BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 003183
(841 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2DFS|A Chain A, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|M Chain M, 3-D Structure Of Myosin-V Inhibited State
Length = 1080
Score = 149 bits (375), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 95/275 (34%), Positives = 155/275 (56%), Gaps = 16/275 (5%)
Query: 8 FLTVYGII-----VSSDEVTACKRLLEKVGLEG--YQIGKTKVFLRAGQMADLDARRTEV 60
F + Y ++ V SD CK +LEK+ L+ YQ GKTK+F RAGQ+A L+ R +
Sbjct: 707 FFSRYRVLMKQKDVLSDRKQTCKNVLEKLILDKDKYQFGKTKIFFRAGQVAYLEKIRADK 766
Query: 61 LGRSASIIQRKVRSYLSRKNYIMLRRSAIHIQAACRGQLARTVYESMRREASCLRIQRDL 120
L + IQ+ +R +L RK Y+ +RR+AI IQ RG AR +RR + + IQ+
Sbjct: 767 LRAACIRIQKTIRGWLMRKKYMRMRRAAITIQRYVRGHQARCYATFLRRTRAAIIIQKFQ 826
Query: 121 RMYLAKKAYKDMCFSAVCIQTGMRGMAARNELRFRRQTRASILIQSHCRKYLARLHYMKL 180
RMY+ +K Y+ M + + +Q +RG RN+ + + SI+IQ H R +LAR+HY +
Sbjct: 827 RMYVVRKRYQCMRDATIALQALLRGYLVRNKYQMMLREHKSIIIQKHVRGWLARVHYHRT 886
Query: 181 KKAAITTQCAWRGKVARRELRKLKMAARETGALQAAKNKLEKQVEELTWRLQ-------- 232
KA + QC +R +A+REL+KLK+ AR + LE ++ +L ++
Sbjct: 887 LKAIVYLQCCYRRMMAKRELKKLKIEARSVERYKKLHIGLENKIMQLQRKIDEQNKEYKS 946
Query: 233 LEKRMRVDMEEAKTQENAKLQSALQEMQLQFKESK 267
L ++M ++E + E KL+S ++ +++ +E+K
Sbjct: 947 LLEKMN-NLEITYSTETEKLRSDVERLRMSEEEAK 980
>pdb|1OE9|A Chain A, Crystal Structure Of Myosin V Motor With Essential Light
Chain - Nucleotide-Free
pdb|1W7I|A Chain A, Crystal Structure Of Myosin V Motor Without Nucleotide
Soaked In 10 Mm Mgadp
pdb|1W7J|A Chain A, Crystal Structure Of Myosin V Motor With Essential Light
Chain + Adp-Befx - Near Rigor
Length = 795
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 49/75 (65%), Gaps = 4/75 (5%)
Query: 16 VSSDEVTACKRLLEKVGLEG--YQIGKTKVFLRAGQMADLDARRTEVLGRSASI-IQRKV 72
V SD CK +LEK+ L+ YQ GKTK+F RAGQ+A L+ R + L R+A I IQ+ +
Sbjct: 720 VLSDRKQTCKNVLEKLILDKDKYQFGKTKIFFRAGQVAYLEKIRADKL-RAACIRIQKTI 778
Query: 73 RSYLSRKNYIMLRRS 87
R +L RK Y+ +RR
Sbjct: 779 RGWLMRKKYMRMRRG 793
>pdb|2OS8|A Chain A, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
pdb|2OTG|A Chain A, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
Length = 840
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 43/80 (53%), Gaps = 2/80 (2%)
Query: 19 DEVTACKRLLEKVGLEG--YQIGKTKVFLRAGQMADLDARRTEVLGRSASIIQRKVRSYL 76
D T +++L + ++ Y++G TKVF +AG + +L+ R E L + S+ Q +R YL
Sbjct: 736 DGKTVSEKILTGLQMDPSEYRLGTTKVFFKAGVLGNLEEMRDERLSKIISMFQAHIRGYL 795
Query: 77 SRKNYIMLRRSAIHIQAACR 96
RK Y L+ I + R
Sbjct: 796 IRKAYKKLQDQRIGLSVIQR 815
>pdb|2EC6|A Chain A, Placopecten Striated Muscle Myosin Ii
Length = 838
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 43/80 (53%), Gaps = 2/80 (2%)
Query: 19 DEVTACKRLLEKVGLEG--YQIGKTKVFLRAGQMADLDARRTEVLGRSASIIQRKVRSYL 76
D T +++L + ++ Y++G TKVF +AG + +L+ R E L + S+ Q +R YL
Sbjct: 737 DGKTVSEKILTGLQMDPSEYRLGTTKVFFKAGVLGNLEEMRDERLSKIISMFQAHIRGYL 796
Query: 77 SRKNYIMLRRSAIHIQAACR 96
RK Y L+ I + R
Sbjct: 797 IRKAYKKLQDQRIGLSVIQR 816
>pdb|1QVI|A Chain A, Crystal Structure Of Scallop Myosin S1 In The Pre-Power
Stroke State To 2.6 Angstrom Resolution: Flexibility And
Function In The Head
pdb|1S5G|A Chain A, Structure Of Scallop Myosin S1 Reveals A Novel Nucleotide
Conformation
pdb|1SR6|A Chain A, Structure Of Nucleotide-free Scallop Myosin S1
Length = 840
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 43/80 (53%), Gaps = 2/80 (2%)
Query: 19 DEVTACKRLLEKVGLEG--YQIGKTKVFLRAGQMADLDARRTEVLGRSASIIQRKVRSYL 76
D T +++L + ++ Y++G TKVF +AG + +L+ R E L + S+ Q +R YL
Sbjct: 734 DGKTVSEKILAGLQMDPAEYRLGTTKVFFKAGVLGNLEEMRDERLSKIISMFQAHIRGYL 793
Query: 77 SRKNYIMLRRSAIHIQAACR 96
RK Y L+ I + R
Sbjct: 794 IRKAYKKLQDQRIGLSVIQR 813
>pdb|1DFL|A Chain A, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
pdb|1DFL|B Chain B, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
pdb|2W4T|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4V|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
pdb|2W4W|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
Length = 831
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 43/80 (53%), Gaps = 2/80 (2%)
Query: 19 DEVTACKRLLEKVGLEG--YQIGKTKVFLRAGQMADLDARRTEVLGRSASIIQRKVRSYL 76
D T +++L + ++ Y++G TKVF +AG + +L+ R E L + S+ Q +R YL
Sbjct: 730 DGKTVSEKILAGLQMDPAEYRLGTTKVFFKAGVLGNLEEMRDERLSKIISMFQAHIRGYL 789
Query: 77 SRKNYIMLRRSAIHIQAACR 96
RK Y L+ I + R
Sbjct: 790 IRKAYKKLQDQRIGLSVIQR 809
>pdb|1B7T|A Chain A, Myosin Digested By Papain
pdb|1L2O|A Chain A, Scallop Myosin S1-Adp-P-Pdm In The Actin-Detached
Conformation
pdb|1KQM|A Chain A, Scallop Myosin S1-Amppnp In The Actin-Detached
Conformation
pdb|1KWO|A Chain A, Scallop Myosin S1-Atpgammas-P-Pdm In The Actin-Detached
Conformation
Length = 835
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 34/61 (55%)
Query: 36 YQIGKTKVFLRAGQMADLDARRTEVLGRSASIIQRKVRSYLSRKNYIMLRRSAIHIQAAC 95
Y++G TKVF +AG + +L+ R E L + S+ Q +R YL RK Y L+ I +
Sbjct: 753 YRLGTTKVFFKAGVLGNLEEMRDERLSKIISMFQAHIRGYLIRKAYKKLQDQRIGLSVIQ 812
Query: 96 R 96
R
Sbjct: 813 R 813
>pdb|1DFK|A Chain A, Nucleotide-Free Scallop Myosin S1-Near Rigor State
Length = 830
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 43/80 (53%), Gaps = 2/80 (2%)
Query: 19 DEVTACKRLLEKVGLEG--YQIGKTKVFLRAGQMADLDARRTEVLGRSASIIQRKVRSYL 76
D T +++L + ++ Y++G TKVF +AG + +L+ R E L + S+ Q +R YL
Sbjct: 729 DGKTVSEKILAGLQMDPAEYRLGTTKVFFKAGVLGNLEEMRDERLSKIISMFQAHIRGYL 788
Query: 77 SRKNYIMLRRSAIHIQAACR 96
RK Y L+ I + R
Sbjct: 789 IRKAYKKLQDQRIGLSVIQR 808
>pdb|1KK7|A Chain A, Scallop Myosin In The Near Rigor Conformation
pdb|1KK8|A Chain A, Scallop Myosin (S1-Adp-Befx) In The Actin-Detached
Conformation
Length = 837
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 43/80 (53%), Gaps = 2/80 (2%)
Query: 19 DEVTACKRLLEKVGLEG--YQIGKTKVFLRAGQMADLDARRTEVLGRSASIIQRKVRSYL 76
D T +++L + ++ Y++G TKVF +AG + +L+ R E L + S+ Q +R YL
Sbjct: 734 DGKTVSEKILAGLQMDPAEYRLGTTKVFFKAGVLGNLEEMRDERLSKIISMFQAHIRGYL 793
Query: 77 SRKNYIMLRRSAIHIQAACR 96
RK Y L+ I + R
Sbjct: 794 IRKAYKKLQDQRIGLSVIQR 813
>pdb|3I5G|A Chain A, Crystal Structure Of Rigor-Like Squid Myosin S1
pdb|3I5H|A Chain A, The Crystal Structure Of Rigor Like Squid Myosin S1 In The
Absence Of Nucleotide
pdb|3I5I|A Chain A, The Crystal Structure Of Squid Myosin S1 In The Presence
Of So4 2-
pdb|3I5F|A Chain A, Crystal Structure Of Squid Mg.Adp Myosin S1
Length = 839
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 32/56 (57%)
Query: 36 YQIGKTKVFLRAGQMADLDARRTEVLGRSASIIQRKVRSYLSRKNYIMLRRSAIHI 91
Y++G TKVF +AG + L+ R E L + S+ Q +R YL RK Y L+ I +
Sbjct: 755 YRLGNTKVFFKAGVLGMLEDMRDERLSKIISMFQAHIRGYLMRKAYKKLQDQRIGL 810
>pdb|1W8J|A Chain A, Crystal Structure Of Myosin V Motor Domain -
Nucleotide-Free
pdb|1W8J|B Chain B, Crystal Structure Of Myosin V Motor Domain -
Nucleotide-Free
pdb|1W8J|C Chain C, Crystal Structure Of Myosin V Motor Domain -
Nucleotide-Free
pdb|1W8J|D Chain D, Crystal Structure Of Myosin V Motor Domain -
Nucleotide-Free
Length = 766
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 30/46 (65%), Gaps = 2/46 (4%)
Query: 16 VSSDEVTACKRLLEKVGLEG--YQIGKTKVFLRAGQMADLDARRTE 59
V SD CK +LEK+ L+ YQ GKTK+F RAGQ+A L+ R +
Sbjct: 720 VLSDRKQTCKNVLEKLILDKDKYQFGKTKIFFRAGQVAYLEKIRAD 765
>pdb|2IX7|C Chain C, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
Length = 58
Score = 39.7 bits (91), Expect = 0.006, Method: Composition-based stats.
Identities = 20/51 (39%), Positives = 34/51 (66%)
Query: 111 ASCLRIQRDLRMYLAKKAYKDMCFSAVCIQTGMRGMAARNELRFRRQTRAS 161
A+C+RIQ+ +R +L +K Y M +A+ +Q +RG AR +F R+T+A+
Sbjct: 6 AACIRIQKTIRGWLLRKRYLCMQRAAITVQRYVRGYQARCYAKFLRRTKAA 56
Score = 36.2 bits (82), Expect = 0.072, Method: Composition-based stats.
Identities = 20/48 (41%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Query: 63 RSASI-IQRKVRSYLSRKNYIMLRRSAIHIQAACRGQLARTVYESMRR 109
R+A I IQ+ +R +L RK Y+ ++R+AI +Q RG AR + +RR
Sbjct: 5 RAACIRIQKTIRGWLLRKRYLCMQRAAITVQRYVRGYQARCYAKFLRR 52
>pdb|2BKI|A Chain A, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
Length = 858
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 60/131 (45%), Gaps = 11/131 (8%)
Query: 24 CKRLLEKVGLE--GYQIGKTKVFLRAGQMADLDARRTEVLGRSASIIQRKVRSYLSRKNY 81
CK L + +GL Y+ G TKVF R G+ A+ D A +++R V +L
Sbjct: 735 CKALFKALGLNEIDYKFGLTKVFFRPGKFAEFDQIMKSDPDHLAELVKR-VNHWL----- 788
Query: 82 IMLRRSAIHIQAACRGQLARTVYESMRREASCLRIQRDLRMYLAKKAYKDMCFSAVCIQT 141
I R + C + + + R +C+++Q+ +RM+L K+ +K V + T
Sbjct: 789 ICSRWKKVQ---WCSLSVIKLKNKIKYRAEACIKMQKTIRMWLCKRRHKPRIDGLVKVGT 845
Query: 142 GMRGMAARNEL 152
+ + NE+
Sbjct: 846 LKKRLDKFNEV 856
>pdb|2W4A|M Chain M, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4G|M Chain M, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
pdb|2W4H|M Chain M, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
Length = 840
Score = 38.9 bits (89), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 52/118 (44%), Gaps = 28/118 (23%)
Query: 19 DEVTACKRLLEKVGLEG--YQIGKTKVFLRAGQMADLDARRTEVLGRSASIIQRKVRSYL 76
D A ++LL + ++ Y+ G TKVF +AG + L+ R + L A II R
Sbjct: 736 DSKKASEKLLGSIDVDHTQYRFGHTKVFFKAGLLGLLEEMRDDKL---AEIITR------ 786
Query: 77 SRKNYIMLRRSAIHIQAACRGQLARTVYESM--RREASCLRIQRDLRMYLAKKAYKDM 132
QA CRG L R Y M RRE S IQ ++R ++ K + M
Sbjct: 787 --------------TQARCRGFLMRVEYRRMVERRE-SIFCIQYNVRSFMNVKHWPWM 829
>pdb|3J04|A Chain A, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
pdb|3J04|D Chain D, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
Length = 909
Score = 38.5 bits (88), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 49/109 (44%), Gaps = 26/109 (23%)
Query: 19 DEVTACKRLLEKVGLEG--YQIGKTKVFLRAGQMADLDARRTEVLGRSASIIQRKVRSYL 76
D AC +++ + L+ Y+IG++K+F R G +A L+ R
Sbjct: 747 DGKQACILMIKALELDPNLYRIGQSKIFFRTGVLAHLEEERD------------------ 788
Query: 77 SRKNYIMLRRSAIHIQAACRGQLARTVYESMRREASCLR-IQRDLRMYL 124
+ + I QA CRG LAR + +++ + ++ IQR+ YL
Sbjct: 789 -----LKITDVIIAFQAQCRGYLARKAFAKRQQQLTAMKVIQRNCAAYL 832
>pdb|3DTP|B Chain B, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
Length = 973
Score = 38.5 bits (88), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 49/109 (44%), Gaps = 26/109 (23%)
Query: 19 DEVTACKRLLEKVGLEG--YQIGKTKVFLRAGQMADLDARRTEVLGRSASIIQRKVRSYL 76
D AC +++ + L+ Y+IG++K+F R G +A L+ R
Sbjct: 747 DGKQACILMIKALELDPNLYRIGQSKIFFRTGVLAHLEEERD------------------ 788
Query: 77 SRKNYIMLRRSAIHIQAACRGQLARTVYESMRREASCLR-IQRDLRMYL 124
+ + I QA CRG LAR + +++ + ++ IQR+ YL
Sbjct: 789 -----LKITDVIIAFQAQCRGYLARKAFAKRQQQLTAMKVIQRNCAAYL 832
Score = 29.6 bits (65), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 85/201 (42%), Gaps = 15/201 (7%)
Query: 135 SAVCIQTGMRGMAARNELRFRRQTRASILIQSHCRKYLARLHYMKLKKAAITTQCAWRGK 194
S + +TG+ +A E R + T I Q+ CR YLAR + K ++ + R
Sbjct: 771 SKIFFRTGV--LAHLEEERDLKITDVIIAFQAQCRGYLARKAFAKRQQQLTAMKVIQRNC 828
Query: 195 VARRELRKL---KMAARETGALQAAKNKLE--KQVEELTWRLQ--LEKR--MRVDMEEAK 245
A +LR ++ + LQ+A+ + E EE T RL+ LEK R ++EE
Sbjct: 829 AAYLKLRNWQWWRLFTKVKPLLQSAEREKEMASMKEEFT-RLKEALEKSEARRKELEEKM 887
Query: 246 T---QENAKLQSALQEMQLQFKESKEKLMXXXXXXXXXXXXXXXXXXXXXXDHAVVEELT 302
QE LQ +Q Q +++E+ + + ELT
Sbjct: 888 VSLLQEKNDLQLQVQAEQDNLADAEERCDQLIKNKIQLEAKVKEMNERLEDEEEMNAELT 947
Query: 303 SENEKLKTLVSSLEKKIDETE 323
++ KL+ S L++ ID+ E
Sbjct: 948 AKKRKLEDECSELKRDIDDLE 968
>pdb|3DTP|A Chain A, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
Length = 971
Score = 38.5 bits (88), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 49/109 (44%), Gaps = 26/109 (23%)
Query: 19 DEVTACKRLLEKVGLEG--YQIGKTKVFLRAGQMADLDARRTEVLGRSASIIQRKVRSYL 76
D AC +++ + L+ Y+IG++K+F R G +A L+ R
Sbjct: 747 DGKQACILMIKALELDPNLYRIGQSKIFFRTGVLAHLEEERD------------------ 788
Query: 77 SRKNYIMLRRSAIHIQAACRGQLARTVYESMRREASCLR-IQRDLRMYL 124
+ + I QA CRG LAR + +++ + ++ IQR+ YL
Sbjct: 789 -----LKITDVIIAFQAQCRGYLARKAFAKRQQQLTAMKVIQRNCAAYL 832
Score = 29.6 bits (65), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 85/201 (42%), Gaps = 15/201 (7%)
Query: 135 SAVCIQTGMRGMAARNELRFRRQTRASILIQSHCRKYLARLHYMKLKKAAITTQCAWRGK 194
S + +TG+ +A E R + T I Q+ CR YLAR + K ++ + R
Sbjct: 771 SKIFFRTGV--LAHLEEERDLKITDVIIAFQAQCRGYLARKAFAKRQQQLTAMKVIQRNC 828
Query: 195 VARRELRKL---KMAARETGALQAAKNKLE--KQVEELTWRLQ--LEKR--MRVDMEEAK 245
A +LR ++ + LQ+A+ + E EE T RL+ LEK R ++EE
Sbjct: 829 AAYLKLRNWQWWRLFTKVKPLLQSAEREKEMASMKEEFT-RLKEALEKSEARRKELEEKM 887
Query: 246 T---QENAKLQSALQEMQLQFKESKEKLMXXXXXXXXXXXXXXXXXXXXXXDHAVVEELT 302
QE LQ +Q Q +++E+ + + ELT
Sbjct: 888 VSLLQEKNDLQLQVQAEQDNLADAEERCDQLIKNKIQLEAKVKEMNERLEDEEEMNAELT 947
Query: 303 SENEKLKTLVSSLEKKIDETE 323
++ KL+ S L++ ID+ E
Sbjct: 948 AKKRKLEDECSELKRDIDDLE 968
>pdb|2F6H|X Chain X, Myosin V Cargo Binding Domain
Length = 419
Score = 36.6 bits (83), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 28/125 (22%), Positives = 56/125 (44%), Gaps = 4/125 (3%)
Query: 638 IIDSLNTLLSTLKQNFVPPVLVQKIFTQTFSYINVQLFNSLLLRRECCTFSNGEYVKAGL 697
I+ N++ +K + + + T +Y++ FN L+++R ++ G + +
Sbjct: 207 ILTFFNSIYWCMKSFHIENEVFHAVVTTLLNYVDAICFNELIMKRNFLSWKRGLQLNYNV 266
Query: 698 AELELWCCQAKEEYAGSSWDELKHIRQAVGFLVIHQKYRISYDEITNDLCPILSVQQLYR 757
LE WC K + L+H+ Q L + +KY I +I +C L+ QL +
Sbjct: 267 TRLEEWC---KTHGLTDGTECLQHLIQTAKLLQV-RKYTIEDIDILRGICYSLTPAQLQK 322
Query: 758 ICTLY 762
+ + Y
Sbjct: 323 LISQY 327
>pdb|1BR1|A Chain A, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|C Chain C, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|E Chain E, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|G Chain G, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR4|A Chain A, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|C Chain C, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|E Chain E, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|G Chain G, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
Length = 820
Score = 36.2 bits (82), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Query: 19 DEVTACKRLLEKVGLEG--YQIGKTKVFLRAGQMADLDARRTEVLGRSASIIQRKVRSYL 76
D AC +++ + L+ Y+IG++K+F R G +A L+ R + Q + R YL
Sbjct: 747 DGKQACILMIKALELDPNLYRIGQSKIFFRTGVLAHLEEERDLKITDVIIAFQAQCRGYL 806
Query: 77 SRKNY 81
+RK +
Sbjct: 807 ARKAF 811
>pdb|1I84|S Chain S, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment.
pdb|1I84|V Chain V, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment
Length = 1184
Score = 35.8 bits (81), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Query: 19 DEVTACKRLLEKVGLEG--YQIGKTKVFLRAGQMADLDARRTEVLGRSASIIQRKVRSYL 76
D AC +++ + L+ Y+IG++K+F R G +A L+ R + Q + R YL
Sbjct: 747 DGKQACILMIKALELDPNLYRIGQSKIFFRTGVLAHLEEERDLKITDVIIAFQAQCRGYL 806
Query: 77 SRKNY 81
+RK +
Sbjct: 807 ARKAF 811
>pdb|2YCU|A Chain A, Crystal Structure Of Human Non Muscle Myosin 2c In
Pre-power Stroke State
Length = 995
Score = 33.9 bits (76), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 36/59 (61%), Gaps = 8/59 (13%)
Query: 19 DEVTACKRLLEKVGLEG--YQIGKTKVFLRAGQMADLDARR------TEVLGRSASIIQ 69
D AC+++++ + L+ Y++G++K+F RAG +A L+ R ++ L R+ ++Q
Sbjct: 714 DGKQACEKMIQALELDPNLYRVGQSKIFFRAGVLAQLEEERASEQTKSDYLKRANELVQ 772
>pdb|1G8X|A Chain A, Structure Of A Genetically Engineered Molecular Motor
pdb|1G8X|B Chain B, Structure Of A Genetically Engineered Molecular Motor
Length = 1010
Score = 33.9 bits (76), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 5/50 (10%)
Query: 34 EGYQIGKTKVFLRAGQMADLDARRTEVLGRSASIIQRKVRSYLSRKNYIM 83
E Y+ G TK+F RAGQ+A ++ R + LG ++ YL R N ++
Sbjct: 735 EQYRFGITKIFFRAGQLARIEEAREQRLGS-----EQTKSDYLKRANELV 779
>pdb|4DBR|A Chain A, Myosin Vi D179y (md) Pre-powerstroke State
Length = 786
Score = 33.5 bits (75), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
Query: 24 CKRLLEKVGLE--GYQIGKTKVFLRAGQMADLD 54
CK L + +GL Y+ G TKVF R G+ A+ D
Sbjct: 732 CKALFKALGLNEIDYKFGLTKVFFRPGKFAEFD 764
>pdb|4E7S|A Chain A, Myosin Vi D23r I24r R569e (Md) Pre-Powerstroke State
pdb|4E7S|B Chain B, Myosin Vi D23r I24r R569e (Md) Pre-Powerstroke State
Length = 798
Score = 33.5 bits (75), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
Query: 24 CKRLLEKVGLE--GYQIGKTKVFLRAGQMADLD 54
CK L + +GL Y+ G TKVF R G+ A+ D
Sbjct: 744 CKALFKALGLNEIDYKFGLTKVFFRPGKFAEFD 776
>pdb|2V26|A Chain A, Myosin Vi (Md) Pre-Powerstroke State (Mg.Adp.Vo4)
Length = 784
Score = 33.5 bits (75), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
Query: 24 CKRLLEKVGLE--GYQIGKTKVFLRAGQMADLD 54
CK L + +GL Y+ G TKVF R G+ A+ D
Sbjct: 731 CKALFKALGLNEIDYKFGLTKVFFRPGKFAEFD 763
>pdb|4E7Z|A Chain A, Myosin Vi (Md) Pre-Powerstroke State, P21 Crystal Form
pdb|4E7Z|B Chain B, Myosin Vi (Md) Pre-Powerstroke State, P21 Crystal Form
Length = 798
Score = 33.5 bits (75), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
Query: 24 CKRLLEKVGLE--GYQIGKTKVFLRAGQMADLD 54
CK L + +GL Y+ G TKVF R G+ A+ D
Sbjct: 744 CKALFKALGLNEIDYKFGLTKVFFRPGKFAEFD 776
>pdb|4DBP|A Chain A, Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal
Structure
Length = 814
Score = 33.5 bits (75), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
Query: 24 CKRLLEKVGLE--GYQIGKTKVFLRAGQMADLD 54
CK L + +GL Y+ G TKVF R G+ A+ D
Sbjct: 734 CKALFKALGLNEIDYKFGLTKVFFRPGKFAEFD 766
>pdb|2BKH|A Chain A, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure
Length = 814
Score = 33.5 bits (75), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
Query: 24 CKRLLEKVGLE--GYQIGKTKVFLRAGQMADLD 54
CK L + +GL Y+ G TKVF R G+ A+ D
Sbjct: 734 CKALFKALGLNEIDYKFGLTKVFFRPGKFAEFD 766
>pdb|4DBQ|A Chain A, Myosin Vi D179y (md-insert2-cam, Delta-insert1) Post-rigor
State
Length = 788
Score = 33.5 bits (75), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
Query: 24 CKRLLEKVGLE--GYQIGKTKVFLRAGQMADLD 54
CK L + +GL Y+ G TKVF R G+ A+ D
Sbjct: 708 CKALFKALGLNEIDYKFGLTKVFFRPGKFAEFD 740
>pdb|3L9I|A Chain A, Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant Crystal
Structure
Length = 814
Score = 33.5 bits (75), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
Query: 24 CKRLLEKVGLE--GYQIGKTKVFLRAGQMADLD 54
CK L + +GL Y+ G TKVF R G+ A+ D
Sbjct: 734 CKALFKALGLNEIDYKFGLTKVFFRPGKFAEFD 766
>pdb|2VAS|A Chain A, Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigor State
pdb|2VB6|A Chain A, Myosin Vi (Md-Insert2-Cam, Delta Insert1) Post-Rigor State
( Crystal Form 2)
Length = 788
Score = 33.5 bits (75), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
Query: 24 CKRLLEKVGLE--GYQIGKTKVFLRAGQMADLD 54
CK L + +GL Y+ G TKVF R G+ A+ D
Sbjct: 708 CKALFKALGLNEIDYKFGLTKVFFRPGKFAEFD 740
>pdb|2X51|A Chain A, M6 Delta Insert1
Length = 789
Score = 33.5 bits (75), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
Query: 24 CKRLLEKVGLE--GYQIGKTKVFLRAGQMADLD 54
CK L + +GL Y+ G TKVF R G+ A+ D
Sbjct: 709 CKALFKALGLNEIDYKFGLTKVFFRPGKFAEFD 741
>pdb|4ANJ|A Chain A, Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke State
(Mg.Adp.Alf4)
Length = 1052
Score = 33.5 bits (75), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
Query: 24 CKRLLEKVGLE--GYQIGKTKVFLRAGQMADLD 54
CK L + +GL Y+ G TKVF R G+ A+ D
Sbjct: 735 CKALFKALGLNEIDYKFGLTKVFFRPGKFAEFD 767
>pdb|3MMI|A Chain A, Crystal Structure Of The Globular Tail Of Myo4p
pdb|3MMI|B Chain B, Crystal Structure Of The Globular Tail Of Myo4p
Length = 386
Score = 30.8 bits (68), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 20/43 (46%)
Query: 661 KIFTQTFSYINVQLFNSLLLRRECCTFSNGEYVKAGLAELELW 703
KIF T Y+NV LFN L+ + + G V + L W
Sbjct: 214 KIFNDTLKYLNVMLFNDLITKCPALNWKYGYEVDRNIERLVSW 256
>pdb|2XEL|A Chain A, Molecular Mechanism Of Pentachloropseudilin Mediated
Inhibition Of Myosin Motor Activity
pdb|4AE3|A Chain A, Crystal Structure Of Ammosamide 272:myosin-2 Motor Domain
Complex
Length = 776
Score = 30.4 bits (67), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 19/28 (67%)
Query: 34 EGYQIGKTKVFLRAGQMADLDARRTEVL 61
E Y+ G TK+F RAGQ+A ++ R + L
Sbjct: 734 EQYRFGITKIFFRAGQLARIEEAREQRL 761
>pdb|2XO8|A Chain A, Crystal Structure Of Myosin-2 In Complex With
Tribromodichloropseudilin
Length = 776
Score = 30.4 bits (67), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 19/28 (67%)
Query: 34 EGYQIGKTKVFLRAGQMADLDARRTEVL 61
E Y+ G TK+F RAGQ+A ++ R + L
Sbjct: 734 EQYRFGITKIFFRAGQLARIEEAREQRL 761
>pdb|3MNQ|A Chain A, Crystal Structure Of Myosin-2 Motor Domain In Complex With
Adp- Metavanadate And Resveratrol
Length = 788
Score = 30.4 bits (67), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 19/28 (67%)
Query: 34 EGYQIGKTKVFLRAGQMADLDARRTEVL 61
E Y+ G TK+F RAGQ+A ++ R + L
Sbjct: 746 EQYRFGITKIFFRAGQLARIEEAREQRL 773
>pdb|2JHR|A Chain A, Crystal Structure Of Myosin-2 Motor Domain In Complex With
Adp-Metavanadate And Pentabromopseudilin
pdb|2JJ9|A Chain A, Crystal Structure Of Myosin-2 In Complex With Adp-
Metavanadate
pdb|3MJX|A Chain A, Crystal Structure Of Myosin-2 Motor Domain In Complex With
Adp- Metavanadate And Blebbistatin
Length = 788
Score = 30.4 bits (67), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 19/28 (67%)
Query: 34 EGYQIGKTKVFLRAGQMADLDARRTEVL 61
E Y+ G TK+F RAGQ+A ++ R + L
Sbjct: 746 EQYRFGITKIFFRAGQLARIEEAREQRL 773
>pdb|2Y0R|X Chain X, Structural Basis For The Allosteric Interference Of Myosin
Function By Mutants G680a And G680v Of Dictyostelium
Myosin-2
pdb|2Y8I|X Chain X, Structural Basis For The Allosteric Interference Of Myosin
Function By Mutants G680a And G680v Of Dictyostelium
Myosin-2
Length = 758
Score = 30.0 bits (66), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 12/24 (50%), Positives = 17/24 (70%)
Query: 34 EGYQIGKTKVFLRAGQMADLDARR 57
E Y+ G TK+F RAGQ+A ++ R
Sbjct: 734 EQYRFGITKIFFRAGQLARIEEAR 757
>pdb|2Y9E|X Chain X, Structural Basis For The Allosteric Interference Of Myosin
Function By Mutants G680a And G680v Of Dictyostelium
Myosin-2
Length = 758
Score = 30.0 bits (66), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 12/24 (50%), Positives = 17/24 (70%)
Query: 34 EGYQIGKTKVFLRAGQMADLDARR 57
E Y+ G TK+F RAGQ+A ++ R
Sbjct: 734 EQYRFGITKIFFRAGQLARIEEAR 757
>pdb|1FMV|A Chain A, Crystal Structure Of The Apo Motor Domain Of
Dictyostellium Myosin Ii
pdb|1FMW|A Chain A, Crystal Structure Of The Mgatp Complex For The Motor
Domain Of Dictyostelium Myosin Ii
Length = 761
Score = 30.0 bits (66), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 12/24 (50%), Positives = 17/24 (70%)
Query: 34 EGYQIGKTKVFLRAGQMADLDARR 57
E Y+ G TK+F RAGQ+A ++ R
Sbjct: 735 EQYRFGITKIFFRAGQLARIEEAR 758
>pdb|2AKA|A Chain A, Structure Of The Nucleotide-Free Myosin Ii Motor Domain
From Dictyostelium Discoideum Fused To The Gtpase Domain
Of Dynamin 1 From Rattus Norvegicus
Length = 776
Score = 30.0 bits (66), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 18/26 (69%)
Query: 34 EGYQIGKTKVFLRAGQMADLDARRTE 59
E Y+ G TK+F RAGQ+A ++ R +
Sbjct: 746 EQYRFGITKIFFRAGQLARIEEAREQ 771
>pdb|1D0X|A Chain A, Dictyostelium Myosin S1dc (Motor Domain Fragment)
Complexed With M-Nitrophenyl Aminoethyldiphosphate
Beryllium Trifluoride.
pdb|1D0Y|A Chain A, Dictyostelium Myosin S1dc (Motor Domain Fragment)
Complexed With O-Nitrophenyl Aminoethyldiphosphate
Beryllium Fluoride.
pdb|1D0Z|A Chain A, Dictyostelium Myosin S1dc (Motor Domain Fragment)
Complexed With P-Nitrophenyl Aminoethyldiphosphate
Beryllium Trifluoride.
pdb|1D1A|A Chain A, Dictyostelium Myosin S1dc (Motor Domain Fragment)
Complexed With O,P-Dinitrophenyl Aminoethyldiphosphate
Beryllium Trifluoride.
pdb|1D1B|A Chain A, Dictyostelium Myosin S1dc (Motor Domain Fragment)
Complexed With O,P-Dinitrophenyl Aminopropyldiphosphate
Beryllium Trifluoride.
pdb|1D1C|A Chain A, Dictyostelium Myosin S1dc (Motor Domain Fragment)
Complexed With N-Methyl-O-Nitrophenyl
Aminoethyldiphosphate Beryllium Trifluoride
Length = 761
Score = 30.0 bits (66), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 12/24 (50%), Positives = 17/24 (70%)
Query: 34 EGYQIGKTKVFLRAGQMADLDARR 57
E Y+ G TK+F RAGQ+A ++ R
Sbjct: 735 EQYRFGITKIFFRAGQLARIEEAR 758
>pdb|1MMD|A Chain A, Truncated Head Of Myosin From Dictyostelium Discoideum
Complexed With Mgadp-Bef3
pdb|1MND|A Chain A, Truncated Head Of Myosin From Dictyostelium Discoideum
Complexed With Mgadp-Alf4
pdb|1MNE|A Chain A, Truncated Head Of Myosin From Dictyostelium Discoideum
Complexed With Mg-Pyrophosphate
pdb|1VOM|A Chain A, Complex Between Dictyostelium Myosin And Mgadp And
Vanadate At 1.9a Resolution
Length = 762
Score = 30.0 bits (66), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 12/24 (50%), Positives = 17/24 (70%)
Query: 34 EGYQIGKTKVFLRAGQMADLDARR 57
E Y+ G TK+F RAGQ+A ++ R
Sbjct: 735 EQYRFGITKIFFRAGQLARIEEAR 758
>pdb|1YV3|A Chain A, The Structural Basis Of Blebbistatin Inhibition And
Specificity For Myosin Ii
pdb|3BZ7|A Chain A, Crystal Structures Of (S)-(-)-Blebbistatin Analogs Bound
To Dictyostelium Discoideum Myosin Ii
pdb|3BZ8|A Chain A, Crystal Structures Of (S)-(-)-Blebbistatin Analogs Bound
To Dictyostelium Discoideum Myosin Ii
pdb|3BZ9|A Chain A, Crystal Structures Of (S)-(-)-Blebbistatin Analogs Bound
To Dictyostelium Discoideum Myosin Ii
Length = 762
Score = 30.0 bits (66), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 12/24 (50%), Positives = 17/24 (70%)
Query: 34 EGYQIGKTKVFLRAGQMADLDARR 57
E Y+ G TK+F RAGQ+A ++ R
Sbjct: 735 EQYRFGITKIFFRAGQLARIEEAR 758
>pdb|3MYH|X Chain X, Insights Into The Importance Of Hydrogen Bonding In The
Gamma- Phosphate Binding Pocket Of Myosin: Structural
And Functional Studies Of Ser236
pdb|3MYK|X Chain X, Insights Into The Importance Of Hydrogen Bonding In The
Gamma- Phosphate Binding Pocket Of Myosin: Structural
And Functional Studies Of Ser236
pdb|3MYL|X Chain X, Insights Into The Importance Of Hydrogen Bonding In The
Gamma- Phosphate Binding Pocket Of Myosin: Structural
And Functional Studies Of Ser236
Length = 762
Score = 30.0 bits (66), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 12/24 (50%), Positives = 17/24 (70%)
Query: 34 EGYQIGKTKVFLRAGQMADLDARR 57
E Y+ G TK+F RAGQ+A ++ R
Sbjct: 735 EQYRFGITKIFFRAGQLARIEEAR 758
>pdb|1JWY|A Chain A, Crystal Structure Of The Dynamin A Gtpase Domain Complexed
With Gdp, Determined As Myosin Fusion
pdb|1JX2|A Chain A, Crystal Structure Of The Nucleotide-Free Dynamin A Gtpase
Domain, Determined As Myosin Fusion
Length = 776
Score = 30.0 bits (66), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 18/26 (69%)
Query: 34 EGYQIGKTKVFLRAGQMADLDARRTE 59
E Y+ G TK+F RAGQ+A ++ R +
Sbjct: 746 EQYRFGITKIFFRAGQLARIEEAREQ 771
>pdb|1W9L|A Chain A, Myosin Ii Dictyostelium Discoideum Motor Domain S456e
Bound With Mgadp-Alf4
Length = 770
Score = 30.0 bits (66), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 12/24 (50%), Positives = 17/24 (70%)
Query: 34 EGYQIGKTKVFLRAGQMADLDARR 57
E Y+ G TK+F RAGQ+A ++ R
Sbjct: 735 EQYRFGITKIFFRAGQLARIEEAR 758
>pdb|1W9J|A Chain A, Myosin Ii Dictyostelium Discoideum Motor Domain S456y
Bound With Mgadp-Alf4
Length = 770
Score = 30.0 bits (66), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 12/24 (50%), Positives = 17/24 (70%)
Query: 34 EGYQIGKTKVFLRAGQMADLDARR 57
E Y+ G TK+F RAGQ+A ++ R
Sbjct: 735 EQYRFGITKIFFRAGQLARIEEAR 758
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.130 0.367
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,304,374
Number of Sequences: 62578
Number of extensions: 736220
Number of successful extensions: 2715
Number of sequences better than 100.0: 77
Number of HSP's better than 100.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 31
Number of HSP's that attempted gapping in prelim test: 2555
Number of HSP's gapped (non-prelim): 159
length of query: 841
length of database: 14,973,337
effective HSP length: 107
effective length of query: 734
effective length of database: 8,277,491
effective search space: 6075678394
effective search space used: 6075678394
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 56 (26.2 bits)