Query 003184
Match_columns 841
No_of_seqs 297 out of 1749
Neff 5.0
Searched_HMMs 29240
Date Mon Mar 25 16:19:57 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/003184.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/003184hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2y65_A Kinesin, kinesin heavy 100.0 2.5E-61 8.6E-66 530.7 21.5 248 2-254 112-360 (365)
2 3b6u_A Kinesin-like protein KI 100.0 3.3E-60 1.1E-64 522.7 20.7 243 2-247 129-372 (372)
3 3cob_A Kinesin heavy chain-lik 100.0 1.1E-59 3.8E-64 518.2 21.5 246 2-256 104-353 (369)
4 1t5c_A CENP-E protein, centrom 100.0 2.2E-59 7.4E-64 512.8 23.2 237 2-240 102-341 (349)
5 3bfn_A Kinesin-like protein KI 100.0 8.6E-60 2.9E-64 521.5 20.0 236 2-242 123-362 (388)
6 1goj_A Kinesin, kinesin heavy 100.0 2.9E-59 9.8E-64 512.9 22.6 234 2-240 109-343 (355)
7 2vvg_A Kinesin-2; motor protei 100.0 1.2E-58 4E-63 507.1 20.9 233 2-239 114-347 (350)
8 2owm_A Nckin3-434, related to 100.0 2.5E-58 8.5E-63 518.0 23.3 232 2-236 161-422 (443)
9 2zfi_A Kinesin-like protein KI 100.0 2.1E-58 7.3E-63 507.8 19.3 233 2-235 116-362 (366)
10 1x88_A Kinesin-like protein KI 100.0 2.7E-58 9.3E-63 505.8 18.8 230 2-235 124-358 (359)
11 1bg2_A Kinesin; motor protein, 100.0 1.2E-57 4.1E-62 494.8 20.2 220 2-227 105-325 (325)
12 2wbe_C Bipolar kinesin KRP-130 100.0 1.1E-57 3.9E-62 503.1 19.5 233 2-238 136-372 (373)
13 4a14_A Kinesin, kinesin-like p 100.0 6.7E-57 2.3E-61 492.4 22.9 224 2-225 114-344 (344)
14 2nr8_A Kinesin-like protein KI 100.0 3.2E-57 1.1E-61 497.0 19.2 222 2-227 131-358 (358)
15 3lre_A Kinesin-like protein KI 100.0 6.3E-57 2.2E-61 494.4 21.2 223 2-227 130-355 (355)
16 2h58_A Kinesin-like protein KI 100.0 1.6E-56 5.6E-61 486.9 21.4 221 2-228 105-329 (330)
17 3nwn_A Kinesin-like protein KI 100.0 1.4E-56 4.8E-61 492.1 19.2 222 2-227 132-359 (359)
18 3gbj_A KIF13B protein; kinesin 100.0 1.4E-56 4.8E-61 491.4 18.6 225 2-227 117-350 (354)
19 1f9v_A Kinesin-like protein KA 100.0 2.1E-56 7E-61 489.0 19.4 226 2-232 107-346 (347)
20 2rep_A Kinesin-like protein KI 100.0 1.2E-55 4E-60 487.3 22.2 220 2-227 144-376 (376)
21 1ry6_A Internal kinesin; kines 100.0 9.2E-56 3.2E-60 485.8 20.8 225 2-236 114-340 (360)
22 3t0q_A AGR253WP; kinesin, alph 100.0 8.3E-56 2.9E-60 484.6 19.6 225 2-231 108-348 (349)
23 4etp_A Kinesin-like protein KA 100.0 1E-54 3.6E-59 483.9 20.2 226 2-232 163-402 (403)
24 2heh_A KIF2C protein; kinesin, 100.0 9.8E-55 3.3E-59 481.0 18.9 217 2-230 165-385 (387)
25 1v8k_A Kinesin-like protein KI 100.0 2E-54 6.8E-59 481.4 18.4 219 2-232 185-407 (410)
26 3u06_A Protein claret segregat 100.0 6.1E-54 2.1E-58 478.6 20.1 225 2-236 163-392 (412)
27 3dc4_A Kinesin-like protein NO 100.0 1.7E-53 6E-58 465.3 19.4 213 2-232 125-340 (344)
28 4h1g_A Maltose binding protein 100.0 3.9E-53 1.3E-57 500.5 20.9 222 2-228 485-712 (715)
29 2kin_B Kinesin; motor protein, 100.0 4.6E-30 1.6E-34 234.9 7.2 99 152-250 1-99 (100)
30 3kin_B Kinesin heavy chain; mo 99.9 3.3E-28 1.1E-32 228.6 11.0 98 156-253 1-98 (117)
31 2o0a_A S.cerevisiae chromosome 97.3 4.1E-05 1.4E-09 81.6 0.9 186 3-233 105-295 (298)
32 3sjb_C Golgi to ER traffic pro 76.6 11 0.00039 33.9 8.6 66 239-308 21-86 (93)
33 2jee_A YIIU; FTSZ, septum, coi 69.0 33 0.0011 30.2 9.5 59 242-309 21-79 (81)
34 3sja_C Golgi to ER traffic pro 67.5 23 0.00078 30.0 7.9 51 241-295 6-56 (65)
35 3nmd_A CGMP dependent protein 63.8 8.8 0.0003 33.1 4.8 30 275-304 30-59 (72)
36 3hnw_A Uncharacterized protein 60.1 46 0.0016 31.8 9.7 40 270-309 95-134 (138)
37 3nmd_A CGMP dependent protein 58.5 28 0.00096 30.0 7.0 46 243-304 21-66 (72)
38 3vlc_E Golgi to ER traffic pro 56.1 6.7 0.00023 35.5 2.9 58 241-302 30-87 (94)
39 3i00_A HIP-I, huntingtin-inter 55.6 44 0.0015 31.3 8.5 67 239-310 13-79 (120)
40 3hnw_A Uncharacterized protein 51.7 52 0.0018 31.4 8.5 53 242-303 83-135 (138)
41 3he5_A Synzip1; heterodimeric 43.6 70 0.0024 24.7 6.3 44 242-294 4-47 (49)
42 3a7p_A Autophagy protein 16; c 42.6 1.4E+02 0.0046 29.2 9.8 57 241-306 68-124 (152)
43 4ayb_H DNA-directed RNA polyme 40.0 16 0.00056 32.2 2.8 44 751-813 21-64 (84)
44 3mq9_A Bone marrow stromal ant 37.2 33 0.0011 38.0 5.4 63 243-305 399-463 (471)
45 3s4r_A Vimentin; alpha-helix, 36.9 41 0.0014 30.0 4.9 62 239-304 21-82 (93)
46 4emc_A Monopolin complex subun 35.9 1.1E+02 0.0037 30.9 8.2 42 239-296 18-59 (190)
47 1gk4_A Vimentin; intermediate 35.1 1.3E+02 0.0044 26.1 7.8 59 244-307 4-62 (84)
48 3na7_A HP0958; flagellar bioge 32.7 1.3E+02 0.0044 31.0 8.7 24 278-301 104-127 (256)
49 2v66_B Nuclear distribution pr 32.1 76 0.0026 29.4 6.0 33 276-308 33-65 (111)
50 3mq7_A Bone marrow stromal ant 30.8 58 0.002 30.5 4.9 32 279-310 72-103 (121)
51 2yy0_A C-MYC-binding protein; 29.8 85 0.0029 25.3 5.2 28 281-308 22-49 (53)
52 2lw1_A ABC transporter ATP-bin 27.8 2.3E+02 0.0077 24.6 8.1 21 241-261 29-49 (89)
53 1l8d_A DNA double-strand break 27.3 2.7E+02 0.0093 24.6 8.9 38 272-309 65-102 (112)
54 2l5g_B Putative uncharacterize 26.9 1.3E+02 0.0046 23.3 5.5 31 268-298 6-36 (42)
55 1t2k_D Cyclic-AMP-dependent tr 25.7 1.8E+02 0.0062 23.5 6.6 33 275-307 26-58 (61)
56 1ci6_A Transcription factor AT 25.4 1.5E+02 0.0052 24.4 6.2 33 276-308 28-60 (63)
57 3oja_B Anopheles plasmodium-re 25.2 2E+02 0.0069 32.5 9.3 33 281-313 554-586 (597)
58 1lwu_C Fibrinogen gamma chain; 24.9 1.7E+02 0.0057 31.8 8.1 50 243-308 7-56 (323)
59 2wt7_A Proto-oncogene protein 24.6 1.9E+02 0.0066 23.7 6.6 35 274-308 26-60 (63)
60 3efg_A Protein SLYX homolog; x 24.4 2.1E+02 0.0071 24.7 7.1 12 246-257 12-23 (78)
61 2dfs_A Myosin-5A; myosin-V, in 24.2 1.4E+02 0.0049 37.2 8.4 12 6-17 409-420 (1080)
62 1nkp_B MAX protein, MYC proto- 24.1 3.3E+02 0.011 23.1 10.2 45 267-311 36-80 (83)
63 1x8y_A Lamin A/C; structural p 23.9 90 0.0031 27.3 4.8 34 273-306 30-63 (86)
64 1hjb_A Ccaat/enhancer binding 23.1 1.5E+02 0.0051 26.3 6.0 37 275-311 40-76 (87)
65 3oja_B Anopheles plasmodium-re 23.0 2.7E+02 0.0093 31.4 9.9 17 242-258 478-494 (597)
66 1jr5_A 10 kDa anti-sigma facto 22.8 58 0.002 29.1 3.2 33 746-778 54-86 (90)
67 3b2e_E Golgi to ER traffic pro 27.4 19 0.00066 31.9 0.0 57 242-302 21-77 (84)
68 3iv1_A Tumor susceptibility ge 21.8 1.5E+02 0.0051 25.9 5.5 32 275-306 43-74 (78)
69 1x79_B RAB GTPase binding effe 21.5 3.2E+02 0.011 25.3 8.1 19 241-259 6-24 (112)
70 3mov_A Lamin-B1; LMNB1, B-type 21.1 83 0.0028 28.2 4.0 35 272-306 38-72 (95)
71 3m9b_A Proteasome-associated A 20.6 62 0.0021 34.0 3.5 71 241-312 24-95 (251)
72 1eik_A RNA polymerase subunit 20.5 67 0.0023 28.0 3.1 43 752-813 16-58 (77)
73 3tnu_B Keratin, type II cytosk 20.0 2.9E+02 0.01 25.5 7.8 67 240-306 35-110 (129)
No 1
>2y65_A Kinesin, kinesin heavy chain; motor protein; HET: ADP; 2.20A {Drosophila melanogaster} PDB: 2y5w_A*
Probab=100.00 E-value=2.5e-61 Score=530.73 Aligned_cols=248 Identities=38% Similarity=0.496 Sum_probs=211.3
Q ss_pred CCcHHHHHHHHHHHHHhcC-CCeEEEEEEEEEEEcCceeecCCCCCCCceeeeCCCCCeEecccEEEEecCHHHHHHHHH
Q 003184 2 TGITECTVADIFDYIHRHE-ERAFVLKFSAMEIYNEAIRDLLSTDNTPLRLLDDPEKGVVVEKVTEEILKDWNHLKELLS 80 (841)
Q Consensus 2 ~GIIprav~dLF~~Ie~~~-e~efsV~vSylEIYNE~V~DLLs~~~~~L~I~ed~~~gv~V~gLtev~V~S~eel~~LL~ 80 (841)
+|||||++++||+.|.... +..|.|+|||+|||||+|+|||++...++.+++|+.++++|.|++++.|.|++|++.+|.
T Consensus 112 ~Giipr~~~~lF~~i~~~~~~~~~~v~vS~~EIYnE~i~DLL~~~~~~l~i~e~~~~~~~v~gl~~~~V~s~~e~~~ll~ 191 (365)
T 2y65_A 112 QGIIPRIVNDIFNHIYAMEVNLEFHIKVSYYEIYMDKIRDLLDVSKVNLSVHEDKNRVPYVKGATERFVSSPEDVFEVIE 191 (365)
T ss_dssp BCHHHHHHHHHHHHHHHCCSCEEEEEEEEEEEEETTEEEETTCTTCCSBCEEECSSSCEEETTCCCEEECSHHHHHHHHH
T ss_pred CChHHHHHHHHHHHHHhccCCceEEEEEEEEEEECCeeeecccCCcCCceEEECCCCCEEecCCEEEecCCHHHHHHHHH
Confidence 6999999999999998754 679999999999999999999999888999999999999999999999999999999999
Q ss_pred HHHhhcccccccccCCCCCceeEEEEEEeeccccccCCCCcceeEeeeeEeecCCCcccccccchhhhhhhhcccccchH
Q 003184 81 ICEAQRRIGETLLNEKSSRSHQIIRLMIESSAREFLGKENSTTLSASVNFVDLAGSERASQALSTGARLKEGCHINRSLL 160 (841)
Q Consensus 81 ~G~~~R~~~sT~lN~~SSRSH~IftL~Ve~~~~e~~~~~~~~~~~SrL~fVDLAGSER~~kt~s~g~rlkEg~~INkSLl 160 (841)
.|.++|++++|.+|..|||||+||+|+|.+... .......++|+|||||||||..++++.|.+++|+.+||+||+
T Consensus 192 ~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~-----~~~~~~~skL~lVDLAGSEr~~~t~~~g~rl~E~~~INkSL~ 266 (365)
T 2y65_A 192 EGKSNRHIAVTNMNEHSSRSHSVFLINVKQENL-----ENQKKLSGKLYLVDLAGSEKVSKTGAEGTVLDEAKNINKSLS 266 (365)
T ss_dssp HHHHHHTTTCSCHHHHHHTSEEEEEEEEEEEET-----TTCCEEEEEEEEEECCCCCC----------------CCHHHH
T ss_pred HHHhhcccccccCCCCCCCceEEEEEEEEEEec-----CCCCEeEEEEEEEECCCCCcchhcCCcchhHHHHHHHHHHHH
Confidence 999999999999999999999999999987532 233457899999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcCCCCcccCCChhhhhccccccCCCccceEEeecCCCCCCHHHHHHHHHHHHHhcccccceeeccccCHH
Q 003184 161 TLSTVIRKLSKGRNGHINYRDSKLTRMLQPCLGGNARTAIICTLSPARSHVEQTRNTLLFACCAKEVTTKAQVNVVMSDK 240 (841)
Q Consensus 161 aLg~VI~aLs~gk~~hIPYRDSKLTrLLqdSLGGNsrT~mIa~ISPa~~~~eETLsTLrFAsrAK~I~n~p~vN~~~s~~ 240 (841)
+||+||.+|++++..||||||||||+||||+|||||+|+|||||||+..+++||++||+||.|||+|+|+|++|...+..
T Consensus 267 aLg~vI~aL~~~~~~hvPyRdSkLT~lLqdsLgGnskt~mI~~isP~~~~~~ETl~TL~fA~rak~I~n~~~~n~~~~~~ 346 (365)
T 2y65_A 267 ALGNVISALADGNKTHIPYRDSKLTRILQESLGGNARTTIVICCSPASFNESETKSTLDFGRRAKTVKNVVCVNEELTAE 346 (365)
T ss_dssp HHHHHHHHHHHCCCSCCCGGGCHHHHHTGGGTTSSSEEEEEEEECCBGGGHHHHHHHHHHHHHHTTCEEECCCEEECCSH
T ss_pred HHHHHHHHHhcCCCCCCccccCHHHHHHHhhcCCCccEEEEEEecCccCCHHHHHHHHHHHHHHhcccCcceeCCCCCHH
Confidence 99999999998877799999999999999999999999999999999999999999999999999999999999999988
Q ss_pred HHHHHHHHHHHHHH
Q 003184 241 ALVKHLQKELARLE 254 (841)
Q Consensus 241 alik~Lq~EiarLe 254 (841)
.+++.|++|+.+++
T Consensus 347 ~~~~~~~~e~~~~~ 360 (365)
T 2y65_A 347 EWKRRYEKEKEKNA 360 (365)
T ss_dssp HHHHC---------
T ss_pred HHHHHHHHHHHHHH
Confidence 89888888887665
No 2
>3b6u_A Kinesin-like protein KIF3B; structural genomics consortium, motor domain, ADP, SGC, ATP-binding, coiled coil, microtubule, motor protein; HET: ADP; 1.80A {Homo sapiens} PDB: 3b6v_A*
Probab=100.00 E-value=3.3e-60 Score=522.71 Aligned_cols=243 Identities=40% Similarity=0.604 Sum_probs=205.8
Q ss_pred CCcHHHHHHHHHHHHHhcCCCeEEEEEEEEEEEcCceeecCCCCC-CCceeeeCCCCCeEecccEEEEecCHHHHHHHHH
Q 003184 2 TGITECTVADIFDYIHRHEERAFVLKFSAMEIYNEAIRDLLSTDN-TPLRLLDDPEKGVVVEKVTEEILKDWNHLKELLS 80 (841)
Q Consensus 2 ~GIIprav~dLF~~Ie~~~e~efsV~vSylEIYNE~V~DLLs~~~-~~L~I~ed~~~gv~V~gLtev~V~S~eel~~LL~ 80 (841)
+|||||++++||+.|...++..|.|+|||+|||||+|+|||++.. ..+.+++++.++++|.||+++.|.+++|++.+|.
T Consensus 129 ~Giipr~~~~lF~~i~~~~~~~~~v~vS~~EIYnE~i~DLL~~~~~~~l~i~e~~~~~v~v~gl~~~~v~s~~e~~~ll~ 208 (372)
T 3b6u_A 129 RGVIPNSFDHIFTHISRSQNQQYLVRASYLEIYQEEIRDLLSKDQTKRLELKERPDTGVYVKDLSSFVTKSVKEIEHVMN 208 (372)
T ss_dssp BCHHHHHHHHHHHHHHTCSSCEEEEEEEEEEEETTEEEETTSSCTTCCBCEEEETTTEEEETTCCCEECCSHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHhhhccCCceEEEEEEEEEeCCEEEECCCCCCCCCceEEECCCCcEecCCCEEEEecCHHHHHHHHH
Confidence 699999999999999988889999999999999999999998764 5799999999999999999999999999999999
Q ss_pred HHHhhcccccccccCCCCCceeEEEEEEeeccccccCCCCcceeEeeeeEeecCCCcccccccchhhhhhhhcccccchH
Q 003184 81 ICEAQRRIGETLLNEKSSRSHQIIRLMIESSAREFLGKENSTTLSASVNFVDLAGSERASQALSTGARLKEGCHINRSLL 160 (841)
Q Consensus 81 ~G~~~R~~~sT~lN~~SSRSH~IftL~Ve~~~~e~~~~~~~~~~~SrL~fVDLAGSER~~kt~s~g~rlkEg~~INkSLl 160 (841)
.|.++|++++|.+|..|||||+||+|+|++..... ........|+|+|||||||||..++++.|.+++|+.+||+||+
T Consensus 209 ~g~~~R~~~~T~~N~~SSRSH~If~i~v~~~~~~~--~~~~~~~~skL~lVDLAGSEr~~~t~~~g~rl~E~~~INkSL~ 286 (372)
T 3b6u_A 209 VGNQNRSVGATNMNEHSSRSHAIFVITIECSEVGL--DGENHIRVGKLNLVDLAGSERQAKTGAQGERLKEATKINLSLS 286 (372)
T ss_dssp HHHHHHTTTCSSHHHHHHTSEEEEEEEEEEEC-------CCCEEEEEEEEEECCCCCE----------EEEGGGCCHHHH
T ss_pred HHHHhcCcccccCCCCCCcceEEEEEEEEEeecCC--CCCcceEEEEEEEEECCCCccccccCcchhhhhhHhhhhhhHH
Confidence 99999999999999999999999999998754321 2233467899999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcCCCCcccCCChhhhhccccccCCCccceEEeecCCCCCCHHHHHHHHHHHHHhcccccceeeccccCHH
Q 003184 161 TLSTVIRKLSKGRNGHINYRDSKLTRMLQPCLGGNARTAIICTLSPARSHVEQTRNTLLFACCAKEVTTKAQVNVVMSDK 240 (841)
Q Consensus 161 aLg~VI~aLs~gk~~hIPYRDSKLTrLLqdSLGGNsrT~mIa~ISPa~~~~eETLsTLrFAsrAK~I~n~p~vN~~~s~~ 240 (841)
+||+||.+|++++..|||||||||||||||+|||||+|+|||||||+..+++||++||+||+|||+|+|+|++|....+
T Consensus 287 aLg~vI~aL~~~~~~hvPyRdSkLT~lLqdsLgGnskt~mIa~vsP~~~~~~ETlsTLrfA~rak~I~n~~~~n~~~~~- 365 (372)
T 3b6u_A 287 ALGNVISALVDGKSTHIPYRDSKLTRLLQDSLGGNAKTVMVANVGPASYNVEETLTTLRYANRAKNIKNKPRVNEDPKD- 365 (372)
T ss_dssp HHHHHHHHHHCC---CCCGGGSHHHHHTTTTTTSSSEEEEEEEECCBGGGHHHHHHHHHHHHHHTTCBCCCCCCC-----
T ss_pred HHHHHHHHHhcCCCCCCcccccHHHHHHHHhcCCCccEEEEEEeCCcccCHHHHHHHHHHHHHHhhccccceecCChHH-
Confidence 9999999999887779999999999999999999999999999999999999999999999999999999999987543
Q ss_pred HHHHHHH
Q 003184 241 ALVKHLQ 247 (841)
Q Consensus 241 alik~Lq 247 (841)
+++++||
T Consensus 366 ~~~~~~~ 372 (372)
T 3b6u_A 366 ALLREFQ 372 (372)
T ss_dssp -------
T ss_pred HHHHhcC
Confidence 5666654
No 3
>3cob_A Kinesin heavy chain-like protein; motor, switch II, loop L11, conformation, nucleotide, ATP-binding, microtubule, motor protein; HET: ADP; 2.20A {Solanum tuberosum} SCOP: c.37.1.9 PDB: 3cnz_A* 1sdm_A* 3h4s_A*
Probab=100.00 E-value=1.1e-59 Score=518.21 Aligned_cols=246 Identities=35% Similarity=0.531 Sum_probs=222.3
Q ss_pred CCcHHHHHHHHHHHHHhcCC-CeEEEEEEEEEEEcCceeecCCCCC---CCceeeeCCCCCeEecccEEEEecCHHHHHH
Q 003184 2 TGITECTVADIFDYIHRHEE-RAFVLKFSAMEIYNEAIRDLLSTDN---TPLRLLDDPEKGVVVEKVTEEILKDWNHLKE 77 (841)
Q Consensus 2 ~GIIprav~dLF~~Ie~~~e-~efsV~vSylEIYNE~V~DLLs~~~---~~L~I~ed~~~gv~V~gLtev~V~S~eel~~ 77 (841)
+|||||++++||+.|+...+ ..|.|++||+|||||+|+|||++.. ..+.+++|+.++++|.||+++.|.++++++.
T Consensus 104 ~Giipr~~~~lF~~i~~~~~~~~~~v~vS~~EIYnE~i~DLL~~~~~~~~~l~i~e~~~~~~~v~gl~~~~v~s~~e~~~ 183 (369)
T 3cob_A 104 PGLTPRAMSELFRIMKKDSNKFSFSLKAYMVELYQDTLVDLLLPKQAKRLKLDIKKDSKGMVSVENVTVVSISTYEELKT 183 (369)
T ss_dssp BCHHHHHHHHHHHHHHHTTTTEEEEEEEEEEEECSSCEEESSCCSSSCCCCCEEEECTTSCEEEETCCCEEECSHHHHHH
T ss_pred CchhHHHHHHHHHHHHhhccCceeEEEEEEEEEeCceeeecCCCcccCCcceEEEECCCCCEEccCCEEEEeCCHHHHHH
Confidence 79999999999999998664 6999999999999999999998753 4799999999999999999999999999999
Q ss_pred HHHHHHhhcccccccccCCCCCceeEEEEEEeeccccccCCCCcceeEeeeeEeecCCCcccccccchhhhhhhhccccc
Q 003184 78 LLSICEAQRRIGETLLNEKSSRSHQIIRLMIESSAREFLGKENSTTLSASVNFVDLAGSERASQALSTGARLKEGCHINR 157 (841)
Q Consensus 78 LL~~G~~~R~~~sT~lN~~SSRSH~IftL~Ve~~~~e~~~~~~~~~~~SrL~fVDLAGSER~~kt~s~g~rlkEg~~INk 157 (841)
+|..|.++|++++|.+|..|||||+||+|+|++... .......|+|+|||||||||..++++.|.+++|+.+||+
T Consensus 184 ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~-----~~~~~~~skL~lVDLAGSEr~~~t~~~g~rl~E~~~INk 258 (369)
T 3cob_A 184 IIQRGSEQRHTTGTLMNEQSSRSHLIVSVIIESTNL-----QTQAIARGKLSFVDLAGSERVKKSGSAGNQLKEAQSINK 258 (369)
T ss_dssp HHHHHHHHTCCCSCCTTCHHHHSEEEEEEEEEEEET-----TTCCEEEEEEEEEECCCSSCCCCCSSCSHHHHHHHHHTH
T ss_pred HHHHHhhcceeecccCCCCCCcceEEEEEEEEEecC-----CCCcEEEEEEEEEeCCCCCcccccCccchhhHHHHHHHH
Confidence 999999999999999999999999999999987532 234467899999999999999999999999999999999
Q ss_pred chHHHHHHHHHhhcCCCCcccCCChhhhhccccccCCCccceEEeecCCCCCCHHHHHHHHHHHHHhcccccceeecccc
Q 003184 158 SLLTLSTVIRKLSKGRNGHINYRDSKLTRMLQPCLGGNARTAIICTLSPARSHVEQTRNTLLFACCAKEVTTKAQVNVVM 237 (841)
Q Consensus 158 SLlaLg~VI~aLs~gk~~hIPYRDSKLTrLLqdSLGGNsrT~mIa~ISPa~~~~eETLsTLrFAsrAK~I~n~p~vN~~~ 237 (841)
||++||+||.+|+.++ .||||||||||+||||+|||||+|+|||||||+..+++||++||+||+|||+|+|.|.+|...
T Consensus 259 SL~aLg~vI~aL~~~~-~hvPyRdSkLT~lLqdsLgGnskt~mIa~isP~~~~~~ETl~TLrfA~rak~i~~~~~~n~~~ 337 (369)
T 3cob_A 259 SLSALGDVISALSSGN-QHIPYRNHKLTMLMSDSLGGNAKTLMFVNISPAESNLDETHNSLTYASRVRSIVNDPSKNVSS 337 (369)
T ss_dssp HHHHHHHHHHHHHTTC-SCCCGGGCHHHHHTTTTTTSSSEEEEEEEECCBGGGHHHHHHHHHHHHHHHTCBCCCCCCEEC
T ss_pred HHHHHHHHHHHHhcCC-CcCCCcCCHHHHHHHHhcCCCccEEEEEEeCCccccHHHHHHHHHHHHHHhhcccCCcccCCH
Confidence 9999999999999864 599999999999999999999999999999999999999999999999999999999999886
Q ss_pred CHHHHHHHHHHHHHHHHHH
Q 003184 238 SDKALVKHLQKELARLESE 256 (841)
Q Consensus 238 s~~alik~Lq~EiarLe~e 256 (841)
..+..|+++++.|+.+
T Consensus 338 ---~ei~~L~~~l~~~~~~ 353 (369)
T 3cob_A 338 ---KEVARLKKLVSYWKEQ 353 (369)
T ss_dssp ---HHHHHHHHHTTCC---
T ss_pred ---HHHHHHHHHHHHHHHh
Confidence 2334444444444333
No 4
>1t5c_A CENP-E protein, centromeric protein E; kinesin motor-domain-ADP complex, stranded beta-sheet core with solvent exposed alpha-helices; HET: ADP PIN; 2.50A {Homo sapiens}
Probab=100.00 E-value=2.2e-59 Score=512.80 Aligned_cols=237 Identities=45% Similarity=0.684 Sum_probs=209.0
Q ss_pred CCcHHHHHHHHHHHHHhcCCCeEEEEEEEEEEEcCceeecCCCCC--CCceeeeCCCCCeEecccEEEEecCHHHHHHHH
Q 003184 2 TGITECTVADIFDYIHRHEERAFVLKFSAMEIYNEAIRDLLSTDN--TPLRLLDDPEKGVVVEKVTEEILKDWNHLKELL 79 (841)
Q Consensus 2 ~GIIprav~dLF~~Ie~~~e~efsV~vSylEIYNE~V~DLLs~~~--~~L~I~ed~~~gv~V~gLtev~V~S~eel~~LL 79 (841)
+|||||++++||+.|++.++..|.|+|||+|||||+|+|||++.. .+|.|++|+.++++|.||+++.|.+++|++.+|
T Consensus 102 ~Giipr~~~~lF~~i~~~~~~~~~v~vS~~EIYnE~i~DLL~~~~~~~~l~i~ed~~~~~~v~gl~~~~v~s~~e~~~ll 181 (349)
T 1t5c_A 102 LGVIPRAIHDIFQKIKKFPDREFLLRVSYMEIYNETITDLLCGTQKMKPLIIREDVNRNVYVADLTEEVVYTSEMALKWI 181 (349)
T ss_dssp BCHHHHHHHHHHHHGGGCTTEEEEEEEEEEEEETTEEEESSSSSCTTCCEEEEETTTTEEEETTCCCEECSSHHHHHHHH
T ss_pred CchHHHHHHHHHHHHHhCcCCcEEEEEEEEEEeCCEEEEccCCCCCCCCceEEECCCCCEEecCCEEEEeCCHHHHHHHH
Confidence 699999999999999998899999999999999999999998754 589999999999999999999999999999999
Q ss_pred HHHHhhcccccccccCCCCCceeEEEEEEeeccccccCCCCcceeEeeeeEeecCCCcccccccchhhhhhhhcccccch
Q 003184 80 SICEAQRRIGETLLNEKSSRSHQIIRLMIESSAREFLGKENSTTLSASVNFVDLAGSERASQALSTGARLKEGCHINRSL 159 (841)
Q Consensus 80 ~~G~~~R~~~sT~lN~~SSRSH~IftL~Ve~~~~e~~~~~~~~~~~SrL~fVDLAGSER~~kt~s~g~rlkEg~~INkSL 159 (841)
..|.++|++++|.+|..|||||+||+|+|++...............|+|+|||||||||..++++.|.+++|+.+||+||
T Consensus 182 ~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~~~~~~~~~~~~skL~lVDLAGSEr~~~t~~~g~rl~E~~~INkSL 261 (349)
T 1t5c_A 182 TKGEKSRHYGETKMNQRSSRSHTIFRMILESREKGEPSNCEGSVKVSHLNLVDLAGSERAAQTGAAGVRLKEGCNINRSL 261 (349)
T ss_dssp HHHHHTTSSSSSSSSCTTTTCEEEEEEEEEEEECC-------CEEEEEEEEEECCCGGGTC-------CCCSSSCCCHHH
T ss_pred HHhhcccccccccCCCCCCCceEEEEEEEEEeccCCCcCcCccEEEEEEEEEECCCCccccccCCccccchhhhHHhHHH
Confidence 99999999999999999999999999999886443211222346789999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcCC-CCcccCCChhhhhccccccCCCccceEEeecCCCCCCHHHHHHHHHHHHHhcccccceeeccccC
Q 003184 160 LTLSTVIRKLSKGR-NGHINYRDSKLTRMLQPCLGGNARTAIICTLSPARSHVEQTRNTLLFACCAKEVTTKAQVNVVMS 238 (841)
Q Consensus 160 laLg~VI~aLs~gk-~~hIPYRDSKLTrLLqdSLGGNsrT~mIa~ISPa~~~~eETLsTLrFAsrAK~I~n~p~vN~~~s 238 (841)
++||+||.+|+.++ ..|||||||||||||||+|||||+|+|||||||+ +++||++||+||+|||+|+|+|++|....
T Consensus 262 ~aLg~vI~aL~~~~~~~hvPyRdSkLT~lLqdsLgGnskt~mI~~isP~--~~~ETlsTL~fA~rak~I~n~~~vn~~~~ 339 (349)
T 1t5c_A 262 FILGQVIKKLSDGQVGGFINYRDSKLTRILQNSLGGNAKTRIICTITPV--SFDETLTALQFASTAKYMKNTPYVNEVST 339 (349)
T ss_dssp HHHHHHHHHHHHTCCTTSSCGGGSHHHHHTGGGTTSSSEEEEEEEECTT--CSHHHHHHHHHHHHHTTCCCCCCCCEEC-
T ss_pred HHHHHHHHHHhccCCCCCCcccccHHHHHHHHhcCCCceEEEEEEeCCC--CHHHHHHHHHHHHHHhhcccCceeccCCC
Confidence 99999999999875 4699999999999999999999999999999997 58999999999999999999999998865
Q ss_pred HH
Q 003184 239 DK 240 (841)
Q Consensus 239 ~~ 240 (841)
..
T Consensus 340 ~~ 341 (349)
T 1t5c_A 340 DE 341 (349)
T ss_dssp --
T ss_pred CC
Confidence 43
No 5
>3bfn_A Kinesin-like protein KIF22; limited proteolysis, structural genomics consortium domain, ADP, SGC, ATP-binding, DNA-binding, microtubule, MO protein; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=8.6e-60 Score=521.50 Aligned_cols=236 Identities=30% Similarity=0.474 Sum_probs=184.1
Q ss_pred CCcHHHHHHHHHHHHHhc----CCCeEEEEEEEEEEEcCceeecCCCCCCCceeeeCCCCCeEecccEEEEecCHHHHHH
Q 003184 2 TGITECTVADIFDYIHRH----EERAFVLKFSAMEIYNEAIRDLLSTDNTPLRLLDDPEKGVVVEKVTEEILKDWNHLKE 77 (841)
Q Consensus 2 ~GIIprav~dLF~~Ie~~----~e~efsV~vSylEIYNE~V~DLLs~~~~~L~I~ed~~~gv~V~gLtev~V~S~eel~~ 77 (841)
+|||||++++||+.|... .+..|.|+|||+|||||+|+|||++...++.|++|+.++++|.||+++.|.+++|++.
T Consensus 123 ~Giipra~~~lF~~i~~~~~~~~~~~~~V~vS~lEIYnE~i~DLL~~~~~~l~ired~~~~v~v~gl~~~~V~s~~e~~~ 202 (388)
T 3bfn_A 123 PGVIPRALMDLLQLTREEGAEGRPWALSVTMSYLEIYQEKVLDLLDPASGDLVIREDCRGNILIPGLSQKPISSFADFER 202 (388)
T ss_dssp BCHHHHHHHHHHHHHHHHTSTTCSEEEEEEEEEEEEETTEEEESSSCSSCBCCCEECTTSCEECTTCCCEECCSHHHHHH
T ss_pred cchhHHHHHHHHHHHHHhhccCCCceEEEEEEEEEEECCeeeehhccCCCCceEEEcCCCCEEeccceEEEeCCHHHHHH
Confidence 799999999999999863 3468999999999999999999999888999999999999999999999999999999
Q ss_pred HHHHHHhhcccccccccCCCCCceeEEEEEEeeccccccCCCCcceeEeeeeEeecCCCcccccccchhhhhhhhccccc
Q 003184 78 LLSICEAQRRIGETLLNEKSSRSHQIIRLMIESSAREFLGKENSTTLSASVNFVDLAGSERASQALSTGARLKEGCHINR 157 (841)
Q Consensus 78 LL~~G~~~R~~~sT~lN~~SSRSH~IftL~Ve~~~~e~~~~~~~~~~~SrL~fVDLAGSER~~kt~s~g~rlkEg~~INk 157 (841)
+|..|.++|++++|.+|..|||||+||+|+|++.... .......++|+|||||||||..++++.|.+++|+.+||+
T Consensus 203 ll~~g~~~R~~~~T~~N~~SSRSH~If~i~v~~~~~~----~~~~~~~skL~lVDLAGSEr~~~t~~~g~rlkE~~~INk 278 (388)
T 3bfn_A 203 HFLPASRNRTVGATRLNQRSSRSHAVLLVKVDQRERL----APFRQREGKLYLIDLAGSEDNRRTGNKGLRLKESGAINT 278 (388)
T ss_dssp HHHHHTC-----------CGGGSEEEEEEEEEEEESS----TTCCEEEEEEEEEECCCTTC--------------CCCCH
T ss_pred HHHHHhhccccccccCCCCCCCCeEEEEEEEEEeccC----CCCceeEEEEEEEECCCCcccccccCccchhHHHhHhhh
Confidence 9999999999999999999999999999999875321 222357899999999999999999999999999999999
Q ss_pred chHHHHHHHHHhhcCCCCcccCCChhhhhccccccCCCccceEEeecCCCCCCHHHHHHHHHHHHHhcccccceeecccc
Q 003184 158 SLLTLSTVIRKLSKGRNGHINYRDSKLTRMLQPCLGGNARTAIICTLSPARSHVEQTRNTLLFACCAKEVTTKAQVNVVM 237 (841)
Q Consensus 158 SLlaLg~VI~aLs~gk~~hIPYRDSKLTrLLqdSLGGNsrT~mIa~ISPa~~~~eETLsTLrFAsrAK~I~n~p~vN~~~ 237 (841)
||++||+||.+|++++ .|||||||||||||||+|||||+|+|||||||+..+++||++||+||+|||+|+|+|.+|...
T Consensus 279 SL~aLg~vI~aL~~~~-~hVPYRdSkLTrlLqdsLgGnskT~mIa~iSP~~~~~~ETlsTLrfA~rak~I~n~p~~n~~~ 357 (388)
T 3bfn_A 279 SLFVLGKVVDALNQGL-PRVPYRDSKLTRLLQDSLGGSAHSILIANIAPERRFYLDTVSALNFAARSKEVINRPFTNESL 357 (388)
T ss_dssp HHHHHHHHHHHHHTTC-SCCCGGGSHHHHHTTTSSSTTCEEEEEEEECCSGGGHHHHHHHHHHHCSEEEEC---------
T ss_pred hHHHHHHHHHHHhcCC-CCCcCcccHHHHHHHHhhCCCccEEEEEEECCccccHHHHHHHHHHHHHHhhCcCcCcccCCC
Confidence 9999999999999865 499999999999999999999999999999999999999999999999999999999999988
Q ss_pred CHHHH
Q 003184 238 SDKAL 242 (841)
Q Consensus 238 s~~al 242 (841)
+..++
T Consensus 358 ~~~~l 362 (388)
T 3bfn_A 358 QPHAL 362 (388)
T ss_dssp -----
T ss_pred CHHHH
Confidence 77654
No 6
>1goj_A Kinesin, kinesin heavy chain; motor protein, ATPase; HET: ADP; 2.3A {Neurospora crassa} SCOP: c.37.1.9
Probab=100.00 E-value=2.9e-59 Score=512.85 Aligned_cols=234 Identities=36% Similarity=0.527 Sum_probs=221.4
Q ss_pred CCcHHHHHHHHHHHHHhcC-CCeEEEEEEEEEEEcCceeecCCCCCCCceeeeCCCCCeEecccEEEEecCHHHHHHHHH
Q 003184 2 TGITECTVADIFDYIHRHE-ERAFVLKFSAMEIYNEAIRDLLSTDNTPLRLLDDPEKGVVVEKVTEEILKDWNHLKELLS 80 (841)
Q Consensus 2 ~GIIprav~dLF~~Ie~~~-e~efsV~vSylEIYNE~V~DLLs~~~~~L~I~ed~~~gv~V~gLtev~V~S~eel~~LL~ 80 (841)
+|||||++++||+.|.... +.+|.|+|||+|||||+|+|||++....+.+++++.+|++|.||+++.|.+++|++.+|.
T Consensus 109 ~Giipr~~~~lF~~i~~~~~~~~~~v~vS~~EIYnE~i~DLL~~~~~~l~i~e~~~~g~~v~gl~~~~v~s~~e~~~ll~ 188 (355)
T 1goj_A 109 RGVIPRIVEQIFTSILSSAANIEYTVRVSYMEIYMERIRDLLAPQNDNLPVHEEKNRGVYVKGLLEIYVSSVQEVYEVMR 188 (355)
T ss_dssp BCHHHHHHHHHHHHHHTSCTTEEEEEEEEEEEEETTEEEETTSTTCCSCCEEEETTTEEEETTCCCEECCSHHHHHHHHH
T ss_pred CCchHHHHHHHHHHHHhcccCceEEEEEEEEEEECCEEEEcccCccCCceeEEcCCCCEeecCCEEEeCCCHHHHHHHHH
Confidence 6999999999999998754 569999999999999999999999888999999999999999999999999999999999
Q ss_pred HHHhhcccccccccCCCCCceeEEEEEEeeccccccCCCCcceeEeeeeEeecCCCcccccccchhhhhhhhcccccchH
Q 003184 81 ICEAQRRIGETLLNEKSSRSHQIIRLMIESSAREFLGKENSTTLSASVNFVDLAGSERASQALSTGARLKEGCHINRSLL 160 (841)
Q Consensus 81 ~G~~~R~~~sT~lN~~SSRSH~IftL~Ve~~~~e~~~~~~~~~~~SrL~fVDLAGSER~~kt~s~g~rlkEg~~INkSLl 160 (841)
.|.++|++++|.+|..|||||+||+|+|++... .......++|+|||||||||.+++++.|.+++|+.+||+||+
T Consensus 189 ~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~-----~~~~~~~skL~lVDLAGSEr~~~t~~~g~rl~E~~~IN~SL~ 263 (355)
T 1goj_A 189 RGGNARAVAATNMNQESSRSHSIFVITITQKNV-----ETGSAKSGQLFLVDLAGSEKVGKTGASGQTLEEAKKINKSLS 263 (355)
T ss_dssp HHHHHHHHHHHHTTCCGGGCEEEEEEEEEEEET-----TTTEEEEEEEEEEECCCCSCCTTSSSCCCCTTTTGGGTSHHH
T ss_pred HHHhhcCcccccCCCCCCCceEEEEEEEEEecc-----CCCceeeeEEEEEECCCCCcccccccchhhHHHHHhhhhHHH
Confidence 999999999999999999999999999987532 234467899999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcCCCCcccCCChhhhhccccccCCCccceEEeecCCCCCCHHHHHHHHHHHHHhcccccceeeccccCHH
Q 003184 161 TLSTVIRKLSKGRNGHINYRDSKLTRMLQPCLGGNARTAIICTLSPARSHVEQTRNTLLFACCAKEVTTKAQVNVVMSDK 240 (841)
Q Consensus 161 aLg~VI~aLs~gk~~hIPYRDSKLTrLLqdSLGGNsrT~mIa~ISPa~~~~eETLsTLrFAsrAK~I~n~p~vN~~~s~~ 240 (841)
+||+||.+|++++..|||||||||||||||+|||||+|+|||||||+..+++||++||+||+|||+|+|+|++|...+..
T Consensus 264 aLg~vI~aL~~~~~~hvPyRdSkLT~lLqdsLgGns~t~mI~~isP~~~~~~ETl~TL~fA~rak~I~n~~~vn~~~~~~ 343 (355)
T 1goj_A 264 ALGMVINALTDGKSSHVPYRDSKLTRILQESLGGNSRTTLIINCSPSSYNDAETLSTLRFGMRAKSIKNKAKVNAELSPA 343 (355)
T ss_dssp HHHHHHHHHHHCSCSCCCGGGCHHHHHTGGGTTSSCEEEEEEEECCBGGGHHHHHHHHHHHHHHHTCBCCCCCCSSSSCS
T ss_pred HHHHHHHHHhcCCCCCCCCccCHHHHHHHHHhCCCCcEEEEEEECcccccHHHHHHHHHHHHHHhhccCCceeCCCCCHH
Confidence 99999999998877899999999999999999999999999999999999999999999999999999999999876653
No 7
>2vvg_A Kinesin-2; motor protein, nucleotide-binding, microtubule, ATP-binding; HET: ADP; 1.60A {Giardia intestinalis}
Probab=100.00 E-value=1.2e-58 Score=507.09 Aligned_cols=233 Identities=39% Similarity=0.545 Sum_probs=191.3
Q ss_pred CCcHHHHHHHHHHHHHh-cCCCeEEEEEEEEEEEcCceeecCCCCCCCceeeeCCCCCeEecccEEEEecCHHHHHHHHH
Q 003184 2 TGITECTVADIFDYIHR-HEERAFVLKFSAMEIYNEAIRDLLSTDNTPLRLLDDPEKGVVVEKVTEEILKDWNHLKELLS 80 (841)
Q Consensus 2 ~GIIprav~dLF~~Ie~-~~e~efsV~vSylEIYNE~V~DLLs~~~~~L~I~ed~~~gv~V~gLtev~V~S~eel~~LL~ 80 (841)
+|||||++++||+.|+. ..+..|.|++||+|||||+|+|||++ ..++.+++|+.+|++|.||+++.|.+++|++.+|.
T Consensus 114 ~Giipr~~~~lF~~i~~~~~~~~~~v~vS~~EIYnE~i~DLL~~-~~~l~i~e~~~~~~~v~gl~~~~v~s~~e~~~ll~ 192 (350)
T 2vvg_A 114 PGAIPNSFKHLFDAINSSSSNQNFLVIGSYLELYNEEIRDLIKN-NTKLPLKEDKTRGIYVDGLSMHRVTTAAELSALMD 192 (350)
T ss_dssp BCHHHHHHHHHHHHHHTCCTTEEEEEEEEEEEEETTEEEETTTT-EEEECEEEETTTEEEETTCCCEEESSHHHHHHHHH
T ss_pred CchHHHHHHHHHHHHHhhccCCcEEEEEEEEEEeCCEEEEcccC-CcCceeeEcCCCCEEecCCEEEEcCCHHHHHHHHH
Confidence 79999999999999985 44779999999999999999999983 46799999999999999999999999999999999
Q ss_pred HHHhhcccccccccCCCCCceeEEEEEEeeccccccCCCCcceeEeeeeEeecCCCcccccccchhhhhhhhcccccchH
Q 003184 81 ICEAQRRIGETLLNEKSSRSHQIIRLMIESSAREFLGKENSTTLSASVNFVDLAGSERASQALSTGARLKEGCHINRSLL 160 (841)
Q Consensus 81 ~G~~~R~~~sT~lN~~SSRSH~IftL~Ve~~~~e~~~~~~~~~~~SrL~fVDLAGSER~~kt~s~g~rlkEg~~INkSLl 160 (841)
.|.++|++++|.+|..|||||+||+|+|++.... ........++|+|||||||||.+++++.|.+++|+.+||+||+
T Consensus 193 ~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~---~~~~~~~~skl~lVDLAGSEr~~~t~~~g~rl~E~~~IN~SL~ 269 (350)
T 2vvg_A 193 KGFANRHVAATQMNDTSSRSHSIFMVRIECSEVI---ENKEVIRVGKLNLVDLAGSERQSKTGATGETLVEGAKINLSLS 269 (350)
T ss_dssp HHHHHC----------CTTCEEEEEEEEEEEEC-------CEEEEEEEEEEECCCCCC---------------CTTHHHH
T ss_pred HHHhccccccccCCCCCCcceEEEEEEEEEeecc---CCCccEEEEEEEEEeCCCCCccccccccHHHHHHHHHHhHHHH
Confidence 9999999999999999999999999999875432 2233467899999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcCCCCcccCCChhhhhccccccCCCccceEEeecCCCCCCHHHHHHHHHHHHHhcccccceeeccccCH
Q 003184 161 TLSTVIRKLSKGRNGHINYRDSKLTRMLQPCLGGNARTAIICTLSPARSHVEQTRNTLLFACCAKEVTTKAQVNVVMSD 239 (841)
Q Consensus 161 aLg~VI~aLs~gk~~hIPYRDSKLTrLLqdSLGGNsrT~mIa~ISPa~~~~eETLsTLrFAsrAK~I~n~p~vN~~~s~ 239 (841)
+||+||.+|++++ .|||||||||||||||+|||||+|+|||||||+..+++||++||+||+|||+|+|+|++|....+
T Consensus 270 aLg~vI~aL~~~~-~hvPyRdSkLT~lLqdsLgGnskt~mI~~isP~~~~~~ETl~TL~fA~rak~i~n~~~~n~~~~~ 347 (350)
T 2vvg_A 270 ALGLVISKLVEGA-THIPYRDSKLTRLLQDSLGGNSKTLMCANISPASTNYDETMSTLRYADRAKQIKNKPRINEDPKD 347 (350)
T ss_dssp HHHHHHHHHHHTC-SSCCGGGCHHHHHTTTTTTSSSEEEEEEEECCBGGGHHHHHHHHHHHHHHTTCBCCCCCCBSCTT
T ss_pred HHHHHHHHHHcCC-CCCCccccHHHHHHHHhcCCCccEEEEEEeCCccccHHHHHHHHHHHHHHhhccccceecCCchh
Confidence 9999999999875 69999999999999999999999999999999999999999999999999999999999987643
No 8
>2owm_A Nckin3-434, related to kinesin-like protein KIF1C; motor domain, ADP, NECK linker, motor PR; HET: ADP; 3.25A {Neurospora crassa}
Probab=100.00 E-value=2.5e-58 Score=517.98 Aligned_cols=232 Identities=36% Similarity=0.567 Sum_probs=195.3
Q ss_pred CCcHHHHHHHHHHHHHhc----CCCeEEEEEEEEEEEcCceeecCCCCC-----CCceeeeCCCCCeEecccEEEEecCH
Q 003184 2 TGITECTVADIFDYIHRH----EERAFVLKFSAMEIYNEAIRDLLSTDN-----TPLRLLDDPEKGVVVEKVTEEILKDW 72 (841)
Q Consensus 2 ~GIIprav~dLF~~Ie~~----~e~efsV~vSylEIYNE~V~DLLs~~~-----~~L~I~ed~~~gv~V~gLtev~V~S~ 72 (841)
+|||||++++||+.|+.. ++..|.|+|||+|||||+|+|||++.. ..|+|++|+.+|++|.||+++.|.++
T Consensus 161 ~GIipr~~~~lF~~i~~~~~~~~~~~~~V~vS~lEIYnE~i~DLL~~~~~~~~~~~l~ire~~~~g~~V~gl~e~~V~s~ 240 (443)
T 2owm_A 161 PGLIPRTCEDLFQRIASAQDETPNISYNVKVSYFEVYNEHVRDLLAPVVPNKPPYYLKVRESPTEGPYVKDLTEVPVRGL 240 (443)
T ss_dssp CCHHHHHHHHHHHHHHHTTTTSTTCEEEEEEEEEEEETTEEEETTSCCCSSCCCCCCEEEEETTTEEEEETCCCEECCSH
T ss_pred CchHHHHHHHHHHHHHhhhcccCCceEEEEEEEEEEECCEeeEccCccccCCcccccceeECCCCCEeccCCEEEEcCCH
Confidence 799999999999999864 367999999999999999999998732 35999999999999999999999999
Q ss_pred HHHHHHHHHHHhhcccccccccCCCCCceeEEEEEEeeccccccCCCCcceeEeeeeEeecCCCcccccccchhhhhhhh
Q 003184 73 NHLKELLSICEAQRRIGETLLNEKSSRSHQIIRLMIESSAREFLGKENSTTLSASVNFVDLAGSERASQALSTGARLKEG 152 (841)
Q Consensus 73 eel~~LL~~G~~~R~~~sT~lN~~SSRSH~IftL~Ve~~~~e~~~~~~~~~~~SrL~fVDLAGSER~~kt~s~g~rlkEg 152 (841)
+|++.+|..|.++|++++|.||..|||||+||+|+|++..... ..+......++|+|||||||||+.++++.|.+++|+
T Consensus 241 ~e~~~ll~~G~~~R~~~~T~~N~~SSRSH~Ifti~v~~~~~~~-~~~~~~~~~skL~lVDLAGSER~~~t~~~g~rlkE~ 319 (443)
T 2owm_A 241 EEIIRWMRIGDGSRTVASTKMNDTSSRSHAVFTIMLKQIHHDL-ETDDTTERSSRIRLVDLAGSERAKSTEATGQRLREG 319 (443)
T ss_dssp HHHHHHHHHHHTTSCBCSSSSSCBCTTEEEEEEEEEEEEC--------CCEEEEEEEEEECCCCCC--------------
T ss_pred HHHHHHHHHHHhhCCcccCcCCCccCCCeEEEEEEEEEeeccc-CCCCcceEEEEEEEEECCCCccccccCCccccccch
Confidence 9999999999999999999999999999999999998754321 122334578999999999999999999999999999
Q ss_pred cccccchHHHHHHHHHhhcCCC---------------------CcccCCChhhhhccccccCCCccceEEeecCCCCCCH
Q 003184 153 CHINRSLLTLSTVIRKLSKGRN---------------------GHINYRDSKLTRMLQPCLGGNARTAIICTLSPARSHV 211 (841)
Q Consensus 153 ~~INkSLlaLg~VI~aLs~gk~---------------------~hIPYRDSKLTrLLqdSLGGNsrT~mIa~ISPa~~~~ 211 (841)
.+||+||++||+||.+|++++. .|||||||||||||||+|||||+|+|||||||+ ++
T Consensus 320 ~~INkSL~aLg~vI~aL~~~~~~~~~~~~~~~~g~~~~~~~~~~hVPYRdSkLTrLLqdsLgGnskT~mIa~iSP~--~~ 397 (443)
T 2owm_A 320 SNINKSLTTLGRVIAALADPKSSASRPSSPVKSGRGRTPGPANSVVPYRDSVLTWLLKDSLGGNSKTAMIACISPT--DY 397 (443)
T ss_dssp CCSSHHHHHHHHHHHHHCC-------------------------CCCGGGSHHHHHSTTTTTSSCEEEEEEEECSS--CH
T ss_pred hhhcHHHHHHHHHHHHHhcccccccccccccccccccccccCCCcccCcccHhHHHHHHhhCCCCcEEEEEEeccc--cH
Confidence 9999999999999999986532 399999999999999999999999999999997 59
Q ss_pred HHHHHHHHHHHHhcccccceeeccc
Q 003184 212 EQTRNTLLFACCAKEVTTKAQVNVV 236 (841)
Q Consensus 212 eETLsTLrFAsrAK~I~n~p~vN~~ 236 (841)
+||++||+||+|||+|+|+|++|.+
T Consensus 398 ~ETlsTLrfA~rak~I~n~~~vN~~ 422 (443)
T 2owm_A 398 DETLSTLRYADQAKRIRTRAVVNQV 422 (443)
T ss_dssp HHHHHHHHHHHHHTTCEECCCCCCC
T ss_pred HHHHHHHHHHHHHhhccccceeccc
Confidence 9999999999999999999999985
No 9
>2zfi_A Kinesin-like protein KIF1A, kinesin heavy chain isoform 5C; alpha and beta protein, enzyme, ATPase, P-loop, motor protein, ATP-binding, coiled coil; HET: ADP; 1.55A {Mus musculus} SCOP: c.37.1.9 PDB: 1vfw_A* 1vfx_A* 1vfz_A* 1vfv_A* 2zfj_A* 2zfk_A* 2zfl_A* 2zfm_A* 1i5s_A* 1i6i_A* 2hxf_C* 1ia0_K* 2hxh_C*
Probab=100.00 E-value=2.1e-58 Score=507.83 Aligned_cols=233 Identities=36% Similarity=0.553 Sum_probs=197.4
Q ss_pred CCcHHHHHHHHHHHHHhcC--CCeEEEEEEEEEEEcCceeecCCCCC-CCceeeeCCCCCeEecccEEEEecCHHHHHHH
Q 003184 2 TGITECTVADIFDYIHRHE--ERAFVLKFSAMEIYNEAIRDLLSTDN-TPLRLLDDPEKGVVVEKVTEEILKDWNHLKEL 78 (841)
Q Consensus 2 ~GIIprav~dLF~~Ie~~~--e~efsV~vSylEIYNE~V~DLLs~~~-~~L~I~ed~~~gv~V~gLtev~V~S~eel~~L 78 (841)
+|||||++++||+.|+... +..|.|+|||+|||||+|+|||++.. ..|+|++|+.+|++|+||+++.|.+++|++.+
T Consensus 116 ~Giipr~~~~lF~~i~~~~~~~~~~~v~vS~~EIYnE~v~DLL~~~~~~~l~ire~~~~g~~v~gl~~~~V~s~~e~~~l 195 (366)
T 2zfi_A 116 QGIIPQLCEDLFSRINDTTNDNMSYSVEVSYMEIYCERVRDLLNPKNKGNLRVREHPLLGPYVEDLSKLAVTSYNDIQDL 195 (366)
T ss_dssp BCHHHHHHHHHHHHHHTCCCTTEEEEEEEEEEEEETTEEEETTCTTTCSCBCEEEETTTEEEETTCCCEECCSHHHHHHH
T ss_pred CccHHHHHHHHHHHHhhcccCCeeEEEEEEEEEeeCCeEEEccccccCCCceEEEcCCCCEEEeCCEEEEECCHHHHHHH
Confidence 6999999999999998754 56899999999999999999999865 47999999999999999999999999999999
Q ss_pred HHHHHhhcccccccccCCCCCceeEEEEEEeeccccccCCCCcceeEeeeeEeecCCCcccccccchhhhhhhhcccccc
Q 003184 79 LSICEAQRRIGETLLNEKSSRSHQIIRLMIESSAREFLGKENSTTLSASVNFVDLAGSERASQALSTGARLKEGCHINRS 158 (841)
Q Consensus 79 L~~G~~~R~~~sT~lN~~SSRSH~IftL~Ve~~~~e~~~~~~~~~~~SrL~fVDLAGSER~~kt~s~g~rlkEg~~INkS 158 (841)
|..|.++|++++|.+|..|||||+||+|+|++..... .........++|+|||||||||+.++++.|.|++|+.+||+|
T Consensus 196 l~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~~-~~~~~~~~~skL~lVDLAGSEr~~~t~~~g~rl~E~~~INkS 274 (366)
T 2zfi_A 196 MDSGNKPRTVAATNMNETSSRSHAVFNIIFTQKRHDA-ETNITTEKVSKISLVDLAGSERADSTGAKGTRLKEGANINKS 274 (366)
T ss_dssp HHHHHHHHTSGGGGTTTHHHHSEEEEEEEEEEEEECT-TTTCEEEEEEEEEEEECCCGGGC------CCCHHHHHHHHHH
T ss_pred HHHHhhccccccccCCCCCCcceEEEEEEEEEecccC-CCCccceeEeEEEEEeCCCCccccccCCCccchhhhhhHhHH
Confidence 9999999999999999999999999999998754321 112234568999999999999999999999999999999999
Q ss_pred hHHHHHHHHHhhcC-----------CCCcccCCChhhhhccccccCCCccceEEeecCCCCCCHHHHHHHHHHHHHhccc
Q 003184 159 LLTLSTVIRKLSKG-----------RNGHINYRDSKLTRMLQPCLGGNARTAIICTLSPARSHVEQTRNTLLFACCAKEV 227 (841)
Q Consensus 159 LlaLg~VI~aLs~g-----------k~~hIPYRDSKLTrLLqdSLGGNsrT~mIa~ISPa~~~~eETLsTLrFAsrAK~I 227 (841)
|++||+||.+|+.+ +..|||||||||||||||+|||||+|+|||||||+..+++||++||+||+|||+|
T Consensus 275 L~aLg~vI~aL~~~~~~~~~~~~~~~~~hvPyRdSkLT~lLqdsLgGnskt~mIa~isP~~~~~~ETlsTLrfA~rak~I 354 (366)
T 2zfi_A 275 LTTLGKVISALAEMDSGPNKNKKKKKTDFIPYRDSVLTWLLRENLGGNSRTAMVAALSPADINYDETLSTLRYADRAKQI 354 (366)
T ss_dssp HHHHHHHHHHHHHHC--------------CCGGGSHHHHHTGGGSSTTCEEEEEEEECCBGGGHHHHHHHHHHHHHTC--
T ss_pred HHHHHHHHHHHHhcccccccccccccCCcccccccHHHHHHHHHhCCCceEEEEEEeCCCcccHHHHHHHHHHHHHHhhc
Confidence 99999999999863 3469999999999999999999999999999999999999999999999999999
Q ss_pred ccceeecc
Q 003184 228 TTKAQVNV 235 (841)
Q Consensus 228 ~n~p~vN~ 235 (841)
+|+|.++.
T Consensus 355 ~~~~~~~~ 362 (366)
T 2zfi_A 355 RNTVSVNH 362 (366)
T ss_dssp --------
T ss_pred cCCCCCCC
Confidence 99998874
No 10
>1x88_A Kinesin-like protein KIF11; switch II, motor domain, NECK linker, cell cycle; HET: ADP NAT; 1.80A {Homo sapiens} SCOP: c.37.1.9 PDB: 3hqd_A* 3ken_A* 2pg2_A* 1yrs_A* 2fme_A* 2g1q_A* 2gm1_A* 1ii6_A* 2uyi_A* 2uym_A* 2wog_A* 2x2r_A* 2x7c_A* 2x7d_A* 2x7e_A* 2xae_A* 3k3b_A* 3k5e_A* 3l9h_A* 1q0b_A* ...
Probab=100.00 E-value=2.7e-58 Score=505.85 Aligned_cols=230 Identities=37% Similarity=0.557 Sum_probs=195.5
Q ss_pred CCcHHHHHHHHHHHHHhcCCCeEEEEEEEEEEEcCceeecCCCCC---CCceeeeCCC--CCeEecccEEEEecCHHHHH
Q 003184 2 TGITECTVADIFDYIHRHEERAFVLKFSAMEIYNEAIRDLLSTDN---TPLRLLDDPE--KGVVVEKVTEEILKDWNHLK 76 (841)
Q Consensus 2 ~GIIprav~dLF~~Ie~~~e~efsV~vSylEIYNE~V~DLLs~~~---~~L~I~ed~~--~gv~V~gLtev~V~S~eel~ 76 (841)
+|||||++++||+.|.. .+.+|.|+|||+|||||+|+|||++.. ..+.+++++. +|++|.||+++.|.+++|++
T Consensus 124 ~Giipr~~~~lF~~i~~-~~~~~~v~vS~~EIYnE~i~DLL~~~~~~~~~l~i~~~~~~~~~v~v~gl~~~~v~s~~e~~ 202 (359)
T 1x88_A 124 AGIIPRTLHQIFEKLTD-NGTEFSVKVSLLEIYNEELFDLLNPSSDVSERLQMFDDPRNKRGVIIKGLEEITVHNKDEVY 202 (359)
T ss_dssp BCHHHHHHHHHHHHTSS-SSEEEEEEEEEEEEETTEEEETTCTTSCTTCCBEEEEETTEEEEEEEETCCCEEECSGGGHH
T ss_pred CCchHHHHHHHHHHHhc-cCceEEEEEEEEEEeCceeeehhcccccccccceEEeccCCCCCEEEcCCEEEEcCCHHHHH
Confidence 69999999999999975 567999999999999999999998764 4689999984 78999999999999999999
Q ss_pred HHHHHHHhhcccccccccCCCCCceeEEEEEEeeccccccCCCCcceeEeeeeEeecCCCcccccccchhhhhhhhcccc
Q 003184 77 ELLSICEAQRRIGETLLNEKSSRSHQIIRLMIESSAREFLGKENSTTLSASVNFVDLAGSERASQALSTGARLKEGCHIN 156 (841)
Q Consensus 77 ~LL~~G~~~R~~~sT~lN~~SSRSH~IftL~Ve~~~~e~~~~~~~~~~~SrL~fVDLAGSER~~kt~s~g~rlkEg~~IN 156 (841)
.+|..|.++|++++|.||..|||||+||+|+|.+.... ..+......++|+|||||||||.+++++.|.+++|+.+||
T Consensus 203 ~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~i~~~~~~--~~~~~~~~~skL~lVDLAGSEr~~~t~~~g~rl~E~~~IN 280 (359)
T 1x88_A 203 QILEKGAAKRTTAATLMNAYSSRSHSVFSVTIHMKETT--IDGEELVKIGKLNLVDLAGSENIGRSGAVDKRAREAGNIN 280 (359)
T ss_dssp HHHHHHHHHHHHHHHHSTTHHHHCEEEEEEEEEEEEEC--TTSCEEEEEEEEEEEECCCCCC---------------CCC
T ss_pred HHHHHHHhhcccccccCCCCCCCccEEEEEEEEEeccc--CCCCceEEEEEEEEEcCCCCCcccccCCcccchHHHhhhh
Confidence 99999999999999999999999999999999875332 1223345789999999999999999999999999999999
Q ss_pred cchHHHHHHHHHhhcCCCCcccCCChhhhhccccccCCCccceEEeecCCCCCCHHHHHHHHHHHHHhcccccceeecc
Q 003184 157 RSLLTLSTVIRKLSKGRNGHINYRDSKLTRMLQPCLGGNARTAIICTLSPARSHVEQTRNTLLFACCAKEVTTKAQVNV 235 (841)
Q Consensus 157 kSLlaLg~VI~aLs~gk~~hIPYRDSKLTrLLqdSLGGNsrT~mIa~ISPa~~~~eETLsTLrFAsrAK~I~n~p~vN~ 235 (841)
+||++||+||.+|+++ ..|||||||||||||||+|||||+|+|||||||+..+++||++||+||+|||+|+|+|++|+
T Consensus 281 kSL~aLg~vI~aL~~~-~~hvPyRdSkLT~lLqdsLgGnskt~mIa~vsP~~~~~~ETl~TLrfA~rak~I~n~p~vn~ 358 (359)
T 1x88_A 281 QSLLTLGRVITALVER-TPHVPYRESKLTRILQDSLGGRTRTSIIATISPASLNLEETLSTLEYAHRAKNILNKPEVNQ 358 (359)
T ss_dssp HHHHHHHHHHHHHHTT-CSCCCGGGSHHHHHTGGGSSSSSEEEEEEEECCCGGGHHHHHHHHHHHHHHTTCCCCCC---
T ss_pred HHHHHHHHHHHHHhcC-CCCCccccchHHHHHHHHhCCCCeEEEEEEECCCcccHHHHHHHHHHHHHHhhccCcceeCC
Confidence 9999999999999975 46999999999999999999999999999999999999999999999999999999999985
No 11
>1bg2_A Kinesin; motor protein, ATPase, microtubule associated; HET: ADP; 1.80A {Homo sapiens} SCOP: c.37.1.9 PDB: 2p4n_K* 1mkj_A* 2kin_A* 3kin_A*
Probab=100.00 E-value=1.2e-57 Score=494.81 Aligned_cols=220 Identities=38% Similarity=0.546 Sum_probs=208.1
Q ss_pred CCcHHHHHHHHHHHHHhc-CCCeEEEEEEEEEEEcCceeecCCCCCCCceeeeCCCCCeEecccEEEEecCHHHHHHHHH
Q 003184 2 TGITECTVADIFDYIHRH-EERAFVLKFSAMEIYNEAIRDLLSTDNTPLRLLDDPEKGVVVEKVTEEILKDWNHLKELLS 80 (841)
Q Consensus 2 ~GIIprav~dLF~~Ie~~-~e~efsV~vSylEIYNE~V~DLLs~~~~~L~I~ed~~~gv~V~gLtev~V~S~eel~~LL~ 80 (841)
+|||||++++||+.|... ++.+|.|+|||+|||||+|+|||++...++.+++|+.++++|.|++++.|.+++|++.+|.
T Consensus 105 ~Giipr~~~~lF~~i~~~~~~~~~~v~vS~~EIYnE~v~DLL~~~~~~l~i~e~~~~~~~v~gl~~~~v~s~~e~~~ll~ 184 (325)
T 1bg2_A 105 MGIIPRIVQDIFNYIYSMDENLEFHIKVSYFEIYLDKIRDLLDVSKTNLSVHEDKNRVPYVKGCTERFVCSPDEVMDTID 184 (325)
T ss_dssp BCHHHHHHHHHHHHHHHHCSSEEEEEEEEEEEEETTEEEESSCTTCCSBCEEECTTSCEEETTCCCEEECSHHHHHHHHH
T ss_pred CccHHHHHHHHHHHHHhccCCceEEEEEEEEEEecCeeeecccCCCCCceEEECCCCCEEecCceEEeCCCHHHHHHHHH
Confidence 599999999999999864 4679999999999999999999999888999999999999999999999999999999999
Q ss_pred HHHhhcccccccccCCCCCceeEEEEEEeeccccccCCCCcceeEeeeeEeecCCCcccccccchhhhhhhhcccccchH
Q 003184 81 ICEAQRRIGETLLNEKSSRSHQIIRLMIESSAREFLGKENSTTLSASVNFVDLAGSERASQALSTGARLKEGCHINRSLL 160 (841)
Q Consensus 81 ~G~~~R~~~sT~lN~~SSRSH~IftL~Ve~~~~e~~~~~~~~~~~SrL~fVDLAGSER~~kt~s~g~rlkEg~~INkSLl 160 (841)
.|.++|++++|.+|..|||||+||+|+|++... .......++|+|||||||||.+++++.|.+++|+.+||+||+
T Consensus 185 ~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~-----~~~~~~~skl~lVDLAGSEr~~~t~~~g~rl~E~~~IN~SL~ 259 (325)
T 1bg2_A 185 EGKSNRHVAVTNMNEHSSRSHSIFLINVKQENT-----QTEQKLSGKLYLVDLAGSEKVSKTGAEGAVLDEAKNINKSLS 259 (325)
T ss_dssp HHHHHTTTTCSCHHHHHHHSEEEEEEEEEEEET-----TTCCEEEEEEEEEECCCSCCCCCCSSSCTTSCCCCCCCHHHH
T ss_pred HHHhhCceeecCCCCCCCCCeEEEEEEEEEEec-----CCCcEEEEEEEEEECCCCCcccccCCccccchHHHHHHHHHH
Confidence 999999999999999999999999999987532 233457899999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcCCCCcccCCChhhhhccccccCCCccceEEeecCCCCCCHHHHHHHHHHHHHhccc
Q 003184 161 TLSTVIRKLSKGRNGHINYRDSKLTRMLQPCLGGNARTAIICTLSPARSHVEQTRNTLLFACCAKEV 227 (841)
Q Consensus 161 aLg~VI~aLs~gk~~hIPYRDSKLTrLLqdSLGGNsrT~mIa~ISPa~~~~eETLsTLrFAsrAK~I 227 (841)
+||+||.+|+++ ..|||||||||||||||+|||||+|+|||||||+..+++||++||+||+|||+|
T Consensus 260 aLg~vI~aL~~~-~~hvPyRdSkLT~lLqdsLgGns~t~mia~vsP~~~~~~ETl~TL~fa~rak~I 325 (325)
T 1bg2_A 260 ALGNVISALAEG-STYVPYRDSKMTRILQDSLGGNCRTTIVICCSPSSYNESETKSTLLFGQRAKTI 325 (325)
T ss_dssp HHHHHHHHHHTT-CSCCCGGGSHHHHHGGGTSSSSCEEEEEEEECCBGGGHHHHHHHHHHHHTSCCC
T ss_pred HHHHHHHHHHcC-CCCCcccccHHHHHHHHHhCCCCcEEEEEEECCccccHHHHHHHHHHHHHhccC
Confidence 999999999986 459999999999999999999999999999999999999999999999999987
No 12
>2wbe_C Bipolar kinesin KRP-130; EG5, KLP61F, tubulin, mitosis, GTP-binding, motor protein, cell division, cell cycle, microtubule, ATP-binding; HET: GTP ANP GDP TA1; 9.40A {Drosophila melanogaster}
Probab=100.00 E-value=1.1e-57 Score=503.09 Aligned_cols=233 Identities=36% Similarity=0.580 Sum_probs=195.4
Q ss_pred CCcHHHHHHHHHHHHHhcCCCeEEEEEEEEEEEcCceeecCCCCC-CCceeeeCC--CCCeEecccEEEEecCHHHHHHH
Q 003184 2 TGITECTVADIFDYIHRHEERAFVLKFSAMEIYNEAIRDLLSTDN-TPLRLLDDP--EKGVVVEKVTEEILKDWNHLKEL 78 (841)
Q Consensus 2 ~GIIprav~dLF~~Ie~~~e~efsV~vSylEIYNE~V~DLLs~~~-~~L~I~ed~--~~gv~V~gLtev~V~S~eel~~L 78 (841)
+|||||++++||+.|... +.+|.|+|||+|||||+|+|||++.. ..+++++|+ .++++|.||+++.|.+++|++.+
T Consensus 136 ~Giipr~~~~lF~~i~~~-~~~~~v~vS~~EIYnE~i~DLL~~~~~~~l~i~~~~~~~g~v~v~gl~~~~V~s~~e~~~l 214 (373)
T 2wbe_C 136 IGIIPRALSHLFDELRMM-EVEYTMRISYLELYNEELCDLLSTDDTTKIRIFDDSTKKGSVIIQGLEEIPVHSKDDVYKL 214 (373)
T ss_dssp BCHHHHHHHHHHHHHHHC-CSCEEEEEEEEEEETTEEEESSCTTSCSCCCEEECSSSSSCEEETTCCCEEESSHHHHHHH
T ss_pred CcChHHHHHHHHHHHHhc-CceEEEEEEEEEEeCCeEEECCCCCCCCCceeEeccCCCCcEEecCceEEccCCHHHHHHH
Confidence 699999999999999864 57999999999999999999998764 478888885 56799999999999999999999
Q ss_pred HHHHHhhcccccccccCCCCCceeEEEEEEeeccccccCCCCcceeEeeeeEeecCCCcccccccch-hhhhhhhccccc
Q 003184 79 LSICEAQRRIGETLLNEKSSRSHQIIRLMIESSAREFLGKENSTTLSASVNFVDLAGSERASQALST-GARLKEGCHINR 157 (841)
Q Consensus 79 L~~G~~~R~~~sT~lN~~SSRSH~IftL~Ve~~~~e~~~~~~~~~~~SrL~fVDLAGSER~~kt~s~-g~rlkEg~~INk 157 (841)
|..|.++|++++|.+|..|||||+||+|+|++..... ........++|+|||||||||..++++. |.|++|+.+||+
T Consensus 215 l~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~~--~~~~~~~~skL~lVDLAGSEr~~~t~~~~g~rl~E~~~INk 292 (373)
T 2wbe_C 215 LEKGKERRKTATTLMNAQSSRSHTVFSIVVHIRENGI--EGEDMLKIGKLNLVDLAGSENVSKAGNEKGIRVRETVNINQ 292 (373)
T ss_dssp HHHHHHHHTTTCSCHHHHHHHSEEEEEEEEEECTTCT--TTCCEEEEEEEEEEECCCC--------------------CH
T ss_pred HHHHhhhhccccccCCCCCCCccEEEEEEEEEecCCC--CCCcceeEEEEEEEECCCCCccccccCccccchhHHHHHHH
Confidence 9999999999999999999999999999998753321 2233457899999999999999999887 999999999999
Q ss_pred chHHHHHHHHHhhcCCCCcccCCChhhhhccccccCCCccceEEeecCCCCCCHHHHHHHHHHHHHhcccccceeecccc
Q 003184 158 SLLTLSTVIRKLSKGRNGHINYRDSKLTRMLQPCLGGNARTAIICTLSPARSHVEQTRNTLLFACCAKEVTTKAQVNVVM 237 (841)
Q Consensus 158 SLlaLg~VI~aLs~gk~~hIPYRDSKLTrLLqdSLGGNsrT~mIa~ISPa~~~~eETLsTLrFAsrAK~I~n~p~vN~~~ 237 (841)
||++||+||.+|+++ ..|||||||||||||||+|||||+|+|||||||+..+++||++||+||+|||+|+|+|++|+..
T Consensus 293 SL~aLg~vI~aL~~~-~~hvPyRdSkLT~lLqdsLgGnskt~mIa~isP~~~~~~ETlsTLrfA~rak~I~n~p~vN~~~ 371 (373)
T 2wbe_C 293 SLLTLGRVITALVDR-APHVPYRESKLTRLLQESLGGRTKTSIIATISPGHKDIEETLSTLEYAHRAKNIQNKPEVNQKL 371 (373)
T ss_dssp HHHHHHHHHHHHHHC-SSCCCGGGCHHHHHTHHHHHSSSEEEEEEEECCBGGGHHHHHHHHHHHHHHHTCEECCCCCEEC
T ss_pred HHHHHHHHHHHHHcC-CCcCccccchHHHHHHHHhCCCceEEEEEEeCCCcccHHHHHHHHHHHHHHhhccccceecccc
Confidence 999999999999975 4599999999999999999999999999999999999999999999999999999999999875
Q ss_pred C
Q 003184 238 S 238 (841)
Q Consensus 238 s 238 (841)
+
T Consensus 372 s 372 (373)
T 2wbe_C 372 T 372 (373)
T ss_dssp C
T ss_pred C
Confidence 4
No 13
>4a14_A Kinesin, kinesin-like protein KIF7; motor protein, motor domain; HET: ADP; 1.60A {Homo sapiens} SCOP: c.37.1.0 PDB: 2xt3_A*
Probab=100.00 E-value=6.7e-57 Score=492.37 Aligned_cols=224 Identities=39% Similarity=0.557 Sum_probs=185.7
Q ss_pred CCcHHHHHHHHHHHHHhcCCCeEEEEEEEEEEEcCceeecCCCCC--CCceeeeCCCCCeEecccEEEEecCHHHHHHHH
Q 003184 2 TGITECTVADIFDYIHRHEERAFVLKFSAMEIYNEAIRDLLSTDN--TPLRLLDDPEKGVVVEKVTEEILKDWNHLKELL 79 (841)
Q Consensus 2 ~GIIprav~dLF~~Ie~~~e~efsV~vSylEIYNE~V~DLLs~~~--~~L~I~ed~~~gv~V~gLtev~V~S~eel~~LL 79 (841)
+|||||++++||+.|++.+..+|.|+|||+|||||+|+|||++.. .++.+++|+.++++|.||+++.|.+++|++.+|
T Consensus 114 ~Giipr~~~~lF~~i~~~~~~~~~v~vS~~EIYnE~i~DLL~~~~~~~~l~i~e~~~~~~~v~gl~~~~v~s~~e~~~ll 193 (344)
T 4a14_A 114 QGIVPRAMAEAFKLIDENDLLDCLVHVSYLEVYKEEFRDLLEVGTASRDIQLREDERGNVVLCGVKEVDVEGLDEVLSLL 193 (344)
T ss_dssp CCHHHHHHHHHHHHHHHCTTSEEEEEEEEEEEETTEEEETTSSCCCGGGCEEEECTTSCEEEESCCCEECCSHHHHHHHH
T ss_pred cCCchHHHHHHHHhcccccceeeEEEEehhhhhHHHHHHHHHhccccccceeeeccCCCEEEEeeeeccccCHHHHHHHH
Confidence 699999999999999998889999999999999999999998643 479999999999999999999999999999999
Q ss_pred HHHHhhcccccccccCCCCCceeEEEEEEeeccccccC---CCCcceeEeeeeEeecCCCcccccccchhhhhhhhcccc
Q 003184 80 SICEAQRRIGETLLNEKSSRSHQIIRLMIESSAREFLG---KENSTTLSASVNFVDLAGSERASQALSTGARLKEGCHIN 156 (841)
Q Consensus 80 ~~G~~~R~~~sT~lN~~SSRSH~IftL~Ve~~~~e~~~---~~~~~~~~SrL~fVDLAGSER~~kt~s~g~rlkEg~~IN 156 (841)
..|.++|++++|.+|..|||||+||+|+|++....... ........++|+|||||||||..++++.|.+++|+.+||
T Consensus 194 ~~g~~~R~~~~T~~N~~SSRSH~If~i~v~~~~~~~~~~~~~~~~~~~~skl~lVDLAGSEr~~~t~~~g~rl~E~~~IN 273 (344)
T 4a14_A 194 EMGNAARHTGATHLNHLSSRSHTVFTVTLEQRGRAPSRLPRPAPGQLLVSKFHFVDLAGSERVLKTGSTGERLKESIQIN 273 (344)
T ss_dssp HHHHHHHHC------CCGGGSEEEEEEEEEEEC------------CEEEEEEEEEECCCCCCC--------------CCC
T ss_pred HhcchhcccCcchhhhcccccceEEEEEeeeCCCCcccCCCccccceeeeeeeEEecccchhhcccCCchhhhhhheeec
Confidence 99999999999999999999999999999886432111 122346789999999999999999999999999999999
Q ss_pred cchHHHHHHHHHhhcC--CCCcccCCChhhhhccccccCCCccceEEeecCCCCCCHHHHHHHHHHHHHhc
Q 003184 157 RSLLTLSTVIRKLSKG--RNGHINYRDSKLTRMLQPCLGGNARTAIICTLSPARSHVEQTRNTLLFACCAK 225 (841)
Q Consensus 157 kSLlaLg~VI~aLs~g--k~~hIPYRDSKLTrLLqdSLGGNsrT~mIa~ISPa~~~~eETLsTLrFAsrAK 225 (841)
+||++||+||.+|+++ +..|||||||||||||||+|||||+|+|||||||+..+++||++||+||+|||
T Consensus 274 ~SL~aLg~vI~aL~~~~~~~~hvPyRdSkLT~lLqdsLgGnskt~mI~~vsP~~~~~~ETl~TL~fA~rAk 344 (344)
T 4a14_A 274 SSLLALGNVISALGDPQRRGSHIPYRDSKITRILKDSLGGNAKTVMIACVSPSSSDFDETLNTLNYASRAQ 344 (344)
T ss_dssp SHHHHHHHHHHHHTCTTTTTSCCCGGGCHHHHHTTTSSSTTSEEEEEEEECCBGGGHHHHHHHHHHHHHTC
T ss_pred hhHHhhhhHHHhcCCccccCCCCCcchhhHHHHhHhhcCCCcceEEEEEeCCCccchhHHhhhhhhhhhcC
Confidence 9999999999999864 34699999999999999999999999999999999999999999999999997
No 14
>2nr8_A Kinesin-like protein KIF9; motor domain, ADP, structural genomics, structural genomics consortium, SGC, contractIle protein; HET: ADP; 2.00A {Homo sapiens} PDB: 3nwn_A*
Probab=100.00 E-value=3.2e-57 Score=497.01 Aligned_cols=222 Identities=33% Similarity=0.499 Sum_probs=186.2
Q ss_pred CCcHHHHHHHHHHHHHhcCCCeEEEEEEEEEEEcCceeecCCCC------CCCceeeeCCCCCeEecccEEEEecCHHHH
Q 003184 2 TGITECTVADIFDYIHRHEERAFVLKFSAMEIYNEAIRDLLSTD------NTPLRLLDDPEKGVVVEKVTEEILKDWNHL 75 (841)
Q Consensus 2 ~GIIprav~dLF~~Ie~~~e~efsV~vSylEIYNE~V~DLLs~~------~~~L~I~ed~~~gv~V~gLtev~V~S~eel 75 (841)
+|||||++++||+.|++.++..|.|+|||+|||||+|+|||++. ..++.+++++ .|++|+||+++.|.+++|+
T Consensus 131 ~Giipra~~~lF~~i~~~~~~~~~v~vS~~EIYnE~i~DLL~~~~~~~~~~~~l~i~e~~-~g~~v~gl~~~~v~s~~e~ 209 (358)
T 2nr8_A 131 RGILPRALQQVFRMIEERPTHAITVRVSYLEIYNESLFDLLSTLPYVGPSVTPMTIVENP-QGVFIKGLSVHLTSQEEDA 209 (358)
T ss_dssp BCHHHHHHHHHHHHHHTCTTSCEEEEEEEEEEETTEEEETTSSSTTSCTTTSCCEEEEET-TEEEEETCCCEECSSHHHH
T ss_pred CCcHHHHHHHHHHHHhhcCCceEEEEEEEEEEeCCeeeECcCCccccCccCCceEEEECC-CceEecCCEEEEcCCHHHH
Confidence 79999999999999999888999999999999999999999863 3579999998 7899999999999999999
Q ss_pred HHHHHHHHhhcccccccccCCCCCceeEEEEEEeeccccccCCCCcceeEeeeeEeecCCCcccccccchhhhhhhhccc
Q 003184 76 KELLSICEAQRRIGETLLNEKSSRSHQIIRLMIESSAREFLGKENSTTLSASVNFVDLAGSERASQALSTGARLKEGCHI 155 (841)
Q Consensus 76 ~~LL~~G~~~R~~~sT~lN~~SSRSH~IftL~Ve~~~~e~~~~~~~~~~~SrL~fVDLAGSER~~kt~s~g~rlkEg~~I 155 (841)
+.+|..|.++|++++|.+|..|||||+||+|+|++.... ........++|+|||||||||+.++++.|.+++|+.+|
T Consensus 210 ~~ll~~g~~~R~~~~T~~N~~SSRSH~If~i~v~~~~~~---~~~~~~~~skL~lVDLAGSEr~~~t~~~g~rl~E~~~I 286 (358)
T 2nr8_A 210 FSLLFEGETNRIIASHTMNKNSSRSHCIFTIYLEAHSRT---LSEEKYITSKINLVDLAGSERLGKSGSEGQVLKEATYI 286 (358)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCGGGCEEEEEEEEEEC----------CCEEEEEEEEECCCCC----------------CC
T ss_pred HHHHHHHHhccccccccCCCCCCcCeEEEEEEEEEEecc---CCCCCEEEEEEEEEECCCCCcccccCCchhhHHHHHHH
Confidence 999999999999999999999999999999999876432 12234568999999999999999999999999999999
Q ss_pred ccchHHHHHHHHHhhcCCCCcccCCChhhhhccccccCCCccceEEeecCCCCCCHHHHHHHHHHHHHhccc
Q 003184 156 NRSLLTLSTVIRKLSKGRNGHINYRDSKLTRMLQPCLGGNARTAIICTLSPARSHVEQTRNTLLFACCAKEV 227 (841)
Q Consensus 156 NkSLlaLg~VI~aLs~gk~~hIPYRDSKLTrLLqdSLGGNsrT~mIa~ISPa~~~~eETLsTLrFAsrAK~I 227 (841)
|+||++||+||.+|++++..||||||||||+||||+|||||+|+|||||||+..+++||++||+||+|||.|
T Consensus 287 NkSL~aLg~vI~aL~~~~~~hiPyRdSkLT~LLqdsLgGnskt~mIa~isP~~~~~~ETlsTLrfA~Rak~I 358 (358)
T 2nr8_A 287 NKSLSFLEQAIIALGDQKRDHIPFRQCKLTHALKDSLGGNCNMVLVTNIYGEAAQLEETLSSLRFASRMKLV 358 (358)
T ss_dssp STHHHHHHHHHHHHHC-----CCGGGSHHHHHTHHHHSSSSEEEEEEEECCSGGGHHHHHHHHHHHTTGGGC
T ss_pred HHHHHHHHHHHHHHHhCCCCcCCCccCHHHHHHHHhcCCCCeEEEEEEeCCchhhHHHHHHHHHHHHHhccC
Confidence 999999999999999877779999999999999999999999999999999999999999999999999986
No 15
>3lre_A Kinesin-like protein KIF18A; motor protein, nucleotide binding, microtubule binding, ATP- cell projection, cytoskeleton, glycoprotein, microtubule; HET: ADP; 2.20A {Homo sapiens} SCOP: c.37.1.0
Probab=100.00 E-value=6.3e-57 Score=494.39 Aligned_cols=223 Identities=38% Similarity=0.556 Sum_probs=180.3
Q ss_pred CCcHHHHHHHHHHHHHhcC-CCeEEEEEEEEEEEcCceeecCCCCCCCceeeeCCCCCeEecccEEEEecCHHHHHHHHH
Q 003184 2 TGITECTVADIFDYIHRHE-ERAFVLKFSAMEIYNEAIRDLLSTDNTPLRLLDDPEKGVVVEKVTEEILKDWNHLKELLS 80 (841)
Q Consensus 2 ~GIIprav~dLF~~Ie~~~-e~efsV~vSylEIYNE~V~DLLs~~~~~L~I~ed~~~gv~V~gLtev~V~S~eel~~LL~ 80 (841)
+|||||++++||+.|++.. +..|.|+|||+|||||+|+|||++. .++.+++|+.+|++|.||+++.|.+++|++.+|.
T Consensus 130 ~Giipr~~~~lf~~i~~~~~~~~~~v~vS~~EIYnE~i~DLL~~~-~~l~ire~~~~~~~v~gl~~~~v~s~~e~~~ll~ 208 (355)
T 3lre_A 130 PGVMYLTMLHLYKCMDEIKEEKICSTAVSYLEVYNEQIRDLLVNS-GPLAVREDTQKGVVVHGLTLHQPKSSEEILHLLD 208 (355)
T ss_dssp BCHHHHHHHHHHHHHHHTTTTEEEEEEEEEEEEETTEEEESSSCC-CCBEEEECTTSCEEEETCCCBCCCSHHHHHHHHH
T ss_pred CCeeehhhhHHHHhhhhhccCceEEEEEEEEEEECCEEEECcCCC-CCceeEEcCCCCEEeeeeeEEecCCHHHHHHHHH
Confidence 7999999999999999765 5689999999999999999999864 6899999999999999999999999999999999
Q ss_pred HHHhhcccccccccCCCCCceeEEEEEEeeccccccCCCCcceeEeeeeEeecCCCcccccccchhhhhhhhcccccchH
Q 003184 81 ICEAQRRIGETLLNEKSSRSHQIIRLMIESSAREFLGKENSTTLSASVNFVDLAGSERASQALSTGARLKEGCHINRSLL 160 (841)
Q Consensus 81 ~G~~~R~~~sT~lN~~SSRSH~IftL~Ve~~~~e~~~~~~~~~~~SrL~fVDLAGSER~~kt~s~g~rlkEg~~INkSLl 160 (841)
.|.++|++++|.+|..|||||+||+|+|++..... ........++|+|||||||||+.++++.|.+++|+.+||+||+
T Consensus 209 ~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~~--~~~~~~~~skl~lVDLAGSEr~~~t~~~g~rl~E~~~INkSL~ 286 (355)
T 3lre_A 209 NGNKNRTQHPTDMNATSSRSHAVFQIYLRQQDKTA--SINQNVRIAKMSLIDLAGSERASTSGAKGTRFVEGTNINRSLL 286 (355)
T ss_dssp HHHHTSCBC-----CBCTTCEEEEEEEEEEEETTS--CTTCCCCCEEEEEEECCCCCC-----------------CHHHH
T ss_pred HHHhcCCcccccCcCCCCCCcEEEEEEEEEecCCC--CCCCCEEEEEEEEEECCCCCcCcCCCCccHHHHHHHHHHHHHH
Confidence 99999999999999999999999999998864321 2223456799999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcC--CCCcccCCChhhhhccccccCCCccceEEeecCCCCCCHHHHHHHHHHHHHhccc
Q 003184 161 TLSTVIRKLSKG--RNGHINYRDSKLTRMLQPCLGGNARTAIICTLSPARSHVEQTRNTLLFACCAKEV 227 (841)
Q Consensus 161 aLg~VI~aLs~g--k~~hIPYRDSKLTrLLqdSLGGNsrT~mIa~ISPa~~~~eETLsTLrFAsrAK~I 227 (841)
+||+||.+|+++ +..|||||||||||||||+|||||+|+|||||||+..+++||++||+||+|||+|
T Consensus 287 aLg~vI~aL~~~~~~~~hiPyRdSkLT~lL~dsLgGnskt~mIa~isP~~~~~~ETl~TL~fA~rak~I 355 (355)
T 3lre_A 287 ALGNVINALADSKRKNQHIPYRNSKLTRLLKDSLGGNCQTIMIAAVSPSSVFYDDTYNTLKYANRAKDI 355 (355)
T ss_dssp HHHHHHHHHC--------CCGGGSHHHHHTTTTSSTTSEEEEEEEECCBGGGHHHHHHHHHHHHHTC--
T ss_pred HHHHHHHHHHhccCCCCcCCcccCHHHHHHHHhcCCCceEEEEEEeCCchhhHHHHHHHHHHHHHhccC
Confidence 999999999875 3469999999999999999999999999999999999999999999999999987
No 16
>2h58_A Kinesin-like protein KIFC3 variant; motor domain, ADP, structural genomics, structur Al genomics consortium, SGC; HET: ADP; 1.85A {Homo sapiens}
Probab=100.00 E-value=1.6e-56 Score=486.86 Aligned_cols=221 Identities=32% Similarity=0.505 Sum_probs=196.6
Q ss_pred CCcHHHHHHHHHHHHHhcC-CCeEEEEEEEEEEEcCceeecCCCCCC---CceeeeCCCCCeEecccEEEEecCHHHHHH
Q 003184 2 TGITECTVADIFDYIHRHE-ERAFVLKFSAMEIYNEAIRDLLSTDNT---PLRLLDDPEKGVVVEKVTEEILKDWNHLKE 77 (841)
Q Consensus 2 ~GIIprav~dLF~~Ie~~~-e~efsV~vSylEIYNE~V~DLLs~~~~---~L~I~ed~~~gv~V~gLtev~V~S~eel~~ 77 (841)
+|||||++++||+.|++.. +..|.|+|||+|||||+|+|||++... .+++.+|+.++++|.||+++.|.+++|++.
T Consensus 105 ~Giipr~~~~lF~~i~~~~~~~~~~v~vS~~EIYnE~i~DLL~~~~~~~l~i~~~~~~~~~~~v~gl~~~~v~s~~e~~~ 184 (330)
T 2h58_A 105 PGINQRALQLLFSEVQEKASDWEYTITVSAAEIYNEVLRDLLGKEPQEKLEIRLCPDGSGQLYVPGLTEFQVQSVDDINK 184 (330)
T ss_dssp BCHHHHHHHHHHHHHHTSCTTEEEEEEEEEEEEETTEEEETTSCSSCCCCCCEECTTSSCCEECTTCCCEEECSHHHHHH
T ss_pred CcHHHHHHHHHHHhhhcccCCceEEEEEEEEEEECCChhhcccccccccceEEEeecCCCCEecCCCEEEEeCCHHHHHH
Confidence 6999999999999998654 579999999999999999999986542 456667889999999999999999999999
Q ss_pred HHHHHHhhcccccccccCCCCCceeEEEEEEeeccccccCCCCcceeEeeeeEeecCCCcccccccchhhhhhhhccccc
Q 003184 78 LLSICEAQRRIGETLLNEKSSRSHQIIRLMIESSAREFLGKENSTTLSASVNFVDLAGSERASQALSTGARLKEGCHINR 157 (841)
Q Consensus 78 LL~~G~~~R~~~sT~lN~~SSRSH~IftL~Ve~~~~e~~~~~~~~~~~SrL~fVDLAGSER~~kt~s~g~rlkEg~~INk 157 (841)
+|..|.++|++++|.+|..|||||+||+|+|++... .......++|+|||||||||..++++.|.+++|+.+||+
T Consensus 185 ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~-----~~~~~~~skL~lVDLAGSEr~~~t~~~g~r~~E~~~IN~ 259 (330)
T 2h58_A 185 VFEFGHTNRTTEFTNLNEHSSRSHALLIVTVRGVDC-----STGLRTTGKLNLVDLAGSERVGKSGAEGSRLREAQHINK 259 (330)
T ss_dssp HHHHHHHHTTCTTCCSCSCGGGSEEEEEEEEEEEET-----TTTEEEEEEEEEEECCCCCCCC------HHHHHHHHHHH
T ss_pred HHHHHHhhCCcccccCCCCcCCccEEEEEEEEEEec-----CCCcEEEEEEEEEeCCCCCcccccCCchhhhHHHHHhhH
Confidence 999999999999999999999999999999987532 234567899999999999999999999999999999999
Q ss_pred chHHHHHHHHHhhcCCCCcccCCChhhhhccccccCCCccceEEeecCCCCCCHHHHHHHHHHHHHhcccc
Q 003184 158 SLLTLSTVIRKLSKGRNGHINYRDSKLTRMLQPCLGGNARTAIICTLSPARSHVEQTRNTLLFACCAKEVT 228 (841)
Q Consensus 158 SLlaLg~VI~aLs~gk~~hIPYRDSKLTrLLqdSLGGNsrT~mIa~ISPa~~~~eETLsTLrFAsrAK~I~ 228 (841)
||++||+||.+|+++ ..||||||||||+||||+|||||+|+|||||||+..+++||++||+||+|||+|+
T Consensus 260 SL~aLg~vI~aL~~~-~~hvPyRdSkLT~lL~dsLgGns~t~mI~~isP~~~~~~ETl~TL~fA~rak~i~ 329 (330)
T 2h58_A 260 SLSALGDVIAALRSR-QGHVPFRNSKLTYLLQDSLSGDSKTLMVVQVSPVEKNTSETLYSLKFAERVRSVE 329 (330)
T ss_dssp HHHHHHHHHHHHHTT-CSCCCGGGSHHHHHTHHHHSTTCEEEEEEEECCBGGGHHHHHHHHHHHHHHC---
T ss_pred hHHHHHHHHHHHhcC-CCCCcccccHHHHHHHHHhCCCceEEEEEEeCCccccHHHHHHHHHHHHHHhhCc
Confidence 999999999999875 4599999999999999999999999999999999999999999999999999986
No 17
>3nwn_A Kinesin-like protein KIF9; motor domain, ADP, structural genomics, structural consortium, SGC, contractIle protein; HET: ADP; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.4e-56 Score=492.15 Aligned_cols=222 Identities=33% Similarity=0.499 Sum_probs=184.3
Q ss_pred CCcHHHHHHHHHHHHHhcCCCeEEEEEEEEEEEcCceeecCCCC------CCCceeeeCCCCCeEecccEEEEecCHHHH
Q 003184 2 TGITECTVADIFDYIHRHEERAFVLKFSAMEIYNEAIRDLLSTD------NTPLRLLDDPEKGVVVEKVTEEILKDWNHL 75 (841)
Q Consensus 2 ~GIIprav~dLF~~Ie~~~e~efsV~vSylEIYNE~V~DLLs~~------~~~L~I~ed~~~gv~V~gLtev~V~S~eel 75 (841)
+|||||++++||+.++..++..|.|+|||+|||||+|+|||++. ...+.+.+++ .|++|.|++++.|.+++|+
T Consensus 132 ~Giipra~~~lF~~~~~~~~~~~~v~vS~~EIYnE~i~DLL~~~~~~~~~~~~~~~~~~~-~g~~v~~l~~~~v~s~~e~ 210 (359)
T 3nwn_A 132 RGILPRALQQVFRMIEERPTHAITVRVSYLEIYNESLFDLLSTLPYVGPSVTPMTIVENP-QGVFIKGLSVHLTSQEEDA 210 (359)
T ss_dssp BCHHHHHHHHHHHHHHTCTTSCEEEEEEEEEEETTEEEETTSSSTTSCTTTSCCEEEEET-TEEEEETCCCEECSSHHHH
T ss_pred hhhHHHHHHHHHHHhhcCCCCcEEEEEEEEEEeccccccccccccccccccccceEEecC-CceEEeccEEEEecCHHHH
Confidence 69999999999999999889999999999999999999999853 2357788876 5799999999999999999
Q ss_pred HHHHHHHHhhcccccccccCCCCCceeEEEEEEeeccccccCCCCcceeEeeeeEeecCCCcccccccchhhhhhhhccc
Q 003184 76 KELLSICEAQRRIGETLLNEKSSRSHQIIRLMIESSAREFLGKENSTTLSASVNFVDLAGSERASQALSTGARLKEGCHI 155 (841)
Q Consensus 76 ~~LL~~G~~~R~~~sT~lN~~SSRSH~IftL~Ve~~~~e~~~~~~~~~~~SrL~fVDLAGSER~~kt~s~g~rlkEg~~I 155 (841)
+.+|..|.++|++++|.+|..|||||+||+|+|++.... ........|+|+|||||||||..++++.|.+++|+.+|
T Consensus 211 ~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~i~~~~~~---~~~~~~~~skL~lVDLAGSEr~~~t~~~g~rl~E~~~I 287 (359)
T 3nwn_A 211 FSLLFEGETNRIIASHTMNKNSSRSHCIFTIYLEAHSRT---LSEEKYITSKINLVDLAGSERLGKSGSEGQVLKEATYI 287 (359)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCGGGCEEEEEEEEEEC----------CCEEEEEEEEECCCCC----------------CC
T ss_pred HHHHHhhhhhcccccccCccccCcceEEEEEEEEeeccc---ccCcccccccceeeeccccccccccCCchhHHHhhhhh
Confidence 999999999999999999999999999999999876432 22334578999999999999999999999999999999
Q ss_pred ccchHHHHHHHHHhhcCCCCcccCCChhhhhccccccCCCccceEEeecCCCCCCHHHHHHHHHHHHHhccc
Q 003184 156 NRSLLTLSTVIRKLSKGRNGHINYRDSKLTRMLQPCLGGNARTAIICTLSPARSHVEQTRNTLLFACCAKEV 227 (841)
Q Consensus 156 NkSLlaLg~VI~aLs~gk~~hIPYRDSKLTrLLqdSLGGNsrT~mIa~ISPa~~~~eETLsTLrFAsrAK~I 227 (841)
|+||++||+||.+|++++..|||||||||||||||+|||||+|+|||||||+..+++||++||+||+|||+|
T Consensus 288 N~SL~~Lg~vI~aL~~~~~~hVPYRdSkLT~lLqdsLgGnskt~mI~~isP~~~~~~ETlsTL~fA~rak~I 359 (359)
T 3nwn_A 288 NKSLSFLEQAIIALGDQKRDHIPFRQCKLTHALKDSLGGNCNMVLVTNIYGEAAQLEETLSSLRFASRMKLV 359 (359)
T ss_dssp STHHHHHHHHHHHHHC-----CCGGGSHHHHHTHHHHSSSSEEEEEEEECCSGGGHHHHHHHHHHHTTGGGC
T ss_pred cccHHHHHHHHHHHHhcCCCcCCcccCHHHHHHHHhcCCCccEEEEEEeCCchhhHHHHHHHHHHHHHHcCC
Confidence 999999999999999877789999999999999999999999999999999999999999999999999987
No 18
>3gbj_A KIF13B protein; kinesin, motor domain, ADP, structural genomics, structural genomics consortium, SGC, ATP-binding, microtubule, motor protein; HET: ADP; 2.10A {Homo sapiens} SCOP: c.37.1.9
Probab=100.00 E-value=1.4e-56 Score=491.44 Aligned_cols=225 Identities=35% Similarity=0.556 Sum_probs=180.6
Q ss_pred CCcHHHHHHHHHHHHHhc--CCCeEEEEEEEEEEEcCceeecCCCCC--CCceeeeCCCCCeEecccEEEEecCHHHHHH
Q 003184 2 TGITECTVADIFDYIHRH--EERAFVLKFSAMEIYNEAIRDLLSTDN--TPLRLLDDPEKGVVVEKVTEEILKDWNHLKE 77 (841)
Q Consensus 2 ~GIIprav~dLF~~Ie~~--~e~efsV~vSylEIYNE~V~DLLs~~~--~~L~I~ed~~~gv~V~gLtev~V~S~eel~~ 77 (841)
+|||||++++||+.+... .+..|.|+|||+|||||+|+|||++.+ .++++++++.+|++|.||+++.|.+++|++.
T Consensus 117 ~Giipr~~~~lF~~i~~~~~~~~~~~v~vS~~EIYnE~i~DLL~~~~~~~~l~i~e~~~~g~~v~gl~~~~v~s~~e~~~ 196 (354)
T 3gbj_A 117 PGLIPRLCSGLFERTQKEENEEQSFKVEVSYMEIYNEKVRDLLDPKGSRQTLKVREHSVLGPYVDGLSKLAVTSYKDIES 196 (354)
T ss_dssp BCHHHHHHHHHHHHHHHHCBTTEEEEEEEEEEEEETTEEEETTC------CBCBC------CCBTTCCCEEECSHHHHHH
T ss_pred CchhhHHHHHHHHHHHhhcccccceeeeceeEEEecCeeeEccCCCCCCcceEEEEcCCCCEEEEeeEEEecCCHHHHHH
Confidence 799999999999999753 467899999999999999999998764 5899999999999999999999999999999
Q ss_pred HHHHHHhhcccccccccCCCCCceeEEEEEEeeccccccCCCCcceeEeeeeEeecCCCcccccccchhhhhhhhccccc
Q 003184 78 LLSICEAQRRIGETLLNEKSSRSHQIIRLMIESSAREFLGKENSTTLSASVNFVDLAGSERASQALSTGARLKEGCHINR 157 (841)
Q Consensus 78 LL~~G~~~R~~~sT~lN~~SSRSH~IftL~Ve~~~~e~~~~~~~~~~~SrL~fVDLAGSER~~kt~s~g~rlkEg~~INk 157 (841)
+|..|.++|++++|.+|..|||||+||+|+|++...+. .........++|+|||||||||+.++++.|.|++|+.+||+
T Consensus 197 ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~~-~~~~~~~~~skL~lVDLAGSEr~~~t~~~g~rl~E~~~IN~ 275 (354)
T 3gbj_A 197 LMSEGNKSRTVAATNMNEESSRSHAVFKITLTHTLYDV-KSGTSGEKVGKLSLVDLAGSERATKTGAAGDRLKEGSNINK 275 (354)
T ss_dssp HHHHHHHCC----------CTTSEEEEEEEEEEEEECT-TSCEEEEEEEEEEEEECCCCCCCCCCC------CHHHHHHH
T ss_pred HHHHHHhcCCeeecCCCCCCCcccEEEEEEEEEEeccc-CCCCCCeeEEEEEEEECCCCCchhhcCCccccchhHHHhhH
Confidence 99999999999999999999999999999998753321 12233457899999999999999999999999999999999
Q ss_pred chHHHHHHHHHhhc-----CCCCcccCCChhhhhccccccCCCccceEEeecCCCCCCHHHHHHHHHHHHHhccc
Q 003184 158 SLLTLSTVIRKLSK-----GRNGHINYRDSKLTRMLQPCLGGNARTAIICTLSPARSHVEQTRNTLLFACCAKEV 227 (841)
Q Consensus 158 SLlaLg~VI~aLs~-----gk~~hIPYRDSKLTrLLqdSLGGNsrT~mIa~ISPa~~~~eETLsTLrFAsrAK~I 227 (841)
||++||+||.+|++ ++..|||||||||||||||+|||||+|+|||||||+..+++||++||+||.+|+.-
T Consensus 276 SL~aLg~vI~aL~~~~~~~~~~~hvPyRdSkLT~lLqdsLgGnskt~mIa~vsP~~~~~~ETlsTLr~a~~~~~~ 350 (354)
T 3gbj_A 276 SLTTLGLVISALADQSAGKNKNKFVPYRDSVLTWLLKDSLGGNSKTAMVATVSPAADNYDETLSTLRYADRAKHH 350 (354)
T ss_dssp HHHHHHHHHHHHHHC------CCCCCGGGSHHHHHTHHHHSTTCEEEEEEEECCBGGGHHHHHHHHHHHHHHC--
T ss_pred HHHHHHHHHHHHHhhhcccCCCCcccccccHHHHHHHHHhCCCCeEEEEEEeCCCcchHHHHHHHHHHHHHhhhc
Confidence 99999999999985 34569999999999999999999999999999999999999999999999999863
No 19
>1f9v_A Kinesin-like protein KAR3; kinesin-related protein, motor protein, microtubinding proteinbule, contractIle protein; HET: ADP; 1.30A {Saccharomyces cerevisiae} SCOP: c.37.1.9 PDB: 1f9t_A* 1f9w_A* 1f9u_A* 3kar_A*
Probab=100.00 E-value=2.1e-56 Score=489.00 Aligned_cols=226 Identities=33% Similarity=0.482 Sum_probs=192.0
Q ss_pred CCcHHHHHHHHHHHHHhcC--CCeEEEEEEEEEEEcCceeecCCCCCC---------CceeeeC-CCCCeEecccEEEEe
Q 003184 2 TGITECTVADIFDYIHRHE--ERAFVLKFSAMEIYNEAIRDLLSTDNT---------PLRLLDD-PEKGVVVEKVTEEIL 69 (841)
Q Consensus 2 ~GIIprav~dLF~~Ie~~~--e~efsV~vSylEIYNE~V~DLLs~~~~---------~L~I~ed-~~~gv~V~gLtev~V 69 (841)
+|||||++++||+.|+... +..|.|+|||+|||||+|+|||++... .+.++++ +.++++|.|++++.|
T Consensus 107 ~Giipr~~~~lF~~i~~~~~~~~~~~v~vS~~EIYnE~i~DLL~~~~~~~~~~~~~~~~~i~~~~~~~~~~v~~l~~~~v 186 (347)
T 1f9v_A 107 DGIIPSTISHIFNWINKLKTKGWDYKVNCEFIEIYNENIVDLLRSDNNNKEDTSIGLKHEIRHDQETKTTTITNVTSCKL 186 (347)
T ss_dssp TSHHHHHHHHHHHHHHHHGGGTCEEEEEEEEEEEETTEEEETTC-------------CCCEEEETTTTEEEETTCCCEEC
T ss_pred CCchHHHHHHHHHHHHhhhhcCCceEEEEEEEEEECCeeeeccCCccccccccccCCceeEEEecCCCceEecCCEEEEc
Confidence 6999999999999998643 579999999999999999999987643 4667765 457899999999999
Q ss_pred cCHHHHHHHHHHHHhhcccccccccCCCCCceeEEEEEEeeccccccCCCCcceeEeeeeEeecCCCcccccccchhhhh
Q 003184 70 KDWNHLKELLSICEAQRRIGETLLNEKSSRSHQIIRLMIESSAREFLGKENSTTLSASVNFVDLAGSERASQALSTGARL 149 (841)
Q Consensus 70 ~S~eel~~LL~~G~~~R~~~sT~lN~~SSRSH~IftL~Ve~~~~e~~~~~~~~~~~SrL~fVDLAGSER~~kt~s~g~rl 149 (841)
.++++++.+|..|.++|++++|.+|..|||||+||+|+|++... .......++|+|||||||||+.++++.|.|+
T Consensus 187 ~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~-----~~~~~~~skL~lVDLAGSEr~~~t~~~g~rl 261 (347)
T 1f9v_A 187 ESEEMVEIILKKANKLRSTASTASNEHSSASHSIFIIHLSGSNA-----KTGAHSYGTLNLVDLAGSERINVSQVVGDRL 261 (347)
T ss_dssp SSGGGHHHHHHHHC-----------CCGGGSEEEEEEEEEEECC-------CCEEEEEEEEEECCCCCCCCGGGCCHHHH
T ss_pred CCHHHHHHHHHHHHhccceeeccCCCCCCCceEEEEEEEEEecC-----CCCceeeeEEEEEECCCCccccccccchhhh
Confidence 99999999999999999999999999999999999999987532 2234578999999999999999999999999
Q ss_pred hhhcccccchHHHHHHHHHhhcCC--CCcccCCChhhhhccccccCCCccceEEeecCCCCCCHHHHHHHHHHHHHhccc
Q 003184 150 KEGCHINRSLLTLSTVIRKLSKGR--NGHINYRDSKLTRMLQPCLGGNARTAIICTLSPARSHVEQTRNTLLFACCAKEV 227 (841)
Q Consensus 150 kEg~~INkSLlaLg~VI~aLs~gk--~~hIPYRDSKLTrLLqdSLGGNsrT~mIa~ISPa~~~~eETLsTLrFAsrAK~I 227 (841)
+|+.+||+||++||+||.+|++++ ..|||||||||||||||+|||||+|+|||||||+..+++||++||+||+||++|
T Consensus 262 ~E~~~IN~SL~aLg~vI~aL~~~~~~~~hiPyRdSkLT~lLqdsLgGnskt~mI~~vsP~~~~~~ETl~TLrfA~r~~~i 341 (347)
T 1f9v_A 262 RETQNINKSLSCLGDVIHALGQPDSTKRHIPFRNSKLTYLLQYSLTGDSKTLMFVNISPSSSHINETLNSLRFASKVNST 341 (347)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTSCC---CCCCGGGSHHHHHHHHHHSTTCEEEEEEEECCSGGGHHHHHHHHHHHHHHCCT
T ss_pred HHHHHHhHHHHHHHHHHHHHhcccCCCCcCccccCHHHHHHHHHhCCCccEEEEEEeCCccccHHHHHHHHHHHHHHhhh
Confidence 999999999999999999998764 469999999999999999999999999999999999999999999999999999
Q ss_pred cccee
Q 003184 228 TTKAQ 232 (841)
Q Consensus 228 ~n~p~ 232 (841)
+..++
T Consensus 342 ~~~~r 346 (347)
T 1f9v_A 342 RLVSR 346 (347)
T ss_dssp TTC--
T ss_pred ccCCC
Confidence 98764
No 20
>2rep_A Kinesin-like protein KIFC1; structural genomics consortium, motor domain, ADP, binding, cell cycle, cell division, endosome, microtubule; HET: ADP; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.2e-55 Score=487.32 Aligned_cols=220 Identities=32% Similarity=0.468 Sum_probs=175.6
Q ss_pred CCcHHHHHHHHHHHHHhcC--CCeEEEEEEEEEEEcCceeecCCCC-----CCCceeeeC--CCCCeEecccEEEEecCH
Q 003184 2 TGITECTVADIFDYIHRHE--ERAFVLKFSAMEIYNEAIRDLLSTD-----NTPLRLLDD--PEKGVVVEKVTEEILKDW 72 (841)
Q Consensus 2 ~GIIprav~dLF~~Ie~~~--e~efsV~vSylEIYNE~V~DLLs~~-----~~~L~I~ed--~~~gv~V~gLtev~V~S~ 72 (841)
+|||||++++||+.++... +..|.|+|||+|||||+|+|||++. ...+.++++ +.++++|.|++++.|.++
T Consensus 144 ~Giipr~~~~lF~~i~~~~~~~~~~~v~vS~~EIYnE~i~DLL~~~~~~~~~~~l~ir~~~~~~~~~~v~gl~~~~V~s~ 223 (376)
T 2rep_A 144 EGLIPRALRHLFSVAQELSGQGWTYSFVASYVEIYNETVRDLLATGTRKGQGGECEIRRAGPGSEELTVTNARYVPVSCE 223 (376)
T ss_dssp BCHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEEEETTEEEETTCCC--------CCEEEC---CCCEEETTCCCEEECSH
T ss_pred CCcHHHHHHHHHHHHHHhhcCCeEEEEEEEEEEEECCEeeEccccccccccCCCceEEeccCCCCCEEECCcEEEEeCCH
Confidence 6999999999999998643 5699999999999999999999875 236888888 678999999999999999
Q ss_pred HHHHHHHHHHHhhcccccccccCCCCCceeEEEEEEeeccccccCCCCcceeEeeeeEeecCCCcccccccchh----hh
Q 003184 73 NHLKELLSICEAQRRIGETLLNEKSSRSHQIIRLMIESSAREFLGKENSTTLSASVNFVDLAGSERASQALSTG----AR 148 (841)
Q Consensus 73 eel~~LL~~G~~~R~~~sT~lN~~SSRSH~IftL~Ve~~~~e~~~~~~~~~~~SrL~fVDLAGSER~~kt~s~g----~r 148 (841)
+|++.+|..|.++|++++|.||..|||||+||+|+|++... .......++|+|||||||||..++++.| .|
T Consensus 224 ~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~Ifti~v~~~~~-----~~~~~~~skL~lVDLAGSEr~~~t~~~g~~~~~r 298 (376)
T 2rep_A 224 KEVDALLHLARQNRAVARTAQNERSSRSHSVFQLQISGEHS-----SRGLQCGAPLSLVDLAGSERLDPGLALGPGERER 298 (376)
T ss_dssp HHHHHHHHHHHHHHHHCC-----CGGGSEEEEEEEEEEEES-----SSCCEEEEEEEEEECCCCC---------------
T ss_pred HHHHHHHHHHHhhcccccccCCCCCCCceEEEEEEEEEEec-----CCCcEEEeEEEEEECCCCcccccccccCccccch
Confidence 99999999999999999999999999999999999987532 2234568999999999999999999999 99
Q ss_pred hhhhcccccchHHHHHHHHHhhcCCCCcccCCChhhhhccccccCCCccceEEeecCCCCCCHHHHHHHHHHHHHhccc
Q 003184 149 LKEGCHINRSLLTLSTVIRKLSKGRNGHINYRDSKLTRMLQPCLGGNARTAIICTLSPARSHVEQTRNTLLFACCAKEV 227 (841)
Q Consensus 149 lkEg~~INkSLlaLg~VI~aLs~gk~~hIPYRDSKLTrLLqdSLGGNsrT~mIa~ISPa~~~~eETLsTLrFAsrAK~I 227 (841)
++|+.+||+||++||+||.+|+++ ..|||||||||||||||+|||||+|+|||||||+..+++||++||+||+|++++
T Consensus 299 lkE~~~INkSL~aLg~vI~aL~~~-~~hVPYRdSkLT~LLqdsLgGnskT~mIa~isP~~~~~~ETlsTLrfA~Rv~~~ 376 (376)
T 2rep_A 299 LRETQAINSSLSTLGLVIMALSNK-ESHVPYRNSKLTYLLQNSLGGSAKMLMFVNISPLEENVSESLNSLRFASKVNQC 376 (376)
T ss_dssp ---------CHHHHHHHHHHHHTT-CSCCCGGGSHHHHHTGGGTSTTCEEEEEEEECCCGGGHHHHHHHHHHHHHHC--
T ss_pred hhHHhHhhHHHHHHHHHHHHHhcC-CCccCCcCCHHHHHHHHhhCCCCeEEEEEEeCCchhhHHHHHHHHHHHHHHhcC
Confidence 999999999999999999999975 469999999999999999999999999999999999999999999999999874
No 21
>1ry6_A Internal kinesin; kinesin motor domain, nucleotide-free, transport protein; 1.60A {Plasmodium falciparum} SCOP: c.37.1.9
Probab=100.00 E-value=9.2e-56 Score=485.79 Aligned_cols=225 Identities=30% Similarity=0.423 Sum_probs=191.5
Q ss_pred CCcHHHHHHHHHHHHHhc-CCCeEEEEEEEEEEEcCceeecCCCCCCCceeeeCCCCCeEecccEEEEecCHHHHHHHHH
Q 003184 2 TGITECTVADIFDYIHRH-EERAFVLKFSAMEIYNEAIRDLLSTDNTPLRLLDDPEKGVVVEKVTEEILKDWNHLKELLS 80 (841)
Q Consensus 2 ~GIIprav~dLF~~Ie~~-~e~efsV~vSylEIYNE~V~DLLs~~~~~L~I~ed~~~gv~V~gLtev~V~S~eel~~LL~ 80 (841)
+|||||++++||..++.. .+..|.|+|||+|||||+|+|||++. ..+.+++++.++++|+||+++.|.+++|++.+|.
T Consensus 114 ~Giipr~~~~lF~~i~~~~~~~~~~v~vS~~EIYnE~v~DLL~~~-~~~~~~e~~~~~~~v~gl~~~~V~s~~e~~~~l~ 192 (360)
T 1ry6_A 114 PGIFQYAAGDIFTFLNIYDKDNTKGIFISFYEIYCGKLYDLLQKR-KMVAALENGKKEVVVKDLKILRVLTKEELILKMI 192 (360)
T ss_dssp BCHHHHHHHHHHHHHHHHCSSSCEEEEEEEEEEETTEEEESCCC------------CCBCGGGSCCEEECSHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHHHhhccCCceEEEEEEEEeeCCeeEEcccCC-ccceeeEcCCCCEEEcCcEEEEeCCHHHHHHHHH
Confidence 799999999999999864 46789999999999999999999865 4578889999999999999999999999999999
Q ss_pred HHHhhcccccccccCCCCCceeEEEEEEeeccccccCCCCcceeEeeeeEeecCCCcccccccchh-hhhhhhcccccch
Q 003184 81 ICEAQRRIGETLLNEKSSRSHQIIRLMIESSAREFLGKENSTTLSASVNFVDLAGSERASQALSTG-ARLKEGCHINRSL 159 (841)
Q Consensus 81 ~G~~~R~~~sT~lN~~SSRSH~IftL~Ve~~~~e~~~~~~~~~~~SrL~fVDLAGSER~~kt~s~g-~rlkEg~~INkSL 159 (841)
.|.++|++++|.+|..|||||+||+|+|++.. .....++|+|||||||||..++++.| .+++|+.+||+||
T Consensus 193 ~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~--------~~~~~skL~lVDLAGSEr~~~t~~~~~~~~~E~~~INkSL 264 (360)
T 1ry6_A 193 DGVLLRKIGVNSQNDESSRSHAILNIDLKDIN--------KNTSLGKIAFIDLAGSERGADTVSQNKQTQTDGANINRSL 264 (360)
T ss_dssp HHHHHHHHCTTCCTTGGGGSEEEEEEEEEETT--------TTEEEEEEEEEECCCTTGGGGGGCSSHHHHHHHHHHHHHH
T ss_pred HHhhhhhcccccccCCCccceEEEEEEEEecc--------CCcceeEEEEEECCCCccccccccccccchHHHHHHHHHH
Confidence 99999999999999999999999999998642 12467999999999999999988765 5789999999999
Q ss_pred HHHHHHHHHhhcCCCCcccCCChhhhhccccccCCCccceEEeecCCCCCCHHHHHHHHHHHHHhcccccceeeccc
Q 003184 160 LTLSTVIRKLSKGRNGHINYRDSKLTRMLQPCLGGNARTAIICTLSPARSHVEQTRNTLLFACCAKEVTTKAQVNVV 236 (841)
Q Consensus 160 laLg~VI~aLs~gk~~hIPYRDSKLTrLLqdSLGGNsrT~mIa~ISPa~~~~eETLsTLrFAsrAK~I~n~p~vN~~ 236 (841)
++||+||.+|+.+ ..|||||||||||||||+|||||+|+|||||||+..+++||++||+||+|||+|+|.|..|..
T Consensus 265 ~aLg~vI~aL~~~-~~hvPyRdSkLT~lLqdsLgGnskt~mIa~isP~~~~~~ETlsTLrfA~rak~i~n~~~~~~~ 340 (360)
T 1ry6_A 265 LALKECIRAMDSD-KNHIPFRDSELTKVLRDIFVGKSKSIMIANISPTISCCEQTLNTLRYSSRVKNKGNSKLEGKP 340 (360)
T ss_dssp HHHHHHHHHHTTS-TTSCCGGGCHHHHHTGGGGSSSCEEEEEEEECCBGGGHHHHHHHHHHHHHHCC----------
T ss_pred HHHHHHHHHHhcC-CCCCccccCHHHHHHHHHhCCCCeEEEEEEeCCCcccHHHHHHHHHHHHHHhhcccCcccCCC
Confidence 9999999999875 459999999999999999999999999999999999999999999999999999997766544
No 22
>3t0q_A AGR253WP; kinesin, alpha and beta proteins, P-loop containing nucleosi triphosphate hydrolases, microtubule motor protein; HET: ADP; 2.35A {Ashbya gossypii}
Probab=100.00 E-value=8.3e-56 Score=484.56 Aligned_cols=225 Identities=31% Similarity=0.440 Sum_probs=184.1
Q ss_pred CCcHHHHHHHHHHHHHhcC--CCeEEEEEEEEEEEcCceeecCCCCC-----------CCceeeeCC-CCCeEecccEEE
Q 003184 2 TGITECTVADIFDYIHRHE--ERAFVLKFSAMEIYNEAIRDLLSTDN-----------TPLRLLDDP-EKGVVVEKVTEE 67 (841)
Q Consensus 2 ~GIIprav~dLF~~Ie~~~--e~efsV~vSylEIYNE~V~DLLs~~~-----------~~L~I~ed~-~~gv~V~gLtev 67 (841)
+|||||++++||+.++..+ +..|.|+|||+|||||+|+|||.+.. ..+.+++++ .+|++|.||+++
T Consensus 108 ~Giipr~~~~lF~~~~~~~~~~~~~~v~vS~~EIYnE~i~DLL~~~~~~~~~~~~~~~~~~~i~~~~~~~g~~v~~l~~~ 187 (349)
T 3t0q_A 108 DGMIPMTLSHIFKWTANLKERGWNYEMECEYIEIYNETILDLLRDFKSHDNIDEILDSQKHDIRHDHEKQGTYITNVTRM 187 (349)
T ss_dssp TSHHHHHHHHHHHHHHHHGGGTEEEEEEEEEEEEETTEEEETTC---------------CCCEEEETTTTEEEETTCCCE
T ss_pred CchhhHHHHHHHHHHHHhhhcCceeEEEEEEEEEEcchhhccccccccccccccccccccceeEEecCCCCEEEeCCEEE
Confidence 6999999999999998644 56899999999999999999998643 457777765 457999999999
Q ss_pred EecCHHHHHHHHHHHHhhcccccccccCCCCCceeEEEEEEeeccccccCCCCcceeEeeeeEeecCCCcccccccchhh
Q 003184 68 ILKDWNHLKELLSICEAQRRIGETLLNEKSSRSHQIIRLMIESSAREFLGKENSTTLSASVNFVDLAGSERASQALSTGA 147 (841)
Q Consensus 68 ~V~S~eel~~LL~~G~~~R~~~sT~lN~~SSRSH~IftL~Ve~~~~e~~~~~~~~~~~SrL~fVDLAGSER~~kt~s~g~ 147 (841)
.|.+++|++.+|..|.++|++++|.+|..|||||+||+|+|++... .......++|+|||||||||+.++++.|.
T Consensus 188 ~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~-----~~~~~~~~kL~lVDLAGSEr~~~t~~~g~ 262 (349)
T 3t0q_A 188 KMTSTSQVDTILKKASKMRSTAATRSNERSSRSHSVFMVHINGRNL-----HTGETSQGKLNLVDLAGSERINSSAVTGE 262 (349)
T ss_dssp ECCCHHHHHHHHHHC------------CTGGGSEEEEEEEEEEEET-----TTCCEEEEEEEEEECCCCCCCC----CCH
T ss_pred EeCCHHHHHHHHHHHHHhCcccccccccccCCcceEEEEEEEEEec-----CCCCeeEEEEEEEeCCCCCccccccCccc
Confidence 9999999999999999999999999999999999999999987532 22345789999999999999999999999
Q ss_pred hhhhhcccccchHHHHHHHHHhhcCCC--CcccCCChhhhhccccccCCCccceEEeecCCCCCCHHHHHHHHHHHHHhc
Q 003184 148 RLKEGCHINRSLLTLSTVIRKLSKGRN--GHINYRDSKLTRMLQPCLGGNARTAIICTLSPARSHVEQTRNTLLFACCAK 225 (841)
Q Consensus 148 rlkEg~~INkSLlaLg~VI~aLs~gk~--~hIPYRDSKLTrLLqdSLGGNsrT~mIa~ISPa~~~~eETLsTLrFAsrAK 225 (841)
|++|+.+||+||++||+||.+|+++.. .|||||||||||||||+|||||+|+|||||||+..+++||++||+||+|++
T Consensus 263 rl~E~~~INkSL~aLg~vI~aL~~~~~~~~hiPyRdSkLT~lLqdsLgGnskt~mi~~vsP~~~~~~ETl~TL~fA~rv~ 342 (349)
T 3t0q_A 263 RLRETQNINKSLSCLGDVIYALNTPDAGKRYIPFRNSKLTYLLQYSLVGDSKTLMFVNIPPDPNHISETLNSLRFASKVN 342 (349)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHSTTGGGSCCCGGGSHHHHHHGGGSSTTCEEEEEEEECCCGGGHHHHHHHHHHHHHHH
T ss_pred cchhHHhhhHhHHHHHHHHHHHhcccCCCCcCCCcCCHHHHHHHHhcCCCceEEEEEEeCCchhhHHHHHHHHHHHHHhh
Confidence 999999999999999999999986533 599999999999999999999999999999999999999999999999999
Q ss_pred ccccce
Q 003184 226 EVTTKA 231 (841)
Q Consensus 226 ~I~n~p 231 (841)
.|+..+
T Consensus 343 ~ik~~~ 348 (349)
T 3t0q_A 343 STKIAK 348 (349)
T ss_dssp C-----
T ss_pred hcccCC
Confidence 998654
No 23
>4etp_A Kinesin-like protein KAR3; kinesin motor protein, kinesin motor homology domain, karyog mitosis, microtubules; HET: ADP EBC; 2.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1e-54 Score=483.88 Aligned_cols=226 Identities=34% Similarity=0.488 Sum_probs=195.5
Q ss_pred CCcHHHHHHHHHHHHHhc--CCCeEEEEEEEEEEEcCceeecCCCCC---------CCceeeeCC-CCCeEecccEEEEe
Q 003184 2 TGITECTVADIFDYIHRH--EERAFVLKFSAMEIYNEAIRDLLSTDN---------TPLRLLDDP-EKGVVVEKVTEEIL 69 (841)
Q Consensus 2 ~GIIprav~dLF~~Ie~~--~e~efsV~vSylEIYNE~V~DLLs~~~---------~~L~I~ed~-~~gv~V~gLtev~V 69 (841)
+|||||++++||+.|+.. .+..|.|+|||+|||||+|+|||++.. ..+.+++++ .++++|.|++++.|
T Consensus 163 ~Giipr~~~~lF~~i~~~~~~~~~~~v~vS~~EIYnE~i~DLL~~~~~~~~~~~~~~~~~i~~~~~~~~~~v~~l~~~~v 242 (403)
T 4etp_A 163 DGIIPSTISHIFNWINKLKTKGWDYKVNAEFIEIYNENIVDLLRSDNNNKEDTSIGLKHEIRHDQETKTTTITNVTSVKL 242 (403)
T ss_dssp TSHHHHHHHHHHHHHHHHHTTTEEEEEEEEEEEEETTEEEETTCC--------CCSCCCCEEEETTTTEEEETTCCCEEC
T ss_pred CccchhHHHHHHHHHHhhhccCceEEEEEEEEEEecceeeEccCCccccccccccCcceeeEEeCCCCCEEecCcEEEEe
Confidence 699999999999999864 356999999999999999999998753 246677665 46799999999999
Q ss_pred cCHHHHHHHHHHHHhhcccccccccCCCCCceeEEEEEEeeccccccCCCCcceeEeeeeEeecCCCcccccccchhhhh
Q 003184 70 KDWNHLKELLSICEAQRRIGETLLNEKSSRSHQIIRLMIESSAREFLGKENSTTLSASVNFVDLAGSERASQALSTGARL 149 (841)
Q Consensus 70 ~S~eel~~LL~~G~~~R~~~sT~lN~~SSRSH~IftL~Ve~~~~e~~~~~~~~~~~SrL~fVDLAGSER~~kt~s~g~rl 149 (841)
.++++++.+|..|.++|++++|.+|..|||||+||+|+|.+... .......|+|+|||||||||+.++++.|.++
T Consensus 243 ~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~-----~~~~~~~~kL~lVDLAGSEr~~~t~~~g~rl 317 (403)
T 4etp_A 243 ESEEMVEIILKKANKLRSTASTASNEHSSRSHSIFIIHLSGSNA-----KTGAHSYGTLNLVDLAGSERINVSQVVGDRL 317 (403)
T ss_dssp CCHHHHHHHHHHHC--C----CHHHHHHHTSEEEEEEEEEEEET-----TTCCEEEEEEEEEECCCCCCCCCSSCCHHHH
T ss_pred CCHHHHHHHHHHHHHhcccccccCCcccCCcccEEEEEEEEeec-----CCCCeeEEEEEEEECCCCccccccCChhHHH
Confidence 99999999999999999999999999999999999999987532 2334568999999999999999999999999
Q ss_pred hhhcccccchHHHHHHHHHhhcCC--CCcccCCChhhhhccccccCCCccceEEeecCCCCCCHHHHHHHHHHHHHhccc
Q 003184 150 KEGCHINRSLLTLSTVIRKLSKGR--NGHINYRDSKLTRMLQPCLGGNARTAIICTLSPARSHVEQTRNTLLFACCAKEV 227 (841)
Q Consensus 150 kEg~~INkSLlaLg~VI~aLs~gk--~~hIPYRDSKLTrLLqdSLGGNsrT~mIa~ISPa~~~~eETLsTLrFAsrAK~I 227 (841)
+|+.+||+||++||+||.+|+++. ..||||||||||+||||+|||||+|+|||||||+..+++||++||+||+|++.|
T Consensus 318 ~E~~~INkSL~aLg~vI~aL~~~~~~~~hiPyRdSkLT~LLqdsLgGnskt~mi~~vsP~~~~~~ETl~TL~fA~rv~~~ 397 (403)
T 4etp_A 318 RETQNINKSLSALGDVIHALGQPDSTKRHIPFRNSKLTYLLQYSLTGDSKTLMFVNISPSSSHINETLNSLRFASKVNST 397 (403)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTSSCTTTSCCCGGGSHHHHHTGGGTSTTCEEEEEEEECCSGGGHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHhcccCCCCcCCcccchHHHHHHHhcCCCceEEEEEEeCCchhhHHHHHHHHHHHHHHhhc
Confidence 999999999999999999998753 359999999999999999999999999999999999999999999999999999
Q ss_pred cccee
Q 003184 228 TTKAQ 232 (841)
Q Consensus 228 ~n~p~ 232 (841)
+..++
T Consensus 398 ~~~~r 402 (403)
T 4etp_A 398 RLVSR 402 (403)
T ss_dssp -----
T ss_pred ccCCC
Confidence 88764
No 24
>2heh_A KIF2C protein; kinesin, motor domain, ADP, structural genomics, structural genomics consortium, SGC, structural protein; HET: ADP; 2.15A {Homo sapiens} PDB: 3edl_D*
Probab=100.00 E-value=9.8e-55 Score=481.00 Aligned_cols=217 Identities=32% Similarity=0.504 Sum_probs=178.7
Q ss_pred CCcHHHHHHHHHHHHHhc--CCCeEEEEEEEEEEEcCceeecCCCCCCCceeeeCCCCCeEecccEEEEecCHHHHHHHH
Q 003184 2 TGITECTVADIFDYIHRH--EERAFVLKFSAMEIYNEAIRDLLSTDNTPLRLLDDPEKGVVVEKVTEEILKDWNHLKELL 79 (841)
Q Consensus 2 ~GIIprav~dLF~~Ie~~--~e~efsV~vSylEIYNE~V~DLLs~~~~~L~I~ed~~~gv~V~gLtev~V~S~eel~~LL 79 (841)
+|||||++++||..++.. .+..|.|+|||+|||||+|+|||++. ..+++++|+.++++|.||+++.|.+++|++.+|
T Consensus 165 ~Giipr~~~~lF~~~~~~~~~~~~~~V~vS~~EIYnE~v~DLL~~~-~~l~i~ed~~~~v~v~gl~~~~V~s~~e~~~ll 243 (387)
T 2heh_A 165 KGIYAMASRDVFLLKNQPCYRKLGLEVYVTFFEIYNGKLFDLLNKK-AKLRVLEDGKQQVQVVGLQEHLVNSADDVIKMI 243 (387)
T ss_dssp CCHHHHHHHHHHHHHTSHHHHTTTCEEEEEEEEEETTEEEETTTTT-EECEEEECTTCCEEEETCCCEEESSHHHHHHHH
T ss_pred CceehhhHHHHHHHhhcccccCceEEEEEEEEEecCCeEEECCCCC-ccceEEEcCCCCEEecCCEEEEeCCHHHHHHHH
Confidence 699999999999999753 35789999999999999999999864 579999999999999999999999999999999
Q ss_pred HHHHhhcccccccccCCCCCceeEEEEEEeeccccccCCCCcceeEeeeeEeecCCCccccccc-chhhhhhhhcccccc
Q 003184 80 SICEAQRRIGETLLNEKSSRSHQIIRLMIESSAREFLGKENSTTLSASVNFVDLAGSERASQAL-STGARLKEGCHINRS 158 (841)
Q Consensus 80 ~~G~~~R~~~sT~lN~~SSRSH~IftL~Ve~~~~e~~~~~~~~~~~SrL~fVDLAGSER~~kt~-s~g~rlkEg~~INkS 158 (841)
..|.++|++++|.+|..|||||+||+|+|++. ....++|+|||||||||..+++ +.+.+++|+.+||+|
T Consensus 244 ~~G~~~R~~~~T~~N~~SSRSH~Ifti~v~~~----------~~~~skL~lVDLAGSER~~~t~~~~~~~~~E~~~INkS 313 (387)
T 2heh_A 244 DMGSACRTSGQTFANSNSSRSHACFQIILRAK----------GRMHGKFSLVDLAGNERGADTSSADRQTRMEGAEINKS 313 (387)
T ss_dssp HHHHHHC---------CGGGSEEEEEEEEESS----------SSEEEEEEEEECCCCC---------------CHHHHHH
T ss_pred HHHHhhCCcccCcCcCCcccceEEEEEEEEEC----------CeeeeEEEEEECCCCccccccccccccchhhHHHHhHH
Confidence 99999999999999999999999999999763 1367999999999999998876 466788999999999
Q ss_pred hHHHHHHHHHhhcCCCCcccCCChhhhhccccc-cCCCccceEEeecCCCCCCHHHHHHHHHHHHHhcccccc
Q 003184 159 LLTLSTVIRKLSKGRNGHINYRDSKLTRMLQPC-LGGNARTAIICTLSPARSHVEQTRNTLLFACCAKEVTTK 230 (841)
Q Consensus 159 LlaLg~VI~aLs~gk~~hIPYRDSKLTrLLqdS-LGGNsrT~mIa~ISPa~~~~eETLsTLrFAsrAK~I~n~ 230 (841)
|++||+||.+|+++ ..|||||||||||||||+ |||||+|+|||||||+..+++||++||+||+|||+|++.
T Consensus 314 L~aLg~vI~aL~~~-~~hvPYRdSKLTrlLqdsllGgnskT~mIa~isP~~~~~~ETlsTLrfA~rak~I~~~ 385 (387)
T 2heh_A 314 LLALKECIRALGQN-KAHTPFRESKLTQVLRDSFIGENSRTCMIATISPGISSCEYTLNTLRYADRVKELSPH 385 (387)
T ss_dssp HHHHHHHHHHHHTT-CSCCCGGGSHHHHHTGGGGSSTTEEEEEEEEECCBGGGHHHHHHHHHHHHHHCC----
T ss_pred HHHHHHHHHHHhcC-CCCCCccccHHHHHHhhhccCCCCeEEEEEEeCCccchHHHHHHHHHHHHHhccCcCC
Confidence 99999999999975 469999999999999999 699999999999999999999999999999999999875
No 25
>1v8k_A Kinesin-like protein KIF2C; microtubule destabilizer, structural P; HET: ANP; 2.25A {Mus musculus} SCOP: c.37.1.9 PDB: 1v8j_A* 2gry_A*
Probab=100.00 E-value=2e-54 Score=481.38 Aligned_cols=219 Identities=32% Similarity=0.490 Sum_probs=179.7
Q ss_pred CCcHHHHHHHHHHHHHhc--CCCeEEEEEEEEEEEcCceeecCCCCCCCceeeeCCCCCeEecccEEEEecCHHHHHHHH
Q 003184 2 TGITECTVADIFDYIHRH--EERAFVLKFSAMEIYNEAIRDLLSTDNTPLRLLDDPEKGVVVEKVTEEILKDWNHLKELL 79 (841)
Q Consensus 2 ~GIIprav~dLF~~Ie~~--~e~efsV~vSylEIYNE~V~DLLs~~~~~L~I~ed~~~gv~V~gLtev~V~S~eel~~LL 79 (841)
+||||+++++||..+... .+..|.|+|||+|||||+|+|||++. ..+.+++|+.++++|.||+++.|.|++|++.+|
T Consensus 185 ~Giipra~~~lF~~~~~~~~~~~~~~V~vS~lEIYnE~i~DLL~~~-~~l~i~ed~~~~v~V~gl~e~~V~s~~e~~~ll 263 (410)
T 1v8k_A 185 KGIYAMASRDVFLLKNQPRYRNLNLEVYVTFFEIYNGKVFDLLNKK-AKLRVLEDSRQQVQVVGLQEYLVTCADDVIKMI 263 (410)
T ss_dssp GSHHHHHHHHHHHHHTSHHHHTTCCEEEEEEEEEETTEEEETTTTT-EEEEEEECSSCCEEEETCCCEEESSHHHHHHHH
T ss_pred CcchhhhHHHHHHHHhhhcccCccEEEEEEEEEeeCCEEEECCCCC-CCceEEECCCCCeEecCCEEEEeCCHHHHHHHH
Confidence 699999999999999753 36789999999999999999999864 579999999999999999999999999999999
Q ss_pred HHHHhhcccccccccCCCCCceeEEEEEEeeccccccCCCCcceeEeeeeEeecCCCccccccc-chhhhhhhhcccccc
Q 003184 80 SICEAQRRIGETLLNEKSSRSHQIIRLMIESSAREFLGKENSTTLSASVNFVDLAGSERASQAL-STGARLKEGCHINRS 158 (841)
Q Consensus 80 ~~G~~~R~~~sT~lN~~SSRSH~IftL~Ve~~~~e~~~~~~~~~~~SrL~fVDLAGSER~~kt~-s~g~rlkEg~~INkS 158 (841)
..|.++|++++|.+|..|||||+||+|+|++.. ...++|+|||||||||..+++ +.|.+++|+.+||+|
T Consensus 264 ~~G~~~R~~~~T~~N~~SSRSH~Ifti~v~~~~----------~~~skL~lVDLAGSER~~~t~~~~~~~~~E~~~INkS 333 (410)
T 1v8k_A 264 NMGSACRTSGQTFANSNSSRSHACFQILLRTKG----------RLHGKFSLVDLAGNERGADTSSADRQTRMEGAEINKS 333 (410)
T ss_dssp HHHHHTCC--------CCCSSEEEEEEEEESSS----------SEEEEEEEEECCCCCC------------TTHHHHHHH
T ss_pred HHHHhhCCcccccCCCCCCCceEEEEEEEEeCC----------cceeEEEEEECCCccccccccccccchhHHHHHHhHH
Confidence 999999999999999999999999999997641 367999999999999998876 467888999999999
Q ss_pred hHHHHHHHHHhhcCCCCcccCCChhhhhccccc-cCCCccceEEeecCCCCCCHHHHHHHHHHHHHhccccccee
Q 003184 159 LLTLSTVIRKLSKGRNGHINYRDSKLTRMLQPC-LGGNARTAIICTLSPARSHVEQTRNTLLFACCAKEVTTKAQ 232 (841)
Q Consensus 159 LlaLg~VI~aLs~gk~~hIPYRDSKLTrLLqdS-LGGNsrT~mIa~ISPa~~~~eETLsTLrFAsrAK~I~n~p~ 232 (841)
|++||+||.+|+++ ..||||||||||+||||+ |||||+|+|||||||+..+++||++||+||+|||.|..+|.
T Consensus 334 L~aLg~vI~aL~~~-~~hIPYRdSKLTrLLqdsllGgnskT~mIa~iSP~~~~~~ETlsTLrfA~rak~i~~~~~ 407 (410)
T 1v8k_A 334 LLALKECIRALGQN-KAHTPFRESKLTQVLRDSFIGENSRTCMIAMISPGISSCEYTLNTLRYADRVKELSHHHH 407 (410)
T ss_dssp HHHHHHHHHHHTC-------CCCCHHHHHTTHHHHSSSEEEEEEEEECCBGGGHHHHHHHHHHHHHHHTTC----
T ss_pred HHHHHHHHHHHhcC-CCCCCcccchhHHHHhhcccCCCceEEEEEEeCCccccHHHHHHHHHHHHHhccCCCCCC
Confidence 99999999999875 459999999999999999 69999999999999999999999999999999999988764
No 26
>3u06_A Protein claret segregational; motor domain, stalk rotation, power stroke, kinesin-14, MICR binding, NCD, transport, molecular motor; HET: ADP GOL; 2.35A {Drosophila melanogaster} PDB: 2ncd_A* 1n6m_A* 1cz7_A* 3l1c_A*
Probab=100.00 E-value=6.1e-54 Score=478.55 Aligned_cols=225 Identities=36% Similarity=0.522 Sum_probs=187.1
Q ss_pred CCcHHHHHHHHHHHHHhcC--CCeEEEEEEEEEEEcCceeecCCCCCCC--ceeeeCCCCCeEecccEEEEecCHHHHHH
Q 003184 2 TGITECTVADIFDYIHRHE--ERAFVLKFSAMEIYNEAIRDLLSTDNTP--LRLLDDPEKGVVVEKVTEEILKDWNHLKE 77 (841)
Q Consensus 2 ~GIIprav~dLF~~Ie~~~--e~efsV~vSylEIYNE~V~DLLs~~~~~--L~I~ed~~~gv~V~gLtev~V~S~eel~~ 77 (841)
+|||||++++||+.|...+ +..|.|+|||+|||||.|+|||++...+ +++.+++.++++|.|++++.|.++++++.
T Consensus 163 ~Giipr~~~~lF~~i~~~~~~~~~~~v~vS~~EIYnE~i~DLL~~~~~~~~i~~~~~~~~~~~v~gl~~~~v~s~~e~~~ 242 (412)
T 3u06_A 163 VGVIPRTVDLLFDSIRGYRNLGWEYEIKATFLEIYNEVLYDLLSNEQKDMEIRMAKNNKNDIYVSNITEETVLDPNHLRH 242 (412)
T ss_dssp ECHHHHHHHHHHHHHHHHGGGTEEEEEEEEEEEEETTEEEETTCCSCCCCCEEECSSCTTSEEETTCCCEECCSHHHHHH
T ss_pred CccHHHHHHHHHHhhhhhcccCceEEEEEEEEEEeCCeeEEcCCCCCCCceeeeeecCCCCEEEcceEEEEeCCHHHHHH
Confidence 6999999999999998643 5799999999999999999999887665 45557888999999999999999999999
Q ss_pred HHHHHHhhcccccccccCCCCCceeEEEEEEeeccccccCCCCcceeEeeeeEeecCCCcccccccchhhhhhhhccccc
Q 003184 78 LLSICEAQRRIGETLLNEKSSRSHQIIRLMIESSAREFLGKENSTTLSASVNFVDLAGSERASQALSTGARLKEGCHINR 157 (841)
Q Consensus 78 LL~~G~~~R~~~sT~lN~~SSRSH~IftL~Ve~~~~e~~~~~~~~~~~SrL~fVDLAGSER~~kt~s~g~rlkEg~~INk 157 (841)
+|..|.++|++++|.+|..|||||+||+|+|.+... .......++|+|||||||||.. .+.+++|+.+||+
T Consensus 243 ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~-----~~~~~~~~kL~lVDLAGSEr~~----~~~rl~E~~~INk 313 (412)
T 3u06_A 243 LMHTAKMNRATASTAGNERSSRSHAVTKLELIGRHA-----EKQEISVGSINLVDLAGSESPK----TSTRMTETKNINR 313 (412)
T ss_dssp HHHHHHHHCC-----CHHHHTTCEEEEEEEEEEEET-----TTTEEEEEEEEEEECCCCCC--------------CTTTH
T ss_pred HHHHHHhcccccccCCCCCCcCceEEEEEEEEEEeC-----CCCCEEEEEEEEEECCCCCcCC----ccchhHhHHHHhH
Confidence 999999999999999999999999999999987532 2344678999999999999984 4689999999999
Q ss_pred chHHHHHHHHHhhcCCCCcccCCChhhhhccccccCCCccceEEeecCCCCCCHHHHHHHHHHHHHhcccccc-eeeccc
Q 003184 158 SLLTLSTVIRKLSKGRNGHINYRDSKLTRMLQPCLGGNARTAIICTLSPARSHVEQTRNTLLFACCAKEVTTK-AQVNVV 236 (841)
Q Consensus 158 SLlaLg~VI~aLs~gk~~hIPYRDSKLTrLLqdSLGGNsrT~mIa~ISPa~~~~eETLsTLrFAsrAK~I~n~-p~vN~~ 236 (841)
||++||+||.+|+++ ..||||||||||+||||+|||||+|+|||||||+..+++||++||+||+|++.|+.. ++.|..
T Consensus 314 SL~aLg~vI~aL~~~-~~hiPyRdSkLT~LLqdsLgGnskt~mI~~vsP~~~~~~ETl~TLrfA~rv~~i~~~~~~~n~~ 392 (412)
T 3u06_A 314 SLSELTNVILALLQK-QDHIPYRNSKLTHLLMPSLGGNSKTLMFINVSPFQDCFQESVKSLRFAASVNSCKMTKAKRNRY 392 (412)
T ss_dssp HHHHHHHHHHHHHTT-CSCCCGGGSHHHHHHGGGTSTTCEEEEEEEECCBGGGHHHHHHHHHHHHHHHHHCC--------
T ss_pred HHHHHHHHHHHHhcc-CCCCCccccHHHHHHHHhcCCCceEEEEEEeCCChhhHHHHHHHHHHHHHHhhccccccccccc
Confidence 999999999999975 569999999999999999999999999999999999999999999999999999844 444543
No 27
>3dc4_A Kinesin-like protein NOD; catalytic domain, ATPase, microtubule, ADP, nucleotide-binding protein, ATP-binding, coiled coil, motor protein; HET: ADP; 1.90A {Drosophila melanogaster} PDB: 3dcb_A* 3dco_N* 3pxn_A*
Probab=100.00 E-value=1.7e-53 Score=465.27 Aligned_cols=213 Identities=31% Similarity=0.435 Sum_probs=170.8
Q ss_pred CCcHHHHHHHHHHHHHhcCC---CeEEEEEEEEEEEcCceeecCCCCCCCceeeeCCCCCeEecccEEEEecCHHHHHHH
Q 003184 2 TGITECTVADIFDYIHRHEE---RAFVLKFSAMEIYNEAIRDLLSTDNTPLRLLDDPEKGVVVEKVTEEILKDWNHLKEL 78 (841)
Q Consensus 2 ~GIIprav~dLF~~Ie~~~e---~efsV~vSylEIYNE~V~DLLs~~~~~L~I~ed~~~gv~V~gLtev~V~S~eel~~L 78 (841)
+|||||++++||+.|+...+ ..|.|+|||+|||||+|+|||++..... ..+..+.|++++.|.+++|++.+
T Consensus 125 ~GIipra~~~LF~~i~~~~~~~~~~~~v~vS~~EIYnE~i~DLL~~~~~~~------~~~~~~~~~~~~~v~s~~e~~~l 198 (344)
T 3dc4_A 125 LGILPRALGDIFERVTARQENNKDAIQVYASFIEIYNEKPFDLLGSTPHMP------MVAARCQRCTCLPLHSQADLHHI 198 (344)
T ss_dssp CCHHHHHHHHHHHHHHHSSSSCSSCCEEEEEEEEEESSCEEETTSSCTTSB------CCSSTTTCSCCEECSSHHHHHHH
T ss_pred CCcHHHHHHHHHHHHHhhhhccccceEEEEEEEEEeCCeeEEccCCCCCCc------cccccccCceecccCCHHHHHHH
Confidence 69999999999999987543 4799999999999999999998765421 12334568999999999999999
Q ss_pred HHHHHhhcccccccccCCCCCceeEEEEEEeeccccccCCCCcceeEeeeeEeecCCCcccccccchhhhhhhhcccccc
Q 003184 79 LSICEAQRRIGETLLNEKSSRSHQIIRLMIESSAREFLGKENSTTLSASVNFVDLAGSERASQALSTGARLKEGCHINRS 158 (841)
Q Consensus 79 L~~G~~~R~~~sT~lN~~SSRSH~IftL~Ve~~~~e~~~~~~~~~~~SrL~fVDLAGSER~~kt~s~g~rlkEg~~INkS 158 (841)
|..|.++|++++|.+|..|||||+||+|+|++. ...++|+|||||||||+.++++.|.+++|+.+||+|
T Consensus 199 l~~g~~~R~~~~T~~N~~SSRSH~Ifti~v~~~-----------~~~skl~lVDLAGSEr~~~t~~~g~r~~E~~~INkS 267 (344)
T 3dc4_A 199 LELGTRNRRVRPTNMNSNSSRSHAIVTIHVKSK-----------THHSRMNIVDLAGSEGVRRTGHEGVARQEGVNINLG 267 (344)
T ss_dssp HHHHHHTCC----------CCEEEEEEEEEECS-----------SCEEEEEEEECCCCCCC-------------CCSCCH
T ss_pred HHHHHhhcccccccCCCCCCCceEEEEEEEEec-----------CcEEEEEEEECCCCccccccccccchhHHHHHHhHh
Confidence 999999999999999999999999999999752 257899999999999999999999999999999999
Q ss_pred hHHHHHHHHHhhcCCCCcccCCChhhhhccccccCCCccceEEeecCCCCCCHHHHHHHHHHHHHhccccccee
Q 003184 159 LLTLSTVIRKLSKGRNGHINYRDSKLTRMLQPCLGGNARTAIICTLSPARSHVEQTRNTLLFACCAKEVTTKAQ 232 (841)
Q Consensus 159 LlaLg~VI~aLs~gk~~hIPYRDSKLTrLLqdSLGGNsrT~mIa~ISPa~~~~eETLsTLrFAsrAK~I~n~p~ 232 (841)
|++||+||.+|+.++ .|||||||||||||||+|||||+|+|||||||+..+++||++||+||+||++....|.
T Consensus 268 L~aLg~vI~aL~~~~-~hiPyRdSkLT~lLqdsLgGnskt~mIa~isP~~~~~~ETlsTL~fA~ra~~~~~~~~ 340 (344)
T 3dc4_A 268 LLSINKVVMSMAAGH-TVIPYRDSVLTTVLQASLTAQSYLTFLACISPHQCDLSETLSTLRFGTSAKAAALEHH 340 (344)
T ss_dssp HHHHHHHHHHHHTTC-SSCCGGGSHHHHHTTTTSSTTCEEEEEEEECCCGGGHHHHHHHHHHHHHHHHHTTTC-
T ss_pred HHHHHHHHHHHhccC-CcCCccccHHHHHHHHHhCCCCEEEEEEEeCCchhhHHHHHHHHHHHHHHhhcCCCCC
Confidence 999999999999865 5999999999999999999999999999999999999999999999999999876553
No 28
>4h1g_A Maltose binding protein-cakar3 motor domain fusio; kinesin motor domain, motor protein, chimera; HET: MTT ADP EDO; 2.15A {Escherichia coli}
Probab=100.00 E-value=3.9e-53 Score=500.52 Aligned_cols=222 Identities=32% Similarity=0.450 Sum_probs=183.9
Q ss_pred CCcHHHHHHHHHHHHHhcC--CCeEEEEEEEEEEEcCceeecCCCCC---CCceeeeCC-CCCeEecccEEEEecCHHHH
Q 003184 2 TGITECTVADIFDYIHRHE--ERAFVLKFSAMEIYNEAIRDLLSTDN---TPLRLLDDP-EKGVVVEKVTEEILKDWNHL 75 (841)
Q Consensus 2 ~GIIprav~dLF~~Ie~~~--e~efsV~vSylEIYNE~V~DLLs~~~---~~L~I~ed~-~~gv~V~gLtev~V~S~eel 75 (841)
+|||||++++||+.|+... +..|.|+|||+|||||+|+|||++.. ..+.++++. .++++|.||+++.|.|.+++
T Consensus 485 ~Giipr~~~~lf~~~~~~~~~~~~~~v~~s~~Eiyne~i~DLl~~~~~~~~~~~~~~~~~~g~~~v~~l~~~~v~~~~~~ 564 (715)
T 4h1g_A 485 NGMIPLSLKKIFNDIEELKEKGWSYTVRGKFIEIYNEAIVDLLNPKIDPNTKYEIKHDDIAGKTTVTNVSTIDIKSPEQA 564 (715)
T ss_dssp TSHHHHHHHHHHHHHHHHGGGTEEEEEEEEEEEEETTEEEESSSCCCCTTCCCCEEEETTTTEEEETTCCCEECSCHHHH
T ss_pred CCcHHHHHHHHHHHHHHhhcCCceEEEEEEEEEEECCEEEECCCCCCCCCCcceeEEecCCCCEEEeCCEEEEcCCHHHH
Confidence 6999999999999998644 56899999999999999999998753 356676655 45599999999999999999
Q ss_pred HHHHHHHHhhcccccccccCCCCCceeEEEEEEeeccccccCCCCcceeEeeeeEeecCCCcccccccchhhhhhhhccc
Q 003184 76 KELLSICEAQRRIGETLLNEKSSRSHQIIRLMIESSAREFLGKENSTTLSASVNFVDLAGSERASQALSTGARLKEGCHI 155 (841)
Q Consensus 76 ~~LL~~G~~~R~~~sT~lN~~SSRSH~IftL~Ve~~~~e~~~~~~~~~~~SrL~fVDLAGSER~~kt~s~g~rlkEg~~I 155 (841)
+.+|..|.++|++++|.+|..|||||+||+|+|++... .......|+|+|||||||||..++++.|.|++|+.+|
T Consensus 565 ~~~~~~g~~~r~~~~t~~n~~ssRSH~i~~i~~~~~~~-----~~~~~~~~~l~lvDLAGsEr~~~~~~~g~~~~E~~~I 639 (715)
T 4h1g_A 565 ITILNQANKKRSTAATKSNDHSSRSHSIFIIDLQGYNS-----LTKESSYGTLNLIDLAGSERLNNSRAEGDRLKETQAI 639 (715)
T ss_dssp HHHHHHHHCC----------CGGGSEEEEEEEEEEEET-----TTCCEEEEEEEEEECCCCCC---------CHHHHHHH
T ss_pred HHHHHHHHhccCcccccccCccccccEEEEEEEEEEec-----CCCCEeEEEEEEEeCCCcccccccCChhHHHHHHHHH
Confidence 99999999999999999999999999999999987532 2334678999999999999999999999999999999
Q ss_pred ccchHHHHHHHHHhhcCCCCcccCCChhhhhccccccCCCccceEEeecCCCCCCHHHHHHHHHHHHHhcccc
Q 003184 156 NRSLLTLSTVIRKLSKGRNGHINYRDSKLTRMLQPCLGGNARTAIICTLSPARSHVEQTRNTLLFACCAKEVT 228 (841)
Q Consensus 156 NkSLlaLg~VI~aLs~gk~~hIPYRDSKLTrLLqdSLGGNsrT~mIa~ISPa~~~~eETLsTLrFAsrAK~I~ 228 (841)
|+||++|++||.+|+.++..|||||||||||||||+|||||+|+|||||||+..+++||++||+||+|||+|+
T Consensus 640 N~sL~~L~~vi~al~~~~~~~vpyR~SkLT~lL~~slggn~~t~~i~~isp~~~~~~et~~tL~fa~r~~~i~ 712 (715)
T 4h1g_A 640 NKSLSCLGDVIHSLNLKDGSHVPYRNSKLTYLLKHSLGGNSKTLMFVNISPLTKDLNETINSLRFATKVNNTR 712 (715)
T ss_dssp HHHHHHHHHHHHHHHHCSCCCCCGGGCHHHHHTGGGTSTTCEEEEEEEECCBGGGHHHHHHHHHHHHHHCC--
T ss_pred HHHHHHHHHHHHHHhhcCCCcCCCccCHHHHHHHhhcCCCceEEEEEEECCChhhHHHHHHHHHHHHHhccce
Confidence 9999999999999987777799999999999999999999999999999999999999999999999999996
No 29
>2kin_B Kinesin; motor protein, cytoskeleton; HET: ADP; 2.00A {Rattus norvegicus} SCOP: c.37.1.9
Probab=99.96 E-value=4.6e-30 Score=234.87 Aligned_cols=99 Identities=38% Similarity=0.571 Sum_probs=95.3
Q ss_pred hcccccchHHHHHHHHHhhcCCCCcccCCChhhhhccccccCCCccceEEeecCCCCCCHHHHHHHHHHHHHhcccccce
Q 003184 152 GCHINRSLLTLSTVIRKLSKGRNGHINYRDSKLTRMLQPCLGGNARTAIICTLSPARSHVEQTRNTLLFACCAKEVTTKA 231 (841)
Q Consensus 152 g~~INkSLlaLg~VI~aLs~gk~~hIPYRDSKLTrLLqdSLGGNsrT~mIa~ISPa~~~~eETLsTLrFAsrAK~I~n~p 231 (841)
+.+||+||++||+||.+|+.++..||||||||||+||||+|||||+|+|||||||+..+++||++||+||+||+.|+|.|
T Consensus 1 a~~IN~SL~~Lg~vI~aL~~~~~~hvPyRdSkLT~lL~dsLgGnskt~mi~~vsp~~~~~~ETl~TL~fA~rak~i~~~~ 80 (100)
T 2kin_B 1 AKNINKSLSALGNVISALAEGTKTHVPYRDSKMTRILQDSLDGNCRTTIVICCSPSVFNEAETKSTLMFGQRAKTIKNTV 80 (100)
T ss_dssp CCBSSHHHHHHHHHHHHHHHTCCSSCCGGGCHHHHHTHHHHHSSEEEEEEEEECCBGGGHHHHHHHHHHHHHHHTCEEEE
T ss_pred CCcchHHHHHHHHHHHHHHhcCCCCCCCccchHHHHHHHHhcCCCceeEEEEeCcccchHHHHHHHHHHHHHHHhccCcc
Confidence 46899999999999999998877899999999999999999999999999999999999999999999999999999999
Q ss_pred eeccccCHHHHHHHHHHHH
Q 003184 232 QVNVVMSDKALVKHLQKEL 250 (841)
Q Consensus 232 ~vN~~~s~~alik~Lq~Ei 250 (841)
.+|...+...++++|++|+
T Consensus 81 ~~n~~~~~~~l~~~~~~e~ 99 (100)
T 2kin_B 81 SVNLELTAEEWKKKYEKEK 99 (100)
T ss_dssp CCEEECCHHHHHHHHHHHH
T ss_pred eeccCCCHHHHHHHHHHhh
Confidence 9999999999999998886
No 30
>3kin_B Kinesin heavy chain; motor protein, cytoskeleton; HET: ADP; 3.10A {Rattus norvegicus} SCOP: c.37.1.9
Probab=99.95 E-value=3.3e-28 Score=228.63 Aligned_cols=98 Identities=39% Similarity=0.588 Sum_probs=91.6
Q ss_pred ccchHHHHHHHHHhhcCCCCcccCCChhhhhccccccCCCccceEEeecCCCCCCHHHHHHHHHHHHHhcccccceeecc
Q 003184 156 NRSLLTLSTVIRKLSKGRNGHINYRDSKLTRMLQPCLGGNARTAIICTLSPARSHVEQTRNTLLFACCAKEVTTKAQVNV 235 (841)
Q Consensus 156 NkSLlaLg~VI~aLs~gk~~hIPYRDSKLTrLLqdSLGGNsrT~mIa~ISPa~~~~eETLsTLrFAsrAK~I~n~p~vN~ 235 (841)
|+||++||+||.+|+.++..||||||||||+||+|+|||||+|+|||||+|+..+++||++||+||++|+.|+|+|.+|.
T Consensus 1 N~SL~~Lg~vi~aL~~~~~~hvPyRdSkLT~lL~dsLggn~~t~~i~~isp~~~~~~eTl~TL~fa~rak~i~n~~~~n~ 80 (117)
T 3kin_B 1 NKSLSALGNVISALAEGTKTHVPYRDSKMTRILQDSLGGNCRTTIVICCSPSVFNEAETKSTLMFGQRAKTIKNTVSVNL 80 (117)
T ss_dssp CCHHHHHHHHHHHHHHSCCSSCCGGGSHHHHHTHHHHHSSSEEEEEEEECCSGGGHHHHHHHHHHHHHHTTCEEEECCCB
T ss_pred CCCHHHHHHHHHHHHhCCCCCCCCcchHHHHHHHHHcCCCccceeeeeeCCCcccHHHHHHHHHHHHHhCcccCCceecC
Confidence 89999999999999998778999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCHHHHHHHHHHHHHHH
Q 003184 236 VMSDKALVKHLQKELARL 253 (841)
Q Consensus 236 ~~s~~alik~Lq~EiarL 253 (841)
..+...+++.|++++.++
T Consensus 81 ~~~~~~l~~~~~~e~~~~ 98 (117)
T 3kin_B 81 ELTAEEWKKKYEKEKEKN 98 (117)
T ss_dssp CCCHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHH
Confidence 999888777776665443
No 31
>2o0a_A S.cerevisiae chromosome XVI reading frame ORF YPL253C; VIK1, motor homology domain, kinesin, motor domain, microtubule-binding; 1.60A {Saccharomyces cerevisiae}
Probab=97.33 E-value=4.1e-05 Score=81.60 Aligned_cols=186 Identities=12% Similarity=0.141 Sum_probs=111.3
Q ss_pred CcHHHHHHHHHHHHHh-cCCCeEEEEEEEEEEE-cCceeecCCCCC--CCceeeeCCCCCeEecccEEEEecC-HHHHHH
Q 003184 3 GITECTVADIFDYIHR-HEERAFVLKFSAMEIY-NEAIRDLLSTDN--TPLRLLDDPEKGVVVEKVTEEILKD-WNHLKE 77 (841)
Q Consensus 3 GIIprav~dLF~~Ie~-~~e~efsV~vSylEIY-NE~V~DLLs~~~--~~L~I~ed~~~gv~V~gLtev~V~S-~eel~~ 77 (841)
|=+|||+..+|...+. .. ..|.+.+||+||| ||.++|||.... ..+.|+-+..++++|.|++.+.|.+ .+|+..
T Consensus 105 GKT~ral~q~f~~~~~~~~-~~Y~~tlq~veLy~Ne~~~DLL~~~~~~~k~eIk~~~~g~~iv~~s~~i~V~~~~edv~~ 183 (298)
T 2o0a_A 105 GSLRESLIKFLAEKDTIYQ-KQYVITLQFVFLSDDEFSQDMLLDYSHNDKDSIKLKFEKHSISLDSKLVIIENGLEDLPL 183 (298)
T ss_dssp HHHHHHHHHHHHSTTSHHH-HHEEEEEEEEEEECC-CEEETTSCCC------CEEEECSSCEEEESCCEEESSGGGGSCT
T ss_pred CccHHHHHHHHHHhhhhcc-cceEEEEEEEEEecCCchHHhcCCCCCCCcceEEecCCCCEEecccEEEEccccHHHHHH
Confidence 4469999999986643 22 7899999999999 999999996332 3567777888999999999999999 899887
Q ss_pred HHHHHHhhcccccccccCCCCCceeEEEEEEeeccccccCCCCcceeEeeeeEeecCCCcccccccchhhhhhhhccccc
Q 003184 78 LLSICEAQRRIGETLLNEKSSRSHQIIRLMIESSAREFLGKENSTTLSASVNFVDLAGSERASQALSTGARLKEGCHINR 157 (841)
Q Consensus 78 LL~~G~~~R~~~sT~lN~~SSRSH~IftL~Ve~~~~e~~~~~~~~~~~SrL~fVDLAGSER~~kt~s~g~rlkEg~~INk 157 (841)
++..+.. +.+|+ +.-.|+.+.+........+.. ....--++|+.+.-..-
T Consensus 184 ~~~~~~~------~~~~~---~gi~i~k~~~~~~~~~~~~~~--~~~~~d~yf~e~~~~~~------------------- 233 (298)
T 2o0a_A 184 NFSCDEH------PNLPH---SGMGIIKVQFFPRDSKSDGNN--DPVPVDFYFIELNNLKS------------------- 233 (298)
T ss_dssp TTTCC----------------CEEEEEEEEEEESCC---------CCCEEEEEEEECSHHH-------------------
T ss_pred Hhhcccc------cccCC---CCceEEEEEEecCcccccccC--CCCceEEEEEEeCCHHH-------------------
Confidence 7722221 12222 234566666544211111111 11233477777643221
Q ss_pred chHHHHHHHHHhhcCCCCcccCCChhhhhccccccCCCccceEEeecCCCCCCHHHHHHHHHHHHHhcccccceee
Q 003184 158 SLLTLSTVIRKLSKGRNGHINYRDSKLTRMLQPCLGGNARTAIICTLSPARSHVEQTRNTLLFACCAKEVTTKAQV 233 (841)
Q Consensus 158 SLlaLg~VI~aLs~gk~~hIPYRDSKLTrLLqdSLGGNsrT~mIa~ISPa~~~~eETLsTLrFAsrAK~I~n~p~v 233 (841)
...|.+ ++..+. +-.|+++-+|+..|. ..+.++++++...... -.-|..+.++.++.|....
T Consensus 234 -~~~l~~---~~~~~~-----~~~spi~~il~~ll~-~tks~~~~~l~~~~~~----~~lL~~s~~i~~~~~~~~~ 295 (298)
T 2o0a_A 234 -IEQFDK---SIFKKE-----SCETPIALVLKKLIS-DTKSFFLLNLNDSKNV----NKLLTISEEVQTQLCKRKK 295 (298)
T ss_dssp -HHHHHH---HHHTC------CCCSHHHHHHHHHHH-HSBCEEEEEECCGGGH----HHHHHHHHHHHHHTC----
T ss_pred -HHHHHh---hccccc-----ccCCcHHHHHHHHHh-cCcceEEEEecCCCch----hHHHHHHHHhhcccCcccc
Confidence 122322 333332 345778888877664 5788999999765422 2378888888888776543
No 32
>3sjb_C Golgi to ER traffic protein 1; coiled-coil, receptor complex, TA-protein biogenesis, GET PA hydrolase-transport protein complex; 3.30A {Saccharomyces cerevisiae}
Probab=76.56 E-value=11 Score=33.93 Aligned_cols=66 Identities=17% Similarity=0.129 Sum_probs=49.3
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 003184 239 DKALVKHLQKELARLESELRSPAPASSTCDYVALLRKKDLQIQKMEREIRELTKQRDLAQSRVEDLLRMV 308 (841)
Q Consensus 239 ~~alik~Lq~EiarLe~eL~~~~~~~s~~~~~~~l~ekd~qi~kle~ei~eL~~qrd~~q~r~e~l~~~~ 308 (841)
.....++|+.|+..|+.|+...... |.-+.-.+...++.+|.++++.+.+++...+..++-.+..+
T Consensus 21 ~a~~~~~lk~E~~~lk~E~~stSaQ----DeFAKWaKL~Rk~DKl~~ele~l~~~l~~~k~~F~~~~~~~ 86 (93)
T 3sjb_C 21 LSKKYLAKVKERHELKEFNNSISAQ----DNYAKWTKNNRKLDSLDKEINNLKDEIQSENKAFQAHLHKL 86 (93)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTSCTT----TCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC----
T ss_pred hHHHHHHHHHHHHHHHHHHhccchH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3456789999999999999876543 34455667788899999999999999998888777554433
No 33
>2jee_A YIIU; FTSZ, septum, coiled-coil, cell division, cell cycle, hypothetical protein; 2.8A {Escherichia coli}
Probab=69.00 E-value=33 Score=30.24 Aligned_cols=59 Identities=24% Similarity=0.293 Sum_probs=40.0
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 003184 242 LVKHLQKELARLESELRSPAPASSTCDYVALLRKKDLQIQKMEREIRELTKQRDLAQSRVEDLLRMVG 309 (841)
Q Consensus 242 lik~Lq~EiarLe~eL~~~~~~~s~~~~~~~l~ekd~qi~kle~ei~eL~~qrd~~q~r~e~l~~~~~ 309 (841)
.|.-||.||..|+.+-. .......+.......+..++.+|+.++..-+.|+..|+..+.
T Consensus 21 tI~lLqmEieELKekN~---------~L~~e~~e~~~~~~~L~~en~qLk~E~~~wq~Rl~~LLgk~e 79 (81)
T 2jee_A 21 TITLLQMEIEELKEKNN---------SLSQEVQNAQHQREELERENNHLKEQQNGWQERLQALLGRME 79 (81)
T ss_dssp HHHHHHHHHHHHHHHHH---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHH---------HHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 45566667777766642 122233333444556888999999999999999999887654
No 34
>3sja_C Golgi to ER traffic protein 1; coiled-coil, receptor complex, TA-protein biogenesis, GET PA hydrolase-transport protein complex; 3.00A {Saccharomyces cerevisiae} PDB: 3sjc_C
Probab=67.52 E-value=23 Score=29.99 Aligned_cols=51 Identities=20% Similarity=0.175 Sum_probs=35.2
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003184 241 ALVKHLQKELARLESELRSPAPASSTCDYVALLRKKDLQIQKMEREIRELTKQRD 295 (841)
Q Consensus 241 alik~Lq~EiarLe~eL~~~~~~~s~~~~~~~l~ekd~qi~kle~ei~eL~~qrd 295 (841)
...++|+.|+..|+.|+...... |.-+.-.+...++.+|.++++.+.++++
T Consensus 6 ~~~~~l~~E~~~lk~E~~stSaQ----DeFAKWaKL~Rk~DKl~~ele~l~~~l~ 56 (65)
T 3sja_C 6 KKYLAKVKERHELKEFNNSISAQ----DNYAKWTKNNRKLDSLDKEINNLKDEIQ 56 (65)
T ss_dssp HHHHHHHHHHHHHHHHHTTSCTT----TTHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhccchH----HHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 45789999999999999876543 3344445556666667666666665554
No 35
>3nmd_A CGMP dependent protein kinase; leucine zipper, coiled-coil, structural genomics, berkeley S genomics center, BSGC, dimerization; HET: MSE; 2.27A {Homo sapiens}
Probab=63.76 E-value=8.8 Score=33.10 Aligned_cols=30 Identities=20% Similarity=0.212 Sum_probs=11.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003184 275 KKDLQIQKMEREIRELTKQRDLAQSRVEDL 304 (841)
Q Consensus 275 ekd~qi~kle~ei~eL~~qrd~~q~r~e~l 304 (841)
+++.+|...+..|++|.++++.....+..|
T Consensus 30 ~K~eELr~kd~~I~eLEk~L~ekd~eI~~L 59 (72)
T 3nmd_A 30 EKIEELRQRDALIDELELELDQKDELIQML 59 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333333333333333333333333333333
No 36
>3hnw_A Uncharacterized protein; coiled-coil, structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.20A {Eubacterium eligens}
Probab=60.14 E-value=46 Score=31.82 Aligned_cols=40 Identities=18% Similarity=0.204 Sum_probs=25.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 003184 270 VALLRKKDLQIQKMEREIRELTKQRDLAQSRVEDLLRMVG 309 (841)
Q Consensus 270 ~~~l~ekd~qi~kle~ei~eL~~qrd~~q~r~e~l~~~~~ 309 (841)
...+...+.+++.+++++.+|+++...++.++..|...++
T Consensus 95 K~el~~~~~k~e~~~~e~~~l~~~~~~l~~~~~~le~~~~ 134 (138)
T 3hnw_A 95 KHELIAAQIKAESSAKEIKELKSEINKYQKNIVKLETELN 134 (138)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444556666667777777777777777766666654443
No 37
>3nmd_A CGMP dependent protein kinase; leucine zipper, coiled-coil, structural genomics, berkeley S genomics center, BSGC, dimerization; HET: MSE; 2.27A {Homo sapiens}
Probab=58.53 E-value=28 Score=30.00 Aligned_cols=46 Identities=24% Similarity=0.380 Sum_probs=26.7
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003184 243 VKHLQKELARLESELRSPAPASSTCDYVALLRKKDLQIQKMEREIRELTKQRDLAQSRVEDL 304 (841)
Q Consensus 243 ik~Lq~EiarLe~eL~~~~~~~s~~~~~~~l~ekd~qi~kle~ei~eL~~qrd~~q~r~e~l 304 (841)
+.+||..+.....+| +.++..|+.+++++.+...++..+++++..+
T Consensus 21 i~eLq~~L~~K~eEL----------------r~kd~~I~eLEk~L~ekd~eI~~LqseLDKf 66 (72)
T 3nmd_A 21 LRDLQYALQEKIEEL----------------RQRDALIDELELELDQKDELIQMLQNELDKY 66 (72)
T ss_dssp HHHHHHHHHHHHHHH----------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHH----------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 566666665555554 3455556666666666666666665555433
No 38
>3vlc_E Golgi to ER traffic protein 1; ATPase, membrane protein insertion, ATP binding, membrane PR binding; HET: ADP; 4.50A {Saccharomyces cerevisiae}
Probab=56.14 E-value=6.7 Score=35.46 Aligned_cols=58 Identities=17% Similarity=0.153 Sum_probs=42.8
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003184 241 ALVKHLQKELARLESELRSPAPASSTCDYVALLRKKDLQIQKMEREIRELTKQRDLAQSRVE 302 (841)
Q Consensus 241 alik~Lq~EiarLe~eL~~~~~~~s~~~~~~~l~ekd~qi~kle~ei~eL~~qrd~~q~r~e 302 (841)
...++|+.|+..|+.|+...... |.-+.-.+...++.+|.+|++.+.+++...+..+.
T Consensus 30 ~~~~~lk~E~~~lk~E~~stSaQ----DEFAKWAKL~Rk~DKl~~ele~l~~~L~s~ks~fd 87 (94)
T 3vlc_E 30 KKYLAKVKERHELKEFNNSISAQ----DNYAKWTKNNRKLDSLDKEINNLKDEIQSENKAFQ 87 (94)
T ss_dssp HHHHHHHHHHHHHHHHHTTSCTT----TCHHHHHHHHHHHHHHHHHTTTHHHHTTTTHHHHT
T ss_pred HHHHHHHHHHHHHHHHHhccchH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45789999999999999876543 33455556677788888888888777776665544
No 39
>3i00_A HIP-I, huntingtin-interacting protein 1; transcription; 2.30A {Homo sapiens} PDB: 2qa7_A
Probab=55.63 E-value=44 Score=31.31 Aligned_cols=67 Identities=16% Similarity=0.237 Sum_probs=37.2
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 003184 239 DKALVKHLQKELARLESELRSPAPASSTCDYVALLRKKDLQIQKMEREIRELTKQRDLAQSRVEDLLRMVGC 310 (841)
Q Consensus 239 ~~alik~Lq~EiarLe~eL~~~~~~~s~~~~~~~l~ekd~qi~kle~ei~eL~~qrd~~q~r~e~l~~~~~~ 310 (841)
...+|.+|+.+|.+|+.++.... ......+.....+|..|+.++.+-+.+++.+....+.|...+..
T Consensus 13 rD~~Ie~Lkreie~lk~ele~l~-----~E~q~~v~ql~~~i~~Le~eL~e~r~~~q~a~~e~e~Lr~e~~~ 79 (120)
T 3i00_A 13 KDHLIERLYREISGLKAQLENMK-----TESQRVVLQLKGHVSELEADLAEQQHLRQQAADDCEFLRAELDE 79 (120)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34689999999999999996431 11122222333444444544444444444444445555544443
No 40
>3hnw_A Uncharacterized protein; coiled-coil, structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.20A {Eubacterium eligens}
Probab=51.73 E-value=52 Score=31.45 Aligned_cols=53 Identities=19% Similarity=0.224 Sum_probs=33.2
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003184 242 LVKHLQKELARLESELRSPAPASSTCDYVALLRKKDLQIQKMEREIRELTKQRDLAQSRVED 303 (841)
Q Consensus 242 lik~Lq~EiarLe~eL~~~~~~~s~~~~~~~l~ekd~qi~kle~ei~eL~~qrd~~q~r~e~ 303 (841)
.+..+.+|+..|+.+|. .....+.+...++.++++++.+|+.+...++..+.+
T Consensus 83 ~l~~~~kE~~~lK~el~---------~~~~k~e~~~~e~~~l~~~~~~l~~~~~~le~~~~~ 135 (138)
T 3hnw_A 83 DIENKDKEIYDLKHELI---------AAQIKAESSAKEIKELKSEINKYQKNIVKLETELND 135 (138)
T ss_dssp HHHHHHHHHHHHHHHHH---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 45555566666666653 223445556667777777777777777777666554
No 41
>3he5_A Synzip1; heterodimeric coiled-coil, de novo protein; 1.75A {Artificial gene}
Probab=43.58 E-value=70 Score=24.66 Aligned_cols=44 Identities=39% Similarity=0.410 Sum_probs=26.1
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003184 242 LVKHLQKELARLESELRSPAPASSTCDYVALLRKKDLQIQKMEREIRELTKQR 294 (841)
Q Consensus 242 lik~Lq~EiarLe~eL~~~~~~~s~~~~~~~l~ekd~qi~kle~ei~eL~~qr 294 (841)
++.+|..|++.|+.+-... ....+.++ .-|.-++++|..|++.+
T Consensus 4 lvaqlenevaslenenetl--------kkknlhkk-dliaylekeianlrkki 47 (49)
T 3he5_A 4 LVAQLENEVASLENENETL--------KKKNLHKK-DLIAYLEKEIANLRKKI 47 (49)
T ss_dssp HHHHHHHHHHHHHHHHHHH--------HHHHHHHH-HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhcccHHH--------HHhcccHH-HHHHHHHHHHHHHHHHh
Confidence 6788999999998875321 11122222 23556777777666554
No 42
>3a7p_A Autophagy protein 16; coiled-coil, coiled coil, cytoplasmic vesicle, protein transport, transport, vacuole; 2.80A {Saccharomyces cerevisiae}
Probab=42.56 E-value=1.4e+02 Score=29.23 Aligned_cols=57 Identities=23% Similarity=0.331 Sum_probs=36.2
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003184 241 ALVKHLQKELARLESELRSPAPASSTCDYVALLRKKDLQIQKMEREIRELTKQRDLAQSRVEDLLR 306 (841)
Q Consensus 241 alik~Lq~EiarLe~eL~~~~~~~s~~~~~~~l~ekd~qi~kle~ei~eL~~qrd~~q~r~e~l~~ 306 (841)
..+..|+.+++.|+.++. +....++++...++.+..|+.-|+-+...++.++..+.+
T Consensus 68 ~~I~~L~~El~~l~~ki~---------dLeeel~eK~K~~e~l~DEl~aLqlq~n~lE~kl~kLq~ 124 (152)
T 3a7p_A 68 NTLAILQKELKSKEQEIR---------RLKEVIALKNKNTERLNAALISGTIENNVLQQKLSDLKK 124 (152)
T ss_dssp HHHHHHHHHHHHHHHHHH---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 467778888888777774 344556666666666666666666665555555544433
No 43
>4ayb_H DNA-directed RNA polymerase; transferase, multi-subunit, transcription; 3.20A {Sulfolobus shibatae} PDB: 2wb1_H 2y0s_H 2waq_H 4b1o_H 4b1p_Z 2pmz_H 3hkz_H
Probab=39.98 E-value=16 Score=32.22 Aligned_cols=44 Identities=32% Similarity=0.364 Sum_probs=36.8
Q ss_pred hhCCHHHHHHHHHhhCCCCCcccchhhhhhhccCCcccchhHHHHHHHHHHHhhhcccccccc
Q 003184 751 RRLSADERNKLYQKWGIGLNSKRRRLQLANHLWSNSKDMNRITESAAIIAKLIRFVEQGDALK 813 (841)
Q Consensus 751 ~rl~~~ere~ly~kwgi~l~~k~rrlql~~~lwt~~~d~~hv~esa~~vaklv~~~e~~~~~k 813 (841)
..||.||.+.|..||+|.. -||=.-+++|| ||+.+|+ .+|+..|
T Consensus 21 ~vLs~eE~~~ll~~y~i~~------~qLP~I~~~DP------------va~~~g~-k~GdVvk 64 (84)
T 4ayb_H 21 EVLSIDEAYKILKELGIRP------EQLPWIRASDP------------VARSINA-KPGDIIR 64 (84)
T ss_dssp EECCHHHHHHHHHHHTCCG------GGSCCEESSSH------------HHHHHTC-CTTCEEE
T ss_pred EECCHHHHHHHHHHhcCCH------hHCCeecccCH------------hHHhhCC-CCCCEEE
Confidence 4689999999999999952 38989999999 9999996 5577655
No 44
>3mq9_A Bone marrow stromal antigen 2 fused to maltose-BI periplasmic protein; HIV, antiviral protein; 2.80A {Escherichia coli}
Probab=37.17 E-value=33 Score=38.00 Aligned_cols=63 Identities=17% Similarity=0.278 Sum_probs=28.2
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCcchH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003184 243 VKHLQKELARLESELRSPAPASSTCDY--VALLRKKDLQIQKMEREIRELTKQRDLAQSRVEDLL 305 (841)
Q Consensus 243 ik~Lq~EiarLe~eL~~~~~~~s~~~~--~~~l~ekd~qi~kle~ei~eL~~qrd~~q~r~e~l~ 305 (841)
...||++|.++++-+.......++|+. ..++...+.+..+-++.|+||+.++..+..+++++.
T Consensus 399 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (471)
T 3mq9_A 399 THLLQQELTEAQKGFQDVEAQAATANHTVMALMASLDAEKAQGQKKVEELEGEITTLNHKLQDAS 463 (471)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhHHHHHHHhhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334666666666655433332233433 233333333333333444444444444444444443
No 45
>3s4r_A Vimentin; alpha-helix, cytoskeleton, intermediate filament, structural; 2.45A {Homo sapiens} PDB: 3ssu_A
Probab=36.93 E-value=41 Score=30.01 Aligned_cols=62 Identities=16% Similarity=0.193 Sum_probs=30.6
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003184 239 DKALVKHLQKELARLESELRSPAPASSTCDYVALLRKKDLQIQKMEREIRELTKQRDLAQSRVEDL 304 (841)
Q Consensus 239 ~~alik~Lq~EiarLe~eL~~~~~~~s~~~~~~~l~ekd~qi~kle~ei~eL~~qrd~~q~r~e~l 304 (841)
....|+.|..+++.|+.++...... .....-...+..|..|.++|..+..++..+..++..|
T Consensus 21 yIdKVR~LEqqN~~Le~~i~~l~~~----~~~~~~~~ye~~i~~Lr~~i~~~~~ek~~l~~e~dnl 82 (93)
T 3s4r_A 21 LIDKVRFLEQQNKILLAELEQLKGQ----GKSRLGDLYEEEMRELRRQVDQLTNDKARVEVERDNL 82 (93)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhc----cCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445778888888888776532211 0001111123445555555555555555444444443
No 46
>4emc_A Monopolin complex subunit CSM1; RWD domain, kinetochore-binding, kinetoch replication-replication complex; 3.05A {Saccharomyces cerevisiae} PDB: 3n7n_A 3n4x_A
Probab=35.90 E-value=1.1e+02 Score=30.89 Aligned_cols=42 Identities=26% Similarity=0.333 Sum_probs=26.6
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003184 239 DKALVKHLQKELARLESELRSPAPASSTCDYVALLRKKDLQIQKMEREIRELTKQRDL 296 (841)
Q Consensus 239 ~~alik~Lq~EiarLe~eL~~~~~~~s~~~~~~~l~ekd~qi~kle~ei~eL~~qrd~ 296 (841)
+..+|..|+.|+..|..+|. .++.+|+.|++++..++.+...
T Consensus 18 ad~LV~~L~~En~~L~~ql~----------------~k~~ei~~L~~ql~sl~~~~~~ 59 (190)
T 4emc_A 18 ADLLVANLVNENFVLSEKLD----------------TKATEIKQLQKQIDSLNAQVKE 59 (190)
T ss_dssp --CHHHHHHHHHHHHHHHHH----------------HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH----------------HHHHHHHHHHHHHHHHHhhhhh
Confidence 44588999999999988885 3444555555555555554433
No 47
>1gk4_A Vimentin; intermediate filament, dimer, parallel coiled coil, heptad repeat, stutter; 2.3A {Homo sapiens} SCOP: h.1.20.1
Probab=35.13 E-value=1.3e+02 Score=26.08 Aligned_cols=59 Identities=17% Similarity=0.257 Sum_probs=32.2
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003184 244 KHLQKELARLESELRSPAPASSTCDYVALLRKKDLQIQKMEREIRELTKQRDLAQSRVEDLLRM 307 (841)
Q Consensus 244 k~Lq~EiarLe~eL~~~~~~~s~~~~~~~l~ekd~qi~kle~ei~eL~~qrd~~q~r~e~l~~~ 307 (841)
..++...+.|+..+.... ..+...+......|..++.++.+++.........+++|+..
T Consensus 4 ~~l~~~~~sLE~~l~e~e-----~~~~~~~~~~q~~i~~lE~eL~~~r~e~~~q~~EYq~Llnv 62 (84)
T 1gk4_A 4 DALKGTNESLERQMREME-----ENFAVEAANYQDTIGRLQDEIQNMKEEMARHLREYQDLLNV 62 (84)
T ss_dssp HHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344455555555553211 12233445556667777777777776666555556666543
No 48
>3na7_A HP0958; flagellar biogenesis, flagellum export, C4 Zn-ribbon, coiled post-transcriptional, gene regulation, chaperone; HET: EPE; 2.20A {Helicobacter pylori}
Probab=32.73 E-value=1.3e+02 Score=30.97 Aligned_cols=24 Identities=17% Similarity=0.231 Sum_probs=10.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Q 003184 278 LQIQKMEREIRELTKQRDLAQSRV 301 (841)
Q Consensus 278 ~qi~kle~ei~eL~~qrd~~q~r~ 301 (841)
..+..+++++.++..+++.++..+
T Consensus 104 ~~i~~lE~eile~~e~ie~~~~~l 127 (256)
T 3na7_A 104 ERSNQANREIENLQNEIKRKSEKQ 127 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444445555544444444433333
No 49
>2v66_B Nuclear distribution protein NUDE-like 1; structural protein, developmental protein, structural protei phosphorylation, transport, microtubule; 2.10A {Homo sapiens}
Probab=32.07 E-value=76 Score=29.45 Aligned_cols=33 Identities=12% Similarity=0.176 Sum_probs=20.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 003184 276 KDLQIQKMEREIRELTKQRDLAQSRVEDLLRMV 308 (841)
Q Consensus 276 kd~qi~kle~ei~eL~~qrd~~q~r~e~l~~~~ 308 (841)
....+..|++++..|+...+.++..+.+|.+.-
T Consensus 33 ~~~~~~~Lq~El~~lr~~~~~l~~~iReLEq~N 65 (111)
T 2v66_B 33 SYKQVSVLEDDLSQTRAIKEQLHKYVRELEQAN 65 (111)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 344566666677666666666666666655543
No 50
>3mq7_A Bone marrow stromal antigen 2; HIV, antiviral protein; 2.28A {Homo sapiens} PDB: 3mqc_A 3mqb_A 3mkx_A 3nwh_A 2xg7_A* 2x7a_A
Probab=30.80 E-value=58 Score=30.47 Aligned_cols=32 Identities=28% Similarity=0.351 Sum_probs=24.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 003184 279 QIQKMEREIRELTKQRDLAQSRVEDLLRMVGC 310 (841)
Q Consensus 279 qi~kle~ei~eL~~qrd~~q~r~e~l~~~~~~ 310 (841)
++++|+.||..|..++..+..+++.|.+....
T Consensus 72 ~vqeLqgEI~~Lnq~Lq~a~ae~erlr~~~~~ 103 (121)
T 3mq7_A 72 KVEELEGEITTLNHKLQDASAEVERLRRENQV 103 (121)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhchh
Confidence 47788888888888888888888877665543
No 51
>2yy0_A C-MYC-binding protein; conserved hypothetical protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.40A {Homo sapiens}
Probab=29.84 E-value=85 Score=25.32 Aligned_cols=28 Identities=11% Similarity=0.178 Sum_probs=13.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 003184 281 QKMEREIRELTKQRDLAQSRVEDLLRMV 308 (841)
Q Consensus 281 ~kle~ei~eL~~qrd~~q~r~e~l~~~~ 308 (841)
+.|..|+.+|+.+.+.+.++++++.+.+
T Consensus 22 eaLk~E~~eLk~k~~~L~~~~~el~~~l 49 (53)
T 2yy0_A 22 ELLRLELAEMKEKYEAIVEENKKLKAKL 49 (53)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344445555555555555555544433
No 52
>2lw1_A ABC transporter ATP-binding protein UUP; ABC REG subfamily, DNA binding protein; NMR {Escherichia coli}
Probab=27.81 E-value=2.3e+02 Score=24.64 Aligned_cols=21 Identities=19% Similarity=0.463 Sum_probs=15.4
Q ss_pred HHHHHHHHHHHHHHHHhcCCC
Q 003184 241 ALVKHLQKELARLESELRSPA 261 (841)
Q Consensus 241 alik~Lq~EiarLe~eL~~~~ 261 (841)
..|..|..+++.|+.+|..+.
T Consensus 29 ~~Ie~LE~~i~~le~~ladp~ 49 (89)
T 2lw1_A 29 QLLEDLEAKLEALQTQVADAS 49 (89)
T ss_dssp HHHHHHHHHHHHHHHHHHSTT
T ss_pred HHHHHHHHHHHHHHHHHhCcc
Confidence 457777788888888887654
No 53
>1l8d_A DNA double-strand break repair RAD50 ATPase; zinc finger, DNA repair, recombination, HOOK motif, replication; HET: DNA CIT; 2.20A {Pyrococcus furiosus} SCOP: h.4.12.1
Probab=27.28 E-value=2.7e+02 Score=24.64 Aligned_cols=38 Identities=13% Similarity=0.242 Sum_probs=24.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 003184 272 LLRKKDLQIQKMEREIRELTKQRDLAQSRVEDLLRMVG 309 (841)
Q Consensus 272 ~l~ekd~qi~kle~ei~eL~~qrd~~q~r~e~l~~~~~ 309 (841)
.+.....++..++.++.+|..++..+..+++.+...+.
T Consensus 65 ~i~~~~~~l~~l~~~i~~l~~~i~~l~~~~~~l~~~~~ 102 (112)
T 1l8d_A 65 LLSKYHLDLNNSKNTLAKLIDRKSELERELRRIDMEIK 102 (112)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44455666666777777777777766666666655544
No 54
>2l5g_B Putative uncharacterized protein NCOR2, G protein pathway suppressor 2; GPS2, SMRT, TBL1, CO-repressor, transcription regulator; NMR {Homo sapiens}
Probab=26.89 E-value=1.3e+02 Score=23.32 Aligned_cols=31 Identities=19% Similarity=0.393 Sum_probs=19.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003184 268 DYVALLRKKDLQIQKMEREIRELTKQRDLAQ 298 (841)
Q Consensus 268 ~~~~~l~ekd~qi~kle~ei~eL~~qrd~~q 298 (841)
+....+..-+.+|.+.+++|.+|++++..++
T Consensus 6 ~l~qkI~kVdrEI~Kte~kI~~lqkKlkeLe 36 (42)
T 2l5g_B 6 ELIQNMDRVDREITMVEQQISKLKKKQQQLE 36 (42)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344555566777777777777766665443
No 55
>1t2k_D Cyclic-AMP-dependent transcription factor ATF-2; protein DNA complex, transcription/DNA complex; 3.00A {Homo sapiens} SCOP: h.1.3.1
Probab=25.67 E-value=1.8e+02 Score=23.55 Aligned_cols=33 Identities=12% Similarity=0.197 Sum_probs=20.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003184 275 KKDLQIQKMEREIRELTKQRDLAQSRVEDLLRM 307 (841)
Q Consensus 275 ekd~qi~kle~ei~eL~~qrd~~q~r~e~l~~~ 307 (841)
+.+.+...|+.++.+|..++..++.++..|...
T Consensus 26 ~Le~~~~~L~~~n~~L~~~i~~L~~e~~~Lk~~ 58 (61)
T 1t2k_D 26 SLEKKAEDLSSLNGQLQSEVTLLRNEVAQLKQL 58 (61)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344455566666666666666666666665544
No 56
>1ci6_A Transcription factor ATF-4; BZIP; 2.60A {Homo sapiens} SCOP: h.1.3.1
Probab=25.45 E-value=1.5e+02 Score=24.42 Aligned_cols=33 Identities=12% Similarity=0.225 Sum_probs=19.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 003184 276 KDLQIQKMEREIRELTKQRDLAQSRVEDLLRMV 308 (841)
Q Consensus 276 kd~qi~kle~ei~eL~~qrd~~q~r~e~l~~~~ 308 (841)
...+.+.|+.++.+|+.+.+.++.++..|...+
T Consensus 28 le~~~~~L~~~N~~L~~~i~~L~~E~~~Lk~ll 60 (63)
T 1ci6_A 28 LTGECKELEKKNEALKERADSLAKEIQYLKDLI 60 (63)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344555566666666666666666666554443
No 57
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=25.23 E-value=2e+02 Score=32.46 Aligned_cols=33 Identities=18% Similarity=0.260 Sum_probs=15.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCC
Q 003184 281 QKMEREIRELTKQRDLAQSRVEDLLRMVGCDQD 313 (841)
Q Consensus 281 ~kle~ei~eL~~qrd~~q~r~e~l~~~~~~~~~ 313 (841)
+..++.+.+++++...+.+++.++.+.+.+.-+
T Consensus 554 ~~~~~~~~~l~~e~~~~~~~~~~l~~~~~~~~~ 586 (597)
T 3oja_B 554 DNKRAKQAELRQETSLKRQKVKQLEAKKNRNPD 586 (597)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTTC----
T ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 334444455555555555556666655555443
No 58
>1lwu_C Fibrinogen gamma chain; heterotrimer, protein-peptide complex, blood clotting; HET: NDG MAN NAG BMA GAL; 2.80A {Petromyzon marinus} SCOP: d.171.1.1 h.1.8.1 PDB: 1n73_C*
Probab=24.91 E-value=1.7e+02 Score=31.76 Aligned_cols=50 Identities=22% Similarity=0.183 Sum_probs=31.2
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 003184 243 VKHLQKELARLESELRSPAPASSTCDYVALLRKKDLQIQKMEREIRELTKQRDLAQSRVEDLLRMV 308 (841)
Q Consensus 243 ik~Lq~EiarLe~eL~~~~~~~s~~~~~~~l~ekd~qi~kle~ei~eL~~qrd~~q~r~e~l~~~~ 308 (841)
++.|..|+.+|+..+ ...+.+|+.|+..+..++.+++.++.++.++....
T Consensus 7 ~~~~~~~~~~~e~~i----------------~~~~~~i~~L~~~l~~~~~~i~~l~~~i~~l~~~~ 56 (323)
T 1lwu_C 7 VQKILEEVRILEQIG----------------VSHDAQIQELSEMWRVNQQFVTRLQQQLVDIRQTC 56 (323)
T ss_dssp HHHHHHHHHHHHHHH----------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHH----------------hcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456666776666544 23456666677777777777776666666665544
No 59
>2wt7_A Proto-oncogene protein C-FOS; transcription, transcription regulation, nucleus, activator, repressor, DNA-binding, phosphoprotein, differentiation; 2.30A {Mus musculus} PDB: 1fos_E* 1a02_F* 1s9k_D
Probab=24.62 E-value=1.9e+02 Score=23.67 Aligned_cols=35 Identities=14% Similarity=0.105 Sum_probs=21.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 003184 274 RKKDLQIQKMEREIRELTKQRDLAQSRVEDLLRMV 308 (841)
Q Consensus 274 ~ekd~qi~kle~ei~eL~~qrd~~q~r~e~l~~~~ 308 (841)
.+...+...|+.++.+|..++..++.++..|..++
T Consensus 26 ~~Le~~v~~L~~~n~~L~~ei~~L~~e~~~Lk~~l 60 (63)
T 2wt7_A 26 DTLQAETDQLEDEKSALQTEIANLLKEKEKLEFIL 60 (63)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34445556666677777777777766666665543
No 60
>3efg_A Protein SLYX homolog; xanthomonas campestris PV. campestris, coiled-coil, structur genomics, PSI-2, protein structure initiative; 2.00A {Xanthomonas campestris PV}
Probab=24.37 E-value=2.1e+02 Score=24.73 Aligned_cols=12 Identities=42% Similarity=0.659 Sum_probs=6.2
Q ss_pred HHHHHHHHHHHh
Q 003184 246 LQKELARLESEL 257 (841)
Q Consensus 246 Lq~EiarLe~eL 257 (841)
+...|..|+..+
T Consensus 12 le~Ri~~LE~kl 23 (78)
T 3efg_A 12 LEARLVELETRL 23 (78)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 444555555554
No 61
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus}
Probab=24.17 E-value=1.4e+02 Score=37.23 Aligned_cols=12 Identities=17% Similarity=0.069 Sum_probs=4.7
Q ss_pred HHHHHHHHHHHH
Q 003184 6 ECTVADIFDYIH 17 (841)
Q Consensus 6 prav~dLF~~Ie 17 (841)
.+.+.+|-..|+
T Consensus 409 ~~LF~wlV~~iN 420 (1080)
T 2dfs_A 409 ANLFNWIVDHVN 420 (1080)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 333334433333
No 62
>1nkp_B MAX protein, MYC proto-oncogene protein; transcription, DNA, BHLHZ, heterodimer, transcription/DNA complex; 1.80A {Homo sapiens} SCOP: a.38.1.1 PDB: 1an2_A* 1r05_A 1nlw_B
Probab=24.07 E-value=3.3e+02 Score=23.11 Aligned_cols=45 Identities=20% Similarity=0.088 Sum_probs=34.3
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC
Q 003184 267 CDYVALLRKKDLQIQKMEREIRELTKQRDLAQSRVEDLLRMVGCD 311 (841)
Q Consensus 267 ~~~~~~l~ekd~qi~kle~ei~eL~~qrd~~q~r~e~l~~~~~~~ 311 (841)
.+....+...-.-|..|+.++.+|..+.+.++.+.+.|.+.+...
T Consensus 36 ~sK~~iL~~Ai~YI~~L~~~~~~l~~e~~~L~~~~~~L~~~l~~L 80 (83)
T 1nkp_B 36 ASRAQILDKATEYIQYMRRKNHTHQQDIDDLKRQNALLEQQVRAL 80 (83)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 455667777777888888888888888888888888777776554
No 63
>1x8y_A Lamin A/C; structural protein, intermediate filament protein; 2.20A {Homo sapiens} SCOP: h.1.20.1 PDB: 3v5b_A 3v4w_A 3v4q_A
Probab=23.95 E-value=90 Score=27.31 Aligned_cols=34 Identities=18% Similarity=0.245 Sum_probs=17.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003184 273 LRKKDLQIQKMEREIRELTKQRDLAQSRVEDLLR 306 (841)
Q Consensus 273 l~ekd~qi~kle~ei~eL~~qrd~~q~r~e~l~~ 306 (841)
+......|..++.++.+++......-..+++|+.
T Consensus 30 l~~~q~~i~~lE~el~~~r~e~~~ql~EYq~Lln 63 (86)
T 1x8y_A 30 RDTSRRLLAEKEREMAEMRARMQQQLDEYQELLD 63 (86)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344455555556655555555444444454443
No 64
>1hjb_A Ccaat/enhancer binding protein beta; transcription/DNA, protein-DNA complex; HET: DNA; 3.0A {Homo sapiens} SCOP: h.1.3.1
Probab=23.05 E-value=1.5e+02 Score=26.30 Aligned_cols=37 Identities=11% Similarity=0.135 Sum_probs=28.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC
Q 003184 275 KKDLQIQKMEREIRELTKQRDLAQSRVEDLLRMVGCD 311 (841)
Q Consensus 275 ekd~qi~kle~ei~eL~~qrd~~q~r~e~l~~~~~~~ 311 (841)
+....+..|++++..|+.+++.++.++..|...+...
T Consensus 40 e~~~r~~~Le~EN~~Lr~~v~~L~~E~~~Lr~ll~~~ 76 (87)
T 1hjb_A 40 ETQHKVLELTAENERLQKKVEQLSRELSTLRNLFKQL 76 (87)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 3445667788899999999999988888877777654
No 65
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=23.03 E-value=2.7e+02 Score=31.35 Aligned_cols=17 Identities=24% Similarity=0.309 Sum_probs=8.2
Q ss_pred HHHHHHHHHHHHHHHhc
Q 003184 242 LVKHLQKELARLESELR 258 (841)
Q Consensus 242 lik~Lq~EiarLe~eL~ 258 (841)
.++.++.++......+.
T Consensus 478 ~l~~~~~~i~~~~~~~~ 494 (597)
T 3oja_B 478 LLQGLHAEIDTNLRRYR 494 (597)
T ss_dssp HHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHhhhhhhhcC
Confidence 34445555555444444
No 66
>1jr5_A 10 kDa anti-sigma factor; all-alpha, helix-turn-helix, coiled-coil, transcription; NMR {Enterobacteria phage T4} SCOP: a.150.1.1 PDB: 1tkv_A 1tl6_A 1tlh_A
Probab=22.78 E-value=58 Score=29.12 Aligned_cols=33 Identities=15% Similarity=0.378 Sum_probs=29.1
Q ss_pred HHHHHhhCCHHHHHHHHHhhCCCCCcccchhhh
Q 003184 746 SKLMRRRLSADERNKLYQKWGIGLNSKRRRLQL 778 (841)
Q Consensus 746 ~k~~~~rl~~~ere~ly~kwgi~l~~k~rrlql 778 (841)
.++|-++||.+||+.|...+..+...=.|+|-.
T Consensus 54 fr~m~~~lt~~ek~elieeFn~G~e~iyr~l~M 86 (90)
T 1jr5_A 54 FRKIVSELTQEDKKTLIDEFNEGFEGVYRYLEM 86 (90)
T ss_dssp HHHHHHTCCHHHHHHHHTTSSSSSTTTTTHHHH
T ss_pred HHHHHHHCCHHHHHHHHHHHhccchHHHHHHHH
Confidence 468999999999999999999998888888753
No 67
>3b2e_E Golgi to ER traffic protein 1; protein-protein interaction, receptor complex, hydrolase, TR protein, ADP binding, coild-coil; HET: ADP; 3.00A {Saccharomyces cerevisiae} PDB: 3zs8_C
Probab=27.41 E-value=19 Score=31.88 Aligned_cols=57 Identities=18% Similarity=0.158 Sum_probs=38.5
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003184 242 LVKHLQKELARLESELRSPAPASSTCDYVALLRKKDLQIQKMEREIRELTKQRDLAQSRVE 302 (841)
Q Consensus 242 lik~Lq~EiarLe~eL~~~~~~~s~~~~~~~l~ekd~qi~kle~ei~eL~~qrd~~q~r~e 302 (841)
...+|+.|+..|+.|+...... |.-+.-.....++.++.++++.+.+++...+..+.
T Consensus 21 ~~~~Lk~Ei~~lk~E~~stSaQ----DEFAKWAKL~Rk~dKl~~ele~~~k~l~~~k~~f~ 77 (84)
T 3b2e_E 21 KYLAKVKERHELKEFNNSISAQ----DNYAKWTKNNRKLDSLDKEINNLKDEIQSENKAFQ 77 (84)
Confidence 4578899999999999765432 33344445566777777777777777666555544
No 68
>3iv1_A Tumor susceptibility gene 101 protein; coiled_COIL, tumorigenesis, CELL_cycle regulation, alternative splicing, cell cycle, cell division; HET: MSE; 2.50A {Homo sapiens}
Probab=21.75 E-value=1.5e+02 Score=25.91 Aligned_cols=32 Identities=22% Similarity=0.425 Sum_probs=21.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003184 275 KKDLQIQKMEREIRELTKQRDLAQSRVEDLLR 306 (841)
Q Consensus 275 ekd~qi~kle~ei~eL~~qrd~~q~r~e~l~~ 306 (841)
+.+.-|.+|+.+-.++.+..+.++...++|.+
T Consensus 43 KL~~mi~~l~~E~~~l~~ni~~lk~K~~EL~~ 74 (78)
T 3iv1_A 43 KLEEMVTRLDQEVAEVDKNIELLKKKDEELSS 74 (78)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34555666777777777777777766666644
No 69
>1x79_B RAB GTPase binding effector protein 1; rabaptin5, GGA protein, GAT domain, intracellular trafficking, protein transport; 2.41A {Homo sapiens} SCOP: h.1.27.2
Probab=21.45 E-value=3.2e+02 Score=25.30 Aligned_cols=19 Identities=32% Similarity=0.338 Sum_probs=13.1
Q ss_pred HHHHHHHHHHHHHHHHhcC
Q 003184 241 ALVKHLQKELARLESELRS 259 (841)
Q Consensus 241 alik~Lq~EiarLe~eL~~ 259 (841)
.-++.|+.+...|+.+|..
T Consensus 6 ~~~~~lq~~~~ql~~qL~k 24 (112)
T 1x79_B 6 DQVKKLQLMLRQANDQLEK 24 (112)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 3467777777777777753
No 70
>3mov_A Lamin-B1; LMNB1, B-type lamins, intermediate filament (IF), nucleus, coiled coil, structural genomics consortium, SGC, structural protein; 2.40A {Homo sapiens} PDB: 3tyy_A
Probab=21.09 E-value=83 Score=28.22 Aligned_cols=35 Identities=23% Similarity=0.238 Sum_probs=18.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003184 272 LLRKKDLQIQKMEREIRELTKQRDLAQSRVEDLLR 306 (841)
Q Consensus 272 ~l~ekd~qi~kle~ei~eL~~qrd~~q~r~e~l~~ 306 (841)
.+......|..++.++.+++.+.......+++|+.
T Consensus 38 e~~~~q~~i~~lE~eL~~~r~e~~~ql~EYq~Lln 72 (95)
T 3mov_A 38 EKDNSRRMLTDKEREMAEIRDQMQQQLNDYEQLLD 72 (95)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444555666666666666555444444444444
No 71
>3m9b_A Proteasome-associated ATPase; coil COIL with 5 beta-strand barrel inter domain, chaperone; 3.94A {Mycobacterium tuberculosis} PDB: 3m9d_A
Probab=20.57 E-value=62 Score=33.96 Aligned_cols=71 Identities=17% Similarity=0.176 Sum_probs=24.4
Q ss_pred HHHHHHHHHHHHHHHHhcCC-CCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCC
Q 003184 241 ALVKHLQKELARLESELRSP-APASSTCDYVALLRKKDLQIQKMEREIRELTKQRDLAQSRVEDLLRMVGCDQ 312 (841)
Q Consensus 241 alik~Lq~EiarLe~eL~~~-~~~~s~~~~~~~l~ekd~qi~kle~ei~eL~~qrd~~q~r~e~l~~~~~~~~ 312 (841)
..+..++.|++.|+..+... ++...... ...++++..++..+..++..|+.++..++.++..|...+...+
T Consensus 24 ~~~~~~~~e~~~l~~~~~~~~~~~~~~~~-~~~l~eL~~ql~~L~arNe~L~~~Lk~ar~El~~LkeElerL~ 95 (251)
T 3m9b_A 24 AELEQLRREAAVLREQLENAVGSHAPTRS-ARDIHQLEARIDSLAARNSKLMETLKEARQQLLALREEVDRLG 95 (251)
T ss_dssp ----------------------------C-CHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhhhcccCcccchh-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 34556777777777766322 00000000 2233455556666666666666666666666666655555544
No 72
>1eik_A RNA polymerase subunit RPB5; RPBH, OCSP, NESG, protein structure initiative, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus} SCOP: d.78.1.1
Probab=20.50 E-value=67 Score=27.98 Aligned_cols=43 Identities=23% Similarity=0.314 Sum_probs=34.2
Q ss_pred hCCHHHHHHHHHhhCCCCCcccchhhhhhhccCCcccchhHHHHHHHHHHHhhhcccccccc
Q 003184 752 RLSADERNKLYQKWGIGLNSKRRRLQLANHLWSNSKDMNRITESAAIIAKLIRFVEQGDALK 813 (841)
Q Consensus 752 rl~~~ere~ly~kwgi~l~~k~rrlql~~~lwt~~~d~~hv~esa~~vaklv~~~e~~~~~k 813 (841)
-||+||.+.|..+++|... ||=+-+=+|| |||-+|+ .+|+..|
T Consensus 16 iLs~eEk~~lL~~y~i~~~------qLP~I~~~DP------------var~~G~-k~GdVvk 58 (77)
T 1eik_A 16 ILNESEAKRVLKELDAHPE------QLPKIKTTDP------------VAKAIGA-KRGDIVK 58 (77)
T ss_dssp EECHHHHHHHHHHTTCCTT------TSCCCBTTSH------------HHHGGGC-CTTCEEE
T ss_pred EcCHHHHHHHHHHcCCCHH------HCCeeeCcCH------------hhHHhCC-CCCCEEE
Confidence 5899999999999999643 6666666777 8999997 5577665
No 73
>3tnu_B Keratin, type II cytoskeletal 5; coiled-coil, structural support, cytosolic protein; 3.00A {Homo sapiens}
Probab=20.05 E-value=2.9e+02 Score=25.50 Aligned_cols=67 Identities=10% Similarity=0.202 Sum_probs=30.8
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCC---------cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003184 240 KALVKHLQKELARLESELRSPAPASS---------TCDYVALLRKKDLQIQKMEREIRELTKQRDLAQSRVEDLLR 306 (841)
Q Consensus 240 ~alik~Lq~EiarLe~eL~~~~~~~s---------~~~~~~~l~ekd~qi~kle~ei~eL~~qrd~~q~r~e~l~~ 306 (841)
+.-+..|+..|..|+.+|.+...... ...+...+......|..++.++.+++.+....-..+++|+.
T Consensus 35 k~Ei~elrr~iq~L~~el~~l~~~~~~LE~~l~e~e~~~~~~l~~~q~~i~~lE~eL~~~r~e~~~ql~EYq~Lln 110 (129)
T 3tnu_B 35 KHEISEMNRMIQRLRAEIDNVKKQCANLQNAIADAEQRGELALKDARNKLAELEEALQKAKQDMARLLREYQELMN 110 (129)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHH
Confidence 44566666666666666643321100 00111222333344555555555555555444444555544
Done!