACA91500.1| DEAD/DEAH box helicase domain protein [Burkholderia cenocepacia
MC0-3]
Length = 520
Score = 204 bits (520), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 135/380 (35%), Positives = 209/380 (55%), Gaps = 19/380 (5%)
Query: 381 FDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIEA 440
FD+ G++P +KA+ GY T +Q + L G+D + A+TGTGK+ +F LP I+
Sbjct: 35 FDQFGLAPDILKAIVEQGYTTPTPIQAQAIPVVLAGRDVMGAAQTGTGKTASFSLPIIQR 94
Query: 441 VLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVDQ 500
+L ++S + P+ LIL PTRELA Q+AA A K H + + GG
Sbjct: 95 LLPQANTSASPARHPVRALILTPTRELADQVAANVHAYAK-HTPLRSAVVFGGVDMNPQS 153
Query: 501 RRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVD 560
L +IL+ATPGRLLDH++ K+ L +++LVLDEAD +LD+GF D++ I++
Sbjct: 154 AELRRG-VEILIATPGRLLDHVQQKTA---NLGQVQILVLDEADRMLDMGFLPDLQRILN 209
Query: 561 CLPRRRQSLLFSATMPKELVLKREHTYI---DTVGLG-SVETPVKIKQSCL-VAPHELHF 615
LP+ RQ+LLFSAT E + K TY+ T+ + S T + Q VA +
Sbjct: 210 LLPKERQTLLFSATFSGE-IKKLASTYLRNPQTIEVARSNSTNANVTQIVYDVAEGDKQA 268
Query: 616 QILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLYRDRISE 675
++ LL++ L +VIVFC++ + S L L + ++ K Q+ R + +
Sbjct: 269 AVV-QLLRDRGL----KQVIVFCNSKIGASRLARNLERDGVVASAIHGDKTQIERMQALD 323
Query: 676 EFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGVLLL 735
F+ + LV +DV+ARG+D ++ +V+ +P E Y+HR+GRTGR G G+ + L
Sbjct: 324 AFKRGEIEALVATDVAARGLDIAELPAVINFDLPFSAEDYVHRIGRTGRAGATGDALSLC 383
Query: 736 APWEEYFLDDLKDL---PLD 752
+P E L D++ L PLD
Sbjct: 384 SPNERKQLADIEKLIKRPLD 403
>gi|409047652|gb|EKM57131.1| hypothetical protein PHACADRAFT_119388 [Phanerochaete carnosa
HHB-10118-sp]
Length = 780
Score = 204 bits (520), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 148/467 (31%), Positives = 239/467 (51%), Gaps = 34/467 (7%)
Query: 373 EPILSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIA 432
EP ++ K F + IS LT + L A ++ MT +Q +L A L GKD + A+TG+GK++A
Sbjct: 46 EPPINLKVFADLPISDLTKRGLKKASFVDMTDIQVKSLPASLRGKDVLGAARTGSGKTLA 105
Query: 433 FLLPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVG 492
FL P +E + + L LI+ PTRELA QI E + + + ++G
Sbjct: 106 FLTPVLEVLYRRKWGPQDGL----GALIISPTRELAVQIF-EVLRSIGGYHTFSAGLIIG 160
Query: 493 GTRFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFR 552
G K ++ RL ILVATPGRLL H++ G L+MLVLDEAD +LD+GF
Sbjct: 161 GKNLKDERDRLTR--MNILVATPGRLLQHMDQTVGFECD--NLQMLVLDEADRILDMGFH 216
Query: 553 KDVENIVDCLPRRRQSLLFSATMPKELVLKREHTYIDTVGLGSVE------TPVKIKQSC 606
K + ++ LP+ RQ+LLFSAT K + + D V + + E P ++Q
Sbjct: 217 KTLTALLSHLPKSRQTLLFSATQTKSVTDLARLSLKDPVYISTQEEEASGVMPKSLEQHH 276
Query: 607 LVAPHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK--MNVREMYSR 664
+V + +L +K H+ K +VF S ++ +M + + +++ +
Sbjct: 277 VVVDLDKKLDVLWSFIKTHL----QTKTLVFMSCCKQVRFVFETFCKMHPGIPLLQLHGK 332
Query: 665 KPQLYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGR 724
+ Q+ R + F + + +L+ +D++ARG+D+P V V+QV P D E YIHR+GRT R
Sbjct: 333 QKQMSRLATFQRFTSIRHAVLLATDIAARGLDFPAVDWVLQVDAPEDAETYIHRVGRTAR 392
Query: 725 EGKEGEGVLLLAPWEEYFLDDL---KDLPLDKLQLPHLNPEIQLQMDNHMAKI---DNNV 778
G+ +L LAP EE + K + K+++ + N K+ D ++
Sbjct: 393 YESAGKALLFLAPSEEEGMKAALAKKGIEAAKIKIKASKTH---SVQNQFQKLCFEDPDI 449
Query: 779 KEAAYHAWLGYYNSIREIGRDKTT--LVEL-ANKFAQSIGLQRPPPL 822
K A++ Y S+ I +DK+ L EL ++A+++GL P +
Sbjct: 450 KYLGQRAFVSYLRSVH-IMKDKSIFKLEELPVQRYAEALGLPGAPKI 495
>gi|307352826|ref|YP_003893877.1| DEAD/DEAH box helicase domain-containing protein [Methanoplanus
petrolearius DSM 11571]
gi|307156059|gb|ADN35439.1| DEAD/DEAH box helicase domain protein [Methanoplanus petrolearius
DSM 11571]
Length = 536
Score = 204 bits (520), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 131/380 (34%), Positives = 209/380 (55%), Gaps = 23/380 (6%)
Query: 375 ILSQKRFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFL 434
++S +F+E ISP ++A+ G+ + T +Q+ ++ L G+D +A+TGTGK+ AF
Sbjct: 1 MVSFLKFNELNISPEILRAIEDMGFEEPTPIQQRSIPLILSGRDVTGQAQTGTGKTAAFA 60
Query: 435 LPAIEAVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGT 494
+P IE + S + ++L PTREL QI+ E LLK I VL + GG
Sbjct: 61 IPLIEKIEPEKCSVQS--------IVLSPTRELTIQISEEFNRLLKYRKDIRVLPVYGGQ 112
Query: 495 RFKVDQRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKD 554
+ L+ I++ TPGR++DH+ K G ++ L G+K +VLDEAD +L++GFR+D
Sbjct: 113 AIERQLHELKKG-VHIIIGTPGRVMDHM--KRG-TLSLSGIKTVVLDEADQMLEMGFRED 168
Query: 555 VENIVDCLPRRRQSLLFSATMPKELV-----LKREHTYIDTVGLGSVETPVKIKQSCLVA 609
+E I+ P RQ++LFSATMPK ++ +++ ++ T+ G + P+ I+Q L
Sbjct: 169 MEEILSKAPGERQTILFSATMPKPILKISKSFQKKPEFV-TINPGQLTVPL-IEQKYLEV 226
Query: 610 PHELHFQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMKMNVREMYSRKPQLY 669
+ ++L L+ + + D +I FC+T L +LR ++ Q
Sbjct: 227 REKDKLEVLCRLID---INSSDLSMI-FCNTKKAVDELSEMLRSRGYFAEGLHGDMKQQQ 282
Query: 670 RDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEG 729
RDR+ FR+ IL+ +DV+ARG+D D+ V +P D E YIHR+GRTGR GK G
Sbjct: 283 RDRVMSRFRSGSIDILIATDVAARGIDIDDIDVVYNYDVPQDVEYYIHRIGRTGRAGKSG 342
Query: 730 EGVLLLAPWEEYFLDDLKDL 749
++P E Y L +K +
Sbjct: 343 MSYTFVSPKEIYKLRMIKKI 362
>gi|156717218|ref|NP_001096151.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 10 [Xenopus (Silurana)
tropicalis]
gi|148921499|gb|AAI46616.1| ddx10 protein [Xenopus (Silurana) tropicalis]
Length = 852
Score = 204 bits (520), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 141/457 (30%), Positives = 247/457 (54%), Gaps = 33/457 (7%)
Query: 380 RFDECGISPLTIKALTAAGYIQMTRVQEATLSACLEGKDAVVKAKTGTGKSIAFLLPAIE 439
+F + +S T++ L Y T +Q+ T+ L+GKD + AKTG+GK++AF++PA+E
Sbjct: 74 KFSDFPLSKKTLRGLVEGQYRLPTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFIIPALE 133
Query: 440 AVLKATSSSTTQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGIGVLTLVGGTRFKVD 499
+ + +S L VLI+ PTRELA Q + +NH+ L ++GG K +
Sbjct: 134 CLYRQQWTSDDGL----GVLIISPTRELAYQTFEVLRKVGRNHEFSAGL-VIGGKDLKQE 188
Query: 500 QRRLESDPCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIV 559
+ IL+ TPGRLL H++ S + L+MLVLDEAD +LD+GF + IV
Sbjct: 189 TACIHR--TNILICTPGRLLQHMDETS--TFHASNLQMLVLDEADRILDMGFADTMNAIV 244
Query: 560 DCLPRRRQSLLFSATMPKEL-----VLKREHTYIDTVGLGSVETPVKIKQSCLVAPHELH 614
+ LP++RQ+LLFSAT K + + ++ Y+ TP ++Q+ +V +
Sbjct: 245 ENLPKKRQTLLFSATQTKSVKDLARLSLKDPEYVWVHENAKFSTPATLEQNYVVCELQQK 304
Query: 615 FQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLREMK--MNVREMYSRKPQLYRDR 672
+L+ ++ H+ K IVF S+ L+ ++ + V ++ ++ Q+ R
Sbjct: 305 INLLYSFIRNHL----KKKSIVFFSSCKEVQYLFRAFCRLRPGIPVLVLHGKQQQMKRME 360
Query: 673 ISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGKEGEGV 732
+ +F K +L +D++ARG+D+P V V+Q+ P D YIHR+GRT R + GE +
Sbjct: 361 VYNDFIRKKSAVLFATDIAARGLDFPAVNWVLQLDCPEDANTYIHRVGRTARYKEGGEAL 420
Query: 733 LLLAPWE-EYFLDDL--KDLPLDKLQLPHLNPE----IQLQMDNHMAKIDNNVKEAAYHA 785
L+L P E + L K +P+++++ +NPE +Q +++ +A+ + ++KE A
Sbjct: 421 LVLLPSEVKGMFKQLEEKKVPINEIK---INPEKLMDVQGRLEAFLAQ-EQDLKETAQRC 476
Query: 786 WLGYYNSIREI-GRDKTTLVELA-NKFAQSIGLQRPP 820
++ Y S+ + ++ + +L ++AQS+GL P
Sbjct: 477 FVSYLRSVYLMKNKEVFDVFKLPLTQYAQSLGLAVAP 513
>gi|349577255|dbj|GAA22424.1| K7_Mss116p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 664
Score = 204 bits (520), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 151/476 (31%), Positives = 246/476 (51%), Gaps = 39/476 (8%)
Query: 392 KALTAAGYIQMTRVQEATLSACL--EGKDAVVKAKTGTGKSIAFLLPAIEAVLKATSSST 449
KA+T + +T VQ+ T+ L E D + +AKTGTGK+ AFL+P + ++ S
Sbjct: 119 KAITRMEFPGLTPVQQKTIKPILSSEDHDVIARAKTGTGKTFAFLIPIFQHLINTKFDSQ 178
Query: 450 TQLVPPIYVLILCPTRELASQIAAEAIALLKNHDGI---GVLTLVGGTRFKVDQRRLESD 506
+ +I+ PTR+LA QI AE + + G+ ++LVGGT F+ ++
Sbjct: 179 YM----VKAVIVAPTRDLALQIEAEVKKIHDMNYGLKKYACVSLVGGTDFRAAMNKMNKL 234
Query: 507 PCQILVATPGRLLDHIENKSGLSVRLMGLKMLVLDEADHLLDLGFRKDVENIVDCLPRRR 566
I++ATPGRL+D +E S R + K VLDEAD LL++GFR D+E I L +
Sbjct: 235 RPNIVIATPGRLIDVLEKYSNKFFRFVDYK--VLDEADRLLEIGFRDDLETISGILNEKN 292
Query: 567 -------QSLLFSATM-------PKELVLKREHTYIDTVGLGSVETPVKIKQSCLVAPHE 612
++LLFSAT+ ++ K+E ++DTV E +I QS +++
Sbjct: 293 SKSADNIKTLLFSATLDDKVQKLANNIMNKKECLFLDTVDKNEPEAHERIDQSVVISEKF 352
Query: 613 LH--FQILHHLLKEHILGTPDYKVIVFCSTGMVTSLLYLLLR-EMK--MNVREMYSRKPQ 667
+ F + H+ K+ +YK I+F T TS L +L+ E K + + E + + Q
Sbjct: 353 ANSIFAAVEHIKKQIKERDSNYKAIIFAPTVKFTSFLCSILKNEFKKDLPILEFHGKITQ 412
Query: 668 LYRDRISEEFRASKRLILVTSDVSARGMDYPDVTSVVQVGIPPDREQYIHRLGRTGREGK 727
R + + F+ + ILV +DV ARGMD+P+V V+Q+G+P + YIHR+GRT R GK
Sbjct: 413 NKRTSLVKRFKKDESGILVCTDVGARGMDFPNVHEVLQIGVPSELANYIHRIGRTARSGK 472
Query: 728 EGEGVLLLAPWEEYF---LDDLKDLPLDKLQLPHLNPEIQLQMDNHMAKIDNNVKEAAYH 784
EG VL + E F L+D K++ + K + + EI+ ++ + + ++ +
Sbjct: 473 EGSSVLFICKDELPFVRELEDAKNIVIAKQEKYEPSEEIKSEVLEAVTEEPEDISDIVIS 532
Query: 785 AWLGYYNSIREI-GRDKTTLVELANKFAQSIGLQRPP---PLFRKTALKMGLKDIP 836
Y + I+E ++ L E+A+ + + L P P+ R+ K+GL P
Sbjct: 533 LISSYRSCIKEYRFSERRILPEIASTYG--VLLNDPQLKIPVSRRFLDKLGLSRSP 586
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.316 0.134 0.385
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,079,343,107
Number of Sequences: 23463169
Number of extensions: 571506623
Number of successful extensions: 2369169
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 29005
Number of HSP's successfully gapped in prelim test: 5220
Number of HSP's that attempted gapping in prelim test: 2220060
Number of HSP's gapped (non-prelim): 55599
length of query: 842
length of database: 8,064,228,071
effective HSP length: 151
effective length of query: 691
effective length of database: 8,816,256,848
effective search space: 6092033481968
effective search space used: 6092033481968
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 82 (36.2 bits)