Query         003185
Match_columns 840
No_of_seqs    544 out of 2197
Neff          6.2 
Searched_HMMs 29240
Date          Mon Mar 25 16:22:02 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/003185.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/003185hhsearch_pdb -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 4b9d_A Serine/threonine-protei 100.0 5.9E-53   2E-57  467.0  24.3  257  502-829    21-279 (350)
  2 3omv_A RAF proto-oncogene seri 100.0 4.1E-52 1.4E-56  453.0  30.1  269  502-836    33-303 (307)
  3 4asz_A BDNF/NT-3 growth factor 100.0 2.2E-52 7.4E-57  453.5  25.3  267  502-836    10-292 (299)
  4 4aoj_A High affinity nerve gro 100.0   6E-52 2.1E-56  455.8  28.0  267  502-836    38-322 (329)
  5 4gt4_A Tyrosine-protein kinase 100.0   1E-51 3.5E-56  450.0  27.5  264  502-832    23-305 (308)
  6 4fih_A Serine/threonine-protei 100.0 1.2E-51   4E-56  456.0  26.1  256  504-833    73-330 (346)
  7 4g3f_A NF-kappa-beta-inducing  100.0 2.7E-51 9.1E-56  451.6  22.0  258  503-832    56-315 (336)
  8 4aw0_A HPDK1, 3-phosphoinositi 100.0 4.5E-51 1.5E-55  445.2  23.0  253  502-825    29-283 (311)
  9 3hyh_A Carbon catabolite-derep 100.0 1.1E-50 3.8E-55  435.3  25.0  255  502-830    10-266 (275)
 10 4fie_A Serine/threonine-protei 100.0 1.4E-50 4.7E-55  458.1  26.1  255  504-832   150-406 (423)
 11 3fpq_A Serine/threonine-protei 100.0 8.9E-50   3E-54  431.3  25.5  256  505-830    25-286 (290)
 12 4ase_A Vascular endothelial gr 100.0 8.4E-50 2.9E-54  442.7  24.0  268  502-835    61-349 (353)
 13 3ubd_A Ribosomal protein S6 ki 100.0 1.2E-50 4.1E-55  440.8  15.6  251  505-829    24-284 (304)
 14 3hmm_A TGF-beta receptor type- 100.0   9E-49 3.1E-53  425.2  25.1  269  506-834     4-298 (303)
 15 4b99_A Mitogen-activated prote 100.0   7E-48 2.4E-52  433.8  27.0  290  505-830    54-348 (398)
 16 4g31_A Eukaryotic translation  100.0 5.6E-48 1.9E-52  418.7  22.9  274  504-829     4-282 (299)
 17 3uto_A Twitchin; kinase, muscl 100.0 7.3E-46 2.5E-50  435.5  25.8  259  503-831   155-415 (573)
 18 4f9c_A Cell division cycle 7-r 100.0 7.5E-46 2.6E-50  412.1  22.3  285  505-830    21-356 (361)
 19 3v5w_A G-protein coupled recep 100.0 2.1E-45 7.2E-50  434.6  19.0  257  502-829   186-452 (689)
 20 3p86_A Serine/threonine-protei 100.0 1.7E-43 5.8E-48  382.5  27.3  266  502-837    34-302 (309)
 21 3fe3_A MAP/microtubule affinit 100.0 5.3E-43 1.8E-47  382.9  26.4  255  502-830    12-268 (328)
 22 3fxz_A Serine/threonine-protei 100.0   7E-43 2.4E-47  374.9  25.4  256  503-832    18-275 (297)
 23 3dtc_A Mitogen-activated prote 100.0 1.2E-42 4.1E-47  364.6  24.7  263  502-831     4-271 (271)
 24 3kul_A Ephrin type-A receptor  100.0 2.1E-42 7.3E-47  376.1  27.0  268  502-839    46-319 (325)
 25 2psq_A Fibroblast growth facto 100.0 3.1E-42   1E-46  382.4  28.1  265  502-833    78-364 (370)
 26 1tki_A Titin; serine kinase, m 100.0 1.9E-42 6.6E-47  376.5  25.7  258  503-831     3-262 (321)
 27 4hcu_A Tyrosine-protein kinase 100.0 2.8E-42 9.7E-47  362.4  25.9  259  502-834     7-267 (269)
 28 2yab_A Death-associated protei 100.0 1.8E-42 6.3E-47  384.1  25.5  264  504-830    11-276 (361)
 29 3lb7_A RAF proto-oncogene seri 100.0 6.6E-42 2.3E-46  369.4  29.2  270  502-837    33-304 (307)
 30 4eqm_A Protein kinase; transfe 100.0 5.4E-42 1.8E-46  367.1  28.0  267  503-836     9-278 (294)
 31 1luf_A Muscle-specific tyrosin 100.0 5.3E-42 1.8E-46  371.9  26.8  268  502-836    44-338 (343)
 32 2bdw_A Hypothetical protein K1 100.0 5.5E-42 1.9E-46  379.5  27.3  258  504-829    28-287 (362)
 33 3l9p_A Anaplastic lymphoma kin 100.0 1.9E-42 6.7E-47  383.3  23.7  270  501-834    67-346 (367)
 34 3zgw_A Maternal embryonic leuc 100.0 3.9E-42 1.3E-46  379.7  25.6  258  502-832     7-266 (347)
 35 3kmu_A ILK, integrin-linked ki 100.0 4.6E-42 1.6E-46  358.6  24.7  261  502-833     7-270 (271)
 36 3soc_A Activin receptor type-2 100.0 5.9E-42   2E-46  371.5  25.7  270  502-833    21-318 (322)
 37 3o0g_A Cell division protein k 100.0 9.7E-42 3.3E-46  363.1  25.8  282  504-830     1-286 (292)
 38 3sxs_A Cytoplasmic tyrosine-pr 100.0 9.2E-42 3.1E-46  357.9  25.1  258  502-833     5-264 (268)
 39 3soa_A Calcium/calmodulin-depe 100.0 9.9E-42 3.4E-46  388.6  27.4  259  504-829    10-270 (444)
 40 2y0a_A Death-associated protei 100.0 1.4E-41 4.8E-46  369.9  27.3  263  505-830    11-275 (326)
 41 3c0i_A Peripheral plasma membr 100.0 1.4E-41 4.8E-46  373.9  27.6  263  505-829    24-289 (351)
 42 3niz_A Rhodanese family protei 100.0 5.7E-42 1.9E-46  370.2  23.9  284  502-830    18-304 (311)
 43 2ivs_A Proto-oncogene tyrosine 100.0 1.3E-41 4.4E-46  363.8  26.3  265  502-833    20-311 (314)
 44 3txo_A PKC-L, NPKC-ETA, protei 100.0 5.9E-42   2E-46  378.7  24.0  256  501-829    19-283 (353)
 45 3a62_A Ribosomal protein S6 ki 100.0 1.2E-41 4.1E-46  370.6  25.5  258  501-830    13-280 (327)
 46 1o6l_A RAC-beta serine/threoni 100.0 1.2E-41 4.2E-46  373.9  25.9  255  502-829     2-263 (337)
 47 3cbl_A C-FES, proto-oncogene t 100.0 5.1E-42 1.7E-46  380.9  23.0  261  502-833   111-374 (377)
 48 3kk8_A Calcium/calmodulin depe 100.0 2.8E-41 9.4E-46  356.7  27.5  262  503-832     4-267 (284)
 49 3gen_A Tyrosine-protein kinase 100.0 1.4E-41 4.9E-46  359.2  25.2  258  502-833    21-280 (283)
 50 1ob3_A PFPK5, cell division co 100.0 8.4E-42 2.9E-46  363.3  23.6  280  504-829     1-283 (288)
 51 3vhe_A Vascular endothelial gr 100.0   1E-41 3.4E-46  372.5  24.0  266  502-833    19-355 (359)
 52 3g33_A Cell division protein k 100.0 1.5E-41 5.1E-46  364.4  24.6  290  502-830     6-300 (308)
 53 3tt0_A Basic fibroblast growth 100.0 2.9E-41 9.8E-46  375.2  27.7  266  502-834    66-353 (382)
 54 2zv2_A Calcium/calmodulin-depe 100.0 6.3E-42 2.2E-46  365.6  21.5  266  502-829    10-295 (298)
 55 3t9t_A Tyrosine-protein kinase 100.0 3.9E-41 1.3E-45  351.9  26.7  259  502-834     5-265 (267)
 56 1k9a_A Carboxyl-terminal SRC k 100.0 2.2E-41 7.4E-46  385.3  26.4  256  502-834   190-446 (450)
 57 3ugc_A Tyrosine-protein kinase 100.0 1.6E-41 5.5E-46  361.4  23.7  279  502-834     7-292 (295)
 58 4euu_A Serine/threonine-protei 100.0 1.6E-41 5.5E-46  366.3  23.8  291  504-832     8-308 (319)
 59 3q4u_A Activin receptor type-1 100.0 3.5E-41 1.2E-45  358.3  25.9  268  502-831     5-300 (301)
 60 3qup_A Tyrosine-protein kinase 100.0 2.9E-41 9.9E-46  364.1  25.5  273  502-834    20-299 (323)
 61 4fvq_A Tyrosine-protein kinase 100.0 1.5E-41 5.2E-46  359.5  23.0  265  502-838     5-280 (289)
 62 4agu_A Cyclin-dependent kinase 100.0 2.2E-41 7.6E-46  362.6  24.4  281  504-829     2-287 (311)
 63 1fot_A TPK1 delta, CAMP-depend 100.0 3.9E-41 1.3E-45  366.5  26.6  252  502-829     3-261 (318)
 64 1mp8_A Focal adhesion kinase 1 100.0 3.9E-41 1.3E-45  356.4  25.9  259  502-833    12-276 (281)
 65 2c30_A Serine/threonine-protei 100.0 3.4E-41 1.2E-45  366.1  25.9  255  506-834    46-302 (321)
 66 3poz_A Epidermal growth factor 100.0 2.3E-41 7.9E-46  367.6  24.0  260  502-833    12-278 (327)
 67 3og7_A AKAP9-BRAF fusion prote 100.0 4.1E-41 1.4E-45  358.1  25.2  267  502-833    21-288 (289)
 68 2pmi_A Negative RE, cyclin-dep 100.0 5.9E-41   2E-45  362.8  26.8  285  503-830     3-297 (317)
 69 3fdn_A Serine/threonine-protei 100.0 5.7E-41 1.9E-45  354.4  25.9  256  502-832     6-263 (279)
 70 4f0f_A Serine/threonine-protei 100.0 7.7E-41 2.6E-45  354.3  26.6  265  502-831    16-287 (287)
 71 3a8x_A Protein kinase C IOTA t 100.0   6E-41 2.1E-45  369.1  26.7  258  499-829     3-278 (345)
 72 2nru_A Interleukin-1 receptor- 100.0 2.9E-41 9.9E-46  361.0  23.4  270  507-833    33-306 (307)
 73 1rdq_E PKA C-alpha, CAMP-depen 100.0 4.8E-41 1.7E-45  370.8  25.9  253  502-830    38-297 (350)
 74 3gbz_A Kinase, CMGC CDK; ssgci 100.0 2.6E-41 8.8E-46  367.5  23.2  289  501-832    30-324 (329)
 75 2w5a_A Serine/threonine-protei 100.0 1.8E-41 6.3E-46  357.1  21.3  265  502-833     3-274 (279)
 76 3ork_A Serine/threonine protei 100.0 3.8E-41 1.3E-45  362.5  24.2  268  502-831     9-279 (311)
 77 1qcf_A Haematopoetic cell kina 100.0 4.2E-41 1.4E-45  383.1  25.5  261  502-836   185-447 (454)
 78 3cc6_A Protein tyrosine kinase 100.0 5.4E-41 1.8E-45  354.9  24.5  259  502-833     9-273 (281)
 79 3s95_A LIMK-1, LIM domain kina 100.0 1.3E-40 4.4E-45  357.4  27.8  269  503-833     8-282 (310)
 80 3tki_A Serine/threonine-protei 100.0   2E-41 6.8E-46  368.5  21.7  260  502-831     4-266 (323)
 81 3ttj_A Mitogen-activated prote 100.0 6.3E-41 2.2E-45  383.6  26.7  282  503-829    60-358 (464)
 82 3is5_A Calcium-dependent prote 100.0 6.1E-41 2.1E-45  356.6  24.7  261  502-829    19-281 (285)
 83 2a2a_A Death-associated protei 100.0 1.3E-40 4.4E-45  360.0  27.5  263  504-829    11-275 (321)
 84 1rjb_A FL cytokine receptor; k 100.0 5.1E-41 1.7E-45  365.3  24.5  267  502-835    42-336 (344)
 85 3kex_A Receptor tyrosine-prote 100.0 3.3E-41 1.1E-45  365.7  22.9  260  502-833    10-276 (325)
 86 1ua2_A CAK, cell division prot 100.0 3.1E-41 1.1E-45  369.4  22.8  290  502-833     7-298 (346)
 87 1kob_A Twitchin; kinase, intra 100.0 4.7E-41 1.6E-45  376.3  24.6  258  503-830    49-308 (387)
 88 3oz6_A Mitogen-activated prote 100.0 7.2E-41 2.5E-45  372.1  25.9  293  502-829     6-331 (388)
 89 1u59_A Tyrosine-protein kinase 100.0 1.2E-40 4.2E-45  353.7  26.6  261  503-834     7-273 (287)
 90 1fvr_A Tyrosine-protein kinase 100.0   7E-41 2.4E-45  362.6  25.1  268  498-835    18-302 (327)
 91 3f3z_A Calcium/calmodulin-depe 100.0 1.5E-40 5.1E-45  350.3  26.9  256  504-830     8-265 (277)
 92 2eva_A TAK1 kinase - TAB1 chim 100.0   9E-41 3.1E-45  359.8  25.8  255  502-834     5-264 (307)
 93 1p4o_A Insulin-like growth fac 100.0 1.2E-40 4.1E-45  358.6  26.7  266  502-834    22-300 (322)
 94 3llt_A Serine/threonine kinase 100.0 1.3E-40 4.5E-45  364.7  27.5  283  503-829    33-358 (360)
 95 2y7j_A Phosphorylase B kinase  100.0 1.9E-40 6.6E-45  367.0  28.9  265  504-829    93-362 (365)
 96 3hko_A Calcium/calmodulin-depe 100.0   5E-41 1.7E-45  365.0  23.6  271  505-830    26-334 (345)
 97 3brb_A Proto-oncogene tyrosine 100.0 9.2E-41 3.1E-45  358.6  25.4  272  502-834    31-309 (313)
 98 1t46_A HOMO sapiens V-KIT hard 100.0 1.1E-40 3.7E-45  356.5  25.7  268  502-836    20-310 (313)
 99 3kfa_A Tyrosine-protein kinase 100.0 9.2E-41 3.1E-45  353.4  24.7  259  502-833    10-271 (288)
100 2qr7_A Ribosomal protein S6 ki 100.0 4.1E-41 1.4E-45  370.0  22.8  257  503-831    20-282 (342)
101 2eue_A Carbon catabolite derep 100.0 5.2E-41 1.8E-45  353.9  22.7  255  502-830    10-266 (275)
102 2qol_A Ephrin receptor; recept 100.0 3.9E-41 1.3E-45  374.2  22.9  263  502-834    42-310 (373)
103 3bhy_A Death-associated protei 100.0 1.5E-40 5.2E-45  350.9  26.3  261  505-828     5-267 (283)
104 2x4f_A Myosin light chain kina 100.0   1E-40 3.5E-45  371.0  26.1  253  507-829    91-345 (373)
105 1xjd_A Protein kinase C, theta 100.0 4.4E-41 1.5E-45  370.8  22.7  255  502-829    14-272 (345)
106 1xbb_A Tyrosine-protein kinase 100.0 1.6E-40 5.4E-45  353.6  26.0  261  502-833    13-279 (291)
107 1opk_A P150, C-ABL, proto-onco 100.0 8.4E-41 2.9E-45  385.2  25.8  261  502-835   217-480 (495)
108 4e5w_A Tyrosine-protein kinase 100.0 2.3E-40 7.9E-45  352.7  27.2  275  504-832    20-301 (302)
109 2izr_A Casein kinase I isoform 100.0 2.5E-40 8.6E-45  359.1  27.8  267  504-832     8-280 (330)
110 3gni_B Strad alpha; kinase fol 100.0 8.2E-41 2.8E-45  371.4  24.5  293  502-829    22-336 (389)
111 3h4j_B AMPK kdaid, SNF1-like p 100.0 1.2E-41 3.9E-46  374.2  17.3  256  502-831     6-263 (336)
112 1byg_A CSK, protein (C-termina 100.0 4.8E-41 1.7E-45  354.7  21.3  255  502-833    18-273 (278)
113 4dc2_A Protein kinase C IOTA t 100.0 6.6E-41 2.3E-45  376.7  23.7  255  502-829    49-321 (396)
114 1cm8_A Phosphorylated MAP kina 100.0 1.4E-40 4.9E-45  368.6  26.1  282  504-829    24-310 (367)
115 1mqb_A Ephrin type-A receptor  100.0 2.8E-40 9.7E-45  360.2  28.0  263  502-834    41-310 (333)
116 3q5i_A Protein kinase; CDPK, m 100.0   2E-40 6.9E-45  382.0  28.3  266  503-831    34-306 (504)
117 3lij_A Calcium/calmodulin depe 100.0 1.3E-40 4.6E-45  382.6  26.8  256  505-829    37-294 (494)
118 2i0e_A Protein kinase C-beta I 100.0 1.2E-40 4.2E-45  368.4  25.4  255  502-829    17-279 (353)
119 3mtl_A Cell division protein k 100.0   3E-41   1E-45  366.2  20.1  282  504-831     1-286 (324)
120 3lzb_A Epidermal growth factor 100.0 1.2E-40   4E-45  362.7  24.7  260  502-833    12-278 (327)
121 2pvf_A Fibroblast growth facto 100.0 1.9E-40 6.5E-45  360.6  26.2  265  502-833    32-318 (334)
122 3qd2_B Eukaryotic translation  100.0   7E-41 2.4E-45  359.9  22.4  276  504-828     5-327 (332)
123 1csn_A Casein kinase-1; phosph 100.0 5.4E-40 1.8E-44  348.7  28.8  271  502-834     7-284 (298)
124 3uc3_A Serine/threonine-protei 100.0 1.7E-40 5.7E-45  367.2  25.8  255  502-830    17-278 (361)
125 3rp9_A Mitogen-activated prote 100.0 1.7E-40 5.9E-45  377.3  26.6  296  504-830    52-400 (458)
126 2wqm_A Serine/threonine-protei 100.0 2.4E-40 8.3E-45  354.8  26.2  271  501-838    28-302 (310)
127 4ejn_A RAC-alpha serine/threon 100.0 4.9E-41 1.7E-45  381.1  21.3  255  502-829   145-407 (446)
128 3mwu_A Calmodulin-domain prote 100.0 1.4E-40 4.7E-45  381.5  25.2  261  503-832    20-282 (486)
129 3f66_A Hepatocyte growth facto 100.0 2.3E-40 7.9E-45  352.5  25.1  265  503-835    23-293 (298)
130 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 1.7E-40 5.9E-45  378.0  25.5  260  502-835   181-442 (452)
131 4aaa_A Cyclin-dependent kinase 100.0   6E-41 2.1E-45  364.1  20.7  287  499-830    19-310 (331)
132 3v8s_A RHO-associated protein  100.0 5.3E-41 1.8E-45  379.0  21.0  265  502-832    66-335 (410)
133 3op5_A Serine/threonine-protei 100.0 1.8E-40 6.2E-45  365.8  24.8  285  503-833    33-329 (364)
134 2yfx_A Tyrosine-protein kinase 100.0 2.1E-40 7.3E-45  358.8  24.9  269  501-833    26-304 (327)
135 2w4o_A Calcium/calmodulin-depe 100.0 1.1E-40 3.6E-45  366.9  22.8  256  504-831    52-310 (349)
136 1phk_A Phosphorylase kinase; g 100.0 6.6E-40 2.2E-44  348.5  27.9  268  502-830    14-287 (298)
137 1u5q_A Serine/threonine protei 100.0 3.2E-40 1.1E-44  363.5  26.3  258  505-834    54-313 (348)
138 3mi9_A Cell division protein k 100.0 2.7E-40 9.3E-45  361.4  25.6  301  502-836    14-321 (351)
139 2rku_A Serine/threonine-protei 100.0 4.1E-40 1.4E-44  350.4  26.2  261  500-833    10-272 (294)
140 4fr4_A YANK1, serine/threonine 100.0 2.3E-40 7.9E-45  370.7  25.4  257  502-829    12-274 (384)
141 3g2f_A Bone morphogenetic prot 100.0 3.4E-40 1.2E-44  357.1  25.8  296  502-835    10-320 (336)
142 1x8b_A WEE1HU, WEE1-like prote 100.0 2.8E-40 9.5E-45  347.2  24.1  262  502-831     8-284 (289)
143 2vgo_A Serine/threonine-protei 100.0   5E-40 1.7E-44  348.0  26.2  256  502-832    11-268 (284)
144 3i6u_A CDS1, serine/threonine- 100.0 6.9E-41 2.4E-45  377.7  20.8  266  504-829   134-402 (419)
145 2qkw_B Protein kinase; three-h 100.0 3.3E-41 1.1E-45  364.2  17.4  276  502-834    36-316 (321)
146 3kn6_A Ribosomal protein S6 ki 100.0 1.8E-40   6E-45  361.4  23.3  257  504-832     7-276 (325)
147 1qpc_A LCK kinase; alpha beta  100.0   3E-40   1E-44  348.4  24.3  259  502-834    10-270 (279)
148 2xrw_A Mitogen-activated prote 100.0 8.5E-40 2.9E-44  362.0  28.8  283  503-830    23-322 (371)
149 2i1m_A Macrophage colony-stimu 100.0 3.6E-40 1.2E-44  357.0  25.1  265  502-833    43-326 (333)
150 2xir_A Vascular endothelial gr 100.0 2.3E-40 7.8E-45  354.5  23.3  267  502-834    24-311 (316)
151 3a7i_A MST3 kinase, serine/thr 100.0 2.9E-40   1E-44  353.0  24.0  256  502-832    19-276 (303)
152 3mdy_A Bone morphogenetic prot 100.0 8.7E-40   3E-44  353.1  27.8  271  503-835    35-333 (337)
153 3eb0_A Putative uncharacterize 100.0 3.3E-40 1.1E-44  366.5  25.1  293  503-829     5-324 (383)
154 3nyv_A Calmodulin-domain prote 100.0 1.4E-40 4.8E-45  380.6  22.6  261  503-831    24-286 (484)
155 2r3i_A Cell division protein k 100.0 6.9E-40 2.4E-44  348.5  25.9  283  503-831     1-288 (299)
156 3lxl_A Tyrosine-protein kinase 100.0 3.8E-40 1.3E-44  356.8  24.3  280  502-835    20-305 (327)
157 3uim_A Brassinosteroid insensi 100.0 1.9E-40 6.4E-45  358.2  21.8  275  503-833    28-311 (326)
158 3fme_A Dual specificity mitoge 100.0 3.5E-40 1.2E-44  348.8  23.4  263  502-830     4-270 (290)
159 4aw2_A Serine/threonine-protei 100.0 1.2E-40 4.1E-45  379.1  21.0  267  502-831    71-343 (437)
160 2owb_A Serine/threonine-protei 100.0 6.9E-40 2.4E-44  357.1  25.9  260  500-832    36-297 (335)
161 2y94_A 5'-AMP-activated protei 100.0 3.6E-40 1.2E-44  379.1  24.7  256  502-830    13-270 (476)
162 3qyz_A Mitogen-activated prote 100.0 1.1E-39 3.6E-44  359.7  27.3  286  505-830    27-317 (364)
163 2ycf_A Serine/threonine-protei 100.0 1.9E-40 6.5E-45  358.4  20.9  264  505-828    10-276 (322)
164 2r5t_A Serine/threonine-protei 100.0 3.2E-40 1.1E-44  367.8  23.4  254  502-828    35-295 (373)
165 2wtk_C Serine/threonine-protei 100.0 7.6E-40 2.6E-44  349.2  25.2  265  503-832     3-269 (305)
166 3c1x_A Hepatocyte growth facto 100.0 3.5E-40 1.2E-44  367.0  23.5  264  505-836    89-358 (373)
167 2i6l_A Mitogen-activated prote 100.0 1.8E-39 6.1E-44  347.1  28.0  301  504-835    10-314 (320)
168 3pls_A Macrophage-stimulating  100.0 1.7E-39 5.8E-44  344.9  27.5  261  506-834    22-288 (298)
169 1j1b_A Glycogen synthase kinas 100.0 5.7E-40 1.9E-44  370.4  25.3  285  504-830    53-340 (420)
170 3dbq_A Dual specificity protei 100.0 6.7E-40 2.3E-44  358.4  25.1  260  504-832     8-279 (343)
171 2h6d_A 5'-AMP-activated protei 100.0 7.9E-40 2.7E-44  344.1  24.4  256  502-830     8-265 (276)
172 3cok_A Serine/threonine-protei 100.0 1.8E-40   6E-45  350.0  19.5  258  502-831     8-267 (278)
173 3n9x_A Phosphotransferase; mal 100.0 1.2E-39   4E-44  368.9  27.1  297  503-830    24-365 (432)
174 3lxp_A Non-receptor tyrosine-p 100.0 9.1E-40 3.1E-44  353.3  25.0  259  505-833    30-310 (318)
175 2ac3_A MAP kinase-interacting  100.0 1.3E-39 4.3E-44  349.7  25.9  272  502-831     9-300 (316)
176 1t4h_A Serine/threonine-protei 100.0 1.7E-39 5.6E-44  345.1  26.2  255  504-829    25-285 (290)
177 2jam_A Calcium/calmodulin-depe 100.0 8.6E-40 2.9E-44  350.0  24.1  257  504-831     8-266 (304)
178 2h34_A Serine/threonine-protei 100.0 6.3E-40 2.1E-44  353.1  23.1  266  502-836    31-299 (309)
179 1u46_A ACK-1, activated CDC42  100.0 5.6E-40 1.9E-44  347.4  22.2  265  502-835    15-286 (291)
180 2b9h_A MAP kinase FUS3, mitoge 100.0 3.6E-39 1.2E-43  351.5  29.0  297  502-831     8-310 (353)
181 2h8h_A Proto-oncogene tyrosine 100.0   6E-40 2.1E-44  381.8  24.4  260  502-835   264-525 (535)
182 3an0_A Dual specificity mitoge 100.0 1.4E-39 4.9E-44  353.8  25.7  264  502-832    48-316 (340)
183 2fst_X Mitogen-activated prote 100.0 4.2E-40 1.4E-44  365.3  21.9  282  505-830    29-315 (367)
184 2a19_B Interferon-induced, dou 100.0 1.2E-39 4.3E-44  343.0  24.4  264  504-836    10-277 (284)
185 2vd5_A DMPK protein; serine/th 100.0   7E-40 2.4E-44  370.1  23.9  266  502-831    58-332 (412)
186 1vzo_A Ribosomal protein S6 ki 100.0 3.3E-40 1.1E-44  363.5  20.7  261  502-831    51-326 (355)
187 2y4i_B KSR2, HKSR2, kinase sup 100.0 1.4E-40 4.7E-45  357.2  17.1  270  502-835    30-304 (319)
188 1b6c_B TGF-B superfamily recep 100.0 2.3E-39 7.8E-44  351.1  26.6  269  505-835    42-338 (342)
189 2v62_A Serine/threonine-protei 100.0 4.7E-40 1.6E-44  359.8  21.4  285  502-834    34-329 (345)
190 3eqc_A Dual specificity mitoge 100.0 1.3E-39 4.3E-44  357.3  24.8  277  502-830    30-328 (360)
191 4hgt_A Casein kinase I isoform 100.0   1E-39 3.5E-44  345.7  23.2  270  503-834     7-281 (296)
192 2j7t_A Serine/threonine-protei 100.0 6.7E-40 2.3E-44  349.2  21.5  260  502-829    16-278 (302)
193 3e3p_A Protein kinase, putativ 100.0 2.4E-39 8.2E-44  353.8  26.5  290  502-830    20-318 (360)
194 3p1a_A MYT1 kinase, membrane-a 100.0 2.1E-39 7.3E-44  349.7  25.6  248  505-829    57-307 (311)
195 3com_A Serine/threonine-protei 100.0   2E-39 6.9E-44  347.8  25.2  257  502-832    26-284 (314)
196 4e7w_A Glycogen synthase kinas 100.0 1.3E-39 4.6E-44  364.1  24.6  283  504-829    39-324 (394)
197 2zmd_A Dual specificity protei 100.0   2E-39   7E-44  362.4  26.0  259  505-832    56-326 (390)
198 1nxk_A MAP kinase-activated pr 100.0 6.9E-40 2.4E-44  367.6  21.9  263  502-833    58-328 (400)
199 3pg1_A Mitogen-activated prote 100.0 2.2E-39 7.6E-44  355.3  25.2  291  503-829    20-319 (362)
200 2vwi_A Serine/threonine-protei 100.0 3.7E-40 1.3E-44  350.3  18.2  274  502-829    12-290 (303)
201 3uzp_A CKI-delta, CKID, casein 100.0 5.3E-39 1.8E-43  340.7  26.8  270  503-834     7-281 (296)
202 1blx_A Cyclin-dependent kinase 100.0 2.2E-39 7.4E-44  348.9  24.0  285  503-829     9-299 (326)
203 2x7f_A TRAF2 and NCK-interacti 100.0 2.4E-39   8E-44  349.1  24.0  267  502-831    21-291 (326)
204 3lm5_A Serine/threonine-protei 100.0   6E-40   2E-44  356.4  19.5  260  505-830    28-291 (327)
205 2wei_A Calmodulin-domain prote 100.0   2E-39 6.8E-44  344.4  23.0  258  504-830    21-280 (287)
206 2ozo_A Tyrosine-protein kinase 100.0 2.5E-39 8.5E-44  382.7  26.1  257  505-832   335-597 (613)
207 3nsz_A CK II alpha, casein kin 100.0 5.2E-39 1.8E-43  347.0  26.4  275  502-830    33-323 (330)
208 4eut_A Serine/threonine-protei 100.0   2E-39   7E-44  362.3  23.8  293  504-834     8-310 (396)
209 4fl3_A Tyrosine-protein kinase 100.0 2.6E-39 8.8E-44  384.2  25.6  252  511-833   375-631 (635)
210 2yex_A Serine/threonine-protei 100.0 8.1E-40 2.8E-44  343.6  18.9  257  504-830     6-265 (276)
211 1z57_A Dual specificity protei 100.0 7.5E-39 2.6E-43  344.5  26.6  282  502-829    11-331 (339)
212 3dls_A PAS domain-containing s 100.0 5.4E-40 1.8E-44  359.3  17.8  252  504-829    23-277 (335)
213 3gxj_A TGF-beta receptor type- 100.0 2.4E-41 8.2E-46  359.4   6.5  269  505-835     3-299 (303)
214 3pfq_A PKC-B, PKC-beta, protei 100.0 3.7E-39 1.3E-43  385.3  26.0  255  502-829   338-600 (674)
215 3kvw_A DYRK2, dual specificity 100.0 4.4E-39 1.5E-43  364.3  25.1  280  503-831    95-413 (429)
216 2buj_A Serine/threonine-protei 100.0 2.6E-39 8.9E-44  347.4  22.1  282  502-838    26-311 (317)
217 4exu_A Mitogen-activated prote 100.0 6.9E-39 2.4E-43  354.7  25.5  281  505-830    42-327 (371)
218 3ll6_A Cyclin G-associated kin 100.0 4.2E-39 1.4E-43  346.7  23.1  275  505-834    28-309 (337)
219 2jii_A Serine/threonine-protei 100.0 4.3E-39 1.5E-43  352.8  22.6  268  504-834    41-337 (352)
220 3byv_A Rhoptry kinase; malaria 100.0   3E-40   1E-44  366.1  13.6  268  503-829    71-362 (377)
221 1wak_A Serine/threonine-protei 100.0 8.6E-39 2.9E-43  352.6  25.0  286  503-829    35-394 (397)
222 2w1i_A JAK2; chromosomal rearr 100.0   1E-38 3.5E-43  345.8  25.2  278  502-833    38-322 (326)
223 2clq_A Mitogen-activated prote 100.0 9.3E-39 3.2E-43  338.7  24.1  260  503-831    20-283 (295)
224 2acx_A G protein-coupled recep 100.0 5.6E-39 1.9E-43  376.6  24.0  257  502-830   181-448 (576)
225 3rgf_A Cyclin-dependent kinase 100.0 6.8E-39 2.3E-43  358.5  22.4  292  506-834    21-341 (405)
226 3c4z_A Rhodopsin kinase; Ser/T 100.0 1.1E-38 3.7E-43  372.3  24.9  259  502-829   182-451 (543)
227 1zy4_A Serine/threonine-protei 100.0 3.2E-38 1.1E-42  334.3  25.7  274  505-829     6-286 (303)
228 2eu9_A Dual specificity protei 100.0 4.5E-38 1.5E-42  341.2  27.1  281  503-829    17-336 (355)
229 3e7e_A HBUB1, BUB1A, mitotic c 100.0 5.5E-39 1.9E-43  353.7  19.8  262  503-833    63-339 (365)
230 3coi_A Mitogen-activated prote 100.0 1.3E-38 4.5E-43  348.7  22.1  281  505-830    24-309 (353)
231 2pml_X PFPK7, Ser/Thr protein  100.0 2.8E-39 9.7E-44  351.6  16.6  280  502-829    28-325 (348)
232 2vx3_A Dual specificity tyrosi 100.0 6.9E-38 2.3E-42  347.7  27.2  280  502-830    51-376 (382)
233 2j0j_A Focal adhesion kinase 1 100.0 6.3E-38 2.2E-42  373.6  27.7  257  503-832   388-650 (656)
234 3aln_A Dual specificity mitoge 100.0   1E-38 3.6E-43  345.1  18.9  266  502-830    19-289 (327)
235 3cek_A Dual specificity protei 100.0 5.6E-38 1.9E-42  337.3  23.9  263  504-835    27-301 (313)
236 2dyl_A Dual specificity mitoge 100.0 3.9E-38 1.3E-42  337.4  22.4  260  502-829    22-286 (318)
237 3sv0_A Casein kinase I-like; t 100.0 6.8E-38 2.3E-42  360.8  25.3  269  501-832     3-277 (483)
238 3q60_A ROP5B; pseudokinase, tr 100.0 1.2E-38   4E-43  352.2  17.9  275  504-829    61-355 (371)
239 1q8y_A SR protein kinase; tran 100.0 6.1E-38 2.1E-42  343.9  22.8  288  502-831    16-338 (373)
240 3fhr_A MAP kinase-activated pr 100.0 2.4E-38 8.2E-43  345.8  18.4  265  502-832    25-293 (336)
241 2iwi_A Serine/threonine-protei 100.0 1.5E-37   5E-42  333.5  20.2  252  502-830    28-287 (312)
242 3a99_A Proto-oncogene serine/t 100.0   2E-37   7E-42  335.5  19.7  252  502-829    40-296 (320)
243 3p23_A Serine/threonine-protei 100.0 2.3E-37 7.8E-42  351.1  18.5  258  506-828    25-285 (432)
244 2rio_A Serine/threonine-protei 100.0 1.6E-36 5.4E-41  343.6  22.0  272  503-829    12-298 (434)
245 3m2w_A MAP kinase-activated pr 100.0 6.9E-36 2.4E-40  319.7  20.5  245  502-832    14-262 (299)
246 2vuw_A Serine/threonine-protei 100.0 1.6E-37 5.4E-42  337.9   7.8  274  503-829    18-334 (336)
247 3uqc_A Probable conserved tran 100.0   5E-36 1.7E-40  321.1  17.7  235  505-835    31-267 (286)
248 3qa8_A MGC80376 protein; kinas 100.0   4E-36 1.4E-40  356.9  15.1  285  501-826    10-297 (676)
249 2pzi_A Probable serine/threoni 100.0 3.9E-35 1.3E-39  350.4  21.9  244  504-831    79-326 (681)
250 3dzo_A Rhoptry kinase domain;  100.0 1.2E-35 4.1E-40  334.3  15.9  266  503-827    76-364 (413)
251 4azs_A Methyltransferase WBDD; 100.0 2.9E-29   1E-33  294.4   6.7  193  510-746   239-436 (569)
252 3en9_A Glycoprotease, O-sialog  99.9 2.7E-26 9.3E-31  267.6   8.7  201  508-749   339-539 (540)
253 1zar_A RIO2 kinase; serine kin  99.8 4.8E-21 1.7E-25  205.3  11.9  151  507-718    92-253 (282)
254 1zth_A RIO1 serine protein kin  99.8 5.9E-19   2E-23  186.2  12.5  143  507-684    49-219 (258)
255 4gyi_A RIO2 kinase; protein ki  99.6 4.1E-16 1.4E-20  174.4  11.6  149  507-684    97-265 (397)
256 3tm0_A Aminoglycoside 3'-phosp  99.2 3.7E-11 1.3E-15  125.3  11.5  140  504-682    13-212 (263)
257 1nd4_A Aminoglycoside 3'-phosp  99.0 1.2E-09 4.2E-14  112.4  10.1  135  503-682    18-213 (264)
258 3dxp_A Putative acyl-COA dehyd  98.9 1.5E-09 5.1E-14  118.9  10.1  147  508-684    41-249 (359)
259 3sg8_A APH(2'')-ID; antibiotic  98.8 2.1E-09 7.1E-14  115.1   6.1  196  511-748    26-287 (304)
260 3r70_A Aminoglycoside phosphot  98.5 8.5E-07 2.9E-11   95.8  13.7  133  508-685    40-239 (320)
261 3tdw_A Gentamicin resistance p  98.2 1.2E-05   4E-10   86.5  15.0  139  510-684    24-225 (306)
262 4gkh_A Aminoglycoside 3'-phosp  98.1 3.5E-05 1.2E-09   80.1  15.0  136  505-682    25-222 (272)
263 3ovc_A Hygromycin-B 4-O-kinase  98.0 2.4E-05 8.2E-10   86.4  12.3   77  507-609    43-121 (362)
264 3ats_A Putative uncharacterize  97.8 3.5E-05 1.2E-09   83.7   9.3   84  508-609    23-120 (357)
265 3d1u_A Putative fructosamine-3  97.8 0.00027 9.2E-09   75.6  15.2   76  508-609    18-97  (288)
266 2olc_A MTR kinase, methylthior  97.7 0.00017 5.8E-09   79.8  11.7   82  509-607    34-120 (397)
267 2q83_A YTAA protein; 2635576,   97.6 0.00072 2.4E-08   72.1  15.8   30  646-682   222-251 (346)
268 3dxq_A Choline/ethanolamine ki  97.3  0.0016 5.5E-08   69.2  12.4   71  510-609    23-95  (301)
269 2pyw_A Uncharacterized protein  97.2  0.0017 5.9E-08   72.5  12.6   81  644-744   230-312 (420)
270 3csv_A Aminoglycoside phosphot  96.9  0.0046 1.6E-07   66.4  11.8   36  646-684   183-218 (333)
271 3jr1_A Putative fructosamine-3  96.9  0.0036 1.2E-07   67.7  10.9   76  509-609    40-118 (312)
272 2ppq_A HSK, HK, homoserine kin  96.7  0.0077 2.6E-07   64.1  11.4  151  507-682    24-216 (322)
273 3f7w_A Putative fructosamine-3  96.6   0.023 7.9E-07   59.7  14.5   76  507-608    17-96  (288)
274 3c5i_A Choline kinase; choline  96.3  0.0085 2.9E-07   65.4   8.7   72  510-608    38-120 (369)
275 2yle_A Protein spire homolog 1  96.1   0.052 1.8E-06   56.0  12.9  101  608-747    34-135 (229)
276 2qg7_A Ethanolamine kinase PV0  96.1   0.055 1.9E-06   61.6  14.3   72  510-608   113-187 (458)
277 1nw1_A Choline kinase (49.2 KD  95.9   0.036 1.2E-06   62.4  11.6   71  509-607    77-157 (429)
278 3feg_A Choline/ethanolamine ki  95.5   0.034 1.2E-06   61.8   9.4  144  510-683    55-254 (379)
279 1zyl_A Hypothetical protein YI  95.4   0.067 2.3E-06   56.8  11.2   79  511-608    32-113 (328)
280 3i1a_A Spectinomycin phosphotr  94.5    0.15 5.1E-06   55.2  10.8   32  646-684   206-237 (339)
281 3f2s_A CK, chetk-alpha, cholin  94.2    0.19 6.3E-06   56.3  11.0   36  647-683   245-280 (401)
282 3mes_A Choline kinase; malaria  93.1    0.66 2.3E-05   52.2  13.1   73  509-608    74-156 (424)
283 3g15_A CK, chetk-alpha, cholin  87.5     1.9 6.5E-05   47.6  10.1   35  648-683   246-280 (401)
284 2f4m_A Peptide N-glycanase; gl  80.1    0.23 7.9E-06   53.1  -1.4   51  403-460   139-189 (295)
285 3isr_A Transglutaminase-like e  76.2    0.29 9.9E-06   52.4  -2.1   46  403-452   177-226 (293)
286 3cxl_A N-chimerin; SH2, RHO-GA  70.3    0.36 1.2E-05   54.9  -3.3   64  508-580   145-216 (463)
287 1x3z_A Peptide: N-glycanase; h  54.2     1.7 5.9E-05   47.1  -1.5   52  403-461   180-231 (335)
288 2q3z_A Transglutaminase 2; tra  49.4     2.1 7.3E-05   50.7  -1.9   31  402-434   272-302 (687)
289 4ann_A ESSB; membrane protein,  38.3      42  0.0014   34.1   5.9   51  622-681    76-126 (215)
290 4ano_A ESSB; membrane protein,  33.9      43  0.0015   34.1   5.2   50  623-681    81-131 (219)
291 1cja_A Protein (actin-fragmin   32.2 1.7E+02  0.0057   31.8   9.7  158  497-683    58-237 (342)
292 1vjj_A Protein-glutamine gluta  24.8     8.1 0.00028   45.8  -2.3   31  402-434   267-297 (692)
293 3oja_A Leucine-rich immune mol  23.6     6.7 0.00023   44.3  -3.4   27  554-580   325-351 (487)
294 1g0d_A Protein-glutamine gamma  22.1      12  0.0004   44.4  -1.7   32  402-435   267-298 (695)

No 1  
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00  E-value=5.9e-53  Score=467.01  Aligned_cols=257  Identities=25%  Similarity=0.343  Sum_probs=213.0

Q ss_pred             CCCCCceeeeeecccCceEEEEEEE--CCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeEEec
Q 003185          502 GSFPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKIS  579 (840)
Q Consensus       502 ~~~~~y~i~~~LG~G~fG~Vy~a~~--~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~l~g~~~~  579 (840)
                      ..+++|++++.||+|+||.||+|++  .++.||+|++....  ......+    .+.+|+.+|++|+|||||++++++.+
T Consensus        21 ~sme~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~--~~~~~~~----~~~~E~~il~~l~HpnIV~~~~~~~~   94 (350)
T 4b9d_A           21 QSMEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISR--MSSKERE----ESRREVAVLANMKHPNIVQYRESFEE   94 (350)
T ss_dssp             SCCCCEEEEEEC------CEEEEEETTTCCEEEEEEEECTT--SCHHHHH----HHHHHHHHHHHCCCTTBCCEEEEEEE
T ss_pred             CcccceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHH--CCHHHHH----HHHHHHHHHHHCCCCCCCcEEEEEEE
Confidence            5688999999999999999999997  57899999975442  2333333    45999999999999999999999987


Q ss_pred             CCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCCCcEE
Q 003185          580 SKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENIL  659 (840)
Q Consensus       580 ~~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKPeNIL  659 (840)
                      ...              +|||||||+||+|.++|..   .....+++..++.|+.||+.||+|||++|||||||||+|||
T Consensus        95 ~~~--------------~yiVmEy~~gg~L~~~i~~---~~~~~~~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NIL  157 (350)
T 4b9d_A           95 NGS--------------LYIVMDYCEGGDLFKRINA---QKGVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIF  157 (350)
T ss_dssp             TTE--------------EEEEEECCTTCBHHHHHHH---TTTCCCCHHHHHHHHHHHHHHHHHHHHTTCEETTCCGGGEE
T ss_pred             CCE--------------EEEEEeCCCCCcHHHHHHH---cCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEE
Confidence            654              5999999999999999975   23356799999999999999999999999999999999999


Q ss_pred             EecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHHHHHH
Q 003185          660 IDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLL  739 (840)
Q Consensus       660 Ld~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLGvIL~  739 (840)
                      |+.+       +.+||+|||+|+.+......          ....+||+.|||||++.+    ..|+.++|||||||+||
T Consensus       158 l~~~-------g~vKl~DFGla~~~~~~~~~----------~~~~~GT~~YmAPE~l~~----~~y~~~~DiwSlGvily  216 (350)
T 4b9d_A          158 LTKD-------GTVQLGDFGIARVLNSTVEL----------ARACIGTPYYLSPEICEN----KPYNNKSDIWALGCVLY  216 (350)
T ss_dssp             ECTT-------CCEEECSTTEESCCCHHHHH----------HHHHHSCCTTCCHHHHTT----CCCCHHHHHHHHHHHHH
T ss_pred             ECCC-------CCEEEcccccceeecCCccc----------ccccCCCccccCHHHHCC----CCCCcHHHHHHHHHHHH
Confidence            9877       46999999999876543211          123579999999999986    67899999999999999


Q ss_pred             HHHhCCCCCCCCCHHHHHHHHHcCCCCCcchHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC
Q 003185          740 ELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP  819 (840)
Q Consensus       740 ELLTG~~PF~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L~dLI~rCL~~DP~eRP  819 (840)
                      ||+||+.||.+.+..+++..|..+..+.++.                           ..++++.+||.+||+.||.+||
T Consensus       217 emltG~~PF~~~~~~~~~~~i~~~~~~~~~~---------------------------~~s~~~~~li~~~L~~dP~~R~  269 (350)
T 4b9d_A          217 ELCTLKHAFEAGSMKNLVLKIISGSFPPVSL---------------------------HYSYDLRSLVSQLFKRNPRDRP  269 (350)
T ss_dssp             HHHHSSCSCCCSSHHHHHHHHHHTCCCCCCT---------------------------TSCHHHHHHHHHHTCSSGGGSC
T ss_pred             HHHHCCCCCCCcCHHHHHHHHHcCCCCCCCc---------------------------cCCHHHHHHHHHHccCChhHCc
Confidence            9999999999999999999888876554432                           1245799999999999999999


Q ss_pred             CHHHHHHHHH
Q 003185          820 TAGDLYEMFV  829 (840)
Q Consensus       820 Sa~ELLehLe  829 (840)
                      |++|+++|.+
T Consensus       270 s~~e~l~hp~  279 (350)
T 4b9d_A          270 SVNSILEKGF  279 (350)
T ss_dssp             CHHHHHTSHH
T ss_pred             CHHHHhcCHH
Confidence            9999999843


No 2  
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00  E-value=4.1e-52  Score=452.98  Aligned_cols=269  Identities=25%  Similarity=0.369  Sum_probs=212.5

Q ss_pred             CCCCCceeeeeecccCceEEEEEEECCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeEEecCC
Q 003185          502 GSFPSLSSCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK  581 (840)
Q Consensus       502 ~~~~~y~i~~~LG~G~fG~Vy~a~~~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~l~g~~~~~~  581 (840)
                      ++.++|++.++||+|+||+||+|++.+ .||||+++  .........+.|    .+|+.+|++|+|||||+++|++... 
T Consensus        33 i~~~~l~l~~~iG~G~fG~Vy~~~~~~-~vAvK~~~--~~~~~~~~~~~f----~~E~~il~~l~HpNIV~l~g~~~~~-  104 (307)
T 3omv_A           33 IEASEVMLSTRIGSGSFGTVYKGKWHG-DVAVKILK--VVDPTPEQFQAF----RNEVAVLRKTRHVNILLFMGYMTKD-  104 (307)
T ss_dssp             CCTTSCCEEEECCCCSSSEEEEEESSS-EEEEEECC--CSSCCHHHHHHH----HHHHHHHTTCCCTTBCCEEEEECSS-
T ss_pred             EcHHHeEEeeEEeeCCCcEEEEEEECC-cEEEEEEE--ecCCCHHHHHHH----HHHHHHHHhCCCCCEeeEEEEEECC-
Confidence            567889999999999999999999865 58999854  333444444444    9999999999999999999987532 


Q ss_pred             CCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCCCcEEEe
Q 003185          582 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID  661 (840)
Q Consensus       582 ~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKPeNILLd  661 (840)
                      .              +|||||||+||+|.++|..    ....+++..++.|+.||+.||+|||+++||||||||+||||+
T Consensus       105 ~--------------~~iVmEy~~gGsL~~~l~~----~~~~l~~~~~~~i~~qia~gL~yLH~~~IiHRDlKp~NILl~  166 (307)
T 3omv_A          105 N--------------LAIVTQWCEGSSLYKHLHV----QETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLH  166 (307)
T ss_dssp             S--------------CEEEEECCSSCBHHHHHHT----SCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCSSSEEEE
T ss_pred             e--------------EEEEEEcCCCCCHHHHHhh----cCCCCCHHHHHHHHHHHHHHHHHHHHCCccCCccCHHHEEEC
Confidence            2              4999999999999999975    235699999999999999999999999999999999999999


Q ss_pred             cccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHHHHHHHH
Q 003185          662 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL  741 (840)
Q Consensus       662 ~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLGvIL~EL  741 (840)
                      .+       +.+||+|||+|+........        ......+||+.|||||++.+.. ...|+.++|||||||+||||
T Consensus       167 ~~-------~~~Ki~DFGla~~~~~~~~~--------~~~~~~~GT~~ymAPE~l~~~~-~~~y~~ksDVwS~Gvvl~El  230 (307)
T 3omv_A          167 EG-------LTVKIGDFGLATVKSRWSGS--------QQVEQPTGSVLWMAPEVIRMQD-NNPFSFQSDVYSYGIVLYEL  230 (307)
T ss_dssp             TT-------EEEEECCCSSCBC--------------------CCCCTTSCCHHHHHCCS-SCCCCHHHHHHHHHHHHHHH
T ss_pred             CC-------CcEEEeeccCceecccCCcc--------eeecccccCCCccCHHHhhccC-CCCCCcHHHhHhHHHHHHHH
Confidence            77       56999999999866432211        1123457999999999997522 24689999999999999999


Q ss_pred             HhCCCCCCCCCHHH-HHHHHHcCCC-CCcchHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC
Q 003185          742 LTLQVPYMGLSELE-IHDLIQMGKR-PRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP  819 (840)
Q Consensus       742 LTG~~PF~~~~~~e-l~~~I~~~~~-p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L~dLI~rCL~~DP~eRP  819 (840)
                      +||+.||.+.+... +...+..+.. |.++.                        ....+++.+.+||.+||+.||.+||
T Consensus       231 ltg~~Pf~~~~~~~~~~~~~~~~~~~p~~~~------------------------~~~~~~~~l~~li~~cl~~dP~~RP  286 (307)
T 3omv_A          231 MTGELPYSHINNRDQIIFMVGRGYASPDLSK------------------------LYKNCPKAMKRLVADCVKKVKEERP  286 (307)
T ss_dssp             HHSSCTTTTCCCHHHHHHHHHTTCCCCCSTT------------------------SCTTSCHHHHHHHHHHTCSSSTTSC
T ss_pred             HHCCCCCCCCChHHHHHHHHhcCCCCCCccc------------------------ccccchHHHHHHHHHHcCCCHhHCc
Confidence            99999998876544 4444544432 22221                        1123456899999999999999999


Q ss_pred             CHHHHHHHHHhhcCCCC
Q 003185          820 TAGDLYEMFVARTSSSI  836 (840)
Q Consensus       820 Sa~ELLehLe~l~~~~~  836 (840)
                      |+.||+++|+.+..+-+
T Consensus       287 s~~ei~~~Le~l~~~lp  303 (307)
T 3omv_A          287 LFPQILSSIELLQHSLP  303 (307)
T ss_dssp             CHHHHHHHHHHHHTTCC
T ss_pred             CHHHHHHHHHHHhccCC
Confidence            99999999999876644


No 3  
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00  E-value=2.2e-52  Score=453.55  Aligned_cols=267  Identities=23%  Similarity=0.322  Sum_probs=221.0

Q ss_pred             CCCCCceeeeeecccCceEEEEEEEC-------CeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceee
Q 003185          502 GSFPSLSSCDEAGKSVSSSLFRCKFG-------SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMY  574 (840)
Q Consensus       502 ~~~~~y~i~~~LG~G~fG~Vy~a~~~-------~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~l~  574 (840)
                      +.-++|.+.++||+|+||.||+|++.       +..||||+...    ......+    .|.+|+.+|++|+|||||+++
T Consensus        10 I~r~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~----~~~~~~~----~f~~E~~il~~l~HpnIV~l~   81 (299)
T 4asz_A           10 IKRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKD----ASDNARK----DFHREAELLTNLQHEHIVKFY   81 (299)
T ss_dssp             CCGGGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECS----CCHHHHH----HHHHHHHHHTTCCCTTBCCEE
T ss_pred             cCHHHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCC----CChHHHH----HHHHHHHHHHhCCCCCCccEE
Confidence            45578999999999999999999863       56789998542    1233333    459999999999999999999


Q ss_pred             eEEecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHh--------ccCCCCCCHHHHHHHHHHHHHHHHHHHhC
Q 003185          575 GHKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLS--------ETGEKHVSVKLALFIAQDVAAALVELHSK  646 (840)
Q Consensus       575 g~~~~~~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~--------~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~  646 (840)
                      |++.+.+.              .|||||||++|+|.++|....        ......+++..++.|+.||+.||+|||++
T Consensus        82 g~~~~~~~--------------~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~  147 (299)
T 4asz_A           82 GVCVEGDP--------------LIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQ  147 (299)
T ss_dssp             EEECSSSS--------------EEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEEeeCCE--------------EEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            99986654              499999999999999998631        12235799999999999999999999999


Q ss_pred             CeecccCCCCcEEEecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCC
Q 003185          647 HIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYG  726 (840)
Q Consensus       647 gIVHRDLKPeNILLd~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s  726 (840)
                      +||||||||+||||+.+       +++||+|||+|+..........        .....||+.|||||++.+    ..|+
T Consensus       148 ~iiHRDlKp~NILl~~~-------~~~Ki~DFGla~~~~~~~~~~~--------~~~~~gt~~ymAPE~~~~----~~~~  208 (299)
T 4asz_A          148 HFVHRDLATRNCLVGEN-------LLVKIGDFGMSRDVYSTDYYRV--------GGHTMLPIRWMPPESIMY----RKFT  208 (299)
T ss_dssp             TCCCSCCSGGGEEECGG-------GCEEECCCSCHHHHTGGGCEEE--------TTTEEECGGGCCHHHHHH----CCCC
T ss_pred             CcccCccCHhhEEECCC-------CcEEECCcccceecCCCCceee--------cCceecChhhcCHHHHcC----CCCC
Confidence            99999999999999987       5699999999987644322110        123468999999999987    6799


Q ss_pred             chhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHcCCCCCcchHHhhhccCccccccccCCCCCCchhhhhhHHHHHH
Q 003185          727 LEVDIWSYGCLLLELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVD  805 (840)
Q Consensus       727 ~kSDVWSLGvIL~ELLT-G~~PF~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L~d  805 (840)
                      .++|||||||+||||+| |+.||.+.+..++...+..+.++..+..                           +++.+.+
T Consensus       209 ~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~i~~~~~~~~p~~---------------------------~~~~~~~  261 (299)
T 4asz_A          209 TESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQGRVLQRPRT---------------------------CPQEVYE  261 (299)
T ss_dssp             HHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHHTCCCCCCTT---------------------------CCHHHHH
T ss_pred             chhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCCCCCCcc---------------------------chHHHHH
Confidence            99999999999999999 8999999999999999988876554432                           2457999


Q ss_pred             HHHHhcccCCCCCCCHHHHHHHHHhhcCCCC
Q 003185          806 VFRRCTEENPTERPTAGDLYEMFVARTSSSI  836 (840)
Q Consensus       806 LI~rCL~~DP~eRPSa~ELLehLe~l~~~~~  836 (840)
                      ||.+||+.||.+|||+.+|++.|+.+.+.++
T Consensus       262 li~~cl~~dP~~RPs~~~i~~~L~~~~~~~p  292 (299)
T 4asz_A          262 LMLGCWQREPHMRKNIKGIHTLLQNLAKASP  292 (299)
T ss_dssp             HHHHHTCSSGGGSCCHHHHHHHHHHHHHHSC
T ss_pred             HHHHHcCCChhHCcCHHHHHHHHHHHHhcCC
Confidence            9999999999999999999999999876554


No 4  
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00  E-value=6e-52  Score=455.78  Aligned_cols=267  Identities=23%  Similarity=0.321  Sum_probs=215.6

Q ss_pred             CCCCCceeeeeecccCceEEEEEEEC-------CeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceee
Q 003185          502 GSFPSLSSCDEAGKSVSSSLFRCKFG-------SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMY  574 (840)
Q Consensus       502 ~~~~~y~i~~~LG~G~fG~Vy~a~~~-------~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~l~  574 (840)
                      +...+|.+.++||+|+||.||+|++.       +..||||+...    ......+    .|.+|+.+|++|+|||||+++
T Consensus        38 i~~~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~----~~~~~~~----~f~~E~~il~~l~HpnIV~l~  109 (329)
T 4aoj_A           38 IKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKE----ASESARQ----DFQREAELLTMLQHQHIVRFF  109 (329)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESC----CSHHHHH----HHHHHHHHHTTCCCTTBCCEE
T ss_pred             cCHHHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECc----CCHHHHH----HHHHHHHHHHhCCCCCCCcEE
Confidence            44567899999999999999999873       56799998642    2233333    459999999999999999999


Q ss_pred             eEEecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhc----------cCCCCCCHHHHHHHHHHHHHHHHHHH
Q 003185          575 GHKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSE----------TGEKHVSVKLALFIAQDVAAALVELH  644 (840)
Q Consensus       575 g~~~~~~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~----------~~~~~ls~~~~~~Ia~QIa~AL~yLH  644 (840)
                      |++.+...              +|||||||++|+|.++|+....          .....+++..++.|+.||+.||+|||
T Consensus       110 g~~~~~~~--------------~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH  175 (329)
T 4aoj_A          110 GVCTEGRP--------------LLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLA  175 (329)
T ss_dssp             EEECSSSS--------------EEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEECCE--------------EEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHh
Confidence            99986654              4999999999999999975221          11246999999999999999999999


Q ss_pred             hCCeecccCCCCcEEEecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCC
Q 003185          645 SKHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNL  724 (840)
Q Consensus       645 s~gIVHRDLKPeNILLd~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~  724 (840)
                      +++||||||||+||||+.+       +.+||+|||+|+.+......        .......||+.|||||++.+    ..
T Consensus       176 ~~~iiHRDLKp~NILl~~~-------~~~Ki~DFGla~~~~~~~~~--------~~~~~~~gt~~ymAPE~~~~----~~  236 (329)
T 4aoj_A          176 GLHFVHRDLATRNCLVGQG-------LVVKIGDFGMSRDIYSTDYY--------RVGGRTMLPIRWMPPESILY----RK  236 (329)
T ss_dssp             HTTCCCSCCCGGGEEEETT-------TEEEECCCC------------------------CCCCGGGCCHHHHTT----CC
T ss_pred             cCCeecccccHhhEEECCC-------CcEEEcccccceeccCCCcc--------eecCcccccccccChhhhcC----CC
Confidence            9999999999999999977       57999999999876432211        11233569999999999986    77


Q ss_pred             CCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHcCCCCCcchHHhhhccCccccccccCCCCCCchhhhhhHHHH
Q 003185          725 YGLEVDIWSYGCLLLELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFL  803 (840)
Q Consensus       725 ~s~kSDVWSLGvIL~ELLT-G~~PF~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L  803 (840)
                      ++.++|||||||+||||+| |+.||.+.+..++...+..+.++..+..                           +++.+
T Consensus       237 ~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~i~~g~~~~~p~~---------------------------~~~~~  289 (329)
T 4aoj_A          237 FTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGRELERPRA---------------------------CPPEV  289 (329)
T ss_dssp             CCHHHHHHHHHHHHHHHHTTSCCTTCSSCHHHHHHHHHHTCCCCCCTT---------------------------CCHHH
T ss_pred             CCccccccchHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCCCCCccc---------------------------ccHHH
Confidence            8999999999999999999 8999999999999999888766555432                           24579


Q ss_pred             HHHHHHhcccCCCCCCCHHHHHHHHHhhcCCCC
Q 003185          804 VDVFRRCTEENPTERPTAGDLYEMFVARTSSSI  836 (840)
Q Consensus       804 ~dLI~rCL~~DP~eRPSa~ELLehLe~l~~~~~  836 (840)
                      .+||.+||+.||.+|||+.||+++|+.+.+..+
T Consensus       290 ~~li~~cl~~dP~~RPs~~ei~~~L~~l~~~pp  322 (329)
T 4aoj_A          290 YAIMRGCWQREPQQRHSIKDVHARLQALAQAPP  322 (329)
T ss_dssp             HHHHHHHCCSSTTTSCCHHHHHHHHHHHHHSCC
T ss_pred             HHHHHHHcCcChhHCcCHHHHHHHHHHHhhCCc
Confidence            999999999999999999999999999987654


No 5  
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00  E-value=1e-51  Score=450.00  Aligned_cols=264  Identities=20%  Similarity=0.317  Sum_probs=218.9

Q ss_pred             CCCCCceeeeeecccCceEEEEEEE-------CCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceee
Q 003185          502 GSFPSLSSCDEAGKSVSSSLFRCKF-------GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMY  574 (840)
Q Consensus       502 ~~~~~y~i~~~LG~G~fG~Vy~a~~-------~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~l~  574 (840)
                      +++.++++.++||+|+||.||+|.+       .+..||||+....  . .....    +.|.+|+.+|++|+|||||+++
T Consensus        23 i~~~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~--~-~~~~~----~~f~~E~~il~~l~HpNIV~l~   95 (308)
T 4gt4_A           23 ISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDK--A-EGPLR----EEFRHEAMLRARLQHPNVVCLL   95 (308)
T ss_dssp             CCGGGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC---C-CC-CH----HHHHHHHHHHHHCCCTTBCCEE
T ss_pred             CCHHHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcc--c-ChHHH----HHHHHHHHHHHhCCCCCCCCcc
Confidence            6678899999999999999999987       3467899985322  1 11222    3459999999999999999999


Q ss_pred             eEEecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhcc-----------CCCCCCHHHHHHHHHHHHHHHHHH
Q 003185          575 GHKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSET-----------GEKHVSVKLALFIAQDVAAALVEL  643 (840)
Q Consensus       575 g~~~~~~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~-----------~~~~ls~~~~~~Ia~QIa~AL~yL  643 (840)
                      |++.....+              +||||||++|+|.++|......           ....+++..++.|+.||+.||+||
T Consensus        96 g~~~~~~~~--------------~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yL  161 (308)
T 4gt4_A           96 GVVTKDQPL--------------SMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYL  161 (308)
T ss_dssp             EEECSSSSC--------------EEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHH
T ss_pred             eEEEECCEE--------------EEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHH
Confidence            999876644              9999999999999999752111           124689999999999999999999


Q ss_pred             HhCCeecccCCCCcEEEecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCC
Q 003185          644 HSKHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPN  723 (840)
Q Consensus       644 Hs~gIVHRDLKPeNILLd~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~  723 (840)
                      |+++||||||||+||||+.+       +++||+|||+|+.+......        .......||+.|||||++.+    .
T Consensus       162 H~~~iiHRDLK~~NILl~~~-------~~~Ki~DFGlar~~~~~~~~--------~~~~~~~gt~~ymAPE~l~~----~  222 (308)
T 4gt4_A          162 SSHHVVHKDLATRNVLVYDK-------LNVKISDLGLFREVYAADYY--------KLLGNSLLPIRWMAPEAIMY----G  222 (308)
T ss_dssp             HHTTCCCSCCSGGGEEECGG-------GCEEECCSCCBCGGGGGGCB--------CSSSSSCBCGGGCCHHHHHH----C
T ss_pred             HhCCCCCCCccccceEECCC-------CCEEECCcccceeccCCCce--------eEecccccCCcccCHHHHhC----C
Confidence            99999999999999999987       56999999999876543211        11234579999999999987    6


Q ss_pred             CCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHcCCCCCcchHHhhhccCccccccccCCCCCCchhhhhhHHH
Q 003185          724 LYGLEVDIWSYGCLLLELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSF  802 (840)
Q Consensus       724 ~~s~kSDVWSLGvIL~ELLT-G~~PF~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~  802 (840)
                      .++.++|||||||+||||+| |..||.+.+..++...+..+.+++.++.                           ++..
T Consensus       223 ~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~~~~~~i~~~~~~~~p~~---------------------------~~~~  275 (308)
T 4gt4_A          223 KFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIRNRQVLPCPDD---------------------------CPAW  275 (308)
T ss_dssp             CCCHHHHHHHHHHHHHHHHTTTCCTTTTCCHHHHHHHHHTTCCCCCCTT---------------------------CCHH
T ss_pred             CCCccchhhhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCccc---------------------------chHH
Confidence            79999999999999999999 8999999999999999988766554422                           3557


Q ss_pred             HHHHHHHhcccCCCCCCCHHHHHHHHHhhc
Q 003185          803 LVDVFRRCTEENPTERPTAGDLYEMFVART  832 (840)
Q Consensus       803 L~dLI~rCL~~DP~eRPSa~ELLehLe~l~  832 (840)
                      +.+|+.+||+.||.+|||+.||+++|++..
T Consensus       276 ~~~li~~C~~~dP~~RPs~~ei~~~L~a~~  305 (308)
T 4gt4_A          276 VYALMIECWNEFPSRRPRFKDIHSRLRAWG  305 (308)
T ss_dssp             HHHHHHHHTCSSGGGSCCHHHHHHHHHTSC
T ss_pred             HHHHHHHHcCCChhHCcCHHHHHHHHHhcc
Confidence            899999999999999999999999999864


No 6  
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00  E-value=1.2e-51  Score=456.01  Aligned_cols=256  Identities=26%  Similarity=0.406  Sum_probs=216.9

Q ss_pred             CCCceeeeeecccCceEEEEEEE--CCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeEEecCC
Q 003185          504 FPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK  581 (840)
Q Consensus       504 ~~~y~i~~~LG~G~fG~Vy~a~~--~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~l~g~~~~~~  581 (840)
                      -..|++.++||+|+||.||+|++  ++..||+|++......    ..+    .+.+|+.+|++|+|||||+++++|.+.+
T Consensus        73 ~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~----~~~----~~~~Ei~il~~l~HpnIV~l~~~~~~~~  144 (346)
T 4fih_A           73 RSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQ----RRE----LLFNEVVIMRDYQHENVVEMYNSYLVGD  144 (346)
T ss_dssp             GGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCS----SGG----GGHHHHHHHHHCCCTTBCCEEEEEEETT
T ss_pred             hHhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchh----HHH----HHHHHHHHHHhCCCCCCCcEEEEEEECC
Confidence            45799999999999999999998  5789999997654321    122    3489999999999999999999999766


Q ss_pred             CCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCCCcEEEe
Q 003185          582 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID  661 (840)
Q Consensus       582 ~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKPeNILLd  661 (840)
                      .              +|||||||+||+|.+++.+      ..+++..++.|+.||+.||+|||++|||||||||+||||+
T Consensus       145 ~--------------~~ivmEy~~gg~L~~~l~~------~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~  204 (346)
T 4fih_A          145 E--------------LWVVMEFLEGGALTDIVTH------TRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLT  204 (346)
T ss_dssp             E--------------EEEEECCCTTEEHHHHHHH------SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC
T ss_pred             E--------------EEEEEeCCCCCcHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEC
Confidence            4              5999999999999999976      4699999999999999999999999999999999999998


Q ss_pred             cccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHHHHHHHH
Q 003185          662 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL  741 (840)
Q Consensus       662 ~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLGvIL~EL  741 (840)
                      .+       +.+||+|||+|+.+.....          .....+||+.|||||++.+    ..|+.++|||||||+||||
T Consensus       205 ~~-------g~vKl~DFGla~~~~~~~~----------~~~~~~GTp~YmAPEvl~~----~~y~~~~DiWSlGvilyem  263 (346)
T 4fih_A          205 HD-------GRVKLSDFGFCAQVSKEVP----------RRKSLVGTPYWMAPELISR----LPYGPEVDIWSLGIMVIEM  263 (346)
T ss_dssp             TT-------CCEEECCCTTCEECCSSSC----------CBCCCCSCGGGCCHHHHTT----CCBCTHHHHHHHHHHHHHH
T ss_pred             CC-------CCEEEecCcCceecCCCCC----------cccccccCcCcCCHHHHCC----CCCCcHHHHHHHHHHHHHH
Confidence            77       4699999999987654221          1234679999999999976    6789999999999999999


Q ss_pred             HhCCCCCCCCCHHHHHHHHHcCCCCCcchHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH
Q 003185          742 LTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA  821 (840)
Q Consensus       742 LTG~~PF~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L~dLI~rCL~~DP~eRPSa  821 (840)
                      ++|++||.+.+..+++..|.....+.++.                         ....++.+.+||.+||..||.+|||+
T Consensus       264 l~G~~PF~~~~~~~~~~~i~~~~~~~~~~-------------------------~~~~s~~~~dli~~~L~~dP~~R~ta  318 (346)
T 4fih_A          264 VDGEPPYFNEPPLKAMKMIRDNLPPRLKN-------------------------LHKVSPSLKGFLDRLLVRDPAQRATA  318 (346)
T ss_dssp             HHSSCTTTTSCHHHHHHHHHHSSCCCCSC-------------------------GGGSCHHHHHHHHHHSCSSTTTSCCH
T ss_pred             HHCCCCCCCcCHHHHHHHHHcCCCCCCCc-------------------------cccCCHHHHHHHHHHcCCChhHCcCH
Confidence            99999999999999888887764433321                         12235689999999999999999999


Q ss_pred             HHHHHHHHhhcC
Q 003185          822 GDLYEMFVARTS  833 (840)
Q Consensus       822 ~ELLehLe~l~~  833 (840)
                      +|+++|.+-...
T Consensus       319 ~e~l~Hp~~~~~  330 (346)
T 4fih_A          319 AELLKHPFLAKA  330 (346)
T ss_dssp             HHHTTCGGGGGC
T ss_pred             HHHhcCHhhcCC
Confidence            999999665443


No 7  
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00  E-value=2.7e-51  Score=451.58  Aligned_cols=258  Identities=24%  Similarity=0.339  Sum_probs=210.4

Q ss_pred             CCCCceeeeeecccCceEEEEEEE--CCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeEEecC
Q 003185          503 SFPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISS  580 (840)
Q Consensus       503 ~~~~y~i~~~LG~G~fG~Vy~a~~--~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~l~g~~~~~  580 (840)
                      .++.|++.++||+|+||.||+|++  .+..||+|++..+..         .    .+|+.+|++|+|||||++++++.+.
T Consensus        56 ~~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~---------~----~~E~~il~~l~HpnIV~l~~~~~~~  122 (336)
T 4g3f_A           56 EVHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF---------R----VEELVACAGLSSPRIVPLYGAVREG  122 (336)
T ss_dssp             TTTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC---------C----THHHHTTTTCCCTTBCCEEEEEEET
T ss_pred             chhheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh---------H----HHHHHHHHhCCCCCCCcEEEEEEEC
Confidence            456799999999999999999998  478999999764321         1    5799999999999999999999876


Q ss_pred             CCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCCCcEEE
Q 003185          581 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILI  660 (840)
Q Consensus       581 ~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKPeNILL  660 (840)
                      ..              +|||||||+||+|.++|.+     ...+++..++.|+.||+.||+|||++|||||||||+||||
T Consensus       123 ~~--------------~~ivmEy~~gg~L~~~l~~-----~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl  183 (336)
T 4g3f_A          123 PW--------------VNIFMELLEGGSLGQLIKQ-----MGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLL  183 (336)
T ss_dssp             TE--------------EEEEECCCTTCBHHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCCGGGEEE
T ss_pred             CE--------------EEEEEeccCCCcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEE
Confidence            54              5999999999999999986     2569999999999999999999999999999999999999


Q ss_pred             ecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHHHHHHH
Q 003185          661 DLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLE  740 (840)
Q Consensus       661 d~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLGvIL~E  740 (840)
                      +.++      ..+||+|||+|+.+.......     .......++||+.|||||++.+    ..|+.++|||||||+|||
T Consensus       184 ~~~g------~~vKl~DFGla~~~~~~~~~~-----~~~~~~~~~GT~~YmAPE~~~~----~~y~~~~DiwSlGvilye  248 (336)
T 4g3f_A          184 SSDG------SRAALCDFGHALCLQPDGLGK-----SLLTGDYIPGTETHMAPEVVMG----KPCDAKVDIWSSCCMMLH  248 (336)
T ss_dssp             CTTS------CCEEECCCTTCEEC-----------------CCCCCCGGGCCHHHHTT----CCCCTHHHHHHHHHHHHH
T ss_pred             eCCC------CEEEEeeCCCCeEccCCCccc-----ceecCCccccCccccCHHHHCC----CCCCcHHHHHHHHHHHHH
Confidence            8773      259999999998765432111     1111234579999999999986    678999999999999999


Q ss_pred             HHhCCCCCCCCCHHHHHHHHHcCCCCCcchHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCC
Q 003185          741 LLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPT  820 (840)
Q Consensus       741 LLTG~~PF~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L~dLI~rCL~~DP~eRPS  820 (840)
                      |+||++||.+.+..++...|.....+. .+                        ....+++.+.+||.+||+.||.+|||
T Consensus       249 mltG~~Pf~~~~~~~~~~~i~~~~~~~-~~------------------------~~~~~s~~~~~li~~~L~~dP~~R~s  303 (336)
T 4g3f_A          249 MLNGCHPWTQYFRGPLCLKIASEPPPI-RE------------------------IPPSCAPLTAQAIQEGLRKEPVHRAS  303 (336)
T ss_dssp             HHHSSCSSTTTCCSCCHHHHHHSCCGG-GG------------------------SCTTSCHHHHHHHHHHTCSSGGGSCC
T ss_pred             HHHCcCCCCCCCHHHHHHHHHcCCCCc-hh------------------------cCccCCHHHHHHHHHHccCCHhHCcC
Confidence            999999998887777777776653211 10                        01123568999999999999999999


Q ss_pred             HHHHHHHHHhhc
Q 003185          821 AGDLYEMFVART  832 (840)
Q Consensus       821 a~ELLehLe~l~  832 (840)
                      +.||+++|....
T Consensus       304 a~el~~~l~~~l  315 (336)
T 4g3f_A          304 AMELRRKVGKAL  315 (336)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHH
Confidence            999999987654


No 8  
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00  E-value=4.5e-51  Score=445.21  Aligned_cols=253  Identities=21%  Similarity=0.271  Sum_probs=212.0

Q ss_pred             CCCCCceeeeeecccCceEEEEEEE--CCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeEEec
Q 003185          502 GSFPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKIS  579 (840)
Q Consensus       502 ~~~~~y~i~~~LG~G~fG~Vy~a~~--~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~l~g~~~~  579 (840)
                      ...++|++++.||+|+||+||+|++  .++.||+|++.....     ......+.+.+|+.+|++|+|||||+++++|.+
T Consensus        29 ~~~~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~-----~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~  103 (311)
T 4aw0_A           29 KRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHI-----IKENKVPYVTRERDVMSRLDHPFFVKLYFTFQD  103 (311)
T ss_dssp             CCGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHH-----HHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEEC
T ss_pred             CCccccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHC-----CCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEe
Confidence            3456899999999999999999997  578999999754321     111223456999999999999999999999987


Q ss_pred             CCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCCCcEE
Q 003185          580 SKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENIL  659 (840)
Q Consensus       580 ~~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKPeNIL  659 (840)
                      .+.              +|||||||+||+|.++|.+     ...+++..++.++.||+.||+|||++|||||||||+|||
T Consensus       104 ~~~--------------~yivmEy~~gG~L~~~i~~-----~~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDlKPeNIL  164 (311)
T 4aw0_A          104 DEK--------------LYFGLSYAKNGELLKYIRK-----IGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENIL  164 (311)
T ss_dssp             SSE--------------EEEEECCCTTEEHHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEE
T ss_pred             CCE--------------EEEEEecCCCCCHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeE
Confidence            664              4999999999999999986     357999999999999999999999999999999999999


Q ss_pred             EecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHHHHHH
Q 003185          660 IDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLL  739 (840)
Q Consensus       660 Ld~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLGvIL~  739 (840)
                      |+.+       +.+||+|||+|+.+......        ......+||+.|||||++.+    ..|+.++|||||||+||
T Consensus       165 l~~~-------g~vKl~DFGla~~~~~~~~~--------~~~~~~~GTp~YmAPEvl~~----~~y~~~~DiWSlGvily  225 (311)
T 4aw0_A          165 LNED-------MHIQITDFGTAKVLSPESKQ--------ARANSFVGTAQYVSPELLTE----KSACKSSDLWALGCIIY  225 (311)
T ss_dssp             ECTT-------SCEEECCCTTCEECCTTTTC--------CCBCCCCSCGGGCCHHHHHH----SCBCHHHHHHHHHHHHH
T ss_pred             EcCC-------CCEEEEEcCCceecCCCCCc--------ccccCcccCcccCCHHHHcC----CCCCcHHHHHHHHHHHH
Confidence            9877       46999999999876432211        11245689999999999987    67899999999999999


Q ss_pred             HHHhCCCCCCCCCHHHHHHHHHcCCCCCcchHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC
Q 003185          740 ELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP  819 (840)
Q Consensus       740 ELLTG~~PF~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L~dLI~rCL~~DP~eRP  819 (840)
                      ||+||+.||.+.+..+++..|.+... .+++                           ..++++++||.+||..||.+||
T Consensus       226 eml~G~~PF~~~~~~~~~~~i~~~~~-~~p~---------------------------~~s~~~~dli~~lL~~dp~~R~  277 (311)
T 4aw0_A          226 QLVAGLPPFRAGNEGLIFAKIIKLEY-DFPE---------------------------KFFPKARDLVEKLLVLDATKRL  277 (311)
T ss_dssp             HHHHSSCSSCCSSHHHHHHHHHHTCC-CCCT---------------------------TCCHHHHHHHHHHSCSSGGGST
T ss_pred             HHHhCCCCCCCCCHHHHHHHHHcCCC-CCCc---------------------------ccCHHHHHHHHHHccCCHhHCc
Confidence            99999999999999999988877642 2221                           1245789999999999999999


Q ss_pred             CHHHHH
Q 003185          820 TAGDLY  825 (840)
Q Consensus       820 Sa~ELL  825 (840)
                      |++|++
T Consensus       278 t~~e~~  283 (311)
T 4aw0_A          278 GCEEME  283 (311)
T ss_dssp             TSGGGT
T ss_pred             ChHHHc
Confidence            999853


No 9  
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00  E-value=1.1e-50  Score=435.27  Aligned_cols=255  Identities=24%  Similarity=0.298  Sum_probs=198.3

Q ss_pred             CCCCCceeeeeecccCceEEEEEEE--CCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeEEec
Q 003185          502 GSFPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKIS  579 (840)
Q Consensus       502 ~~~~~y~i~~~LG~G~fG~Vy~a~~--~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~l~g~~~~  579 (840)
                      ..+++|++.+.||+|+||+||+|.+  .++.||+|++.......     .....++.+|+.+|++|+|||||++++++.+
T Consensus        10 ~~ig~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~-----~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~   84 (275)
T 3hyh_A           10 AHIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAK-----SDMQGRIEREISYLRLLRHPHIIKLYDVIKS   84 (275)
T ss_dssp             ----CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC-----------CHHHHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred             CEeeCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCC-----HHHHHHHHHHHHHHHHCCCCCCCeEEEEEEE
Confidence            4578999999999999999999997  57899999975432211     1223345999999999999999999999987


Q ss_pred             CCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCCCcEE
Q 003185          580 SKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENIL  659 (840)
Q Consensus       580 ~~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKPeNIL  659 (840)
                      .+.              .||||||+ +|+|.+++.+     ...+++..++.++.||+.||+|||++||+||||||+|||
T Consensus        85 ~~~--------------~~ivmEy~-~g~L~~~l~~-----~~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDiKP~NIL  144 (275)
T 3hyh_A           85 KDE--------------IIMVIEYA-GNELFDYIVQ-----RDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLL  144 (275)
T ss_dssp             SSE--------------EEEEEECC-CEEHHHHHHH-----SCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEE
T ss_pred             CCE--------------EEEEEeCC-CCCHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCChHHeE
Confidence            654              59999999 5799999986     357999999999999999999999999999999999999


Q ss_pred             EecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHHHHHH
Q 003185          660 IDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLL  739 (840)
Q Consensus       660 Ld~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLGvIL~  739 (840)
                      |+.+       +.+||+|||+|+.......           ....+||+.|||||++.+   ...++.++|||||||+||
T Consensus       145 l~~~-------~~vkl~DFGla~~~~~~~~-----------~~~~~GT~~Y~APE~~~~---~~y~~~~~DiwSlGvily  203 (275)
T 3hyh_A          145 LDEH-------LNVKIADFGLSNIMTDGNF-----------LKTSCGSPNYAAPEVISG---KLYAGPEVDVWSCGVILY  203 (275)
T ss_dssp             ECTT-------CCEEECCSSCC--------------------------CTTSCHHHHSS---SSCCCTHHHHHHHHHHHH
T ss_pred             ECCC-------CCEEEeecCCCeecCCCCc-----------cCCeeECcccCChhhhcC---CCCCCChhhhHHHHHHHH
Confidence            9877       4599999999986543221           234579999999999986   233468999999999999


Q ss_pred             HHHhCCCCCCCCCHHHHHHHHHcCCCCCcchHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC
Q 003185          740 ELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP  819 (840)
Q Consensus       740 ELLTG~~PF~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L~dLI~rCL~~DP~eRP  819 (840)
                      ||+||+.||.+.+..++...+.++.. .++.                           ..++.+.+||.+||+.||.+||
T Consensus       204 ~lltg~~PF~~~~~~~~~~~i~~~~~-~~p~---------------------------~~s~~~~~li~~~L~~dP~~R~  255 (275)
T 3hyh_A          204 VMLCRRLPFDDESIPVLFKNISNGVY-TLPK---------------------------FLSPGAAGLIKRMLIVNPLNRI  255 (275)
T ss_dssp             HHHHSSCSSCCSSHHHHHHHHHHTCC-CCCT---------------------------TSCHHHHHHHHHHSCSSGGGSC
T ss_pred             HHHHCCCCCCCCCHHHHHHHHHcCCC-CCCC---------------------------CCCHHHHHHHHHHccCChhHCc
Confidence            99999999999988888888876643 1221                           1245789999999999999999


Q ss_pred             CHHHHHHHHHh
Q 003185          820 TAGDLYEMFVA  830 (840)
Q Consensus       820 Sa~ELLehLe~  830 (840)
                      |++|+++|.+-
T Consensus       256 s~~eil~hpw~  266 (275)
T 3hyh_A          256 SIHEIMQDDWF  266 (275)
T ss_dssp             CHHHHHHCHHH
T ss_pred             CHHHHHcCccc
Confidence            99999999654


No 10 
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00  E-value=1.4e-50  Score=458.07  Aligned_cols=255  Identities=26%  Similarity=0.403  Sum_probs=216.5

Q ss_pred             CCCceeeeeecccCceEEEEEEE--CCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeEEecCC
Q 003185          504 FPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK  581 (840)
Q Consensus       504 ~~~y~i~~~LG~G~fG~Vy~a~~--~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~l~g~~~~~~  581 (840)
                      -..|++.++||+|+||.||+|++  .+..||+|++.+....    ..    +.+.+|+.+|+.|+|||||+++++|...+
T Consensus       150 ~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~----~~----~~~~~Ei~il~~l~HpnIV~l~~~~~~~~  221 (423)
T 4fie_A          150 RSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQ----RR----ELLFNEVVIMRDYQHENVVEMYNSYLVGD  221 (423)
T ss_dssp             GGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCS----SG----GGHHHHHHHHHHCCCTTBCCEEEEEEETT
T ss_pred             hHhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchh----HH----HHHHHHHHHHHhCCCCCCCceEEEEEECC
Confidence            45799999999999999999998  5789999997654321    12    23589999999999999999999999766


Q ss_pred             CCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCCCcEEEe
Q 003185          582 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID  661 (840)
Q Consensus       582 ~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKPeNILLd  661 (840)
                      .              +|||||||+||+|.+++..      ..+++..+..|+.||+.||+|||++|||||||||+||||+
T Consensus       222 ~--------------~~iVmEy~~gG~L~~~i~~------~~l~e~~~~~~~~qil~aL~ylH~~~IiHRDiKp~NILl~  281 (423)
T 4fie_A          222 E--------------LWVVMEFLEGGALTDIVTH------TRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLT  281 (423)
T ss_dssp             E--------------EEEEEECCTTEEHHHHHHH------SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSTTTEEEC
T ss_pred             E--------------EEEEEeCCCCCcHHHHHhc------cCCCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEc
Confidence            4              5999999999999999976      4699999999999999999999999999999999999999


Q ss_pred             cccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHHHHHHHH
Q 003185          662 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL  741 (840)
Q Consensus       662 ~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLGvIL~EL  741 (840)
                      .+       +.+||+|||+|+.+.....          .....+||+.|||||++.+    ..|+.++|||||||+||||
T Consensus       282 ~~-------g~vKl~DFGla~~~~~~~~----------~~~~~~GTp~YmAPEvl~~----~~y~~~~DiWSlGvilyem  340 (423)
T 4fie_A          282 HD-------GRVKLSDFGFCAQVSKEVP----------RRKSLVGTPYWMAPELISR----LPYGPEVDIWSLGIMVIEM  340 (423)
T ss_dssp             TT-------CCEEECCCTTCEECCSSCC----------CBCCCEECTTTCCHHHHTT----CCBCTHHHHHHHHHHHHHH
T ss_pred             CC-------CCEEEecCccceECCCCCc----------cccccccCcCcCCHHHHCC----CCCCcHHHHHHHHHHHHHH
Confidence            77       4599999999987644221          1244689999999999986    6789999999999999999


Q ss_pred             HhCCCCCCCCCHHHHHHHHHcCCCCCcchHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH
Q 003185          742 LTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA  821 (840)
Q Consensus       742 LTG~~PF~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L~dLI~rCL~~DP~eRPSa  821 (840)
                      ++|++||.+.+..+++..|.....+.+..                         ....++.+.+||.+||..||.+|||+
T Consensus       341 l~G~~PF~~~~~~~~~~~i~~~~~~~~~~-------------------------~~~~s~~~~dli~~~L~~dP~~R~ta  395 (423)
T 4fie_A          341 VDGEPPYFNEPPLKAMKMIRDNLPPRLKN-------------------------LHKVSPSLKGFLDRLLVRDPAQRATA  395 (423)
T ss_dssp             HHSSCTTTTSCHHHHHHHHHHSCCCCCSC-------------------------TTSSCHHHHHHHHHHSCSSTTTSCCH
T ss_pred             HHCCCCCCCcCHHHHHHHHHcCCCCCCcc-------------------------cccCCHHHHHHHHHHcCCChhHCcCH
Confidence            99999999999999988887765433321                         01235689999999999999999999


Q ss_pred             HHHHHHHHhhc
Q 003185          822 GDLYEMFVART  832 (840)
Q Consensus       822 ~ELLehLe~l~  832 (840)
                      +||++|-+-..
T Consensus       396 ~ell~Hp~~~~  406 (423)
T 4fie_A          396 AELLKHPFLAK  406 (423)
T ss_dssp             HHHTTCGGGGG
T ss_pred             HHHhcCHHhcC
Confidence            99999966543


No 11 
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00  E-value=8.9e-50  Score=431.34  Aligned_cols=256  Identities=23%  Similarity=0.339  Sum_probs=203.0

Q ss_pred             CCc-eeeeeecccCceEEEEEEEC--CeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeEEecCC
Q 003185          505 PSL-SSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK  581 (840)
Q Consensus       505 ~~y-~i~~~LG~G~fG~Vy~a~~~--~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~l~g~~~~~~  581 (840)
                      ++| ++.++||+|+||+||+|.+.  +..||+|++...  .......+    +|.+|+.+|++|+|||||+++++|....
T Consensus        25 gr~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~--~~~~~~~~----~~~~E~~il~~l~HpnIV~~~~~~~~~~   98 (290)
T 3fpq_A           25 GRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDR--KLTKSERQ----RFKEEAEMLKGLQHPNIVRFYDSWESTV   98 (290)
T ss_dssp             SSEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGG--GSCHHHHH----HHHHHHHHHHTCCCTTBCCEEEEEEEEE
T ss_pred             CceEEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchh--hCCHHHHH----HHHHHHHHHHhCCCCCCCcEEEEEeecc
Confidence            344 78889999999999999984  667888876433  22333333    4599999999999999999999987532


Q ss_pred             CCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCC--eecccCCCCcEE
Q 003185          582 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKH--IMHRDIKSENIL  659 (840)
Q Consensus       582 ~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~g--IVHRDLKPeNIL  659 (840)
                      .          ....+|||||||+||+|.++|.+     ...+++..++.|+.||+.||+|||++|  ||||||||+|||
T Consensus        99 ~----------~~~~~~lvmEy~~gg~L~~~l~~-----~~~l~~~~~~~~~~qi~~aL~ylH~~~~~IiHRDlKp~NIL  163 (290)
T 3fpq_A           99 K----------GKKCIVLVTELMTSGTLKTYLKR-----FKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIF  163 (290)
T ss_dssp             T----------TEEEEEEEEECCCSCBHHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCCCCCGGGEE
T ss_pred             C----------CCcEEEEEEeCCCCCCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEecccChhhee
Confidence            1          12346999999999999999986     357999999999999999999999998  999999999999


Q ss_pred             EecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHHHHHH
Q 003185          660 IDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLL  739 (840)
Q Consensus       660 Ld~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLGvIL~  739 (840)
                      |+..      .+.+||+|||+|+......            ....+||+.|||||++.+     .|+.++|||||||+||
T Consensus       164 l~~~------~g~vKl~DFGla~~~~~~~------------~~~~~GTp~YmAPE~~~~-----~y~~~~DiwSlGvily  220 (290)
T 3fpq_A          164 ITGP------TGSVKIGDLGLATLKRASF------------AKAVIGTPEFMAPEMYEE-----KYDESVDVYAFGMCML  220 (290)
T ss_dssp             ESST------TSCEEECCTTGGGGCCTTS------------BEESCSSCCCCCGGGGGT-----CCCTHHHHHHHHHHHH
T ss_pred             EECC------CCCEEEEeCcCCEeCCCCc------------cCCcccCccccCHHHcCC-----CCCcHHHHHHHHHHHH
Confidence            9742      1469999999997543211            134579999999999863     5899999999999999


Q ss_pred             HHHhCCCCCCCCC-HHHHHHHHHcCCCCCcchHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCC
Q 003185          740 ELLTLQVPYMGLS-ELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTER  818 (840)
Q Consensus       740 ELLTG~~PF~~~~-~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L~dLI~rCL~~DP~eR  818 (840)
                      ||+||+.||.+.. ...+...+..+..|...                          ....++++.+||.+||..||.+|
T Consensus       221 elltg~~Pf~~~~~~~~~~~~i~~~~~~~~~--------------------------~~~~~~~~~~li~~~L~~dP~~R  274 (290)
T 3fpq_A          221 EMATSEYPYSECQNAAQIYRRVTSGVKPASF--------------------------DKVAIPEVKEIIEGCIRQNKDER  274 (290)
T ss_dssp             HHHHSSCTTTTCSSHHHHHHHHTTTCCCGGG--------------------------GGCCCHHHHHHHHHHSCSSGGGS
T ss_pred             HHHHCCCCCCCCCcHHHHHHHHHcCCCCCCC--------------------------CccCCHHHHHHHHHHccCChhHC
Confidence            9999999997654 45556666554332111                          01124578999999999999999


Q ss_pred             CCHHHHHHHHHh
Q 003185          819 PTAGDLYEMFVA  830 (840)
Q Consensus       819 PSa~ELLehLe~  830 (840)
                      ||++|+++|.+-
T Consensus       275 ~s~~e~l~Hp~~  286 (290)
T 3fpq_A          275 YSIKDLLNHAFF  286 (290)
T ss_dssp             CCHHHHHTSGGG
T ss_pred             cCHHHHhcCccc
Confidence            999999998653


No 12 
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00  E-value=8.4e-50  Score=442.74  Aligned_cols=268  Identities=23%  Similarity=0.357  Sum_probs=216.0

Q ss_pred             CCCCCceeeeeecccCceEEEEEEECC-------eeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCC-CCccee
Q 003185          502 GSFPSLSSCDEAGKSVSSSLFRCKFGS-------ADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRH-SCIVEM  573 (840)
Q Consensus       502 ~~~~~y~i~~~LG~G~fG~Vy~a~~~~-------~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~H-pNIV~l  573 (840)
                      ++.++|++.+.||+|+||.||+|.+.+       +.||||+....   ......+.    +.+|+.+|.++.| ||||++
T Consensus        61 i~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~---~~~~~~~~----~~~E~~il~~l~hhpnIV~l  133 (353)
T 4ase_A           61 FPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEG---ATHSEHRA----LMSELKILIHIGHHLNVVNL  133 (353)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTT---CCHHHHHH----HHHHHHHHHHHCCCTTBCCE
T ss_pred             ecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccc---cChHHHHH----HHHHHHHHHHcCCCCcEEEE
Confidence            456789999999999999999999743       46888875322   22333333    4999999999975 999999


Q ss_pred             eeEEecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhcc-----------CCCCCCHHHHHHHHHHHHHHHHH
Q 003185          574 YGHKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSET-----------GEKHVSVKLALFIAQDVAAALVE  642 (840)
Q Consensus       574 ~g~~~~~~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~-----------~~~~ls~~~~~~Ia~QIa~AL~y  642 (840)
                      +|+|.....             .+|||||||++|+|.++|+.....           ....+++..++.|+.||+.||+|
T Consensus       134 ~g~~~~~~~-------------~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~y  200 (353)
T 4ase_A          134 LGACTKPGG-------------PLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEF  200 (353)
T ss_dssp             EEEECCTTS-------------CCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHH
T ss_pred             EEEEEecCC-------------EEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHh
Confidence            999875432             249999999999999999863221           13458999999999999999999


Q ss_pred             HHhCCeecccCCCCcEEEecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCC
Q 003185          643 LHSKHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKP  722 (840)
Q Consensus       643 LHs~gIVHRDLKPeNILLd~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~  722 (840)
                      ||+++||||||||+||||+.+       +++||+|||+|+.+.......        ......||+.|||||++.+    
T Consensus       201 LH~~~iiHRDLK~~NILl~~~-------~~vKi~DFGlar~~~~~~~~~--------~~~~~~gt~~ymAPE~l~~----  261 (353)
T 4ase_A          201 LASRKCIHRDLAARNILLSEK-------NVVKICDFGLARDIYKDPDYV--------RKGDARLPLKWMAPETIFD----  261 (353)
T ss_dssp             HHHTTCCCSCCSGGGEEECGG-------GCEEECCCGGGSCTTTCTTSE--------EETTEEECGGGCCHHHHHH----
T ss_pred             HhhCCeecCccCccceeeCCC-------CCEEECcchhhhhcccCCCce--------eeccccccccccCHHHHhc----
Confidence            999999999999999999987       569999999998764432110        1234568999999999987    


Q ss_pred             CCCCchhhHHHHHHHHHHHHh-CCCCCCCCC-HHHHHHHHHcCCCCCcchHHhhhccCccccccccCCCCCCchhhhhhH
Q 003185          723 NLYGLEVDIWSYGCLLLELLT-LQVPYMGLS-ELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETL  800 (840)
Q Consensus       723 ~~~s~kSDVWSLGvIL~ELLT-G~~PF~~~~-~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s  800 (840)
                      ..|+.++|||||||+||||+| |+.||.+.+ ...+...+..+.++..++.                           ++
T Consensus       262 ~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~~~~~~~i~~g~~~~~p~~---------------------------~~  314 (353)
T 4ase_A          262 RVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDY---------------------------TT  314 (353)
T ss_dssp             CCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHHTCCCCCCTT---------------------------CC
T ss_pred             CCCCCcccEeehHHHHHHHHhCCCCCCCCCCHHHHHHHHHHcCCCCCCCcc---------------------------CC
Confidence            779999999999999999998 899998875 4456666777766555432                           24


Q ss_pred             HHHHHHHHHhcccCCCCCCCHHHHHHHHHhhcCCC
Q 003185          801 SFLVDVFRRCTEENPTERPTAGDLYEMFVARTSSS  835 (840)
Q Consensus       801 ~~L~dLI~rCL~~DP~eRPSa~ELLehLe~l~~~~  835 (840)
                      +.+.+||.+||+.||.+|||+.+|++||+.+.+..
T Consensus       315 ~~~~~li~~c~~~dP~~RPt~~eil~~L~~llq~~  349 (353)
T 4ase_A          315 PEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN  349 (353)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHHHh
Confidence            57899999999999999999999999999887543


No 13 
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00  E-value=1.2e-50  Score=440.81  Aligned_cols=251  Identities=24%  Similarity=0.277  Sum_probs=204.3

Q ss_pred             CCceeeeeecccCceEEEEEEE-----CCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeEEec
Q 003185          505 PSLSSCDEAGKSVSSSLFRCKF-----GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKIS  579 (840)
Q Consensus       505 ~~y~i~~~LG~G~fG~Vy~a~~-----~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~l~g~~~~  579 (840)
                      ++|++++.||+|+||+||+|+.     .+..||+|++......  ....    .++.+|+.+|++|+|||||++++++.+
T Consensus        24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~--~~~~----~~~~~E~~il~~l~HpnIv~l~~~~~~   97 (304)
T 3ubd_A           24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLK--VRDR----VRTKMERDILVEVNHPFIVKLHYAFQT   97 (304)
T ss_dssp             GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEE--EEEC----C------CCCCCCCCTTEECEEEEEEE
T ss_pred             cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcC--hHHH----HHHHHHHHHHHHCCCCCCCeEEEEEEE
Confidence            6799999999999999999986     3568999997543211  1111    134889999999999999999999987


Q ss_pred             CCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCCCcEE
Q 003185          580 SKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENIL  659 (840)
Q Consensus       580 ~~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKPeNIL  659 (840)
                      .+.              +|||||||+||+|.++|.+     ...+++..++.++.||+.||+|||++|||||||||+|||
T Consensus        98 ~~~--------------~~ivmEy~~gg~L~~~l~~-----~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NIL  158 (304)
T 3ubd_A           98 EGK--------------LYLILDFLRGGDLFTRLSK-----EVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENIL  158 (304)
T ss_dssp             TTE--------------EEEEECCCTTCEEHHHHHH-----HCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEE
T ss_pred             CCE--------------EEEEEEcCCCCCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHeE
Confidence            664              5999999999999999986     356999999999999999999999999999999999999


Q ss_pred             EecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHHHHHH
Q 003185          660 IDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLL  739 (840)
Q Consensus       660 Ld~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLGvIL~  739 (840)
                      ++.+       +.+||+|||+|+.......          .....+||+.|||||++.+    ..|+.++|||||||+||
T Consensus       159 l~~~-------g~vKl~DFGla~~~~~~~~----------~~~~~~GT~~YmAPE~~~~----~~y~~~~DiwSlGvily  217 (304)
T 3ubd_A          159 LDEE-------GHIKLTDFGLSKESIDHEK----------KAYSFCGTVEYMAPEVVNR----RGHTQSADWWSFGVLMF  217 (304)
T ss_dssp             ECTT-------SCEEEESSEEEEC-----C----------CCCSCCCCGGGCCHHHHHT----SCCCTHHHHHHHHHHHH
T ss_pred             EcCC-------CCEEecccccceeccCCCc----------cccccccCcccCCHHHhcc----CCCCCCCcccchHHHHH
Confidence            9887       4599999999986543211          1234679999999999986    67899999999999999


Q ss_pred             HHHhCCCCCCCCCHHHHHHHHHcCCCCCcchHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC
Q 003185          740 ELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP  819 (840)
Q Consensus       740 ELLTG~~PF~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L~dLI~rCL~~DP~eRP  819 (840)
                      ||+||+.||.+.+..++...|.+...+ ++.                           ..++++.+||.+||+.||.+||
T Consensus       218 emltG~~PF~~~~~~~~~~~i~~~~~~-~p~---------------------------~~s~~~~~li~~~L~~dP~~R~  269 (304)
T 3ubd_A          218 EMLTGTLPFQGKDRKETMTMILKAKLG-MPQ---------------------------FLSPEAQSLLRMLFKRNPANRL  269 (304)
T ss_dssp             HHHHSSCSSCCSSHHHHHHHHHHCCCC-CCT---------------------------TSCHHHHHHHHHHTCSSGGGST
T ss_pred             HHHhCCCCCCCcCHHHHHHHHHcCCCC-CCC---------------------------cCCHHHHHHHHHHcccCHHHCC
Confidence            999999999999999998888776432 221                           1245789999999999999999


Q ss_pred             C-----HHHHHHHHH
Q 003185          820 T-----AGDLYEMFV  829 (840)
Q Consensus       820 S-----a~ELLehLe  829 (840)
                      |     ++|+++|.+
T Consensus       270 ta~~~~~~eil~Hp~  284 (304)
T 3ubd_A          270 GAGPDGVEEIKRHSF  284 (304)
T ss_dssp             TCSTTTHHHHHTSGG
T ss_pred             CCCcCCHHHHHcCcc
Confidence            8     589998854


No 14 
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00  E-value=9e-49  Score=425.19  Aligned_cols=269  Identities=25%  Similarity=0.290  Sum_probs=203.9

Q ss_pred             CceeeeeecccCceEEEEEEECCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeEEecCCCCCC
Q 003185          506 SLSSCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWLPS  585 (840)
Q Consensus       506 ~y~i~~~LG~G~fG~Vy~a~~~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~l~g~~~~~~~~p~  585 (840)
                      +|.+.++||+|+||.||+|+++++.||||++...       ..+.+  ....|+..+.+|+|||||+++|++.....   
T Consensus         4 ~i~L~~~iG~G~fG~Vy~~~~~g~~VAvK~l~~~-------~~~~~--~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~---   71 (303)
T 3hmm_A            4 TIVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSR-------EERSW--FREAEIYQTVMLRHENILGFIAADNKDNG---   71 (303)
T ss_dssp             GEEEEEEEEECSSSEEEEEEETTEEEEEEEECGG-------GHHHH--HHHHHHHTSTTCCCTTBCCEEEEEEEECS---
T ss_pred             EEEEEEEEeeCCCeEEEEEEECCEEEEEEEECcc-------chhhH--HHHHHHHHHhcCCCCCCCcEEEEEEecCC---
Confidence            5889999999999999999999999999986432       11222  12457777788999999999999986542   


Q ss_pred             CCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhC--------CeecccCCCCc
Q 003185          586 ADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSK--------HIMHRDIKSEN  657 (840)
Q Consensus       586 ~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~--------gIVHRDLKPeN  657 (840)
                             ....+|||||||++|+|.++|+.      ..+++..+.+++.|++.||+|||++        +||||||||+|
T Consensus        72 -------~~~~~~lV~Ey~~~gsL~~~l~~------~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~N  138 (303)
T 3hmm_A           72 -------TWTQLWLVSDYHEHGSLFDYLNR------YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKN  138 (303)
T ss_dssp             -------SSEEEEEEEECCTTCBHHHHHHH------CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGG
T ss_pred             -------CceEEEEEecCCCCCcHHHHHHh------CCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCccc
Confidence                   12357999999999999999986      4689999999999999999999987        99999999999


Q ss_pred             EEEecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccC--CCCCCchhhHHHHH
Q 003185          658 ILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHK--PNLYGLEVDIWSYG  735 (840)
Q Consensus       658 ILLd~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~--~~~~s~kSDVWSLG  735 (840)
                      |||+.+       +++||+|||+|+..........      ......+||+.|||||++.+...  ...++.++||||||
T Consensus       139 ILl~~~-------~~~Ki~DFGla~~~~~~~~~~~------~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~G  205 (303)
T 3hmm_A          139 ILVKKN-------GTCCIADLGLAVRHDSATDTID------IAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMG  205 (303)
T ss_dssp             EEECTT-------SCEEECCCTTCEEEETTTTEES------CC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHH
T ss_pred             EEECCC-------CCEEEEeCCCCccccCCCCcee------eecccccccccccCHHHhcccccccCCccChhHhhhhHH
Confidence            999877       5699999999987654332211      11234579999999999975211  12367899999999


Q ss_pred             HHHHHHHhCCCCCCCC---------------CHHHHHHHHHc-CCCCCcchHHhhhccCccccccccCCCCCCchhhhhh
Q 003185          736 CLLLELLTLQVPYMGL---------------SELEIHDLIQM-GKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELET  799 (840)
Q Consensus       736 vIL~ELLTG~~PF~~~---------------~~~el~~~I~~-~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  799 (840)
                      |+||||+||.+||...               ...++...+.. ..+|.++..+                      ...+.
T Consensus       206 vvl~El~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~rp~~p~~~----------------------~~~~~  263 (303)
T 3hmm_A          206 LVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRW----------------------QSCEA  263 (303)
T ss_dssp             HHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGG----------------------GSSHH
T ss_pred             HHHHHHHHCCCCCCccccccccchhcccccchHHHHHHHHhcccCCCCCCccc----------------------cchHH
Confidence            9999999997765322               11223333322 2334443221                      11234


Q ss_pred             HHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhcCC
Q 003185          800 LSFLVDVFRRCTEENPTERPTAGDLYEMFVARTSS  834 (840)
Q Consensus       800 s~~L~dLI~rCL~~DP~eRPSa~ELLehLe~l~~~  834 (840)
                      +..+.+|+.+||+.||.+||||.||+++|+.+.+.
T Consensus       264 ~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~~  298 (303)
T 3hmm_A          264 LRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ  298 (303)
T ss_dssp             HHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHH
Confidence            66889999999999999999999999999988754


No 15 
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00  E-value=7e-48  Score=433.77  Aligned_cols=290  Identities=17%  Similarity=0.192  Sum_probs=214.5

Q ss_pred             CCceeeeeecccCceEEEEEEE--CCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeEEecCCC
Q 003185          505 PSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW  582 (840)
Q Consensus       505 ~~y~i~~~LG~G~fG~Vy~a~~--~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~l~g~~~~~~~  582 (840)
                      ++|++++.||+|+||+||+|++  .+..||||++...  .......    +++.+|+.+|+.|+|||||++++++.....
T Consensus        54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~--~~~~~~~----~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~  127 (398)
T 4b99_A           54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNA--FDVVTNA----KRTLRELKILKHFKHDNIIAIKDILRPTVP  127 (398)
T ss_dssp             SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTT--TSSHHHH----HHHHHHHHHHHHCCCTTBCCEEEECCCSSC
T ss_pred             CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECcc--ccchHHH----HHHHHHHHHHHhcCCCCcceEeeeeecccc
Confidence            4799999999999999999998  5789999996432  2223333    345899999999999999999999875432


Q ss_pred             CCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCCCcEEEec
Q 003185          583 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL  662 (840)
Q Consensus       583 ~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKPeNILLd~  662 (840)
                      +        .....+|||||||+ |+|.++|.+     ...+++..++.|++||+.||.|||++|||||||||+|||++.
T Consensus       128 ~--------~~~~~~~ivmE~~~-g~L~~~i~~-----~~~l~~~~~~~~~~qil~al~ylH~~~iiHRDlKP~NIl~~~  193 (398)
T 4b99_A          128 Y--------GEFKSVYVVLDLME-SDLHQIIHS-----SQPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNE  193 (398)
T ss_dssp             T--------TTCCCEEEEEECCS-EEHHHHHTS-----SSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECT
T ss_pred             c--------ccCCEEEEEEeCCC-CCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCcCcCCCcCccccccCC
Confidence            2        01235799999996 689999864     467999999999999999999999999999999999999997


Q ss_pred             ccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHHHHHHHHH
Q 003185          663 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL  742 (840)
Q Consensus       663 ~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLGvIL~ELL  742 (840)
                      +       +.+||+|||+|+.+......      ........+||+.|||||++.+   ...++.++||||+|||||||+
T Consensus       194 ~-------~~~Ki~DFGla~~~~~~~~~------~~~~~~~~~GT~~Y~APEv~~~---~~~~~~~~DiWSlG~il~ell  257 (398)
T 4b99_A          194 N-------CELKIGDFGMARGLCTSPAE------HQYFMTEYVATRWYRAPELMLS---LHEYTQAIDLWSVGCIFGEML  257 (398)
T ss_dssp             T-------CCEEECCCTTCBCC-------------CCCCCSSCCCCTTCCHHHHTT---CSCCCTHHHHHHHHHHHHHHH
T ss_pred             C-------CCEEEeecceeeecccCccc------cccccccceeChHhcCHHHhcC---CCCCCChhheehhHHHHHHHH
Confidence            7       46999999999876432211      1112345689999999999876   245799999999999999999


Q ss_pred             hCCCCCCCCCHHHHHHHHHcCCCCCcchHHhhhccCccccccccCCCC---CCchhhhhhHHHHHHHHHHhcccCCCCCC
Q 003185          743 TLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGF---EKPEAELETLSFLVDVFRRCTEENPTERP  819 (840)
Q Consensus       743 TG~~PF~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~---~~~~~~~~~s~~L~dLI~rCL~~DP~eRP  819 (840)
                      +|++||.+.+..+.+..|...........+..................   .........++++++||.+||.+||.+||
T Consensus       258 ~G~~pF~g~~~~~~l~~I~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~  337 (398)
T 4b99_A          258 ARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARI  337 (398)
T ss_dssp             HTSCSSCCSSHHHHHHHHHHHHCCCCGGGTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSC
T ss_pred             HCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCc
Confidence            999999999998888888665222212111111000000000000000   00111223467899999999999999999


Q ss_pred             CHHHHHHHHHh
Q 003185          820 TAGDLYEMFVA  830 (840)
Q Consensus       820 Sa~ELLehLe~  830 (840)
                      |++|+|+|.+-
T Consensus       338 ta~e~L~Hp~f  348 (398)
T 4b99_A          338 SAAAALRHPFL  348 (398)
T ss_dssp             CHHHHTTSGGG
T ss_pred             CHHHHhcCHhh
Confidence            99999999654


No 16 
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00  E-value=5.6e-48  Score=418.74  Aligned_cols=274  Identities=23%  Similarity=0.287  Sum_probs=191.0

Q ss_pred             CCCceeeeeecccCceEEEEEEE--CCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeEEecCC
Q 003185          504 FPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK  581 (840)
Q Consensus       504 ~~~y~i~~~LG~G~fG~Vy~a~~--~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~l~g~~~~~~  581 (840)
                      +++|++.+.||+|+||.||+|++  .+..||+|++....   ....    .+.+.+|+.+|++|+|||||++++++...+
T Consensus         4 l~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~---~~~~----~~~~~~E~~il~~l~HpnIV~~~~~~~~~~   76 (299)
T 4g31_A            4 LTDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPN---RELA----REKVMREVKALAKLEHPGIVRYFNAWLEKN   76 (299)
T ss_dssp             HHHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECS---SHHH----HHHHHHHHHHHTTCCCTTBCCEEEEEEEEC
T ss_pred             chhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccC---CHHH----HHHHHHHHHHHHhCCCCCCCeEEEEEEecC
Confidence            35699999999999999999997  47899999875432   2222    234599999999999999999999998654


Q ss_pred             CCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCCCcEEEe
Q 003185          582 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID  661 (840)
Q Consensus       582 ~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKPeNILLd  661 (840)
                      ....  -........+|||||||+||+|.+++...  .......+..++.|+.||+.||+|||++|||||||||+||||+
T Consensus        77 ~~~~--~~~~~~~~~l~ivmE~~~gg~L~~~l~~~--~~~~~~~~~~~~~i~~qi~~al~ylH~~~IiHRDlKp~NILl~  152 (299)
T 4g31_A           77 TTEK--LQPSSPKVYLYIQMQLCRKENLKDWMNGR--CTIEERERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFT  152 (299)
T ss_dssp             ------------CEEEEEEEECCCSCCHHHHHHTC--CSGGGSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEC
T ss_pred             cccc--ccccCCCcEEEEEEecCCCCcHHHHHHhc--CCCChhHHHHHHHHHHHHHHHHHHHHHCcCccccCcHHHeEEC
Confidence            2100  00011233579999999999999999751  1112345677899999999999999999999999999999998


Q ss_pred             cccccCCCCCeEEEeecCCcccccccccccccc--cCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHHHHHH
Q 003185          662 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIA--HRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLL  739 (840)
Q Consensus       662 ~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~--~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLGvIL~  739 (840)
                      .+       +.+||+|||+|+.+..........  ..........+||+.|||||++.+    ..|+.++|||||||+||
T Consensus       153 ~~-------~~vKl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~----~~y~~~~DiwSlGvily  221 (299)
T 4g31_A          153 MD-------DVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHG----NSYSHKVDIFSLGLILF  221 (299)
T ss_dssp             TT-------CCEEECCCCCC--------------------------CCCTTSCHHHHTT----CCCCTHHHHHHHHHHHH
T ss_pred             CC-------CcEEEccCccceecCCCccccccccccccccccCCcccCccccCHHHHcC----CCCCCHHHHHHHHHHHH
Confidence            77       469999999998775432211100  001111234579999999999986    67899999999999999


Q ss_pred             HHHhCCCCCCCCC-HHHHHHHHHcCCCCCcchHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCC
Q 003185          740 ELLTLQVPYMGLS-ELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTER  818 (840)
Q Consensus       740 ELLTG~~PF~~~~-~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L~dLI~rCL~~DP~eR  818 (840)
                      ||++   ||.+.. .......+.....|.                           .....++.+.+||.+||+.||.+|
T Consensus       222 ell~---Pf~~~~~~~~~~~~~~~~~~p~---------------------------~~~~~~~~~~~li~~~L~~dP~~R  271 (299)
T 4g31_A          222 ELLY---PFSTQMERVRTLTDVRNLKFPP---------------------------LFTQKYPCEYVMVQDMLSPSPMER  271 (299)
T ss_dssp             HHHS---CCSSHHHHHHHHHHHHTTCCCH---------------------------HHHHHCHHHHHHHHHHTCSSGGGS
T ss_pred             HHcc---CCCCccHHHHHHHHHhcCCCCC---------------------------CCcccCHHHHHHHHHHcCCChhHC
Confidence            9996   775432 222333333333221                           112224467889999999999999


Q ss_pred             CCHHHHHHHHH
Q 003185          819 PTAGDLYEMFV  829 (840)
Q Consensus       819 PSa~ELLehLe  829 (840)
                      ||+.||++|..
T Consensus       272 ps~~eil~h~~  282 (299)
T 4g31_A          272 PEAINIIENAV  282 (299)
T ss_dssp             CCHHHHHTSGG
T ss_pred             cCHHHHhcCHh
Confidence            99999999844


No 17 
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00  E-value=7.3e-46  Score=435.46  Aligned_cols=259  Identities=22%  Similarity=0.253  Sum_probs=216.1

Q ss_pred             CCCCceeeeeecccCceEEEEEEE--CCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeEEecC
Q 003185          503 SFPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISS  580 (840)
Q Consensus       503 ~~~~y~i~~~LG~G~fG~Vy~a~~--~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~l~g~~~~~  580 (840)
                      .+++|++.+.||+|+||.||+|.+  .+..||+|++...    .....    +.+.+|+.+|+.|+|||||+++++|...
T Consensus       155 il~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~----~~~~~----~~~~~Ei~il~~l~hpnIv~l~~~~~~~  226 (573)
T 3uto_A          155 VLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTP----HESDK----ETVRKEIQTMSVLRHPTLVNLHDAFEDD  226 (573)
T ss_dssp             GGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC----SHHHH----HHHHHHHHHHHHTCCTTBCCEEEEEECS
T ss_pred             CccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEecc----chhhH----HHHHHHHHHHHhCCCCCCCeEEEEEEEC
Confidence            468999999999999999999997  5788999987533    12222    3458999999999999999999999876


Q ss_pred             CCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCCCcEEE
Q 003185          581 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILI  660 (840)
Q Consensus       581 ~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKPeNILL  660 (840)
                      ..              +|||||||+||+|.++|..    ....+++..+..++.||+.||.|||++||+||||||+|||+
T Consensus       227 ~~--------------~~iv~E~~~gg~L~~~i~~----~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHRDlKp~Nill  288 (573)
T 3uto_A          227 NE--------------MVMIYEFMSGGELFEKVAD----EHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMF  288 (573)
T ss_dssp             SE--------------EEEEEECCCCCBHHHHHTC----TTSCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE
T ss_pred             CE--------------EEEEEeecCCCcHHHHHHH----hCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhccc
Confidence            54              5999999999999999863    23579999999999999999999999999999999999999


Q ss_pred             ecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHHHHHHH
Q 003185          661 DLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLE  740 (840)
Q Consensus       661 d~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLGvIL~E  740 (840)
                      +.+.     .+.+||+|||+|+.+......           ...+||+.|||||++.+    ..|+.++|||||||+|||
T Consensus       289 ~~~~-----~~~vKl~DFG~a~~~~~~~~~-----------~~~~GT~~y~APEv~~~----~~y~~~~DiWSlGvilye  348 (573)
T 3uto_A          289 TTKR-----SNELKLIDFGLTAHLDPKQSV-----------KVTTGTAEFAAPEVAEG----KPVGYYTDMWSVGVLSYI  348 (573)
T ss_dssp             SSSS-----CCCEEECCCSSCEECCTTSEE-----------EEECSSGGGCCHHHHTT----CCBCHHHHHHHHHHHHHH
T ss_pred             cCCC-----CCCEEEeeccceeEccCCCce-----------eeeEECccccCHHHhCC----CCCCcHHHHHHHHHHHHH
Confidence            8652     257999999999877543221           23579999999999986    678999999999999999


Q ss_pred             HHhCCCCCCCCCHHHHHHHHHcCCCCCcchHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCC
Q 003185          741 LLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPT  820 (840)
Q Consensus       741 LLTG~~PF~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L~dLI~rCL~~DP~eRPS  820 (840)
                      |++|..||.+.+..+++..|..........                        .....++.+++||.+||..||.+|||
T Consensus       349 ml~G~~Pf~~~~~~~~~~~i~~~~~~~~~~------------------------~~~~~s~~~~dli~~~L~~dp~~R~t  404 (573)
T 3uto_A          349 LLSGLSPFGGENDDETLRNVKSCDWNMDDS------------------------AFSGISEDGKDFIRKLLLADPNTRMT  404 (573)
T ss_dssp             HHHSCCSSCCSSHHHHHHHHHTTCCCCCSG------------------------GGTTSCHHHHHHHHTTSCSSGGGSCC
T ss_pred             HHHCCCCCCCcCHHHHHHHHHhCCCCCCcc------------------------cccCCCHHHHHHHHHHccCChhHCcC
Confidence            999999999999999988887764321111                        11223567899999999999999999


Q ss_pred             HHHHHHHHHhh
Q 003185          821 AGDLYEMFVAR  831 (840)
Q Consensus       821 a~ELLehLe~l  831 (840)
                      +.|+++|.+-.
T Consensus       405 ~~e~l~Hpw~~  415 (573)
T 3uto_A          405 IHQALEHPWLT  415 (573)
T ss_dssp             HHHHHHSTTTS
T ss_pred             HHHHhcCcCcC
Confidence            99999996543


No 18 
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00  E-value=7.5e-46  Score=412.12  Aligned_cols=285  Identities=20%  Similarity=0.171  Sum_probs=199.7

Q ss_pred             CCceeeeeecccCceEEEEEEE-----CCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhC-CCCCcceeeeEEe
Q 003185          505 PSLSSCDEAGKSVSSSLFRCKF-----GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEMYGHKI  578 (840)
Q Consensus       505 ~~y~i~~~LG~G~fG~Vy~a~~-----~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L-~HpNIV~l~g~~~  578 (840)
                      ++|++.++||+|+||+||+|++     .+..||+|++....      .    ..++.+|+.+|+.+ .|||||+++++|.
T Consensus        21 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~------~----~~~~~~E~~~l~~~~~h~nIv~l~~~~~   90 (361)
T 4f9c_A           21 NVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS------H----PIRIAAELQCLTVAGGQDNVMGVKYCFR   90 (361)
T ss_dssp             GTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS------C----HHHHHHHHHHHHHTCSBTTBCCCSEEEE
T ss_pred             CcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc------C----HHHHHHHHHHHHHhcCCCCCceEEEEEE
Confidence            5799999999999999999986     25678998753221      1    12348899999999 5999999999998


Q ss_pred             cCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCCCcE
Q 003185          579 SSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENI  658 (840)
Q Consensus       579 ~~~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKPeNI  658 (840)
                      ..+.              .||||||++||+|.+++.        .+++..++.++.||+.||+|||++|||||||||+||
T Consensus        91 ~~~~--------------~~lvmE~~~g~~L~~~~~--------~l~~~~~~~~~~qll~al~ylH~~gIiHRDiKPeNi  148 (361)
T 4f9c_A           91 KNDH--------------VVIAMPYLEHESFLDILN--------SLSFQEVREYMLNLFKALKRIHQFGIVHRDVKPSNF  148 (361)
T ss_dssp             ETTE--------------EEEEEECCCCCCHHHHHT--------TCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGE
T ss_pred             ECCE--------------EEEEEeCCCcccHHHHHc--------CCCHHHHHHHHHHHHHHHHHHHHCCeEeCcCCHHHe
Confidence            7654              599999999999999984        389999999999999999999999999999999999


Q ss_pred             EEecccccCCCCCeEEEeecCCccccccccccccc------------------ccCCCCCCCcccCCCcccchhhhhccc
Q 003185          659 LIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCI------------------AHRGIPAPDVCVGTPRWMAPEVLRAMH  720 (840)
Q Consensus       659 LLd~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~------------------~~~~~~~~~~~vGT~~YmAPEvL~~~~  720 (840)
                      ||+.+.      +.+||+|||+|+...........                  ...........+||+.|||||++.+  
T Consensus       149 Ll~~~~------~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~--  220 (361)
T 4f9c_A          149 LYNRRL------KKYALVDFGLAQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTK--  220 (361)
T ss_dssp             EEETTT------TEEEECCCTTCEECTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTT--
T ss_pred             EEeCCC------CeEEECcCCCCcccCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcC--
Confidence            998652      46999999999865432211000                  0000111234579999999999976  


Q ss_pred             CCCCCCchhhHHHHHHHHHHHHhCCCCCCC-CCHHHHHHHHHcCCCC-----------------------CcchHHhhhc
Q 003185          721 KPNLYGLEVDIWSYGCLLLELLTLQVPYMG-LSELEIHDLIQMGKRP-----------------------RLTDELEALG  776 (840)
Q Consensus       721 ~~~~~s~kSDVWSLGvIL~ELLTG~~PF~~-~~~~el~~~I~~~~~p-----------------------~l~~~l~~~~  776 (840)
                       ...++.++||||+||+||||+||+.||.. .+..+.+..|......                       ..........
T Consensus       221 -~~~y~~~~DiWSlG~il~ell~G~~Pf~~~~~~~~~l~~I~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~  299 (361)
T 4f9c_A          221 -CPNQTTAIDMWSAGVIFLSLLSGRYPFYKASDDLTALAQIMTIRGSRETIQAAKTFGKSILCSKEVPAQDLRKLCERLR  299 (361)
T ss_dssp             -CSCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTEEEEESSCCCCCCHHHHHHHHC
T ss_pred             -CCCCCCccchhhhHHHHHHHHHCCCCCCCCCCHHHHHHHHHHhcCCccchhhhhhccccccccccCcchhhhHHHHhhc
Confidence             24589999999999999999999999954 4555555554331100                       0000000000


Q ss_pred             cCcc--ccc-cccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHHHh
Q 003185          777 SCHE--HEV-AQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAGDLYEMFVA  830 (840)
Q Consensus       777 ~~~~--~~~-~~~~~~~~~~~~~~~~s~~L~dLI~rCL~~DP~eRPSa~ELLehLe~  830 (840)
                      ....  +.. ................++++++||.+||.+||.+|||++|+++|.+-
T Consensus       300 ~~~~~~p~~~~~~~~~~~~~~~~~~is~~a~DLl~~lL~~dP~~R~ta~eaL~Hp~f  356 (361)
T 4f9c_A          300 GMDSSTPKLTSDIQGHATNLEGWNEVPDEAYDLLDKLLDLNPASRITAEEALLHPFF  356 (361)
T ss_dssp             ----------------------CTTCCHHHHHHHHHHTCSCTTTSCCHHHHHTSGGG
T ss_pred             cccccccccccccccccccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhcCccc
Confidence            0000  000 00000000111223456789999999999999999999999999653


No 19 
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00  E-value=2.1e-45  Score=434.57  Aligned_cols=257  Identities=21%  Similarity=0.251  Sum_probs=205.0

Q ss_pred             CCCCCceeeeeecccCceEEEEEEE--CCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeEEec
Q 003185          502 GSFPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKIS  579 (840)
Q Consensus       502 ~~~~~y~i~~~LG~G~fG~Vy~a~~--~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~l~g~~~~  579 (840)
                      ..+++|++++.||+|+||.||+|+.  .+..||+|++.........  ..........++.+++.++|||||+++++|.+
T Consensus       186 ~slddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~--~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~  263 (689)
T 3v5w_A          186 LTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQ--GETLALNERIMLSLVSTGDCPFIVCMSYAFHT  263 (689)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTT--CHHHHHHHHHHHHHHSSSCCTTBCCEEEEEEC
T ss_pred             CchHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhh--hHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEE
Confidence            6789999999999999999999997  6789999997543211100  01111112445677788899999999999997


Q ss_pred             CCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCCCcEE
Q 003185          580 SKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENIL  659 (840)
Q Consensus       580 ~~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKPeNIL  659 (840)
                      ...              +|||||||+||+|..+|.+     ...+++..++.++.||+.||.|||++|||||||||+|||
T Consensus       264 ~~~--------------lylVmEy~~GGdL~~~l~~-----~~~l~E~~a~~y~~qIl~aL~yLH~~gIiHRDLKPeNIL  324 (689)
T 3v5w_A          264 PDK--------------LSFILDLMNGGDLHYHLSQ-----HGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANIL  324 (689)
T ss_dssp             SSE--------------EEEEECCCCSCBHHHHHHH-----HCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEE
T ss_pred             CCE--------------EEEEEecCCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHeE
Confidence            764              5999999999999999986     356999999999999999999999999999999999999


Q ss_pred             EecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHHHHHH
Q 003185          660 IDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLL  739 (840)
Q Consensus       660 Ld~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLGvIL~  739 (840)
                      |+.+       +.+||+|||+|+.+....            ....+||+.|||||++..   +..|+.++|||||||+||
T Consensus       325 ld~~-------G~vKL~DFGlA~~~~~~~------------~~t~~GTp~YmAPEvl~~---~~~y~~~vDiWSLGvilY  382 (689)
T 3v5w_A          325 LDEH-------GHVRISDLGLACDFSKKK------------PHASVGTHGYMAPEVLQK---GVAYDSSADWFSLGCMLF  382 (689)
T ss_dssp             ECTT-------SCEEECCCTTCEECSSCC------------CCSCCSCGGGCCHHHHST---TCCCCTHHHHHHHHHHHH
T ss_pred             EeCC-------CCEEecccceeeecCCCC------------CCCccCCcCccCHHHHhC---CCCCCcHHHHHHHHHHHH
Confidence            9987       569999999998764321            234579999999999964   256899999999999999


Q ss_pred             HHHhCCCCCCCC---CHHHHHHHHHcCCCCCcchHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCC
Q 003185          740 ELLTLQVPYMGL---SELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPT  816 (840)
Q Consensus       740 ELLTG~~PF~~~---~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L~dLI~rCL~~DP~  816 (840)
                      ||++|.+||.+.   +..++...+..... .++.                           ..++++.+||.+||..||.
T Consensus       383 EmLtG~~PF~~~~~~~~~~i~~~i~~~~~-~~p~---------------------------~~S~~a~dLI~~lL~~dP~  434 (689)
T 3v5w_A          383 KLLRGHSPFRQHKTKDKHEIDRMTLTMAV-ELPD---------------------------SFSPELRSLLEGLLQRDVN  434 (689)
T ss_dssp             HHHHSSCTTCGGGCCCHHHHHHHHHHCCC-CCCT---------------------------TSCHHHHHHHHHHTCSCGG
T ss_pred             HHHhCCCCCCCCChHHHHHHHHhhcCCCC-CCCc---------------------------cCCHHHHHHHHHHccCCHh
Confidence            999999999754   33344444443321 1221                           1255789999999999999


Q ss_pred             CCCC-----HHHHHHHHH
Q 003185          817 ERPT-----AGDLYEMFV  829 (840)
Q Consensus       817 eRPS-----a~ELLehLe  829 (840)
                      +|++     ++||++|.+
T Consensus       435 ~Rl~~~~~ga~ei~~Hpf  452 (689)
T 3v5w_A          435 RRLGCLGRGAQEVKESPF  452 (689)
T ss_dssp             GCTTCSSSTHHHHTTSGG
T ss_pred             HCCCCCCCCHHHHhcCcc
Confidence            9998     799999854


No 20 
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00  E-value=1.7e-43  Score=382.47  Aligned_cols=266  Identities=27%  Similarity=0.452  Sum_probs=209.3

Q ss_pred             CCCCCceeeeeecccCceEEEEEEECCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeEEecCC
Q 003185          502 GSFPSLSSCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK  581 (840)
Q Consensus       502 ~~~~~y~i~~~LG~G~fG~Vy~a~~~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~l~g~~~~~~  581 (840)
                      +.+.+|++.+.||+|+||.||+|.+.+..+|+|++...  .......+.    +.+|+.+|++++||||+++++++....
T Consensus        34 i~~~~y~i~~~lG~G~~g~V~~~~~~~~~vavK~~~~~--~~~~~~~~~----~~~E~~~l~~l~hp~iv~~~~~~~~~~  107 (309)
T 3p86_A           34 IPWCDLNIKEKIGAGSFGTVHRAEWHGSDVAVKILMEQ--DFHAERVNE----FLREVAIMKRLRHPNIVLFMGAVTQPP  107 (309)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEETTEEEEEEEECCC--CCSHHHHHH----HHHHHHHHHHCCCTTBCCEEEEECSTT
T ss_pred             CChhHceeeeEeecCCCeEEEEEEECCCcEEEEEecCC--CCCHHHHHH----HHHHHHHHHhCCCCCEeeEEEEEEECC
Confidence            56789999999999999999999999999999996533  233333344    489999999999999999999998665


Q ss_pred             CCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCC--eecccCCCCcEE
Q 003185          582 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKH--IMHRDIKSENIL  659 (840)
Q Consensus       582 ~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~g--IVHRDLKPeNIL  659 (840)
                      ..              ++||||+++|+|.+++...  .....+++..++.++.||+.||+|||++|  |+||||||+|||
T Consensus       108 ~~--------------~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~ivH~Dikp~NIl  171 (309)
T 3p86_A          108 NL--------------SIVTEYLSRGSLYRLLHKS--GAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLL  171 (309)
T ss_dssp             CC--------------EEEEECCTTCBHHHHHHST--THHHHSCHHHHHHHHHHHHHHHHHHHTSSSCCCCTTCCGGGEE
T ss_pred             ce--------------EEEEecCCCCcHHHHHhhc--CCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCEECCCCChhhEE
Confidence            43              9999999999999999751  11123899999999999999999999999  999999999999


Q ss_pred             EecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHHHHHH
Q 003185          660 IDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLL  739 (840)
Q Consensus       660 Ld~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLGvIL~  739 (840)
                      ++.+       +.+||+|||+++.......          ......||+.|+|||++.+    ..++.++|||||||++|
T Consensus       172 l~~~-------~~~kL~Dfg~a~~~~~~~~----------~~~~~~gt~~y~aPE~~~~----~~~~~~~DiwslG~il~  230 (309)
T 3p86_A          172 VDKK-------YTVKVCDFGLSRLKASTFL----------SSKSAAGTPEWMAPEVLRD----EPSNEKSDVYSFGVILW  230 (309)
T ss_dssp             ECTT-------CCEEECCCC---------------------------CCTTSCHHHHTT----CCCCTTHHHHHHHHHHH
T ss_pred             EeCC-------CcEEECCCCCCcccccccc----------ccccCCCCccccChhhhcC----CCCCchhhHHHHHHHHH
Confidence            9877       4699999999975433211          1233469999999999986    56789999999999999


Q ss_pred             HHHhCCCCCCCCCHHHHHHHHHcC-CCCCcchHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCC
Q 003185          740 ELLTLQVPYMGLSELEIHDLIQMG-KRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTER  818 (840)
Q Consensus       740 ELLTG~~PF~~~~~~el~~~I~~~-~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L~dLI~rCL~~DP~eR  818 (840)
                      +|++|+.||.+.+..+....+... ....++.                           ..+..+.+||.+||..||.+|
T Consensus       231 elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~l~~li~~~l~~dP~~R  283 (309)
T 3p86_A          231 ELATLQQPWGNLNPAQVVAAVGFKCKRLEIPR---------------------------NLNPQVAAIIEGCWTNEPWKR  283 (309)
T ss_dssp             HHHHCCCTTTTSCHHHHHHHHHHSCCCCCCCT---------------------------TSCHHHHHHHHHHTCSSGGGS
T ss_pred             HHHhCCCCCCCCCHHHHHHHHHhcCCCCCCCc---------------------------cCCHHHHHHHHHHccCChhhC
Confidence            999999999998888877766533 2222221                           124578999999999999999


Q ss_pred             CCHHHHHHHHHhhcCCCCC
Q 003185          819 PTAGDLYEMFVARTSSSIS  837 (840)
Q Consensus       819 PSa~ELLehLe~l~~~~~s  837 (840)
                      ||+.+|++.|+.+......
T Consensus       284 ps~~~ll~~L~~~~~~~~p  302 (309)
T 3p86_A          284 PSFATIMDLLRPLIKSAVP  302 (309)
T ss_dssp             CCHHHHHHHHHHHHC----
T ss_pred             cCHHHHHHHHHHHHHhCCC
Confidence            9999999999999876443


No 21 
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00  E-value=5.3e-43  Score=382.91  Aligned_cols=255  Identities=24%  Similarity=0.344  Sum_probs=212.4

Q ss_pred             CCCCCceeeeeecccCceEEEEEEE--CCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeEEec
Q 003185          502 GSFPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKIS  579 (840)
Q Consensus       502 ~~~~~y~i~~~LG~G~fG~Vy~a~~--~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~l~g~~~~  579 (840)
                      ..+++|++.+.||+|+||.||+|.+  .+..||+|++....  ......+    .+.+|+.+|+.++||||+++++++..
T Consensus        12 ~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~--~~~~~~~----~~~~E~~~l~~l~hpnIv~l~~~~~~   85 (328)
T 3fe3_A           12 PHIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQ--LNPTSLQ----KLFREVRIMKILNHPNIVKLFEVIET   85 (328)
T ss_dssp             CEETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGG--SCHHHHH----HHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred             CccCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhc--CCHHHHH----HHHHHHHHHHhCCCCCEeeEEEEEEE
Confidence            4678999999999999999999997  67899999975432  2233333    34899999999999999999999986


Q ss_pred             CCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCCCcEE
Q 003185          580 SKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENIL  659 (840)
Q Consensus       580 ~~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKPeNIL  659 (840)
                      ...              .|+||||+++++|.+++..     ...+++..++.++.||+.||+|||++||+||||||+|||
T Consensus        86 ~~~--------------~~lv~e~~~~~~L~~~l~~-----~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~NIl  146 (328)
T 3fe3_A           86 EKT--------------LYLIMEYASGGEVFDYLVA-----HGRMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLL  146 (328)
T ss_dssp             SSE--------------EEEEECCCTTCBHHHHHHH-----HCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEE
T ss_pred             CCE--------------EEEEEECCCCCcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCCHHHEE
Confidence            553              5999999999999999976     256999999999999999999999999999999999999


Q ss_pred             EecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHHHHHH
Q 003185          660 IDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLL  739 (840)
Q Consensus       660 Ld~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLGvIL~  739 (840)
                      ++.+       +.+||+|||++........           .....||+.|+|||++.+   ....+.++|||||||+||
T Consensus       147 l~~~-------~~~kl~DFG~a~~~~~~~~-----------~~~~~gt~~y~aPE~~~~---~~~~~~~~DiwslG~il~  205 (328)
T 3fe3_A          147 LDAD-------MNIKIADFGFSNEFTVGGK-----------LDAFCGAPPYAAPELFQG---KKYDGPEVDVWSLGVILY  205 (328)
T ss_dssp             ECTT-------SCEEECSTTCCGGGSSSCG-----------GGTTSSSGGGCCHHHHHT---CCCCSHHHHHHHHHHHHH
T ss_pred             EcCC-------CCEEEeeccCceecCCCCc-----------cccccCCcceeCcccccC---CCcCCchhhhhhhHHHHH
Confidence            9877       4599999999976543221           123469999999999986   233458999999999999


Q ss_pred             HHHhCCCCCCCCCHHHHHHHHHcCCCCCcchHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC
Q 003185          740 ELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP  819 (840)
Q Consensus       740 ELLTG~~PF~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L~dLI~rCL~~DP~eRP  819 (840)
                      +|++|+.||.+.+..++...+..+... ++.                           ..+..+.+||.+||..||.+||
T Consensus       206 ell~g~~pf~~~~~~~~~~~i~~~~~~-~p~---------------------------~~s~~~~~li~~~L~~dP~~R~  257 (328)
T 3fe3_A          206 TLVSGSLPFDGQNLKELRERVLRGKYR-IPF---------------------------YMSTDCENLLKRFLVLNPIKRG  257 (328)
T ss_dssp             HHHHSSCSSCCSSHHHHHHHHHHCCCC-CCT---------------------------TSCHHHHHHHHHHCCSSTTTSC
T ss_pred             HHHhCCCCCCCCCHHHHHHHHHhCCCC-CCC---------------------------CCCHHHHHHHHHHCCCChhHCc
Confidence            999999999999988888887765321 111                           1245789999999999999999


Q ss_pred             CHHHHHHHHHh
Q 003185          820 TAGDLYEMFVA  830 (840)
Q Consensus       820 Sa~ELLehLe~  830 (840)
                      |++|+++|.+-
T Consensus       258 t~~eil~h~~~  268 (328)
T 3fe3_A          258 TLEQIMKDRWI  268 (328)
T ss_dssp             CHHHHTTCTTT
T ss_pred             CHHHHhcCHhh
Confidence            99999998553


No 22 
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00  E-value=7e-43  Score=374.90  Aligned_cols=256  Identities=25%  Similarity=0.418  Sum_probs=211.5

Q ss_pred             CCCCceeeeeecccCceEEEEEEE--CCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeEEecC
Q 003185          503 SFPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISS  580 (840)
Q Consensus       503 ~~~~y~i~~~LG~G~fG~Vy~a~~--~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~l~g~~~~~  580 (840)
                      ..++|++.+.||+|+||.||+|.+  .+..||+|++.......    .    +.+.+|+.+++.++||||+++++++...
T Consensus        18 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~----~----~~~~~E~~~l~~l~hp~iv~~~~~~~~~   89 (297)
T 3fxz_A           18 PKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPK----K----ELIINEILVMRENKNPNIVNYLDSYLVG   89 (297)
T ss_dssp             GGGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSC----H----HHHHHHHHHHHHCCCTTBCCEEEEEEET
T ss_pred             hhhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccH----H----HHHHHHHHHHhcCCCCCCCeEeEEEEEC
Confidence            457899999999999999999986  67889999976543211    1    2348899999999999999999999866


Q ss_pred             CCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCCCcEEE
Q 003185          581 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILI  660 (840)
Q Consensus       581 ~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKPeNILL  660 (840)
                      ..              .++||||+++|+|.+++..      ..+++..++.++.||+.||.|||++||+||||||+|||+
T Consensus        90 ~~--------------~~lv~e~~~~~~L~~~~~~------~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~  149 (297)
T 3fxz_A           90 DE--------------LWVVMEYLAGGSLTDVVTE------TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILL  149 (297)
T ss_dssp             TE--------------EEEEEECCTTCBHHHHHHH------SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE
T ss_pred             CE--------------EEEEEECCCCCCHHHHHhh------cCCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEE
Confidence            53              5999999999999999986      468999999999999999999999999999999999999


Q ss_pred             ecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHHHHHHH
Q 003185          661 DLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLE  740 (840)
Q Consensus       661 d~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLGvIL~E  740 (840)
                      +.+       +.+||+|||++.........          .....||+.|+|||++.+    ..++.++|||||||++|+
T Consensus       150 ~~~-------~~~kl~Dfg~~~~~~~~~~~----------~~~~~gt~~y~aPE~~~~----~~~~~~~DiwslG~il~e  208 (297)
T 3fxz_A          150 GMD-------GSVKLTDFGFCAQITPEQSK----------RSTMVGTPYWMAPEVVTR----KAYGPKVDIWSLGIMAIE  208 (297)
T ss_dssp             CTT-------CCEEECCCTTCEECCSTTCC----------BCCCCSCGGGCCHHHHHC----SCBCTHHHHHHHHHHHHH
T ss_pred             CCC-------CCEEEeeCCCceecCCcccc----------cCCccCCcCccChhhhcC----CCCCcHHHHHHHHHHHHH
Confidence            877       45999999999766432211          233569999999999986    678999999999999999


Q ss_pred             HHhCCCCCCCCCHHHHHHHHHcCCCCCcchHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCC
Q 003185          741 LLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPT  820 (840)
Q Consensus       741 LLTG~~PF~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L~dLI~rCL~~DP~eRPS  820 (840)
                      |++|..||.+.+.......+.....+.+..                         ....+..+.+||.+||+.||.+|||
T Consensus       209 ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~li~~~l~~dp~~Rps  263 (297)
T 3fxz_A          209 MIEGEPPYLNENPLRALYLIATNGTPELQN-------------------------PEKLSAIFRDFLNRCLEMDVEKRGS  263 (297)
T ss_dssp             HHHSSCTTTTSCHHHHHHHHHHHCSCCCSC-------------------------GGGSCHHHHHHHHHHSCSSTTTSCC
T ss_pred             HHhCCCCCCCCCHHHHHHHHHhCCCCCCCC-------------------------ccccCHHHHHHHHHHccCChhHCcC
Confidence            999999999888777666655443322210                         1123567899999999999999999


Q ss_pred             HHHHHHHHHhhc
Q 003185          821 AGDLYEMFVART  832 (840)
Q Consensus       821 a~ELLehLe~l~  832 (840)
                      +.|+++|..-..
T Consensus       264 ~~ell~h~~~~~  275 (297)
T 3fxz_A          264 AKELLQHQFLKI  275 (297)
T ss_dssp             HHHHTTCGGGGG
T ss_pred             HHHHhhChhhcc
Confidence            999999865543


No 23 
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00  E-value=1.2e-42  Score=364.65  Aligned_cols=263  Identities=24%  Similarity=0.399  Sum_probs=204.0

Q ss_pred             CCCCCceeeeeecccCceEEEEEEECCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeEEecCC
Q 003185          502 GSFPSLSSCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK  581 (840)
Q Consensus       502 ~~~~~y~i~~~LG~G~fG~Vy~a~~~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~l~g~~~~~~  581 (840)
                      ..+++|++.+.||+|+||.||+|.+.+..+|+|+.........    ....+.+.+|+.+++.++||||+++++++....
T Consensus         4 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~----~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~   79 (271)
T 3dtc_A            4 IDFAELTLEEIIGIGGFGKVYRAFWIGDEVAVKAARHDPDEDI----SQTIENVRQEAKLFAMLKHPNIIALRGVCLKEP   79 (271)
T ss_dssp             CCTTSEEEEEEEEEETTEEEEEEEETTEEEEEEEC--------------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC-
T ss_pred             cchhheeeeeeeccCCCeEEEEEEEcCCeEEEEEEecCCcccH----HHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCC
Confidence            5678999999999999999999999999999999654322211    122234589999999999999999999998665


Q ss_pred             CCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eecccCCCCcE
Q 003185          582 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKH---IMHRDIKSENI  658 (840)
Q Consensus       582 ~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~g---IVHRDLKPeNI  658 (840)
                      .              .++||||+++++|.+++..      ..+++..++.++.||+.||.|||++|   |+||||||+||
T Consensus        80 ~--------------~~lv~e~~~~~~L~~~~~~------~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Ni  139 (271)
T 3dtc_A           80 N--------------LCLVMEFARGGPLNRVLSG------KRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNI  139 (271)
T ss_dssp             ---------------CEEEEECCTTEEHHHHHTS------SCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGE
T ss_pred             c--------------eEEEEEcCCCCCHHHHhhc------CCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHE
Confidence            4              3999999999999999853      57999999999999999999999999   99999999999


Q ss_pred             EEecccccC-CCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHHHH
Q 003185          659 LIDLERKKA-DGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCL  737 (840)
Q Consensus       659 LLd~~~~~~-~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLGvI  737 (840)
                      |++...+.. ...+.+||+|||++........            ....||+.|+|||++.+    ..++.++||||||++
T Consensus       140 l~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~~------------~~~~~~~~y~aPE~~~~----~~~~~~~Di~slG~~  203 (271)
T 3dtc_A          140 LILQKVENGDLSNKILKITDFGLAREWHRTTK------------MSAAGAYAWMAPEVIRA----SMFSKGSDVWSYGVL  203 (271)
T ss_dssp             EESSCCSSSCCSSCCEEECCCCC-------------------------CCGGGSCHHHHHH----CCCSHHHHHHHHHHH
T ss_pred             EEecccccccccCcceEEccCCcccccccccc------------cCCCCccceeCHHHhcc----CCCCchhhHHHHHHH
Confidence            998642211 1236799999999976543211            12368999999999987    668999999999999


Q ss_pred             HHHHHhCCCCCCCCCHHHHHHHHHcCCC-CCcchHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCC
Q 003185          738 LLELLTLQVPYMGLSELEIHDLIQMGKR-PRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPT  816 (840)
Q Consensus       738 L~ELLTG~~PF~~~~~~el~~~I~~~~~-p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L~dLI~rCL~~DP~  816 (840)
                      +|+|++|+.||.+.+.......+..... ..++                           ...++.+.+||.+||..||.
T Consensus       204 l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~li~~~l~~~p~  256 (271)
T 3dtc_A          204 LWELLTGEVPFRGIDGLAVAYGVAMNKLALPIP---------------------------STCPEPFAKLMEDCWNPDPH  256 (271)
T ss_dssp             HHHHHHCCCTTTTSCHHHHHHHHHTSCCCCCCC---------------------------TTCCHHHHHHHHHHTCSSGG
T ss_pred             HHHHHhCCCCCCCCCHHHHHHhhhcCCCCCCCC---------------------------cccCHHHHHHHHHHhcCCcc
Confidence            9999999999998887776666554422 1111                           12245799999999999999


Q ss_pred             CCCCHHHHHHHHHhh
Q 003185          817 ERPTAGDLYEMFVAR  831 (840)
Q Consensus       817 eRPSa~ELLehLe~l  831 (840)
                      +|||+.+++++|+.+
T Consensus       257 ~Rps~~e~l~~L~~l  271 (271)
T 3dtc_A          257 SRPSFTNILDQLTTI  271 (271)
T ss_dssp             GSCCHHHHHHHHHC-
T ss_pred             cCcCHHHHHHHHhcC
Confidence            999999999999864


No 24 
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00  E-value=2.1e-42  Score=376.14  Aligned_cols=268  Identities=20%  Similarity=0.314  Sum_probs=216.0

Q ss_pred             CCCCCceeeeeecccCceEEEEEEEC-----CeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeE
Q 003185          502 GSFPSLSSCDEAGKSVSSSLFRCKFG-----SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGH  576 (840)
Q Consensus       502 ~~~~~y~i~~~LG~G~fG~Vy~a~~~-----~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~l~g~  576 (840)
                      ...++|.+.+.||+|+||.||+|.+.     +..||+|+....   ......+    .+.+|+.+|++++||||++++++
T Consensus        46 ~~~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~----~~~~E~~~l~~l~h~~iv~~~~~  118 (325)
T 3kul_A           46 IEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAG---YTERQRR----DFLSEASIMGQFDHPNIIRLEGV  118 (325)
T ss_dssp             CCGGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTT---CCHHHHH----HHHHHHHHHTTCCCTTBCCEEEE
T ss_pred             cChhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCC---CCHHHHH----HHHHHHHHHHhCCCCCCCcEEEE
Confidence            45678999999999999999999972     345899986432   1233333    44899999999999999999999


Q ss_pred             EecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCCC
Q 003185          577 KISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSE  656 (840)
Q Consensus       577 ~~~~~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKPe  656 (840)
                      +.....              .||||||+++++|.+++..    ....+++..++.|+.||+.||.|||++||+||||||+
T Consensus       119 ~~~~~~--------------~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~  180 (325)
T 3kul_A          119 VTRGRL--------------AMIVTEYMENGSLDTFLRT----HDGQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAAR  180 (325)
T ss_dssp             ECGGGC--------------CEEEEECCTTCBHHHHHHT----TTTCSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGG
T ss_pred             EEeCCc--------------cEEEeeCCCCCcHHHHHHh----cccCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcc
Confidence            976554              3999999999999999964    2356999999999999999999999999999999999


Q ss_pred             cEEEecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHHH
Q 003185          657 NILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGC  736 (840)
Q Consensus       657 NILLd~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLGv  736 (840)
                      ||||+.+       +.+||+|||+++..........       ......+|+.|+|||++.+    ..++.++|||||||
T Consensus       181 NIll~~~-------~~~kl~Dfg~a~~~~~~~~~~~-------~~~~~~~t~~y~aPE~~~~----~~~~~~~Di~slG~  242 (325)
T 3kul_A          181 NVLVDSN-------LVCKVSDFGLSRVLEDDPDAAY-------TTTGGKIPIRWTAPEAIAF----RTFSSASDVWSFGV  242 (325)
T ss_dssp             GEEECTT-------CCEEECCCSSCEECC----CCE-------ECC---CCGGGSCHHHHHH----CEECHHHHHHHHHH
T ss_pred             eEEECCC-------CCEEECCCCcccccccCcccee-------eccCCCCcccccCHhHhcC----CCCCcHHHHHHHHH
Confidence            9999876       5699999999987654321110       0122346789999999986    56899999999999


Q ss_pred             HHHHHHh-CCCCCCCCCHHHHHHHHHcCCCCCcchHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCC
Q 003185          737 LLLELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENP  815 (840)
Q Consensus       737 IL~ELLT-G~~PF~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L~dLI~rCL~~DP  815 (840)
                      +||||++ |..||.+....++...+..+..+..+.                           .++..+.+||.+||..||
T Consensus       243 il~ell~~g~~p~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~l~~li~~~l~~dp  295 (325)
T 3kul_A          243 VMWEVLAYGERPYWNMTNRDVISSVEEGYRLPAPM---------------------------GCPHALHQLMLDCWHKDR  295 (325)
T ss_dssp             HHHHHHTTSCCTTTTSCHHHHHHHHHTTCCCCCCT---------------------------TCCHHHHHHHHHHTCSSG
T ss_pred             HHHHHHcCCCCCcccCCHHHHHHHHHcCCCCCCCC---------------------------CcCHHHHHHHHHHccCCh
Confidence            9999999 999999999888888887764433331                           234579999999999999


Q ss_pred             CCCCCHHHHHHHHHhhcCCCCCCC
Q 003185          816 TERPTAGDLYEMFVARTSSSISSR  839 (840)
Q Consensus       816 ~eRPSa~ELLehLe~l~~~~~s~~  839 (840)
                      .+|||+.+|++.|+.+.....+.+
T Consensus       296 ~~Rps~~eil~~L~~l~~~~~~~~  319 (325)
T 3kul_A          296 AQRPRFSQIVSVLDALIRSPESLR  319 (325)
T ss_dssp             GGSCCHHHHHHHHHHHHHSCC---
T ss_pred             hhCcCHHHHHHHHHHHHhCccccc
Confidence            999999999999999987665543


No 25 
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00  E-value=3.1e-42  Score=382.39  Aligned_cols=265  Identities=22%  Similarity=0.358  Sum_probs=215.0

Q ss_pred             CCCCCceeeeeecccCceEEEEEEEC---------CeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhC-CCCCcc
Q 003185          502 GSFPSLSSCDEAGKSVSSSLFRCKFG---------SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIV  571 (840)
Q Consensus       502 ~~~~~y~i~~~LG~G~fG~Vy~a~~~---------~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L-~HpNIV  571 (840)
                      ...++|++.+.||+|+||.||+|.+.         +..||+|+....   ......+    .+.+|+.+|+++ +||||+
T Consensus        78 ~~~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~----~~~~E~~~l~~l~~hpnIv  150 (370)
T 2psq_A           78 FPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD---ATEKDLS----DLVSEMEMMKMIGKHKNII  150 (370)
T ss_dssp             CCGGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTT---CBHHHHH----HHHHHHHHHHHSCCCTTBC
T ss_pred             ccHHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCC---cCHHHHH----HHHHHHHHHHHhcCCCCEe
Confidence            34578999999999999999999862         245888885322   2223333    449999999999 899999


Q ss_pred             eeeeEEecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhc-----------cCCCCCCHHHHHHHHHHHHHHH
Q 003185          572 EMYGHKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSE-----------TGEKHVSVKLALFIAQDVAAAL  640 (840)
Q Consensus       572 ~l~g~~~~~~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~-----------~~~~~ls~~~~~~Ia~QIa~AL  640 (840)
                      ++++++.....+              ||||||+++|+|.+++.....           .....+++..++.++.||+.||
T Consensus       151 ~~~~~~~~~~~~--------------~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL  216 (370)
T 2psq_A          151 NLLGACTQDGPL--------------YVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGM  216 (370)
T ss_dssp             CEEEEECSSSSC--------------EEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHH
T ss_pred             eEEEEEccCCCE--------------EEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHH
Confidence            999999866544              999999999999999986321           1124588999999999999999


Q ss_pred             HHHHhCCeecccCCCCcEEEecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhccc
Q 003185          641 VELHSKHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMH  720 (840)
Q Consensus       641 ~yLHs~gIVHRDLKPeNILLd~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~  720 (840)
                      .|||++||+||||||+||||+.+       +.+||+|||+++.+......        .......+|+.|+|||++.+  
T Consensus       217 ~~LH~~~ivHrDlkp~NIll~~~-------~~~kl~DFG~a~~~~~~~~~--------~~~~~~~~t~~y~aPE~~~~--  279 (370)
T 2psq_A          217 EYLASQKCIHRDLAARNVLVTEN-------NVMKIADFGLARDINNIDYY--------KKTTNGRLPVKWMAPEALFD--  279 (370)
T ss_dssp             HHHHHTTEECSCCCGGGEEECTT-------CCEEECCCSSCEETTCCCTT--------CTTTTTTSCGGGCCHHHHHT--
T ss_pred             HHHHhCCeeccccchhhEEECCC-------CCEEEccccCCcccCcccce--------ecccCCCcccceECHhHhcC--
Confidence            99999999999999999999877       46999999999866432211        01122357889999999986  


Q ss_pred             CCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHcCCCCCcchHHhhhccCccccccccCCCCCCchhhhhh
Q 003185          721 KPNLYGLEVDIWSYGCLLLELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELET  799 (840)
Q Consensus       721 ~~~~~s~kSDVWSLGvIL~ELLT-G~~PF~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  799 (840)
                        ..++.++|||||||+||||++ |..||.+....++...+..+.++..+.                           .+
T Consensus       280 --~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~  330 (370)
T 2psq_A          280 --RVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPA---------------------------NC  330 (370)
T ss_dssp             --CCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCCCCCCT---------------------------TS
T ss_pred             --CCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcCCCCCCCC---------------------------CC
Confidence              678999999999999999999 999999988888887777765544332                           12


Q ss_pred             HHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhcC
Q 003185          800 LSFLVDVFRRCTEENPTERPTAGDLYEMFVARTS  833 (840)
Q Consensus       800 s~~L~dLI~rCL~~DP~eRPSa~ELLehLe~l~~  833 (840)
                      +..+.+||.+||..||.+|||+.+|+++|+.+..
T Consensus       331 ~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il~  364 (370)
T 2psq_A          331 TNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILT  364 (370)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence            4579999999999999999999999999998764


No 26 
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=1.9e-42  Score=376.50  Aligned_cols=258  Identities=21%  Similarity=0.265  Sum_probs=213.5

Q ss_pred             CCCCceeeeeecccCceEEEEEEE--CCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeEEecC
Q 003185          503 SFPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISS  580 (840)
Q Consensus       503 ~~~~y~i~~~LG~G~fG~Vy~a~~--~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~l~g~~~~~  580 (840)
                      -.++|++.+.||+|+||.||+|.+  .+..+|+|++...     .....    .+.+|+.+|+.++||||+++++++...
T Consensus         3 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~-----~~~~~----~~~~E~~~l~~l~hpnIv~~~~~~~~~   73 (321)
T 1tki_A            3 LYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVK-----GTDQV----LVKKEISILNIARHRNILHLHESFESM   73 (321)
T ss_dssp             CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCC-----THHHH----HHHHHHHHHHHSCCTTBCCEEEEEEET
T ss_pred             hhhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecC-----cccHH----HHHHHHHHHHhCCCCCCCeEeEEEecC
Confidence            357899999999999999999998  4678999986532     12222    348999999999999999999999866


Q ss_pred             CCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCCCcEEE
Q 003185          581 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILI  660 (840)
Q Consensus       581 ~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKPeNILL  660 (840)
                      ..              .++||||++|++|.+++..    ....+++..++.++.||+.||.|||++||+||||||+|||+
T Consensus        74 ~~--------------~~lv~e~~~g~~L~~~l~~----~~~~~~~~~~~~i~~qi~~al~~lH~~givH~Dlkp~NIl~  135 (321)
T 1tki_A           74 EE--------------LVMIFEFISGLDIFERINT----SAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIY  135 (321)
T ss_dssp             TE--------------EEEEECCCCCCBHHHHHTS----SSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE
T ss_pred             CE--------------EEEEEEeCCCCCHHHHHHh----cCCCCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEE
Confidence            53              5999999999999999864    23468999999999999999999999999999999999999


Q ss_pred             ecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHHHHHHH
Q 003185          661 DLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLE  740 (840)
Q Consensus       661 d~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLGvIL~E  740 (840)
                      +.+.     .+.+||+|||++..+......           ....||+.|+|||++.+    ..++.++|||||||++|+
T Consensus       136 ~~~~-----~~~~kl~Dfg~a~~~~~~~~~-----------~~~~gt~~y~aPE~~~~----~~~~~~~DiwslG~il~~  195 (321)
T 1tki_A          136 QTRR-----SSTIKIIEFGQARQLKPGDNF-----------RLLFTAPEYYAPEVHQH----DVVSTATDMWSLGTLVYV  195 (321)
T ss_dssp             SSSS-----CCCEEECCCTTCEECCTTCEE-----------EEEESCGGGSCHHHHTT----CEECHHHHHHHHHHHHHH
T ss_pred             ccCC-----CCCEEEEECCCCeECCCCCcc-----------ccccCChhhcCcHHhcC----CCCCchhhHHHHHHHHHH
Confidence            8642     257999999999876432211           23468999999999986    567899999999999999


Q ss_pred             HHhCCCCCCCCCHHHHHHHHHcCCCCCcchHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCC
Q 003185          741 LLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPT  820 (840)
Q Consensus       741 LLTG~~PF~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L~dLI~rCL~~DP~eRPS  820 (840)
                      |++|..||.+.+..++...+...........                        ....+..+.+||.+||..||.+|||
T Consensus       196 ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~------------------------~~~~s~~~~~li~~~L~~dp~~Rpt  251 (321)
T 1tki_A          196 LLSGINPFLAETNQQIIENIMNAEYTFDEEA------------------------FKEISIEAMDFVDRLLVKERKSRMT  251 (321)
T ss_dssp             HHHSSCTTCCSSHHHHHHHHHHTCCCCCHHH------------------------HTTSCHHHHHHHHTTSCSSGGGSCC
T ss_pred             HHhCCCCCcCCCHHHHHHHHHcCCCCCChhh------------------------hccCCHHHHHHHHHHcCCChhHCcC
Confidence            9999999999988888888877644322211                        1223567999999999999999999


Q ss_pred             HHHHHHHHHhh
Q 003185          821 AGDLYEMFVAR  831 (840)
Q Consensus       821 a~ELLehLe~l  831 (840)
                      +.|+++|.+-.
T Consensus       252 ~~e~l~hp~~~  262 (321)
T 1tki_A          252 ASEALQHPWLK  262 (321)
T ss_dssp             HHHHHHSHHHH
T ss_pred             HHHHhcChhhc
Confidence            99999997644


No 27 
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00  E-value=2.8e-42  Score=362.42  Aligned_cols=259  Identities=21%  Similarity=0.332  Sum_probs=215.5

Q ss_pred             CCCCCceeeeeecccCceEEEEEEE-CCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeEEecC
Q 003185          502 GSFPSLSSCDEAGKSVSSSLFRCKF-GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISS  580 (840)
Q Consensus       502 ~~~~~y~i~~~LG~G~fG~Vy~a~~-~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~l~g~~~~~  580 (840)
                      +..++|++.+.||+|+||.||+|.+ .+..+|+|++....  ..   .+    .+.+|+.++++++||||+++++++...
T Consensus         7 i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~--~~---~~----~~~~E~~~l~~l~h~~i~~~~~~~~~~   77 (269)
T 4hcu_A            7 IDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA--MS---EE----DFIEEAEVMMKLSHPKLVQLYGVCLEQ   77 (269)
T ss_dssp             CCGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTS--BC---HH----HHHHHHHHHHTCCCTTBCCEEEEECSS
T ss_pred             eChhhceeeheecCCCccEEEEEEecCCCeEEEEEecccc--cC---HH----HHHHHHHHHHhCCCCCEeeEEEEEecC
Confidence            4457899999999999999999998 67789999875332  11   12    348999999999999999999998765


Q ss_pred             CCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCCCcEEE
Q 003185          581 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILI  660 (840)
Q Consensus       581 ~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKPeNILL  660 (840)
                      ..              .++||||+++++|.+++..    ....+++..++.++.||+.||.|||++||+||||||+|||+
T Consensus        78 ~~--------------~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~  139 (269)
T 4hcu_A           78 AP--------------ICLVFEFMEHGCLSDYLRT----QRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLV  139 (269)
T ss_dssp             SS--------------EEEEEECCTTCBHHHHHHT----TTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE
T ss_pred             Cc--------------eEEEEEeCCCCcHHHHHHh----cCcccCHHHHHHHHHHHHHHHHHHHhCCeecCCcchheEEE
Confidence            53              4999999999999999975    23568999999999999999999999999999999999999


Q ss_pred             ecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHHHHHHH
Q 003185          661 DLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLE  740 (840)
Q Consensus       661 d~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLGvIL~E  740 (840)
                      +.+       +.+||+|||++..........         .....+|+.|+|||++.+    ..++.++||||||+++|+
T Consensus       140 ~~~-------~~~kl~Dfg~~~~~~~~~~~~---------~~~~~~~~~y~aPE~~~~----~~~~~~~Di~slG~~l~~  199 (269)
T 4hcu_A          140 GEN-------QVIKVSDFGMTRFVLDDQYTS---------STGTKFPVKWASPEVFSF----SRYSSKSDVWSFGVLMWE  199 (269)
T ss_dssp             CGG-------GCEEECCTTGGGGBCCHHHHS---------TTSTTCCGGGCCHHHHHH----CCCCHHHHHHHHHHHHHH
T ss_pred             cCC-------CCEEecccccccccccccccc---------ccCcccccccCCHHHhcC----CCCCchhhhHHHHHHHHH
Confidence            877       459999999998664432111         122357889999999986    668999999999999999


Q ss_pred             HHh-CCCCCCCCCHHHHHHHHHcCCCCCcchHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC
Q 003185          741 LLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP  819 (840)
Q Consensus       741 LLT-G~~PF~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L~dLI~rCL~~DP~eRP  819 (840)
                      |++ |..||.+....++...+.....+..+.                           ..+..+.+|+.+||+.||.+||
T Consensus       200 ll~~g~~p~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~li~~~l~~~p~~Rp  252 (269)
T 4hcu_A          200 VFSEGKIPYENRSNSEVVEDISTGFRLYKPR---------------------------LASTHVYQIMNHCWRERPEDRP  252 (269)
T ss_dssp             HHTTSCCTTTTCCHHHHHHHHHTTCCCCCCT---------------------------TSCHHHHHHHHHHTCSSGGGSC
T ss_pred             HhcCCCCCCCCCCHHHHHHHHhcCccCCCCC---------------------------cCCHHHHHHHHHHccCCcccCc
Confidence            999 999999998888888877664433321                           1245789999999999999999


Q ss_pred             CHHHHHHHHHhhcCC
Q 003185          820 TAGDLYEMFVARTSS  834 (840)
Q Consensus       820 Sa~ELLehLe~l~~~  834 (840)
                      |+.+++++|+.+...
T Consensus       253 s~~~ll~~l~~l~~~  267 (269)
T 4hcu_A          253 AFSRLLRQLAEIAES  267 (269)
T ss_dssp             CHHHHHHHHHHHHHC
T ss_pred             CHHHHHHHHHHHHHc
Confidence            999999999998754


No 28 
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00  E-value=1.8e-42  Score=384.09  Aligned_cols=264  Identities=22%  Similarity=0.266  Sum_probs=214.3

Q ss_pred             CCCceeeeeecccCceEEEEEEE--CCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeEEecCC
Q 003185          504 FPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK  581 (840)
Q Consensus       504 ~~~y~i~~~LG~G~fG~Vy~a~~--~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~l~g~~~~~~  581 (840)
                      -+.|++.+.||+|+||.||+|.+  .+..+|+|++..........  ....+.+.+|+.+|++++||||+++++++....
T Consensus        11 ~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~--~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~   88 (361)
T 2yab_A           11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRR--GVCREEIEREVSILRQVLHPNIITLHDVYENRT   88 (361)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSS--SBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSS
T ss_pred             hhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccc--hhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCC
Confidence            45799999999999999999998  47889999976543322110  011234589999999999999999999998655


Q ss_pred             CCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCCCcEEEe
Q 003185          582 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID  661 (840)
Q Consensus       582 ~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKPeNILLd  661 (840)
                                    ..||||||++||+|.+++..     ...+++..++.++.||+.||.|||++||+||||||+|||++
T Consensus        89 --------------~~~lv~e~~~gg~L~~~l~~-----~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~  149 (361)
T 2yab_A           89 --------------DVVLILELVSGGELFDFLAQ-----KESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLL  149 (361)
T ss_dssp             --------------EEEEEEECCCSCBHHHHHTT-----CSCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEES
T ss_pred             --------------EEEEEEEcCCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEe
Confidence                          35999999999999999964     35799999999999999999999999999999999999998


Q ss_pred             cccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHHHHHHHH
Q 003185          662 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL  741 (840)
Q Consensus       662 ~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLGvIL~EL  741 (840)
                      .++.   ....+||+|||++..+.....           .....||+.|+|||++.+    ..++.++|||||||++|+|
T Consensus       150 ~~~~---~~~~vkl~DFG~a~~~~~~~~-----------~~~~~gt~~y~aPE~~~~----~~~~~~~DiwslGvil~~l  211 (361)
T 2yab_A          150 DKNI---PIPHIKLIDFGLAHEIEDGVE-----------FKNIFGTPEFVAPEIVNY----EPLGLEADMWSIGVITYIL  211 (361)
T ss_dssp             CTTS---SSCCEEECCCSSCEECCTTCC-----------CCCCCSCGGGCCHHHHTT----CCCCTHHHHHHHHHHHHHH
T ss_pred             CCCC---CccCEEEEecCCceEcCCCCc-----------cccCCCCccEECchHHcC----CCCCccccHHHHHHHHHHH
Confidence            6631   123699999999987643211           133469999999999976    6789999999999999999


Q ss_pred             HhCCCCCCCCCHHHHHHHHHcCCCCCcchHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH
Q 003185          742 LTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA  821 (840)
Q Consensus       742 LTG~~PF~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L~dLI~rCL~~DP~eRPSa  821 (840)
                      ++|..||.+.+..+....+........+..                        ....+..+.+||.+||..||.+|||+
T Consensus       212 l~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~------------------------~~~~s~~~~~li~~~L~~dP~~R~t~  267 (361)
T 2yab_A          212 LSGASPFLGDTKQETLANITAVSYDFDEEF------------------------FSQTSELAKDFIRKLLVKETRKRLTI  267 (361)
T ss_dssp             HHSCCSSCCSSHHHHHHHHHTTCCCCCHHH------------------------HTTSCHHHHHHHHHHSCSSTTTSCCH
T ss_pred             HhCCCCCCCCCHHHHHHHHHhcCCCCCchh------------------------ccCCCHHHHHHHHHHCCCChhHCcCH
Confidence            999999999998888888877643222211                        12235679999999999999999999


Q ss_pred             HHHHHHHHh
Q 003185          822 GDLYEMFVA  830 (840)
Q Consensus       822 ~ELLehLe~  830 (840)
                      .|+++|.+-
T Consensus       268 ~e~l~hp~~  276 (361)
T 2yab_A          268 QEALRHPWI  276 (361)
T ss_dssp             HHHHTSTTT
T ss_pred             HHHhcCcCc
Confidence            999998553


No 29 
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00  E-value=6.6e-42  Score=369.36  Aligned_cols=270  Identities=24%  Similarity=0.373  Sum_probs=209.7

Q ss_pred             CCCCCceeeeeecccCceEEEEEEECCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeEEecCC
Q 003185          502 GSFPSLSSCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK  581 (840)
Q Consensus       502 ~~~~~y~i~~~LG~G~fG~Vy~a~~~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~l~g~~~~~~  581 (840)
                      +..++|.+.+.||+|+||.||+|.+.+ .+++|+++  .........+.+    .+|+.++++++||||+++++++....
T Consensus        33 i~~~~~~~~~~lG~G~~g~Vy~~~~~~-~~avk~~k--~~~~~~~~~~~~----~~E~~~l~~l~h~~iv~~~~~~~~~~  105 (307)
T 3lb7_A           33 IEASEVMLSTRIGSGSFGTVYKGKWHG-DVAVKILK--VVDPTPEQFQAF----RNEVAVLRKTRHVNILLFMGYMTKDN  105 (307)
T ss_dssp             CCTTSCCEEEEEEECSSCEEEEEESSS-EEEEEECC--CSSCCHHHHHHH----HHHHHHHTTCCCTTBCCEEEEECSSS
T ss_pred             ecccceEEEeEecCCCCeEEEEEEECC-EEEEEEEe--cCCCCHHHHHHH----HHHHHHHHhCCCCCEEEEEEEEccCc
Confidence            567899999999999999999999865 48888754  333344444444    89999999999999999999875332


Q ss_pred             CCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCCCcEEEe
Q 003185          582 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID  661 (840)
Q Consensus       582 ~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKPeNILLd  661 (840)
                                     .++||||+.+++|.+++..    ....+++..++.|+.||+.||+|||++||+||||||+|||++
T Consensus       106 ---------------~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~  166 (307)
T 3lb7_A          106 ---------------LAIVTQWCEGSSLYKHLHV----QETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLH  166 (307)
T ss_dssp             ---------------CEEEEECCSSCBHHHHHHT----SCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCSSSEEEC
T ss_pred             ---------------EEEEEecCCCCcHHHHHHh----cccCCCHHHHHHHHHHHHHHHHHHHhCCEeeCCCChhhEEEc
Confidence                           3899999999999999974    246799999999999999999999999999999999999998


Q ss_pred             cccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHHHHHHHH
Q 003185          662 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL  741 (840)
Q Consensus       662 ~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLGvIL~EL  741 (840)
                      .+       +.+||+|||+++........        .......||+.|+|||++.... ...++.++|||||||++|||
T Consensus       167 ~~-------~~~kl~DFg~a~~~~~~~~~--------~~~~~~~gt~~y~aPE~~~~~~-~~~~~~~~Di~slG~il~el  230 (307)
T 3lb7_A          167 EG-------LTVKIGDFGLATVKSRWSGS--------QQVEQPTGSVLWMAPEVIRMQD-NNPFSFQSDVYSYGIVLYEL  230 (307)
T ss_dssp             TT-------SCEEECCCCSSCC--------------------CCCCTTSCCHHHHHCCS-SCCCCHHHHHHHHHHHHHHH
T ss_pred             CC-------CCEEEccCCCceeccccccc--------ccccCCCCCcceECcceeeccC-CCCCCchhhHHHHHHHHHHH
Confidence            77       46999999999765432111        1122346999999999997321 25688999999999999999


Q ss_pred             HhCCCCCCCCCHHH-HHHHHHcCCC-CCcchHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC
Q 003185          742 LTLQVPYMGLSELE-IHDLIQMGKR-PRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP  819 (840)
Q Consensus       742 LTG~~PF~~~~~~e-l~~~I~~~~~-p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L~dLI~rCL~~DP~eRP  819 (840)
                      ++|+.||.+....+ +...+..... +.+..                        ....+++.+.+||.+||+.||.+||
T Consensus       231 ltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~~l~~li~~~l~~~p~~RP  286 (307)
T 3lb7_A          231 MTGELPYSHINNRDQIIFMVGRGYASPDLSK------------------------LYKNCPKAMKRLVADCVKKVKEERP  286 (307)
T ss_dssp             HHSSCTTTTCCCHHHHHHHHHHTCCCCCSTT------------------------SCSSSCHHHHHHHHHHSCSSSTTSC
T ss_pred             HhCCCCCccCCcHHHHHHHHhcCCCCcchhh------------------------hhcCCcHHHHHHHHHHhhCChhhCc
Confidence            99999998765444 3444444322 21111                        0112356899999999999999999


Q ss_pred             CHHHHHHHHHhhcCCCCC
Q 003185          820 TAGDLYEMFVARTSSSIS  837 (840)
Q Consensus       820 Sa~ELLehLe~l~~~~~s  837 (840)
                      ++.+|+++|+.+....+.
T Consensus       287 s~~~il~~l~~l~~~~pk  304 (307)
T 3lb7_A          287 LFPQILSSIELLQHSLPK  304 (307)
T ss_dssp             CHHHHHHHHHHHHTTCCC
T ss_pred             CHHHHHHHHHHHHhhccc
Confidence            999999999999877653


No 30 
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00  E-value=5.4e-42  Score=367.11  Aligned_cols=267  Identities=24%  Similarity=0.305  Sum_probs=212.5

Q ss_pred             CCCCceeeeeecccCceEEEEEEE--CCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeEEecC
Q 003185          503 SFPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISS  580 (840)
Q Consensus       503 ~~~~y~i~~~LG~G~fG~Vy~a~~--~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~l~g~~~~~  580 (840)
                      .-++|++.+.||+|+||.||+|.+  .+..+|+|++..... ......    +.+.+|+.++++++||||+++++++...
T Consensus         9 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~----~~~~~e~~~l~~l~hp~iv~~~~~~~~~   83 (294)
T 4eqm_A            9 INERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPR-EKEETL----KRFEREVHNSSQLSHQNIVSMIDVDEED   83 (294)
T ss_dssp             EETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSS-CCHHHH----HHHHHHHHHHTTCCBTTBCCEEEEEECS
T ss_pred             hhccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCcc-ccHHHH----HHHHHHHHHHhcCCCCCCceEEEeeeeC
Confidence            346899999999999999999997  577899998754332 222333    3459999999999999999999998865


Q ss_pred             CCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCCCcEEE
Q 003185          581 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILI  660 (840)
Q Consensus       581 ~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKPeNILL  660 (840)
                      .              ..|+||||++|++|.+++..     ...+++..++.++.||+.||.|||++||+||||||+|||+
T Consensus        84 ~--------------~~~lv~e~~~g~~L~~~l~~-----~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~  144 (294)
T 4eqm_A           84 D--------------CYYLVMEYIEGPTLSEYIES-----HGPLSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILI  144 (294)
T ss_dssp             S--------------EEEEEEECCCSCBHHHHHHH-----HCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE
T ss_pred             C--------------eEEEEEeCCCCCCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEE
Confidence            5              35999999999999999986     2468999999999999999999999999999999999999


Q ss_pred             ecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHHHHHHH
Q 003185          661 DLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLE  740 (840)
Q Consensus       661 d~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLGvIL~E  740 (840)
                      +.+       +.+||+|||++.........         ......||+.|+|||++.+    ..++.++|||||||++|+
T Consensus       145 ~~~-------~~~kl~Dfg~~~~~~~~~~~---------~~~~~~gt~~y~aPE~~~~----~~~~~~~Di~slG~~l~~  204 (294)
T 4eqm_A          145 DSN-------KTLKIFDFGIAKALSETSLT---------QTNHVLGTVQYFSPEQAKG----EATDECTDIYSIGIVLYE  204 (294)
T ss_dssp             CTT-------SCEEECCCSSSTTC----------------------CCSSCCHHHHHT----CCCCTTHHHHHHHHHHHH
T ss_pred             CCC-------CCEEEEeCCCcccccccccc---------ccCccccCccccCHhHhcC----CCCCchHhHHHHHHHHHH
Confidence            877       45999999999866432211         1233469999999999986    667899999999999999


Q ss_pred             HHhCCCCCCCCCHHHHHHHHHcCCCCCcchHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC-
Q 003185          741 LLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP-  819 (840)
Q Consensus       741 LLTG~~PF~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L~dLI~rCL~~DP~eRP-  819 (840)
                      |++|+.||.+.+.............+.....+                       ....++.+.++|.+||..||.+|| 
T Consensus       205 ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~l~~li~~~l~~dp~~R~~  261 (294)
T 4eqm_A          205 MLVGEPPFNGETAVSIAIKHIQDSVPNVTTDV-----------------------RKDIPQSLSNVILRATEKDKANRYK  261 (294)
T ss_dssp             HHHSSCSSCSSCHHHHHHHHHSSCCCCHHHHS-----------------------CTTSCHHHHHHHHHHSCSSGGGSCS
T ss_pred             HHhCCCCCCCCChHHHHHHHhhccCCCcchhc-----------------------ccCCCHHHHHHHHHHhcCCHhHccc
Confidence            99999999998877766555555443332211                       112356799999999999999998 


Q ss_pred             CHHHHHHHHHhhcCCCC
Q 003185          820 TAGDLYEMFVARTSSSI  836 (840)
Q Consensus       820 Sa~ELLehLe~l~~~~~  836 (840)
                      +++++.+.|+.+.....
T Consensus       262 ~~~~l~~~l~~~~~~~~  278 (294)
T 4eqm_A          262 TIQEMKDDLSSVLHENR  278 (294)
T ss_dssp             SHHHHHHHHHTSSSSSS
T ss_pred             cHHHHHHHHHHHHhhcc
Confidence            89999999998875543


No 31 
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00  E-value=5.3e-42  Score=371.89  Aligned_cols=268  Identities=23%  Similarity=0.357  Sum_probs=216.4

Q ss_pred             CCCCCceeeeeecccCceEEEEEEECC-------eeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceee
Q 003185          502 GSFPSLSSCDEAGKSVSSSLFRCKFGS-------ADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMY  574 (840)
Q Consensus       502 ~~~~~y~i~~~LG~G~fG~Vy~a~~~~-------~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~l~  574 (840)
                      ...++|++.+.||+|+||.||+|.+.+       ..||+|+....   ......    ..+.+|+.++++++||||++++
T Consensus        44 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~----~~~~~E~~~l~~l~hp~iv~~~  116 (343)
T 1luf_A           44 YPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEE---ASADMQ----ADFQREAALMAEFDNPNIVKLL  116 (343)
T ss_dssp             CCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTT---CCHHHH----HHHHHHHHHHHTCCCTTBCCEE
T ss_pred             ecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccc---cCHHHH----HHHHHHHHHHHhCCCCCEEEEE
Confidence            456789999999999999999999854       78999986422   122223    3459999999999999999999


Q ss_pred             eEEecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhcc-------------------CCCCCCHHHHHHHHHH
Q 003185          575 GHKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSET-------------------GEKHVSVKLALFIAQD  635 (840)
Q Consensus       575 g~~~~~~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~-------------------~~~~ls~~~~~~Ia~Q  635 (840)
                      +++......              +|||||+++++|.+++......                   ....+++..++.++.|
T Consensus       117 ~~~~~~~~~--------------~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~q  182 (343)
T 1luf_A          117 GVCAVGKPM--------------CLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQ  182 (343)
T ss_dssp             EEECSSSSC--------------EEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHH
T ss_pred             EEEccCCce--------------EEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHH
Confidence            999866543              9999999999999999863211                   1256899999999999


Q ss_pred             HHHHHHHHHhCCeecccCCCCcEEEecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhh
Q 003185          636 VAAALVELHSKHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEV  715 (840)
Q Consensus       636 Ia~AL~yLHs~gIVHRDLKPeNILLd~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEv  715 (840)
                      |+.||.|||++||+||||||+|||++.+       +.+||+|||+++........        .......||+.|+|||+
T Consensus       183 i~~~l~~LH~~~ivH~Dlkp~NIl~~~~-------~~~kl~Dfg~~~~~~~~~~~--------~~~~~~~~t~~y~aPE~  247 (343)
T 1luf_A          183 VAAGMAYLSERKFVHRDLATRNCLVGEN-------MVVKIADFGLSRNIYSADYY--------KADGNDAIPIRWMPPES  247 (343)
T ss_dssp             HHHHHHHHHHTTCCCSCCSGGGEEECGG-------GCEEECCCSCHHHHTGGGCB--------C----CCBCGGGCCHHH
T ss_pred             HHHHHHHHHhCCeecCCCCcceEEECCC-------CeEEEeecCCCcccccCccc--------cccCCCcccceecChhh
Confidence            9999999999999999999999999877       46999999999866432211        01123457899999999


Q ss_pred             hhcccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHcCCCCCcchHHhhhccCccccccccCCCCCCch
Q 003185          716 LRAMHKPNLYGLEVDIWSYGCLLLELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPE  794 (840)
Q Consensus       716 L~~~~~~~~~s~kSDVWSLGvIL~ELLT-G~~PF~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~  794 (840)
                      +.+    ..++.++|||||||++|||++ |..||.+....++...+..+..+.++.                        
T Consensus       248 ~~~----~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~------------------------  299 (343)
T 1luf_A          248 IFY----NRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVRDGNILACPE------------------------  299 (343)
T ss_dssp             HHH----CCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCCCCCT------------------------
T ss_pred             hcc----CCcCcccccHHHHHHHHHHHhcCCCcCCCCChHHHHHHHhCCCcCCCCC------------------------
Confidence            986    568999999999999999999 999999998888888887765443332                        


Q ss_pred             hhhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhcCCCC
Q 003185          795 AELETLSFLVDVFRRCTEENPTERPTAGDLYEMFVARTSSSI  836 (840)
Q Consensus       795 ~~~~~s~~L~dLI~rCL~~DP~eRPSa~ELLehLe~l~~~~~  836 (840)
                         ..+..+.+||.+||..||.+|||+.+|+++|+.+.....
T Consensus       300 ---~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~~~~  338 (343)
T 1luf_A          300 ---NCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCERAE  338 (343)
T ss_dssp             ---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC---
T ss_pred             ---CCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHHhhhh
Confidence               124578999999999999999999999999999876544


No 32 
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00  E-value=5.5e-42  Score=379.52  Aligned_cols=258  Identities=25%  Similarity=0.313  Sum_probs=212.8

Q ss_pred             CCCceeeeeecccCceEEEEEEE--CCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeEEecCC
Q 003185          504 FPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK  581 (840)
Q Consensus       504 ~~~y~i~~~LG~G~fG~Vy~a~~--~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~l~g~~~~~~  581 (840)
                      .++|++.+.||+|+||.||+|.+  .+..+|+|++....  ......+.    +.+|+.++++|+|||||++++++....
T Consensus        28 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~--~~~~~~~~----~~~E~~il~~l~hpnIv~~~~~~~~~~  101 (362)
T 2bdw_A           28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKK--LSARDFQK----LEREARICRKLQHPNIVRLHDSIQEES  101 (362)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTT--CCHHHHHH----HHHHHHHHHHCCCTTBCCEEEEEECSS
T ss_pred             ccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEccc--CCHHHHHH----HHHHHHHHHhCCCCCCCeEEEEEEeCC
Confidence            35799999999999999999998  47789999976442  23333333    489999999999999999999998665


Q ss_pred             CCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCCCcEEEe
Q 003185          582 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID  661 (840)
Q Consensus       582 ~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKPeNILLd  661 (840)
                      .              .|+||||+.||+|.+++..     ...+++..++.++.||+.||.|||++||+||||||+|||++
T Consensus       102 ~--------------~~lv~e~~~gg~L~~~l~~-----~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~NIll~  162 (362)
T 2bdw_A          102 F--------------HYLVFDLVTGGELFEDIVA-----REFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLA  162 (362)
T ss_dssp             E--------------EEEEECCCCSCBHHHHHTT-----CSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEES
T ss_pred             E--------------EEEEEecCCCCCHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEe
Confidence            3              4999999999999999864     35689999999999999999999999999999999999998


Q ss_pred             cccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHHHHHHHH
Q 003185          662 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL  741 (840)
Q Consensus       662 ~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLGvIL~EL  741 (840)
                      .+++    ...+||+|||++........           .....||+.|+|||++.+    ..++.++|||||||++|+|
T Consensus       163 ~~~~----~~~~kl~DfG~a~~~~~~~~-----------~~~~~gt~~y~aPE~~~~----~~~~~~~DiwslG~il~~l  223 (362)
T 2bdw_A          163 SKAK----GAAVKLADFGLAIEVNDSEA-----------WHGFAGTPGYLSPEVLKK----DPYSKPVDIWACGVILYIL  223 (362)
T ss_dssp             CSST----TCCEEECCCTTCBCCTTCCS-----------CCCSCSCTTTCCHHHHTT----CCCCTHHHHHHHHHHHHHH
T ss_pred             cCCC----CCCEEEeecCcceEecCCcc-----------cccCCCCccccCHHHHcc----CCCCchhhHHHHHHHHHHH
Confidence            6531    25699999999976643211           123569999999999976    5789999999999999999


Q ss_pred             HhCCCCCCCCCHHHHHHHHHcCCCCCcchHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH
Q 003185          742 LTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA  821 (840)
Q Consensus       742 LTG~~PF~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L~dLI~rCL~~DP~eRPSa  821 (840)
                      ++|..||.+.+...+...+..+.......                        .....++.+.+||.+||..||.+|||+
T Consensus       224 l~g~~Pf~~~~~~~~~~~i~~~~~~~~~~------------------------~~~~~~~~~~~li~~~L~~dP~~R~t~  279 (362)
T 2bdw_A          224 LVGYPPFWDEDQHRLYAQIKAGAYDYPSP------------------------EWDTVTPEAKSLIDSMLTVNPKKRITA  279 (362)
T ss_dssp             HHSSCSSCCSSHHHHHHHHHHTCCCCCTT------------------------GGGGSCHHHHHHHHHHSCSSGGGSCCH
T ss_pred             HHCCCCCCCCCHHHHHHHHHhCCCCCCcc------------------------cccCCCHHHHHHHHHHcCCChhhCcCH
Confidence            99999999988888888887664321111                        112235679999999999999999999


Q ss_pred             HHHHHHHH
Q 003185          822 GDLYEMFV  829 (840)
Q Consensus       822 ~ELLehLe  829 (840)
                      .++++|.+
T Consensus       280 ~e~l~hp~  287 (362)
T 2bdw_A          280 DQALKVPW  287 (362)
T ss_dssp             HHHTTSHH
T ss_pred             HHHhcCcc
Confidence            99999854


No 33 
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00  E-value=1.9e-42  Score=383.25  Aligned_cols=270  Identities=21%  Similarity=0.326  Sum_probs=218.8

Q ss_pred             CCCCCCceeeeeecccCceEEEEEEEC-------CeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCccee
Q 003185          501 PGSFPSLSSCDEAGKSVSSSLFRCKFG-------SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEM  573 (840)
Q Consensus       501 p~~~~~y~i~~~LG~G~fG~Vy~a~~~-------~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~l  573 (840)
                      ....++|++.+.||+|+||.||+|.+.       +..||+|++.  . .........    +.+|+.++++++|||||++
T Consensus        67 ~~~~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~--~-~~~~~~~~~----~~~E~~~l~~l~hpnIv~~  139 (367)
T 3l9p_A           67 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLP--E-VCSEQDELD----FLMEALIISKFNHQNIVRC  139 (367)
T ss_dssp             BCCGGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECC--S-SCCHHHHHH----HHHHHHHHHHCCCTTBCCE
T ss_pred             hcCHhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecc--c-ccChhhHHH----HHHHHHHHHhCCCCCCCeE
Confidence            356789999999999999999999953       4578999853  2 122333333    4899999999999999999


Q ss_pred             eeEEecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhcc--CCCCCCHHHHHHHHHHHHHHHHHHHhCCeecc
Q 003185          574 YGHKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSET--GEKHVSVKLALFIAQDVAAALVELHSKHIMHR  651 (840)
Q Consensus       574 ~g~~~~~~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~--~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHR  651 (840)
                      ++++......              +|||||+++|+|.+++......  ....+++..++.++.||+.||.|||++||+||
T Consensus       140 ~~~~~~~~~~--------------~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHr  205 (367)
T 3l9p_A          140 IGVSLQSLPR--------------FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHR  205 (367)
T ss_dssp             EEEECSSSSC--------------EEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCS
T ss_pred             EEEEecCCCC--------------EEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhCCeeCC
Confidence            9999866543              9999999999999999874321  22458999999999999999999999999999


Q ss_pred             cCCCCcEEEecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhH
Q 003185          652 DIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDI  731 (840)
Q Consensus       652 DLKPeNILLd~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDV  731 (840)
                      ||||+||||+.++.    ...+||+|||+++.+......        .......||+.|+|||++.+    ..++.++||
T Consensus       206 Dlkp~NIll~~~~~----~~~~kL~DFG~a~~~~~~~~~--------~~~~~~~~t~~y~aPE~~~~----~~~~~~~Dv  269 (367)
T 3l9p_A          206 DIAARNCLLTCPGP----GRVAKIGDFGMARDIYRAGYY--------RKGGCAMLPVKWMPPEAFME----GIFTSKTDT  269 (367)
T ss_dssp             CCCGGGEEESCSST----TCCEEECCCHHHHHHHHHSSC--------TTCCGGGSCGGGCCHHHHHH----CCCCHHHHH
T ss_pred             CCChhhEEEecCCC----CceEEECCCcccccccccccc--------ccCCCcCCcccEECHHHhcC----CCCCcHHHH
Confidence            99999999986532    256999999999865432211        11233468999999999987    678999999


Q ss_pred             HHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHcCCCCCcchHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHh
Q 003185          732 WSYGCLLLELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRC  810 (840)
Q Consensus       732 WSLGvIL~ELLT-G~~PF~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L~dLI~rC  810 (840)
                      |||||+||||++ |..||.+....++...+..+..+..+.                           ..+..+.+||.+|
T Consensus       270 wslG~il~ellt~g~~pf~~~~~~~~~~~i~~~~~~~~~~---------------------------~~~~~l~~li~~~  322 (367)
T 3l9p_A          270 WSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPK---------------------------NCPGPVYRIMTQC  322 (367)
T ss_dssp             HHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTCCCCCCT---------------------------TCCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCc---------------------------cCCHHHHHHHHHH
Confidence            999999999998 999999999988888887765443332                           1245789999999


Q ss_pred             cccCCCCCCCHHHHHHHHHhhcCC
Q 003185          811 TEENPTERPTAGDLYEMFVARTSS  834 (840)
Q Consensus       811 L~~DP~eRPSa~ELLehLe~l~~~  834 (840)
                      |+.||.+|||+.+|+++|+.+...
T Consensus       323 l~~dP~~Rps~~eil~~l~~~~~~  346 (367)
T 3l9p_A          323 WQHQPEDRPNFAIILERIEYCTQD  346 (367)
T ss_dssp             TCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred             cCCCHhHCcCHHHHHHHHHHHhhC
Confidence            999999999999999999988653


No 34 
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00  E-value=3.9e-42  Score=379.67  Aligned_cols=258  Identities=21%  Similarity=0.300  Sum_probs=206.2

Q ss_pred             CCCCCceeeeeecccCceEEEEEEE--CCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeEEec
Q 003185          502 GSFPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKIS  579 (840)
Q Consensus       502 ~~~~~y~i~~~LG~G~fG~Vy~a~~--~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~l~g~~~~  579 (840)
                      ...++|++.+.||+|+||.||+|.+  .+..||+|++......   ....    .+.+|+.+|++++||||+++++++..
T Consensus         7 ~l~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~---~~~~----~~~~Ei~~l~~l~hpnIv~l~~~~~~   79 (347)
T 3zgw_A            7 ELLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLG---SDLP----RIKTEIEALKNLRHQHICQLYHVLET   79 (347)
T ss_dssp             TTTTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC------CC----HHHHHHHHHHTCCCTTBCCEEEEEEC
T ss_pred             HHhcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccc---hHHH----HHHHHHHHHHhCCCCCEeeEEEEEEe
Confidence            4568899999999999999999997  6789999997543321   1222    34899999999999999999999986


Q ss_pred             CCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCCCcEE
Q 003185          580 SKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENIL  659 (840)
Q Consensus       580 ~~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKPeNIL  659 (840)
                      ...              .++||||+++|+|.+++..     ...+++..++.++.||+.||.|||++||+||||||+|||
T Consensus        80 ~~~--------------~~lv~E~~~gg~L~~~l~~-----~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIl  140 (347)
T 3zgw_A           80 ANK--------------IFMVLEYCPGGELFDYIIS-----QDRLSEEETRVVFRQIVSAVAYVHSQGYAHRDLKPENLL  140 (347)
T ss_dssp             SSE--------------EEEEEECCTTCBHHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEE
T ss_pred             CCE--------------EEEEEeCCCCCCHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCccHHHEE
Confidence            553              5999999999999999976     246999999999999999999999999999999999999


Q ss_pred             EecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHHHHHH
Q 003185          660 IDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLL  739 (840)
Q Consensus       660 Ld~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLGvIL~  739 (840)
                      ++.+       +.+||+|||++.........         ......||+.|+|||++.+   ...++.++|||||||+||
T Consensus       141 l~~~-------~~~kL~DFG~a~~~~~~~~~---------~~~~~~gt~~y~aPE~~~~---~~~~~~~~DiwSlG~il~  201 (347)
T 3zgw_A          141 FDEY-------HKLKLIDFGLCAKPKGNKDY---------HLQTCCGSLAYAAPELIQG---KSYLGSEADVWSMGILLY  201 (347)
T ss_dssp             ECTT-------SCEEECCCTTCBC-----------------------CGGGCCHHHHTT---C---CCHHHHHHHHHHHH
T ss_pred             EcCC-------CCEEEEeccCcccccCCCCc---------cccccCCccCccCHHHHcC---CCCCCcHhHHHHHHHHHH
Confidence            9876       45999999998765432111         1233569999999999986   233488999999999999


Q ss_pred             HHHhCCCCCCCCCHHHHHHHHHcCCCCCcchHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC
Q 003185          740 ELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP  819 (840)
Q Consensus       740 ELLTG~~PF~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L~dLI~rCL~~DP~eRP  819 (840)
                      +|++|..||.+.+..++...+..+... ++.                           ..++.+.+||.+||..||.+||
T Consensus       202 ell~g~~Pf~~~~~~~~~~~i~~~~~~-~p~---------------------------~~s~~~~~li~~~L~~dP~~Rp  253 (347)
T 3zgw_A          202 VLMCGFLPFDDDNVMALYKKIMRGKYD-VPK---------------------------WLSPSSILLLQQMLQVDPKKRI  253 (347)
T ss_dssp             HHHHSSCSSCCSSHHHHHHHHHHTCCC-CCT---------------------------TCCHHHHHHHHHHTCSSGGGSC
T ss_pred             HHHHCCCCCCCCCHHHHHHHHHcCCCC-CCC---------------------------CCCHHHHHHHHHHcccCHhHCc
Confidence            999999999999888888888766432 111                           1245788999999999999999


Q ss_pred             CHHHHHHHHHhhc
Q 003185          820 TAGDLYEMFVART  832 (840)
Q Consensus       820 Sa~ELLehLe~l~  832 (840)
                      |++||++|.+-..
T Consensus       254 s~~eil~hp~~~~  266 (347)
T 3zgw_A          254 SMKNLLNHPWIMQ  266 (347)
T ss_dssp             CHHHHHTCHHHHT
T ss_pred             CHHHHhcCcchhc
Confidence            9999999976543


No 35 
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00  E-value=4.6e-42  Score=358.55  Aligned_cols=261  Identities=22%  Similarity=0.348  Sum_probs=212.0

Q ss_pred             CCCCCceeeeeecccCceEEEEEEECCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeEEecCC
Q 003185          502 GSFPSLSSCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK  581 (840)
Q Consensus       502 ~~~~~y~i~~~LG~G~fG~Vy~a~~~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~l~g~~~~~~  581 (840)
                      +.+++|++.+.||+|+||.||+|.+.+..+|+|++...  .......+.    +.+|+.++++++||||+++++++....
T Consensus         7 i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~avK~~~~~--~~~~~~~~~----~~~E~~~l~~l~h~~iv~~~~~~~~~~   80 (271)
T 3kmu_A            7 IDFKQLNFLTKLNENHSGELWKGRWQGNDIVVKVLKVR--DWSTRKSRD----FNEECPRLRIFSHPNVLPVLGACQSPP   80 (271)
T ss_dssp             CCGGGCEEEEEEEEETTEEEEEEEETTEEEEEEEECCT--TCCHHHHHH----HHHHGGGGCCCSCTTEECEEEEECTTT
T ss_pred             CCHHHhHHHHHhcCCCcceEEEEEECCeeEEEEEeccc--ccCHHHHHH----HHHHHHHHHhcCCCchhheEEEEccCC
Confidence            67889999999999999999999999999999997543  223333333    499999999999999999999987652


Q ss_pred             CCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCC--eecccCCCCcEE
Q 003185          582 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKH--IMHRDIKSENIL  659 (840)
Q Consensus       582 ~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~g--IVHRDLKPeNIL  659 (840)
                      .            ...++||||+++|+|.+++..   .....+++..++.++.||+.||.|||++|  |+||||||+|||
T Consensus        81 ~------------~~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~~i~H~dikp~Nil  145 (271)
T 3kmu_A           81 A------------PHPTLITHWMPYGSLYNVLHE---GTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVM  145 (271)
T ss_dssp             S------------SSCEEEEECCTTCBHHHHHHS---CSSCCCCHHHHHHHHHHHHHHHHHHTTSSSCCTTCCCSGGGEE
T ss_pred             C------------CCeEeeecccCCCcHHHHHhh---cccCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCccceEE
Confidence            1            135999999999999999975   22235899999999999999999999999  999999999999


Q ss_pred             EecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHHHHHH
Q 003185          660 IDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLL  739 (840)
Q Consensus       660 Ld~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLGvIL~  739 (840)
                      ++.+       +.++|+|||++.....               ....||+.|+|||++.+.. ...++.++|||||||++|
T Consensus       146 ~~~~-------~~~~l~~~~~~~~~~~---------------~~~~~t~~y~aPE~~~~~~-~~~~~~~~Di~slG~il~  202 (271)
T 3kmu_A          146 IDED-------MTARISMADVKFSFQS---------------PGRMYAPAWVAPEALQKKP-EDTNRRSADMWSFAVLLW  202 (271)
T ss_dssp             ECTT-------SCEEEEGGGSCCTTSC---------------TTCBSCGGGSCHHHHHSCG-GGSCHHHHHHHHHHHHHH
T ss_pred             EcCC-------cceeEEeccceeeecc---------------cCccCCccccChhhhccCC-CCCCCchhhHHHHHHHHH
Confidence            9877       4589988887654221               2236899999999998621 123445899999999999


Q ss_pred             HHHhCCCCCCCCCHHHHHHHHHcC-CCCCcchHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCC
Q 003185          740 ELLTLQVPYMGLSELEIHDLIQMG-KRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTER  818 (840)
Q Consensus       740 ELLTG~~PF~~~~~~el~~~I~~~-~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L~dLI~rCL~~DP~eR  818 (840)
                      ||++|+.||.+.+..+....+... ..+.++.                           ..+..+.+||.+||+.||.+|
T Consensus       203 el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~li~~~l~~~p~~R  255 (271)
T 3kmu_A          203 ELVTREVPFADLSNMEIGMKVALEGLRPTIPP---------------------------GISPHVSKLMKICMNEDPAKR  255 (271)
T ss_dssp             HHHHCSCTTTTSCHHHHHHHHHHSCCCCCCCT---------------------------TCCHHHHHHHHHHTCSSGGGS
T ss_pred             HHHhCCCCccccChHHHHHHHHhcCCCCCCCC---------------------------CCCHHHHHHHHHHcCCChhhC
Confidence            999999999988877776555443 3333321                           124579999999999999999


Q ss_pred             CCHHHHHHHHHhhcC
Q 003185          819 PTAGDLYEMFVARTS  833 (840)
Q Consensus       819 PSa~ELLehLe~l~~  833 (840)
                      ||+.++++.|+.+..
T Consensus       256 ps~~~il~~L~~l~~  270 (271)
T 3kmu_A          256 PKFDMIVPILEKMQD  270 (271)
T ss_dssp             CCHHHHHHHHHHHCC
T ss_pred             cCHHHHHHHHHHhhc
Confidence            999999999998764


No 36 
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00  E-value=5.9e-42  Score=371.47  Aligned_cols=270  Identities=22%  Similarity=0.284  Sum_probs=208.5

Q ss_pred             CCCCCceeeeeecccCceEEEEEEECCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeEEecCC
Q 003185          502 GSFPSLSSCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK  581 (840)
Q Consensus       502 ~~~~~y~i~~~LG~G~fG~Vy~a~~~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~l~g~~~~~~  581 (840)
                      ...++|++.+.||+|+||.||+|++.+..||+|++....     ....    ...+|+.+|++++|||||++++++....
T Consensus        21 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~-----~~~~----~~~~E~~~l~~l~hpniv~~~~~~~~~~   91 (322)
T 3soc_A           21 FQSMPLQLLEVKARGRFGCVWKAQLLNEYVAVKIFPIQD-----KQSW----QNEYEVYSLPGMKHENILQFIGAEKRGT   91 (322)
T ss_dssp             ETTEEEEEEEEEECSTTCEEEEEEETTEEEEEEEECGGG-----HHHH----HHHHHHHTSTTCCCTTBCCEEEEEEEEC
T ss_pred             cchhhchhhheecccCceEEEEEEECCCEEEEEEeecCc-----hHHH----HHHHHHHHHhcCCCCCchhhcceeccCC
Confidence            456789999999999999999999999999999975331     1222    2367999999999999999999998654


Q ss_pred             CCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhC----------Ceecc
Q 003185          582 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSK----------HIMHR  651 (840)
Q Consensus       582 ~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~----------gIVHR  651 (840)
                      ..          ....++||||+++|+|.+++..      ..+++..++.++.||+.||.|||+.          ||+||
T Consensus        92 ~~----------~~~~~lv~e~~~~g~L~~~l~~------~~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~  155 (322)
T 3soc_A           92 SV----------DVDLWLITAFHEKGSLSDFLKA------NVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHR  155 (322)
T ss_dssp             SS----------SEEEEEEEECCTTCBHHHHHHH------CCBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECS
T ss_pred             CC----------CceEEEEEecCCCCCHHHHHHh------cCCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeC
Confidence            21          2357999999999999999976      4599999999999999999999999          99999


Q ss_pred             cCCCCcEEEecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccC-CCCCCchhh
Q 003185          652 DIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHK-PNLYGLEVD  730 (840)
Q Consensus       652 DLKPeNILLd~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~-~~~~s~kSD  730 (840)
                      ||||+|||++.+       +.+||+|||+++.+......        .......||+.|+|||++.+... ...++.++|
T Consensus       156 Dlkp~Nill~~~-------~~~kL~DFg~a~~~~~~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~D  220 (322)
T 3soc_A          156 DIKSKNVLLKNN-------LTACIADFGLALKFEAGKSA--------GDTHGQVGTRRYMAPEVLEGAINFQRDAFLRID  220 (322)
T ss_dssp             CCSGGGEEECTT-------CCEEECCCTTCEEECTTSCC--------CCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHH
T ss_pred             CCChHhEEECCC-------CeEEEccCCcccccccccCc--------cccccCccCccccCHhhcccccccCcCCCccch
Confidence            999999999877       56999999999876543211        11233569999999999975211 124567899


Q ss_pred             HHHHHHHHHHHHhCCCCCCCCCHH----------------HHHHHHHcC-CCCCcchHHhhhccCccccccccCCCCCCc
Q 003185          731 IWSYGCLLLELLTLQVPYMGLSEL----------------EIHDLIQMG-KRPRLTDELEALGSCHEHEVAQSGSGFEKP  793 (840)
Q Consensus       731 VWSLGvIL~ELLTG~~PF~~~~~~----------------el~~~I~~~-~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~  793 (840)
                      ||||||++|||+||+.||.+....                .+...+... ..+.++.                      .
T Consensus       221 iwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------~  278 (322)
T 3soc_A          221 MYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHPSLEDMQEVVVHKKKRPVLRD----------------------Y  278 (322)
T ss_dssp             HHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCG----------------------G
T ss_pred             hHHHHHHHHHHHhCCCCCCCCcchhccchhhhhccCCchhhhhhhhhcccCCCCccc----------------------c
Confidence            999999999999999999764221                111111111 1111111                      1


Q ss_pred             hhhhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhcC
Q 003185          794 EAELETLSFLVDVFRRCTEENPTERPTAGDLYEMFVARTS  833 (840)
Q Consensus       794 ~~~~~~s~~L~dLI~rCL~~DP~eRPSa~ELLehLe~l~~  833 (840)
                      ......+..+.+||.+||+.||.+|||+.+|++.|+.+..
T Consensus       279 ~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~  318 (322)
T 3soc_A          279 WQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQR  318 (322)
T ss_dssp             GGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             ccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence            1122345679999999999999999999999999998864


No 37 
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00  E-value=9.7e-42  Score=363.05  Aligned_cols=282  Identities=20%  Similarity=0.237  Sum_probs=208.7

Q ss_pred             CCCceeeeeecccCceEEEEEEE--CCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeEEecCC
Q 003185          504 FPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK  581 (840)
Q Consensus       504 ~~~y~i~~~LG~G~fG~Vy~a~~--~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~l~g~~~~~~  581 (840)
                      +++|++.+.||+|+||+||+|.+  .+..+|+|++.....  ......    .+.+|+.++++++||||+++++++....
T Consensus         1 l~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~----~~~~E~~~l~~l~h~~iv~~~~~~~~~~   74 (292)
T 3o0g_A            1 MQKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDD--DEGVPS----SALREICLLKELKHKNIVRLHDVLHSDK   74 (292)
T ss_dssp             CCSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCS--STTHHH----HHHHHHHHHTTCCCTTBCCEEEEEEETT
T ss_pred             CCCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCC--cCCcch----HHHHHHHHHhcCCCCCEeeEEeEEEeCC
Confidence            47899999999999999999998  567899999765432  222222    3489999999999999999999998665


Q ss_pred             CCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCCCcEEEe
Q 003185          582 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID  661 (840)
Q Consensus       582 ~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKPeNILLd  661 (840)
                      .              .+|||||+.+ +|.+++..    ....+++..++.++.||+.||+|||++||+||||||+|||++
T Consensus        75 ~--------------~~lv~e~~~~-~l~~~~~~----~~~~l~~~~~~~~~~ql~~~l~~lH~~~ivH~dikp~Nil~~  135 (292)
T 3o0g_A           75 K--------------LTLVFEFCDQ-DLKKYFDS----CNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLIN  135 (292)
T ss_dssp             E--------------EEEEEECCSE-EHHHHHHH----TTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC
T ss_pred             E--------------EEEEEecCCC-CHHHHHHh----CCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEc
Confidence            3              5999999985 77777654    235799999999999999999999999999999999999998


Q ss_pred             cccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHHHHHHHH
Q 003185          662 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL  741 (840)
Q Consensus       662 ~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLGvIL~EL  741 (840)
                      .+       +.+||+|||+++........          .....||+.|+|||++.+   ...++.++|||||||++|+|
T Consensus       136 ~~-------~~~kl~Dfg~~~~~~~~~~~----------~~~~~~t~~y~aPE~~~~---~~~~~~~~DiwslG~il~~l  195 (292)
T 3o0g_A          136 RN-------GELKLANFGLARAFGIPVRC----------YSAEVVTLWYRPPDVLFG---AKLYSTSIDMWSAGCIFAEL  195 (292)
T ss_dssp             TT-------SCEEECCCTTCEECCSCCSC----------CCSCCSCGGGCCHHHHTT---CSCCCTHHHHHHHHHHHHHH
T ss_pred             CC-------CCEEEeecccceecCCcccc----------ccCCccccCCcChHHHcC---CCCcCchHHHHHHHHHHHHH
Confidence            77       45999999999866432111          233468999999999975   23479999999999999999


Q ss_pred             HhCCCC-CCCCCHHHHHHHHHcCCCCCcchHHhhhccCccc-cccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC
Q 003185          742 LTLQVP-YMGLSELEIHDLIQMGKRPRLTDELEALGSCHEH-EVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP  819 (840)
Q Consensus       742 LTG~~P-F~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~s~~L~dLI~rCL~~DP~eRP  819 (840)
                      ++|..| |.+.+..+....+...........+......... ..................+..+.+||.+||+.||.+||
T Consensus       196 ~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~  275 (292)
T 3o0g_A          196 ANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRI  275 (292)
T ss_dssp             TTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSC
T ss_pred             HHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhhcccccccccccccCCcchhhcccccChHHHHHHHHHhccChhhCC
Confidence            988877 5666666666665543211111111111100000 00000011111122234567899999999999999999


Q ss_pred             CHHHHHHHHHh
Q 003185          820 TAGDLYEMFVA  830 (840)
Q Consensus       820 Sa~ELLehLe~  830 (840)
                      |++|+++|.+-
T Consensus       276 t~~e~l~hp~f  286 (292)
T 3o0g_A          276 SAEEALQHPYF  286 (292)
T ss_dssp             CHHHHHTSGGG
T ss_pred             CHHHHhcCccc
Confidence            99999998654


No 38 
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00  E-value=9.2e-42  Score=357.86  Aligned_cols=258  Identities=22%  Similarity=0.291  Sum_probs=212.8

Q ss_pred             CCCCCceeeeeecccCceEEEEEEEC-CeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeEEecC
Q 003185          502 GSFPSLSSCDEAGKSVSSSLFRCKFG-SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISS  580 (840)
Q Consensus       502 ~~~~~y~i~~~LG~G~fG~Vy~a~~~-~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~l~g~~~~~  580 (840)
                      ...++|++.+.||+|+||.||+|.+. +..+|+|++....  ..   .+.    +.+|+.++++++||||+++++++...
T Consensus         5 l~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~--~~---~~~----~~~E~~~l~~l~h~~i~~~~~~~~~~   75 (268)
T 3sxs_A            5 LKREEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGS--MS---EDE----FFQEAQTMMKLSHPKLVKFYGVCSKE   75 (268)
T ss_dssp             CCGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTT--BC---HHH----HHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred             echhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCC--Cc---HHH----HHHHHHHHHhCCCCCEeeEEEEEccC
Confidence            34578999999999999999999985 4579999875332  11   122    48999999999999999999998765


Q ss_pred             CCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCCCcEEE
Q 003185          581 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILI  660 (840)
Q Consensus       581 ~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKPeNILL  660 (840)
                      ..              .++||||+++++|.+++...    ...+++..++.++.||+.||.|||++||+||||||+|||+
T Consensus        76 ~~--------------~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~  137 (268)
T 3sxs_A           76 YP--------------IYIVTEYISNGCLLNYLRSH----GKGLEPSQLLEMCYDVCEGMAFLESHQFIHRDLAARNCLV  137 (268)
T ss_dssp             SS--------------EEEEEECCTTCBHHHHHHHH----GGGCCHHHHHHHHHHHHHHHHHHHHTTEEESSCSGGGEEE
T ss_pred             Cc--------------eEEEEEccCCCcHHHHHHHc----CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCcceEEE
Confidence            43              49999999999999999762    2458999999999999999999999999999999999999


Q ss_pred             ecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHHHHHHH
Q 003185          661 DLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLE  740 (840)
Q Consensus       661 d~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLGvIL~E  740 (840)
                      +.+       +.+||+|||++..........         .....+|+.|+|||++.+    ..++.++||||||+++|+
T Consensus       138 ~~~-------~~~~l~Dfg~~~~~~~~~~~~---------~~~~~~~~~y~aPE~~~~----~~~~~~~Di~slG~il~~  197 (268)
T 3sxs_A          138 DRD-------LCVKVSDFGMTRYVLDDQYVS---------SVGTKFPVKWSAPEVFHY----FKYSSKSDVWAFGILMWE  197 (268)
T ss_dssp             CTT-------CCEEECCTTCEEECCTTCEEE---------CCSCCCCGGGCCHHHHHH----SEEETTHHHHHHHHHHHH
T ss_pred             CCC-------CCEEEccCccceecchhhhhc---------ccCCCcCcccCCHHHHhc----cCCchhhhhHHHHHHHHH
Confidence            877       469999999998664432211         122346788999999986    567899999999999999


Q ss_pred             HHh-CCCCCCCCCHHHHHHHHHcCCCCCcchHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC
Q 003185          741 LLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP  819 (840)
Q Consensus       741 LLT-G~~PF~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L~dLI~rCL~~DP~eRP  819 (840)
                      |++ |..||......+....+.....+..+..                           .++.+.+||.+||+.||.+||
T Consensus       198 l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~l~~li~~~l~~~p~~Rp  250 (268)
T 3sxs_A          198 VFSLGKMPYDLYTNSEVVLKVSQGHRLYRPHL---------------------------ASDTIYQIMYSCWHELPEKRP  250 (268)
T ss_dssp             HHTTTCCTTTTSCHHHHHHHHHTTCCCCCCTT---------------------------SCHHHHHHHHHTTCSSGGGSC
T ss_pred             HHcCCCCCccccChHHHHHHHHcCCCCCCCCc---------------------------ChHHHHHHHHHHcCCChhhCc
Confidence            999 9999999888888777776644332211                           244789999999999999999


Q ss_pred             CHHHHHHHHHhhcC
Q 003185          820 TAGDLYEMFVARTS  833 (840)
Q Consensus       820 Sa~ELLehLe~l~~  833 (840)
                      |+.+++++|+.+..
T Consensus       251 s~~~ll~~L~~l~~  264 (268)
T 3sxs_A          251 TFQQLLSSIEPLRE  264 (268)
T ss_dssp             CHHHHHHHHGGGCC
T ss_pred             CHHHHHHHHHHhhh
Confidence            99999999999865


No 39 
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00  E-value=9.9e-42  Score=388.62  Aligned_cols=259  Identities=25%  Similarity=0.302  Sum_probs=211.6

Q ss_pred             CCCceeeeeecccCceEEEEEEE--CCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeEEecCC
Q 003185          504 FPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK  581 (840)
Q Consensus       504 ~~~y~i~~~LG~G~fG~Vy~a~~--~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~l~g~~~~~~  581 (840)
                      .++|++.+.||+|+||.||+|.+  .+..+|+|++..+.  ......    +.+.+|+.+|+.|+|||||++++++....
T Consensus        10 ~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~--~~~~~~----~~~~~E~~il~~l~hpnIv~l~~~~~~~~   83 (444)
T 3soa_A           10 TEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKK--LSARDH----QKLEREARICRLLKHPNIVRLHDSISEEG   83 (444)
T ss_dssp             HHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCS--CHHHHH----HHHHHHHHHHHHCCBTTBCCEEEEEECSS
T ss_pred             cCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEccc--CCHHHH----HHHHHHHHHHHhCCCcCCCeEEEEEEECC
Confidence            36799999999999999999987  67889999876442  222222    34589999999999999999999998665


Q ss_pred             CCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCCCcEEEe
Q 003185          582 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID  661 (840)
Q Consensus       582 ~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKPeNILLd  661 (840)
                      .              .||||||+.||+|.+++..     ...+++..+..++.||+.||.|||++||+||||||+|||++
T Consensus        84 ~--------------~~lv~E~~~gg~L~~~i~~-----~~~~~e~~~~~i~~qil~aL~~lH~~givHrDlKp~NIll~  144 (444)
T 3soa_A           84 H--------------HYLIFDLVTGGELFEDIVA-----REYYSEADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLA  144 (444)
T ss_dssp             E--------------EEEEECCCBCCBHHHHHHH-----CSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSSTTEEES
T ss_pred             E--------------EEEEEEeCCCCCHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEe
Confidence            3              5999999999999999986     35699999999999999999999999999999999999998


Q ss_pred             cccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHHHHHHHH
Q 003185          662 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL  741 (840)
Q Consensus       662 ~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLGvIL~EL  741 (840)
                      .+.    ..+.+||+|||++.........          .....||+.|+|||++.+    ..++.++|||||||++|+|
T Consensus       145 ~~~----~~~~vkL~DFG~a~~~~~~~~~----------~~~~~gt~~Y~APE~l~~----~~~~~~~DIwSlGvilyel  206 (444)
T 3soa_A          145 SKL----KGAAVKLADFGLAIEVEGEQQA----------WFGFAGTPGYLSPEVLRK----DPYGKPVDLWACGVILYIL  206 (444)
T ss_dssp             BSS----TTCCEEECCCSSCBCCCTTCCB----------CCCSCSCGGGCCHHHHTT----CCBCTHHHHHHHHHHHHHH
T ss_pred             ccC----CCCcEEEccCceeEEecCCCce----------eecccCCcccCCHHHhcC----CCCCCccccHHHHHHHHHH
Confidence            542    1257999999999766432211          123569999999999976    5789999999999999999


Q ss_pred             HhCCCCCCCCCHHHHHHHHHcCCCCCcchHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH
Q 003185          742 LTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA  821 (840)
Q Consensus       742 LTG~~PF~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L~dLI~rCL~~DP~eRPSa  821 (840)
                      ++|..||.+.+..++...+..+........                        ....++.+.+||.+||..||.+|||+
T Consensus       207 l~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~------------------------~~~~s~~~~~li~~~L~~dP~~Rpta  262 (444)
T 3soa_A          207 LVGYPPFWDEDQHRLYQQIKAGAYDFPSPE------------------------WDTVTPEAKDLINKMLTINPSKRITA  262 (444)
T ss_dssp             HHSSCSCCCSSHHHHHHHHHHTCCCCCTTT------------------------TTTSCHHHHHHHHHHSCSSTTTSCCH
T ss_pred             HhCCCCCCCccHHHHHHHHHhCCCCCCccc------------------------cccCCHHHHHHHHHHcCCChhHCCCH
Confidence            999999999998888888877643221111                        11235679999999999999999999


Q ss_pred             HHHHHHHH
Q 003185          822 GDLYEMFV  829 (840)
Q Consensus       822 ~ELLehLe  829 (840)
                      .|+++|.+
T Consensus       263 ~e~L~hp~  270 (444)
T 3soa_A          263 AEALKHPW  270 (444)
T ss_dssp             HHHHHSCT
T ss_pred             HHHhcCcc
Confidence            99999854


No 40 
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00  E-value=1.4e-41  Score=369.86  Aligned_cols=263  Identities=22%  Similarity=0.283  Sum_probs=212.0

Q ss_pred             CCceeeeeecccCceEEEEEEE--CCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeEEecCCC
Q 003185          505 PSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW  582 (840)
Q Consensus       505 ~~y~i~~~LG~G~fG~Vy~a~~--~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~l~g~~~~~~~  582 (840)
                      +.|.+.+.||+|+||.||+|.+  .+..+|+|++..........  ....+.+.+|+.+|++++||||+++++++.... 
T Consensus        11 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~--~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-   87 (326)
T 2y0a_A           11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRR--GVSREDIEREVSILKEIQHPNVITLHEVYENKT-   87 (326)
T ss_dssp             HHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSS--SBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS-
T ss_pred             cceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccc--hhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCC-
Confidence            5699999999999999999998  47889999976543322111  001223489999999999999999999998654 


Q ss_pred             CCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCCCcEEEec
Q 003185          583 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL  662 (840)
Q Consensus       583 ~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKPeNILLd~  662 (840)
                                   ..++||||+++++|.+++..     ...+++..++.++.||+.||.|||++||+||||||+|||++.
T Consensus        88 -------------~~~lv~e~~~~~~L~~~l~~-----~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIll~~  149 (326)
T 2y0a_A           88 -------------DVILILELVAGGELFDFLAE-----KESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLD  149 (326)
T ss_dssp             -------------EEEEEEECCCSCBHHHHHTT-----SSCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESC
T ss_pred             -------------EEEEEEEcCCCCCHHHHHHh-----cCCcCHHHHHHHHHHHHHHHHHHHHCCeEcCCCCHHHEEEec
Confidence                         35999999999999999864     356999999999999999999999999999999999999987


Q ss_pred             ccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHHHHHHHHH
Q 003185          663 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL  742 (840)
Q Consensus       663 ~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLGvIL~ELL  742 (840)
                      ++.   ....+||+|||+++.......           .....||+.|+|||++.+    ..++.++|||||||++|+|+
T Consensus       150 ~~~---~~~~~kl~Dfg~a~~~~~~~~-----------~~~~~gt~~y~aPE~~~~----~~~~~~~DiwslG~il~~ll  211 (326)
T 2y0a_A          150 RNV---PKPRIKIIDFGLAHKIDFGNE-----------FKNIFGTPEFVAPEIVNY----EPLGLEADMWSIGVITYILL  211 (326)
T ss_dssp             SSS---SSCCEEECCCTTCEECCTTSC-----------CCCCCSCTTTCCHHHHTT----CCCCTHHHHHHHHHHHHHHH
T ss_pred             CCC---CCCCEEEEECCCCeECCCCCc-----------cccccCCcCcCCceeecC----CCCCcHHHHHHHHHHHHHHH
Confidence            631   223699999999987643211           123469999999999975    67899999999999999999


Q ss_pred             hCCCCCCCCCHHHHHHHHHcCCCCCcchHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHH
Q 003185          743 TLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAG  822 (840)
Q Consensus       743 TG~~PF~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L~dLI~rCL~~DP~eRPSa~  822 (840)
                      +|..||.+....+....+...........                        ....+..+.+||.+||..||.+|||+.
T Consensus       212 ~g~~pf~~~~~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~li~~~L~~dP~~Rpt~~  267 (326)
T 2y0a_A          212 SGASPFLGDTKQETLANVSAVNYEFEDEY------------------------FSNTSALAKDFIRRLLVKDPKKRMTIQ  267 (326)
T ss_dssp             HSCCSSCCSSHHHHHHHHHHTCCCCCHHH------------------------HTTSCHHHHHHHHHHSCSSGGGSCCHH
T ss_pred             HCcCCCCCCCHHHHHHHHHhcCCCcCccc------------------------cccCCHHHHHHHHHHccCChhhCCCHH
Confidence            99999999888887777766533221111                        122356789999999999999999999


Q ss_pred             HHHHHHHh
Q 003185          823 DLYEMFVA  830 (840)
Q Consensus       823 ELLehLe~  830 (840)
                      ++++|..-
T Consensus       268 e~l~hp~~  275 (326)
T 2y0a_A          268 DSLQHPWI  275 (326)
T ss_dssp             HHHHSTTT
T ss_pred             HHhcCCCc
Confidence            99998543


No 41 
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00  E-value=1.4e-41  Score=373.86  Aligned_cols=263  Identities=26%  Similarity=0.308  Sum_probs=208.7

Q ss_pred             CCceeeeeecccCceEEEEEEE--CCeeEEEEEEecccCCCC-hHHHHHhHHhHHHHHHHHHhCCCCCcceeeeEEecCC
Q 003185          505 PSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSS-ADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK  581 (840)
Q Consensus       505 ~~y~i~~~LG~G~fG~Vy~a~~--~~~~vAVKI~~lk~~~~~-~~~~~~f~~~~~rEi~iL~~L~HpNIV~l~g~~~~~~  581 (840)
                      +.|++.+.||+|+||.||+|.+  .+..||+|++........ ...    .+.+.+|+.+++.++||||+++++++....
T Consensus        24 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~----~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~   99 (351)
T 3c0i_A           24 DVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLS----TEDLKREASICHMLKHPHIVELLETYSSDG   99 (351)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCC----HHHHHHHHHHHHHCCCTTBCCEEEEEEETT
T ss_pred             cceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccch----HHHHHHHHHHHHhCCCCCCCcEEEEEEeCC
Confidence            5799999999999999999997  578999999764321110 001    233489999999999999999999998665


Q ss_pred             CCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCCCcEEEe
Q 003185          582 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID  661 (840)
Q Consensus       582 ~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKPeNILLd  661 (840)
                      .              .||||||++|++|.+++..... ....+++..++.++.||+.||.|||++||+||||||+|||++
T Consensus       100 ~--------------~~lv~e~~~g~~L~~~l~~~~~-~~~~~~~~~~~~i~~qi~~al~~lH~~~ivHrDlkp~NIl~~  164 (351)
T 3c0i_A          100 M--------------LYMVFEFMDGADLCFEIVKRAD-AGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLA  164 (351)
T ss_dssp             E--------------EEEEEECCSSCBHHHHHHHHHH-TTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC
T ss_pred             E--------------EEEEEeCCCCCCHHHHHHHhcc-cCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChHHeEEe
Confidence            3              5999999999999998875322 234689999999999999999999999999999999999998


Q ss_pred             cccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHHHHHHHH
Q 003185          662 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL  741 (840)
Q Consensus       662 ~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLGvIL~EL  741 (840)
                      .++    ....+||+|||++.........          .....||+.|+|||++.+    ..++.++|||||||+||+|
T Consensus       165 ~~~----~~~~vkl~Dfg~a~~~~~~~~~----------~~~~~gt~~y~aPE~~~~----~~~~~~~DiwslG~il~~l  226 (351)
T 3c0i_A          165 SKE----NSAPVKLGGFGVAIQLGESGLV----------AGGRVGTPHFMAPEVVKR----EPYGKPVDVWGCGVILFIL  226 (351)
T ss_dssp             SSS----TTCCEEECCCTTCEECCTTSCB----------CCCCCSCGGGCCHHHHTT----CCBCTHHHHHHHHHHHHHH
T ss_pred             cCC----CCCcEEEecCcceeEecCCCee----------ecCCcCCcCccCHHHHcC----CCCCchHhhHHHHHHHHHH
Confidence            653    2356999999999876542211          123469999999999986    5689999999999999999


Q ss_pred             HhCCCCCCCCCHHHHHHHHHcCCCCCcchHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH
Q 003185          742 LTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA  821 (840)
Q Consensus       742 LTG~~PF~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L~dLI~rCL~~DP~eRPSa  821 (840)
                      ++|..||.+. ..++...+..+.....+..                        ....+..+.+||.+||..||.+|||+
T Consensus       227 l~g~~pf~~~-~~~~~~~i~~~~~~~~~~~------------------------~~~~s~~~~~li~~~L~~dP~~R~s~  281 (351)
T 3c0i_A          227 LSGCLPFYGT-KERLFEGIIKGKYKMNPRQ------------------------WSHISESAKDLVRRMLMLDPAERITV  281 (351)
T ss_dssp             HHSSCSSCSS-HHHHHHHHHHTCCCCCHHH------------------------HTTSCHHHHHHHHHHTCSSTTTSCCH
T ss_pred             HHCCCCCCCc-HHHHHHHHHcCCCCCCccc------------------------cccCCHHHHHHHHHHCCCChhHCcCH
Confidence            9999999875 4455555555433222211                        12235679999999999999999999


Q ss_pred             HHHHHHHH
Q 003185          822 GDLYEMFV  829 (840)
Q Consensus       822 ~ELLehLe  829 (840)
                      .++++|.+
T Consensus       282 ~e~l~hp~  289 (351)
T 3c0i_A          282 YEALNHPW  289 (351)
T ss_dssp             HHHHTSHH
T ss_pred             HHHhcChh
Confidence            99999854


No 42 
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00  E-value=5.7e-42  Score=370.17  Aligned_cols=284  Identities=19%  Similarity=0.229  Sum_probs=208.6

Q ss_pred             CCCCCceeeeeecccCceEEEEEEE-CCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeEEecC
Q 003185          502 GSFPSLSSCDEAGKSVSSSLFRCKF-GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISS  580 (840)
Q Consensus       502 ~~~~~y~i~~~LG~G~fG~Vy~a~~-~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~l~g~~~~~  580 (840)
                      ..+++|++.+.||+|+||+||+|.+ .+..+|+|++.....  .    ......+.+|+.++++++||||+++++++...
T Consensus        18 ~l~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~--~----~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~   91 (311)
T 3niz_A           18 GLMEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAE--D----EGIPSTAIREISLLKELHHPNIVSLIDVIHSE   91 (311)
T ss_dssp             CSSCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCS
T ss_pred             chHhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccc--c----chhhHHHHHHHHHHHHcCCCCEeeeeeEEccC
Confidence            5678999999999999999999998 678899998754321  1    11223458999999999999999999998765


Q ss_pred             CCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCCCcEEE
Q 003185          581 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILI  660 (840)
Q Consensus       581 ~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKPeNILL  660 (840)
                      ..              .+|||||++ ++|.+++..    ....+++..++.++.||+.||.|||++||+||||||+|||+
T Consensus        92 ~~--------------~~lv~e~~~-~~l~~~~~~----~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIl~  152 (311)
T 3niz_A           92 RC--------------LTLVFEFME-KDLKKVLDE----NKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLI  152 (311)
T ss_dssp             SC--------------EEEEEECCS-EEHHHHHHT----CTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE
T ss_pred             CE--------------EEEEEcCCC-CCHHHHHHh----ccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCchHhEEE
Confidence            53              499999998 489888864    23568999999999999999999999999999999999999


Q ss_pred             ecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHHHHHHH
Q 003185          661 DLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLE  740 (840)
Q Consensus       661 d~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLGvIL~E  740 (840)
                      +.+       +.+||+|||+++........          .....||+.|+|||++.+   ...++.++|||||||++|+
T Consensus       153 ~~~-------~~~kl~Dfg~a~~~~~~~~~----------~~~~~~t~~y~aPE~~~~---~~~~~~~~DiwslG~il~~  212 (311)
T 3niz_A          153 NSD-------GALKLADFGLARAFGIPVRS----------YTHEVVTLWYRAPDVLMG---SKKYSTSVDIWSIGCIFAE  212 (311)
T ss_dssp             CTT-------CCEEECCCTTCEETTSCCC-------------CCCCCCTTCCHHHHTT---CCSCCTHHHHHHHHHHHHH
T ss_pred             CCC-------CCEEEccCcCceecCCCccc----------ccCCcccCCcCCHHHhcC---CCCCCchHHhHHHHHHHHH
Confidence            877       45999999999866432111          123468999999999875   2467899999999999999


Q ss_pred             HHhCCCCCCCCCHHHHHHHHHcCCCCCcchHHhhhccCccc--cccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCC
Q 003185          741 LLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEH--EVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTER  818 (840)
Q Consensus       741 LLTG~~PF~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~--~~~~~~~~~~~~~~~~~~s~~L~dLI~rCL~~DP~eR  818 (840)
                      |++|+.||.+....+....+........+..+.........  ..................++++.+||.+||+.||.+|
T Consensus       213 ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R  292 (311)
T 3niz_A          213 MITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKR  292 (311)
T ss_dssp             HHHSSCSCCCSSTTTHHHHHHHHHCCCCTTTSGGGTTSHHHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTS
T ss_pred             HHhCCCCCCCCChHHHHHHHHHHHCCCChHHhhhhhccchhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHC
Confidence            99999999887666555555432111111111111000000  0000000000111122345688999999999999999


Q ss_pred             CCHHHHHHHHHh
Q 003185          819 PTAGDLYEMFVA  830 (840)
Q Consensus       819 PSa~ELLehLe~  830 (840)
                      ||++|+++|.+-
T Consensus       293 pt~~ell~hp~f  304 (311)
T 3niz_A          293 ISARDAMNHPYF  304 (311)
T ss_dssp             CCHHHHHTSGGG
T ss_pred             CCHHHHhcCccc
Confidence            999999998554


No 43 
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00  E-value=1.3e-41  Score=363.83  Aligned_cols=265  Identities=22%  Similarity=0.365  Sum_probs=214.6

Q ss_pred             CCCCCceeeeeecccCceEEEEEEE-------CCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceee
Q 003185          502 GSFPSLSSCDEAGKSVSSSLFRCKF-------GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMY  574 (840)
Q Consensus       502 ~~~~~y~i~~~LG~G~fG~Vy~a~~-------~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~l~  574 (840)
                      ....+|.+.+.||+|+||.||+|.+       .+..+|+|+....   ......+.    +.+|+.++++++||||++++
T Consensus        20 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~----~~~E~~~l~~l~hp~iv~~~   92 (314)
T 2ivs_A           20 FPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKEN---ASPSELRD----LLSEFNVLKQVNHPHVIKLY   92 (314)
T ss_dssp             CCGGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTT---CCHHHHHH----HHHHHHHHTTCCCTTBCCEE
T ss_pred             cchhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCC---CCHHHHHH----HHHHHHHHhhCCCCceeeEE
Confidence            3457899999999999999999986       2367889885422   22333333    48999999999999999999


Q ss_pred             eEEecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhcc-------------------CCCCCCHHHHHHHHHH
Q 003185          575 GHKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSET-------------------GEKHVSVKLALFIAQD  635 (840)
Q Consensus       575 g~~~~~~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~-------------------~~~~ls~~~~~~Ia~Q  635 (840)
                      +++......              ++||||+++++|.+++......                   ....+++..++.++.|
T Consensus        93 ~~~~~~~~~--------------~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~q  158 (314)
T 2ivs_A           93 GACSQDGPL--------------LLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQ  158 (314)
T ss_dssp             EEECSSSSC--------------EEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHH
T ss_pred             EEEecCCce--------------EEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHH
Confidence            998766543              9999999999999999863211                   1234899999999999


Q ss_pred             HHHHHHHHHhCCeecccCCCCcEEEecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhh
Q 003185          636 VAAALVELHSKHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEV  715 (840)
Q Consensus       636 Ia~AL~yLHs~gIVHRDLKPeNILLd~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEv  715 (840)
                      |+.||.|||++||+||||||+|||++.+       +.+||+|||++..........        ......+|+.|+|||+
T Consensus       159 i~~~l~~lH~~~ivH~dikp~NIli~~~-------~~~kl~Dfg~~~~~~~~~~~~--------~~~~~~~~~~y~aPE~  223 (314)
T 2ivs_A          159 ISQGMQYLAEMKLVHRDLAARNILVAEG-------RKMKISDFGLSRDVYEEDSYV--------KRSQGRIPVKWMAIES  223 (314)
T ss_dssp             HHHHHHHHHHTTEECCCCSGGGEEEETT-------TEEEECCCTTCEECTTTSCEE--------CSSCCCSCGGGCCHHH
T ss_pred             HHHHHHHHHHCCCcccccchheEEEcCC-------CCEEEccccccccccccccce--------eccCCCCcccccChhh
Confidence            9999999999999999999999999977       469999999998664422110        1122357889999999


Q ss_pred             hhcccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHcCCCCCcchHHhhhccCccccccccCCCCCCch
Q 003185          716 LRAMHKPNLYGLEVDIWSYGCLLLELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPE  794 (840)
Q Consensus       716 L~~~~~~~~~s~kSDVWSLGvIL~ELLT-G~~PF~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~  794 (840)
                      +.+    ..++.++|||||||++|||++ |..||.+.....+...+.....+..+.                        
T Consensus       224 ~~~----~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~------------------------  275 (314)
T 2ivs_A          224 LFD----HIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKTGHRMERPD------------------------  275 (314)
T ss_dssp             HHH----CEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCCCCCCT------------------------
T ss_pred             hcC----CCcCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHhhcCCcCCCCc------------------------
Confidence            986    568999999999999999999 999999888888777776664433321                        


Q ss_pred             hhhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhcC
Q 003185          795 AELETLSFLVDVFRRCTEENPTERPTAGDLYEMFVARTS  833 (840)
Q Consensus       795 ~~~~~s~~L~dLI~rCL~~DP~eRPSa~ELLehLe~l~~  833 (840)
                         ..++.+.+||.+||..||.+|||+.+|+++|+.+..
T Consensus       276 ---~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~~  311 (314)
T 2ivs_A          276 ---NCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMV  311 (314)
T ss_dssp             ---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             ---cCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence               124579999999999999999999999999998764


No 44 
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00  E-value=5.9e-42  Score=378.72  Aligned_cols=256  Identities=24%  Similarity=0.306  Sum_probs=206.4

Q ss_pred             CCCCCCceeeeeecccCceEEEEEEE--CCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhC-CCCCcceeeeEE
Q 003185          501 PGSFPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEMYGHK  577 (840)
Q Consensus       501 p~~~~~y~i~~~LG~G~fG~Vy~a~~--~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L-~HpNIV~l~g~~  577 (840)
                      ...+++|++.+.||+|+||.||+|++  .+..+|+|++.....     ........+.+|+.+|..+ +||||+++++++
T Consensus        19 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~-----~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~   93 (353)
T 3txo_A           19 RLGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVI-----LQDDDVECTMTEKRILSLARNHPFLTQLFCCF   93 (353)
T ss_dssp             ----CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHH-----HHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEE
T ss_pred             CCchhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHh-----cchhHHHHHHHHHHHHHhccCCCceeeEEEEE
Confidence            36789999999999999999999997  467899999753211     1111223458899999998 699999999999


Q ss_pred             ecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCCCc
Q 003185          578 ISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSEN  657 (840)
Q Consensus       578 ~~~~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKPeN  657 (840)
                      .....              .||||||++||+|..++..     ...+++..++.++.||+.||.|||++||+||||||+|
T Consensus        94 ~~~~~--------------~~lv~E~~~gg~L~~~l~~-----~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~N  154 (353)
T 3txo_A           94 QTPDR--------------LFFVMEFVNGGDLMFHIQK-----SRRFDEARARFYAAEIISALMFLHDKGIIYRDLKLDN  154 (353)
T ss_dssp             ECSSE--------------EEEEEECCCSCBHHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGG
T ss_pred             EeCCE--------------EEEEEeCCCCCcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCHHH
Confidence            86653              5999999999999999986     2569999999999999999999999999999999999


Q ss_pred             EEEecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHHHH
Q 003185          658 ILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCL  737 (840)
Q Consensus       658 ILLd~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLGvI  737 (840)
                      |||+.+       +.+||+|||+++.......          .....+||+.|+|||++.+    ..++.++|||||||+
T Consensus       155 ILl~~~-------g~ikL~DFG~a~~~~~~~~----------~~~~~~gt~~y~aPE~~~~----~~~~~~~DiwslG~i  213 (353)
T 3txo_A          155 VLLDHE-------GHCKLADFGMCKEGICNGV----------TTATFCGTPDYIAPEILQE----MLYGPAVDWWAMGVL  213 (353)
T ss_dssp             EEECTT-------SCEEECCCTTCBCSCC-------------------CCGGGCCHHHHHH----HHCTTHHHHHHHHHH
T ss_pred             EEECCC-------CCEEEccccceeecccCCc----------cccccCCCcCeEChhhcCC----CCcCCccCCCcchHH
Confidence            999877       4699999999975332111          1234579999999999987    567899999999999


Q ss_pred             HHHHHhCCCCCCCCCHHHHHHHHHcCCCCCcchHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCC
Q 003185          738 LLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTE  817 (840)
Q Consensus       738 L~ELLTG~~PF~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L~dLI~rCL~~DP~e  817 (840)
                      +|||++|..||.+.+..++...|...... ++.                           ..+..+.+||.+||..||.+
T Consensus       214 l~ell~G~~Pf~~~~~~~~~~~i~~~~~~-~p~---------------------------~~~~~~~~li~~lL~~dP~~  265 (353)
T 3txo_A          214 LYEMLCGHAPFEAENEDDLFEAILNDEVV-YPT---------------------------WLHEDATGILKSFMTKNPTM  265 (353)
T ss_dssp             HHHHHHSSCSSCCSSHHHHHHHHHHCCCC-CCT---------------------------TSCHHHHHHHHHHTCSSGGG
T ss_pred             HHHHHhCCCCCCCCCHHHHHHHHHcCCCC-CCC---------------------------CCCHHHHHHHHHHhhhCHHH
Confidence            99999999999999999888888765321 111                           12457899999999999999


Q ss_pred             CCCH------HHHHHHHH
Q 003185          818 RPTA------GDLYEMFV  829 (840)
Q Consensus       818 RPSa------~ELLehLe  829 (840)
                      ||++      ++|++|..
T Consensus       266 R~~~~~~~~~~~il~hp~  283 (353)
T 3txo_A          266 RLGSLTQGGEHAILRHPF  283 (353)
T ss_dssp             STTSGGGTCTHHHHTSGG
T ss_pred             ccCCcccCCHHHHhhCCc
Confidence            9998      89998854


No 45 
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00  E-value=1.2e-41  Score=370.56  Aligned_cols=258  Identities=24%  Similarity=0.274  Sum_probs=203.3

Q ss_pred             CCCCCCceeeeeecccCceEEEEEEE-----CCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeee
Q 003185          501 PGSFPSLSSCDEAGKSVSSSLFRCKF-----GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYG  575 (840)
Q Consensus       501 p~~~~~y~i~~~LG~G~fG~Vy~a~~-----~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~l~g  575 (840)
                      ....++|++.+.||+|+||.||+|+.     .+..+|+|++.............    .+.+|+.+|+.++||||+++++
T Consensus        13 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~----~~~~E~~~l~~l~hp~iv~~~~   88 (327)
T 3a62_A           13 KIRPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTA----HTKAERNILEEVKHPFIVDLIY   88 (327)
T ss_dssp             CCCGGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC------------------HHHHHHHCCCTTBCCEEE
T ss_pred             CCCHHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHH----HHHHHHHHHHhCCCCCccceeE
Confidence            35678999999999999999999987     57889999975432211112222    3488999999999999999999


Q ss_pred             EEecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCC
Q 003185          576 HKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKS  655 (840)
Q Consensus       576 ~~~~~~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKP  655 (840)
                      ++.....              .||||||+++++|.+++..     ...+++..++.++.||+.||.|||++||+||||||
T Consensus        89 ~~~~~~~--------------~~lv~e~~~~~~L~~~l~~-----~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp  149 (327)
T 3a62_A           89 AFQTGGK--------------LYLILEYLSGGELFMQLER-----EGIFMEDTACFYLAEISMALGHLHQKGIIYRDLKP  149 (327)
T ss_dssp             EEECSSC--------------EEEEEECCTTEEHHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCT
T ss_pred             EEEcCCE--------------EEEEEeCCCCCcHHHHHHh-----CCCCCHHHHHHHHHHHHHHHHHHHhCCEEcccCCH
Confidence            9986654              4999999999999999976     24689999999999999999999999999999999


Q ss_pred             CcEEEecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHH
Q 003185          656 ENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYG  735 (840)
Q Consensus       656 eNILLd~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLG  735 (840)
                      +|||++.+       +.+||+|||+++.......          ......||+.|+|||++.+    ..++.++||||||
T Consensus       150 ~Nill~~~-------~~~kl~Dfg~~~~~~~~~~----------~~~~~~gt~~y~aPE~~~~----~~~~~~~DiwslG  208 (327)
T 3a62_A          150 ENIMLNHQ-------GHVKLTDFGLCKESIHDGT----------VTHTFCGTIEYMAPEILMR----SGHNRAVDWWSLG  208 (327)
T ss_dssp             TTEEECTT-------SCEEECCCSCC--------------------CTTSSCCTTSCHHHHTT----SCCCTHHHHHHHH
T ss_pred             HHeEECCC-------CcEEEEeCCcccccccCCc----------cccccCCCcCccCHhhCcC----CCCCCcccchhHH
Confidence            99999877       4699999999975432211          1133469999999999976    5679999999999


Q ss_pred             HHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCcchHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCC
Q 003185          736 CLLLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENP  815 (840)
Q Consensus       736 vIL~ELLTG~~PF~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L~dLI~rCL~~DP  815 (840)
                      |++|+|++|..||.+.+..+....+..... .++.                           ..+..+.+||.+||..||
T Consensus       209 ~il~el~~g~~pf~~~~~~~~~~~i~~~~~-~~p~---------------------------~~~~~~~~li~~~L~~dp  260 (327)
T 3a62_A          209 ALMYDMLTGAPPFTGENRKKTIDKILKCKL-NLPP---------------------------YLTQEARDLLKKLLKRNA  260 (327)
T ss_dssp             HHHHHHHHSSCSCCCSSHHHHHHHHHHTCC-CCCT---------------------------TSCHHHHHHHHHHSCSCG
T ss_pred             HHHHHHHHCCCCCCCCCHHHHHHHHHhCCC-CCCC---------------------------CCCHHHHHHHHHHHhcCH
Confidence            999999999999999888887777766532 1111                           124578999999999999


Q ss_pred             CCCC-----CHHHHHHHHHh
Q 003185          816 TERP-----TAGDLYEMFVA  830 (840)
Q Consensus       816 ~eRP-----Sa~ELLehLe~  830 (840)
                      .+||     ++.++++|..-
T Consensus       261 ~~R~~~~~~~~~e~l~hp~f  280 (327)
T 3a62_A          261 ASRLGAGPGDAGEVQAHPFF  280 (327)
T ss_dssp             GGSTTSSTTTHHHHHHSGGG
T ss_pred             hhccCCCCCCHHHHHcCCcc
Confidence            9999     89999998553


No 46 
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00  E-value=1.2e-41  Score=373.87  Aligned_cols=255  Identities=23%  Similarity=0.323  Sum_probs=210.3

Q ss_pred             CCCCCceeeeeecccCceEEEEEEE--CCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeEEec
Q 003185          502 GSFPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKIS  579 (840)
Q Consensus       502 ~~~~~y~i~~~LG~G~fG~Vy~a~~--~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~l~g~~~~  579 (840)
                      ..+++|++.+.||+|+||.||+|+.  .+..+|+|+......     ........+.+|+.+|+.++||||+++++++..
T Consensus         2 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~-----~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~   76 (337)
T 1o6l_A            2 VTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVI-----IAKDEVAHTVTESRVLQNTRHPFLTALKYAFQT   76 (337)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHH-----HHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEEC
T ss_pred             CChHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHh-----hhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEe
Confidence            3567999999999999999999997  578899999753211     011112345899999999999999999999986


Q ss_pred             CCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCCCcEE
Q 003185          580 SKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENIL  659 (840)
Q Consensus       580 ~~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKPeNIL  659 (840)
                      ...              .||||||++||+|..++..     ...+++..++.++.||+.||.|||++||+||||||+|||
T Consensus        77 ~~~--------------~~lv~E~~~gg~L~~~l~~-----~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIl  137 (337)
T 1o6l_A           77 HDR--------------LCFVMEYANGGELFFHLSR-----ERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLM  137 (337)
T ss_dssp             SSE--------------EEEEEECCTTCBHHHHHHH-----HSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEE
T ss_pred             CCE--------------EEEEEeCCCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCCHHHEE
Confidence            653              5999999999999999976     256899999999999999999999999999999999999


Q ss_pred             EecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHHHHHH
Q 003185          660 IDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLL  739 (840)
Q Consensus       660 Ld~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLGvIL~  739 (840)
                      ++.+       +.+||+|||+++.......          ......||+.|+|||++.+    ..++.++|||||||++|
T Consensus       138 l~~~-------g~vkL~DFG~a~~~~~~~~----------~~~~~~gt~~y~aPE~~~~----~~~~~~~DiwslG~il~  196 (337)
T 1o6l_A          138 LDKD-------GHIKITDFGLCKEGISDGA----------TMKTFCGTPEYLAPEVLED----NDYGRAVDWWGLGVVMY  196 (337)
T ss_dssp             ECTT-------SCEEECCCTTCBCSCCTTC----------CBCCCEECGGGCCGGGGSS----SCBCTTHHHHHHHHHHH
T ss_pred             ECCC-------CCEEEeeccchhhcccCCC----------cccccccChhhCChhhhcC----CCCCchhhcccchhHHH
Confidence            9877       4699999999975432111          1234579999999999976    66899999999999999


Q ss_pred             HHHhCCCCCCCCCHHHHHHHHHcCCCCCcchHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC
Q 003185          740 ELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP  819 (840)
Q Consensus       740 ELLTG~~PF~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L~dLI~rCL~~DP~eRP  819 (840)
                      ||++|..||.+.+...+...+..... .++.                           ..+..+.+||.+||..||.+||
T Consensus       197 ell~g~~Pf~~~~~~~~~~~i~~~~~-~~p~---------------------------~~s~~~~~li~~lL~~dP~~R~  248 (337)
T 1o6l_A          197 EMMCGRLPFYNQDHERLFELILMEEI-RFPR---------------------------TLSPEAKSLLAGLLKKDPKQRL  248 (337)
T ss_dssp             HHHHSSCSSCCSSHHHHHHHHHHCCC-CCCT---------------------------TSCHHHHHHHHHHTCSSTTTST
T ss_pred             HHhcCCCCCCCCCHHHHHHHHHcCCC-CCCC---------------------------CCCHHHHHHHHHHhhcCHHHhc
Confidence            99999999999888888877765422 1121                           1245789999999999999999


Q ss_pred             -----CHHHHHHHHH
Q 003185          820 -----TAGDLYEMFV  829 (840)
Q Consensus       820 -----Sa~ELLehLe  829 (840)
                           ++++|++|..
T Consensus       249 g~~~~~~~ei~~h~~  263 (337)
T 1o6l_A          249 GGGPSDAKEVMEHRF  263 (337)
T ss_dssp             TCSTTTHHHHHTSGG
T ss_pred             CCCCCCHHHHHcCCC
Confidence                 9999999854


No 47 
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00  E-value=5.1e-42  Score=380.95  Aligned_cols=261  Identities=24%  Similarity=0.367  Sum_probs=213.9

Q ss_pred             CCCCCceeeeeecccCceEEEEEEE--CCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeEEec
Q 003185          502 GSFPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKIS  579 (840)
Q Consensus       502 ~~~~~y~i~~~LG~G~fG~Vy~a~~--~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~l~g~~~~  579 (840)
                      +..++|.+.+.||+|+||.||+|.+  .+..||+|+....   ......+.    +.+|+.+|++++|||||++++++..
T Consensus       111 ~~~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~----~~~E~~~l~~l~hpniv~~~~~~~~  183 (377)
T 3cbl_A          111 LNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRET---LPPDLKAK----FLQEARILKQYSHPNIVRLIGVCTQ  183 (377)
T ss_dssp             CCGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTT---SCHHHHTT----TTHHHHHHTTCCCTTBCCEEEEECS
T ss_pred             EchHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEcccc---CCHHHHHH----HHHHHHHHHhCCCCCEEEEEEEEec
Confidence            4457899999999999999999998  4788999985422   22233333    4899999999999999999999976


Q ss_pred             CCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCCCcEE
Q 003185          580 SKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENIL  659 (840)
Q Consensus       580 ~~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKPeNIL  659 (840)
                      ....              ||||||+++|+|.+++...    ...+++..++.++.||+.||+|||++||+||||||+|||
T Consensus       184 ~~~~--------------~lv~e~~~~g~L~~~l~~~----~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nil  245 (377)
T 3cbl_A          184 KQPI--------------YIVMELVQGGDFLTFLRTE----GARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCL  245 (377)
T ss_dssp             SSSC--------------EEEEECCTTCBHHHHHHHH----GGGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEE
T ss_pred             CCCc--------------EEEEEcCCCCCHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHHCCcCCcccCHHHEE
Confidence            6543              9999999999999999762    245899999999999999999999999999999999999


Q ss_pred             EecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHHHHHH
Q 003185          660 IDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLL  739 (840)
Q Consensus       660 Ld~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLGvIL~  739 (840)
                      ++.+       +.+||+|||+++.........        ......+++.|+|||++.+    ..++.++|||||||+||
T Consensus       246 ~~~~-------~~~kl~DfG~s~~~~~~~~~~--------~~~~~~~~~~y~aPE~~~~----~~~~~~~DvwslG~il~  306 (377)
T 3cbl_A          246 VTEK-------NVLKISDFGMSREEADGVYAA--------SGGLRQVPVKWTAPEALNY----GRYSSESDVWSFGILLW  306 (377)
T ss_dssp             ECTT-------CCEEECCGGGCEECTTSEEEC--------CSSCCEEEGGGSCHHHHHH----CEEEHHHHHHHHHHHHH
T ss_pred             EcCC-------CcEEECcCCCceecCCCceee--------cCCCCCCCcCcCCHhHhcc----CCCCchhhHHHHHHHHH
Confidence            9877       469999999998654321110        0111235678999999986    56899999999999999


Q ss_pred             HHHh-CCCCCCCCCHHHHHHHHHcCCCCCcchHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCC
Q 003185          740 ELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTER  818 (840)
Q Consensus       740 ELLT-G~~PF~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L~dLI~rCL~~DP~eR  818 (840)
                      ||++ |..||.+....++...+..+.+...+.                           .+++.+.+||.+||+.||.+|
T Consensus       307 el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~l~~li~~cl~~dP~~R  359 (377)
T 3cbl_A          307 ETFSLGASPYPNLSNQQTREFVEKGGRLPCPE---------------------------LCPDAVFRLMEQCWAYEPGQR  359 (377)
T ss_dssp             HHHTTSCCSSTTSCHHHHHHHHHTTCCCCCCT---------------------------TCCHHHHHHHHHHTCSSGGGS
T ss_pred             HHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCC---------------------------CCCHHHHHHHHHHcCCCchhC
Confidence            9998 999999998888888877765543332                           124578999999999999999


Q ss_pred             CCHHHHHHHHHhhcC
Q 003185          819 PTAGDLYEMFVARTS  833 (840)
Q Consensus       819 PSa~ELLehLe~l~~  833 (840)
                      ||+.+|++.|+.+..
T Consensus       360 ps~~~i~~~L~~i~~  374 (377)
T 3cbl_A          360 PSFSTIYQELQSIRK  374 (377)
T ss_dssp             CCHHHHHHHHHHHHH
T ss_pred             cCHHHHHHHHHHHHh
Confidence            999999999998753


No 48 
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00  E-value=2.8e-41  Score=356.70  Aligned_cols=262  Identities=25%  Similarity=0.307  Sum_probs=214.1

Q ss_pred             CCCCceeeeeecccCceEEEEEEE--CCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeEEecC
Q 003185          503 SFPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISS  580 (840)
Q Consensus       503 ~~~~y~i~~~LG~G~fG~Vy~a~~--~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~l~g~~~~~  580 (840)
                      ..++|++.+.||+|+||.||+|.+  .+..+|+|++.....  .....+.    +.+|+.++++++||||+++++++...
T Consensus         4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~----~~~e~~~l~~l~h~~i~~~~~~~~~~   77 (284)
T 3kk8_A            4 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKL--SARDFQK----LEREARICRKLQHPNIVRLHDSIQEE   77 (284)
T ss_dssp             TTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGC--CHHHHHH----HHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred             hhhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccC--CHHHHHH----HHHHHHHHHHcCCCCcCeEEEEEEcC
Confidence            457899999999999999999997  477899999764432  3333333    48999999999999999999999865


Q ss_pred             CCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCCCcEEE
Q 003185          581 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILI  660 (840)
Q Consensus       581 ~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKPeNILL  660 (840)
                      ..              .++||||+++++|.+++..     ...+++..++.++.||+.||.|||++||+||||||+|||+
T Consensus        78 ~~--------------~~~v~e~~~~~~l~~~~~~-----~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~  138 (284)
T 3kk8_A           78 SF--------------HYLVFDLVTGGELFEDIVA-----REFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLL  138 (284)
T ss_dssp             SE--------------EEEEECCCCSCBHHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEE
T ss_pred             CE--------------EEEEEecCCCCCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCCcCcCCCCHHHEEE
Confidence            53              4999999999999999876     2568999999999999999999999999999999999999


Q ss_pred             ecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHHHHHHH
Q 003185          661 DLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLE  740 (840)
Q Consensus       661 d~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLGvIL~E  740 (840)
                      +.++.    ...+||+|||++........           .....||+.|+|||++.+    ..++.++||||||+++|+
T Consensus       139 ~~~~~----~~~~kl~Dfg~~~~~~~~~~-----------~~~~~~~~~y~aPE~~~~----~~~~~~~Di~slG~~l~~  199 (284)
T 3kk8_A          139 ASKAK----GAAVKLADFGLAIEVNDSEA-----------WHGFAGTPGYLSPEVLKK----DPYSKPVDIWACGVILYI  199 (284)
T ss_dssp             SSSST----TCCEEECCCTTCEECCSSCB-----------CCCSCSCGGGCCHHHHTT----CCBCTHHHHHHHHHHHHH
T ss_pred             ecCCC----CCcEEEeeceeeEEcccCcc-----------ccCCCCCcCCcCchhhcC----CCCCcccchHHHHHHHHH
Confidence            86632    35699999999976543221           123469999999999986    668999999999999999


Q ss_pred             HHhCCCCCCCCCHHHHHHHHHcCCCCCcchHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCC
Q 003185          741 LLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPT  820 (840)
Q Consensus       741 LLTG~~PF~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L~dLI~rCL~~DP~eRPS  820 (840)
                      |++|..||.+.........+...........                        ....++.+.+||.+||+.||.+|||
T Consensus       200 l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~li~~~l~~dp~~Rps  255 (284)
T 3kk8_A          200 LLVGYPPFWDEDQHRLYAQIKAGAYDYPSPE------------------------WDTVTPEAKSLIDSMLTVNPKKRIT  255 (284)
T ss_dssp             HHHSSCSSCCSSHHHHHHHHHHTCCCCCTTT------------------------TTTSCHHHHHHHHHHSCSSTTTSCC
T ss_pred             HHHCCCCCCCCchhHHHHHHHhccccCCchh------------------------hcccCHHHHHHHHHHcccChhhCCC
Confidence            9999999999888888877766533211110                        1123557899999999999999999


Q ss_pred             HHHHHHHHHhhc
Q 003185          821 AGDLYEMFVART  832 (840)
Q Consensus       821 a~ELLehLe~l~  832 (840)
                      +.++++|..-..
T Consensus       256 ~~~~l~h~~~~~  267 (284)
T 3kk8_A          256 ADQALKVPWICN  267 (284)
T ss_dssp             HHHHTTSHHHHS
T ss_pred             HHHHhcCccccC
Confidence            999999866443


No 49 
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00  E-value=1.4e-41  Score=359.23  Aligned_cols=258  Identities=24%  Similarity=0.329  Sum_probs=210.8

Q ss_pred             CCCCCceeeeeecccCceEEEEEEEC-CeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeEEecC
Q 003185          502 GSFPSLSSCDEAGKSVSSSLFRCKFG-SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISS  580 (840)
Q Consensus       502 ~~~~~y~i~~~LG~G~fG~Vy~a~~~-~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~l~g~~~~~  580 (840)
                      +..++|++.+.||+|+||.||+|.+. +..+|+|++....  ..   .+    .+.+|+.++++++||||+++++++...
T Consensus        21 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~--~~---~~----~~~~E~~~l~~l~h~~i~~~~~~~~~~   91 (283)
T 3gen_A           21 IDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS--MS---ED----EFIEEAKVMMNLSHEKLVQLYGVCTKQ   91 (283)
T ss_dssp             CCGGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTS--BC---HH----HHHHHHHHHHTCCCTTBCCEEEEECSS
T ss_pred             CCHHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCC--CC---HH----HHHHHHHHHhcCCCCCEeeEEEEEecC
Confidence            55679999999999999999999984 4579999875332  11   12    348999999999999999999999765


Q ss_pred             CCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCCCcEEE
Q 003185          581 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILI  660 (840)
Q Consensus       581 ~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKPeNILL  660 (840)
                      ..              .++||||+++++|.+++...    ...+++..++.++.||+.||.|||++||+||||||+|||+
T Consensus        92 ~~--------------~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nili  153 (283)
T 3gen_A           92 RP--------------IFIITEYMANGCLLNYLREM----RHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLV  153 (283)
T ss_dssp             SS--------------EEEEECCCTTCBHHHHHHCG----GGCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEE
T ss_pred             CC--------------eEEEEeccCCCcHHHHHHHh----ccCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCccceEEE
Confidence            53              49999999999999999741    2468999999999999999999999999999999999999


Q ss_pred             ecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHHHHHHH
Q 003185          661 DLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLE  740 (840)
Q Consensus       661 d~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLGvIL~E  740 (840)
                      +.+       +.+||+|||++..........         .....+|+.|+|||++.+    ..++.++||||||+++|+
T Consensus       154 ~~~-------~~~kl~Dfg~~~~~~~~~~~~---------~~~~~~~~~y~aPE~~~~----~~~~~~~Dv~slG~~l~~  213 (283)
T 3gen_A          154 NDQ-------GVVKVSDFGLSRYVLDDEYTS---------SVGSKFPVRWSPPEVLMY----SKFSSKSDIWAFGVLMWE  213 (283)
T ss_dssp             CTT-------SCEEECSTTGGGGBCCHHHHS---------TTSTTSCGGGCCHHHHHH----CCCSHHHHHHHHHHHHHH
T ss_pred             cCC-------CCEEEcccccccccccccccc---------ccCCccCcccCCHHHhcc----CCCCchhhHHHHHHHHHH
Confidence            877       469999999998664432111         122347889999999986    568999999999999999


Q ss_pred             HHh-CCCCCCCCCHHHHHHHHHcCCCCCcchHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC
Q 003185          741 LLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP  819 (840)
Q Consensus       741 LLT-G~~PF~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L~dLI~rCL~~DP~eRP  819 (840)
                      |++ |+.||......+....+........+..                           .++.+.+||.+||+.||.+||
T Consensus       214 l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~l~~li~~~l~~~p~~Rp  266 (283)
T 3gen_A          214 IYSLGKMPYERFTNSETAEHIAQGLRLYRPHL---------------------------ASEKVYTIMYSCWHEKADERP  266 (283)
T ss_dssp             HHTTTCCTTTTSCHHHHHHHHHTTCCCCCCTT---------------------------CCHHHHHHHHHTTCSSGGGSC
T ss_pred             HHhCCCCCccccChhHHHHHHhcccCCCCCCc---------------------------CCHHHHHHHHHHccCChhHCc
Confidence            998 9999999988888888877644333211                           135789999999999999999


Q ss_pred             CHHHHHHHHHhhcC
Q 003185          820 TAGDLYEMFVARTS  833 (840)
Q Consensus       820 Sa~ELLehLe~l~~  833 (840)
                      |+.+++++|+.+..
T Consensus       267 s~~~ll~~L~~~~~  280 (283)
T 3gen_A          267 TFKILLSNILDVMD  280 (283)
T ss_dssp             CHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHhh
Confidence            99999999998764


No 50 
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00  E-value=8.4e-42  Score=363.29  Aligned_cols=280  Identities=19%  Similarity=0.244  Sum_probs=205.8

Q ss_pred             CCCceeeeeecccCceEEEEEEEC-CeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeEEecCCC
Q 003185          504 FPSLSSCDEAGKSVSSSLFRCKFG-SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW  582 (840)
Q Consensus       504 ~~~y~i~~~LG~G~fG~Vy~a~~~-~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~l~g~~~~~~~  582 (840)
                      +++|++.+.||+|+||.||+|.+. +..+|+|++......      ......+.+|+.++++++||||+++++++.....
T Consensus         1 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~------~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~   74 (288)
T 1ob3_A            1 MEKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKED------EGIPSTTIREISILKELKHSNIVKLYDVIHTKKR   74 (288)
T ss_dssp             CCSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGG------GCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSC
T ss_pred             CccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccc------cccchhHHHHHHHHHhcCCCCEeeeeeEEccCCe
Confidence            468999999999999999999984 778999987543211      1112344899999999999999999999986553


Q ss_pred             CCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCCCcEEEec
Q 003185          583 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL  662 (840)
Q Consensus       583 ~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKPeNILLd~  662 (840)
                                    .++||||+++ +|.+++..    ....+++..++.++.||+.||.|||++||+||||||+|||++.
T Consensus        75 --------------~~lv~e~~~~-~l~~~~~~----~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~  135 (288)
T 1ob3_A           75 --------------LVLVFEHLDQ-DLKKLLDV----CEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINR  135 (288)
T ss_dssp             --------------EEEEEECCSE-EHHHHHHT----STTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECT
T ss_pred             --------------EEEEEEecCC-CHHHHHHh----cccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcC
Confidence                          4999999985 99999874    2356899999999999999999999999999999999999987


Q ss_pred             ccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHHHHHHHHH
Q 003185          663 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL  742 (840)
Q Consensus       663 ~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLGvIL~ELL  742 (840)
                      +       +.+||+|||++.........          .....||+.|+|||++.+   ...++.++|||||||++|+|+
T Consensus       136 ~-------~~~kl~Dfg~~~~~~~~~~~----------~~~~~~t~~y~aPE~~~~---~~~~~~~~DiwslG~il~~l~  195 (288)
T 1ob3_A          136 E-------GELKIADFGLARAFGIPVRK----------YTHEIVTLWYRAPDVLMG---SKKYSTTIDIWSVGCIFAEMV  195 (288)
T ss_dssp             T-------SCEEECCTTHHHHHCC-------------------CCCTTCCHHHHTT---CCSCCTHHHHHHHHHHHHHHH
T ss_pred             C-------CCEEEeECccccccCccccc----------cccccccccccCchheeC---CCCCCcHHHHHHHHHHHHHHH
Confidence            7       45999999999765432111          123468999999999975   245789999999999999999


Q ss_pred             hCCCCCCCCCHHHHHHHHHcCCCCCcchHHhhhccCc--cccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCC
Q 003185          743 TLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCH--EHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPT  820 (840)
Q Consensus       743 TG~~PF~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~s~~L~dLI~rCL~~DP~eRPS  820 (840)
                      +|..||.+.+..+....+...........+.......  ...+. ..............++.+.+||.+||+.||.+|||
T Consensus       196 ~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt  274 (288)
T 1ob3_A          196 NGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFT-VYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRIT  274 (288)
T ss_dssp             HSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCC-CCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCC
T ss_pred             hCCCCCCCCCHHHHHHHHHHHHCCCChhhchhhhcccccccccc-cccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCC
Confidence            9999999888777666554421111111111000000  00000 00000001111234678899999999999999999


Q ss_pred             HHHHHHHHH
Q 003185          821 AGDLYEMFV  829 (840)
Q Consensus       821 a~ELLehLe  829 (840)
                      ++|+++|..
T Consensus       275 ~~e~l~hp~  283 (288)
T 1ob3_A          275 AKQALEHAY  283 (288)
T ss_dssp             HHHHHTSGG
T ss_pred             HHHHhcCcc
Confidence            999999865


No 51 
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00  E-value=1e-41  Score=372.53  Aligned_cols=266  Identities=23%  Similarity=0.356  Sum_probs=209.2

Q ss_pred             CCCCCceeeeeecccCceEEEEEEE-------CCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhC-CCCCccee
Q 003185          502 GSFPSLSSCDEAGKSVSSSLFRCKF-------GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEM  573 (840)
Q Consensus       502 ~~~~~y~i~~~LG~G~fG~Vy~a~~-------~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L-~HpNIV~l  573 (840)
                      ...++|++.+.||+|+||.||+|.+       .+..||+|+....   ......+    .+.+|+.++.++ +|||||++
T Consensus        19 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~----~~~~E~~~l~~l~~hpniv~~   91 (359)
T 3vhe_A           19 FPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEG---ATHSEHR----ALMSELKILIHIGHHLNVVNL   91 (359)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTT---CCHHHHH----HHHHHHHHHHHHCCCTTBCCE
T ss_pred             ccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCc---CCHHHHH----HHHHHHHHHHhhcCCcceeee
Confidence            4567899999999999999999985       2368999986422   2223333    349999999999 69999999


Q ss_pred             eeEEecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhcc----------------------------------
Q 003185          574 YGHKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSET----------------------------------  619 (840)
Q Consensus       574 ~g~~~~~~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~----------------------------------  619 (840)
                      ++++.....             ..++||||+++|+|.+++......                                  
T Consensus        92 ~~~~~~~~~-------------~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (359)
T 3vhe_A           92 LGACTKPGG-------------PLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITS  158 (359)
T ss_dssp             EEEECSTTS-------------CCEEEEECCTTEEHHHHHHTTTTSBCSCC-----------------------------
T ss_pred             eeeeecCCC-------------ceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCc
Confidence            999876442             249999999999999999752110                                  


Q ss_pred             ---------------------------CCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCCCcEEEecccccCCCCCe
Q 003185          620 ---------------------------GEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLERKKADGKPV  672 (840)
Q Consensus       620 ---------------------------~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKPeNILLd~~~~~~~~~~~  672 (840)
                                                 ....+++..++.++.||+.||.|||++||+||||||+||||+.+       +.
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~~ivH~Dikp~NIll~~~-------~~  231 (359)
T 3vhe_A          159 SQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEK-------NV  231 (359)
T ss_dssp             -------------------------CTTTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGG-------GC
T ss_pred             cccccccccccccccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCC-------Cc
Confidence                                       01228999999999999999999999999999999999999877       45


Q ss_pred             EEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCC
Q 003185          673 VKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLT-LQVPYMGL  751 (840)
Q Consensus       673 vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLGvIL~ELLT-G~~PF~~~  751 (840)
                      +||+|||+++........        .......||+.|+|||++.+    ..++.++|||||||++|||+| |..||.+.
T Consensus       232 ~kl~Dfg~a~~~~~~~~~--------~~~~~~~~t~~y~aPE~~~~----~~~~~~~Di~slG~il~ellt~g~~p~~~~  299 (359)
T 3vhe_A          232 VKICDFGLARDIYKDPDY--------VRKGDARLPLKWMAPETIFD----RVYTIQSDVWSFGVLLWEIFSLGASPYPGV  299 (359)
T ss_dssp             EEECCCGGGSCTTSCTTC--------EEC--CEECGGGCCHHHHHH----CCCCHHHHHHHHHHHHHHHTTTSCCSSTTC
T ss_pred             EEEEeccceeeecccccc--------hhccccCCCceeEChhhhcC----CCCCchhhhhhHHHHHHHHHhcCCCCCCcc
Confidence            999999999865432211        01233468899999999986    678999999999999999998 99999877


Q ss_pred             CH-HHHHHHHHcCCCCCcchHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHHHh
Q 003185          752 SE-LEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAGDLYEMFVA  830 (840)
Q Consensus       752 ~~-~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L~dLI~rCL~~DP~eRPSa~ELLehLe~  830 (840)
                      .. ..+...+.....+..+.                           ..++.+.+||.+||+.||.+|||+.+|++||+.
T Consensus       300 ~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~  352 (359)
T 3vhe_A          300 KIDEEFCRRLKEGTRMRAPD---------------------------YTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGN  352 (359)
T ss_dssp             CCSHHHHHHHHHTCCCCCCT---------------------------TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             chhHHHHHHHHcCCCCCCCC---------------------------CCCHHHHHHHHHHccCChhhCCCHHHHHHHHHH
Confidence            54 33444444443333321                           124578999999999999999999999999998


Q ss_pred             hcC
Q 003185          831 RTS  833 (840)
Q Consensus       831 l~~  833 (840)
                      +.+
T Consensus       353 ~~~  355 (359)
T 3vhe_A          353 LLQ  355 (359)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            864


No 52 
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00  E-value=1.5e-41  Score=364.38  Aligned_cols=290  Identities=21%  Similarity=0.212  Sum_probs=210.3

Q ss_pred             CCCCCceeeeeecccCceEEEEEEE--CCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCC---CCCcceeeeE
Q 003185          502 GSFPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALR---HSCIVEMYGH  576 (840)
Q Consensus       502 ~~~~~y~i~~~LG~G~fG~Vy~a~~--~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~---HpNIV~l~g~  576 (840)
                      ...++|++.+.||+|+||+||+|.+  .+..||+|++..........   .....+.+|+.++++++   ||||++++++
T Consensus         6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~---~~~~~~~~e~~~l~~l~~~~h~niv~~~~~   82 (308)
T 3g33_A            6 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGG---GLPISTVREVALLRRLEAFEHPNVVRLMDV   82 (308)
T ss_dssp             ----CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSS---CCCHHHHHHHHHHHHHHHHCCTTBCCEEEE
T ss_pred             ccccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEeccccccccc---ccchhHHHHHHHHHHHhhcCCCCeEEeeee
Confidence            3457999999999999999999995  67889999976543221111   11122367777776664   9999999999


Q ss_pred             EecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCCC
Q 003185          577 KISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSE  656 (840)
Q Consensus       577 ~~~~~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKPe  656 (840)
                      +......         .....++||||+. ++|.+++..   .....+++..++.++.||+.||+|||++||+||||||+
T Consensus        83 ~~~~~~~---------~~~~~~lv~e~~~-~~L~~~~~~---~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~  149 (308)
T 3g33_A           83 CATSRTD---------REIKVTLVFEHVD-QDLRTYLDK---APPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPE  149 (308)
T ss_dssp             EEECCSS---------SEEEEEEEEECCC-CBHHHHHHT---CCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCTT
T ss_pred             eeccCCC---------CceeEEEEehhhh-cCHHHHHhh---ccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHH
Confidence            9865421         2335799999997 599999975   22344999999999999999999999999999999999


Q ss_pred             cEEEecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHHH
Q 003185          657 NILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGC  736 (840)
Q Consensus       657 NILLd~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLGv  736 (840)
                      |||++.+       +.+||+|||+++.......           .....||+.|+|||++.+    ..++.++|||||||
T Consensus       150 Nil~~~~-------~~~kl~Dfg~a~~~~~~~~-----------~~~~~gt~~y~aPE~~~~----~~~~~~~DiwslG~  207 (308)
T 3g33_A          150 NILVTSG-------GTVKLADFGLARIYSYQMA-----------LTPVVVTLWYRAPEVLLQ----STYATPVDMWSVGC  207 (308)
T ss_dssp             TEEECTT-------SCEEECSCSCTTTSTTCCC-----------SGGGGCCCSSCCHHHHHT----SCCCSTHHHHHHHH
T ss_pred             HEEEcCC-------CCEEEeeCccccccCCCcc-----------cCCccccccccCchHHcC----CCCCchHHHHHHHH
Confidence            9999877       4699999999976543211           133569999999999986    66899999999999


Q ss_pred             HHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCcchHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCC
Q 003185          737 LLLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPT  816 (840)
Q Consensus       737 IL~ELLTG~~PF~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L~dLI~rCL~~DP~  816 (840)
                      ++|+|++|+.||.+.+..+....+...........+..........+.. .............++.+.+||.+||+.||.
T Consensus       208 il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~li~~~L~~dP~  286 (308)
T 3g33_A          208 IFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSLPRGAFPP-RGPRPVQSVVPEMEESGAQLLLEMLTFNPH  286 (308)
T ss_dssp             HHHHTTTSSCSCCCSSHHHHHHHHHHHHCCCCTTTSCSSCSSCGGGSCC-CCCCCHHHHSCSCCHHHHHHHHHHTCSSTT
T ss_pred             HHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccchhhccccccCC-CCCCcHHHhCccccHHHHHHHHHHhcCCCc
Confidence            9999999999999988887776665432111111111110000000000 000011112234567899999999999999


Q ss_pred             CCCCHHHHHHHHHh
Q 003185          817 ERPTAGDLYEMFVA  830 (840)
Q Consensus       817 eRPSa~ELLehLe~  830 (840)
                      +|||+.|+++|.+-
T Consensus       287 ~R~t~~e~l~h~~~  300 (308)
T 3g33_A          287 KRISAFRALQHSYL  300 (308)
T ss_dssp             TSCCHHHHHTSTTC
T ss_pred             cCCCHHHHhcCccc
Confidence            99999999998543


No 53 
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00  E-value=2.9e-41  Score=375.25  Aligned_cols=266  Identities=24%  Similarity=0.366  Sum_probs=217.3

Q ss_pred             CCCCCceeeeeecccCceEEEEEEECC---------eeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhC-CCCCcc
Q 003185          502 GSFPSLSSCDEAGKSVSSSLFRCKFGS---------ADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIV  571 (840)
Q Consensus       502 ~~~~~y~i~~~LG~G~fG~Vy~a~~~~---------~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L-~HpNIV  571 (840)
                      ...++|.+.+.||+|+||.||+|.+.+         ..+|+|+....   ......+    .+.+|+.+++++ +|||||
T Consensus        66 i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~----~~~~E~~~l~~l~~hpnIv  138 (382)
T 3tt0_A           66 LPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSD---ATEKDLS----DLISEMEMMKMIGKHKNII  138 (382)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTT---CCHHHHH----HHHHHHHHHHHHCCCTTBC
T ss_pred             cchhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccc---cCHHHHH----HHHHHHHHHHHhcCCchhh
Confidence            456789999999999999999999632         46899986432   2233333    348999999999 899999


Q ss_pred             eeeeEEecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhcc-----------CCCCCCHHHHHHHHHHHHHHH
Q 003185          572 EMYGHKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSET-----------GEKHVSVKLALFIAQDVAAAL  640 (840)
Q Consensus       572 ~l~g~~~~~~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~-----------~~~~ls~~~~~~Ia~QIa~AL  640 (840)
                      ++++++......              +|||||+++|+|.+++......           ....+++..++.|+.||+.||
T Consensus       139 ~~~~~~~~~~~~--------------~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL  204 (382)
T 3tt0_A          139 NLLGACTQDGPL--------------YVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGM  204 (382)
T ss_dssp             CEEEEECSSSSC--------------EEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHH
T ss_pred             hheeeeccCCce--------------EEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHH
Confidence            999999876544              9999999999999999873211           124589999999999999999


Q ss_pred             HHHHhCCeecccCCCCcEEEecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhccc
Q 003185          641 VELHSKHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMH  720 (840)
Q Consensus       641 ~yLHs~gIVHRDLKPeNILLd~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~  720 (840)
                      .|||++||+||||||+||||+.+       +.+||+|||+++........        .......+|+.|+|||++.+  
T Consensus       205 ~~LH~~~ivH~Dlkp~NIll~~~-------~~~kL~DFG~a~~~~~~~~~--------~~~~~~~~t~~y~aPE~~~~--  267 (382)
T 3tt0_A          205 EYLASKKCIHRDLAARNVLVTED-------NVMKIADFGLARDIHHIDYY--------KKTTNGRLPVKWMAPEALFD--  267 (382)
T ss_dssp             HHHHHTTCCCSCCCGGGEEECTT-------CCEEECSCSCCCCSSCCCTT--------CCCTTCCCGGGGSCHHHHHS--
T ss_pred             HHHHhCCEecCCCCcceEEEcCC-------CcEEEcccCccccccccccc--------ccccCCCCCcceeCHHHhcC--
Confidence            99999999999999999999877       46999999999866432211        11223357889999999986  


Q ss_pred             CCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHcCCCCCcchHHhhhccCccccccccCCCCCCchhhhhh
Q 003185          721 KPNLYGLEVDIWSYGCLLLELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELET  799 (840)
Q Consensus       721 ~~~~~s~kSDVWSLGvIL~ELLT-G~~PF~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  799 (840)
                        ..++.++|||||||++|+|++ |..||.+....++...+..+..+..+.                           ..
T Consensus       268 --~~~~~~~DiwslG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~  318 (382)
T 3tt0_A          268 --RIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPS---------------------------NC  318 (382)
T ss_dssp             --CCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTCCCCCCS---------------------------SC
T ss_pred             --CCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCc---------------------------cC
Confidence              678999999999999999999 999999999888888887765443331                           12


Q ss_pred             HHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhcCC
Q 003185          800 LSFLVDVFRRCTEENPTERPTAGDLYEMFVARTSS  834 (840)
Q Consensus       800 s~~L~dLI~rCL~~DP~eRPSa~ELLehLe~l~~~  834 (840)
                      +..+.+||.+||+.||.+|||+.+|+++|+.+...
T Consensus       319 ~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~  353 (382)
T 3tt0_A          319 TNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVAL  353 (382)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHH
Confidence            45799999999999999999999999999988643


No 54 
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00  E-value=6.3e-42  Score=365.55  Aligned_cols=266  Identities=24%  Similarity=0.268  Sum_probs=204.0

Q ss_pred             CCCCCceeeeeecccCceEEEEEEE--CCeeEEEEEEecccCCCChH------------------HHHHhHHhHHHHHHH
Q 003185          502 GSFPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSAD------------------EIRNFEYSCLGEVRM  561 (840)
Q Consensus       502 ~~~~~y~i~~~LG~G~fG~Vy~a~~--~~~~vAVKI~~lk~~~~~~~------------------~~~~f~~~~~rEi~i  561 (840)
                      ..+++|++.+.||+|+||.||+|.+  .+..||+|+...........                  ......+.+.+|+.+
T Consensus        10 ~~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~   89 (298)
T 2zv2_A           10 VQLNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAI   89 (298)
T ss_dssp             CEETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHH
T ss_pred             eeecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHH
Confidence            5678999999999999999999987  57889999976443211100                  001112345899999


Q ss_pred             HHhCCCCCcceeeeEEecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHH
Q 003185          562 LGALRHSCIVEMYGHKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALV  641 (840)
Q Consensus       562 L~~L~HpNIV~l~g~~~~~~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~  641 (840)
                      |++++||||+++++++....            ....||||||+++++|.+++.      ...+++..++.++.||+.||.
T Consensus        90 l~~l~h~~iv~~~~~~~~~~------------~~~~~lv~e~~~~~~l~~~~~------~~~~~~~~~~~~~~qi~~~l~  151 (298)
T 2zv2_A           90 LKKLDHPNVVKLVEVLDDPN------------EDHLYMVFELVNQGPVMEVPT------LKPLSEDQARFYFQDLIKGIE  151 (298)
T ss_dssp             HHTCCCTTBCCEEEEEECSS------------SSEEEEEEECCTTCBSCCSSC------SSCCCHHHHHHHHHHHHHHHH
T ss_pred             HHhCCCCCCCeEEEEEEcCC------------CCEEEEEEecCCCCcHHHHhh------cCCCCHHHHHHHHHHHHHHHH
Confidence            99999999999999987532            124699999999999987643      357999999999999999999


Q ss_pred             HHHhCCeecccCCCCcEEEecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccC
Q 003185          642 ELHSKHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHK  721 (840)
Q Consensus       642 yLHs~gIVHRDLKPeNILLd~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~  721 (840)
                      |||++||+||||||+|||++.+       +.+||+|||+++........          .....||+.|+|||++.+.. 
T Consensus       152 ~lH~~~ivH~Dlkp~Nil~~~~-------~~~kl~Dfg~~~~~~~~~~~----------~~~~~gt~~y~aPE~~~~~~-  213 (298)
T 2zv2_A          152 YLHYQKIIHRDIKPSNLLVGED-------GHIKIADFGVSNEFKGSDAL----------LSNTVGTPAFMAPESLSETR-  213 (298)
T ss_dssp             HHHHTTEECCCCCGGGEEECTT-------SCEEECCCTTCEECSSSSCE----------ECCCCSCGGGCCGGGCCTTC-
T ss_pred             HHHHCCeeccCCCHHHEEECCC-------CCEEEecCCCcccccccccc----------ccCCcCCccccChhhhccCC-
Confidence            9999999999999999999877       45999999999876432211          12246999999999987511 


Q ss_pred             CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCcchHHhhhccCccccccccCCCCCCchhhhhhHH
Q 003185          722 PNLYGLEVDIWSYGCLLLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLS  801 (840)
Q Consensus       722 ~~~~s~kSDVWSLGvIL~ELLTG~~PF~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~  801 (840)
                      ...++.++|||||||++|+|++|+.||.......+...+...... ++.                         ....++
T Consensus       214 ~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~-~~~-------------------------~~~~~~  267 (298)
T 2zv2_A          214 KIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMCLHSKIKSQALE-FPD-------------------------QPDIAE  267 (298)
T ss_dssp             CCEESHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCC-CCS-------------------------SSCCCH
T ss_pred             CCCCCchhhhHhHHHHHHHHHHCCCCCCCccHHHHHHHHhcccCC-CCC-------------------------ccccCH
Confidence            012478999999999999999999999988777776666554221 110                         012345


Q ss_pred             HHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 003185          802 FLVDVFRRCTEENPTERPTAGDLYEMFV  829 (840)
Q Consensus       802 ~L~dLI~rCL~~DP~eRPSa~ELLehLe  829 (840)
                      .+.+||.+||+.||.+|||+.||++|.+
T Consensus       268 ~l~~li~~~l~~dp~~R~s~~e~l~hp~  295 (298)
T 2zv2_A          268 DLKDLITRMLDKNPESRIVVPEIKLHPW  295 (298)
T ss_dssp             HHHHHHHHHTCSCTTTSCCHHHHTTCHH
T ss_pred             HHHHHHHHHhhcChhhCCCHHHHhcCcc
Confidence            7999999999999999999999999864


No 55 
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00  E-value=3.9e-41  Score=351.91  Aligned_cols=259  Identities=21%  Similarity=0.330  Sum_probs=214.4

Q ss_pred             CCCCCceeeeeecccCceEEEEEEE-CCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeEEecC
Q 003185          502 GSFPSLSSCDEAGKSVSSSLFRCKF-GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISS  580 (840)
Q Consensus       502 ~~~~~y~i~~~LG~G~fG~Vy~a~~-~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~l~g~~~~~  580 (840)
                      +..++|++.+.||+|+||.||+|.+ ++..+|+|++.....  .   .+    .+.+|+.++++++||||+++++++...
T Consensus         5 i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~--~---~~----~~~~e~~~l~~l~h~~i~~~~~~~~~~   75 (267)
T 3t9t_A            5 IDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM--S---EE----DFIEEAEVMMKLSHPKLVQLYGVCLEQ   75 (267)
T ss_dssp             CCGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTB--C---HH----HHHHHHHHHHTCCCTTBCCEEEEECSS
T ss_pred             EchhheeeeeEecCCCceeEEEEEecCCCeEEEEEccccCC--C---HH----HHHHHHHHHHhCCCCCEeeEEEEEccC
Confidence            3457899999999999999999998 667899999753321  1   12    348999999999999999999999865


Q ss_pred             CCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCCCcEEE
Q 003185          581 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILI  660 (840)
Q Consensus       581 ~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKPeNILL  660 (840)
                      ..              .++||||+++++|.+++..    ....+++..++.++.||+.||.|||++||+||||||+|||+
T Consensus        76 ~~--------------~~lv~e~~~~~~L~~~~~~----~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nili  137 (267)
T 3t9t_A           76 AP--------------ICLVTEFMEHGCLSDYLRT----QRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLV  137 (267)
T ss_dssp             SS--------------CEEEECCCTTCBHHHHHHH----TTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEE
T ss_pred             CC--------------eEEEEeCCCCCcHHHHHhh----CcccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEE
Confidence            54              3999999999999999976    23468999999999999999999999999999999999999


Q ss_pred             ecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHHHHHHH
Q 003185          661 DLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLE  740 (840)
Q Consensus       661 d~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLGvIL~E  740 (840)
                      +.+       +.+||+|||++..........         .....+|+.|+|||++.+    ..++.++||||||+++|+
T Consensus       138 ~~~-------~~~kl~dfg~~~~~~~~~~~~---------~~~~~~~~~y~aPE~~~~----~~~~~~~Di~slG~il~~  197 (267)
T 3t9t_A          138 GEN-------QVIKVSDFGMTRFVLDDQYTS---------STGTKFPVKWASPEVFSF----SRYSSKSDVWSFGVLMWE  197 (267)
T ss_dssp             CGG-------GCEEECCTTGGGGBCCHHHHS---------TTSTTCCGGGCCHHHHHH----CCCCHHHHHHHHHHHHHH
T ss_pred             CCC-------CCEEEcccccccccccccccc---------cccccccccccChhhhcC----CCccchhchhhhHHHHHH
Confidence            877       459999999998664321110         122357889999999986    568999999999999999


Q ss_pred             HHh-CCCCCCCCCHHHHHHHHHcCCCCCcchHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC
Q 003185          741 LLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP  819 (840)
Q Consensus       741 LLT-G~~PF~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L~dLI~rCL~~DP~eRP  819 (840)
                      |++ |..||......+....+..+..+..+.                           ..+..+.+|+.+||..||.+||
T Consensus       198 l~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~---------------------------~~~~~l~~li~~~l~~~p~~Rp  250 (267)
T 3t9t_A          198 VFSEGKIPYENRSNSEVVEDISTGFRLYKPR---------------------------LASTHVYQIMNHCWRERPEDRP  250 (267)
T ss_dssp             HHTTSCCTTTTCCHHHHHHHHHTTCCCCCCT---------------------------TSCHHHHHHHHHHTCSSGGGSC
T ss_pred             HhccCCCCCCCCCHHHHHHHHhcCCcCCCCc---------------------------cCcHHHHHHHHHHccCChhhCc
Confidence            999 899999988888887777664433221                           1245789999999999999999


Q ss_pred             CHHHHHHHHHhhcCC
Q 003185          820 TAGDLYEMFVARTSS  834 (840)
Q Consensus       820 Sa~ELLehLe~l~~~  834 (840)
                      |+.+++++|+.+...
T Consensus       251 s~~~ll~~L~~l~~~  265 (267)
T 3t9t_A          251 AFSRLLRQLAEIAES  265 (267)
T ss_dssp             CHHHHHHHHHHHHHC
T ss_pred             CHHHHHHHHHHHHhc
Confidence            999999999988654


No 56 
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00  E-value=2.2e-41  Score=385.27  Aligned_cols=256  Identities=25%  Similarity=0.378  Sum_probs=214.3

Q ss_pred             CCCCCceeeeeecccCceEEEEEEECCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeEEecCC
Q 003185          502 GSFPSLSSCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK  581 (840)
Q Consensus       502 ~~~~~y~i~~~LG~G~fG~Vy~a~~~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~l~g~~~~~~  581 (840)
                      +..++|++.+.||+|+||.||+|.+.+..||||+.....      ..+    .+.+|+.+|++++|||||++++++....
T Consensus       190 i~~~~~~~~~~lG~G~fg~V~~~~~~~~~vavK~~~~~~------~~~----~~~~E~~~l~~l~h~niv~~~~~~~~~~  259 (450)
T 1k9a_A          190 LNMKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKNDA------TAQ----AFLAEASVMTQLRHSNLVQLLGVIVEEK  259 (450)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEETTEEEEEEEESSCT------TSH----HHHHHHHHHHTCCCTTBCCEEEEEECTT
T ss_pred             cChHHeEEEeeecCcCCeeEEEEEecCCeEEEEEeCCch------HHH----HHHHHHHHHHhccCCCEEEEEEEEEcCC
Confidence            567889999999999999999999999999999965321      122    3489999999999999999999987543


Q ss_pred             CCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCCCcEEEe
Q 003185          582 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID  661 (840)
Q Consensus       582 ~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKPeNILLd  661 (840)
                      .             ..||||||+++|+|.+++...   +...+++..++.++.||+.||+|||++||+||||||+|||++
T Consensus       260 ~-------------~~~iv~e~~~~g~L~~~l~~~---~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~  323 (450)
T 1k9a_A          260 G-------------GLYIVTEYMAKGSLVDYLRSR---GRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVS  323 (450)
T ss_dssp             S-------------CEEEEEECCTTCBHHHHHHHH---CTTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEC
T ss_pred             C-------------ceEEEEEecCCCcHHHHHHhc---CCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEEC
Confidence            1             259999999999999999862   334579999999999999999999999999999999999998


Q ss_pred             cccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHHHHHHHH
Q 003185          662 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL  741 (840)
Q Consensus       662 ~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLGvIL~EL  741 (840)
                      .+       +.+||+|||+++......             ....+++.|+|||++.+    ..++.++|||||||+||||
T Consensus       324 ~~-------~~~kl~DfG~a~~~~~~~-------------~~~~~~~~y~aPE~~~~----~~~~~~sDvwslG~~l~el  379 (450)
T 1k9a_A          324 ED-------NVAKVSDFGLTKEASSTQ-------------DTGKLPVKWTAPEALRE----KKFSTKSDVWSFGILLWEI  379 (450)
T ss_dssp             TT-------SCEEECCCTTCEECC-------------------CCCTTTSCHHHHHS----SCCCHHHHHHHHHHHHHHH
T ss_pred             CC-------CCEEEeeCCCcccccccc-------------cCCCCCcceeCHHHhcC----CCCCcHHHHHHHHHHHHHH
Confidence            77       469999999997543211             11247889999999986    6789999999999999999


Q ss_pred             Hh-CCCCCCCCCHHHHHHHHHcCCCCCcchHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCC
Q 003185          742 LT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPT  820 (840)
Q Consensus       742 LT-G~~PF~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L~dLI~rCL~~DP~eRPS  820 (840)
                      +| |..||.+.+..++...+..+.++..+.                           .+++.+.+||.+||..||.+|||
T Consensus       380 ~t~g~~P~~~~~~~~~~~~i~~~~~~~~p~---------------------------~~~~~l~~li~~cl~~dp~~Rpt  432 (450)
T 1k9a_A          380 YSFGRVPYPRIPLKDVVPRVEKGYKMDAPD---------------------------GCPPAVYDVMKNCWHLDAATRPT  432 (450)
T ss_dssp             HTTTCCSSTTSCTTTHHHHHHTTCCCCCCT---------------------------TCCHHHHHHHHHHTCSSGGGSCC
T ss_pred             HhCCCCCCCCCCHHHHHHHHHcCCCCCCCC---------------------------cCCHHHHHHHHHHcCCChhHCcC
Confidence            98 999999888878877777765543332                           13557999999999999999999


Q ss_pred             HHHHHHHHHhhcCC
Q 003185          821 AGDLYEMFVARTSS  834 (840)
Q Consensus       821 a~ELLehLe~l~~~  834 (840)
                      +.+|++.|+.+...
T Consensus       433 ~~~l~~~L~~i~~~  446 (450)
T 1k9a_A          433 FLQLREQLEHIRTH  446 (450)
T ss_dssp             HHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHh
Confidence            99999999988754


No 57 
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00  E-value=1.6e-41  Score=361.42  Aligned_cols=279  Identities=22%  Similarity=0.301  Sum_probs=203.1

Q ss_pred             CCCCCceeeeeecccCceEEEEEEE------CCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeee
Q 003185          502 GSFPSLSSCDEAGKSVSSSLFRCKF------GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYG  575 (840)
Q Consensus       502 ~~~~~y~i~~~LG~G~fG~Vy~a~~------~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~l~g  575 (840)
                      ..-++|++.+.||+|+||.||+|++      .+..||+|++...    .....+    .+.+|+.++++++||||+++++
T Consensus         7 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~----~~~~~~----~~~~E~~~l~~l~h~~iv~~~~   78 (295)
T 3ugc_A            7 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS----TEEHLR----DFEREIEILKSLQHDNIVKYKG   78 (295)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCC----CHHHHH----HHHHHHHHHHTCCCTTBCCEEE
T ss_pred             CCHHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccC----CHHHHH----HHHHHHHHHHhCCCCCEeeEEE
Confidence            4457899999999999999999985      5778999986422    233333    3489999999999999999999


Q ss_pred             EEecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCC
Q 003185          576 HKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKS  655 (840)
Q Consensus       576 ~~~~~~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKP  655 (840)
                      ++.....            ...++||||+++++|.+++..    ....+++..++.++.||+.||.|||++||+||||||
T Consensus        79 ~~~~~~~------------~~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp  142 (295)
T 3ugc_A           79 VCYSAGR------------RNLKLIMEYLPYGSLRDYLQK----HKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLAT  142 (295)
T ss_dssp             EECHHHH------------TSCEEEEECCTTCBHHHHHHH----CGGGCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSG
T ss_pred             EEecCCC------------CceEEEEEeCCCCCHHHHHHh----cccccCHHHHHHHHHHHHHHHHHHhcCCcccCCCCH
Confidence            9864321            135999999999999999986    224589999999999999999999999999999999


Q ss_pred             CcEEEecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHH
Q 003185          656 ENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYG  735 (840)
Q Consensus       656 eNILLd~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLG  735 (840)
                      +|||++.+       +.+||+|||++..........       .......+|..|+|||++.+    ..++.++||||||
T Consensus       143 ~Nil~~~~-------~~~kl~Dfg~~~~~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~----~~~~~~~Di~slG  204 (295)
T 3ugc_A          143 RNILVENE-------NRVKIGDFGLTKVLPQDKEFF-------KVKEPGESPIFWYAPESLTE----SKFSVASDVWSFG  204 (295)
T ss_dssp             GGEEEEET-------TEEEECCCCSCC--------------------CTTCGGGGCCHHHHHH----CCCCHHHHHHHHH
T ss_pred             hhEEEcCC-------CeEEEccCcccccccCCccee-------eeccCCCCccceeCcHHhcC----CCCChHHHHHHHH
Confidence            99999977       469999999998764432110       01122347788999999987    6789999999999


Q ss_pred             HHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCcch-HHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccC
Q 003185          736 CLLLELLTLQVPYMGLSELEIHDLIQMGKRPRLTD-ELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEEN  814 (840)
Q Consensus       736 vIL~ELLTG~~PF~~~~~~el~~~I~~~~~p~l~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L~dLI~rCL~~D  814 (840)
                      |++|||+||..||.... ......+.......... .+...        .....   .......+++.+.+||.+||+.|
T Consensus       205 ~~l~~l~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~---~~~~~~~~~~~l~~li~~~l~~d  272 (295)
T 3ugc_A          205 VVLYELFTYIEKSKSPP-AEFMRMIGNDKQGQMIVFHLIEL--------LKNNG---RLPRPDGCPDEIYMIMTECWNNN  272 (295)
T ss_dssp             HHHHHHHHTTCTTCSHH-HHHHHHHCTTCCTHHHHHHHHHH--------HHTTC---CCCCCTTCCHHHHHHHHHHSCSS
T ss_pred             HHHHHHHhcccccCCCh-HHHHhhhcCccccchhHHHHHHH--------HhccC---cCCCCcCcCHHHHHHHHHHcCCC
Confidence            99999999999986432 22222211111100000 00000        00000   00111234568999999999999


Q ss_pred             CCCCCCHHHHHHHHHhhcCC
Q 003185          815 PTERPTAGDLYEMFVARTSS  834 (840)
Q Consensus       815 P~eRPSa~ELLehLe~l~~~  834 (840)
                      |.+|||+.+|++.|+.+...
T Consensus       273 p~~Rps~~el~~~L~~l~~~  292 (295)
T 3ugc_A          273 VNQRPSFRDLALRVDQIRDN  292 (295)
T ss_dssp             GGGSCCHHHHHHHHHHHHHC
T ss_pred             hhhCCCHHHHHHHHHHHHHh
Confidence            99999999999999988654


No 58 
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00  E-value=1.6e-41  Score=366.30  Aligned_cols=291  Identities=20%  Similarity=0.238  Sum_probs=211.1

Q ss_pred             CCCceeeeeecccCceEEEEEEEC--CeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeEEecCC
Q 003185          504 FPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK  581 (840)
Q Consensus       504 ~~~y~i~~~LG~G~fG~Vy~a~~~--~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~l~g~~~~~~  581 (840)
                      -++|++.+.||+|+||.||+|.+.  +..||+|++.......   ..    ..+.+|+.+|++++||||+++++++....
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~---~~----~~~~~E~~~l~~l~h~~iv~~~~~~~~~~   80 (319)
T 4euu_A            8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLR---PV----DVQMREFEVLKKLNHKNIVKLFAIEEETT   80 (319)
T ss_dssp             SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGS---CH----HHHHHHHHHHHHCCCTTBCCEEEEEECTT
T ss_pred             CCCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccc---hH----HHHHHHHHHHHhcCCCCcceEEEEeecCC
Confidence            467999999999999999999984  7889999975332111   12    23479999999999999999999987544


Q ss_pred             CCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCCCcEEEe
Q 003185          582 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID  661 (840)
Q Consensus       582 ~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKPeNILLd  661 (840)
                      .            ...+|||||+++++|.+++...  .....+++..++.++.||+.||.|||++||+||||||+|||+.
T Consensus        81 ~------------~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~  146 (319)
T 4euu_A           81 T------------RHKVLIMEFCPCGSLYTVLEEP--SNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRV  146 (319)
T ss_dssp             T------------CCEEEEEECCTTCBHHHHHHSG--GGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEE
T ss_pred             C------------ceEEEEEeCCCCCCHHHHHHHh--ccccCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEe
Confidence            2            1459999999999999999852  1223489999999999999999999999999999999999983


Q ss_pred             cccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhccc----CCCCCCchhhHHHHHHH
Q 003185          662 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMH----KPNLYGLEVDIWSYGCL  737 (840)
Q Consensus       662 ~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~----~~~~~s~kSDVWSLGvI  737 (840)
                      ...   +..+.+||+|||+++.......           .....||+.|+|||++....    ....++.++|||||||+
T Consensus       147 ~~~---~~~~~~kL~Dfg~a~~~~~~~~-----------~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~i  212 (319)
T 4euu_A          147 IGE---DGQSVYKLTDFGAARELEDDEQ-----------FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVT  212 (319)
T ss_dssp             ECT---TSCEEEEECCCTTCEECCTTCC-----------BCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHH
T ss_pred             ccC---CCCceEEEccCCCceecCCCCc-----------eeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHH
Confidence            221   1236799999999987644221           12346999999999986311    12567899999999999


Q ss_pred             HHHHHhCCCCCCCCC----HHHHHHHHHcCCCCCcchHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhccc
Q 003185          738 LLELLTLQVPYMGLS----ELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEE  813 (840)
Q Consensus       738 L~ELLTG~~PF~~~~----~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L~dLI~rCL~~  813 (840)
                      +|||++|+.||....    ..++...+..+..+.....+....   ...+................+..+.+||.+||+.
T Consensus       213 l~el~~g~~pf~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~  289 (319)
T 4euu_A          213 FYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAE---NGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEA  289 (319)
T ss_dssp             HHHHHHSSCSEECTTCGGGCHHHHHHHHHHCCTTCCEEEECST---TCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCC
T ss_pred             HHHHHhCCCCCCCCCccchhHHHHHHHhcCCCcccchhhhccc---CCccccCccCCcccccchhHHHHhHHHHHHhccC
Confidence            999999999996432    234444444433222211111100   0000000000011123355678899999999999


Q ss_pred             CCCCCCCHHHHHHHHHhhc
Q 003185          814 NPTERPTAGDLYEMFVART  832 (840)
Q Consensus       814 DP~eRPSa~ELLehLe~l~  832 (840)
                      ||.+|||++|+++|+....
T Consensus       290 dP~~R~s~~ell~h~~d~~  308 (319)
T 4euu_A          290 DQEKCWGFDQFFAETSDIL  308 (319)
T ss_dssp             CTTTSCCHHHHHHHHHHHT
T ss_pred             ChhhhccHHHhhhccHHHh
Confidence            9999999999999987643


No 59 
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00  E-value=3.5e-41  Score=358.33  Aligned_cols=268  Identities=24%  Similarity=0.361  Sum_probs=203.3

Q ss_pred             CCCCCceeeeeecccCceEEEEEEECCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHh--CCCCCcceeeeEEec
Q 003185          502 GSFPSLSSCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGA--LRHSCIVEMYGHKIS  579 (840)
Q Consensus       502 ~~~~~y~i~~~LG~G~fG~Vy~a~~~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~--L~HpNIV~l~g~~~~  579 (840)
                      ...++|++.+.||+|+||.||+|.+.+..||+|++...       ....+    .+|.+++..  ++||||+++++++..
T Consensus         5 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~-------~~~~~----~~e~~~~~~~~l~h~niv~~~~~~~~   73 (301)
T 3q4u_A            5 TVARDITLLECVGKGRYGEVWRGSWQGENVAVKIFSSR-------DEKSW----FRETELYNTVMLRHENILGFIASDMT   73 (301)
T ss_dssp             CCGGGCEEEEEEEECSSEEEEEEEETTEEEEEEEECGG-------GHHHH----HHHHHHHHHTCCCCTTBCCEEEEEEE
T ss_pred             cccCcEEEEEeeccCCCcEEEEEEECCEEEEEEEeccc-------cchhh----HHHHHHHHHhhccCcCeeeEEEeecc
Confidence            44578999999999999999999999999999997432       12222    556666666  789999999998765


Q ss_pred             CCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHH--------hCCeecc
Q 003185          580 SKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELH--------SKHIMHR  651 (840)
Q Consensus       580 ~~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLH--------s~gIVHR  651 (840)
                      ...          .....++||||+++|+|.++++.      ..+++..++.++.||+.||+|||        ++||+||
T Consensus        74 ~~~----------~~~~~~lv~e~~~~g~L~~~l~~------~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~  137 (301)
T 3q4u_A           74 SRH----------SSTQLWLITHYHEMGSLYDYLQL------TTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHR  137 (301)
T ss_dssp             EET----------TEEEEEEEECCCTTCBHHHHHTT------CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECS
T ss_pred             ccC----------CCceeEEehhhccCCCHHHHHhh------cccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecC
Confidence            321          12357999999999999999953      56999999999999999999999        9999999


Q ss_pred             cCCCCcEEEecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCC--CCCchh
Q 003185          652 DIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPN--LYGLEV  729 (840)
Q Consensus       652 DLKPeNILLd~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~--~~s~kS  729 (840)
                      ||||+|||++.+       +.+||+|||+++..........      .......||+.|+|||++.+.....  .++.++
T Consensus       138 Dlkp~Nill~~~-------~~~kl~Dfg~a~~~~~~~~~~~------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~  204 (301)
T 3q4u_A          138 DLKSKNILVKKN-------GQCCIADLGLAVMHSQSTNQLD------VGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRV  204 (301)
T ss_dssp             CCCGGGEEECTT-------SCEEECCCTTCEEEETTTTEEE------CCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHH
T ss_pred             CCChHhEEEcCC-------CCEEEeeCCCeeeccccccccc------ccccccccccceeChhhhcCcCCCCcccCCchh
Confidence            999999999877       4699999999986654322111      0112346999999999998621111  345799


Q ss_pred             hHHHHHHHHHHHHhC----------CCCCCCCC-----HHHHHHHHHcC-CCCCcchHHhhhccCccccccccCCCCCCc
Q 003185          730 DIWSYGCLLLELLTL----------QVPYMGLS-----ELEIHDLIQMG-KRPRLTDELEALGSCHEHEVAQSGSGFEKP  793 (840)
Q Consensus       730 DVWSLGvIL~ELLTG----------~~PF~~~~-----~~el~~~I~~~-~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~  793 (840)
                      |||||||++|||+||          ..||....     ...+...+... ..+.++..                      
T Consensus       205 DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------  262 (301)
T 3q4u_A          205 DIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFEDMRKVVCVDQQRPNIPNR----------------------  262 (301)
T ss_dssp             HHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGG----------------------
T ss_pred             hHHHHHHHHHHHHhhhcCccccccccccccccCCCCcchhhhhHHHhccCCCCCCChh----------------------
Confidence            999999999999999          88885432     12222222211 22222211                      


Q ss_pred             hhhhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhh
Q 003185          794 EAELETLSFLVDVFRRCTEENPTERPTAGDLYEMFVAR  831 (840)
Q Consensus       794 ~~~~~~s~~L~dLI~rCL~~DP~eRPSa~ELLehLe~l  831 (840)
                      ......+..+.+||.+||+.||.+|||+.+|++.|+.+
T Consensus       263 ~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i  300 (301)
T 3q4u_A          263 WFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI  300 (301)
T ss_dssp             GGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred             hccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence            11234567899999999999999999999999999876


No 60 
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00  E-value=2.9e-41  Score=364.06  Aligned_cols=273  Identities=19%  Similarity=0.310  Sum_probs=202.4

Q ss_pred             CCCCCceeeeeecccCceEEEEEEECCe-----eEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeE
Q 003185          502 GSFPSLSSCDEAGKSVSSSLFRCKFGSA-----DAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGH  576 (840)
Q Consensus       502 ~~~~~y~i~~~LG~G~fG~Vy~a~~~~~-----~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~l~g~  576 (840)
                      +..++|++.+.||+|+||.||+|.+...     .+|+|+.....  ......+    .+.+|+.++++++||||++++++
T Consensus        20 i~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~----~~~~E~~~l~~l~h~~iv~~~~~   93 (323)
T 3qup_A           20 IPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADI--IASSDIE----EFLREAACMKEFDHPHVAKLVGV   93 (323)
T ss_dssp             CC---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC--------CHHHH----HHHHHHHHHTTCCCTTBCCCCEE
T ss_pred             cChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccc--cCHHHHH----HHHHHHHHHHHCCCCceehhhce
Confidence            4567899999999999999999986332     68999864322  1223333    34899999999999999999999


Q ss_pred             EecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhc-cCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCC
Q 003185          577 KISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSE-TGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKS  655 (840)
Q Consensus       577 ~~~~~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~-~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKP  655 (840)
                      +......        ......++||||+.+|+|.+++..... .....+++..++.++.||+.||.|||++||+||||||
T Consensus        94 ~~~~~~~--------~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivH~Dikp  165 (323)
T 3qup_A           94 SLRSRAK--------GRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRNFIHRDLAA  165 (323)
T ss_dssp             EECC---------------CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSG
T ss_pred             eeccccc--------cCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcCCcccCCCCc
Confidence            9865422        112235999999999999999976322 1223589999999999999999999999999999999


Q ss_pred             CcEEEecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHH
Q 003185          656 ENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYG  735 (840)
Q Consensus       656 eNILLd~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLG  735 (840)
                      +|||++.+       +.+||+|||+++.........        ......+|+.|+|||++.+    ..++.++||||||
T Consensus       166 ~NIli~~~-------~~~kl~Dfg~a~~~~~~~~~~--------~~~~~~~~~~y~aPE~~~~----~~~~~~~Di~slG  226 (323)
T 3qup_A          166 RNCMLAED-------MTVCVADFGLSRKIYSGDYYR--------QGCASKLPVKWLALESLAD----NLYTVHSDVWAFG  226 (323)
T ss_dssp             GGEEECTT-------SCEEECCCCC-------------------------CCGGGCCHHHHHH----CCCCHHHHHHHHH
T ss_pred             ceEEEcCC-------CCEEEeecccccccccccccc--------ccccccCcccccCchhhcC----CCCCCccchhhHH
Confidence            99999877       469999999998664422110        1122347889999999987    6789999999999


Q ss_pred             HHHHHHHh-CCCCCCCCCHHHHHHHHHcCCCCCcchHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccC
Q 003185          736 CLLLELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEEN  814 (840)
Q Consensus       736 vIL~ELLT-G~~PF~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L~dLI~rCL~~D  814 (840)
                      |++|+|++ |..||.+....++...+.....+..+.                           ..+..+.+||.+||..|
T Consensus       227 ~il~ell~~g~~p~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~l~~li~~~l~~d  279 (323)
T 3qup_A          227 VTMWEIMTRGQTPYAGIENAEIYNYLIGGNRLKQPP---------------------------ECMEEVYDLMYQCWSAD  279 (323)
T ss_dssp             HHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCCCCCT---------------------------TCCHHHHHHHHHTTCSS
T ss_pred             HHHHHHHhCCCCCccccChHHHHHHHhcCCCCCCCC---------------------------ccCHHHHHHHHHHccCC
Confidence            99999999 999999988888777776654433221                           12457999999999999


Q ss_pred             CCCCCCHHHHHHHHHhhcCC
Q 003185          815 PTERPTAGDLYEMFVARTSS  834 (840)
Q Consensus       815 P~eRPSa~ELLehLe~l~~~  834 (840)
                      |.+|||+.++++.|+.+...
T Consensus       280 p~~Rps~~~l~~~l~~~l~~  299 (323)
T 3qup_A          280 PKQRPSFTCLRMELENILGH  299 (323)
T ss_dssp             GGGSCCHHHHHHHHHHHHHC
T ss_pred             hhhCcCHHHHHHHHHHHHHH
Confidence            99999999999999987644


No 61 
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00  E-value=1.5e-41  Score=359.55  Aligned_cols=265  Identities=21%  Similarity=0.346  Sum_probs=203.5

Q ss_pred             CCCCCceeeeeecccCceEEEEEEECC---------eeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcce
Q 003185          502 GSFPSLSSCDEAGKSVSSSLFRCKFGS---------ADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVE  572 (840)
Q Consensus       502 ~~~~~y~i~~~LG~G~fG~Vy~a~~~~---------~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~  572 (840)
                      +..++|.+.+.||+|+||.||+|.+..         ..+|+|+.....        ....+.+.+|+.++++++||||++
T Consensus         5 i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~--------~~~~~~~~~E~~~l~~l~h~~iv~   76 (289)
T 4fvq_A            5 IRNEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAH--------RNYSESFFEAASMMSKLSHKHLVL   76 (289)
T ss_dssp             CCGGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGG--------GGGHHHHHHHHHHHHTSCCTTBCC
T ss_pred             echhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhccccc--------HHHHHHHHHHHHHHHhCCCCCEeE
Confidence            456789999999999999999998633         468999864221        122334589999999999999999


Q ss_pred             eeeEEecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccc
Q 003185          573 MYGHKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRD  652 (840)
Q Consensus       573 l~g~~~~~~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRD  652 (840)
                      +++++......              ++||||+++++|.+++..    ....+++..++.++.||+.||.|||++||+|||
T Consensus        77 ~~~~~~~~~~~--------------~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~D  138 (289)
T 4fvq_A           77 NYGVCVCGDEN--------------ILVQEFVKFGSLDTYLKK----NKNCINILWKLEVAKQLAAAMHFLEENTLIHGN  138 (289)
T ss_dssp             EEEEECCTTCC--------------EEEEECCTTCBHHHHHHH----TGGGCCHHHHHHHHHHHHHHHHHHHHTTCCCCC
T ss_pred             EEEEEEeCCCC--------------EEEEECCCCCCHHHHHHh----CCCCCCHHHHHHHHHHHHHHHHHHhhCCeECCC
Confidence            99999866543              999999999999999986    223489999999999999999999999999999


Q ss_pred             CCCCcEEEeccccc-CCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhH
Q 003185          653 IKSENILIDLERKK-ADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDI  731 (840)
Q Consensus       653 LKPeNILLd~~~~~-~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDV  731 (840)
                      |||+|||++.++.. ......+||+|||++......              ....||+.|+|||++.+   ...++.++||
T Consensus       139 lkp~NIll~~~~~~~~~~~~~~kl~Dfg~~~~~~~~--------------~~~~~~~~y~aPE~~~~---~~~~~~~~Di  201 (289)
T 4fvq_A          139 VCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPK--------------DILQERIPWVPPECIEN---PKNLNLATDK  201 (289)
T ss_dssp             CCGGGEEEEECCBGGGTBCCEEEECCCCSCTTTSCH--------------HHHHHTTTTSCHHHHHC---GGGCCHHHHH
T ss_pred             cCcceEEEecCCcccccccceeeeccCcccccccCc--------------cccCCcCcccCHHHhCC---CCCCCchhHH
Confidence            99999999877421 112234999999998755332              12347899999999975   2457899999


Q ss_pred             HHHHHHHHHHHhC-CCCCCCCCHHHHHHHHHcCCCCCcchHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHh
Q 003185          732 WSYGCLLLELLTL-QVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRC  810 (840)
Q Consensus       732 WSLGvIL~ELLTG-~~PF~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L~dLI~rC  810 (840)
                      |||||++|||++| .+||.................  ++.                           ..+..+.+||.+|
T Consensus       202 wslG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~--~~~---------------------------~~~~~l~~li~~~  252 (289)
T 4fvq_A          202 WSFGTTLWEICSGGDKPLSALDSQRKLQFYEDRHQ--LPA---------------------------PKAAELANLINNC  252 (289)
T ss_dssp             HHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCC--CCC---------------------------CSSCTTHHHHHHH
T ss_pred             HHHHHHHHHHHcCCCCCccccchHHHHHHhhccCC--CCC---------------------------CCCHHHHHHHHHH
Confidence            9999999999995 555655555554444332211  110                           0123578999999


Q ss_pred             cccCCCCCCCHHHHHHHHHhhcCCCCCC
Q 003185          811 TEENPTERPTAGDLYEMFVARTSSSISS  838 (840)
Q Consensus       811 L~~DP~eRPSa~ELLehLe~l~~~~~s~  838 (840)
                      |+.||.+|||+.+++++|+.+..+..+.
T Consensus       253 l~~dp~~Rps~~~ll~~l~~l~~p~~~~  280 (289)
T 4fvq_A          253 MDYEPDHRPSFRAIIRDLNSLFTPDLVP  280 (289)
T ss_dssp             SCSSGGGSCCHHHHHHHHHTCC------
T ss_pred             cCCChhHCcCHHHHHHHHHHhcCCCCCC
Confidence            9999999999999999999998876544


No 62 
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00  E-value=2.2e-41  Score=362.57  Aligned_cols=281  Identities=23%  Similarity=0.287  Sum_probs=206.6

Q ss_pred             CCCceeeeeecccCceEEEEEEEC--CeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeEEecCC
Q 003185          504 FPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK  581 (840)
Q Consensus       504 ~~~y~i~~~LG~G~fG~Vy~a~~~--~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~l~g~~~~~~  581 (840)
                      +++|++.+.||+|+||.||+|.+.  +..+|+|++...  ......    .+.+.+|+.++++++||||+++++++....
T Consensus         2 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~----~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~   75 (311)
T 4agu_A            2 MEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLES--EDDPVI----KKIALREIRMLKQLKHPNLVNLLEVFRRKR   75 (311)
T ss_dssp             -CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCC--CC-HHH----HHHHHHHHHHHHHCCCTTBCCEEEEEEETT
T ss_pred             cccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeecc--ccchHH----HHHHHHHHHHHHhCCCCCccchhheeecCC
Confidence            578999999999999999999984  778999986432  222222    234489999999999999999999998655


Q ss_pred             CCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCCCcEEEe
Q 003185          582 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID  661 (840)
Q Consensus       582 ~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKPeNILLd  661 (840)
                      .              .++||||+++++|..++..     ...+++..++.++.||+.||.|||++||+||||||+|||++
T Consensus        76 ~--------------~~lv~e~~~~~~l~~~~~~-----~~~~~~~~~~~i~~~l~~~l~~lH~~~ivH~dlkp~Nil~~  136 (311)
T 4agu_A           76 R--------------LHLVFEYCDHTVLHELDRY-----QRGVPEHLVKSITWQTLQAVNFCHKHNCIHRDVKPENILIT  136 (311)
T ss_dssp             E--------------EEEEEECCSEEHHHHHHHT-----SSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC
T ss_pred             e--------------EEEEEEeCCCchHHHHHhh-----hcCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCChhhEEEc
Confidence            3              5999999999999988764     35689999999999999999999999999999999999998


Q ss_pred             cccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHHHHHHHH
Q 003185          662 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL  741 (840)
Q Consensus       662 ~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLGvIL~EL  741 (840)
                      .+       +.+||+|||++.........          .....||+.|+|||++.+   ...++.++|||||||++|+|
T Consensus       137 ~~-------~~~kl~Dfg~~~~~~~~~~~----------~~~~~~~~~y~aPE~~~~---~~~~~~~~Di~slG~il~~l  196 (311)
T 4agu_A          137 KH-------SVIKLCDFGFARLLTGPSDY----------YDDEVATRWYRSPELLVG---DTQYGPPVDVWAIGCVFAEL  196 (311)
T ss_dssp             TT-------SCEEECCCTTCEECC----------------------GGGCCHHHHHT---CSCCCTHHHHHHHHHHHHHH
T ss_pred             CC-------CCEEEeeCCCchhccCcccc----------cCCCcCCccccChHHHhc---CCCCCcchhhHHHHHHHHHH
Confidence            77       46999999999876432211          123468999999999975   35678999999999999999


Q ss_pred             HhCCCCCCCCCHHHHHHHHHcCCCCCcchHHhhhccCc---cccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCC
Q 003185          742 LTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCH---EHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTER  818 (840)
Q Consensus       742 LTG~~PF~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~---~~~~~~~~~~~~~~~~~~~~s~~L~dLI~rCL~~DP~eR  818 (840)
                      ++|..||.+....+....+........+..........   ....................+..+.+||.+||..||.+|
T Consensus       197 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R  276 (311)
T 4agu_A          197 LSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTER  276 (311)
T ss_dssp             HHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTCGGGTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTS
T ss_pred             HhCCCCCCCCCHHHHHHHHHHHhcccccccccccccccccccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhc
Confidence            99999999988877766665542222222111110000   000000000000011123456789999999999999999


Q ss_pred             CCHHHHHHHHH
Q 003185          819 PTAGDLYEMFV  829 (840)
Q Consensus       819 PSa~ELLehLe  829 (840)
                      ||++++++|.+
T Consensus       277 pt~~ell~hp~  287 (311)
T 4agu_A          277 LTCEQLLHHPY  287 (311)
T ss_dssp             CCHHHHHTSGG
T ss_pred             CCHHHHhcChH
Confidence            99999999854


No 63 
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00  E-value=3.9e-41  Score=366.54  Aligned_cols=252  Identities=25%  Similarity=0.331  Sum_probs=210.3

Q ss_pred             CCCCCceeeeeecccCceEEEEEEE--CCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeEEec
Q 003185          502 GSFPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKIS  579 (840)
Q Consensus       502 ~~~~~y~i~~~LG~G~fG~Vy~a~~--~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~l~g~~~~  579 (840)
                      ..+++|++.+.||+|+||.||+|+.  .+..+|+|+......     ......+.+.+|+.+++.++||||+++++++..
T Consensus         3 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~-----~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~   77 (318)
T 1fot_A            3 YSLQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIV-----VRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQD   77 (318)
T ss_dssp             CCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHH-----HHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEEC
T ss_pred             CChHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHh-----hhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEe
Confidence            4578999999999999999999997  578899999753211     011112345889999999999999999999986


Q ss_pred             CCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCCCcEE
Q 003185          580 SKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENIL  659 (840)
Q Consensus       580 ~~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKPeNIL  659 (840)
                      ...              .|+||||++||+|.+++..     ...+++..++.++.||+.||.|||++||+||||||+|||
T Consensus        78 ~~~--------------~~lv~e~~~gg~L~~~l~~-----~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIl  138 (318)
T 1fot_A           78 AQQ--------------IFMIMDYIEGGELFSLLRK-----SQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENIL  138 (318)
T ss_dssp             SSE--------------EEEEECCCCSCBHHHHHHH-----TSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEE
T ss_pred             CCE--------------EEEEEeCCCCCCHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChheEE
Confidence            553              5999999999999999986     356999999999999999999999999999999999999


Q ss_pred             EecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHHHHHH
Q 003185          660 IDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLL  739 (840)
Q Consensus       660 Ld~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLGvIL~  739 (840)
                      ++.+       +.+||+|||+++......             ....||+.|+|||++.+    ..++.++|||||||++|
T Consensus       139 l~~~-------g~~kL~Dfg~a~~~~~~~-------------~~~~gt~~y~aPE~~~~----~~~~~~~DiwslG~il~  194 (318)
T 1fot_A          139 LDKN-------GHIKITDFGFAKYVPDVT-------------YTLCGTPDYIAPEVVST----KPYNKSIDWWSFGILIY  194 (318)
T ss_dssp             ECTT-------SCEEECCCSSCEECSSCB-------------CCCCSCTTTCCHHHHTT----CCBCTTHHHHHHHHHHH
T ss_pred             EcCC-------CCEEEeecCcceecCCcc-------------ccccCCccccCHhHhcC----CCCCcccchhhhHHHHH
Confidence            9877       469999999998654311             23469999999999976    66899999999999999


Q ss_pred             HHHhCCCCCCCCCHHHHHHHHHcCCCCCcchHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC
Q 003185          740 ELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP  819 (840)
Q Consensus       740 ELLTG~~PF~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L~dLI~rCL~~DP~eRP  819 (840)
                      ||++|..||.+.+.......+..... .++.                           ..+..+.+||.+||..||.+||
T Consensus       195 ell~g~~pf~~~~~~~~~~~i~~~~~-~~p~---------------------------~~~~~~~~li~~lL~~dp~~R~  246 (318)
T 1fot_A          195 EMLAGYTPFYDSNTMKTYEKILNAEL-RFPP---------------------------FFNEDVKDLLSRLITRDLSQRL  246 (318)
T ss_dssp             HHHHSSCTTCCSSHHHHHHHHHHCCC-CCCT---------------------------TSCHHHHHHHHHHTCSCTTTCT
T ss_pred             HHHhCCCCCCCCCHHHHHHHHHhCCC-CCCC---------------------------CCCHHHHHHHHHHhccCHHHcC
Confidence            99999999999888888877766532 1111                           1245789999999999999999


Q ss_pred             -----CHHHHHHHHH
Q 003185          820 -----TAGDLYEMFV  829 (840)
Q Consensus       820 -----Sa~ELLehLe  829 (840)
                           ++++|++|..
T Consensus       247 ~~~~~~~~~i~~hp~  261 (318)
T 1fot_A          247 GNLQNGTEDVKNHPW  261 (318)
T ss_dssp             TSSTTTTHHHHTSGG
T ss_pred             CCcCCCHHHHhcCcc
Confidence                 9999999854


No 64 
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00  E-value=3.9e-41  Score=356.42  Aligned_cols=259  Identities=20%  Similarity=0.306  Sum_probs=200.4

Q ss_pred             CCCCCceeeeeecccCceEEEEEEEC-----CeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeE
Q 003185          502 GSFPSLSSCDEAGKSVSSSLFRCKFG-----SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGH  576 (840)
Q Consensus       502 ~~~~~y~i~~~LG~G~fG~Vy~a~~~-----~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~l~g~  576 (840)
                      +..++|++.+.||+|+||.||+|.+.     +..+|+|+..  .. ......    +.+.+|+.++++++||||++++++
T Consensus        12 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~--~~-~~~~~~----~~~~~e~~~l~~l~h~~iv~~~~~   84 (281)
T 1mp8_A           12 IQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCK--NC-TSDSVR----EKFLQEALTMRQFDHPHIVKLIGV   84 (281)
T ss_dssp             CCGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECT--TT-TSHHHH----HHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred             EehHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEecc--cc-CCHHHH----HHHHHHHHHHHhCCCCccceEEEE
Confidence            45678999999999999999999873     2347777643  21 122222    345899999999999999999999


Q ss_pred             EecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCCC
Q 003185          577 KISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSE  656 (840)
Q Consensus       577 ~~~~~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKPe  656 (840)
                      +... .              .++||||+++++|.+++..    ....+++..++.++.||+.||.|||++||+||||||+
T Consensus        85 ~~~~-~--------------~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~  145 (281)
T 1mp8_A           85 ITEN-P--------------VWIIMELCTLGELRSFLQV----RKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAAR  145 (281)
T ss_dssp             ECSS-S--------------CEEEEECCTTEEHHHHHHH----TTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGG
T ss_pred             EccC-c--------------cEEEEecCCCCCHHHHHHh----cCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHH
Confidence            7432 2              3999999999999999976    2346899999999999999999999999999999999


Q ss_pred             cEEEecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHHH
Q 003185          657 NILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGC  736 (840)
Q Consensus       657 NILLd~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLGv  736 (840)
                      |||++.+       +.+||+|||+++........         ......+|+.|+|||++.+    ..++.++|||||||
T Consensus       146 Nil~~~~-------~~~kl~Dfg~~~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~----~~~~~~~Di~slG~  205 (281)
T 1mp8_A          146 NVLVSSN-------DCVKLGDFGLSRYMEDSTYY---------KASKGKLPIKWMAPESINF----RRFTSASDVWMFGV  205 (281)
T ss_dssp             GEEEEET-------TEEEECC----------------------------CCGGGCCHHHHHH----CCCSHHHHHHHHHH
T ss_pred             HEEECCC-------CCEEECccccccccCccccc---------ccccCCCcccccChhhccc----CCCCCccCchHHHH
Confidence            9999977       46999999999876442211         1122357889999999986    67899999999999


Q ss_pred             HHHHHHh-CCCCCCCCCHHHHHHHHHcCCCCCcchHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCC
Q 003185          737 LLLELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENP  815 (840)
Q Consensus       737 IL~ELLT-G~~PF~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L~dLI~rCL~~DP  815 (840)
                      ++|||++ |..||.+....++...+.....+.++.                           ..+..+.+||.+||..||
T Consensus       206 ~l~ell~~g~~pf~~~~~~~~~~~i~~~~~~~~~~---------------------------~~~~~l~~li~~~l~~~p  258 (281)
T 1mp8_A          206 CMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPP---------------------------NCPPTLYSLMTKCWAYDP  258 (281)
T ss_dssp             HHHHHHTTSCCTTTTCCGGGHHHHHHTTCCCCCCT---------------------------TCCHHHHHHHHHHTCSSG
T ss_pred             HHHHHHhcCCCCCCcCCHHHHHHHHHcCCCCCCCC---------------------------CCCHHHHHHHHHHccCCh
Confidence            9999997 999999888877777777664433321                           124578999999999999


Q ss_pred             CCCCCHHHHHHHHHhhcC
Q 003185          816 TERPTAGDLYEMFVARTS  833 (840)
Q Consensus       816 ~eRPSa~ELLehLe~l~~  833 (840)
                      .+|||+.+|+++|+.+..
T Consensus       259 ~~Rps~~~l~~~l~~~~~  276 (281)
T 1mp8_A          259 SRRPRFTELKAQLSTILE  276 (281)
T ss_dssp             GGSCCHHHHHHHHHHHHH
T ss_pred             hhCcCHHHHHHHHHHHHH
Confidence            999999999999998753


No 65 
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00  E-value=3.4e-41  Score=366.07  Aligned_cols=255  Identities=27%  Similarity=0.451  Sum_probs=210.8

Q ss_pred             CceeeeeecccCceEEEEEEE--CCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeEEecCCCC
Q 003185          506 SLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWL  583 (840)
Q Consensus       506 ~y~i~~~LG~G~fG~Vy~a~~--~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~l~g~~~~~~~~  583 (840)
                      .|...+.||+|+||.||+|..  .+..||||+......    ...+    .+.+|+.++++++||||+++++++..... 
T Consensus        46 ~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~----~~~~----~~~~E~~~l~~l~h~niv~~~~~~~~~~~-  116 (321)
T 2c30_A           46 LLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQ----QRRE----LLFNEVVIMRDYQHFNVVEMYKSYLVGEE-  116 (321)
T ss_dssp             HEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC----CSHH----HHHHHHHHHTTCCCTTBCCEEEEEEETTE-
T ss_pred             hhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccch----hHHH----HHHHHHHHHHhCCCCCcceEEEEEEECCE-
Confidence            478888999999999999997  578999999764321    1122    34899999999999999999999986553 


Q ss_pred             CCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCCCcEEEecc
Q 003185          584 PSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLE  663 (840)
Q Consensus       584 p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKPeNILLd~~  663 (840)
                                   .++||||+++++|.+++..      ..+++..++.++.||+.||.|||++||+||||||+|||++.+
T Consensus       117 -------------~~lv~e~~~~~~L~~~l~~------~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~  177 (321)
T 2c30_A          117 -------------LWVLMEFLQGGALTDIVSQ------VRLNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSILLTLD  177 (321)
T ss_dssp             -------------EEEEECCCCSCBHHHHHTT------CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTT
T ss_pred             -------------EEEEEecCCCCCHHHHHHh------cCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCC
Confidence                         5999999999999999864      469999999999999999999999999999999999999877


Q ss_pred             cccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHHHHHHHHHh
Q 003185          664 RKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLT  743 (840)
Q Consensus       664 ~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLGvIL~ELLT  743 (840)
                             +.+||+|||++.........          .....||+.|+|||++.+    ..++.++|||||||++|+|++
T Consensus       178 -------~~~kl~Dfg~~~~~~~~~~~----------~~~~~gt~~y~aPE~~~~----~~~~~~~Dv~slG~il~el~~  236 (321)
T 2c30_A          178 -------GRVKLSDFGFCAQISKDVPK----------RKSLVGTPYWMAPEVISR----SLYATEVDIWSLGIMVIEMVD  236 (321)
T ss_dssp             -------CCEEECCCTTCEECCSSSCC----------BCCCCSCGGGCCHHHHTT----CCBCTHHHHHHHHHHHHHHHH
T ss_pred             -------CcEEEeeeeeeeecccCccc----------cccccCCccccCHhhhcC----CCCCchhhHHHHHHHHHHHHh
Confidence                   45999999999766432111          133469999999999976    668899999999999999999


Q ss_pred             CCCCCCCCCHHHHHHHHHcCCCCCcchHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHHH
Q 003185          744 LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAGD  823 (840)
Q Consensus       744 G~~PF~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L~dLI~rCL~~DP~eRPSa~E  823 (840)
                      |+.||.+....+....+.....+.+..                         ....+..+.+||.+||..||.+|||+.+
T Consensus       237 g~~pf~~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~l~~li~~~l~~dp~~Rps~~e  291 (321)
T 2c30_A          237 GEPPYFSDSPVQAMKRLRDSPPPKLKN-------------------------SHKVSPVLRDFLERMLVRDPQERATAQE  291 (321)
T ss_dssp             SSCTTTTSCHHHHHHHHHHSSCCCCTT-------------------------GGGSCHHHHHHHHHHSCSSTTTSCCHHH
T ss_pred             CCCCCCCCCHHHHHHHHhcCCCCCcCc-------------------------cccCCHHHHHHHHHHccCChhhCcCHHH
Confidence            999999888888777776654433221                         1123557899999999999999999999


Q ss_pred             HHHHHHhhcCC
Q 003185          824 LYEMFVARTSS  834 (840)
Q Consensus       824 LLehLe~l~~~  834 (840)
                      +++|..-....
T Consensus       292 ll~hp~~~~~~  302 (321)
T 2c30_A          292 LLDHPFLLQTG  302 (321)
T ss_dssp             HHTSGGGGGCC
T ss_pred             HhcChhhccCC
Confidence            99997765543


No 66 
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00  E-value=2.3e-41  Score=367.57  Aligned_cols=260  Identities=19%  Similarity=0.306  Sum_probs=205.8

Q ss_pred             CCCCCceeeeeecccCceEEEEEEE--CCee----EEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeee
Q 003185          502 GSFPSLSSCDEAGKSVSSSLFRCKF--GSAD----AAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYG  575 (840)
Q Consensus       502 ~~~~~y~i~~~LG~G~fG~Vy~a~~--~~~~----vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~l~g  575 (840)
                      ...++|++.+.||+|+||.||+|.+  .+..    +|+|.....   ...    .....+.+|+.++++++||||+++++
T Consensus        12 l~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~---~~~----~~~~~~~~E~~~l~~l~h~~iv~~~~   84 (327)
T 3poz_A           12 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA---TSP----KANKEILDEAYVMASVDNPHVCRLLG   84 (327)
T ss_dssp             CCGGGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC--------------CHHHHHHHHHHHHHCCBTTBCCEEE
T ss_pred             cCHHHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccc---cCH----HHHHHHHHHHHHHHhCCCCCEeEEEE
Confidence            4457899999999999999999997  3333    455553211   111    12234589999999999999999999


Q ss_pred             EEecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCC
Q 003185          576 HKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKS  655 (840)
Q Consensus       576 ~~~~~~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKP  655 (840)
                      ++....               .++||||+.+|+|.+++..    ....+++..++.|+.||+.||.|||++||+||||||
T Consensus        85 ~~~~~~---------------~~~v~e~~~~g~L~~~l~~----~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp  145 (327)
T 3poz_A           85 ICLTST---------------VQLITQLMPFGCLLDYVRE----HKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAA  145 (327)
T ss_dssp             EEESSS---------------EEEEEECCTTCBHHHHHHH----STTSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCG
T ss_pred             EEecCC---------------eEEEEEecCCCcHHHHHHh----cCCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCCh
Confidence            998543               4899999999999999976    235689999999999999999999999999999999


Q ss_pred             CcEEEecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHH
Q 003185          656 ENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYG  735 (840)
Q Consensus       656 eNILLd~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLG  735 (840)
                      +|||++.+       +.+||+|||+++.........        ......||+.|+|||++.+    ..++.++||||||
T Consensus       146 ~NIll~~~-------~~~kl~Dfg~a~~~~~~~~~~--------~~~~~~~t~~y~aPE~~~~----~~~~~~~Di~slG  206 (327)
T 3poz_A          146 RNVLVKTP-------QHVKITDFGLAKLLGAEEKEY--------HAEGGKVPIKWMALESILH----RIYTHQSDVWSYG  206 (327)
T ss_dssp             GGEEEEET-------TEEEECCTTHHHHHTTTCC---------------CCCGGGSCHHHHHH----CCCCHHHHHHHHH
T ss_pred             heEEECCC-------CCEEEccCcceeEccCCcccc--------cccCCCccccccChHHhcc----CCCCchhhhhhhH
Confidence            99999877       469999999998764432211        1122357889999999987    6789999999999


Q ss_pred             HHHHHHHh-CCCCCCCCCHHHHHHHHHcCCCCCcchHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccC
Q 003185          736 CLLLELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEEN  814 (840)
Q Consensus       736 vIL~ELLT-G~~PF~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L~dLI~rCL~~D  814 (840)
                      |++|||+| |..||.+....++...+........+.                           ..+..+.+|+.+||+.|
T Consensus       207 ~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~li~~~l~~~  259 (327)
T 3poz_A          207 VTVWELMTFGSKPYDGIPASEISSILEKGERLPQPP---------------------------ICTIDVYMIMVKCWMID  259 (327)
T ss_dssp             HHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCCCCCT---------------------------TBCHHHHHHHHHHTCSC
T ss_pred             HHHHHHHhcCCCCccCCCHHHHHHHHHcCCCCCCCc---------------------------cCCHHHHHHHHHHcCCC
Confidence            99999999 999999888877777776664433221                           12457899999999999


Q ss_pred             CCCCCCHHHHHHHHHhhcC
Q 003185          815 PTERPTAGDLYEMFVARTS  833 (840)
Q Consensus       815 P~eRPSa~ELLehLe~l~~  833 (840)
                      |.+||++.+|+++|+.+..
T Consensus       260 p~~Rps~~ell~~l~~~~~  278 (327)
T 3poz_A          260 ADSRPKFRELIIEFSKMAR  278 (327)
T ss_dssp             GGGSCCHHHHHHHHHHHHT
T ss_pred             hhhCCCHHHHHHHHHHHHh
Confidence            9999999999999988754


No 67 
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00  E-value=4.1e-41  Score=358.13  Aligned_cols=267  Identities=24%  Similarity=0.396  Sum_probs=199.5

Q ss_pred             CCCCCceeeeeecccCceEEEEEEECCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeEEecCC
Q 003185          502 GSFPSLSSCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK  581 (840)
Q Consensus       502 ~~~~~y~i~~~LG~G~fG~Vy~a~~~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~l~g~~~~~~  581 (840)
                      +.-++|++.+.||+|+||.||+|.+.+ .+|+|++...  .......+.+    .+|+.++++++||||++++++.... 
T Consensus        21 i~~~~y~~~~~lG~G~~g~Vy~~~~~~-~vavK~~~~~--~~~~~~~~~~----~~E~~~l~~l~h~~iv~~~~~~~~~-   92 (289)
T 3og7_A           21 IPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVT--APTPQQLQAF----KNEVGVLRKTRHVNILLFMGYSTAP-   92 (289)
T ss_dssp             CCTTSCEEEEEEEECSSEEEEEEESSS-EEEEEEESCS--SCCHHHHHHH----HHHHHHHTTCCCTTBCCEEEEECSS-
T ss_pred             cCccceeeeeEecCCCCeEEEEEEEcC-ceEEEEEecc--CCCHHHHHHH----HHHHHHHHhCCCCcEEEEEeeccCC-
Confidence            556789999999999999999999766 4899986543  2333344444    8999999999999999999975432 


Q ss_pred             CCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCCCcEEEe
Q 003185          582 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID  661 (840)
Q Consensus       582 ~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKPeNILLd  661 (840)
                                    ..++||||+.+++|.+++..    ....+++..++.++.||+.||.|||++||+||||||+|||++
T Consensus        93 --------------~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~Dlkp~Nil~~  154 (289)
T 3og7_A           93 --------------QLAIVTQWCEGSSLYHHLHA----SETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLH  154 (289)
T ss_dssp             --------------SCEEEEECCCEEEHHHHHTT----C---CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEE
T ss_pred             --------------ccEEEEEecCCCcHHHHHhh----ccCCCCHHHHHHHHHHHHHHHHHHHhCCcccccCccceEEEC
Confidence                          24999999999999999864    235689999999999999999999999999999999999999


Q ss_pred             cccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHHHHHHHH
Q 003185          662 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL  741 (840)
Q Consensus       662 ~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLGvIL~EL  741 (840)
                      .+       +.+||+|||++.........        .......||+.|+|||++... ....++.++|||||||++|+|
T Consensus       155 ~~-------~~~kl~Dfg~~~~~~~~~~~--------~~~~~~~gt~~y~aPE~~~~~-~~~~~~~~~Di~slG~il~el  218 (289)
T 3og7_A          155 ED-------NTVKIGDFGLATEKSRWSGS--------HQFEQLSGSILWMAPEVIRMQ-DSNPYSFQSDVYAFGIVLYEL  218 (289)
T ss_dssp             TT-------TEEEECCCC--------------------------CCCTTCCHHHHC-----CCSCHHHHHHHHHHHHHHH
T ss_pred             CC-------CCEEEccceecccccccccc--------ccccccCCCccccCchhhccc-CCCCCCcccchHHHHHHHHHH
Confidence            77       46999999999765432111        112234699999999998632 125678999999999999999


Q ss_pred             HhCCCCCCCCCH-HHHHHHHHcCCCCCcchHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCC
Q 003185          742 LTLQVPYMGLSE-LEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPT  820 (840)
Q Consensus       742 LTG~~PF~~~~~-~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L~dLI~rCL~~DP~eRPS  820 (840)
                      ++|+.||.+... ..+...+.....+....                       .....+++.+.+||.+||..||.+|||
T Consensus       219 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~l~~li~~~l~~~p~~Rps  275 (289)
T 3og7_A          219 MTGQLPYSNINNRDQIIEMVGRGSLSPDLS-----------------------KVRSNCPKRMKRLMAECLKKKRDERPS  275 (289)
T ss_dssp             HHSSCTTSSCCCHHHHHHHHHHTSCCCCTT-----------------------SSCTTSCHHHHHHHHHHTCSSGGGSCC
T ss_pred             HHCCCCccccchHHHHHHHhcccccCcchh-----------------------hccccCCHHHHHHHHHHccCChhhCCC
Confidence            999999987644 44445554443211110                       011223568999999999999999999


Q ss_pred             HHHHHHHHHhhcC
Q 003185          821 AGDLYEMFVARTS  833 (840)
Q Consensus       821 a~ELLehLe~l~~  833 (840)
                      +.+|++.|+.+..
T Consensus       276 ~~ell~~L~~l~~  288 (289)
T 3og7_A          276 FPRILAEIEELAR  288 (289)
T ss_dssp             HHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHhh
Confidence            9999999998764


No 68 
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00  E-value=5.9e-41  Score=362.80  Aligned_cols=285  Identities=21%  Similarity=0.306  Sum_probs=196.0

Q ss_pred             CCCCceeeeeecccCceEEEEEEE--CCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeEEecC
Q 003185          503 SFPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISS  580 (840)
Q Consensus       503 ~~~~y~i~~~LG~G~fG~Vy~a~~--~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~l~g~~~~~  580 (840)
                      ..++|++.+.||+|+||.||+|.+  .+..||+|++.......   ..    ..+.+|+.+|++++||||+++++++...
T Consensus         3 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~---~~----~~~~~E~~~l~~l~hp~iv~~~~~~~~~   75 (317)
T 2pmi_A            3 SSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEG---TP----STAIREISLMKELKHENIVRLYDVIHTE   75 (317)
T ss_dssp             ----------------CEEEEEECSSSCCEEEEEEEECCSTTC---SC----HHHHHHHHHHTTCCBTTBCCEEEEECCT
T ss_pred             cccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccc---cH----HHHHHHHHHHHhcCCCCcceEEEEEEEC
Confidence            356899999999999999999987  47889999976543211   11    2348899999999999999999998765


Q ss_pred             CCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhc-cCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCCCcEE
Q 003185          581 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSE-TGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENIL  659 (840)
Q Consensus       581 ~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~-~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKPeNIL  659 (840)
                      .              ..+|||||++ ++|.+++..... .....+++..++.++.||+.||.|||++||+||||||+|||
T Consensus        76 ~--------------~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl  140 (317)
T 2pmi_A           76 N--------------KLTLVFEFMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENKILHRDLKPQNLL  140 (317)
T ss_dssp             T--------------EEEEEEECCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEE
T ss_pred             C--------------eEEEEEEecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCChHHeE
Confidence            4              3599999998 599999976322 12245899999999999999999999999999999999999


Q ss_pred             EecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHHHHHH
Q 003185          660 IDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLL  739 (840)
Q Consensus       660 Ld~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLGvIL~  739 (840)
                      ++.+       +.+||+|||+++........          .....||+.|+|||++.+   ...++.++|||||||++|
T Consensus       141 ~~~~-------~~~kl~Dfg~~~~~~~~~~~----------~~~~~~t~~y~aPE~~~~---~~~~~~~~DiwslG~il~  200 (317)
T 2pmi_A          141 INKR-------GQLKLGDFGLARAFGIPVNT----------FSSEVVTLWYRAPDVLMG---SRTYSTSIDIWSCGCILA  200 (317)
T ss_dssp             ECTT-------CCEEECCCSSCEETTSCCCC----------CCCCCSCCTTCCHHHHTT---CCCCCTHHHHHHHHHHHH
T ss_pred             EcCC-------CCEEECcCccceecCCCccc----------CCCCcccccccCchHhhC---CCCCCcHHHHHHHHHHHH
Confidence            9877       45999999999866432111          123468999999999975   245789999999999999


Q ss_pred             HHHhCCCCCCCCCHHHHHHHHHcCCCC---CcchHHhhhccCccccccccCC-CC---CCchhhhhhHHHHHHHHHHhcc
Q 003185          740 ELLTLQVPYMGLSELEIHDLIQMGKRP---RLTDELEALGSCHEHEVAQSGS-GF---EKPEAELETLSFLVDVFRRCTE  812 (840)
Q Consensus       740 ELLTG~~PF~~~~~~el~~~I~~~~~p---~l~~~l~~~~~~~~~~~~~~~~-~~---~~~~~~~~~s~~L~dLI~rCL~  812 (840)
                      ||++|+.||.+.+..+....+......   .....+......... +..... ..   ..+......+..+.+||.+||+
T Consensus       201 el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~  279 (317)
T 2pmi_A          201 EMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTKLPKYNPN-IQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQ  279 (317)
T ss_dssp             HHHHSSCSCCCSSHHHHHHHHHHHHCSCCTTTCGGGGGCTTCCTT-CCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSC
T ss_pred             HHHhCCCCCCCCChHHHHHHHHHHhCCCChhHhhhhhhhhhcccc-cccccchhHHHhhcccccccCCHHHHHHHHHHCC
Confidence            999999999998887777666543111   111111110000000 000000 00   0000111345689999999999


Q ss_pred             cCCCCCCCHHHHHHHHHh
Q 003185          813 ENPTERPTAGDLYEMFVA  830 (840)
Q Consensus       813 ~DP~eRPSa~ELLehLe~  830 (840)
                      .||.+|||+.|+++|.+-
T Consensus       280 ~dP~~Rpt~~e~l~hp~f  297 (317)
T 2pmi_A          280 LNPDMRLSAKQALHHPWF  297 (317)
T ss_dssp             SSGGGSCCHHHHTTSGGG
T ss_pred             CCcccCCCHHHHhCChhh
Confidence            999999999999998543


No 69 
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00  E-value=5.7e-41  Score=354.38  Aligned_cols=256  Identities=24%  Similarity=0.291  Sum_probs=209.0

Q ss_pred             CCCCCceeeeeecccCceEEEEEEE--CCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeEEec
Q 003185          502 GSFPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKIS  579 (840)
Q Consensus       502 ~~~~~y~i~~~LG~G~fG~Vy~a~~--~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~l~g~~~~  579 (840)
                      ..+++|++.+.||+|+||.||+|.+  .+..+|+|++....     .........+.+|+.++++++||||+++++++..
T Consensus         6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-----~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~   80 (279)
T 3fdn_A            6 WALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQ-----LEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHD   80 (279)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHH-----HHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEEC
T ss_pred             eecccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccc-----cchhhHHHHHHHHHHHHHcCCCCCCcchhheEec
Confidence            4678999999999999999999998  45579999875321     1122234456899999999999999999999986


Q ss_pred             CCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCCCcEE
Q 003185          580 SKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENIL  659 (840)
Q Consensus       580 ~~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKPeNIL  659 (840)
                      ..              ..++||||+++++|.+++..     ...+++..++.++.||+.||.|||++||+||||||+|||
T Consensus        81 ~~--------------~~~lv~e~~~~~~l~~~l~~-----~~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~dlkp~Nil  141 (279)
T 3fdn_A           81 AT--------------RVYLILEYAPLGTVYRELQK-----LSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLL  141 (279)
T ss_dssp             SS--------------EEEEEECCCTTEEHHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHTTTCEECCCCGGGEE
T ss_pred             CC--------------EEEEEEecCCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHhCCEecccCChHhEE
Confidence            55              35999999999999999986     246899999999999999999999999999999999999


Q ss_pred             EecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHHHHHH
Q 003185          660 IDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLL  739 (840)
Q Consensus       660 Ld~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLGvIL~  739 (840)
                      ++.+       +.+||+|||++.......            .....||+.|+|||++.+    ..++.++||||||+++|
T Consensus       142 i~~~-------~~~~l~Dfg~~~~~~~~~------------~~~~~~~~~y~aPE~~~~----~~~~~~~Di~slG~il~  198 (279)
T 3fdn_A          142 LGSA-------GELKIADFGWSVHAPSSR------------RTDLCGTLDYLPPEMIEG----RMHDEKVDLWSLGVLCY  198 (279)
T ss_dssp             ECTT-------SCEEECSCCEESCC--------------------CCCCTTCCHHHHTT----CCCCTTHHHHHHHHHHH
T ss_pred             EcCC-------CCEEEEeccccccCCccc------------ccccCCCCCccCHhHhcc----CCCCccchhHhHHHHHH
Confidence            9877       459999999986543321            123468999999999976    66789999999999999


Q ss_pred             HHHhCCCCCCCCCHHHHHHHHHcCCCCCcchHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC
Q 003185          740 ELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP  819 (840)
Q Consensus       740 ELLTG~~PF~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L~dLI~rCL~~DP~eRP  819 (840)
                      +|++|..||...+..+....+...... ++.                           ..+..+.+||.+||..||.+||
T Consensus       199 ~l~~g~~p~~~~~~~~~~~~~~~~~~~-~~~---------------------------~~~~~~~~li~~~l~~~p~~Rp  250 (279)
T 3fdn_A          199 EFLVGKPPFEANTYQETYKRISRVEFT-FPD---------------------------FVTEGARDLISRLLKHNPSQRP  250 (279)
T ss_dssp             HHHHSSCTTCCSSHHHHHHHHHHTCCC-CCT---------------------------TSCHHHHHHHHHHCCSSGGGSC
T ss_pred             HHHHCCCCCCCCcHHHHHHHHHhCCCC-CCC---------------------------cCCHHHHHHHHHHhccChhhCC
Confidence            999999999988888877777654321 111                           1245789999999999999999


Q ss_pred             CHHHHHHHHHhhc
Q 003185          820 TAGDLYEMFVART  832 (840)
Q Consensus       820 Sa~ELLehLe~l~  832 (840)
                      |+.+|++|.+-..
T Consensus       251 s~~e~l~h~~~~~  263 (279)
T 3fdn_A          251 MLREVLEHPWITA  263 (279)
T ss_dssp             CHHHHHHCHHHHH
T ss_pred             CHHHHhhCccccC
Confidence            9999999976444


No 70 
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00  E-value=7.7e-41  Score=354.29  Aligned_cols=265  Identities=21%  Similarity=0.314  Sum_probs=207.9

Q ss_pred             CCCCCceeeeeecccCceEEEEEEE--CCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeEEec
Q 003185          502 GSFPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKIS  579 (840)
Q Consensus       502 ~~~~~y~i~~~LG~G~fG~Vy~a~~--~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~l~g~~~~  579 (840)
                      ...++|++.+.||+|+||.||+|.+  .+..+|+|++............ ...+.+.+|+.++++++||||+++++++..
T Consensus        16 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~   94 (287)
T 4f0f_A           16 LADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMI-EKFQEFQREVFIMSNLNHPNIVKLYGLMHN   94 (287)
T ss_dssp             CCSTTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHH-CCSHHHHHHHHHHTTCCCTTBCCEEEEETT
T ss_pred             hhhccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHH-HHHHHHHHHHHHHHhCCCCCchhhheeecC
Confidence            5568999999999999999999998  6788999987554333222221 112455899999999999999999999864


Q ss_pred             CCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCC--eecccCCCCc
Q 003185          580 SKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKH--IMHRDIKSEN  657 (840)
Q Consensus       580 ~~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~g--IVHRDLKPeN  657 (840)
                      ..                ++||||+++++|.+++..    ....+++..++.++.||+.||.|||++|  |+||||||+|
T Consensus        95 ~~----------------~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~ivH~dikp~N  154 (287)
T 4f0f_A           95 PP----------------RMVMEFVPCGDLYHRLLD----KAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPN  154 (287)
T ss_dssp             TT----------------EEEEECCTTCBHHHHHHC----TTSCCCHHHHHHHHHHHHHHHHHHHTSSSCCBCSCCSGGG
T ss_pred             CC----------------eEEEEecCCCCHHHHHhc----ccCCccHHHHHHHHHHHHHHHHHHHhCCCCeecCCCCcce
Confidence            32                799999999999998864    3357999999999999999999999999  9999999999


Q ss_pred             EEEecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHHHH
Q 003185          658 ILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCL  737 (840)
Q Consensus       658 ILLd~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLGvI  737 (840)
                      ||++.++.  .....+||+|||+++......             ....||+.|+|||++..  ....++.++|||||||+
T Consensus       155 il~~~~~~--~~~~~~kl~Dfg~~~~~~~~~-------------~~~~g~~~y~aPE~~~~--~~~~~~~~~Di~slG~~  217 (287)
T 4f0f_A          155 IFLQSLDE--NAPVCAKVADFGLSQQSVHSV-------------SGLLGNFQWMAPETIGA--EEESYTEKADTYSFAMI  217 (287)
T ss_dssp             EEESCCCT--TCSCCEEECCCTTCBCCSSCE-------------ECCCCCCTTSCGGGSSC--SSCEECHHHHHHHHHHH
T ss_pred             EEEeccCC--CCceeEEeCCCCccccccccc-------------cccCCCccccCchhhcc--CCCCcCchhhHHHHHHH
Confidence            99987632  233459999999997543311             22468999999999853  12457899999999999


Q ss_pred             HHHHHhCCCCCCCCCHHHH--HHHHHcC-CCCCcchHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccC
Q 003185          738 LLELLTLQVPYMGLSELEI--HDLIQMG-KRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEEN  814 (840)
Q Consensus       738 L~ELLTG~~PF~~~~~~el--~~~I~~~-~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L~dLI~rCL~~D  814 (840)
                      +|+|++|+.||........  ...+... ..+.++.                           ..++.+.+||.+||+.|
T Consensus       218 l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~l~~li~~~l~~d  270 (287)
T 4f0f_A          218 LYTILTGEGPFDEYSYGKIKFINMIREEGLRPTIPE---------------------------DCPPRLRNVIELCWSGD  270 (287)
T ss_dssp             HHHHHHSSCTTTTCCCCHHHHHHHHHHSCCCCCCCT---------------------------TSCHHHHHHHHHHTCSS
T ss_pred             HHHHHcCCCCCccccccHHHHHHHHhccCCCCCCCc---------------------------ccCHHHHHHHHHHhcCC
Confidence            9999999999976643332  3333332 2222221                           23557999999999999


Q ss_pred             CCCCCCHHHHHHHHHhh
Q 003185          815 PTERPTAGDLYEMFVAR  831 (840)
Q Consensus       815 P~eRPSa~ELLehLe~l  831 (840)
                      |.+|||+.+|++.|+.+
T Consensus       271 p~~Rps~~~ll~~L~~l  287 (287)
T 4f0f_A          271 PKKRPHFSYIVKELSEL  287 (287)
T ss_dssp             GGGSCCHHHHHHHHHTC
T ss_pred             hhhCcCHHHHHHHHHhC
Confidence            99999999999999864


No 71 
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00  E-value=6e-41  Score=369.10  Aligned_cols=258  Identities=22%  Similarity=0.357  Sum_probs=205.8

Q ss_pred             CCCCCCCCceeeeeecccCceEEEEEEE--CCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhC-CCCCcceeee
Q 003185          499 LDPGSFPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEMYG  575 (840)
Q Consensus       499 ~~p~~~~~y~i~~~LG~G~fG~Vy~a~~--~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L-~HpNIV~l~g  575 (840)
                      +++..+++|++.+.||+|+||.||+|++  .+..+|+|++..... ......+    .+.+|+.++.++ +||||+++++
T Consensus         3 ~~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~----~~~~E~~~l~~~~~hp~iv~l~~   77 (345)
T 3a8x_A            3 MDPLGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELV-NDDEDID----WVQTEKHVFEQASNHPFLVGLHS   77 (345)
T ss_dssp             CCCCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGS-CSHHHHH----HHHHHHHHHHHTTTCTTBCCEEE
T ss_pred             CCCCchhheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHh-cchHHHH----HHHHHHHHHHhcCCCCccCeEEE
Confidence            3456788999999999999999999998  478899999764432 2222333    348899999988 7999999999


Q ss_pred             EEecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCC
Q 003185          576 HKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKS  655 (840)
Q Consensus       576 ~~~~~~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKP  655 (840)
                      ++.....              .||||||++||+|..++..     ...+++..++.++.||+.||.|||++||+||||||
T Consensus        78 ~~~~~~~--------------~~lv~e~~~gg~L~~~l~~-----~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp  138 (345)
T 3a8x_A           78 CFQTESR--------------LFFVIEYVNGGDLMFHMQR-----QRKLPEEHARFYSAEISLALNYLHERGIIYRDLKL  138 (345)
T ss_dssp             EEECSSE--------------EEEEECCCCSCBHHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCG
T ss_pred             EEEeCCE--------------EEEEEeCCCCCcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCH
Confidence            9986553              5999999999999999976     24699999999999999999999999999999999


Q ss_pred             CcEEEecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHH
Q 003185          656 ENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYG  735 (840)
Q Consensus       656 eNILLd~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLG  735 (840)
                      +|||++.+       +.+||+|||+++.......          ......||+.|+|||++.+    ..++.++||||||
T Consensus       139 ~NIll~~~-------g~~kL~DFG~a~~~~~~~~----------~~~~~~gt~~y~aPE~~~~----~~~~~~~DiwslG  197 (345)
T 3a8x_A          139 DNVLLDSE-------GHIKLTDYGMCKEGLRPGD----------TTSTFCGTPNYIAPEILRG----EDYGFSVDWWALG  197 (345)
T ss_dssp             GGEEECTT-------SCEEECCGGGCBCSCCTTC----------CBCCCCSCGGGCCHHHHTT----CCBCTHHHHHHHH
T ss_pred             HHEEECCC-------CCEEEEeccccccccCCCC----------cccccCCCccccCccccCC----CCCChHHhHHHHH
Confidence            99999877       4699999999975432111          1233579999999999986    6689999999999


Q ss_pred             HHHHHHHhCCCCCCCC---------CHHHHHHHHHcCCCCCcchHHhhhccCccccccccCCCCCCchhhhhhHHHHHHH
Q 003185          736 CLLLELLTLQVPYMGL---------SELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDV  806 (840)
Q Consensus       736 vIL~ELLTG~~PF~~~---------~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L~dL  806 (840)
                      |+||||++|+.||...         ....+...+..... .++.                           ..+..+.+|
T Consensus       198 ~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~~-~~p~---------------------------~~s~~~~~l  249 (345)
T 3a8x_A          198 VLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI-RIPR---------------------------SLSVKAASV  249 (345)
T ss_dssp             HHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHCCC-CCCT---------------------------TSCHHHHHH
T ss_pred             HHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcCCC-CCCC---------------------------CCCHHHHHH
Confidence            9999999999999652         22233334433211 1111                           124578999


Q ss_pred             HHHhcccCCCCCCCH------HHHHHHHH
Q 003185          807 FRRCTEENPTERPTA------GDLYEMFV  829 (840)
Q Consensus       807 I~rCL~~DP~eRPSa------~ELLehLe  829 (840)
                      |.+||..||.+||++      ++|++|..
T Consensus       250 i~~lL~~dP~~R~~~~~~~~~~~i~~hp~  278 (345)
T 3a8x_A          250 LKSFLNKDPKERLGCHPQTGFADIQGHPF  278 (345)
T ss_dssp             HHHHTCSSTTTSTTCCTTTHHHHHHTSGG
T ss_pred             HHHHhcCCHhHCCCCCCcCCHHHHhcCCc
Confidence            999999999999995      89998854


No 72 
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00  E-value=2.9e-41  Score=361.01  Aligned_cols=270  Identities=24%  Similarity=0.343  Sum_probs=207.4

Q ss_pred             ceeeeeecccCceEEEEEEECCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeEEecCCCCCCC
Q 003185          507 LSSCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWLPSA  586 (840)
Q Consensus       507 y~i~~~LG~G~fG~Vy~a~~~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~l~g~~~~~~~~p~~  586 (840)
                      |...+.||+|+||.||+|.+++..+|+|++............    +.+.+|+.++++++||||+++++++......   
T Consensus        33 ~~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~~~----~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~---  105 (307)
T 2nru_A           33 SVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK----QQFDQEIKVMAKCQHENLVELLGFSSDGDDL---  105 (307)
T ss_dssp             TTTCCEEEECSSEEEEEEESSSCEEEEEEECCCTTSCTTTHH----HHHHHHHHHHHHCCCTTBCCEEEEECSSSSC---
T ss_pred             cccCCccccCCCeEEEEEEECCceEEEEEEecccCcchHHHH----HHHHHHHHHHHhcCCCCeEEEEEEEecCCce---
Confidence            556799999999999999999999999997543322222222    3458999999999999999999999866543   


Q ss_pred             CCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCCCcEEEeccccc
Q 003185          587 DGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLERKK  666 (840)
Q Consensus       587 ~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKPeNILLd~~~~~  666 (840)
                                 ++||||+++++|.+++...  .....+++..++.++.||+.||.|||++||+||||||+|||++.+   
T Consensus       106 -----------~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nili~~~---  169 (307)
T 2nru_A          106 -----------CLVYVYMPNGSLLDRLSCL--DGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEA---  169 (307)
T ss_dssp             -----------EEEEECCTTCBHHHHHHTG--GGCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTT---
T ss_pred             -----------EEEEEecCCCcHHHHHHhc--cCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEcCC---
Confidence                       9999999999999999752  223568999999999999999999999999999999999999876   


Q ss_pred             CCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHHHHHHHHHhCCC
Q 003185          667 ADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLTLQV  746 (840)
Q Consensus       667 ~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLGvIL~ELLTG~~  746 (840)
                          +.+||+|||++..........        ......||+.|+|||++.+     .++.++|||||||++|+|++|..
T Consensus       170 ----~~~kl~Dfg~~~~~~~~~~~~--------~~~~~~g~~~y~aPE~~~~-----~~~~~~Dv~slG~il~~l~~g~~  232 (307)
T 2nru_A          170 ----FTAKISDFGLARASEKFAQTV--------MTSRIVGTTAYMAPEALRG-----EITPKSDIYSFGVVLLEIITGLP  232 (307)
T ss_dssp             ----CCEEECCCTTCEECCSCSSCE--------ECSSCCSCGGGCCHHHHTT-----EECTHHHHHHHHHHHHHHHHCCC
T ss_pred             ----CcEEEeecccccccccccccc--------cccccCCCcCcCChHHhcC-----CCCccchhHHHHHHHHHHHHCCC
Confidence                469999999998654322110        1123469999999999874     46889999999999999999999


Q ss_pred             CCCCCCHHHH----HHHHHcCCCCCcchHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHH
Q 003185          747 PYMGLSELEI----HDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAG  822 (840)
Q Consensus       747 PF~~~~~~el----~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L~dLI~rCL~~DP~eRPSa~  822 (840)
                      ||......+.    ...+... ...+...+.            .    .........+..+.+|+.+||..||.+|||+.
T Consensus       233 p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~------------~----~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~  295 (307)
T 2nru_A          233 AVDEHREPQLLLDIKEEIEDE-EKTIEDYID------------K----KMNDADSTSVEAMYSVASQCLHEKKNKRPDIK  295 (307)
T ss_dssp             SBCTTBSSSBTTHHHHHHHTT-SCCHHHHSC------------S----SCSCCCHHHHHHHHHHHHHHTCSSTTTSCCHH
T ss_pred             CcccCcchHHHHHHHHHhhhh-hhhhhhhcc------------c----cccccchHHHHHHHHHHHHHcCCCcccCcCHH
Confidence            9976543322    2222211 111111110            0    01122344577899999999999999999999


Q ss_pred             HHHHHHHhhcC
Q 003185          823 DLYEMFVARTS  833 (840)
Q Consensus       823 ELLehLe~l~~  833 (840)
                      +|+++|+.+..
T Consensus       296 ~l~~~L~~l~~  306 (307)
T 2nru_A          296 KVQQLLQEMTA  306 (307)
T ss_dssp             HHHHHHHHHC-
T ss_pred             HHHHHHHHHhc
Confidence            99999999865


No 73 
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00  E-value=4.8e-41  Score=370.80  Aligned_cols=253  Identities=24%  Similarity=0.297  Sum_probs=212.2

Q ss_pred             CCCCCceeeeeecccCceEEEEEEE--CCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeEEec
Q 003185          502 GSFPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKIS  579 (840)
Q Consensus       502 ~~~~~y~i~~~LG~G~fG~Vy~a~~--~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~l~g~~~~  579 (840)
                      ..+++|++.+.||+|+||.||+|++  .+..+|+|+......     ........+.+|+.+|+.++||||+++++++..
T Consensus        38 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~-----~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~  112 (350)
T 1rdq_E           38 AQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKV-----VKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKD  112 (350)
T ss_dssp             CCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHH-----HHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEEC
T ss_pred             CCHHHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHh-----ccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEc
Confidence            5688999999999999999999998  578899999753211     111122345899999999999999999999986


Q ss_pred             CCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCCCcEE
Q 003185          580 SKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENIL  659 (840)
Q Consensus       580 ~~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKPeNIL  659 (840)
                      ..              ..||||||++||+|.+++..     ...+++..++.++.||+.||.|||++||+||||||+|||
T Consensus       113 ~~--------------~~~lv~e~~~gg~L~~~l~~-----~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIl  173 (350)
T 1rdq_E          113 NS--------------NLYMVMEYVAGGEMFSHLRR-----IGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLL  173 (350)
T ss_dssp             SS--------------EEEEEEECCTTCBHHHHHHH-----HCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEE
T ss_pred             CC--------------EEEEEEcCCCCCcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCccceEE
Confidence            55              35999999999999999986     246899999999999999999999999999999999999


Q ss_pred             EecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHHHHHH
Q 003185          660 IDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLL  739 (840)
Q Consensus       660 Ld~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLGvIL~  739 (840)
                      ++.+       +.+||+|||+++......             ....||+.|+|||++.+    ..++.++|||||||+||
T Consensus       174 l~~~-------g~~kL~DFg~a~~~~~~~-------------~~~~gt~~y~aPE~~~~----~~~~~~~DiwslG~il~  229 (350)
T 1rdq_E          174 IDQQ-------GYIQVTDFGFAKRVKGRT-------------WTLCGTPEALAPEIILS----KGYNKAVDWWALGVLIY  229 (350)
T ss_dssp             ECTT-------SCEEECCCTTCEECSSCB-------------CCCEECGGGCCHHHHTT----CCBCTHHHHHHHHHHHH
T ss_pred             ECCC-------CCEEEcccccceeccCCc-------------ccccCCccccCHHHhcC----CCCCCcCCEecccHhHh
Confidence            9877       469999999998654321             23469999999999986    56899999999999999


Q ss_pred             HHHhCCCCCCCCCHHHHHHHHHcCCCCCcchHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC
Q 003185          740 ELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP  819 (840)
Q Consensus       740 ELLTG~~PF~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L~dLI~rCL~~DP~eRP  819 (840)
                      ||++|..||.+.+..++...+..+.. .++.                           ..+..+.+||.+||+.||.+||
T Consensus       230 ell~g~~Pf~~~~~~~~~~~i~~~~~-~~p~---------------------------~~~~~~~~li~~lL~~dp~~R~  281 (350)
T 1rdq_E          230 EMAAGYPPFFADQPIQIYEKIVSGKV-RFPS---------------------------HFSSDLKDLLRNLLQVDLTKRF  281 (350)
T ss_dssp             HHHHSSCSSCCSSHHHHHHHHHHCCC-CCCT---------------------------TCCHHHHHHHHHHSCSCTTTCT
T ss_pred             HHhhCCCCCCCCCHHHHHHHHHcCCC-CCCC---------------------------CCCHHHHHHHHHHhhcCHHhcc
Confidence            99999999999988888888876632 1221                           1245789999999999999999


Q ss_pred             C-----HHHHHHHHHh
Q 003185          820 T-----AGDLYEMFVA  830 (840)
Q Consensus       820 S-----a~ELLehLe~  830 (840)
                      +     +++|++|..-
T Consensus       282 ~~~~~~~~ei~~h~~f  297 (350)
T 1rdq_E          282 GNLKNGVNDIKNHKWF  297 (350)
T ss_dssp             TSSTTTTHHHHTSGGG
T ss_pred             CCccCCHHHHHhCcCc
Confidence            8     9999998653


No 74 
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00  E-value=2.6e-41  Score=367.50  Aligned_cols=289  Identities=21%  Similarity=0.247  Sum_probs=206.4

Q ss_pred             CCCCCCceeeeeecccCceEEEEEEE--CCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeEEe
Q 003185          501 PGSFPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKI  578 (840)
Q Consensus       501 p~~~~~y~i~~~LG~G~fG~Vy~a~~--~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~l~g~~~  578 (840)
                      ...+++|++.+.||+|+||.||+|.+  .+..||+|++....  ......+    .+.+|+.++++++||||+++++++.
T Consensus        30 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~----~~~~E~~~l~~l~h~~iv~~~~~~~  103 (329)
T 3gbz_A           30 ATSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEH--EEEGVPG----TAIREVSLLKELQHRNIIELKSVIH  103 (329)
T ss_dssp             --CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------------CHHHHHHGGGCCCTTBCCEEEEEE
T ss_pred             ccchhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccc--cccccch----hHHHHHHHHHHcCCCCcceEEEEEe
Confidence            36788999999999999999999987  67889999864332  2222222    3389999999999999999999998


Q ss_pred             cCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCCCcE
Q 003185          579 SSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENI  658 (840)
Q Consensus       579 ~~~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKPeNI  658 (840)
                      ....              .+|||||++ |+|.+++..     ...+++..++.|+.||+.||.|||++||+||||||+||
T Consensus       104 ~~~~--------------~~lv~e~~~-~~L~~~~~~-----~~~~~~~~~~~i~~ql~~~l~~LH~~~ivH~Dlkp~NI  163 (329)
T 3gbz_A          104 HNHR--------------LHLIFEYAE-NDLKKYMDK-----NPDVSMRVIKSFLYQLINGVNFCHSRRCLHRDLKPQNL  163 (329)
T ss_dssp             ETTE--------------EEEEEECCS-EEHHHHHHH-----CTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGE
T ss_pred             cCCE--------------EEEEEecCC-CCHHHHHhh-----cCCCCHHHHHHHHHHHHHHHHHHHhCCEECCCCCHHHE
Confidence            6653              599999998 599999986     35699999999999999999999999999999999999


Q ss_pred             EEecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHHHHH
Q 003185          659 LIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLL  738 (840)
Q Consensus       659 LLd~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLGvIL  738 (840)
                      |++.++.  ...+.+||+|||+++........          .....||+.|+|||++.+   ...++.++|||||||++
T Consensus       164 ll~~~~~--~~~~~~kl~Dfg~a~~~~~~~~~----------~~~~~~t~~y~aPE~~~~---~~~~~~~~DiwslG~il  228 (329)
T 3gbz_A          164 LLSVSDA--SETPVLKIGDFGLARAFGIPIRQ----------FTHEIITLWYRPPEILLG---SRHYSTSVDIWSIACIW  228 (329)
T ss_dssp             EEEC-------CCEEEECCTTHHHHHC---------------------CCTTCCHHHHTT---CCCCCTHHHHHHHHHHH
T ss_pred             EEecCCC--CccceEEECcCCCccccCCcccc----------cCCCcCCccccCHHHhcC---CCCCCcHHHHHHHHHHH
Confidence            9975531  23467999999999866432111          123468999999999975   24579999999999999


Q ss_pred             HHHHhCCCCCCCCCHHHHHHHHHcCCCCCcchHHhhhccCccccccccCCCCC----CchhhhhhHHHHHHHHHHhcccC
Q 003185          739 LELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFE----KPEAELETLSFLVDVFRRCTEEN  814 (840)
Q Consensus       739 ~ELLTG~~PF~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~----~~~~~~~~s~~L~dLI~rCL~~D  814 (840)
                      |||++|..||.+....+....+...........+.......  .+........    ........++.+.+||.+||+.|
T Consensus       229 ~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  306 (329)
T 3gbz_A          229 AEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWPGVTALP--DWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMD  306 (329)
T ss_dssp             HHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSTTGGGST--TCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSS
T ss_pred             HHHHHCCCCcCCCCHHHHHHHHHHHhCCCchhhhhhhhhhh--hhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCC
Confidence            99999999999988777666665431111111111110000  0000000000    01111224578999999999999


Q ss_pred             CCCCCCHHHHHHHHHhhc
Q 003185          815 PTERPTAGDLYEMFVART  832 (840)
Q Consensus       815 P~eRPSa~ELLehLe~l~  832 (840)
                      |.+|||+.|+++|.+-..
T Consensus       307 P~~R~t~~e~l~hp~f~~  324 (329)
T 3gbz_A          307 PVKRISAKNALEHPYFSH  324 (329)
T ss_dssp             GGGSCCHHHHHTSGGGSS
T ss_pred             hhhCCCHHHHhCCcccCC
Confidence            999999999999866443


No 75 
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00  E-value=1.8e-41  Score=357.12  Aligned_cols=265  Identities=26%  Similarity=0.357  Sum_probs=213.8

Q ss_pred             CCCCCceeeeeecccCceEEEEEEE--CCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeEEec
Q 003185          502 GSFPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKIS  579 (840)
Q Consensus       502 ~~~~~y~i~~~LG~G~fG~Vy~a~~--~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~l~g~~~~  579 (840)
                      ..+++|++.+.||+|+||.||+|.+  .+..+|+|++....  ......+    .+.+|+.++++++||||+++++++..
T Consensus         3 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~----~~~~e~~~l~~l~h~~i~~~~~~~~~   76 (279)
T 2w5a_A            3 SRAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGS--MTEAEKQ----MLVSEVNLLRELKHPNIVRYYDRIID   76 (279)
T ss_dssp             CCGGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTT--CCHHHHH----HHHHHHHHHHHCCCTTBCCEEEEEEE
T ss_pred             CchhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEccc--CCHHHHH----HHHHHHHHHHhcCCCCCCeEEEEEec
Confidence            4567999999999999999999998  57789999875432  2333333    44899999999999999999998864


Q ss_pred             CCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCC-----eecccCC
Q 003185          580 SKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKH-----IMHRDIK  654 (840)
Q Consensus       580 ~~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~g-----IVHRDLK  654 (840)
                      ..            ....++||||+++++|.+++..... ....+++..++.++.||+.||.|||++|     |+|||||
T Consensus        77 ~~------------~~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~  143 (279)
T 2w5a_A           77 RT------------NTTLYIVMEYCEGGDLASVITKGTK-ERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLK  143 (279)
T ss_dssp             GG------------GTEEEEEEECCTTEEHHHHHHHHHH-TTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCS
T ss_pred             CC------------CceEEEEEeCCCCCCHHHHHHhhcc-cCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccc
Confidence            32            1246999999999999999986322 2345899999999999999999999999     9999999


Q ss_pred             CCcEEEecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHH
Q 003185          655 SENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSY  734 (840)
Q Consensus       655 PeNILLd~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSL  734 (840)
                      |+|||++.+       +.+||+|||++.........          .....||+.|+|||++.+    ..++.++|||||
T Consensus       144 p~NIl~~~~-------~~~kl~dfg~~~~~~~~~~~----------~~~~~~~~~y~aPE~~~~----~~~~~~~Di~sl  202 (279)
T 2w5a_A          144 PANVFLDGK-------QNVKLGDFGLARILNHDTSF----------AKTFVGTPYYMSPEQMNR----MSYNEKSDIWSL  202 (279)
T ss_dssp             GGGEEECSS-------SCEEECCCCHHHHC---CHH----------HHHHHSCCTTCCHHHHHC----C-CCHHHHHHHH
T ss_pred             hhhEEEcCC-------CCEEEecCchheeecccccc----------ccccCCCccccChHHhcc----CCCCchhhHHHH
Confidence            999999877       46999999999765432211          012358999999999986    568899999999


Q ss_pred             HHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCcchHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccC
Q 003185          735 GCLLLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEEN  814 (840)
Q Consensus       735 GvIL~ELLTG~~PF~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L~dLI~rCL~~D  814 (840)
                      |+++|+|++|..||...+..++...+..+..+.++.                           ..+..+.+||.+||..|
T Consensus       203 G~il~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~~---------------------------~~~~~l~~li~~~l~~~  255 (279)
T 2w5a_A          203 GCLLYELCALMPPFTAFSQKELAGKIREGKFRRIPY---------------------------RYSDELNEIITRMLNLK  255 (279)
T ss_dssp             HHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCCT---------------------------TSCHHHHHHHHHHTCSS
T ss_pred             HHHHHHHHHCCCCCcccCHHHHHHHHhhcccccCCc---------------------------ccCHHHHHHHHHHcCCC
Confidence            999999999999999988888888887765544332                           12457899999999999


Q ss_pred             CCCCCCHHHHHHHHHhhcC
Q 003185          815 PTERPTAGDLYEMFVARTS  833 (840)
Q Consensus       815 P~eRPSa~ELLehLe~l~~  833 (840)
                      |.+|||+.+|+++++....
T Consensus       256 p~~Rps~~~ll~~~~~~~~  274 (279)
T 2w5a_A          256 DYHRPSVEEILENPLILEH  274 (279)
T ss_dssp             GGGSCCHHHHHTSTTCCGG
T ss_pred             cccCCCHHHHHhChhhhhh
Confidence            9999999999999876543


No 76 
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00  E-value=3.8e-41  Score=362.51  Aligned_cols=268  Identities=23%  Similarity=0.277  Sum_probs=203.8

Q ss_pred             CCCCCceeeeeecccCceEEEEEEE--CCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeEEec
Q 003185          502 GSFPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKIS  579 (840)
Q Consensus       502 ~~~~~y~i~~~LG~G~fG~Vy~a~~--~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~l~g~~~~  579 (840)
                      ...++|++.+.||+|+||.||+|.+  .+..||+|++..... ....    ....+.+|+.++++++||||+++++++..
T Consensus         9 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~----~~~~~~~E~~~l~~l~hp~iv~~~~~~~~   83 (311)
T 3ork_A            9 HLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLA-RDPS----FYLRFRREAQNAAALNHPAIVAVYDTGEA   83 (311)
T ss_dssp             EETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTT-TSHH----HHHHHHHHHTTCCCCCCTTBCCEEEEEEE
T ss_pred             eecCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCcccc-CCHH----HHHHHHHHHHHHHcCCCCCcceEEEeeec
Confidence            3457899999999999999999996  678999999754322 1222    23345899999999999999999999875


Q ss_pred             CCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCCCcEE
Q 003185          580 SKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENIL  659 (840)
Q Consensus       580 ~~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKPeNIL  659 (840)
                      ....          ....||||||++|++|.+++..     ...+++..++.++.||+.||.|||++||+||||||+|||
T Consensus        84 ~~~~----------~~~~~lv~e~~~g~~L~~~l~~-----~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil  148 (311)
T 3ork_A           84 ETPA----------GPLPYIVMEYVDGVTLRDIVHT-----EGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIM  148 (311)
T ss_dssp             EETT----------EEEEEEEEECCCEEEHHHHHHH-----HCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEE
T ss_pred             cCCC----------CcccEEEEecCCCCCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEE
Confidence            5421          2245999999999999999976     246899999999999999999999999999999999999


Q ss_pred             EecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHHHHHH
Q 003185          660 IDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLL  739 (840)
Q Consensus       660 Ld~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLGvIL~  739 (840)
                      ++.+       +.+||+|||++..+......       ........||+.|+|||++.+    ..++.++|||||||++|
T Consensus       149 ~~~~-------~~~kl~Dfg~a~~~~~~~~~-------~~~~~~~~gt~~y~aPE~~~~----~~~~~~~Di~slG~~l~  210 (311)
T 3ork_A          149 ISAT-------NAVKVMDFGIARAIADSGNS-------VTQTAAVIGTAQYLSPEQARG----DSVDARSDVYSLGCVLY  210 (311)
T ss_dssp             EETT-------SCEEECCCSCC-------------------------CCTTCCHHHHHT----CCCCHHHHHHHHHHHHH
T ss_pred             EcCC-------CCEEEeeccCcccccccccc-------cccccccCcCcccCCHHHhcC----CCCCchHhHHHHHHHHH
Confidence            9877       45999999999866442211       011233569999999999986    67899999999999999


Q ss_pred             HHHhCCCCCCCCCHHHHHHHHHcCCCCCcchHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC
Q 003185          740 ELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP  819 (840)
Q Consensus       740 ELLTG~~PF~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L~dLI~rCL~~DP~eRP  819 (840)
                      +|++|+.||.+....+....+..........                        .....+..+.+||.+||+.||.+||
T Consensus       211 ~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~~l~~li~~~l~~dP~~R~  266 (311)
T 3ork_A          211 EVLTGEPPFTGDSPVSVAYQHVREDPIPPSA------------------------RHEGLSADLDAVVLKALAKNPENRY  266 (311)
T ss_dssp             HHHHSSCSCCCSSHHHHHHHHHHCCCCCHHH------------------------HSTTCCHHHHHHHHHHTCSSGGGSC
T ss_pred             HHHhCCCCCCCCChHHHHHHHhcCCCCCccc------------------------ccCCCCHHHHHHHHHHHhcCHhhCh
Confidence            9999999999988877766655543221111                        0112356799999999999999999


Q ss_pred             CHHHHHHH-HHhh
Q 003185          820 TAGDLYEM-FVAR  831 (840)
Q Consensus       820 Sa~ELLeh-Le~l  831 (840)
                      ++.+++.+ |...
T Consensus       267 ~~~~~l~~~l~~~  279 (311)
T 3ork_A          267 QTAAEMRADLVRV  279 (311)
T ss_dssp             SSHHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHH
Confidence            77666655 4444


No 77 
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00  E-value=4.2e-41  Score=383.10  Aligned_cols=261  Identities=21%  Similarity=0.347  Sum_probs=215.0

Q ss_pred             CCCCCceeeeeecccCceEEEEEEEC-CeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeEEecC
Q 003185          502 GSFPSLSSCDEAGKSVSSSLFRCKFG-SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISS  580 (840)
Q Consensus       502 ~~~~~y~i~~~LG~G~fG~Vy~a~~~-~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~l~g~~~~~  580 (840)
                      +..++|.+.+.||+|+||.||+|.+. +..||||+.....     ...+    .+.+|+.+|++|+|||||++++++.. 
T Consensus       185 i~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~-----~~~~----~~~~E~~~l~~l~h~~iv~l~~~~~~-  254 (454)
T 1qcf_A          185 IPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-----MSVE----AFLAEANVMKTLQHDKLVKLHAVVTK-  254 (454)
T ss_dssp             CCGGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTS-----BCHH----HHHHHHHHHTTCCCTTBCCEEEEECS-
T ss_pred             echHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCC-----ccHH----HHHHHHHHHhhCCCCCEeeEEEEEeC-
Confidence            45578999999999999999999984 6789999865321     1123    34899999999999999999999862 


Q ss_pred             CCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCCCcEEE
Q 003185          581 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILI  660 (840)
Q Consensus       581 ~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKPeNILL  660 (840)
                      ..              .+|||||+.+|+|.+++...   ....+++..++.++.||+.||.|||++||+||||||+||||
T Consensus       255 ~~--------------~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill  317 (454)
T 1qcf_A          255 EP--------------IYIITEFMAKGSLLDFLKSD---EGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILV  317 (454)
T ss_dssp             SS--------------CEEEECCCTTCBHHHHHHSH---HHHTCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEE
T ss_pred             Cc--------------cEEEEeecCCCcHHHHHHhc---cCCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEEE
Confidence            22              39999999999999999742   12357899999999999999999999999999999999999


Q ss_pred             ecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHHHHHHH
Q 003185          661 DLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLE  740 (840)
Q Consensus       661 d~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLGvIL~E  740 (840)
                      +.+       +.+||+|||+++.........         .....+|+.|+|||++..    ..++.++|||||||+|||
T Consensus       318 ~~~-------~~~kl~DFG~a~~~~~~~~~~---------~~~~~~~~~y~aPE~~~~----~~~~~~~DvwslG~~l~e  377 (454)
T 1qcf_A          318 SAS-------LVCKIADFGLARVIEDNEYTA---------REGAKFPIKWTAPEAINF----GSFTIKSDVWSFGILLME  377 (454)
T ss_dssp             CTT-------CCEEECSTTGGGGBCCHHHHT---------TCSSSSCGGGSCHHHHHH----CCCCHHHHHHHHHHHHHH
T ss_pred             CCC-------CcEEEeeCCCceEcCCCceec---------cCCCcccccccCHHHhcc----CCCCcHHHHHhHHHHHHH
Confidence            877       569999999998764322110         122346889999999986    678999999999999999


Q ss_pred             HHh-CCCCCCCCCHHHHHHHHHcCCCCCcchHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC
Q 003185          741 LLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP  819 (840)
Q Consensus       741 LLT-G~~PF~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L~dLI~rCL~~DP~eRP  819 (840)
                      |+| |+.||.+.+..++...+..+.+...+.                           .+++.+.+||.+||..||.+||
T Consensus       378 l~t~g~~P~~~~~~~~~~~~i~~~~~~~~~~---------------------------~~~~~l~~li~~cl~~dp~~RP  430 (454)
T 1qcf_A          378 IVTYGRIPYPGMSNPEVIRALERGYRMPRPE---------------------------NCPEELYNIMMRCWKNRPEERP  430 (454)
T ss_dssp             HHTTSCCSSTTCCHHHHHHHHHHTCCCCCCT---------------------------TSCHHHHHHHHHHTCSSGGGSC
T ss_pred             HHhCCCCCCCCCCHHHHHHHHHcCCCCCCCC---------------------------CCCHHHHHHHHHHccCChhHCc
Confidence            999 999999999888888887765433321                           1345799999999999999999


Q ss_pred             CHHHHHHHHHhhcCCCC
Q 003185          820 TAGDLYEMFVARTSSSI  836 (840)
Q Consensus       820 Sa~ELLehLe~l~~~~~  836 (840)
                      |+.+|++.|+.+.....
T Consensus       431 t~~~i~~~L~~~~~~~~  447 (454)
T 1qcf_A          431 TFEYIQSVLDDFYTATE  447 (454)
T ss_dssp             CHHHHHHHHHTSSSSSC
T ss_pred             CHHHHHHHHHHHHhccc
Confidence            99999999999876543


No 78 
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00  E-value=5.4e-41  Score=354.90  Aligned_cols=259  Identities=20%  Similarity=0.319  Sum_probs=207.4

Q ss_pred             CCCCCceeeeeecccCceEEEEEEECC-----eeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeE
Q 003185          502 GSFPSLSSCDEAGKSVSSSLFRCKFGS-----ADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGH  576 (840)
Q Consensus       502 ~~~~~y~i~~~LG~G~fG~Vy~a~~~~-----~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~l~g~  576 (840)
                      ...++|.+.+.||+|+||.||+|.+..     ..+|+|+....   ......+    .+.+|+.++++++||||++++++
T Consensus         9 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~---~~~~~~~----~~~~E~~~l~~l~h~~i~~~~~~   81 (281)
T 3cc6_A            9 IAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKD---CTLDNKE----KFMSEAVIMKNLDHPHIVKLIGI   81 (281)
T ss_dssp             CCGGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTT---SCHHHHH----HHHHHHHHHHHHCCTTBCCEEEE
T ss_pred             ecccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccc---cCchHHH----HHHHHHHHHHhCCCCCcceEEEE
Confidence            566899999999999999999998632     24788875422   1222333    44899999999999999999999


Q ss_pred             EecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCCC
Q 003185          577 KISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSE  656 (840)
Q Consensus       577 ~~~~~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKPe  656 (840)
                      +....               .++||||+++++|.+++...    ...+++..++.++.||+.||.|||++||+||||||+
T Consensus        82 ~~~~~---------------~~~v~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~  142 (281)
T 3cc6_A           82 IEEEP---------------TWIIMELYPYGELGHYLERN----KNSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVR  142 (281)
T ss_dssp             ECSSS---------------CEEEEECCTTCBHHHHHHHH----TTTCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGG
T ss_pred             EcCCC---------------CEEEEecCCCCCHHHHHHhc----cccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccc
Confidence            76432               38999999999999999762    345899999999999999999999999999999999


Q ss_pred             cEEEecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHHH
Q 003185          657 NILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGC  736 (840)
Q Consensus       657 NILLd~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLGv  736 (840)
                      |||++.+       +.+||+|||++.........         ......+|+.|+|||++.+    ..++.++|||||||
T Consensus       143 Nil~~~~-------~~~kl~Dfg~~~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~----~~~~~~~Di~slG~  202 (281)
T 3cc6_A          143 NILVASP-------ECVKLGDFGLSRYIEDEDYY---------KASVTRLPIKWMSPESINF----RRFTTASDVWMFAV  202 (281)
T ss_dssp             GEEEEET-------TEEEECCCCGGGCC------------------CCCCCGGGCCHHHHHH----CCCCHHHHHHHHHH
T ss_pred             eEEECCC-------CcEEeCccCCCccccccccc---------ccccCCCCcceeCchhhcc----CCCCchhccHHHHH
Confidence            9999877       46999999999866442211         1122357889999999986    67899999999999


Q ss_pred             HHHHHHh-CCCCCCCCCHHHHHHHHHcCCCCCcchHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCC
Q 003185          737 LLLELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENP  815 (840)
Q Consensus       737 IL~ELLT-G~~PF~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L~dLI~rCL~~DP  815 (840)
                      ++|+|++ |+.||......+....+.....+..+.                           ..++.+.+||.+||..||
T Consensus       203 il~~llt~g~~p~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~l~~li~~~l~~~p  255 (281)
T 3cc6_A          203 CMWEILSFGKQPFFWLENKDVIGVLEKGDRLPKPD---------------------------LCPPVLYTLMTRCWDYDP  255 (281)
T ss_dssp             HHHHHHTTTCCTTTTSCGGGHHHHHHHTCCCCCCT---------------------------TCCHHHHHHHHHHTCSSG
T ss_pred             HHHHHHhCCCCCcccCChHHHHHHHhcCCCCCCCC---------------------------CCCHHHHHHHHHHccCCc
Confidence            9999998 999998877777776666654333221                           124578999999999999


Q ss_pred             CCCCCHHHHHHHHHhhcC
Q 003185          816 TERPTAGDLYEMFVARTS  833 (840)
Q Consensus       816 ~eRPSa~ELLehLe~l~~  833 (840)
                      .+|||+.+++++|+.+.+
T Consensus       256 ~~Rps~~ell~~L~~~~~  273 (281)
T 3cc6_A          256 SDRPRFTELVCSLSDVYQ  273 (281)
T ss_dssp             GGSCCHHHHHHHHHHHHH
T ss_pred             hhCcCHHHHHHHHHHHHH
Confidence            999999999999998753


No 79 
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00  E-value=1.3e-40  Score=357.38  Aligned_cols=269  Identities=21%  Similarity=0.290  Sum_probs=202.7

Q ss_pred             CCCCceeeeeecccCceEEEEEEE--CCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeEEecC
Q 003185          503 SFPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISS  580 (840)
Q Consensus       503 ~~~~y~i~~~LG~G~fG~Vy~a~~--~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~l~g~~~~~  580 (840)
                      ..++|.+.+.||+|+||.||+|.+  .+..+|+|+...    ......+.    +.+|+.++++++||||+++++++...
T Consensus         8 ~~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~----~~~~~~~~----~~~E~~~l~~l~hp~iv~~~~~~~~~   79 (310)
T 3s95_A            8 RPSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIR----FDEETQRT----FLKEVKVMRCLEHPNVLKFIGVLYKD   79 (310)
T ss_dssp             CGGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESC----CCHHHHHH----HHHHHHHHTTCCCTTBCCEEEEEEET
T ss_pred             ChhHeeccceecCCCCEEEEEEEECCCCcEEEEEEecc----CCHHHHHH----HHHHHHHHHhCCCcCcccEEEEEecC
Confidence            457899999999999999999998  477889887532    22333333    48999999999999999999999866


Q ss_pred             CCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCCCcEEE
Q 003185          581 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILI  660 (840)
Q Consensus       581 ~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKPeNILL  660 (840)
                      ..              .++||||+++++|.+++..    ....+++..++.++.||+.||+|||++||+||||||+|||+
T Consensus        80 ~~--------------~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nil~  141 (310)
T 3s95_A           80 KR--------------LNFITEYIKGGTLRGIIKS----MDSQYPWSQRVSFAKDIASGMAYLHSMNIIHRDLNSHNCLV  141 (310)
T ss_dssp             TE--------------EEEEEECCTTCBHHHHHHH----CCTTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEE
T ss_pred             Ce--------------eEEEEEecCCCcHHHHHHh----ccCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCcCeEEE
Confidence            53              5999999999999999986    24569999999999999999999999999999999999999


Q ss_pred             ecccccCCCCCeEEEeecCCccccccccccccc----ccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHHH
Q 003185          661 DLERKKADGKPVVKLCDFDRAVPLRSFLHTCCI----AHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGC  736 (840)
Q Consensus       661 d~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~----~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLGv  736 (840)
                      +.+       +.+||+|||+++...........    ............||+.|+|||++.+    ..++.++|||||||
T Consensus       142 ~~~-------~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~~Di~slG~  210 (310)
T 3s95_A          142 REN-------KNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMING----RSYDEKVDVFSFGI  210 (310)
T ss_dssp             CTT-------SCEEECCCTTCEECC--------------------CCCCSCGGGCCHHHHTT----CCCCTHHHHHHHHH
T ss_pred             CCC-------CCEEEeecccceecccccccccccccccccccccccccCCCcceeCHHHhcC----CCCCcHHHHHHHHH
Confidence            877       45999999999876543221100    0000011124579999999999986    67899999999999


Q ss_pred             HHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCcchHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCC
Q 003185          737 LLLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPT  816 (840)
Q Consensus       737 IL~ELLTG~~PF~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L~dLI~rCL~~DP~  816 (840)
                      ++|||++|..||.........      ............                   ....+++.+.+||.+||+.||.
T Consensus       211 ~l~el~~g~~~~~~~~~~~~~------~~~~~~~~~~~~-------------------~~~~~~~~l~~li~~~l~~dP~  265 (310)
T 3s95_A          211 VLCEIIGRVNADPDYLPRTMD------FGLNVRGFLDRY-------------------CPPNCPPSFFPITVRCCDLDPE  265 (310)
T ss_dssp             HHHHHHHTCCSSTTTSCBCTT------SSBCHHHHHHHT-------------------CCTTCCTTHHHHHHHHTCSSGG
T ss_pred             HHHHHhcCCCCCcchhhhHHH------Hhhhhhcccccc-------------------CCCCCCHHHHHHHHHHccCChh
Confidence            999999999998654221100      000000000000                   0011234689999999999999


Q ss_pred             CCCCHHHHHHHHHhhcC
Q 003185          817 ERPTAGDLYEMFVARTS  833 (840)
Q Consensus       817 eRPSa~ELLehLe~l~~  833 (840)
                      +|||+.+|++.|+.+..
T Consensus       266 ~Rps~~~l~~~L~~l~~  282 (310)
T 3s95_A          266 KRPSFVKLEHWLETLRM  282 (310)
T ss_dssp             GSCCHHHHHHHHHHHHH
T ss_pred             hCcCHHHHHHHHHHHHH
Confidence            99999999999988753


No 80 
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00  E-value=2e-41  Score=368.53  Aligned_cols=260  Identities=24%  Similarity=0.286  Sum_probs=203.7

Q ss_pred             CCCCCceeeeeecccCceEEEEEEE--CCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeEEec
Q 003185          502 GSFPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKIS  579 (840)
Q Consensus       502 ~~~~~y~i~~~LG~G~fG~Vy~a~~--~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~l~g~~~~  579 (840)
                      ..+++|++.+.||+|+||.||+|.+  .+..||+|++..+...   ..    .+.+.+|+.+++.++||||+++++++..
T Consensus         4 ~~~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---~~----~~~~~~E~~~l~~l~hpnIv~~~~~~~~   76 (323)
T 3tki_A            4 PFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV---DC----PENIKKEICINKMLNHENVVKFYGHRRE   76 (323)
T ss_dssp             TTTTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC--------------CHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred             cHhhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEccccc---ch----HHHHHHHHHHHHhCCCCCCCeEEEEEec
Confidence            4578999999999999999999987  5788999997644321   11    1234899999999999999999999986


Q ss_pred             CCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCCCcEE
Q 003185          580 SKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENIL  659 (840)
Q Consensus       580 ~~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKPeNIL  659 (840)
                      ...              .||||||+++++|.+++..     ...+++..++.++.||+.||.|||++||+||||||+|||
T Consensus        77 ~~~--------------~~lv~e~~~~~~L~~~l~~-----~~~~~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIl  137 (323)
T 3tki_A           77 GNI--------------QYLFLEYCSGGELFDRIEP-----DIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLL  137 (323)
T ss_dssp             SSE--------------EEEEEECCTTEEGGGGSBT-----TTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEE
T ss_pred             CCe--------------EEEEEEcCCCCcHHHHHhh-----cCCCCHHHHHHHHHHHHHHHHHHHHCCccccccchHHEE
Confidence            553              4999999999999998864     356999999999999999999999999999999999999


Q ss_pred             EecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHHHHHH
Q 003185          660 IDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLL  739 (840)
Q Consensus       660 Ld~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLGvIL~  739 (840)
                      ++.+       +.+||+|||++..+.......        ......||+.|+|||++.+   ...++.++|||||||+||
T Consensus       138 l~~~-------~~~kl~Dfg~a~~~~~~~~~~--------~~~~~~gt~~y~aPE~~~~---~~~~~~~~DiwslG~il~  199 (323)
T 3tki_A          138 LDER-------DNLKISDFGLATVFRYNNRER--------LLNKMCGTLPYVAPELLKR---REFHAEPVDVWSCGIVLT  199 (323)
T ss_dssp             ECTT-------CCEEECCCTTCEECEETTEEC--------CBCSCCSCGGGSCHHHHHC---SSBCHHHHHHHHHHHHHH
T ss_pred             EeCC-------CCEEEEEeeccceeccCCccc--------ccCCCccCcCccCcHHhcc---CCCCCCcccHHHHHHHHH
Confidence            9877       459999999998664322110        1123569999999999976   233478999999999999


Q ss_pred             HHHhCCCCCCCCCHH-HHHHHHHcCCCCCcchHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCC
Q 003185          740 ELLTLQVPYMGLSEL-EIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTER  818 (840)
Q Consensus       740 ELLTG~~PF~~~~~~-el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L~dLI~rCL~~DP~eR  818 (840)
                      +|++|+.||...... .....+..... ...                         .....+..+.+||.+||..||.+|
T Consensus       200 ~ll~g~~pf~~~~~~~~~~~~~~~~~~-~~~-------------------------~~~~~~~~~~~li~~~L~~dP~~R  253 (323)
T 3tki_A          200 AMLAGELPWDQPSDSCQEYSDWKEKKT-YLN-------------------------PWKKIDSAPLALLHKILVENPSAR  253 (323)
T ss_dssp             HHHHSSCSCSSSCTTSHHHHHHHTTCT-TST-------------------------TGGGSCHHHHHHHHHHSCSSTTTS
T ss_pred             HHHhCCCCCCCCchHHHHHHHHhcccc-cCC-------------------------ccccCCHHHHHHHHHHccCChhhC
Confidence            999999999766543 22222222211 000                         112235678999999999999999


Q ss_pred             CCHHHHHHHHHhh
Q 003185          819 PTAGDLYEMFVAR  831 (840)
Q Consensus       819 PSa~ELLehLe~l  831 (840)
                      ||+.|+++|.+-.
T Consensus       254 ~t~~eil~h~~~~  266 (323)
T 3tki_A          254 ITIPDIKKDRWYN  266 (323)
T ss_dssp             CCHHHHTTCTTTT
T ss_pred             cCHHHHhhChhhc
Confidence            9999999996543


No 81 
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00  E-value=6.3e-41  Score=383.62  Aligned_cols=282  Identities=17%  Similarity=0.217  Sum_probs=208.6

Q ss_pred             CCCCceeeeeecccCceEEEEEEE--CCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeEEecC
Q 003185          503 SFPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISS  580 (840)
Q Consensus       503 ~~~~y~i~~~LG~G~fG~Vy~a~~--~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~l~g~~~~~  580 (840)
                      ..++|++.+.||+|+||.||+|.+  .+..||+|++...  .......    +++.+|+.+|+.++|||||++++++...
T Consensus        60 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~--~~~~~~~----~~~~~E~~~l~~l~hpnIv~l~~~~~~~  133 (464)
T 3ttj_A           60 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRP--FQNQTHA----KRAYRELVLMKCVNHKNIISLLNVFTPQ  133 (464)
T ss_dssp             EETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESG--GGSHHHH----HHHHHHHHHHHHCCCTTBCCCSEEECSC
T ss_pred             ecCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECcc--ccChHHH----HHHHHHHHHHHhCCCCCCCcEEEEEccC
Confidence            357899999999999999999987  5788999987532  1122222    3458999999999999999999999765


Q ss_pred             CCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCCCcEEE
Q 003185          581 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILI  660 (840)
Q Consensus       581 ~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKPeNILL  660 (840)
                      ...        ......||||||+++ +|.+.+.       ..+++..++.++.||+.||+|||++||+||||||+||||
T Consensus       134 ~~~--------~~~~~~~lv~E~~~~-~l~~~~~-------~~l~~~~~~~~~~qil~aL~~lH~~~iiHrDlkp~NIll  197 (464)
T 3ttj_A          134 KTL--------EEFQDVYLVMELMDA-NLCQVIQ-------MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV  197 (464)
T ss_dssp             CST--------TTCCEEEEEEECCSE-EHHHHHT-------SCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE
T ss_pred             Ccc--------ccCCeEEEEEeCCCC-CHHHHHh-------hcCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChHhEEE
Confidence            422        122457999999985 6777764       348999999999999999999999999999999999999


Q ss_pred             ecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHHHHHHH
Q 003185          661 DLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLE  740 (840)
Q Consensus       661 d~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLGvIL~E  740 (840)
                      +.+       +.+||+|||+|+.......           ....+||+.|+|||++.+    ..++.++|||||||+|||
T Consensus       198 ~~~-------~~~kl~DFG~a~~~~~~~~-----------~~~~~gt~~y~aPE~~~~----~~~~~~~DiwSlG~il~e  255 (464)
T 3ttj_A          198 KSD-------CTLKILDFGLARTAGTSFM-----------MTPYVVTRYYRAPEVILG----MGYKENVDIWSVGCIMGE  255 (464)
T ss_dssp             CTT-------SCEEECCCCCC-----CCC-----------C----CCCTTCCHHHHTT----CCCCTTHHHHHHHHHHHH
T ss_pred             eCC-------CCEEEEEEEeeeecCCCcc-----------cCCCcccccccCHHHHcC----CCCCHHHHHHHHHHHHHH
Confidence            977       4699999999986543211           233579999999999986    578999999999999999


Q ss_pred             HHhCCCCCCCCCHHHHHHHHHcCCCCCcchHHhhhccCccccccccCCC---------------CCCchhhhhhHHHHHH
Q 003185          741 LLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSG---------------FEKPEAELETLSFLVD  805 (840)
Q Consensus       741 LLTG~~PF~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~s~~L~d  805 (840)
                      |++|+.||.+.+..+.+..|........++.+....... ..+......               ..........+..+.+
T Consensus       256 ll~g~~pF~g~~~~~~~~~i~~~lg~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~d  334 (464)
T 3ttj_A          256 MVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTV-RNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARD  334 (464)
T ss_dssp             HHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTSCHHH-HHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHH
T ss_pred             HHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHcchhh-hhHhhcccccCCCChHHhCcccccccccccccccCHHHHH
Confidence            999999999998888777776643333333322211000 000000000               0011122233678999


Q ss_pred             HHHHhcccCCCCCCCHHHHHHHHH
Q 003185          806 VFRRCTEENPTERPTAGDLYEMFV  829 (840)
Q Consensus       806 LI~rCL~~DP~eRPSa~ELLehLe  829 (840)
                      ||.+||.+||.+|||++|+++|..
T Consensus       335 Ll~~mL~~dP~~R~ta~e~L~Hp~  358 (464)
T 3ttj_A          335 LLSKMLVIDPAKRISVDDALQHPY  358 (464)
T ss_dssp             HHHHHSCSSTTTSCCHHHHHTSTT
T ss_pred             HHHHHcCCChhhCCCHHHHhcChh
Confidence            999999999999999999999954


No 82 
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00  E-value=6.1e-41  Score=356.58  Aligned_cols=261  Identities=22%  Similarity=0.289  Sum_probs=205.5

Q ss_pred             CCCCCceeeeeecccCceEEEEEEE--CCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeEEec
Q 003185          502 GSFPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKIS  579 (840)
Q Consensus       502 ~~~~~y~i~~~LG~G~fG~Vy~a~~--~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~l~g~~~~  579 (840)
                      ...++|.+.+.||+|+||.||+|..  .+..+|+|+.........   .+    .+.+|+.+|++++||||+++++++..
T Consensus        19 ~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~---~~----~~~~E~~~l~~l~hp~iv~~~~~~~~   91 (285)
T 3is5_A           19 TIDDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVP---ME----QIEAEIEVLKSLDHPNIIKIFEVFED   91 (285)
T ss_dssp             CHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSC---HH----HHHHHHHHHHTCCCTTBCCEEEEEEC
T ss_pred             ChhhheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchh---HH----HHHHHHHHHHhCCCchHHhHHHheec
Confidence            3447899999999999999999997  567899998765432211   22    34899999999999999999999986


Q ss_pred             CCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCCCcEE
Q 003185          580 SKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENIL  659 (840)
Q Consensus       580 ~~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKPeNIL  659 (840)
                      ..              ..++||||+++++|.+++...... ...+++..++.++.||+.||.|||++||+||||||+|||
T Consensus        92 ~~--------------~~~lv~e~~~~~~L~~~l~~~~~~-~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dikp~NIl  156 (285)
T 3is5_A           92 YH--------------NMYIVMETCEGGELLERIVSAQAR-GKALSEGYVAELMKQMMNALAYFHSQHVVHKDLKPENIL  156 (285)
T ss_dssp             SS--------------EEEEEECCCSCCBHHHHHHHHHHH-TCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEE
T ss_pred             CC--------------eEEEEEEeCCCCcHHHHHHhhhhc-ccCCCHHHHHHHHHHHHHHHHHHHhCCEEECCCCHHHEE
Confidence            54              359999999999999999753322 356999999999999999999999999999999999999


Q ss_pred             EecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHHHHHH
Q 003185          660 IDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLL  739 (840)
Q Consensus       660 Ld~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLGvIL~  739 (840)
                      ++...    ..+.+||+|||++........           .....||+.|+|||++.     ..++.++|||||||++|
T Consensus       157 ~~~~~----~~~~~kl~Dfg~a~~~~~~~~-----------~~~~~~t~~y~aPE~~~-----~~~~~~~Di~slG~il~  216 (285)
T 3is5_A          157 FQDTS----PHSPIKIIDFGLAELFKSDEH-----------STNAAGTALYMAPEVFK-----RDVTFKCDIWSAGVVMY  216 (285)
T ss_dssp             ESSSS----TTCCEEECCCCCCCC---------------------CTTGGGCCHHHHT-----TCCCHHHHHHHHHHHHH
T ss_pred             EecCC----CCCCEEEEeeecceecCCccc-----------CcCcccccCcCChHHhc-----cCCCcccCeehHHHHHH
Confidence            96532    235799999999976543211           12346899999999986     35789999999999999


Q ss_pred             HHHhCCCCCCCCCHHHHHHHHHcCCCCCcchHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC
Q 003185          740 ELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP  819 (840)
Q Consensus       740 ELLTG~~PF~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L~dLI~rCL~~DP~eRP  819 (840)
                      +|++|+.||.+....++...+..........                         ....++.+.+||.+||+.||.+||
T Consensus       217 ~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~li~~~L~~dP~~Rp  271 (285)
T 3is5_A          217 FLLTGCLPFTGTSLEEVQQKATYKEPNYAVE-------------------------CRPLTPQAVDLLKQMLTKDPERRP  271 (285)
T ss_dssp             HHHHSSCSSCCSSHHHHHHHHHHCCCCCCC---------------------------CCCCHHHHHHHHHHTCSCTTTSC
T ss_pred             HHHhCCCCCCCCCHHHHHhhhccCCcccccc-------------------------cCcCCHHHHHHHHHHccCChhhCc
Confidence            9999999999988877766665442211110                         011245789999999999999999


Q ss_pred             CHHHHHHHHH
Q 003185          820 TAGDLYEMFV  829 (840)
Q Consensus       820 Sa~ELLehLe  829 (840)
                      |+.||++|..
T Consensus       272 s~~e~l~hp~  281 (285)
T 3is5_A          272 SAAQVLHHEW  281 (285)
T ss_dssp             CHHHHHTSGG
T ss_pred             CHHHHhcCHH
Confidence            9999999854


No 83 
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00  E-value=1.3e-40  Score=360.02  Aligned_cols=263  Identities=22%  Similarity=0.261  Sum_probs=212.2

Q ss_pred             CCCceeeeeecccCceEEEEEEE--CCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeEEecCC
Q 003185          504 FPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK  581 (840)
Q Consensus       504 ~~~y~i~~~LG~G~fG~Vy~a~~--~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~l~g~~~~~~  581 (840)
                      .++|++.+.||+|+||.||+|.+  .+..+|+|++..........  ....+.+.+|+.++++++||||+++++++....
T Consensus        11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~   88 (321)
T 2a2a_A           11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRR--GVSREEIEREVSILRQVLHHNVITLHDVYENRT   88 (321)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSS--SBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS
T ss_pred             hccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEeccccccccc--chhHHHHHHHHHHHHhCCCCCcceEEEEEecCC
Confidence            45799999999999999999998  47789999976543322111  011233489999999999999999999998654


Q ss_pred             CCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCCCcEEEe
Q 003185          582 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID  661 (840)
Q Consensus       582 ~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKPeNILLd  661 (840)
                                    ..++||||+++++|.+++..     ...+++..++.++.||+.||.|||++||+||||||+|||++
T Consensus        89 --------------~~~lv~e~~~~~~L~~~l~~-----~~~~~~~~~~~i~~qi~~aL~~lH~~~ivH~dikp~NIl~~  149 (321)
T 2a2a_A           89 --------------DVVLILELVSGGELFDFLAQ-----KESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLL  149 (321)
T ss_dssp             --------------EEEEEECCCCSCBHHHHHHT-----CSCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEES
T ss_pred             --------------EEEEEEEcCCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChHHEEEe
Confidence                          35999999999999999975     35689999999999999999999999999999999999998


Q ss_pred             cccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHHHHHHHH
Q 003185          662 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL  741 (840)
Q Consensus       662 ~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLGvIL~EL  741 (840)
                      .++.   ....+||+|||++........           .....||+.|+|||++.+    ..++.++|||||||++|+|
T Consensus       150 ~~~~---~~~~~kl~Dfg~~~~~~~~~~-----------~~~~~gt~~y~aPE~~~~----~~~~~~~Di~slG~il~~l  211 (321)
T 2a2a_A          150 DKNI---PIPHIKLIDFGLAHEIEDGVE-----------FKNIFGTPEFVAPEIVNY----EPLGLEADMWSIGVITYIL  211 (321)
T ss_dssp             CTTS---SSCCEEECCCTTCEECCTTCC-----------CCCCCSCGGGCCHHHHTT----CCCCTHHHHHHHHHHHHHH
T ss_pred             cCCC---CcCCEEEccCccceecCcccc-----------ccccCCCCCccCcccccC----CCCCCccccHHHHHHHHHH
Confidence            7631   123699999999986643211           123469999999999976    6689999999999999999


Q ss_pred             HhCCCCCCCCCHHHHHHHHHcCCCCCcchHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH
Q 003185          742 LTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA  821 (840)
Q Consensus       742 LTG~~PF~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L~dLI~rCL~~DP~eRPSa  821 (840)
                      ++|..||.+....+....+........+..                        ....+..+.+||.+||..||.+|||+
T Consensus       212 ~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~------------------------~~~~~~~~~~li~~~l~~dp~~Rps~  267 (321)
T 2a2a_A          212 LSGASPFLGDTKQETLANITSVSYDFDEEF------------------------FSHTSELAKDFIRKLLVKETRKRLTI  267 (321)
T ss_dssp             HHSCCSSCCSSHHHHHHHHHTTCCCCCHHH------------------------HTTCCHHHHHHHHTTSCSSTTTSCCH
T ss_pred             HHCCCCCCCCCHHHHHHHHHhcccccChhh------------------------hcccCHHHHHHHHHHcCCChhhCcCH
Confidence            999999999888888777766533211111                        12235578999999999999999999


Q ss_pred             HHHHHHHH
Q 003185          822 GDLYEMFV  829 (840)
Q Consensus       822 ~ELLehLe  829 (840)
                      .++++|..
T Consensus       268 ~e~l~hp~  275 (321)
T 2a2a_A          268 QEALRHPW  275 (321)
T ss_dssp             HHHHHSTT
T ss_pred             HHHhcCcc
Confidence            99999854


No 84 
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=5.1e-41  Score=365.27  Aligned_cols=267  Identities=25%  Similarity=0.335  Sum_probs=206.9

Q ss_pred             CCCCCceeeeeecccCceEEEEEEE-------CCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhC-CCCCccee
Q 003185          502 GSFPSLSSCDEAGKSVSSSLFRCKF-------GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEM  573 (840)
Q Consensus       502 ~~~~~y~i~~~LG~G~fG~Vy~a~~-------~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L-~HpNIV~l  573 (840)
                      .+.++|.+.+.||+|+||.||+|.+       .+..||+|+.....   ....    ...+.+|+.+|+++ +||||+++
T Consensus        42 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~---~~~~----~~~~~~E~~~l~~l~~hp~iv~~  114 (344)
T 1rjb_A           42 FPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKA---DSSE----REALMSELKMMTQLGSHENIVNL  114 (344)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC-------------CHHHHHHHHHHHHHCCCTTBCCE
T ss_pred             cCHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEeccccc---CHHH----HHHHHHHHHHHHhhcCCCCeeeE
Confidence            4567899999999999999999996       34579999875321   1112    23458999999999 89999999


Q ss_pred             eeEEecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhcc------------------CCCCCCHHHHHHHHHH
Q 003185          574 YGHKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSET------------------GEKHVSVKLALFIAQD  635 (840)
Q Consensus       574 ~g~~~~~~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~------------------~~~~ls~~~~~~Ia~Q  635 (840)
                      ++++......              +|||||+++|+|.+++......                  ....+++..++.++.|
T Consensus       115 ~~~~~~~~~~--------------~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~q  180 (344)
T 1rjb_A          115 LGACTLSGPI--------------YLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQ  180 (344)
T ss_dssp             EEEECSSSSC--------------EEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHH
T ss_pred             EEEEeeCCcc--------------EEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHH
Confidence            9999866543              9999999999999999752110                  0134789999999999


Q ss_pred             HHHHHHHHHhCCeecccCCCCcEEEecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhh
Q 003185          636 VAAALVELHSKHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEV  715 (840)
Q Consensus       636 Ia~AL~yLHs~gIVHRDLKPeNILLd~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEv  715 (840)
                      |+.||.|||++||+||||||+||||+.+       +.+||+|||++..........        ......||+.|+|||+
T Consensus       181 i~~aL~~LH~~~ivH~Dikp~NIll~~~-------~~~kL~Dfg~~~~~~~~~~~~--------~~~~~~~t~~y~aPE~  245 (344)
T 1rjb_A          181 VAKGMEFLEFKSCVHRDLAARNVLVTHG-------KVVKICDFGLARDIMSDSNYV--------VRGNARLPVKWMAPES  245 (344)
T ss_dssp             HHHHHHHHHHTTEEETTCSGGGEEEETT-------TEEEECCCGGGSCGGGCTTSE--------EETTEEECGGGCCHHH
T ss_pred             HHHHHHHHHhCCcccCCCChhhEEEcCC-------CcEEeCCCccCcccccCccce--------eccCccCccCccCHHH
Confidence            9999999999999999999999999877       569999999998664432110        1123457889999999


Q ss_pred             hhcccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHH-HHHHHHcCCCCCcchHHhhhccCccccccccCCCCCCc
Q 003185          716 LRAMHKPNLYGLEVDIWSYGCLLLELLT-LQVPYMGLSELE-IHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKP  793 (840)
Q Consensus       716 L~~~~~~~~~s~kSDVWSLGvIL~ELLT-G~~PF~~~~~~e-l~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~  793 (840)
                      +.+    ..++.++|||||||+||+|+| |..||.+..... +...+.....+..+.                       
T Consensus       246 ~~~----~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~-----------------------  298 (344)
T 1rjb_A          246 LFE----GIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQNGFKMDQPF-----------------------  298 (344)
T ss_dssp             HHH----CCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHTTCCCCCCT-----------------------
T ss_pred             hcc----CCCChhHhHHHHHHHHHHHHcCCCCCcccCCcHHHHHHHHhcCCCCCCCC-----------------------
Confidence            986    678999999999999999998 999998776443 333444333322221                       


Q ss_pred             hhhhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhcCCC
Q 003185          794 EAELETLSFLVDVFRRCTEENPTERPTAGDLYEMFVARTSSS  835 (840)
Q Consensus       794 ~~~~~~s~~L~dLI~rCL~~DP~eRPSa~ELLehLe~l~~~~  835 (840)
                          ..++.+.+||.+||..||.+|||+.+|+++|+.+....
T Consensus       299 ----~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~  336 (344)
T 1rjb_A          299 ----YATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLADA  336 (344)
T ss_dssp             ----TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC---
T ss_pred             ----CCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHH
Confidence                12457999999999999999999999999999987653


No 85 
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00  E-value=3.3e-41  Score=365.65  Aligned_cols=260  Identities=22%  Similarity=0.298  Sum_probs=207.3

Q ss_pred             CCCCCceeeeeecccCceEEEEEEEC--Cee----EEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeee
Q 003185          502 GSFPSLSSCDEAGKSVSSSLFRCKFG--SAD----AAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYG  575 (840)
Q Consensus       502 ~~~~~y~i~~~LG~G~fG~Vy~a~~~--~~~----vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~l~g  575 (840)
                      ...++|++.+.||+|+||.||+|.+.  +..    +++|+.....   .......    +.+|+.++++++||||+++++
T Consensus        10 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~---~~~~~~~----~~~e~~~l~~l~h~~iv~~~~   82 (325)
T 3kex_A           10 FKETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKS---GRQSFQA----VTDHMLAIGSLDHAHIVRLLG   82 (325)
T ss_dssp             CCTTTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTT---SCSCBCS----CCHHHHHHHTCCCTTBCCEEE
T ss_pred             cCHhHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccc---cHHHHHH----HHHHHHHHhcCCCCCcCeEEE
Confidence            45678999999999999999999973  333    6666643221   1111223    378999999999999999999


Q ss_pred             EEecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCC
Q 003185          576 HKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKS  655 (840)
Q Consensus       576 ~~~~~~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKP  655 (840)
                      ++...               ..++||||+.+|+|.+++..    ....+++..++.|+.||+.||.|||++||+||||||
T Consensus        83 ~~~~~---------------~~~~v~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp  143 (325)
T 3kex_A           83 LCPGS---------------SLQLVTQYLPLGSLLDHVRQ----HRGALGPQLLLNWGVQIAKGMYYLEEHGMVHRNLAA  143 (325)
T ss_dssp             EECBS---------------SEEEEEECCTTCBSHHHHHS----SGGGSCTTHHHHHHHHHHHHHHHHHHTTCCCSCCSS
T ss_pred             EEcCC---------------ccEEEEEeCCCCCHHHHHHH----ccccCCHHHHHHHHHHHHHHHHHHHhCCCCCCccch
Confidence            88532               24899999999999999974    234688999999999999999999999999999999


Q ss_pred             CcEEEecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHH
Q 003185          656 ENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYG  735 (840)
Q Consensus       656 eNILLd~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLG  735 (840)
                      +|||++.+       +.+||+|||+++.+......        .......||+.|+|||++.+    ..++.++||||||
T Consensus       144 ~Nil~~~~-------~~~kl~Dfg~a~~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~----~~~~~~~Di~slG  204 (325)
T 3kex_A          144 RNVLLKSP-------SQVQVADFGVADLLPPDDKQ--------LLYSEAKTPIKWMALESIHF----GKYTHQSDVWSYG  204 (325)
T ss_dssp             TTEEESSS-------SCEEECSCSGGGGSCCCTTC--------CC-----CCTTTSCHHHHHH----CCCCHHHHHHHHH
T ss_pred             heEEECCC-------CeEEECCCCcccccCccccc--------ccccCCCCcccccChHHhcc----CCCChhhHhHHhH
Confidence            99999877       45999999999876443211        11233468889999999987    6689999999999


Q ss_pred             HHHHHHHh-CCCCCCCCCHHHHHHHHHcCCCCCcchHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccC
Q 003185          736 CLLLELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEEN  814 (840)
Q Consensus       736 vIL~ELLT-G~~PF~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L~dLI~rCL~~D  814 (840)
                      |++|+|+| |..||.+....++...+.....+..+..                           .+..+.+||.+||..|
T Consensus       205 ~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~li~~~l~~d  257 (325)
T 3kex_A          205 VTVWELMTFGAEPYAGLRLAEVPDLLEKGERLAQPQI---------------------------CTIDVYMVMVKCWMID  257 (325)
T ss_dssp             HHHHHHHTTSCCTTTTSCTTHHHHHHHTTCBCCCCTT---------------------------BCTTTTHHHHHHTCSC
T ss_pred             HHHHHHHhCCCCCccccCHHHHHHHHHcCCCCCCCCc---------------------------CcHHHHHHHHHHcCCC
Confidence            99999999 9999998888888777776654433321                           1235788999999999


Q ss_pred             CCCCCCHHHHHHHHHhhcC
Q 003185          815 PTERPTAGDLYEMFVARTS  833 (840)
Q Consensus       815 P~eRPSa~ELLehLe~l~~  833 (840)
                      |.+|||+.+|+++|+.+..
T Consensus       258 p~~Rps~~el~~~l~~~~~  276 (325)
T 3kex_A          258 ENIRPTFKELANEFTRMAR  276 (325)
T ss_dssp             TTTSCCHHHHHHHHHHHTT
T ss_pred             hhhCcCHHHHHHHHHHHHh
Confidence            9999999999999998864


No 86 
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=3.1e-41  Score=369.37  Aligned_cols=290  Identities=22%  Similarity=0.232  Sum_probs=207.6

Q ss_pred             CCCCCceeeeeecccCceEEEEEEE--CCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeEEec
Q 003185          502 GSFPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKIS  579 (840)
Q Consensus       502 ~~~~~y~i~~~LG~G~fG~Vy~a~~--~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~l~g~~~~  579 (840)
                      ...++|++.+.||+|+||.||+|.+  .+..||+|++.......   ....+...+.+|+.+++.++||||+++++++..
T Consensus         7 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~---~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~   83 (346)
T 1ua2_A            7 SRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSE---AKDGINRTALREIKLLQELSHPNIIGLLDAFGH   83 (346)
T ss_dssp             ------CEEEEEEEETTEEEEEEECSSCCSEEEEEEC---------------CTHHHHHHHHHHHCCCTTBCCEEEEECC
T ss_pred             HHhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcch---hhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEee
Confidence            3467899999999999999999997  47789999865432211   111222345899999999999999999999976


Q ss_pred             CCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCCCcEE
Q 003185          580 SKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENIL  659 (840)
Q Consensus       580 ~~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKPeNIL  659 (840)
                      ....              ++||||+++ +|..++..    ....+++..++.++.||+.||.|||++||+||||||+|||
T Consensus        84 ~~~~--------------~lv~e~~~~-~l~~~~~~----~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil  144 (346)
T 1ua2_A           84 KSNI--------------SLVFDFMET-DLEVIIKD----NSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLL  144 (346)
T ss_dssp             TTCC--------------EEEEECCSE-EHHHHHTT----CCSSCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEE
T ss_pred             CCce--------------EEEEEcCCC-CHHHHHHh----cCcCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHEE
Confidence            5543              999999985 89888864    3356889999999999999999999999999999999999


Q ss_pred             EecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHHHHHH
Q 003185          660 IDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLL  739 (840)
Q Consensus       660 Ld~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLGvIL~  739 (840)
                      ++.+       +.+||+|||+++.+.....          ......||+.|+|||++.+   ...++.++|||||||++|
T Consensus       145 ~~~~-------~~~kl~Dfg~a~~~~~~~~----------~~~~~~~t~~y~aPE~~~~---~~~~~~~~DiwslG~il~  204 (346)
T 1ua2_A          145 LDEN-------GVLKLADFGLAKSFGSPNR----------AYTHQVVTRWYRAPELLFG---ARMYGVGVDMWAVGCILA  204 (346)
T ss_dssp             ECTT-------CCEEECCCGGGSTTTSCCC----------CCCCSCCCCTTCCHHHHTT---CSCCCHHHHHHHHHHHHH
T ss_pred             EcCC-------CCEEEEecccceeccCCcc----------cCCcccccccccCchHhhC---CCCCCchhhhHhHHHHHH
Confidence            9877       4699999999986643211          1233468999999999975   245789999999999999


Q ss_pred             HHHhCCCCCCCCCHHHHHHHHHcCCCCCcchHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC
Q 003185          740 ELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP  819 (840)
Q Consensus       740 ELLTG~~PF~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L~dLI~rCL~~DP~eRP  819 (840)
                      +|++|.+||.+.+..+....+...........+...........................+..+.+||.+||..||.+||
T Consensus       205 ell~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp  284 (346)
T 1ua2_A          205 ELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARI  284 (346)
T ss_dssp             HHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSC
T ss_pred             HHHHCCCCCCCCCHHHHHHHHHHHcCCCChhhhhhhccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCC
Confidence            99999999999888777766654321111111111111000000000001111111234467899999999999999999


Q ss_pred             CHHHHHHHHHhhcC
Q 003185          820 TAGDLYEMFVARTS  833 (840)
Q Consensus       820 Sa~ELLehLe~l~~  833 (840)
                      |+.|+++|..-...
T Consensus       285 t~~ell~h~~f~~~  298 (346)
T 1ua2_A          285 TATQALKMKYFSNR  298 (346)
T ss_dssp             CHHHHHTSGGGTSS
T ss_pred             CHHHHhcChhhhcC
Confidence            99999999765443


No 87 
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00  E-value=4.7e-41  Score=376.29  Aligned_cols=258  Identities=21%  Similarity=0.278  Sum_probs=210.8

Q ss_pred             CCCCceeeeeecccCceEEEEEEE--CCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeEEecC
Q 003185          503 SFPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISS  580 (840)
Q Consensus       503 ~~~~y~i~~~LG~G~fG~Vy~a~~--~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~l~g~~~~~  580 (840)
                      ..+.|++.+.||+|+||.||+|.+  .+..+|+|+.....    .....    .+.+|+.+|+.|+||||+++++++...
T Consensus        49 ~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~----~~~~~----~~~~E~~il~~l~hpnIv~~~~~~~~~  120 (387)
T 1kob_A           49 VYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPY----PLDKY----TVKNEISIMNQLHHPKLINLHDAFEDK  120 (387)
T ss_dssp             GGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS----HHHHH----HHHHHHHHHTTCCSTTBCCEEEEEECS
T ss_pred             cccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccc----hhhHH----HHHHHHHHHHhCCCcCCCeEEEEEEeC
Confidence            457899999999999999999998  56789999875321    22222    348999999999999999999999865


Q ss_pred             CCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCCCcEEE
Q 003185          581 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILI  660 (840)
Q Consensus       581 ~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKPeNILL  660 (840)
                      .              ..+|||||+.+|+|.+++..    ....+++..++.++.||+.||.|||++||+||||||+|||+
T Consensus       121 ~--------------~~~lv~E~~~gg~L~~~l~~----~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll  182 (387)
T 1kob_A          121 Y--------------EMVLILEFLSGGELFDRIAA----EDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMC  182 (387)
T ss_dssp             S--------------EEEEEEECCCCCBHHHHTTC----TTCCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE
T ss_pred             C--------------EEEEEEEcCCCCcHHHHHHh----hcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccchHHeEE
Confidence            5              35999999999999998864    23469999999999999999999999999999999999999


Q ss_pred             ecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHHHHHHH
Q 003185          661 DLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLE  740 (840)
Q Consensus       661 d~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLGvIL~E  740 (840)
                      +.++     .+.+||+|||+++.......           .....||+.|+|||++.+    ..++.++|||||||++||
T Consensus       183 ~~~~-----~~~vkL~DFG~a~~~~~~~~-----------~~~~~gt~~y~aPE~~~~----~~~~~~~DiwSlG~il~e  242 (387)
T 1kob_A          183 ETKK-----ASSVKIIDFGLATKLNPDEI-----------VKVTTATAEFAAPEIVDR----EPVGFYTDMWAIGVLGYV  242 (387)
T ss_dssp             SSTT-----CCCEEECCCTTCEECCTTSC-----------EEEECSSGGGCCHHHHTT----CCBCHHHHHHHHHHHHHH
T ss_pred             ecCC-----CCceEEEecccceecCCCcc-----------eeeeccCCCccCchhccC----CCCCCcccEeeHhHHHHH
Confidence            7542     25699999999987643221           122369999999999986    668999999999999999


Q ss_pred             HHhCCCCCCCCCHHHHHHHHHcCCCCCcchHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCC
Q 003185          741 LLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPT  820 (840)
Q Consensus       741 LLTG~~PF~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L~dLI~rCL~~DP~eRPS  820 (840)
                      |++|..||.+.+..+....+..........                        .....+..+.+||.+||..||.+|||
T Consensus       243 lltg~~Pf~~~~~~~~~~~i~~~~~~~~~~------------------------~~~~~s~~~~~li~~~L~~dP~~Rpt  298 (387)
T 1kob_A          243 LLSGLSPFAGEDDLETLQNVKRCDWEFDED------------------------AFSSVSPEAKDFIKNLLQKEPRKRLT  298 (387)
T ss_dssp             HHHSCCSSCCSSHHHHHHHHHHCCCCCCSS------------------------TTTTSCHHHHHHHHTTSCSSGGGSCC
T ss_pred             HHhCCCCCCCCCHHHHHHHHHhCCCCCCcc------------------------ccccCCHHHHHHHHHHcCCChhHCcC
Confidence            999999999988888777776653221110                        11123567999999999999999999


Q ss_pred             HHHHHHHHHh
Q 003185          821 AGDLYEMFVA  830 (840)
Q Consensus       821 a~ELLehLe~  830 (840)
                      +.++++|..-
T Consensus       299 ~~ell~hp~~  308 (387)
T 1kob_A          299 VHDALEHPWL  308 (387)
T ss_dssp             HHHHHTSTTT
T ss_pred             HHHHhhCccc
Confidence            9999998654


No 88 
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00  E-value=7.2e-41  Score=372.08  Aligned_cols=293  Identities=19%  Similarity=0.241  Sum_probs=203.3

Q ss_pred             CCCCCceeeeeecccCceEEEEEEE--CCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCC-CCCcceeeeEEe
Q 003185          502 GSFPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALR-HSCIVEMYGHKI  578 (840)
Q Consensus       502 ~~~~~y~i~~~LG~G~fG~Vy~a~~--~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~-HpNIV~l~g~~~  578 (840)
                      ..+++|++.+.||+|+||.||+|.+  .+..||+|++..  .........    ++.+|+.+|+.+. ||||+++++++.
T Consensus         6 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~--~~~~~~~~~----~~~~E~~~l~~l~~h~niv~l~~~~~   79 (388)
T 3oz6_A            6 HVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFD--AFQNSTDAQ----RTFREIMILTELSGHENIVNLLNVLR   79 (388)
T ss_dssp             HHHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC----CCHHHHH----HHHHHHHHHHHTTTCTTBCCEEEEEE
T ss_pred             cccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecc--cccChHHHH----HHHHHHHHHHhccCCCCCCeeeeEEe
Confidence            3467899999999999999999987  577899998632  222333333    3489999999998 999999999997


Q ss_pred             cCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCCCcE
Q 003185          579 SSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENI  658 (840)
Q Consensus       579 ~~~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKPeNI  658 (840)
                      ..+.            ...||||||++ ++|..++..      ..+++..+..++.||+.||+|||++||+||||||+||
T Consensus        80 ~~~~------------~~~~lv~e~~~-~~L~~~~~~------~~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NI  140 (388)
T 3oz6_A           80 ADND------------RDVYLVFDYME-TDLHAVIRA------NILEPVHKQYVVYQLIKVIKYLHSGGLLHRDMKPSNI  140 (388)
T ss_dssp             CTTS------------SCEEEEEECCS-EEHHHHHHH------TCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGE
T ss_pred             cCCC------------CEEEEEecccC-cCHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHe
Confidence            5432            24699999998 599999976      4689999999999999999999999999999999999


Q ss_pred             EEecccccCCCCCeEEEeecCCccccccccccccc-----------ccCCCCCCCcccCCCcccchhhhhcccCCCCCCc
Q 003185          659 LIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCI-----------AHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGL  727 (840)
Q Consensus       659 LLd~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~-----------~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~  727 (840)
                      ||+.+       +.+||+|||+|+.+.........           ...........+||+.|+|||++.+   ...++.
T Consensus       141 ll~~~-------~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~  210 (388)
T 3oz6_A          141 LLNAE-------CHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLG---STKYTK  210 (388)
T ss_dssp             EECTT-------CCEEECCCTTCEESSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTT---CCCCCT
T ss_pred             EEcCC-------CCEEecCCcccccccccccccccccccccccccccccccccccCCcccCCcCCHHHhcC---CCCCCC
Confidence            99877       46999999999876432111000           0001112234579999999999975   356899


Q ss_pred             hhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCcchHHhhhccCccccc----cc----cCCCCCC--c----
Q 003185          728 EVDIWSYGCLLLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEV----AQ----SGSGFEK--P----  793 (840)
Q Consensus       728 kSDVWSLGvIL~ELLTG~~PF~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~----~~----~~~~~~~--~----  793 (840)
                      ++|||||||+||||++|++||.+.+..+.+..+......+..+.+..........+    ..    .......  +    
T Consensus       211 ~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  290 (388)
T 3oz6_A          211 GIDMWSLGCILGEILCGKPIFPGSSTMNQLERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKN  290 (388)
T ss_dssp             HHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHH
T ss_pred             hhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhh
Confidence            99999999999999999999999988887777654322222222211100000000    00    0000000  0    


Q ss_pred             -----hhhhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 003185          794 -----EAELETLSFLVDVFRRCTEENPTERPTAGDLYEMFV  829 (840)
Q Consensus       794 -----~~~~~~s~~L~dLI~rCL~~DP~eRPSa~ELLehLe  829 (840)
                           ......++.+.+||.+||..||.+|||++|+++|..
T Consensus       291 ~~~~~~~~~~~~~~~~dll~~~L~~dP~~R~t~~e~l~Hp~  331 (388)
T 3oz6_A          291 LLLKINPKADCNEEALDLLDKLLQFNPNKRISANDALKHPF  331 (388)
T ss_dssp             HHHHHCTTCCCCHHHHHHHHHHCCSSGGGSCCHHHHTTSTT
T ss_pred             hcccccccccCCHHHHHHHHHhhccCcccCCCHHHHhCCHH
Confidence                 000134568999999999999999999999999954


No 89 
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=1.2e-40  Score=353.68  Aligned_cols=261  Identities=22%  Similarity=0.300  Sum_probs=212.6

Q ss_pred             CCCCceeee-eecccCceEEEEEEE----CCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeEE
Q 003185          503 SFPSLSSCD-EAGKSVSSSLFRCKF----GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHK  577 (840)
Q Consensus       503 ~~~~y~i~~-~LG~G~fG~Vy~a~~----~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~l~g~~  577 (840)
                      ..++|.+.+ .||+|+||.||+|.+    .+..+|+|+....   ......+    .+.+|+.++++++||||+++++++
T Consensus         7 ~~~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~---~~~~~~~----~~~~E~~~l~~l~h~~i~~~~~~~   79 (287)
T 1u59_A            7 KRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQG---TEKADTE----EMMREAQIMHQLDNPYIVRLIGVC   79 (287)
T ss_dssp             CGGGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSS---CCHHHHH----HHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             cHHHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCc---cchhHHH----HHHHHHHHHHhCCCCCEeEEEEEe
Confidence            346777877 999999999999986    4667999986532   1223333    348999999999999999999998


Q ss_pred             ecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCCCc
Q 003185          578 ISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSEN  657 (840)
Q Consensus       578 ~~~~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKPeN  657 (840)
                      ...               ..++||||+++++|.+++..    ....+++..++.++.||+.||.|||++||+||||||+|
T Consensus        80 ~~~---------------~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~N  140 (287)
T 1u59_A           80 QAE---------------ALMLVMEMAGGGPLHKFLVG----KREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARN  140 (287)
T ss_dssp             ESS---------------SEEEEEECCTTEEHHHHHTT----CTTTSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGG
T ss_pred             cCC---------------CcEEEEEeCCCCCHHHHHHh----CCccCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCchhe
Confidence            432               24999999999999999864    23569999999999999999999999999999999999


Q ss_pred             EEEecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHHHH
Q 003185          658 ILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCL  737 (840)
Q Consensus       658 ILLd~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLGvI  737 (840)
                      ||++.+       +.+||+|||++..........       .......||+.|+|||++.+    ..++.++|||||||+
T Consensus       141 ili~~~-------~~~kl~Dfg~~~~~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~----~~~~~~~Di~slG~i  202 (287)
T 1u59_A          141 VLLVNR-------HYAKISDFGLSKALGADDSYY-------TARSAGKWPLKWYAPECINF----RKFSSRSDVWSYGVT  202 (287)
T ss_dssp             EEEEET-------TEEEECCCTTCEECTTCSCEE-------CCCCSSCCCGGGCCHHHHHH----CEECHHHHHHHHHHH
T ss_pred             EEEcCC-------CCEEECcccceeeeccCccee-------eccccccccccccCHHHhcc----CCCCchhhHHHHHHH
Confidence            999877       569999999998764332111       01122357899999999986    567899999999999


Q ss_pred             HHHHHh-CCCCCCCCCHHHHHHHHHcCCCCCcchHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCC
Q 003185          738 LLELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPT  816 (840)
Q Consensus       738 L~ELLT-G~~PF~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L~dLI~rCL~~DP~  816 (840)
                      +|+|++ |+.||......++...+..+..+.++.                           ..++.+.+||.+||..||.
T Consensus       203 l~ellt~g~~p~~~~~~~~~~~~i~~~~~~~~~~---------------------------~~~~~l~~li~~~l~~~p~  255 (287)
T 1u59_A          203 MWEALSYGQKPYKKMKGPEVMAFIEQGKRMECPP---------------------------ECPPELYALMSDCWIYKWE  255 (287)
T ss_dssp             HHHHHTTSCCTTTTCCTHHHHHHHHTTCCCCCCT---------------------------TCCHHHHHHHHHTTCSSGG
T ss_pred             HHHHHcCCCCCcccCCHHHHHHHHhcCCcCCCCC---------------------------CcCHHHHHHHHHHcCCChh
Confidence            999998 999999888888887777765443332                           1245799999999999999


Q ss_pred             CCCCHHHHHHHHHhhcCC
Q 003185          817 ERPTAGDLYEMFVARTSS  834 (840)
Q Consensus       817 eRPSa~ELLehLe~l~~~  834 (840)
                      +||++.+|+++|+.+..+
T Consensus       256 ~Rps~~~l~~~l~~~~~~  273 (287)
T 1u59_A          256 DRPDFLTVEQRMRACYYS  273 (287)
T ss_dssp             GSCCHHHHHHHHHHHHHH
T ss_pred             hCcCHHHHHHHHHHHHHh
Confidence            999999999999988643


No 90 
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00  E-value=7e-41  Score=362.56  Aligned_cols=268  Identities=24%  Similarity=0.371  Sum_probs=211.3

Q ss_pred             CCCCCCCCCceeeeeecccCceEEEEEEE--CCeeE--EEEEEecccCCCChHHHHHhHHhHHHHHHHHHhC-CCCCcce
Q 003185          498 GLDPGSFPSLSSCDEAGKSVSSSLFRCKF--GSADA--AAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVE  572 (840)
Q Consensus       498 ~~~p~~~~~y~i~~~LG~G~fG~Vy~a~~--~~~~v--AVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L-~HpNIV~  572 (840)
                      .++...+++|++.+.||+|+||.||+|.+  .+..+  ++|+....   ......    +.+.+|+.+++++ +||||++
T Consensus        18 ~~p~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~---~~~~~~----~~~~~E~~~l~~l~~hp~iv~   90 (327)
T 1fvr_A           18 IYPVLDWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEY---ASKDDH----RDFAGELEVLCKLGHHPNIIN   90 (327)
T ss_dssp             CSSBCCGGGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC-------------CHHHHHHHHHTTCCCCTTBCC
T ss_pred             ccccccHHHccceeeeecCCCceEEEEEEccCCcccceeeeeeccc---cchHHH----HHHHHHHHHHHhccCCCchhh
Confidence            34557789999999999999999999986  45544  66665321   112222    2348999999999 8999999


Q ss_pred             eeeEEecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHh-----------ccCCCCCCHHHHHHHHHHHHHHHH
Q 003185          573 MYGHKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLS-----------ETGEKHVSVKLALFIAQDVAAALV  641 (840)
Q Consensus       573 l~g~~~~~~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~-----------~~~~~~ls~~~~~~Ia~QIa~AL~  641 (840)
                      +++++.....              .||||||+++++|.+++....           ......+++..++.++.||+.||.
T Consensus        91 ~~~~~~~~~~--------------~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~  156 (327)
T 1fvr_A           91 LLGACEHRGY--------------LYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMD  156 (327)
T ss_dssp             EEEEEEETTE--------------EEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHH
T ss_pred             hceeeeeCCc--------------eEEEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHH
Confidence            9999986653              599999999999999997521           011246899999999999999999


Q ss_pred             HHHhCCeecccCCCCcEEEecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccC
Q 003185          642 ELHSKHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHK  721 (840)
Q Consensus       642 yLHs~gIVHRDLKPeNILLd~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~  721 (840)
                      |||++||+||||||+|||++.+       +.+||+|||+++.......           .....+|+.|+|||++.+   
T Consensus       157 ~LH~~~ivH~dlkp~NIl~~~~-------~~~kL~Dfg~~~~~~~~~~-----------~~~~~~~~~y~aPE~~~~---  215 (327)
T 1fvr_A          157 YLSQKQFIHRDLAARNILVGEN-------YVAKIADFGLSRGQEVYVK-----------KTMGRLPVRWMAIESLNY---  215 (327)
T ss_dssp             HHHHTTEECSCCSGGGEEECGG-------GCEEECCTTCEESSCEECC-----------C----CCTTTCCHHHHHH---
T ss_pred             HHHhCCccCCCCccceEEEcCC-------CeEEEcccCcCcccccccc-----------ccCCCCCccccChhhhcc---
Confidence            9999999999999999999877       4699999999874332111           122357889999999986   


Q ss_pred             CCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHcCCCCCcchHHhhhccCccccccccCCCCCCchhhhhhH
Q 003185          722 PNLYGLEVDIWSYGCLLLELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETL  800 (840)
Q Consensus       722 ~~~~s~kSDVWSLGvIL~ELLT-G~~PF~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s  800 (840)
                       ..++.++|||||||++|+|++ |..||.+.+..++...+..+..+..+.                           ..+
T Consensus       216 -~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~  267 (327)
T 1fvr_A          216 -SVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKPL---------------------------NCD  267 (327)
T ss_dssp             -CEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHGGGTCCCCCCT---------------------------TBC
T ss_pred             -ccCCchhcchHHHHHHHHHHcCCCCCCCCCcHHHHHHHhhcCCCCCCCC---------------------------CCC
Confidence             567899999999999999998 999999988888777766553332221                           224


Q ss_pred             HHHHHHHHHhcccCCCCCCCHHHHHHHHHhhcCCC
Q 003185          801 SFLVDVFRRCTEENPTERPTAGDLYEMFVARTSSS  835 (840)
Q Consensus       801 ~~L~dLI~rCL~~DP~eRPSa~ELLehLe~l~~~~  835 (840)
                      ..+.+||.+||..||.+|||+.+++++|..+....
T Consensus       268 ~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~  302 (327)
T 1fvr_A          268 DEVYDLMRQCWREKPYERPSFAQILVSLNRMLEER  302 (327)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSS
T ss_pred             HHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhh
Confidence            57999999999999999999999999999887543


No 91 
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00  E-value=1.5e-40  Score=350.31  Aligned_cols=256  Identities=23%  Similarity=0.279  Sum_probs=207.7

Q ss_pred             CCCceeeeeecccCceEEEEEEEC--CeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeEEecCC
Q 003185          504 FPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK  581 (840)
Q Consensus       504 ~~~y~i~~~LG~G~fG~Vy~a~~~--~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~l~g~~~~~~  581 (840)
                      .++|++.+.||+|+||.||+|.+.  +..+|+|+.......    ..+    .+.+|+.++++++||||+++++++....
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~----~~~----~~~~E~~~l~~l~h~~i~~~~~~~~~~~   79 (277)
T 3f3z_A            8 NQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVE----DVD----RFKQEIEIMKSLDHPNIIRLYETFEDNT   79 (277)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCS----CHH----HHHHHHHHHHTCCCTTBCCEEEEEECSS
T ss_pred             hhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccc----hHH----HHHHHHHHHHhCCCCCEeeEEEEEecCC
Confidence            357999999999999999999984  457888876533211    122    3489999999999999999999998655


Q ss_pred             CCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCCCcEEEe
Q 003185          582 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID  661 (840)
Q Consensus       582 ~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKPeNILLd  661 (840)
                                    ..++||||+++++|.+++..     ...+++..++.++.||+.||.|||++||+||||||+|||+.
T Consensus        80 --------------~~~lv~e~~~~~~L~~~~~~-----~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nil~~  140 (277)
T 3f3z_A           80 --------------DIYLVMELCTGGELFERVVH-----KRVFRESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFL  140 (277)
T ss_dssp             --------------EEEEEEECCCSCBHHHHHHH-----HCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEES
T ss_pred             --------------eEEEEEeccCCCcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEe
Confidence                          35999999999999999876     25689999999999999999999999999999999999994


Q ss_pred             cccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHHHHHHHH
Q 003185          662 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL  741 (840)
Q Consensus       662 ~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLGvIL~EL  741 (840)
                      .+.    ..+.+||+|||++........           .....||+.|+|||++.+     .++.++||||||+++|+|
T Consensus       141 ~~~----~~~~~~l~Dfg~~~~~~~~~~-----------~~~~~~t~~y~aPE~~~~-----~~~~~~Di~slG~~l~~l  200 (277)
T 3f3z_A          141 TDS----PDSPLKLIDFGLAARFKPGKM-----------MRTKVGTPYYVSPQVLEG-----LYGPECDEWSAGVMMYVL  200 (277)
T ss_dssp             SSS----TTCCEEECCCTTCEECCTTSC-----------BCCCCSCTTTCCHHHHTT-----CBCTTHHHHHHHHHHHHH
T ss_pred             cCC----CCCcEEEEecccceeccCccc-----------hhccCCCCCccChHHhcc-----cCCchhhehhHHHHHHHH
Confidence            321    225699999999976543221           123469999999999874     478999999999999999


Q ss_pred             HhCCCCCCCCCHHHHHHHHHcCCCCCcchHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH
Q 003185          742 LTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA  821 (840)
Q Consensus       742 LTG~~PF~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L~dLI~rCL~~DP~eRPSa  821 (840)
                      ++|..||......+....+..+........+                        ...++.+.+||.+||+.||.+|||+
T Consensus       201 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~~~li~~~l~~dp~~R~s~  256 (277)
T 3f3z_A          201 LCGYPPFSAPTDSEVMLKIREGTFTFPEKDW------------------------LNVSPQAESLIRRLLTKSPKQRITS  256 (277)
T ss_dssp             HHSSCSSCCSSHHHHHHHHHHCCCCCCHHHH------------------------TTSCHHHHHHHHHHTCSSTTTSCCH
T ss_pred             HHCCCCCCCCCHHHHHHHHHhCCCCCCchhh------------------------hcCCHHHHHHHHHHccCChhhCcCH
Confidence            9999999998888888887776443222111                        1235679999999999999999999


Q ss_pred             HHHHHHHHh
Q 003185          822 GDLYEMFVA  830 (840)
Q Consensus       822 ~ELLehLe~  830 (840)
                      .++++|..-
T Consensus       257 ~~~l~h~~~  265 (277)
T 3f3z_A          257 LQALEHEWF  265 (277)
T ss_dssp             HHHTTSHHH
T ss_pred             HHHhcCHHH
Confidence            999998553


No 92 
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00  E-value=9e-41  Score=359.79  Aligned_cols=255  Identities=25%  Similarity=0.463  Sum_probs=201.0

Q ss_pred             CCCCCceeeeeecccCceEEEEEEECCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeEEecCC
Q 003185          502 GSFPSLSSCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK  581 (840)
Q Consensus       502 ~~~~~y~i~~~LG~G~fG~Vy~a~~~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~l~g~~~~~~  581 (840)
                      +..++|++.+.||+|+||.||+|.+.+..+|+|+...      ....+    .+.+|+.+|++++||||+++++++... 
T Consensus         5 i~~~~~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~------~~~~~----~~~~E~~~l~~l~hp~iv~~~~~~~~~-   73 (307)
T 2eva_A            5 IDYKEIEVEEVVGRGAFGVVCKAKWRAKDVAIKQIES------ESERK----AFIVELRQLSRVNHPNIVKLYGACLNP-   73 (307)
T ss_dssp             CCGGGEEEEEEEECCSSSEEEEEEETTEEEEEEECSS------TTHHH----HHHHHHHHHHHCCCTTBCCEEEBCTTT-
T ss_pred             CCHhHeeeeeEeecCCCceEEEEEECCeeEEEEEecC------hhHHH----HHHHHHHHHhcCCCCCcCeEEEEEcCC-
Confidence            5678999999999999999999999999999998531      12223    348999999999999999999987522 


Q ss_pred             CCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHh---CCeecccCCCCcE
Q 003185          582 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHS---KHIMHRDIKSENI  658 (840)
Q Consensus       582 ~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs---~gIVHRDLKPeNI  658 (840)
                                     .++||||+++++|.+++...  .....++...++.++.||+.||.|||+   +||+||||||+||
T Consensus        74 ---------------~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NI  136 (307)
T 2eva_A           74 ---------------VCLVMEYAEGGSLYNVLHGA--EPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNL  136 (307)
T ss_dssp             ---------------TEEEEECCTTCBHHHHHHCS--SSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGE
T ss_pred             ---------------cEEEEEcCCCCCHHHHHhcc--CCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHE
Confidence                           39999999999999999751  111247889999999999999999999   8999999999999


Q ss_pred             EEecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHHHHH
Q 003185          659 LIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLL  738 (840)
Q Consensus       659 LLd~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLGvIL  738 (840)
                      |++.++      ..+||+|||++.......             ....||+.|+|||++.+    ..++.++|||||||++
T Consensus       137 ll~~~~------~~~kl~Dfg~~~~~~~~~-------------~~~~gt~~y~aPE~~~~----~~~~~~~Di~slG~il  193 (307)
T 2eva_A          137 LLVAGG------TVLKICDFGTACDIQTHM-------------TNNKGSAAWMAPEVFEG----SNYSEKCDVFSWGIIL  193 (307)
T ss_dssp             EEETTT------TEEEECCCCC-------------------------CCTTSSCHHHHTC----CCCCTHHHHHHHHHHH
T ss_pred             EEeCCC------CEEEEccccccccccccc-------------ccCCCCCceEChhhhCC----CCCCcHHHHHHHHHHH
Confidence            998763      358999999997553321             12358999999999976    6789999999999999


Q ss_pred             HHHHhCCCCCCCCC--HHHHHHHHHcCCCCCcchHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCC
Q 003185          739 LELLTLQVPYMGLS--ELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPT  816 (840)
Q Consensus       739 ~ELLTG~~PF~~~~--~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L~dLI~rCL~~DP~  816 (840)
                      |||++|+.||....  ...+...+.....+.+..                           ..+..+.+||.+||..||.
T Consensus       194 ~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~l~~li~~~l~~dp~  246 (307)
T 2eva_A          194 WEVITRRKPFDEIGGPAFRIMWAVHNGTRPPLIK---------------------------NLPKPIESLMTRCWSKDPS  246 (307)
T ss_dssp             HHHHHTCCTTTTTCSSHHHHHHHHHTTCCCCCBT---------------------------TCCHHHHHHHHHHTCSSGG
T ss_pred             HHHHHCCCCchhhCccHHHHHHHHhcCCCCCccc---------------------------ccCHHHHHHHHHHhcCChh
Confidence            99999999997543  333444444443333221                           1245789999999999999


Q ss_pred             CCCCHHHHHHHHHhhcCC
Q 003185          817 ERPTAGDLYEMFVARTSS  834 (840)
Q Consensus       817 eRPSa~ELLehLe~l~~~  834 (840)
                      +|||+.+|+++|+.+...
T Consensus       247 ~Rps~~ell~~L~~~~~~  264 (307)
T 2eva_A          247 QRPSMEEIVKIMTHLMRY  264 (307)
T ss_dssp             GSCCHHHHHHHHHHHGGG
T ss_pred             hCcCHHHHHHHHHHHHHh
Confidence            999999999999988643


No 93 
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00  E-value=1.2e-40  Score=358.60  Aligned_cols=266  Identities=21%  Similarity=0.321  Sum_probs=214.3

Q ss_pred             CCCCCceeeeeecccCceEEEEEEEC-------CeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceee
Q 003185          502 GSFPSLSSCDEAGKSVSSSLFRCKFG-------SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMY  574 (840)
Q Consensus       502 ~~~~~y~i~~~LG~G~fG~Vy~a~~~-------~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~l~  574 (840)
                      ...++|++.+.||+|+||.||+|.+.       +..+|+|++...   .......    .+.+|+.+++.++||||++++
T Consensus        22 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~---~~~~~~~----~~~~E~~~l~~l~h~~i~~~~   94 (322)
T 1p4o_A           22 VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEA---ASMRERI----EFLNEASVMKEFNCHHVVRLL   94 (322)
T ss_dssp             CCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTT---SCHHHHH----HHHHHHHHGGGCCCTTBCCEE
T ss_pred             chhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccc---cCHHHHH----HHHHHHHHHHhcCCCCEeeeE
Confidence            34578999999999999999999864       467888885421   1222222    348999999999999999999


Q ss_pred             eEEecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhc-----cCCCCCCHHHHHHHHHHHHHHHHHHHhCCee
Q 003185          575 GHKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSE-----TGEKHVSVKLALFIAQDVAAALVELHSKHIM  649 (840)
Q Consensus       575 g~~~~~~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~-----~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIV  649 (840)
                      +++......              ++||||+++|+|.+++.....     .....+++..++.++.||+.||.|||++||+
T Consensus        95 ~~~~~~~~~--------------~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~  160 (322)
T 1p4o_A           95 GVVSQGQPT--------------LVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFV  160 (322)
T ss_dssp             EEECSSSSC--------------EEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCB
T ss_pred             EEEccCCcc--------------EEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHCCCc
Confidence            999765543              999999999999999986321     1124578999999999999999999999999


Q ss_pred             cccCCCCcEEEecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchh
Q 003185          650 HRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEV  729 (840)
Q Consensus       650 HRDLKPeNILLd~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kS  729 (840)
                      ||||||+|||++.+       +.+||+|||+++..........        .....||+.|+|||++.+    ..++.++
T Consensus       161 H~dikp~NIli~~~-------~~~kl~Dfg~~~~~~~~~~~~~--------~~~~~~~~~y~aPE~~~~----~~~~~~~  221 (322)
T 1p4o_A          161 HRDLAARNCMVAED-------FTVKIGDFGMTRDIYETDYYRK--------GGKGLLPVRWMSPESLKD----GVFTTYS  221 (322)
T ss_dssp             CSCCSGGGEEECTT-------CCEEECCTTCCCGGGGGGCEEG--------GGSSEECGGGCCHHHHHH----CCCCHHH
T ss_pred             cCCCccceEEEcCC-------CeEEECcCcccccccccccccc--------ccCCCCCCCccChhhhcc----CCCCchh
Confidence            99999999999877       4699999999986644321110        122357889999999986    6689999


Q ss_pred             hHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHcCCCCCcchHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHH
Q 003185          730 DIWSYGCLLLELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFR  808 (840)
Q Consensus       730 DVWSLGvIL~ELLT-G~~PF~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L~dLI~  808 (840)
                      |||||||++|+|++ |..||.+.+..++...+.....+..+.                           ..+..+.+||.
T Consensus       222 Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~l~~li~  274 (322)
T 1p4o_A          222 DVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPD---------------------------NCPDMLFELMR  274 (322)
T ss_dssp             HHHHHHHHHHHHHHTSCCTTTTSCHHHHHHHHHTTCCCCCCT---------------------------TCCHHHHHHHH
T ss_pred             hHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHcCCcCCCCC---------------------------CCCHHHHHHHH
Confidence            99999999999999 899999988888887777654433221                           12457899999


Q ss_pred             HhcccCCCCCCCHHHHHHHHHhhcCC
Q 003185          809 RCTEENPTERPTAGDLYEMFVARTSS  834 (840)
Q Consensus       809 rCL~~DP~eRPSa~ELLehLe~l~~~  834 (840)
                      +||..||.+|||+.+++++|+.+...
T Consensus       275 ~~l~~dp~~Rps~~e~l~~L~~~~~~  300 (322)
T 1p4o_A          275 MCWQYNPKMRPSFLEIISSIKEEMEP  300 (322)
T ss_dssp             HHTCSSGGGSCCHHHHHHHHGGGSCT
T ss_pred             HHcCCCcccCcCHHHHHHHHHHhhcc
Confidence            99999999999999999999987553


No 94 
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00  E-value=1.3e-40  Score=364.68  Aligned_cols=283  Identities=19%  Similarity=0.247  Sum_probs=211.2

Q ss_pred             CCCCceeeeeecccCceEEEEEEE--CCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCC-----CCCcceeee
Q 003185          503 SFPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALR-----HSCIVEMYG  575 (840)
Q Consensus       503 ~~~~y~i~~~LG~G~fG~Vy~a~~--~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~-----HpNIV~l~g  575 (840)
                      .-++|.+.+.||+|+||.||+|.+  .+..||+|++..     .....    ..+..|+.+++.++     ||||+++++
T Consensus        33 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~-----~~~~~----~~~~~e~~~l~~l~~~~~~h~~iv~~~~  103 (360)
T 3llt_A           33 LNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRN-----IKKYT----RSAKIEADILKKIQNDDINNNNIVKYHG  103 (360)
T ss_dssp             ETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECS-----CHHHH----HHHHHHHHHHHHTCCCSTTGGGBCCEEE
T ss_pred             ecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEecc-----chhhh----hhhHHHHHHHHHhcccCCCCCCeecccc
Confidence            347899999999999999999998  677899998642     12222    23478999999997     999999999


Q ss_pred             EEecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCC
Q 003185          576 HKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKS  655 (840)
Q Consensus       576 ~~~~~~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKP  655 (840)
                      ++....              ..+|||||+ +++|.+++..   .....+++..++.++.||+.||+|||++||+||||||
T Consensus       104 ~~~~~~--------------~~~lv~e~~-~~~L~~~~~~---~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp  165 (360)
T 3llt_A          104 KFMYYD--------------HMCLIFEPL-GPSLYEIITR---NNYNGFHIEDIKLYCIEILKALNYLRKMSLTHTDLKP  165 (360)
T ss_dssp             EEEETT--------------EEEEEECCC-CCBHHHHHHH---TTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSG
T ss_pred             eeeECC--------------eeEEEEcCC-CCCHHHHHHh---cCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCc
Confidence            998655              359999999 8899999986   2234589999999999999999999999999999999


Q ss_pred             CcEEEeccccc------------------CCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhh
Q 003185          656 ENILIDLERKK------------------ADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLR  717 (840)
Q Consensus       656 eNILLd~~~~~------------------~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~  717 (840)
                      +||||+.....                  ....+.+||+|||++......             .....||+.|+|||++.
T Consensus       166 ~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~-------------~~~~~gt~~y~aPE~~~  232 (360)
T 3llt_A          166 ENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDY-------------HGSIINTRQYRAPEVIL  232 (360)
T ss_dssp             GGEEESCTTCCEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSC-------------CCSCCSCGGGCCHHHHT
T ss_pred             ccEEEccccccccccchhcccccccccccccCCCCEEEEeccCceecCCC-------------CcCccCcccccCcHHHc
Confidence            99999752100                  001367999999999764331             12346899999999998


Q ss_pred             cccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCcchHHhhhccCcccccccc-C-----CCC-
Q 003185          718 AMHKPNLYGLEVDIWSYGCLLLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQS-G-----SGF-  790 (840)
Q Consensus       718 ~~~~~~~~s~kSDVWSLGvIL~ELLTG~~PF~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~-~-----~~~-  790 (840)
                      +    ..++.++|||||||+||+|++|+.||.+.+..+....+.....+.....+.............. .     ... 
T Consensus       233 ~----~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~  308 (360)
T 3llt_A          233 N----LGWDVSSDMWSFGCVLAELYTGSLLFRTHEHMEHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENA  308 (360)
T ss_dssp             T----CCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTC
T ss_pred             C----CCCCCccchHHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHhcCCCCHHHHhhhhhccCccccCcccceecCcccc
Confidence            6    6789999999999999999999999999888887777766544333322222111110000000 0     000 


Q ss_pred             -----------CCchhhhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 003185          791 -----------EKPEAELETLSFLVDVFRRCTEENPTERPTAGDLYEMFV  829 (840)
Q Consensus       791 -----------~~~~~~~~~s~~L~dLI~rCL~~DP~eRPSa~ELLehLe  829 (840)
                                 ..+.......+.+.+||.+||+.||.+|||+.|+++|.+
T Consensus       309 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpta~elL~hp~  358 (360)
T 3llt_A          309 SSINSIKHVKKCLPLYKIIKHELFCDFLYSILQIDPTLRPSPAELLKHKF  358 (360)
T ss_dssp             SCHHHHHHHHTCCCHHHHCCCHHHHHHHHHHCCSSGGGSCCHHHHTTSGG
T ss_pred             cchhhhhhhhhcccccccchHHHHHHHHHHHhcCChhhCCCHHHHhcCcc
Confidence                       001111222367889999999999999999999998853


No 95 
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00  E-value=1.9e-40  Score=366.99  Aligned_cols=265  Identities=25%  Similarity=0.369  Sum_probs=218.5

Q ss_pred             CCCceeeeeecccCceEEEEEEE--CCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhC-CCCCcceeeeEEecC
Q 003185          504 FPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEMYGHKISS  580 (840)
Q Consensus       504 ~~~y~i~~~LG~G~fG~Vy~a~~--~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L-~HpNIV~l~g~~~~~  580 (840)
                      .++|.+.+.||+|+||.||+|.+  .+..||||+...............+.+.+.+|+.+++++ +||||+++++++...
T Consensus        93 ~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~  172 (365)
T 2y7j_A           93 YQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESS  172 (365)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEBS
T ss_pred             hhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEeeC
Confidence            35799999999999999999998  478999999876655455556666667789999999999 799999999998865


Q ss_pred             CCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCCCcEEE
Q 003185          581 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILI  660 (840)
Q Consensus       581 ~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKPeNILL  660 (840)
                      .              ..|+||||++|++|.+++..     ...+++..++.++.||+.||.|||+.||+||||||+|||+
T Consensus       173 ~--------------~~~lv~e~~~g~~L~~~l~~-----~~~l~~~~~~~i~~qi~~~L~~LH~~gi~H~Dlkp~NIl~  233 (365)
T 2y7j_A          173 S--------------FMFLVFDLMRKGELFDYLTE-----KVALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILL  233 (365)
T ss_dssp             S--------------EEEEEECCCTTCBHHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE
T ss_pred             C--------------EEEEEEEeCCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE
Confidence            4              35999999999999999976     2568999999999999999999999999999999999999


Q ss_pred             ecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccC--CCCCCchhhHHHHHHHH
Q 003185          661 DLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHK--PNLYGLEVDIWSYGCLL  738 (840)
Q Consensus       661 d~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~--~~~~s~kSDVWSLGvIL  738 (840)
                      +.+       +.+||+|||++..+.....           .....||+.|+|||++.+...  ...++.++|||||||++
T Consensus       234 ~~~-------~~ikl~DfG~~~~~~~~~~-----------~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il  295 (365)
T 2y7j_A          234 DDN-------MQIRLSDFGFSCHLEPGEK-----------LRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVIL  295 (365)
T ss_dssp             CTT-------CCEEECCCTTCEECCTTCC-----------BCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHH
T ss_pred             CCC-------CCEEEEecCcccccCCCcc-----------cccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHH
Confidence            877       4699999999987643221           123469999999999975321  23578899999999999


Q ss_pred             HHHHhCCCCCCCCCHHHHHHHHHcCCCCCcchHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCC
Q 003185          739 LELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTER  818 (840)
Q Consensus       739 ~ELLTG~~PF~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L~dLI~rCL~~DP~eR  818 (840)
                      |+|++|..||.+.........+..+........+                        ...+..+.+||.+||..||.+|
T Consensus       296 ~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~------------------------~~~~~~~~~li~~~L~~dP~~R  351 (365)
T 2y7j_A          296 FTLLAGSPPFWHRRQILMLRMIMEGQYQFSSPEW------------------------DDRSSTVKDLISRLLQVDPEAR  351 (365)
T ss_dssp             HHHHHSSCSSCCSSHHHHHHHHHHTCCCCCHHHH------------------------SSSCHHHHHHHHHHSCSSTTTS
T ss_pred             HHHHHCCCCCCCCCHHHHHHHHHhCCCCCCCccc------------------------ccCCHHHHHHHHHHcCCChhHC
Confidence            9999999999988888777777665432221111                        1234578999999999999999


Q ss_pred             CCHHHHHHHHH
Q 003185          819 PTAGDLYEMFV  829 (840)
Q Consensus       819 PSa~ELLehLe  829 (840)
                      ||+.++++|.+
T Consensus       352 ps~~ell~hp~  362 (365)
T 2y7j_A          352 LTAEQALQHPF  362 (365)
T ss_dssp             CCHHHHHHSGG
T ss_pred             cCHHHHhcCcc
Confidence            99999999854


No 96 
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00  E-value=5e-41  Score=365.02  Aligned_cols=271  Identities=23%  Similarity=0.241  Sum_probs=207.2

Q ss_pred             CCceeeeeecccCceEEEEEEE--CCeeEEEEEEecccCC-CChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeEEecCC
Q 003185          505 PSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCG-SSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK  581 (840)
Q Consensus       505 ~~y~i~~~LG~G~fG~Vy~a~~--~~~~vAVKI~~lk~~~-~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~l~g~~~~~~  581 (840)
                      ++|++.+.||+|+||.||+|.+  .+..+|+|++...... ......    +.+.+|+.++++++||||+++++++....
T Consensus        26 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~----~~~~~E~~~l~~l~hpniv~~~~~~~~~~  101 (345)
T 3hko_A           26 KKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDV----ERIKTEVRLMKKLHHPNIARLYEVYEDEQ  101 (345)
T ss_dssp             HHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHH----HHHHHHHHHHHHCCCTTBCCEEEEEECSS
T ss_pred             hheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHH----HHHHHHHHHHHhCCCCCcceeehhhccCC
Confidence            5799999999999999999997  5668899987543211 111222    34589999999999999999999998655


Q ss_pred             CCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhc-----------------------------------cCCCCCCH
Q 003185          582 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSE-----------------------------------TGEKHVSV  626 (840)
Q Consensus       582 ~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~-----------------------------------~~~~~ls~  626 (840)
                                    ..+|||||+++|+|.+++.....                                   .....+++
T Consensus       102 --------------~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  167 (345)
T 3hko_A          102 --------------YICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQRE  167 (345)
T ss_dssp             --------------EEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHH
T ss_pred             --------------eEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccH
Confidence                          35999999999999999842110                                   01223467


Q ss_pred             HHHHHHHHHHHHHHHHHHhCCeecccCCCCcEEEecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccC
Q 003185          627 KLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVG  706 (840)
Q Consensus       627 ~~~~~Ia~QIa~AL~yLHs~gIVHRDLKPeNILLd~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vG  706 (840)
                      ..++.|+.||+.||+|||++||+||||||+|||++.++     ...+||+|||++..+......      .........|
T Consensus       168 ~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~-----~~~~kl~Dfg~a~~~~~~~~~------~~~~~~~~~g  236 (345)
T 3hko_A          168 KLISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTNK-----SFEIKLVDFGLSKEFYKLNNG------EYYGMTTKAG  236 (345)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCSS-----SCCEEECCCTTCEEGGGTTCC--------------CC
T ss_pred             HHHHHHHHHHHHHHHHHHHCCccccCCChhhEEEecCC-----CceEEEeeccccccccccCcc------ccccccccCC
Confidence            88899999999999999999999999999999998663     247999999999866432211      0111233469


Q ss_pred             CCcccchhhhhcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCcchHHhhhccCcccccccc
Q 003185          707 TPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQS  786 (840)
Q Consensus       707 T~~YmAPEvL~~~~~~~~~s~kSDVWSLGvIL~ELLTG~~PF~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~  786 (840)
                      |+.|+|||++.+.  ...++.++|||||||+||||++|+.||.+....+....+..........                
T Consensus       237 t~~y~aPE~~~~~--~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~----------------  298 (345)
T 3hko_A          237 TPYFVAPEVLNTT--NESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKLCFENP----------------  298 (345)
T ss_dssp             CGGGCCHHHHTCS--SSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCTTSG----------------
T ss_pred             CccccCchhhccC--CCCCCcHHHHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHhcccccCCc----------------
Confidence            9999999999742  2567899999999999999999999999988888777776653321111                


Q ss_pred             CCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHHHh
Q 003185          787 GSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAGDLYEMFVA  830 (840)
Q Consensus       787 ~~~~~~~~~~~~~s~~L~dLI~rCL~~DP~eRPSa~ELLehLe~  830 (840)
                              .....++.+.+||.+||..||.+|||+.++++|.+-
T Consensus       299 --------~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~hp~~  334 (345)
T 3hko_A          299 --------NYNVLSPLARDLLSNLLNRNVDERFDAMRALQHPWI  334 (345)
T ss_dssp             --------GGGGSCHHHHHHHHHHSCSCTTTSCCHHHHHHSHHH
T ss_pred             --------ccccCCHHHHHHHHHHcCCChhHCCCHHHHhcChhh
Confidence                    112235679999999999999999999999998653


No 97 
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00  E-value=9.2e-41  Score=358.57  Aligned_cols=272  Identities=22%  Similarity=0.337  Sum_probs=207.7

Q ss_pred             CCCCCceeeeeecccCceEEEEEEEC-----CeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeE
Q 003185          502 GSFPSLSSCDEAGKSVSSSLFRCKFG-----SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGH  576 (840)
Q Consensus       502 ~~~~~y~i~~~LG~G~fG~Vy~a~~~-----~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~l~g~  576 (840)
                      ...++|.+.+.||+|+||.||+|.+.     +..+|+|++...  .......+.    +.+|+.++++++||||++++++
T Consensus        31 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~----~~~e~~~l~~l~h~~iv~~~~~  104 (313)
T 3brb_A           31 IDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLD--NSSQREIEE----FLSEAACMKDFSHPNVIRLLGV  104 (313)
T ss_dssp             CCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC-----CCCHHHHHH----HHHHHHHHHTCCCTTBCCCCEE
T ss_pred             cCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEecc--ccchhHHHH----HHHHHHHHhcCCCCCeeeeeEE
Confidence            34578999999999999999999863     337888885433  233333344    4899999999999999999999


Q ss_pred             EecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhc-cCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCC
Q 003185          577 KISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSE-TGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKS  655 (840)
Q Consensus       577 ~~~~~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~-~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKP  655 (840)
                      +......         .....++||||+++++|.+++..... .....+++..++.++.||+.||.|||++||+||||||
T Consensus       105 ~~~~~~~---------~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp  175 (313)
T 3brb_A          105 CIEMSSQ---------GIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRNFLHRDLAA  175 (313)
T ss_dssp             EEC----------------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCSG
T ss_pred             Eeecccc---------CCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCc
Confidence            9865421         22346999999999999999965221 2345699999999999999999999999999999999


Q ss_pred             CcEEEecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHH
Q 003185          656 ENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYG  735 (840)
Q Consensus       656 eNILLd~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLG  735 (840)
                      +|||++.+       +.+||+|||++.........        .......+++.|+|||++.+    ..++.++||||||
T Consensus       176 ~NIli~~~-------~~~kl~Dfg~~~~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~----~~~~~~~Di~slG  236 (313)
T 3brb_A          176 RNCMLRDD-------MTVCVADFGLSKKIYSGDYY--------RQGRIAKMPVKWIAIESLAD----RVYTSKSDVWAFG  236 (313)
T ss_dssp             GGEEECTT-------SCEEECSCSCC------------------------CCGGGSCHHHHHS----SCCCHHHHHHHHH
T ss_pred             ceEEEcCC-------CcEEEeecCcceeccccccc--------CcccccCCCccccCchhhcC----CCccchhhhHHHH
Confidence            99999877       46999999999866432211        01123457889999999986    6789999999999


Q ss_pred             HHHHHHHh-CCCCCCCCCHHHHHHHHHcCCCCCcchHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccC
Q 003185          736 CLLLELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEEN  814 (840)
Q Consensus       736 vIL~ELLT-G~~PF~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L~dLI~rCL~~D  814 (840)
                      |++|+|++ |..||.+....++...+..+..+..+.                           ..+..+.+||.+||..|
T Consensus       237 ~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~l~~li~~~l~~d  289 (313)
T 3brb_A          237 VTMWEIATRGMTPYPGVQNHEMYDYLLHGHRLKQPE---------------------------DCLDELYEIMYSCWRTD  289 (313)
T ss_dssp             HHHHHHHTTSCCSSTTCCGGGHHHHHHTTCCCCCBT---------------------------TCCHHHHHHHHHTTCSS
T ss_pred             HHHHHHHhcCCCCCccCCHHHHHHHHHcCCCCCCCc---------------------------cccHHHHHHHHHHcCCC
Confidence            99999999 999999888887777777665443332                           12457999999999999


Q ss_pred             CCCCCCHHHHHHHHHhhcCC
Q 003185          815 PTERPTAGDLYEMFVARTSS  834 (840)
Q Consensus       815 P~eRPSa~ELLehLe~l~~~  834 (840)
                      |.+|||+.+|+++|+.+...
T Consensus       290 p~~Rps~~~l~~~L~~l~~~  309 (313)
T 3brb_A          290 PLDRPTFSVLRLQLEKLLES  309 (313)
T ss_dssp             GGGSCCHHHHHHHHHHHHHH
T ss_pred             hhhCcCHHHHHHHHHHHHHh
Confidence            99999999999999998654


No 98 
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00  E-value=1.1e-40  Score=356.49  Aligned_cols=268  Identities=24%  Similarity=0.365  Sum_probs=210.9

Q ss_pred             CCCCCceeeeeecccCceEEEEEEE-------CCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhC-CCCCccee
Q 003185          502 GSFPSLSSCDEAGKSVSSSLFRCKF-------GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEM  573 (840)
Q Consensus       502 ~~~~~y~i~~~LG~G~fG~Vy~a~~-------~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L-~HpNIV~l  573 (840)
                      ...++|++.+.||+|+||.||+|.+       .+..+|+|+....   ......+    .+.+|+.+++++ +||||+++
T Consensus        20 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~----~~~~E~~~l~~l~~h~~i~~~   92 (313)
T 1t46_A           20 FPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPS---AHLTERE----ALMSELKVLSYLGNHMNIVNL   92 (313)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTT---CCHHHHH----HHHHHHHHHHHHCCCTTBCCE
T ss_pred             cChhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcc---hhHHHHH----HHHHHHHHHhhcccCCCeeeE
Confidence            4557899999999999999999985       3468999986532   1222333    448999999999 89999999


Q ss_pred             eeEEecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhc-------------cCCCCCCHHHHHHHHHHHHHHH
Q 003185          574 YGHKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSE-------------TGEKHVSVKLALFIAQDVAAAL  640 (840)
Q Consensus       574 ~g~~~~~~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~-------------~~~~~ls~~~~~~Ia~QIa~AL  640 (840)
                      ++++......              ++||||+++|+|.+++.....             .....+++..++.++.||+.||
T Consensus        93 ~~~~~~~~~~--------------~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l  158 (313)
T 1t46_A           93 LGACTIGGPT--------------LVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGM  158 (313)
T ss_dssp             EEEECSSSSC--------------EEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHH
T ss_pred             EEEEecCCCc--------------EEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHH
Confidence            9999866543              999999999999999986321             1123589999999999999999


Q ss_pred             HHHHhCCeecccCCCCcEEEecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhccc
Q 003185          641 VELHSKHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMH  720 (840)
Q Consensus       641 ~yLHs~gIVHRDLKPeNILLd~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~  720 (840)
                      .|||++||+||||||+|||++.+       +.+||+|||++..........        ......||+.|+|||++.+  
T Consensus       159 ~~lH~~~i~H~dlkp~Nil~~~~-------~~~kl~Dfg~~~~~~~~~~~~--------~~~~~~~~~~y~aPE~~~~--  221 (313)
T 1t46_A          159 AFLASKNCIHRDLAARNILLTHG-------RITKICDFGLARDIKNDSNYV--------VKGNARLPVKWMAPESIFN--  221 (313)
T ss_dssp             HHHHHTTCCCSCCSGGGEEEETT-------TEEEECCCGGGSCTTSCTTSE--------ECSSSEECGGGCCHHHHHH--
T ss_pred             HHHHHCCeecCCCccceEEEcCC-------CCEEEccccccccccccccce--------eccCCCCcceeeChHHhcC--
Confidence            99999999999999999999877       569999999998765432110        1123457889999999986  


Q ss_pred             CCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHH-HHHHHHcCCCCCcchHHhhhccCccccccccCCCCCCchhhhh
Q 003185          721 KPNLYGLEVDIWSYGCLLLELLT-LQVPYMGLSELE-IHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELE  798 (840)
Q Consensus       721 ~~~~~s~kSDVWSLGvIL~ELLT-G~~PF~~~~~~e-l~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~  798 (840)
                        ..++.++|||||||++|+|+| |..||.+..... ....+.....+..+                           ..
T Consensus       222 --~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~  272 (313)
T 1t46_A          222 --CVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSP---------------------------EH  272 (313)
T ss_dssp             --CCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHHHHHHHHHTCCCCCC---------------------------TT
T ss_pred             --CCCChHHHHHHHHHHHHHHHhCCCCCCCcccchhHHHHHhccCCCCCCc---------------------------cc
Confidence              678999999999999999999 999998765443 33333333222111                           11


Q ss_pred             hHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhcCCCC
Q 003185          799 TLSFLVDVFRRCTEENPTERPTAGDLYEMFVARTSSSI  836 (840)
Q Consensus       799 ~s~~L~dLI~rCL~~DP~eRPSa~ELLehLe~l~~~~~  836 (840)
                      .+..+.+||.+||..||.+|||+.+|+++|+.+.....
T Consensus       273 ~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~  310 (313)
T 1t46_A          273 APAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISEST  310 (313)
T ss_dssp             SCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTC
T ss_pred             CCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHhh
Confidence            24578999999999999999999999999998876543


No 99 
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00  E-value=9.2e-41  Score=353.41  Aligned_cols=259  Identities=22%  Similarity=0.375  Sum_probs=214.1

Q ss_pred             CCCCCceeeeeecccCceEEEEEEEC--CeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeEEec
Q 003185          502 GSFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKIS  579 (840)
Q Consensus       502 ~~~~~y~i~~~LG~G~fG~Vy~a~~~--~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~l~g~~~~  579 (840)
                      ...++|++.+.||+|+||.||+|.+.  +..+|+|++...     ....+.    +.+|+.++++++||||+++++++..
T Consensus        10 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-----~~~~~~----~~~E~~~l~~l~h~~i~~~~~~~~~   80 (288)
T 3kfa_A           10 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-----TMEVEE----FLKEAAVMKEIKHPNLVQLLGVCTR   80 (288)
T ss_dssp             CCGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSC-----STHHHH----HHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred             ccccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcC-----HHHHHH----HHHHHHHHHhCCCCCEeeEEEEEcc
Confidence            45678999999999999999999985  678899986432     122333    4899999999999999999999876


Q ss_pred             CCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCCCcEE
Q 003185          580 SKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENIL  659 (840)
Q Consensus       580 ~~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKPeNIL  659 (840)
                      ...              .++||||+++++|.+++..   .....+++..++.++.||+.||.|||++||+||||||+|||
T Consensus        81 ~~~--------------~~~v~e~~~~~~L~~~~~~---~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil  143 (288)
T 3kfa_A           81 EPP--------------FYIITEFMTYGNLLDYLRE---CNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCL  143 (288)
T ss_dssp             SSS--------------EEEEEECCTTEEHHHHHHH---CCTTTSCHHHHHHHHHHHHHHHHHHHHHTCCCSCCSGGGEE
T ss_pred             CCC--------------EEEEEEcCCCCcHHHHHHh---cccCCccHhHHHHHHHHHHHHHHHHHHCCccCCCCCcceEE
Confidence            553              4999999999999999976   33456899999999999999999999999999999999999


Q ss_pred             EecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHHHHHH
Q 003185          660 IDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLL  739 (840)
Q Consensus       660 Ld~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLGvIL~  739 (840)
                      ++.+       +.+||+|||++..........         .....+|+.|+|||++.+    ..++.++||||||+++|
T Consensus       144 ~~~~-------~~~~l~Dfg~~~~~~~~~~~~---------~~~~~~~~~y~aPE~~~~----~~~~~~~Di~slG~il~  203 (288)
T 3kfa_A          144 VGEN-------HLVKVADFGLSRLMTGDTYTA---------HAGAKFPIKWTAPESLAY----NKFSIKSDVWAFGVLLW  203 (288)
T ss_dssp             ECGG-------GCEEECCCCGGGTSCSSSSEE---------ETTEEECGGGCCHHHHHH----CCCCHHHHHHHHHHHHH
T ss_pred             EcCC-------CCEEEccCccceeccCCcccc---------ccCCccccCcCChhhhcc----CCCCchhhHHHHHHHHH
Confidence            9877       459999999998665332111         122357889999999987    56899999999999999


Q ss_pred             HHHh-CCCCCCCCCHHHHHHHHHcCCCCCcchHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCC
Q 003185          740 ELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTER  818 (840)
Q Consensus       740 ELLT-G~~PF~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L~dLI~rCL~~DP~eR  818 (840)
                      +|++ |..||.+.+..++...+.....+..+.                           ..++.+.+||.+||..||.+|
T Consensus       204 ~ll~~g~~p~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~l~~li~~~l~~dp~~R  256 (288)
T 3kfa_A          204 EIATYGMSPYPGIDLSQVYELLEKDYRMERPE---------------------------GCPEKVYELMRACWQWNPSDR  256 (288)
T ss_dssp             HHHTTSCCSSTTCCGGGHHHHHHTTCCCCCCT---------------------------TCCHHHHHHHHHHTCSSGGGS
T ss_pred             HHHhCCCCCCCCCCHHHHHHHHhccCCCCCCC---------------------------CCCHHHHHHHHHHhCCChhhC
Confidence            9999 999999888877777776654433221                           124579999999999999999


Q ss_pred             CCHHHHHHHHHhhcC
Q 003185          819 PTAGDLYEMFVARTS  833 (840)
Q Consensus       819 PSa~ELLehLe~l~~  833 (840)
                      ||+.++++.|+.+..
T Consensus       257 ps~~~~~~~l~~~~~  271 (288)
T 3kfa_A          257 PSFAEIHQAFETMFQ  271 (288)
T ss_dssp             CCHHHHHHHHHHHHH
T ss_pred             cCHHHHHHHHHHHHH
Confidence            999999999988754


No 100
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00  E-value=4.1e-41  Score=370.03  Aligned_cols=257  Identities=24%  Similarity=0.253  Sum_probs=206.4

Q ss_pred             CCCCceeeeeecccCceEEEEEEE--CCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhC-CCCCcceeeeEEec
Q 003185          503 SFPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEMYGHKIS  579 (840)
Q Consensus       503 ~~~~y~i~~~LG~G~fG~Vy~a~~--~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L-~HpNIV~l~g~~~~  579 (840)
                      ..++|++.+.||+|+||.||+|.+  .+..+|+|++.....        ..    .+|+.++.++ +||||+++++++..
T Consensus        20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~--------~~----~~E~~~l~~~~~hp~iv~~~~~~~~   87 (342)
T 2qr7_A           20 FTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR--------DP----TEEIEILLRYGQHPNIITLKDVYDD   87 (342)
T ss_dssp             HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC--------CC----HHHHHHHHHHTTSTTBCCEEEEEEC
T ss_pred             ccccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC--------Ch----HHHHHHHHHhcCCCCcCeEEEEEEc
Confidence            356799999999999999999998  478899999753321        12    5688888888 69999999999986


Q ss_pred             CCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCCCcEE
Q 003185          580 SKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENIL  659 (840)
Q Consensus       580 ~~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKPeNIL  659 (840)
                      ..              ..||||||++||+|.+++..     ...+++..++.++.||+.||.|||++||+||||||+|||
T Consensus        88 ~~--------------~~~lv~E~~~gg~L~~~i~~-----~~~~~~~~~~~~~~qi~~al~~lH~~givHrDlkp~NIl  148 (342)
T 2qr7_A           88 GK--------------YVYVVTELMKGGELLDKILR-----QKFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNIL  148 (342)
T ss_dssp             SS--------------EEEEEECCCCSCBHHHHHHT-----CTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEE
T ss_pred             CC--------------EEEEEEeCCCCCcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCCcEeccCCHHHEE
Confidence            55              35999999999999999975     356999999999999999999999999999999999999


Q ss_pred             EecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHHHHHH
Q 003185          660 IDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLL  739 (840)
Q Consensus       660 Ld~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLGvIL~  739 (840)
                      +.....   ....+||+|||+++........          .....||+.|+|||++.+    ..++.++|||||||++|
T Consensus       149 ~~~~~~---~~~~~kl~Dfg~a~~~~~~~~~----------~~~~~gt~~y~aPE~~~~----~~~~~~~DiwslG~il~  211 (342)
T 2qr7_A          149 YVDESG---NPESIRICDFGFAKQLRAENGL----------LMTPCYTANFVAPEVLER----QGYDAACDIWSLGVLLY  211 (342)
T ss_dssp             ESSSSC---SGGGEEECCCTTCEECBCTTCC----------BCCSSCCSSCCCHHHHHH----HHHHHHHHHHHHHHHHH
T ss_pred             EecCCC---CcCeEEEEECCCcccCcCCCCc----------eeccCCCccccCHHHhcC----CCCCCccCeeeHhHHHH
Confidence            965421   2246999999999866432211          123468999999999986    45788999999999999


Q ss_pred             HHHhCCCCCCC---CCHHHHHHHHHcCCCCCcchHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCC
Q 003185          740 ELLTLQVPYMG---LSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPT  816 (840)
Q Consensus       740 ELLTG~~PF~~---~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L~dLI~rCL~~DP~  816 (840)
                      +|++|..||.+   ....++...+..+.......                        .....++.+.+||.+||..||.
T Consensus       212 ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~------------------------~~~~~s~~~~~li~~~L~~dP~  267 (342)
T 2qr7_A          212 TMLTGYTPFANGPDDTPEEILARIGSGKFSLSGG------------------------YWNSVSDTAKDLVSKMLHVDPH  267 (342)
T ss_dssp             HHHHSSCSSCSSTTSCHHHHHHHHHHCCCCCCST------------------------TTTTSCHHHHHHHHHHTCSSTT
T ss_pred             HHhcCCCCCCCCCcCCHHHHHHHHccCCcccCcc------------------------ccccCCHHHHHHHHHHCCCChh
Confidence            99999999975   35666777776654321111                        1112356799999999999999


Q ss_pred             CCCCHHHHHHHHHhh
Q 003185          817 ERPTAGDLYEMFVAR  831 (840)
Q Consensus       817 eRPSa~ELLehLe~l  831 (840)
                      +|||+.++++|.+-.
T Consensus       268 ~R~t~~~il~hp~~~  282 (342)
T 2qr7_A          268 QRLTAALVLRHPWIV  282 (342)
T ss_dssp             TSCCHHHHTTSHHHH
T ss_pred             HCcCHHHHhcCCeec
Confidence            999999999997653


No 101
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00  E-value=5.2e-41  Score=353.94  Aligned_cols=255  Identities=24%  Similarity=0.300  Sum_probs=189.6

Q ss_pred             CCCCCceeeeeecccCceEEEEEEE--CCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeEEec
Q 003185          502 GSFPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKIS  579 (840)
Q Consensus       502 ~~~~~y~i~~~LG~G~fG~Vy~a~~--~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~l~g~~~~  579 (840)
                      ..+++|++.+.||+|+||.||+|.+  .+..+|+|++.......     ......+.+|+.+++.++||||+++++++..
T Consensus        10 ~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~-----~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~   84 (275)
T 2eue_A           10 AHIGNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAK-----SDMQGRIEREISYLRLLRHPHIIKLYDVIKS   84 (275)
T ss_dssp             CBCCCBCCCC---------EEEEECTTTCCEEEEEEECSCC----------CHHHHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred             CcccceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcch-----HHHHHHHHHHHHHHHhCCCCCeEEEEEEEec
Confidence            5688999999999999999999986  67899999975432211     1223345899999999999999999999986


Q ss_pred             CCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCCCcEE
Q 003185          580 SKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENIL  659 (840)
Q Consensus       580 ~~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKPeNIL  659 (840)
                      ...              .++||||+ +++|.+++..     ...+++..++.++.||+.||.|||++||+||||||+|||
T Consensus        85 ~~~--------------~~lv~e~~-~~~l~~~~~~-----~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dikp~Nil  144 (275)
T 2eue_A           85 KDE--------------IIMVIEYA-GNELFDYIVQ-----RDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLL  144 (275)
T ss_dssp             SSC--------------EEEEEECC-CEEHHHHHHT-----SSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEE
T ss_pred             CCe--------------EEEEehhc-CCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCChHhEE
Confidence            553              49999999 5789888875     356999999999999999999999999999999999999


Q ss_pred             EecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHHHHHH
Q 003185          660 IDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLL  739 (840)
Q Consensus       660 Ld~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLGvIL~  739 (840)
                      ++.+       +.+||+|||++........           .....||+.|+|||++.+   ....+.++|||||||++|
T Consensus       145 ~~~~-------~~~kl~Dfg~~~~~~~~~~-----------~~~~~~t~~y~aPE~~~~---~~~~~~~~Di~slG~il~  203 (275)
T 2eue_A          145 LDEH-------LNVKIADFGLSNIMTDGNF-----------LKTSCGSPNYAAPEVISG---KLYAGPEVDVWSCGVILY  203 (275)
T ss_dssp             ECTT-------SCEEECCSSCC--------------------------CTTCCHHHHCC--------THHHHHHHHHHHH
T ss_pred             ECCC-------CCEEEeecccceeccCccc-----------ccCCCCCcCcCCceeeeC---CCCCCcccchHHHHHHHH
Confidence            9877       4599999999976543221           122458999999999975   223478999999999999


Q ss_pred             HHHhCCCCCCCCCHHHHHHHHHcCCCCCcchHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC
Q 003185          740 ELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP  819 (840)
Q Consensus       740 ELLTG~~PF~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L~dLI~rCL~~DP~eRP  819 (840)
                      +|++|+.||.+.........+.....+ ++.                           ..+..+.+||.+||+.||.+||
T Consensus       204 ~l~~g~~pf~~~~~~~~~~~~~~~~~~-~~~---------------------------~~~~~~~~li~~~l~~dP~~Rp  255 (275)
T 2eue_A          204 VMLCRRLPFDDESIPVLFKNISNGVYT-LPK---------------------------FLSPGAAGLIKRMLIVNPLNRI  255 (275)
T ss_dssp             HHHHSSCSSCCSSHHHHHHHHHHTCCC-CCT---------------------------TSCHHHHHHHHHHSCSSGGGSC
T ss_pred             HHHhCCCCCCCCCHHHHHHHHHhCCCC-CCc---------------------------cCCHHHHHHHHHHhhcCHhHCC
Confidence            999999999998888777777665321 111                           1245789999999999999999


Q ss_pred             CHHHHHHHHHh
Q 003185          820 TAGDLYEMFVA  830 (840)
Q Consensus       820 Sa~ELLehLe~  830 (840)
                      |+.|+++|.+-
T Consensus       256 s~~e~l~h~~f  266 (275)
T 2eue_A          256 SIHEIMQDDWF  266 (275)
T ss_dssp             CHHHHTTCHHH
T ss_pred             CHHHHhhCCee
Confidence            99999998653


No 102
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00  E-value=3.9e-41  Score=374.17  Aligned_cols=263  Identities=21%  Similarity=0.343  Sum_probs=202.0

Q ss_pred             CCCCCceeeeeecccCceEEEEEEEC-----CeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeE
Q 003185          502 GSFPSLSSCDEAGKSVSSSLFRCKFG-----SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGH  576 (840)
Q Consensus       502 ~~~~~y~i~~~LG~G~fG~Vy~a~~~-----~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~l~g~  576 (840)
                      ....+|.+.+.||+|+||.||+|++.     +..||+|+....   ......+    .+.+|+.+|++++||||++++++
T Consensus        42 ~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~---~~~~~~~----~~~~E~~~l~~l~h~niv~~~~~  114 (373)
T 2qol_A           42 LDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVG---YTEKQRR----DFLGEASIMGQFDHPNIIRLEGV  114 (373)
T ss_dssp             CCGGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTT---CCHHHHH----HHHHHHHHHTTCCCTTBCCEEEE
T ss_pred             cCHhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCc---cCHHHHH----HHHHHHHHHHhCCCCCCCeEEEE
Confidence            45568999999999999999999863     567999985432   1223333    44999999999999999999999


Q ss_pred             EecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCCC
Q 003185          577 KISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSE  656 (840)
Q Consensus       577 ~~~~~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKPe  656 (840)
                      +......              +|||||+++|+|.+++..    ....+++..++.++.||+.||.|||++||+||||||+
T Consensus       115 ~~~~~~~--------------~lv~e~~~~~sL~~~l~~----~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~  176 (373)
T 2qol_A          115 VTKSKPV--------------MIVTEYMENGSLDSFLRK----HDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAAR  176 (373)
T ss_dssp             ECSSSSC--------------EEEEECCTTCBHHHHHHT----TTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGG
T ss_pred             EeeCCce--------------EEEEeCCCCCcHHHHHHh----CCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcc
Confidence            9866543              999999999999999975    2346899999999999999999999999999999999


Q ss_pred             cEEEecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHHH
Q 003185          657 NILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGC  736 (840)
Q Consensus       657 NILLd~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLGv  736 (840)
                      |||++.+       +.+||+|||+++..........       ......+|+.|+|||++.+    ..++.++|||||||
T Consensus       177 NIll~~~-------~~~kl~Dfg~a~~~~~~~~~~~-------~~~~~~~~~~y~aPE~~~~----~~~~~~~Dv~SlG~  238 (373)
T 2qol_A          177 NILINSN-------LVCKVSDFGLGRVLEDDPEAAY-------TTRGGKIPIRWTSPEAIAY----RKFTSASDVWSYGI  238 (373)
T ss_dssp             GEEECTT-------CCEEECCC-----------------------------CTTSCHHHHHH----CCCCHHHHHHHHHH
T ss_pred             eEEEcCC-------CCEEECcCccccccccCCccce-------eccCCCcCCCccChhhhcc----CCcCchhcHHHHHH
Confidence            9999877       5699999999987654221100       0112235788999999987    67899999999999


Q ss_pred             HHHHHHh-CCCCCCCCCHHHHHHHHHcCCCCCcchHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCC
Q 003185          737 LLLELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENP  815 (840)
Q Consensus       737 IL~ELLT-G~~PF~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L~dLI~rCL~~DP  815 (840)
                      +||||++ |..||...+..++...+..+.....+                           ...+..+.+||.+||+.||
T Consensus       239 il~ellt~g~~P~~~~~~~~~~~~i~~~~~~~~~---------------------------~~~~~~l~~li~~cl~~dp  291 (373)
T 2qol_A          239 VLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPP---------------------------MDCPAALYQLMLDCWQKDR  291 (373)
T ss_dssp             HHHHHHTTC-CTTTTCCHHHHHHHHHTTEECCCC---------------------------TTCBHHHHHHHHHHTCSSG
T ss_pred             HHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCC---------------------------ccccHHHHHHHHHHhCcCh
Confidence            9999998 99999998888888777665332221                           1234578999999999999


Q ss_pred             CCCCCHHHHHHHHHhhcCC
Q 003185          816 TERPTAGDLYEMFVARTSS  834 (840)
Q Consensus       816 ~eRPSa~ELLehLe~l~~~  834 (840)
                      .+||++.+|++.|+.+...
T Consensus       292 ~~RPs~~~i~~~L~~~~~~  310 (373)
T 2qol_A          292 NNRPKFEQIVSILDKLIRN  310 (373)
T ss_dssp             GGSCCHHHHHHHHHHHHHC
T ss_pred             hhCcCHHHHHHHHHHHHhC
Confidence            9999999999999987543


No 103
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00  E-value=1.5e-40  Score=350.87  Aligned_cols=261  Identities=24%  Similarity=0.309  Sum_probs=208.5

Q ss_pred             CCceeeeeecccCceEEEEEEE--CCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeEEecCCC
Q 003185          505 PSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW  582 (840)
Q Consensus       505 ~~y~i~~~LG~G~fG~Vy~a~~--~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~l~g~~~~~~~  582 (840)
                      ++|++.+.||+|+||.||+|.+  .+..+|+|++..........  ....+.+.+|+.++++++||||+++++++.... 
T Consensus         5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~--~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-   81 (283)
T 3bhy_A            5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRR--GVSREEIEREVNILREIRHPNIITLHDIFENKT-   81 (283)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSS--SBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS-
T ss_pred             hhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhcccccccc--chHHHHHHHHHHHHHhCCCCCeeehhheecCCC-
Confidence            4699999999999999999998  47899999976543322111  011234489999999999999999999998654 


Q ss_pred             CCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCCCcEEEec
Q 003185          583 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL  662 (840)
Q Consensus       583 ~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKPeNILLd~  662 (840)
                                   ..++||||+++++|.+++..     ...+++..++.++.||+.||.|||++||+||||||+|||++.
T Consensus        82 -------------~~~lv~e~~~~~~L~~~l~~-----~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~  143 (283)
T 3bhy_A           82 -------------DVVLILELVSGGELFDFLAE-----KESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLD  143 (283)
T ss_dssp             -------------EEEEEEECCCSCBHHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESC
T ss_pred             -------------eEEEEEeecCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChHHEEEec
Confidence                         35999999999999999976     246899999999999999999999999999999999999987


Q ss_pred             ccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHHHHHHHHH
Q 003185          663 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL  742 (840)
Q Consensus       663 ~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLGvIL~ELL  742 (840)
                      ++.   ....+||+|||++........           .....||+.|+|||++.+    ..++.++||||||+++|+|+
T Consensus       144 ~~~---~~~~~kl~dfg~~~~~~~~~~-----------~~~~~~~~~y~aPE~~~~----~~~~~~~Di~slG~il~~l~  205 (283)
T 3bhy_A          144 KNV---PNPRIKLIDFGIAHKIEAGNE-----------FKNIFGTPEFVAPEIVNY----EPLGLEADMWSIGVITYILL  205 (283)
T ss_dssp             SSS---SSCCEEECCCTTCEECC-------------------CCCGGGCCHHHHTT----CCCCTHHHHHHHHHHHHHHH
T ss_pred             CCC---CCCceEEEecccceeccCCCc-----------ccccCCCcCccCcceecC----CCCCcchhhhhHHHHHHHHH
Confidence            632   224699999999986543211           123468999999999976    66889999999999999999


Q ss_pred             hCCCCCCCCCHHHHHHHHHcCCCCCcchHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHH
Q 003185          743 TLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAG  822 (840)
Q Consensus       743 TG~~PF~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L~dLI~rCL~~DP~eRPSa~  822 (840)
                      +|..||.+....+....+...........                        ....+..+.+||.+||..||.+|||+.
T Consensus       206 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~li~~~l~~dp~~Rps~~  261 (283)
T 3bhy_A          206 SGASPFLGETKQETLTNISAVNYDFDEEY------------------------FSNTSELAKDFIRRLLVKDPKRRMTIA  261 (283)
T ss_dssp             HSSCTTCCSSHHHHHHHHHTTCCCCCHHH------------------------HTTCCHHHHHHHHTTSCSSGGGSCCHH
T ss_pred             HCCCCCCCcchHHHHHHhHhcccCCcchh------------------------cccCCHHHHHHHHHHccCCHhHCcCHH
Confidence            99999999888877777765533221111                        122355789999999999999999999


Q ss_pred             HHHHHH
Q 003185          823 DLYEMF  828 (840)
Q Consensus       823 ELLehL  828 (840)
                      ++++|.
T Consensus       262 ~~l~h~  267 (283)
T 3bhy_A          262 QSLEHS  267 (283)
T ss_dssp             HHHHCH
T ss_pred             HHHhCH
Confidence            999974


No 104
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00  E-value=1e-40  Score=371.04  Aligned_cols=253  Identities=20%  Similarity=0.305  Sum_probs=201.2

Q ss_pred             ceeeeeecccCceEEEEEEE--CCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeEEecCCCCC
Q 003185          507 LSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWLP  584 (840)
Q Consensus       507 y~i~~~LG~G~fG~Vy~a~~--~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~l~g~~~~~~~~p  584 (840)
                      |...+.||+|+||.||+|.+  .+..||+|++....    ....+    .+.+|+.+|++|+||||+++++++....   
T Consensus        91 ~~~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~----~~~~~----~~~~E~~~l~~l~hpnIv~~~~~~~~~~---  159 (373)
T 2x4f_A           91 VSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRG----MKDKE----EVKNEISVMNQLDHANLIQLYDAFESKN---  159 (373)
T ss_dssp             EEEEEECC-----CEEEEEETTTCCEEEEEEEECCS----HHHHH----HHHHHHHHHTTCCCTTBCCEEEEEECSS---
T ss_pred             eecceEEecCcCEEEEEEEEcCCCcEEEEEEEcccc----cccHH----HHHHHHHHHHhCCCCCCCeEEEEEEECC---
Confidence            34477899999999999997  57889999975431    22233    3489999999999999999999998655   


Q ss_pred             CCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCCCcEEEeccc
Q 003185          585 SADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLER  664 (840)
Q Consensus       585 ~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKPeNILLd~~~  664 (840)
                                 ..+|||||+++++|.+++..    ....+++..++.++.||+.||.|||++||+||||||+|||+..+.
T Consensus       160 -----------~~~lv~E~~~~~~L~~~l~~----~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~  224 (373)
T 2x4f_A          160 -----------DIVLVMEYVDGGELFDRIID----ESYNLTELDTILFMKQICEGIRHMHQMYILHLDLKPENILCVNRD  224 (373)
T ss_dssp             -----------EEEEEEECCTTCEEHHHHHH----TGGGCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEETT
T ss_pred             -----------EEEEEEeCCCCCcHHHHHHh----cCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEecCC
Confidence                       35999999999999999875    234689999999999999999999999999999999999996442


Q ss_pred             ccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHHHHHHHHHhC
Q 003185          665 KKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLTL  744 (840)
Q Consensus       665 ~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLGvIL~ELLTG  744 (840)
                           .+.+||+|||+++.+.....           .....||+.|+|||++.+    ..++.++|||||||+||||++|
T Consensus       225 -----~~~~kl~DFG~a~~~~~~~~-----------~~~~~gt~~y~aPE~~~~----~~~~~~~DiwslG~il~elltg  284 (373)
T 2x4f_A          225 -----AKQIKIIDFGLARRYKPREK-----------LKVNFGTPEFLAPEVVNY----DFVSFPTDMWSVGVIAYMLLSG  284 (373)
T ss_dssp             -----TTEEEECCCSSCEECCTTCB-----------CCCCCSSCTTCCHHHHTT----CBCCHHHHHHHHHHHHHHHHHS
T ss_pred             -----CCcEEEEeCCCceecCCccc-----------cccccCCCcEeChhhccC----CCCCcHHhHHHHHHHHHHHHhC
Confidence                 26799999999987643221           123469999999999975    6789999999999999999999


Q ss_pred             CCCCCCCCHHHHHHHHHcCCCCCcchHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHHHH
Q 003185          745 QVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAGDL  824 (840)
Q Consensus       745 ~~PF~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L~dLI~rCL~~DP~eRPSa~EL  824 (840)
                      ..||.+.+..+....+..........                        .....++.+.+||.+||..||.+|||+.++
T Consensus       285 ~~pf~~~~~~~~~~~i~~~~~~~~~~------------------------~~~~~~~~~~~li~~~L~~dp~~Rps~~e~  340 (373)
T 2x4f_A          285 LSPFLGDNDAETLNNILACRWDLEDE------------------------EFQDISEEAKEFISKLLIKEKSWRISASEA  340 (373)
T ss_dssp             SCTTCCSSHHHHHHHHHHTCCCSCSG------------------------GGTTSCHHHHHHHHTTSCSSGGGSCCHHHH
T ss_pred             CCCCCCCCHHHHHHHHHhccCCCChh------------------------hhccCCHHHHHHHHHHcCCChhhCCCHHHH
Confidence            99999998888877776653321111                        112235689999999999999999999999


Q ss_pred             HHHHH
Q 003185          825 YEMFV  829 (840)
Q Consensus       825 LehLe  829 (840)
                      ++|..
T Consensus       341 l~hp~  345 (373)
T 2x4f_A          341 LKHPW  345 (373)
T ss_dssp             HHSHH
T ss_pred             hcCcC
Confidence            99854


No 105
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00  E-value=4.4e-41  Score=370.84  Aligned_cols=255  Identities=25%  Similarity=0.322  Sum_probs=208.3

Q ss_pred             CCCCCceeeeeecccCceEEEEEEE--CCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhC-CCCCcceeeeEEe
Q 003185          502 GSFPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEMYGHKI  578 (840)
Q Consensus       502 ~~~~~y~i~~~LG~G~fG~Vy~a~~--~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L-~HpNIV~l~g~~~  578 (840)
                      ..+++|.+.+.||+|+||.||+|++  .+..||+|+......     ........+..|..++..+ +||||+++++++.
T Consensus        14 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~-----~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~   88 (345)
T 1xjd_A           14 LKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVV-----LMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQ   88 (345)
T ss_dssp             --CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHH-----HHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEE
T ss_pred             CChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHh-----hhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEE
Confidence            5688999999999999999999998  478899999754311     0111123347899999877 8999999999998


Q ss_pred             cCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCCCcE
Q 003185          579 SSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENI  658 (840)
Q Consensus       579 ~~~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKPeNI  658 (840)
                      ....              .||||||++||+|.+++..     ...+++..++.++.||+.||+|||++||+||||||+||
T Consensus        89 ~~~~--------------~~lv~E~~~gg~L~~~l~~-----~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NI  149 (345)
T 1xjd_A           89 TKEN--------------LFFVMEYLNGGDLMYHIQS-----CHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNI  149 (345)
T ss_dssp             CSSE--------------EEEEEECCTTCBHHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGE
T ss_pred             eCCE--------------EEEEEeCCCCCcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCChhhE
Confidence            6653              5999999999999999986     25689999999999999999999999999999999999


Q ss_pred             EEecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHHHHH
Q 003185          659 LIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLL  738 (840)
Q Consensus       659 LLd~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLGvIL  738 (840)
                      |++.+       +.+||+|||+++.......          ......||+.|+|||++.+    ..++.++|||||||++
T Consensus       150 ll~~~-------g~vkL~DFG~a~~~~~~~~----------~~~~~~gt~~y~aPE~~~~----~~~~~~~DiwslG~il  208 (345)
T 1xjd_A          150 LLDKD-------GHIKIADFGMCKENMLGDA----------KTNTFCGTPDYIAPEILLG----QKYNHSVDWWSFGVLL  208 (345)
T ss_dssp             EECTT-------SCEEECCCTTCBCCCCTTC----------CBCCCCSCGGGCCHHHHTT----CCBCTHHHHHHHHHHH
T ss_pred             EECCC-------CCEEEeEChhhhhcccCCC----------cccCCCCCcccCChhhhcC----CCCCChhhhHHHHHHH
Confidence            99877       4699999999975432111          1234579999999999986    5689999999999999


Q ss_pred             HHHHhCCCCCCCCCHHHHHHHHHcCCCCCcchHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCC
Q 003185          739 LELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTER  818 (840)
Q Consensus       739 ~ELLTG~~PF~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L~dLI~rCL~~DP~eR  818 (840)
                      |||++|..||.+.+..++...+..... .++.                           ..+..+.+||.+||..||.+|
T Consensus       209 ~ell~g~~Pf~~~~~~~~~~~i~~~~~-~~p~---------------------------~~s~~~~~li~~lL~~dp~~R  260 (345)
T 1xjd_A          209 YEMLIGQSPFHGQDEEELFHSIRMDNP-FYPR---------------------------WLEKEAKDLLVKLFVREPEKR  260 (345)
T ss_dssp             HHHHHSSCSSCCSSHHHHHHHHHHCCC-CCCT---------------------------TSCHHHHHHHHHHSCSSGGGS
T ss_pred             HHHhcCCCCCCCCCHHHHHHHHHhCCC-CCCc---------------------------ccCHHHHHHHHHHhcCCHhHc
Confidence            999999999999988888888766532 2221                           124578999999999999999


Q ss_pred             CCHH-HHHHHHH
Q 003185          819 PTAG-DLYEMFV  829 (840)
Q Consensus       819 PSa~-ELLehLe  829 (840)
                      |++. +|++|..
T Consensus       261 ~~~~~~i~~hp~  272 (345)
T 1xjd_A          261 LGVRGDIRQHPL  272 (345)
T ss_dssp             BTTBSCGGGSGG
T ss_pred             CCChHHHHcCcc
Confidence            9998 8887744


No 106
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00  E-value=1.6e-40  Score=353.57  Aligned_cols=261  Identities=21%  Similarity=0.306  Sum_probs=210.2

Q ss_pred             CCCCCceeee-eecccCceEEEEEEE----CCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeE
Q 003185          502 GSFPSLSSCD-EAGKSVSSSLFRCKF----GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGH  576 (840)
Q Consensus       502 ~~~~~y~i~~-~LG~G~fG~Vy~a~~----~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~l~g~  576 (840)
                      ....+|.+.+ .||+|+||.||+|.+    .+..+|+|+.....  ....    ..+.+.+|+.+++.++||||++++++
T Consensus        13 ~~~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~--~~~~----~~~~~~~e~~~l~~l~h~~i~~~~~~   86 (291)
T 1xbb_A           13 LDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEA--NDPA----LKDELLAEANVMQQLDNPYIVRMIGI   86 (291)
T ss_dssp             CCGGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-------CH----HHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred             ecchhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccc--cCHH----HHHHHHHHHHHHHhCCCCCEEEEEEE
Confidence            3456899998 999999999999965    35679999865331  1112    22345899999999999999999999


Q ss_pred             EecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCCC
Q 003185          577 KISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSE  656 (840)
Q Consensus       577 ~~~~~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKPe  656 (840)
                      +...               ..++||||+++++|.+++..     ...+++..++.++.||+.||.|||++||+||||||+
T Consensus        87 ~~~~---------------~~~lv~e~~~~~~L~~~l~~-----~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~  146 (291)
T 1xbb_A           87 CEAE---------------SWMLVMEMAELGPLNKYLQQ-----NRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAAR  146 (291)
T ss_dssp             EESS---------------SEEEEEECCTTEEHHHHHHH-----CTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGG
T ss_pred             ECCC---------------CcEEEEEeCCCCCHHHHHHh-----CcCCCHHHHHHHHHHHHHHHHHHHhCCeEcCCCCcc
Confidence            8432               24999999999999999986     356899999999999999999999999999999999


Q ss_pred             cEEEecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHHH
Q 003185          657 NILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGC  736 (840)
Q Consensus       657 NILLd~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLGv  736 (840)
                      |||++.+       +.+||+|||++...........       ......+|+.|+|||++.+    ..++.++||||||+
T Consensus       147 Nil~~~~-------~~~kl~Dfg~~~~~~~~~~~~~-------~~~~~~~~~~y~aPE~~~~----~~~~~~~Di~slG~  208 (291)
T 1xbb_A          147 NVLLVTQ-------HYAKISDFGLSKALRADENYYK-------AQTHGKWPVKWYAPECINY----YKFSSKSDVWSFGV  208 (291)
T ss_dssp             GEEEEET-------TEEEECCCTTCEECCTTCSEEE-------C----CCCGGGCCHHHHHH----CEEEHHHHHHHHHH
T ss_pred             eEEEeCC-------CcEEEccCCcceeeccCCCccc-------ccccCCCCceeeChHHhcc----CCCChhhhHHHHHH
Confidence            9999977       4699999999987644322110       0122346789999999986    56789999999999


Q ss_pred             HHHHHHh-CCCCCCCCCHHHHHHHHHcCCCCCcchHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCC
Q 003185          737 LLLELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENP  815 (840)
Q Consensus       737 IL~ELLT-G~~PF~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L~dLI~rCL~~DP  815 (840)
                      ++|+|++ |..||.+....++...+..+..+.++.                           ..+..+.+||.+||..||
T Consensus       209 il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~l~~li~~~l~~dp  261 (291)
T 1xbb_A          209 LMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPA---------------------------GCPREMYDLMNLCWTYDV  261 (291)
T ss_dssp             HHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCCCT---------------------------TCCHHHHHHHHHHTCSST
T ss_pred             HHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCC---------------------------CCCHHHHHHHHHHcCCCh
Confidence            9999999 999999998888888877765443331                           124579999999999999


Q ss_pred             CCCCCHHHHHHHHHhhcC
Q 003185          816 TERPTAGDLYEMFVARTS  833 (840)
Q Consensus       816 ~eRPSa~ELLehLe~l~~  833 (840)
                      .+||++.+|++.|+.+..
T Consensus       262 ~~Rps~~~l~~~L~~~~~  279 (291)
T 1xbb_A          262 ENRPGFAAVELRLRNYYY  279 (291)
T ss_dssp             TTSCCHHHHHHHHHHHHH
T ss_pred             hhCcCHHHHHHHHHHHHH
Confidence            999999999999988753


No 107
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00  E-value=8.4e-41  Score=385.25  Aligned_cols=261  Identities=22%  Similarity=0.381  Sum_probs=215.5

Q ss_pred             CCCCCceeeeeecccCceEEEEEEEC--CeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeEEec
Q 003185          502 GSFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKIS  579 (840)
Q Consensus       502 ~~~~~y~i~~~LG~G~fG~Vy~a~~~--~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~l~g~~~~  579 (840)
                      +...+|++.+.||+|+||.||+|.+.  +..||+|++...  ..   ..+.    +.+|+.+|++++|||||++++++..
T Consensus       217 ~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~--~~---~~~~----~~~E~~~l~~l~hpniv~l~~~~~~  287 (495)
T 1opk_A          217 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED--TM---EVEE----FLKEAAVMKEIKHPNLVQLLGVCTR  287 (495)
T ss_dssp             CCGGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSS--SS---CHHH----HHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred             cCHHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCc--cc---chHH----HHHHHHHHHhcCCCCEeeEEEEEec
Confidence            34567999999999999999999985  678899985422  11   1233    4899999999999999999999986


Q ss_pred             CCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCCCcEE
Q 003185          580 SKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENIL  659 (840)
Q Consensus       580 ~~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKPeNIL  659 (840)
                      ...+              ||||||+++|+|.+++..   .....+++..++.|+.||+.||.|||++||+||||||+|||
T Consensus       288 ~~~~--------------~lv~E~~~~g~L~~~l~~---~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIl  350 (495)
T 1opk_A          288 EPPF--------------YIITEFMTYGNLLDYLRE---CNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCL  350 (495)
T ss_dssp             SSSC--------------EEEEECCTTCBHHHHHHH---SCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEE
T ss_pred             CCcE--------------EEEEEccCCCCHHHHHHh---cCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChhhEE
Confidence            6544              999999999999999986   23356899999999999999999999999999999999999


Q ss_pred             EecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHHHHHH
Q 003185          660 IDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLL  739 (840)
Q Consensus       660 Ld~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLGvIL~  739 (840)
                      |+.+       +.+||+|||+++........         ......+|+.|+|||++..    ..++.++|||||||+||
T Consensus       351 l~~~-------~~~kl~DFG~a~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~----~~~~~~sDvwSlG~~l~  410 (495)
T 1opk_A          351 VGEN-------HLVKVADFGLSRLMTGDTYT---------AHAGAKFPIKWTAPESLAY----NKFSIKSDVWAFGVLLW  410 (495)
T ss_dssp             ECGG-------GCEEECCTTCEECCTTCCEE---------CCTTCCCCGGGCCHHHHHH----CEECHHHHHHHHHHHHH
T ss_pred             ECCC-------CcEEEeecccceeccCCcee---------ecCCCcCCcceeCHhHHhc----CCCCcHHhHHhHHHHHH
Confidence            9877       46999999999876432211         0122346789999999986    56899999999999999


Q ss_pred             HHHh-CCCCCCCCCHHHHHHHHHcCCCCCcchHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCC
Q 003185          740 ELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTER  818 (840)
Q Consensus       740 ELLT-G~~PF~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L~dLI~rCL~~DP~eR  818 (840)
                      ||+| |..||.+.+..++...+....+...+.                           .+++.+.+||.+||+.||.+|
T Consensus       411 el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~l~~li~~cl~~dP~~R  463 (495)
T 1opk_A          411 EIATYGMSPYPGIDLSQVYELLEKDYRMERPE---------------------------GCPEKVYELMRACWQWNPSDR  463 (495)
T ss_dssp             HHHTTSCCSSTTCCGGGHHHHHHTTCCCCCCT---------------------------TCCHHHHHHHHHHTCSSGGGS
T ss_pred             HHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCC---------------------------CCCHHHHHHHHHHcCcChhHC
Confidence            9999 999999988888877777665433331                           124578999999999999999


Q ss_pred             CCHHHHHHHHHhhcCCC
Q 003185          819 PTAGDLYEMFVARTSSS  835 (840)
Q Consensus       819 PSa~ELLehLe~l~~~~  835 (840)
                      ||+.+|++.|+.+....
T Consensus       464 Ps~~el~~~L~~~~~~~  480 (495)
T 1opk_A          464 PSFAEIHQAFETMFQES  480 (495)
T ss_dssp             CCHHHHHHHHHTSCSSS
T ss_pred             cCHHHHHHHHHHHHhcc
Confidence            99999999999886543


No 108
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00  E-value=2.3e-40  Score=352.70  Aligned_cols=275  Identities=23%  Similarity=0.309  Sum_probs=201.3

Q ss_pred             CCCceeeeeecccCceEEEEEEE------CCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeEE
Q 003185          504 FPSLSSCDEAGKSVSSSLFRCKF------GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHK  577 (840)
Q Consensus       504 ~~~y~i~~~LG~G~fG~Vy~a~~------~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~l~g~~  577 (840)
                      ...|++.+.||+|+||.||+|.+      .+..||+|++.....   ....    ..+.+|+.++++++||||+++++++
T Consensus        20 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~----~~~~~E~~~l~~l~h~~i~~~~~~~   92 (302)
T 4e5w_A           20 KRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESG---GNHI----ADLKKEIEILRNLYHENIVKYKGIC   92 (302)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC--------CCH----HHHHHHHHHHHTCCCTTBCCEEEEE
T ss_pred             hhhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEeccccc---chhH----HHHHHHHHHHHhCCCCCeeeeeeEE
Confidence            34599999999999999999985      678999999754321   1112    3348999999999999999999999


Q ss_pred             ecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCCCc
Q 003185          578 ISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSEN  657 (840)
Q Consensus       578 ~~~~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKPeN  657 (840)
                      .....            ...++||||+++++|.+++...    ...+++..++.++.||+.||+|||++||+||||||+|
T Consensus        93 ~~~~~------------~~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~N  156 (302)
T 4e5w_A           93 TEDGG------------NGIKLIMEFLPSGSLKEYLPKN----KNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARN  156 (302)
T ss_dssp             EC---------------CCEEEEEECCTTCBHHHHHHHH----TTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGG
T ss_pred             ecCCC------------ceEEEEEEeCCCCcHHHHHHhc----cccCCHHHHHHHHHHHHHHHHHhhcCCcccCCCchhe
Confidence            86531            1359999999999999999652    3568999999999999999999999999999999999


Q ss_pred             EEEecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHHHH
Q 003185          658 ILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCL  737 (840)
Q Consensus       658 ILLd~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLGvI  737 (840)
                      ||++.+       +.+||+|||++...........       ......||..|+|||++.+    ..++.++|||||||+
T Consensus       157 il~~~~-------~~~kl~Dfg~~~~~~~~~~~~~-------~~~~~~~~~~y~aPE~~~~----~~~~~~~Di~slG~i  218 (302)
T 4e5w_A          157 VLVESE-------HQVKIGDFGLTKAIETDKEYYT-------VKDDRDSPVFWYAPECLMQ----SKFYIASDVWSFGVT  218 (302)
T ss_dssp             EEEEET-------TEEEECCCTTCEECCTTCCEEE-------CCCCTTCCGGGCCHHHHHH----CEEEHHHHHHHHHHH
T ss_pred             EEEcCC-------CCEEECcccccccccCCCccee-------ccCCCCCCccccCCeeecC----CCCCcchhHHHHHHH
Confidence            999877       4699999999987654322100       1123458889999999987    567899999999999


Q ss_pred             HHHHHhCCCCCCCCCHHHHHHHHHcCCCCCcc-hHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCC
Q 003185          738 LLELLTLQVPYMGLSELEIHDLIQMGKRPRLT-DELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPT  816 (840)
Q Consensus       738 L~ELLTG~~PF~~~~~~el~~~I~~~~~p~l~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L~dLI~rCL~~DP~  816 (840)
                      +|+|++|..|+...  ................ ..+...       . ....   ........++.+.+||.+||..||.
T Consensus       219 l~~l~~g~~p~~~~--~~~~~~~~~~~~~~~~~~~~~~~-------~-~~~~---~~~~~~~~~~~l~~li~~~l~~dp~  285 (302)
T 4e5w_A          219 LHELLTYCDSDSSP--MALFLKMIGPTHGQMTVTRLVNT-------L-KEGK---RLPCPPNCPDEVYQLMRKCWEFQPS  285 (302)
T ss_dssp             HHHHHTTTCGGGSH--HHHHHHHHCSCCGGGHHHHHHHH-------H-HTTC---CCCCCTTCCHHHHHHHHHTTCSSGG
T ss_pred             HHHHHHccCCCcch--hhHHhhccCCcccccCHHHHHHH-------H-hccC---CCCCCCCCCHHHHHHHHHHcCCCCC
Confidence            99999999986422  1111111111000000 000000       0 0000   0001123456899999999999999


Q ss_pred             CCCCHHHHHHHHHhhc
Q 003185          817 ERPTAGDLYEMFVART  832 (840)
Q Consensus       817 eRPSa~ELLehLe~l~  832 (840)
                      +|||+.++++.|+.+.
T Consensus       286 ~Rps~~~ll~~L~~ll  301 (302)
T 4e5w_A          286 NRTSFQNLIEGFEALL  301 (302)
T ss_dssp             GSCCHHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHh
Confidence            9999999999999875


No 109
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00  E-value=2.5e-40  Score=359.08  Aligned_cols=267  Identities=21%  Similarity=0.211  Sum_probs=207.4

Q ss_pred             CCCceeeeeecccCceEEEEEEE--CCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhC-CCCCcceeeeEEecC
Q 003185          504 FPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEMYGHKISS  580 (840)
Q Consensus       504 ~~~y~i~~~LG~G~fG~Vy~a~~--~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L-~HpNIV~l~g~~~~~  580 (840)
                      -++|++.+.||+|+||.||+|.+  .+..||+|+......      .+    .+.+|+.++++| +||||+++++++...
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~------~~----~~~~E~~~l~~l~~h~~i~~~~~~~~~~   77 (330)
T 2izr_A            8 GPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR------AP----QLHLEYRFYKQLGSGDGIPQVYYFGPCG   77 (330)
T ss_dssp             TTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS------SC----CHHHHHHHHHHHCSCTTSCCEEEEEEET
T ss_pred             cCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccc------hH----HHHHHHHHHHHhhCCCCCCEEEEEEecC
Confidence            36899999999999999999996  688999999754321      11    248899999999 899999999998865


Q ss_pred             CCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCCCcEEE
Q 003185          581 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILI  660 (840)
Q Consensus       581 ~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKPeNILL  660 (840)
                      ..              .+|||||+ +++|.+++...    ...+++..++.++.||+.||+|||++||+||||||+|||+
T Consensus        78 ~~--------------~~lv~e~~-~~~L~~~~~~~----~~~~~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill  138 (330)
T 2izr_A           78 KY--------------NAMVLELL-GPSLEDLFDLC----DRTFSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLI  138 (330)
T ss_dssp             TE--------------EEEEEECC-CCBHHHHHHHT----TTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE
T ss_pred             Cc--------------cEEEEEeC-CCCHHHHHHHc----CCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeee
Confidence            53              59999999 89999999862    3579999999999999999999999999999999999999


Q ss_pred             ecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHHHHHHH
Q 003185          661 DLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLE  740 (840)
Q Consensus       661 d~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLGvIL~E  740 (840)
                      +.++.  .....+||+|||+++.+........   ..........||+.|+|||++.+    ..++.++|||||||+|||
T Consensus       139 ~~~~~--~~~~~~kl~DFg~a~~~~~~~~~~~---~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~~Di~slG~il~e  209 (330)
T 2izr_A          139 GRPGN--KTQQVIHIIDFALAKEYIDPETKKH---IPYREHKSLTGTARYMSINTHLG----KEQSRRDDLEALGHMFMY  209 (330)
T ss_dssp             CCGGG--TCTTSEEECCCTTCEESBCTTTCCB---CCCCCCCCCCSCTTTCCHHHHTT----CCCCHHHHHHHHHHHHHH
T ss_pred             ccCCC--CCCceEEEEEcccceeeecCCCCcc---ccccccCCcCCCccccChHHHcC----CCCCchhHHHHHHHHHHH
Confidence            87742  1223499999999987644322110   01111244679999999999986    668999999999999999


Q ss_pred             HHhCCCCCCCCC---HHHHHHHHHcCCCCCcchHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCC
Q 003185          741 LLTLQVPYMGLS---ELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTE  817 (840)
Q Consensus       741 LLTG~~PF~~~~---~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L~dLI~rCL~~DP~e  817 (840)
                      |++|..||.+..   ..+.+..+.....+.....+                       ....+ .+.+||..||..||.+
T Consensus       210 ll~g~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~-----------------------~~~~p-~~~~li~~~l~~~p~~  265 (330)
T 2izr_A          210 FLRGSLPWQGLKADTLKERYQKIGDTKRATPIEVL-----------------------CENFP-EMATYLRYVRRLDFFE  265 (330)
T ss_dssp             HHHSSCTTTTCCCSSHHHHHHHHHHHHHHSCHHHH-----------------------TTTCH-HHHHHHHHHHHCCTTC
T ss_pred             HhcCCCCccccccccHHHHHHHHHhhhccCCHHHH-----------------------hccCh-HHHHHHHHHHhCCCCC
Confidence            999999998753   33344444332111111100                       01124 7999999999999999


Q ss_pred             CCCHHHHHHHHHhhc
Q 003185          818 RPTAGDLYEMFVART  832 (840)
Q Consensus       818 RPSa~ELLehLe~l~  832 (840)
                      ||++++|++.|+.+.
T Consensus       266 RP~~~~l~~~l~~~~  280 (330)
T 2izr_A          266 KPDYDYLRKLFTDLF  280 (330)
T ss_dssp             CCCHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHH
Confidence            999999999998765


No 110
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00  E-value=8.2e-41  Score=371.37  Aligned_cols=293  Identities=20%  Similarity=0.224  Sum_probs=208.3

Q ss_pred             CCCCCceeeeeeccc--CceEEEEEEE--CCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeEE
Q 003185          502 GSFPSLSSCDEAGKS--VSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHK  577 (840)
Q Consensus       502 ~~~~~y~i~~~LG~G--~fG~Vy~a~~--~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~l~g~~  577 (840)
                      ...++|++.+.||+|  +||.||+|++  .+..||+|++.....  .....    ..+.+|+.+++.++|||||++++++
T Consensus        22 ~~~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~----~~~~~E~~~l~~l~h~niv~~~~~~   95 (389)
T 3gni_B           22 PEGGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEAC--SNEMV----TFLQGELHVSKLFNHPNIVPYRATF   95 (389)
T ss_dssp             CCGGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGS--CHHHH----HHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             CCCCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEeccccc--ChHHH----HHHHHHHHHHHhCCCCCCCcEeEEE
Confidence            456789999999999  9999999998  478899999765432  22333    3448999999999999999999999


Q ss_pred             ecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCCCc
Q 003185          578 ISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSEN  657 (840)
Q Consensus       578 ~~~~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKPeN  657 (840)
                      .....              .||||||+++|+|.+++..   .....+++..++.++.||+.||.|||++||+||||||+|
T Consensus        96 ~~~~~--------------~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~N  158 (389)
T 3gni_B           96 IADNE--------------LWVVTSFMAYGSAKDLICT---HFMDGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASH  158 (389)
T ss_dssp             EETTE--------------EEEEEECCTTCBHHHHHHH---TCTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGG
T ss_pred             EECCE--------------EEEEEEccCCCCHHHHHhh---hcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHH
Confidence            86653              5999999999999999986   223568999999999999999999999999999999999


Q ss_pred             EEEecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHHHH
Q 003185          658 ILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCL  737 (840)
Q Consensus       658 ILLd~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLGvI  737 (840)
                      |||+.+       +.+||+|||.+............   .........||+.|+|||++.+.  ...++.++|||||||+
T Consensus       159 Ill~~~-------~~~kl~dfg~~~~~~~~~~~~~~---~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~~~DiwslG~i  226 (389)
T 3gni_B          159 ILISVD-------GKVYLSGLRSNLSMISHGQRQRV---VHDFPKYSVKVLPWLSPEVLQQN--LQGYDAKSDIYSVGIT  226 (389)
T ss_dssp             EEECTT-------CCEEECCGGGCEECEETTEECSC---BCCCCTTCTTTGGGSCHHHHSTT--SSCBCTHHHHHHHHHH
T ss_pred             EEEcCC-------CCEEEcccccceeeccccccccc---cccccccccccccccCHHHHhcc--CCCCCcHhHHHHHHHH
Confidence            999877       46999999998765432211110   11122344799999999999751  1467899999999999


Q ss_pred             HHHHHhCCCCCCCCCHHHHHHHHHcCCCCCcchHHhhh----ccCccc-----cc--------cc-cCCCCCCchhhhhh
Q 003185          738 LLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEAL----GSCHEH-----EV--------AQ-SGSGFEKPEAELET  799 (840)
Q Consensus       738 L~ELLTG~~PF~~~~~~el~~~I~~~~~p~l~~~l~~~----~~~~~~-----~~--------~~-~~~~~~~~~~~~~~  799 (840)
                      +|||++|+.||.+.+..+....+..+..+.+.+.....    ......     ..        .. ..............
T Consensus       227 l~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  306 (389)
T 3gni_B          227 ACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTF  306 (389)
T ss_dssp             HHHHHHSSCTTTTCCSTTHHHHC--------------------------------------------------------C
T ss_pred             HHHHHHCCCCCCCCCHHHHHHHHhcCCCCccccccccccccccccccccccccccccccccCccccccCCCCCCcccccc
Confidence            99999999999887655554443333222111100000    000000     00        00 00000011122345


Q ss_pred             HHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 003185          800 LSFLVDVFRRCTEENPTERPTAGDLYEMFV  829 (840)
Q Consensus       800 s~~L~dLI~rCL~~DP~eRPSa~ELLehLe  829 (840)
                      ++.+.+||.+||+.||.+|||+.|+++|..
T Consensus       307 s~~~~~li~~~L~~dP~~Rpta~ell~hp~  336 (389)
T 3gni_B          307 SPHFHHFVEQCLQRNPDARPSASTLLNHSF  336 (389)
T ss_dssp             CHHHHHHHHHHTCSCTTTSCCHHHHTTSGG
T ss_pred             CHHHHHHHHHHhhcCcccCCCHHHHhcCHH
Confidence            678999999999999999999999999843


No 111
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00  E-value=1.2e-41  Score=374.17  Aligned_cols=256  Identities=21%  Similarity=0.268  Sum_probs=202.5

Q ss_pred             CCCCCceeeeeecccCceEEEEEEE--CCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeEEec
Q 003185          502 GSFPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKIS  579 (840)
Q Consensus       502 ~~~~~y~i~~~LG~G~fG~Vy~a~~--~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~l~g~~~~  579 (840)
                      ..+++|.+.+.||+|+||.||+|.+  .+..||+|++....     .........+.+|+.+|+.++||||+++++++..
T Consensus         6 ~~i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~-----~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~   80 (336)
T 3h4j_B            6 RHIGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQL-----LKKSDMHMRVEREISYLKLLRHPHIIKLYDVITT   80 (336)
T ss_dssp             SEETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHH-----HHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEEC
T ss_pred             cccCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHH-----ccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEe
Confidence            5688999999999999999999998  67899999975321     1111223356899999999999999999999986


Q ss_pred             CCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCCCcEE
Q 003185          580 SKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENIL  659 (840)
Q Consensus       580 ~~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKPeNIL  659 (840)
                      ...              .++||||+ +|+|.+++..     ...+++..++.++.||+.||.|||++||+||||||+|||
T Consensus        81 ~~~--------------~~lv~E~~-~g~l~~~l~~-----~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIl  140 (336)
T 3h4j_B           81 PTD--------------IVMVIEYA-GGELFDYIVE-----KKRMTEDEGRRFFQQIICAIEYCHRHKIVHRDLKPENLL  140 (336)
T ss_dssp             SSE--------------EEEEECCC-CEEHHHHHHH-----HCSCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCSTTTEE
T ss_pred             CCE--------------EEEEEECC-CCcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCchhhEE
Confidence            653              59999999 6799999876     256999999999999999999999999999999999999


Q ss_pred             EecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHHHHHH
Q 003185          660 IDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLL  739 (840)
Q Consensus       660 Ld~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLGvIL~  739 (840)
                      ++.+       +.+||+|||++........           .....||+.|+|||++.+   ....+.++|||||||++|
T Consensus       141 l~~~-------~~~kl~DFG~s~~~~~~~~-----------~~~~~gt~~y~aPE~~~~---~~~~~~~~DiwslG~il~  199 (336)
T 3h4j_B          141 LDDN-------LNVKIADFGLSNIMTDGNF-----------LKTSCGSPNYAAPEVING---KLYAGPEVDVWSCGIVLY  199 (336)
T ss_dssp             ECTT-------CCEEECCSSCTBTTTTSBT-----------TCCCTTSTTTSCGGGSCC---SGGGCHHHHHHHHHHHHH
T ss_pred             EcCC-------CCEEEEEeccceeccCCcc-----------cccccCCcCcCCHHHHcC---CCCCCCccchhHHHHHHH
Confidence            9877       4599999999976543211           123469999999999975   122378999999999999


Q ss_pred             HHHhCCCCCCCCCHHHHHHHHHcCCCCCcchHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC
Q 003185          740 ELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP  819 (840)
Q Consensus       740 ELLTG~~PF~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L~dLI~rCL~~DP~eRP  819 (840)
                      +|++|..||.+.....+...+.....                            ......++.+.+||.+||..||.+||
T Consensus       200 ~ll~g~~Pf~~~~~~~~~~~i~~~~~----------------------------~~p~~~s~~~~~li~~~L~~dP~~Rp  251 (336)
T 3h4j_B          200 VMLVGRLPFDDEFIPNLFKKVNSCVY----------------------------VMPDFLSPGAQSLIRRMIVADPMQRI  251 (336)
T ss_dssp             HHHHSSCSSBCSSSTTCBCCCCSSCC----------------------------CCCTTSCHHHHHHHHTTSCSSGGGSC
T ss_pred             HHHhCCCCCCCccHHHHHHHHHcCCC----------------------------CCcccCCHHHHHHHHHHcCCChhHCc
Confidence            99999999976533222111111100                            00112356789999999999999999


Q ss_pred             CHHHHHHHHHhh
Q 003185          820 TAGDLYEMFVAR  831 (840)
Q Consensus       820 Sa~ELLehLe~l  831 (840)
                      |++||++|.+-.
T Consensus       252 t~~eil~hp~~~  263 (336)
T 3h4j_B          252 TIQEIRRDPWFN  263 (336)
T ss_dssp             CHHHHTTCHHHH
T ss_pred             CHHHHHhChhhc
Confidence            999999997643


No 112
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00  E-value=4.8e-41  Score=354.72  Aligned_cols=255  Identities=24%  Similarity=0.365  Sum_probs=205.3

Q ss_pred             CCCCCceeeeeecccCceEEEEEEECCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeEEecCC
Q 003185          502 GSFPSLSSCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK  581 (840)
Q Consensus       502 ~~~~~y~i~~~LG~G~fG~Vy~a~~~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~l~g~~~~~~  581 (840)
                      ..+++|++.+.||+|+||.||+|.+.+..+|+|+.....      ..+    .+.+|+.++++++||||+++++++....
T Consensus        18 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~------~~~----~~~~E~~~l~~l~h~~iv~~~~~~~~~~   87 (278)
T 1byg_A           18 LNMKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKNDA------TAQ----AFLAEASVMTQLRHSNLVQLLGVIVEEK   87 (278)
T ss_dssp             CCGGGEEEEEEEEECSSCEEEEEEETTEEEEEEECCCCC--------H----HHHHTHHHHTTCCCTTBCCEEEEECCC-
T ss_pred             CChhhceEEeEEecCCCceEEEEEEcCCEEEEEEecchh------HHH----HHHHHHHHHHhCCCCCEeeEEEEEEcCC
Confidence            567899999999999999999999999999999864221      222    3489999999999999999999876433


Q ss_pred             CCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCCCcEEEe
Q 003185          582 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID  661 (840)
Q Consensus       582 ~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKPeNILLd  661 (840)
                      .             ..++||||+++++|.+++....   ...+++..++.++.||+.||.|||++||+||||||+|||++
T Consensus        88 ~-------------~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~  151 (278)
T 1byg_A           88 G-------------GLYIVTEYMAKGSLVDYLRSRG---RSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVS  151 (278)
T ss_dssp             --------------CCEEEECCCTTEEHHHHHHHHH---HHHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC
T ss_pred             C-------------ceEEEEecCCCCCHHHHHHhcc---cccCCHHHHHHHHHHHHHHHHHHHhCCccccCCCcceEEEe
Confidence            1             2499999999999999997621   12378999999999999999999999999999999999998


Q ss_pred             cccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHHHHHHHH
Q 003185          662 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL  741 (840)
Q Consensus       662 ~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLGvIL~EL  741 (840)
                      .+       +.+||+|||++.......             ....+++.|+|||++.+    ..++.++||||||+++|+|
T Consensus       152 ~~-------~~~~l~Dfg~~~~~~~~~-------------~~~~~~~~y~aPE~~~~----~~~~~~~Di~slG~il~~l  207 (278)
T 1byg_A          152 ED-------NVAKVSDFGLTKEASSTQ-------------DTGKLPVKWTAPEALRE----KKFSTKSDVWSFGILLWEI  207 (278)
T ss_dssp             TT-------SCEEECCCCC-------------------------CCTTTSCHHHHHH----CCCCHHHHHHHHHHHHHHH
T ss_pred             CC-------CcEEEeeccccccccccc-------------cCCCccccccCHHHhCC----CCCCchhcHHHHHHHHHHH
Confidence            76       469999999987554321             12247889999999986    6789999999999999999


Q ss_pred             Hh-CCCCCCCCCHHHHHHHHHcCCCCCcchHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCC
Q 003185          742 LT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPT  820 (840)
Q Consensus       742 LT-G~~PF~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L~dLI~rCL~~DP~eRPS  820 (840)
                      ++ |..||......++...+..+..+..+.                           ..++.+.+||.+||..||.+|||
T Consensus       208 ~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~l~~li~~~l~~~p~~Rps  260 (278)
T 1byg_A          208 YSFGRVPYPRIPLKDVVPRVEKGYKMDAPD---------------------------GCPPAVYEVMKNCWHLDAAMRPS  260 (278)
T ss_dssp             HTTSCCSCTTSCGGGHHHHHTTTCCCCCCT---------------------------TCCHHHHHHHHHHTCSSGGGSCC
T ss_pred             HhCCCCCCCCCCHHHHHHHHhcCCCCCCcc---------------------------cCCHHHHHHHHHHhcCChhhCCC
Confidence            98 999998887777776665554332221                           23457999999999999999999


Q ss_pred             HHHHHHHHHhhcC
Q 003185          821 AGDLYEMFVARTS  833 (840)
Q Consensus       821 a~ELLehLe~l~~  833 (840)
                      +.++++.|+.+..
T Consensus       261 ~~~l~~~L~~i~~  273 (278)
T 1byg_A          261 FLQLREQLEHIKT  273 (278)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHh
Confidence            9999999998864


No 113
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00  E-value=6.6e-41  Score=376.67  Aligned_cols=255  Identities=21%  Similarity=0.339  Sum_probs=202.6

Q ss_pred             CCCCCceeeeeecccCceEEEEEEE--CCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhC-CCCCcceeeeEEe
Q 003185          502 GSFPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEMYGHKI  578 (840)
Q Consensus       502 ~~~~~y~i~~~LG~G~fG~Vy~a~~--~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L-~HpNIV~l~g~~~  578 (840)
                      ..+++|++.+.||+|+||.||+|++  .+..+|+|++...... .....+    .+.+|..+|.++ +|||||++++++.
T Consensus        49 ~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~-~~~~~~----~~~~E~~il~~~~~hp~Iv~l~~~~~  123 (396)
T 4dc2_A           49 LGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVN-DDEDID----WVQTEKHVFEQASNHPFLVGLHSCFQ  123 (396)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC-----CC----HHHHHHHHHHHHTTCTTBCCEEEEEE
T ss_pred             CChhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhcc-CHHHHH----HHHHHHHHHHhcCCCCCcCeeEEEEE
Confidence            5678999999999999999999997  4678999997644322 112222    348899999887 7999999999998


Q ss_pred             cCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCCCcE
Q 003185          579 SSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENI  658 (840)
Q Consensus       579 ~~~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKPeNI  658 (840)
                      ....              .||||||++||+|..++..     ...+++..++.++.||+.||.|||++||+||||||+||
T Consensus       124 ~~~~--------------~~lV~E~~~gg~L~~~l~~-----~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDLKp~NI  184 (396)
T 4dc2_A          124 TESR--------------LFFVIEYVNGGDLMFHMQR-----QRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNV  184 (396)
T ss_dssp             CSSE--------------EEEEEECCTTCBHHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGE
T ss_pred             ECCE--------------EEEEEEcCCCCcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHE
Confidence            6653              5999999999999999986     25699999999999999999999999999999999999


Q ss_pred             EEecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHHHHH
Q 003185          659 LIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLL  738 (840)
Q Consensus       659 LLd~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLGvIL  738 (840)
                      ||+.+       +.+||+|||+++.......          .....+||+.|+|||++.+    ..++.++|||||||+|
T Consensus       185 Ll~~~-------g~ikL~DFGla~~~~~~~~----------~~~~~~gt~~Y~aPE~l~~----~~~~~~~DiwslGvll  243 (396)
T 4dc2_A          185 LLDSE-------GHIKLTDYGMCKEGLRPGD----------TTSTFCGTPNYIAPEILRG----EDYGFSVDWWALGVLM  243 (396)
T ss_dssp             EECTT-------SCEEECCCTTCBCCCCTTC----------CBCCCCBCGGGCCHHHHTT----CCBCTHHHHHHHHHHH
T ss_pred             EECCC-------CCEEEeecceeeecccCCC----------ccccccCCcccCCchhhcC----CCCChHHHHHHHHHHH
Confidence            99877       4699999999975322111          1234579999999999986    6789999999999999


Q ss_pred             HHHHhCCCCCCCCC---------HHHHHHHHHcCCCCCcchHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHH
Q 003185          739 LELLTLQVPYMGLS---------ELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRR  809 (840)
Q Consensus       739 ~ELLTG~~PF~~~~---------~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L~dLI~r  809 (840)
                      |||++|+.||....         ...+...+.... ..++.                           ..+..+.+||.+
T Consensus       244 yell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~-~~~p~---------------------------~~s~~~~~li~~  295 (396)
T 4dc2_A          244 FEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQ-IRIPR---------------------------SLSVKAASVLKS  295 (396)
T ss_dssp             HHHHHSSCSSTTTTC------CCHHHHHHHHHHCC-CCCCT---------------------------TSCHHHHHHHHH
T ss_pred             HHHHhCCCCCcccccccccchhhHHHHHHHHhccc-cCCCC---------------------------cCCHHHHHHHHH
Confidence            99999999996431         222333443332 11221                           124578999999


Q ss_pred             hcccCCCCCCCH------HHHHHHHH
Q 003185          810 CTEENPTERPTA------GDLYEMFV  829 (840)
Q Consensus       810 CL~~DP~eRPSa------~ELLehLe  829 (840)
                      ||+.||.+||++      ++|++|..
T Consensus       296 lL~~dP~~R~~~~~~~~~~ei~~Hpf  321 (396)
T 4dc2_A          296 FLNKDPKERLGCHPQTGFADIQGHPF  321 (396)
T ss_dssp             HTCSCTTTSTTCSTTTHHHHHHHSTT
T ss_pred             HhcCCHhHcCCCCCCCCHHHHhcCcc
Confidence            999999999985      79998854


No 114
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=1.4e-40  Score=368.57  Aligned_cols=282  Identities=19%  Similarity=0.225  Sum_probs=206.3

Q ss_pred             CCCceeeeeecccCceEEEEEEE--CCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeEEecCC
Q 003185          504 FPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK  581 (840)
Q Consensus       504 ~~~y~i~~~LG~G~fG~Vy~a~~--~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~l~g~~~~~~  581 (840)
                      -++|++.+.||+|+||.||+|.+  .+..||+|+...  ......    ..+++.+|+.+|+.++||||+++++++....
T Consensus        24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~--~~~~~~----~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~   97 (367)
T 1cm8_A           24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYR--PFQSEL----FAKRAYRELRLLKHMRHENVIGLLDVFTPDE   97 (367)
T ss_dssp             BSSEEEEEEC------CEEEEEETTTCCEEEEEECSS--TTSSHH----HHHHHHHHHHHHHHCCBTTBCCCSEEECSCS
T ss_pred             cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCc--cccCHH----HHHHHHHHHHHHHhCCCcCCCCceeeEecCC
Confidence            46899999999999999999997  577899998532  222222    2344589999999999999999999987654


Q ss_pred             CCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCCCcEEEe
Q 003185          582 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID  661 (840)
Q Consensus       582 ~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKPeNILLd  661 (840)
                      ..        ......|+||||+ +++|.+++..      ..+++..++.++.||+.||.|||++||+||||||+|||++
T Consensus        98 ~~--------~~~~~~~lv~e~~-~~~L~~~~~~------~~l~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~NIll~  162 (367)
T 1cm8_A           98 TL--------DDFTDFYLVMPFM-GTDLGKLMKH------EKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVN  162 (367)
T ss_dssp             ST--------TTCCCCEEEEECC-SEEHHHHHHH------CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEC
T ss_pred             cc--------ccCceEEEEEecC-CCCHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHCCccccCcCHHHEEEc
Confidence            22        1123469999999 7899999976      4689999999999999999999999999999999999998


Q ss_pred             cccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHHHHHHHH
Q 003185          662 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL  741 (840)
Q Consensus       662 ~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLGvIL~EL  741 (840)
                      .+       +.+||+|||+++.....             ....+||+.|+|||++.+   ...++.++|||||||++|||
T Consensus       163 ~~-------~~~kl~Dfg~a~~~~~~-------------~~~~~~t~~y~aPE~~~~---~~~~~~~~DiwslG~il~el  219 (367)
T 1cm8_A          163 ED-------CELKILDFGLARQADSE-------------MTGYVVTRWYRAPEVILN---WMRYTQTVDIWSVGCIMAEM  219 (367)
T ss_dssp             TT-------CCEEECCCTTCEECCSS-------------CCSSCSCGGGCCTHHHHT---TTCCCTTHHHHHHHHHHHHH
T ss_pred             CC-------CCEEEEeeecccccccc-------------cCcCcCCCCcCCHHHHhC---CCCCChhhhHHHHHHHHHHH
Confidence            77       46999999999865431             123468999999999875   24689999999999999999


Q ss_pred             HhCCCCCCCCCHHHHHHHHHcCCCCCcchHHhhhccCccccccccC---CCCCCchhhhhhHHHHHHHHHHhcccCCCCC
Q 003185          742 LTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSG---SGFEKPEAELETLSFLVDVFRRCTEENPTER  818 (840)
Q Consensus       742 LTG~~PF~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~---~~~~~~~~~~~~s~~L~dLI~rCL~~DP~eR  818 (840)
                      ++|+.||.+.+..+.+..+.........+.+..+.......+....   ............++.+.+||.+||..||.+|
T Consensus       220 l~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R  299 (367)
T 1cm8_A          220 ITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQR  299 (367)
T ss_dssp             HHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTS
T ss_pred             HhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHC
Confidence            9999999998887777776554222222222111100000000000   0001111223346789999999999999999


Q ss_pred             CCHHHHHHHHH
Q 003185          819 PTAGDLYEMFV  829 (840)
Q Consensus       819 PSa~ELLehLe  829 (840)
                      ||+.++++|..
T Consensus       300 ~t~~e~l~hp~  310 (367)
T 1cm8_A          300 VTAGEALAHPY  310 (367)
T ss_dssp             CCHHHHHHSGG
T ss_pred             CCHHHHhcChH
Confidence            99999999854


No 115
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=2.8e-40  Score=360.25  Aligned_cols=263  Identities=21%  Similarity=0.320  Sum_probs=207.7

Q ss_pred             CCCCCceeeeeecccCceEEEEEEECC------eeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeee
Q 003185          502 GSFPSLSSCDEAGKSVSSSLFRCKFGS------ADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYG  575 (840)
Q Consensus       502 ~~~~~y~i~~~LG~G~fG~Vy~a~~~~------~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~l~g  575 (840)
                      +.-.+|.+.+.||+|+||.||+|.+..      ..||+|+....   .......    .+.+|+.++++++||||+++++
T Consensus        41 i~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~----~~~~E~~~l~~l~h~~iv~~~~  113 (333)
T 1mqb_A           41 IHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAG---YTEKQRV----DFLGEAGIMGQFSHHNIIRLEG  113 (333)
T ss_dssp             CCTTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTT---CCHHHHH----HHHHHHHHHHTCCCTTBCCEEE
T ss_pred             CChHHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCC---CCHHHHH----HHHHHHHHHHhCCCCCCCcEEE
Confidence            456789999999999999999998632      34888886432   1222223    3489999999999999999999


Q ss_pred             EEecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCC
Q 003185          576 HKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKS  655 (840)
Q Consensus       576 ~~~~~~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKP  655 (840)
                      ++.....              .+|||||+++++|.+++..    ....+++..++.++.||+.||.|||++||+||||||
T Consensus       114 ~~~~~~~--------------~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp  175 (333)
T 1mqb_A          114 VISKYKP--------------MMIITEYMENGALDKFLRE----KDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAA  175 (333)
T ss_dssp             EECSSSS--------------EEEEEECCTTEEHHHHHHH----TTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCG
T ss_pred             EEecCCC--------------cEEEEeCCCCCcHHHHHHh----CCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCh
Confidence            9876543              4999999999999999976    235689999999999999999999999999999999


Q ss_pred             CcEEEecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHH
Q 003185          656 ENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYG  735 (840)
Q Consensus       656 eNILLd~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLG  735 (840)
                      +|||++.+       +.+||+|||+++.........       .......+|+.|+|||++.+    ..++.++||||||
T Consensus       176 ~NIl~~~~-------~~~kl~Dfg~~~~~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~----~~~~~~~Di~slG  237 (333)
T 1mqb_A          176 RNILVNSN-------LVCKVSDFGLSRVLEDDPEAT-------YTTSGGKIPIRWTAPEAISY----RKFTSASDVWSFG  237 (333)
T ss_dssp             GGEEECTT-------CCEEECCCCC------------------------CCCGGGSCHHHHHS----CCCCHHHHHHHHH
T ss_pred             heEEECCC-------CcEEECCCCcchhhccccccc-------cccCCCCccccccCchhccc----CCCCchhhhHHHH
Confidence            99999876       469999999998765422110       01122346889999999986    6789999999999


Q ss_pred             HHHHHHHh-CCCCCCCCCHHHHHHHHHcCCCCCcchHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccC
Q 003185          736 CLLLELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEEN  814 (840)
Q Consensus       736 vIL~ELLT-G~~PF~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L~dLI~rCL~~D  814 (840)
                      |++|||++ |..||.+....++...+..+.++..+.                           ..+..+.+||.+||..|
T Consensus       238 ~il~ellt~g~~pf~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~l~~li~~~l~~~  290 (333)
T 1mqb_A          238 IVMWEVMTYGERPYWELSNHEVMKAINDGFRLPTPM---------------------------DCPSAIYQLMMQCWQQE  290 (333)
T ss_dssp             HHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCCCCCT---------------------------TCBHHHHHHHHHHTCSS
T ss_pred             HHHHHHHcCCCCCcccCCHHHHHHHHHCCCcCCCcc---------------------------cCCHHHHHHHHHHcCCC
Confidence            99999999 999999988888888777664433221                           12457899999999999


Q ss_pred             CCCCCCHHHHHHHHHhhcCC
Q 003185          815 PTERPTAGDLYEMFVARTSS  834 (840)
Q Consensus       815 P~eRPSa~ELLehLe~l~~~  834 (840)
                      |.+||++.+|+++|+.+...
T Consensus       291 p~~Rps~~~l~~~L~~~~~~  310 (333)
T 1mqb_A          291 RARRPKFADIVSILDKLIRA  310 (333)
T ss_dssp             TTTSCCHHHHHHHHHHHHHS
T ss_pred             hhhCcCHHHHHHHHHHHHhc
Confidence            99999999999999987644


No 116
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00  E-value=2e-40  Score=382.04  Aligned_cols=266  Identities=22%  Similarity=0.298  Sum_probs=212.0

Q ss_pred             CCCCceeeeeecccCceEEEEEEE--CCeeEEEEEEecccCCCC-----hHHHHHhHHhHHHHHHHHHhCCCCCcceeee
Q 003185          503 SFPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSS-----ADEIRNFEYSCLGEVRMLGALRHSCIVEMYG  575 (840)
Q Consensus       503 ~~~~y~i~~~LG~G~fG~Vy~a~~--~~~~vAVKI~~lk~~~~~-----~~~~~~f~~~~~rEi~iL~~L~HpNIV~l~g  575 (840)
                      ..++|.+.+.||+|+||.||+|.+  .+..+|+|++........     ....+.+.+.+.+|+.+|++|+|||||++++
T Consensus        34 i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~  113 (504)
T 3q5i_A           34 IGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFD  113 (504)
T ss_dssp             GGGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEE
T ss_pred             cccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEE
Confidence            457899999999999999999997  567899999764432111     1111233456699999999999999999999


Q ss_pred             EEecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCC
Q 003185          576 HKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKS  655 (840)
Q Consensus       576 ~~~~~~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKP  655 (840)
                      ++....              ..||||||++||+|.+++..     ...+++..++.++.||+.||.|||++||+||||||
T Consensus       114 ~~~~~~--------------~~~lv~e~~~gg~L~~~l~~-----~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp  174 (504)
T 3q5i_A          114 VFEDKK--------------YFYLVTEFYEGGELFEQIIN-----RHKFDECDAANIMKQILSGICYLHKHNIVHRDIKP  174 (504)
T ss_dssp             EEECSS--------------EEEEEEECCTTCBHHHHHHH-----HSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSG
T ss_pred             EEEcCC--------------EEEEEEecCCCCcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCcH
Confidence            998655              35999999999999999976     25699999999999999999999999999999999


Q ss_pred             CcEEEecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHH
Q 003185          656 ENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYG  735 (840)
Q Consensus       656 eNILLd~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLG  735 (840)
                      +|||++.++    ....+||+|||++........           .....||+.|+|||++.+     .++.++||||||
T Consensus       175 ~Nil~~~~~----~~~~~kl~Dfg~a~~~~~~~~-----------~~~~~gt~~y~aPE~~~~-----~~~~~~DiwslG  234 (504)
T 3q5i_A          175 ENILLENKN----SLLNIKIVDFGLSSFFSKDYK-----------LRDRLGTAYYIAPEVLKK-----KYNEKCDVWSCG  234 (504)
T ss_dssp             GGEEESSTT----CCSSEEECCCTTCEECCTTSC-----------BCCCCSCTTTCCHHHHTT-----CBCTHHHHHHHH
T ss_pred             HHEEEecCC----CCccEEEEECCCCEEcCCCCc-----------cccccCCcCCCCHHHhcc-----CCCchHHHHHHH
Confidence            999998763    124699999999986643211           123469999999999863     578999999999


Q ss_pred             HHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCcchHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCC
Q 003185          736 CLLLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENP  815 (840)
Q Consensus       736 vIL~ELLTG~~PF~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L~dLI~rCL~~DP  815 (840)
                      |++|+|++|..||.+.+..++...+..+........+                        ...++.+.+||.+||..||
T Consensus       235 ~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~------------------------~~~s~~~~~li~~~L~~dp  290 (504)
T 3q5i_A          235 VIMYILLCGYPPFGGQNDQDIIKKVEKGKYYFDFNDW------------------------KNISDEAKELIKLMLTYDY  290 (504)
T ss_dssp             HHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCHHHH------------------------TTSCHHHHHHHHHHTCSST
T ss_pred             HHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCcccc------------------------CCCCHHHHHHHHHHcCCCh
Confidence            9999999999999999999988888876433222111                        2235679999999999999


Q ss_pred             CCCCCHHHHHHHHHhh
Q 003185          816 TERPTAGDLYEMFVAR  831 (840)
Q Consensus       816 ~eRPSa~ELLehLe~l  831 (840)
                      .+|||+.|+++|.+-.
T Consensus       291 ~~R~t~~e~l~h~~~~  306 (504)
T 3q5i_A          291 NKRCTAEEALNSRWIK  306 (504)
T ss_dssp             TTSCCHHHHHTSHHHH
T ss_pred             hHCCCHHHHhcCHhhh
Confidence            9999999999996543


No 117
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00  E-value=1.3e-40  Score=382.56  Aligned_cols=256  Identities=24%  Similarity=0.333  Sum_probs=206.5

Q ss_pred             CCceeeeeecccCceEEEEEEE--CCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeEEecCCC
Q 003185          505 PSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW  582 (840)
Q Consensus       505 ~~y~i~~~LG~G~fG~Vy~a~~--~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~l~g~~~~~~~  582 (840)
                      ++|++.+.||+|+||+||+|.+  .+..+|+|++.......  ...    ..+.+|+.+|+.++|||||++++++.... 
T Consensus        37 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~--~~~----~~~~~E~~~l~~l~hpniv~~~~~~~~~~-  109 (494)
T 3lij_A           37 EMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVST--SSN----SKLLEEVAVLKLLDHPNIMKLYDFFEDKR-  109 (494)
T ss_dssp             HHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-------CTT----HHHHHHHHHHTTCCCTTBCCEEEEEECSS-
T ss_pred             cCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCc--hHH----HHHHHHHHHHHhCCCCCCCeEEEEEEeCC-
Confidence            4699999999999999999998  56789999976432211  112    23489999999999999999999998655 


Q ss_pred             CCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCCCcEEEec
Q 003185          583 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL  662 (840)
Q Consensus       583 ~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKPeNILLd~  662 (840)
                                   ..||||||+.+|+|.+++..     ...+++..++.++.||+.||.|||++||+||||||+|||++.
T Consensus       110 -------------~~~lv~e~~~~g~L~~~~~~-----~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~  171 (494)
T 3lij_A          110 -------------NYYLVMECYKGGELFDEIIH-----RMKFNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLES  171 (494)
T ss_dssp             -------------EEEEEEECCCSCBHHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESC
T ss_pred             -------------EEEEEEecCCCCcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChhhEEEeC
Confidence                         35999999999999999876     256899999999999999999999999999999999999976


Q ss_pred             ccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHHHHHHHHH
Q 003185          663 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL  742 (840)
Q Consensus       663 ~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLGvIL~ELL  742 (840)
                      .+    ....+||+|||++........           .....||+.|+|||++.+     .++.++|||||||++|+|+
T Consensus       172 ~~----~~~~~kl~DfG~a~~~~~~~~-----------~~~~~gt~~y~aPE~l~~-----~~~~~~DiwslG~il~~ll  231 (494)
T 3lij_A          172 KE----KDALIKIVDFGLSAVFENQKK-----------MKERLGTAYYIAPEVLRK-----KYDEKCDVWSIGVILFILL  231 (494)
T ss_dssp             SS----TTCCEEECCCTTCEECBTTBC-----------BCCCCSCTTTCCHHHHTT-----CBCTHHHHHHHHHHHHHHH
T ss_pred             CC----CCCcEEEEECCCCeECCCCcc-----------ccccCCCcCeeCHHHHcc-----cCCCchhHHHHHHHHHHHH
Confidence            53    235699999999987643221           123469999999999863     5789999999999999999


Q ss_pred             hCCCCCCCCCHHHHHHHHHcCCCCCcchHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHH
Q 003185          743 TLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAG  822 (840)
Q Consensus       743 TG~~PF~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L~dLI~rCL~~DP~eRPSa~  822 (840)
                      +|..||.+.+..++...+..+........                        ....++.+.+||.+||+.||.+|||+.
T Consensus       232 ~g~~pf~~~~~~~~~~~i~~~~~~~~~~~------------------------~~~~s~~~~~li~~~L~~dp~~R~s~~  287 (494)
T 3lij_A          232 AGYPPFGGQTDQEILRKVEKGKYTFDSPE------------------------WKNVSEGAKDLIKQMLQFDSQRRISAQ  287 (494)
T ss_dssp             HSSCSSCCSSHHHHHHHHHHTCCCCCSGG------------------------GTTSCHHHHHHHHHHTCSSTTTSCCHH
T ss_pred             hCCCCCCCCCHHHHHHHHHhCCCCCCchh------------------------cccCCHHHHHHHHHHCCCChhhCccHH
Confidence            99999999999988888877644322211                        112356799999999999999999999


Q ss_pred             HHHHHHH
Q 003185          823 DLYEMFV  829 (840)
Q Consensus       823 ELLehLe  829 (840)
                      ++++|.+
T Consensus       288 e~l~hp~  294 (494)
T 3lij_A          288 QALEHPW  294 (494)
T ss_dssp             HHHTCHH
T ss_pred             HHhcCcc
Confidence            9999844


No 118
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00  E-value=1.2e-40  Score=368.39  Aligned_cols=255  Identities=24%  Similarity=0.289  Sum_probs=208.2

Q ss_pred             CCCCCceeeeeecccCceEEEEEEEC--CeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhC-CCCCcceeeeEEe
Q 003185          502 GSFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEMYGHKI  578 (840)
Q Consensus       502 ~~~~~y~i~~~LG~G~fG~Vy~a~~~--~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L-~HpNIV~l~g~~~  578 (840)
                      ..+++|++.+.||+|+||.||+|++.  +..||+|+......     ........+.+|..+|..+ +||||+++++++.
T Consensus        17 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~-----~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~   91 (353)
T 2i0e_A           17 MKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVV-----IQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQ   91 (353)
T ss_dssp             --CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHH-----HHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEE
T ss_pred             CchHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHh-----hcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEE
Confidence            57889999999999999999999985  46799998754311     0111123448899999988 7999999999998


Q ss_pred             cCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCCCcE
Q 003185          579 SSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENI  658 (840)
Q Consensus       579 ~~~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKPeNI  658 (840)
                      ....              .||||||++||+|.+++..     ...+++..++.++.||+.||.|||++||+||||||+||
T Consensus        92 ~~~~--------------~~lv~E~~~gg~L~~~l~~-----~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NI  152 (353)
T 2i0e_A           92 TMDR--------------LYFVMEYVNGGDLMYHIQQ-----VGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNV  152 (353)
T ss_dssp             CSSE--------------EEEEEECCCSCBHHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGE
T ss_pred             cCCE--------------EEEEEeCCCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHE
Confidence            6553              5999999999999999986     24699999999999999999999999999999999999


Q ss_pred             EEecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHHHHH
Q 003185          659 LIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLL  738 (840)
Q Consensus       659 LLd~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLGvIL  738 (840)
                      |++.+       +.+||+|||+++.......          ......||+.|+|||++.+    ..++.++|||||||++
T Consensus       153 ll~~~-------g~vkL~DFG~a~~~~~~~~----------~~~~~~gt~~y~aPE~~~~----~~~~~~~DiwslG~il  211 (353)
T 2i0e_A          153 MLDSE-------GHIKIADFGMCKENIWDGV----------TTKTFCGTPDYIAPEIIAY----QPYGKSVDWWAFGVLL  211 (353)
T ss_dssp             EECTT-------SCEEECCCTTCBCCCCTTC----------CBCCCCSCGGGCCHHHHTT----CCBSTHHHHHHHHHHH
T ss_pred             EEcCC-------CcEEEEeCCcccccccCCc----------ccccccCCccccChhhhcC----CCcCCcccccchHHHH
Confidence            99877       4699999999975432111          1234579999999999976    6689999999999999


Q ss_pred             HHHHhCCCCCCCCCHHHHHHHHHcCCCCCcchHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCC
Q 003185          739 LELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTER  818 (840)
Q Consensus       739 ~ELLTG~~PF~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L~dLI~rCL~~DP~eR  818 (840)
                      |||++|+.||.+.+..++...+..... .++.                           ..+..+.+||.+||..||.+|
T Consensus       212 ~ell~G~~Pf~~~~~~~~~~~i~~~~~-~~p~---------------------------~~s~~~~~li~~lL~~dP~~R  263 (353)
T 2i0e_A          212 YEMLAGQAPFEGEDEDELFQSIMEHNV-AYPK---------------------------SMSKEAVAICKGLMTKHPGKR  263 (353)
T ss_dssp             HHHHHSSCSSCCSSHHHHHHHHHHCCC-CCCT---------------------------TSCHHHHHHHHHHTCSCTTSC
T ss_pred             HHHHcCCCCCCCCCHHHHHHHHHhCCC-CCCC---------------------------CCCHHHHHHHHHHhhcCHHHc
Confidence            999999999999988888888876532 1221                           124578999999999999999


Q ss_pred             C-----CHHHHHHHHH
Q 003185          819 P-----TAGDLYEMFV  829 (840)
Q Consensus       819 P-----Sa~ELLehLe  829 (840)
                      |     ++++|++|..
T Consensus       264 ~~~~~~~~~~i~~h~~  279 (353)
T 2i0e_A          264 LGCGPEGERDIKEHAF  279 (353)
T ss_dssp             TTCSTTHHHHHHTSGG
T ss_pred             CCCCCCCHHHHhcCcc
Confidence            9     4699998854


No 119
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00  E-value=3e-41  Score=366.23  Aligned_cols=282  Identities=20%  Similarity=0.222  Sum_probs=205.6

Q ss_pred             CCCceeeeeecccCceEEEEEEE--CCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeEEecCC
Q 003185          504 FPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK  581 (840)
Q Consensus       504 ~~~y~i~~~LG~G~fG~Vy~a~~--~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~l~g~~~~~~  581 (840)
                      +++|.+.+.||+|+||.||+|.+  .+..||+|++.....   ....    ..+.+|+.+|++++||||+++++++....
T Consensus         1 l~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~----~~~~~E~~~l~~l~h~~iv~~~~~~~~~~   73 (324)
T 3mtl_A            1 METYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHE---EGAP----CTAIREVSLLKDLKHANIVTLHDIIHTEK   73 (324)
T ss_dssp             CCSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC---------C----CCCCCCHHHHSCCCCTTBCCEEEEEECSS
T ss_pred             CCceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccc---cccc----hhHHHHHHHHHhcCCCCCCeeeeEEeeCC
Confidence            57899999999999999999998  577899998754321   1111    12267999999999999999999998665


Q ss_pred             CCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCCCcEEEe
Q 003185          582 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID  661 (840)
Q Consensus       582 ~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKPeNILLd  661 (840)
                      .              .+|||||+. |+|.+++..    ....+++..++.++.||+.||.|||++||+||||||+|||++
T Consensus        74 ~--------------~~lv~e~~~-~~l~~~~~~----~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dikp~NIl~~  134 (324)
T 3mtl_A           74 S--------------LTLVFEYLD-KDLKQYLDD----CGNIINMHNVKLFLFQLLRGLAYCHRQKVLHRDLKPQNLLIN  134 (324)
T ss_dssp             C--------------EEEEEECCS-EEHHHHHHH----TTTCCCHHHHHHHHHHHHHHHHHHHHTTEEESSCCGGGEEEC
T ss_pred             E--------------EEEEecccc-cCHHHHHHh----cCCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCcCHHHEEEC
Confidence            4              499999998 599999876    235689999999999999999999999999999999999998


Q ss_pred             cccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHHHHHHHH
Q 003185          662 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL  741 (840)
Q Consensus       662 ~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLGvIL~EL  741 (840)
                      .+       +.+||+|||+++........          .....||+.|+|||++.+   ...++.++|||||||++|+|
T Consensus       135 ~~-------~~~kl~Dfg~a~~~~~~~~~----------~~~~~~t~~y~aPE~~~~---~~~~~~~~DiwslG~il~~l  194 (324)
T 3mtl_A          135 ER-------GELKLADFGLARAKSIPTKT----------YDNEVVTLWYRPPDILLG---STDYSTQIDMWGVGCIFYEM  194 (324)
T ss_dssp             TT-------CCEEECSSSEEECC----------------------CGGGCCHHHHTT---CCCCCTHHHHHHHHHHHHHH
T ss_pred             CC-------CCEEEccCcccccccCCccc----------cccccCcccccChhhhcC---CCCCCcHHHHHHHHHHHHHH
Confidence            77       45999999999765432111          123468999999999875   34678999999999999999


Q ss_pred             HhCCCCCCCCCHHHHHHHHHcCCCCCcchHHhhhccCccccccccC--CCCCCchhhhhhHHHHHHHHHHhcccCCCCCC
Q 003185          742 LTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSG--SGFEKPEAELETLSFLVDVFRRCTEENPTERP  819 (840)
Q Consensus       742 LTG~~PF~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~--~~~~~~~~~~~~s~~L~dLI~rCL~~DP~eRP  819 (840)
                      ++|+.||.+.+..+....+...........+...............  ............+..+.+||.+||+.||.+||
T Consensus       195 ~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~  274 (324)
T 3mtl_A          195 ATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRI  274 (324)
T ss_dssp             HHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCHHHHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSC
T ss_pred             HhCCCCCCCCCHHHHHHHHHHHhCCCChHhchhhhcchhhcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCC
Confidence            9999999999888777776554222222211111100000000000  00001112233467889999999999999999


Q ss_pred             CHHHHHHHHHhh
Q 003185          820 TAGDLYEMFVAR  831 (840)
Q Consensus       820 Sa~ELLehLe~l  831 (840)
                      |++|+++|.+-.
T Consensus       275 t~~e~l~hp~f~  286 (324)
T 3mtl_A          275 SAEDAMKHPFFL  286 (324)
T ss_dssp             CHHHHTTSGGGG
T ss_pred             CHHHHhcChhhh
Confidence            999999986543


No 120
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00  E-value=1.2e-40  Score=362.74  Aligned_cols=260  Identities=19%  Similarity=0.310  Sum_probs=204.3

Q ss_pred             CCCCCceeeeeecccCceEEEEEEE--CCeeE----EEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeee
Q 003185          502 GSFPSLSSCDEAGKSVSSSLFRCKF--GSADA----AAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYG  575 (840)
Q Consensus       502 ~~~~~y~i~~~LG~G~fG~Vy~a~~--~~~~v----AVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~l~g  575 (840)
                      ...++|++.+.||+|+||.||+|.+  .+..+    ++|......   .....    ..+.+|+.++++++||||+++++
T Consensus        12 l~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~---~~~~~----~~~~~E~~~l~~l~hp~iv~~~~   84 (327)
T 3lzb_A           12 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT---SPKAN----KEILDEAYVMASVDNPHVCRLLG   84 (327)
T ss_dssp             CCTTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCS---SCCCH----HHHHHHHHHHTTCCBTTBCCCCE
T ss_pred             cCHhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeecccc---CHHHH----HHHHHHHHHHHhCCCCCeeEEEE
Confidence            4567899999999999999999997  34444    555432111   11122    23489999999999999999999


Q ss_pred             EEecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCC
Q 003185          576 HKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKS  655 (840)
Q Consensus       576 ~~~~~~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKP  655 (840)
                      ++....               .++||||+.+|+|.+++..    ....+++..++.|+.||+.||.|||++||+||||||
T Consensus        85 ~~~~~~---------------~~~v~~~~~~g~L~~~l~~----~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp  145 (327)
T 3lzb_A           85 ICLTST---------------VQLITQLMPFGCLLDYVRE----HKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAA  145 (327)
T ss_dssp             EEESSS---------------EEEEECCCSSCBHHHHHHH----TTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCG
T ss_pred             EEecCC---------------ceEEEEecCCCcHHHHHHh----cCCCCCHHHHHHHHHHHHHHHHHHhhCCCcCCCCCH
Confidence            998543               4899999999999999986    235689999999999999999999999999999999


Q ss_pred             CcEEEecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHH
Q 003185          656 ENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYG  735 (840)
Q Consensus       656 eNILLd~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLG  735 (840)
                      +|||++.+       +.+||+|||+++.........        ......+|+.|+|||++.+    ..++.++||||||
T Consensus       146 ~NIl~~~~-------~~~kL~DfG~a~~~~~~~~~~--------~~~~~~~t~~y~aPE~~~~----~~~~~~~Di~slG  206 (327)
T 3lzb_A          146 RNVLVKTP-------QHVKITDFGLAKLLGAEEKEY--------HAEGGKVPIKWMALESILH----RIYTHQSDVWSYG  206 (327)
T ss_dssp             GGEEEEET-------TEEEECCTTC------------------------CCCGGGSCHHHHHH----CCCCHHHHHHHHH
T ss_pred             HHEEEcCC-------CCEEEccCcceeEccCccccc--------cccCCCccccccCHHHHcC----CCCChHHHHHHHH
Confidence            99999877       469999999998764432211        1122357889999999987    6789999999999


Q ss_pred             HHHHHHHh-CCCCCCCCCHHHHHHHHHcCCCCCcchHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccC
Q 003185          736 CLLLELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEEN  814 (840)
Q Consensus       736 vIL~ELLT-G~~PF~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L~dLI~rCL~~D  814 (840)
                      |++|||++ |..||.+....++...+........+.                           ..+..+.+||.+||..|
T Consensus       207 ~il~ell~~g~~p~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~l~~li~~~l~~d  259 (327)
T 3lzb_A          207 VTVWELMTFGSKPYDGIPASEISSILEKGERLPQPP---------------------------ICTIDVYMIMRKCWMID  259 (327)
T ss_dssp             HHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCCCCCT---------------------------TBCHHHHHHHHHHTCSS
T ss_pred             HHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCCCCCc---------------------------cCCHHHHHHHHHHcCCC
Confidence            99999999 999999988888777777664433321                           12457899999999999


Q ss_pred             CCCCCCHHHHHHHHHhhcC
Q 003185          815 PTERPTAGDLYEMFVARTS  833 (840)
Q Consensus       815 P~eRPSa~ELLehLe~l~~  833 (840)
                      |.+|||+.+|++.|+.+..
T Consensus       260 p~~Rps~~ell~~L~~~~~  278 (327)
T 3lzb_A          260 ADSRPKFRELIIEFSKMAR  278 (327)
T ss_dssp             GGGSCCHHHHHHHHHHHHT
T ss_pred             hhHCcCHHHHHHHHHHHHh
Confidence            9999999999999998864


No 121
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00  E-value=1.9e-40  Score=360.65  Aligned_cols=265  Identities=22%  Similarity=0.355  Sum_probs=213.3

Q ss_pred             CCCCCceeeeeecccCceEEEEEEEC---------CeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhC-CCCCcc
Q 003185          502 GSFPSLSSCDEAGKSVSSSLFRCKFG---------SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIV  571 (840)
Q Consensus       502 ~~~~~y~i~~~LG~G~fG~Vy~a~~~---------~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L-~HpNIV  571 (840)
                      ...++|++.+.||+|+||.||+|.+.         +..||+|+....   ......+    .+.+|+.+++++ +||||+
T Consensus        32 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~----~~~~E~~~l~~l~~hp~iv  104 (334)
T 2pvf_A           32 FPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD---ATEKDLS----DLVSEMEMMKMIGKHKNII  104 (334)
T ss_dssp             CCGGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTT---CCHHHHH----HHHHHHHHHHHHCCCTTBC
T ss_pred             CCHhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccC---CcHHHHH----HHHHHHHHHHHhhcCCCEe
Confidence            45578999999999999999999863         457899985422   2223333    348999999999 899999


Q ss_pred             eeeeEEecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhcc-----------CCCCCCHHHHHHHHHHHHHHH
Q 003185          572 EMYGHKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSET-----------GEKHVSVKLALFIAQDVAAAL  640 (840)
Q Consensus       572 ~l~g~~~~~~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~-----------~~~~ls~~~~~~Ia~QIa~AL  640 (840)
                      ++++++......              ++||||+++|+|.+++......           ....+++..++.++.||+.||
T Consensus       105 ~~~~~~~~~~~~--------------~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL  170 (334)
T 2pvf_A          105 NLLGACTQDGPL--------------YVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGM  170 (334)
T ss_dssp             CEEEEECSSSCC--------------EEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHH
T ss_pred             eEEEEEccCCce--------------EEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHH
Confidence            999999766543              9999999999999999852110           123489999999999999999


Q ss_pred             HHHHhCCeecccCCCCcEEEecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhccc
Q 003185          641 VELHSKHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMH  720 (840)
Q Consensus       641 ~yLHs~gIVHRDLKPeNILLd~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~  720 (840)
                      .|||++||+||||||+|||++.+       +.+||+|||+++.........        ......+|+.|+|||++.+  
T Consensus       171 ~~LH~~~ivH~Dlkp~NIll~~~-------~~~kL~Dfg~~~~~~~~~~~~--------~~~~~~~~~~y~aPE~~~~--  233 (334)
T 2pvf_A          171 EYLASQKCIHRDLAARNVLVTEN-------NVMKIADFGLARDINNIDYYK--------KTTNGRLPVKWMAPEALFD--  233 (334)
T ss_dssp             HHHHHTTEECSCCSGGGEEECTT-------CCEEECCCTTCEECTTTSSEE--------CCSCCCCCGGGCCHHHHHH--
T ss_pred             HHHHhCCeeCCCCccceEEEcCC-------CCEEEcccccccccccccccc--------ccCCCCcccceeChHHhcC--
Confidence            99999999999999999999877       469999999998665422110        0122357889999999986  


Q ss_pred             CCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHcCCCCCcchHHhhhccCccccccccCCCCCCchhhhhh
Q 003185          721 KPNLYGLEVDIWSYGCLLLELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELET  799 (840)
Q Consensus       721 ~~~~~s~kSDVWSLGvIL~ELLT-G~~PF~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  799 (840)
                        ..++.++|||||||++|+|++ |..||.+....++...+..+..+..+.                           ..
T Consensus       234 --~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~  284 (334)
T 2pvf_A          234 --RVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPA---------------------------NC  284 (334)
T ss_dssp             --CEECHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHHTCCCCCCT---------------------------TC
T ss_pred             --CCcChHHHHHHHHHHHHHHHhCCCCCcCcCCHHHHHHHHhcCCCCCCCc---------------------------cC
Confidence              568899999999999999999 999999998888887777665433321                           12


Q ss_pred             HHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhcC
Q 003185          800 LSFLVDVFRRCTEENPTERPTAGDLYEMFVARTS  833 (840)
Q Consensus       800 s~~L~dLI~rCL~~DP~eRPSa~ELLehLe~l~~  833 (840)
                      +..+.+||.+||..||.+|||+.+|+++|+.+..
T Consensus       285 ~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~~  318 (334)
T 2pvf_A          285 TNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILT  318 (334)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence            4578999999999999999999999999998864


No 122
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00  E-value=7e-41  Score=359.88  Aligned_cols=276  Identities=24%  Similarity=0.278  Sum_probs=198.7

Q ss_pred             CCCceeeeeecccCceEEEEEEE--CCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeEEecCC
Q 003185          504 FPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK  581 (840)
Q Consensus       504 ~~~y~i~~~LG~G~fG~Vy~a~~--~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~l~g~~~~~~  581 (840)
                      +++|++.+.||+|+||.||+|++  .+..||+|++....   .....    +.+.+|+.+|++|+|||||++++++....
T Consensus         5 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~---~~~~~----~~~~~E~~~l~~l~hpniv~~~~~~~~~~   77 (332)
T 3qd2_B            5 LTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPN---RELAR----EKVMREVKALAKLEHPGIVRYFNAWLETP   77 (332)
T ss_dssp             HHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCS---TTTHH----HHHHHHHHHHTSCCCTTBCCEEEEEEECC
T ss_pred             hhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCC---chhHH----HHHHHHHHHHHhCCCCCEeeEEEEEEEec
Confidence            56799999999999999999998  57889999976432   11222    34489999999999999999999987543


Q ss_pred             CCC-------------------------------------------CCCCCCccccceEEEEEeccCCCCHHHHHHHHhc
Q 003185          582 WLP-------------------------------------------SADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSE  618 (840)
Q Consensus       582 ~~p-------------------------------------------~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~  618 (840)
                      ...                                           .............++||||+++++|.+++...  
T Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~--  155 (332)
T 3qd2_B           78 PEKWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRR--  155 (332)
T ss_dssp             SCHHHHHHHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTC--
T ss_pred             cchhhhhhhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcc--
Confidence            200                                           00000011223479999999999999999852  


Q ss_pred             cCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCCCcEEEecccccCCCCCeEEEeecCCcccccccccccccc--cC
Q 003185          619 TGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIA--HR  696 (840)
Q Consensus       619 ~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKPeNILLd~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~--~~  696 (840)
                      ......++..++.++.||+.||.|||++||+||||||+||||+.+       +.+||+|||+++............  ..
T Consensus       156 ~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~-------~~~kL~DfG~a~~~~~~~~~~~~~~~~~  228 (332)
T 3qd2_B          156 CSLEDREHGVCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMD-------DVVKVGDFGLVTAMDQDEEEQTVLTPMP  228 (332)
T ss_dssp             CSGGGSCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTT-------CCEEECCCTTCEECSCC-----------
T ss_pred             cCccchhhHHHHHHHHHHHHHHHHHHhCCeeecCCCcccEEEeCC-------CCEEEeecCcccccccchhhcccccccc
Confidence            222345677899999999999999999999999999999999877       469999999998765432111000  00


Q ss_pred             CCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCcchHHhhhc
Q 003185          697 GIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALG  776 (840)
Q Consensus       697 ~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLGvIL~ELLTG~~PF~~~~~~el~~~I~~~~~p~l~~~l~~~~  776 (840)
                      .........||+.|+|||++.+    ..++.++|||||||++|||++|..|+.  ........+.....+          
T Consensus       229 ~~~~~~~~~gt~~y~aPE~~~~----~~~~~~~Di~slG~il~el~~~~~~~~--~~~~~~~~~~~~~~~----------  292 (332)
T 3qd2_B          229 AYATHTGQVGTKLYMSPEQIHG----NNYSHKVDIFSLGLILFELLYSFSTQM--ERVRIITDVRNLKFP----------  292 (332)
T ss_dssp             ---CCCSCC-CGGGSCHHHHHC----CCCCTHHHHHHHHHHHHHHHSCCCCHH--HHHHHHHHHHTTCCC----------
T ss_pred             ccccccccCCCcCccChHHhcC----CCCcchhhHHHHHHHHHHHHHcCCChh--HHHHHHHHhhccCCC----------
Confidence            0111234579999999999986    678999999999999999999877652  122223333332221          


Q ss_pred             cCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 003185          777 SCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAGDLYEMF  828 (840)
Q Consensus       777 ~~~~~~~~~~~~~~~~~~~~~~~s~~L~dLI~rCL~~DP~eRPSa~ELLehL  828 (840)
                                       ......++.+.+||.+||+.||.+|||+.++++|.
T Consensus       293 -----------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~  327 (332)
T 3qd2_B          293 -----------------LLFTQKYPQEHMMVQDMLSPSPTERPEATDIIENA  327 (332)
T ss_dssp             -----------------HHHHHHCHHHHHHHHHHHCSSGGGSCCHHHHHHST
T ss_pred             -----------------cccccCChhHHHHHHHHccCCCCcCCCHHHHhhch
Confidence                             11222345679999999999999999999999984


No 123
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00  E-value=5.4e-40  Score=348.70  Aligned_cols=271  Identities=16%  Similarity=0.166  Sum_probs=210.9

Q ss_pred             CCCCCceeeeeecccCceEEEEEEE--CCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhC-CCCCcceeeeEEe
Q 003185          502 GSFPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEMYGHKI  578 (840)
Q Consensus       502 ~~~~~y~i~~~LG~G~fG~Vy~a~~--~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L-~HpNIV~l~g~~~  578 (840)
                      ..-++|++.+.||+|+||.||+|.+  .+..||+|+......      .+    .+.+|+.+++.+ +|+||+++++++.
T Consensus         7 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~------~~----~~~~e~~~~~~l~~~~~i~~~~~~~~   76 (298)
T 1csn_A            7 VVGVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSD------AP----QLRDEYRTYKLLAGCTGIPNVYYFGQ   76 (298)
T ss_dssp             EETTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTT------SC----CHHHHHHHHHHTTTCTTCCCEEEEEE
T ss_pred             ccccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCCc------cH----HHHHHHHHHHHHhcCCCCCeEEeecC
Confidence            3456799999999999999999995  788999998653221      11    238899999999 6999999999987


Q ss_pred             cCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCCCcE
Q 003185          579 SSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENI  658 (840)
Q Consensus       579 ~~~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKPeNI  658 (840)
                      ...              ..++||||+ +++|.+++..    ....+++..++.++.||+.||.|||++||+||||||+||
T Consensus        77 ~~~--------------~~~lv~e~~-~~~L~~~l~~----~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~NI  137 (298)
T 1csn_A           77 EGL--------------HNVLVIDLL-GPSLEDLLDL----CGRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNF  137 (298)
T ss_dssp             ETT--------------EEEEEEECC-CCBHHHHHHH----TTTCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGE
T ss_pred             CCc--------------eeEEEEEec-CCCHHHHHHH----hccCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHE
Confidence            655              359999999 8999999986    234699999999999999999999999999999999999


Q ss_pred             EEecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHHHHH
Q 003185          659 LIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLL  738 (840)
Q Consensus       659 LLd~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLGvIL  738 (840)
                      |++.++.  .....+||+|||+++..........   ..........||+.|+|||++.+    ..++.++|||||||++
T Consensus       138 l~~~~~~--~~~~~~kl~Dfg~~~~~~~~~~~~~---~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~~Di~slG~il  208 (298)
T 1csn_A          138 LIGRPNS--KNANMIYVVDFGMVKFYRDPVTKQH---IPYREKKNLSGTARYMSINTHLG----REQSRRDDLEALGHVF  208 (298)
T ss_dssp             EECCSSS--TTTTCEEECCCTTCEESBCTTTCCB---CCCCCCCCCCSCTTTCCHHHHTT----CCCCHHHHHHHHHHHH
T ss_pred             EeccCCC--CCCCeEEEEECcccccccccccccc---ccccCccCCCCCcccCCchhhcC----CCCChHHHHHHHHHHH
Confidence            9987632  2335699999999987654322110   01112344579999999999976    6689999999999999


Q ss_pred             HHHHhCCCCCCCC---CHHHHHHHHHcCCC-CCcchHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccC
Q 003185          739 LELLTLQVPYMGL---SELEIHDLIQMGKR-PRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEEN  814 (840)
Q Consensus       739 ~ELLTG~~PF~~~---~~~el~~~I~~~~~-p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L~dLI~rCL~~D  814 (840)
                      |||++|+.||.+.   ...+....+..... +..+.                        .....++.+.+||.+||..|
T Consensus       209 ~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~~l~~li~~~l~~d  264 (298)
T 1csn_A          209 MYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPLRE------------------------LCAGFPEEFYKYMHYARNLA  264 (298)
T ss_dssp             HHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSCHHH------------------------HTTTSCHHHHHHHHHHHHCC
T ss_pred             HHHHcCCCCcchhhccccHHHHHHHHhhccCccHHH------------------------HHhhCcHHHHHHHHHHhcCC
Confidence            9999999999874   33444444433211 11111                        11123568999999999999


Q ss_pred             CCCCCCHHHHHHHHHhhcCC
Q 003185          815 PTERPTAGDLYEMFVARTSS  834 (840)
Q Consensus       815 P~eRPSa~ELLehLe~l~~~  834 (840)
                      |.+||++++|++.|+.+...
T Consensus       265 p~~RP~~~~l~~~l~~~~~~  284 (298)
T 1csn_A          265 FDATPDYDYLQGLFSKVLER  284 (298)
T ss_dssp             TTCCCCHHHHHHHHHHHHHH
T ss_pred             cccCCCHHHHHHHHHHHHHh
Confidence            99999999999999987643


No 124
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00  E-value=1.7e-40  Score=367.25  Aligned_cols=255  Identities=25%  Similarity=0.282  Sum_probs=193.6

Q ss_pred             CCCCCceeeeeecccCceEEEEEEE--CCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeEEec
Q 003185          502 GSFPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKIS  579 (840)
Q Consensus       502 ~~~~~y~i~~~LG~G~fG~Vy~a~~--~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~l~g~~~~  579 (840)
                      ...++|++.+.||+|+||.||+|+.  .+..||+|++.....  .   .    ..+.+|+.+++.++||||+++++++..
T Consensus        17 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~---~----~~~~~E~~~l~~l~hpniv~~~~~~~~   87 (361)
T 3uc3_A           17 HDSDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAA--I---D----ENVQREIINHRSLRHPNIVRFKEVILT   87 (361)
T ss_dssp             CCTTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTT--S---C----HHHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred             CCCCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCcc--c---c----HHHHHHHHHHHhCCCCCCCcEEEEEee
Confidence            4568999999999999999999998  577899998753221  1   1    234899999999999999999999986


Q ss_pred             CCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCCCcEE
Q 003185          580 SKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENIL  659 (840)
Q Consensus       580 ~~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKPeNIL  659 (840)
                      ...              .+|||||+++|+|.+++..     ...+++..++.++.||+.||.|||++||+||||||+|||
T Consensus        88 ~~~--------------~~lv~e~~~~~~L~~~l~~-----~~~~~~~~~~~i~~ql~~~L~~LH~~~ivH~Dlkp~Nil  148 (361)
T 3uc3_A           88 PTH--------------LAIIMEYASGGELYERICN-----AGRFSEDEARFFFQQLLSGVSYCHSMQICHRDLKLENTL  148 (361)
T ss_dssp             SSE--------------EEEEEECCCSCBHHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHHTTCCSCCCCGGGEE
T ss_pred             CCE--------------EEEEEEeCCCCCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEE
Confidence            553              5999999999999999976     246999999999999999999999999999999999999


Q ss_pred             EecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCC-CchhhHHHHHHHH
Q 003185          660 IDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLY-GLEVDIWSYGCLL  738 (840)
Q Consensus       660 Ld~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~-s~kSDVWSLGvIL  738 (840)
                      ++.++.     ..+||+|||+++.......           .....||+.|+|||++.+    ..+ +.++|||||||++
T Consensus       149 l~~~~~-----~~~kl~Dfg~a~~~~~~~~-----------~~~~~gt~~y~aPE~~~~----~~~~~~~~DiwslG~il  208 (361)
T 3uc3_A          149 LDGSPA-----PRLKICDFGYSKSSVLHSQ-----------PKSTVGTPAYIAPEVLLR----QEYDGKIADVWSCGVTL  208 (361)
T ss_dssp             ECSSSS-----CCEEECCCCCC--------------------------CTTSCHHHHHC----SSCCHHHHHHHHHHHHH
T ss_pred             EcCCCC-----ceEEEeecCccccccccCC-----------CCCCcCCCCcCChhhhcC----CCCCCCeeeeehhHHHH
Confidence            986632     5699999999974322111           133469999999999986    344 4459999999999


Q ss_pred             HHHHhCCCCCCCCCH----HHHHHHHHcCCCCCcchHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccC
Q 003185          739 LELLTLQVPYMGLSE----LEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEEN  814 (840)
Q Consensus       739 ~ELLTG~~PF~~~~~----~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L~dLI~rCL~~D  814 (840)
                      |+|++|+.||.+...    ......+..... .++.                         ....++.+.+||.+||..|
T Consensus       209 ~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~-~~~~-------------------------~~~~s~~~~~li~~~L~~d  262 (361)
T 3uc3_A          209 YVMLVGAYPFEDPEEPRDYRKTIQRILSVKY-SIPD-------------------------DIRISPECCHLISRIFVAD  262 (361)
T ss_dssp             HHHHHSSCSCC----CCCHHHHHHHHHTTCC-CCCT-------------------------TSCCCHHHHHHHHHHSCSC
T ss_pred             HHHHhCCCCCCCCccHHHHHHHHHHHhcCCC-CCCC-------------------------cCCCCHHHHHHHHHHccCC
Confidence            999999999976543    233333332211 1110                         0113457899999999999


Q ss_pred             CCCCCCHHHHHHHHHh
Q 003185          815 PTERPTAGDLYEMFVA  830 (840)
Q Consensus       815 P~eRPSa~ELLehLe~  830 (840)
                      |.+|||+.||++|.+-
T Consensus       263 P~~Rps~~ell~hp~f  278 (361)
T 3uc3_A          263 PATRISIPEIKTHSWF  278 (361)
T ss_dssp             TTTSCCHHHHHTSHHH
T ss_pred             hhHCcCHHHHHhCcch
Confidence            9999999999999664


No 125
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00  E-value=1.7e-40  Score=377.27  Aligned_cols=296  Identities=18%  Similarity=0.174  Sum_probs=194.3

Q ss_pred             CCCceeeeeecccCceEEEEEEE--CCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeEEecCC
Q 003185          504 FPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK  581 (840)
Q Consensus       504 ~~~y~i~~~LG~G~fG~Vy~a~~--~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~l~g~~~~~~  581 (840)
                      -++|++.+.||+|+||.||+|.+  .+..||+|++..  ........+    ++.+|+.+|+.|+|||||++++++....
T Consensus        52 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~--~~~~~~~~~----~~~~E~~~l~~l~h~niv~l~~~~~~~~  125 (458)
T 3rp9_A           52 PDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILR--VFEDLIDCK----RILREIAILNRLNHDHVVKVLDIVIPKD  125 (458)
T ss_dssp             CTTEEECCC-------CEEEEEECC--CEEEEEEECS--TTSSHHHHH----HHHHHHHHHHHCCCTTBCCEEEECCCSC
T ss_pred             CCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEech--hhcCHHHHH----HHHHHHHHHHhCCCCCCCceEEEEecCC
Confidence            47899999999999999999987  577899998632  222333333    4489999999999999999999986543


Q ss_pred             CCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCCCcEEEe
Q 003185          582 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID  661 (840)
Q Consensus       582 ~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKPeNILLd  661 (840)
                      ..         .....||||||+. ++|.+++..     ...+++..++.++.||+.||.|||++|||||||||+||||+
T Consensus       126 ~~---------~~~~~~lv~e~~~-~~L~~~~~~-----~~~l~~~~~~~~~~qi~~aL~~LH~~~iiHrDlKp~NILl~  190 (458)
T 3rp9_A          126 VE---------KFDELYVVLEIAD-SDFKKLFRT-----PVYLTELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCLVN  190 (458)
T ss_dssp             TT---------TCCCEEEEECCCS-EEHHHHHHS-----SCCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEEC
T ss_pred             cc---------cCceEEEEEeccc-cchhhhccc-----CCCCCHHHHHHHHHHHHHHHHHHHhCCcCCCCCChhhEEEC
Confidence            11         2235799999985 699999874     35699999999999999999999999999999999999998


Q ss_pred             cccccCCCCCeEEEeecCCccccccccccccc-----------------ccCCCCCCCcccCCCcccchhhhhcccCCCC
Q 003185          662 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCI-----------------AHRGIPAPDVCVGTPRWMAPEVLRAMHKPNL  724 (840)
Q Consensus       662 ~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~-----------------~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~  724 (840)
                      .+       +.+||+|||+|+...........                 ...........+||+.|+|||++..   ...
T Consensus       191 ~~-------~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~---~~~  260 (458)
T 3rp9_A          191 QD-------CSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILL---QEN  260 (458)
T ss_dssp             TT-------CCEEECCCTTCBCTTSCTTCCCCCC---------------------------CCCTTCCHHHHTT---CCC
T ss_pred             CC-------CCEeecccccchhccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhC---CCC
Confidence            77       46999999999876532211000                 0000011234578999999998753   256


Q ss_pred             CCchhhHHHHHHHHHHHHh-----------CCCCCCCCCH--------------------HHHHHHHHcCCCCCcchHHh
Q 003185          725 YGLEVDIWSYGCLLLELLT-----------LQVPYMGLSE--------------------LEIHDLIQMGKRPRLTDELE  773 (840)
Q Consensus       725 ~s~kSDVWSLGvIL~ELLT-----------G~~PF~~~~~--------------------~el~~~I~~~~~p~l~~~l~  773 (840)
                      ++.++||||||||||||++           |+++|.+.+.                    .+.+..|.........+.+.
T Consensus       261 ~~~~~DiwSlG~il~elltg~~~~~~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~  340 (458)
T 3rp9_A          261 YTEAIDVWSIGCIFAELLNMIKENVAYHADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIE  340 (458)
T ss_dssp             CCTHHHHHHHHHHHHHHHTTSTTTCSSGGGCCCSCC--------------------CHHHHHHHHHHHHHHCCCCHHHHH
T ss_pred             CCcHhHHHHHHHHHHHHHHhccccccccccccccCCCCccccccccccccccccccccCCHHHHHHHHHHcCCCCHHHHh
Confidence            8999999999999999999           7777766542                    12222222211111111111


Q ss_pred             hhccCcccccccc---CCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHHHh
Q 003185          774 ALGSCHEHEVAQS---GSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAGDLYEMFVA  830 (840)
Q Consensus       774 ~~~~~~~~~~~~~---~~~~~~~~~~~~~s~~L~dLI~rCL~~DP~eRPSa~ELLehLe~  830 (840)
                      .........+...   .............+..+.+||.+||..||.+|||++|+++|..-
T Consensus       341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~t~~e~L~Hp~f  400 (458)
T 3rp9_A          341 ALEKEDAKRYIRIFPKREGTDLAERFPASSADAIHLLKRMLVFNPNKRITINECLAHPFF  400 (458)
T ss_dssp             TSSCHHHHHHHTTSCCCCCCCGGGGSTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGG
T ss_pred             hcCCHHHHHHHHhcCCCCCCCHHHHCCCCCHHHHHHHHHHhccCccccCCHHHHhcCHhh
Confidence            1100000000000   00111122233446789999999999999999999999999553


No 126
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00  E-value=2.4e-40  Score=354.81  Aligned_cols=271  Identities=25%  Similarity=0.410  Sum_probs=203.7

Q ss_pred             CCCCCCceeeeeecccCceEEEEEEE--CCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeEEe
Q 003185          501 PGSFPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKI  578 (840)
Q Consensus       501 p~~~~~y~i~~~LG~G~fG~Vy~a~~--~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~l~g~~~  578 (840)
                      ...+++|++.+.||+|+||.||+|..  .+..+|+|++..... .......    .+.+|+.++++++||||+++++++.
T Consensus        28 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~----~~~~E~~~l~~l~h~~i~~~~~~~~  102 (310)
T 2wqm_A           28 YNTLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDL-MDAKARA----DCIKEIDLLKQLNHPNVIKYYASFI  102 (310)
T ss_dssp             TSSGGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSS-CCHHHHH----HHHHHHHHHHTCCCTTBCCEEEEEE
T ss_pred             cccccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhc-cCHHHHH----HHHHHHHHHHhCCCCCEeeEEEEEE
Confidence            35678999999999999999999997  678899998754322 2223333    4489999999999999999999998


Q ss_pred             cCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCCCcE
Q 003185          579 SSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENI  658 (840)
Q Consensus       579 ~~~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKPeNI  658 (840)
                      ....              .++||||+++++|.+++..... ....+++..++.++.||+.||.|||++||+||||||+||
T Consensus       103 ~~~~--------------~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NI  167 (310)
T 2wqm_A          103 EDNE--------------LNIVLELADAGDLSRMIKHFKK-QKRLIPERTVWKYFVQLCSALEHMHSRRVMHRDIKPANV  167 (310)
T ss_dssp             ETTE--------------EEEEEECCCSCBHHHHHHHHHH-TTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGE
T ss_pred             cCCc--------------EEEEEecCCCCCHHHHHHHhcc-cccCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCcHHHE
Confidence            6553              5999999999999999976433 235689999999999999999999999999999999999


Q ss_pred             EEecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHHHHH
Q 003185          659 LIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLL  738 (840)
Q Consensus       659 LLd~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLGvIL  738 (840)
                      |++.+       +.+||+|||++.........          .....||+.|+|||++.+    ..++.++||||||+++
T Consensus       168 l~~~~-------~~~kl~Dfg~~~~~~~~~~~----------~~~~~~~~~y~aPE~~~~----~~~~~~~Dv~slG~il  226 (310)
T 2wqm_A          168 FITAT-------GVVKLGDLGLGRFFSSKTTA----------AHSLVGTPYYMSPERIHE----NGYNFKSDIWSLGCLL  226 (310)
T ss_dssp             EECTT-------SCEEECCC----------------------------CCSSCCHHHHTT----CCCCHHHHHHHHHHHH
T ss_pred             EEcCC-------CCEEEEeccceeeecCCCcc----------ccccCCCeeEeChHHhCC----CCCCchhhHHHHHHHH
Confidence            99876       46999999999765432111          123468999999999976    6789999999999999


Q ss_pred             HHHHhCCCCCCCC--CHHHHHHHHHcCCCCCcchHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCC
Q 003185          739 LELLTLQVPYMGL--SELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPT  816 (840)
Q Consensus       739 ~ELLTG~~PF~~~--~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L~dLI~rCL~~DP~  816 (840)
                      |+|++|..||.+.  ....+...+.....+.+..                          ...+..+.+||.+||..||.
T Consensus       227 ~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~l~~li~~~l~~dp~  280 (310)
T 2wqm_A          227 YEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPS--------------------------DHYSEELRQLVNMCINPDPE  280 (310)
T ss_dssp             HHHHHSSCTTC---CCHHHHHHHHHTTCSCCCCT--------------------------TTSCHHHHHHHHHHTCSSGG
T ss_pred             HHHHhCCCCCcccchhHHHHHHHhhcccCCCCcc--------------------------cccCHHHHHHHHHHcCCChh
Confidence            9999999999654  3344555555443322210                          12345799999999999999


Q ss_pred             CCCCHHHHHHHHHhhcCCCCCC
Q 003185          817 ERPTAGDLYEMFVARTSSSISS  838 (840)
Q Consensus       817 eRPSa~ELLehLe~l~~~~~s~  838 (840)
                      +|||+.+|+++|+.+......+
T Consensus       281 ~Rps~~~il~~l~~l~~~~~~~  302 (310)
T 2wqm_A          281 KRPDVTYVYDVAKRMHACTASS  302 (310)
T ss_dssp             GSCCHHHHHHHHHHHHHHHC--
T ss_pred             hCCCHHHHHHHHHHHHHhhhhh
Confidence            9999999999999987654443


No 127
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00  E-value=4.9e-41  Score=381.10  Aligned_cols=255  Identities=24%  Similarity=0.328  Sum_probs=203.3

Q ss_pred             CCCCCceeeeeecccCceEEEEEEE--CCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeEEec
Q 003185          502 GSFPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKIS  579 (840)
Q Consensus       502 ~~~~~y~i~~~LG~G~fG~Vy~a~~--~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~l~g~~~~  579 (840)
                      ..+++|++.+.||+|+||.||+|..  .+..||+|++...... .....    ..+.+|+.+|+.++||||+++++++..
T Consensus       145 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~----~~~~~e~~~l~~l~h~~iv~l~~~~~~  219 (446)
T 4ejn_A          145 VTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIV-AKDEV----AHTLTENRVLQNSRHPFLTALKYSFQT  219 (446)
T ss_dssp             CCGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC------------------CCCCCSCTTSCCEEEEEEE
T ss_pred             CChHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhh-hhHHH----HHHHHHHHHHHhCCCCeEeeEEEEEee
Confidence            4678899999999999999999997  5778999997643211 11122    234889999999999999999999986


Q ss_pred             CCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHh-CCeecccCCCCcE
Q 003185          580 SKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHS-KHIMHRDIKSENI  658 (840)
Q Consensus       580 ~~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs-~gIVHRDLKPeNI  658 (840)
                      ...              .||||||+++|+|..++..     ...+++..++.++.||+.||+|||+ +||+||||||+||
T Consensus       220 ~~~--------------~~lv~e~~~~~~L~~~l~~-----~~~~~~~~~~~~~~qi~~aL~~LH~~~giiHrDlkp~NI  280 (446)
T 4ejn_A          220 HDR--------------LCFVMEYANGGELFFHLSR-----ERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENL  280 (446)
T ss_dssp             TTE--------------EEEEECCCSSCBHHHHHHH-----HSCCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCCCGGGE
T ss_pred             CCE--------------EEEEEeeCCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHhhcCCEEECCCCHHHE
Confidence            653              5999999999999999976     2568999999999999999999998 9999999999999


Q ss_pred             EEecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHHHHH
Q 003185          659 LIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLL  738 (840)
Q Consensus       659 LLd~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLGvIL  738 (840)
                      ||+.+       +.+||+|||+++.......          ......||+.|+|||++.+    ..++.++|||||||+|
T Consensus       281 ll~~~-------~~~kl~DFG~a~~~~~~~~----------~~~~~~gt~~y~aPE~~~~----~~~~~~~DiwslG~il  339 (446)
T 4ejn_A          281 MLDKD-------GHIKITDFGLCKEGIKDGA----------TMKTFCGTPEYLAPEVLED----NDYGRAVDWWGLGVVM  339 (446)
T ss_dssp             EECSS-------SCEEECCCCCCCTTCC---------------CCSSSCGGGCCHHHHHT----SCCCTHHHHHHHHHHH
T ss_pred             EECCC-------CCEEEccCCCceeccCCCc----------ccccccCCccccCHhhcCC----CCCCCccchhhhHHHH
Confidence            99877       4699999999975432211          1234579999999999986    6789999999999999


Q ss_pred             HHHHhCCCCCCCCCHHHHHHHHHcCCCCCcchHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCC
Q 003185          739 LELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTER  818 (840)
Q Consensus       739 ~ELLTG~~PF~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L~dLI~rCL~~DP~eR  818 (840)
                      |||++|+.||.+.+..++...+...... ++.                           ..++.+.+||.+||..||.+|
T Consensus       340 ~ell~g~~Pf~~~~~~~~~~~i~~~~~~-~p~---------------------------~~~~~~~~li~~~L~~dP~~R  391 (446)
T 4ejn_A          340 YEMMCGRLPFYNQDHEKLFELILMEEIR-FPR---------------------------TLGPEAKSLLSGLLKKDPKQR  391 (446)
T ss_dssp             HHHHHSSCSSCCSSHHHHHHHHHHCCCC-CCT---------------------------TSCHHHHHHHHHHTCSSTTTS
T ss_pred             HHHhhCCCCCCCCCHHHHHHHHHhCCCC-CCc---------------------------cCCHHHHHHHHHHcccCHHHh
Confidence            9999999999999888888777655321 111                           124578999999999999999


Q ss_pred             C-----CHHHHHHHHH
Q 003185          819 P-----TAGDLYEMFV  829 (840)
Q Consensus       819 P-----Sa~ELLehLe  829 (840)
                      |     +++++++|..
T Consensus       392 ~~~~~~t~~ell~hp~  407 (446)
T 4ejn_A          392 LGGGSEDAKEIMQHRF  407 (446)
T ss_dssp             TTCSTTTHHHHHTSGG
T ss_pred             CCCCCCCHHHHHhCcc
Confidence            9     9999999854


No 128
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00  E-value=1.4e-40  Score=381.48  Aligned_cols=261  Identities=26%  Similarity=0.315  Sum_probs=212.5

Q ss_pred             CCCCceeeeeecccCceEEEEEEE--CCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeEEecC
Q 003185          503 SFPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISS  580 (840)
Q Consensus       503 ~~~~y~i~~~LG~G~fG~Vy~a~~--~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~l~g~~~~~  580 (840)
                      ..++|++.+.||+|+||+||+|.+  .+..||+|++........  .    ...+.+|+.+|++++|||||++++++...
T Consensus        20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~--~----~~~~~~E~~~l~~l~hpniv~~~~~~~~~   93 (486)
T 3mwu_A           20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNK--D----TSTILREVELLKKLDHPNIMKLFEILEDS   93 (486)
T ss_dssp             HHHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCS--C----HHHHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred             hhcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccch--H----HHHHHHHHHHHHhCCCCCcCeEEEEEEcC
Confidence            346899999999999999999998  578899999754321111  1    23448999999999999999999999865


Q ss_pred             CCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCCCcEEE
Q 003185          581 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILI  660 (840)
Q Consensus       581 ~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKPeNILL  660 (840)
                      .              ..|+||||+.+++|.+++..     ...+++..++.++.||+.||.|||++||+||||||+|||+
T Consensus        94 ~--------------~~~lv~e~~~~~~L~~~~~~-----~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~  154 (486)
T 3mwu_A           94 S--------------SFYIVGELYTGGELFDEIIK-----RKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILL  154 (486)
T ss_dssp             S--------------EEEEEECCCCSCBHHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE
T ss_pred             C--------------EEEEEEEcCCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEE
Confidence            5              35999999999999999876     2569999999999999999999999999999999999999


Q ss_pred             ecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHHHHHHH
Q 003185          661 DLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLE  740 (840)
Q Consensus       661 d~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLGvIL~E  740 (840)
                      +..+    ..+.+||+|||+++.......           ....+||+.|+|||++.+     .++.++|||||||++|+
T Consensus       155 ~~~~----~~~~~kl~Dfg~a~~~~~~~~-----------~~~~~gt~~y~aPE~~~~-----~~~~~~DiwslG~il~~  214 (486)
T 3mwu_A          155 ESKE----KDCDIKIIDFGLSTCFQQNTK-----------MKDRIGTAYYIAPEVLRG-----TYDEKCDVWSAGVILYI  214 (486)
T ss_dssp             SSSS----TTCCEEECSCSCTTTBCCC---------------CCTTGGGGCCGGGGGS-----CCCHHHHHHHHHHHHHH
T ss_pred             ecCC----CCCCEEEEECCcCeECCCCCc-----------cCCCcCCCCCCCHHHhCC-----CCCchhhHHHHHHHHHH
Confidence            7542    235799999999976543211           123469999999999874     48999999999999999


Q ss_pred             HHhCCCCCCCCCHHHHHHHHHcCCCCCcchHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCC
Q 003185          741 LLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPT  820 (840)
Q Consensus       741 LLTG~~PF~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L~dLI~rCL~~DP~eRPS  820 (840)
                      |++|..||.+.+..++...+..+..+....                        .....++.+.+||.+||..||.+|||
T Consensus       215 ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~------------------------~~~~~s~~~~~li~~~L~~dp~~R~t  270 (486)
T 3mwu_A          215 LLSGTPPFYGKNEYDILKRVETGKYAFDLP------------------------QWRTISDDAKDLIRKMLTFHPSLRIT  270 (486)
T ss_dssp             HHHSSCSSCCSSHHHHHHHHHHTCCCSCSG------------------------GGGGSCHHHHHHHHHHTCSSTTTSCC
T ss_pred             HHhCCCCCCCCCHHHHHHHHHhCCCCCCCc------------------------ccCCCCHHHHHHHHHHcCCChhhCcC
Confidence            999999999999988888887764322111                        11233567999999999999999999


Q ss_pred             HHHHHHHHHhhc
Q 003185          821 AGDLYEMFVART  832 (840)
Q Consensus       821 a~ELLehLe~l~  832 (840)
                      +.++++|.+-..
T Consensus       271 ~~~~l~hp~~~~  282 (486)
T 3mwu_A          271 ATQCLEHPWIQK  282 (486)
T ss_dssp             HHHHHHCHHHHH
T ss_pred             HHHHhcCHhhcc
Confidence            999999965443


No 129
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00  E-value=2.3e-40  Score=352.53  Aligned_cols=265  Identities=22%  Similarity=0.318  Sum_probs=207.0

Q ss_pred             CCCCceeeeeecccCceEEEEEEEC---Ce--eEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeEE
Q 003185          503 SFPSLSSCDEAGKSVSSSLFRCKFG---SA--DAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHK  577 (840)
Q Consensus       503 ~~~~y~i~~~LG~G~fG~Vy~a~~~---~~--~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~l~g~~  577 (840)
                      ...+|++.+.||+|+||.||+|.+.   +.  .+|+|+.  .. .......+.    +.+|+.++++++||||+++++++
T Consensus        23 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~--~~-~~~~~~~~~----~~~E~~~l~~l~h~~iv~~~~~~   95 (298)
T 3f66_A           23 SSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSL--NR-ITDIGEVSQ----FLTEGIIMKDFSHPNVLSLLGIC   95 (298)
T ss_dssp             GGEEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEE--TT-CCSHHHHHH----HHHHHHHHHTCCCTTBCCCCEEE
T ss_pred             cceehhhcceeeecCCceEEEEEEecCCCceeEEEEEec--cc-CCCHHHHHH----HHHHHHHHHhCCCCCEeeeeeEE
Confidence            4457999999999999999999863   22  3566654  32 122333333    48999999999999999999987


Q ss_pred             ecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCCCc
Q 003185          578 ISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSEN  657 (840)
Q Consensus       578 ~~~~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKPeN  657 (840)
                      .....             ..++||||+++++|.+++..    ....+++..++.++.||+.||.|||++||+||||||+|
T Consensus        96 ~~~~~-------------~~~~v~e~~~~~~L~~~l~~----~~~~~~~~~~~~i~~ql~~~l~~lH~~~i~H~dikp~N  158 (298)
T 3f66_A           96 LRSEG-------------SPLVVLPYMKHGDLRNFIRN----ETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARN  158 (298)
T ss_dssp             CCSSS-------------CCEEEEECCTTCBHHHHHHC----TTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGG
T ss_pred             EcCCC-------------ceEEEEeCCCCCCHHHHHHh----cccCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchhe
Confidence            64332             24999999999999999964    23568999999999999999999999999999999999


Q ss_pred             EEEecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHHHH
Q 003185          658 ILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCL  737 (840)
Q Consensus       658 ILLd~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLGvI  737 (840)
                      ||++.+       +.+||+|||+++.........      ........||+.|+|||.+.+    ..++.++|||||||+
T Consensus       159 il~~~~-------~~~kl~Dfg~a~~~~~~~~~~------~~~~~~~~~~~~y~aPE~~~~----~~~~~~~Di~slG~i  221 (298)
T 3f66_A          159 CMLDEK-------FTVKVADFGLARDMYDKEYYS------VHNKTGAKLPVKWMALESLQT----QKFTTKSDVWSFGVL  221 (298)
T ss_dssp             EEECTT-------CCEEECSCGGGCCCSCGGGCB------C-----CCBCGGGSCHHHHHH----CCCCHHHHHHHHHHH
T ss_pred             EEECCC-------CCEEECcccccccccccchhc------cccccCCCCCccccChHHhcC----CCCChHHHHHHHHHH
Confidence            999876       469999999998765432211      111233457889999999987    678999999999999


Q ss_pred             HHHHHh-CCCCCCCCCHHHHHHHHHcCCCCCcchHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCC
Q 003185          738 LLELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPT  816 (840)
Q Consensus       738 L~ELLT-G~~PF~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L~dLI~rCL~~DP~  816 (840)
                      +|+|++ |.+||...+..+....+..+..+..+.                           ..+..+.+||.+||..||.
T Consensus       222 l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~l~~li~~~l~~~p~  274 (298)
T 3f66_A          222 LWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPE---------------------------YCPDPLYEVMLKCWHPKAE  274 (298)
T ss_dssp             HHHHHTTSCCSSTTSCTTTHHHHHHTTCCCCCCT---------------------------TCCHHHHHHHHHHTCSSGG
T ss_pred             HHHHHhCCCCCCccCCHHHHHHHHhcCCCCCCCc---------------------------cCCHHHHHHHHHHcCCChh
Confidence            999999 677787777766666666654433221                           1245789999999999999


Q ss_pred             CCCCHHHHHHHHHhhcCCC
Q 003185          817 ERPTAGDLYEMFVARTSSS  835 (840)
Q Consensus       817 eRPSa~ELLehLe~l~~~~  835 (840)
                      +|||+.++++.|+.+....
T Consensus       275 ~Rps~~ell~~L~~~~~~~  293 (298)
T 3f66_A          275 MRPSFSELVSRISAIFSTF  293 (298)
T ss_dssp             GSCCHHHHHHHHHHHHHTS
T ss_pred             hCcCHHHHHHHHHHHHHhh
Confidence            9999999999999987643


No 130
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00  E-value=1.7e-40  Score=378.05  Aligned_cols=260  Identities=25%  Similarity=0.344  Sum_probs=209.7

Q ss_pred             CCCCCceeeeeecccCceEEEEEEECC-eeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeEEecC
Q 003185          502 GSFPSLSSCDEAGKSVSSSLFRCKFGS-ADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISS  580 (840)
Q Consensus       502 ~~~~~y~i~~~LG~G~fG~Vy~a~~~~-~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~l~g~~~~~  580 (840)
                      +..++|++.+.||+|+||.||+|.+.+ ..||+|+....  ...   .+.    +.+|+.+|++|+||||+++++++.. 
T Consensus       181 i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~--~~~---~~~----~~~E~~~l~~l~hp~iv~~~~~~~~-  250 (452)
T 1fmk_A          181 IPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPG--TMS---PEA----FLQEAQVMKKLRHEKLVQLYAVVSE-  250 (452)
T ss_dssp             CCGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTT--SSC---HHH----HHHHHHHHHHCCCTTBCCEEEEECS-
T ss_pred             cChhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccC--CCC---HHH----HHHHHHHHHhCCCCCEeeEEEEEcC-
Confidence            455789999999999999999999854 67999985432  111   223    4899999999999999999999864 


Q ss_pred             CCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCCCcEEE
Q 003185          581 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILI  660 (840)
Q Consensus       581 ~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKPeNILL  660 (840)
                      ..              .+|||||+++|+|.+++...   ....+++..++.++.||+.||+|||++||+||||||+|||+
T Consensus       251 ~~--------------~~iv~e~~~~gsL~~~l~~~---~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~Nill  313 (452)
T 1fmk_A          251 EP--------------IYIVTEYMSKGSLLDFLKGE---TGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILV  313 (452)
T ss_dssp             SS--------------CEEEECCCTTCBHHHHHSHH---HHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE
T ss_pred             Cc--------------eEEEehhhcCCCHHHHHHhc---CCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEE
Confidence            22              39999999999999999752   12458999999999999999999999999999999999999


Q ss_pred             ecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHHHHHHH
Q 003185          661 DLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLE  740 (840)
Q Consensus       661 d~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLGvIL~E  740 (840)
                      +.+       +.+||+|||+++........         ......+|+.|+|||++..    ..++.++|||||||+|||
T Consensus       314 ~~~-------~~~kl~DfG~a~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~----~~~~~~sDvwslG~~l~e  373 (452)
T 1fmk_A          314 GEN-------LVCKVADFGLARLIEDNEYT---------ARQGAKFPIKWTAPEAALY----GRFTIKSDVWSFGILLTE  373 (452)
T ss_dssp             CGG-------GCEEECCCCTTC-----------------------CCGGGSCHHHHHH----CCCCHHHHHHHHHHHHHH
T ss_pred             CCC-------CCEEECCCccceecCCCcee---------cccCCcccccccCHhHHhc----CCCCccccHHhHHHHHHH
Confidence            877       46999999999876432211         1122347889999999986    678999999999999999


Q ss_pred             HHh-CCCCCCCCCHHHHHHHHHcCCCCCcchHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC
Q 003185          741 LLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP  819 (840)
Q Consensus       741 LLT-G~~PF~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L~dLI~rCL~~DP~eRP  819 (840)
                      |++ |..||.+....++...+..+.++..+.                           .+++.+.+||.+||..||.+||
T Consensus       374 l~t~g~~P~~~~~~~~~~~~i~~~~~~~~~~---------------------------~~~~~l~~li~~cl~~dP~~Rp  426 (452)
T 1fmk_A          374 LTTKGRVPYPGMVNREVLDQVERGYRMPCPP---------------------------ECPESLHDLMCQCWRKEPEERP  426 (452)
T ss_dssp             HHTTTCCSSTTCCHHHHHHHHHTTCCCCCCT---------------------------TSCHHHHHHHHHHTCSSGGGSC
T ss_pred             HHhCCCCCCCCCCHHHHHHHHHcCCCCCCCC---------------------------CCCHHHHHHHHHHccCChhhCc
Confidence            999 999999999888888887765543331                           2345789999999999999999


Q ss_pred             CHHHHHHHHHhhcCCC
Q 003185          820 TAGDLYEMFVARTSSS  835 (840)
Q Consensus       820 Sa~ELLehLe~l~~~~  835 (840)
                      |+++|++.|+.+....
T Consensus       427 t~~~l~~~L~~~~~~~  442 (452)
T 1fmk_A          427 TFEYLQAFLEDYFTST  442 (452)
T ss_dssp             CHHHHHHHHHTTTSCS
T ss_pred             CHHHHHHHHHHHhccC
Confidence            9999999999987543


No 131
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00  E-value=6e-41  Score=364.11  Aligned_cols=287  Identities=22%  Similarity=0.267  Sum_probs=211.2

Q ss_pred             CCCCCCCCceeeeeecccCceEEEEEEEC--CeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeE
Q 003185          499 LDPGSFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGH  576 (840)
Q Consensus       499 ~~p~~~~~y~i~~~LG~G~fG~Vy~a~~~--~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~l~g~  576 (840)
                      +....+++|++.+.||+|+||.||+|.+.  +..||+|++...  .......    +.+.+|+.++++++||||++++++
T Consensus        19 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~----~~~~~E~~~l~~l~h~~iv~~~~~   92 (331)
T 4aaa_A           19 LYFQSMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLES--DDDKMVK----KIAMREIKLLKQLRHENLVNLLEV   92 (331)
T ss_dssp             CCCBCGGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESC--SSCHHHH----HHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred             hhhhhhhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecC--CCchHHH----HHHHHHHHHHhhCCCCCEeeEEEE
Confidence            44567899999999999999999999984  778999987433  2222222    334899999999999999999999


Q ss_pred             EecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCCC
Q 003185          577 KISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSE  656 (840)
Q Consensus       577 ~~~~~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKPe  656 (840)
                      +.....              .++||||+++++|..++..     ...+++..++.++.||+.||.|||++||+||||||+
T Consensus        93 ~~~~~~--------------~~lv~e~~~~~~l~~~~~~-----~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~  153 (331)
T 4aaa_A           93 CKKKKR--------------WYLVFEFVDHTILDDLELF-----PNGLDYQVVQKYLFQIINGIGFCHSHNIIHRDIKPE  153 (331)
T ss_dssp             EEETTE--------------EEEEEECCSEEHHHHHHHS-----TTCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGG
T ss_pred             eecCCE--------------EEEEEecCCcchHHHHHhh-----ccCCCHHHHHHHHHHHHHHHHHHHHCCEEccCcChh
Confidence            986553              5999999999888887653     356999999999999999999999999999999999


Q ss_pred             cEEEecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHHH
Q 003185          657 NILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGC  736 (840)
Q Consensus       657 NILLd~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLGv  736 (840)
                      |||++.+       +.+||+|||++.........          .....||+.|+|||++.+   ...++.++|||||||
T Consensus       154 Nil~~~~-------~~~kl~Dfg~~~~~~~~~~~----------~~~~~~t~~y~aPE~~~~---~~~~~~~~Di~slG~  213 (331)
T 4aaa_A          154 NILVSQS-------GVVKLCDFGFARTLAAPGEV----------YDDEVATRWYRAPELLVG---DVKYGKAVDVWAIGC  213 (331)
T ss_dssp             GEEECTT-------SCEEECCCTTC----------------------CCCCCTTCCHHHHTT---CTTCCTHHHHHHHHH
T ss_pred             eEEEcCC-------CcEEEEeCCCceeecCCccc----------cCCCcCCccccCcccccC---CCCcchHHHHHHHHH
Confidence            9999877       46999999999765432211          123468999999999975   236789999999999


Q ss_pred             HHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCcchHHhhhccC---ccccccccCCCCCCchhhhhhHHHHHHHHHHhccc
Q 003185          737 LLLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSC---HEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEE  813 (840)
Q Consensus       737 IL~ELLTG~~PF~~~~~~el~~~I~~~~~p~l~~~l~~~~~~---~~~~~~~~~~~~~~~~~~~~~s~~L~dLI~rCL~~  813 (840)
                      ++|+|++|+.||.+....+....+........+.....+...   .....................++.+.+||.+||+.
T Consensus       214 il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~  293 (331)
T 4aaa_A          214 LVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHI  293 (331)
T ss_dssp             HHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHCGGGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCS
T ss_pred             HHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhccccccccCccccccchhhhcccchhHHHHHHHHHHhcc
Confidence            999999999999998877766665543222222211111000   00000000001111112234567899999999999


Q ss_pred             CCCCCCCHHHHHHHHHh
Q 003185          814 NPTERPTAGDLYEMFVA  830 (840)
Q Consensus       814 DP~eRPSa~ELLehLe~  830 (840)
                      ||.+|||+.||++|..-
T Consensus       294 dP~~Rpt~~ell~hp~f  310 (331)
T 4aaa_A          294 DPDKRPFCAELLHHDFF  310 (331)
T ss_dssp             SGGGSCCGGGGGGSHHH
T ss_pred             CcccCCCHHHHhcCchh
Confidence            99999999999998543


No 132
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00  E-value=5.3e-41  Score=379.02  Aligned_cols=265  Identities=22%  Similarity=0.292  Sum_probs=212.3

Q ss_pred             CCCCCceeeeeecccCceEEEEEEE--CCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeEEec
Q 003185          502 GSFPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKIS  579 (840)
Q Consensus       502 ~~~~~y~i~~~LG~G~fG~Vy~a~~--~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~l~g~~~~  579 (840)
                      ...++|++.+.||+|+||.||+|++  .+..+|+|+......     ........+.+|+.+++.++|||||++++++.+
T Consensus        66 ~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~-----~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~  140 (410)
T 3v8s_A           66 MKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEM-----IKRSDSAFFWEERDIMAFANSPWVVQLFYAFQD  140 (410)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHH-----HHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred             cCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhh-----hhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEE
Confidence            3567899999999999999999998  467899999753210     011111235889999999999999999999986


Q ss_pred             CCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCCCcEE
Q 003185          580 SKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENIL  659 (840)
Q Consensus       580 ~~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKPeNIL  659 (840)
                      ...              .||||||++||+|.+++..      ..+++..++.++.||+.||.|||++||+||||||+|||
T Consensus       141 ~~~--------------~~lV~E~~~gg~L~~~l~~------~~~~e~~~~~~~~qi~~aL~~LH~~givHrDLKp~NIL  200 (410)
T 3v8s_A          141 DRY--------------LYMVMEYMPGGDLVNLMSN------YDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNML  200 (410)
T ss_dssp             SSE--------------EEEEECCCTTEEHHHHHHH------CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEE
T ss_pred             CCE--------------EEEEEeCCCCCcHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHee
Confidence            653              5999999999999999976      45899999999999999999999999999999999999


Q ss_pred             EecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHHHHHH
Q 003185          660 IDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLL  739 (840)
Q Consensus       660 Ld~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLGvIL~  739 (840)
                      |+.+       +.+||+|||+++........         .....+||+.|+|||++.+......++.++|||||||+||
T Consensus       201 l~~~-------g~ikL~DFG~a~~~~~~~~~---------~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvily  264 (410)
T 3v8s_A          201 LDKS-------GHLKLADFGTCMKMNKEGMV---------RCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLY  264 (410)
T ss_dssp             ECTT-------SCEEECCCTTCEECCTTSEE---------ECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHH
T ss_pred             ECCC-------CCEEEeccceeEeeccCCcc---------cccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHH
Confidence            9877       46999999999876442211         1234579999999999986322223789999999999999


Q ss_pred             HHHhCCCCCCCCCHHHHHHHHHcCC-CCCcchHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCC-
Q 003185          740 ELLTLQVPYMGLSELEIHDLIQMGK-RPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTE-  817 (840)
Q Consensus       740 ELLTG~~PF~~~~~~el~~~I~~~~-~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L~dLI~rCL~~DP~e-  817 (840)
                      ||++|+.||.+.+..+....|.... ...++.                         ....+..+.+||.+||..+|.+ 
T Consensus       265 ell~G~~Pf~~~~~~~~~~~i~~~~~~~~~p~-------------------------~~~~s~~~~~li~~lL~~~~~rl  319 (410)
T 3v8s_A          265 EMLVGDTPFYADSLVGTYSKIMNHKNSLTFPD-------------------------DNDISKEAKNLICAFLTDREVRL  319 (410)
T ss_dssp             HHHHSSCTTCCSSHHHHHHHHHTHHHHCCCCT-------------------------TCCCCHHHHHHHHHHSSCGGGCT
T ss_pred             HHHhCCCCCCCCChhhHHHHHHhccccccCCC-------------------------cccccHHHHHHHHHHccChhhhC
Confidence            9999999999999888888776531 111110                         0123567999999999999988 


Q ss_pred             -CCCHHHHHHHHHhhc
Q 003185          818 -RPTAGDLYEMFVART  832 (840)
Q Consensus       818 -RPSa~ELLehLe~l~  832 (840)
                       ||+++||++|.+-..
T Consensus       320 gR~~~~ei~~Hp~f~~  335 (410)
T 3v8s_A          320 GRNGVEEIKRHLFFKN  335 (410)
T ss_dssp             TSSCHHHHHTSGGGCC
T ss_pred             CCCCHHHHhcCccccC
Confidence             999999999966543


No 133
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00  E-value=1.8e-40  Score=365.78  Aligned_cols=285  Identities=14%  Similarity=0.129  Sum_probs=207.4

Q ss_pred             CCCCceeeeeecccCceEEEEEEEC-------CeeEEEEEEecccCCCChHHHHHh----HHhHHHHHHHHHhCCCCCcc
Q 003185          503 SFPSLSSCDEAGKSVSSSLFRCKFG-------SADAAAKVRTLKVCGSSADEIRNF----EYSCLGEVRMLGALRHSCIV  571 (840)
Q Consensus       503 ~~~~y~i~~~LG~G~fG~Vy~a~~~-------~~~vAVKI~~lk~~~~~~~~~~~f----~~~~~rEi~iL~~L~HpNIV  571 (840)
                      .-++|++.+.||+|+||.||+|.+.       +..||+|+....... ...+.+.+    ...+.+|+..+..++||||+
T Consensus        33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~-~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv  111 (364)
T 3op5_A           33 AAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGP-LFTELKFYQRAAKPEQIQKWIRTRKLKYLGVP  111 (364)
T ss_dssp             TCCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHH-HHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSC
T ss_pred             CCCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchh-HHHHHHHHHhhhhhHHHHHHHHHhhccCCCCC
Confidence            4458999999999999999999873       368999997543210 00111111    12345677788899999999


Q ss_pred             eeeeEEecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecc
Q 003185          572 EMYGHKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHR  651 (840)
Q Consensus       572 ~l~g~~~~~~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHR  651 (840)
                      ++++++.....          .....||||||+ |++|.+++..    ....+++..++.|+.||+.||.|||++||+||
T Consensus       112 ~~~~~~~~~~~----------~~~~~~lv~e~~-g~~L~~~~~~----~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHr  176 (364)
T 3op5_A          112 KYWGSGLHDKN----------GKSYRFMIMDRF-GSDLQKIYEA----NAKRFSRKTVLQLSLRILDILEYIHEHEYVHG  176 (364)
T ss_dssp             CEEEEEEEEET----------TEEEEEEEEECE-EEEHHHHHHH----TTSCCCHHHHHHHHHHHHHHHHHHHHTTEECC
T ss_pred             eEEeeeeeccC----------CcceEEEEEeCC-CCCHHHHHHh----ccCCCCHHHHHHHHHHHHHHHHHHHHCCeEEe
Confidence            99999875421          123569999999 8999999986    23579999999999999999999999999999


Q ss_pred             cCCCCcEEEecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhH
Q 003185          652 DIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDI  731 (840)
Q Consensus       652 DLKPeNILLd~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDV  731 (840)
                      ||||+||||+.+.     .+.+||+|||+++.+........   ..........||+.|+|||++.+    ..++.++||
T Consensus       177 Dlkp~Nill~~~~-----~~~~kl~DFG~a~~~~~~~~~~~---~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~~Di  244 (364)
T 3op5_A          177 DIKASNLLLNYKN-----PDQVYLVDYGLAYRYCPEGVHKA---YAADPKRCHDGTIEFTSIDAHNG----VAPSRRGDL  244 (364)
T ss_dssp             CCCGGGEEEESSC-----TTCEEECCCTTCEESSGGGCCCC---SSCCSSCCCCCCTTTCCHHHHTT----CCCCHHHHH
T ss_pred             cCCHHHEEEecCC-----CCeEEEEECCcceecccCCcccc---cccCcccccCCCCCccCHHHhCC----CCCCchhhH
Confidence            9999999998431     25799999999987654322111   01111234569999999999986    568999999


Q ss_pred             HHHHHHHHHHHhCCCCCCCCC-HHHHHHHHHcCCCCCcchHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHh
Q 003185          732 WSYGCLLLELLTLQVPYMGLS-ELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRC  810 (840)
Q Consensus       732 WSLGvIL~ELLTG~~PF~~~~-~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L~dLI~rC  810 (840)
                      |||||+||||+||+.||.+.. .............+.+...+...+.                  ....+..+.+||..|
T Consensus       245 ~slG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~li~~c  306 (364)
T 3op5_A          245 EILGYCMIQWLTGHLPWEDNLKDPKYVRDSKIRYRENIASLMDKCFP------------------AANAPGEIAKYMETV  306 (364)
T ss_dssp             HHHHHHHHHHHHSCCTTGGGTTCHHHHHHHHHHHHHCHHHHHHHHSC------------------TTCCCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhCCCCccccccCHHHHHHHHHHhhhhHHHHHHHhcc------------------cccCHHHHHHHHHHH
Confidence            999999999999999998542 2222222222222222222211110                  012356899999999


Q ss_pred             cccCCCCCCCHHHHHHHHHhhcC
Q 003185          811 TEENPTERPTAGDLYEMFVARTS  833 (840)
Q Consensus       811 L~~DP~eRPSa~ELLehLe~l~~  833 (840)
                      |..||.+||++.+|++.|+.+..
T Consensus       307 l~~~p~~RP~~~~l~~~l~~~~~  329 (364)
T 3op5_A          307 KLLDYTEKPLYENLRDILLQGLK  329 (364)
T ss_dssp             HTCCTTCCCCHHHHHHHHHHHHH
T ss_pred             hcCCCCCCCCHHHHHHHHHHHHH
Confidence            99999999999999999988764


No 134
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00  E-value=2.1e-40  Score=358.78  Aligned_cols=269  Identities=21%  Similarity=0.330  Sum_probs=213.0

Q ss_pred             CCCCCCceeeeeecccCceEEEEEEE-------CCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCccee
Q 003185          501 PGSFPSLSSCDEAGKSVSSSLFRCKF-------GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEM  573 (840)
Q Consensus       501 p~~~~~y~i~~~LG~G~fG~Vy~a~~-------~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~l  573 (840)
                      ....++|++.+.||+|+||.||+|.+       .+..||+|++...   .......    .+.+|+.++++++||||+++
T Consensus        26 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~----~~~~E~~~l~~l~h~~iv~~   98 (327)
T 2yfx_A           26 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEV---CSEQDEL----DFLMEALIISKFNHQNIVRC   98 (327)
T ss_dssp             BCCGGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSS---CCHHHHH----HHHHHHHHHHHCCCTTBCCE
T ss_pred             cCChhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccc---cchhhHH----HHHHHHHHHhhCCCCCCCeE
Confidence            35678999999999999999999984       3457999985321   2233333    34899999999999999999


Q ss_pred             eeEEecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhcc--CCCCCCHHHHHHHHHHHHHHHHHHHhCCeecc
Q 003185          574 YGHKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSET--GEKHVSVKLALFIAQDVAAALVELHSKHIMHR  651 (840)
Q Consensus       574 ~g~~~~~~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~--~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHR  651 (840)
                      ++++......              ||||||+++++|.+++......  ....+++..++.++.||+.||.|||++||+||
T Consensus        99 ~~~~~~~~~~--------------~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~i~H~  164 (327)
T 2yfx_A           99 IGVSLQSLPR--------------FILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHR  164 (327)
T ss_dssp             EEEECSSSSC--------------EEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHTTCCCS
T ss_pred             EEEEcCCCCc--------------EEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeecC
Confidence            9999866543              9999999999999999873211  11458899999999999999999999999999


Q ss_pred             cCCCCcEEEecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhH
Q 003185          652 DIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDI  731 (840)
Q Consensus       652 DLKPeNILLd~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDV  731 (840)
                      ||||+|||++.++.    ...+||+|||++.........        .......||+.|+|||++.+    ..++.++||
T Consensus       165 dlkp~NIli~~~~~----~~~~kl~Dfg~~~~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~----~~~~~~~Di  228 (327)
T 2yfx_A          165 DIAARNCLLTCPGP----GRVAKIGDFGMARDIYRASYY--------RKGGCAMLPVKWMPPEAFME----GIFTSKTDT  228 (327)
T ss_dssp             CCCGGGEEESCSST----TCCEEECCCHHHHHHHC--------------CCGGGSCGGGCCHHHHHH----CCCCHHHHH
T ss_pred             cCCHhHEEEecCCC----cceEEECcccccccccccccc--------ccCCCcCCCcceeCHhHhcC----CCCCchhhH
Confidence            99999999986531    256999999999765432211        01223468999999999986    668999999


Q ss_pred             HHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHcCCCCCcchHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHh
Q 003185          732 WSYGCLLLELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRC  810 (840)
Q Consensus       732 WSLGvIL~ELLT-G~~PF~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L~dLI~rC  810 (840)
                      |||||++|+|+| |..||......++...+..+..+..+.                           ..+..+.+||.+|
T Consensus       229 ~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~l~~li~~~  281 (327)
T 2yfx_A          229 WSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPK---------------------------NCPGPVYRIMTQC  281 (327)
T ss_dssp             HHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTCCCCCCT---------------------------TCCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHcCCCCCCCCcCHHHHHHHHhcCCCCCCCC---------------------------CCCHHHHHHHHHH
Confidence            999999999998 999999888888887777665433321                           1245789999999


Q ss_pred             cccCCCCCCCHHHHHHHHHhhcC
Q 003185          811 TEENPTERPTAGDLYEMFVARTS  833 (840)
Q Consensus       811 L~~DP~eRPSa~ELLehLe~l~~  833 (840)
                      |..||.+||++.+|+++|+.+..
T Consensus       282 l~~dp~~Rps~~~ll~~l~~~~~  304 (327)
T 2yfx_A          282 WQHQPEDRPNFAIILERIEYCTQ  304 (327)
T ss_dssp             TCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             hcCChhhCcCHHHHHHHHHHHhc
Confidence            99999999999999999998764


No 135
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00  E-value=1.1e-40  Score=366.93  Aligned_cols=256  Identities=24%  Similarity=0.280  Sum_probs=193.1

Q ss_pred             CCCceeeeeecccCceEEEEEEEC--CeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeEEecCC
Q 003185          504 FPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK  581 (840)
Q Consensus       504 ~~~y~i~~~LG~G~fG~Vy~a~~~--~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~l~g~~~~~~  581 (840)
                      -++|++.+.||+|+||.||+|.+.  +..||+|++....      ..+    .+.+|+.+|++++||||+++++++....
T Consensus        52 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~------~~~----~~~~E~~~l~~l~h~niv~~~~~~~~~~  121 (349)
T 2w4o_A           52 SDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV------DKK----IVRTEIGVLLRLSHPNIIKLKEIFETPT  121 (349)
T ss_dssp             GGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC--------------------CHHHHHCCCTTBCCEEEEEECSS
T ss_pred             cCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch------hHH----HHHHHHHHHHhCCCCCCcceeeeEecCC
Confidence            357999999999999999999984  5679999875321      122    3378999999999999999999998654


Q ss_pred             CCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCCCcEEEe
Q 003185          582 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID  661 (840)
Q Consensus       582 ~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKPeNILLd  661 (840)
                                    ..+|||||+++++|.+++..     ...+++..++.++.||+.||.|||++||+||||||+|||++
T Consensus       122 --------------~~~lv~e~~~~~~L~~~l~~-----~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIll~  182 (349)
T 2w4o_A          122 --------------EISLVLELVTGGELFDRIVE-----KGYYSERDAADAVKQILEAVAYLHENGIVHRDLKPENLLYA  182 (349)
T ss_dssp             --------------EEEEEECCCCSCBHHHHHTT-----CSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEES
T ss_pred             --------------eEEEEEEeCCCCCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCcccEEEe
Confidence                          35999999999999999864     35689999999999999999999999999999999999997


Q ss_pred             cccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHHHHHHHH
Q 003185          662 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL  741 (840)
Q Consensus       662 ~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLGvIL~EL  741 (840)
                      ...    ..+.+||+|||+++.......           .....||+.|+|||++.+    ..++.++|||||||+||||
T Consensus       183 ~~~----~~~~~kl~Dfg~a~~~~~~~~-----------~~~~~gt~~y~aPE~~~~----~~~~~~~DiwslG~il~el  243 (349)
T 2w4o_A          183 TPA----PDAPLKIADFGLSKIVEHQVL-----------MKTVCGTPGYCAPEILRG----CAYGPEVDMWSVGIITYIL  243 (349)
T ss_dssp             SSS----TTCCEEECCCC---------------------------CGGGSCHHHHTT----CCCCTHHHHHHHHHHHHHH
T ss_pred             cCC----CCCCEEEccCccccccCcccc-----------cccccCCCCccCHHHhcC----CCCCcccchHHHHHHHHHH
Confidence            521    136799999999986543211           123469999999999986    5689999999999999999


Q ss_pred             HhCCCCCCCCCHHH-HHHHHHcCCCCCcchHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCC
Q 003185          742 LTLQVPYMGLSELE-IHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPT  820 (840)
Q Consensus       742 LTG~~PF~~~~~~e-l~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L~dLI~rCL~~DP~eRPS  820 (840)
                      ++|..||......+ +...+..........                        .....+..+.+||.+||..||.+|||
T Consensus       244 l~g~~pf~~~~~~~~~~~~i~~~~~~~~~~------------------------~~~~~~~~~~~li~~~L~~dP~~Rpt  299 (349)
T 2w4o_A          244 LCGFEPFYDERGDQFMFRRILNCEYYFISP------------------------WWDEVSLNAKDLVRKLIVLDPKKRLT  299 (349)
T ss_dssp             HHSSCTTCCTTCHHHHHHHHHTTCCCCCTT------------------------TTTTSCHHHHHHHHTTSCSSGGGSCC
T ss_pred             HhCCCCCCCCcccHHHHHHHHhCCCccCCc------------------------hhhhCCHHHHHHHHHHccCChhhCcC
Confidence            99999997765443 555555543221111                        01123567999999999999999999


Q ss_pred             HHHHHHHHHhh
Q 003185          821 AGDLYEMFVAR  831 (840)
Q Consensus       821 a~ELLehLe~l  831 (840)
                      +.++++|.+-.
T Consensus       300 ~~e~l~hp~~~  310 (349)
T 2w4o_A          300 TFQALQHPWVT  310 (349)
T ss_dssp             HHHHHHSTTTT
T ss_pred             HHHHhcCcccC
Confidence            99999986543


No 136
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00  E-value=6.6e-40  Score=348.54  Aligned_cols=268  Identities=25%  Similarity=0.357  Sum_probs=216.1

Q ss_pred             CCCCCceeeeeecccCceEEEEEEE--CCeeEEEEEEecccCC-CChHHHHHhHHhHHHHHHHHHhCC-CCCcceeeeEE
Q 003185          502 GSFPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCG-SSADEIRNFEYSCLGEVRMLGALR-HSCIVEMYGHK  577 (840)
Q Consensus       502 ~~~~~y~i~~~LG~G~fG~Vy~a~~--~~~~vAVKI~~lk~~~-~~~~~~~~f~~~~~rEi~iL~~L~-HpNIV~l~g~~  577 (840)
                      ..+++|++.+.||+|+||.||+|.+  .+..||+|++...... ......+...+.+.+|+.+++++. ||||+++++++
T Consensus        14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~   93 (298)
T 1phk_A           14 GFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTY   93 (298)
T ss_dssp             -CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEE
T ss_pred             chhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeee
Confidence            4678999999999999999999998  5688999997654322 223344455567799999999996 99999999999


Q ss_pred             ecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCCCc
Q 003185          578 ISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSEN  657 (840)
Q Consensus       578 ~~~~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKPeN  657 (840)
                      ....              ..++||||+++++|.+++..     ...+++..++.++.||+.||.|||++||+||||||+|
T Consensus        94 ~~~~--------------~~~lv~e~~~~~~L~~~l~~-----~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~N  154 (298)
T 1phk_A           94 ETNT--------------FFFLVFDLMKKGELFDYLTE-----KVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPEN  154 (298)
T ss_dssp             ECSS--------------EEEEEEECCTTCBHHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGG
T ss_pred             ccCC--------------eEEEEEeccCCCcHHHHHhc-----cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcce
Confidence            7654              35999999999999999986     2568999999999999999999999999999999999


Q ss_pred             EEEecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhccc--CCCCCCchhhHHHHH
Q 003185          658 ILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMH--KPNLYGLEVDIWSYG  735 (840)
Q Consensus       658 ILLd~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~--~~~~~s~kSDVWSLG  735 (840)
                      ||++.+       +.+||+|||++........           .....||+.|+|||++.+..  ....++.++||||||
T Consensus       155 il~~~~-------~~~kl~dfg~~~~~~~~~~-----------~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG  216 (298)
T 1phk_A          155 ILLDDD-------MNIKLTDFGFSCQLDPGEK-----------LREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTG  216 (298)
T ss_dssp             EEECTT-------CCEEECCCTTCEECCTTCC-----------BCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHH
T ss_pred             EEEcCC-------CcEEEecccchhhcCCCcc-----------cccccCCccccCHHHhccccccccccCCcccccHhHH
Confidence            999877       4599999999976543211           12346899999999986321  124578899999999


Q ss_pred             HHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCcchHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCC
Q 003185          736 CLLLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENP  815 (840)
Q Consensus       736 vIL~ELLTG~~PF~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L~dLI~rCL~~DP  815 (840)
                      +++|+|++|..||...+.......+..........                        .....+..+.+||.+||..||
T Consensus       217 ~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~~l~~li~~~l~~dp  272 (298)
T 1phk_A          217 VIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSP------------------------EWDDYSDTVKDLVSRFLVVQP  272 (298)
T ss_dssp             HHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTT------------------------TGGGSCHHHHHHHHHHCCSSG
T ss_pred             HHHHHHHHCCCCCcCccHHHHHHHHhcCCcccCcc------------------------cccccCHHHHHHHHHHccCCc
Confidence            99999999999999888877777776653221110                        112335679999999999999


Q ss_pred             CCCCCHHHHHHHHHh
Q 003185          816 TERPTAGDLYEMFVA  830 (840)
Q Consensus       816 ~eRPSa~ELLehLe~  830 (840)
                      .+|||+.++++|..-
T Consensus       273 ~~Rps~~~ll~h~~~  287 (298)
T 1phk_A          273 QKRYTAEEALAHPFF  287 (298)
T ss_dssp             GGSCCHHHHTTSGGG
T ss_pred             ccCCCHHHHHhChHh
Confidence            999999999998543


No 137
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00  E-value=3.2e-40  Score=363.52  Aligned_cols=258  Identities=27%  Similarity=0.395  Sum_probs=208.9

Q ss_pred             CCceeeeeecccCceEEEEEEE--CCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeEEecCCC
Q 003185          505 PSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW  582 (840)
Q Consensus       505 ~~y~i~~~LG~G~fG~Vy~a~~--~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~l~g~~~~~~~  582 (840)
                      ..|.+.+.||+|+||.||+|.+  .+..||+|++..... ......    +.+.+|+.+|++++||||+++++++.... 
T Consensus        54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~-~~~~~~----~~~~~E~~~l~~l~hpniv~~~~~~~~~~-  127 (348)
T 1u5q_A           54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGK-QSNEKW----QDIIKEVRFLQKLRHPNTIQYRGCYLREH-  127 (348)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSS-CHHHHH----HHHHHHHHHHHHCCCTTBCCEEEEEEETT-
T ss_pred             hheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccc-cchHHH----HHHHHHHHHHHhCCCCCEeeEEEEEEECC-
Confidence            4589999999999999999996  678899998754321 112222    34589999999999999999999998655 


Q ss_pred             CCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCCCcEEEec
Q 003185          583 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL  662 (840)
Q Consensus       583 ~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKPeNILLd~  662 (840)
                                   ..+|||||+. |+|.+++...    ...+++..++.++.||+.||.|||++||+||||||+|||++.
T Consensus       128 -------------~~~lv~e~~~-g~l~~~l~~~----~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~  189 (348)
T 1u5q_A          128 -------------TAWLVMEYCL-GSASDLLEVH----KKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSE  189 (348)
T ss_dssp             -------------EEEEEEECCS-EEHHHHHHHH----TSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEET
T ss_pred             -------------eEEEEEecCC-CCHHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECC
Confidence                         3599999997 6898888641    356899999999999999999999999999999999999997


Q ss_pred             ccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHHHHHHHHH
Q 003185          663 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL  742 (840)
Q Consensus       663 ~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLGvIL~ELL  742 (840)
                      +       +.+||+|||++......              ....||+.|+|||++.+.. ...++.++|||||||+||||+
T Consensus       190 ~-------~~~kL~DfG~a~~~~~~--------------~~~~gt~~y~aPE~~~~~~-~~~~~~~~DiwslG~il~ell  247 (348)
T 1u5q_A          190 P-------GLVKLGDFGSASIMAPA--------------NSFVGTPYWMAPEVILAMD-EGQYDGKVDVWSLGITCIELA  247 (348)
T ss_dssp             T-------TEEEECCCTTCBSSSSB--------------CCCCSCGGGCCHHHHHTTS-SCCBCTHHHHHHHHHHHHHHH
T ss_pred             C-------CCEEEeeccCceecCCC--------------CcccCCcceeCHhhhcccc-CCCCCcHHHHHHHHHHHHHHH
Confidence            7       56999999999765321              2246999999999996422 256789999999999999999


Q ss_pred             hCCCCCCCCCHHHHHHHHHcCCCCCcchHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHH
Q 003185          743 TLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAG  822 (840)
Q Consensus       743 TG~~PF~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L~dLI~rCL~~DP~eRPSa~  822 (840)
                      +|..||.+.+.......+.....+.+..                          ...++.+.+||.+||+.||.+|||++
T Consensus       248 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~l~~li~~~l~~dP~~Rps~~  301 (348)
T 1u5q_A          248 ERKPPLFNMNAMSALYHIAQNESPALQS--------------------------GHWSEYFRNFVDSCLQKIPQDRPTSE  301 (348)
T ss_dssp             HSSCTTTTSCHHHHHHHHHHSCCCCCCC--------------------------TTSCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred             hCCCCCCCCChHHHHHHHHhcCCCCCCC--------------------------CCCCHHHHHHHHHHcccChhhCcCHH
Confidence            9999999888777666666554332211                          11245789999999999999999999


Q ss_pred             HHHHHHHhhcCC
Q 003185          823 DLYEMFVARTSS  834 (840)
Q Consensus       823 ELLehLe~l~~~  834 (840)
                      +|++|.+-....
T Consensus       302 ~ll~h~~~~~~~  313 (348)
T 1u5q_A          302 VLLKHRFVLRER  313 (348)
T ss_dssp             HHTTCHHHHSCC
T ss_pred             HHhhChhhhccC
Confidence            999998765543


No 138
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00  E-value=2.7e-40  Score=361.41  Aligned_cols=301  Identities=17%  Similarity=0.216  Sum_probs=214.7

Q ss_pred             CCCCCceeeeeecccCceEEEEEEE--CCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeEEec
Q 003185          502 GSFPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKIS  579 (840)
Q Consensus       502 ~~~~~y~i~~~LG~G~fG~Vy~a~~--~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~l~g~~~~  579 (840)
                      ..+++|++.+.||+|+||.||+|.+  .+..||+|++......  ..    ....+.+|+.+++.++||||+++++++..
T Consensus        14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~--~~----~~~~~~~E~~~l~~l~h~~iv~~~~~~~~   87 (351)
T 3mi9_A           14 DEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEK--EG----FPITALREIKILQLLKHENVVNLIEICRT   87 (351)
T ss_dssp             CBGGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCS--SS----SCHHHHHHHHHHHHCCCTTBCCEEEEEEE
T ss_pred             ccccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEeccccc--cc----chHHHHHHHHHHHhccCCCcccHhheeec
Confidence            4678999999999999999999998  5778999986443221  11    12234889999999999999999999986


Q ss_pred             CCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCCCcEE
Q 003185          580 SKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENIL  659 (840)
Q Consensus       580 ~~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKPeNIL  659 (840)
                      ....      ........+|||||+.+ +|...+..    ....+++..++.++.||+.||.|||++||+||||||+|||
T Consensus        88 ~~~~------~~~~~~~~~lv~e~~~~-~l~~~l~~----~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl  156 (351)
T 3mi9_A           88 KASP------YNRCKGSIYLVFDFCEH-DLAGLLSN----VLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVL  156 (351)
T ss_dssp             C--------------CEEEEEEECCSE-EHHHHHHC----TTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEE
T ss_pred             cccc------cccCCceEEEEEeccCC-CHHHHHhh----ccCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEE
Confidence            5321      00112357999999985 88888764    2356999999999999999999999999999999999999


Q ss_pred             EecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHHHHHH
Q 003185          660 IDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLL  739 (840)
Q Consensus       660 Ld~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLGvIL~  739 (840)
                      ++.+       +.+||+|||+++.+......      .........||+.|+|||++.+   ...++.++|||||||++|
T Consensus       157 ~~~~-------~~~kl~Dfg~a~~~~~~~~~------~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~~DiwslG~il~  220 (351)
T 3mi9_A          157 ITRD-------GVLKLADFGLARAFSLAKNS------QPNRYTNRVVTLWYRPPELLLG---ERDYGPPIDLWGAGCIMA  220 (351)
T ss_dssp             ECTT-------SCEEECCCTTCEECCCCSSS------SCCCCCSSCSCGGGCCHHHHTT---CCSCCTHHHHHHHHHHHH
T ss_pred             EcCC-------CCEEEccchhcccccccccc------cccccCCcccccCccCchhhcC---CCCCCcHhHHHHHHHHHH
Confidence            9877       46999999999876532211      1111234568999999999975   245789999999999999


Q ss_pred             HHHhCCCCCCCCCHHHHHHHHHcCCCCCcchHHhhhccCccccccccCCCCCCchh-----hhhhHHHHHHHHHHhcccC
Q 003185          740 ELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEA-----ELETLSFLVDVFRRCTEEN  814 (840)
Q Consensus       740 ELLTG~~PF~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~-----~~~~s~~L~dLI~rCL~~D  814 (840)
                      +|++|..||.+.+.......+........+..+................. .....     ....++.+.+||.+||+.|
T Consensus       221 ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~li~~~L~~d  299 (351)
T 3mi9_A          221 EMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKG-QKRKVKDRLKAYVRDPYALDLIDKLLVLD  299 (351)
T ss_dssp             HHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCGGGTSSCCCSS-CCCCHHHHHHHHHCCHHHHHHHHHHSCSS
T ss_pred             HHHhCCCCCCCCChHHHHHHHHHHhCCCChhhccccccchhhcccccccc-cccCHHHHhhhccCChHHHHHHHHHhcCC
Confidence            99999999999888777766655322111111111100000000000000 00000     0112456899999999999


Q ss_pred             CCCCCCHHHHHHHHHhhcCCCC
Q 003185          815 PTERPTAGDLYEMFVARTSSSI  836 (840)
Q Consensus       815 P~eRPSa~ELLehLe~l~~~~~  836 (840)
                      |.+|||++|+++|.+-.....+
T Consensus       300 P~~R~t~~e~l~hp~f~~~~~~  321 (351)
T 3mi9_A          300 PAQRIDSDDALNHDFFWSDPMP  321 (351)
T ss_dssp             GGGSCCHHHHHTSGGGGSSSCC
T ss_pred             hhhCCCHHHHhCCCCcCCCCCc
Confidence            9999999999999776544433


No 139
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00  E-value=4.1e-40  Score=350.39  Aligned_cols=261  Identities=21%  Similarity=0.287  Sum_probs=212.4

Q ss_pred             CCCCCCCceeeeeecccCceEEEEEEEC--CeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeEE
Q 003185          500 DPGSFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHK  577 (840)
Q Consensus       500 ~p~~~~~y~i~~~LG~G~fG~Vy~a~~~--~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~l~g~~  577 (840)
                      ++...++|.+.+.||+|+||.||+|.+.  +..+|+|++..... ......+    .+.+|+.+++.++||||+++++++
T Consensus        10 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~-~~~~~~~----~~~~e~~~l~~l~h~~iv~~~~~~   84 (294)
T 2rku_A           10 DPRSRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLL-LKPHQRE----KMSMEISIHRSLAHQHVVGFHGFF   84 (294)
T ss_dssp             ETTTTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGC-CSHHHHH----HHHHHHHHHHTCCCTTBCCEEEEE
T ss_pred             CCCcccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhc-cCHHHHH----HHHHHHHHHHhCCCCCEeeeeeee
Confidence            3456788999999999999999999984  67899998754432 2222333    448999999999999999999999


Q ss_pred             ecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCCCc
Q 003185          578 ISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSEN  657 (840)
Q Consensus       578 ~~~~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKPeN  657 (840)
                      ....              ..++||||+++++|.+++..     ...+++..++.++.||+.||.|||++||+||||||+|
T Consensus        85 ~~~~--------------~~~lv~e~~~~~~L~~~~~~-----~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~N  145 (294)
T 2rku_A           85 EDND--------------FVFVVLELCRRRSLLELHKR-----RKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGN  145 (294)
T ss_dssp             ECSS--------------EEEEEEECCTTCBHHHHHHH-----HCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGG
T ss_pred             ccCC--------------EEEEEEecCCCCCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHh
Confidence            8655              35999999999999999876     2468999999999999999999999999999999999


Q ss_pred             EEEecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHHHH
Q 003185          658 ILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCL  737 (840)
Q Consensus       658 ILLd~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLGvI  737 (840)
                      ||++.+       +.+||+|||++.........          .....||+.|+|||++.+    ..++.++||||||++
T Consensus       146 il~~~~-------~~~kl~dfg~~~~~~~~~~~----------~~~~~~~~~y~aPE~~~~----~~~~~~~Di~slG~~  204 (294)
T 2rku_A          146 LFLNED-------LEVKIGDFGLATKVEYDGER----------KKVLCGTPNYIAPEVLSK----KGHSFEVDVWSIGCI  204 (294)
T ss_dssp             EEECTT-------CCEEECCCTTCEECCSTTCC----------BCCCCSCCSSCCHHHHTT----SCBCTHHHHHHHHHH
T ss_pred             EEEcCC-------CCEEEEeccCceecccCccc----------cccccCCCCcCCcchhcc----CCCCchhhHHHHHHH
Confidence            999877       45999999999865432111          123468999999999976    567899999999999


Q ss_pred             HHHHHhCCCCCCCCCHHHHHHHHHcCCCCCcchHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCC
Q 003185          738 LLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTE  817 (840)
Q Consensus       738 L~ELLTG~~PF~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L~dLI~rCL~~DP~e  817 (840)
                      +|+|++|+.||......+....+..... .++.                           ..+..+.+||.+||+.||.+
T Consensus       205 l~~l~~g~~p~~~~~~~~~~~~~~~~~~-~~~~---------------------------~~~~~~~~li~~~l~~~p~~  256 (294)
T 2rku_A          205 MYTLLVGKPPFETSCLKETYLRIKKNEY-SIPK---------------------------HINPVAASLIQKMLQTDPTA  256 (294)
T ss_dssp             HHHHHHSSCTTCCSSHHHHHHHHHTTCC-CCCT---------------------------TSCHHHHHHHHHHTCSSGGG
T ss_pred             HHHHHhCCCCCCCCCHHHHHHHHhhccC-CCcc---------------------------ccCHHHHHHHHHHcccChhh
Confidence            9999999999998887776666654422 1111                           12457899999999999999


Q ss_pred             CCCHHHHHHHHHhhcC
Q 003185          818 RPTAGDLYEMFVARTS  833 (840)
Q Consensus       818 RPSa~ELLehLe~l~~  833 (840)
                      |||+.++++|..-...
T Consensus       257 Rps~~~ll~~~~~~~~  272 (294)
T 2rku_A          257 RPTINELLNDEFFTSG  272 (294)
T ss_dssp             SCCGGGGGGSHHHHTS
T ss_pred             CcCHHHHhhChheecC
Confidence            9999999998665443


No 140
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00  E-value=2.3e-40  Score=370.74  Aligned_cols=257  Identities=23%  Similarity=0.301  Sum_probs=205.3

Q ss_pred             CCCCCceeeeeecccCceEEEEEEE--CCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeEEec
Q 003185          502 GSFPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKIS  579 (840)
Q Consensus       502 ~~~~~y~i~~~LG~G~fG~Vy~a~~--~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~l~g~~~~  579 (840)
                      ..+++|++.+.||+|+||.||+|.+  .+..+|+|++.....     ........+.+|+.+|+.++|||||++++++..
T Consensus        12 v~~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~-----~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~   86 (384)
T 4fr4_A           12 VNFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKC-----VERNEVRNVFKELQIMQGLEHPFLVNLWYSFQD   86 (384)
T ss_dssp             CCGGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHH-----HHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEEC
T ss_pred             CChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhc-----ccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEe
Confidence            6788999999999999999999997  467799998753321     111122345899999999999999999999986


Q ss_pred             CCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCCCcEE
Q 003185          580 SKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENIL  659 (840)
Q Consensus       580 ~~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKPeNIL  659 (840)
                      ...              .|+||||+.||+|..++..     ...+++..++.++.||+.||.|||++||+||||||+|||
T Consensus        87 ~~~--------------~~lv~e~~~gg~L~~~l~~-----~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIl  147 (384)
T 4fr4_A           87 EED--------------MFMVVDLLLGGDLRYHLQQ-----NVHFKEETVKLFICELVMALDYLQNQRIIHRDMKPDNIL  147 (384)
T ss_dssp             SSE--------------EEEEECCCTTEEHHHHHHT-----TCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEE
T ss_pred             CCE--------------EEEEEecCCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeE
Confidence            653              5999999999999999975     356999999999999999999999999999999999999


Q ss_pred             EecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHHHHHH
Q 003185          660 IDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLL  739 (840)
Q Consensus       660 Ld~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLGvIL~  739 (840)
                      |+.+       +.+||+|||+++.+.....           .....||+.|+|||++.... ...++.++|||||||+||
T Consensus       148 l~~~-------g~vkL~DFG~a~~~~~~~~-----------~~~~~gt~~Y~aPE~~~~~~-~~~~~~~~DiwSlG~il~  208 (384)
T 4fr4_A          148 LDEH-------GHVHITDFNIAAMLPRETQ-----------ITTMAGTKPYMAPEMFSSRK-GAGYSFAVDWWSLGVTAY  208 (384)
T ss_dssp             ECTT-------SCEEECCCTTCEECCTTCC-----------BCCCCSCGGGCCGGGTCCCS-SCCBCTTHHHHHHHHHHH
T ss_pred             ECCC-------CCEEEeccceeeeccCCCc-----------eeccCCCccccCCeeeccCC-CCCCCccceeechHHHHH
Confidence            9877       4699999999986543211           13457999999999997421 245789999999999999


Q ss_pred             HHHhCCCCCCCC---CHHHHHHHHHcCCCCCcchHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCC
Q 003185          740 ELLTLQVPYMGL---SELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPT  816 (840)
Q Consensus       740 ELLTG~~PF~~~---~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L~dLI~rCL~~DP~  816 (840)
                      ||++|+.||...   ....+...+..... .++.                           ..+..+.+||.+||..||.
T Consensus       209 elltG~~Pf~~~~~~~~~~~~~~~~~~~~-~~p~---------------------------~~s~~~~~li~~lL~~dP~  260 (384)
T 4fr4_A          209 ELLRGRRPYHIRSSTSSKEIVHTFETTVV-TYPS---------------------------AWSQEMVSLLKKLLEPNPD  260 (384)
T ss_dssp             HHHHSSCSSCCCTTSCHHHHHHHHHHCCC-CCCT---------------------------TSCHHHHHHHHHHSCSSGG
T ss_pred             HHHhCCCCCCCCCCccHHHHHHHHhhccc-CCCC---------------------------cCCHHHHHHHHHHhcCCHh
Confidence            999999999754   33344444433321 1111                           1245789999999999999


Q ss_pred             CCCC-HHHHHHHHH
Q 003185          817 ERPT-AGDLYEMFV  829 (840)
Q Consensus       817 eRPS-a~ELLehLe  829 (840)
                      +||+ +++|++|..
T Consensus       261 ~R~s~~~~l~~hp~  274 (384)
T 4fr4_A          261 QRFSQLSDVQNFPY  274 (384)
T ss_dssp             GSCCSHHHHHTSGG
T ss_pred             HhcccHHHHHcChh
Confidence            9998 888888643


No 141
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00  E-value=3.4e-40  Score=357.14  Aligned_cols=296  Identities=20%  Similarity=0.216  Sum_probs=201.9

Q ss_pred             CCCCCceeeeeecccCceEEEEEEECCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeEEecCC
Q 003185          502 GSFPSLSSCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK  581 (840)
Q Consensus       502 ~~~~~y~i~~~LG~G~fG~Vy~a~~~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~l~g~~~~~~  581 (840)
                      ..+++|++.+.||+|+||.||+|++.+..||+|++....       ...+  ....|+..+..++||||+++++.+....
T Consensus        10 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~-------~~~~--~~e~~~~~~~~~~h~~i~~~~~~~~~~~   80 (336)
T 3g2f_A           10 LDLDNLKLLELIGRGRYGAVYKGSLDERPVAVKVFSFAN-------RQNF--INEKNIYRVPLMEHDNIARFIVGDERVT   80 (336)
T ss_dssp             CCTTSEEEEEEEEECSSEEEEEEEETTEEEEEEEEEGGG-------HHHH--HHHHHHHTSTTCCCTTBCCEEEEEEEEC
T ss_pred             cChHHhheeeecccCCCeEEEEEEECCeEEEEEEeeccc-------hhhH--HHHHHHHHHHhccCcchhhheecccccc
Confidence            678999999999999999999999999999999975331       1122  1123444455689999999998765432


Q ss_pred             CCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhC---------Ceeccc
Q 003185          582 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSK---------HIMHRD  652 (840)
Q Consensus       582 ~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~---------gIVHRD  652 (840)
                      ..         .....+|||||+++|+|.+++..      ...++..++.++.||+.||.|||++         ||+|||
T Consensus        81 ~~---------~~~~~~lv~e~~~~g~L~~~l~~------~~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~D  145 (336)
T 3g2f_A           81 AD---------GRMEYLLVMEYYPNGSLXKYLSL------HTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRD  145 (336)
T ss_dssp             TT---------SCEEEEEEECCCTTCBHHHHHHH------CCBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSS
T ss_pred             cC---------CCceEEEEEecCCCCcHHHHHhh------cccchhHHHHHHHHHHHHHHHHHhhhccccccccceeecc
Confidence            11         22356899999999999999976      3468999999999999999999999         999999


Q ss_pred             CCCCcEEEecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCC---CCCCchh
Q 003185          653 IKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKP---NLYGLEV  729 (840)
Q Consensus       653 LKPeNILLd~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~---~~~s~kS  729 (840)
                      |||+||||+.+       +.+||+|||+++.+........  ...........||+.|+|||++.+....   ..++.++
T Consensus       146 ikp~Nill~~~-------~~~kL~DFG~a~~~~~~~~~~~--~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~  216 (336)
T 3g2f_A          146 LNSRNVLVKND-------GTCVISDFGLSMRLTGNRLVRP--GEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQV  216 (336)
T ss_dssp             CSGGGEEECTT-------SCEEECCCTTCEECSSSSCC-----------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHH
T ss_pred             cccceEEEcCC-------CcEEEeeccceeecccccccCc--cccccccccCCCccceeCchhhcCCccccccccccccc
Confidence            99999999876       4699999999987654321110  0011112334699999999999752110   2356789


Q ss_pred             hHHHHHHHHHHHHhCCCCCCCC-CHHH--HHHHHHcCCCCCcchHHhhhccCccccccccCCCCCCchhhhhhHHHHHHH
Q 003185          730 DIWSYGCLLLELLTLQVPYMGL-SELE--IHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDV  806 (840)
Q Consensus       730 DVWSLGvIL~ELLTG~~PF~~~-~~~e--l~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L~dL  806 (840)
                      |||||||+||||++|..||... ....  ..........+.... +...... .........   ........++.+.+|
T Consensus       217 DiwslG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~---~~~~~~~~~~~l~~l  291 (336)
T 3g2f_A          217 DMYALGLIYWEIFMRCTDLFPGESVPEYQMAFQTEVGNHPTFED-MQVLVSR-EKQRPKFPE---AWKENSLAVRSLKET  291 (336)
T ss_dssp             HHHHHHHHHHHHHTTBGGGSTTSCCCCCCCTTHHHHCSSCCHHH-HHHHHTT-SCCCCCCCT---TCCCCSHHHHHHHHH
T ss_pred             chHHHHHHHHHHHhcCCcCCCccchhHHHHhhhcccCCCchHHH-HHhhhcc-cccCCCCCc---ccccccchHHHHHHH
Confidence            9999999999999997776332 1110  000000011111110 0000000 000000000   001122356789999


Q ss_pred             HHHhcccCCCCCCCHHHHHHHHHhhcCCC
Q 003185          807 FRRCTEENPTERPTAGDLYEMFVARTSSS  835 (840)
Q Consensus       807 I~rCL~~DP~eRPSa~ELLehLe~l~~~~  835 (840)
                      |.+||..||.+|||+.||++.|+.+....
T Consensus       292 i~~cl~~dP~~Rps~~e~l~~L~~ll~~~  320 (336)
T 3g2f_A          292 IEDCWDQDAEARLTAQXAEERMAELMMIW  320 (336)
T ss_dssp             HHHHSCSSGGGSCCHHHHHHHHHHHHHCC
T ss_pred             HHHHhcCChhhCcchHHHHHHHHHHHHHH
Confidence            99999999999999999999999987654


No 142
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00  E-value=2.8e-40  Score=347.20  Aligned_cols=262  Identities=21%  Similarity=0.231  Sum_probs=202.9

Q ss_pred             CCCCCceeeeeecccCceEEEEEEE--CCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhC-CCCCcceeeeEEe
Q 003185          502 GSFPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEMYGHKI  578 (840)
Q Consensus       502 ~~~~~y~i~~~LG~G~fG~Vy~a~~--~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L-~HpNIV~l~g~~~  578 (840)
                      ...++|++.+.||+|+||.||+|.+  .+..+|+|+.....  .......    .+.+|+.++..+ +||||+++++++.
T Consensus         8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~----~~~~e~~~~~~l~~h~~iv~~~~~~~   81 (289)
T 1x8b_A            8 RYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPL--AGSVDEQ----NALREVYAHAVLGQHSHVVRYFSAWA   81 (289)
T ss_dssp             HHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCC--TTSHHHH----HHHHHHHHHHHSCSCTTBCCEEEEEE
T ss_pred             cccchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccc--cccHHHH----HHHHHHHHHHHhCCCCCeeeeeeeee
Confidence            3446899999999999999999998  58899999875432  2222223    348999999999 8999999999998


Q ss_pred             cCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCCCcE
Q 003185          579 SSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENI  658 (840)
Q Consensus       579 ~~~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKPeNI  658 (840)
                      ...              ..+|||||+++++|.+++...... ...+++..++.++.||+.||.|||++||+||||||+||
T Consensus        82 ~~~--------------~~~lv~e~~~~~~L~~~l~~~~~~-~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NI  146 (289)
T 1x8b_A           82 EDD--------------HMLIQNEYCNGGSLADAISENYRI-MSYFKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNI  146 (289)
T ss_dssp             ETT--------------EEEEEEECCTTCBHHHHHHHHHHH-TCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGE
T ss_pred             cCC--------------eEEEEEEecCCCcHHHHHHhhccc-ccCCCHHHHHHHHHHHHHHHHHHHhCCEeecCCCHHHE
Confidence            655              359999999999999999863322 25689999999999999999999999999999999999


Q ss_pred             EEeccccc------------CCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCC
Q 003185          659 LIDLERKK------------ADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYG  726 (840)
Q Consensus       659 LLd~~~~~------------~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s  726 (840)
                      |++.++..            ......+||+|||++......              ....||+.|+|||++.+   ...++
T Consensus       147 l~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~--------------~~~~gt~~y~aPE~~~~---~~~~~  209 (289)
T 1x8b_A          147 FISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSP--------------QVEEGDSRFLANEVLQE---NYTHL  209 (289)
T ss_dssp             EEC--------------------CCCEEECCCTTCEETTCS--------------CCCCCCGGGCCHHHHTT---CCTTH
T ss_pred             EEcCCCCCcccccccccccccCCceEEEEcccccccccCCc--------------cccCCCccccChhHhcC---CCCCC
Confidence            99865310            012357999999999765432              12358999999999975   23567


Q ss_pred             chhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCcchHHhhhccCccccccccCCCCCCchhhhhhHHHHHHH
Q 003185          727 LEVDIWSYGCLLLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDV  806 (840)
Q Consensus       727 ~kSDVWSLGvIL~ELLTG~~PF~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L~dL  806 (840)
                      .++|||||||++|+|++|.+|+....   ....+..+..+.++.                           ..+..+.+|
T Consensus       210 ~~~Di~slG~il~~l~~~~~~~~~~~---~~~~~~~~~~~~~~~---------------------------~~~~~~~~l  259 (289)
T 1x8b_A          210 PKADIFALALTVVCAAGAEPLPRNGD---QWHEIRQGRLPRIPQ---------------------------VLSQEFTEL  259 (289)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCCCSSSH---HHHHHHTTCCCCCSS---------------------------CCCHHHHHH
T ss_pred             chhhHHHHHHHHHHHhcCCCCCcchh---HHHHHHcCCCCCCCc---------------------------ccCHHHHHH
Confidence            89999999999999999998775442   233444444333331                           124578999


Q ss_pred             HHHhcccCCCCCCCHHHHHHHHHhh
Q 003185          807 FRRCTEENPTERPTAGDLYEMFVAR  831 (840)
Q Consensus       807 I~rCL~~DP~eRPSa~ELLehLe~l  831 (840)
                      |.+||..||.+|||+.++++|..-.
T Consensus       260 i~~~l~~dp~~Rps~~~ll~h~~~~  284 (289)
T 1x8b_A          260 LKVMIHPDPERRPSAMALVKHSVLL  284 (289)
T ss_dssp             HHHHTCSSGGGSCCHHHHHTCTTC-
T ss_pred             HHHHhCCCcccCCCHHHHhhChHhh
Confidence            9999999999999999999986543


No 143
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00  E-value=5e-40  Score=348.02  Aligned_cols=256  Identities=21%  Similarity=0.268  Sum_probs=209.9

Q ss_pred             CCCCCceeeeeecccCceEEEEEEE--CCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeEEec
Q 003185          502 GSFPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKIS  579 (840)
Q Consensus       502 ~~~~~y~i~~~LG~G~fG~Vy~a~~--~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~l~g~~~~  579 (840)
                      ..+++|++.+.||+|+||.||+|.+  .+..+|+|+.....     .........+.+|+.++++++||||+++++++..
T Consensus        11 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-----~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~   85 (284)
T 2vgo_A           11 FTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQ-----LEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHD   85 (284)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHH-----HHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEEC
T ss_pred             hhhhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccc-----cchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEc
Confidence            5678999999999999999999998  46779999875321     1111223456899999999999999999999986


Q ss_pred             CCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCCCcEE
Q 003185          580 SKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENIL  659 (840)
Q Consensus       580 ~~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKPeNIL  659 (840)
                      ..              ..++||||+++++|.+++..     ...+++..++.++.||+.||.|||++||+||||||+|||
T Consensus        86 ~~--------------~~~lv~e~~~~~~L~~~l~~-----~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil  146 (284)
T 2vgo_A           86 RK--------------RIYLMLEFAPRGELYKELQK-----HGRFDEQRSATFMEELADALHYCHERKVIHRDIKPENLL  146 (284)
T ss_dssp             SS--------------EEEEEECCCTTEEHHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEE
T ss_pred             CC--------------EEEEEEEeCCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEE
Confidence            54              35999999999999999986     246899999999999999999999999999999999999


Q ss_pred             EecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHHHHHH
Q 003185          660 IDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLL  739 (840)
Q Consensus       660 Ld~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLGvIL~  739 (840)
                      ++.+       +.+||+|||++.......            .....||+.|+|||++.+    ..++.++||||||+++|
T Consensus       147 ~~~~-------~~~kl~Dfg~~~~~~~~~------------~~~~~~~~~y~aPE~~~~----~~~~~~~Di~slG~il~  203 (284)
T 2vgo_A          147 MGYK-------GELKIADFGWSVHAPSLR------------RRTMCGTLDYLPPEMIEG----KTHDEKVDLWCAGVLCY  203 (284)
T ss_dssp             ECTT-------CCEEECCCTTCEECSSSC------------BCCCCSCGGGCCHHHHTT----CCBCTTHHHHHHHHHHH
T ss_pred             EcCC-------CCEEEecccccccCcccc------------cccccCCCCcCCHHHhcc----CCCCcccchhhHHHHHH
Confidence            9877       459999999986543311            123468999999999986    56789999999999999


Q ss_pred             HHHhCCCCCCCCCHHHHHHHHHcCCCCCcchHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC
Q 003185          740 ELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP  819 (840)
Q Consensus       740 ELLTG~~PF~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L~dLI~rCL~~DP~eRP  819 (840)
                      +|++|..||......+....+..... .++                           ...+..+.+||.+||..||.+||
T Consensus       204 ~l~~g~~pf~~~~~~~~~~~~~~~~~-~~~---------------------------~~~~~~~~~li~~~l~~~p~~Rp  255 (284)
T 2vgo_A          204 EFLVGMPPFDSPSHTETHRRIVNVDL-KFP---------------------------PFLSDGSKDLISKLLRYHPPQRL  255 (284)
T ss_dssp             HHHHSSCTTCCSSHHHHHHHHHTTCC-CCC---------------------------TTSCHHHHHHHHHHSCSSGGGSC
T ss_pred             HHHHCCCCCCCCCHhHHHHHHhcccc-CCC---------------------------CcCCHHHHHHHHHHhhcCHhhCC
Confidence            99999999998887777666655422 111                           11245789999999999999999


Q ss_pred             CHHHHHHHHHhhc
Q 003185          820 TAGDLYEMFVART  832 (840)
Q Consensus       820 Sa~ELLehLe~l~  832 (840)
                      |+.++++|..-..
T Consensus       256 s~~~ll~h~~~~~  268 (284)
T 2vgo_A          256 PLKGVMEHPWVKA  268 (284)
T ss_dssp             CHHHHHTCHHHHH
T ss_pred             CHHHHhhCHHHHh
Confidence            9999999865443


No 144
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00  E-value=6.9e-41  Score=377.72  Aligned_cols=266  Identities=20%  Similarity=0.282  Sum_probs=200.9

Q ss_pred             CCCceeeeeecccCceEEEEEEE--CCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeEEecCC
Q 003185          504 FPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK  581 (840)
Q Consensus       504 ~~~y~i~~~LG~G~fG~Vy~a~~--~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~l~g~~~~~~  581 (840)
                      .++|.+.+.||+|+||.||+|.+  .+..||+|++..+...............+.+|+.+|++++|||||++++++... 
T Consensus       134 ~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~-  212 (419)
T 3i6u_A          134 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAE-  212 (419)
T ss_dssp             HTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEESS-
T ss_pred             hccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEecC-
Confidence            47899999999999999999997  567999999875543322222122223458999999999999999999997533 


Q ss_pred             CCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCCCcEEEe
Q 003185          582 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID  661 (840)
Q Consensus       582 ~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKPeNILLd  661 (840)
                                    ..||||||+++|+|.+++..     ...+++..++.++.||+.||+|||++||+||||||+|||++
T Consensus       213 --------------~~~lv~e~~~~g~L~~~l~~-----~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~NIll~  273 (419)
T 3i6u_A          213 --------------DYYIVLELMEGGELFDKVVG-----NKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLS  273 (419)
T ss_dssp             --------------EEEEEEECCTTCBGGGGTSS-----SCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEES
T ss_pred             --------------ceEEEEEcCCCCcHHHHHhc-----cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEe
Confidence                          24999999999999988754     45799999999999999999999999999999999999997


Q ss_pred             cccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHHHHHHHH
Q 003185          662 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL  741 (840)
Q Consensus       662 ~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLGvIL~EL  741 (840)
                      .++    ....+||+|||+++.......           .....||+.|+|||++.+.. ...++.++|||||||+||+|
T Consensus       274 ~~~----~~~~~kl~DFG~a~~~~~~~~-----------~~~~~gt~~y~aPE~~~~~~-~~~~~~~~DiwslG~il~~l  337 (419)
T 3i6u_A          274 SQE----EDCLIKITDFGHSKILGETSL-----------MRTLCGTPTYLAPEVLVSVG-TAGYNRAVDCWSLGVILFIC  337 (419)
T ss_dssp             SSS----SSCCEEECCSSTTTSCC----------------------CTTCCTTTTC-----CTTHHHHHHHHHHHHHHHH
T ss_pred             cCC----CcceEEEeecccceecCCCcc-----------ccccCCCCCccCceeeecCC-CCCCCchhhhHhHHHHHHHH
Confidence            653    135699999999987643221           13356999999999986321 25678999999999999999


Q ss_pred             HhCCCCCCCCCH-HHHHHHHHcCCCCCcchHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCC
Q 003185          742 LTLQVPYMGLSE-LEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPT  820 (840)
Q Consensus       742 LTG~~PF~~~~~-~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L~dLI~rCL~~DP~eRPS  820 (840)
                      ++|..||..... ..+...+..+.....+..+                        ...++.+.+||.+||+.||.+|||
T Consensus       338 ltg~~pf~~~~~~~~~~~~i~~~~~~~~~~~~------------------------~~~~~~~~~li~~~L~~dP~~Rps  393 (419)
T 3i6u_A          338 LSGYPPFSEHRTQVSLKDQITSGKYNFIPEVW------------------------AEVSEKALDLVKKLLVVDPKARFT  393 (419)
T ss_dssp             HHSSCSSCCCSSSCCHHHHHHTTCCCCCHHHH------------------------TTSCHHHHHHHHHHSCSSTTTSCC
T ss_pred             HHCCCCCCCCcchHHHHHHHhcCCCCCCchhh------------------------cccCHHHHHHHHHHccCChhHCcC
Confidence            999999976533 3344555554433333221                        223568999999999999999999


Q ss_pred             HHHHHHHHH
Q 003185          821 AGDLYEMFV  829 (840)
Q Consensus       821 a~ELLehLe  829 (840)
                      ++++++|.+
T Consensus       394 ~~e~l~hp~  402 (419)
T 3i6u_A          394 TEEALRHPW  402 (419)
T ss_dssp             HHHHHHSGG
T ss_pred             HHHHhCCcc
Confidence            999999854


No 145
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00  E-value=3.3e-41  Score=364.22  Aligned_cols=276  Identities=22%  Similarity=0.278  Sum_probs=208.3

Q ss_pred             CCCCCceeeeeecccCceEEEEEEE-CCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeEEecC
Q 003185          502 GSFPSLSSCDEAGKSVSSSLFRCKF-GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISS  580 (840)
Q Consensus       502 ~~~~~y~i~~~LG~G~fG~Vy~a~~-~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~l~g~~~~~  580 (840)
                      ...++|++.+.||+|+||.||+|.+ .+..||+|+....    .....+.    +.+|+.+++.++||||+++++++...
T Consensus        36 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~----~~~~~~~----~~~E~~~l~~l~h~~iv~~~~~~~~~  107 (321)
T 2qkw_B           36 EATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPE----SSQGIEE----FETEIETLSFCRHPHLVSLIGFCDER  107 (321)
T ss_dssp             CCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSC----CSSHHHH----HHHHHHGGGSCCCTTBCCEEEECCCT
T ss_pred             HHHhccCccceeecCCCeeEEEEEECCCCEEEEEEeccc----ChHHHHH----HHHHHHHHHhCCCCCEeeEEEEEcCC
Confidence            3567899999999999999999997 4778999975432    1122333    48999999999999999999998765


Q ss_pred             CCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCCCcEEE
Q 003185          581 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILI  660 (840)
Q Consensus       581 ~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKPeNILL  660 (840)
                      ..              .++||||+++|+|.+++... ......+++..++.++.||+.||.|||++||+||||||+|||+
T Consensus       108 ~~--------------~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~  172 (321)
T 2qkw_B          108 NE--------------MILIYKYMENGNLKRHLYGS-DLPTMSMSWEQRLEICIGAARGLHYLHTRAIIHRDVKSINILL  172 (321)
T ss_dssp             TC--------------CEEEEECCTTCBTGGGSSSS-CCCSCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCSTTEEE
T ss_pred             Ce--------------EEEEEEcCCCCcHHHHHhcc-CCCccccCHHHHHHHHHHHHHHHHHhcCCCeecCCCCHHHEEE
Confidence            54              39999999999999998641 1122458999999999999999999999999999999999999


Q ss_pred             ecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHHHHHHH
Q 003185          661 DLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLE  740 (840)
Q Consensus       661 d~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLGvIL~E  740 (840)
                      +.+       +.+||+|||+++........        .......||+.|+|||++.+    ..++.++|||||||++||
T Consensus       173 ~~~-------~~~kl~Dfg~~~~~~~~~~~--------~~~~~~~gt~~y~aPE~~~~----~~~~~~~Di~slG~il~e  233 (321)
T 2qkw_B          173 DEN-------FVPKITDFGISKKGTELDQT--------HLSTVVKGTLGYIDPEYFIK----GRLTEKSDVYSFGVVLFE  233 (321)
T ss_dssp             CTT-------CCEEECCCTTCEECSSSSCC--------CCBCCCEEETTTCCHHHHHH----CBCCTHHHHHHHHHHHHH
T ss_pred             CCC-------CCEEEeeccccccccccccc--------ccccccCCCccccCHHHhcC----CCCCcccchHhHHHHHHH
Confidence            876       56999999999765432111        11123458999999999986    568999999999999999


Q ss_pred             HHhCCCCCCCCCHHHHHHHHH----cCCCCCcchHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCC
Q 003185          741 LLTLQVPYMGLSELEIHDLIQ----MGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPT  816 (840)
Q Consensus       741 LLTG~~PF~~~~~~el~~~I~----~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L~dLI~rCL~~DP~  816 (840)
                      |++|+.||.+..+.+....+.    ......+..            ....   ..........+..+.+|+.+||+.||.
T Consensus       234 ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~---~~~~~~~~~~~~~l~~li~~~l~~dP~  298 (321)
T 2qkw_B          234 VLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQ------------IVDP---NLADKIRPESLRKFGDTAVKCLALSSE  298 (321)
T ss_dssp             HHHCCTTCSCSSSSSCCCHHHHTHHHHTTTCCCS------------SSSS---SCTTCSCHHHHHHHHHHHHHHTCSSGG
T ss_pred             HHhCCCcccccCcHHHHHHHHHhhhccccccHHH------------hcCh---hhccccCHHHHHHHHHHHHHHcCCCcc
Confidence            999999997654322111110    000000000            0000   001122345678899999999999999


Q ss_pred             CCCCHHHHHHHHHhhcCC
Q 003185          817 ERPTAGDLYEMFVARTSS  834 (840)
Q Consensus       817 eRPSa~ELLehLe~l~~~  834 (840)
                      +|||+.+|+++|+.+...
T Consensus       299 ~Rps~~ell~~L~~~l~~  316 (321)
T 2qkw_B          299 DRPSMGDVLWKLEYALRL  316 (321)
T ss_dssp             GSCCHHHHHHHHHHHHHS
T ss_pred             cCcCHHHHHHHHHHHhhc
Confidence            999999999999987643


No 146
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00  E-value=1.8e-40  Score=361.35  Aligned_cols=257  Identities=24%  Similarity=0.278  Sum_probs=187.2

Q ss_pred             CCCceee---eeecccCceEEEEEEE--CCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCC-CCCcceeeeEE
Q 003185          504 FPSLSSC---DEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALR-HSCIVEMYGHK  577 (840)
Q Consensus       504 ~~~y~i~---~~LG~G~fG~Vy~a~~--~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~-HpNIV~l~g~~  577 (840)
                      +.+|++.   +.||+|+||.||+|.+  .+..+|+|++...       ..    ..+.+|+.+++.+. ||||+++++++
T Consensus         7 ~~~y~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-------~~----~~~~~e~~~l~~l~~h~niv~~~~~~   75 (325)
T 3kn6_A            7 YQHYDLDLKDKPLGEGSFSICRKCVHKKSNQAFAVKIISKR-------ME----ANTQKEITALKLCEGHPNIVKLHEVF   75 (325)
T ss_dssp             HHHEEECTTSCCSEEETTEEEEEEEETTTCCEEEEEEEEGG-------GH----HHHHHHHHHHHHTTTCTTBCCEEEEE
T ss_pred             hhccccccCCCccccCCCeEEEEEEECCCCCEEEEEEEChh-------hh----hhHHHHHHHHHHhcCCCCeeEEEEEE
Confidence            3456664   7899999999999998  4778999997422       11    23378999999997 99999999999


Q ss_pred             ecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCCCc
Q 003185          578 ISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSEN  657 (840)
Q Consensus       578 ~~~~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKPeN  657 (840)
                      ....              ..||||||+++|+|.+++..     ...+++..++.++.||+.||.|||++||+||||||+|
T Consensus        76 ~~~~--------------~~~lv~e~~~~~~L~~~l~~-----~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~N  136 (325)
T 3kn6_A           76 HDQL--------------HTFLVMELLNGGELFERIKK-----KKHFSETEASYIMRKLVSAVSHMHDVGVVHRDLKPEN  136 (325)
T ss_dssp             ECSS--------------EEEEEECCCCSCBHHHHHHH-----CSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGG
T ss_pred             EcCC--------------EEEEEEEccCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCHHH
Confidence            8655              35999999999999999986     3579999999999999999999999999999999999


Q ss_pred             EEEecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHHHH
Q 003185          658 ILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCL  737 (840)
Q Consensus       658 ILLd~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLGvI  737 (840)
                      ||++.++    ....+||+|||+++........          .....||+.|+|||++.+    ..++.++|||||||+
T Consensus       137 Ill~~~~----~~~~~kl~Dfg~a~~~~~~~~~----------~~~~~~t~~y~aPE~~~~----~~~~~~~DiwslG~i  198 (325)
T 3kn6_A          137 LLFTDEN----DNLEIKIIDFGFARLKPPDNQP----------LKTPCFTLHYAAPELLNQ----NGYDESCDLWSLGVI  198 (325)
T ss_dssp             EEEEC--------CEEEECCCTTCEECCC------------------------------------CCCCHHHHHHHHHHH
T ss_pred             EEEecCC----CcccEEEeccccceecCCCCCc----------ccccCCCcCccCHHHhcC----CCCCCccchHHHHHH
Confidence            9998653    2247999999999765432111          123468999999999976    678999999999999


Q ss_pred             HHHHHhCCCCCCCCCH-------HHHHHHHHcCCCCCcchHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHh
Q 003185          738 LLELLTLQVPYMGLSE-------LEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRC  810 (840)
Q Consensus       738 L~ELLTG~~PF~~~~~-------~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L~dLI~rC  810 (840)
                      +|+|++|..||.+...       .++...+..+..+...                        ......++.+.+||.+|
T Consensus       199 l~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~~~~~~~~------------------------~~~~~~s~~~~~li~~~  254 (325)
T 3kn6_A          199 LYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEG------------------------EAWKNVSQEAKDLIQGL  254 (325)
T ss_dssp             HHHHHHSSCTTC-------CCCHHHHHHHHTTTCCCCCS------------------------HHHHTSCHHHHHHHHHH
T ss_pred             HHHHHhCCCCCCCCccccccccHHHHHHHHHcCCCCCCc------------------------ccccCCCHHHHHHHHHH
Confidence            9999999999976432       3455555444322111                        11233466899999999


Q ss_pred             cccCCCCCCCHHHHHHHHHhhc
Q 003185          811 TEENPTERPTAGDLYEMFVART  832 (840)
Q Consensus       811 L~~DP~eRPSa~ELLehLe~l~  832 (840)
                      |..||.+|||+.++++|.+-..
T Consensus       255 L~~dP~~Rpt~~ell~h~w~~~  276 (325)
T 3kn6_A          255 LTVDPNKRLKMSGLRYNEWLQD  276 (325)
T ss_dssp             HCCCTTTCCCTTTSTTCGGGCT
T ss_pred             CCCChhHCCCHHHHhcChhhcc
Confidence            9999999999999999966544


No 147
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00  E-value=3e-40  Score=348.41  Aligned_cols=259  Identities=22%  Similarity=0.374  Sum_probs=210.9

Q ss_pred             CCCCCceeeeeecccCceEEEEEEEC-CeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeEEecC
Q 003185          502 GSFPSLSSCDEAGKSVSSSLFRCKFG-SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISS  580 (840)
Q Consensus       502 ~~~~~y~i~~~LG~G~fG~Vy~a~~~-~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~l~g~~~~~  580 (840)
                      ...++|++.+.||+|+||.||+|.+. +..+|+|+.....  ..   .+    .+.+|+.++++++||||+++++++...
T Consensus        10 v~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~---~~----~~~~E~~~l~~l~h~~i~~~~~~~~~~   80 (279)
T 1qpc_A           10 VPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS--MS---PD----AFLAEANLMKQLQHQRLVRLYAVVTQE   80 (279)
T ss_dssp             CCGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS--SC---HH----HHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred             cCHHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCc--cc---HH----HHHHHHHHHHhCCCcCcceEEEEEcCC
Confidence            44578999999999999999999985 4589999864322  11   22    348999999999999999999987633


Q ss_pred             CCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCCCcEEE
Q 003185          581 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILI  660 (840)
Q Consensus       581 ~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKPeNILL  660 (840)
                      .               .++||||+++++|.+++...   ....+++..++.++.||+.||.|||++||+||||||+|||+
T Consensus        81 ~---------------~~~v~e~~~~~~L~~~l~~~---~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~  142 (279)
T 1qpc_A           81 P---------------IYIITEYMENGSLVDFLKTP---SGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILV  142 (279)
T ss_dssp             S---------------CEEEEECCTTCBHHHHTTSH---HHHTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE
T ss_pred             C---------------cEEEEecCCCCCHHHHHhcC---CCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHhhEEE
Confidence            2               39999999999999998641   11258999999999999999999999999999999999999


Q ss_pred             ecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHHHHHHH
Q 003185          661 DLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLE  740 (840)
Q Consensus       661 d~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLGvIL~E  740 (840)
                      +.+       +.+||+|||++..........         .....+|+.|+|||++.+    ..++.++||||||+++||
T Consensus       143 ~~~-------~~~kl~Dfg~~~~~~~~~~~~---------~~~~~~~~~y~aPE~~~~----~~~~~~~Di~slG~il~e  202 (279)
T 1qpc_A          143 SDT-------LSCKIADFGLARLIEDNEYTA---------REGAKFPIKWTAPEAINY----GTFTIKSDVWSFGILLTE  202 (279)
T ss_dssp             CTT-------SCEEECCCTTCEECSSSCEEC---------CTTCCCCTTTSCHHHHHH----CEECHHHHHHHHHHHHHH
T ss_pred             cCC-------CCEEECCCcccccccCccccc---------ccCCCCccCccChhhhcc----CCCCchhhhHHHHHHHHH
Confidence            876       469999999998765422110         122357889999999986    567899999999999999


Q ss_pred             HHh-CCCCCCCCCHHHHHHHHHcCCCCCcchHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC
Q 003185          741 LLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP  819 (840)
Q Consensus       741 LLT-G~~PF~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L~dLI~rCL~~DP~eRP  819 (840)
                      |++ |..||.+....++...+..+..+..+.                           ..+..+.+||.+||..||.+||
T Consensus       203 l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~l~~li~~~l~~~p~~Rp  255 (279)
T 1qpc_A          203 IVTHGRIPYPGMTNPEVIQNLERGYRMVRPD---------------------------NCPEELYQLMRLCWKERPEDRP  255 (279)
T ss_dssp             HHTTTCCSSTTCCHHHHHHHHHTTCCCCCCT---------------------------TCCHHHHHHHHHHTCSSGGGSC
T ss_pred             HHhCCCCCCcccCHHHHHHHHhcccCCCCcc---------------------------cccHHHHHHHHHHhccChhhCC
Confidence            999 999999988888877776654332221                           1245799999999999999999


Q ss_pred             CHHHHHHHHHhhcCC
Q 003185          820 TAGDLYEMFVARTSS  834 (840)
Q Consensus       820 Sa~ELLehLe~l~~~  834 (840)
                      |+.+|++.|+.+...
T Consensus       256 s~~~l~~~l~~~~~~  270 (279)
T 1qpc_A          256 TFDYLRSVLEDFFTA  270 (279)
T ss_dssp             CHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHh
Confidence            999999999887643


No 148
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00  E-value=8.5e-40  Score=362.01  Aligned_cols=283  Identities=17%  Similarity=0.216  Sum_probs=206.8

Q ss_pred             CCCCceeeeeecccCceEEEEEEE--CCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeEEecC
Q 003185          503 SFPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISS  580 (840)
Q Consensus       503 ~~~~y~i~~~LG~G~fG~Vy~a~~--~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~l~g~~~~~  580 (840)
                      .+++|++.+.||+|+||.||+|.+  .+..||+|++....  ......+    .+.+|+.+++.++||||+++++++...
T Consensus        23 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~----~~~~E~~~l~~l~hpniv~~~~~~~~~   96 (371)
T 2xrw_A           23 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPF--QNQTHAK----RAYRELVLMKCVNHKNIIGLLNVFTPQ   96 (371)
T ss_dssp             EETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTT--SSHHHHH----HHHHHHHHHHHCCCTTBCCEEEEECSC
T ss_pred             hhhheeEeeeeEecCCEEEEEEEECCCCceEEEEEecccc--CChHHHH----HHHHHHHHHHhcCCCCccceEEeeccc
Confidence            457899999999999999999987  57889999875332  2223333    348999999999999999999998765


Q ss_pred             CCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCCCcEEE
Q 003185          581 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILI  660 (840)
Q Consensus       581 ~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKPeNILL  660 (840)
                      ...        ......||||||++ ++|.+++.       ..+++..+..++.||+.||.|||++||+||||||+|||+
T Consensus        97 ~~~--------~~~~~~~lv~e~~~-~~l~~~~~-------~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIl~  160 (371)
T 2xrw_A           97 KSL--------EEFQDVYIVMELMD-ANLCQVIQ-------MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV  160 (371)
T ss_dssp             CST--------TTCCEEEEEEECCS-EEHHHHHH-------SCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE
T ss_pred             ccc--------ccccceEEEEEcCC-CCHHHHHh-------hccCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEE
Confidence            422        12235799999997 48988885       248999999999999999999999999999999999999


Q ss_pred             ecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHHHHHHH
Q 003185          661 DLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLE  740 (840)
Q Consensus       661 d~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLGvIL~E  740 (840)
                      +.+       +.+||+|||+++.......           .....||+.|+|||++.+    ..++.++|||||||++|+
T Consensus       161 ~~~-------~~~kl~Dfg~a~~~~~~~~-----------~~~~~gt~~y~aPE~~~~----~~~~~~~DiwslG~il~e  218 (371)
T 2xrw_A          161 KSD-------CTLKILDFGLARTAGTSFM-----------MTPYVVTRYYRAPEVILG----MGYKENVDIWSVGCIMGE  218 (371)
T ss_dssp             CTT-------SCEEECCCCC---------------------------CTTCCHHHHTT----CCCCTTHHHHHHHHHHHH
T ss_pred             cCC-------CCEEEEEeecccccccccc-----------cCCceecCCccCHHHhcC----CCCCchHhHHHHHHHHHH
Confidence            877       4699999999976543211           123468999999999986    568899999999999999


Q ss_pred             HHhCCCCCCCCCHHHHHHHHHcCCCCCcchHHhhhccCccccccccCCC---------------CCCchhhhhhHHHHHH
Q 003185          741 LLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSG---------------FEKPEAELETLSFLVD  805 (840)
Q Consensus       741 LLTG~~PF~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~s~~L~d  805 (840)
                      |++|..||.+.+..+....+........++.+..+...... +......               ..........+..+.+
T Consensus       219 l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  297 (371)
T 2xrw_A          219 MIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRT-YVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARD  297 (371)
T ss_dssp             HHHSSCSSCCSSHHHHHHHHHC-CCCCCHHHHTTSCHHHHH-HHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHH
T ss_pred             HHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHHHH-HHhhCccccccchhhhcccccCcccccccccccHHHHH
Confidence            99999999999888888777766444434333221100000 0000000               0011122334678999


Q ss_pred             HHHHhcccCCCCCCCHHHHHHHHHh
Q 003185          806 VFRRCTEENPTERPTAGDLYEMFVA  830 (840)
Q Consensus       806 LI~rCL~~DP~eRPSa~ELLehLe~  830 (840)
                      ||.+||..||.+|||++|+++|..-
T Consensus       298 li~~mL~~dP~~R~t~~e~l~hp~~  322 (371)
T 2xrw_A          298 LLSKMLVIDASKRISVDEALQHPYI  322 (371)
T ss_dssp             HHHHHSCSSGGGSCCHHHHHHSHHH
T ss_pred             HHHHHCcCChhhCCCHHHHhCCcch
Confidence            9999999999999999999999653


No 149
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00  E-value=3.6e-40  Score=357.02  Aligned_cols=265  Identities=23%  Similarity=0.335  Sum_probs=207.9

Q ss_pred             CCCCCceeeeeecccCceEEEEEEECC-------eeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhC-CCCCccee
Q 003185          502 GSFPSLSSCDEAGKSVSSSLFRCKFGS-------ADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEM  573 (840)
Q Consensus       502 ~~~~~y~i~~~LG~G~fG~Vy~a~~~~-------~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L-~HpNIV~l  573 (840)
                      ...++|.+.+.||+|+||.||+|.+.+       ..+|+|+....   ......+    .+.+|+.+++++ +||||+++
T Consensus        43 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~----~~~~E~~~l~~l~~h~~iv~~  115 (333)
T 2i1m_A           43 FPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKST---AHADEKE----ALMSELKIMSHLGQHENIVNL  115 (333)
T ss_dssp             CCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTT---CCHHHHH----HHHHHHHHHHHHCCCTTBCCE
T ss_pred             CCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccc---cChHHHH----HHHHHHHHHHhhcCCCCeeeE
Confidence            456789999999999999999999732       36889886432   1223333    348999999999 89999999


Q ss_pred             eeEEecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhcc---------CCCCCCHHHHHHHHHHHHHHHHHHH
Q 003185          574 YGHKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSET---------GEKHVSVKLALFIAQDVAAALVELH  644 (840)
Q Consensus       574 ~g~~~~~~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~---------~~~~ls~~~~~~Ia~QIa~AL~yLH  644 (840)
                      ++++......              ++||||+++|+|.+++......         ....+++..++.++.||+.||.|||
T Consensus       116 ~~~~~~~~~~--------------~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH  181 (333)
T 2i1m_A          116 LGACTHGGPV--------------LVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLA  181 (333)
T ss_dssp             EEEECSSSSC--------------EEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEecCCce--------------EEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHh
Confidence            9999866543              9999999999999999863211         1245899999999999999999999


Q ss_pred             hCCeecccCCCCcEEEecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCC
Q 003185          645 SKHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNL  724 (840)
Q Consensus       645 s~gIVHRDLKPeNILLd~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~  724 (840)
                      ++||+||||||+|||++.+       +.+||+|||++..........        ......||+.|+|||++.+    ..
T Consensus       182 ~~~ivH~Dlkp~NIl~~~~-------~~~kl~Dfg~~~~~~~~~~~~--------~~~~~~~~~~y~aPE~~~~----~~  242 (333)
T 2i1m_A          182 SKNCIHRDVAARNVLLTNG-------HVAKIGDFGLARDIMNDSNYI--------VKGNARLPVKWMAPESIFD----CV  242 (333)
T ss_dssp             HTTEECSCCSGGGCEEEGG-------GEEEBCCCGGGCCGGGCTTSE--------ECSSCEECGGGSCHHHHHH----CC
T ss_pred             cCCcccCCcccceEEECCC-------CeEEECcccccccccccccee--------ecCCCCCCccccCHHHhcc----CC
Confidence            9999999999999999877       469999999998664322110        1123457889999999986    66


Q ss_pred             CCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHH-HHHHcCCCCCcchHHhhhccCccccccccCCCCCCchhhhhhHHH
Q 003185          725 YGLEVDIWSYGCLLLELLT-LQVPYMGLSELEIH-DLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSF  802 (840)
Q Consensus       725 ~s~kSDVWSLGvIL~ELLT-G~~PF~~~~~~el~-~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~  802 (840)
                      ++.++|||||||++|+|+| |..||.+....... ..+.....+..+.                           ..+..
T Consensus       243 ~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~  295 (333)
T 2i1m_A          243 YTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPA---------------------------FAPKN  295 (333)
T ss_dssp             CCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSHHHHHHHHHTCCCCCCT---------------------------TCCHH
T ss_pred             CChHHHHHHHHHHHHHHHcCCCCCCcccchhHHHHHHHhcCCCCCCCC---------------------------CCCHH
Confidence            8999999999999999999 99999876544433 3333332222111                           12457


Q ss_pred             HHHHHHHhcccCCCCCCCHHHHHHHHHhhcC
Q 003185          803 LVDVFRRCTEENPTERPTAGDLYEMFVARTS  833 (840)
Q Consensus       803 L~dLI~rCL~~DP~eRPSa~ELLehLe~l~~  833 (840)
                      +.+||.+||+.||.+|||+.+|+++|+.+..
T Consensus       296 l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~  326 (333)
T 2i1m_A          296 IYSIMQACWALEPTHRPTFQQICSFLQEQAQ  326 (333)
T ss_dssp             HHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhccChhhCcCHHHHHHHHHHHHH
Confidence            8999999999999999999999999988753


No 150
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00  E-value=2.3e-40  Score=354.50  Aligned_cols=267  Identities=23%  Similarity=0.358  Sum_probs=209.0

Q ss_pred             CCCCCceeeeeecccCceEEEEEEE-------CCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhC-CCCCccee
Q 003185          502 GSFPSLSSCDEAGKSVSSSLFRCKF-------GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEM  573 (840)
Q Consensus       502 ~~~~~y~i~~~LG~G~fG~Vy~a~~-------~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L-~HpNIV~l  573 (840)
                      ...++|++.+.||+|+||.||+|.+       .+..||+|+....   ......+    .+.+|+.++.++ +||||+++
T Consensus        24 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~----~~~~E~~~l~~l~~hp~iv~~   96 (316)
T 2xir_A           24 FPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEG---ATHSEHR----ALMSELKILIHIGHHLNVVNL   96 (316)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTT---CCHHHHH----HHHHHHHHHHHHCCCTTBCCE
T ss_pred             cchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccC---CCcHHHH----HHHHHHHHHHhcccCCCeeeE
Confidence            3457899999999999999999985       3478999986432   2223333    348999999999 69999999


Q ss_pred             eeEEecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhcc-----------CCCCCCHHHHHHHHHHHHHHHHH
Q 003185          574 YGHKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSET-----------GEKHVSVKLALFIAQDVAAALVE  642 (840)
Q Consensus       574 ~g~~~~~~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~-----------~~~~ls~~~~~~Ia~QIa~AL~y  642 (840)
                      ++++.....             ..++||||+++++|.+++......           ....+++..++.++.||+.||.|
T Consensus        97 ~~~~~~~~~-------------~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~  163 (316)
T 2xir_A           97 LGACTKPGG-------------PLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEF  163 (316)
T ss_dssp             EEEECCTTS-------------CCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHH
T ss_pred             EEEEecCCC-------------ceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHH
Confidence            999875432             249999999999999999752110           01238899999999999999999


Q ss_pred             HHhCCeecccCCCCcEEEecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCC
Q 003185          643 LHSKHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKP  722 (840)
Q Consensus       643 LHs~gIVHRDLKPeNILLd~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~  722 (840)
                      ||++||+||||||+|||++.+       +.+||+|||+++.........        ......||+.|+|||++.+    
T Consensus       164 lH~~~i~H~dikp~Nil~~~~-------~~~kl~Dfg~~~~~~~~~~~~--------~~~~~~~t~~y~aPE~~~~----  224 (316)
T 2xir_A          164 LASRKCIHRDLAARNILLSEK-------NVVKICDFGLARDIYKDPDYV--------RKGDARLPLKWMAPETIFD----  224 (316)
T ss_dssp             HHHTTCCCSCCSGGGEEECGG-------GCEEECCCGGGSCTTTCTTSE--------EETTEEECGGGCCHHHHHH----
T ss_pred             HHhCCcccccCccceEEECCC-------CCEEECCCccccccccCccce--------eccCCCcceeecCchhhcc----
Confidence            999999999999999999877       459999999998654322110        0123457899999999986    


Q ss_pred             CCCCchhhHHHHHHHHHHHHh-CCCCCCCCCH-HHHHHHHHcCCCCCcchHHhhhccCccccccccCCCCCCchhhhhhH
Q 003185          723 NLYGLEVDIWSYGCLLLELLT-LQVPYMGLSE-LEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETL  800 (840)
Q Consensus       723 ~~~s~kSDVWSLGvIL~ELLT-G~~PF~~~~~-~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s  800 (840)
                      ..++.++|||||||++|+|+| |..||.+... ..+...+..+..+..+.                           ..+
T Consensus       225 ~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~  277 (316)
T 2xir_A          225 RVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPD---------------------------YTT  277 (316)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHHHHHHHHHTCCCCCCT---------------------------TCC
T ss_pred             ccccchhHHHHHHHHHHHHHhCCCCCCcccchhHHHHHHhccCccCCCCC---------------------------CCC
Confidence            678999999999999999998 9999987653 34444454443332221                           124


Q ss_pred             HHHHHHHHHhcccCCCCCCCHHHHHHHHHhhcCC
Q 003185          801 SFLVDVFRRCTEENPTERPTAGDLYEMFVARTSS  834 (840)
Q Consensus       801 ~~L~dLI~rCL~~DP~eRPSa~ELLehLe~l~~~  834 (840)
                      +.+.+||.+||+.||.+|||+.+|+++|+.+.+.
T Consensus       278 ~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~  311 (316)
T 2xir_A          278 PEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA  311 (316)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhh
Confidence            5789999999999999999999999999988754


No 151
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00  E-value=2.9e-40  Score=353.05  Aligned_cols=256  Identities=28%  Similarity=0.401  Sum_probs=211.8

Q ss_pred             CCCCCceeeeeecccCceEEEEEEE--CCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeEEec
Q 003185          502 GSFPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKIS  579 (840)
Q Consensus       502 ~~~~~y~i~~~LG~G~fG~Vy~a~~--~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~l~g~~~~  579 (840)
                      ..-+.|++.+.||+|+||.||+|.+  .+..+|+|++......   ...+    .+.+|+.+++.++||||+++++++..
T Consensus        19 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~---~~~~----~~~~e~~~l~~l~h~~i~~~~~~~~~   91 (303)
T 3a7i_A           19 DPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAE---DEIE----DIQQEITVLSQCDSPYVTKYYGSYLK   91 (303)
T ss_dssp             CGGGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCS---TTHH----HHHHHHHHHHHCCCTTBCCEEEEEEE
T ss_pred             ChHHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccH---HHHH----HHHHHHHHHHhCCCCCEeEEEEEEec
Confidence            3446799999999999999999987  5778999997654321   1223    34899999999999999999999986


Q ss_pred             CCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCCCcEE
Q 003185          580 SKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENIL  659 (840)
Q Consensus       580 ~~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKPeNIL  659 (840)
                      ...              .++||||+++++|.+++..      ..+++..++.++.||+.||.|||++||+||||||+|||
T Consensus        92 ~~~--------------~~lv~e~~~~~~L~~~~~~------~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil  151 (303)
T 3a7i_A           92 DTK--------------LWIIMEYLGGGSALDLLEP------GPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVL  151 (303)
T ss_dssp             TTE--------------EEEEEECCTTEEHHHHHTT------SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEE
T ss_pred             CCe--------------EEEEEEeCCCCcHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChheEE
Confidence            553              5999999999999999863      56899999999999999999999999999999999999


Q ss_pred             EecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHHHHHH
Q 003185          660 IDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLL  739 (840)
Q Consensus       660 Ld~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLGvIL~  739 (840)
                      ++.+       +.+||+|||++.........          .....||+.|+|||++.+    ..++.++||||||+++|
T Consensus       152 ~~~~-------~~~kl~Dfg~~~~~~~~~~~----------~~~~~~~~~y~aPE~~~~----~~~~~~~Di~slG~il~  210 (303)
T 3a7i_A          152 LSEH-------GEVKLADFGVAGQLTDTQIK----------RNTFVGTPFWMAPEVIKQ----SAYDSKADIWSLGITAI  210 (303)
T ss_dssp             ECTT-------SCEEECCCTTCEECBTTBCC----------BCCCCSCGGGCCHHHHTT----CCBCTHHHHHHHHHHHH
T ss_pred             ECCC-------CCEEEeecccceecCccccc----------cCccCCCcCccCHHHHhc----CCCCchhhhHHHHHHHH
Confidence            9877       45999999999776432211          123468999999999976    56789999999999999


Q ss_pred             HHHhCCCCCCCCCHHHHHHHHHcCCCCCcchHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC
Q 003185          740 ELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP  819 (840)
Q Consensus       740 ELLTG~~PF~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L~dLI~rCL~~DP~eRP  819 (840)
                      +|++|..||...........+.....+.++.                           ..+..+.+||.+||..||.+||
T Consensus       211 ~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~l~~li~~~l~~dp~~Rp  263 (303)
T 3a7i_A          211 ELARGEPPHSELHPMKVLFLIPKNNPPTLEG---------------------------NYSKPLKEFVEACLNKEPSFRP  263 (303)
T ss_dssp             HHHHSSCTTTTSCHHHHHHHHHHSCCCCCCS---------------------------SCCHHHHHHHHHHCCSSGGGSC
T ss_pred             HHccCCCCCCCcCHHHHHHHhhcCCCCCCcc---------------------------ccCHHHHHHHHHHcCCChhhCc
Confidence            9999999999888887777766554433321                           1245789999999999999999


Q ss_pred             CHHHHHHHHHhhc
Q 003185          820 TAGDLYEMFVART  832 (840)
Q Consensus       820 Sa~ELLehLe~l~  832 (840)
                      |+.+|++|..-..
T Consensus       264 s~~~ll~~~~~~~  276 (303)
T 3a7i_A          264 TAKELLKHKFILR  276 (303)
T ss_dssp             CHHHHTTCHHHHH
T ss_pred             CHHHHhhChhhhc
Confidence            9999999876544


No 152
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=8.7e-40  Score=353.13  Aligned_cols=271  Identities=25%  Similarity=0.362  Sum_probs=200.5

Q ss_pred             CCCCceeeeeecccCceEEEEEEECCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhC--CCCCcceeeeEEecC
Q 003185          503 SFPSLSSCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL--RHSCIVEMYGHKISS  580 (840)
Q Consensus       503 ~~~~y~i~~~LG~G~fG~Vy~a~~~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L--~HpNIV~l~g~~~~~  580 (840)
                      ..++|++.+.||+|+||.||+|++.+..||+|++...       ....+    .+|.+++..+  +||||+++++++...
T Consensus        35 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~-------~~~~~----~~e~~~~~~~~~~h~~i~~~~~~~~~~  103 (337)
T 3mdy_A           35 IAKQIQMVKQIGKGRYGEVWMGKWRGEKVAVKVFFTT-------EEASW----FRETEIYQTVLMRHENILGFIAADIKG  103 (337)
T ss_dssp             HHHHCEEEEEEEEETTEEEEEEEETTEEEEEEEEEGG-------GHHHH----HHHHHHHTSTTCCCTTBCCEEEEEEES
T ss_pred             cccceEEEeEeecCCCeEEEEEEECCceEEEEEEecc-------ccchh----hhHHHHHHHHhhcCCCeeeEEEEEccC
Confidence            3468999999999999999999999999999997432       11122    4555555554  899999999998865


Q ss_pred             CCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhC--------Ceeccc
Q 003185          581 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSK--------HIMHRD  652 (840)
Q Consensus       581 ~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~--------gIVHRD  652 (840)
                      ..          .....++||||+++|+|.+++..      ..+++..++.++.||+.||.|||++        ||+|||
T Consensus       104 ~~----------~~~~~~lv~e~~~~g~L~~~l~~------~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~D  167 (337)
T 3mdy_A          104 TG----------SWTQLYLITDYHENGSLYDYLKS------TTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRD  167 (337)
T ss_dssp             CG----------GGCEEEEEECCCTTCBHHHHHHH------CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSC
T ss_pred             CC----------CCCceEEEEeccCCCcHHHHhhc------cCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecc
Confidence            31          12356999999999999999976      4699999999999999999999999        999999


Q ss_pred             CCCCcEEEecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCC--CCchhh
Q 003185          653 IKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNL--YGLEVD  730 (840)
Q Consensus       653 LKPeNILLd~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~--~s~kSD  730 (840)
                      |||+|||++.+       +.+||+|||+++.+.......      ........||+.|+|||++.+......  ++.++|
T Consensus       168 ikp~Nill~~~-------~~~kl~Dfg~a~~~~~~~~~~------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~D  234 (337)
T 3mdy_A          168 LKSKNILVKKN-------GTCCIADLGLAVKFISDTNEV------DIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMAD  234 (337)
T ss_dssp             CCGGGEEECTT-------SCEEECCCTTCEECC---------------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHH
T ss_pred             cchHHEEECCC-------CCEEEEeCCCceeeccccccc------cCCCCCCccCcceeChhhcccccCCccccCccccc
Confidence            99999999877       469999999997664432211      011234579999999999976221110  112599


Q ss_pred             HHHHHHHHHHHHhC----------CCCCCCCC-----HHHHHHHHHcC-CCCCcchHHhhhccCccccccccCCCCCCch
Q 003185          731 IWSYGCLLLELLTL----------QVPYMGLS-----ELEIHDLIQMG-KRPRLTDELEALGSCHEHEVAQSGSGFEKPE  794 (840)
Q Consensus       731 VWSLGvIL~ELLTG----------~~PF~~~~-----~~el~~~I~~~-~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~  794 (840)
                      ||||||++|||+||          +.||....     .......+... ..+.++..                      .
T Consensus       235 iwslG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------~  292 (337)
T 3mdy_A          235 MYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSDPSYEDMREIVCIKKLRPSFPNR----------------------W  292 (337)
T ss_dssp             HHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGG----------------------G
T ss_pred             hHHHHHHHHHHHhccCcccccccccccHhhhcCCCCchhhhHHHHhhhccCcccccc----------------------c
Confidence            99999999999999          67775431     12222222111 22222211                      1


Q ss_pred             hhhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhcCCC
Q 003185          795 AELETLSFLVDVFRRCTEENPTERPTAGDLYEMFVARTSSS  835 (840)
Q Consensus       795 ~~~~~s~~L~dLI~rCL~~DP~eRPSa~ELLehLe~l~~~~  835 (840)
                      ....+++.+.+||.+||+.||.+|||+.+|+++|+.+..+.
T Consensus       293 ~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~  333 (337)
T 3mdy_A          293 SSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSESQ  333 (337)
T ss_dssp             GGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHTT
T ss_pred             hhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHHhhc
Confidence            12345778999999999999999999999999999987654


No 153
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00  E-value=3.3e-40  Score=366.47  Aligned_cols=293  Identities=18%  Similarity=0.183  Sum_probs=208.5

Q ss_pred             CCCCceeeeeecccCceEEEEEEE--CCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeEEecC
Q 003185          503 SFPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISS  580 (840)
Q Consensus       503 ~~~~y~i~~~LG~G~fG~Vy~a~~--~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~l~g~~~~~  580 (840)
                      ..++|++.+.||+|+||.||+|.+  .+..||+|++.....        ..    .+|+.+|+.++|||||++++++...
T Consensus         5 ~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~--------~~----~~E~~il~~l~hpnIv~l~~~~~~~   72 (383)
T 3eb0_A            5 SSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR--------YK----NRELDIMKVLDHVNIIKLVDYFYTT   72 (383)
T ss_dssp             -CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT--------SC----CHHHHHHTTCCCTTBCCEEEEEEEC
T ss_pred             ccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc--------hH----HHHHHHHHHcCCCCccchhheeeec
Confidence            457899999999999999999987  678999998753311        11    5799999999999999999998754


Q ss_pred             CCCCCCC-----------C-------------CCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHH
Q 003185          581 KWLPSAD-----------G-------------NPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDV  636 (840)
Q Consensus       581 ~~~p~~~-----------g-------------~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QI  636 (840)
                      .......           +             .........+|||||++ ++|.+++...... ...+++..++.++.||
T Consensus        73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~-~~~l~~~~~~~i~~qi  150 (383)
T 3eb0_A           73 GDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRS-GRSIPMNLISIYIYQL  150 (383)
T ss_dssp             -------------------------------------CCEEEEEECCCS-EEHHHHHHHHHHT-TCCCCHHHHHHHHHHH
T ss_pred             CcccccccccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhc-CCCCCHHHHHHHHHHH
Confidence            3100000           0             00012335799999998 5999888764333 3679999999999999


Q ss_pred             HHHHHHHHhCCeecccCCCCcEEEecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhh
Q 003185          637 AAALVELHSKHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVL  716 (840)
Q Consensus       637 a~AL~yLHs~gIVHRDLKPeNILLd~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL  716 (840)
                      +.||.|||++||+||||||+|||++...      +.+||+|||+++.......           .....||+.|+|||++
T Consensus       151 ~~aL~~LH~~gi~H~Dikp~Nil~~~~~------~~~kl~Dfg~a~~~~~~~~-----------~~~~~~t~~y~aPE~~  213 (383)
T 3eb0_A          151 FRAVGFIHSLGICHRDIKPQNLLVNSKD------NTLKLCDFGSAKKLIPSEP-----------SVAYICSRFYRAPELM  213 (383)
T ss_dssp             HHHHHHHHTTTEECSCCCGGGEEEETTT------TEEEECCCTTCEECCTTSC-----------CCCCCCCSSCCCHHHH
T ss_pred             HHHHHHHHHCcCccCccCHHHEEEcCCC------CcEEEEECCCCcccCCCCC-----------CcCcccCCCccCHHHh
Confidence            9999999999999999999999998431      5799999999986543221           1234689999999998


Q ss_pred             hcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCcchHHhhhccC-ccccccccCCCCCCchh
Q 003185          717 RAMHKPNLYGLEVDIWSYGCLLLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSC-HEHEVAQSGSGFEKPEA  795 (840)
Q Consensus       717 ~~~~~~~~~s~kSDVWSLGvIL~ELLTG~~PF~~~~~~el~~~I~~~~~p~l~~~l~~~~~~-~~~~~~~~~~~~~~~~~  795 (840)
                      .+   ...++.++|||||||++|||++|+.||.+.+..+....+.........+.+...... ....+.......-....
T Consensus       214 ~~---~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  290 (383)
T 3eb0_A          214 LG---ATEYTPSIDLWSIGCVFGELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKIL  290 (383)
T ss_dssp             TT---CSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHS
T ss_pred             cC---CCCCCcchhhhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhC
Confidence            75   245899999999999999999999999998887777666554222222222221100 00000000000000001


Q ss_pred             hhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 003185          796 ELETLSFLVDVFRRCTEENPTERPTAGDLYEMFV  829 (840)
Q Consensus       796 ~~~~s~~L~dLI~rCL~~DP~eRPSa~ELLehLe  829 (840)
                      ....+..+.+||.+||..||.+|||+.|+++|..
T Consensus       291 ~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~  324 (383)
T 3eb0_A          291 PEGTPSLAIDLLEQILRYEPDLRINPYEAMAHPF  324 (383)
T ss_dssp             CTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGG
T ss_pred             CCCCCHHHHHHHHHHccCChhhCCCHHHHhcCHH
Confidence            1224667999999999999999999999998843


No 154
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00  E-value=1.4e-40  Score=380.56  Aligned_cols=261  Identities=24%  Similarity=0.306  Sum_probs=213.3

Q ss_pred             CCCCceeeeeecccCceEEEEEEE--CCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeEEecC
Q 003185          503 SFPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISS  580 (840)
Q Consensus       503 ~~~~y~i~~~LG~G~fG~Vy~a~~--~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~l~g~~~~~  580 (840)
                      .-++|++.+.||+|+||.||+|.+  .+..+|+|++....... ....+    .+.+|+.+|++++|||||++++++...
T Consensus        24 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~-~~~~~----~~~~E~~~l~~l~hpniv~~~~~~~~~   98 (484)
T 3nyv_A           24 FSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQ-KTDKE----SLLREVQLLKQLDHPNIMKLYEFFEDK   98 (484)
T ss_dssp             HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCB-SSCHH----HHHHHHHHHTTCCCTTBCCEEEEEECS
T ss_pred             ccCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhccc-chHHH----HHHHHHHHHHhCCCCCCCcEEEEEEeC
Confidence            346799999999999999999998  57899999975443221 11222    348999999999999999999999865


Q ss_pred             CCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCCCcEEE
Q 003185          581 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILI  660 (840)
Q Consensus       581 ~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKPeNILL  660 (840)
                      .              ..|+||||+.+|+|.+++..     ...+++..++.++.||+.||.|||++||+||||||+|||+
T Consensus        99 ~--------------~~~lv~e~~~~~~L~~~~~~-----~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~  159 (484)
T 3nyv_A           99 G--------------YFYLVGEVYTGGELFDEIIS-----RKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLL  159 (484)
T ss_dssp             S--------------EEEEEECCCCSCBHHHHHHT-----CSCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE
T ss_pred             C--------------EEEEEEecCCCCCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEE
Confidence            5              35999999999999999875     4579999999999999999999999999999999999999


Q ss_pred             ecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHHHHHHH
Q 003185          661 DLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLE  740 (840)
Q Consensus       661 d~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLGvIL~E  740 (840)
                      +...    ..+.+||+|||++..+.....           .....||+.|+|||++.+     .++.++|||||||++|+
T Consensus       160 ~~~~----~~~~~kl~Dfg~a~~~~~~~~-----------~~~~~gt~~y~aPE~~~~-----~~~~~~DiwslG~il~~  219 (484)
T 3nyv_A          160 ESKS----KDANIRIIDFGLSTHFEASKK-----------MKDKIGTAYYIAPEVLHG-----TYDEKCDVWSTGVILYI  219 (484)
T ss_dssp             SSSS----TTCCEEECCTTHHHHBCCCCS-----------HHHHTTGGGTCCHHHHHT-----CCCTHHHHHHHHHHHHH
T ss_pred             ecCC----CCCcEEEEeeeeeEEcccccc-----------cccCCCCccccCceeecC-----CCCCcceeHHHHHHHHH
Confidence            6432    235799999999986643221           122469999999999974     57899999999999999


Q ss_pred             HHhCCCCCCCCCHHHHHHHHHcCCCCCcchHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCC
Q 003185          741 LLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPT  820 (840)
Q Consensus       741 LLTG~~PF~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L~dLI~rCL~~DP~eRPS  820 (840)
                      |++|.+||.+.+..++...+..+.......                        .....++.+.+||.+||..||.+|||
T Consensus       220 ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~------------------------~~~~~s~~~~~li~~~L~~dp~~R~s  275 (484)
T 3nyv_A          220 LLSGCPPFNGANEYDILKKVEKGKYTFELP------------------------QWKKVSESAKDLIRKMLTYVPSMRIS  275 (484)
T ss_dssp             HHHSSCSSCCSSHHHHHHHHHHCCCCCCSG------------------------GGGGSCHHHHHHHHHHTCSSGGGSCC
T ss_pred             HHHCCCCCCCCCHHHHHHHHHcCCCCCCCc------------------------ccccCCHHHHHHHHHHCCCChhHCcC
Confidence            999999999999998888887764321111                        11233568999999999999999999


Q ss_pred             HHHHHHHHHhh
Q 003185          821 AGDLYEMFVAR  831 (840)
Q Consensus       821 a~ELLehLe~l  831 (840)
                      +.++++|.+-.
T Consensus       276 ~~e~l~h~~~~  286 (484)
T 3nyv_A          276 ARDALDHEWIQ  286 (484)
T ss_dssp             HHHHHTSHHHH
T ss_pred             HHHHhhChhhc
Confidence            99999986543


No 155
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00  E-value=6.9e-40  Score=348.52  Aligned_cols=283  Identities=19%  Similarity=0.253  Sum_probs=207.7

Q ss_pred             CCCCceeeeeecccCceEEEEEEE--CCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeEEecC
Q 003185          503 SFPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISS  580 (840)
Q Consensus       503 ~~~~y~i~~~LG~G~fG~Vy~a~~--~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~l~g~~~~~  580 (840)
                      .+++|++.+.||+|+||.||+|.+  .+..+|+|++.....  ..    .....+.+|+.++++++||||+++++++...
T Consensus         1 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~   74 (299)
T 2r3i_A            1 XMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTE--TE----GVPSTAIREISLLKELNHPNIVKLLDVIHTE   74 (299)
T ss_dssp             -CTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------------CCHHHHHHHHHHTTCCCTTBCCEEEEEEET
T ss_pred             CcchhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCcc--ch----hhHHHHHHHHHHHHHcCCCCeeeEEEEEecC
Confidence            368999999999999999999998  478899998653321  11    1123448999999999999999999999865


Q ss_pred             CCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCCCcEEE
Q 003185          581 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILI  660 (840)
Q Consensus       581 ~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKPeNILL  660 (840)
                      ..              .++||||+. ++|.+++..   .....+++..++.++.||+.||.|||++||+||||||+|||+
T Consensus        75 ~~--------------~~lv~e~~~-~~L~~~~~~---~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nili  136 (299)
T 2r3i_A           75 NK--------------LYLVFEFLH-QDLKKFMDA---SALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI  136 (299)
T ss_dssp             TE--------------EEEEEECCS-EEHHHHHHH---TTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE
T ss_pred             Cc--------------eEEEEEccc-CCHHHHHHh---hhccCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHeEE
Confidence            53              599999998 599999986   223468999999999999999999999999999999999999


Q ss_pred             ecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHHHHHHH
Q 003185          661 DLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLE  740 (840)
Q Consensus       661 d~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLGvIL~E  740 (840)
                      +.+       +.+||+|||++.........          .....||+.|+|||++.+   ...++.++|||||||++|+
T Consensus       137 ~~~-------~~~kl~dfg~~~~~~~~~~~----------~~~~~~~~~y~aPE~~~~---~~~~~~~~Di~slG~~l~~  196 (299)
T 2r3i_A          137 NTE-------GAIKLADFGLARAFGVPVRT----------YTHEVVTLWYRAPEILLG---AKYYSTAVDIWSLGCIFAE  196 (299)
T ss_dssp             CTT-------SCEEECSTTHHHHHCCCSBC----------TTSCBCCCTTCCHHHHTT---CSSCCTHHHHHHHHHHHHH
T ss_pred             cCC-------CCEEECcchhhhhccCCccc----------cCcccccccccCcHHhhc---cccCChHHHHHHHHHHHHH
Confidence            877       45999999999765432111          123468999999999975   2347899999999999999


Q ss_pred             HHhCCCCCCCCCHHHHHHHHHcCCCCCcchHHhhhccCccccccccCCCC---CCchhhhhhHHHHHHHHHHhcccCCCC
Q 003185          741 LLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGF---EKPEAELETLSFLVDVFRRCTEENPTE  817 (840)
Q Consensus       741 LLTG~~PF~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~---~~~~~~~~~s~~L~dLI~rCL~~DP~e  817 (840)
                      |++|+.||.+.+..+....+.+.........+........  +.......   .........+..+.+||.+||..||.+
T Consensus       197 l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~  274 (299)
T 2r3i_A          197 MVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD--YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNK  274 (299)
T ss_dssp             HHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTT--CCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTT
T ss_pred             HHhCCCCCCCccHHHHHHHHHHHhCCCchhhhhHhhcCcc--cchhhhcccchhhHhhCCCCCHHHHHHHHHhcCcCccc
Confidence            9999999999887776666544311111111110000000  00000000   001112234678999999999999999


Q ss_pred             CCCHHHHHHHHHhh
Q 003185          818 RPTAGDLYEMFVAR  831 (840)
Q Consensus       818 RPSa~ELLehLe~l  831 (840)
                      |||+.++++|..-.
T Consensus       275 Rpt~~~~l~hp~~~  288 (299)
T 2r3i_A          275 RISAKAALAHPFFQ  288 (299)
T ss_dssp             SCCHHHHHTSGGGT
T ss_pred             CCCHHHHhcChhhh
Confidence            99999999985543


No 156
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00  E-value=3.8e-40  Score=356.77  Aligned_cols=280  Identities=24%  Similarity=0.321  Sum_probs=205.9

Q ss_pred             CCCCCceeeeeecccCceEEEEEEE------CCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeee
Q 003185          502 GSFPSLSSCDEAGKSVSSSLFRCKF------GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYG  575 (840)
Q Consensus       502 ~~~~~y~i~~~LG~G~fG~Vy~a~~------~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~l~g  575 (840)
                      ..-++|++.+.||+|+||.||+|.+      .+..||+|++...    .....+    .+.+|+.++++++||||+++++
T Consensus        20 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~----~~~~~~----~~~~E~~~l~~l~h~~i~~~~~   91 (327)
T 3lxl_A           20 FEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHS----GPDQQR----DFQREIQILKALHSDFIVKYRG   91 (327)
T ss_dssp             CCGGGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSC----CHHHHH----HHHHHHHHHHTCCCTTBCCEEE
T ss_pred             hchhhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccC----CHHHHH----HHHHHHHHHHhcCCCceeEEEE
Confidence            4457899999999999999999985      5678999986432    223333    3489999999999999999999


Q ss_pred             EEecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCC
Q 003185          576 HKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKS  655 (840)
Q Consensus       576 ~~~~~~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKP  655 (840)
                      ++.....            ...+|||||+++++|.+++...    ...+++..++.|+.||+.||.|||++||+||||||
T Consensus        92 ~~~~~~~------------~~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp  155 (327)
T 3lxl_A           92 VSYGPGR------------QSLRLVMEYLPSGCLRDFLQRH----RARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAA  155 (327)
T ss_dssp             EEECSSS------------CEEEEEEECCTTCBHHHHHHHH----GGGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSG
T ss_pred             EEecCCC------------ceEEEEEeecCCCCHHHHHHhc----ccCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCh
Confidence            9874332            2469999999999999999762    23589999999999999999999999999999999


Q ss_pred             CcEEEecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHH
Q 003185          656 ENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYG  735 (840)
Q Consensus       656 eNILLd~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLG  735 (840)
                      +|||++.+       +.+||+|||++...........       ......||+.|+|||++.+    ..++.++||||||
T Consensus       156 ~NIl~~~~-------~~~kl~Dfg~~~~~~~~~~~~~-------~~~~~~~~~~y~aPE~~~~----~~~~~~~Di~slG  217 (327)
T 3lxl_A          156 RNILVESE-------AHVKIADFGLAKLLPLDKDYYV-------VREPGQSPIFWYAPESLSD----NIFSRQSDVWSFG  217 (327)
T ss_dssp             GGEEEEET-------TEEEECCGGGCEECCTTCSEEE-------CSSCCCSCGGGSCHHHHHH----CEEEHHHHHHHHH
T ss_pred             hhEEECCC-------CCEEEcccccceecccCCccce-------eeccCCccccccCHHHhcc----CCCChHHhHHHHH
Confidence            99999877       4699999999987643322110       1123458889999999987    5678999999999


Q ss_pred             HHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCcchHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCC
Q 003185          736 CLLLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENP  815 (840)
Q Consensus       736 vIL~ELLTG~~PF~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L~dLI~rCL~~DP  815 (840)
                      |++|+|++|..||.................+...........         ..   ........++.+.+||.+||..||
T Consensus       218 ~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~---~~~~~~~~~~~l~~li~~~l~~dP  285 (327)
T 3lxl_A          218 VVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELLEE---------GQ---RLPAPPACPAEVHELMKLCWAPSP  285 (327)
T ss_dssp             HHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHHHHHHT---------TC---CCCCCTTCCHHHHHHHHHHTCSSG
T ss_pred             HHHHHHHhCCCCCccccchhhhhcccccccccHHHHHHHhhc---------cc---CCCCCCcccHHHHHHHHHHcCCCh
Confidence            999999999999865432211110000011111110000000         00   001112346689999999999999


Q ss_pred             CCCCCHHHHHHHHHhhcCCC
Q 003185          816 TERPTAGDLYEMFVARTSSS  835 (840)
Q Consensus       816 ~eRPSa~ELLehLe~l~~~~  835 (840)
                      .+|||+.+|+++|+.+....
T Consensus       286 ~~Rps~~ell~~L~~~~~~~  305 (327)
T 3lxl_A          286 QDRPSFSALGPQLDMLWSGS  305 (327)
T ss_dssp             GGSCCHHHHHHHHHHC----
T ss_pred             hhCcCHHHHHHHHHHHHhhh
Confidence            99999999999999886543


No 157
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00  E-value=1.9e-40  Score=358.17  Aligned_cols=275  Identities=21%  Similarity=0.257  Sum_probs=205.9

Q ss_pred             CCCCceeeeeecccCceEEEEEEE-CCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeEEecCC
Q 003185          503 SFPSLSSCDEAGKSVSSSLFRCKF-GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK  581 (840)
Q Consensus       503 ~~~~y~i~~~LG~G~fG~Vy~a~~-~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~l~g~~~~~~  581 (840)
                      ..++|++.+.||+|+||.||+|.+ ++..||+|++......   ..    ...+.+|+.+++.++||||+++++++....
T Consensus        28 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~---~~----~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~  100 (326)
T 3uim_A           28 ASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQ---GG----ELQFQTEVEMISMAVHRNLLRLRGFCMTPT  100 (326)
T ss_dssp             TTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC--------C----CCHHHHHHHGGGTCCCTTBCCCCEEECCSS
T ss_pred             HhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCc---hH----HHHHHHHHHHHHhccCCCccceEEEEecCC
Confidence            457899999999999999999986 5788999986433211   11    123489999999999999999999998665


Q ss_pred             CCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecccCCCCcE
Q 003185          582 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSK---HIMHRDIKSENI  658 (840)
Q Consensus       582 ~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~---gIVHRDLKPeNI  658 (840)
                      ..              ++||||+.+|+|.+++.... .....+++..++.|+.||+.||.|||++   ||+||||||+||
T Consensus       101 ~~--------------~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Ni  165 (326)
T 3uim_A          101 ER--------------LLVYPYMANGSVASCLRERP-ESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANI  165 (326)
T ss_dssp             CC--------------EEEEECCTTCBHHHHHHCCS-TTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGE
T ss_pred             ce--------------EEEEEeccCCCHHHHHHhcc-ccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhE
Confidence            43              99999999999999997521 1234589999999999999999999999   999999999999


Q ss_pred             EEecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHHHHH
Q 003185          659 LIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLL  738 (840)
Q Consensus       659 LLd~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLGvIL  738 (840)
                      |++.+       +.+||+|||++.........         ......||+.|+|||++.+    ..++.++|||||||++
T Consensus       166 l~~~~-------~~~kl~Dfg~~~~~~~~~~~---------~~~~~~gt~~y~aPE~~~~----~~~~~~~Di~slG~il  225 (326)
T 3uim_A          166 LLDEE-------FEAVVGDFGLAKLMDYKDTH---------VTTAVRGTIGHIAPEYLST----GKSSEKTDVFGYGVML  225 (326)
T ss_dssp             EECTT-------CCEEECCCSSCEECCSSSSC---------EECCCCSCGGGCCHHHHHH----SEECHHHHHHHHHHHH
T ss_pred             EECCC-------CCEEeccCccccccCccccc---------ccccccCCcCccCHHHhcc----CCCCccccchhHHHHH
Confidence            99877       46999999999876432211         1123459999999999986    5679999999999999


Q ss_pred             HHHHhCCCCCCCC-----CHHHHHHHHHcCCCCCcchHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhccc
Q 003185          739 LELLTLQVPYMGL-----SELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEE  813 (840)
Q Consensus       739 ~ELLTG~~PF~~~-----~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L~dLI~rCL~~  813 (840)
                      |+|++|..||...     ........+........              .................+..+.+|+.+||+.
T Consensus       226 ~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~  291 (326)
T 3uim_A          226 LELITGQRAFDLARLANDDDVMLLDWVKGLLKEKK--------------LEALVDVDLQGNYKDEEVEQLIQVALLCTQS  291 (326)
T ss_dssp             HHHHHCCCSBCHHHHTTTSCSBHHHHHTTTTSSCC--------------STTSSCTTCTTSCCHHHHHHHHHHHHHHTCS
T ss_pred             HHHHhCCCcccccccccccchhHHHHHHHHhhchh--------------hhhhcChhhccccCHHHHHHHHHHHHHHhCc
Confidence            9999999999521     11111111111110000              0000000011122345678899999999999


Q ss_pred             CCCCCCCHHHHHHHHHhhcC
Q 003185          814 NPTERPTAGDLYEMFVARTS  833 (840)
Q Consensus       814 DP~eRPSa~ELLehLe~l~~  833 (840)
                      ||.+|||+.+|+++|+....
T Consensus       292 dP~~Rps~~ell~~L~~~~~  311 (326)
T 3uim_A          292 SPMERPKMSEVVRMLEGDGL  311 (326)
T ss_dssp             CGGGSCCHHHHHHHHHTSSC
T ss_pred             CCccCCCHHHHHHHhcCcch
Confidence            99999999999999987543


No 158
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00  E-value=3.5e-40  Score=348.77  Aligned_cols=263  Identities=24%  Similarity=0.331  Sum_probs=193.7

Q ss_pred             CCCCCceeeeeecccCceEEEEEEE--CCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeEEec
Q 003185          502 GSFPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKIS  579 (840)
Q Consensus       502 ~~~~~y~i~~~LG~G~fG~Vy~a~~--~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~l~g~~~~  579 (840)
                      ...++|++.+.||+|+||.||+|.+  .+..+|+|++....  . .....   ..+..+...++.++||||+++++++..
T Consensus         4 i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~-~~~~~---~~~~~~~~~~~~~~h~~iv~~~~~~~~   77 (290)
T 3fme_A            4 VKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATV--N-SQEQK---RLLMDLDISMRTVDCPFTVTFYGALFR   77 (290)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC-----C-HHHHH---HHHHHHHHHHTTCCCTTBCCEEEEEEC
T ss_pred             ccHHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeeccc--C-cHHHH---HHHHHHHHHHHhCCCCeEEEEeeeeec
Confidence            4567899999999999999999998  78899999865321  1 11111   222455556888899999999999986


Q ss_pred             CCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhC-CeecccCCCCcE
Q 003185          580 SKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSK-HIMHRDIKSENI  658 (840)
Q Consensus       580 ~~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~-gIVHRDLKPeNI  658 (840)
                      ...              .++||||++ |+|.+++...... ...+++..++.++.||+.||.|||++ ||+||||||+||
T Consensus        78 ~~~--------------~~lv~e~~~-~~l~~~l~~~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dlkp~Ni  141 (290)
T 3fme_A           78 EGD--------------VWICMELMD-TSLDKFYKQVIDK-GQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNV  141 (290)
T ss_dssp             SSS--------------EEEEEECCS-EEHHHHHHHHHHT-TCCCCHHHHHHHHHHHHHHHHHHHHHSCCCCCCCSGGGC
T ss_pred             cCC--------------EEEEEehhc-cchHHHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHE
Confidence            553              499999998 5999888754333 36799999999999999999999998 999999999999


Q ss_pred             EEecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHHHHH
Q 003185          659 LIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLL  738 (840)
Q Consensus       659 LLd~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLGvIL  738 (840)
                      |++.+       +.+||+|||++........           .....||+.|+|||++........++.++|||||||++
T Consensus       142 l~~~~-------~~~kl~Dfg~~~~~~~~~~-----------~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il  203 (290)
T 3fme_A          142 LINAL-------GQVKMCDFGISGYLVDDVA-----------KDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITM  203 (290)
T ss_dssp             EECTT-------CCEEBCCC--------------------------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHH
T ss_pred             EECCC-------CCEEEeecCCccccccccc-----------ccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHH
Confidence            99876       4699999999976644221           12236899999999985322346789999999999999


Q ss_pred             HHHHhCCCCCCCC-CHHHHHHHHHcCCCCCcchHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCC
Q 003185          739 LELLTLQVPYMGL-SELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTE  817 (840)
Q Consensus       739 ~ELLTG~~PF~~~-~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L~dLI~rCL~~DP~e  817 (840)
                      |+|++|..||... ........+.....+..+.                          ...+..+.+||.+||+.||.+
T Consensus       204 ~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~~~li~~~l~~~p~~  257 (290)
T 3fme_A          204 IELAILRFPYDSWGTPFQQLKQVVEEPSPQLPA--------------------------DKFSAEFVDFTSQCLKKNSKE  257 (290)
T ss_dssp             HHHHHTSCSSCCCSCHHHHHHHHHHSCCCCCCT--------------------------TTSCHHHHHHHHHHTCSSGGG
T ss_pred             HHHHHCCCCccccCchHHHHHHHhccCCCCccc--------------------------ccCCHHHHHHHHHHhhcChhh
Confidence            9999999999763 3444444443332222211                          112457899999999999999


Q ss_pred             CCCHHHHHHHHHh
Q 003185          818 RPTAGDLYEMFVA  830 (840)
Q Consensus       818 RPSa~ELLehLe~  830 (840)
                      |||+.++++|..-
T Consensus       258 Rpt~~e~l~hp~f  270 (290)
T 3fme_A          258 RPTYPELMQHPFF  270 (290)
T ss_dssp             SCCHHHHTTSHHH
T ss_pred             CcCHHHHHhCccc
Confidence            9999999998654


No 159
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00  E-value=1.2e-40  Score=379.12  Aligned_cols=267  Identities=23%  Similarity=0.268  Sum_probs=211.7

Q ss_pred             CCCCCceeeeeecccCceEEEEEEE--CCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeEEec
Q 003185          502 GSFPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKIS  579 (840)
Q Consensus       502 ~~~~~y~i~~~LG~G~fG~Vy~a~~--~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~l~g~~~~  579 (840)
                      ...++|++.+.||+|+||.||+|++  .+..+|+|++.....     ........+.+|+.++..++||||+++++++..
T Consensus        71 ~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~-----~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~  145 (437)
T 4aw2_A           71 LHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEM-----LKRAETACFREERDVLVNGDSKWITTLHYAFQD  145 (437)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHH-----HHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEEC
T ss_pred             CChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHh-----hhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEee
Confidence            3457899999999999999999998  467899998753210     111111235889999999999999999999987


Q ss_pred             CCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCCCcEE
Q 003185          580 SKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENIL  659 (840)
Q Consensus       580 ~~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKPeNIL  659 (840)
                      ...              .||||||++||+|.+++..    ....+++..++.++.||+.||.|||++|||||||||+|||
T Consensus       146 ~~~--------------~~lV~Ey~~gg~L~~~l~~----~~~~l~e~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NIL  207 (437)
T 4aw2_A          146 DNN--------------LYLVMDYYVGGDLLTLLSK----FEDRLPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNIL  207 (437)
T ss_dssp             SSE--------------EEEEECCCTTCBHHHHHHT----TTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEE
T ss_pred             CCE--------------EEEEEecCCCCcHHHHHHH----ccCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHee
Confidence            653              5999999999999999975    2356999999999999999999999999999999999999


Q ss_pred             EecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhccc-CCCCCCchhhHHHHHHHH
Q 003185          660 IDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMH-KPNLYGLEVDIWSYGCLL  738 (840)
Q Consensus       660 Ld~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~-~~~~~s~kSDVWSLGvIL  738 (840)
                      |+.+       +.+||+|||+|+........         .....+||+.|||||++.... ....++.++|||||||+|
T Consensus       208 l~~~-------g~vkL~DFGla~~~~~~~~~---------~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil  271 (437)
T 4aw2_A          208 MDMN-------GHIRLADFGSCLKLMEDGTV---------QSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCM  271 (437)
T ss_dssp             ECTT-------SCEEECCCTTCEECCTTSCE---------ECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHH
T ss_pred             EcCC-------CCEEEcchhhhhhcccCCCc---------ccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHH
Confidence            9877       46999999999765432211         123357999999999997321 124678999999999999


Q ss_pred             HHHHhCCCCCCCCCHHHHHHHHHcCC-CCCcchHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCC
Q 003185          739 LELLTLQVPYMGLSELEIHDLIQMGK-RPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTE  817 (840)
Q Consensus       739 ~ELLTG~~PF~~~~~~el~~~I~~~~-~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L~dLI~rCL~~DP~e  817 (840)
                      |||++|+.||.+.+..+....|.... ...++.                        .....++.+.+||.+||..+|.+
T Consensus       272 ~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~------------------------~~~~~s~~~~dLi~~lL~~~~~r  327 (437)
T 4aw2_A          272 YEMLYGETPFYAESLVETYGKIMNHKERFQFPT------------------------QVTDVSENAKDLIRRLICSREHR  327 (437)
T ss_dssp             HHHHHSSCTTCCSSHHHHHHHHHTHHHHCCCCS------------------------SCCCSCHHHHHHHHTTSSCGGGC
T ss_pred             HHHHhCCCCCCCCChhHHHHhhhhccccccCCc------------------------ccccCCHHHHHHHHHHhcccccc
Confidence            99999999999998888887775431 111111                        00123567999999999998888


Q ss_pred             --CCCHHHHHHHHHhh
Q 003185          818 --RPTAGDLYEMFVAR  831 (840)
Q Consensus       818 --RPSa~ELLehLe~l  831 (840)
                        ||+++||++|.+-.
T Consensus       328 ~~r~~~~eil~Hpff~  343 (437)
T 4aw2_A          328 LGQNGIEDFKKHPFFS  343 (437)
T ss_dssp             TTTTTTHHHHTSGGGT
T ss_pred             cCCCCHHHHhCCCccC
Confidence              99999999996543


No 160
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00  E-value=6.9e-40  Score=357.13  Aligned_cols=260  Identities=22%  Similarity=0.286  Sum_probs=212.0

Q ss_pred             CCCCCCCceeeeeecccCceEEEEEEE--CCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeEE
Q 003185          500 DPGSFPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHK  577 (840)
Q Consensus       500 ~p~~~~~y~i~~~LG~G~fG~Vy~a~~--~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~l~g~~  577 (840)
                      ++....+|.+.+.||+|+||.||+|.+  .+..+|+|++..... ......+    .+.+|+.+++.++||||+++++++
T Consensus        36 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~-~~~~~~~----~~~~E~~~l~~l~h~~iv~~~~~~  110 (335)
T 2owb_A           36 DPRSRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLL-LKPHQRE----KMSMEISIHRSLAHQHVVGFHGFF  110 (335)
T ss_dssp             ETTTTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGC-CSHHHHH----HHHHHHHHHHTCCCTTBCCEEEEE
T ss_pred             CcccCCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhh-cCHHHHH----HHHHHHHHHHhCCCCCCCeEEEEE
Confidence            345677899999999999999999998  467899998764432 2222333    348999999999999999999999


Q ss_pred             ecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCCCc
Q 003185          578 ISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSEN  657 (840)
Q Consensus       578 ~~~~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKPeN  657 (840)
                      ....              ..|+||||+.+++|.+++..     ...+++..++.++.||+.||.|||++||+||||||+|
T Consensus       111 ~~~~--------------~~~lv~e~~~~~~L~~~~~~-----~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~N  171 (335)
T 2owb_A          111 EDND--------------FVFVVLELCRRRSLLELHKR-----RKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGN  171 (335)
T ss_dssp             ECSS--------------EEEEEECCCTTCBHHHHHHH-----HCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGG
T ss_pred             ecCC--------------eEEEEEecCCCCCHHHHHhc-----cCCCCHHHHHHHHHHHHHHHHHHHHCCCEecCCCchh
Confidence            8655              35999999999999999876     2568999999999999999999999999999999999


Q ss_pred             EEEecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHHHH
Q 003185          658 ILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCL  737 (840)
Q Consensus       658 ILLd~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLGvI  737 (840)
                      ||++.+       +.+||+|||++.........          .....||+.|+|||++.+    ..++.++|||||||+
T Consensus       172 Il~~~~-------~~~kl~Dfg~~~~~~~~~~~----------~~~~~gt~~y~aPE~~~~----~~~~~~~Di~slG~i  230 (335)
T 2owb_A          172 LFLNED-------LEVKIGDFGLATKVEYDGER----------KKVLCGTPNYIAPEVLSK----KGHSFEVDVWSIGCI  230 (335)
T ss_dssp             EEECTT-------CCEEECCCTTCEECCSTTCC----------BCCCCSCCSSCCHHHHHT----SCBCTHHHHHHHHHH
T ss_pred             EEEcCC-------CCEEEeeccCceecccCccc----------ccccCCCccccCHHHhcc----CCCCchhhHHHHHHH
Confidence            999877       45999999999865432111          123469999999999986    567899999999999


Q ss_pred             HHHHHhCCCCCCCCCHHHHHHHHHcCCCCCcchHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCC
Q 003185          738 LLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTE  817 (840)
Q Consensus       738 L~ELLTG~~PF~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L~dLI~rCL~~DP~e  817 (840)
                      +|+|++|+.||......+....+..... .++.                           ..+..+.+||.+||+.||.+
T Consensus       231 l~~l~~g~~pf~~~~~~~~~~~~~~~~~-~~~~---------------------------~~~~~~~~li~~~l~~dp~~  282 (335)
T 2owb_A          231 MYTLLVGKPPFETSCLKETYLRIKKNEY-SIPK---------------------------HINPVAASLIQKMLQTDPTA  282 (335)
T ss_dssp             HHHHHHSSCTTCCSSHHHHHHHHHHTCC-CCCT---------------------------TSCHHHHHHHHHHTCSSGGG
T ss_pred             HHHHHHCcCCCCCCCHHHHHHHHhcCCC-CCCc---------------------------cCCHHHHHHHHHHccCChhH
Confidence            9999999999998877776666655422 1111                           12457899999999999999


Q ss_pred             CCCHHHHHHHHHhhc
Q 003185          818 RPTAGDLYEMFVART  832 (840)
Q Consensus       818 RPSa~ELLehLe~l~  832 (840)
                      |||+.++++|..-..
T Consensus       283 Rps~~ell~~~~~~~  297 (335)
T 2owb_A          283 RPTINELLNDEFFTS  297 (335)
T ss_dssp             SCCGGGGGGSHHHHT
T ss_pred             CcCHHHHhcCccccC
Confidence            999999999866443


No 161
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00  E-value=3.6e-40  Score=379.12  Aligned_cols=256  Identities=23%  Similarity=0.284  Sum_probs=211.1

Q ss_pred             CCCCCceeeeeecccCceEEEEEEE--CCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeEEec
Q 003185          502 GSFPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKIS  579 (840)
Q Consensus       502 ~~~~~y~i~~~LG~G~fG~Vy~a~~--~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~l~g~~~~  579 (840)
                      ..+++|.+.+.||+|+||.||+|.+  .+..||+|++.....     ........+.+|+.+|+.++||||+++++++..
T Consensus        13 ~~~~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~-----~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~   87 (476)
T 2y94_A           13 VKIGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKI-----RSLDVVGKIRREIQNLKLFRHPHIIKLYQVIST   87 (476)
T ss_dssp             CEETTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHH-----HHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEEC
T ss_pred             ceecCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhc-----cCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEE
Confidence            5678999999999999999999997  578999999753211     111223456899999999999999999999986


Q ss_pred             CCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCCCcEE
Q 003185          580 SKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENIL  659 (840)
Q Consensus       580 ~~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKPeNIL  659 (840)
                      ..              ..||||||++||+|.+++..     ...+++..++.++.||+.||.|||++||+||||||+|||
T Consensus        88 ~~--------------~~~lv~E~~~gg~L~~~l~~-----~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDLkp~NIl  148 (476)
T 2y94_A           88 PS--------------DIFMVMEYVSGGELFDYICK-----NGRLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVL  148 (476)
T ss_dssp             SS--------------EEEEEEECCSSEEHHHHTTS-----SSSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEE
T ss_pred             CC--------------EEEEEEeCCCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCCCCcccccHHHEE
Confidence            55              35999999999999999864     357999999999999999999999999999999999999


Q ss_pred             EecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHHHHHH
Q 003185          660 IDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLL  739 (840)
Q Consensus       660 Ld~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLGvIL~  739 (840)
                      ++.+       +.+||+|||++........           .....||+.|+|||++.+   ....+.++|||||||++|
T Consensus       149 l~~~-------~~vkL~DFG~a~~~~~~~~-----------~~~~~gt~~y~aPE~~~~---~~~~~~~~DiwSlGvil~  207 (476)
T 2y94_A          149 LDAH-------MNAKIADFGLSNMMSDGEF-----------LRTSCGSPNYAAPEVISG---RLYAGPEVDIWSSGVILY  207 (476)
T ss_dssp             ECTT-------CCEEECCCSSCEECCTTCC-----------BCCCCSCSTTCCHHHHTT---CCBCSHHHHHHHHHHHHH
T ss_pred             EecC-------CCeEEEeccchhhcccccc-----------ccccCCCcCeEChhhccC---CCCCCCcceehhhHHHHH
Confidence            9877       4599999999986543211           123469999999999986   223478999999999999


Q ss_pred             HHHhCCCCCCCCCHHHHHHHHHcCCCCCcchHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC
Q 003185          740 ELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP  819 (840)
Q Consensus       740 ELLTG~~PF~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L~dLI~rCL~~DP~eRP  819 (840)
                      +|++|..||.+.+...+...+..+... .+.                           ..++.+.+||.+||..||.+||
T Consensus       208 elltG~~Pf~~~~~~~~~~~i~~~~~~-~p~---------------------------~~s~~~~~Li~~~L~~dP~~Rp  259 (476)
T 2y94_A          208 ALLCGTLPFDDDHVPTLFKKICDGIFY-TPQ---------------------------YLNPSVISLLKHMLQVDPMKRA  259 (476)
T ss_dssp             HHHHSSCSSCCSSSHHHHHHHHTTCCC-CCT---------------------------TCCHHHHHHHHHHTCSSTTTSC
T ss_pred             HHhhCCCCCCCCCHHHHHHHHhcCCcC-CCc---------------------------cCCHHHHHHHHHHcCCCchhCc
Confidence            999999999988877777777665321 111                           1245789999999999999999


Q ss_pred             CHHHHHHHHHh
Q 003185          820 TAGDLYEMFVA  830 (840)
Q Consensus       820 Sa~ELLehLe~  830 (840)
                      |+.+|++|..-
T Consensus       260 t~~eil~hp~~  270 (476)
T 2y94_A          260 TIKDIREHEWF  270 (476)
T ss_dssp             CHHHHHTCHHH
T ss_pred             CHHHHHhCHHh
Confidence            99999998654


No 162
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00  E-value=1.1e-39  Score=359.65  Aligned_cols=286  Identities=18%  Similarity=0.212  Sum_probs=212.0

Q ss_pred             CCceeeeeecccCceEEEEEEE--CCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeEEecCCC
Q 003185          505 PSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW  582 (840)
Q Consensus       505 ~~y~i~~~LG~G~fG~Vy~a~~--~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~l~g~~~~~~~  582 (840)
                      ++|++.+.||+|+||.||+|.+  ++..||+|++...   .....    ...+.+|+.+|++++||||+++++++.....
T Consensus        27 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~----~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~   99 (364)
T 3qyz_A           27 PRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPF---EHQTY----CQRTLREIKILLRFRHENIIGINDIIRAPTI   99 (364)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCT---TCHHH----HHHHHHHHHHHHHCCCTTBCCCCEEECCSST
T ss_pred             ccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccc---cCcHH----HHHHHHHHHHHHhcCCCCCccceeEEecCCc
Confidence            5899999999999999999987  5778999986421   12222    2345899999999999999999999875432


Q ss_pred             CCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCCCcEEEec
Q 003185          583 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL  662 (840)
Q Consensus       583 ~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKPeNILLd~  662 (840)
                      .         .....|+||||+. ++|.+++..      ..+++..++.++.||+.||.|||++||+||||||+||||+.
T Consensus       100 ~---------~~~~~~iv~e~~~-~~L~~~l~~------~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~  163 (364)
T 3qyz_A          100 E---------QMKDVYIVQDLME-TDLYKLLKT------QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT  163 (364)
T ss_dssp             T---------TCCCEEEEEECCS-EEHHHHHHH------CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECT
T ss_pred             c---------ccceEEEEEcccC-cCHHHHHHh------CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChHhEEECC
Confidence            1         2234699999997 599999976      46999999999999999999999999999999999999987


Q ss_pred             ccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHHHHHHHHH
Q 003185          663 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL  742 (840)
Q Consensus       663 ~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLGvIL~ELL  742 (840)
                      +       +.+||+|||++..........       .......||+.|+|||++.+   ...++.++|||||||++|+|+
T Consensus       164 ~-------~~~kl~Dfg~a~~~~~~~~~~-------~~~~~~~gt~~y~aPE~~~~---~~~~~~~~DiwslG~il~ell  226 (364)
T 3qyz_A          164 T-------CDLKICDFGLARVADPDHDHT-------GFLTEYVATRWYRAPEIMLN---SKGYTKSIDIWSVGCILAEML  226 (364)
T ss_dssp             T-------CCEEECCCTTCEECCGGGCBC-------CTTCCCCSCGGGCCHHHHHT---BCSCSTHHHHHHHHHHHHHHH
T ss_pred             C-------CCEEEEeCcceEecCCCCCcc-------ccccccccccCCCCCHHhcC---CCCCCcchhHHHHHHHHHHHH
Confidence            7       459999999998765432211       11233579999999999764   245789999999999999999


Q ss_pred             hCCCCCCCCCHHHHHHHHHcCCCCCcchHHhhhccCcccccccc---CCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC
Q 003185          743 TLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQS---GSGFEKPEAELETLSFLVDVFRRCTEENPTERP  819 (840)
Q Consensus       743 TG~~PF~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~---~~~~~~~~~~~~~s~~L~dLI~rCL~~DP~eRP  819 (840)
                      +|+.||.+.+..+....+.........+.+..........+...   .............+..+.+||.+||..||.+||
T Consensus       227 ~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~  306 (364)
T 3qyz_A          227 SNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRI  306 (364)
T ss_dssp             HSSCSSCCSSGGGHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSC
T ss_pred             HCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCC
Confidence            99999998887777766654322222222211100000000000   000001111233467899999999999999999


Q ss_pred             CHHHHHHHHHh
Q 003185          820 TAGDLYEMFVA  830 (840)
Q Consensus       820 Sa~ELLehLe~  830 (840)
                      |+.|+++|..-
T Consensus       307 t~~e~l~hp~~  317 (364)
T 3qyz_A          307 EVEQALAHPYL  317 (364)
T ss_dssp             CHHHHHTSGGG
T ss_pred             CHHHHhcCcch
Confidence            99999998654


No 163
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00  E-value=1.9e-40  Score=358.40  Aligned_cols=264  Identities=21%  Similarity=0.291  Sum_probs=201.3

Q ss_pred             CCceeeeeecccCceEEEEEEE--CCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeEEecCCC
Q 003185          505 PSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW  582 (840)
Q Consensus       505 ~~y~i~~~LG~G~fG~Vy~a~~--~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~l~g~~~~~~~  582 (840)
                      ++|.+.+.||+|+||.||+|.+  .+..||+|++..................+.+|+.+|++++||||+++++++.... 
T Consensus        10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-   88 (322)
T 2ycf_A           10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED-   88 (322)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSS-
T ss_pred             hceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCc-
Confidence            5799999999999999999998  5678999997543221111111111234589999999999999999999986432 


Q ss_pred             CCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCCCcEEEec
Q 003185          583 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL  662 (840)
Q Consensus       583 ~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKPeNILLd~  662 (840)
                                    .|+||||+++++|.+++..     ...+++..++.++.||+.||.|||++||+||||||+|||++.
T Consensus        89 --------------~~lv~e~~~~~~L~~~~~~-----~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~  149 (322)
T 2ycf_A           89 --------------YYIVLELMEGGELFDKVVG-----NKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSS  149 (322)
T ss_dssp             --------------EEEEEECCTTEETHHHHST-----TCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESS
T ss_pred             --------------eEEEEecCCCCcHHHHHhc-----cCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEec
Confidence                          4999999999999998864     357999999999999999999999999999999999999986


Q ss_pred             ccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHHHHHHHHH
Q 003185          663 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL  742 (840)
Q Consensus       663 ~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLGvIL~ELL  742 (840)
                      ++.    ...+||+|||++.........           ....||+.|+|||++.... ...++.++|||||||++|+|+
T Consensus       150 ~~~----~~~~kl~Dfg~~~~~~~~~~~-----------~~~~gt~~y~aPE~~~~~~-~~~~~~~~Di~slG~il~~l~  213 (322)
T 2ycf_A          150 QEE----DCLIKITDFGHSKILGETSLM-----------RTLCGTPTYLAPEVLVSVG-TAGYNRAVDCWSLGVILFICL  213 (322)
T ss_dssp             SSS----SCCEEECCCTTCEECCCCHHH-----------HHHHSCCTTCCHHHHHHTT-TTTCTTHHHHHHHHHHHHHHH
T ss_pred             CCC----CCeEEEccCccceeccccccc-----------ccccCCcCccCchhhccCC-CCCCCchhhHHHHHHHHHHHH
Confidence            631    356999999999876432211           1235899999999985321 256789999999999999999


Q ss_pred             hCCCCCCCCCH-HHHHHHHHcCCCCCcchHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH
Q 003185          743 TLQVPYMGLSE-LEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA  821 (840)
Q Consensus       743 TG~~PF~~~~~-~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L~dLI~rCL~~DP~eRPSa  821 (840)
                      +|..||..... ..+...+..+.....+..                        ....+..+.+||.+||..||.+|||+
T Consensus       214 ~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~li~~~l~~dP~~Rps~  269 (322)
T 2ycf_A          214 SGYPPFSEHRTQVSLKDQITSGKYNFIPEV------------------------WAEVSEKALDLVKKLLVVDPKARFTT  269 (322)
T ss_dssp             HSSCSSCSTTCSSCHHHHHHHTCCCCCHHH------------------------HTTSCHHHHHHHHHHSCSSTTTSCCH
T ss_pred             hCCCCCcccchHHHHHHHHHhCccccCchh------------------------hhhcCHHHHHHHHHHcccCHhhCCCH
Confidence            99999976543 234444444433322221                        12235679999999999999999999


Q ss_pred             HHHHHHH
Q 003185          822 GDLYEMF  828 (840)
Q Consensus       822 ~ELLehL  828 (840)
                      .++++|.
T Consensus       270 ~~~l~h~  276 (322)
T 2ycf_A          270 EEALRHP  276 (322)
T ss_dssp             HHHHTSG
T ss_pred             HHHhhCc
Confidence            9999873


No 164
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00  E-value=3.2e-40  Score=367.78  Aligned_cols=254  Identities=24%  Similarity=0.292  Sum_probs=201.3

Q ss_pred             CCCCCceeeeeecccCceEEEEEEE--CCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHH-HHhCCCCCcceeeeEEe
Q 003185          502 GSFPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRM-LGALRHSCIVEMYGHKI  578 (840)
Q Consensus       502 ~~~~~y~i~~~LG~G~fG~Vy~a~~--~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~i-L~~L~HpNIV~l~g~~~  578 (840)
                      ...++|++.+.||+|+||.||+|++  .+..+|+|+......... ....    .+.+|..+ ++.++|||||++++++.
T Consensus        35 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~-~~~~----~~~~e~~~ll~~~~hp~Iv~l~~~~~  109 (373)
T 2r5t_A           35 AKPSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKK-KEEK----HIMSERNVLLKNVKHPFLVGLHFSFQ  109 (373)
T ss_dssp             CCGGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC------------------CCBCCCCCTTBCCEEEEEE
T ss_pred             CChhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhh-HHHH----HHHHHHHHHHHhCCCCCCCCEEEEEE
Confidence            5678999999999999999999998  467899999765432221 1222    23667776 57789999999999998


Q ss_pred             cCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCCCcE
Q 003185          579 SSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENI  658 (840)
Q Consensus       579 ~~~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKPeNI  658 (840)
                      ....              .||||||++||+|..++..     ...+++..++.++.||+.||.|||++||+||||||+||
T Consensus       110 ~~~~--------------~~lv~E~~~gg~L~~~l~~-----~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NI  170 (373)
T 2r5t_A          110 TADK--------------LYFVLDYINGGELFYHLQR-----ERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENI  170 (373)
T ss_dssp             CSSE--------------EEEEEECCCSCBHHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGE
T ss_pred             eCCE--------------EEEEEeCCCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHE
Confidence            6653              5999999999999999986     25689999999999999999999999999999999999


Q ss_pred             EEecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHHHHH
Q 003185          659 LIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLL  738 (840)
Q Consensus       659 LLd~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLGvIL  738 (840)
                      ||+.+       +.+||+|||+++.......          ......||+.|+|||++.+    ..++.++|||||||++
T Consensus       171 ll~~~-------g~ikL~DFG~a~~~~~~~~----------~~~~~~gt~~y~aPE~~~~----~~~~~~~DiwslG~il  229 (373)
T 2r5t_A          171 LLDSQ-------GHIVLTDFGLCKENIEHNS----------TTSTFCGTPEYLAPEVLHK----QPYDRTVDWWCLGAVL  229 (373)
T ss_dssp             EECTT-------SCEEECCCCBCGGGBCCCC----------CCCSBSCCCCCCCHHHHTT----CCCCTHHHHHHHHHHH
T ss_pred             EECCC-------CCEEEeeCccccccccCCC----------ccccccCCccccCHHHhCC----CCCCchhhhHHHHHHH
Confidence            99877       4699999999975432111          1234579999999999986    6789999999999999


Q ss_pred             HHHHhCCCCCCCCCHHHHHHHHHcCCCCCcchHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCC
Q 003185          739 LELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTER  818 (840)
Q Consensus       739 ~ELLTG~~PF~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L~dLI~rCL~~DP~eR  818 (840)
                      |||++|..||.+.+..++...+...... ++.                           ..+..+.+||.+||+.||.+|
T Consensus       230 ~ell~G~~Pf~~~~~~~~~~~i~~~~~~-~~~---------------------------~~~~~~~~li~~lL~~dp~~R  281 (373)
T 2r5t_A          230 YEMLYGLPPFYSRNTAEMYDNILNKPLQ-LKP---------------------------NITNSARHLLEGLLQKDRTKR  281 (373)
T ss_dssp             HHHHHSSCTTCCSBHHHHHHHHHHSCCC-CCS---------------------------SSCHHHHHHHHHHTCSSGGGS
T ss_pred             HHHHcCCCCCCCCCHHHHHHHHHhcccC-CCC---------------------------CCCHHHHHHHHHHcccCHHhC
Confidence            9999999999999888888887765321 111                           124578999999999999999


Q ss_pred             CCH----HHHHHHH
Q 003185          819 PTA----GDLYEMF  828 (840)
Q Consensus       819 PSa----~ELLehL  828 (840)
                      |++    .+|++|.
T Consensus       282 ~~~~~~~~~i~~h~  295 (373)
T 2r5t_A          282 LGAKDDFMEIKSHV  295 (373)
T ss_dssp             TTTTTTHHHHHTSG
T ss_pred             CCCCCCHHHHhCCc
Confidence            987    5777764


No 165
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00  E-value=7.6e-40  Score=349.20  Aligned_cols=265  Identities=22%  Similarity=0.269  Sum_probs=206.9

Q ss_pred             CCCCceeeeeecccCceEEEEEEE--CCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeEEecC
Q 003185          503 SFPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISS  580 (840)
Q Consensus       503 ~~~~y~i~~~LG~G~fG~Vy~a~~--~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~l~g~~~~~  580 (840)
                      -+++|.+.+.||+|+||.||+|.+  .+..+|+|++........    ......+.+|+.++++++||||+++++++...
T Consensus         3 l~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~----~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~   78 (305)
T 2wtk_C            3 LIGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRI----PNGEANVKKEIQLLRRLRHKNVIQLVDVLYNE   78 (305)
T ss_dssp             --CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHS----TTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC
T ss_pred             cccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEecccccccc----chhHHHHHHHHHHHHhcCCCCeeEEEEEEEcC
Confidence            357899999999999999999997  567899999754321111    11223458999999999999999999998643


Q ss_pred             CCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCCCcEEE
Q 003185          581 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILI  660 (840)
Q Consensus       581 ~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKPeNILL  660 (840)
                      ..            ...+|||||+.++ |.+++..   .....+++..++.++.||+.||.|||++||+||||||+|||+
T Consensus        79 ~~------------~~~~lv~e~~~~~-l~~~~~~---~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~NIl~  142 (305)
T 2wtk_C           79 EK------------QKMYMVMEYCVCG-MQEMLDS---VPEKRFPVCQAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLL  142 (305)
T ss_dssp             ---------------CEEEEEECCSEE-HHHHHHH---STTCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE
T ss_pred             CC------------CeEEEEehhccCC-HHHHHHh---CcccccCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEE
Confidence            21            2469999999865 8888775   234579999999999999999999999999999999999999


Q ss_pred             ecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHHHHHHH
Q 003185          661 DLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLE  740 (840)
Q Consensus       661 d~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLGvIL~E  740 (840)
                      +.+       +.+||+|||++..........        ......||+.|+|||++.+.  ...++.++|||||||++|+
T Consensus       143 ~~~-------~~~kl~dfg~~~~~~~~~~~~--------~~~~~~~~~~y~aPE~~~~~--~~~~~~~~Di~slG~il~~  205 (305)
T 2wtk_C          143 TTG-------GTLKISALGVAEALHPFAADD--------TCRTSQGSPAFQPPEIANGL--DTFSGFKVDIWSAGVTLYN  205 (305)
T ss_dssp             CTT-------CCEEECCCTTCEECCTTCSSC--------EECCCCSCGGGCCHHHHTCC--SCEESHHHHHHHHHHHHHH
T ss_pred             cCC-------CcEEeeccccccccCcccccc--------ccccCCCCCCCcChhhccCc--ccCCcchhhHHHHHHHHHH
Confidence            877       459999999998664321110        01234589999999999751  1234789999999999999


Q ss_pred             HHhCCCCCCCCCHHHHHHHHHcCCCCCcchHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCC
Q 003185          741 LLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPT  820 (840)
Q Consensus       741 LLTG~~PF~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L~dLI~rCL~~DP~eRPS  820 (840)
                      |++|..||.+.+..+....+.....+ ++                           ...+..+.+||.+||..||.+|||
T Consensus       206 l~~g~~p~~~~~~~~~~~~i~~~~~~-~~---------------------------~~~~~~l~~li~~~l~~dp~~Rps  257 (305)
T 2wtk_C          206 ITTGLYPFEGDNIYKLFENIGKGSYA-IP---------------------------GDCGPPLSDLLKGMLEYEPAKRFS  257 (305)
T ss_dssp             HHHSSCSCCCSSHHHHHHHHHHCCCC-CC---------------------------SSSCHHHHHHHHHHTCSSTTTSCC
T ss_pred             HHhCCCCCCCchHHHHHHHHhcCCCC-CC---------------------------CccCHHHHHHHHHHccCChhhCCC
Confidence            99999999998888877777665321 11                           012457899999999999999999


Q ss_pred             HHHHHHHHHhhc
Q 003185          821 AGDLYEMFVART  832 (840)
Q Consensus       821 a~ELLehLe~l~  832 (840)
                      +.++++|..-..
T Consensus       258 ~~~ll~~~~~~~  269 (305)
T 2wtk_C          258 IRQIRQHSWFRK  269 (305)
T ss_dssp             HHHHHHSHHHHS
T ss_pred             HHHHhcCccccc
Confidence            999999966543


No 166
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=3.5e-40  Score=367.00  Aligned_cols=264  Identities=23%  Similarity=0.346  Sum_probs=198.4

Q ss_pred             CCceeeeeecccCceEEEEEEE---CCe--eEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeEEec
Q 003185          505 PSLSSCDEAGKSVSSSLFRCKF---GSA--DAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKIS  579 (840)
Q Consensus       505 ~~y~i~~~LG~G~fG~Vy~a~~---~~~--~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~l~g~~~~  579 (840)
                      ..|.+.+.||+|+||.||+|.+   ++.  .+|+|+  ++.. ......+.    +.+|+.+|++++||||+++++++..
T Consensus        89 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~--~~~~-~~~~~~~~----~~~E~~il~~l~hpnIv~~~~~~~~  161 (373)
T 3c1x_A           89 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKS--LNRI-TDIGEVSQ----FLTEGIIMKDFSHPNVLSLLGICLR  161 (373)
T ss_dssp             EEEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEE--CCSC-SCSHHHHH----HHHHHTTSTTCCCTTBCCCCEEECC
T ss_pred             ceeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEE--cCCC-CCHHHHHH----HHHHHHHHHhCCCCCcceEEEEEEc
Confidence            4588999999999999999986   223  456665  3322 22233334    4899999999999999999998764


Q ss_pred             CCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCCCcEE
Q 003185          580 SKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENIL  659 (840)
Q Consensus       580 ~~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKPeNIL  659 (840)
                      ...             ..++||||+++|+|.+++..    ....+++..++.++.||+.||.|||++||+||||||+|||
T Consensus       162 ~~~-------------~~~lv~e~~~~g~L~~~l~~----~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIl  224 (373)
T 3c1x_A          162 SEG-------------SPLVVLPYMKHGDLRNFIRN----ETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCM  224 (373)
T ss_dssp             CSS-------------CCEEEEECCTTCBHHHHHHC----TTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEE
T ss_pred             CCC-------------CeEEEEECCCCCCHHHHHhh----cccCCCHHHHHHHHHHHHHHHHHHHHCCEecCccchheEE
Confidence            331             24999999999999999974    2356889999999999999999999999999999999999


Q ss_pred             EecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHHHHHH
Q 003185          660 IDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLL  739 (840)
Q Consensus       660 Ld~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLGvIL~  739 (840)
                      ++.+       +.+||+|||+++.+.......      ........+|+.|+|||++.+    ..++.++|||||||+||
T Consensus       225 l~~~-------~~~kL~DFG~a~~~~~~~~~~------~~~~~~~~~~~~y~aPE~~~~----~~~~~~~DvwSlG~il~  287 (373)
T 3c1x_A          225 LDEK-------FTVKVADFGLARDMYDKEFDS------VHNKTGAKLPVKWMALESLQT----QKFTTKSDVWSFGVLLW  287 (373)
T ss_dssp             ECTT-------CCEEECCC---------------------------CCGGGSCHHHHHH----CCCCHHHHHHHHHHHHH
T ss_pred             ECCC-------CCEEEeecccccccccccccc------ccccCCCCCcccccChHHhcC----CCCCcHHHHHHHHHHHH
Confidence            9876       469999999998664322110      011123457889999999987    67899999999999999


Q ss_pred             HHHh-CCCCCCCCCHHHHHHHHHcCCCCCcchHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCC
Q 003185          740 ELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTER  818 (840)
Q Consensus       740 ELLT-G~~PF~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L~dLI~rCL~~DP~eR  818 (840)
                      ||+| |.+||...+..++...+..+.++..+.                           .++..+.+||.+||..||.+|
T Consensus       288 ellt~~~~p~~~~~~~~~~~~~~~~~~~~~p~---------------------------~~~~~l~~li~~cl~~dp~~R  340 (373)
T 3c1x_A          288 ELMTRGAPPYPDVNTFDITVYLLQGRRLLQPE---------------------------YCPDPLYEVMLKCWHPKAEMR  340 (373)
T ss_dssp             HHHTTSCCSCTTSCSSCHHHHHHTTCCCCCCT---------------------------TCCHHHHHHHHHHTCSSGGGS
T ss_pred             HHHhCcCCCCCCCCHHHHHHHHHcCCCCCCCC---------------------------CCCHHHHHHHHHHcCCChhhC
Confidence            9999 788888777666666666654433221                           124578999999999999999


Q ss_pred             CCHHHHHHHHHhhcCCCC
Q 003185          819 PTAGDLYEMFVARTSSSI  836 (840)
Q Consensus       819 PSa~ELLehLe~l~~~~~  836 (840)
                      ||+.+|+++|+.+.....
T Consensus       341 Ps~~ell~~L~~i~~~~~  358 (373)
T 3c1x_A          341 PSFSELVSRISAIFSTFI  358 (373)
T ss_dssp             CCHHHHHHHHHHHHHTCC
T ss_pred             cCHHHHHHHHHHHHHhcc
Confidence            999999999999876543


No 167
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00  E-value=1.8e-39  Score=347.11  Aligned_cols=301  Identities=21%  Similarity=0.232  Sum_probs=209.1

Q ss_pred             CCCceeeeeecccCceEEEEEEEC--CeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeEEecCC
Q 003185          504 FPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK  581 (840)
Q Consensus       504 ~~~y~i~~~LG~G~fG~Vy~a~~~--~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~l~g~~~~~~  581 (840)
                      -++|++.+.||+|+||.||+|.+.  +..||+|++...    .....+    .+.+|+.++++++||||+++++++....
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~~----~~~~e~~~l~~l~h~~iv~~~~~~~~~~   81 (320)
T 2i6l_A           10 GSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLT----DPQSVK----HALREIKIIRRLDHDNIVKVFEILGPSG   81 (320)
T ss_dssp             TTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECC----SHHHHH----HHHHHHHHHHTCCCTTBCCEEEEECTTS
T ss_pred             CCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecC----ChHHHH----HHHHHHHHHHhcCCCCeeEEEEeccccc
Confidence            468999999999999999999984  788999987533    223333    3489999999999999999999986443


Q ss_pred             CCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCCCcEEEe
Q 003185          582 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID  661 (840)
Q Consensus       582 ~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKPeNILLd  661 (840)
                      ................++||||+. |+|.+++..      ..+++..++.++.||+.||+|||++||+||||||+|||++
T Consensus        82 ~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~------~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~  154 (320)
T 2i6l_A           82 SQLTDDVGSLTELNSVYIVQEYME-TDLANVLEQ------GPLLEEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFIN  154 (320)
T ss_dssp             CBCCC----CCSCSEEEEEEECCS-EEHHHHHTT------CCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEE
T ss_pred             cccccccccccccCceeEEeeccC-CCHHHHhhc------CCccHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEc
Confidence            110000011122346799999998 599999863      5689999999999999999999999999999999999997


Q ss_pred             cccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHHHHHHHH
Q 003185          662 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL  741 (840)
Q Consensus       662 ~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLGvIL~EL  741 (840)
                      .++      +.+||+|||+++........       ........+|+.|+|||++.+   ...++.++|||||||++|||
T Consensus       155 ~~~------~~~kl~Dfg~~~~~~~~~~~-------~~~~~~~~~~~~y~aPE~~~~---~~~~~~~~Di~slG~il~el  218 (320)
T 2i6l_A          155 TED------LVLKIGDFGLARIMDPHYSH-------KGHLSEGLVTKWYRSPRLLLS---PNNYTKAIDMWAAGCIFAEM  218 (320)
T ss_dssp             TTT------TEEEECCCTTCBCC---------------CCCGGGSCCTTCCHHHHHC---TTCCCHHHHHHHHHHHHHHH
T ss_pred             CCC------CeEEEccCccccccCCCccc-------ccccccccccccccCcHHhcC---cccCCchhhhHhHHHHHHHH
Confidence            542      57999999999876432111       011223457999999999874   25689999999999999999


Q ss_pred             HhCCCCCCCCCHHHHHHHHHcCCCCCcchHHhhhccCccccccccC--CCCCCchhhhhhHHHHHHHHHHhcccCCCCCC
Q 003185          742 LTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSG--SGFEKPEAELETLSFLVDVFRRCTEENPTERP  819 (840)
Q Consensus       742 LTG~~PF~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~--~~~~~~~~~~~~s~~L~dLI~rCL~~DP~eRP  819 (840)
                      ++|+.||.+.+..+....+...........................  ............+..+.+||.+||+.||.+||
T Consensus       219 ~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp  298 (320)
T 2i6l_A          219 LTGKTLFAGAHELEQMQLILESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRL  298 (320)
T ss_dssp             HHSSCSSCCSSHHHHHHHHHHHSCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSC
T ss_pred             HhCCCCCCCCCHHHHHHHHHHhcCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccC
Confidence            9999999998887777666654332222222111110000000000  00000111223567899999999999999999


Q ss_pred             CHHHHHHHHHhhcCCC
Q 003185          820 TAGDLYEMFVARTSSS  835 (840)
Q Consensus       820 Sa~ELLehLe~l~~~~  835 (840)
                      |+.++++|..-..-+.
T Consensus       299 t~~ell~hp~~~~~~~  314 (320)
T 2i6l_A          299 TAEEALSHPYMSIYSF  314 (320)
T ss_dssp             CHHHHHTSHHHHTTCC
T ss_pred             CHHHHhCCcccccccC
Confidence            9999999966544333


No 168
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=1.7e-39  Score=344.86  Aligned_cols=261  Identities=22%  Similarity=0.337  Sum_probs=206.9

Q ss_pred             CceeeeeecccCceEEEEEEE--CC---eeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeEEecC
Q 003185          506 SLSSCDEAGKSVSSSLFRCKF--GS---ADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISS  580 (840)
Q Consensus       506 ~y~i~~~LG~G~fG~Vy~a~~--~~---~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~l~g~~~~~  580 (840)
                      .|.+.+.||+|+||.||+|.+  .+   ..+|+|+...   .......+.    +.+|+.++++++||||+++++++...
T Consensus        22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~---~~~~~~~~~----~~~E~~~l~~l~h~~iv~~~~~~~~~   94 (298)
T 3pls_A           22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSR---ITEMQQVEA----FLREGLLMRGLNHPNVLALIGIMLPP   94 (298)
T ss_dssp             EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETT---CCSHHHHHH----HHHHHHHHHTCCCTTBCCCCEEECCS
T ss_pred             EEccCceeccCCCceEEEEEEecCCCceeeeeeeeccc---cccHHHHHH----HHHHHHHHHhCCCCCeeeEEEEEecC
Confidence            466789999999999999986  22   2578887532   222333334    48999999999999999999998755


Q ss_pred             CCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCCCcEEE
Q 003185          581 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILI  660 (840)
Q Consensus       581 ~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKPeNILL  660 (840)
                      ...             .++||||+.+++|.+++..    ....+++..++.++.||+.||.|||++||+||||||+|||+
T Consensus        95 ~~~-------------~~~v~e~~~~~~L~~~~~~----~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nili  157 (298)
T 3pls_A           95 EGL-------------PHVLLPYMCHGDLLQFIRS----PQRNPTVKDLISFGLQVARGMEYLAEQKFVHRDLAARNCML  157 (298)
T ss_dssp             SSC-------------CEEEECCCTTCBHHHHHHC----TTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE
T ss_pred             CCC-------------cEEEEecccCCCHHHHHhc----cccCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEE
Confidence            432             3899999999999999974    34568999999999999999999999999999999999999


Q ss_pred             ecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHHHHHHH
Q 003185          661 DLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLE  740 (840)
Q Consensus       661 d~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLGvIL~E  740 (840)
                      +.+       +.+||+|||+++.........      ........+|+.|+|||.+.+    ..++.++|||||||++|+
T Consensus       158 ~~~-------~~~kl~Dfg~~~~~~~~~~~~------~~~~~~~~~~~~y~aPE~~~~----~~~~~~~Di~slG~il~~  220 (298)
T 3pls_A          158 DES-------FTVKVADFGLARDILDREYYS------VQQHRHARLPVKWTALESLQT----YRFTTKSDVWSFGVLLWE  220 (298)
T ss_dssp             CTT-------CCEEECCTTSSCTTTTGGGGC------SCCSSCTTCGGGGSCHHHHTT----CCCCHHHHHHHHHHHHHH
T ss_pred             cCC-------CcEEeCcCCCcccccCCcccc------cccCcCCCCCccccChhhhcc----CCCChhhchhhHHHHHHH
Confidence            876       469999999998664432111      111233468899999999976    678999999999999999


Q ss_pred             HHh-CCCCCCCCCHHHHHHHHHcCCCCCcchHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC
Q 003185          741 LLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP  819 (840)
Q Consensus       741 LLT-G~~PF~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L~dLI~rCL~~DP~eRP  819 (840)
                      |++ +.+||...+..++...+.....+..+.                           ..++.+.+||.+||..||.+||
T Consensus       221 l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~l~~li~~~l~~~p~~Rp  273 (298)
T 3pls_A          221 LLTRGAPPYRHIDPFDLTHFLAQGRRLPQPE---------------------------YCPDSLYQVMQQCWEADPAVRP  273 (298)
T ss_dssp             HHHTSCCTTTTSCGGGHHHHHHTTCCCCCCT---------------------------TCCHHHHHHHHHHTCSSGGGSC
T ss_pred             HhhCCCCCCccCCHHHHHHHhhcCCCCCCCc---------------------------cchHHHHHHHHHHccCChhhCc
Confidence            999 556666677777777776654433221                           1245789999999999999999


Q ss_pred             CHHHHHHHHHhhcCC
Q 003185          820 TAGDLYEMFVARTSS  834 (840)
Q Consensus       820 Sa~ELLehLe~l~~~  834 (840)
                      |+.++++.|+.+...
T Consensus       274 s~~~ll~~l~~~~~~  288 (298)
T 3pls_A          274 TFRVLVGEVEQIVSA  288 (298)
T ss_dssp             CHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHH
Confidence            999999999988654


No 169
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00  E-value=5.7e-40  Score=370.38  Aligned_cols=285  Identities=22%  Similarity=0.225  Sum_probs=208.1

Q ss_pred             CCCceeeeeecccCceEEEEEEE--CCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeEEecCC
Q 003185          504 FPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK  581 (840)
Q Consensus       504 ~~~y~i~~~LG~G~fG~Vy~a~~--~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~l~g~~~~~~  581 (840)
                      ..+|++.+.||+|+||.||+|.+  .+..||+|++....        ..+    .+|+.+|+.|+|||||++++++....
T Consensus        53 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~--------~~~----~~E~~il~~l~hpniv~l~~~~~~~~  120 (420)
T 1j1b_A           53 EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK--------RFK----NRELQIMRKLDHCNIVRLRYFFYSSG  120 (420)
T ss_dssp             EEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCT--------TSC----CHHHHHHHTCCCTTBCCEEEEEEEEE
T ss_pred             cceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccc--------hhH----HHHHHHHHHcCCCCccceeeEEeccC
Confidence            34799999999999999999998  57889999864321        111    57999999999999999999986432


Q ss_pred             CCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCCCcEEEe
Q 003185          582 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID  661 (840)
Q Consensus       582 ~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKPeNILLd  661 (840)
                      ..        .....+++||||+++ +|.+++..... ....+++..++.++.||+.||.|||++||+||||||+||||+
T Consensus       121 ~~--------~~~~~~~lv~e~~~~-~l~~~~~~~~~-~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NILl~  190 (420)
T 1j1b_A          121 EK--------KDEVYLNLVLDYVPE-TVYRVARHYSR-AKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLD  190 (420)
T ss_dssp             TT--------TTEEEEEEEEECCCE-EHHHHHHHHHH-TTCCCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEEE
T ss_pred             CC--------CcceeEEeehhcccc-cHHHHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChhhEEEe
Confidence            10        122346899999985 88887765333 346799999999999999999999999999999999999998


Q ss_pred             cccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHHHHHHHH
Q 003185          662 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL  741 (840)
Q Consensus       662 ~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLGvIL~EL  741 (840)
                      .++      ..+||+|||+++.+.....           ....+||+.|+|||++.+   ...++.++|||||||+||||
T Consensus       191 ~~~------~~~kl~DFG~a~~~~~~~~-----------~~~~~~t~~y~aPE~~~~---~~~~~~~~DiwSlG~il~el  250 (420)
T 1j1b_A          191 PDT------AVLKLCDFGSAKQLVRGEP-----------NVSYICSRYYRAPELIFG---ATDYTSSIDVWSAGCVLAEL  250 (420)
T ss_dssp             TTT------TEEEECCCTTCEECCTTCC-----------CCSCCSCTTSCCHHHHTT---CSSCCTHHHHHHHHHHHHHH
T ss_pred             CCC------CeEEeccchhhhhcccCCC-----------ceeeeeCCCcCCHHHHcC---CCCCCchhhhHHHHHHHHHH
Confidence            652      4689999999986543211           123468999999999975   24689999999999999999


Q ss_pred             HhCCCCCCCCCHHHHHHHHHcCCCCCcchHHhhhccC-ccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCC
Q 003185          742 LTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSC-HEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPT  820 (840)
Q Consensus       742 LTG~~PF~~~~~~el~~~I~~~~~p~l~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~s~~L~dLI~rCL~~DP~eRPS  820 (840)
                      ++|+.||.+.+..+.+..+.+.......+.+...... ....+.......-........+..+.+||.+||.+||.+|||
T Consensus       251 l~G~~pf~~~~~~~~l~~i~~~lg~p~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t  330 (420)
T 1j1b_A          251 LLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLT  330 (420)
T ss_dssp             HHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHHHHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCC
T ss_pred             HhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCC
Confidence            9999999998877666665543222222222221100 000000000000000001234578999999999999999999


Q ss_pred             HHHHHHHHHh
Q 003185          821 AGDLYEMFVA  830 (840)
Q Consensus       821 a~ELLehLe~  830 (840)
                      +.|+++|..-
T Consensus       331 ~~e~l~hp~f  340 (420)
T 1j1b_A          331 PLEACAHSFF  340 (420)
T ss_dssp             HHHHHTSGGG
T ss_pred             HHHHhCCHhh
Confidence            9999998543


No 170
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00  E-value=6.7e-40  Score=358.35  Aligned_cols=260  Identities=22%  Similarity=0.308  Sum_probs=197.4

Q ss_pred             CCCceeeeeecccCceEEEEEEE-CCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCC--CCcceeeeEEecC
Q 003185          504 FPSLSSCDEAGKSVSSSLFRCKF-GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRH--SCIVEMYGHKISS  580 (840)
Q Consensus       504 ~~~y~i~~~LG~G~fG~Vy~a~~-~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~H--pNIV~l~g~~~~~  580 (840)
                      -.+|++.+.||+|+||.||+|.+ .+..||+|++....  ......+.    +.+|+.+|.+++|  |||+++++++...
T Consensus         8 ~~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~----~~~E~~~l~~l~~~~~~iv~~~~~~~~~   81 (343)
T 3dbq_A            8 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEE--ADNQTLDS----YRNEIAYLNKLQQHSDKIIRLYDYEITD   81 (343)
T ss_dssp             SCEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTT--CCHHHHHH----HHHHHHHHHHHTTTCTTBCCEEEEEECS
T ss_pred             cCEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccc--cchHHHHH----HHHHHHHHHhhhhcCCceEEEeeeEeeC
Confidence            35699999999999999999987 56779999976442  23333334    4899999999986  9999999999865


Q ss_pred             CCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCCCcEEE
Q 003185          581 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILI  660 (840)
Q Consensus       581 ~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKPeNILL  660 (840)
                      ..              .+||||+ .+++|.+++..     ...+++..++.++.||+.||.|||++||+||||||+||||
T Consensus        82 ~~--------------~~lv~e~-~~~~L~~~l~~-----~~~~~~~~~~~i~~qi~~al~~lH~~~iiHrDikp~NIll  141 (343)
T 3dbq_A           82 QY--------------IYMVMEC-GNIDLNSWLKK-----KKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI  141 (343)
T ss_dssp             SE--------------EEEEECC-CSEEHHHHHHH-----SCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE
T ss_pred             CE--------------EEEEEeC-CCCCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEE
Confidence            53              5999995 56899999986     3578999999999999999999999999999999999999


Q ss_pred             ecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhccc-------CCCCCCchhhHHH
Q 003185          661 DLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMH-------KPNLYGLEVDIWS  733 (840)
Q Consensus       661 d~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~-------~~~~~s~kSDVWS  733 (840)
                      +.        +.+||+|||+++........        .......||+.|+|||++.+..       ....++.++||||
T Consensus       142 ~~--------~~~kl~DFG~a~~~~~~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Diws  205 (343)
T 3dbq_A          142 VD--------GMLKLIDFGIANQMQPDTTS--------VVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWS  205 (343)
T ss_dssp             ET--------TEEEECCCSSSCCC--------------------CCCCSSCCHHHHHHCC-----------CCHHHHHHH
T ss_pred             EC--------CcEEEeecccccccCccccc--------ccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHH
Confidence            63        36999999999876432211        0123356999999999997421       1246789999999


Q ss_pred             HHHHHHHHHhCCCCCCCCC-HHHHHHHHHcC-CCCCcchHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhc
Q 003185          734 YGCLLLELLTLQVPYMGLS-ELEIHDLIQMG-KRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCT  811 (840)
Q Consensus       734 LGvIL~ELLTG~~PF~~~~-~~el~~~I~~~-~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L~dLI~rCL  811 (840)
                      |||+||||++|+.||.... .......+... ....++.                           ..+..+.+||.+||
T Consensus       206 lG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~l~~li~~~L  258 (343)
T 3dbq_A          206 LGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPD---------------------------IPEKDLQDVLKCCL  258 (343)
T ss_dssp             HHHHHHHHHHSSCTTTTCCSHHHHHHHHHCTTSCCCCCC---------------------------CSCHHHHHHHHHHT
T ss_pred             HHHHHHHHHhCCCcchhhhhHHHHHHHHhcCCcccCCcc---------------------------cCCHHHHHHHHHHc
Confidence            9999999999999997643 22333333222 1111111                           11347899999999


Q ss_pred             ccCCCCCCCHHHHHHHHHhhc
Q 003185          812 EENPTERPTAGDLYEMFVART  832 (840)
Q Consensus       812 ~~DP~eRPSa~ELLehLe~l~  832 (840)
                      ..||.+|||+.++++|.+-..
T Consensus       259 ~~dp~~Rpt~~e~l~hp~~~~  279 (343)
T 3dbq_A          259 KRDPKQRISIPELLAHPYVQI  279 (343)
T ss_dssp             CSSTTTSCCHHHHHTSHHHHS
T ss_pred             CCChhHCCCHHHHHhCccccc
Confidence            999999999999999976544


No 171
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00  E-value=7.9e-40  Score=344.14  Aligned_cols=256  Identities=23%  Similarity=0.281  Sum_probs=202.1

Q ss_pred             CCCCCceeeeeecccCceEEEEEEE--CCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeEEec
Q 003185          502 GSFPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKIS  579 (840)
Q Consensus       502 ~~~~~y~i~~~LG~G~fG~Vy~a~~--~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~l~g~~~~  579 (840)
                      ..+++|.+.+.||+|+||.||+|.+  .+..+|+|++....     .........+.+|+.+++.++||||+++++++..
T Consensus         8 ~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-----~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~   82 (276)
T 2h6d_A            8 VKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQK-----IRSLDVVGKIKREIQNLKLFRHPHIIKLYQVIST   82 (276)
T ss_dssp             CEETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHH-----HHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEEC
T ss_pred             ceeccEEEEeeecCCCCeEEEEEEECCCCceEEEEEecccc-----ccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEec
Confidence            5678999999999999999999998  47899999975321     1111223456899999999999999999999886


Q ss_pred             CCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCCCcEE
Q 003185          580 SKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENIL  659 (840)
Q Consensus       580 ~~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKPeNIL  659 (840)
                      ..              ..++||||+++++|.+++..     ...+++..++.++.||+.||.|||++||+|+||||+|||
T Consensus        83 ~~--------------~~~lv~e~~~~~~L~~~l~~-----~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil  143 (276)
T 2h6d_A           83 PT--------------DFFMVMEYVSGGELFDYICK-----HGRVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVL  143 (276)
T ss_dssp             SS--------------EEEEEEECCCSCBHHHHHHH-----HCSCCHHHHHHHHHHHHHHHHHHHHHCSSCCCCCGGGEE
T ss_pred             CC--------------eEEEEEeccCCCcHHHHHhc-----cCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChhhEE
Confidence            54              35999999999999999976     246899999999999999999999999999999999999


Q ss_pred             EecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHHHHHH
Q 003185          660 IDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLL  739 (840)
Q Consensus       660 Ld~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLGvIL~  739 (840)
                      ++.+       +.+||+|||++........           .....||+.|+|||++.+   ....+.++||||||+++|
T Consensus       144 ~~~~-------~~~~l~dfg~~~~~~~~~~-----------~~~~~~~~~y~aPE~~~~---~~~~~~~~Di~slG~~l~  202 (276)
T 2h6d_A          144 LDAH-------MNAKIADFGLSNMMSDGEF-----------LRTSCGSPNYAAPEVISG---RLYAGPEVDIWSCGVILY  202 (276)
T ss_dssp             ECTT-------SCEEECCCCGGGCCCC------------------------CCTGGGTT---SCCCHHHHHHHHHHHHHH
T ss_pred             ECCC-------CCEEEeecccccccCCCcc-----------eecccCCccccCHHHHcC---CCCCCccchHHHHHHHHH
Confidence            9877       4599999999976543211           123468999999999875   123468999999999999


Q ss_pred             HHHhCCCCCCCCCHHHHHHHHHcCCCCCcchHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC
Q 003185          740 ELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP  819 (840)
Q Consensus       740 ELLTG~~PF~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L~dLI~rCL~~DP~eRP  819 (840)
                      +|++|..||.......+...+...... ++.                           ..+..+.+||.+||+.||.+||
T Consensus       203 ~l~~g~~p~~~~~~~~~~~~~~~~~~~-~~~---------------------------~~~~~l~~li~~~l~~~p~~Rp  254 (276)
T 2h6d_A          203 ALLCGTLPFDDEHVPTLFKKIRGGVFY-IPE---------------------------YLNRSVATLLMHMLQVDPLKRA  254 (276)
T ss_dssp             HHHHSSCSSCCSSHHHHHHHHHHCCCC-CCT---------------------------TSCHHHHHHHHHHTCSSGGGSC
T ss_pred             HHHhCCCCCCCCcHHHHHHHhhcCccc-Cch---------------------------hcCHHHHHHHHHHccCChhhCC
Confidence            999999999988877777776654321 111                           1245789999999999999999


Q ss_pred             CHHHHHHHHHh
Q 003185          820 TAGDLYEMFVA  830 (840)
Q Consensus       820 Sa~ELLehLe~  830 (840)
                      |+.+|++|..-
T Consensus       255 s~~~~l~h~~~  265 (276)
T 2h6d_A          255 TIKDIREHEWF  265 (276)
T ss_dssp             CHHHHHHSHHH
T ss_pred             CHHHHHhChhh
Confidence            99999998553


No 172
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00  E-value=1.8e-40  Score=349.95  Aligned_cols=258  Identities=21%  Similarity=0.324  Sum_probs=185.3

Q ss_pred             CCCCCceeeeeecccCceEEEEEEE--CCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeEEec
Q 003185          502 GSFPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKIS  579 (840)
Q Consensus       502 ~~~~~y~i~~~LG~G~fG~Vy~a~~--~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~l~g~~~~  579 (840)
                      ..+++|++.+.||+|+||.||+|.+  .+..+|+|++....     .......+.+.+|+.++++++||||+++++++..
T Consensus         8 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-----~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~   82 (278)
T 3cok_A            8 EKIEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKA-----MYKAGMVQRVQNEVKIHCQLKHPSILELYNYFED   82 (278)
T ss_dssp             SSGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHH-----HHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEEC
T ss_pred             cccccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhh-----hhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEcc
Confidence            4567899999999999999999997  67889999975321     1111223456899999999999999999999986


Q ss_pred             CCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCCCcEE
Q 003185          580 SKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENIL  659 (840)
Q Consensus       580 ~~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKPeNIL  659 (840)
                      ..              ..++||||+++++|.+++..    ....+++..++.++.||+.||.|||++||+||||||+|||
T Consensus        83 ~~--------------~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil  144 (278)
T 3cok_A           83 SN--------------YVYLVLEMCHNGEMNRYLKN----RVKPFSENEARHFMHQIITGMLYLHSHGILHRDLTLSNLL  144 (278)
T ss_dssp             SS--------------EEEEEEECCTTEEHHHHHHT----CSSCCCHHHHHHHHHHHHHHHHHHHHTTEECSSCCGGGEE
T ss_pred             CC--------------eEEEEEecCCCCcHHHHHhh----ccCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEE
Confidence            54              35999999999999999975    2356899999999999999999999999999999999999


Q ss_pred             EecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHHHHHH
Q 003185          660 IDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLL  739 (840)
Q Consensus       660 Ld~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLGvIL~  739 (840)
                      ++.+       +.+||+|||++.........          .....||+.|+|||++.+    ..++.++||||||+++|
T Consensus       145 i~~~-------~~~kl~dfg~~~~~~~~~~~----------~~~~~~~~~y~aPE~~~~----~~~~~~~Di~slG~il~  203 (278)
T 3cok_A          145 LTRN-------MNIKIADFGLATQLKMPHEK----------HYTLCGTPNYISPEIATR----SAHGLESDVWSLGCMFY  203 (278)
T ss_dssp             ECTT-------CCEEECCCTTCEECC------------------------------------------CTHHHHHHHHHH
T ss_pred             EcCC-------CCEEEEeecceeeccCCCCc----------ceeccCCCCcCCcchhcC----CCCCchhhHHHHHHHHH
Confidence            9877       45999999999865432111          123468999999999876    56788999999999999


Q ss_pred             HHHhCCCCCCCCCHHHHHHHHHcCCCCCcchHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC
Q 003185          740 ELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP  819 (840)
Q Consensus       740 ELLTG~~PF~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L~dLI~rCL~~DP~eRP  819 (840)
                      +|++|+.||......+....+..... .+                           ....+..+.+||.+||..||.+||
T Consensus       204 ~l~~g~~p~~~~~~~~~~~~~~~~~~-~~---------------------------~~~~~~~~~~li~~~l~~dp~~Rp  255 (278)
T 3cok_A          204 TLLIGRPPFDTDTVKNTLNKVVLADY-EM---------------------------PSFLSIEAKDLIHQLLRRNPADRL  255 (278)
T ss_dssp             HHHHSSCSSCCCSCC-----CCSSCC-CC---------------------------CTTSCHHHHHHHHHHSCSSGGGSC
T ss_pred             HHHhCCCCCCChhHHHHHHHHhhccc-CC---------------------------ccccCHHHHHHHHHHcccCHhhCC
Confidence            99999999976654333222211100 00                           011345789999999999999999


Q ss_pred             CHHHHHHHHHhh
Q 003185          820 TAGDLYEMFVAR  831 (840)
Q Consensus       820 Sa~ELLehLe~l  831 (840)
                      |+.++++|..-.
T Consensus       256 s~~~~l~h~~~~  267 (278)
T 3cok_A          256 SLSSVLDHPFMS  267 (278)
T ss_dssp             CHHHHTTSTTTC
T ss_pred             CHHHHhcCcccc
Confidence            999999986543


No 173
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00  E-value=1.2e-39  Score=368.91  Aligned_cols=297  Identities=19%  Similarity=0.204  Sum_probs=201.9

Q ss_pred             CCCCceeeeeecccCceEEEEEEE--CCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeEEecC
Q 003185          503 SFPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISS  580 (840)
Q Consensus       503 ~~~~y~i~~~LG~G~fG~Vy~a~~--~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~l~g~~~~~  580 (840)
                      .-++|++.+.||+|+||.||+|.+  .+..||+|++..  ........+    ++.+|+.+|++++||||+++++++...
T Consensus        24 i~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~--~~~~~~~~~----~~~~E~~~l~~l~h~nIv~l~~~~~~~   97 (432)
T 3n9x_A           24 VPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNR--MFEDLIDCK----RILREITILNRLKSDYIIRLYDLIIPD   97 (432)
T ss_dssp             CCTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECS--TTTSHHHHH----HHHHHHHHHHHCCCTTBCCEEEECCCS
T ss_pred             ecCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCc--hhcChHHHH----HHHHHHHHHHHcCCCCcceEEEEEecC
Confidence            347899999999999999999997  567899998642  222333333    449999999999999999999998755


Q ss_pred             CCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCCCcEEE
Q 003185          581 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILI  660 (840)
Q Consensus       581 ~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKPeNILL  660 (840)
                      ...         .....||||||+. ++|.+++..     ...+++..++.++.||+.||.|||++||+||||||+||||
T Consensus        98 ~~~---------~~~~~~lv~e~~~-~~L~~~~~~-----~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl  162 (432)
T 3n9x_A           98 DLL---------KFDELYIVLEIAD-SDLKKLFKT-----PIFLTEEHIKTILYNLLLGENFIHESGIIHRDLKPANCLL  162 (432)
T ss_dssp             CTT---------TCCCEEEEEECCS-EEHHHHHHS-----SCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE
T ss_pred             CCC---------cCCeEEEEEecCC-cCHHHHHhc-----cCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHeEE
Confidence            321         2235799999997 599999975     3569999999999999999999999999999999999999


Q ss_pred             ecccccCCCCCeEEEeecCCcccccccccccccc------------cCCCCCCCcccCCCcccchhhhhcccCCCCCCch
Q 003185          661 DLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIA------------HRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLE  728 (840)
Q Consensus       661 d~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~------------~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~k  728 (840)
                      +.+       +.+||+|||+|+............            ..........+||+.|+|||++..   ...++.+
T Consensus       163 ~~~-------~~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~---~~~~~~~  232 (432)
T 3n9x_A          163 NQD-------CSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILL---QENYTKS  232 (432)
T ss_dssp             CTT-------CCEEECCCTTCEEC-------------------------------CCCCCTTCCHHHHTT---CSCCCTH
T ss_pred             CCC-------CCEEEccCCCcccccccccccccccccccccccccccchhccccCCCCCccccCHHHHhc---CCCCCcc
Confidence            877       469999999998765432110000            000011244679999999999754   2568999


Q ss_pred             hhHHHHHHHHHHHHhC-----------CCCCCCCC-----------------HHHHHHHHHcCCCCCcchHHhhhccCcc
Q 003185          729 VDIWSYGCLLLELLTL-----------QVPYMGLS-----------------ELEIHDLIQMGKRPRLTDELEALGSCHE  780 (840)
Q Consensus       729 SDVWSLGvIL~ELLTG-----------~~PF~~~~-----------------~~el~~~I~~~~~p~l~~~l~~~~~~~~  780 (840)
                      +|||||||+||||++|           .++|.+.+                 ..+.+..|.........+.+........
T Consensus       233 ~DiwSlG~il~ell~g~~p~~~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~ql~~i~~~~g~p~~~~~~~~~~~~~  312 (432)
T 3n9x_A          233 IDIWSTGCIFAELLNMLQSHINDPTNRFPLFPGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNINKPEV  312 (432)
T ss_dssp             HHHHHHHHHHHHHHTTCTTTCSSGGGCCCSCCCSCSCC----------CHHHHHHHHHHHHHHHCSCCHHHHHTCCCHHH
T ss_pred             cccchHHHHHHHHHhcccccccccccccccCCCccccccCcccccccccccchHHHHHHHHHhcCCCCHHHHHhccCHHH
Confidence            9999999999999984           44444432                 1222222222111111111111100000


Q ss_pred             cccccc---CCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHHHh
Q 003185          781 HEVAQS---GSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAGDLYEMFVA  830 (840)
Q Consensus       781 ~~~~~~---~~~~~~~~~~~~~s~~L~dLI~rCL~~DP~eRPSa~ELLehLe~  830 (840)
                      ......   .............++.+.+||.+||..||.+|||++|+++|..-
T Consensus       313 ~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f  365 (432)
T 3n9x_A          313 IKYIKLFPHRKPINLKQKYPSISDDGINLLESMLKFNPNKRITIDQALDHPYL  365 (432)
T ss_dssp             HHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTCGGG
T ss_pred             HHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHhcCCcccCCCHHHHhcChhh
Confidence            000000   00011111223456789999999999999999999999999553


No 174
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00  E-value=9.1e-40  Score=353.28  Aligned_cols=259  Identities=22%  Similarity=0.326  Sum_probs=202.4

Q ss_pred             CCc-eeeeeecccCceEEEEEEE------CCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeEE
Q 003185          505 PSL-SSCDEAGKSVSSSLFRCKF------GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHK  577 (840)
Q Consensus       505 ~~y-~i~~~LG~G~fG~Vy~a~~------~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~l~g~~  577 (840)
                      ++| ++.+.||+|+||.||++.+      .+..||+|++...   ......+    .+.+|+.+|++++||||+++++++
T Consensus        30 ~r~~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~----~~~~E~~~l~~l~h~~iv~~~~~~  102 (318)
T 3lxp_A           30 KRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKAD---AGPQHRS----GWKQEIDILRTLYHEHIIKYKGCC  102 (318)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTT---CCHHHHH----HHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             HHHHhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccc---cChHHHH----HHHHHHHHHHhCCCcchhhEEEEE
Confidence            445 9999999999999999875      5778999997533   2223333    348999999999999999999999


Q ss_pred             ecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCCCc
Q 003185          578 ISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSEN  657 (840)
Q Consensus       578 ~~~~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKPeN  657 (840)
                      .....            ...++||||+++++|.+++..      ..+++..++.++.||+.||.|||++||+||||||+|
T Consensus       103 ~~~~~------------~~~~lv~e~~~~~~L~~~l~~------~~~~~~~~~~i~~~l~~~l~~LH~~~ivH~Dikp~N  164 (318)
T 3lxp_A          103 EDAGA------------ASLQLVMEYVPLGSLRDYLPR------HSIGLAQLLLFAQQICEGMAYLHAQHYIHRDLAARN  164 (318)
T ss_dssp             EETTT------------TEEEEEECCCTTCBHHHHGGG------SCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGG
T ss_pred             ecCCC------------ceEEEEEecccCCcHHHHHhh------CCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchhe
Confidence            86431            246999999999999999865      358999999999999999999999999999999999


Q ss_pred             EEEecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHHHH
Q 003185          658 ILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCL  737 (840)
Q Consensus       658 ILLd~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLGvI  737 (840)
                      ||++.+       +.+||+|||++...........       ......||+.|+|||++.+    ..++.++|||||||+
T Consensus       165 il~~~~-------~~~kl~Dfg~a~~~~~~~~~~~-------~~~~~~~~~~y~aPE~~~~----~~~~~~~Di~slG~i  226 (318)
T 3lxp_A          165 VLLDND-------RLVKIGDFGLAKAVPEGHEYYR-------VREDGDSPVFWYAPECLKE----YKFYYASDVWSFGVT  226 (318)
T ss_dssp             EEECTT-------CCEEECCGGGCEECCTTCSEEE-------C---CCCCGGGCCHHHHHH----CEEEHHHHHHHHHHH
T ss_pred             EEEcCC-------CCEEECCccccccccccccccc-------cccCCCCCceeeChHHhcC----CCCCcHHHHHHHHHH
Confidence            999877       4699999999987654321110       1123358889999999987    567899999999999


Q ss_pred             HHHHHhCCCCCCCCCHHH---------------HHHHHHcCCCCCcchHHhhhccCccccccccCCCCCCchhhhhhHHH
Q 003185          738 LLELLTLQVPYMGLSELE---------------IHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSF  802 (840)
Q Consensus       738 L~ELLTG~~PF~~~~~~e---------------l~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~  802 (840)
                      +|+|++|..||.......               +...+.....+.                           .....+..
T Consensus       227 l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~  279 (318)
T 3lxp_A          227 LYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERLP---------------------------RPDKCPAE  279 (318)
T ss_dssp             HHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHHHHTTCCCC---------------------------CCTTCCHH
T ss_pred             HHHHHhCCCcccccchhhhhhhcccccchhHHHHHHHHhcccCCC---------------------------CCccccHH
Confidence            999999999996532211               111111111111                           11234568


Q ss_pred             HHHHHHHhcccCCCCCCCHHHHHHHHHhhcC
Q 003185          803 LVDVFRRCTEENPTERPTAGDLYEMFVARTS  833 (840)
Q Consensus       803 L~dLI~rCL~~DP~eRPSa~ELLehLe~l~~  833 (840)
                      +.+||.+||+.||.+|||+.+|++.|+.+..
T Consensus       280 l~~li~~~l~~dP~~Rps~~ell~~L~~l~~  310 (318)
T 3lxp_A          280 VYHLMKNCWETEASFRPTFENLIPILKTVHE  310 (318)
T ss_dssp             HHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHcCCCcccCcCHHHHHHHHHHHHH
Confidence            9999999999999999999999999998764


No 175
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00  E-value=1.3e-39  Score=349.69  Aligned_cols=272  Identities=26%  Similarity=0.324  Sum_probs=199.9

Q ss_pred             CCCCCceee-eeecccCceEEEEEEE--CCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhC-CCCCcceeeeEE
Q 003185          502 GSFPSLSSC-DEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEMYGHK  577 (840)
Q Consensus       502 ~~~~~y~i~-~~LG~G~fG~Vy~a~~--~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L-~HpNIV~l~g~~  577 (840)
                      ..-+.|++. +.||+|+||.||+|.+  .+..||+|++.....    ...    ..+.+|+.++.++ +||||+++++++
T Consensus         9 ~~~~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~----~~~----~~~~~E~~~l~~~~~h~~i~~~~~~~   80 (316)
T 2ac3_A            9 RFEDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPG----HIR----SRVFREVEMLYQCQGHRNVLELIEFF   80 (316)
T ss_dssp             CTTTSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSS----CCH----HHHHHHHHHHHHTCCCTTBCCEEEEE
T ss_pred             ccceeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcc----hhH----HHHHHHHHHHHHhcCCCCeeeEEEEE
Confidence            345678885 7899999999999986  678999999754321    112    2348999999995 699999999999


Q ss_pred             ecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCCCc
Q 003185          578 ISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSEN  657 (840)
Q Consensus       578 ~~~~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKPeN  657 (840)
                      .....              .||||||+++++|.+++..     ...+++..++.++.||+.||+|||++||+||||||+|
T Consensus        81 ~~~~~--------------~~lv~e~~~~~~L~~~l~~-----~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~N  141 (316)
T 2ac3_A           81 EEEDR--------------FYLVFEKMRGGSILSHIHK-----RRHFNELEASVVVQDVASALDFLHNKGIAHRDLKPEN  141 (316)
T ss_dssp             EETTE--------------EEEEEECCTTCBHHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGG
T ss_pred             eeCCE--------------EEEEEEcCCCCcHHHHHhc-----cCCCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHH
Confidence            86553              5999999999999999986     2468999999999999999999999999999999999


Q ss_pred             EEEecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccC-CCCCCchhhHHHHHH
Q 003185          658 ILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHK-PNLYGLEVDIWSYGC  736 (840)
Q Consensus       658 ILLd~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~-~~~~s~kSDVWSLGv  736 (840)
                      ||++.++.    ...+||+|||++...........   ..........||+.|+|||++.+... ...++.++|||||||
T Consensus       142 il~~~~~~----~~~~kl~Dfg~~~~~~~~~~~~~---~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~  214 (316)
T 2ac3_A          142 ILCEHPNQ----VSPVKICDFDLGSGIKLNGDCSP---ISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGV  214 (316)
T ss_dssp             EEESCSSS----SCSEEECCTTCCC----------------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHH
T ss_pred             EEEccCCC----cCceEEEEccCccccccCCcccc---ccccccccccCCcCccChHHhhcccccccCCCcccccHhHHH
Confidence            99987632    24599999999976543211100   00011123469999999999874110 023678999999999


Q ss_pred             HHHHHHhCCCCCCCCCH---------------HHHHHHHHcCCCCCcchHHhhhccCccccccccCCCCCCchhhhhhHH
Q 003185          737 LLLELLTLQVPYMGLSE---------------LEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLS  801 (840)
Q Consensus       737 IL~ELLTG~~PF~~~~~---------------~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~  801 (840)
                      ++|+|++|+.||.+...               ..+...+...... ++.                       ......+.
T Consensus       215 il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~-----------------------~~~~~~~~  270 (316)
T 2ac3_A          215 ILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEGKYE-FPD-----------------------KDWAHISC  270 (316)
T ss_dssp             HHHHHHHSSCSCCCCCCSCSCC----CCHHHHHHHHHHHHHCCCC-CCH-----------------------HHHTTSCH
T ss_pred             HHHHHHHCCCCCcccccccccccccccchhHHHHHHHHHhccCcc-cCc-----------------------hhcccCCH
Confidence            99999999999976532               2334444443221 111                       01122356


Q ss_pred             HHHHHHHHhcccCCCCCCCHHHHHHHHHhh
Q 003185          802 FLVDVFRRCTEENPTERPTAGDLYEMFVAR  831 (840)
Q Consensus       802 ~L~dLI~rCL~~DP~eRPSa~ELLehLe~l  831 (840)
                      .+.+||.+||..||.+|||+.|+++|..-.
T Consensus       271 ~~~~li~~~L~~dP~~Rps~~e~l~hp~~~  300 (316)
T 2ac3_A          271 AAKDLISKLLVRDAKQRLSAAQVLQHPWVQ  300 (316)
T ss_dssp             HHHHHHHHHSCSSTTTSCCHHHHHHSTTCC
T ss_pred             HHHHHHHHHhhCChhhCCCHHHHhcChhhc
Confidence            799999999999999999999999986543


No 176
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00  E-value=1.7e-39  Score=345.07  Aligned_cols=255  Identities=24%  Similarity=0.339  Sum_probs=200.8

Q ss_pred             CCCceeeeeecccCceEEEEEEE--CCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeEEecCC
Q 003185          504 FPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK  581 (840)
Q Consensus       504 ~~~y~i~~~LG~G~fG~Vy~a~~--~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~l~g~~~~~~  581 (840)
                      -..|.+.+.||+|+||.||+|.+  .+..+|+|++....  ......+    .+.+|+.++++++||||+++++++....
T Consensus        25 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~--~~~~~~~----~~~~e~~~l~~l~h~~iv~~~~~~~~~~   98 (290)
T 1t4h_A           25 GRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRK--LTKSERQ----RFKEEAEMLKGLQHPNIVRFYDSWESTV   98 (290)
T ss_dssp             SCEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGG--SCHHHHH----HHHHHHHHHTTCCCTTBCCEEEEEEEES
T ss_pred             ceeEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchh--hCHHHHH----HHHHHHHHHHhCCCCCeeeeeeeecccc
Confidence            34589999999999999999998  45667777765332  2333333    3489999999999999999999987532


Q ss_pred             CCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCC--eecccCCCCcEE
Q 003185          582 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKH--IMHRDIKSENIL  659 (840)
Q Consensus       582 ~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~g--IVHRDLKPeNIL  659 (840)
                      .          .....++||||+++++|.+++..     ...+++..++.|+.||+.||.|||++|  |+||||||+|||
T Consensus        99 ~----------~~~~~~lv~e~~~~~~L~~~l~~-----~~~~~~~~~~~~~~qi~~~l~~lH~~~~~i~H~dikp~Nil  163 (290)
T 1t4h_A           99 K----------GKKCIVLVTELMTSGTLKTYLKR-----FKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIF  163 (290)
T ss_dssp             S----------SCEEEEEEEECCCSCBHHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEE
T ss_pred             C----------CCceEEEEEEecCCCCHHHHHHH-----ccCCCHHHHHHHHHHHHHHHHHHHcCCCCEEECCCCHHHEE
Confidence            1          12357999999999999999986     256899999999999999999999999  999999999999


Q ss_pred             Ee-cccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHHHHH
Q 003185          660 ID-LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLL  738 (840)
Q Consensus       660 Ld-~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLGvIL  738 (840)
                      ++ .+       +.+||+|||++.......            .....||+.|+|||++.+     .++.++|||||||++
T Consensus       164 ~~~~~-------~~~kl~Dfg~~~~~~~~~------------~~~~~~t~~y~aPE~~~~-----~~~~~~Di~slG~~l  219 (290)
T 1t4h_A          164 ITGPT-------GSVKIGDLGLATLKRASF------------AKAVIGTPEFMAPEMYEE-----KYDESVDVYAFGMCM  219 (290)
T ss_dssp             ESSTT-------SCEEECCTTGGGGCCTTS------------BEESCSSCCCCCGGGGGT-----CCCTHHHHHHHHHHH
T ss_pred             EECCC-------CCEEEeeCCCcccccccc------------cccccCCcCcCCHHHHhc-----cCCCcchHHHHHHHH
Confidence            97 34       469999999996543321            123468999999999863     478999999999999


Q ss_pred             HHHHhCCCCCCCCC-HHHHHHHHHcCCCCCcchHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCC
Q 003185          739 LELLTLQVPYMGLS-ELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTE  817 (840)
Q Consensus       739 ~ELLTG~~PF~~~~-~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L~dLI~rCL~~DP~e  817 (840)
                      |+|++|..||.... .......+..+..+...                          ....++.+.+||.+||..||.+
T Consensus       220 ~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~l~~li~~~l~~dp~~  273 (290)
T 1t4h_A          220 LEMATSEYPYSECQNAAQIYRRVTSGVKPASF--------------------------DKVAIPEVKEIIEGCIRQNKDE  273 (290)
T ss_dssp             HHHHHSSCTTTTCSSHHHHHHHHTTTCCCGGG--------------------------GGCCCHHHHHHHHHHSCSSGGG
T ss_pred             HHHHhCCCCCCCcCcHHHHHHHHhccCCcccc--------------------------CCCCCHHHHHHHHHHccCChhh
Confidence            99999999998754 44444444443222110                          1112357899999999999999


Q ss_pred             CCCHHHHHHHHH
Q 003185          818 RPTAGDLYEMFV  829 (840)
Q Consensus       818 RPSa~ELLehLe  829 (840)
                      |||+.+|++|.+
T Consensus       274 Rps~~ell~h~~  285 (290)
T 1t4h_A          274 RYSIKDLLNHAF  285 (290)
T ss_dssp             SCCHHHHHTSGG
T ss_pred             CCCHHHHhhCcc
Confidence            999999999854


No 177
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00  E-value=8.6e-40  Score=350.03  Aligned_cols=257  Identities=24%  Similarity=0.240  Sum_probs=207.4

Q ss_pred             CCCceeeeeecccCceEEEEEEE--CCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeEEecCC
Q 003185          504 FPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK  581 (840)
Q Consensus       504 ~~~y~i~~~LG~G~fG~Vy~a~~--~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~l~g~~~~~~  581 (840)
                      .++|.+.+.||+|+||.||+|.+  .+..+|+|++.....    ...+    .+.+|+.++++++||||+++++++....
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~----~~~~----~~~~e~~~l~~l~h~~i~~~~~~~~~~~   79 (304)
T 2jam_A            8 RKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPA----FRDS----SLENEIAVLKKIKHENIVTLEDIYESTT   79 (304)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC--------------HHHHHHHHHHHCCCTTBCCEEEEEECSS
T ss_pred             hccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccc----cchH----HHHHHHHHHHhCCCCCeeehhhhcccCC
Confidence            35799999999999999999997  578899999764321    1112    3489999999999999999999988654


Q ss_pred             CCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCCCcEEEe
Q 003185          582 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID  661 (840)
Q Consensus       582 ~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKPeNILLd  661 (840)
                                    ..++||||+++++|.+++..     ...+++..++.++.||+.||.|||++||+||||||+|||+.
T Consensus        80 --------------~~~lv~e~~~~~~L~~~l~~-----~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dikp~NIl~~  140 (304)
T 2jam_A           80 --------------HYYLVMQLVSGGELFDRILE-----RGVYTEKDASLVIQQVLSAVKYLHENGIVHRDLKPENLLYL  140 (304)
T ss_dssp             --------------EEEEEECCCCSCBHHHHHHH-----HSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCSCCGGGCEES
T ss_pred             --------------EEEEEEEcCCCccHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEe
Confidence                          35999999999999999876     24689999999999999999999999999999999999994


Q ss_pred             cccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHHHHHHHH
Q 003185          662 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL  741 (840)
Q Consensus       662 ~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLGvIL~EL  741 (840)
                      ..+    ..+.+||+|||++.......            .....||+.|+|||++.+    ..++.++|||||||++|+|
T Consensus       141 ~~~----~~~~~kl~Dfg~~~~~~~~~------------~~~~~~~~~y~aPE~~~~----~~~~~~~Di~slG~il~~l  200 (304)
T 2jam_A          141 TPE----ENSKIMITDFGLSKMEQNGI------------MSTACGTPGYVAPEVLAQ----KPYSKAVDCWSIGVITYIL  200 (304)
T ss_dssp             SSS----TTCCEEBCSCSTTCCCCCBT------------THHHHSCCCBCCTTTBSS----CSCCHHHHHHHHHHHHHHH
T ss_pred             cCC----CCCCEEEccCCcceecCCCc------------cccccCCCCccChHHhcc----CCCCchhhHHHHHHHHHHH
Confidence            321    22569999999987543211            122358999999999875    6789999999999999999


Q ss_pred             HhCCCCCCCCCHHHHHHHHHcCCCCCcchHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH
Q 003185          742 LTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA  821 (840)
Q Consensus       742 LTG~~PF~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L~dLI~rCL~~DP~eRPSa  821 (840)
                      ++|..||.......+...+..+.......                        .....+..+.+||.+||..||.+|||+
T Consensus       201 ~~g~~pf~~~~~~~~~~~i~~~~~~~~~~------------------------~~~~~~~~~~~li~~~l~~dp~~Rps~  256 (304)
T 2jam_A          201 LCGYPPFYEETESKLFEKIKEGYYEFESP------------------------FWDDISESAKDFICHLLEKDPNERYTC  256 (304)
T ss_dssp             HHSSCTTTTSCHHHHHHHHHHCCCCCCTT------------------------TTTTSCHHHHHHHHHHHCSSTTTSCCH
T ss_pred             HHCCCCCCCCCHHHHHHHHHcCCCCCCcc------------------------ccccCCHHHHHHHHHHcCCChhHCcCH
Confidence            99999999988888887777654321110                        011235679999999999999999999


Q ss_pred             HHHHHHHHhh
Q 003185          822 GDLYEMFVAR  831 (840)
Q Consensus       822 ~ELLehLe~l  831 (840)
                      .++++|..-.
T Consensus       257 ~~~l~h~~~~  266 (304)
T 2jam_A          257 EKALSHPWID  266 (304)
T ss_dssp             HHHHTSHHHH
T ss_pred             HHHhcCcccc
Confidence            9999986543


No 178
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00  E-value=6.3e-40  Score=353.14  Aligned_cols=266  Identities=23%  Similarity=0.248  Sum_probs=200.4

Q ss_pred             CCCCCceeeeeecccCceEEEEEEE--CCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeEEec
Q 003185          502 GSFPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKIS  579 (840)
Q Consensus       502 ~~~~~y~i~~~LG~G~fG~Vy~a~~--~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~l~g~~~~  579 (840)
                      ..+++|++.+.||+|+||.||+|.+  .+..||+|++..... ..    ..+...+.+|+.++++++||||+++++++..
T Consensus        31 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~----~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~  105 (309)
T 2h34_A           31 TQFGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLS-SD----PVFRTRMQREARTAGRLQEPHVVPIHDFGEI  105 (309)
T ss_dssp             ---CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGG-GS----HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEE
T ss_pred             cEeccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccc-cC----HHHHHHHHHHHHHHhhcCCCCeeEEEEEEee
Confidence            5789999999999999999999997  577899998643321 11    2233455899999999999999999999986


Q ss_pred             CCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCCCcEE
Q 003185          580 SKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENIL  659 (840)
Q Consensus       580 ~~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKPeNIL  659 (840)
                      ...              .|+||||+++++|.+++..     ...+++..++.++.||+.||.|||++||+||||||+|||
T Consensus       106 ~~~--------------~~lv~e~~~~~~L~~~l~~-----~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~NIl  166 (309)
T 2h34_A          106 DGQ--------------LYVDMRLINGVDLAAMLRR-----QGPLAPPRAVAIVRQIGSALDAAHAAGATHRDVKPENIL  166 (309)
T ss_dssp             TTE--------------EEEEEECCCCEEHHHHHHH-----HCSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEE
T ss_pred             CCe--------------EEEEEEecCCCCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCcCCcCCCChHHEE
Confidence            553              5999999999999999986     246899999999999999999999999999999999999


Q ss_pred             EecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHHHHHH
Q 003185          660 IDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLL  739 (840)
Q Consensus       660 Ld~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLGvIL~  739 (840)
                      ++.+       +.+||+|||++.........         ......||+.|+|||++.+    ..++.++||||||+++|
T Consensus       167 ~~~~-------~~~kl~Dfg~~~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~----~~~~~~~Di~slG~il~  226 (309)
T 2h34_A          167 VSAD-------DFAYLVDFGIASATTDEKLT---------QLGNTVGTLYYMAPERFSE----SHATYRADIYALTCVLY  226 (309)
T ss_dssp             ECTT-------SCEEECSCCC-------------------------CCGGGCCGGGTCC--------CCCHHHHHHHHHH
T ss_pred             EcCC-------CCEEEecCccCccccccccc---------cccccCCCcCccCHHHHcC----CCCCchHhHHHHHHHHH
Confidence            9877       45999999999765432211         1123468999999999875    56788999999999999


Q ss_pred             HHHhCCCCCCCCCHHHHHHHHHcCCCCCcchHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC
Q 003185          740 ELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP  819 (840)
Q Consensus       740 ELLTG~~PF~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L~dLI~rCL~~DP~eRP  819 (840)
                      +|++|+.||.+.....+...+..... ....                        .....+..+.+||.+||..||.+||
T Consensus       227 ~l~~g~~pf~~~~~~~~~~~~~~~~~-~~~~------------------------~~~~~~~~l~~li~~~l~~dP~~Rp  281 (309)
T 2h34_A          227 ECLTGSPPYQGDQLSVMGAHINQAIP-RPST------------------------VRPGIPVAFDAVIARGMAKNPEDRY  281 (309)
T ss_dssp             HHHHSSCSSCSCHHHHHHHHHHSCCC-CGGG------------------------TSTTCCTHHHHHHHHHTCSSGGGSC
T ss_pred             HHHHCCCCCCCchHHHHHHHhccCCC-Cccc------------------------cCCCCCHHHHHHHHHhccCCHHHHH
Confidence            99999999988766554444443321 1110                        0112345789999999999999999


Q ss_pred             -CHHHHHHHHHhhcCCCC
Q 003185          820 -TAGDLYEMFVARTSSSI  836 (840)
Q Consensus       820 -Sa~ELLehLe~l~~~~~  836 (840)
                       +++++++.|+.......
T Consensus       282 ~s~~~l~~~l~~~l~~~~  299 (309)
T 2h34_A          282 VTCGDLSAAAHAALATAD  299 (309)
T ss_dssp             SSHHHHHHHHHHTCC---
T ss_pred             HhHHHHHHHHHHHHHhhc
Confidence             99999999998876543


No 179
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00  E-value=5.6e-40  Score=347.40  Aligned_cols=265  Identities=22%  Similarity=0.315  Sum_probs=201.7

Q ss_pred             CCCCCceeeeeecccCceEEEEEEEC---Ce--eEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeE
Q 003185          502 GSFPSLSSCDEAGKSVSSSLFRCKFG---SA--DAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGH  576 (840)
Q Consensus       502 ~~~~~y~i~~~LG~G~fG~Vy~a~~~---~~--~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~l~g~  576 (840)
                      ...++|++.+.||+|+||.||+|.+.   +.  .+|+|+....... .....    +.+.+|+.++++++||||++++++
T Consensus        15 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~   89 (291)
T 1u46_A           15 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLS-QPEAM----DDFIREVNAMHSLDHRNLIRLYGV   89 (291)
T ss_dssp             CCGGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC---------CHHH----HHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred             cchhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccC-CHHHH----HHHHHHHHHHHhCCCCCcccEEEE
Confidence            34568999999999999999999862   22  4788875432211 11222    345899999999999999999999


Q ss_pred             EecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCCC
Q 003185          577 KISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSE  656 (840)
Q Consensus       577 ~~~~~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKPe  656 (840)
                      +....               .++||||+++++|.+++...    ...+++..++.++.||+.||.|||++||+||||||+
T Consensus        90 ~~~~~---------------~~~v~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~  150 (291)
T 1u46_A           90 VLTPP---------------MKMVTELAPLGSLLDRLRKH----QGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAAR  150 (291)
T ss_dssp             ECSSS---------------CEEEEECCTTCBHHHHHHHH----GGGSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGG
T ss_pred             EccCC---------------ceeeEecccCCCHHHHHHhc----cCCcCHHHHHHHHHHHHHHHHHHHhCCcccCCCchh
Confidence            87543               38999999999999999862    245899999999999999999999999999999999


Q ss_pred             cEEEecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHHH
Q 003185          657 NILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGC  736 (840)
Q Consensus       657 NILLd~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLGv  736 (840)
                      |||++.+       +.+||+|||++...........       ......+|+.|+|||++.+    ..++.++||||||+
T Consensus       151 Nili~~~-------~~~kl~Dfg~~~~~~~~~~~~~-------~~~~~~~~~~y~aPE~~~~----~~~~~~~Di~slG~  212 (291)
T 1u46_A          151 NLLLATR-------DLVKIGDFGLMRALPQNDDHYV-------MQEHRKVPFAWCAPESLKT----RTFSHASDTWMFGV  212 (291)
T ss_dssp             GEEEEET-------TEEEECCCTTCEECCC-CCEEE-------C-----CCGGGCCHHHHHH----CEEEHHHHHHHHHH
T ss_pred             eEEEcCC-------CCEEEccccccccccccccchh-------hhccCCCCceeeCchhhcC----CCCCchhhHHHHHH
Confidence            9999877       4699999999987644321100       1123357889999999986    56789999999999


Q ss_pred             HHHHHHh-CCCCCCCCCHHHHHHHHHcCCC-CCcchHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccC
Q 003185          737 LLLELLT-LQVPYMGLSELEIHDLIQMGKR-PRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEEN  814 (840)
Q Consensus       737 IL~ELLT-G~~PF~~~~~~el~~~I~~~~~-p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L~dLI~rCL~~D  814 (840)
                      ++|+|++ |+.||.+.+..++...+..... +..+                           ...+..+.+||.+||..|
T Consensus       213 il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~l~~li~~~l~~~  265 (291)
T 1u46_A          213 TLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRP---------------------------EDCPQDIYNVMVQCWAHK  265 (291)
T ss_dssp             HHHHHHTTSCCTTTTCCHHHHHHHHHTSCCCCCCC---------------------------TTCCHHHHHHHHHHTCSS
T ss_pred             HHHHHHhCCCCCcccCCHHHHHHHHHccCCCCCCC---------------------------cCcCHHHHHHHHHHccCC
Confidence            9999999 9999999888887777765422 1111                           123567999999999999


Q ss_pred             CCCCCCHHHHHHHHHhhcCCC
Q 003185          815 PTERPTAGDLYEMFVARTSSS  835 (840)
Q Consensus       815 P~eRPSa~ELLehLe~l~~~~  835 (840)
                      |.+|||+.+|+++|+.+....
T Consensus       266 p~~Rps~~~l~~~l~~~~~~~  286 (291)
T 1u46_A          266 PEDRPTFVALRDFLLEAQPTD  286 (291)
T ss_dssp             GGGSCCHHHHHHHHHHHC---
T ss_pred             cccCcCHHHHHHHHHHhCccc
Confidence            999999999999999887644


No 180
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00  E-value=3.6e-39  Score=351.52  Aligned_cols=297  Identities=19%  Similarity=0.210  Sum_probs=209.1

Q ss_pred             CCCCCceeeeeecccCceEEEEEEEC--CeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeEEec
Q 003185          502 GSFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKIS  579 (840)
Q Consensus       502 ~~~~~y~i~~~LG~G~fG~Vy~a~~~--~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~l~g~~~~  579 (840)
                      ...++|++.+.||+|+||.||+|.+.  +..||+|++...   ......    ..+.+|+.++++++||||+++++++..
T Consensus         8 ~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~----~~~~~E~~~l~~l~h~~iv~~~~~~~~   80 (353)
T 2b9h_A            8 NISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPF---DKPLFA----LRTLREIKILKHFKHENIITIFNIQRP   80 (353)
T ss_dssp             CSCTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCC---SSHHHH----HHHHHHHHHHHHCCCTTBCCEEEECCC
T ss_pred             ccccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeeccc---ccchHH----HHHHHHHHHHHhCcCCCcCCeeeeecc
Confidence            34578999999999999999999984  788999986421   122222    344899999999999999999998765


Q ss_pred             CCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCCCcEE
Q 003185          580 SKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENIL  659 (840)
Q Consensus       580 ~~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKPeNIL  659 (840)
                      ....         .....++||||+. ++|.+++..      ..+++..++.++.||+.||.|||++||+||||||+|||
T Consensus        81 ~~~~---------~~~~~~lv~e~~~-~~L~~~~~~------~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~Nil  144 (353)
T 2b9h_A           81 DSFE---------NFNEVYIIQELMQ-TDLHRVIST------QMLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLL  144 (353)
T ss_dssp             SCST---------TCCCEEEEECCCS-EEHHHHHHH------CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEE
T ss_pred             cccC---------ccceEEEEEeccC-ccHHHHHhh------cCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeE
Confidence            4311         2235799999997 599999976      46899999999999999999999999999999999999


Q ss_pred             EecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHHHHHH
Q 003185          660 IDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLL  739 (840)
Q Consensus       660 Ld~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLGvIL~  739 (840)
                      ++.+       +.+||+|||++........................||+.|+|||++..   ...++.++|||||||++|
T Consensus       145 ~~~~-------~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~~Di~slG~il~  214 (353)
T 2b9h_A          145 INSN-------CDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLT---SAKYSRAMDVWSCGCILA  214 (353)
T ss_dssp             ECTT-------CCEEECCCTTCEECC----------------CCCCCCGGGCCHHHHHS---CCCCCHHHHHHHHHHHHH
T ss_pred             EcCC-------CcEEEEecccccccccccccccCccccccchhhccccccccCCeeecc---CCCccchhhHHHHHHHHH
Confidence            9877       459999999998765432211100000111223578999999999864   356899999999999999


Q ss_pred             HHHhCCCCCCCCCHHHHHHHHHcC-CCCCcchHHhhhccCccccccccCCC---CCCchhhhhhHHHHHHHHHHhcccCC
Q 003185          740 ELLTLQVPYMGLSELEIHDLIQMG-KRPRLTDELEALGSCHEHEVAQSGSG---FEKPEAELETLSFLVDVFRRCTEENP  815 (840)
Q Consensus       740 ELLTG~~PF~~~~~~el~~~I~~~-~~p~l~~~l~~~~~~~~~~~~~~~~~---~~~~~~~~~~s~~L~dLI~rCL~~DP  815 (840)
                      +|++|..||.+.+..+....+... ..+.....+.................   ..........+..+.+||.+||..||
T Consensus       215 ~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP  294 (353)
T 2b9h_A          215 ELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDP  294 (353)
T ss_dssp             HHHHSSCSCCCSSHHHHHHHHHHHHCCCCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSG
T ss_pred             HHHhCCCCCCCCCcHHHHHHHHHHhCCCchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCc
Confidence            999999999988876655554432 11111110000000000000000000   00011123456789999999999999


Q ss_pred             CCCCCHHHHHHHHHhh
Q 003185          816 TERPTAGDLYEMFVAR  831 (840)
Q Consensus       816 ~eRPSa~ELLehLe~l  831 (840)
                      .+|||+.++++|..-.
T Consensus       295 ~~Rpt~~ell~hp~~~  310 (353)
T 2b9h_A          295 AKRITAKEALEHPYLQ  310 (353)
T ss_dssp             GGSCCHHHHHTSGGGT
T ss_pred             ccCCCHHHHhcCcccc
Confidence            9999999999986543


No 181
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00  E-value=6e-40  Score=381.77  Aligned_cols=260  Identities=25%  Similarity=0.343  Sum_probs=214.3

Q ss_pred             CCCCCceeeeeecccCceEEEEEEECC-eeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeEEecC
Q 003185          502 GSFPSLSSCDEAGKSVSSSLFRCKFGS-ADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISS  580 (840)
Q Consensus       502 ~~~~~y~i~~~LG~G~fG~Vy~a~~~~-~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~l~g~~~~~  580 (840)
                      +..++|++.+.||+|+||.||+|.+.+ ..||||++....  ..   .+.    +.+|+.+|++|+|||||++++++.. 
T Consensus       264 i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~--~~---~~~----~~~E~~~l~~l~hpniv~~~~~~~~-  333 (535)
T 2h8h_A          264 IPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT--MS---PEA----FLQEAQVMKKLRHEKLVQLYAVVSE-  333 (535)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTS--SC---HHH----HHHHHHHHHHCCCTTBCCEEEEECS-
T ss_pred             cchhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCC--CC---HHH----HHHHHHHHHhCCCCCEeeEEEEEee-
Confidence            455789999999999999999999854 679999865322  11   223    4899999999999999999999864 


Q ss_pred             CCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCCCcEEE
Q 003185          581 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILI  660 (840)
Q Consensus       581 ~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKPeNILL  660 (840)
                      ..              .||||||+.+|+|.+++...   ....+++..++.|+.||+.||.|||++|||||||||+||||
T Consensus       334 ~~--------------~~lv~e~~~~gsL~~~l~~~---~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll  396 (535)
T 2h8h_A          334 EP--------------IYIVTEYMSKGSLLDFLKGE---TGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILV  396 (535)
T ss_dssp             SS--------------CEEEECCCTTEEHHHHHSHH---HHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE
T ss_pred             cc--------------ceEeeehhcCCcHHHHHhhc---CCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEE
Confidence            22              39999999999999999752   12458999999999999999999999999999999999999


Q ss_pred             ecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHHHHHHH
Q 003185          661 DLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLE  740 (840)
Q Consensus       661 d~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLGvIL~E  740 (840)
                      +.+       +.+||+|||+++.+.......         .....++..|+|||++..    ..++.++|||||||+|||
T Consensus       397 ~~~-------~~~kl~DFG~a~~~~~~~~~~---------~~~~~~~~~y~aPE~~~~----~~~~~~sDvwSlGv~l~e  456 (535)
T 2h8h_A          397 GEN-------LVCKVADFGLARLIEDNEYTA---------RQGAKFPIKWTAPEAALY----GRFTIKSDVWSFGILLTE  456 (535)
T ss_dssp             CGG-------GCEEECCTTSTTTCCCHHHHT---------TCSTTSCGGGSCHHHHHH----CCCCHHHHHHHHHHHHHH
T ss_pred             cCC-------CcEEEcccccceecCCCceec---------ccCCcCcccccCHHHhcc----CCCCchhhHHHHHHHHHH
Confidence            877       469999999998764322110         122347889999999986    678999999999999999


Q ss_pred             HHh-CCCCCCCCCHHHHHHHHHcCCCCCcchHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC
Q 003185          741 LLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP  819 (840)
Q Consensus       741 LLT-G~~PF~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L~dLI~rCL~~DP~eRP  819 (840)
                      |++ |+.||.+....++...+..+.+...+.                           .++..+.+||.+||..||.+||
T Consensus       457 l~t~g~~P~~~~~~~~~~~~i~~~~~~~~~~---------------------------~~~~~l~~li~~cl~~dP~~RP  509 (535)
T 2h8h_A          457 LTTKGRVPYPGMVNREVLDQVERGYRMPCPP---------------------------ECPESLHDLMCQCWRKEPEERP  509 (535)
T ss_dssp             HTTTTCCSSTTCCHHHHHHHHHTTCCCCCCT---------------------------TCCHHHHHHHHHHTCSSGGGSC
T ss_pred             HHhCCCCCCCCCCHHHHHHHHHcCCCCCCCC---------------------------CCCHHHHHHHHHHcCCChhHCc
Confidence            999 999999999888888887765433331                           1345789999999999999999


Q ss_pred             CHHHHHHHHHhhcCCC
Q 003185          820 TAGDLYEMFVARTSSS  835 (840)
Q Consensus       820 Sa~ELLehLe~l~~~~  835 (840)
                      |+.+|++.|+.+....
T Consensus       510 t~~~l~~~L~~~~~~~  525 (535)
T 2h8h_A          510 TFEYLQAFLEDYFTST  525 (535)
T ss_dssp             CHHHHHHHHHTSSCCC
T ss_pred             CHHHHHHHHHHHhhcc
Confidence            9999999999987543


No 182
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00  E-value=1.4e-39  Score=353.76  Aligned_cols=264  Identities=24%  Similarity=0.346  Sum_probs=205.5

Q ss_pred             CCCCCceeeeeecccCceEEEEEEE--CCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHH-HHhCCCCCcceeeeEEe
Q 003185          502 GSFPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRM-LGALRHSCIVEMYGHKI  578 (840)
Q Consensus       502 ~~~~~y~i~~~LG~G~fG~Vy~a~~--~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~i-L~~L~HpNIV~l~g~~~  578 (840)
                      ...++|++.+.||+|+||.||+|.+  .+..||+|++....  ... ....    +..|+.+ ++.++||||+++++++.
T Consensus        48 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~-~~~~----~~~e~~~~~~~~~h~~iv~~~~~~~  120 (340)
T 3an0_A           48 VKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATV--NSQ-EQKR----LLMDLDISMRTVDCPFTVTFYGALF  120 (340)
T ss_dssp             CCSSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCC--CCH-HHHH----HHHHHHHHHTTCCCTTTCCEEEEEE
T ss_pred             EehhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEecccc--CcH-HHHH----HHHHHHHHHhhcCCCcEEEEeeEEE
Confidence            5678999999999999999999998  68899999865332  222 2222    2556655 77889999999999998


Q ss_pred             cCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhC-CeecccCCCCc
Q 003185          579 SSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSK-HIMHRDIKSEN  657 (840)
Q Consensus       579 ~~~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~-gIVHRDLKPeN  657 (840)
                      ....              .||||||+++ +|.+++..... ....+++..++.++.||+.||.|||++ ||+||||||+|
T Consensus       121 ~~~~--------------~~lv~e~~~~-~L~~~l~~~~~-~~~~l~~~~~~~i~~qi~~~l~~lH~~~~ivH~Dlkp~N  184 (340)
T 3an0_A          121 REGD--------------VWICMELMDT-SLDKFYKQVID-KGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSN  184 (340)
T ss_dssp             CSSC--------------EEEEECCCSE-EHHHHHHHHHH-TSCCCCHHHHHHHHHHHHHHHHHHHHHTCCCCCSCCSTT
T ss_pred             eCCc--------------EEEEHHHhhC-cHHHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHH
Confidence            6553              4999999985 99999875433 236799999999999999999999987 99999999999


Q ss_pred             EEEecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHHHH
Q 003185          658 ILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCL  737 (840)
Q Consensus       658 ILLd~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLGvI  737 (840)
                      ||++.+       +.+||+|||+++........           ....||+.|+|||++.+......++.++|||||||+
T Consensus       185 Il~~~~-------~~~kl~Dfg~~~~~~~~~~~-----------~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~i  246 (340)
T 3an0_A          185 VLINAL-------GQVKMCDFGISGYLVDSVAK-----------TIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGIT  246 (340)
T ss_dssp             EEECST-------TCEEECCCSHHHHHSCHHHH-----------HHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHH
T ss_pred             EEECCC-------CCEEEeeCCCceeccccccc-----------ccCCCCccccCccccccccccCCCCchhhHHHHHHH
Confidence            999877       46999999999866432211           123589999999998653233568999999999999


Q ss_pred             HHHHHhCCCCCCCC-CHHHHHHHHHcCCCCCcchHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCC
Q 003185          738 LLELLTLQVPYMGL-SELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPT  816 (840)
Q Consensus       738 L~ELLTG~~PF~~~-~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L~dLI~rCL~~DP~  816 (840)
                      ||||++|+.||... ........+.....+.++.                          ...+..+.+||.+||..||.
T Consensus       247 l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~~~li~~~l~~dp~  300 (340)
T 3an0_A          247 MIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPA--------------------------DKFSAEFVDFTSQCLKKNSK  300 (340)
T ss_dssp             HHHHHHTSCSSCCCSCHHHHHHHHHHSCCCCCCG--------------------------GGSCHHHHHHHHHHTCSSGG
T ss_pred             HHHHHHCCCCCccccchHHHHHHHhcCCCCCCCc--------------------------ccCCHHHHHHHHHHccCCcc
Confidence            99999999999764 3444444444433322221                          12355799999999999999


Q ss_pred             CCCCHHHHHHHHHhhc
Q 003185          817 ERPTAGDLYEMFVART  832 (840)
Q Consensus       817 eRPSa~ELLehLe~l~  832 (840)
                      +|||+.+|++|..-..
T Consensus       301 ~Rps~~ell~hp~f~~  316 (340)
T 3an0_A          301 ERPTYPELMQHPFFTL  316 (340)
T ss_dssp             GSCCHHHHTTSHHHHH
T ss_pred             cCcCHHHHhcCcCccc
Confidence            9999999999865433


No 183
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00  E-value=4.2e-40  Score=365.34  Aligned_cols=282  Identities=20%  Similarity=0.234  Sum_probs=195.0

Q ss_pred             CCceeeeeecccCceEEEEEEE--CCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeEEecCCC
Q 003185          505 PSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW  582 (840)
Q Consensus       505 ~~y~i~~~LG~G~fG~Vy~a~~--~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~l~g~~~~~~~  582 (840)
                      ++|++.+.||+|+||.||+|.+  .+..||+|++..  ........+    ++.+|+.+|+.++||||+++++++.....
T Consensus        29 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~--~~~~~~~~~----~~~~E~~~l~~l~hpnIv~~~~~~~~~~~  102 (367)
T 2fst_X           29 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR--PFQSIIHAK----RTYRELRLLKHMKHENVIGLLDVFTPARS  102 (367)
T ss_dssp             TTEEEEEECC----CCEEEEEETTTTEEEEEEECSS--TTSSHHHHH----HHHHHHHHHHHCCCTTBCCCSEEECSCSS
T ss_pred             CceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCc--cccCHHHHH----HHHHHHHHHHhCCCCCCCcEEEEEecCCc
Confidence            6899999999999999999987  577899998532  222223333    44899999999999999999999875422


Q ss_pred             CCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCCCcEEEec
Q 003185          583 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL  662 (840)
Q Consensus       583 ~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKPeNILLd~  662 (840)
                      .        ......|+||||+ +++|.+++..      ..+++..++.++.||+.||.|||++||+||||||+|||++.
T Consensus       103 ~--------~~~~~~~lv~e~~-~~~L~~~~~~------~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~  167 (367)
T 2fst_X          103 L--------EEFNDVYLVTHLM-GADLNNIVKC------QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE  167 (367)
T ss_dssp             G--------GGCCCCEEEEECC-CEECC-----------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECT
T ss_pred             c--------ccCCeEEEEeccc-CCCHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHhhEEECC
Confidence            1        1123469999999 5799999864      46999999999999999999999999999999999999987


Q ss_pred             ccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHHHHHHHHH
Q 003185          663 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL  742 (840)
Q Consensus       663 ~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLGvIL~ELL  742 (840)
                      +       +.+||+|||+++.....             ....+||+.|+|||++.+   ...++.++|||||||++|||+
T Consensus       168 ~-------~~~kL~DFG~a~~~~~~-------------~~~~~~t~~y~aPE~~~~---~~~~~~~~DiwslG~il~ell  224 (367)
T 2fst_X          168 D-------CELKILDFGLARHTADE-------------MTGYVATRWYRAPEIMLN---WMHYNQTVDIWSVGCIMAELL  224 (367)
T ss_dssp             T-------CCEEECC----------------------------CCCTTCCHHHHTT---CCSCCTTHHHHHHHHHHHHHH
T ss_pred             C-------CCEEEeecccccccccc-------------CCCcCcCcCccChHHHcC---CcCCCchhhHHHHHHHHHHHH
Confidence            7       46999999999765431             123469999999999875   346789999999999999999


Q ss_pred             hCCCCCCCCCHHHHHHHHHcCCCCCcchHHhhhccCccccccccCC---CCCCchhhhhhHHHHHHHHHHhcccCCCCCC
Q 003185          743 TLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGS---GFEKPEAELETLSFLVDVFRRCTEENPTERP  819 (840)
Q Consensus       743 TG~~PF~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~---~~~~~~~~~~~s~~L~dLI~rCL~~DP~eRP  819 (840)
                      +|+.||.+.+..+....+.........+.+..........+.+...   ...........++.+.+||.+||..||.+||
T Consensus       225 ~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~  304 (367)
T 2fst_X          225 TGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRI  304 (367)
T ss_dssp             HSSCSCCCSSHHHHHHHHHHHHCSCCHHHHTTCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSC
T ss_pred             hCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCc
Confidence            9999999998877777766542222222222111000000000000   1111122233467899999999999999999


Q ss_pred             CHHHHHHHHHh
Q 003185          820 TAGDLYEMFVA  830 (840)
Q Consensus       820 Sa~ELLehLe~  830 (840)
                      |+.++++|..-
T Consensus       305 t~~e~L~hp~~  315 (367)
T 2fst_X          305 TAAQALAHAYF  315 (367)
T ss_dssp             CHHHHHTSGGG
T ss_pred             CHHHHhcChhh
Confidence            99999998543


No 184
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00  E-value=1.2e-39  Score=343.01  Aligned_cols=264  Identities=22%  Similarity=0.277  Sum_probs=203.1

Q ss_pred             CCCceeeeeecccCceEEEEEEEC--CeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeEEecCC
Q 003185          504 FPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK  581 (840)
Q Consensus       504 ~~~y~i~~~LG~G~fG~Vy~a~~~--~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~l~g~~~~~~  581 (840)
                      ..+|++.+.||+|+||.||+|.+.  +..+|+|+.....        +.+    .+|+.++++++||||+++++++....
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--------~~~----~~e~~~l~~l~h~~i~~~~~~~~~~~   77 (284)
T 2a19_B           10 GMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN--------EKA----EREVKALAKLDHVNIVHYNGCWDGFD   77 (284)
T ss_dssp             HHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS--------GGG----HHHHHHHHHCCCTTBCCEEEEEEEEE
T ss_pred             ccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc--------HHH----HHHHHHHHhCCCCCEEEEeeeEeccc
Confidence            367999999999999999999984  7899999875431        123    78999999999999999999886422


Q ss_pred             CCCCCC--CCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCCCcEE
Q 003185          582 WLPSAD--GNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENIL  659 (840)
Q Consensus       582 ~~p~~~--g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKPeNIL  659 (840)
                      ..+...  ..........++||||+++++|.+++...   ....+++..++.++.||+.||.|||++||+||||||+|||
T Consensus        78 ~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil  154 (284)
T 2a19_B           78 YDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKR---RGEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIF  154 (284)
T ss_dssp             EC---------CCEEEEEEEEECCCCSCBHHHHHHHG---GGSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEE
T ss_pred             cCcccccccccccCcceEEEEEeccCCCCHHHHHhhc---cCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCHHHEE
Confidence            110000  00001233579999999999999999862   2246899999999999999999999999999999999999


Q ss_pred             EecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHHHHHH
Q 003185          660 IDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLL  739 (840)
Q Consensus       660 Ld~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLGvIL~  739 (840)
                      ++.+       +.+||+|||++........           .....||+.|+|||++.+    ..++.++|||||||++|
T Consensus       155 ~~~~-------~~~kl~Dfg~~~~~~~~~~-----------~~~~~~~~~y~aPE~~~~----~~~~~~~Di~slG~il~  212 (284)
T 2a19_B          155 LVDT-------KQVKIGDFGLVTSLKNDGK-----------RTRSKGTLRYMSPEQISS----QDYGKEVDLYALGLILA  212 (284)
T ss_dssp             EEET-------TEEEECCCTTCEESSCCSC-----------CCCCCSCCTTSCHHHHHC----SCCCTHHHHHHHHHHHH
T ss_pred             EcCC-------CCEEECcchhheecccccc-----------ccccCCcccccChhhhcc----CCCcchhhhHHHHHHHH
Confidence            9877       4699999999986643211           123468999999999986    56789999999999999


Q ss_pred             HHHhCCCCCCCCCHHHHHHHHHcCCCCCcchHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC
Q 003185          740 ELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP  819 (840)
Q Consensus       740 ELLTG~~PF~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L~dLI~rCL~~DP~eRP  819 (840)
                      +|++|..||...  ......+.....+                              ...+..+.+||.+||..||.+||
T Consensus       213 ~l~~~~~~~~~~--~~~~~~~~~~~~~------------------------------~~~~~~~~~li~~~l~~dp~~Rp  260 (284)
T 2a19_B          213 ELLHVCDTAFET--SKFFTDLRDGIIS------------------------------DIFDKKEKTLLQKLLSKKPEDRP  260 (284)
T ss_dssp             HHHSCCSSHHHH--HHHHHHHHTTCCC------------------------------TTSCHHHHHHHHHHTCSSGGGSC
T ss_pred             HHHhcCCcchhH--HHHHHHhhccccc------------------------------ccCCHHHHHHHHHHccCChhhCc
Confidence            999999887421  2222223222111                              01244689999999999999999


Q ss_pred             CHHHHHHHHHhhcCCCC
Q 003185          820 TAGDLYEMFVARTSSSI  836 (840)
Q Consensus       820 Sa~ELLehLe~l~~~~~  836 (840)
                      |+.+++++|+.+.....
T Consensus       261 s~~e~l~~l~~~~~~~~  277 (284)
T 2a19_B          261 NTSEILRTLTVWKKSPE  277 (284)
T ss_dssp             CHHHHHHHHHHHTC---
T ss_pred             CHHHHHHHHHHHhhCCC
Confidence            99999999999876543


No 185
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00  E-value=7e-40  Score=370.07  Aligned_cols=266  Identities=24%  Similarity=0.261  Sum_probs=210.8

Q ss_pred             CCCCCceeeeeecccCceEEEEEEE--CCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeEEec
Q 003185          502 GSFPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKIS  579 (840)
Q Consensus       502 ~~~~~y~i~~~LG~G~fG~Vy~a~~--~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~l~g~~~~  579 (840)
                      ...++|++.+.||+|+||.||+|+.  .+..||+|+.....     .........+.+|..++..++||||+++++++.+
T Consensus        58 ~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~-----~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~  132 (412)
T 2vd5_A           58 LQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWD-----MLKRGEVSCFREERDVLVNGDRRWITQLHFAFQD  132 (412)
T ss_dssp             CCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHH-----HHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEEC
T ss_pred             CChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHH-----hhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEee
Confidence            3467899999999999999999998  57899999975321     1111122345899999999999999999999986


Q ss_pred             CCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCCCcEE
Q 003185          580 SKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENIL  659 (840)
Q Consensus       580 ~~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKPeNIL  659 (840)
                      ...              +||||||++||+|.+++.+.    ...+++..++.++.||+.||.|||++|||||||||+|||
T Consensus       133 ~~~--------------~~lVmE~~~gg~L~~~l~~~----~~~l~~~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NIL  194 (412)
T 2vd5_A          133 ENY--------------LYLVMEYYVGGDLLTLLSKF----GERIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNIL  194 (412)
T ss_dssp             SSE--------------EEEEECCCCSCBHHHHHHHH----SSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEE
T ss_pred             CCE--------------EEEEEcCCCCCcHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccCHHHee
Confidence            653              59999999999999999862    246999999999999999999999999999999999999


Q ss_pred             EecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhccc---CCCCCCchhhHHHHHH
Q 003185          660 IDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMH---KPNLYGLEVDIWSYGC  736 (840)
Q Consensus       660 Ld~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~---~~~~~s~kSDVWSLGv  736 (840)
                      |+.+       +.+||+|||+++........         .....+||+.|+|||++....   ....++.++|||||||
T Consensus       195 ld~~-------g~vkL~DFGla~~~~~~~~~---------~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGv  258 (412)
T 2vd5_A          195 LDRC-------GHIRLADFGSCLKLRADGTV---------RSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGV  258 (412)
T ss_dssp             ECTT-------SCEEECCCTTCEECCTTSCE---------ECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHH
T ss_pred             ecCC-------CCEEEeechhheeccCCCcc---------ccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhH
Confidence            9877       46999999999876432211         112357999999999997321   1245789999999999


Q ss_pred             HHHHHHhCCCCCCCCCHHHHHHHHHcCC-CCCcchHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCC
Q 003185          737 LLLELLTLQVPYMGLSELEIHDLIQMGK-RPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENP  815 (840)
Q Consensus       737 IL~ELLTG~~PF~~~~~~el~~~I~~~~-~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L~dLI~rCL~~DP  815 (840)
                      ++|||++|+.||.+.+..++...|.... ...++.                        .....+..+.+||.+||. +|
T Consensus       259 ilyelltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~------------------------~~~~~s~~~~dli~~lL~-~p  313 (412)
T 2vd5_A          259 FAYEMFYGQTPFYADSTAETYGKIVHYKEHLSLPL------------------------VDEGVPEEARDFIQRLLC-PP  313 (412)
T ss_dssp             HHHHHHHSSCTTCCSSHHHHHHHHHTHHHHCCCC----------------------------CCCHHHHHHHHTTSS-CG
T ss_pred             HHHHHHhCCCCCCCCCHHHHHHHHHhcccCcCCCc------------------------cccCCCHHHHHHHHHHcC-Ch
Confidence            9999999999999998888877776421 111110                        011235689999999999 99


Q ss_pred             CCC---CCHHHHHHHHHhh
Q 003185          816 TER---PTAGDLYEMFVAR  831 (840)
Q Consensus       816 ~eR---PSa~ELLehLe~l  831 (840)
                      .+|   |++++|++|..-.
T Consensus       314 ~~Rlgr~~~~ei~~Hpff~  332 (412)
T 2vd5_A          314 ETRLGRGGAGDFRTHPFFF  332 (412)
T ss_dssp             GGCTTTTTHHHHHTSGGGT
T ss_pred             hhcCCCCCHHHHhcCCCcC
Confidence            998   5999999996543


No 186
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=3.3e-40  Score=363.45  Aligned_cols=261  Identities=22%  Similarity=0.270  Sum_probs=202.9

Q ss_pred             CCCCCceeeeeecccCceEEEEEEE-----CCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhC-CCCCcceeee
Q 003185          502 GSFPSLSSCDEAGKSVSSSLFRCKF-----GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEMYG  575 (840)
Q Consensus       502 ~~~~~y~i~~~LG~G~fG~Vy~a~~-----~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L-~HpNIV~l~g  575 (840)
                      ..+++|++.+.||+|+||.||+|+.     .+..||+|++............+.    +.+|+.+|+.+ +||||+++++
T Consensus        51 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~----~~~E~~~l~~l~~h~~iv~~~~  126 (355)
T 1vzo_A           51 VGIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEH----TRTERQVLEHIRQSPFLVTLHY  126 (355)
T ss_dssp             CCGGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGG----CCCHHHHHHHHHTCTTBCCEEE
T ss_pred             ccccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHH----HHHHHHHHHHccCCCceeEEEE
Confidence            5678999999999999999999997     678999999753321111111222    37899999999 6999999999


Q ss_pred             EEecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCC
Q 003185          576 HKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKS  655 (840)
Q Consensus       576 ~~~~~~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKP  655 (840)
                      ++.....              .+|||||+++++|.+++..     ...+++..++.++.||+.||.|||++||+||||||
T Consensus       127 ~~~~~~~--------------~~lv~e~~~~~~L~~~l~~-----~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp  187 (355)
T 1vzo_A          127 AFQTETK--------------LHLILDYINGGELFTHLSQ-----RERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKL  187 (355)
T ss_dssp             EEEETTE--------------EEEEECCCCSCBHHHHHHH-----HSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCG
T ss_pred             EEeeCce--------------EEEEeecCCCCCHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCH
Confidence            9986553              5999999999999999986     24689999999999999999999999999999999


Q ss_pred             CcEEEecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHH
Q 003185          656 ENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYG  735 (840)
Q Consensus       656 eNILLd~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLG  735 (840)
                      +||||+.+       +.+||+|||+++.+.......         .....||+.|+|||++.+.  ...++.++||||||
T Consensus       188 ~NIll~~~-------~~~kl~DfG~a~~~~~~~~~~---------~~~~~gt~~y~aPE~~~~~--~~~~~~~~DvwslG  249 (355)
T 1vzo_A          188 ENILLDSN-------GHVVLTDFGLSKEFVADETER---------AYDFCGTIEYMAPDIVRGG--DSGHDKAVDWWSLG  249 (355)
T ss_dssp             GGEEECTT-------SCEEESCSSEEEECCGGGGGG---------GCGGGSCCTTCCHHHHTTC--C---CTHHHHHHHH
T ss_pred             HHEEECCC-------CcEEEeeCCCCeecccCCCCc---------ccCcccCcCccChhhhcCC--CCCCCchhhHHHHH
Confidence            99999877       469999999998654322111         1234699999999999751  23578899999999


Q ss_pred             HHHHHHHhCCCCCCCCC----HHHHHHHHHcCCCCCcchHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhc
Q 003185          736 CLLLELLTLQVPYMGLS----ELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCT  811 (840)
Q Consensus       736 vIL~ELLTG~~PF~~~~----~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L~dLI~rCL  811 (840)
                      |+||||++|+.||....    ...+...+.... +.++                           ...+..+.+||.+||
T Consensus       250 ~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~-~~~~---------------------------~~~~~~~~~li~~~L  301 (355)
T 1vzo_A          250 VLMYELLTGASPFTVDGEKNSQAEISRRILKSE-PPYP---------------------------QEMSALAKDLIQRLL  301 (355)
T ss_dssp             HHHHHHHHSSCTTSCTTSCCCHHHHHHHHHHCC-CCCC---------------------------TTSCHHHHHHHHHHT
T ss_pred             HHHHHHHHCCCCCccCCccchHHHHHHHHhccC-CCCC---------------------------cccCHHHHHHHHHHh
Confidence            99999999999996432    333333333221 1111                           112457899999999


Q ss_pred             ccCCCCCC-----CHHHHHHHHHhh
Q 003185          812 EENPTERP-----TAGDLYEMFVAR  831 (840)
Q Consensus       812 ~~DP~eRP-----Sa~ELLehLe~l  831 (840)
                      ..||.+||     +++++++|+.-.
T Consensus       302 ~~dP~~R~~~~~~s~~ell~h~~f~  326 (355)
T 1vzo_A          302 MKDPKKRLGCGPRDADEIKEHLFFQ  326 (355)
T ss_dssp             CSSGGGSTTSSTTTHHHHHTSGGGT
T ss_pred             hhCHHHhcCCCCCCHHHHHcCcchh
Confidence            99999999     999999987543


No 187
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00  E-value=1.4e-40  Score=357.19  Aligned_cols=270  Identities=21%  Similarity=0.303  Sum_probs=209.6

Q ss_pred             CCCCCceeeeeecccCceEEEEEEECCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeEEecCC
Q 003185          502 GSFPSLSSCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK  581 (840)
Q Consensus       502 ~~~~~y~i~~~LG~G~fG~Vy~a~~~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~l~g~~~~~~  581 (840)
                      +.+++|++.+.||+|+||.||+|.+.+ .+|+|++.....  .....+.+    .+|+.++++++||||+++++++....
T Consensus        30 i~~~~~~~~~~lg~G~~g~V~~~~~~~-~~avk~~~~~~~--~~~~~~~~----~~e~~~l~~l~h~~iv~~~~~~~~~~  102 (319)
T 2y4i_B           30 IPFEQLEIGELIGKGRFGQVYHGRWHG-EVAIRLIDIERD--NEDQLKAF----KREVMAYRQTRHENVVLFMGACMSPP  102 (319)
T ss_dssp             SCCSCEECCCBCCCSSSSEEEEEEESS-SEEEEECCCCSC--CCCCCCCC----CTTGGGGTTCCCTTBCCCCEEEECSS
T ss_pred             CCHHHeEEeeEeccCCceEEEEEEEcC-eEEEEEeecCCC--CHHHHHHH----HHHHHHHhcCCCCCEeEEEEEEecCC
Confidence            678999999999999999999999876 588988654322  22222333    78999999999999999999998655


Q ss_pred             CCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCCCcEEEe
Q 003185          582 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID  661 (840)
Q Consensus       582 ~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKPeNILLd  661 (840)
                      .              .++||||+++++|.+++..    ....+++..++.++.||+.||.|||++||+||||||+|||++
T Consensus       103 ~--------------~~iv~e~~~~~~L~~~l~~----~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~NIl~~  164 (319)
T 2y4i_B          103 H--------------LAIITSLCKGRTLYSVVRD----AKIVLDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVFYD  164 (319)
T ss_dssp             C--------------EEEECBCCCSEEHHHHTTS----SCCCCCSHHHHHHHHHHHHHHHHHHHTTCCCCCCCSTTEEEC
T ss_pred             c--------------eEEEeecccCCcHHHHHHh----cCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChhhEEEe
Confidence            3              4999999999999999864    234689999999999999999999999999999999999997


Q ss_pred             cccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhccc-----CCCCCCchhhHHHHHH
Q 003185          662 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMH-----KPNLYGLEVDIWSYGC  736 (840)
Q Consensus       662 ~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~-----~~~~~s~kSDVWSLGv  736 (840)
                       +       +.+||+|||++.........     ..........||+.|+|||++.+..     ....++.++|||||||
T Consensus       165 -~-------~~~~l~Dfg~~~~~~~~~~~-----~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~  231 (319)
T 2y4i_B          165 -N-------GKVVITDFGLFSISGVLQAG-----RREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGT  231 (319)
T ss_dssp             ----------CCEECCCSCCC---------------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHH
T ss_pred             -C-------CCEEEeecCCcccccccccc-----ccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHH
Confidence             3       35999999998765322111     0111123345899999999997532     1245789999999999


Q ss_pred             HHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCcchHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCC
Q 003185          737 LLLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPT  816 (840)
Q Consensus       737 IL~ELLTG~~PF~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L~dLI~rCL~~DP~  816 (840)
                      ++|||++|..||.......+...+..+..+.+..                          ...+..+.+||.+||..||.
T Consensus       232 il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~l~~li~~~l~~~p~  285 (319)
T 2y4i_B          232 IWYELHAREWPFKTQPAEAIIWQMGTGMKPNLSQ--------------------------IGMGKEISDILLFCWAFEQE  285 (319)
T ss_dssp             HHHHHHHSSCSSSSCCHHHHHHHHHTTCCCCCCC--------------------------SSCCTTHHHHHHHHHCSSTT
T ss_pred             HHHHHHhCCCCCCCCCHHHHHHHhccCCCCCCCc--------------------------CCCCHHHHHHHHHHhcCChh
Confidence            9999999999999988888887777665443321                          01233689999999999999


Q ss_pred             CCCCHHHHHHHHHhhcCCC
Q 003185          817 ERPTAGDLYEMFVARTSSS  835 (840)
Q Consensus       817 eRPSa~ELLehLe~l~~~~  835 (840)
                      +|||+.+|++.|+.+....
T Consensus       286 ~Rpt~~~l~~~l~~l~~~~  304 (319)
T 2y4i_B          286 ERPTFTKLMDMLEKLPKRN  304 (319)
T ss_dssp             TSCCHHHHHHHHTTC----
T ss_pred             hCcCHHHHHHHHHHHHHhh
Confidence            9999999999999987653


No 188
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00  E-value=2.3e-39  Score=351.07  Aligned_cols=269  Identities=27%  Similarity=0.366  Sum_probs=208.1

Q ss_pred             CCceeeeeecccCceEEEEEEECCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHh--CCCCCcceeeeEEecCCC
Q 003185          505 PSLSSCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGA--LRHSCIVEMYGHKISSKW  582 (840)
Q Consensus       505 ~~y~i~~~LG~G~fG~Vy~a~~~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~--L~HpNIV~l~g~~~~~~~  582 (840)
                      ++|.+.+.||+|+||.||+|.+.+..||+|++...       ...    .+.+|+.++..  ++||||+++++++.....
T Consensus        42 ~~y~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~-------~~~----~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~  110 (342)
T 1b6c_B           42 RTIVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSR-------EER----SWFREAEIYQTVMLRHENILGFIAADNKDNG  110 (342)
T ss_dssp             HHCEEEEEEEEETTEEEEEEEETTEEEEEEEECGG-------GHH----HHHHHHHHHHHSCCCCTTBCCEEEEEECCCS
T ss_pred             ccEEEEeeecCCCCcEEEEEEEcCccEEEEEeCch-------hHH----HHHHHHHHHHHhhcCCCcEEEEEeeecccCC
Confidence            68999999999999999999999999999997422       122    23788888887  789999999999886541


Q ss_pred             CCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHH--------hCCeecccCC
Q 003185          583 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELH--------SKHIMHRDIK  654 (840)
Q Consensus       583 ~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLH--------s~gIVHRDLK  654 (840)
                                .....++||||+++|+|.+++..      ..+++..++.++.||+.||.|||        ++||+|||||
T Consensus       111 ----------~~~~~~lv~e~~~~g~L~~~l~~------~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlk  174 (342)
T 1b6c_B          111 ----------TWTQLWLVSDYHEHGSLFDYLNR------YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLK  174 (342)
T ss_dssp             ----------SCCCEEEEECCCTTCBHHHHHHH------CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCS
T ss_pred             ----------ccceeEEEEeecCCCcHHHHHhc------cCccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCC
Confidence                      11246999999999999999976      46899999999999999999999        8999999999


Q ss_pred             CCcEEEecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCC--CCCchhhHH
Q 003185          655 SENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPN--LYGLEVDIW  732 (840)
Q Consensus       655 PeNILLd~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~--~~s~kSDVW  732 (840)
                      |+||||+.+       +.+||+|||++............      ......||+.|+|||++.+.....  .++.++|||
T Consensus       175 p~NIll~~~-------~~~kL~Dfg~~~~~~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~  241 (342)
T 1b6c_B          175 SKNILVKKN-------GTCCIADLGLAVRHDSATDTIDI------APNHRVGTKRYMAPEVLDDSINMKHFESFKRADIY  241 (342)
T ss_dssp             GGGEEECTT-------SCEEECCCTTCEEEETTTTEEEE------CCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHH
T ss_pred             HHHEEECCC-------CCEEEEECCCceecccccccccc------ccccCCcCcccCCHhhhcccccccccccCCcccHH
Confidence            999999877       46999999999876543221100      123346999999999997621111  233789999


Q ss_pred             HHHHHHHHHHhC----------CCCCCCCC-----HHHHHHHHHcC-CCCCcchHHhhhccCccccccccCCCCCCchhh
Q 003185          733 SYGCLLLELLTL----------QVPYMGLS-----ELEIHDLIQMG-KRPRLTDELEALGSCHEHEVAQSGSGFEKPEAE  796 (840)
Q Consensus       733 SLGvIL~ELLTG----------~~PF~~~~-----~~el~~~I~~~-~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~  796 (840)
                      ||||+||||+||          ..||....     ...+...+... .++.++..+                      ..
T Consensus       242 slG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------~~  299 (342)
T 1b6c_B          242 AMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRW----------------------QS  299 (342)
T ss_dssp             HHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGG----------------------GT
T ss_pred             HHHHHHHHHHhccCcCCcccccccCccccCcCcccHHHHHHHHHHHHhCCCCcccc----------------------cc
Confidence            999999999999          78886542     23333333322 333333211                      11


Q ss_pred             hhhHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhcCCC
Q 003185          797 LETLSFLVDVFRRCTEENPTERPTAGDLYEMFVARTSSS  835 (840)
Q Consensus       797 ~~~s~~L~dLI~rCL~~DP~eRPSa~ELLehLe~l~~~~  835 (840)
                      ...+..+.+||.+||+.||.+|||+.+|+++|+.+....
T Consensus       300 ~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i~~~~  338 (342)
T 1b6c_B          300 CEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQE  338 (342)
T ss_dssp             SHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHHHHTT
T ss_pred             hhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHHh
Confidence            245678999999999999999999999999999987653


No 189
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00  E-value=4.7e-40  Score=359.84  Aligned_cols=285  Identities=13%  Similarity=0.085  Sum_probs=203.7

Q ss_pred             CCCCCceeeeeecccCceEEEEEEE-----CCeeEEEEEEecccCCCChHHHHHh----HHhHHHHHHHHHhCCCCCcce
Q 003185          502 GSFPSLSSCDEAGKSVSSSLFRCKF-----GSADAAAKVRTLKVCGSSADEIRNF----EYSCLGEVRMLGALRHSCIVE  572 (840)
Q Consensus       502 ~~~~~y~i~~~LG~G~fG~Vy~a~~-----~~~~vAVKI~~lk~~~~~~~~~~~f----~~~~~rEi~iL~~L~HpNIV~  572 (840)
                      ..-++|.+.+.||+|+||.||+|.+     .+..+|+|+....... ...+.+.+    ...+.+|+.+++.++||||++
T Consensus        34 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~-~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~  112 (345)
T 2v62_A           34 MEGNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGP-LFSELKFYQRVAKKDCIKKWIERKQLDYLGIPL  112 (345)
T ss_dssp             TTSCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CH-HHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCC
T ss_pred             ccCceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcc-hHHHHHHHHHHhhhHHHHHHHhhccccccCcce
Confidence            3446899999999999999999998     4578999987543210 01111111    124578999999999999999


Q ss_pred             eeeEEecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccc
Q 003185          573 MYGHKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRD  652 (840)
Q Consensus       573 l~g~~~~~~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRD  652 (840)
                      +++++.....          .....||||||+ +++|.+++..     ...+++..++.++.||+.||+|||++||+|||
T Consensus       113 ~~~~~~~~~~----------~~~~~~lv~e~~-~~~L~~~l~~-----~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~D  176 (345)
T 2v62_A          113 FYGSGLTEFK----------GRSYRFMVMERL-GIDLQKISGQ-----NGTFKKSTVLQLGIRMLDVLEYIHENEYVHGD  176 (345)
T ss_dssp             EEEEEEEESS----------SCEEEEEEEECE-EEEHHHHCBG-----GGBCCHHHHHHHHHHHHHHHHHHHHTTEECSC
T ss_pred             eecccccccC----------CCcEEEEEEecc-CCCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCC
Confidence            9999886321          123569999999 8999999865     23799999999999999999999999999999


Q ss_pred             CCCCcEEEecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHH
Q 003185          653 IKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIW  732 (840)
Q Consensus       653 LKPeNILLd~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVW  732 (840)
                      |||+|||++.++.     ..+||+|||+++.+........   ..........||+.|+|||++.+    ..++.++|||
T Consensus       177 lkp~NIll~~~~~-----~~~kL~Dfg~a~~~~~~~~~~~---~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~~Di~  244 (345)
T 2v62_A          177 IKAANLLLGYKNP-----DQVYLADYGLSYRYCPNGNHKQ---YQENPRKGHNGTIEFTSLDAHKG----VALSRRSDVE  244 (345)
T ss_dssp             CSGGGEEEESSST-----TSEEECCCTTCEESSGGGCCCC---CCCCGGGCSCSCTTTCCHHHHHT----CCCCHHHHHH
T ss_pred             cCHHHEEEccCCC-----CcEEEEeCCCceeccccccccc---chhccccccCCCccccCHHHhcC----CCCCchhhHH
Confidence            9999999987732     3799999999987654321100   00111134579999999999986    5789999999


Q ss_pred             HHHHHHHHHHhCCCCCCCC--CHHHHHHHHHcCCCCCcchHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHh
Q 003185          733 SYGCLLLELLTLQVPYMGL--SELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRC  810 (840)
Q Consensus       733 SLGvIL~ELLTG~~PF~~~--~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L~dLI~rC  810 (840)
                      ||||+||||++|+.||.+.  ...... .......+.++..+.....                  ....+..+.+||.+|
T Consensus       245 slG~il~ell~g~~pf~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~------------------~~~~~~~l~~li~~~  305 (345)
T 2v62_A          245 ILGYCMLRWLCGKLPWEQNLKDPVAVQ-TAKTNLLDELPQSVLKWAP------------------SGSSCCEIAQFLVCA  305 (345)
T ss_dssp             HHHHHHHHHHHSSCTTGGGTTCHHHHH-HHHHHHHHTTTHHHHHHSC------------------TTSCCHHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCCCccccccccHHHH-HHHHhhcccccHHHHhhcc------------------ccccHHHHHHHHHHH
Confidence            9999999999999999652  222222 2222211222222211100                  012356899999999


Q ss_pred             cccCCCCCCCHHHHHHHHHhhcCC
Q 003185          811 TEENPTERPTAGDLYEMFVARTSS  834 (840)
Q Consensus       811 L~~DP~eRPSa~ELLehLe~l~~~  834 (840)
                      |..||.+|||+.+|++.|+.+...
T Consensus       306 l~~dp~~Rps~~~l~~~L~~~~~~  329 (345)
T 2v62_A          306 HSLAYDEKPNYQALKKILNPHGIP  329 (345)
T ss_dssp             HTCCTTCCCCHHHHHHHHCTTCCC
T ss_pred             hhcCcccCCCHHHHHHHHhccCCc
Confidence            999999999999999999987643


No 190
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00  E-value=1.3e-39  Score=357.32  Aligned_cols=277  Identities=23%  Similarity=0.295  Sum_probs=206.1

Q ss_pred             CCCCCceeeeeecccCceEEEEEEEC--CeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeEEec
Q 003185          502 GSFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKIS  579 (840)
Q Consensus       502 ~~~~~y~i~~~LG~G~fG~Vy~a~~~--~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~l~g~~~~  579 (840)
                      ...++|++.+.||+|+||.||+|.+.  +..+|+|+.....   .....    ..+.+|+.++++++||||+++++++..
T Consensus        30 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~---~~~~~----~~~~~E~~~l~~l~h~~iv~~~~~~~~  102 (360)
T 3eqc_A           30 LKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI---KPAIR----NQIIRELQVLHECNSPYIVGFYGAFYS  102 (360)
T ss_dssp             CCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCC---CHHHH----HHHHHHHGGGGGCCCTTBCCEEEEEEE
T ss_pred             cccccceeeeeecCCCCeEEEEEEECCCCcEEEEEEecccc---CHHHH----HHHHHHHHHHHHCCCCCEEEEeEEEEE
Confidence            45678999999999999999999984  7889999976432   22222    345899999999999999999999986


Q ss_pred             CCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhC-CeecccCCCCcE
Q 003185          580 SKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSK-HIMHRDIKSENI  658 (840)
Q Consensus       580 ~~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~-gIVHRDLKPeNI  658 (840)
                      ...              .+|||||+++++|.+++..     ...+++..+..++.||+.||.|||++ ||+||||||+||
T Consensus       103 ~~~--------------~~lv~e~~~~~~L~~~l~~-----~~~~~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Ni  163 (360)
T 3eqc_A          103 DGE--------------ISICMEHMDGGSLDQVLKK-----AGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNI  163 (360)
T ss_dssp             TTE--------------EEEEECCCTTCBHHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGE
T ss_pred             CCE--------------EEEEEECCCCCCHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHhCCEEcCCccHHHE
Confidence            553              5999999999999999986     24689999999999999999999996 999999999999


Q ss_pred             EEecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHHHHH
Q 003185          659 LIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLL  738 (840)
Q Consensus       659 LLd~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLGvIL  738 (840)
                      |++.+       +.+||+|||++.......            .....||+.|+|||++.+    ..++.++|||||||++
T Consensus       164 l~~~~-------~~~kl~Dfg~~~~~~~~~------------~~~~~gt~~y~aPE~~~~----~~~~~~~Di~slG~il  220 (360)
T 3eqc_A          164 LVNSR-------GEIKLCDFGVSGQLIDSM------------ANSFVGTRSYMSPERLQG----THYSVQSDIWSMGLSL  220 (360)
T ss_dssp             EECTT-------CCEEECCCCCCHHHHHHC----------------CCCCTTCCHHHHTT----CCCSHHHHHHHHHHHH
T ss_pred             EECCC-------CCEEEEECCCCccccccc------------ccCCCCCCCeECHHHHcC----CCCCchhhHHHHHHHH
Confidence            99877       459999999997654321            123469999999999986    6789999999999999


Q ss_pred             HHHHhCCCCCCCCCHHHHHHHHHcCCCCCcchHHhhhccCcc-------------------ccccccCCCCCCchhhhhh
Q 003185          739 LELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHE-------------------HEVAQSGSGFEKPEAELET  799 (840)
Q Consensus       739 ~ELLTG~~PF~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~  799 (840)
                      |+|++|+.||...+..++...+....................                   ........   ........
T Consensus       221 ~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~  297 (360)
T 3eqc_A          221 VEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLNKFGMDSRPPMAIFELLDYIVNEPP---PKLPSGVF  297 (360)
T ss_dssp             HHHHHTSCCSSCCCHHHHHHHHC------------------------------CCCHHHHHHHHHHSCC---CCCCTTTS
T ss_pred             HHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCCCcccccccCCCCcccchhhhhHHhccCC---CCCCcccc
Confidence            999999999988876665443321110000000000000000                   00000000   00011224


Q ss_pred             HHHHHHHHHHhcccCCCCCCCHHHHHHHHHh
Q 003185          800 LSFLVDVFRRCTEENPTERPTAGDLYEMFVA  830 (840)
Q Consensus       800 s~~L~dLI~rCL~~DP~eRPSa~ELLehLe~  830 (840)
                      +..+.+||.+||..||.+|||+.++++|.+-
T Consensus       298 ~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~  328 (360)
T 3eqc_A          298 SLEFQDFVNKCLIKNPAERADLKQLMVHAFI  328 (360)
T ss_dssp             CHHHHHHHHHHHCSSTTTSCCHHHHHTSHHH
T ss_pred             cHHHHHHHHHHhhcChhhCCCHHHHhhChHh
Confidence            5689999999999999999999999998653


No 191
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00  E-value=1e-39  Score=345.72  Aligned_cols=270  Identities=17%  Similarity=0.157  Sum_probs=200.9

Q ss_pred             CCCCceeeeeecccCceEEEEEEE--CCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeEEecC
Q 003185          503 SFPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISS  580 (840)
Q Consensus       503 ~~~~y~i~~~LG~G~fG~Vy~a~~--~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~l~g~~~~~  580 (840)
                      .-++|++.+.||+|+||.||+|.+  .+..||+|+.......      .    .+.+|+.+++.++|++++..++.+...
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~------~----~~~~e~~~l~~l~~~~~i~~~~~~~~~   76 (296)
T 4hgt_A            7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH------P----QLHIESKIYKMMQGGVGIPTIRWCGAE   76 (296)
T ss_dssp             ----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC---C------C----CHHHHHHHHHHHTTSTTCCCEEEEEEE
T ss_pred             cCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccccc------h----HHHHHHHHHHHhcCCCCCCeeeeecCC
Confidence            346899999999999999999996  6789999986543211      1    238899999999999888888776543


Q ss_pred             CCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCCCcEEE
Q 003185          581 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILI  660 (840)
Q Consensus       581 ~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKPeNILL  660 (840)
                      ..             ..++||||+ +++|.+++..    ....+++..++.++.||+.||.|||++||+||||||+|||+
T Consensus        77 ~~-------------~~~lv~e~~-~~~L~~~~~~----~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~  138 (296)
T 4hgt_A           77 GD-------------YNVMVMELL-GPSLEDLFNF----CSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLM  138 (296)
T ss_dssp             TT-------------EEEEEEECC-CCBHHHHHHH----TTSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE
T ss_pred             CC-------------ceEEEEEcc-CCCHHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeee
Confidence            32             459999999 8899999975    23569999999999999999999999999999999999999


Q ss_pred             ecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHHHHHHH
Q 003185          661 DLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLE  740 (840)
Q Consensus       661 d~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLGvIL~E  740 (840)
                      +.+.    ..+.+||+|||+++..........   ..........||+.|+|||++.+    ..++.++|||||||++|+
T Consensus       139 ~~~~----~~~~~kL~Dfg~a~~~~~~~~~~~---~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~~Di~slG~il~~  207 (296)
T 4hgt_A          139 GLGK----KGNLVYIIDFGLAKKYRDARTHQH---IPYRENKNLTGTARYASINTHLG----IEQSRRDDLESLGYVLMY  207 (296)
T ss_dssp             CCGG----GTTCEEECCCTTCEECBCTTTCCB---CCCCCSCCCCSCGGGCCHHHHTT----CCCCHHHHHHHHHHHHHH
T ss_pred             eccC----CCCeEEEecCccceeccCcccCcc---CCCCcccccCCCccccchHHhcC----CCCCchhHHHHHHHHHHH
Confidence            4221    125699999999987654322110   01112234579999999999986    668999999999999999


Q ss_pred             HHhCCCCCCCCCHH---HHHHHHHcCCCCCcchHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCC
Q 003185          741 LLTLQVPYMGLSEL---EIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTE  817 (840)
Q Consensus       741 LLTG~~PF~~~~~~---el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L~dLI~rCL~~DP~e  817 (840)
                      |++|+.||.+....   +....+.....+...                       .......++.+.+||.+||+.||.+
T Consensus       208 l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~l~~li~~~l~~~p~~  264 (296)
T 4hgt_A          208 FNLGSLPWQGLKAATKRQKYERISEKKMSTPI-----------------------EVLCKGYPSEFATYLNFCRSLRFDD  264 (296)
T ss_dssp             HHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCH-----------------------HHHTTTSCHHHHHHHHHHHTSCTTC
T ss_pred             HhcCCCCCcccchhhhhhhhhhhhcccccchh-----------------------hhhhccCCHHHHHHHHHHHhcCCCC
Confidence            99999999765322   222222111000000                       0011123568999999999999999


Q ss_pred             CCCHHHHHHHHHhhcCC
Q 003185          818 RPTAGDLYEMFVARTSS  834 (840)
Q Consensus       818 RPSa~ELLehLe~l~~~  834 (840)
                      |||+.+|++.|+.+...
T Consensus       265 Rpt~~~l~~~l~~~~~~  281 (296)
T 4hgt_A          265 KPDYSYLRQLFRNLFHR  281 (296)
T ss_dssp             CCCHHHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHH
Confidence            99999999999987653


No 192
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00  E-value=6.7e-40  Score=349.15  Aligned_cols=260  Identities=28%  Similarity=0.430  Sum_probs=205.3

Q ss_pred             CCCCCceeeeeecccCceEEEEEEEC--CeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeEEec
Q 003185          502 GSFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKIS  579 (840)
Q Consensus       502 ~~~~~y~i~~~LG~G~fG~Vy~a~~~--~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~l~g~~~~  579 (840)
                      ...++|++.+.||+|+||.||+|.+.  +..+|+|++....    ....+    .+.+|+.+++.++||||+++++++..
T Consensus        16 ~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~----~~~~~----~~~~e~~~l~~l~h~~i~~~~~~~~~   87 (302)
T 2j7t_A           16 DPNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKS----EEELE----DYIVEIEILATCDHPYIVKLLGAYYH   87 (302)
T ss_dssp             CGGGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC--------CCHH----HHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred             CCccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCC----HHHHH----HHHHHHHHHhcCCCCCEeeeeeeeee
Confidence            45578999999999999999999984  7789999865331    11222    34899999999999999999999986


Q ss_pred             CCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCCCcEE
Q 003185          580 SKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENIL  659 (840)
Q Consensus       580 ~~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKPeNIL  659 (840)
                      ...              .++||||+++++|.+++...    ...+++..++.++.||+.||.|||++||+||||||+|||
T Consensus        88 ~~~--------------~~lv~e~~~~~~l~~~~~~~----~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil  149 (302)
T 2j7t_A           88 DGK--------------LWIMIEFCPGGAVDAIMLEL----DRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVL  149 (302)
T ss_dssp             C-C--------------EEEEEECCTTEEHHHHHHHH----TSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEE
T ss_pred             CCe--------------EEEEEEeCCCCcHHHHHHhh----ccCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEE
Confidence            553              49999999999999998752    356899999999999999999999999999999999999


Q ss_pred             EecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhccc-CCCCCCchhhHHHHHHHH
Q 003185          660 IDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMH-KPNLYGLEVDIWSYGCLL  738 (840)
Q Consensus       660 Ld~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~-~~~~~s~kSDVWSLGvIL  738 (840)
                      ++.+       +.+||+|||++.........          .....||+.|+|||++.... ....++.++|||||||++
T Consensus       150 ~~~~-------~~~kl~Dfg~~~~~~~~~~~----------~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il  212 (302)
T 2j7t_A          150 MTLE-------GDIRLADFGVSAKNLKTLQK----------RDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITL  212 (302)
T ss_dssp             ECTT-------SCEEECCCHHHHHHHHHHHC---------------CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHH
T ss_pred             ECCC-------CCEEEEECCCCccccccccc----------cccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHH
Confidence            9877       45999999988644321111          12346899999999985211 125678999999999999


Q ss_pred             HHHHhCCCCCCCCCHHHHHHHHHcCCCCCcchHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCC
Q 003185          739 LELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTER  818 (840)
Q Consensus       739 ~ELLTG~~PF~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L~dLI~rCL~~DP~eR  818 (840)
                      |+|++|..||...+.......+.....+.+..                         ....+..+.+||.+||..||.+|
T Consensus       213 ~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~l~~li~~~l~~dp~~R  267 (302)
T 2j7t_A          213 IEMAQIEPPHHELNPMRVLLKIAKSDPPTLLT-------------------------PSKWSVEFRDFLKIALDKNPETR  267 (302)
T ss_dssp             HHHHHSSCTTTTSCHHHHHHHHHHSCCCCCSS-------------------------GGGSCHHHHHHHHHHSCSCTTTS
T ss_pred             HHHhcCCCCCccCCHHHHHHHHhccCCcccCC-------------------------ccccCHHHHHHHHHHcccChhhC
Confidence            99999999999888877776666554332210                         11234578999999999999999


Q ss_pred             CCHHHHHHHHH
Q 003185          819 PTAGDLYEMFV  829 (840)
Q Consensus       819 PSa~ELLehLe  829 (840)
                      ||+.+|++|..
T Consensus       268 ps~~~ll~h~~  278 (302)
T 2j7t_A          268 PSAAQLLEHPF  278 (302)
T ss_dssp             CCHHHHTTSTT
T ss_pred             CCHHHHhcChH
Confidence            99999999854


No 193
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00  E-value=2.4e-39  Score=353.81  Aligned_cols=290  Identities=19%  Similarity=0.183  Sum_probs=201.8

Q ss_pred             CCCCCceeeeeecccCceEEEEEEE--CCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeEEec
Q 003185          502 GSFPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKIS  579 (840)
Q Consensus       502 ~~~~~y~i~~~LG~G~fG~Vy~a~~--~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~l~g~~~~  579 (840)
                      ..+++|++.+.||+|+||.||+|.+  .+..||+|++.......         ....+|+..+..++||||+++++++..
T Consensus        20 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~---------~~~~~~~~~l~~l~h~niv~~~~~~~~   90 (360)
T 3e3p_A           20 KEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFR---------NRELQIMQDLAVLHHPNIVQLQSYFYT   90 (360)
T ss_dssp             HHHTTEEEC----------CEEEEETTTCCEEEEEEEECCTTCC---------CHHHHHHHHHHHHCCTTBCCEEEEEEE
T ss_pred             hhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCcccc---------HHHHHHHHHHHhcCCCCcccHHHhhhc
Confidence            4678999999999999999999998  47789999874332111         122678888899999999999999875


Q ss_pred             CCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHH--hCCeecccCCCCc
Q 003185          580 SKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELH--SKHIMHRDIKSEN  657 (840)
Q Consensus       580 ~~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLH--s~gIVHRDLKPeN  657 (840)
                      ....       .......++||||+.+ +|...+..... ....+++..++.++.||+.||.|||  ++||+||||||+|
T Consensus        91 ~~~~-------~~~~~~~~lv~e~~~~-~l~~~~~~~~~-~~~~~~~~~~~~~~~qi~~al~~lH~~~~~ivH~Dlkp~N  161 (360)
T 3e3p_A           91 LGER-------DRRDIYLNVVMEYVPD-TLHRCCRNYYR-RQVAPPPILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHN  161 (360)
T ss_dssp             ECSS-------CTTCEEEEEEEECCSC-BHHHHHHHHHT-TTCCCCHHHHHHHHHHHHHHHHHHTSTTTCCBCSCCCGGG
T ss_pred             cccc-------cccceeEEEEeecccc-cHHHHHHHHhh-cccCCCHHHHHHHHHHHHHHHHHHhCCCCCeecCcCCHHH
Confidence            4321       1122346899999985 77766654332 2457899999999999999999999  9999999999999


Q ss_pred             EEEec-ccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHHH
Q 003185          658 ILIDL-ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGC  736 (840)
Q Consensus       658 ILLd~-~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLGv  736 (840)
                      |||+. +       +.+||+|||+++.......           .....||+.|+|||++.+   ...++.++|||||||
T Consensus       162 Ill~~~~-------~~~kl~Dfg~a~~~~~~~~-----------~~~~~gt~~y~aPE~~~~---~~~~~~~~Di~slG~  220 (360)
T 3e3p_A          162 VLVNEAD-------GTLKLCDFGSAKKLSPSEP-----------NVAYICSRYYRAPELIFG---NQHYTTAVDIWSVGC  220 (360)
T ss_dssp             EEEETTT-------TEEEECCCTTCBCCCTTSC-----------CCSTTSCGGGCCHHHHTT---CSSCCTHHHHHHHHH
T ss_pred             EEEeCCC-------CcEEEeeCCCceecCCCCC-----------cccccCCcceeCHHHHcC---CCCCCcHHHHHHHHH
Confidence            99986 4       5799999999986643221           123468999999999865   245799999999999


Q ss_pred             HHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCcchHHhhhccCccccccccCCCCC----CchhhhhhHHHHHHHHHHhcc
Q 003185          737 LLLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFE----KPEAELETLSFLVDVFRRCTE  812 (840)
Q Consensus       737 IL~ELLTG~~PF~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~----~~~~~~~~s~~L~dLI~rCL~  812 (840)
                      ++|+|++|+.||.+.+.......+.........+.+...................    ........+..+.+||.+||+
T Consensus       221 il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~  300 (360)
T 3e3p_A          221 IFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQ  300 (360)
T ss_dssp             HHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTC
T ss_pred             HHHHHHhCCCCcCCCChHHHHHHHHHHcCCCCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhc
Confidence            9999999999999988887777766542222222222211100000000000000    011112246789999999999


Q ss_pred             cCCCCCCCHHHHHHHHHh
Q 003185          813 ENPTERPTAGDLYEMFVA  830 (840)
Q Consensus       813 ~DP~eRPSa~ELLehLe~  830 (840)
                      .||.+|||+.|+++|.+-
T Consensus       301 ~dP~~Rpt~~e~l~hp~f  318 (360)
T 3e3p_A          301 YLPEERMKPYEALCHPYF  318 (360)
T ss_dssp             SSGGGSCCHHHHTTSGGG
T ss_pred             cCccccCCHHHHhcCccc
Confidence            999999999999999544


No 194
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00  E-value=2.1e-39  Score=349.68  Aligned_cols=248  Identities=25%  Similarity=0.256  Sum_probs=192.1

Q ss_pred             CCceeeeeecccCceEEEEEEE--CCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhC-CCCCcceeeeEEecCC
Q 003185          505 PSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEMYGHKISSK  581 (840)
Q Consensus       505 ~~y~i~~~LG~G~fG~Vy~a~~--~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L-~HpNIV~l~g~~~~~~  581 (840)
                      ++|++.++||+|+||+||+|.+  .+..||||+....  .........    ...|+..+.++ +||||+++++++....
T Consensus        57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~----~~~e~~~~~~~~~h~~iv~l~~~~~~~~  130 (311)
T 3p1a_A           57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSP--FRGPKDRAR----KLAEVGSHEKVGQHPCCVRLEQAWEEGG  130 (311)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSS--CCSHHHHHH----HHHHHHHHHHHCCCTTBCCEEEEEEETT
T ss_pred             hheeeeheeccCCCeEEEEEEECCCCeEEEEEEeccc--ccChHHHHH----HHHHHHHHHHhcCCCcEEEEEEEEEeCC
Confidence            6799999999999999999998  4788999985432  222222222    25666666555 8999999999998655


Q ss_pred             CCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCCCcEEEe
Q 003185          582 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID  661 (840)
Q Consensus       582 ~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKPeNILLd  661 (840)
                      .              .+|||||+ +++|.+++...    ...+++..++.++.||+.||.|||++||+||||||+|||++
T Consensus       131 ~--------------~~lv~e~~-~~~L~~~~~~~----~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~  191 (311)
T 3p1a_A          131 I--------------LYLQTELC-GPSLQQHCEAW----GASLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPANIFLG  191 (311)
T ss_dssp             E--------------EEEEEECC-CCBHHHHHHHH----CSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC
T ss_pred             E--------------EEEEEecc-CCCHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEC
Confidence            3              59999999 57999998762    35699999999999999999999999999999999999998


Q ss_pred             cccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHHHHHHHH
Q 003185          662 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL  741 (840)
Q Consensus       662 ~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLGvIL~EL  741 (840)
                      .+       +.+||+|||++........           .....||+.|+|||++.+     .++.++|||||||++|||
T Consensus       192 ~~-------~~~kl~DFG~a~~~~~~~~-----------~~~~~gt~~y~aPE~~~~-----~~~~~~DiwslG~il~el  248 (311)
T 3p1a_A          192 PR-------GRCKLGDFGLLVELGTAGA-----------GEVQEGDPRYMAPELLQG-----SYGTAADVFSLGLTILEV  248 (311)
T ss_dssp             GG-------GCEEECCCTTCEECC-----------------CCCCCGGGCCGGGGGT-----CCSTHHHHHHHHHHHHHH
T ss_pred             CC-------CCEEEccceeeeecccCCC-----------CcccCCCccccCHhHhcC-----CCCchhhHHHHHHHHHHH
Confidence            77       4599999999876543221           123469999999999874     578999999999999999


Q ss_pred             HhCCCCCCCCCHHHHHHHHHcCCCCCcchHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH
Q 003185          742 LTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA  821 (840)
Q Consensus       742 LTG~~PF~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L~dLI~rCL~~DP~eRPSa  821 (840)
                      ++|..||.+...   ...+.....   +.                       ......++.+.+||.+||+.||.+|||+
T Consensus       249 ~~g~~~~~~~~~---~~~~~~~~~---~~-----------------------~~~~~~~~~l~~li~~~L~~dP~~Rpt~  299 (311)
T 3p1a_A          249 ACNMELPHGGEG---WQQLRQGYL---PP-----------------------EFTAGLSSELRSVLVMMLEPDPKLRATA  299 (311)
T ss_dssp             HHTCCCCSSHHH---HHHHTTTCC---CH-----------------------HHHTTSCHHHHHHHHHHSCSSTTTSCCH
T ss_pred             HhCCCCCCCccH---HHHHhccCC---Cc-----------------------ccccCCCHHHHHHHHHHcCCChhhCcCH
Confidence            999777654322   223322211   11                       1112235689999999999999999999


Q ss_pred             HHHHHHHH
Q 003185          822 GDLYEMFV  829 (840)
Q Consensus       822 ~ELLehLe  829 (840)
                      .++++|.+
T Consensus       300 ~ell~hp~  307 (311)
T 3p1a_A          300 EALLALPV  307 (311)
T ss_dssp             HHHHTSGG
T ss_pred             HHHHhCcc
Confidence            99999864


No 195
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00  E-value=2e-39  Score=347.84  Aligned_cols=257  Identities=25%  Similarity=0.382  Sum_probs=203.5

Q ss_pred             CCCCCceeeeeecccCceEEEEEEEC--CeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeEEec
Q 003185          502 GSFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKIS  579 (840)
Q Consensus       502 ~~~~~y~i~~~LG~G~fG~Vy~a~~~--~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~l~g~~~~  579 (840)
                      ...++|++.+.||+|+||.||+|.+.  +..||+|++....      ..+    .+.+|+.++++++||||+++++++..
T Consensus        26 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~------~~~----~~~~e~~~l~~l~h~~i~~~~~~~~~   95 (314)
T 3com_A           26 QPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES------DLQ----EIIKEISIMQQCDSPHVVKYYGSYFK   95 (314)
T ss_dssp             ----CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS------CCH----HHHHHHHHHHTCCCTTBCCEEEEEEE
T ss_pred             cchhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH------HHH----HHHHHHHHHHhCCCCCCccEEEEEEe
Confidence            45678999999999999999999984  7889999875431      112    34889999999999999999999986


Q ss_pred             CCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCCCcEE
Q 003185          580 SKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENIL  659 (840)
Q Consensus       580 ~~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKPeNIL  659 (840)
                      ..              ..++||||+++++|.+++..    ....+++..++.++.||+.||.|||++||+|+||||+|||
T Consensus        96 ~~--------------~~~lv~e~~~~~~L~~~~~~----~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dl~p~Nil  157 (314)
T 3com_A           96 NT--------------DLWIVMEYCGAGSVSDIIRL----RNKTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNIL  157 (314)
T ss_dssp             TT--------------EEEEEEECCTTEEHHHHHHH----HTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEE
T ss_pred             CC--------------EEEEEeecCCCCCHHHHHHh----cCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCcCHHHEE
Confidence            55              35999999999999999974    1356899999999999999999999999999999999999


Q ss_pred             EecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHHHHHH
Q 003185          660 IDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLL  739 (840)
Q Consensus       660 Ld~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLGvIL~  739 (840)
                      ++.+       +.+||+|||++.........          .....||+.|+|||++.+    ..++.++||||||+++|
T Consensus       158 ~~~~-------~~~kl~dfg~~~~~~~~~~~----------~~~~~~~~~y~aPE~~~~----~~~~~~~Di~slG~il~  216 (314)
T 3com_A          158 LNTE-------GHAKLADFGVAGQLTDTMAK----------RNTVIGTPFWMAPEVIQE----IGYNCVADIWSLGITAI  216 (314)
T ss_dssp             ECTT-------CCEEECCCTTCEECBTTBSC----------BCCCCSCGGGCCHHHHSS----SCBCTTHHHHHHHHHHH
T ss_pred             ECCC-------CCEEEeecccchhhhhhccc----------cCccCCCCCccChhhcCC----CCCCccccHHHHHHHHH
Confidence            9877       45999999999766432211          123468999999999976    56889999999999999


Q ss_pred             HHHhCCCCCCCCCHHHHHHHHHcCCCCCcchHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC
Q 003185          740 ELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP  819 (840)
Q Consensus       740 ELLTG~~PF~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L~dLI~rCL~~DP~eRP  819 (840)
                      +|++|..||...........+.....+.+..                         ....+..+.+||.+||..||.+||
T Consensus       217 ~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~l~~li~~~l~~dp~~Rp  271 (314)
T 3com_A          217 EMAEGKPPYADIHPMRAIFMIPTNPPPTFRK-------------------------PELWSDNFTDFVKQCLVKSPEQRA  271 (314)
T ss_dssp             HHHHSSCTTTTSCHHHHHHHHHHSCCCCCSS-------------------------GGGSCHHHHHHHHHHTCSCTTTSC
T ss_pred             HHHhCCCCCCCCChHHHHHHHhcCCCcccCC-------------------------cccCCHHHHHHHHHHccCChhhCc
Confidence            9999999998887776665555443322210                         112345799999999999999999


Q ss_pred             CHHHHHHHHHhhc
Q 003185          820 TAGDLYEMFVART  832 (840)
Q Consensus       820 Sa~ELLehLe~l~  832 (840)
                      |+.++++|..-..
T Consensus       272 t~~~ll~~~~~~~  284 (314)
T 3com_A          272 TATQLLQHPFVRS  284 (314)
T ss_dssp             CHHHHTTSHHHHT
T ss_pred             CHHHHHhCHHHhc
Confidence            9999999865443


No 196
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00  E-value=1.3e-39  Score=364.11  Aligned_cols=283  Identities=22%  Similarity=0.241  Sum_probs=205.1

Q ss_pred             CCCceeeeeecccCceEEEEEEE-CCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeEEecCCC
Q 003185          504 FPSLSSCDEAGKSVSSSLFRCKF-GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW  582 (840)
Q Consensus       504 ~~~y~i~~~LG~G~fG~Vy~a~~-~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~l~g~~~~~~~  582 (840)
                      ..+|.+.+.||+|+||.||+|++ ....+|+|.+.....        ..    .+|+.+|+.++||||+++++++.....
T Consensus        39 ~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~--------~~----~~E~~il~~l~h~niv~l~~~~~~~~~  106 (394)
T 4e7w_A           39 EIAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKR--------FK----NRELQIMRIVKHPNVVDLKAFFYSNGD  106 (394)
T ss_dssp             EEEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTT--------SC----CHHHHHHHTCCCTTBCCEEEEEEEESS
T ss_pred             cceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcc--------hH----HHHHHHHHhCCCCCcceEEEEEEecCC
Confidence            45799999999999999999998 445577776542211        11    479999999999999999999975432


Q ss_pred             CCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCCCcEEEe-
Q 003185          583 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID-  661 (840)
Q Consensus       583 ~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKPeNILLd-  661 (840)
                      .        ......++||||+++ +|...+..... ....+++..++.++.||+.||.|||++||+||||||+||||+ 
T Consensus       107 ~--------~~~~~~~lv~e~~~~-~l~~~~~~~~~-~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~  176 (394)
T 4e7w_A          107 K--------KDEVFLNLVLEYVPE-TVYRASRHYAK-LKQTMPMLLIKLYMYQLLRSLAYIHSIGICHRDIKPQNLLLDP  176 (394)
T ss_dssp             S--------SSCEEEEEEEECCSE-EHHHHHHHHHH-TTSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEET
T ss_pred             C--------CCceEEEEEeeccCc-cHHHHHHHHHh-hcCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEcC
Confidence            1        122346899999986 66555543222 235799999999999999999999999999999999999998 


Q ss_pred             cccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHHHHHHHH
Q 003185          662 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL  741 (840)
Q Consensus       662 ~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLGvIL~EL  741 (840)
                      .+       +.+||+|||+++.......           .....||+.|+|||++.+   ...++.++|||||||+||||
T Consensus       177 ~~-------~~~kL~DFG~a~~~~~~~~-----------~~~~~~t~~y~aPE~~~~---~~~~~~~~DiwSlG~il~el  235 (394)
T 4e7w_A          177 PS-------GVLKLIDFGSAKILIAGEP-----------NVSYICSRYYRAPELIFG---ATNYTTNIDIWSTGCVMAEL  235 (394)
T ss_dssp             TT-------TEEEECCCTTCEECCTTCC-----------CCSSCSCGGGCCHHHHTT---CSSCCTHHHHHHHHHHHHHH
T ss_pred             CC-------CcEEEeeCCCcccccCCCC-----------CcccccCcCccCHHHHcC---CCCCCcHHHHHHHHHHHHHH
Confidence            44       5799999999987643211           123468999999999975   24589999999999999999


Q ss_pred             HhCCCCCCCCCHHHHHHHHHcCCCCCcchHHhhhcc-CccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCC
Q 003185          742 LTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGS-CHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPT  820 (840)
Q Consensus       742 LTG~~PF~~~~~~el~~~I~~~~~p~l~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~s~~L~dLI~rCL~~DP~eRPS  820 (840)
                      ++|+.||.+.+..+....+.+.......+.+..... .....+................++.+.+||.+||.+||.+|||
T Consensus       236 l~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t  315 (394)
T 4e7w_A          236 MQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLT  315 (394)
T ss_dssp             HHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCC
T ss_pred             HhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCC
Confidence            999999999887777666655422222222222110 0000000000000000011224678999999999999999999


Q ss_pred             HHHHHHHHH
Q 003185          821 AGDLYEMFV  829 (840)
Q Consensus       821 a~ELLehLe  829 (840)
                      +.|+++|..
T Consensus       316 ~~e~l~hp~  324 (394)
T 4e7w_A          316 AIEALCHPF  324 (394)
T ss_dssp             HHHHHTSGG
T ss_pred             HHHHhcChh
Confidence            999999944


No 197
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00  E-value=2e-39  Score=362.43  Aligned_cols=259  Identities=21%  Similarity=0.312  Sum_probs=197.8

Q ss_pred             CCceeeeeecccCceEEEEEEE-CCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCC--CCCcceeeeEEecCC
Q 003185          505 PSLSSCDEAGKSVSSSLFRCKF-GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALR--HSCIVEMYGHKISSK  581 (840)
Q Consensus       505 ~~y~i~~~LG~G~fG~Vy~a~~-~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~--HpNIV~l~g~~~~~~  581 (840)
                      ..|++.+.||+|+||.||+|.+ .+..||+|++....  ......+.    +.+|+.+|++|+  |||||++++++....
T Consensus        56 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~--~~~~~~~~----~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~  129 (390)
T 2zmd_A           56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEE--ADNQTLDS----YRNEIAYLNKLQQHSDKIIRLYDYEITDQ  129 (390)
T ss_dssp             EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTT--CCHHHHHH----HHHHHHHHHHHTTTCTTBCCEEEEEECSS
T ss_pred             CceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEeccc--ccHHHHHH----HHHHHHHHHHcccCCCeEEEEEEEEecCC
Confidence            4599999999999999999987 46789999976543  23333333    499999999997  599999999988655


Q ss_pred             CCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCCCcEEEe
Q 003185          582 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID  661 (840)
Q Consensus       582 ~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKPeNILLd  661 (840)
                      .              .||||| +.+++|.+++..     ...+++..++.++.||+.||.|||++||+||||||+||||+
T Consensus       130 ~--------------~~lv~E-~~~~~L~~~l~~-----~~~~~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~  189 (390)
T 2zmd_A          130 Y--------------IYMVME-CGNIDLNSWLKK-----KKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV  189 (390)
T ss_dssp             E--------------EEEEEE-CCSEEHHHHHHH-----CSSCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCCGGGEEES
T ss_pred             E--------------EEEEEe-cCCCCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEEE
Confidence            3              599999 457899999986     35789999999999999999999999999999999999995


Q ss_pred             cccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccC-------CCCCCchhhHHHH
Q 003185          662 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHK-------PNLYGLEVDIWSY  734 (840)
Q Consensus       662 ~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~-------~~~~s~kSDVWSL  734 (840)
                      .        +.+||+|||+++.+......        ......+||+.|+|||++.+...       ...++.++|||||
T Consensus       190 ~--------~~~kl~DFG~a~~~~~~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSl  253 (390)
T 2zmd_A          190 D--------GMLKLIDFGIANQMQPDTTS--------VVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSL  253 (390)
T ss_dssp             S--------SCEEECCCSSSCCC-----------------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHH
T ss_pred             C--------CeEEEEecCccccccCCCcc--------ccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHH
Confidence            3        35999999999876432211        01233569999999999975211       1368999999999


Q ss_pred             HHHHHHHHhCCCCCCCCC-HHHHHHHHHcC-CCCCcchHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcc
Q 003185          735 GCLLLELLTLQVPYMGLS-ELEIHDLIQMG-KRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTE  812 (840)
Q Consensus       735 GvIL~ELLTG~~PF~~~~-~~el~~~I~~~-~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L~dLI~rCL~  812 (840)
                      ||+||||++|+.||.... .......+... ....++.                           ..+..+.+||.+||.
T Consensus       254 Gvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~li~~~L~  306 (390)
T 2zmd_A          254 GCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPD---------------------------IPEKDLQDVLKCCLK  306 (390)
T ss_dssp             HHHHHHHHHSSCTTTTCCCHHHHHHHHHCTTSCCCCCC---------------------------CSCHHHHHHHHHHTC
T ss_pred             HHHHHHHHHCCCcchhhhHHHHHHHHHhCccccCCCCc---------------------------cchHHHHHHHHHHcc
Confidence            999999999999997653 33334343332 1111110                           013478999999999


Q ss_pred             cCCCCCCCHHHHHHHHHhhc
Q 003185          813 ENPTERPTAGDLYEMFVART  832 (840)
Q Consensus       813 ~DP~eRPSa~ELLehLe~l~  832 (840)
                      .||.+|||+.+|++|.+-..
T Consensus       307 ~dP~~Rps~~ell~hp~~~~  326 (390)
T 2zmd_A          307 RDPKQRISIPELLAHPYVQI  326 (390)
T ss_dssp             SSTTTSCCHHHHHTSHHHHS
T ss_pred             cChhhCCCHHHHhhCcCccc
Confidence            99999999999999976543


No 198
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00  E-value=6.9e-40  Score=367.63  Aligned_cols=263  Identities=24%  Similarity=0.256  Sum_probs=196.0

Q ss_pred             CCCCCceee-eeecccCceEEEEEEE--CCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHH-hCCCCCcceeeeEE
Q 003185          502 GSFPSLSSC-DEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLG-ALRHSCIVEMYGHK  577 (840)
Q Consensus       502 ~~~~~y~i~-~~LG~G~fG~Vy~a~~--~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~-~L~HpNIV~l~g~~  577 (840)
                      ..+++|.+. +.||+|+||.||+|.+  .+..||+|++...         ..    +.+|+.++. .++||||+++++++
T Consensus        58 ~~~~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~---------~~----~~~E~~~~~~~~~hp~iv~l~~~~  124 (400)
T 1nxk_A           58 AIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC---------PK----ARREVELHWRASQCPHIVRIVDVY  124 (400)
T ss_dssp             CGGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS---------HH----HHHHHHHHHHHTTSTTBCCEEEEE
T ss_pred             cccccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcc---------hh----HHHHHHHHHHhcCCCCcceEeEEE
Confidence            346778887 7899999999999998  4778999986411         12    277888874 45799999999998


Q ss_pred             ecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCCCc
Q 003185          578 ISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSEN  657 (840)
Q Consensus       578 ~~~~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKPeN  657 (840)
                      .....          .....||||||++||+|.+++..   .....+++..++.|+.||+.||.|||++||+||||||+|
T Consensus       125 ~~~~~----------~~~~~~lv~E~~~gg~L~~~l~~---~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~N  191 (400)
T 1nxk_A          125 ENLYA----------GRKCLLIVMECLDGGELFSRIQD---RGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPEN  191 (400)
T ss_dssp             EEEET----------TEEEEEEEEECCCSEEHHHHHHC---C---CCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGG
T ss_pred             eeccc----------CCcEEEEEEEeCCCCcHHHHHHH---hCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCcCcce
Confidence            64210          12246999999999999999975   223469999999999999999999999999999999999


Q ss_pred             EEEecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHHHH
Q 003185          658 ILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCL  737 (840)
Q Consensus       658 ILLd~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLGvI  737 (840)
                      ||++..+    ..+.+||+|||+++.......           .....||+.|+|||++.+    ..++.++|||||||+
T Consensus       192 ill~~~~----~~~~~kl~DFG~a~~~~~~~~-----------~~~~~gt~~y~aPE~~~~----~~~~~~~DiwslG~i  252 (400)
T 1nxk_A          192 LLYTSKR----PNAILKLTDFGFAKETTSHNS-----------LTTPCYTPYYVAPEVLGP----EKYDKSCDMWSLGVI  252 (400)
T ss_dssp             EEESSSS----TTCCEEECCCTTCEECC----------------------CTTCCGGGSCC----CCSSSHHHHHHHHHH
T ss_pred             EEEecCC----CCccEEEEecccccccCCCCc-----------cccCCCCCCccCHhhcCC----CCCCCcccHHHHHHH
Confidence            9998742    136799999999986543211           123468999999999875    678999999999999


Q ss_pred             HHHHHhCCCCCCCCCHHH----HHHHHHcCCCCCcchHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhccc
Q 003185          738 LLELLTLQVPYMGLSELE----IHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEE  813 (840)
Q Consensus       738 L~ELLTG~~PF~~~~~~e----l~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L~dLI~rCL~~  813 (840)
                      ||||++|..||.+.....    +...+..+... ++                       .......+..+.+||.+||..
T Consensus       253 l~ell~g~~pf~~~~~~~~~~~~~~~i~~~~~~-~~-----------------------~~~~~~~s~~~~~li~~~L~~  308 (400)
T 1nxk_A          253 MYILLCGYPPFYSNHGLAISPGMKTRIRMGQYE-FP-----------------------NPEWSEVSEEVKMLIRNLLKT  308 (400)
T ss_dssp             HHHHHHSSCSCCCCTTCSSCCSHHHHHHHTCCC-CC-----------------------TTTTTTSCHHHHHHHHTTSCS
T ss_pred             HHHHHhCCCCCCCCccccccHHHHHHHHcCccc-CC-----------------------CcccccCCHHHHHHHHHHCCC
Confidence            999999999997654321    23333333211 00                       001122356799999999999


Q ss_pred             CCCCCCCHHHHHHHHHhhcC
Q 003185          814 NPTERPTAGDLYEMFVARTS  833 (840)
Q Consensus       814 DP~eRPSa~ELLehLe~l~~  833 (840)
                      ||.+|||+.+|++|.+-...
T Consensus       309 dP~~Rpt~~eil~hp~~~~~  328 (400)
T 1nxk_A          309 EPTQRMTITEFMNHPWIMQS  328 (400)
T ss_dssp             SGGGSCCHHHHHHSHHHHTT
T ss_pred             ChhHCcCHHHHhcCccccCC
Confidence            99999999999999776543


No 199
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00  E-value=2.2e-39  Score=355.26  Aligned_cols=291  Identities=16%  Similarity=0.164  Sum_probs=206.8

Q ss_pred             CCCCceeeeeecccCceEEEEEEE-CCeeEEEEEEecccCCCCh---HHHHHhHHhHHHHHHHHHhCCCCCcceeeeEEe
Q 003185          503 SFPSLSSCDEAGKSVSSSLFRCKF-GSADAAAKVRTLKVCGSSA---DEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKI  578 (840)
Q Consensus       503 ~~~~y~i~~~LG~G~fG~Vy~a~~-~~~~vAVKI~~lk~~~~~~---~~~~~f~~~~~rEi~iL~~L~HpNIV~l~g~~~  578 (840)
                      ..++|++.+.||+|+||.||+|.+ .+..||+|++.........   .....+.+.+.+|+.++++++||||+++++++.
T Consensus        20 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~   99 (362)
T 3pg1_A           20 MQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFV   99 (362)
T ss_dssp             TTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEEE
T ss_pred             hccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccceeeeEE
Confidence            346899999999999999999986 5778999987543322111   111222345699999999999999999999987


Q ss_pred             cCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCCCcE
Q 003185          579 SSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENI  658 (840)
Q Consensus       579 ~~~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKPeNI  658 (840)
                      .....         .....|+||||+. |+|.+++..    ....+++..++.++.||+.||.|||++||+||||||+||
T Consensus       100 ~~~~~---------~~~~~~lv~e~~~-~~l~~~~~~----~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NI  165 (362)
T 3pg1_A          100 HFEEP---------AMHKLYLVTELMR-TDLAQVIHD----QRIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNI  165 (362)
T ss_dssp             ECCTT---------TCCEEEEEEECCS-EEHHHHHHC----TTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGE
T ss_pred             eccCC---------CcceEEEEEccCC-CCHHHHHHh----cccCCCHHHHHHHHHHHHHHHHHHHHCcCEecCCChHHE
Confidence            54321         2335799999998 699988874    335699999999999999999999999999999999999


Q ss_pred             EEecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHHHHH
Q 003185          659 LIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLL  738 (840)
Q Consensus       659 LLd~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLGvIL  738 (840)
                      |++.+       +.+||+|||++........           .....||+.|+|||++.+   ...++.++|||||||++
T Consensus       166 l~~~~-------~~~kl~Dfg~~~~~~~~~~-----------~~~~~~t~~y~aPE~~~~---~~~~~~~~DiwslG~il  224 (362)
T 3pg1_A          166 LLADN-------NDITICDFNLAREDTADAN-----------KTHYVTHRWYRAPELVMQ---FKGFTKLVDMWSAGCVM  224 (362)
T ss_dssp             EECTT-------CCEEECCTTC--------------------------CGGGCCHHHHTT---CTTCCTHHHHHHHHHHH
T ss_pred             EEcCC-------CCEEEEecCcccccccccc-----------cceecccceecCcHHhcC---CCCCCcHhHHHhHHHHH
Confidence            99877       4599999999975433211           123468999999999875   24578999999999999


Q ss_pred             HHHHhCCCCCCCCCHHHHHHHHHcC-CCCCcchHHhhhccCcccccc-c---cCCCCCCchhhhhhHHHHHHHHHHhccc
Q 003185          739 LELLTLQVPYMGLSELEIHDLIQMG-KRPRLTDELEALGSCHEHEVA-Q---SGSGFEKPEAELETLSFLVDVFRRCTEE  813 (840)
Q Consensus       739 ~ELLTG~~PF~~~~~~el~~~I~~~-~~p~l~~~l~~~~~~~~~~~~-~---~~~~~~~~~~~~~~s~~L~dLI~rCL~~  813 (840)
                      |+|++|+.||.+.+..+....+... ..+...... ........... .   ..............++.+.+||.+||+.
T Consensus       225 ~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~  303 (362)
T 3pg1_A          225 AEMFNRKALFRGSTFYNQLNKIVEVVGTPKIEDVV-MFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEF  303 (362)
T ss_dssp             HHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHH-HTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCS
T ss_pred             HHHHhCCCCCCCCCHHHHHHHHHHHcCCCChHHhh-hccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcC
Confidence            9999999999998877777666543 333222111 10000000000 0   0000011122233467799999999999


Q ss_pred             CCCCCCCHHHHHHHHH
Q 003185          814 NPTERPTAGDLYEMFV  829 (840)
Q Consensus       814 DP~eRPSa~ELLehLe  829 (840)
                      ||.+|||+.++++|..
T Consensus       304 dP~~Rpt~~ell~hp~  319 (362)
T 3pg1_A          304 NPQRRISTEQALRHPY  319 (362)
T ss_dssp             SGGGSCCHHHHHTSGG
T ss_pred             ChhhCCCHHHHHcCch
Confidence            9999999999999854


No 200
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00  E-value=3.7e-40  Score=350.25  Aligned_cols=274  Identities=24%  Similarity=0.345  Sum_probs=194.0

Q ss_pred             CCCCCceeeeeecccCceEEEEEEE--CCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeEEec
Q 003185          502 GSFPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKIS  579 (840)
Q Consensus       502 ~~~~~y~i~~~LG~G~fG~Vy~a~~--~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~l~g~~~~  579 (840)
                      +..++|++.+.||+|+||.||+|.+  .+..||+|++.....   ....    ..+.+|+.++++++||||+++++++..
T Consensus        12 i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~---~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~   84 (303)
T 2vwi_A           12 INRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKC---QTSM----DELLKEIQAMSQCHHPNIVSYYTSFVV   84 (303)
T ss_dssp             -CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC-----------------------CCCCCCCTTBCCEEEEEES
T ss_pred             cchhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhc---chhH----HHHHHHHHHHhhcCCCCEeeEEEEEee
Confidence            5678999999999999999999986  677899998643321   1112    234899999999999999999999986


Q ss_pred             CCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhcc---CCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCCC
Q 003185          580 SKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSET---GEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSE  656 (840)
Q Consensus       580 ~~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~---~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKPe  656 (840)
                      ...              .++||||+++++|.+++......   ....+++..++.++.||+.||.|||++||+||||||+
T Consensus        85 ~~~--------------~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~  150 (303)
T 2vwi_A           85 KDE--------------LWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAG  150 (303)
T ss_dssp             SSC--------------EEEEEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGG
T ss_pred             cCC--------------cEEEehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCCChh
Confidence            653              49999999999999999754322   2356899999999999999999999999999999999


Q ss_pred             cEEEecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHHH
Q 003185          657 NILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGC  736 (840)
Q Consensus       657 NILLd~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLGv  736 (840)
                      |||++.+       +.+||+|||++..........     .........||+.|+|||++.+.   ..++.++|||||||
T Consensus       151 Nil~~~~-------~~~kl~dfg~~~~~~~~~~~~-----~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~~Di~slG~  215 (303)
T 2vwi_A          151 NILLGED-------GSVQIADFGVSAFLATGGDIT-----RNKVRKTFVGTPCWMAPEVMEQV---RGYDFKADIWSFGI  215 (303)
T ss_dssp             GEEECTT-------CCEEECCCHHHHHCC--------------------CCCTTCCHHHHHHH---HCCCTHHHHHHHHH
T ss_pred             hEEEcCC-------CCEEEEeccchheeccCCCcc-----chhhhcccCCCccccCHHHhccc---cCCCchhhHHHHHH
Confidence            9999877       459999999987654321110     00112334699999999998741   34688999999999


Q ss_pred             HHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCcchHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCC
Q 003185          737 LLLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPT  816 (840)
Q Consensus       737 IL~ELLTG~~PF~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L~dLI~rCL~~DP~  816 (840)
                      ++|+|++|..||.................+.+......                  .......+..+.+||.+||..||.
T Consensus       216 il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~li~~~l~~dp~  277 (303)
T 2vwi_A          216 TAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQD------------------KEMLKKYGKSFRKMISLCLQKDPE  277 (303)
T ss_dssp             HHHHHHHSSCTTTTSCGGGHHHHHHTSSCCCTTC-----------------------CCCCCCCHHHHHHHHHHCCSSGG
T ss_pred             HHHHHHhCCCCCccCchhhHHHHHhccCCCcccccccc------------------chhhhhhhHHHHHHHHHHccCChh
Confidence            99999999999988776665555544433322211100                  001112356789999999999999


Q ss_pred             CCCCHHHHHHHHH
Q 003185          817 ERPTAGDLYEMFV  829 (840)
Q Consensus       817 eRPSa~ELLehLe  829 (840)
                      +|||+.++++|..
T Consensus       278 ~Rps~~~ll~h~~  290 (303)
T 2vwi_A          278 KRPTAAELLRHKF  290 (303)
T ss_dssp             GSCCHHHHHTSTT
T ss_pred             hCcCHHHHhhChh
Confidence            9999999999854


No 201
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00  E-value=5.3e-39  Score=340.73  Aligned_cols=270  Identities=17%  Similarity=0.160  Sum_probs=205.0

Q ss_pred             CCCCceeeeeecccCceEEEEEEE--CCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeEEecC
Q 003185          503 SFPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISS  580 (840)
Q Consensus       503 ~~~~y~i~~~LG~G~fG~Vy~a~~--~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~l~g~~~~~  580 (840)
                      .-++|++.+.||+|+||.||+|.+  .+..||+|+.......      .    .+.+|+.+++.++|++++..+.++...
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~------~----~~~~e~~~l~~l~~~~~i~~~~~~~~~   76 (296)
T 3uzp_A            7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH------P----QLHIESKIYKMMQGGVGIPTIRWCGAE   76 (296)
T ss_dssp             ETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSSC------C----HHHHHHHHHHHHTTSTTCCCEEEEEEE
T ss_pred             eccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcch------h----HHHHHHHHHHHhhcCCCCCccccccCC
Confidence            457899999999999999999996  6889999987543211      1    238899999999999888777766543


Q ss_pred             CCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCCCcEEE
Q 003185          581 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILI  660 (840)
Q Consensus       581 ~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKPeNILL  660 (840)
                      ..             ..++||||+ +++|.+++..    ....+++..++.++.||+.||.|||++||+||||||+|||+
T Consensus        77 ~~-------------~~~lv~e~~-~~~L~~~~~~----~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~  138 (296)
T 3uzp_A           77 GD-------------YNVMVMELL-GPSLEDLFNF----CSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLM  138 (296)
T ss_dssp             TT-------------EEEEEEECC-CCBHHHHHHH----TTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEE
T ss_pred             CC-------------ceEEEEEec-CCCHHHHHHh----hccCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHeEE
Confidence            32             459999999 8899999975    23569999999999999999999999999999999999999


Q ss_pred             ecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHHHHHHH
Q 003185          661 DLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLE  740 (840)
Q Consensus       661 d~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLGvIL~E  740 (840)
                      +.+.    ..+.+||+|||++...........   ..........||+.|+|||++.+    ..++.++|||||||++|+
T Consensus       139 ~~~~----~~~~~kl~Dfg~~~~~~~~~~~~~---~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~~Di~slG~il~~  207 (296)
T 3uzp_A          139 GLGK----KGNLVYIIDFGLAKKYRDARTHQH---IPYRENKNLTGTARYASINTHLG----IEQSRRDDLESLGYVLMY  207 (296)
T ss_dssp             CCGG----GTTCEEECCCTTCEECBCTTTCCB---CCCCCSCCCCSCTTTCCHHHHTT----CCCCHHHHHHHHHHHHHH
T ss_pred             ecCC----CCCeEEEeeCCCcccccccccccc---cccccccccccccccCChhhhcC----CCCCcchhhHHHHHHHHH
Confidence            5221    125699999999987654322110   01112244579999999999986    668999999999999999


Q ss_pred             HHhCCCCCCCCCH---HHHHHHHHcCCCCCcchHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCC
Q 003185          741 LLTLQVPYMGLSE---LEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTE  817 (840)
Q Consensus       741 LLTG~~PF~~~~~---~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L~dLI~rCL~~DP~e  817 (840)
                      |++|+.||.+...   .+....+..........                       ......++.+.+||.+||+.||.+
T Consensus       208 l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~l~~li~~~l~~dp~~  264 (296)
T 3uzp_A          208 FNLGSLPWQGLKAATKRQKYERISEKKMSTPIE-----------------------VLCKGYPSEFATYLNFCRSLRFDD  264 (296)
T ss_dssp             HHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCHH-----------------------HHTTTSCHHHHHHHHHHHTSCTTC
T ss_pred             HHhCCCCCCCcCchhhhhhhhhhcccccCCchH-----------------------HHHhhCCHHHHHHHHHHHhcCcCc
Confidence            9999999976432   22222222211000000                       011223567999999999999999


Q ss_pred             CCCHHHHHHHHHhhcCC
Q 003185          818 RPTAGDLYEMFVARTSS  834 (840)
Q Consensus       818 RPSa~ELLehLe~l~~~  834 (840)
                      |||+.+|++.|+.+...
T Consensus       265 Rps~~~l~~~l~~~~~~  281 (296)
T 3uzp_A          265 KPDYSYLRQLFRNLFHR  281 (296)
T ss_dssp             CCCHHHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHh
Confidence            99999999999987644


No 202
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00  E-value=2.2e-39  Score=348.94  Aligned_cols=285  Identities=22%  Similarity=0.243  Sum_probs=207.9

Q ss_pred             CCCCceeeeeecccCceEEEEEEE---CCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhC---CCCCcceeeeE
Q 003185          503 SFPSLSSCDEAGKSVSSSLFRCKF---GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL---RHSCIVEMYGH  576 (840)
Q Consensus       503 ~~~~y~i~~~LG~G~fG~Vy~a~~---~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L---~HpNIV~l~g~  576 (840)
                      .-++|++.+.||+|+||.||+|.+   ++..||+|++........  ..    ..+.+|+.+++.+   +||||++++++
T Consensus         9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~--~~----~~~~~e~~~l~~l~~~~h~~i~~~~~~   82 (326)
T 1blx_A            9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEG--MP----LSTIREVAVLRHLETFEHPNVVRLFDV   82 (326)
T ss_dssp             GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTS--CB----CTHHHHHHHHHHHHHTCCTTBCCEEEE
T ss_pred             chhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCccccc--CC----chhhHHHHHHHhhhccCCCCeEeeeee
Confidence            347899999999999999999997   467899999765432211  11    1236777777666   89999999999


Q ss_pred             EecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCCC
Q 003185          577 KISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSE  656 (840)
Q Consensus       577 ~~~~~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKPe  656 (840)
                      +......         .....++||||+. |+|.+++..   .....+++..++.++.||+.||.|||++||+||||||+
T Consensus        83 ~~~~~~~---------~~~~~~lv~e~~~-~~L~~~l~~---~~~~~~~~~~~~~~~~qi~~~l~~lH~~gi~H~dlkp~  149 (326)
T 1blx_A           83 CTVSRTD---------RETKLTLVFEHVD-QDLTTYLDK---VPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQ  149 (326)
T ss_dssp             EEEEECS---------SEEEEEEEEECCS-CBHHHHHHH---SCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGG
T ss_pred             eeecccC---------CCceEEEEEecCC-CCHHHHHHh---cccCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHH
Confidence            8732110         1235799999998 599999986   22345899999999999999999999999999999999


Q ss_pred             cEEEecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHHH
Q 003185          657 NILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGC  736 (840)
Q Consensus       657 NILLd~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLGv  736 (840)
                      |||++.+       +.+||+|||++........           .....||+.|+|||++.+    ..++.++|||||||
T Consensus       150 Nili~~~-------~~~kl~Dfg~~~~~~~~~~-----------~~~~~~~~~y~aPE~~~~----~~~~~~~Di~slG~  207 (326)
T 1blx_A          150 NILVTSS-------GQIKLADFGLARIYSFQMA-----------LTSVVVTLWYRAPEVLLQ----SSYATPVDLWSVGC  207 (326)
T ss_dssp             GEEECTT-------CCEEECSCCSCCCCCGGGG-----------GCCCCCCCTTCCHHHHTT----CCCCTHHHHHHHHH
T ss_pred             HeEEcCC-------CCEEEecCcccccccCCCC-----------ccccccccceeCHHHHhc----CCCCcchhHHHHHH
Confidence            9999877       4699999999986543221           123468999999999976    56899999999999


Q ss_pred             HHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCcchHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCC
Q 003185          737 LLLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPT  816 (840)
Q Consensus       737 IL~ELLTG~~PF~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L~dLI~rCL~~DP~  816 (840)
                      ++|+|++|+.||.+....+....+...........+..........+. ..............+..+.+||.+||..||.
T Consensus       208 il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~  286 (326)
T 1blx_A          208 IFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFH-SKSAQPIEKFVTDIDELGKDLLLKCLTFNPA  286 (326)
T ss_dssp             HHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGSCTTCSSCGGGSC-CCCCCCGGGTCCSCCHHHHHHHHHHSCSSTT
T ss_pred             HHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCcccCccccccchhhhc-ccCcchhhhccccCCHHHHHHHHHHcCCCcc
Confidence            999999999999998877776666543111111111110000000000 0000001112234567899999999999999


Q ss_pred             CCCCHHHHHHHHH
Q 003185          817 ERPTAGDLYEMFV  829 (840)
Q Consensus       817 eRPSa~ELLehLe  829 (840)
                      +|||+.++++|..
T Consensus       287 ~Rpt~~e~l~hp~  299 (326)
T 1blx_A          287 KRISAYSALSHPY  299 (326)
T ss_dssp             TSCCHHHHHTSGG
T ss_pred             cCCCHHHHhcCcc
Confidence            9999999998843


No 203
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00  E-value=2.4e-39  Score=349.11  Aligned_cols=267  Identities=24%  Similarity=0.366  Sum_probs=204.0

Q ss_pred             CCCCCceeeeeecccCceEEEEEEE--CCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhC-CCCCcceeeeEEe
Q 003185          502 GSFPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEMYGHKI  578 (840)
Q Consensus       502 ~~~~~y~i~~~LG~G~fG~Vy~a~~--~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L-~HpNIV~l~g~~~  578 (840)
                      ...++|++.+.||+|+||.||+|.+  .+..||+|++.....     ..+    .+.+|+.+++++ +||||+++++++.
T Consensus        21 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-----~~~----~~~~e~~~l~~l~~h~~i~~~~~~~~   91 (326)
T 2x7f_A           21 DPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGD-----EEE----EIKQEINMLKKYSHHRNIATYYGAFI   91 (326)
T ss_dssp             CCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSS-----TTH----HHHHHHHHHHHHCCSTTBCCEEEEEE
T ss_pred             CCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCcc-----cHH----HHHHHHHHHHhccCCCCeeeeeeEEe
Confidence            3567899999999999999999998  678999999754321     112    348899999999 7999999999998


Q ss_pred             cCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCCCcE
Q 003185          579 SSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENI  658 (840)
Q Consensus       579 ~~~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKPeNI  658 (840)
                      .....        ......+|||||+++++|.+++...   ....+++..++.++.||+.||.|||++||+||||||+||
T Consensus        92 ~~~~~--------~~~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NI  160 (326)
T 2x7f_A           92 KKNPP--------GMDDQLWLVMEFCGAGSVTDLIKNT---KGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNV  160 (326)
T ss_dssp             ECC----------CCCCEEEEEEECCTTEEHHHHHHHS---GGGCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGE
T ss_pred             eccCc--------cccceEEEEEEcCCCCcHHHHHHhc---ccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCcHHHE
Confidence            64311        0123579999999999999999862   224689999999999999999999999999999999999


Q ss_pred             EEecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhccc-CCCCCCchhhHHHHHHH
Q 003185          659 LIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMH-KPNLYGLEVDIWSYGCL  737 (840)
Q Consensus       659 LLd~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~-~~~~~s~kSDVWSLGvI  737 (840)
                      |++.+       +.+||+|||++.........          .....||+.|+|||++.... ....++.++|||||||+
T Consensus       161 l~~~~-------~~~kl~Dfg~~~~~~~~~~~----------~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~i  223 (326)
T 2x7f_A          161 LLTEN-------AEVKLVDFGVSAQLDRTVGR----------RNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGIT  223 (326)
T ss_dssp             EECTT-------CCEEECCCTTTC-----------------------CCGGGCCHHHHC--------CCTTHHHHHHHHH
T ss_pred             EEcCC-------CCEEEeeCcCceecCcCccc----------cccccCCccccChhhhccccccCcCCCccchHHHHHHH
Confidence            99876       45999999999765432111          12346899999999996321 12567899999999999


Q ss_pred             HHHHHhCCCCCCCCCHHHHHHHHHcCCCCCcchHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCC
Q 003185          738 LLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTE  817 (840)
Q Consensus       738 L~ELLTG~~PF~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L~dLI~rCL~~DP~e  817 (840)
                      +|+|++|..||...........+.....+.+..                          ...+..+.+||.+||..||.+
T Consensus       224 l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~l~~li~~~l~~dp~~  277 (326)
T 2x7f_A          224 AIEMAEGAPPLCDMHPMRALFLIPRNPAPRLKS--------------------------KKWSKKFQSFIESCLVKNHSQ  277 (326)
T ss_dssp             HHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCSC--------------------------SCSCHHHHHHHHHHCCSSGGG
T ss_pred             HHHHHhCCCCCCCCcHHHHHHHhhcCccccCCc--------------------------cccCHHHHHHHHHHhccChhh
Confidence            999999999998888777666665543322110                          112457899999999999999


Q ss_pred             CCCHHHHHHHHHhh
Q 003185          818 RPTAGDLYEMFVAR  831 (840)
Q Consensus       818 RPSa~ELLehLe~l  831 (840)
                      ||++.++++|..-.
T Consensus       278 Rps~~~ll~hp~~~  291 (326)
T 2x7f_A          278 RPATEQLMKHPFIR  291 (326)
T ss_dssp             SCCHHHHHTSHHHH
T ss_pred             CCCHHHHhhChHHh
Confidence            99999999986543


No 204
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00  E-value=6e-40  Score=356.43  Aligned_cols=260  Identities=20%  Similarity=0.250  Sum_probs=204.8

Q ss_pred             CCceee-eeecccCceEEEEEEE--CCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCC-CCCcceeeeEEecC
Q 003185          505 PSLSSC-DEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALR-HSCIVEMYGHKISS  580 (840)
Q Consensus       505 ~~y~i~-~~LG~G~fG~Vy~a~~--~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~-HpNIV~l~g~~~~~  580 (840)
                      +.|.+. +.||+|+||.||+|.+  .+..||+|++......  ....    ..+.+|+.++..+. ||||+++++++...
T Consensus        28 ~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~----~~~~~e~~~l~~l~~~~~iv~~~~~~~~~  101 (327)
T 3lm5_A           28 NFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRG--QDCR----AEILHEIAVLELAKSCPRVINLHEVYENT  101 (327)
T ss_dssp             HHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETT--EECH----HHHHHHHHHHHHTTTCTTBCCEEEEEECS
T ss_pred             hEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcc--hHHH----HHHHHHHHHHHhccCCCCEEEEEEEEEeC
Confidence            346776 8999999999999998  4789999997644321  1112    23489999999996 69999999999865


Q ss_pred             CCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCCCcEEE
Q 003185          581 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILI  660 (840)
Q Consensus       581 ~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKPeNILL  660 (840)
                      .              ..++||||+.+|+|.+++..   .....+++..++.++.||+.||+|||++||+||||||+|||+
T Consensus       102 ~--------------~~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~i~~ql~~~L~~LH~~givH~Dikp~NIl~  164 (327)
T 3lm5_A          102 S--------------EIILILEYAAGGEIFSLCLP---ELAEMVSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILL  164 (327)
T ss_dssp             S--------------EEEEEEECCTTEEGGGGGSS---CC-CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEE
T ss_pred             C--------------eEEEEEEecCCCcHHHHHHH---hcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCChHHEEE
Confidence            5              35999999999999998753   223568999999999999999999999999999999999999


Q ss_pred             ecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHHHHHHH
Q 003185          661 DLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLE  740 (840)
Q Consensus       661 d~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLGvIL~E  740 (840)
                      +...    ..+.+||+|||+++.......           .....||+.|+|||++.+    ..++.++|||||||++|+
T Consensus       165 ~~~~----~~~~~kL~Dfg~a~~~~~~~~-----------~~~~~gt~~y~aPE~~~~----~~~~~~~DiwslG~il~~  225 (327)
T 3lm5_A          165 SSIY----PLGDIKIVDFGMSRKIGHACE-----------LREIMGTPEYLAPEILNY----DPITTATDMWNIGIIAYM  225 (327)
T ss_dssp             SCBT----TBCCEEECCGGGCEEC--------------------CCCGGGCCHHHHTT----CCCCTHHHHHHHHHHHHH
T ss_pred             ecCC----CCCcEEEeeCccccccCCccc-----------cccccCCcCccCCeeecC----CCCCchhhHHHHHHHHHH
Confidence            8731    125699999999987643221           123469999999999976    678899999999999999


Q ss_pred             HHhCCCCCCCCCHHHHHHHHHcCCCCCcchHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCC
Q 003185          741 LLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPT  820 (840)
Q Consensus       741 LLTG~~PF~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L~dLI~rCL~~DP~eRPS  820 (840)
                      |++|..||.+.+..+....+..........                        .....+..+.+||.+||..||.+|||
T Consensus       226 ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~------------------------~~~~~~~~~~~li~~~L~~dP~~Rpt  281 (327)
T 3lm5_A          226 LLTHTSPFVGEDNQETYLNISQVNVDYSEE------------------------TFSSVSQLATDFIQSLLVKNPEKRPT  281 (327)
T ss_dssp             HHHSSCSSCCSSHHHHHHHHHHTCCCCCTT------------------------TTTTSCHHHHHHHHHHSCSSGGGSCC
T ss_pred             HHhCCCCCCCCCchHHHHHHHhcccccCch------------------------hhcccCHHHHHHHHHHcCCChhhCcC
Confidence            999999999988888777766553221111                        11223567899999999999999999


Q ss_pred             HHHHHHHHHh
Q 003185          821 AGDLYEMFVA  830 (840)
Q Consensus       821 a~ELLehLe~  830 (840)
                      ++++++|.+-
T Consensus       282 ~~~ll~h~~~  291 (327)
T 3lm5_A          282 AEICLSHSWL  291 (327)
T ss_dssp             HHHHTTCGGG
T ss_pred             HHHHhCCHhh
Confidence            9999998553


No 205
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00  E-value=2e-39  Score=344.41  Aligned_cols=258  Identities=26%  Similarity=0.322  Sum_probs=209.5

Q ss_pred             CCCceeeeeecccCceEEEEEEE--CCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeEEecCC
Q 003185          504 FPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK  581 (840)
Q Consensus       504 ~~~y~i~~~LG~G~fG~Vy~a~~--~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~l~g~~~~~~  581 (840)
                      .++|++.+.||+|+||.||+|.+  .+..+|+|++.......  ...+    .+.+|+.++++++||||+++++++....
T Consensus        21 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~--~~~~----~~~~e~~~l~~l~h~~i~~~~~~~~~~~   94 (287)
T 2wei_A           21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKN--KDTS----TILREVELLKKLDHPNIMKLFEILEDSS   94 (287)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSS--SCHH----HHHHHHHHHHTCCCTTBCCEEEEEECSS
T ss_pred             hhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccch--HHHH----HHHHHHHHHHhccCCCccEEEEEEeCCC
Confidence            46899999999999999999998  57889999976443221  1222    3489999999999999999999988654


Q ss_pred             CCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCCCcEEEe
Q 003185          582 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID  661 (840)
Q Consensus       582 ~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKPeNILLd  661 (840)
                                    ..++||||+++++|.+++..     ...+++..++.++.||+.||.|||++||+||||||+|||++
T Consensus        95 --------------~~~lv~e~~~~~~L~~~l~~-----~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIlv~  155 (287)
T 2wei_A           95 --------------SFYIVGELYTGGELFDEIIK-----RKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLE  155 (287)
T ss_dssp             --------------EEEEEECCCCSCBHHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEES
T ss_pred             --------------eEEEEEEccCCCCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCChhhEEEe
Confidence                          35999999999999999876     24689999999999999999999999999999999999997


Q ss_pred             cccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHHHHHHHH
Q 003185          662 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL  741 (840)
Q Consensus       662 ~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLGvIL~EL  741 (840)
                      .++    ....+||+|||++........           .....||+.|+|||++.+     .++.++||||||+++|+|
T Consensus       156 ~~~----~~~~~kL~Dfg~~~~~~~~~~-----------~~~~~~~~~y~aPE~~~~-----~~~~~~Di~slG~~l~~l  215 (287)
T 2wei_A          156 SKE----KDCDIKIIDFGLSTCFQQNTK-----------MKDRIGTAYYIAPEVLRG-----TYDEKCDVWSAGVILYIL  215 (287)
T ss_dssp             CSS----TTCCEEECSTTGGGTBCCCSS-----------CSCHHHHHTTCCHHHHTT-----CCCTHHHHHHHHHHHHHH
T ss_pred             cCC----CcccEEEeccCcceeecCCCc-----------cccccCcccccChHHhcC-----CCCCchhhHhHHHHHHHH
Confidence            653    235799999999976543211           122358899999999874     478999999999999999


Q ss_pred             HhCCCCCCCCCHHHHHHHHHcCCCCCcchHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH
Q 003185          742 LTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA  821 (840)
Q Consensus       742 LTG~~PF~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L~dLI~rCL~~DP~eRPSa  821 (840)
                      ++|..||.+.+..++...+..+..+....                        .....+..+.+||.+||..||.+|||+
T Consensus       216 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~~li~~~l~~dp~~Rps~  271 (287)
T 2wei_A          216 LSGTPPFYGKNEYDILKRVETGKYAFDLP------------------------QWRTISDDAKDLIRKMLTFHPSLRITA  271 (287)
T ss_dssp             HHSSCSSCCSSHHHHHHHHHHCCCCCCSG------------------------GGTTSCHHHHHHHHHHTCSSGGGSCCH
T ss_pred             HhCCCCCCCCCHHHHHHHHHcCCCCCCch------------------------hhhhcCHHHHHHHHHHcccChhhCcCH
Confidence            99999999988888877777654321110                        011235679999999999999999999


Q ss_pred             HHHHHHHHh
Q 003185          822 GDLYEMFVA  830 (840)
Q Consensus       822 ~ELLehLe~  830 (840)
                      .++++|..-
T Consensus       272 ~ell~hp~~  280 (287)
T 2wei_A          272 TQCLEHPWI  280 (287)
T ss_dssp             HHHHHSHHH
T ss_pred             HHHhcCHHH
Confidence            999998543


No 206
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00  E-value=2.5e-39  Score=382.75  Aligned_cols=257  Identities=22%  Similarity=0.303  Sum_probs=205.3

Q ss_pred             CCceeee-eecccCceEEEEEEE----CCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeEEec
Q 003185          505 PSLSSCD-EAGKSVSSSLFRCKF----GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKIS  579 (840)
Q Consensus       505 ~~y~i~~-~LG~G~fG~Vy~a~~----~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~l~g~~~~  579 (840)
                      +++.+.+ .||+|+||.||+|.+    .+..||||+....  . .....+.    +.+|+.+|++++|||||++++++..
T Consensus       335 ~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~--~-~~~~~~~----~~~E~~il~~l~hpniv~l~~~~~~  407 (613)
T 2ozo_A          335 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQG--T-EKADTEE----MMREAQIMHQLDNPYIVRLIGVCQA  407 (613)
T ss_dssp             TSEEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCC--C-SSTTHHH----HHHHHHHHTTCCCTTBCCEEEEEES
T ss_pred             cceeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCC--C-ChHHHHH----HHHHHHHHHhCCCCCEeeEEEEecc
Confidence            4556666 899999999999987    3456888885432  1 1122233    4899999999999999999999874


Q ss_pred             CCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCCCcEE
Q 003185          580 SKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENIL  659 (840)
Q Consensus       580 ~~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKPeNIL  659 (840)
                      ..               .+|||||+.+|+|.+++..    ....+++..++.|+.||+.||+|||++|||||||||+|||
T Consensus       408 ~~---------------~~lv~E~~~~g~L~~~l~~----~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiHrDlkp~NIL  468 (613)
T 2ozo_A          408 EA---------------LMLVMEMAGGGPLHKFLVG----KREEIPVSNVAELLHQVSMGMKYLEEKNFVHRNLAARNVL  468 (613)
T ss_dssp             SS---------------EEEEEECCTTCBHHHHHTT----CTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEE
T ss_pred             CC---------------eEEEEEeCCCCcHHHHHhh----ccCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCcCCHHHEE
Confidence            32               4999999999999999864    2356999999999999999999999999999999999999


Q ss_pred             EecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHHHHHH
Q 003185          660 IDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLL  739 (840)
Q Consensus       660 Ld~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLGvIL~  739 (840)
                      |+.+       +.+||+|||+++.+.......       .......+|+.|+|||++.+    ..++.++|||||||+||
T Consensus       469 l~~~-------~~vkL~DFGla~~~~~~~~~~-------~~~~~~~~~~~y~APE~~~~----~~~~~~sDvwSlGv~l~  530 (613)
T 2ozo_A          469 LVNR-------HYAKISDFGLSKALGADDSYY-------TARSAGKWPLKWYAPECINF----RKFSSRSDVWSYGVTMW  530 (613)
T ss_dssp             EEET-------TEEEECCCSTTTTCC---------------------CCTTSCHHHHHH----CCCCHHHHHHHHHHHHH
T ss_pred             EcCC-------CcEEEeeccCcccccCCCcee-------eeccCCCCccceeCHhhhcC----CCCCcHHHHHHHHHHHH
Confidence            9977       569999999998764322110       00112246789999999986    67899999999999999


Q ss_pred             HHHh-CCCCCCCCCHHHHHHHHHcCCCCCcchHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCC
Q 003185          740 ELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTER  818 (840)
Q Consensus       740 ELLT-G~~PF~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L~dLI~rCL~~DP~eR  818 (840)
                      ||++ |+.||.+.+..++...+..+.++..+.                           .++..+.+||.+||..||.+|
T Consensus       531 ellt~G~~Pf~~~~~~~~~~~i~~~~~~~~p~---------------------------~~~~~l~~li~~cl~~dP~~R  583 (613)
T 2ozo_A          531 EALSYGQKPYKKMKGPEVMAFIEQGKRMECPP---------------------------ECPPELYALMSDCWIYKWEDR  583 (613)
T ss_dssp             HHHTTSCCTTTTCCSHHHHHHHHTTCCCCCCT---------------------------TCCHHHHHHHHHTTCSSTTTS
T ss_pred             HHHHCCCCCCCCCCHHHHHHHHHcCCCCCCCC---------------------------cCCHHHHHHHHHHcCCChhHC
Confidence            9998 999999998888888888776544432                           134579999999999999999


Q ss_pred             CCHHHHHHHHHhhc
Q 003185          819 PTAGDLYEMFVART  832 (840)
Q Consensus       819 PSa~ELLehLe~l~  832 (840)
                      |++.+|++.|+.+.
T Consensus       584 Ps~~~l~~~L~~~~  597 (613)
T 2ozo_A          584 PDFLTVEQRMRACY  597 (613)
T ss_dssp             CCHHHHHHHHHHHH
T ss_pred             cCHHHHHHHHHHHH
Confidence            99999999988764


No 207
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00  E-value=5.2e-39  Score=347.00  Aligned_cols=275  Identities=20%  Similarity=0.248  Sum_probs=202.5

Q ss_pred             CCCCCceeeeeecccCceEEEEEEE--CCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCC-CCCcceeeeEEe
Q 003185          502 GSFPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALR-HSCIVEMYGHKI  578 (840)
Q Consensus       502 ~~~~~y~i~~~LG~G~fG~Vy~a~~--~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~-HpNIV~l~g~~~  578 (840)
                      ...++|++.+.||+|+||.||+|.+  .+..||+|++...       ..+    .+.+|+.++++++ ||||+++++++.
T Consensus        33 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-------~~~----~~~~E~~~l~~l~~~~~i~~~~~~~~  101 (330)
T 3nsz_A           33 GNQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV-------KKK----KIKREIKILENLRGGPNIITLADIVK  101 (330)
T ss_dssp             EEGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC-------CHH----HHHHHHHHHHHHTTSTTBCCEEEEEE
T ss_pred             cCCCceEEEEEecccCCeEEEEEEECCCCcEEEEEEeccc-------chH----HHHHHHHHHHHcCCCCCEEEeeeeec
Confidence            3457899999999999999999987  6789999986421       112    3489999999998 999999999998


Q ss_pred             cCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCCCcE
Q 003185          579 SSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENI  658 (840)
Q Consensus       579 ~~~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKPeNI  658 (840)
                      ....            ...++||||+.+++|.+++.        .+++..++.++.||+.||.|||++||+||||||+||
T Consensus       102 ~~~~------------~~~~lv~e~~~~~~l~~~~~--------~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Ni  161 (330)
T 3nsz_A          102 DPVS------------RTPALVFEHVNNTDFKQLYQ--------TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNV  161 (330)
T ss_dssp             CTTT------------CCEEEEEECCCCCCHHHHGG--------GCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGE
T ss_pred             cCCC------------CceEEEEeccCchhHHHHHH--------hCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHE
Confidence            6321            24699999999999999874        388999999999999999999999999999999999


Q ss_pred             EEecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHHHHH
Q 003185          659 LIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLL  738 (840)
Q Consensus       659 LLd~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLGvIL  738 (840)
                      |++.++      ..+||+|||+++.......           .....||+.|+|||++.+   ...++.++|||||||+|
T Consensus       162 l~~~~~------~~~kl~Dfg~a~~~~~~~~-----------~~~~~~~~~y~aPE~~~~---~~~~~~~~DiwslG~il  221 (330)
T 3nsz_A          162 MIDHEH------RKLRLIDWGLAEFYHPGQE-----------YNVRVASRYFKGPELLVD---YQMYDYSLDMWSLGCML  221 (330)
T ss_dssp             EEETTT------TEEEECCCTTCEECCTTCC-----------CCSCCSCGGGCCHHHHTT---CCCCCTHHHHHHHHHHH
T ss_pred             EEcCCC------CEEEEEeCCCceEcCCCCc-----------cccccccccccChhhhcC---CCcCCchhhHHHHHHHH
Confidence            998663      3699999999986543221           123468999999999875   35688999999999999


Q ss_pred             HHHHhCCCCCCCC-CHHHHHHHHHcC-CCC-----------CcchHHhhhccCccccccccCCCCCCchhhhhhHHHHHH
Q 003185          739 LELLTLQVPYMGL-SELEIHDLIQMG-KRP-----------RLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVD  805 (840)
Q Consensus       739 ~ELLTG~~PF~~~-~~~el~~~I~~~-~~p-----------~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L~d  805 (840)
                      |+|++|..||... ...+....+... ..+           .+...+.........   ...............+..+.+
T Consensus       222 ~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~  298 (330)
T 3nsz_A          222 ASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSR---KRWERFVHSENQHLVSPEALD  298 (330)
T ss_dssp             HHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCCTHHHHHHCCCCC---CCGGGGCCTTTGGGCCHHHHH
T ss_pred             HHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHHHhccccccchhhhhhhccc---cchhhhccccccccCCHHHHH
Confidence            9999999999443 333333322221 110           111111110000000   000000111222335678999


Q ss_pred             HHHHhcccCCCCCCCHHHHHHHHHh
Q 003185          806 VFRRCTEENPTERPTAGDLYEMFVA  830 (840)
Q Consensus       806 LI~rCL~~DP~eRPSa~ELLehLe~  830 (840)
                      ||.+||+.||.+|||++|+++|.+-
T Consensus       299 li~~~L~~dP~~Rpta~e~l~hp~f  323 (330)
T 3nsz_A          299 FLDKLLRYDHQSRLTAREAMEHPYF  323 (330)
T ss_dssp             HHHTTSCSSGGGSCCHHHHHTSGGG
T ss_pred             HHHHHhcCCcccCCCHHHHhcCccH
Confidence            9999999999999999999998543


No 208
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00  E-value=2e-39  Score=362.31  Aligned_cols=293  Identities=20%  Similarity=0.226  Sum_probs=212.5

Q ss_pred             CCCceeeeeecccCceEEEEEEEC--CeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeEEecCC
Q 003185          504 FPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK  581 (840)
Q Consensus       504 ~~~y~i~~~LG~G~fG~Vy~a~~~--~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~l~g~~~~~~  581 (840)
                      -++|.+.+.||+|+||.||+|.+.  +..||+|++.......   .    ...+.+|+.+|++++||||+++++++....
T Consensus         8 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~---~----~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~   80 (396)
T 4eut_A            8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLR---P----VDVQMREFEVLKKLNHKNIVKLFAIEEETT   80 (396)
T ss_dssp             SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGS---C----HHHHHHHHHHHHHCCCTTBCCEEEEEECTT
T ss_pred             CCceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccc---h----HHHHHHHHHHHHhcCCCCCCeEEEeeccCC
Confidence            457999999999999999999984  7899999975322111   1    223478999999999999999999987543


Q ss_pred             CCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCCCcEEEe
Q 003185          582 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID  661 (840)
Q Consensus       582 ~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKPeNILLd  661 (840)
                      .            ...+|||||+++|+|.+++...  .....+++..++.++.||+.||.|||++||+||||||+|||+.
T Consensus        81 ~------------~~~~lv~e~~~~g~L~~~l~~~--~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~  146 (396)
T 4eut_A           81 T------------RHKVLIMEFCPCGSLYTVLEEP--SNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRV  146 (396)
T ss_dssp             T------------CCEEEEECCCTTEEHHHHTTSG--GGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEE
T ss_pred             C------------CeeEEEEecCCCCCHHHHHHhh--hcccCCCHHHHHHHHHHHHHHHHHHHHCCEEECCcCHHHEEEe
Confidence            2            1459999999999999999752  1223489999999999999999999999999999999999983


Q ss_pred             cccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCC----CCCCchhhHHHHHHH
Q 003185          662 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKP----NLYGLEVDIWSYGCL  737 (840)
Q Consensus       662 ~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~----~~~s~kSDVWSLGvI  737 (840)
                      ...   +....+||+|||+++.......           .....||+.|+|||++.+....    ..++.++|||||||+
T Consensus       147 ~~~---~~~~~~kL~DFG~a~~~~~~~~-----------~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~i  212 (396)
T 4eut_A          147 IGE---DGQSVYKLTDFGAARELEDDEQ-----------FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVT  212 (396)
T ss_dssp             ECT---TSCEEEEECCGGGCEECCCGGG-----------SSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHH
T ss_pred             ecC---CCceeEEEecCCCceEccCCCc-----------cccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHH
Confidence            221   1236799999999987644321           1234699999999998642100    246789999999999


Q ss_pred             HHHHHhCCCCCCCC----CHHHHHHHHHcCCCCCcchHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhccc
Q 003185          738 LLELLTLQVPYMGL----SELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEE  813 (840)
Q Consensus       738 L~ELLTG~~PF~~~----~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L~dLI~rCL~~  813 (840)
                      +|||++|+.||...    ...++...+..+..+.....+....   ...+................+..+.+||.+||..
T Consensus       213 l~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~---~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~  289 (396)
T 4eut_A          213 FYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAE---NGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEA  289 (396)
T ss_dssp             HHHHHHSSCSEECTTCTTTCHHHHHHHHHSCCTTCCEEEECST---TCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCC
T ss_pred             HHHHHHCCCCCCCCCcccchHHHHHHHhcCCCcccchhheecc---CCCcccCccCCcccccchHHHhhchHHHHHhhcc
Confidence            99999999999642    3344555555543332221111000   0000000000001122355678899999999999


Q ss_pred             CCCCCCCHHHHHHHHHhhcCC
Q 003185          814 NPTERPTAGDLYEMFVARTSS  834 (840)
Q Consensus       814 DP~eRPSa~ELLehLe~l~~~  834 (840)
                      ||.+||++.++++++..+...
T Consensus       290 dP~~R~s~~e~l~~l~~il~~  310 (396)
T 4eut_A          290 DQEKCWGFDQFFAETSDILHR  310 (396)
T ss_dssp             CTTTSCCHHHHHHHHHHHHTC
T ss_pred             ChhhhccHHHHHHHHHHHhhc
Confidence            999999999999999887653


No 209
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00  E-value=2.6e-39  Score=384.22  Aligned_cols=252  Identities=21%  Similarity=0.327  Sum_probs=204.5

Q ss_pred             eeecccCceEEEEEEE----CCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeEEecCCCCCCC
Q 003185          511 DEAGKSVSSSLFRCKF----GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWLPSA  586 (840)
Q Consensus       511 ~~LG~G~fG~Vy~a~~----~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~l~g~~~~~~~~p~~  586 (840)
                      +.||+|+||.||+|.+    .+..||||+.....  ....    ..+.+.+|+.+|++|+|||||++++++....     
T Consensus       375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~--~~~~----~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~-----  443 (635)
T 4fl3_A          375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEA--NDPA----LKDELLAEANVMQQLDNPYIVRMIGICEAES-----  443 (635)
T ss_dssp             EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGG--GCGG----GHHHHHHHHHHHHHCCCTTBCCEEEEEESSS-----
T ss_pred             CEeccCCCEEEEEEEEcCCCcceEEEEEEecccc--CCHH----HHHHHHHHHHHHHhCCCCCEeeEEEEEecCC-----
Confidence            4899999999999976    34679999865332  1112    2234599999999999999999999986432     


Q ss_pred             CCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCCCcEEEeccccc
Q 003185          587 DGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLERKK  666 (840)
Q Consensus       587 ~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKPeNILLd~~~~~  666 (840)
                                .+|||||+++|+|.+++..     ...+++..++.|+.||+.||+|||++|||||||||+||||+.+   
T Consensus       444 ----------~~lv~E~~~~g~L~~~l~~-----~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDLkp~NILl~~~---  505 (635)
T 4fl3_A          444 ----------WMLVMEMAELGPLNKYLQQ-----NRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQ---  505 (635)
T ss_dssp             ----------EEEEEECCTTEEHHHHHHH-----CTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEET---
T ss_pred             ----------EEEEEEccCCCCHHHHHhh-----CCCCCHHHHHHHHHHHHHHHHHHHHCCEeCCCCChHhEEEeCC---
Confidence                      4899999999999999976     3568999999999999999999999999999999999999977   


Q ss_pred             CCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHHHHHHHHHh-CC
Q 003185          667 ADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLT-LQ  745 (840)
Q Consensus       667 ~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLGvIL~ELLT-G~  745 (840)
                          +.+||+|||+++.+.......       .......+|+.|+|||++.+    ..++.++|||||||+||||++ |+
T Consensus       506 ----~~~kL~DFGla~~~~~~~~~~-------~~~~~~~~t~~y~APE~~~~----~~~~~~sDvwSlGv~l~ellt~G~  570 (635)
T 4fl3_A          506 ----HYAKISDFGLSKALRADENYY-------KAQTHGKWPVKWYAPECINY----YKFSSKSDVWSFGVLMWEAFSYGQ  570 (635)
T ss_dssp             ----TEEEECCTTHHHHTTC--------------------CGGGSCHHHHHH----CCCCHHHHHHHHHHHHHHHHTTTC
T ss_pred             ----CCEEEEEcCCccccccCcccc-------ccccCCCCceeeeChhhhcC----CCCCcHHHHHHHHHHHHHHHhCCC
Confidence                569999999998764432110       01122347889999999986    678999999999999999998 99


Q ss_pred             CCCCCCCHHHHHHHHHcCCCCCcchHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHHHHH
Q 003185          746 VPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAGDLY  825 (840)
Q Consensus       746 ~PF~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L~dLI~rCL~~DP~eRPSa~ELL  825 (840)
                      .||.+.+..++...+..+.++..+.                           .++..+.+||.+||..||.+||++.+|+
T Consensus       571 ~Pf~~~~~~~~~~~i~~~~~~~~p~---------------------------~~~~~l~~li~~cl~~dP~~RPs~~~l~  623 (635)
T 4fl3_A          571 KPYRGMKGSEVTAMLEKGERMGCPA---------------------------GCPREMYDLMNLCWTYDVENRPGFAAVE  623 (635)
T ss_dssp             CSSTTCCHHHHHHHHHTTCCCCCCT---------------------------TCCHHHHHHHHHHTCSSTTTSCCHHHHH
T ss_pred             CCCCCCCHHHHHHHHHcCCCCCCCC---------------------------CCCHHHHHHHHHHcCCCHhHCcCHHHHH
Confidence            9999999999888888876554442                           1245799999999999999999999999


Q ss_pred             HHHHhhcC
Q 003185          826 EMFVARTS  833 (840)
Q Consensus       826 ehLe~l~~  833 (840)
                      +.|+.+..
T Consensus       624 ~~L~~~~~  631 (635)
T 4fl3_A          624 LRLRNYYY  631 (635)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
Confidence            99987643


No 210
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00  E-value=8.1e-40  Score=343.56  Aligned_cols=257  Identities=25%  Similarity=0.292  Sum_probs=202.1

Q ss_pred             CCCceeeeeecccCceEEEEEEE--CCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeEEecCC
Q 003185          504 FPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK  581 (840)
Q Consensus       504 ~~~y~i~~~LG~G~fG~Vy~a~~--~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~l~g~~~~~~  581 (840)
                      +++|++.+.||+|+||.||+|.+  .+..+|+|+.......   ...    ..+.+|+.+++.++||||+++++++....
T Consensus         6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~   78 (276)
T 2yex_A            6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV---DCP----ENIKKEICINKMLNHENVVKFYGHRREGN   78 (276)
T ss_dssp             HHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCT---THH----HHHHHHHHHHHTCCCTTBCCEEEEEEETT
T ss_pred             ecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccch---hhh----HHHHHHHHHHHhcCCCCceeeeeEEEcCC
Confidence            46899999999999999999998  4788999997654321   122    34489999999999999999999998655


Q ss_pred             CCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCCCcEEEe
Q 003185          582 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID  661 (840)
Q Consensus       582 ~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKPeNILLd  661 (840)
                      .              .++||||+++++|.+++..     ...+++..++.++.||+.||.|||++||+||||||+|||++
T Consensus        79 ~--------------~~lv~e~~~~~~L~~~l~~-----~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~  139 (276)
T 2yex_A           79 I--------------QYLFLEYCSGGELFDRIEP-----DIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLD  139 (276)
T ss_dssp             E--------------EEEEEECCTTEEGGGGSBT-----TTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC
T ss_pred             E--------------EEEEEEecCCCcHHHHHhh-----ccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCChHHEEEc
Confidence            3              4999999999999998853     35689999999999999999999999999999999999998


Q ss_pred             cccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHHHHHHHH
Q 003185          662 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL  741 (840)
Q Consensus       662 ~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLGvIL~EL  741 (840)
                      .+       +.+||+|||++..........        ......||+.|+|||++.+   ...++.++||||||+++|+|
T Consensus       140 ~~-------~~~kl~dfg~~~~~~~~~~~~--------~~~~~~~~~~y~aPE~~~~---~~~~~~~~Di~slG~il~~l  201 (276)
T 2yex_A          140 ER-------DNLKISDFGLATVFRYNNRER--------LLNKMCGTLPYVAPELLKR---REFHAEPVDVWSCGIVLTAM  201 (276)
T ss_dssp             TT-------CCEEECCCTTCEECEETTEEC--------CBCCCCSCGGGCCGGGGTC---SSBCHHHHHHHHHHHHHHHH
T ss_pred             cC-------CCEEEeeCCCccccCCCcchh--------cccCCccccCccChHHHhc---CCCCCCcchHHHHHHHHHHH
Confidence            76       459999999998664322110        1123468999999999975   22347899999999999999


Q ss_pred             HhCCCCCCCCCHH-HHHHHHHcCCCCCcchHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCC
Q 003185          742 LTLQVPYMGLSEL-EIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPT  820 (840)
Q Consensus       742 LTG~~PF~~~~~~-el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L~dLI~rCL~~DP~eRPS  820 (840)
                      ++|..||...... .....+..... ...                         .....+..+.+||.+||..||.+|||
T Consensus       202 ~~g~~p~~~~~~~~~~~~~~~~~~~-~~~-------------------------~~~~~~~~~~~li~~~l~~~p~~Rps  255 (276)
T 2yex_A          202 LAGELPWDQPSDSCQEYSDWKEKKT-YLN-------------------------PWKKIDSAPLALLHKILVENPSARIT  255 (276)
T ss_dssp             HHSSCCCSCSCTTSHHHHHHHTTCT-TST-------------------------TGGGSCHHHHHHHHHHSCSSTTTSCC
T ss_pred             HhCCCCCCCCchHHHHHHHhhhccc-ccC-------------------------chhhcCHHHHHHHHHHCCCCchhCCC
Confidence            9999999775432 22222222211 000                         01223567899999999999999999


Q ss_pred             HHHHHHHHHh
Q 003185          821 AGDLYEMFVA  830 (840)
Q Consensus       821 a~ELLehLe~  830 (840)
                      +.+|++|..-
T Consensus       256 ~~~il~~~~~  265 (276)
T 2yex_A          256 IPDIKKDRWY  265 (276)
T ss_dssp             HHHHTTCTTT
T ss_pred             HHHHhcCccc
Confidence            9999998553


No 211
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00  E-value=7.5e-39  Score=344.54  Aligned_cols=282  Identities=20%  Similarity=0.210  Sum_probs=207.3

Q ss_pred             CCCCCceeeeeecccCceEEEEEEE---CCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCC------Ccce
Q 003185          502 GSFPSLSSCDEAGKSVSSSLFRCKF---GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHS------CIVE  572 (840)
Q Consensus       502 ~~~~~y~i~~~LG~G~fG~Vy~a~~---~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~Hp------NIV~  572 (840)
                      ..-++|++.+.||+|+||.||+|.+   .+..||+|+....     ...    ...+.+|+.+++.++|+      +|++
T Consensus        11 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-----~~~----~~~~~~e~~~l~~l~~~~~~~~~~i~~   81 (339)
T 1z57_A           11 VLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV-----DRY----CEAARSEIQVLEHLNTTDPNSTFRCVQ   81 (339)
T ss_dssp             EETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSS-----HHH----HHHHHHHHHHHHHHHHHCTTCTTCBCC
T ss_pred             CccCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecC-----Cch----hHHHHHHHHHHHHhhhcCCCCceeeEe
Confidence            3457899999999999999999987   5788999996421     222    23448899999988765      4999


Q ss_pred             eeeEEecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccc
Q 003185          573 MYGHKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRD  652 (840)
Q Consensus       573 l~g~~~~~~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRD  652 (840)
                      +++++....              ..+|||||+ +++|.+++..   .....+++..++.++.||+.||+|||++||+|||
T Consensus        82 ~~~~~~~~~--------------~~~lv~e~~-~~~l~~~l~~---~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~D  143 (339)
T 1z57_A           82 MLEWFEHHG--------------HICIVFELL-GLSTYDFIKE---NGFLPFRLDHIRKMAYQICKSVNFLHSNKLTHTD  143 (339)
T ss_dssp             EEEEEEETT--------------EEEEEEECC-CCBHHHHHHH---TTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCC
T ss_pred             eecccccCC--------------cEEEEEcCC-CCCHHHHHHh---cCCCCCcHHHHHHHHHHHHHHHHHHHHCCCcCCC
Confidence            999998655              359999999 7899999976   2334689999999999999999999999999999


Q ss_pred             CCCCcEEEeccccc------------CCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhccc
Q 003185          653 IKSENILIDLERKK------------ADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMH  720 (840)
Q Consensus       653 LKPeNILLd~~~~~------------~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~  720 (840)
                      |||+|||++..+..            ....+.+||+|||++......             .....||+.|+|||++.+  
T Consensus       144 lkp~Nil~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~-------------~~~~~gt~~y~aPE~~~~--  208 (339)
T 1z57_A          144 LKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATYDDEH-------------HSTLVSTRHYRAPEVILA--  208 (339)
T ss_dssp             CCGGGEEESCCCEEEEEC----CEEEEESCCCEEECCCSSCEETTSC-------------CCSSCSCGGGCCHHHHTT--
T ss_pred             CCHHHEEEeccccccccCCccccccccccCCCceEeeCcccccCccc-------------cccccCCccccChHHhhC--
Confidence            99999999864210            000356999999999764321             123468999999999986  


Q ss_pred             CCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCcchHHhhhccCccccccccCCCCC---------
Q 003185          721 KPNLYGLEVDIWSYGCLLLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFE---------  791 (840)
Q Consensus       721 ~~~~~s~kSDVWSLGvIL~ELLTG~~PF~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~---------  791 (840)
                        ..++.++|||||||++|||++|..||...+..+....+.....+.....+.... .. ..+......+.         
T Consensus       209 --~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~  284 (339)
T 1z57_A          209 --LGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERILGPLPKHMIQKTR-KR-KYFHHDRLDWDEHSSAGRYV  284 (339)
T ss_dssp             --SCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHHHHHHHHHHHCSCCHHHHHHCS-CG-GGEETTEECCCTTSHHHHHH
T ss_pred             --CCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhcc-ch-hHHhhccccccccccccchh
Confidence              568999999999999999999999999888777666554432221111111110 00 00000000000         


Q ss_pred             ---------CchhhhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 003185          792 ---------KPEAELETLSFLVDVFRRCTEENPTERPTAGDLYEMFV  829 (840)
Q Consensus       792 ---------~~~~~~~~s~~L~dLI~rCL~~DP~eRPSa~ELLehLe  829 (840)
                               ........++.+.+||.+||..||.+|||+.|+++|..
T Consensus       285 ~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp~  331 (339)
T 1z57_A          285 SRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREALKHPF  331 (339)
T ss_dssp             HHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTTSGG
T ss_pred             hhcCcchhhhcccchhhHHHHHHHHHHHhCcCcccccCHHHHhcCHH
Confidence                     00111234678999999999999999999999999843


No 212
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00  E-value=5.4e-40  Score=359.31  Aligned_cols=252  Identities=22%  Similarity=0.235  Sum_probs=197.8

Q ss_pred             CCCceeeeeecccCceEEEEEEE--CCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeEEecCC
Q 003185          504 FPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK  581 (840)
Q Consensus       504 ~~~y~i~~~LG~G~fG~Vy~a~~--~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~l~g~~~~~~  581 (840)
                      .++|++.+.||+|+||.||+|.+  .+..||+|++..................+.+|+.+|++++||||+++++++....
T Consensus        23 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~  102 (335)
T 3dls_A           23 SQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQG  102 (335)
T ss_dssp             HHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECSS
T ss_pred             ccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeCC
Confidence            46799999999999999999986  6788999997654322210000001123378999999999999999999998655


Q ss_pred             CCCCCCCCCccccceEEEEEeccCCC-CHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCCCcEEE
Q 003185          582 WLPSADGNPEHHLLQSAIFMEYVKGG-SVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILI  660 (840)
Q Consensus       582 ~~p~~~g~~~~~~~~~~LVmEy~~gG-SL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKPeNILL  660 (840)
                      .              .++||||+.+| +|.+++..     ...+++..++.|+.||+.||.|||++||+||||||+|||+
T Consensus       103 ~--------------~~lv~e~~~~g~~l~~~~~~-----~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll  163 (335)
T 3dls_A          103 F--------------FQLVMEKHGSGLDLFAFIDR-----HPRLDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVI  163 (335)
T ss_dssp             E--------------EEEEEECCTTSCBHHHHHHT-----CCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE
T ss_pred             E--------------EEEEEEeCCCCccHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHhCCeEEeccCHHHEEE
Confidence            3              49999999766 99999975     3569999999999999999999999999999999999999


Q ss_pred             ecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHHHHHHH
Q 003185          661 DLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLE  740 (840)
Q Consensus       661 d~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLGvIL~E  740 (840)
                      +.+       +.+||+|||++........           .....||+.|+|||++.+   ...++.++|||||||++|+
T Consensus       164 ~~~-------~~~kL~Dfg~a~~~~~~~~-----------~~~~~gt~~y~aPE~~~~---~~~~~~~~DiwslG~il~e  222 (335)
T 3dls_A          164 AED-------FTIKLIDFGSAAYLERGKL-----------FYTFCGTIEYCAPEVLMG---NPYRGPELEMWSLGVTLYT  222 (335)
T ss_dssp             CTT-------SCEEECCCTTCEECCTTCC-----------BCEECSCGGGCCHHHHTT---CCBCSHHHHHHHHHHHHHH
T ss_pred             cCC-------CcEEEeecccceECCCCCc-----------eeccCCCccccChhhhcC---CCCCCCcccchhHHHHHHH
Confidence            877       4699999999986643221           123469999999999986   2234889999999999999


Q ss_pred             HHhCCCCCCCCCHHHHHHHHHcCCCCCcchHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCC
Q 003185          741 LLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPT  820 (840)
Q Consensus       741 LLTG~~PF~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L~dLI~rCL~~DP~eRPS  820 (840)
                      |++|..||......     +....  ..                           ....+..+.+||.+||..||.+|||
T Consensus       223 l~~g~~pf~~~~~~-----~~~~~--~~---------------------------~~~~~~~l~~li~~~L~~dP~~Rps  268 (335)
T 3dls_A          223 LVFEENPFCELEET-----VEAAI--HP---------------------------PYLVSKELMSLVSGLLQPVPERRTT  268 (335)
T ss_dssp             HHHSSCSCSSGGGG-----TTTCC--CC---------------------------SSCCCHHHHHHHHHHTCSSGGGSCC
T ss_pred             HHhCCCchhhHHHH-----Hhhcc--CC---------------------------CcccCHHHHHHHHHHccCChhhCcC
Confidence            99999999653110     00000  00                           0113557999999999999999999


Q ss_pred             HHHHHHHHH
Q 003185          821 AGDLYEMFV  829 (840)
Q Consensus       821 a~ELLehLe  829 (840)
                      +.+|++|.+
T Consensus       269 ~~ell~hp~  277 (335)
T 3dls_A          269 LEKLVTDPW  277 (335)
T ss_dssp             HHHHHHCTT
T ss_pred             HHHHhcCcc
Confidence            999999965


No 213
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00  E-value=2.4e-41  Score=359.40  Aligned_cols=269  Identities=26%  Similarity=0.358  Sum_probs=189.7

Q ss_pred             CCceeeeeecccCceEEEEEEECCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHh--CCCCCcceeeeEEecCCC
Q 003185          505 PSLSSCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGA--LRHSCIVEMYGHKISSKW  582 (840)
Q Consensus       505 ~~y~i~~~LG~G~fG~Vy~a~~~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~--L~HpNIV~l~g~~~~~~~  582 (840)
                      ++|.+.+.||+|+||.||+|.+.+..||+|++...       ....    +.+|..++..  ++||||+++++++.....
T Consensus         3 ~~y~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~-------~~~~----~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~   71 (303)
T 3gxj_A            3 RTIVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSR-------EERS----WFREAEIYQTVMLRHENILGFIAADNKDNG   71 (303)
T ss_dssp             GGCCCCEEEEECSSSEEEEC-CTTSCEEEEECC-T-------THHH----HHHHHHHHTSTTCCC-CBCCEEEEEEEECS
T ss_pred             ceeeehhhccCCCCeEEEEEEEcCcceEEEEeccc-------chhh----HHHHHHHHHHHhccCcceeeeeeecccCCC
Confidence            46899999999999999999999999999985321       1122    3678888877  789999999999886542


Q ss_pred             CCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHH--------hCCeecccCC
Q 003185          583 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELH--------SKHIMHRDIK  654 (840)
Q Consensus       583 ~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLH--------s~gIVHRDLK  654 (840)
                                .....++||||+++|+|.+++..      ..+++..++.++.||+.||.|||        ++||+|||||
T Consensus        72 ----------~~~~~~lv~e~~~~g~L~~~l~~------~~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlk  135 (303)
T 3gxj_A           72 ----------TWTQLWLVSDYHEHGSLFDYLNR------YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLK  135 (303)
T ss_dssp             ----------SSEEEEEEEECCTTCCHHHHHHH------CCBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC-CCCSCCC
T ss_pred             ----------ccceeEEEEeccCCCCHHHHHhc------cCcchHHHHHHHHHHHHHHHHHHHHHhhhccCCCEeeCcCC
Confidence                      12356999999999999999976      46888899999999999999999        9999999999


Q ss_pred             CCcEEEecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCC--CCCchhhHH
Q 003185          655 SENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPN--LYGLEVDIW  732 (840)
Q Consensus       655 PeNILLd~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~--~~s~kSDVW  732 (840)
                      |+|||++.+       +.+||+|||+++..........      .......||+.|+|||++.+.....  .++.++|||
T Consensus       136 p~Nil~~~~-------~~~kl~DFg~a~~~~~~~~~~~------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Diw  202 (303)
T 3gxj_A          136 SKNILVKKN-------GTCCIADLGLAVRHDSATDTID------IAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIY  202 (303)
T ss_dssp             GGGC-CCTT-------CCC-BCCCCC-CCEETTTTEES------CC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHH
T ss_pred             HHHeEECCC-------CCEEEeecCcceeccCCCcccc------cccCCCCcCccccCHhhhcCcccccccccCcchhHH
Confidence            999999877       4699999999976654322210      1123346999999999997622111  334789999


Q ss_pred             HHHHHHHHHHhC----------CCCCCCCCH-----HHHHHHHHcC-CCCCcchHHhhhccCccccccccCCCCCCchhh
Q 003185          733 SYGCLLLELLTL----------QVPYMGLSE-----LEIHDLIQMG-KRPRLTDELEALGSCHEHEVAQSGSGFEKPEAE  796 (840)
Q Consensus       733 SLGvIL~ELLTG----------~~PF~~~~~-----~el~~~I~~~-~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~  796 (840)
                      ||||++|||++|          ..||.....     .++...+... .++.++..+                      ..
T Consensus       203 slG~il~el~~g~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------~~  260 (303)
T 3gxj_A          203 AMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRW----------------------QS  260 (303)
T ss_dssp             C-CCCC-CTGGGBCBTTBC-CCCCTTTTTCC-CCCCC-CHHHHTTSCCCCCCCGGG----------------------GS
T ss_pred             HHHHHHHHHHhcCCCccccceeeccccccCCCCccHHHHHHHHHHhhcCCCccccc----------------------cc
Confidence            999999999999          667754321     1222222211 222222111                      11


Q ss_pred             hhhHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhcCCC
Q 003185          797 LETLSFLVDVFRRCTEENPTERPTAGDLYEMFVARTSSS  835 (840)
Q Consensus       797 ~~~s~~L~dLI~rCL~~DP~eRPSa~ELLehLe~l~~~~  835 (840)
                      ...++.+.+|+.+||+.||.+|||+.+|++.|+.+....
T Consensus       261 ~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~l~~~~  299 (303)
T 3gxj_A          261 CEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQE  299 (303)
T ss_dssp             SHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHC-CCC-
T ss_pred             hhhHHHHHHHHHHHhccCcccCCCHHHHHHHHHHhhhhc
Confidence            245678999999999999999999999999999987654


No 214
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00  E-value=3.7e-39  Score=385.30  Aligned_cols=255  Identities=24%  Similarity=0.294  Sum_probs=209.4

Q ss_pred             CCCCCceeeeeecccCceEEEEEEE--CCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhC-CCCCcceeeeEEe
Q 003185          502 GSFPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEMYGHKI  578 (840)
Q Consensus       502 ~~~~~y~i~~~LG~G~fG~Vy~a~~--~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L-~HpNIV~l~g~~~  578 (840)
                      ..+++|++.+.||+|+||.||+|.+  .+..||+|++.....     ......+.+..|..+|..+ +||||+++++++.
T Consensus       338 ~~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~-----~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~  412 (674)
T 3pfq_A          338 MKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVV-----IQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQ  412 (674)
T ss_dssp             --CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHH-----HHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECB
T ss_pred             ccccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEecccc-----ccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEE
Confidence            5688999999999999999999998  456799999753211     0111123448899999988 5999999999987


Q ss_pred             cCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCCCcE
Q 003185          579 SSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENI  658 (840)
Q Consensus       579 ~~~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKPeNI  658 (840)
                      ...              .+||||||++||+|..++..     ...+++..++.++.||+.||+|||++|||||||||+||
T Consensus       413 ~~~--------------~~~lV~E~~~gg~L~~~l~~-----~~~~~~~~~~~~~~qi~~aL~~LH~~gIiHrDLKp~NI  473 (674)
T 3pfq_A          413 TMD--------------RLYFVMEYVNGGDLMYHIQQ-----VGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNV  473 (674)
T ss_dssp             CSS--------------EEEEEEECCCSCBHHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHHTSEECCCCCSTTE
T ss_pred             eCC--------------EEEEEEeCcCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHhCCeEeccCChhhE
Confidence            655              35999999999999999986     25699999999999999999999999999999999999


Q ss_pred             EEecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHHHHH
Q 003185          659 LIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLL  738 (840)
Q Consensus       659 LLd~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLGvIL  738 (840)
                      ||+.+       +.+||+|||+|+.......          ......||+.|||||++.+    ..++.++|||||||+|
T Consensus       474 Ll~~~-------g~ikL~DFGla~~~~~~~~----------~~~~~~GT~~Y~APE~l~~----~~~~~~~DvwSlGvil  532 (674)
T 3pfq_A          474 MLDSE-------GHIKIADFGMCKENIWDGV----------TTKTFCGTPDYIAPEIIAY----QPYGKSVDWWAFGVLL  532 (674)
T ss_dssp             EECSS-------SCEEECCCTTCEECCCTTC----------CBCCCCSCSSSCCHHHHTC----CCBSTHHHHHHHHHHH
T ss_pred             EEcCC-------CcEEEeecceeeccccCCc----------ccccccCCCcccCHhhhcC----CCCCccceEechHHHH
Confidence            99877       4699999999985432111          1234579999999999976    6789999999999999


Q ss_pred             HHHHhCCCCCCCCCHHHHHHHHHcCCCCCcchHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCC
Q 003185          739 LELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTER  818 (840)
Q Consensus       739 ~ELLTG~~PF~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L~dLI~rCL~~DP~eR  818 (840)
                      |||++|+.||.+.+..+++..|..... .++.                           ..+..+.+||.+||..||.+|
T Consensus       533 yelltG~~Pf~~~~~~~~~~~i~~~~~-~~p~---------------------------~~s~~~~~li~~lL~~dP~~R  584 (674)
T 3pfq_A          533 YEMLAGQAPFEGEDEDELFQSIMEHNV-AYPK---------------------------SMSKEAVAICKGLMTKHPGKR  584 (674)
T ss_dssp             HHHHHSSCSSCCSSHHHHHHHHHSSCC-CCCT---------------------------TSCHHHHHHHHHHSCSSSTTC
T ss_pred             HHHHcCCCCCCCCCHHHHHHHHHhCCC-CCCc---------------------------cCCHHHHHHHHHHccCCHHHC
Confidence            999999999999999999888876532 1221                           124579999999999999999


Q ss_pred             CCH-----HHHHHHHH
Q 003185          819 PTA-----GDLYEMFV  829 (840)
Q Consensus       819 PSa-----~ELLehLe  829 (840)
                      |++     ++|++|..
T Consensus       585 ~~~~~~~~~ei~~h~f  600 (674)
T 3pfq_A          585 LGCGPEGERDIKEHAF  600 (674)
T ss_dssp             TTCSTTHHHHHHSSGG
T ss_pred             CCCCCCcHHHHhcCcc
Confidence            997     89998743


No 215
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00  E-value=4.4e-39  Score=364.30  Aligned_cols=280  Identities=21%  Similarity=0.225  Sum_probs=207.2

Q ss_pred             CCCCceeeeeecccCceEEEEEEE--CCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhC------CCCCcceee
Q 003185          503 SFPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL------RHSCIVEMY  574 (840)
Q Consensus       503 ~~~~y~i~~~LG~G~fG~Vy~a~~--~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L------~HpNIV~l~  574 (840)
                      ...+|++.+.||+|+||.||+|.+  .+..||+|++...     ...    ...+.+|+.+++.+      .|+||++++
T Consensus        95 ~~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~-----~~~----~~~~~~E~~~l~~l~~~~~~~~~~iv~~~  165 (429)
T 3kvw_A           95 VAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE-----KRF----HRQAAEEIRILEHLRKQDKDNTMNVIHML  165 (429)
T ss_dssp             ETTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSC-----HHH----HHHHHHHHHHHHHHHTTCTTSCSCBCCEE
T ss_pred             ccCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCc-----cch----HHHHHHHHHHHHHHhhccccCCcCEEEEE
Confidence            346799999999999999999987  4688999986422     122    23347788888877      577999999


Q ss_pred             eEEecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCC
Q 003185          575 GHKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIK  654 (840)
Q Consensus       575 g~~~~~~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLK  654 (840)
                      +++....              ..+|||||+. ++|.+++..   .....+++..++.|+.||+.||.|||++||||||||
T Consensus       166 ~~~~~~~--------------~~~lv~e~~~-~~L~~~l~~---~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlK  227 (429)
T 3kvw_A          166 ENFTFRN--------------HICMTFELLS-MNLYELIKK---NKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLK  227 (429)
T ss_dssp             EEEEETT--------------EEEEEECCCC-CBHHHHHHH---TTTCCCCHHHHHHHHHHHHHHHHHHHHHTEECSCCS
T ss_pred             eecccCC--------------eEEEEEeccC-CCHHHHHHh---ccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCC
Confidence            9998665              3599999996 699999986   223458999999999999999999999999999999


Q ss_pred             CCcEEEecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHH
Q 003185          655 SENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSY  734 (840)
Q Consensus       655 PeNILLd~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSL  734 (840)
                      |+||||+.++.     ..+||+|||++......             .....||+.|+|||++.+    ..++.++|||||
T Consensus       228 p~NILl~~~~~-----~~vkL~DFG~a~~~~~~-------------~~~~~gt~~y~aPE~~~~----~~~~~~~DiwSl  285 (429)
T 3kvw_A          228 PENILLKQQGR-----SGIKVIDFGSSCYEHQR-------------VYTYIQSRFYRAPEVILG----ARYGMPIDMWSL  285 (429)
T ss_dssp             GGGEEESSTTS-----CCEEECCCTTCEETTCC-------------CCSSCSCGGGCCHHHHHT----BCCCTHHHHHHH
T ss_pred             HHHeEEccCCC-----cceEEeecccceecCCc-------------ccccCCCCCccChHHHhC----CCCCchHHHHhH
Confidence            99999987732     34999999999754321             123469999999999986    568999999999


Q ss_pred             HHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCcchHHhhhccC----cccccccc-------------------CC---
Q 003185          735 GCLLLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSC----HEHEVAQS-------------------GS---  788 (840)
Q Consensus       735 GvIL~ELLTG~~PF~~~~~~el~~~I~~~~~p~l~~~l~~~~~~----~~~~~~~~-------------------~~---  788 (840)
                      ||+||||++|.+||.+.+..+.+..+...........+......    ........                   ..   
T Consensus       286 G~il~elltG~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  365 (429)
T 3kvw_A          286 GCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQKLLDASKRAKNFVSSKGYPRYCTVTTLSDGSVVLNGGRSRRGKLR  365 (429)
T ss_dssp             HHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTBTTHHHHBCTTSCBTTSCEECCCC--CEECCEECTTCCEE
T ss_pred             HHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHhhhhhhhccCCCCCcccccccccccccccccccccchhhcc
Confidence            99999999999999999888777666554222222221110000    00000000                   00   


Q ss_pred             -CCCCc----hhhhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhh
Q 003185          789 -GFEKP----EAELETLSFLVDVFRRCTEENPTERPTAGDLYEMFVAR  831 (840)
Q Consensus       789 -~~~~~----~~~~~~s~~L~dLI~rCL~~DP~eRPSa~ELLehLe~l  831 (840)
                       .....    ......++.+.+||.+||++||.+|||++|+++|.+-.
T Consensus       366 ~~~~~~~~~~~l~~~~~~~~~dli~~~L~~dP~~Rpta~e~L~Hpw~~  413 (429)
T 3kvw_A          366 GPPESREWGNALKGCDDPLFLDFLKQCLEWDPAVRMTPGQALRHPWLR  413 (429)
T ss_dssp             CSTTCSCHHHHTTTCCCHHHHHHHHHHTCSSTTTSCCHHHHHTSTTTC
T ss_pred             CCccchhhHhhccccchHHHHHHHHHHCCCChhhCCCHHHHhCChhhc
Confidence             00000    00011256789999999999999999999999996544


No 216
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00  E-value=2.6e-39  Score=347.40  Aligned_cols=282  Identities=17%  Similarity=0.163  Sum_probs=206.1

Q ss_pred             CCCCCceeeeeecccCceEEEEEEE--CCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeEEec
Q 003185          502 GSFPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKIS  579 (840)
Q Consensus       502 ~~~~~y~i~~~LG~G~fG~Vy~a~~--~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~l~g~~~~  579 (840)
                      +.-++|++.+.||+|+||.||+|..  .+..||+|++...    .....+    .+.+|+.+++.++||||+++++++..
T Consensus        26 i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~----~~~~~~----~~~~E~~~l~~l~h~~iv~~~~~~~~   97 (317)
T 2buj_A           26 IDNKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCH----EQQDRE----EAQREADMHRLFNHPNILRLVAYCLR   97 (317)
T ss_dssp             ETTEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEES----SHHHHH----HHHHHHHHHHTCCCTTBCCCCEEEEE
T ss_pred             ECCeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecC----CHHHHH----HHHHHHHHHhhcCCCCeeeEEEEEEe
Confidence            3456899999999999999999996  6788999987532    223333    34899999999999999999999874


Q ss_pred             CCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCCCcEE
Q 003185          580 SKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENIL  659 (840)
Q Consensus       580 ~~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKPeNIL  659 (840)
                      ...          .....++||||+.+++|.+++..... ....+++..++.++.||+.||.|||++||+||||||+|||
T Consensus        98 ~~~----------~~~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dlkp~NIl  166 (317)
T 2buj_A           98 ERG----------AKHEAWLLLPFFKRGTLWNEIERLKD-KGNFLTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNIL  166 (317)
T ss_dssp             EET----------TEEEEEEEEECCTTCBHHHHHHHHHT-TTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEE
T ss_pred             ccC----------CCceeEEEEEeCCCCcHHHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEE
Confidence            321          12356999999999999999986433 2367999999999999999999999999999999999999


Q ss_pred             EecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHHHHHH
Q 003185          660 IDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLL  739 (840)
Q Consensus       660 Ld~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLGvIL~  739 (840)
                      ++.+       +.+||+|||++.............. .........||+.|+|||++.+.. ...++.++|||||||++|
T Consensus       167 ~~~~-------~~~kl~dfg~~~~~~~~~~~~~~~~-~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~~~~Di~slG~il~  237 (317)
T 2buj_A          167 LGDE-------GQPVLMDLGSMNQACIHVEGSRQAL-TLQDWAAQRCTISYRAPELFSVQS-HCVIDERTDVWSLGCVLY  237 (317)
T ss_dssp             ECTT-------SCEEECCCSSCEESCEEEESHHHHH-HHHHHHHHHSCGGGCCGGGSSCCS-EEEECTHHHHHHHHHHHH
T ss_pred             EcCC-------CCEEEEecCcchhcccccccccccc-cccccccccCCcccCCHhHhccCC-CcCCCchhhHHHHHHHHH
Confidence            9877       4599999999876532111000000 000001235799999999987411 123688999999999999


Q ss_pred             HHHhCCCCCCCCCH--HHHHHHHHcCCCCCcchHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCC
Q 003185          740 ELLTLQVPYMGLSE--LEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTE  817 (840)
Q Consensus       740 ELLTG~~PF~~~~~--~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L~dLI~rCL~~DP~e  817 (840)
                      +|++|+.||.....  ..+...+........                           ....+..+.+||.+||..||.+
T Consensus       238 el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~l~~li~~~l~~dp~~  290 (317)
T 2buj_A          238 AMMFGEGPYDMVFQKGDSVALAVQNQLSIPQ---------------------------SPRHSSALWQLLNSMMTVDPHQ  290 (317)
T ss_dssp             HHHHSSCTTHHHHHTTSCHHHHHHCC--CCC---------------------------CTTSCHHHHHHHHHHTCSSGGG
T ss_pred             HHHhCCCChhhhhcccchhhHHhhccCCCCc---------------------------cccCCHHHHHHHHHHhhcChhh
Confidence            99999999953110  111112221111000                           0123557999999999999999


Q ss_pred             CCCHHHHHHHHHhhcCCCCCC
Q 003185          818 RPTAGDLYEMFVARTSSSISS  838 (840)
Q Consensus       818 RPSa~ELLehLe~l~~~~~s~  838 (840)
                      |||+.+|+++|+.+..+.+..
T Consensus       291 Rps~~~ll~~L~~~~~~~~~~  311 (317)
T 2buj_A          291 RPHIPLLLSQLEALQPPAPGQ  311 (317)
T ss_dssp             SCCHHHHHHHHHHTCCCCCC-
T ss_pred             CCCHHHHHHHhhhcCCCCCCC
Confidence            999999999999998776643


No 217
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00  E-value=6.9e-39  Score=354.71  Aligned_cols=281  Identities=19%  Similarity=0.195  Sum_probs=206.6

Q ss_pred             CCceeeeeecccCceEEEEEEE--CCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeEEecCCC
Q 003185          505 PSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW  582 (840)
Q Consensus       505 ~~y~i~~~LG~G~fG~Vy~a~~--~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~l~g~~~~~~~  582 (840)
                      ++|.+.+.||+|+||.||+|.+  .+..||+|++...  ......    ...+.+|+.+++.++||||+++++++.....
T Consensus        42 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~--~~~~~~----~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~  115 (371)
T 4exu_A           42 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRP--FQSEIF----AKRAYRELLLLKHMQHENVIGLLDVFTPASS  115 (371)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECST--TSSHHH----HHHHHHHHHHHHHCCCTTBCCCSEEECSCSS
T ss_pred             ccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEeccc--ccchhH----HHHHHHHHHHHHhcCCCCchhhhhheeccCC
Confidence            6899999999999999999987  5789999986432  222222    3345899999999999999999999986543


Q ss_pred             CCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCCCcEEEec
Q 003185          583 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL  662 (840)
Q Consensus       583 ~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKPeNILLd~  662 (840)
                      .        ......|+||||+. ++|.+++.       ..+++..++.++.||+.||.|||++||+||||||+|||++.
T Consensus       116 ~--------~~~~~~~lv~e~~~-~~l~~~~~-------~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~  179 (371)
T 4exu_A          116 L--------RNFYDFYLVMPFMQ-TDLQKIMG-------MEFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNE  179 (371)
T ss_dssp             S--------TTCCCCEEEEECCC-EEHHHHTT-------SCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECT
T ss_pred             c--------ccceeEEEEEcccc-ccHHHHhh-------cCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCcCHHHeEECC
Confidence            2        12224599999998 58888763       35999999999999999999999999999999999999987


Q ss_pred             ccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHHHHHHHHH
Q 003185          663 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL  742 (840)
Q Consensus       663 ~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLGvIL~ELL  742 (840)
                      +       +.+||+|||+++......             ....||+.|+|||++.+   ...++.++|||||||++|+|+
T Consensus       180 ~-------~~~kL~Dfg~a~~~~~~~-------------~~~~~t~~y~aPE~~~~---~~~~~~~~DiwslG~il~el~  236 (371)
T 4exu_A          180 D-------CELKILDFGLARHADAEM-------------TGYVVTRWYRAPEVILS---WMHYNQTVDIWSVGCIMAEML  236 (371)
T ss_dssp             T-------CCEEECSTTCC---------------------CTTCCCTTSCHHHHSC---CSCCCTTHHHHHHHHHHHHHH
T ss_pred             C-------CCEEEEecCcccccccCc-------------CCcccCccccCHHHhcC---CCCCCcHHhHHHHHHHHHHHH
Confidence            7       459999999997654321             23468999999999875   246789999999999999999


Q ss_pred             hCCCCCCCCCHHHHHHHHHcCCCCCcchHHhhhccCcccccccc---CCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC
Q 003185          743 TLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQS---GSGFEKPEAELETLSFLVDVFRRCTEENPTERP  819 (840)
Q Consensus       743 TG~~PF~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~---~~~~~~~~~~~~~s~~L~dLI~rCL~~DP~eRP  819 (840)
                      +|+.||.+.+..+....+.........+.+..........+...   .............++.+.+||.+||+.||.+||
T Consensus       237 ~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp  316 (371)
T 4exu_A          237 TGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRL  316 (371)
T ss_dssp             HSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSC
T ss_pred             hCCCCCCCCChHHHHHHHHHHhCCCcHHHHHHhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcC
Confidence            99999999888777766655322222221111100000000000   000001112233467899999999999999999


Q ss_pred             CHHHHHHHHHh
Q 003185          820 TAGDLYEMFVA  830 (840)
Q Consensus       820 Sa~ELLehLe~  830 (840)
                      |+.|+++|..-
T Consensus       317 t~~ell~hp~f  327 (371)
T 4exu_A          317 TAAQALTHPFF  327 (371)
T ss_dssp             CHHHHHTSGGG
T ss_pred             CHHHHhcCccc
Confidence            99999999553


No 218
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00  E-value=4.2e-39  Score=346.73  Aligned_cols=275  Identities=20%  Similarity=0.281  Sum_probs=186.7

Q ss_pred             CCceeeeeecccCceEEEEEEE--CCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCC-CCCcceeeeEEecCC
Q 003185          505 PSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALR-HSCIVEMYGHKISSK  581 (840)
Q Consensus       505 ~~y~i~~~LG~G~fG~Vy~a~~--~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~-HpNIV~l~g~~~~~~  581 (840)
                      .+|++.+.||+|+||.||+|.+  .+..||+|++...    .....+    .+.+|+.+++++. ||||+++++++....
T Consensus        28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~----~~~~~~----~~~~e~~~l~~l~~h~~iv~~~~~~~~~~   99 (337)
T 3ll6_A           28 LRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSN----EEEKNR----AIIQEVCFMKKLSGHPNIVQFCSAASIGK   99 (337)
T ss_dssp             EEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEES----SHHHHH----HHHHHHHHHHHHTTSTTBCCEEEEEEECT
T ss_pred             ceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCC----chHHHH----HHHHHHHHHHHhccCCChhhccccccccc
Confidence            4799999999999999999998  6789999986432    222333    3489999999996 999999999986433


Q ss_pred             CCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCC--eecccCCCCcEE
Q 003185          582 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKH--IMHRDIKSENIL  659 (840)
Q Consensus       582 ~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~g--IVHRDLKPeNIL  659 (840)
                      ..      ........++||||+. |+|.+++.....  ...+++..++.++.||+.||.|||++|  |+||||||+|||
T Consensus       100 ~~------~~~~~~~~~lv~e~~~-g~L~~~l~~~~~--~~~~~~~~~~~i~~qi~~~l~~LH~~~~~ivH~Dikp~NIl  170 (337)
T 3ll6_A          100 EE------SDTGQAEFLLLTELCK-GQLVEFLKKMES--RGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLL  170 (337)
T ss_dssp             TT------STTSSEEEEEEEECCS-EEHHHHHHHHHT--TCSCCHHHHHHHHHHHHHHHHHHHTSSSCCBCCCCCGGGCE
T ss_pred             cc------cccCCceEEEEEEecC-CCHHHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHHhCCCCEEEccCCcccEE
Confidence            21      0112345799999997 699999976322  346999999999999999999999999  999999999999


Q ss_pred             EecccccCCCCCeEEEeecCCccccccccccccccc--CCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHHHH
Q 003185          660 IDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAH--RGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCL  737 (840)
Q Consensus       660 Ld~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~--~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLGvI  737 (840)
                      |+.+       +.+||+|||+++.............  ..........||+.|+|||++... ....++.++|||||||+
T Consensus       171 ~~~~-------~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~-~~~~~~~~~Dv~slG~i  242 (337)
T 3ll6_A          171 LSNQ-------GTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLY-SNFPIGEKQDIWALGCI  242 (337)
T ss_dssp             ECTT-------SCEEBCCCTTCBCCSSCC-------------------------------CC-TTSCSSHHHHHHHHHHH
T ss_pred             ECCC-------CCEEEecCccceeccccCcccccccccccchhhccccCCCCcCChhhhhcc-ccCCCChHHhHHHHHHH
Confidence            9877       4699999999987654322110000  000111234689999999998421 12567899999999999


Q ss_pred             HHHHHhCCCCCCCCCHHHHHHHHHcCCCCCcchHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCC
Q 003185          738 LLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTE  817 (840)
Q Consensus       738 L~ELLTG~~PF~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L~dLI~rCL~~DP~e  817 (840)
                      +|+|++|+.||.......+....   ......                           ...+..+.+||.+||+.||.+
T Consensus       243 l~el~~g~~p~~~~~~~~~~~~~---~~~~~~---------------------------~~~~~~~~~li~~~l~~~p~~  292 (337)
T 3ll6_A          243 LYLLCFRQHPFEDGAKLRIVNGK---YSIPPH---------------------------DTQYTVFHSLIRAMLQVNPEE  292 (337)
T ss_dssp             HHHHHHSSCCC---------------CCCCTT---------------------------CCSSGGGHHHHHHHSCSSGGG
T ss_pred             HHHHHhCCCCCcchhHHHhhcCc---ccCCcc---------------------------cccchHHHHHHHHHccCChhh
Confidence            99999999999765433222111   000000                           011235789999999999999


Q ss_pred             CCCHHHHHHHHHhhcCC
Q 003185          818 RPTAGDLYEMFVARTSS  834 (840)
Q Consensus       818 RPSa~ELLehLe~l~~~  834 (840)
                      |||+.+++++|+.+...
T Consensus       293 Rps~~e~l~~l~~~~~~  309 (337)
T 3ll6_A          293 RLSIAEVVHQLQEIAAA  309 (337)
T ss_dssp             SCCHHHHHHHHHHHHHH
T ss_pred             CcCHHHHHHHHHHHHhc
Confidence            99999999999988754


No 219
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00  E-value=4.3e-39  Score=352.83  Aligned_cols=268  Identities=14%  Similarity=0.101  Sum_probs=202.9

Q ss_pred             CCCceeeeeecccCceEEEEEEEC----------CeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcce-
Q 003185          504 FPSLSSCDEAGKSVSSSLFRCKFG----------SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVE-  572 (840)
Q Consensus       504 ~~~y~i~~~LG~G~fG~Vy~a~~~----------~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~-  572 (840)
                      -++|++.+.||+|+||.||+|.+.          +..+|+|+....         +    .+.+|+.++++++||||++ 
T Consensus        41 ~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~---------~----~~~~E~~~l~~l~h~niv~~  107 (352)
T 2jii_A           41 GRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD---------G----RLFNEQNFFQRAAKPLQVNK  107 (352)
T ss_dssp             SCEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT---------S----THHHHHHHHHHHCCHHHHHH
T ss_pred             CCeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc---------c----hHHHHHHHHHHhcccchhhh
Confidence            478999999999999999999974          678999997532         1    2388999999999999998 


Q ss_pred             --------------eeeEEecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHH
Q 003185          573 --------------MYGHKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAA  638 (840)
Q Consensus       573 --------------l~g~~~~~~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~  638 (840)
                                    +++++....             ...||||||+ +++|.+++...   ....+++..++.++.||+.
T Consensus       108 ~~~~~~~~~~~i~~~~~~~~~~~-------------~~~~lv~e~~-~~~L~~~l~~~---~~~~l~~~~~~~i~~qi~~  170 (352)
T 2jii_A          108 WKKLYSTPLLAIPTCMGFGVHQD-------------KYRFLVLPSL-GRSLQSALDVS---PKHVLSERSVLQVACRLLD  170 (352)
T ss_dssp             HHHHTTCTTCSCCCCCEEEEETT-------------TEEEEEEECC-CEEHHHHHHHS---GGGCCCHHHHHHHHHHHHH
T ss_pred             hhhhccCCccCccchhhccccCC-------------cEEEEEecCC-CcCHHHHHHhC---CcCCCCHHHHHHHHHHHHH
Confidence                          445544321             2469999999 89999999862   1256999999999999999


Q ss_pred             HHHHHHhCCeecccCCCCcEEEecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhc
Q 003185          639 ALVELHSKHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRA  718 (840)
Q Consensus       639 AL~yLHs~gIVHRDLKPeNILLd~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~  718 (840)
                      ||.|||++||+||||||+|||++.++.     ..+||+|||+++.+........   ..........||+.|+|||++.+
T Consensus       171 ~L~~LH~~~ivH~Dikp~NIl~~~~~~-----~~~kl~Dfg~a~~~~~~~~~~~---~~~~~~~~~~gt~~y~aPE~~~~  242 (352)
T 2jii_A          171 ALEFLHENEYVHGNVTAENIFVDPEDQ-----SQVTLAGYGFAFRYCPSGKHVA---YVEGSRSPHEGDLEFISMDLHKG  242 (352)
T ss_dssp             HHHHHHHTTCBCSCCCGGGEEEETTEE-----EEEEECCGGGCBCSSGGGCCCC---CCTTSSCTTCSCTTTCCHHHHTT
T ss_pred             HHHHHHhCCccCCCCCHHHEEEcCCCC-----ceEEEecCcceeeccCCCcccc---ccccccccccCCccccCHHHHcc
Confidence            999999999999999999999997731     3699999999987654322110   01111233479999999999986


Q ss_pred             ccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC--HHHHHHHHHcC--CCCCcchHHhhhccCccccccccCCCCCCch
Q 003185          719 MHKPNLYGLEVDIWSYGCLLLELLTLQVPYMGLS--ELEIHDLIQMG--KRPRLTDELEALGSCHEHEVAQSGSGFEKPE  794 (840)
Q Consensus       719 ~~~~~~~s~kSDVWSLGvIL~ELLTG~~PF~~~~--~~el~~~I~~~--~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~  794 (840)
                          ..++.++|||||||+||||++|+.||....  ...+.......  ..+.+....                     .
T Consensus       243 ----~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------~  297 (352)
T 2jii_A          243 ----CGPSRRSDLQSLGYCMLKWLYGFLPWTNCLPNTEDIMKQKQKFVDKPGPFVGPC---------------------G  297 (352)
T ss_dssp             ----CCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHHHHHHHHHHHHHSCCCEECTT---------------------S
T ss_pred             ----CCCCchhhHHHHHHHHHHHHhCCCCcccCCcCHHHHHHHHHhccCChhhhhhhc---------------------c
Confidence                578999999999999999999999997653  33333332211  111111000                     0


Q ss_pred             hhhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhcCC
Q 003185          795 AELETLSFLVDVFRRCTEENPTERPTAGDLYEMFVARTSS  834 (840)
Q Consensus       795 ~~~~~s~~L~dLI~rCL~~DP~eRPSa~ELLehLe~l~~~  834 (840)
                      .....+..+.+||.+||..||.+|||+++|++.|+.+...
T Consensus       298 ~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~  337 (352)
T 2jii_A          298 HWIRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEALLQD  337 (352)
T ss_dssp             CEECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHH
T ss_pred             ccCCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHHHHHh
Confidence            0112356899999999999999999999999999988754


No 220
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00  E-value=3e-40  Score=366.05  Aligned_cols=268  Identities=13%  Similarity=0.121  Sum_probs=189.3

Q ss_pred             CCCCceeeeeecccCceEEEEEEE--CCeeEEEEEEecccCCCChHHHHHhHHhHHHHH---HHHHhCCCCCcceee---
Q 003185          503 SFPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEV---RMLGALRHSCIVEMY---  574 (840)
Q Consensus       503 ~~~~y~i~~~LG~G~fG~Vy~a~~--~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi---~iL~~L~HpNIV~l~---  574 (840)
                      ..++|++.+.||+|+||.||+|.+  .+..||+|++....... ....+.    +.+|+   .+|++++|||||+++   
T Consensus        71 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~-~~~~~~----~~~E~~~l~~l~~l~hpniv~~~~~~  145 (377)
T 3byv_A           71 RPRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPP-SNAIKQ----MKEEVLRLRLLRGIKNQKQAKVHLRF  145 (377)
T ss_dssp             CCEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CC-TTHHHH----HHHHHHGGGGSTTCCSHHHHHHHHCB
T ss_pred             CCceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccc-hHHHHH----HHHHHHHHHhccccCCHHHHHHHhhh
Confidence            346899999999999999999996  57899999976432222 222333    48999   455556799999998   


Q ss_pred             ----eEEecCCCCC---CCCCCCccccceEEEEEeccCCCCHHHHHHHHhccC--CCCCCHHHHHHHHHHHHHHHHHHHh
Q 003185          575 ----GHKISSKWLP---SADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETG--EKHVSVKLALFIAQDVAAALVELHS  645 (840)
Q Consensus       575 ----g~~~~~~~~p---~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~--~~~ls~~~~~~Ia~QIa~AL~yLHs  645 (840)
                          +++...+...   .............||||||+ +|+|.+++.......  ...+++..++.|+.||+.||+|||+
T Consensus       146 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~  224 (377)
T 3byv_A          146 IFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHH  224 (377)
T ss_dssp             CCCSEEEECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hhhhhhhhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHh
Confidence                5554332100   00000111112469999999 579999998632211  1234458888999999999999999


Q ss_pred             CCeecccCCCCcEEEecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhccc-----
Q 003185          646 KHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMH-----  720 (840)
Q Consensus       646 ~gIVHRDLKPeNILLd~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~-----  720 (840)
                      +||+||||||+||||+.+       +.+||+|||+++......             ....| +.|+|||++.+..     
T Consensus       225 ~~ivHrDikp~NIll~~~-------~~~kL~DFG~a~~~~~~~-------------~~~~g-~~y~aPE~~~~~~~~~~~  283 (377)
T 3byv_A          225 YGLVHTYLRPVDIVLDQR-------GGVFLTGFEHLVRDGARV-------------VSSVS-RGFEPPELEARRATISYH  283 (377)
T ss_dssp             TTEECSCCCGGGEEECTT-------CCEEECCGGGCEETTCEE-------------ECCCC-TTCCCHHHHHHHTSTHHH
T ss_pred             CCeecCCCCHHHEEEcCC-------CCEEEEechhheecCCcc-------------cCCCC-cCccChhhhccccccccc
Confidence            999999999999999977       469999999998643311             22357 9999999998720     


Q ss_pred             --CCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCcchHHhhhccCccccccccCCCCCCchhhhh
Q 003185          721 --KPNLYGLEVDIWSYGCLLLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELE  798 (840)
Q Consensus       721 --~~~~~s~kSDVWSLGvIL~ELLTG~~PF~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~  798 (840)
                        ....++.++|||||||+||||++|+.||.+.........+...                                ...
T Consensus       284 ~~~~~~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~~~~~--------------------------------~~~  331 (377)
T 3byv_A          284 RDRRTLMTFSFDAWALGLVIYWIWCADLPITKDAALGGSEWIFRS--------------------------------CKN  331 (377)
T ss_dssp             HCCEEECCHHHHHHHHHHHHHHHHHSSCCC------CCSGGGGSS--------------------------------CCC
T ss_pred             ccccccCChhhhHHHHHHHHHHHHHCCCCCcccccccchhhhhhh--------------------------------ccC
Confidence              0016899999999999999999999999755432211111100                                012


Q ss_pred             hHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 003185          799 TLSFLVDVFRRCTEENPTERPTAGDLYEMFV  829 (840)
Q Consensus       799 ~s~~L~dLI~rCL~~DP~eRPSa~ELLehLe  829 (840)
                      .++.+.+||.+||..||.+|||+.++++|..
T Consensus       332 ~~~~~~~li~~~L~~dp~~Rpt~~e~l~hp~  362 (377)
T 3byv_A          332 IPQPVRALLEGFLRYPKEDRLLPLQAMETPE  362 (377)
T ss_dssp             CCHHHHHHHHHHTCSSGGGCCCHHHHHTSHH
T ss_pred             CCHHHHHHHHHHcCCCchhCCCHHHHhhChH
Confidence            2457999999999999999999999998743


No 221
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00  E-value=8.6e-39  Score=352.59  Aligned_cols=286  Identities=23%  Similarity=0.230  Sum_probs=202.9

Q ss_pred             CCCCceeeeeecccCceEEEEEEE--CCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCC--------CCCcce
Q 003185          503 SFPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALR--------HSCIVE  572 (840)
Q Consensus       503 ~~~~y~i~~~LG~G~fG~Vy~a~~--~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~--------HpNIV~  572 (840)
                      ..++|++.+.||+|+||.||+|.+  .+..||+|++...     ...    ...+.+|+.+|+.++        ||||++
T Consensus        35 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-----~~~----~~~~~~E~~~l~~l~~~~~~~~~~~~iv~  105 (397)
T 1wak_A           35 FNGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA-----EHY----TETALDEIRLLKSVRNSDPNDPNREMVVQ  105 (397)
T ss_dssp             ETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-----HHH----HHHHHHHHHHHHHHHHSCTTCGGGGGBCC
T ss_pred             cCCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC-----Ccc----hHHHHHHHHHHHHHhhcCCCCCCcceeee
Confidence            347899999999999999999987  5788999996421     222    234489999999996        788999


Q ss_pred             eeeEEecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhC-Ceecc
Q 003185          573 MYGHKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSK-HIMHR  651 (840)
Q Consensus       573 l~g~~~~~~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~-gIVHR  651 (840)
                      +++++.....          .....+|||||+ +++|.+++..   .....+++..++.|+.||+.||.|||++ ||+||
T Consensus       106 ~~~~~~~~~~----------~~~~~~lv~e~~-~~~l~~~~~~---~~~~~~~~~~~~~i~~qi~~aL~~lH~~~givHr  171 (397)
T 1wak_A          106 LLDDFKISGV----------NGTHICMVFEVL-GHHLLKWIIK---SNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHT  171 (397)
T ss_dssp             EEEEEEEEET----------TEEEEEEEECCC-CCBHHHHHHH---TTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECC
T ss_pred             eecceeecCC----------CCceEEEEEecc-CccHHHHHHh---cccCCCCHHHHHHHHHHHHHHHHHHHHhCCEecC
Confidence            9999874321          123569999999 5677777765   2235699999999999999999999999 99999


Q ss_pred             cCCCCcEEEecccc------------------------------------------cCCCCCeEEEeecCCccccccccc
Q 003185          652 DIKSENILIDLERK------------------------------------------KADGKPVVKLCDFDRAVPLRSFLH  689 (840)
Q Consensus       652 DLKPeNILLd~~~~------------------------------------------~~~~~~~vKL~DFGlA~~~~~~~~  689 (840)
                      ||||+||||+.++.                                          .......+||+|||++....... 
T Consensus       172 Dikp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~~-  250 (397)
T 1wak_A          172 DIKPENILLSVNEQYIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHF-  250 (397)
T ss_dssp             CCSGGGEEECCCHHHHHHHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBCS-
T ss_pred             CCCHHHeeEeccchhhhhhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEeccccccccccccC-
Confidence            99999999986630                                          00011369999999998654321 


Q ss_pred             ccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHHcC
Q 003185          690 TCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLTLQVPYMGLS------ELEIHDLIQMG  763 (840)
Q Consensus       690 ~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLGvIL~ELLTG~~PF~~~~------~~el~~~I~~~  763 (840)
                                  ....||+.|+|||++.+    ..++.++|||||||+||||++|+.||...+      .......+...
T Consensus       251 ------------~~~~gt~~y~aPE~~~~----~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~  314 (397)
T 1wak_A          251 ------------TEDIQTRQYRSLEVLIG----SGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIEL  314 (397)
T ss_dssp             ------------CSCCSCGGGCCHHHHHT----SCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHH
T ss_pred             ------------ccCCCCCcccCChhhcC----CCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHh
Confidence                        22468999999999986    568999999999999999999999997654      22233333221


Q ss_pred             CCCCcchHHhhhccCcccccccc-----CCCCC----------CchhhhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 003185          764 KRPRLTDELEALGSCHEHEVAQS-----GSGFE----------KPEAELETLSFLVDVFRRCTEENPTERPTAGDLYEMF  828 (840)
Q Consensus       764 ~~p~l~~~l~~~~~~~~~~~~~~-----~~~~~----------~~~~~~~~s~~L~dLI~rCL~~DP~eRPSa~ELLehL  828 (840)
                      ... .+..+..........+...     .....          ........+..+.+||.+||+.||.+|||+.||++|.
T Consensus       315 ~~~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp  393 (397)
T 1wak_A          315 LGK-VPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRHP  393 (397)
T ss_dssp             HCS-CCHHHHHHCTTGGGTBCTTSSBSSCCCCCCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHTSG
T ss_pred             cCC-CChHHhhcccccccccCCccccccccccCCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhhCc
Confidence            111 1111110000000000000     00000          0011245577899999999999999999999999985


Q ss_pred             H
Q 003185          829 V  829 (840)
Q Consensus       829 e  829 (840)
                      +
T Consensus       394 ~  394 (397)
T 1wak_A          394 W  394 (397)
T ss_dssp             G
T ss_pred             c
Confidence            4


No 222
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00  E-value=1e-38  Score=345.83  Aligned_cols=278  Identities=22%  Similarity=0.293  Sum_probs=203.7

Q ss_pred             CCCCCceeeeeecccCceEEEEEEE------CCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeee
Q 003185          502 GSFPSLSSCDEAGKSVSSSLFRCKF------GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYG  575 (840)
Q Consensus       502 ~~~~~y~i~~~LG~G~fG~Vy~a~~------~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~l~g  575 (840)
                      ....+|++.+.||+|+||.||+|.+      .+..||+|++...    .....+    .+.+|+.++++++||||+++++
T Consensus        38 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~----~~~~~~----~~~~E~~~l~~l~h~~iv~~~~  109 (326)
T 2w1i_A           38 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS----TEEHLR----DFEREIEILKSLQHDNIVKYKG  109 (326)
T ss_dssp             CCGGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSC----CSHHHH----HHHHHHHHHHTCCCTTBCCEEE
T ss_pred             cCHHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccC----CHHHHH----HHHHHHHHHHhCCCCCeeeEEE
Confidence            3456799999999999999999985      5778999986432    222333    3489999999999999999999


Q ss_pred             EEecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCC
Q 003185          576 HKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKS  655 (840)
Q Consensus       576 ~~~~~~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKP  655 (840)
                      ++.....            ...++||||+++++|.+++..    ....+++..++.++.||+.||.|||++||+||||||
T Consensus       110 ~~~~~~~------------~~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp  173 (326)
T 2w1i_A          110 VCYSAGR------------RNLKLIMEYLPYGSLRDYLQK----HKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLAT  173 (326)
T ss_dssp             EECC----------------CCEEEECCCTTCBHHHHHHH----STTSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCG
T ss_pred             EEEecCC------------CceEEEEECCCCCCHHHHHHh----cccCCCHHHHHHHHHHHHHHHHHHHhCCEeccCCCc
Confidence            9875431            135999999999999999986    234689999999999999999999999999999999


Q ss_pred             CcEEEecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHH
Q 003185          656 ENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYG  735 (840)
Q Consensus       656 eNILLd~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLG  735 (840)
                      +|||++.+       +.+||+|||++...........       ......+|..|+|||++.+    ..++.++||||||
T Consensus       174 ~NIli~~~-------~~~kL~Dfg~~~~~~~~~~~~~-------~~~~~~~~~~y~aPE~~~~----~~~~~~~Di~slG  235 (326)
T 2w1i_A          174 RNILVENE-------NRVKIGDFGLTKVLPQDKEYYK-------VKEPGESPIFWYAPESLTE----SKFSVASDVWSFG  235 (326)
T ss_dssp             GGEEEEET-------TEEEECCCTTCEECCSSCSEEE-------CSSCCSCCGGGCCHHHHHH----CEEEHHHHHHHHH
T ss_pred             ceEEEcCC-------CcEEEecCcchhhccccccccc-------cccCCCCceeEECchhhcC----CCCCchhhHHHHH
Confidence            99999877       4699999999987654321100       0122357888999999986    5678999999999


Q ss_pred             HHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCcc-hHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccC
Q 003185          736 CLLLELLTLQVPYMGLSELEIHDLIQMGKRPRLT-DELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEEN  814 (840)
Q Consensus       736 vIL~ELLTG~~PF~~~~~~el~~~I~~~~~p~l~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L~dLI~rCL~~D  814 (840)
                      |++|+|+||..||.... ......+......... ..+...        ......   .......+..+.+||.+||..|
T Consensus       236 ~il~el~tg~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~---~~~~~~~~~~l~~li~~cl~~d  303 (326)
T 2w1i_A          236 VVLYELFTYIEKSKSPP-AEFMRMIGNDKQGQMIVFHLIEL--------LKNNGR---LPRPDGCPDEIYMIMTECWNNN  303 (326)
T ss_dssp             HHHHHHHHTTCGGGSHH-HHHHHHHCTTCCTHHHHHHHHHH--------HHTTCC---CCCCTTCCHHHHHHHHHHSCSS
T ss_pred             HHHHHHHhcCCCCCCCH-HHHHHhhccccchhhhHHHHHHH--------hhcCCC---CCCCCcccHHHHHHHHHHcCCC
Confidence            99999999999985431 1111111111100000 000000        000000   0011234568999999999999


Q ss_pred             CCCCCCHHHHHHHHHhhcC
Q 003185          815 PTERPTAGDLYEMFVARTS  833 (840)
Q Consensus       815 P~eRPSa~ELLehLe~l~~  833 (840)
                      |.+|||+.+|++.|+.+..
T Consensus       304 P~~Rps~~el~~~L~~l~~  322 (326)
T 2w1i_A          304 VNQRPSFRDLALRVDQIRD  322 (326)
T ss_dssp             GGGSCCHHHHHHHHHHHHH
T ss_pred             hhhCcCHHHHHHHHHHHHH
Confidence            9999999999999998753


No 223
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00  E-value=9.3e-39  Score=338.68  Aligned_cols=260  Identities=25%  Similarity=0.353  Sum_probs=198.3

Q ss_pred             CCCCceeeeeecccCceEEEEEEE--CCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeEEecC
Q 003185          503 SFPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISS  580 (840)
Q Consensus       503 ~~~~y~i~~~LG~G~fG~Vy~a~~--~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~l~g~~~~~  580 (840)
                      .+++|.....||+|+||.||+|.+  ++..||+|+.....    ....    +.+.+|+.+++.++||||+++++++...
T Consensus        20 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~----~~~~----~~~~~e~~~l~~l~h~~iv~~~~~~~~~   91 (295)
T 2clq_A           20 EYDENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERD----SRYS----QPLHEEIALHKHLKHKNIVQYLGSFSEN   91 (295)
T ss_dssp             CBCTTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCC----C-------HHHHHHHHHHHTCCCTTBCCEEEEEEET
T ss_pred             cccCCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCc----hHHH----HHHHHHHHHHHhCCCCCEeeEeeEEEeC
Confidence            455666677999999999999998  56788999865331    1122    2348999999999999999999999865


Q ss_pred             CCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCCCcEEE
Q 003185          581 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILI  660 (840)
Q Consensus       581 ~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKPeNILL  660 (840)
                      .              ..++||||+++++|.+++...  .....+++..++.++.||+.||.|||++||+||||||+|||+
T Consensus        92 ~--------------~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~  155 (295)
T 2clq_A           92 G--------------FIKIFMEQVPGGSLSALLRSK--WGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLI  155 (295)
T ss_dssp             T--------------EEEEEEECCSEEEHHHHHHHT--TCCCTTCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE
T ss_pred             C--------------cEEEEEEeCCCCCHHHHHHhh--ccCCCccHHHHHHHHHHHHHHHHHHHhCCEEccCCChhhEEE
Confidence            5              359999999999999999862  223456789999999999999999999999999999999999


Q ss_pred             ecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHHHHHHH
Q 003185          661 DLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLE  740 (840)
Q Consensus       661 d~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLGvIL~E  740 (840)
                      +...      +.+||+|||++.........          .....||+.|+|||++.+..  ..++.++||||||+++|+
T Consensus       156 ~~~~------~~~kl~Dfg~~~~~~~~~~~----------~~~~~~~~~y~aPE~~~~~~--~~~~~~~Di~slG~il~~  217 (295)
T 2clq_A          156 NTYS------GVLKISDFGTSKRLAGINPC----------TETFTGTLQYMAPEIIDKGP--RGYGKAADIWSLGCTIIE  217 (295)
T ss_dssp             ETTT------CCEEECCTTTCEESCC---------------CCCCCCGGGCCHHHHHHGG--GGCSHHHHHHHHHHHHHH
T ss_pred             ECCC------CCEEEeecccccccCCCCCc----------ccccCCCccccChhhhcCCC--CCCCcHHHHHHHHHHHHH
Confidence            8621      46999999999865432111          12346899999999997521  237899999999999999


Q ss_pred             HHhCCCCCCCCCHHH--HHHHHHcCCCCCcchHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCC
Q 003185          741 LLTLQVPYMGLSELE--IHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTER  818 (840)
Q Consensus       741 LLTG~~PF~~~~~~e--l~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L~dLI~rCL~~DP~eR  818 (840)
                      |++|+.||.......  ..........+.++                           ...+..+.+||.+||..||.+|
T Consensus       218 l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~li~~~l~~dp~~R  270 (295)
T 2clq_A          218 MATGKPPFYELGEPQAAMFKVGMFKVHPEIP---------------------------ESMSAEAKAFILKCFEPDPDKR  270 (295)
T ss_dssp             HHHTSCTTGGGSSHHHHHHHHHHHCCCCCCC---------------------------TTSCHHHHHHHHHTTCSSTTTS
T ss_pred             HHHCCCCccCCCchhHHHHhhcccccccccc---------------------------ccCCHHHHHHHHHHccCChhhC
Confidence            999999997543222  11111122222222                           1234578999999999999999


Q ss_pred             CCHHHHHHHHHhh
Q 003185          819 PTAGDLYEMFVAR  831 (840)
Q Consensus       819 PSa~ELLehLe~l  831 (840)
                      ||+.++++|..-.
T Consensus       271 ps~~~ll~~~~~~  283 (295)
T 2clq_A          271 ACANDLLVDEFLK  283 (295)
T ss_dssp             CCHHHHHTSGGGC
T ss_pred             CCHHHHhcChhhh
Confidence            9999999985543


No 224
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00  E-value=5.6e-39  Score=376.56  Aligned_cols=257  Identities=23%  Similarity=0.307  Sum_probs=206.6

Q ss_pred             CCCCCceeeeeecccCceEEEEEEE--CCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeEEec
Q 003185          502 GSFPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKIS  579 (840)
Q Consensus       502 ~~~~~y~i~~~LG~G~fG~Vy~a~~--~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~l~g~~~~  579 (840)
                      ...++|++.+.||+|+||.||+|.+  .+..||+|++.....     ........+.+|+.+|+.++|||||++++++..
T Consensus       181 ~~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~-----~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~  255 (576)
T 2acx_A          181 VTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRI-----KKRKGEAMALNEKQILEKVNSRFVVSLAYAYET  255 (576)
T ss_dssp             CCGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHH-----HHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred             ccccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhh-----hhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEee
Confidence            5667899999999999999999998  578999999754321     111112345899999999999999999999986


Q ss_pred             CCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCCCcEE
Q 003185          580 SKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENIL  659 (840)
Q Consensus       580 ~~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKPeNIL  659 (840)
                      ...              .||||||++||+|..++..   .+...+++..++.++.||+.||.|||++|||||||||+|||
T Consensus       256 ~~~--------------l~lVmEy~~gg~L~~~l~~---~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIvHrDLKPeNIL  318 (576)
T 2acx_A          256 KDA--------------LCLVLTLMNGGDLKFHIYH---MGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENIL  318 (576)
T ss_dssp             SSE--------------EEEEECCCCSCBHHHHHHS---SSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEE
T ss_pred             CCE--------------EEEEEEcCCCCcHHHHHHh---cCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCchheEE
Confidence            553              5999999999999999875   22345999999999999999999999999999999999999


Q ss_pred             EecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHHHHHH
Q 003185          660 IDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLL  739 (840)
Q Consensus       660 Ld~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLGvIL~  739 (840)
                      |+.+       +.+||+|||+++.......           ....+||+.|+|||++.+    ..++.++|||||||+||
T Consensus       319 ld~~-------g~vKL~DFGla~~~~~~~~-----------~~~~~GT~~Y~APEvl~~----~~~~~~~DiwSLGvily  376 (576)
T 2acx_A          319 LDDH-------GHIRISDLGLAVHVPEGQT-----------IKGRVGTVGYMAPEVVKN----ERYTFSPDWWALGCLLY  376 (576)
T ss_dssp             ECTT-------SCEEECCCTTCEECCTTCC-----------EECCCSCGGGCCHHHHTT----CEESSHHHHHHHHHHHH
T ss_pred             EeCC-------CCeEEEecccceecccCcc-----------ccccCCCccccCHHHHcC----CCCCccchHHHHHHHHH
Confidence            9877       4699999999987643221           122469999999999986    56899999999999999


Q ss_pred             HHHhCCCCCCCCC----HHHHHHHHHcCCCCCcchHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCC
Q 003185          740 ELLTLQVPYMGLS----ELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENP  815 (840)
Q Consensus       740 ELLTG~~PF~~~~----~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L~dLI~rCL~~DP  815 (840)
                      ||++|..||.+..    ...+...+..... .++                           ...+..+.+||.+||..||
T Consensus       377 eLltG~~PF~~~~~~~~~~~i~~~i~~~~~-~~p---------------------------~~~s~~~~dLI~~lL~~dP  428 (576)
T 2acx_A          377 EMIAGQSPFQQRKKKIKREEVERLVKEVPE-EYS---------------------------ERFSPQARSLCSQLLCKDP  428 (576)
T ss_dssp             HHHHSSCSSSCSSSCCCHHHHHHHHHHCCC-CCC---------------------------TTSCHHHHHHHHHHTCSSG
T ss_pred             HHHhCCCCCcccccchhHHHHHHHhhcccc-cCC---------------------------ccCCHHHHHHHHHhccCCH
Confidence            9999999997653    3444444443311 111                           1124579999999999999


Q ss_pred             CCCC-----CHHHHHHHHHh
Q 003185          816 TERP-----TAGDLYEMFVA  830 (840)
Q Consensus       816 ~eRP-----Sa~ELLehLe~  830 (840)
                      .+||     +++||++|..-
T Consensus       429 ~~R~g~~~~sa~eil~HpfF  448 (576)
T 2acx_A          429 AERLGCRGGSAREVKEHPLF  448 (576)
T ss_dssp             GGSTTCSSSHHHHHHTSGGG
T ss_pred             HHcCCCCCCCHHHHHhChhh
Confidence            9999     89999998543


No 225
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00  E-value=6.8e-39  Score=358.52  Aligned_cols=292  Identities=20%  Similarity=0.247  Sum_probs=188.6

Q ss_pred             Ccee-eeeecccCceEEEEEEEC----CeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeEEecC
Q 003185          506 SLSS-CDEAGKSVSSSLFRCKFG----SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISS  580 (840)
Q Consensus       506 ~y~i-~~~LG~G~fG~Vy~a~~~----~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~l~g~~~~~  580 (840)
                      .|.+ +++||+|+||.||+|++.    +..||+|++...  ...        ..+.+|+.+|++|+|||||++++++...
T Consensus        21 ~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~--~~~--------~~~~~E~~~l~~l~hpniv~~~~~~~~~   90 (405)
T 3rgf_A           21 LFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGT--GIS--------MSACREIALLRELKHPNVISLQKVFLSH   90 (405)
T ss_dssp             HEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSS--SCC--------HHHHHHHHHHHHCCCTTBCCCCEEEEET
T ss_pred             hhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCC--CCC--------HHHHHHHHHHHhcCCCCeeeEeeEEecC
Confidence            3555 568999999999999964    678999985322  111        1338899999999999999999999653


Q ss_pred             CCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhcc----CCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCCC
Q 003185          581 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSET----GEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSE  656 (840)
Q Consensus       581 ~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~----~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKPe  656 (840)
                      ..            ...||||||+. ++|.+++......    ....+++..++.|+.||+.||.|||++||+||||||+
T Consensus        91 ~~------------~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~Dlkp~  157 (405)
T 3rgf_A           91 AD------------RKVWLLFDYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPA  157 (405)
T ss_dssp             TT------------TEEEEEEECCS-EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGG
T ss_pred             CC------------CeEEEEEeCCC-CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCEeCCCcCHH
Confidence            21            24699999997 5899888643221    1235899999999999999999999999999999999


Q ss_pred             cEEEecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHHH
Q 003185          657 NILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGC  736 (840)
Q Consensus       657 NILLd~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLGv  736 (840)
                      ||||...+.   ..+.+||+|||+++.+......       ........||+.|+|||++.+   ...++.++|||||||
T Consensus       158 NIll~~~~~---~~~~~kl~Dfg~a~~~~~~~~~-------~~~~~~~~gt~~y~aPE~~~~---~~~~~~~~DiwSlG~  224 (405)
T 3rgf_A          158 NILVMGEGP---ERGRVKIADMGFARLFNSPLKP-------LADLDPVVVTFWYRAPELLLG---ARHYTKAIDIWAIGC  224 (405)
T ss_dssp             GEEECCSST---TTTCEEECCTTCCC-----------------------CCCTTCCHHHHTT---CCSCCHHHHHHHHHH
T ss_pred             HeEEecCCC---CCCcEEEEECCCceecCCCCcc-------cccCCCceecCcccCchhhcC---CCcccchhhhHHHHH
Confidence            999954311   2367999999999876532111       011233579999999999975   245899999999999


Q ss_pred             HHHHHHhCCCCCCCCCHH---------HHHHHHHcC-CCCCcchHHhhhccCccc-----cccccC-CCCCCc----hhh
Q 003185          737 LLLELLTLQVPYMGLSEL---------EIHDLIQMG-KRPRLTDELEALGSCHEH-----EVAQSG-SGFEKP----EAE  796 (840)
Q Consensus       737 IL~ELLTG~~PF~~~~~~---------el~~~I~~~-~~p~l~~~l~~~~~~~~~-----~~~~~~-~~~~~~----~~~  796 (840)
                      +||||++|..||.+....         +.+..+... ..+. ...+.........     .+.... ......    ...
T Consensus       225 il~ell~g~~pf~~~~~~~~~~~~~~~~~l~~i~~~~g~p~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  303 (405)
T 3rgf_A          225 IFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPA-DKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHK  303 (405)
T ss_dssp             HHHHHHHSSCTTCCCC------CCCCHHHHHHHHHHHCCCC-TTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTT
T ss_pred             HHHHHHhCCCCCCCccccccccccchHHHHHHHHHhhCCCC-hhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcC
Confidence            999999999999765431         333333222 1111 1111111000000     000000 000000    000


Q ss_pred             hhhHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhcCC
Q 003185          797 LETLSFLVDVFRRCTEENPTERPTAGDLYEMFVARTSS  834 (840)
Q Consensus       797 ~~~s~~L~dLI~rCL~~DP~eRPSa~ELLehLe~l~~~  834 (840)
                      ...+..+.+||.+||..||.+|||++|+++|.+-....
T Consensus       304 ~~~~~~~~~Ll~~~L~~dP~~R~ta~e~L~hp~f~~~~  341 (405)
T 3rgf_A          304 VKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYFLEDP  341 (405)
T ss_dssp             CCTTSHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTSSS
T ss_pred             CCCCHHHHHHHHHHccCCcccCCCHHHHhcChhhccCC
Confidence            01145789999999999999999999999998765544


No 226
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00  E-value=1.1e-38  Score=372.27  Aligned_cols=259  Identities=20%  Similarity=0.268  Sum_probs=206.8

Q ss_pred             CCCCCceeeeeecccCceEEEEEEE--CCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeEEec
Q 003185          502 GSFPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKIS  579 (840)
Q Consensus       502 ~~~~~y~i~~~LG~G~fG~Vy~a~~--~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~l~g~~~~  579 (840)
                      ...++|.+.+.||+|+||.||+|++  .+..||+|+......     ........+.+|+.+|++++||||+++++++..
T Consensus       182 ~~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~-----~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~  256 (543)
T 3c4z_A          182 MGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRL-----KKRKGYQGAMVEKKILAKVHSRFIVSLAYAFET  256 (543)
T ss_dssp             CCGGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHH-----HHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred             CChhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHh-----hhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEee
Confidence            5678999999999999999999998  578999999753321     111112345899999999999999999999986


Q ss_pred             CCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCCCcEE
Q 003185          580 SKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENIL  659 (840)
Q Consensus       580 ~~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKPeNIL  659 (840)
                      ...              +||||||++||+|..++.... .....+++..++.++.||+.||.|||++||+||||||+|||
T Consensus       257 ~~~--------------l~lVmE~~~gg~L~~~l~~~~-~~~~~l~e~~~~~~~~qi~~aL~~LH~~gIvHrDLKP~NIL  321 (543)
T 3c4z_A          257 KTD--------------LCLVMTIMNGGDIRYHIYNVD-EDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVL  321 (543)
T ss_dssp             SSE--------------EEEEECCCTTCBHHHHHHTSS-TTSCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEE
T ss_pred             CCE--------------EEEEEEeccCCCHHHHHHHhh-cccccccHHHHHHHHHHHHHHHHHHHHcCCcccCCChHHEE
Confidence            553              599999999999999987521 11346999999999999999999999999999999999999


Q ss_pred             EecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHHHHHH
Q 003185          660 IDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLL  739 (840)
Q Consensus       660 Ld~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLGvIL~  739 (840)
                      |+.+       +.+||+|||+++.+......          .....||+.|+|||++.+    ..++.++|||||||+||
T Consensus       322 l~~~-------g~vkL~DFGla~~~~~~~~~----------~~~~~GT~~Y~APE~l~~----~~~~~~~DiwSlGvily  380 (543)
T 3c4z_A          322 LDDD-------GNVRISDLGLAVELKAGQTK----------TKGYAGTPGFMAPELLLG----EEYDFSVDYFALGVTLY  380 (543)
T ss_dssp             ECTT-------SCEEECCCTTCEECCTTCCC----------BCCCCSCTTTSCHHHHTT----CCBCTHHHHHHHHHHHH
T ss_pred             EeCC-------CCEEEeecceeeeccCCCcc----------cccccCCccccChhhhcC----CCCChHHhcCcchHHHH
Confidence            9877       46999999999876432111          123479999999999986    67899999999999999


Q ss_pred             HHHhCCCCCCCC----CHHHHHHHHHcCCCCCcchHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCC
Q 003185          740 ELLTLQVPYMGL----SELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENP  815 (840)
Q Consensus       740 ELLTG~~PF~~~----~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L~dLI~rCL~~DP  815 (840)
                      ||++|+.||.+.    ...++...+..... .++                           ...+..+.+||.+||..||
T Consensus       381 elltG~~PF~~~~~~~~~~~~~~~i~~~~~-~~p---------------------------~~~s~~~~~li~~lL~~dP  432 (543)
T 3c4z_A          381 EMIAARGPFRARGEKVENKELKQRVLEQAV-TYP---------------------------DKFSPASKDFCEALLQKDP  432 (543)
T ss_dssp             HHHHSSCSSCCTTCCCCHHHHHHHHHHCCC-CCC---------------------------TTSCHHHHHHHHHHSCSSG
T ss_pred             HHHhCCCCCCCCccchhHHHHHHHHhhccc-CCC---------------------------cccCHHHHHHHHHhccCCH
Confidence            999999999765    33455555544321 111                           1124578999999999999


Q ss_pred             CCCCC-----HHHHHHHHH
Q 003185          816 TERPT-----AGDLYEMFV  829 (840)
Q Consensus       816 ~eRPS-----a~ELLehLe  829 (840)
                      .+||+     +++|++|..
T Consensus       433 ~~R~~~~~~~a~ei~~Hpf  451 (543)
T 3c4z_A          433 EKRLGFRDGSCDGLRTHPL  451 (543)
T ss_dssp             GGSCCCBTTBSHHHHTSGG
T ss_pred             hHCCCCcccCHHHHHcCcc
Confidence            99996     588998743


No 227
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00  E-value=3.2e-38  Score=334.31  Aligned_cols=274  Identities=20%  Similarity=0.287  Sum_probs=195.5

Q ss_pred             CCceeeeeecccCceEEEEEEE--CCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeEEecCCC
Q 003185          505 PSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW  582 (840)
Q Consensus       505 ~~y~i~~~LG~G~fG~Vy~a~~--~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~l~g~~~~~~~  582 (840)
                      ++|++.+.||+|+||.||+|.+  .+..+|+|++...     ....    ..+.+|+.++++++||||+++++++.....
T Consensus         6 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-----~~~~----~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~   76 (303)
T 1zy4_A            6 SDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT-----EEKL----STILSEVMLLASLNHQYVVRYYAAWLERRN   76 (303)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE-----HHHH----HHHHHHHHHHTTCCCTTBCCEEEEEEECCC
T ss_pred             ccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc-----HHHH----HHHHHHHHHHHhcCchHHHHHHHHHHhhcc
Confidence            4799999999999999999997  5788999987432     2223    344899999999999999999999876532


Q ss_pred             CCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCCCcEEEec
Q 003185          583 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL  662 (840)
Q Consensus       583 ~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKPeNILLd~  662 (840)
                      +.. ...........|+||||+++++|.+++..    ....+++..++.++.||+.||+|||++||+||||||+|||++.
T Consensus        77 ~~~-~~~~~~~~~~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dlkp~Nil~~~  151 (303)
T 1zy4_A           77 FVK-PMTAVKKKSTLFIQMEYCENGTLYDLIHS----ENLNQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFIDE  151 (303)
T ss_dssp             CCC-------CEEEEEEEEECCCSCBHHHHHHH----SCGGGCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECT
T ss_pred             hhh-hhcccccCCceEEEEecCCCCCHHHhhhc----cccccchHHHHHHHHHHHHHHHHHHhCCeecccCCHHhEEEcC
Confidence            200 00111123467999999999999999986    2356788999999999999999999999999999999999987


Q ss_pred             ccccCCCCCeEEEeecCCcccccccccccccc----cCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHHHHH
Q 003185          663 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIA----HRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLL  738 (840)
Q Consensus       663 ~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~----~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLGvIL  738 (840)
                      +       +.+||+|||++.............    ...........||+.|+|||++.+   ...++.++|||||||++
T Consensus       152 ~-------~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~---~~~~~~~~Di~slG~il  221 (303)
T 1zy4_A          152 S-------RNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDG---TGHYNEKIDMYSLGIIF  221 (303)
T ss_dssp             T-------SCEEECCCCCCSCTTC-------------------------CTTSCHHHHTS---CSCCCTHHHHHHHHHHH
T ss_pred             C-------CCEEEeeCcchhhcccccchhccccccccccccccccCCCcccccCcccccC---CCCCcchhhHHHHHHHH
Confidence            7       459999999998664321100000    000111234568999999999975   24678999999999999


Q ss_pred             HHHHhCCCCCCCC-CHHHHHHHHHcCCCCCcchHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCC
Q 003185          739 LELLTLQVPYMGL-SELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTE  817 (840)
Q Consensus       739 ~ELLTG~~PF~~~-~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L~dLI~rCL~~DP~e  817 (840)
                      |+|++   ||... ...+....+..... .++..                       .....+..+.+||.+||..||.+
T Consensus       222 ~~l~~---p~~~~~~~~~~~~~~~~~~~-~~~~~-----------------------~~~~~~~~~~~li~~~l~~dp~~  274 (303)
T 1zy4_A          222 FEMIY---PFSTGMERVNILKKLRSVSI-EFPPD-----------------------FDDNKMKVEKKIIRLLIDHDPNK  274 (303)
T ss_dssp             HHHHS---CCSSHHHHHHHHHHHHSTTC-CCCTT-----------------------CCTTTSHHHHHHHHHHTCSSGGG
T ss_pred             HHHHh---ccCCchhHHHHHHhcccccc-ccCcc-----------------------ccccchHHHHHHHHHHHhcCccc
Confidence            99998   55432 33344444433211 11110                       11223457899999999999999


Q ss_pred             CCCHHHHHHHHH
Q 003185          818 RPTAGDLYEMFV  829 (840)
Q Consensus       818 RPSa~ELLehLe  829 (840)
                      |||+.++++|.+
T Consensus       275 Rps~~~ll~h~~  286 (303)
T 1zy4_A          275 RPGARTLLNSGW  286 (303)
T ss_dssp             SCCHHHHHHSSC
T ss_pred             CcCHHHHhCCCC
Confidence            999999999854


No 228
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00  E-value=4.5e-38  Score=341.17  Aligned_cols=281  Identities=18%  Similarity=0.190  Sum_probs=204.3

Q ss_pred             CCCCceeeeeecccCceEEEEEEEC---CeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCC------ccee
Q 003185          503 SFPSLSSCDEAGKSVSSSLFRCKFG---SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSC------IVEM  573 (840)
Q Consensus       503 ~~~~y~i~~~LG~G~fG~Vy~a~~~---~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpN------IV~l  573 (840)
                      .-++|++.+.||+|+||.||+|.+.   +..||+|++..     .....    ..+.+|+.+++.++|++      |+.+
T Consensus        17 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~-----~~~~~----~~~~~E~~~l~~l~~~~~~~~~~~~~~   87 (355)
T 2eu9_A           17 LQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRN-----VGKYR----EAARLEINVLKKIKEKDKENKFLCVLM   87 (355)
T ss_dssp             ETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECS-----CHHHH----HHHHHHHHHHHHHHHHCTTSCSCBCCE
T ss_pred             ecccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEcc-----cccch----hHHHHHHHHHHHHhhcCCCCceeEEEe
Confidence            3578999999999999999999973   36899999642     12222    34488999999997665      8999


Q ss_pred             eeEEecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccC
Q 003185          574 YGHKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDI  653 (840)
Q Consensus       574 ~g~~~~~~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDL  653 (840)
                      ++++....              ..+|||||+ +++|.+++..   .....+++..++.++.||+.||.|||++||+||||
T Consensus        88 ~~~~~~~~--------------~~~lv~e~~-~~~l~~~l~~---~~~~~~~~~~~~~i~~qi~~~L~~lH~~~ivH~Dl  149 (355)
T 2eu9_A           88 SDWFNFHG--------------HMCIAFELL-GKNTFEFLKE---NNFQPYPLPHVRHMAYQLCHALRFLHENQLTHTDL  149 (355)
T ss_dssp             EEEEEETT--------------EEEEEEECC-CCBHHHHHHH---TTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCC
T ss_pred             eeeeeeCC--------------eEEEEEecc-CCChHHHHHh---ccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCC
Confidence            99887655              359999999 5688888765   22346899999999999999999999999999999


Q ss_pred             CCCcEEEecccc------------cCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccC
Q 003185          654 KSENILIDLERK------------KADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHK  721 (840)
Q Consensus       654 KPeNILLd~~~~------------~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~  721 (840)
                      ||+||||+..+.            .....+.+||+|||+++.....             .....||+.|+|||++.+   
T Consensus       150 kp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~-------------~~~~~gt~~y~aPE~~~~---  213 (355)
T 2eu9_A          150 KPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATFDHEH-------------HTTIVATRHYRPPEVILE---  213 (355)
T ss_dssp             CGGGEEESCCCEEEEECCC-CCCEEEESCCCEEECCCTTCEETTSC-------------CCSSCSCGGGCCHHHHTT---
T ss_pred             CHHHEEEecccccccccccccccccccCCCcEEEeecCcccccccc-------------ccCCcCCCcccCCeeeec---
Confidence            999999953210            0012367999999999764321             123469999999999986   


Q ss_pred             CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCcchHHhhhccCccccccccCCCCC----------
Q 003185          722 PNLYGLEVDIWSYGCLLLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFE----------  791 (840)
Q Consensus       722 ~~~~s~kSDVWSLGvIL~ELLTG~~PF~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~----------  791 (840)
                       ..++.++|||||||+||||++|..||.+....+....+.....+ ++..+....... ..+......+.          
T Consensus       214 -~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~-~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~  290 (355)
T 2eu9_A          214 -LGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMMEKILGP-IPSHMIHRTRKQ-KYFYKGGLVWDENSSDGRYVK  290 (355)
T ss_dssp             -CCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCC-CCHHHHHHCSCG-GGEETTEECCCTTSHHHHHHH
T ss_pred             -CCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCC-CcHHHhhhccch-hhhcccccccccccchhcccc
Confidence             66899999999999999999999999988877766555443222 222211110000 00000000000          


Q ss_pred             --------CchhhhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 003185          792 --------KPEAELETLSFLVDVFRRCTEENPTERPTAGDLYEMFV  829 (840)
Q Consensus       792 --------~~~~~~~~s~~L~dLI~rCL~~DP~eRPSa~ELLehLe  829 (840)
                              ........+..+.+||.+||..||.+|||+.++++|..
T Consensus       291 ~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~hp~  336 (355)
T 2eu9_A          291 ENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEALLHPF  336 (355)
T ss_dssp             HHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTTSGG
T ss_pred             ccCCcccccccccchhHHHHHHHHHHHhcCChhhCcCHHHHhcChh
Confidence                    00011233568999999999999999999999999854


No 229
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00  E-value=5.5e-39  Score=353.67  Aligned_cols=262  Identities=14%  Similarity=0.136  Sum_probs=199.2

Q ss_pred             CCCCceeeeeecccCceEEEEEE-------ECCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCC---CCCcce
Q 003185          503 SFPSLSSCDEAGKSVSSSLFRCK-------FGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALR---HSCIVE  572 (840)
Q Consensus       503 ~~~~y~i~~~LG~G~fG~Vy~a~-------~~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~---HpNIV~  572 (840)
                      .-++|.+.+.||+|+||.||+|.       ..+..||+|+....    .   ...    +.+|+.++..++   |+||++
T Consensus        63 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~----~---~~~----~~~e~~~~~~l~~~~~~~iv~  131 (365)
T 3e7e_A           63 GSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA----N---PWE----FYIGTQLMERLKPSMQHMFMK  131 (365)
T ss_dssp             SSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC----C---HHH----HHHHHHHHHHSCGGGGGGBCC
T ss_pred             CCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC----C---hhH----HHHHHHHHHHhhhhhhhhhhh
Confidence            34679999999999999999993       36789999996422    1   122    377888888887   999999


Q ss_pred             eeeEEecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccc
Q 003185          573 MYGHKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRD  652 (840)
Q Consensus       573 l~g~~~~~~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRD  652 (840)
                      +++++...+.              .||||||+++|+|.+++..........+++..++.|+.||+.||+|||++||||||
T Consensus       132 ~~~~~~~~~~--------------~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~ivHrD  197 (365)
T 3e7e_A          132 FYSAHLFQNG--------------SVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCEIIHGD  197 (365)
T ss_dssp             EEEEEECSSC--------------EEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTTTEECCC
T ss_pred             hheeeecCCC--------------cEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeecCC
Confidence            9999987654              49999999999999999875444456799999999999999999999999999999


Q ss_pred             CCCCcEEEecccc----cCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCch
Q 003185          653 IKSENILIDLERK----KADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLE  728 (840)
Q Consensus       653 LKPeNILLd~~~~----~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~k  728 (840)
                      |||+||||+....    .....+.+||+|||+|+.+.......        .....+||+.|||||++.+    ..++.+
T Consensus       198 iKp~NIll~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~~~~--------~~~~~~gt~~y~aPE~~~~----~~~~~~  265 (365)
T 3e7e_A          198 IKPDNFILGNGFLEQDDEDDLSAGLALIDLGQSIDMKLFPKGT--------IFTAKCETSGFQCVEMLSN----KPWNYQ  265 (365)
T ss_dssp             CSGGGEEECGGGTCC------CTTEEECCCTTCEEGGGSCTTE--------EECCSSCTTSCCCHHHHTT----CCBSTH
T ss_pred             CCHHHEEecccccCccccccccCCEEEeeCchhhhhhccCCCc--------eeeeecCCCCCCChHHhcC----CCCCcc
Confidence            9999999987100    01123679999999997654221110        1133469999999999986    568999


Q ss_pred             hhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCcchHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHH
Q 003185          729 VDIWSYGCLLLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFR  808 (840)
Q Consensus       729 SDVWSLGvIL~ELLTG~~PF~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L~dLI~  808 (840)
                      +|||||||+||||+||+.||.......      ..    +.               ....       .....+.+.+++.
T Consensus       266 ~DiwslG~il~elltg~~pf~~~~~~~------~~----~~---------------~~~~-------~~~~~~~~~~~~~  313 (365)
T 3e7e_A          266 IDYFGVAATVYCMLFGTYMKVKNEGGE------CK----PE---------------GLFR-------RLPHLDMWNEFFH  313 (365)
T ss_dssp             HHHHHHHHHHHHHHHSSCCCEEEETTE------EE----EC---------------SCCT-------TCSSHHHHHHHHH
T ss_pred             ccHHHHHHHHHHHHhCCCccccCCCCc------ee----ec---------------hhcc-------ccCcHHHHHHHHH
Confidence            999999999999999999995432100      00    00               0000       0012557889999


Q ss_pred             HhcccCCCCC-CCHHHHHHHHHhhcC
Q 003185          809 RCTEENPTER-PTAGDLYEMFVARTS  833 (840)
Q Consensus       809 rCL~~DP~eR-PSa~ELLehLe~l~~  833 (840)
                      .||+.+|.+| |++.++.+.|+.+..
T Consensus       314 ~~l~~~p~~r~~~~~~l~~~l~~~l~  339 (365)
T 3e7e_A          314 VMLNIPDCHHLPSLDLLRQKLKKVFQ  339 (365)
T ss_dssp             HHHCCCCTTCCCCHHHHHHHHHHHHH
T ss_pred             HHcCCCCCCcchHHHHHHHHHHHHHH
Confidence            9999999999 678888887777654


No 230
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00  E-value=1.3e-38  Score=348.72  Aligned_cols=281  Identities=19%  Similarity=0.186  Sum_probs=205.2

Q ss_pred             CCceeeeeecccCceEEEEEEE--CCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeEEecCCC
Q 003185          505 PSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW  582 (840)
Q Consensus       505 ~~y~i~~~LG~G~fG~Vy~a~~--~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~l~g~~~~~~~  582 (840)
                      ++|.+.+.||+|+||.||+|.+  .+..||+|++...  ......    ...+.+|+.+++.++||||+++++++.....
T Consensus        24 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~----~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~   97 (353)
T 3coi_A           24 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRP--FQSEIF----AKRAYRELLLLKHMQHENVIGLLDVFTPASS   97 (353)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESST--TSSHHH----HHHHHHHHHHHHHCCCTTBCCCSEEECSCSS
T ss_pred             ceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEeccc--ccchHH----HHHHHHHHHHHHhcCCCCcccHhheEecccc
Confidence            6899999999999999999997  5788999986432  222222    3345899999999999999999999876542


Q ss_pred             CCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCCCcEEEec
Q 003185          583 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL  662 (840)
Q Consensus       583 ~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKPeNILLd~  662 (840)
                      .        ......|+||||+. ++|.+++.       ..+++..++.++.||+.||.|||++||+||||||+|||++.
T Consensus        98 ~--------~~~~~~~lv~e~~~-~~l~~~~~-------~~~~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~NIl~~~  161 (353)
T 3coi_A           98 L--------RNFYDFYLVMPFMQ-TDLQKIMG-------LKFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNE  161 (353)
T ss_dssp             G--------GGCCCCEEEEECCS-EEGGGTTT-------SCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECT
T ss_pred             c--------ccceeEEEEecccc-CCHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEeECC
Confidence            1        11224599999997 58887763       35899999999999999999999999999999999999987


Q ss_pred             ccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHHHHHHHHH
Q 003185          663 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL  742 (840)
Q Consensus       663 ~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLGvIL~ELL  742 (840)
                      +       +.+||+|||++......             .....||+.|+|||++.+   ...++.++|||||||++|+|+
T Consensus       162 ~-------~~~kl~Dfg~~~~~~~~-------------~~~~~~t~~y~aPE~~~~---~~~~~~~~Di~slG~il~el~  218 (353)
T 3coi_A          162 D-------CELKILDFGLARHADAE-------------MTGYVVTRWYRAPEVILS---WMHYNQTVDIWSVGCIMAEML  218 (353)
T ss_dssp             T-------CCEEECSTTCTTC---------------------CCSBCCSCHHHHSC---CSCCCTTHHHHHHHHHHHHHH
T ss_pred             C-------CcEEEeecccccCCCCC-------------ccccccCcCcCCHHHHhC---cCCCCchhhHHHHHHHHHHHH
Confidence            7       46999999999765332             122468999999999875   246789999999999999999


Q ss_pred             hCCCCCCCCCHHHHHHHHHcCCCCCcchHHhhhccCccccccc---cCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC
Q 003185          743 TLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQ---SGSGFEKPEAELETLSFLVDVFRRCTEENPTERP  819 (840)
Q Consensus       743 TG~~PF~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~---~~~~~~~~~~~~~~s~~L~dLI~rCL~~DP~eRP  819 (840)
                      +|..||.+.+..+....+.........+.+..........+..   ..............+..+.+||.+||..||.+||
T Consensus       219 ~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rp  298 (353)
T 3coi_A          219 TGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRL  298 (353)
T ss_dssp             HSSCSSBSSCHHHHHHHHHHHHCBCCHHHHTTCSCHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSC
T ss_pred             hCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHHhhHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCC
Confidence            9999999988777666665432111111111100000000000   0000001112234567899999999999999999


Q ss_pred             CHHHHHHHHHh
Q 003185          820 TAGDLYEMFVA  830 (840)
Q Consensus       820 Sa~ELLehLe~  830 (840)
                      |+.++++|..-
T Consensus       299 t~~e~l~hp~f  309 (353)
T 3coi_A          299 TAAQALTHPFF  309 (353)
T ss_dssp             CHHHHHTSGGG
T ss_pred             CHHHHhcCcch
Confidence            99999998553


No 231
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00  E-value=2.8e-39  Score=351.62  Aligned_cols=280  Identities=19%  Similarity=0.229  Sum_probs=210.3

Q ss_pred             CCCCCceeeeeecccCceEEEEEEECCeeEEEEEEecccCCCChHH---------HHHhHHhHHHHHHHHHhCCCCCcce
Q 003185          502 GSFPSLSSCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADE---------IRNFEYSCLGEVRMLGALRHSCIVE  572 (840)
Q Consensus       502 ~~~~~y~i~~~LG~G~fG~Vy~a~~~~~~vAVKI~~lk~~~~~~~~---------~~~f~~~~~rEi~iL~~L~HpNIV~  572 (840)
                      ..+++|++.+.||+|+||.||+|.+.+..||+|++...........         .......+.+|+.++++++||||++
T Consensus        28 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~  107 (348)
T 2pml_X           28 KYINDYRIIRTLNQGKFNKIILCEKDNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLT  107 (348)
T ss_dssp             EEETTEEEEEEEECCSSCCEEEEEETTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCC
T ss_pred             cccCceEEEEEEcCCCCeEEEEEEcCCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcce
Confidence            4578999999999999999999999999999999864432211000         0000134589999999999999999


Q ss_pred             eeeEEecCCCCCCCCCCCccccceEEEEEeccCCCCHHHH------HHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHh-
Q 003185          573 MYGHKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNY------IEKLSETGEKHVSVKLALFIAQDVAAALVELHS-  645 (840)
Q Consensus       573 l~g~~~~~~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~------L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs-  645 (840)
                      +++++....              ..++||||+++++|.++      +..   .....+++..++.++.||+.||.|||+ 
T Consensus       108 ~~~~~~~~~--------------~~~lv~e~~~~~~L~~~~~~~~~l~~---~~~~~~~~~~~~~i~~qi~~~l~~lH~~  170 (348)
T 2pml_X          108 CEGIITNYD--------------EVYIIYEYMENDSILKFDEYFFVLDK---NYTCFIPIQVIKCIIKSVLNSFSYIHNE  170 (348)
T ss_dssp             CSEEEESSS--------------EEEEEEECCTTCBSSEESSSEESSCS---SSCCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEEEEeeCC--------------eEEEEEeccCCCcHHHHHHHhhhhhh---ccccCCCHHHHHHHHHHHHHHHHHHhcc
Confidence            999998654              35999999999999998      432   224679999999999999999999999 


Q ss_pred             CCeecccCCCCcEEEecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCC
Q 003185          646 KHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLY  725 (840)
Q Consensus       646 ~gIVHRDLKPeNILLd~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~  725 (840)
                      +||+||||||+|||++.+       +.+||+|||++.......            .....||+.|+|||++.+   ...+
T Consensus       171 ~~i~H~dl~p~Nil~~~~-------~~~kl~dfg~~~~~~~~~------------~~~~~~~~~y~aPE~~~~---~~~~  228 (348)
T 2pml_X          171 KNICHRDVKPSNILMDKN-------GRVKLSDFGESEYMVDKK------------IKGSRGTYEFMPPEFFSN---ESSY  228 (348)
T ss_dssp             SCEECCCCCGGGEEECTT-------SCEEECCCTTCEECBTTE------------ECSSCSCGGGCCGGGGSS---CCCE
T ss_pred             CCEeecCCChHhEEEcCC-------CcEEEecccccccccccc------------ccCCCCCcCccCchhhcC---CCCC
Confidence            999999999999999877       469999999998754321            123468999999999976   1245


Q ss_pred             Cc-hhhHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHcCCCCCcchHHhhhccCccccccccCCCCCCchhhhhhHHHH
Q 003185          726 GL-EVDIWSYGCLLLELLTLQVPYMGLSE-LEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFL  803 (840)
Q Consensus       726 s~-kSDVWSLGvIL~ELLTG~~PF~~~~~-~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L  803 (840)
                      +. ++|||||||++|+|++|..||..... .++...+..... .++....        .+................+..+
T Consensus       229 ~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~i~~~~~-~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~l  299 (348)
T 2pml_X          229 NGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFNNIRTKNI-EYPLDRN--------HFLYPLTNKKSTCSNNFLSNED  299 (348)
T ss_dssp             EHHHHHHHHHHHHHHHHHHSSCSSCCSSCSHHHHHHHTSCCC-CCCCSSS--------SSTTTTCC--------CCCHHH
T ss_pred             CcchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhccCc-CCccchh--------hhhccccccccccchhhcCHHH
Confidence            55 99999999999999999999988766 666666655432 1221000        0000000000111123346789


Q ss_pred             HHHHHHhcccCCCCCCCHHHHHHHHH
Q 003185          804 VDVFRRCTEENPTERPTAGDLYEMFV  829 (840)
Q Consensus       804 ~dLI~rCL~~DP~eRPSa~ELLehLe  829 (840)
                      .+||.+||..||.+|||+.++++|..
T Consensus       300 ~~li~~~L~~dP~~Rps~~e~l~hp~  325 (348)
T 2pml_X          300 IDFLKLFLRKNPAERITSEDALKHEW  325 (348)
T ss_dssp             HHHHHHHCCSSGGGSCCHHHHHTSGG
T ss_pred             HHHHHHHccCChhhCCCHHHHhcCcc
Confidence            99999999999999999999999854


No 232
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00  E-value=6.9e-38  Score=347.73  Aligned_cols=280  Identities=21%  Similarity=0.247  Sum_probs=206.6

Q ss_pred             CCCCCceeeeeecccCceEEEEEEE--CCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCC-CC-----Cccee
Q 003185          502 GSFPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALR-HS-----CIVEM  573 (840)
Q Consensus       502 ~~~~~y~i~~~LG~G~fG~Vy~a~~--~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~-Hp-----NIV~l  573 (840)
                      ...++|++.+.||+|+||.||+|.+  .+..||+|++...     ..    +...+.+|+.+++.++ |+     +|+++
T Consensus        51 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~-----~~----~~~~~~~e~~~l~~l~~~~~~~~~~iv~~  121 (382)
T 2vx3_A           51 KWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK-----KA----FLNQAQIEVRLLELMNKHDTEMKYYIVHL  121 (382)
T ss_dssp             EETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSS-----HH----HHHHHHHHHHHHHHHHHCSSGGGGGBCCE
T ss_pred             EeeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEecc-----HH----HHHHHHHHHHHHHHHHhcccccceeEEEe
Confidence            4568999999999999999999997  4778999986422     12    2233478899988886 55     49999


Q ss_pred             eeEEecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHH--hCCeecc
Q 003185          574 YGHKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELH--SKHIMHR  651 (840)
Q Consensus       574 ~g~~~~~~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLH--s~gIVHR  651 (840)
                      ++++....              ..+|||||+. ++|.+++..   .....+++..++.++.||+.||.|||  +.|||||
T Consensus       122 ~~~~~~~~--------------~~~lv~e~~~-~~L~~~l~~---~~~~~~~~~~~~~i~~qi~~al~~lH~~~~~ivHr  183 (382)
T 2vx3_A          122 KRHFMFRN--------------HLCLVFEMLS-YNLYDLLRN---TNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHC  183 (382)
T ss_dssp             EEEEEETT--------------EEEEEEECCC-CBHHHHHHH---TTTSCCCHHHHHHHHHHHHHHHHHHTSTTTCEECC
T ss_pred             eeeeccCC--------------ceEEEEecCC-CCHHHHHhh---cCcCCCCHHHHHHHHHHHHHHHHHhccCCCCEEcC
Confidence            99988655              3599999997 599999986   22245899999999999999999999  4699999


Q ss_pred             cCCCCcEEEecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhH
Q 003185          652 DIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDI  731 (840)
Q Consensus       652 DLKPeNILLd~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDV  731 (840)
                      ||||+||||+.+.     .+.+||+|||+++.....             .....||+.|+|||++.+    ..++.++||
T Consensus       184 Dlkp~NIll~~~~-----~~~~kL~DFG~a~~~~~~-------------~~~~~~t~~y~aPE~~~~----~~~~~~~Di  241 (382)
T 2vx3_A          184 DLKPENILLCNPK-----RSAIKIVDFGSSCQLGQR-------------IYQYIQSRFYRSPEVLLG----MPYDLAIDM  241 (382)
T ss_dssp             CCSGGGEEESSTT-----SCCEEECCCTTCEETTCC-------------CCSSCSCGGGCCHHHHTT----CCCCTHHHH
T ss_pred             CCCcccEEEecCC-----CCcEEEEeccCceecccc-------------cccccCCccccChHHHcC----CCCCcHHHH
Confidence            9999999996542     267999999999866432             123468999999999986    568999999


Q ss_pred             HHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCcchHHhhhc-------cCcccccc-----ccCCCCC--------
Q 003185          732 WSYGCLLLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALG-------SCHEHEVA-----QSGSGFE--------  791 (840)
Q Consensus       732 WSLGvIL~ELLTG~~PF~~~~~~el~~~I~~~~~p~l~~~l~~~~-------~~~~~~~~-----~~~~~~~--------  791 (840)
                      |||||+||||++|+.||.+.+..+....+...........+....       ......+.     .......        
T Consensus       242 wSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  321 (382)
T 2vx3_A          242 WSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPPAHILDQAPKARKFFEKLPDGTWNLKKTKDGKREYKPPGTRKLH  321 (382)
T ss_dssp             HHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTCTTHHHHEEECTTSCEEECCCCTTCCCSCCTTCSCHH
T ss_pred             HHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhHHHHHHHHhccccccccccccccccccCCcchhhHH
Confidence            999999999999999999988888777766542222111111100       00000000     0000000        


Q ss_pred             ----------------CchhhhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHHHh
Q 003185          792 ----------------KPEAELETLSFLVDVFRRCTEENPTERPTAGDLYEMFVA  830 (840)
Q Consensus       792 ----------------~~~~~~~~s~~L~dLI~rCL~~DP~eRPSa~ELLehLe~  830 (840)
                                      .........+.+.+||.+||+.||.+|||++|+++|.+-
T Consensus       322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~Rpta~e~L~hp~f  376 (382)
T 2vx3_A          322 NILGVETGGPGGRRAGESGHTVADYLKFKDLILRMLDYDPKTRIQPYYALQHSFF  376 (382)
T ss_dssp             HHHTTTTTSGGGTTTTCTTCCHHHHHHHHHHHHHHTCSCTTTSCCHHHHTTSGGG
T ss_pred             HHhhccccCCCccccccccccchhhHHHHHHHHHhcCCChhhCCCHHHHhcCccc
Confidence                            000112234579999999999999999999999998653


No 233
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00  E-value=6.3e-38  Score=373.57  Aligned_cols=257  Identities=21%  Similarity=0.317  Sum_probs=207.0

Q ss_pred             CCCCceeeeeecccCceEEEEEEEC-----CeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeEE
Q 003185          503 SFPSLSSCDEAGKSVSSSLFRCKFG-----SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHK  577 (840)
Q Consensus       503 ~~~~y~i~~~LG~G~fG~Vy~a~~~-----~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~l~g~~  577 (840)
                      ..++|++.+.||+|+||.||+|.+.     +..+|+|+.  +.. ......    +.+.+|+.+|++++||||+++++++
T Consensus       388 ~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~--~~~-~~~~~~----~~~~~E~~~l~~l~HpnIv~l~~~~  460 (656)
T 2j0j_A          388 QRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTC--KNC-TSDSVR----EKFLQEALTMRQFDHPHIVKLIGVI  460 (656)
T ss_dssp             CGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEEC--SST-TCHHHH----HHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             ccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEe--ccc-CCHHHH----HHHHHHHHHHHhCCCCCCCeEEEEE
Confidence            3467999999999999999999973     234666663  321 122222    3458999999999999999999998


Q ss_pred             ecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCCCc
Q 003185          578 ISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSEN  657 (840)
Q Consensus       578 ~~~~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKPeN  657 (840)
                      ... .              .||||||+++|+|.+++..    ....+++..++.++.||+.||.|||++||+||||||+|
T Consensus       461 ~~~-~--------------~~lv~E~~~~g~L~~~l~~----~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDikp~N  521 (656)
T 2j0j_A          461 TEN-P--------------VWIIMELCTLGELRSFLQV----RKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARN  521 (656)
T ss_dssp             CSS-S--------------CEEEEECCTTCBHHHHHHH----TTTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGG
T ss_pred             ecC-c--------------eEEEEEcCCCCcHHHHHHh----ccCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchHh
Confidence            432 2              3999999999999999975    23468999999999999999999999999999999999


Q ss_pred             EEEecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHHHH
Q 003185          658 ILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCL  737 (840)
Q Consensus       658 ILLd~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLGvI  737 (840)
                      ||++.+       +.+||+|||+++........         ......+|+.|+|||++.+    ..++.++|||||||+
T Consensus       522 ILl~~~-------~~vkL~DFG~a~~~~~~~~~---------~~~~~~~t~~y~aPE~~~~----~~~~~~~DiwSlG~i  581 (656)
T 2j0j_A          522 VLVSSN-------DCVKLGDFGLSRYMEDSTYY---------KASKGKLPIKWMAPESINF----RRFTSASDVWMFGVC  581 (656)
T ss_dssp             EEEEET-------TEEEECCCCCCCSCCC-------------------CCGGGCCHHHHHH----CCCCHHHHHHHHHHH
T ss_pred             EEEeCC-------CCEEEEecCCCeecCCCcce---------eccCCCCCcceeCHHHhcC----CCCCchhhHHHHHHH
Confidence            999977       46999999999876432211         1122357889999999986    678999999999999


Q ss_pred             HHHHHh-CCCCCCCCCHHHHHHHHHcCCCCCcchHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCC
Q 003185          738 LLELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPT  816 (840)
Q Consensus       738 L~ELLT-G~~PF~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L~dLI~rCL~~DP~  816 (840)
                      +|||++ |..||.+....++...+..+.++.++.                           ..+..+.+||.+||..||.
T Consensus       582 l~ellt~g~~Pf~~~~~~~~~~~i~~~~~~~~~~---------------------------~~~~~l~~li~~~l~~dP~  634 (656)
T 2j0j_A          582 MWEILMHGVKPFQGVKNNDVIGRIENGERLPMPP---------------------------NCPPTLYSLMTKCWAYDPS  634 (656)
T ss_dssp             HHHHHTTSCCTTTTCCHHHHHHHHHHTCCCCCCT---------------------------TCCHHHHHHHHHHTCSSGG
T ss_pred             HHHHHHcCCCCCCCCCHHHHHHHHHcCCCCCCCc---------------------------cccHHHHHHHHHHcCCChh
Confidence            999997 999999998888888887765544332                           1245789999999999999


Q ss_pred             CCCCHHHHHHHHHhhc
Q 003185          817 ERPTAGDLYEMFVART  832 (840)
Q Consensus       817 eRPSa~ELLehLe~l~  832 (840)
                      +|||+.+|++.|+.+.
T Consensus       635 ~RPs~~el~~~L~~il  650 (656)
T 2j0j_A          635 RRPRFTELKAQLSTIL  650 (656)
T ss_dssp             GSCCHHHHHHHHHHHH
T ss_pred             HCcCHHHHHHHHHHHH
Confidence            9999999999999875


No 234
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00  E-value=1e-38  Score=345.09  Aligned_cols=266  Identities=23%  Similarity=0.331  Sum_probs=182.3

Q ss_pred             CCCCCceeeeeecccCceEEEEEEEC--CeeEEEEEEecccCCCChHHHHHhHHhHHHHHH-HHHhCCCCCcceeeeEEe
Q 003185          502 GSFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVR-MLGALRHSCIVEMYGHKI  578 (840)
Q Consensus       502 ~~~~~y~i~~~LG~G~fG~Vy~a~~~--~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~-iL~~L~HpNIV~l~g~~~  578 (840)
                      ...++|.+.+.||+|+||.||+|.+.  +..||+|++....   .......    +.+|+. +++.++||||+++++++.
T Consensus        19 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~---~~~~~~~----~~~e~~~~~~~~~h~niv~~~~~~~   91 (327)
T 3aln_A           19 FTAEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTV---DEKEQKQ----LLMDLDVVMRSSDCPYIVQFYGALF   91 (327)
T ss_dssp             CCSCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCC---CHHHHHH----HHHHHHHHHSSCCCTTBCCEEEEEE
T ss_pred             cCHHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeeccc---CchHHHH----HHHHHHHHHHcCCCCcEeeeeeEEE
Confidence            45689999999999999999999984  8899999875331   2222222    256665 677789999999999998


Q ss_pred             cCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhC-CeecccCCCCc
Q 003185          579 SSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSK-HIMHRDIKSEN  657 (840)
Q Consensus       579 ~~~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~-gIVHRDLKPeN  657 (840)
                      ...              ..+|||||+.+ +|.+++..........+++..++.++.||+.||.|||++ ||+||||||+|
T Consensus        92 ~~~--------------~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~ivH~dlkp~N  156 (327)
T 3aln_A           92 REG--------------DCWICMELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLKIIHRDIKPSN  156 (327)
T ss_dssp             CSS--------------EEEEEECCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHSCCCSCCCGGG
T ss_pred             eCC--------------ceEEEEeecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCCEeECCCCHHH
Confidence            654              35999999985 999988754444456799999999999999999999999 99999999999


Q ss_pred             EEEecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHHHH
Q 003185          658 ILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCL  737 (840)
Q Consensus       658 ILLd~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLGvI  737 (840)
                      ||++.+       +.+||+|||+++.......           .....||+.|+|||++........++.++|||||||+
T Consensus       157 Ill~~~-------~~~kl~Dfg~~~~~~~~~~-----------~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~i  218 (327)
T 3aln_A          157 ILLDRS-------GNIKLCDFGISGQLVDSIA-----------KTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGIT  218 (327)
T ss_dssp             EEEETT-------TEEEECCCSSSCC-----------------------------------------CCSHHHHHHHHHH
T ss_pred             EEEcCC-------CCEEEccCCCceecccccc-----------cccCCCCccccCceeeccccCcCCCCchhhHHHHHHH
Confidence            999877       5699999999976643211           1223689999999998532223568899999999999


Q ss_pred             HHHHHhCCCCCCCCCHH-HHHHHHHcCCCCCcchHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCC
Q 003185          738 LLELLTLQVPYMGLSEL-EIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPT  816 (840)
Q Consensus       738 L~ELLTG~~PF~~~~~~-el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L~dLI~rCL~~DP~  816 (840)
                      +|+|++|+.||...... +....+..+..+.++.                       ......+..+.+||.+||..||.
T Consensus       219 l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~l~~li~~~l~~dp~  275 (327)
T 3aln_A          219 LYELATGRFPYPKWNSVFDQLTQVVKGDPPQLSN-----------------------SEEREFSPSFINFVNLCLTKDES  275 (327)
T ss_dssp             HHHHHHSCCCSSCC-------CCCCCSCCCCCCC-----------------------CSSCCCCHHHHHHHHHHTCSSGG
T ss_pred             HHHHHHCCCCCCCcchHHHHHHHHhcCCCCCCCC-----------------------cccccCCHHHHHHHHHHhhCChh
Confidence            99999999999765321 1111111111111110                       00112356899999999999999


Q ss_pred             CCCCHHHHHHHHHh
Q 003185          817 ERPTAGDLYEMFVA  830 (840)
Q Consensus       817 eRPSa~ELLehLe~  830 (840)
                      +|||+.+|++|..-
T Consensus       276 ~Rps~~ell~hp~~  289 (327)
T 3aln_A          276 KRPKYKELLKHPFI  289 (327)
T ss_dssp             GSCCHHHHTTSHHH
T ss_pred             hCcCHHHHHhChHH
Confidence            99999999987543


No 235
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00  E-value=5.6e-38  Score=337.34  Aligned_cols=263  Identities=21%  Similarity=0.305  Sum_probs=196.9

Q ss_pred             CCCceeeeeecccCceEEEEEEE-CCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCC--CCCcceeeeEEecC
Q 003185          504 FPSLSSCDEAGKSVSSSLFRCKF-GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALR--HSCIVEMYGHKISS  580 (840)
Q Consensus       504 ~~~y~i~~~LG~G~fG~Vy~a~~-~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~--HpNIV~l~g~~~~~  580 (840)
                      -.+|++.+.||+|+||.||+|.+ .+..+|+|++....  ......+.    +.+|+.++.+++  ||||+++++++...
T Consensus        27 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~----~~~E~~~l~~l~~~~~~iv~~~~~~~~~  100 (313)
T 3cek_A           27 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEE--ADNQTLDS----YRNEIAYLNKLQQHSDKIIRLYDYEITD  100 (313)
T ss_dssp             TEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSS--CCHHHHHH----HHHHHHHHHHHGGGCTTBCCEEEEEECS
T ss_pred             cceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEecccc--ccccchHH----HHHHHHHHHhccccCCceEEEEEEeecC
Confidence            45699999999999999999987 46789999976543  23333333    489999999997  59999999999865


Q ss_pred             CCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCCCcEEE
Q 003185          581 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILI  660 (840)
Q Consensus       581 ~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKPeNILL  660 (840)
                      ..              .++|||+ .+++|.+++..     ...+++..++.++.||+.||.|||++||+||||||+|||+
T Consensus       101 ~~--------------~~lv~e~-~~~~L~~~l~~-----~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~  160 (313)
T 3cek_A          101 QY--------------IYMVMEC-GNIDLNSWLKK-----KKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI  160 (313)
T ss_dssp             SE--------------EEEEECC-CSEEHHHHHHH-----CSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE
T ss_pred             CE--------------EEEEEec-CCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEE
Confidence            53              5999995 56899999986     3578999999999999999999999999999999999999


Q ss_pred             ecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccC-------CCCCCchhhHHH
Q 003185          661 DLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHK-------PNLYGLEVDIWS  733 (840)
Q Consensus       661 d~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~-------~~~~s~kSDVWS  733 (840)
                      +.        +.+||+|||++.........        .......||+.|+|||++.+...       ...++.++||||
T Consensus       161 ~~--------~~~kL~Dfg~~~~~~~~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~s  224 (313)
T 3cek_A          161 VD--------GMLKLIDFGIANQMQPDTTS--------VVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWS  224 (313)
T ss_dssp             ET--------TEEEECCCSSSCC----------------------CCGGGCCHHHHTTCC----------CCCHHHHHHH
T ss_pred             EC--------CeEEEeeccccccccCcccc--------ccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHH
Confidence            63        36999999999876432211        01123468999999999975211       136789999999


Q ss_pred             HHHHHHHHHhCCCCCCCCC-HHHHHHHHHcC-CCCCcchHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhc
Q 003185          734 YGCLLLELLTLQVPYMGLS-ELEIHDLIQMG-KRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCT  811 (840)
Q Consensus       734 LGvIL~ELLTG~~PF~~~~-~~el~~~I~~~-~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L~dLI~rCL  811 (840)
                      |||++|+|++|..||.... .......+... ....++.                           ..+..+.+||.+||
T Consensus       225 lG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~l~~li~~~l  277 (313)
T 3cek_A          225 LGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPD---------------------------IPEKDLQDVLKCCL  277 (313)
T ss_dssp             HHHHHHHHHHSSCTTTTCCSHHHHHHHHHCTTSCCCCCC---------------------------CSCHHHHHHHHHHT
T ss_pred             HHHHHHHHHhCCCchhhHHHHHHHHHHHHhcccccCCcc---------------------------cchHHHHHHHHHHc
Confidence            9999999999999997653 22333333222 1111110                           11357899999999


Q ss_pred             ccCCCCCCCHHHHHHHHHhhcCCC
Q 003185          812 EENPTERPTAGDLYEMFVARTSSS  835 (840)
Q Consensus       812 ~~DP~eRPSa~ELLehLe~l~~~~  835 (840)
                      ..||.+||++.++++|.+-.....
T Consensus       278 ~~dp~~Rps~~ell~h~~~~~~~~  301 (313)
T 3cek_A          278 KRDPKQRISIPELLAHPYVQIQTH  301 (313)
T ss_dssp             CSSTTTSCCHHHHHTSHHHHCC--
T ss_pred             cCCcccCcCHHHHhcCccccCCCC
Confidence            999999999999999977655443


No 236
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00  E-value=3.9e-38  Score=337.44  Aligned_cols=260  Identities=23%  Similarity=0.346  Sum_probs=186.8

Q ss_pred             CCCCCceeeeeecccCceEEEEEEE--CCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeEEec
Q 003185          502 GSFPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKIS  579 (840)
Q Consensus       502 ~~~~~y~i~~~LG~G~fG~Vy~a~~--~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~l~g~~~~  579 (840)
                      ..+++|++.+.||+|+||.||+|.+  .+..||+|++....   ......   +.+..+..+++.++||||+++++++..
T Consensus        22 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~---~~~~~~~~~~~~~~h~~i~~~~~~~~~   95 (318)
T 2dyl_A           22 AEINDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSG---NKEENK---RILMDLDVVLKSHDCPYIVQCFGTFIT   95 (318)
T ss_dssp             CCGGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTS---CHHHHH---HHHHHHHHHHHTTTCTTBCCEEEEEEC
T ss_pred             hhhccccccceeeecCCeeEEEEEEecCCeEEEEEEecccc---cchHHH---HHHHHHHHHHHhcCCCceeeEEEEEec
Confidence            4678999999999999999999998  57899999975432   112211   222455567888899999999999986


Q ss_pred             CCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhC-CeecccCCCCcE
Q 003185          580 SKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSK-HIMHRDIKSENI  658 (840)
Q Consensus       580 ~~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~-gIVHRDLKPeNI  658 (840)
                      ..              ..+|||||+ ++.+..++..    ....+++..++.++.||+.||.|||++ ||+||||||+||
T Consensus        96 ~~--------------~~~lv~e~~-~~~~~~l~~~----~~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dlkp~Ni  156 (318)
T 2dyl_A           96 NT--------------DVFIAMELM-GTCAEKLKKR----MQGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNI  156 (318)
T ss_dssp             SS--------------EEEEEECCC-SEEHHHHHHH----HTSCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCGGGE
T ss_pred             CC--------------cEEEEEecc-CCcHHHHHHH----hccCCCHHHHHHHHHHHHHHHHHHHhhCCEEeCCCCHHHE
Confidence            54              359999999 5566666553    135689999999999999999999995 999999999999


Q ss_pred             EEecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhccc-CCCCCCchhhHHHHHHH
Q 003185          659 LIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMH-KPNLYGLEVDIWSYGCL  737 (840)
Q Consensus       659 LLd~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~-~~~~~s~kSDVWSLGvI  737 (840)
                      |++.+       +.+||+|||++........           .....||+.|+|||++.... ....++.++|||||||+
T Consensus       157 l~~~~-------~~~kl~dfg~~~~~~~~~~-----------~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~i  218 (318)
T 2dyl_A          157 LLDER-------GQIKLCDFGISGRLVDDKA-----------KDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGIS  218 (318)
T ss_dssp             EECTT-------SCEEECCCTTC-------------------------CCTTCCHHHHC--------CCTHHHHHHHHHH
T ss_pred             EECCC-------CCEEEEECCCchhccCCcc-----------ccccCCCccccChhhcccccccccCCccccchhhHHHH
Confidence            99877       4699999999976543211           12246899999999995321 12467899999999999


Q ss_pred             HHHHHhCCCCCCCC-CHHHHHHHHHcCCCCCcchHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCC
Q 003185          738 LLELLTLQVPYMGL-SELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPT  816 (840)
Q Consensus       738 L~ELLTG~~PF~~~-~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L~dLI~rCL~~DP~  816 (840)
                      +|+|++|+.||... ...+....+.....+.++..                         ...+..+.+||.+||..||.
T Consensus       219 l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~l~~li~~~l~~dp~  273 (318)
T 2dyl_A          219 LVELATGQFPYKNCKTDFEVLTKVLQEEPPLLPGH-------------------------MGFSGDFQSFVKDCLTKDHR  273 (318)
T ss_dssp             HHHHHHSSCTTTTCCSHHHHHHHHHHSCCCCCCSS-------------------------SCCCHHHHHHHHHHTCSCTT
T ss_pred             HHHHHhCCCCCCCCCccHHHHHHHhccCCCCCCcc-------------------------CCCCHHHHHHHHHHccCChh
Confidence            99999999999763 45566666655544333210                         11245789999999999999


Q ss_pred             CCCCHHHHHHHHH
Q 003185          817 ERPTAGDLYEMFV  829 (840)
Q Consensus       817 eRPSa~ELLehLe  829 (840)
                      +||++.+|++|..
T Consensus       274 ~Rps~~~ll~h~~  286 (318)
T 2dyl_A          274 KRPKYNKLLEHSF  286 (318)
T ss_dssp             TSCCHHHHTTSHH
T ss_pred             HCcCHHHHhhCHH
Confidence            9999999999744


No 237
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00  E-value=6.8e-38  Score=360.77  Aligned_cols=269  Identities=19%  Similarity=0.215  Sum_probs=203.2

Q ss_pred             CCCCCCceeeeeecccCceEEEEEEE--CCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcc-eeeeEE
Q 003185          501 PGSFPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIV-EMYGHK  577 (840)
Q Consensus       501 p~~~~~y~i~~~LG~G~fG~Vy~a~~--~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV-~l~g~~  577 (840)
                      +...++|++.+.||+|+||.||+|.+  .+..||||+.......      .    .+.+|+.+++.|+|++++ .+..++
T Consensus         3 ~~i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~------~----~~~~E~~il~~L~~~~~i~~i~~~~   72 (483)
T 3sv0_A            3 PRVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH------P----QLLYESKIYRILQGGTGIPNVRWFG   72 (483)
T ss_dssp             CEETTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCSS------C----CHHHHHHHHHHTTTSTTCCCEEEEE
T ss_pred             CCcCCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEecccccc------H----HHHHHHHHHHHhcCCCCCCeEEEEE
Confidence            45567899999999999999999997  4789999987644321      1    238899999999975544 444444


Q ss_pred             ecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCCCc
Q 003185          578 ISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSEN  657 (840)
Q Consensus       578 ~~~~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKPeN  657 (840)
                      ....              ..+|||||+ +++|.+++..    ....+++..++.|+.||+.||.|||++|||||||||+|
T Consensus        73 ~~~~--------------~~~lvme~~-g~sL~~ll~~----~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~N  133 (483)
T 3sv0_A           73 VEGD--------------YNVLVMDLL-GPSLEDLFNF----CSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDN  133 (483)
T ss_dssp             EETT--------------EEEEEEECC-CCBHHHHHHH----TTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGG
T ss_pred             eeCC--------------EEEEEEECC-CCCHHHHHHh----hcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCcce
Confidence            4333              359999999 8899999975    23569999999999999999999999999999999999


Q ss_pred             EEEecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHHHH
Q 003185          658 ILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCL  737 (840)
Q Consensus       658 ILLd~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLGvI  737 (840)
                      |||+.+.    ..+.+||+|||+++.+........   ..........||+.|+|||++.+    ..++.++|||||||+
T Consensus       134 ILl~~~~----~~~~vkL~DFGla~~~~~~~~~~~---~~~~~~~~~~gt~~Y~aPE~~~~----~~~s~~sDvwSlGvi  202 (483)
T 3sv0_A          134 FLMGLGR----RANQVYIIDFGLAKKYRDTSTHQH---IPYRENKNLTGTARYASVNTHLG----IEQSRRDDLESLGYV  202 (483)
T ss_dssp             EEECCGG----GTTCEEECCCTTCEECBCTTTCCB---CCCCCCCCCCSCTTTCCHHHHTT----CCCCHHHHHHHHHHH
T ss_pred             EEEecCC----CCCeEEEEeCCcceeccCCccccc---cccccccccCCCccccCHHHhcC----CCCChHHHHHHHHHH
Confidence            9995221    125799999999987654322110   11112235679999999999986    678999999999999


Q ss_pred             HHHHHhCCCCCCCCCH---HHHHHHHHcCCCCCcchHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccC
Q 003185          738 LLELLTLQVPYMGLSE---LEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEEN  814 (840)
Q Consensus       738 L~ELLTG~~PF~~~~~---~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L~dLI~rCL~~D  814 (840)
                      ||||++|+.||.+...   .+.+..+...........                       .....+..+.+||.+||..|
T Consensus       203 l~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~-----------------------l~~~~p~~l~~li~~cl~~d  259 (483)
T 3sv0_A          203 LMYFLRGSLPWQGLKAGTKKQKYEKISEKKVATSIEA-----------------------LCRGYPTEFASYFHYCRSLR  259 (483)
T ss_dssp             HHHHHHSSCTTSSCCCSSHHHHHHHHHHHHHHSCHHH-----------------------HHTTSCHHHHHHHHHHHTCC
T ss_pred             HHHHHhCCCCCccccchhHHHHHHHHhhccccccHHH-----------------------HhcCCcHHHHHHHHHHhcCC
Confidence            9999999999987543   333333322211111110                       11223568999999999999


Q ss_pred             CCCCCCHHHHHHHHHhhc
Q 003185          815 PTERPTAGDLYEMFVART  832 (840)
Q Consensus       815 P~eRPSa~ELLehLe~l~  832 (840)
                      |.+||++.+|++.|+.+.
T Consensus       260 P~~RPs~~el~~~L~~l~  277 (483)
T 3sv0_A          260 FDDKPDYSYLKRLFRDLF  277 (483)
T ss_dssp             TTCCCCHHHHHHHHHHHH
T ss_pred             hhhCcCHHHHHHHHHHHH
Confidence            999999999999998874


No 238
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00  E-value=1.2e-38  Score=352.19  Aligned_cols=275  Identities=14%  Similarity=0.084  Sum_probs=181.2

Q ss_pred             CCCceeeeeecccCceEEEEEEE--CCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhC--CCCCcceee-----
Q 003185          504 FPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL--RHSCIVEMY-----  574 (840)
Q Consensus       504 ~~~y~i~~~LG~G~fG~Vy~a~~--~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L--~HpNIV~l~-----  574 (840)
                      ...|.+.+.||+|+||.||+|.+  .+..||+|++...... .....    ..+.+|+.+++.|  +||||++++     
T Consensus        61 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~----~~~~~E~~~~~~l~~~hp~iv~~~~~~~~  135 (371)
T 3q60_A           61 ERKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAEN-SRSEL----ERLHEATFAAARLLGESPEEARDRRRLLL  135 (371)
T ss_dssp             EEEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTT-HHHHH----HHHHHHHHHHHHHHC----------CBCC
T ss_pred             ceeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccc-cccHH----HHHHHHHHHHHHhcccChhhhhhceeEEe
Confidence            34599999999999999999997  5788999997654211 12222    2347785554444  699988855     


Q ss_pred             --eEEecCCCCC---CCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHH------HHHHHHHHHHHHHH
Q 003185          575 --GHKISSKWLP---SADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLA------LFIAQDVAAALVEL  643 (840)
Q Consensus       575 --g~~~~~~~~p---~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~------~~Ia~QIa~AL~yL  643 (840)
                        +++.......   ..+..........||||||++ |+|.+++....    ..+....+      +.++.||+.||+||
T Consensus       136 p~d~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~----~~~~~~~~~~~~vk~~i~~qi~~aL~~L  210 (371)
T 3q60_A          136 PSDAVAVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLD----FVYVFRGDEGILALHILTAQLIRLAANL  210 (371)
T ss_dssp             CCEEEEETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHH----HSCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             eehheecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhc----cccchhhhhhhhhHHHHHHHHHHHHHHH
Confidence              4443322100   000000111245799999998 79999998631    22344444      67789999999999


Q ss_pred             HhCCeecccCCCCcEEEecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCC
Q 003185          644 HSKHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPN  723 (840)
Q Consensus       644 Hs~gIVHRDLKPeNILLd~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~  723 (840)
                      |++||+||||||+||||+.+       +.+||+|||+++.......             ...+|+.|+|||++.+  ...
T Consensus       211 H~~~ivHrDikp~NIll~~~-------~~~kL~DFG~a~~~~~~~~-------------~~~~t~~y~aPE~~~~--~~~  268 (371)
T 3q60_A          211 QSKGLVHGHFTPDNLFIMPD-------GRLMLGDVSALWKVGTRGP-------------ASSVPVTYAPREFLNA--STA  268 (371)
T ss_dssp             HHTTEEETTCSGGGEEECTT-------SCEEECCGGGEEETTCEEE-------------GGGSCGGGCCHHHHTC--SEE
T ss_pred             HHCCCccCcCCHHHEEECCC-------CCEEEEecceeeecCCCcc-------------CccCCcCCcChhhccC--CCC
Confidence            99999999999999999877       4599999999986643211             2357799999999964  114


Q ss_pred             CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCcchHHhhhccCccccccccCCCCCCchhhhhhHHHH
Q 003185          724 LYGLEVDIWSYGCLLLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFL  803 (840)
Q Consensus       724 ~~s~kSDVWSLGvIL~ELLTG~~PF~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L  803 (840)
                      .++.++|||||||+||||++|+.||.+..+....    ........              ....... ........++.+
T Consensus       269 ~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~----~~~~~~~~--------------~~~~~~~-~~~~~~~~~~~~  329 (371)
T 3q60_A          269 TFTHALNAWQLGLSIYRVWCLFLPFGLVTPGIKG----SWKRPSLR--------------VPGTDSL-AFGSCTPLPDFV  329 (371)
T ss_dssp             ECCHHHHHHHHHHHHHHHHHSSCSTTBCCTTCTT----CCCBCCTT--------------SCCCCSC-CCTTSSCCCHHH
T ss_pred             CcCccccHHHHHHHHHHHHhCCCCCCCcCccccc----chhhhhhh--------------hcccccc-chhhccCCCHHH
Confidence            5799999999999999999999999766432100    00000000              0000000 001112346789


Q ss_pred             HHHHHHhcccCCCCCCCHHHHHHHHH
Q 003185          804 VDVFRRCTEENPTERPTAGDLYEMFV  829 (840)
Q Consensus       804 ~dLI~rCL~~DP~eRPSa~ELLehLe  829 (840)
                      .+||.+||+.||.+|||+.++++|.+
T Consensus       330 ~~li~~~L~~dP~~Rpt~~e~l~hp~  355 (371)
T 3q60_A          330 KTLIGRFLNFDRRRRLLPLEAMETPE  355 (371)
T ss_dssp             HHHHHHHTCSSTTTCCCHHHHTTSHH
T ss_pred             HHHHHHHcCCChhhCCCHHHHhcCHH
Confidence            99999999999999999999998754


No 239
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00  E-value=6.1e-38  Score=343.88  Aligned_cols=288  Identities=19%  Similarity=0.225  Sum_probs=204.7

Q ss_pred             CCCCCceeeeeecccCceEEEEEEE--CCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCC-----------CC
Q 003185          502 GSFPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALR-----------HS  568 (840)
Q Consensus       502 ~~~~~y~i~~~LG~G~fG~Vy~a~~--~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~-----------Hp  568 (840)
                      ...++|++.+.||+|+||.||+|.+  .+..||+|++...     ....    ..+.+|+.+++++.           ||
T Consensus        16 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-----~~~~----~~~~~e~~~l~~l~~~~~~~~~~~~~~   86 (373)
T 1q8y_A           16 YKDARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD-----KVYT----EAAEDEIKLLQRVNDADNTKEDSMGAN   86 (373)
T ss_dssp             ETTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-----HHHH----HHHHHHHHHHHHHHHTCCSHHHHHHHT
T ss_pred             ccCCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCC-----ccch----hhhhHHHHHHHHhhcccccchhccccc
Confidence            4567899999999999999999997  6789999997421     2222    23488999998886           89


Q ss_pred             CcceeeeEEecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhC-C
Q 003185          569 CIVEMYGHKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSK-H  647 (840)
Q Consensus       569 NIV~l~g~~~~~~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~-g  647 (840)
                      ||+++++++.....          .....++||||+ +++|.+++...   ....+++..++.++.||+.||.|||++ |
T Consensus        87 ~i~~~~~~~~~~~~----------~~~~~~lv~e~~-~~~L~~~~~~~---~~~~~~~~~~~~i~~qi~~aL~~lH~~~~  152 (373)
T 1q8y_A           87 HILKLLDHFNHKGP----------NGVHVVMVFEVL-GENLLALIKKY---EHRGIPLIYVKQISKQLLLGLDYMHRRCG  152 (373)
T ss_dssp             TBCCCCEEEEEEET----------TEEEEEEEECCC-CEEHHHHHHHT---TTSCCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             hHHHHHHHhhccCC----------CCceEEEEEecC-CCCHHHHHHHh---hccCCcHHHHHHHHHHHHHHHHHHHhcCC
Confidence            99999999875431          123579999999 78999999862   234589999999999999999999998 9


Q ss_pred             eecccCCCCcEEEecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCc
Q 003185          648 IMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGL  727 (840)
Q Consensus       648 IVHRDLKPeNILLd~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~  727 (840)
                      |+||||||+||||+.++. ....+.+||+|||++.......             ....||+.|+|||++.+    ..++.
T Consensus       153 ivH~Dikp~NIll~~~~~-~~~~~~~kl~Dfg~a~~~~~~~-------------~~~~~t~~y~aPE~~~~----~~~~~  214 (373)
T 1q8y_A          153 IIHTDIKPENVLMEIVDS-PENLIQIKIADLGNACWYDEHY-------------TNSIQTREYRSPEVLLG----APWGC  214 (373)
T ss_dssp             EECSCCSGGGEEEEEEET-TTTEEEEEECCCTTCEETTBCC-------------CSCCSCGGGCCHHHHHT----CCCCT
T ss_pred             EEecCCChHHeEEeccCC-CcCcceEEEcccccccccCCCC-------------CCCCCCccccCcHHHhC----CCCCc
Confidence            999999999999975431 1123579999999997664321             22368999999999986    56899


Q ss_pred             hhhHHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHHcCCCCCcchHHhhhccCccc-----cccccCCCCC-----
Q 003185          728 EVDIWSYGCLLLELLTLQVPYMGLS------ELEIHDLIQMGKRPRLTDELEALGSCHEH-----EVAQSGSGFE-----  791 (840)
Q Consensus       728 kSDVWSLGvIL~ELLTG~~PF~~~~------~~el~~~I~~~~~p~l~~~l~~~~~~~~~-----~~~~~~~~~~-----  791 (840)
                      ++|||||||+||||++|..||.+..      .......+..... .++..+.........     ..........     
T Consensus       215 ~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  293 (373)
T 1q8y_A          215 GADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLG-ELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLE  293 (373)
T ss_dssp             HHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHHHHHC-SCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHH
T ss_pred             hHhHHHHHHHHHHHHhCCCCCCCCcccccCChHHHHHHHHHhcC-CCCHHHHhccchhhhhcCCcchhcccccccccchh
Confidence            9999999999999999999997654      2222222222111 112111110000000     0000000000     


Q ss_pred             -----CchhhhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhh
Q 003185          792 -----KPEAELETLSFLVDVFRRCTEENPTERPTAGDLYEMFVAR  831 (840)
Q Consensus       792 -----~~~~~~~~s~~L~dLI~rCL~~DP~eRPSa~ELLehLe~l  831 (840)
                           ........+..+.+||.+||+.||.+|||+.||++|..-.
T Consensus       294 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~  338 (373)
T 1q8y_A          294 DVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWLK  338 (373)
T ss_dssp             HHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHTCGGGT
T ss_pred             hhhhhcccCCcchHHHHHHHHHHHhccCccccCCHHHHhhChhhh
Confidence                 0011235678899999999999999999999999986544


No 240
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00  E-value=2.4e-38  Score=345.77  Aligned_cols=265  Identities=24%  Similarity=0.261  Sum_probs=177.5

Q ss_pred             CCCCCceeee-eecccCceEEEEEEEC--CeeEEEEEEecccCCCChHHHHHhHHhHHHHH-HHHHhCCCCCcceeeeEE
Q 003185          502 GSFPSLSSCD-EAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEV-RMLGALRHSCIVEMYGHK  577 (840)
Q Consensus       502 ~~~~~y~i~~-~LG~G~fG~Vy~a~~~--~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi-~iL~~L~HpNIV~l~g~~  577 (840)
                      ...++|.+.+ .||+|+||.||+|.+.  +..||+|++...     ...        .+|+ ..++.++||||+++++++
T Consensus        25 ~~~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-----~~~--------~~e~~~~~~~~~h~~i~~~~~~~   91 (336)
T 3fhr_A           25 AVTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDS-----PKA--------RQEVDHHWQASGGPHIVCILDVY   91 (336)
T ss_dssp             CGGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESS-----HHH--------HHHHHHHHHHTTSTTBCCEEEEE
T ss_pred             cccceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCc-----HHH--------HHHHHHHHHhcCCCChHHHHHHH
Confidence            3457899965 6999999999999984  789999997421     111        2233 346677899999999998


Q ss_pred             ecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCCCc
Q 003185          578 ISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSEN  657 (840)
Q Consensus       578 ~~~~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKPeN  657 (840)
                      .....          .....+|||||+++|+|.+++..   .....+++..++.++.||+.||.|||++||+||||||+|
T Consensus        92 ~~~~~----------~~~~~~lv~e~~~gg~L~~~l~~---~~~~~l~~~~~~~i~~ql~~~l~~LH~~~ivH~dlkp~N  158 (336)
T 3fhr_A           92 ENMHH----------GKRCLLIIMECMEGGELFSRIQE---RGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPEN  158 (336)
T ss_dssp             EEEET----------TEEEEEEEEECCTTEEHHHHHHT---C-CCCCBHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGG
T ss_pred             hhccC----------CCceEEEEEeccCCCCHHHHHHh---cCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHH
Confidence            75321          12346999999999999999975   223469999999999999999999999999999999999


Q ss_pred             EEEecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHHHH
Q 003185          658 ILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCL  737 (840)
Q Consensus       658 ILLd~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLGvI  737 (840)
                      ||++.++    ..+.+||+|||++.......            .....||+.|+|||++.+    ..++.++|||||||+
T Consensus       159 Ill~~~~----~~~~~kl~Dfg~~~~~~~~~------------~~~~~~t~~y~aPE~~~~----~~~~~~~Di~slG~i  218 (336)
T 3fhr_A          159 LLYTSKE----KDAVLKLTDFGFAKETTQNA------------LQTPCYTPYYVAPEVLGP----EKYDKSCDMWSLGVI  218 (336)
T ss_dssp             EEESCSS----TTCCEEECCCTTCEEC--------------------------------------CHHHHHHHHHHHHHH
T ss_pred             EEEEecC----CCceEEEeccccceeccccc------------cccCCCCcCccChhhhCC----CCCCchhhHHHHHHH
Confidence            9998653    23569999999997654321            123468999999999865    567899999999999


Q ss_pred             HHHHHhCCCCCCCCCHHHHHHHHHcCCCCCcchHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCC
Q 003185          738 LLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTE  817 (840)
Q Consensus       738 L~ELLTG~~PF~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L~dLI~rCL~~DP~e  817 (840)
                      +|+|++|..||...........+.........                   .. ........+..+.+||.+||..||.+
T Consensus       219 l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~-------------------~~-~~~~~~~~~~~~~~li~~~L~~dP~~  278 (336)
T 3fhr_A          219 MYILLCGFPPFYSNTGQAISPGMKRRIRLGQY-------------------GF-PNPEWSEVSEDAKQLIRLLLKTDPTE  278 (336)
T ss_dssp             HHHHHHSSCCC----------------------------------------CC-CTTTSTTCCHHHHHHHHHHSCSSGGG
T ss_pred             HHHHHHCCCCCCCccchhhhhhHHHhhhcccc-------------------cc-CchhhccCCHHHHHHHHHHCCCChhH
Confidence            99999999999766544332211111000000                   00 00111234568999999999999999


Q ss_pred             CCCHHHHHHHHHhhc
Q 003185          818 RPTAGDLYEMFVART  832 (840)
Q Consensus       818 RPSa~ELLehLe~l~  832 (840)
                      |||+.++++|.+-..
T Consensus       279 Rpt~~ell~hp~~~~  293 (336)
T 3fhr_A          279 RLTITQFMNHPWINQ  293 (336)
T ss_dssp             SCCHHHHHHSHHHHT
T ss_pred             CcCHHHHhcCccccc
Confidence            999999999876543


No 241
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00  E-value=1.5e-37  Score=333.47  Aligned_cols=252  Identities=21%  Similarity=0.258  Sum_probs=189.5

Q ss_pred             CCCCCceeeeeecccCceEEEEEEE--CCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhC----CCCCcceeee
Q 003185          502 GSFPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL----RHSCIVEMYG  575 (840)
Q Consensus       502 ~~~~~y~i~~~LG~G~fG~Vy~a~~--~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L----~HpNIV~l~g  575 (840)
                      ...++|++.+.||+|+||.||+|.+  .+..||+|++..........  ......+.+|+.++.++    +||||+++++
T Consensus        28 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~--~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~  105 (312)
T 2iwi_A           28 AFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSP--LSDSVTCPLEVALLWKVGAGGGHPGVIRLLD  105 (312)
T ss_dssp             -----CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC----------CCCCHHHHHHHHHHSSCCCSSBCCEEE
T ss_pred             hhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEeccccccccc--chhhHHHHHHHHHHHhhcccCCCCCeeeEEE
Confidence            3456899999999999999999987  67789999865432211100  01112337899999999    8999999999


Q ss_pred             EEecCCCCCCCCCCCccccceEEEEEec-cCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCC
Q 003185          576 HKISSKWLPSADGNPEHHLLQSAIFMEY-VKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIK  654 (840)
Q Consensus       576 ~~~~~~~~p~~~g~~~~~~~~~~LVmEy-~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLK  654 (840)
                      ++......              ++|||| +.+++|.+++..     ...+++..++.++.||+.||.|||++||+|||||
T Consensus       106 ~~~~~~~~--------------~~v~e~~~~~~~L~~~l~~-----~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlk  166 (312)
T 2iwi_A          106 WFETQEGF--------------MLVLERPLPAQDLFDYITE-----KGPLGEGPSRCFFGQVVAAIQHCHSRGVVHRDIK  166 (312)
T ss_dssp             EC-----C--------------EEEEECCSSEEEHHHHHHH-----HCSCCHHHHHHHHHHHHHHHHHHHHHTEECCCCS
T ss_pred             EEecCCeE--------------EEEEEecCCCCCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCC
Confidence            98766543              999999 788999999986     2468999999999999999999999999999999


Q ss_pred             CCcEEEe-cccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHH
Q 003185          655 SENILID-LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWS  733 (840)
Q Consensus       655 PeNILLd-~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWS  733 (840)
                      |+|||++ .+       +.+||+|||++.......            .....||+.|+|||++.+   ....+.++||||
T Consensus       167 p~Nil~~~~~-------~~~kl~dfg~~~~~~~~~------------~~~~~~~~~y~aPE~~~~---~~~~~~~~Di~s  224 (312)
T 2iwi_A          167 DENILIDLRR-------GCAKLIDFGSGALLHDEP------------YTDFDGTRVYSPPEWISR---HQYHALPATVWS  224 (312)
T ss_dssp             GGGEEEETTT-------TEEEECCCSSCEECCSSC------------BCCCCSCTTTSCHHHHHH---SCBCHHHHHHHH
T ss_pred             hhhEEEeCCC-------CeEEEEEcchhhhcccCc------------ccccCCcccccCceeeec---CCCCCccchHHH
Confidence            9999998 44       569999999998764321            122458999999999976   123356999999


Q ss_pred             HHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCcchHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhccc
Q 003185          734 YGCLLLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEE  813 (840)
Q Consensus       734 LGvIL~ELLTG~~PF~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L~dLI~rCL~~  813 (840)
                      |||++|+|++|+.||....  .    +.... ..++                           ...+..+.+||.+||..
T Consensus       225 lG~il~~l~~g~~pf~~~~--~----~~~~~-~~~~---------------------------~~~~~~~~~li~~~l~~  270 (312)
T 2iwi_A          225 LGILLYDMVCGDIPFERDQ--E----ILEAE-LHFP---------------------------AHVSPDCCALIRRCLAP  270 (312)
T ss_dssp             HHHHHHHHHHSSCSCCSHH--H----HHHTC-CCCC---------------------------TTSCHHHHHHHHHHTCS
T ss_pred             HHHHHHHHHHCCCCCCChH--H----Hhhhc-cCCc---------------------------ccCCHHHHHHHHHHccC
Confidence            9999999999999996431  1    11111 0111                           11245789999999999


Q ss_pred             CCCCCCCHHHHHHHHHh
Q 003185          814 NPTERPTAGDLYEMFVA  830 (840)
Q Consensus       814 DP~eRPSa~ELLehLe~  830 (840)
                      ||.+|||+.++++|..-
T Consensus       271 ~p~~Rps~~e~l~~~~~  287 (312)
T 2iwi_A          271 KPSSRPSLEEILLDPWM  287 (312)
T ss_dssp             STTTSCCHHHHHHSTTT
T ss_pred             ChhhCcCHHHHhcChhh
Confidence            99999999999998553


No 242
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00  E-value=2e-37  Score=335.52  Aligned_cols=252  Identities=22%  Similarity=0.244  Sum_probs=197.0

Q ss_pred             CCCCCceeeeeecccCceEEEEEEE--CCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCC--CCCcceeeeEE
Q 003185          502 GSFPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALR--HSCIVEMYGHK  577 (840)
Q Consensus       502 ~~~~~y~i~~~LG~G~fG~Vy~a~~--~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~--HpNIV~l~g~~  577 (840)
                      ...++|++.+.||+|+||.||+|.+  .+..||+|++.......... . .....+.+|+.++++++  ||||+++++++
T Consensus        40 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~-~-~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~  117 (320)
T 3a99_A           40 PLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGE-L-PNGTRVPMEVVLLKKVSSGFSGVIRLLDWF  117 (320)
T ss_dssp             CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEE-C-TTCCEEEHHHHHHHHHCSSSCSBCCEEEEE
T ss_pred             CccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhh-h-hhhhHHHHHHHHHHhhccCCCCceEEEEEE
Confidence            3467899999999999999999987  67889999976543221100 0 00123378999999996  59999999999


Q ss_pred             ecCCCCCCCCCCCccccceEEEEEeccCC-CCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCCC
Q 003185          578 ISSKWLPSADGNPEHHLLQSAIFMEYVKG-GSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSE  656 (840)
Q Consensus       578 ~~~~~~p~~~g~~~~~~~~~~LVmEy~~g-GSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKPe  656 (840)
                      .....              .++||||+.+ ++|.+++..     ...+++..++.++.||+.||.|||++||+||||||+
T Consensus       118 ~~~~~--------------~~lv~e~~~~~~~L~~~l~~-----~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~  178 (320)
T 3a99_A          118 ERPDS--------------FVLILERPEPVQDLFDFITE-----RGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDE  178 (320)
T ss_dssp             ECSSE--------------EEEEEECCSSEEEHHHHHHH-----HCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGG
T ss_pred             ecCCc--------------EEEEEEcCCCCccHHHHHhc-----cCCCCHHHHHHHHHHHHHHHHHHHHCCcEeCCCCHH
Confidence            86553              5999999976 899999986     256899999999999999999999999999999999


Q ss_pred             cEEEecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHHH
Q 003185          657 NILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGC  736 (840)
Q Consensus       657 NILLd~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLGv  736 (840)
                      |||++.+.      +.+||+|||++.......            .....||+.|+|||++.+   ...++.++|||||||
T Consensus       179 NIll~~~~------~~~kL~Dfg~~~~~~~~~------------~~~~~gt~~y~aPE~~~~---~~~~~~~~Di~slG~  237 (320)
T 3a99_A          179 NILIDLNR------GELKLIDFGSGALLKDTV------------YTDFDGTRVYSPPEWIRY---HRYHGRSAAVWSLGI  237 (320)
T ss_dssp             GEEEETTT------TEEEECCCTTCEECCSSC------------BCCCCSCGGGSCHHHHHH---SCBCHHHHHHHHHHH
T ss_pred             HEEEeCCC------CCEEEeeCcccccccccc------------ccCCCCCccCCChHHhcc---CCCCCccchHHhHHH
Confidence            99998331      469999999998764321            122468999999999976   233478999999999


Q ss_pred             HHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCcchHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCC
Q 003185          737 LLLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPT  816 (840)
Q Consensus       737 IL~ELLTG~~PF~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L~dLI~rCL~~DP~  816 (840)
                      ++|||++|+.||.....      +..... .++                           ...+..+.+||.+||..||.
T Consensus       238 il~el~~g~~pf~~~~~------~~~~~~-~~~---------------------------~~~~~~~~~li~~~l~~dp~  283 (320)
T 3a99_A          238 LLYDMVCGDIPFEHDEE------IIRGQV-FFR---------------------------QRVSSECQHLIRWCLALRPS  283 (320)
T ss_dssp             HHHHHHHSSCSCCSHHH------HHHCCC-CCS---------------------------SCCCHHHHHHHHHHTCSSGG
T ss_pred             HHHHHHHCCCCCCChhh------hhcccc-ccc---------------------------ccCCHHHHHHHHHHccCChh
Confidence            99999999999965321      111111 000                           11245789999999999999


Q ss_pred             CCCCHHHHHHHHH
Q 003185          817 ERPTAGDLYEMFV  829 (840)
Q Consensus       817 eRPSa~ELLehLe  829 (840)
                      +|||+++|++|..
T Consensus       284 ~Rps~~~ll~hp~  296 (320)
T 3a99_A          284 DRPTFEEIQNHPW  296 (320)
T ss_dssp             GSCCHHHHHTSGG
T ss_pred             hCcCHHHHhcCHh
Confidence            9999999999854


No 243
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00  E-value=2.3e-37  Score=351.09  Aligned_cols=258  Identities=22%  Similarity=0.316  Sum_probs=189.1

Q ss_pred             CceeeeeecccCceE-EEEEEECCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhC-CCCCcceeeeEEecCCCC
Q 003185          506 SLSSCDEAGKSVSSS-LFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEMYGHKISSKWL  583 (840)
Q Consensus       506 ~y~i~~~LG~G~fG~-Vy~a~~~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L-~HpNIV~l~g~~~~~~~~  583 (840)
                      +|.+.+.||+|+||+ ||++...+..||||++....       ...+    .+|+.+|+.+ +|||||++++++..... 
T Consensus        25 ~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~-------~~~~----~~E~~~l~~l~~HpnIv~l~~~~~~~~~-   92 (432)
T 3p23_A           25 SFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPEC-------FSFA----DREVQLLRESDEHPNVIRYFCTEKDRQF-   92 (432)
T ss_dssp             EEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTT-------EEEC----HHHHHHHHHSCCCTTBCCEEEEEEETTE-
T ss_pred             EEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHH-------HHHH----HHHHHHHHhccCCCCcCeEEEEEecCCE-
Confidence            589999999999998 55566788999999864221       1122    7899999999 79999999999886553 


Q ss_pred             CCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCCCcEEEecc
Q 003185          584 PSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLE  663 (840)
Q Consensus       584 p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKPeNILLd~~  663 (840)
                                   .||||||+. |+|.+++..    ....+....++.++.||+.||.|||++||+||||||+||||+.+
T Consensus        93 -------------~~lv~E~~~-g~L~~~l~~----~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NIll~~~  154 (432)
T 3p23_A           93 -------------QYIAIELCA-ATLQEYVEQ----KDFAHLGLEPITLLQQTTSGLAHLHSLNIVHRDLKPHNILISMP  154 (432)
T ss_dssp             -------------EEEEEECCS-EEHHHHHHS----SSCCCCSSCHHHHHHHHHHHHHHHHHTTCCCCCCSTTSEEECCC
T ss_pred             -------------EEEEEECCC-CCHHHHHHh----cCCCccchhHHHHHHHHHHHHHHHHHCcCEeCCCCHHHEEEecC
Confidence                         499999997 599999975    22334555678999999999999999999999999999999654


Q ss_pred             cccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHHHHHHHHHh
Q 003185          664 RKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLT  743 (840)
Q Consensus       664 ~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLGvIL~ELLT  743 (840)
                      +.  .+...+||+|||+++.........       .......||+.|+|||++.+.. ...++.++|||||||++|||++
T Consensus       155 ~~--~~~~~~kL~DFG~a~~~~~~~~~~-------~~~~~~~gt~~y~APE~l~~~~-~~~~t~~~DiwSlG~il~ellt  224 (432)
T 3p23_A          155 NA--HGKIKAMISDFGLCKKLAVGRHSF-------SRRSGVPGTEGWIAPEMLSEDC-KENPTYTVDIFSAGCVFYYVIS  224 (432)
T ss_dssp             BT--TTBCCEEECCTTEEECC-------------------CCSCTTSCCGGGTSCC----CCCTHHHHHHHHHHHHHHHT
T ss_pred             CC--CCceeEEEecccceeeccCCCcce-------eeccccCCCcCccChhhhhccc-ccCCCcHHHHHHHHHHHHHHHc
Confidence            21  233569999999998765322110       1123356999999999997421 2456789999999999999999


Q ss_pred             -CCCCCCCCCHHHHHHHHHcCCCCCcchHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHH
Q 003185          744 -LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAG  822 (840)
Q Consensus       744 -G~~PF~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L~dLI~rCL~~DP~eRPSa~  822 (840)
                       |..||...........+.......+.                         .....+..+.+||.+||+.||.+|||+.
T Consensus       225 ~g~~pf~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~~li~~~L~~dP~~Rps~~  279 (432)
T 3p23_A          225 EGSHPFGKSLQRQANILLGACSLDCLH-------------------------PEKHEDVIARELIEKMIAMDPQKRPSAK  279 (432)
T ss_dssp             TSCBTTBSTTTHHHHHHTTCCCCTTSC-------------------------TTCHHHHHHHHHHHHHSCSSGGGSCCHH
T ss_pred             CCCCCcchhhHHHHHHHhccCCccccC-------------------------ccccccHHHHHHHHHHHhCCHhhCCCHH
Confidence             99999665444333222211111100                         0112355688999999999999999999


Q ss_pred             HHHHHH
Q 003185          823 DLYEMF  828 (840)
Q Consensus       823 ELLehL  828 (840)
                      +|++|.
T Consensus       280 evl~hp  285 (432)
T 3p23_A          280 HVLKHP  285 (432)
T ss_dssp             HHHTST
T ss_pred             HHHhCc
Confidence            999874


No 244
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00  E-value=1.6e-36  Score=343.64  Aligned_cols=272  Identities=21%  Similarity=0.289  Sum_probs=188.6

Q ss_pred             CCCC-ceeeeeecccCceEEEEE-EECCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhC-CCCCcceeeeEEec
Q 003185          503 SFPS-LSSCDEAGKSVSSSLFRC-KFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEMYGHKIS  579 (840)
Q Consensus       503 ~~~~-y~i~~~LG~G~fG~Vy~a-~~~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L-~HpNIV~l~g~~~~  579 (840)
                      .+.+ |.+.+.||+|+||+||.+ ...+..||||+.....       .    ..+.+|+.+|+++ +|||||++++++..
T Consensus        12 ~l~~~~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~~-------~----~~~~~E~~~l~~l~~HpnIv~~~~~~~~   80 (434)
T 2rio_A           12 SLKNLVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDF-------C----DIALMEIKLLTESDDHPNVIRYYCSETT   80 (434)
T ss_dssp             SCSSCEEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGGG-------H----HHHHHHHHHHHHHTTSTTBCCEEEEEEC
T ss_pred             hhhheeeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHHH-------H----HHHHHHHHHHHhccCCCCcCeEEEEEec
Confidence            3444 456788999999999754 4578999999875321       1    2337899999886 79999999999876


Q ss_pred             CCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCC--CCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCCCc
Q 003185          580 SKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGE--KHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSEN  657 (840)
Q Consensus       580 ~~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~--~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKPeN  657 (840)
                      ..              ..||||||+. |+|.+++........  ....+..++.++.||+.||+|||++||+||||||+|
T Consensus        81 ~~--------------~~~lv~E~~~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDLkp~N  145 (434)
T 2rio_A           81 DR--------------FLYIALELCN-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQN  145 (434)
T ss_dssp             SS--------------EEEEEECCCS-EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHTTEECCCCSGGG
T ss_pred             CC--------------eEEEEEecCC-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHCCccccCCChHh
Confidence            55              3599999996 699999975211100  011233467899999999999999999999999999


Q ss_pred             EEEecccc------cCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhccc---CCCCCCch
Q 003185          658 ILIDLERK------KADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMH---KPNLYGLE  728 (840)
Q Consensus       658 ILLd~~~~------~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~---~~~~~s~k  728 (840)
                      |||+.++.      .......+||+|||+++..........      .......||+.|+|||++.+..   ....++.+
T Consensus       146 ILl~~~~~~~~~~~~~~~~~~~kL~DFG~a~~~~~~~~~~~------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~  219 (434)
T 2rio_A          146 ILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFR------TNLNNPSGTSGWRAPELLEESNNLQTKRRLTRS  219 (434)
T ss_dssp             EEEECCHHHHSCCTTCCCSCEEEECCCTTCEECCC--------------------CCTTSCHHHHSCCCTTSCCCCCCTH
T ss_pred             EEEecCcccccccccCCCceEEEEcccccceecCCCCccce------eeecCCCCCCCccCHHHhccccccccccCcchh
Confidence            99986531      112346799999999987654321100      0112346999999999997521   12568999


Q ss_pred             hhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHcCCCCCcchHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHH
Q 003185          729 VDIWSYGCLLLELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVF  807 (840)
Q Consensus       729 SDVWSLGvIL~ELLT-G~~PF~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L~dLI  807 (840)
                      +|||||||++|||+| |..||.......  ..+...... ++..                    ........+..+.+||
T Consensus       220 ~DiwSlG~il~ellt~g~~Pf~~~~~~~--~~i~~~~~~-~~~~--------------------~~~~~~~~~~~~~~li  276 (434)
T 2rio_A          220 IDIFSMGCVFYYILSKGKHPFGDKYSRE--SNIIRGIFS-LDEM--------------------KCLHDRSLIAEATDLI  276 (434)
T ss_dssp             HHHHHHHHHHHHHHTTSCCTTCSTTTHH--HHHHHTCCC-CCCC--------------------TTCCCHHHHHHHHHHH
T ss_pred             hhhHhHHHHHHHHHhCCCCCCCCchhhH--HHHhcCCCC-cccc--------------------cccccccchHHHHHHH
Confidence            999999999999999 999997654333  122222110 0000                    0001123467899999


Q ss_pred             HHhcccCCCCCCCHHHHHHHHH
Q 003185          808 RRCTEENPTERPTAGDLYEMFV  829 (840)
Q Consensus       808 ~rCL~~DP~eRPSa~ELLehLe  829 (840)
                      .+||+.||.+|||+.+|++|..
T Consensus       277 ~~~L~~dP~~Rps~~eil~hp~  298 (434)
T 2rio_A          277 SQMIDHDPLKRPTAMKVLRHPL  298 (434)
T ss_dssp             HHHTCSSGGGSCCHHHHHTSGG
T ss_pred             HHHhhCChhhCCCHHHHHhCCc
Confidence            9999999999999999998754


No 245
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00  E-value=6.9e-36  Score=319.75  Aligned_cols=245  Identities=21%  Similarity=0.203  Sum_probs=182.4

Q ss_pred             CCCCCceee-eeecccCceEEEEEEE--CCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHH-HhCCCCCcceeeeEE
Q 003185          502 GSFPSLSSC-DEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRML-GALRHSCIVEMYGHK  577 (840)
Q Consensus       502 ~~~~~y~i~-~~LG~G~fG~Vy~a~~--~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL-~~L~HpNIV~l~g~~  577 (840)
                      ..+++|.+. +.||+|+||.||+|.+  .+..||+|++...         ..    +.+|+.++ +.++||||+++++++
T Consensus        14 ~~~~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---------~~----~~~e~~~~~~~~~h~~i~~~~~~~   80 (299)
T 3m2w_A           14 AIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC---------PK----ARREVELHWRASQCPHIVRIVDVY   80 (299)
T ss_dssp             CGGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS---------HH----HHHHHHHHHHHTTSTTBCCEEEEE
T ss_pred             ccccchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEeccc---------HH----HHHHHHHHHHhccCCCchhHHhhh
Confidence            456889888 7899999999999998  5778999986421         12    27788887 556899999999998


Q ss_pred             ecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCCCc
Q 003185          578 ISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSEN  657 (840)
Q Consensus       578 ~~~~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKPeN  657 (840)
                      .....          .....+|||||+++++|.+++..   .....+++..++.++.||+.||.|||++||+||||||+|
T Consensus        81 ~~~~~----------~~~~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~N  147 (299)
T 3m2w_A           81 ENLYA----------GRKCLLIVMECLDGGELFSRIQD---RGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPEN  147 (299)
T ss_dssp             EEEET----------TEEEEEEEECCCCSCBHHHHHHH---CTTCCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGG
T ss_pred             hhhcC----------CCceEEEEEeecCCCcHHHHHHh---ccCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHH
Confidence            75110          12246999999999999999986   233469999999999999999999999999999999999


Q ss_pred             EEEecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHHHH
Q 003185          658 ILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCL  737 (840)
Q Consensus       658 ILLd~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLGvI  737 (840)
                      ||++..+    ..+.+||+|||++.....                                    ..++.++|||||||+
T Consensus       148 il~~~~~----~~~~~kl~Dfg~a~~~~~------------------------------------~~~~~~~DiwslG~i  187 (299)
T 3m2w_A          148 LLYTSKR----PNAILKLTDFGFAKETTG------------------------------------EKYDKSCDMWSLGVI  187 (299)
T ss_dssp             EEESSSS----TTCCEEECCCTTCEECTT------------------------------------CGGGGHHHHHHHHHH
T ss_pred             EEEecCC----CCCcEEEecccccccccc------------------------------------ccCCchhhHHHHHHH
Confidence            9998742    125799999999854311                                    234679999999999


Q ss_pred             HHHHHhCCCCCCCCCHHHHHHHHHcCCCCCcchHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCC
Q 003185          738 LLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTE  817 (840)
Q Consensus       738 L~ELLTG~~PF~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L~dLI~rCL~~DP~e  817 (840)
                      +|||++|..||.+.........+.......                    ............+..+.+||.+||..||.+
T Consensus       188 l~el~tg~~pf~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~li~~~l~~dP~~  247 (299)
T 3m2w_A          188 MYILLCGYPPFYSNHGLAISPGMKTRIRMG--------------------QYEFPNPEWSEVSEEVKMLIRNLLKTEPTQ  247 (299)
T ss_dssp             HHHHHHSSCSCCC-------CCSCCSSCTT--------------------CCSSCHHHHTTSCHHHHHHHHHHTCSSTTT
T ss_pred             HHHHHHCCCCCCCCcchhhhHHHHHHHhhc--------------------cccCCchhcccCCHHHHHHHHHHcccChhh
Confidence            999999999997665433221111110000                    000011112335678999999999999999


Q ss_pred             CCCHHHHHHHHHhhc
Q 003185          818 RPTAGDLYEMFVART  832 (840)
Q Consensus       818 RPSa~ELLehLe~l~  832 (840)
                      |||+.++++|..-..
T Consensus       248 Rps~~e~l~hp~~~~  262 (299)
T 3m2w_A          248 RMTITEFMNHPWIMQ  262 (299)
T ss_dssp             SCCHHHHHTSHHHHT
T ss_pred             CCCHHHHhcChhhcc
Confidence            999999999976543


No 246
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=100.00  E-value=1.6e-37  Score=337.92  Aligned_cols=274  Identities=16%  Similarity=0.099  Sum_probs=189.5

Q ss_pred             CCCCceeeeeecccCceEEEEEEECCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCC---------CCCccee
Q 003185          503 SFPSLSSCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALR---------HSCIVEM  573 (840)
Q Consensus       503 ~~~~y~i~~~LG~G~fG~Vy~a~~~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~---------HpNIV~l  573 (840)
                      ..++|++.+.||+|+||.||+|++++..||+|++................+.+.+|+.+|+.|+         |||||++
T Consensus        18 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l   97 (336)
T 2vuw_A           18 PTEKLQRCEKIGEGVFGEVFQTIADHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGL   97 (336)
T ss_dssp             CHHHHHTCEEEEEETTEEEEEEEETTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCE
T ss_pred             ccccchheeeecccCceEEEEEEeCCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhh
Confidence            3578999999999999999999999999999998765322100000111123488888888885         7777777


Q ss_pred             eeEEecCCCC----------------CCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHH
Q 003185          574 YGHKISSKWL----------------PSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVA  637 (840)
Q Consensus       574 ~g~~~~~~~~----------------p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa  637 (840)
                      ++++......                ...+...-......||||||+++|+|.+.+.+      ..+++..++.|+.||+
T Consensus        98 ~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~------~~~~~~~~~~i~~qi~  171 (336)
T 2vuw_A           98 NSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT------KLSSLATAKSILHQLT  171 (336)
T ss_dssp             EEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT------TCCCHHHHHHHHHHHH
T ss_pred             cceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh------cCCCHHHHHHHHHHHH
Confidence            6664321100                00000000013357999999999976666532      4689999999999999


Q ss_pred             HHHHHHH-hCCeecccCCCCcEEEeccccc-------------CCCCCeEEEeecCCcccccccccccccccCCCCCCCc
Q 003185          638 AALVELH-SKHIMHRDIKSENILIDLERKK-------------ADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDV  703 (840)
Q Consensus       638 ~AL~yLH-s~gIVHRDLKPeNILLd~~~~~-------------~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~  703 (840)
                      .||.||| ++||+||||||+||||+.++..             ......+||+|||+|+.....               .
T Consensus       172 ~aL~~lH~~~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~---------------~  236 (336)
T 2vuw_A          172 ASLAVAEASLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG---------------I  236 (336)
T ss_dssp             HHHHHHHHHHCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT---------------E
T ss_pred             HHHHHHHHhCCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC---------------c
Confidence            9999999 9999999999999999977310             001137999999999876431               2


Q ss_pred             ccCCCcccchhhhhcccCCCCCCchhhHHHHHHH-HHHHHhCCCCCCCCCH-HHHHHHHHcC-CCCCcchHHhhhccCcc
Q 003185          704 CVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCL-LLELLTLQVPYMGLSE-LEIHDLIQMG-KRPRLTDELEALGSCHE  780 (840)
Q Consensus       704 ~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLGvI-L~ELLTG~~PF~~~~~-~el~~~I~~~-~~p~l~~~l~~~~~~~~  780 (840)
                      .+||+.|||||++.+    .. +.++||||||++ .+++++|..||.+... ..+...+... .....            
T Consensus       237 ~~gt~~y~aPE~~~g----~~-~~~~Diwsl~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~------------  299 (336)
T 2vuw_A          237 VVFCDVSMDEDLFTG----DG-DYQFDIYRLMKKENNNRWGEYHPYSNVLWLHYLTDKMLKQMTFKTK------------  299 (336)
T ss_dssp             EECCCCTTCSGGGCC----CS-SHHHHHHHHHHHHHTTCTTSCCTHHHHHHHHHHHHHHHHTCCCSSC------------
T ss_pred             EEEeecccChhhhcC----CC-ccceehhhhhCCCCcccccccCCCcchhhhhHHHHhhhhhhccCcc------------
Confidence            369999999999985    23 889999998777 7888899999843211 1122222211 11000            


Q ss_pred             ccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHHHHH-HHHH
Q 003185          781 HEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAGDLY-EMFV  829 (840)
Q Consensus       781 ~~~~~~~~~~~~~~~~~~~s~~L~dLI~rCL~~DP~eRPSa~ELL-ehLe  829 (840)
                                .........++.+.+||.+||+.|     |++|++ +|..
T Consensus       300 ----------~~~~~~~~~s~~~~dli~~~L~~d-----sa~e~l~~Hp~  334 (336)
T 2vuw_A          300 ----------CNTPAMKQIKRKIQEFHRTMLNFS-----SATDLLCQHSL  334 (336)
T ss_dssp             ----------CCSHHHHHHHHHHHHHHHHGGGSS-----SHHHHHHHCGG
T ss_pred             ----------cchhhhhhcCHHHHHHHHHHhccC-----CHHHHHhcCCC
Confidence                      012233456789999999999977     999999 8743


No 247
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00  E-value=5e-36  Score=321.09  Aligned_cols=235  Identities=14%  Similarity=0.078  Sum_probs=179.3

Q ss_pred             CCceeeeeecccCceEEEEEEEC--CeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeEEecCCC
Q 003185          505 PSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW  582 (840)
Q Consensus       505 ~~y~i~~~LG~G~fG~Vy~a~~~--~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~l~g~~~~~~~  582 (840)
                      ++|++.+.||+|+||.||+|.+.  +..||+|++..... ......+    .+.+|+.++.+++||||+++++++...+.
T Consensus        31 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~-~~~~~~~----~~~~e~~~l~~l~hp~iv~~~~~~~~~~~  105 (286)
T 3uqc_A           31 GRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGV-LPDDVLQ----ETLSRTLRLSRIDKPGVARVLDVVHTRAG  105 (286)
T ss_dssp             TTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCC-SCHHHHH----HHHHHHHHHHTCCCTTBCCEEEEEEETTE
T ss_pred             CcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccc-cCHHHHH----HHHHHHHHHhcCCCCCcceeeEEEEECCc
Confidence            77999999999999999999984  78999998643321 1222233    44899999999999999999999986653


Q ss_pred             CCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCCCcEEEec
Q 003185          583 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL  662 (840)
Q Consensus       583 ~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKPeNILLd~  662 (840)
                                    .||||||++|++|.+++..       ......+..|+.||+.||.|||++||+||||||+||||+.
T Consensus       106 --------------~~lv~e~~~g~~L~~~l~~-------~~~~~~~~~i~~ql~~aL~~lH~~givH~Dikp~NIll~~  164 (286)
T 3uqc_A          106 --------------GLVVAEWIRGGSLQEVADT-------SPSPVGAIRAMQSLAAAADAAHRAGVALSIDHPSRVRVSI  164 (286)
T ss_dssp             --------------EEEEEECCCEEEHHHHHTT-------CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEET
T ss_pred             --------------EEEEEEecCCCCHHHHHhc-------CCChHHHHHHHHHHHHHHHHHHHCCCccCCCCcccEEEcC
Confidence                          5999999999999999853       2456678999999999999999999999999999999997


Q ss_pred             ccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHHHHHHHHH
Q 003185          663 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL  742 (840)
Q Consensus       663 ~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLGvIL~ELL  742 (840)
                      +       +.+||+++|                              |++|           ++.++|||||||+||||+
T Consensus       165 ~-------g~~kl~~~~------------------------------~~~~-----------~~~~~Di~slG~il~ell  196 (286)
T 3uqc_A          165 D-------GDVVLAYPA------------------------------TMPD-----------ANPQDDIRGIGASLYALL  196 (286)
T ss_dssp             T-------SCEEECSCC------------------------------CCTT-----------CCHHHHHHHHHHHHHHHH
T ss_pred             C-------CCEEEEecc------------------------------ccCC-----------CCchhHHHHHHHHHHHHH
Confidence            7       458887443                              2222           478999999999999999


Q ss_pred             hCCCCCCCCCHHHHHHHHHcCCCCCcchHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHH
Q 003185          743 TLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAG  822 (840)
Q Consensus       743 TG~~PF~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L~dLI~rCL~~DP~eRPSa~  822 (840)
                      ||+.||.+.+..+...............                     ........++.+.+||.+||+.||.+| |+.
T Consensus       197 tg~~Pf~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~l~~li~~~l~~dP~~R-s~~  254 (286)
T 3uqc_A          197 VNRWPLPEAGVRSGLAPAERDTAGQPIE---------------------PADIDRDIPFQISAVAARSVQGDGGIR-SAS  254 (286)
T ss_dssp             HSEECSCCCSBCCCSEECCBCTTSCBCC---------------------HHHHCTTSCHHHHHHHHHHHCTTSSCC-CHH
T ss_pred             HCCCCCCcCCcchhhHHHHHHhccCCCC---------------------hhhcccCCCHHHHHHHHHHcccCCccC-CHH
Confidence            9999998764322110000000000000                     001112346689999999999999999 999


Q ss_pred             HHHHHHHhhcCCC
Q 003185          823 DLYEMFVARTSSS  835 (840)
Q Consensus       823 ELLehLe~l~~~~  835 (840)
                      ++++.|+.+....
T Consensus       255 el~~~L~~~~~~~  267 (286)
T 3uqc_A          255 TLLNLMQQATAVA  267 (286)
T ss_dssp             HHHHHHHHHHC--
T ss_pred             HHHHHHHHHhccC
Confidence            9999999877543


No 248
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00  E-value=4e-36  Score=356.90  Aligned_cols=285  Identities=19%  Similarity=0.191  Sum_probs=195.9

Q ss_pred             CCCCCCceeeeeecccCceEEEEEEE--CCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeEEe
Q 003185          501 PGSFPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKI  578 (840)
Q Consensus       501 p~~~~~y~i~~~LG~G~fG~Vy~a~~--~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~l~g~~~  578 (840)
                      ...+++|++.+.||+|+||.||+|.+  .+..||+|++...   ......+    .+.+|+.++++++||||+++++++.
T Consensus        10 g~~~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~---~~~~~~~----~~~~Ei~iL~~L~HpnIV~l~~v~~   82 (676)
T 3qa8_A           10 TQTCGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQE---LSPKNRE----RWCLEIQIMKKLNHPNVVSAREVPD   82 (676)
T ss_dssp             -------CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSC---CCHHHHH----HHHHHHHHHHHCCBTTBCCEEECCT
T ss_pred             CCCCCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEeccc---CCHHHHH----HHHHHHHHHHhCCCCCCCceeeeec
Confidence            35678999999999999999999987  5788999985422   2233333    3489999999999999999999876


Q ss_pred             cCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCCCcE
Q 003185          579 SSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENI  658 (840)
Q Consensus       579 ~~~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKPeNI  658 (840)
                      .....        ......+|||||++||+|.+++...  .....+++..++.|+.||+.||.|||++||+||||||+||
T Consensus        83 ~~~~~--------~~~~~~~LVmEy~~ggsL~~~L~~~--~~~~~lse~~i~~I~~QLl~aL~yLHs~gIVHrDLKP~NI  152 (676)
T 3qa8_A           83 GLQKL--------APNDLPLLAMEYCEGGDLRKYLNQF--ENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENI  152 (676)
T ss_dssp             TTCCC--------CTTSSCCCEEECCSSCBHHHHHHSS--SCTTCCCSSHHHHHHHHHHHHHHHHHHTTBCCCCCCSTTE
T ss_pred             ccccc--------cCCCeEEEEEEeCCCCCHHHHHHhc--ccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHe
Confidence            42211        0122459999999999999999752  2223588999999999999999999999999999999999


Q ss_pred             EEecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHHHHH
Q 003185          659 LIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLL  738 (840)
Q Consensus       659 LLd~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLGvIL  738 (840)
                      |++.++.    ...+||+|||++........           .....||+.|+|||++.+    ..++.++|||||||++
T Consensus       153 Ll~~~g~----~~~vKL~DFG~a~~~~~~~~-----------~~~~~gt~~Y~APE~l~~----~~~s~ksDIwSLGviL  213 (676)
T 3qa8_A          153 VLQPGPQ----RLIHKIIDLGYAKELDQGEL-----------CTEFVGTLQYLAPELLEQ----KKYTVTVDYWSFGTLA  213 (676)
T ss_dssp             EEECCSS----SCEEEECSCCCCCBTTSCCC-----------CCCCCSCCTTCSSCSSCC----SCCSTTHHHHHHHHHH
T ss_pred             EeecCCC----ceeEEEcccccccccccccc-----------cccccCCcccCChHHhcc----CCCCchhHHHHHHHHH
Confidence            9987632    35699999999986643221           123469999999999875    6789999999999999


Q ss_pred             HHHHhCCCCCCCCCHHHHHHHHHcCCCCCcchHHhhhccCcc-ccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCC
Q 003185          739 LELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHE-HEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTE  817 (840)
Q Consensus       739 ~ELLTG~~PF~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~s~~L~dLI~rCL~~DP~e  817 (840)
                      |+|++|..||.+.........   .................. ..+...  ...........++.+.+||.+||..||.+
T Consensus       214 yeLltG~~Pf~~~~~~~~~~~---~i~~~~~~~~~~~~~l~g~~~~~~~--lp~p~~l~~~ls~~L~dLI~~mL~~DP~k  288 (676)
T 3qa8_A          214 FECITGFRPFLPNWQPVQWHG---KVREKSNEHIVVYDDLTGAVKFSSV--LPTPNHLSGILAGKLERWLQCMLMWHQRQ  288 (676)
T ss_dssp             HHHHSSCSSCCSSCHHHHSST---TCC------CCSCCCCSSSCCCCSS--SCCSCCCCGGGHHHHHHHHHHHSCSSCC-
T ss_pred             HHHHHCCCCCCcccchhhhhh---hhhcccchhhhhhhhhccccccccc--cCCchhhchhhhHHHHHHHHHHccCCHhh
Confidence            999999999976543221100   000000000000000000 000000  00011223446789999999999999999


Q ss_pred             CCCHHHHHH
Q 003185          818 RPTAGDLYE  826 (840)
Q Consensus       818 RPSa~ELLe  826 (840)
                      |||+.++++
T Consensus       289 RPTa~elL~  297 (676)
T 3qa8_A          289 RGTDPQNPN  297 (676)
T ss_dssp             --CCTTCCC
T ss_pred             CcCHHHHhc
Confidence            999988543


No 249
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00  E-value=3.9e-35  Score=350.44  Aligned_cols=244  Identities=23%  Similarity=0.249  Sum_probs=188.5

Q ss_pred             CCCceeeeeecccCceEEEEEEE---CCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeEEecC
Q 003185          504 FPSLSSCDEAGKSVSSSLFRCKF---GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISS  580 (840)
Q Consensus       504 ~~~y~i~~~LG~G~fG~Vy~a~~---~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~l~g~~~~~  580 (840)
                      .++|++.+.||+|+||.||+|.+   ++..||+|++...   ......    ..+.+|+.+|++++|||||++++++...
T Consensus        79 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~---~~~~~~----~~~~~E~~~l~~l~hp~iv~~~~~~~~~  151 (681)
T 2pzi_A           79 AGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHS---GDAEAQ----AMAMAERQFLAEVVHPSIVQIFNFVEHT  151 (681)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSS---CCHHHH----HHHHHHHGGGGGCCCTTBCCEEEEEEEE
T ss_pred             CCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCcc---CCHHHH----HHHHHHHHHHHhcCCCCcCeEeeeEeec
Confidence            47899999999999999999997   4688999975321   122222    3448999999999999999999999865


Q ss_pred             CCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCCCcEEE
Q 003185          581 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILI  660 (840)
Q Consensus       581 ~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKPeNILL  660 (840)
                      ...         ..+..||||||++|++|.+++.       ..+++..++.|+.||+.||.|||++|||||||||+||||
T Consensus       152 ~~~---------~~~~~~lv~E~~~g~~L~~~~~-------~~l~~~~~~~~~~qi~~aL~~lH~~giiHrDlkp~NIll  215 (681)
T 2pzi_A          152 DRH---------GDPVGYIVMEYVGGQSLKRSKG-------QKLPVAEAIAYLLEILPALSYLHSIGLVYNDLKPENIML  215 (681)
T ss_dssp             CTT---------SCEEEEEEEECCCCEECC-----------CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE
T ss_pred             CCC---------CCceeEEEEEeCCCCcHHHHHh-------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecccChHHeEE
Confidence            431         2233699999999999988764       268999999999999999999999999999999999999


Q ss_pred             ecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHHHHHHH
Q 003185          661 DLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLE  740 (840)
Q Consensus       661 d~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLGvIL~E  740 (840)
                      +.+        .+||+|||+++.....              ....||+.|+|||++.+     .++.++|||||||+||+
T Consensus       216 ~~~--------~~kl~DFG~a~~~~~~--------------~~~~gt~~y~aPE~~~~-----~~~~~sDi~slG~~l~~  268 (681)
T 2pzi_A          216 TEE--------QLKLIDLGAVSRINSF--------------GYLYGTPGFQAPEIVRT-----GPTVATDIYTVGRTLAA  268 (681)
T ss_dssp             CSS--------CEEECCCTTCEETTCC--------------SCCCCCTTTSCTTHHHH-----CSCHHHHHHHHHHHHHH
T ss_pred             eCC--------cEEEEecccchhcccC--------------CccCCCccccCHHHHcC-----CCCCceehhhhHHHHHH
Confidence            764        4999999999765432              23469999999999976     23889999999999999


Q ss_pred             HHhCCCCCCCCCHHHHHHHHHcCCCCCcchHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCC
Q 003185          741 LLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPT  820 (840)
Q Consensus       741 LLTG~~PF~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~L~dLI~rCL~~DP~eRPS  820 (840)
                      |++|..||.+....            .++.                      .......++.+.+||.+||..||.+||+
T Consensus       269 l~~g~~~~~~~~~~------------~~~~----------------------~~~~~~~~~~l~~li~~~l~~dP~~R~~  314 (681)
T 2pzi_A          269 LTLDLPTRNGRYVD------------GLPE----------------------DDPVLKTYDSYGRLLRRAIDPDPRQRFT  314 (681)
T ss_dssp             HHSCCCEETTEECS------------SCCT----------------------TCHHHHHCHHHHHHHHHHTCSSGGGSCS
T ss_pred             HHhCCCCCcccccc------------cccc----------------------cccccccCHHHHHHHhhhccCChhhCCC
Confidence            99999988642100            0000                      0011123457899999999999999995


Q ss_pred             -HHHHHHHHHhh
Q 003185          821 -AGDLYEMFVAR  831 (840)
Q Consensus       821 -a~ELLehLe~l  831 (840)
                       ++++.+.|..+
T Consensus       315 ~~~~l~~~l~~~  326 (681)
T 2pzi_A          315 TAEEMSAQLTGV  326 (681)
T ss_dssp             SHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHH
Confidence             55555555543


No 250
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00  E-value=1.2e-35  Score=334.33  Aligned_cols=266  Identities=14%  Similarity=0.127  Sum_probs=184.8

Q ss_pred             CCCCceeeeeecccCceEEEEEEEC--CeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCC-CCccee------
Q 003185          503 SFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRH-SCIVEM------  573 (840)
Q Consensus       503 ~~~~y~i~~~LG~G~fG~Vy~a~~~--~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~H-pNIV~l------  573 (840)
                      ....|.+.+.||+|+||.||+|.+.  +..||||+...... ......    +.+.+|+.+++.++| +|+..+      
T Consensus        76 ~~~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~-~~~~~~----~~~~~E~~~~~~l~~~~~~~~~~~~~~~  150 (413)
T 3dzo_A           76 RPRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTER-PPSNAI----KQMKEEVLRLRLLRGIKNQKQAKVHLRF  150 (413)
T ss_dssp             CCEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC-----CC----HHHHHHHHGGGGSTTCCSHHHHHHHTCB
T ss_pred             CceeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCC-ccHHHH----HHHHHHHHHHHhhccCCCHHHHHHhccc
Confidence            3456889999999999999999984  88999998753321 111222    334899999999987 332211      


Q ss_pred             ---eeEEecCCCCC---CCCCCCccccceEEEEEeccCCCCHHHHHHHHh--ccCCCCCCHHHHHHHHHHHHHHHHHHHh
Q 003185          574 ---YGHKISSKWLP---SADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLS--ETGEKHVSVKLALFIAQDVAAALVELHS  645 (840)
Q Consensus       574 ---~g~~~~~~~~p---~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~--~~~~~~ls~~~~~~Ia~QIa~AL~yLHs  645 (840)
                         +..........   .............+++|+++. ++|.+++....  ......+++..++.|+.||+.||+|||+
T Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~  229 (413)
T 3dzo_A          151 IFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQ-SNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHH  229 (413)
T ss_dssp             CCCCEEEECCC---------------CCSEEEEEECCS-EEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccchhhcccCCCCccccccCCCccccccceEEEeehhc-CCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence               11111111000   000000111334688888875 79999996432  1223457888999999999999999999


Q ss_pred             CCeecccCCCCcEEEecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhccc-----
Q 003185          646 KHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMH-----  720 (840)
Q Consensus       646 ~gIVHRDLKPeNILLd~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~-----  720 (840)
                      +|||||||||+||||+.+       +.+||+|||+++......             ....| +.|+|||++.+..     
T Consensus       230 ~~iiHrDiKp~NILl~~~-------~~~kL~DFG~a~~~~~~~-------------~~~~g-~~y~aPE~~~~~~~~~~~  288 (413)
T 3dzo_A          230 YGLVHTYLRPVDIVLDQR-------GGVFLTGFEHLVRDGASA-------------VSPIG-RGFAPPETTAERMLPFGQ  288 (413)
T ss_dssp             TTEECSCCCGGGEEECTT-------CCEEECCGGGCEETTEEE-------------CCCCC-TTTCCHHHHHHHTSTTGG
T ss_pred             CCcccCCcccceEEEecC-------CeEEEEeccceeecCCcc-------------ccCCC-CceeCchhhhcccccccc
Confidence            999999999999999987       459999999998654421             22357 9999999995321     


Q ss_pred             -CCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCcchHHhhhccCccccccccCCCCCCchhhhhh
Q 003185          721 -KPNLYGLEVDIWSYGCLLLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELET  799 (840)
Q Consensus       721 -~~~~~s~kSDVWSLGvIL~ELLTG~~PF~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  799 (840)
                       ....++.++|||||||+||||++|+.||...+.......+...                       .         ...
T Consensus       289 ~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~~~-----------------------~---------~~~  336 (413)
T 3dzo_A          289 HHPTLMTFAFDTWTLGLAIYWIWCADLPNTDDAALGGSEWIFRS-----------------------C---------KNI  336 (413)
T ss_dssp             GCCEEECHHHHHHHHHHHHHHHHHSSCCCCTTGGGSCSGGGGSS-----------------------C---------CCC
T ss_pred             ccCcCCCchhhHHHHHHHHHHHHHCCCCCCCcchhhhHHHHHhh-----------------------c---------ccC
Confidence             2355788999999999999999999999766432211111100                       0         012


Q ss_pred             HHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 003185          800 LSFLVDVFRRCTEENPTERPTAGDLYEM  827 (840)
Q Consensus       800 s~~L~dLI~rCL~~DP~eRPSa~ELLeh  827 (840)
                      ++.+.+||.+||..||.+||++.++++|
T Consensus       337 ~~~~~~li~~~l~~dP~~Rpt~~~~l~~  364 (413)
T 3dzo_A          337 PQPVRALLEGFLRYPKEDRLLPLQAMET  364 (413)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred             CHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence            4579999999999999999998888765


No 251
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.95  E-value=2.9e-29  Score=294.35  Aligned_cols=193  Identities=15%  Similarity=0.113  Sum_probs=129.9

Q ss_pred             eeeecccCceEEEEEE--ECCeeEEEEEEecccCC--CChHHHHHhHHhHHHHHHHHHhC-CCCCcceeeeEEecCCCCC
Q 003185          510 CDEAGKSVSSSLFRCK--FGSADAAAKVRTLKVCG--SSADEIRNFEYSCLGEVRMLGAL-RHSCIVEMYGHKISSKWLP  584 (840)
Q Consensus       510 ~~~LG~G~fG~Vy~a~--~~~~~vAVKI~~lk~~~--~~~~~~~~f~~~~~rEi~iL~~L-~HpNIV~l~g~~~~~~~~p  584 (840)
                      ...++.|++|.+..++  +-+..+++|++......  ......+.-.+.|.+|+.+|+++ .|+||+++++++.++..  
T Consensus       239 ~~~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~--  316 (569)
T 4azs_A          239 QNQPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQS--  316 (569)
T ss_dssp             ECC-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSE--
T ss_pred             hhccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCE--
Confidence            3456677777776654  36788999998654322  22233333345679999999999 59999999999987764  


Q ss_pred             CCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCCCcEEEeccc
Q 003185          585 SADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLER  664 (840)
Q Consensus       585 ~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKPeNILLd~~~  664 (840)
                                  .||||||++|++|.++|..     ...++..   .|+.||+.||+|||++|||||||||+||||+.+ 
T Consensus       317 ------------~yLVMEyv~G~~L~d~i~~-----~~~l~~~---~I~~QIl~AL~ylH~~GIIHRDIKPeNILL~~d-  375 (569)
T 4azs_A          317 ------------GWLVMEKLPGRLLSDMLAA-----GEEIDRE---KILGSLLRSLAALEKQGFWHDDVRPWNVMVDAR-  375 (569)
T ss_dssp             ------------EEEEEECCCSEEHHHHHHT-----TCCCCHH---HHHHHHHHHHHHHHHTTCEESCCCGGGEEECTT-
T ss_pred             ------------EEEEEecCCCCcHHHHHHh-----CCCCCHH---HHHHHHHHHHHHHHHCCceeccCchHhEEECCC-
Confidence                        5999999999999999975     3456654   588999999999999999999999999999877 


Q ss_pred             ccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHHHHHHHHHhC
Q 003185          665 KKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLTL  744 (840)
Q Consensus       665 ~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLGvIL~ELLTG  744 (840)
                            +.+||+|||+|+.......          .....+||+.|||||++.+     .+..++|+||+|+++++|.++
T Consensus       376 ------g~vKL~DFGlAr~~~~~~~----------~~~t~vGTp~YmAPE~l~g-----~~~~~~d~~s~g~~~~~l~~~  434 (569)
T 4azs_A          376 ------QHARLIDFGSIVTTPQDCS----------WPTNLVQSFFVFVNELFAE-----NKSWNGFWRSAPVHPFNLPQP  434 (569)
T ss_dssp             ------SCEEECCCTTEESCC---C----------CSHHHHHHHHHHHHHHC----------------------CCCCTT
T ss_pred             ------CCEEEeecccCeeCCCCCc----------cccCceechhhccHHHhCC-----CCCCcccccccccchhhhccc
Confidence                  4599999999986644221          1244679999999999975     356789999999998887665


Q ss_pred             CC
Q 003185          745 QV  746 (840)
Q Consensus       745 ~~  746 (840)
                      ..
T Consensus       435 ~~  436 (569)
T 4azs_A          435 WS  436 (569)
T ss_dssp             HH
T ss_pred             cc
Confidence            43


No 252
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.92  E-value=2.7e-26  Score=267.59  Aligned_cols=201  Identities=19%  Similarity=0.176  Sum_probs=146.8

Q ss_pred             eeeeeecccCceEEEEEEECCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeEEecCCCCCCCC
Q 003185          508 SSCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWLPSAD  587 (840)
Q Consensus       508 ~i~~~LG~G~fG~Vy~a~~~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~l~g~~~~~~~~p~~~  587 (840)
                      ...+.||+|+||.||+|.+.+..+++|....+.............+++.+|+.+|++++||||+++..++......    
T Consensus       339 ~~~~~LG~G~fg~Vy~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~----  414 (540)
T 3en9_A          339 IPEHLIGKGAEADIKRDSYLDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNK----  414 (540)
T ss_dssp             ---------CCEEEEEEECSSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTT----
T ss_pred             CCCCEEeeCCCEEEEEEEECCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCcc----
Confidence            4467899999999999998999999998765433322222333345679999999999999999555544444332    


Q ss_pred             CCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCCCcEEEecccccC
Q 003185          588 GNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLERKKA  667 (840)
Q Consensus       588 g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKPeNILLd~~~~~~  667 (840)
                                ||||||++|++|.+++..             +..++.||+.||.|||++||+||||||+|||++.     
T Consensus       415 ----------~lVmE~~~ggsL~~~l~~-------------~~~i~~qi~~aL~~LH~~gIiHrDiKp~NILl~~-----  466 (540)
T 3en9_A          415 ----------RIMMSYINGKLAKDVIED-------------NLDIAYKIGEIVGKLHKNDVIHNDLTTSNFIFDK-----  466 (540)
T ss_dssp             ----------EEEEECCCSEEHHHHSTT-------------CTHHHHHHHHHHHHHHHTTEECTTCCTTSEEESS-----
T ss_pred             ----------EEEEECCCCCCHHHHHHH-------------HHHHHHHHHHHHHHHHHCcCccCCCCHHHEEECC-----
Confidence                      999999999999999852             5689999999999999999999999999999985     


Q ss_pred             CCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHHHHHHHHHhCCCC
Q 003185          668 DGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLTLQVP  747 (840)
Q Consensus       668 ~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLGvIL~ELLTG~~P  747 (840)
                          .+||+|||+++............   ........||+.|||||++....  ..|+..+|+|+..+-..+.+.++.+
T Consensus       467 ----~~kL~DFGla~~~~~~~~~~~~~---~~~~~~~~GT~~y~APEv~~~~~--~~Y~~~~d~ws~vl~~l~~v~~r~r  537 (540)
T 3en9_A          467 ----DLYIIDFGLGKISNLDEDKAVDL---IVFKKAVLSTHHEKFDEIWERFL--EGYKSVYDRWEIILELMKDVERRAR  537 (540)
T ss_dssp             ----SEEECCCTTCEECCCHHHHHHHH---HHHHHHHHHHCGGGHHHHHHHHH--HHHHHHCTTHHHHHHHHHHHHTCSC
T ss_pred             ----eEEEEECccCEECCCccccccch---hhhhhhhcCCCCcCCHHHHHHHH--HHHHHHHhHHHHHHHHHHHHHhccc
Confidence                39999999998775432110000   00012357999999999997522  2467788999999999998888877


Q ss_pred             CC
Q 003185          748 YM  749 (840)
Q Consensus       748 F~  749 (840)
                      |.
T Consensus       538 Y~  539 (540)
T 3en9_A          538 YV  539 (540)
T ss_dssp             CC
T ss_pred             cC
Confidence            74


No 253
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.84  E-value=4.8e-21  Score=205.27  Aligned_cols=151  Identities=16%  Similarity=0.140  Sum_probs=113.2

Q ss_pred             ceeeeeecccCceEEEEEEE-CCeeEEEEEEecccCCCChH----------HHHHhHHhHHHHHHHHHhCCCCCcceeee
Q 003185          507 LSSCDEAGKSVSSSLFRCKF-GSADAAAKVRTLKVCGSSAD----------EIRNFEYSCLGEVRMLGALRHSCIVEMYG  575 (840)
Q Consensus       507 y~i~~~LG~G~fG~Vy~a~~-~~~~vAVKI~~lk~~~~~~~----------~~~~f~~~~~rEi~iL~~L~HpNIV~l~g  575 (840)
                      |.+.+.||+|+||.||+|.+ .+..+|+|+...........          ........+.+|+.+|++++  | +++++
T Consensus        92 ~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~--~-~~v~~  168 (282)
T 1zar_A           92 DAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ--G-LAVPK  168 (282)
T ss_dssp             SEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT--T-SSSCC
T ss_pred             EEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc--C-CCcCe
Confidence            56669999999999999998 57899999975432111100          00012234589999999998  5 66666


Q ss_pred             EEecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCC
Q 003185          576 HKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKS  655 (840)
Q Consensus       576 ~~~~~~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKP  655 (840)
                      ++...               ..|+||||++|++|.+ +..           .....++.||+.||.|||++||+||||||
T Consensus       169 ~~~~~---------------~~~lvmE~~~g~~L~~-l~~-----------~~~~~i~~qi~~~l~~lH~~giiHrDlkp  221 (282)
T 1zar_A          169 VYAWE---------------GNAVLMELIDAKELYR-VRV-----------ENPDEVLDMILEEVAKFYHRGIVHGDLSQ  221 (282)
T ss_dssp             EEEEE---------------TTEEEEECCCCEEGGG-CCC-----------SCHHHHHHHHHHHHHHHHHTTEECSCCST
T ss_pred             EEecc---------------ceEEEEEecCCCcHHH-cch-----------hhHHHHHHHHHHHHHHHHHCCCEeCCCCH
Confidence            55432               1399999999999987 421           23457999999999999999999999999


Q ss_pred             CcEEEecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccCCCcccchhhhhc
Q 003185          656 ENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRA  718 (840)
Q Consensus       656 eNILLd~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~  718 (840)
                      +|||++ +       +.+||+|||+|+.                       +..|+|||++..
T Consensus       222 ~NILl~-~-------~~vkl~DFG~a~~-----------------------~~~~~a~e~l~r  253 (282)
T 1zar_A          222 YNVLVS-E-------EGIWIIDFPQSVE-----------------------VGEEGWREILER  253 (282)
T ss_dssp             TSEEEE-T-------TEEEECCCTTCEE-----------------------TTSTTHHHHHHH
T ss_pred             HHEEEE-C-------CcEEEEECCCCeE-----------------------CCCCCHHHHHHH
Confidence            999999 6       4699999999852                       346789999864


No 254
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.78  E-value=5.9e-19  Score=186.15  Aligned_cols=143  Identities=15%  Similarity=0.131  Sum_probs=105.2

Q ss_pred             ceeeeeecccCceEEEEEEE--CCee--EEEEEEecccCCCChH----------------HHHHhHHhHHHHHHHHHhCC
Q 003185          507 LSSCDEAGKSVSSSLFRCKF--GSAD--AAAKVRTLKVCGSSAD----------------EIRNFEYSCLGEVRMLGALR  566 (840)
Q Consensus       507 y~i~~~LG~G~fG~Vy~a~~--~~~~--vAVKI~~lk~~~~~~~----------------~~~~f~~~~~rEi~iL~~L~  566 (840)
                      |.+.+.||+|+||.||+|.+  .+..  +|+|++..........                ........+.+|+.+|.+|.
T Consensus        49 ~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~  128 (258)
T 1zth_A           49 TAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAK  128 (258)
T ss_dssp             EEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHH
T ss_pred             hhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHH
Confidence            67899999999999999998  7888  9999965432111100                00111235689999999999


Q ss_pred             CCCc--ceeeeEEecCCCCCCCCCCCccccceEEEEEeccCC-C----CHHHHHHHHhccCCCCCCHHHHHHHHHHHHHH
Q 003185          567 HSCI--VEMYGHKISSKWLPSADGNPEHHLLQSAIFMEYVKG-G----SVKNYIEKLSETGEKHVSVKLALFIAQDVAAA  639 (840)
Q Consensus       567 HpNI--V~l~g~~~~~~~~p~~~g~~~~~~~~~~LVmEy~~g-G----SL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~A  639 (840)
                      |++|  +.+++.  .                ..+|||||+.+ |    +|.+++..        .++..+..++.||+.|
T Consensus       129 ~~~i~~p~~~~~--~----------------~~~lVmE~~g~~g~~~~~L~~~~~~--------~~~~~~~~i~~qi~~~  182 (258)
T 1zth_A          129 EAGVSVPQPYTY--M----------------KNVLLMEFIGEDELPAPTLVELGRE--------LKELDVEGIFNDVVEN  182 (258)
T ss_dssp             HTTCCCCCEEEE--E----------------TTEEEEECCEETTEECCBHHHHGGG--------GGGSCHHHHHHHHHHH
T ss_pred             hCCCCCCeEEEc--C----------------CCEEEEEecCCCCCccccHHHHhhc--------cChHHHHHHHHHHHHH
Confidence            8864  344432  1                12899999942 3    67765432        2345678999999999


Q ss_pred             HHHHH-hCCeecccCCCCcEEEecccccCCCCCeEEEeecCCcccc
Q 003185          640 LVELH-SKHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPL  684 (840)
Q Consensus       640 L~yLH-s~gIVHRDLKPeNILLd~~~~~~~~~~~vKL~DFGlA~~~  684 (840)
                      |.||| +.||+||||||+|||++.         .++|+|||+|...
T Consensus       183 l~~lH~~~givHrDlkp~NILl~~---------~~~liDFG~a~~~  219 (258)
T 1zth_A          183 VKRLYQEAELVHADLSEYNIMYID---------KVYFIDMGQAVTL  219 (258)
T ss_dssp             HHHHHHTSCEECSSCSTTSEEESS---------SEEECCCTTCEET
T ss_pred             HHHHHHHCCEEeCCCCHHHEEEcC---------cEEEEECcccccC
Confidence            99999 999999999999999975         3999999999654


No 255
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.64  E-value=4.1e-16  Score=174.43  Aligned_cols=149  Identities=17%  Similarity=0.186  Sum_probs=102.0

Q ss_pred             ceeeeeecccCceEEEEEEE-CCeeEEEEEEecccCCCCh--------------HHHHHhHHhHHHHHHHHHhCCCCCcc
Q 003185          507 LSSCDEAGKSVSSSLFRCKF-GSADAAAKVRTLKVCGSSA--------------DEIRNFEYSCLGEVRMLGALRHSCIV  571 (840)
Q Consensus       507 y~i~~~LG~G~fG~Vy~a~~-~~~~vAVKI~~lk~~~~~~--------------~~~~~f~~~~~rEi~iL~~L~HpNIV  571 (840)
                      |++...||.|+||.||+|.. .+..+|||+.+........              ......+....+|...|.+|.+.++.
T Consensus        97 Y~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv~  176 (397)
T 4gyi_A           97 YSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGFP  176 (397)
T ss_dssp             SEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTCS
T ss_pred             EEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence            89999999999999999986 6789999997653221110              00011111224566666666544332


Q ss_pred             --eeeeEEecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCee
Q 003185          572 --EMYGHKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIM  649 (840)
Q Consensus       572 --~l~g~~~~~~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~gIV  649 (840)
                        ..+++.                  ..+|||||++|++|.++..           ......++.||+.+|.|||++|||
T Consensus       177 vp~p~~~~------------------~~~LVME~i~G~~L~~l~~-----------~~~~~~l~~qll~~l~~lH~~gIV  227 (397)
T 4gyi_A          177 VPEPIAQS------------------RHTIVMSLVDALPMRQVSS-----------VPDPASLYADLIALILRLAKHGLI  227 (397)
T ss_dssp             CCCEEEEE------------------TTEEEEECCSCEEGGGCCC-----------CSCHHHHHHHHHHHHHHHHHTTEE
T ss_pred             CCeeeecc------------------CceEEEEecCCccHhhhcc-----------cHHHHHHHHHHHHHHHHHHHCCCc
Confidence              222211                  1279999999988754321           123467889999999999999999


Q ss_pred             cccCCCCcEEEecccccCCCCC---eEEEeecCCcccc
Q 003185          650 HRDIKSENILIDLERKKADGKP---VVKLCDFDRAVPL  684 (840)
Q Consensus       650 HRDLKPeNILLd~~~~~~~~~~---~vKL~DFGlA~~~  684 (840)
                      ||||||.||||+.+++..+...   .+.|+||+-+...
T Consensus       228 HrDLKp~NILl~~dgd~~d~~~~~~~~~iID~~Q~V~~  265 (397)
T 4gyi_A          228 HGDFNEFNILIREEKDAEDPSSITLTPIIIXFPQMVSM  265 (397)
T ss_dssp             CSCCSTTSEEEEEEECSSCTTSEEEEEEECCCTTCEET
T ss_pred             CCCCCHHHEEEeCCCCcccccccccceEEEEeCCcccC
Confidence            9999999999998864332222   4899999988654


No 256
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.21  E-value=3.7e-11  Score=125.30  Aligned_cols=140  Identities=15%  Similarity=0.130  Sum_probs=107.8

Q ss_pred             CCCceeeeeecccCceEEEEEEECCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCC-CCCcceeeeEEecCCC
Q 003185          504 FPSLSSCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALR-HSCIVEMYGHKISSKW  582 (840)
Q Consensus       504 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~-HpNIV~l~g~~~~~~~  582 (840)
                      ++.|.+...++.|+++.||++...+..+++|+........    .    ..+.+|+.+|+.|. +.++.++++++.... 
T Consensus        13 l~~~~~~~~~~g~s~~~v~~~~~~~~~~vlK~~~~~~~~~----~----~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~-   83 (263)
T 3tm0_A           13 IEKYRCVKDTEGMSPAKVYKLVGENENLYLKMTDSRYKGT----T----YDVEREKDMMLWLEGKLPVPKVLHFERHDG-   83 (263)
T ss_dssp             HTTSEEEECCSCCSSSEEEEEECSSCEEEEEEECGGGTTS----T----TCHHHHHHHHHHHTTTSCCCCEEEEEEETT-
T ss_pred             hccceeEeeccCCCCCeEEEEECCCCcEEEEeCCcccCCC----H----HHHHHHHHHHHHHhcCCCCCeEEEEEecCC-
Confidence            4678999999999999999999888899999865321111    1    12488999999995 677889998876543 


Q ss_pred             CCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHh-----------------
Q 003185          583 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHS-----------------  645 (840)
Q Consensus       583 ~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs-----------------  645 (840)
                                   ..|+||||++|.+|.+.+.          +......++.+++.+|..||+                 
T Consensus        84 -------------~~~lv~e~i~G~~l~~~~~----------~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~  140 (263)
T 3tm0_A           84 -------------WSNLLMSEADGVLCSEEYE----------DEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLA  140 (263)
T ss_dssp             -------------EEEEEEECCSSEEHHHHCC----------TTTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHH
T ss_pred             -------------ceEEEEEecCCeehhhccC----------CcccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHH
Confidence                         3599999999999876531          112234788999999999998                 


Q ss_pred             ------------------------------------------CCeecccCCCCcEEEecccccCCCCCeEEEeecCCcc
Q 003185          646 ------------------------------------------KHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAV  682 (840)
Q Consensus       646 ------------------------------------------~gIVHRDLKPeNILLd~~~~~~~~~~~vKL~DFGlA~  682 (840)
                                                                ..++|+|++|.|||++.+       ..+.|+||+.+.
T Consensus       141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~-------~~~~lIDwe~a~  212 (263)
T 3tm0_A          141 ELDYLLNNDLADVDCENWEEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDG-------KVSGFIDLGRSG  212 (263)
T ss_dssp             HHHHHHHTTCSCCSGGGGSTTCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETT-------EEEEECCCTTCE
T ss_pred             HHHHHHhccccccccccccccccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECC-------cEEEEEEchhcc
Confidence                                                      458999999999999754       346799999764


No 257
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=98.97  E-value=1.2e-09  Score=112.38  Aligned_cols=135  Identities=14%  Similarity=0.111  Sum_probs=93.3

Q ss_pred             CCCCceeeeeecccCceEEEEEEEC-CeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCC--cceeeeEEec
Q 003185          503 SFPSLSSCDEAGKSVSSSLFRCKFG-SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSC--IVEMYGHKIS  579 (840)
Q Consensus       503 ~~~~y~i~~~LG~G~fG~Vy~a~~~-~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpN--IV~l~g~~~~  579 (840)
                      .+..|.+....+.|..+.||++... +..+++|+....       ...    .+.+|+.+++.|.+.+  +.+++++...
T Consensus        18 ~~~~~~~~~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~-------~~~----~~~~E~~~l~~l~~~~~~vP~~~~~~~~   86 (264)
T 1nd4_A           18 RLFGYDWAQQTIGCSDAAVFRLSAQGRPVLFVKTDLSG-------ALN----ELQDEAARLSWLATTGVPCAAVLDVVTE   86 (264)
T ss_dssp             TTTTCEEEECSCTTSSCEEEEEECTTSCCEEEEEECSC-------TTS----CHHHHHHHHHHHHTTTCCBCCEEEEEEC
T ss_pred             hcCCCceEecccCCCCceEEEEecCCCCeEEEEeCCcc-------cch----hhhHHHHHHHHHHhCCCCCCeEEEeccC
Confidence            4556776655556777999999764 567999985421       111    2378999999986544  4568887664


Q ss_pred             CCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCC------------
Q 003185          580 SKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKH------------  647 (840)
Q Consensus       580 ~~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~g------------  647 (840)
                      .+              ..++||||++|.+|.  ..        ...   ...++.+++..|..||+..            
T Consensus        87 ~~--------------~~~~v~e~i~G~~l~--~~--------~~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~  139 (264)
T 1nd4_A           87 AG--------------RDWLLLGEVPGQDLL--SS--------HLA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKH  139 (264)
T ss_dssp             SS--------------CEEEEEECCSSEETT--TS--------CCC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHH
T ss_pred             CC--------------CCEEEEEecCCcccC--cC--------cCC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHH
Confidence            33              249999999998874  11        011   1245666777777777643            


Q ss_pred             ----------------------------------------------eecccCCCCcEEEecccccCCCCCeEEEeecCCc
Q 003185          648 ----------------------------------------------IMHRDIKSENILIDLERKKADGKPVVKLCDFDRA  681 (840)
Q Consensus       648 ----------------------------------------------IVHRDLKPeNILLd~~~~~~~~~~~vKL~DFGlA  681 (840)
                                                                    ++|+|++|.|||++.+       ..+.|+|||.+
T Consensus       140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~-------~~~~liD~~~a  212 (264)
T 1nd4_A          140 RIERARTRMEAGLVDQDDLDEEHQGLAPAELFARLKARMPDGEDLVVTHGDACLPNIMVENG-------RFSGFIDCGRL  212 (264)
T ss_dssp             HHHHHHHHHHTTCCCTTSCCGGGTTCCHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETT-------EEEEECCCTTC
T ss_pred             HHHHHHHHHhcCCccchhhhhhccCccHHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECC-------cEEEEEcchhc
Confidence                                                          9999999999999754       34679999987


Q ss_pred             c
Q 003185          682 V  682 (840)
Q Consensus       682 ~  682 (840)
                      .
T Consensus       213 ~  213 (264)
T 1nd4_A          213 G  213 (264)
T ss_dssp             E
T ss_pred             c
Confidence            4


No 258
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=98.95  E-value=1.5e-09  Score=118.90  Aligned_cols=147  Identities=15%  Similarity=0.171  Sum_probs=106.1

Q ss_pred             eeeeeecccCceEEEEEEECCeeEEEEEEe--cccCCCChHHHHHhHHhHHHHHHHHHhCC--CCCcceeeeEEecCCCC
Q 003185          508 SSCDEAGKSVSSSLFRCKFGSADAAAKVRT--LKVCGSSADEIRNFEYSCLGEVRMLGALR--HSCIVEMYGHKISSKWL  583 (840)
Q Consensus       508 ~i~~~LG~G~fG~Vy~a~~~~~~vAVKI~~--lk~~~~~~~~~~~f~~~~~rEi~iL~~L~--HpNIV~l~g~~~~~~~~  583 (840)
                      ...+.|+.|.++.||++...+..+++|+..  ....   ....    ..+.+|+.+++.|.  +..+++++.++..... 
T Consensus        41 ~~~~~l~~G~sn~~y~v~~~~~~~vlr~~~~p~~~~---~~~~----~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~-  112 (359)
T 3dxp_A           41 LSVEQFKGGQSNPTFKLVTPGQTYVMRAKPGPKSKL---LPSA----HAIEREYRVMDALAGTDVPVAKMYALCEDESV-  112 (359)
T ss_dssp             CEEEECCC-CCSCEEEEECSSCEEEEECCCC-----------------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTT-
T ss_pred             ceEEEcCCcccceEEEEEECCceEEEEeCCCCCCCC---CCcH----HHHHHHHHHHHHhhcCCCCCCcEEEECCCCCc-
Confidence            346789999999999999877888888743  1110   0111    23488999999997  4567888888765432 


Q ss_pred             CCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHh------------------
Q 003185          584 PSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHS------------------  645 (840)
Q Consensus       584 p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs------------------  645 (840)
                                ....|+||||++|..|.+..       ...++......++.+++.+|..||+                  
T Consensus       113 ----------~g~~~~vme~v~G~~l~~~~-------~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~  175 (359)
T 3dxp_A          113 ----------IGRAFYIMEFVSGRVLWDQS-------LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYF  175 (359)
T ss_dssp             ----------TSSCEEEEECCCCBCCCCTT-------CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHH
T ss_pred             ----------cCCeEEEEEecCCeecCCCc-------cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCch
Confidence                      12349999999987764311       1346788888999999999999997                  


Q ss_pred             ----------------------------------------CCeecccCCCCcEEEecccccCCCCCeEEEeecCCcccc
Q 003185          646 ----------------------------------------KHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPL  684 (840)
Q Consensus       646 ----------------------------------------~gIVHRDLKPeNILLd~~~~~~~~~~~vKL~DFGlA~~~  684 (840)
                                                              ..++|+|++|.|||++.++.     ..+.|+||+.+..-
T Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~-----~v~~viDwe~a~~g  249 (359)
T 3dxp_A          176 QRQIERWTKQYKLSETESIPAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEP-----RVLAVLDWELSTLG  249 (359)
T ss_dssp             HHHHHHHHHHHHHHCCSCCHHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSS-----CEEEECCCTTCEEE
T ss_pred             HHHHHHHHHHHHhcCCcCChHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCC-----cEEEEECccccccC
Confidence                                                    36999999999999986631     35799999988643


No 259
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.84  E-value=2.1e-09  Score=115.13  Aligned_cols=196  Identities=18%  Similarity=0.210  Sum_probs=119.5

Q ss_pred             eeecccCceEEEEEEECCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCC-CCC--cceeeeEEecCCCCCCCC
Q 003185          511 DEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALR-HSC--IVEMYGHKISSKWLPSAD  587 (840)
Q Consensus       511 ~~LG~G~fG~Vy~a~~~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~-HpN--IV~l~g~~~~~~~~p~~~  587 (840)
                      +.++.|.+..||++.   ..+++|+...      ....    ..+.+|+.+|+.|. +..  +.+++.......      
T Consensus        26 ~~~~~G~~n~v~~v~---~~~vlR~~~~------~~~~----~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~------   86 (304)
T 3sg8_A           26 EISGEGNDCIAYEIN---RDFIFKFPKH------SRGS----TNLFNEVNILKRIHNKLPLPIPEVVFTGMPSE------   86 (304)
T ss_dssp             CEEEECSSEEEEEST---TSEEEEEESS------HHHH----HHHHHHHHHHHHHTTSSSSCCCCEEEECCCCS------
T ss_pred             EecCCCCcceEEEEC---CEEEEEecCC------cchH----HHHHHHHHHHHHHHhcCCCCCCceEeecCCCC------
Confidence            458999999999874   5688887431      1122    34489999998884 333  344444432221      


Q ss_pred             CCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHh----------------------
Q 003185          588 GNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHS----------------------  645 (840)
Q Consensus       588 g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs----------------------  645 (840)
                           .....|+||++++|.+|......       .++......++.+++..|..||+                      
T Consensus        87 -----~~~~~~~vm~~i~G~~l~~~~~~-------~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~  154 (304)
T 3sg8_A           87 -----TYQMSFAGFTKIKGVPLTPLLLN-------NLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDN  154 (304)
T ss_dssp             -----SCSCSCEEEECCCCEECCHHHHH-------TSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHH
T ss_pred             -----CCCcceEEEcccCCeECCccccc-------cCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHH
Confidence                 11234899999999888654322       36677777788888888888885                      


Q ss_pred             ------------------------------------CCeecccCCCCcEEEecccccCCCCCeEEEeecCCccccccccc
Q 003185          646 ------------------------------------KHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLH  689 (840)
Q Consensus       646 ------------------------------------~gIVHRDLKPeNILLd~~~~~~~~~~~vKL~DFGlA~~~~~~~~  689 (840)
                                                          ..++|+|++|.|||++.+.     ...+.|+||+.+..-.....
T Consensus       155 ~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~-----~~~~~~iD~~~~~~~~~~~D  229 (304)
T 3sg8_A          155 KKIKKLLSRELKGPQMKKVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEK-----NTICGIIDFGDAAISDPDND  229 (304)
T ss_dssp             HHHHHHHTTTSCHHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTT-----TEEEEECCCTTCEEECTTHH
T ss_pred             HHHHHHhcccCCcccHHHHHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCC-----CCEEEEEeCCCCccCChHHH
Confidence                                                1479999999999998741     14588999999865432111


Q ss_pred             ccccccC-CCCCC---CcccCCCcccc-hhhhhcccCCCCCCchhhHHHHHHHHHHHHhCCCCC
Q 003185          690 TCCIAHR-GIPAP---DVCVGTPRWMA-PEVLRAMHKPNLYGLEVDIWSYGCLLLELLTLQVPY  748 (840)
Q Consensus       690 ~~~~~~~-~~~~~---~~~vGT~~YmA-PEvL~~~~~~~~~s~kSDVWSLGvIL~ELLTG~~PF  748 (840)
                      ....... .....   ..+.....+.. |+....      .....+.|++|.++|.+.+|..+|
T Consensus       230 l~~~~~~~~~~~~~~~~~~l~~Y~~~~~~~~~~r------~~~~~~~~~l~~~~~~~~~g~~~~  287 (304)
T 3sg8_A          230 FISLMEDDEEYGMEFVSKILNHYKHKDIPTVLEK------YRMKEKYWSFEKIIYGKEYGYMDW  287 (304)
T ss_dssp             HHTTCCTTTSCCHHHHHHHHHHHTCSCHHHHHHH------HHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred             HHHHHhhccccCHHHHHHHHHHcCCCCcHHHHHH------HHHHHHHHHHHHHHHHHHcCCHHH
Confidence            1000000 00000   00000001122 333322      123478999999999999998876


No 260
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.48  E-value=8.5e-07  Score=95.77  Aligned_cols=133  Identities=21%  Similarity=0.172  Sum_probs=93.5

Q ss_pred             eeeeeecccCceEEEEEEECCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCC----CCcceeeeEEecCCCC
Q 003185          508 SSCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRH----SCIVEMYGHKISSKWL  583 (840)
Q Consensus       508 ~i~~~LG~G~fG~Vy~a~~~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~H----pNIV~l~g~~~~~~~~  583 (840)
                      ...+.++.|....||+.   +..+++|+...      .....    .+.+|+.+|..|.+    ..+.+++++    .. 
T Consensus        40 ~~v~~l~~G~~n~vy~v---g~~~vlR~~~~------~~~~~----~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~-  101 (320)
T 3r70_A           40 NELRYLSSGDDSDTFLC---NEQYVVKVPKR------DSVRI----SQKRELELYRFLENCKLSYQIPAVVYQ----SD-  101 (320)
T ss_dssp             SCEEEEEECSSEEEEEE---TTTEEEEEESS------HHHHH----HHHHHHHHHHHHTTSCCSSBCCCEEEE----CS-
T ss_pred             EEEEeCCCCCCceEEEE---CCEEEEEeCCc------HHHHH----HHHHHHHHHHHHHhcCCCCCcceEEec----CC-
Confidence            44678899999999998   67788887531      11122    24889999988875    223455544    11 


Q ss_pred             CCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhC-----------------
Q 003185          584 PSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSK-----------------  646 (840)
Q Consensus       584 p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs~-----------------  646 (840)
                                   .|+||||++|.+|.....       ..++......++.+++..|..||+.                 
T Consensus       102 -------------~~lvme~i~G~~l~~~~~-------~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~  161 (320)
T 3r70_A          102 -------------RFNIMKYIKGERITYEQY-------HKLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKK  161 (320)
T ss_dssp             -------------SCEEEECCCCBCCCHHHH-------TTSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHH
T ss_pred             -------------cEEEEeecCCcccccccc-------ccCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccch
Confidence                         289999999988864321       2356666667777777777777742                 


Q ss_pred             ----------------------------------------------CeecccCCCCcEEEecccccCCCCCeEEEeecCC
Q 003185          647 ----------------------------------------------HIMHRDIKSENILIDLERKKADGKPVVKLCDFDR  680 (840)
Q Consensus       647 ----------------------------------------------gIVHRDLKPeNILLd~~~~~~~~~~~vKL~DFGl  680 (840)
                                                                    .++|+|++|.|||++.+       ..+.|+||+.
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~-------~~~~~iD~~~  234 (320)
T 3r70_A          162 DKFLQDKKLLISILEKEQLLTDEMLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNN-------RLFGVIDFGD  234 (320)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETT-------EEEEECCCTT
T ss_pred             HHHHHHHHHHHHHHhhcccccccchHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECC-------ceEEEECCcc
Confidence                                                          24999999999999875       3479999999


Q ss_pred             ccccc
Q 003185          681 AVPLR  685 (840)
Q Consensus       681 A~~~~  685 (840)
                      +....
T Consensus       235 ~~~~~  239 (320)
T 3r70_A          235 FNVGD  239 (320)
T ss_dssp             CEEEC
T ss_pred             cccCC
Confidence            86543


No 261
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.23  E-value=1.2e-05  Score=86.48  Aligned_cols=139  Identities=16%  Similarity=0.143  Sum_probs=86.8

Q ss_pred             eeeecccCceEEEEEEECCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCC---CcceeeeEEecCCCCCCC
Q 003185          510 CDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHS---CIVEMYGHKISSKWLPSA  586 (840)
Q Consensus       510 ~~~LG~G~fG~Vy~a~~~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~Hp---NIV~l~g~~~~~~~~p~~  586 (840)
                      .+.++.|....||+.   +..+++|+..      .....    ..+.+|+.+|..|.+.   .|.+++.+.....     
T Consensus        24 v~~l~~G~~n~v~~v---g~~~VlR~~~------~~~~~----~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~-----   85 (306)
T 3tdw_A           24 VESLGEGFRNYAILV---NGDWVFRFPK------SQQGA----DELNKEIQLLPLLVGCVKVNIPQYVYIGKRSD-----   85 (306)
T ss_dssp             EEEEEECSSEEEEEE---TTTEEEEEES------SHHHH----HHHHHHHHHHHHHTTTCSSBCCCEEEEEECTT-----
T ss_pred             eeecCCCcceeEEEE---CCEEEEEecC------CchHH----HHHHHHHHHHHHHHhcCCCCCCCeEeecccCC-----
Confidence            456788999999998   6778888742      11222    3448999999999742   2556666654211     


Q ss_pred             CCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHh---------------------
Q 003185          587 DGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHS---------------------  645 (840)
Q Consensus       587 ~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs---------------------  645 (840)
                              ...++||||++|.+|....-       ..++......++.+++..|..||+                     
T Consensus        86 --------g~~~~v~e~i~G~~l~~~~~-------~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~  150 (306)
T 3tdw_A           86 --------GNPFVGYRKVQGQILGEDGM-------AVLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKIL  150 (306)
T ss_dssp             --------SCEEEEEECCCSEECHHHHH-------TTSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHH
T ss_pred             --------CceEEEEeccCCeECchhhh-------hhCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHH
Confidence                    12489999999987765321       112333333333333333333332                     


Q ss_pred             ---------------------------------------CCeecccCCCCcEEEecccccCCCCCeEEEeecCCcccc
Q 003185          646 ---------------------------------------KHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPL  684 (840)
Q Consensus       646 ---------------------------------------~gIVHRDLKPeNILLd~~~~~~~~~~~vKL~DFGlA~~~  684 (840)
                                                             ..++|+|++|.|||++.+..   ....+.|+||+.+..-
T Consensus       151 ~~~~~~~~~~~~~l~~~~~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~---~~~~~~~iD~~~a~~g  225 (306)
T 3tdw_A          151 LLSEAVEDQVFPLLDESLRDYLTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSR---QTPLTGIIDFGDAAIS  225 (306)
T ss_dssp             HHHHHHHHHTGGGSCHHHHHHHHHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCS---SCCEEEECCCTTCEEE
T ss_pred             HHHHHHHHhcccccchhhHHHHHHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCC---CCceEEEEehhhcCCC
Confidence                                                   24699999999999986210   1134689999987643


No 262
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.10  E-value=3.5e-05  Score=80.12  Aligned_cols=136  Identities=15%  Similarity=0.116  Sum_probs=88.4

Q ss_pred             CCceeeeeecccCce-EEEEEEE--CCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCC-CCCcceeeeEEecC
Q 003185          505 PSLSSCDEAGKSVSS-SLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALR-HSCIVEMYGHKISS  580 (840)
Q Consensus       505 ~~y~i~~~LG~G~fG-~Vy~a~~--~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~-HpNIV~l~g~~~~~  580 (840)
                      ..|+.. .+..|..| .||+...  .+..+++|+....       ...    .+.+|+.+|+.|. +--+.++++++...
T Consensus        25 ~g~~~~-~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~-------~~~----~~~~E~~~l~~l~~~vPVP~v~~~~~~~   92 (272)
T 4gkh_A           25 YGYRWA-RDNVGQSGATIYRLYGKPNAPELFLKHGKGS-------VAN----DVTDEMVRLNWLTAFMPLPTIKHFIRTP   92 (272)
T ss_dssp             TTCEEE-EEECSSSSCEEEEEECCTTCCCEEEEEEETH-------HHH----HHHHHHHHHHHHTTTSCCCCEEEEEEET
T ss_pred             cCCeEE-EccCCCcCCeEEEEEecCCCeEEEEEECCCC-------CHh----HHHHHHHHHHHhccCCCcCeEEEEEEEC
Confidence            344433 34445555 6998775  4567899986421       122    3478999998885 33467788877654


Q ss_pred             CCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHh---------------
Q 003185          581 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHS---------------  645 (840)
Q Consensus       581 ~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs---------------  645 (840)
                      +              ..|+|||+++|.++.+.....         ......+..+++..|..||.               
T Consensus        93 ~--------------~~~lvme~l~G~~~~~~~~~~---------~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~  149 (272)
T 4gkh_A           93 D--------------DAWLLTTAIPGKTAFQVLEEY---------PDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFR  149 (272)
T ss_dssp             T--------------EEEEEEECCCSEEHHHHHHHC---------GGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHH
T ss_pred             C--------------eEEEEEEeeCCccccccccCC---------HHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccc
Confidence            3              349999999998887765430         11223344455555555553               


Q ss_pred             ------------------------------------C-------CeecccCCCCcEEEecccccCCCCCeEEEeecCCcc
Q 003185          646 ------------------------------------K-------HIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAV  682 (840)
Q Consensus       646 ------------------------------------~-------gIVHRDLKPeNILLd~~~~~~~~~~~vKL~DFGlA~  682 (840)
                                                          .       .++|+|+.|.|||++.+       ..+-|+||+.+.
T Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~-------~~~~viDwe~a~  222 (272)
T 4gkh_A          150 LAQAQSRMNNGLVDASDFDDERNGWPVEQVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEG-------KLIGCIDVGRVG  222 (272)
T ss_dssp             HHHHHHHHHTTCCCGGGCCGGGTTCCHHHHHHHHHTTCCCCCCEEEECSCCCTTSEEEETT-------EEEEECCCTTCE
T ss_pred             hhhHHHHHHHhhhhhhhccccccchHHHHHHHHHHhcccccCCcEEEcCCCCCCeEEEECC-------eEEEEEECcccc
Confidence                                                1       27999999999999865       356799999774


No 263
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.02  E-value=2.4e-05  Score=86.37  Aligned_cols=77  Identities=13%  Similarity=0.111  Sum_probs=55.4

Q ss_pred             ceeeeeecccCceEEEEEEECCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCC--cceeeeEEecCCCCC
Q 003185          507 LSSCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSC--IVEMYGHKISSKWLP  584 (840)
Q Consensus       507 y~i~~~LG~G~fG~Vy~a~~~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpN--IV~l~g~~~~~~~~p  584 (840)
                      ....+.|+.|....+|+....+..+++|+....      .   .    +.+|+.++..|....  +.+++.++....   
T Consensus        43 ~~~i~~l~gG~~n~~y~v~~~g~~~vlK~~~~~------~---~----~~~E~~~l~~L~~~gvpvP~vl~~~~~~~---  106 (362)
T 3ovc_A           43 VSDLMQLSEGEESRAFSFDVGGRGYVLRVNSCA------D---G----FYKDRYVYRHFASAALPIPEVLDIGEFSE---  106 (362)
T ss_dssp             CEEEEEEEECSSEEEEEEEETTEEEEEEEESCC------H---H----HHHHHHHHHHHCCSSSCCCCEEEEEESSS---
T ss_pred             CceEEECCCCCcceEEEEEECCcEEEEEeCCch------h---h----HHHHHHHHHHHHhcCCCCceEEEeccCCC---
Confidence            345678999999999999988899999986311      1   2    378999999887433  456776655321   


Q ss_pred             CCCCCCccccceEEEEEeccCCCCH
Q 003185          585 SADGNPEHHLLQSAIFMEYVKGGSV  609 (840)
Q Consensus       585 ~~~g~~~~~~~~~~LVmEy~~gGSL  609 (840)
                                ...|+||||++|.+|
T Consensus       107 ----------g~~~lv~e~l~G~~l  121 (362)
T 3ovc_A          107 ----------SLTYCISRRAQGVTL  121 (362)
T ss_dssp             ----------SCEEEEEECCCSEET
T ss_pred             ----------CCeEEEEEecCCCCc
Confidence                      135999999997554


No 264
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=97.83  E-value=3.5e-05  Score=83.74  Aligned_cols=84  Identities=12%  Similarity=0.033  Sum_probs=53.8

Q ss_pred             eeeeee-cccCceEEEEEEEC--------CeeEEEEEEecccC--CCChHHHHHhHHhHHHHHHHHHhCC-C--CCccee
Q 003185          508 SSCDEA-GKSVSSSLFRCKFG--------SADAAAKVRTLKVC--GSSADEIRNFEYSCLGEVRMLGALR-H--SCIVEM  573 (840)
Q Consensus       508 ~i~~~L-G~G~fG~Vy~a~~~--------~~~vAVKI~~lk~~--~~~~~~~~~f~~~~~rEi~iL~~L~-H--pNIV~l  573 (840)
                      ...+.| +.|....+|+....        +..+++|+......  ...   .    ..+.+|+.+|+.|. +  -.+.++
T Consensus        23 ~~~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~---~----~~~~~E~~~l~~L~~~~~vpvP~v   95 (357)
T 3ats_A           23 TVESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFP---T----YRLDHQFEVIRLVGELTDVPVPRV   95 (357)
T ss_dssp             EEEEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSS---C----CCHHHHHHHHHHHHHHCCSCCCCE
T ss_pred             EEEEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCc---h----hHHHHHHHHHHHHhhcCCCCCCcE
Confidence            345778 88999999998764        66788887532210  000   0    12377888888885 3  356778


Q ss_pred             eeEEecCCCCCCCCCCCccccceEEEEEeccCCCCH
Q 003185          574 YGHKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSV  609 (840)
Q Consensus       574 ~g~~~~~~~~p~~~g~~~~~~~~~~LVmEy~~gGSL  609 (840)
                      +.+......           ....|+||||++|..|
T Consensus        96 ~~~~~~~~~-----------~g~~~~v~e~l~G~~l  120 (357)
T 3ats_A           96 RWIETTGDV-----------LGTPFFLMDYVEGVVP  120 (357)
T ss_dssp             EEEECSSTT-----------TSSCEEEEECCCCBCC
T ss_pred             EEEccCCCc-----------cCCceEEEEecCCCCh
Confidence            877654321           1234899999998654


No 265
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=97.79  E-value=0.00027  Score=75.57  Aligned_cols=76  Identities=18%  Similarity=0.112  Sum_probs=55.0

Q ss_pred             eeeeeecccCceEEEEEEE-CCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCC---CcceeeeEEecCCCC
Q 003185          508 SSCDEAGKSVSSSLFRCKF-GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHS---CIVEMYGHKISSKWL  583 (840)
Q Consensus       508 ~i~~~LG~G~fG~Vy~a~~-~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~Hp---NIV~l~g~~~~~~~~  583 (840)
                      .-.+.|+.|.++.||++.. .+..+++|+.....  .  ...    ..+.+|++.|+.|.+.   .+++++++..     
T Consensus        18 ~~~~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~--~--~~~----~~~~~E~~~L~~L~~~~~v~vP~v~~~~~-----   84 (288)
T 3d1u_A           18 AAVAERGHSHRWHLYRVELADGTPLFVKALPDDA--P--ALD----GLFRAEALGLDWLGRSFGSPVPQVAGWDD-----   84 (288)
T ss_dssp             EEEEEEEEETTEEEEEEEETTSCEEEEEECCTTC--C--CCT----THHHHHHHHHHHHTCSTTCCSCCEEEEET-----
T ss_pred             cceeeeCCcchhheEEEEeCCCCeEEEEecCCCC--c--chh----HHHHHHHHHHHHHHhcCCCCcCeEEEecC-----
Confidence            3467899999999999987 46789999853211  1  011    2348899999999865   5778877631     


Q ss_pred             CCCCCCCccccceEEEEEeccCCCCH
Q 003185          584 PSADGNPEHHLLQSAIFMEYVKGGSV  609 (840)
Q Consensus       584 p~~~g~~~~~~~~~~LVmEy~~gGSL  609 (840)
                                   .++||||++|+++
T Consensus        85 -------------~~lvme~l~g~~~   97 (288)
T 3d1u_A           85 -------------RTLAMEWVDERPP   97 (288)
T ss_dssp             -------------TEEEEECCCCCCC
T ss_pred             -------------cEEEEEecccCCC
Confidence                         2899999998764


No 266
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.67  E-value=0.00017  Score=79.77  Aligned_cols=82  Identities=11%  Similarity=-0.029  Sum_probs=47.1

Q ss_pred             eeeeecccCceEEEEEEE--CCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCC--CC-cceeeeEEecCCCC
Q 003185          509 SCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRH--SC-IVEMYGHKISSKWL  583 (840)
Q Consensus       509 i~~~LG~G~fG~Vy~a~~--~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~H--pN-IV~l~g~~~~~~~~  583 (840)
                      ..+.||.|.++.||++..  .+..+++|........... .......++..|+.+|+.+..  |. +.+++.+.  ... 
T Consensus        34 ~~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~-~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~d--~~~-  109 (397)
T 2olc_A           34 TCQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGE-SWPLTIDRARIESSALIRQGEHVPHLVPRVFYSD--TEM-  109 (397)
T ss_dssp             EEEECCSSSSEEEEEEEC----CEEEEEEECCC--------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEEE--TTT-
T ss_pred             EEEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCC-CCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEEc--CCc-
Confidence            356899999999999954  5678999975422110000 000011234778888888742  33 34555432  221 


Q ss_pred             CCCCCCCccccceEEEEEeccCCC
Q 003185          584 PSADGNPEHHLLQSAIFMEYVKGG  607 (840)
Q Consensus       584 p~~~g~~~~~~~~~~LVmEy~~gG  607 (840)
                                   .++||||+++.
T Consensus       110 -------------~~lvmE~l~g~  120 (397)
T 2olc_A          110 -------------AVTVMEDLSHL  120 (397)
T ss_dssp             -------------TEEEECCCTTS
T ss_pred             -------------cEEEEEeCCCc
Confidence                         28999999863


No 267
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.64  E-value=0.00072  Score=72.14  Aligned_cols=30  Identities=20%  Similarity=0.339  Sum_probs=25.6

Q ss_pred             CCeecccCCCCcEEEecccccCCCCCeEEEeecCCcc
Q 003185          646 KHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAV  682 (840)
Q Consensus       646 ~gIVHRDLKPeNILLd~~~~~~~~~~~vKL~DFGlA~  682 (840)
                      ..++|+|+++.|||++.+       ..+.|+||+.+.
T Consensus       222 ~~l~HgD~~~~Nil~~~~-------~~~~lIDfe~a~  251 (346)
T 2q83_A          222 PNLCHQDYGTGNTLLGEN-------EQIWVIDLDTVS  251 (346)
T ss_dssp             CCEECSSCSTTSEEECGG-------GCEEECCCTTCE
T ss_pred             CceecCCCCcccEEEeCC-------CcEEEEehhhcc
Confidence            579999999999999765       349999999774


No 268
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=97.26  E-value=0.0016  Score=69.15  Aligned_cols=71  Identities=13%  Similarity=0.145  Sum_probs=43.6

Q ss_pred             eeeecccCceEEEEEEECCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCc-ceeeeEEecCCCCCCCCC
Q 003185          510 CDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCI-VEMYGHKISSKWLPSADG  588 (840)
Q Consensus       510 ~~~LG~G~fG~Vy~a~~~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNI-V~l~g~~~~~~~~p~~~g  588 (840)
                      .+.|+.|....+|++    ..+++|+.....     .....    ..+|+.+++.+...++ .+++++....        
T Consensus        23 i~~l~gG~tN~~~~~----~~~vlR~~~~~~-----~~~~~----r~~E~~~l~~l~~~g~~P~~~~~~~~~--------   81 (301)
T 3dxq_A           23 PLERLGGLTNLVFRA----GDLCLRIPGKGT-----EEYIN----RANEAVAAREAAKAGVSPEVLHVDPAT--------   81 (301)
T ss_dssp             CEEEESCSSEEEEEE----TTEEEEEECC---------CCC----HHHHHHHHHHHHHTTSSCCEEEECTTT--------
T ss_pred             eeEcCCcccccccee----eeEEEECCCCCc-----cceeC----HHHHHHHHHHHHHcCCCCceEEEECCC--------
Confidence            788999999999999    678888864321     11111    1567777777752222 4555543211        


Q ss_pred             CCccccceEEEEEecc-CCCCH
Q 003185          589 NPEHHLLQSAIFMEYV-KGGSV  609 (840)
Q Consensus       589 ~~~~~~~~~~LVmEy~-~gGSL  609 (840)
                              -++||||+ +|.+|
T Consensus        82 --------~~~v~e~i~~g~~l   95 (301)
T 3dxq_A           82 --------GVMVTRYIAGAQTM   95 (301)
T ss_dssp             --------CCEEEECCTTCEEC
T ss_pred             --------CEEEEeecCCCccC
Confidence                    17899999 66443


No 269
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.22  E-value=0.0017  Score=72.50  Aligned_cols=81  Identities=9%  Similarity=0.070  Sum_probs=48.4

Q ss_pred             HhCCeecccCCCCcEEEecccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCcccC--CCcccchhhhhcccC
Q 003185          644 HSKHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVG--TPRWMAPEVLRAMHK  721 (840)
Q Consensus       644 Hs~gIVHRDLKPeNILLd~~~~~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~vG--T~~YmAPEvL~~~~~  721 (840)
                      +...++|+|++|.|||++.+       . ++|+||+.+..-.......           ....  ...|++|+...... 
T Consensus       230 ~~~~liHGDl~~~Nil~~~~-------~-~~lID~e~a~~G~p~~Dla-----------~~l~~~~~~~~~~~~~~~~~-  289 (420)
T 2pyw_A          230 RAQALIHGDLHTGSVMVTQD-------S-TQVIDPEFSFYGPMGFDIG-----------AYLGNLILAFFAQDGHATQE-  289 (420)
T ss_dssp             BCCEEECSCCSGGGEEECSS-------C-EEECCCTTCEEECHHHHHH-----------HHHHHHHHHHHHGGGGCCSS-
T ss_pred             CCCeEEecCCCCCcEEEeCC-------C-CEEEeCcccccCchHHHHH-----------HHHHHHHHHHHhcccccccc-
Confidence            45689999999999999765       2 8999999886533211100           0000  12456665543100 


Q ss_pred             CCCCCchhhHHHHHHHHHHHHhC
Q 003185          722 PNLYGLEVDIWSYGCLLLELLTL  744 (840)
Q Consensus       722 ~~~~s~kSDVWSLGvIL~ELLTG  744 (840)
                      .........+..+...+|+.+++
T Consensus       290 ~~~~~~~~~~~~~~~~~~~~y~~  312 (420)
T 2pyw_A          290 NDRKEYKQWILRTIEQTWNLFNK  312 (420)
T ss_dssp             CCSHHHHHHHHHHHHHHHHHHHH
T ss_pred             cchHHHHHHHHHHHHHHHHHHHH
Confidence            01112346667888888888764


No 270
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=96.90  E-value=0.0046  Score=66.42  Aligned_cols=36  Identities=33%  Similarity=0.400  Sum_probs=27.1

Q ss_pred             CCeecccCCCCcEEEecccccCCCCCeEEEeecCCcccc
Q 003185          646 KHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPL  684 (840)
Q Consensus       646 ~gIVHRDLKPeNILLd~~~~~~~~~~~vKL~DFGlA~~~  684 (840)
                      ..++|||+.+.|||++.+..   +...+.|+||+.+..-
T Consensus       183 ~~lvHgD~~~~Nil~~~~~~---~~~~~~lIDf~~a~~G  218 (333)
T 3csv_A          183 MVFVHRDFHAQNLLWLPERE---GLARVGVIDFQDAKLG  218 (333)
T ss_dssp             CEEECSCCSGGGEEECTTSC---GGGGEEECCCTTCEEE
T ss_pred             CeeEeCCcCcccEEeccCcC---CCCCeEEEeCCCcCcC
Confidence            47999999999999976310   0135899999988643


No 271
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=96.89  E-value=0.0036  Score=67.72  Aligned_cols=76  Identities=12%  Similarity=0.036  Sum_probs=56.6

Q ss_pred             eeeeecccCceEEEEEEECCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCC---CCCcceeeeEEecCCCCCC
Q 003185          509 SCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALR---HSCIVEMYGHKISSKWLPS  585 (840)
Q Consensus       509 i~~~LG~G~fG~Vy~a~~~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~---HpNIV~l~g~~~~~~~~p~  585 (840)
                      -.+.|+.|.+..+|+....+..+++|+....       ..    ..+.+|+..|+.|.   ...+++++.+.....    
T Consensus        40 ~~~~l~gG~~n~~y~v~~~~~~~vlK~~~~~-------~~----~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g----  104 (312)
T 3jr1_A           40 HKEKLYSGEMNEIWLINDEVQTVFVKINERS-------YR----SMFRAEADQLALLAKTNSINVPLVYGIGNSQG----  104 (312)
T ss_dssp             EEEEECCSSSSEEEEEESSSCEEEEEEEEGG-------GH----HHHHHHHHHHHHHHHTTSSBCCCEEEEEECSS----
T ss_pred             eeEEeCCccceeeeEEEECCCeEEEEeCCcc-------cH----HHHHHHHHHHHHHHhhCCCCcceEEEEeecCC----
Confidence            4677899999999999988888999986521       11    23478999888884   356788888765432    


Q ss_pred             CCCCCccccceEEEEEeccCCCCH
Q 003185          586 ADGNPEHHLLQSAIFMEYVKGGSV  609 (840)
Q Consensus       586 ~~g~~~~~~~~~~LVmEy~~gGSL  609 (840)
                                ..++||||++|..+
T Consensus       105 ----------~~~lvme~l~G~~~  118 (312)
T 3jr1_A          105 ----------HSFLLLEALNKSKN  118 (312)
T ss_dssp             ----------EEEEEEECCCCCCC
T ss_pred             ----------ceEEEEEeccCCCC
Confidence                      35999999998753


No 272
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=96.68  E-value=0.0077  Score=64.08  Aligned_cols=151  Identities=17%  Similarity=0.139  Sum_probs=78.0

Q ss_pred             ceeeeeecccCceEEEEEEECCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCC--cceeeeEEecCCCCC
Q 003185          507 LSSCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSC--IVEMYGHKISSKWLP  584 (840)
Q Consensus       507 y~i~~~LG~G~fG~Vy~a~~~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpN--IV~l~g~~~~~~~~p  584 (840)
                      ..-.+.|+.|....+|+....+..+++|+.....      ...    .+..|+.++..|...+  +.+++... ....+ 
T Consensus        24 ~~~~~~i~~G~~n~~~~v~~~~g~~vlk~~~~~~------~~~----~l~~e~~~l~~L~~~g~~vP~~~~~~-~g~~~-   91 (322)
T 2ppq_A           24 LTSYKGIAEGVENSNFLLHTTKDPLILTLYEKRV------EKN----DLPFFLGLMQHLAAKGLSCPLPLPRK-DGELL-   91 (322)
T ss_dssp             EEEEEEECC---EEEEEEEESSCCEEEEEECC---------CC----HHHHHHHHHHHHHHTTCCCCCBCCBT-TCCSC-
T ss_pred             ceEeeccCCCcccceEEEEeCCccEEEEEeCCCC------CHH----HHHHHHHHHHHHHHCCCCCCcccCCC-CCCEE-
Confidence            3456778889999999998877788999865310      111    2256777777774222  23333210 00000 


Q ss_pred             CCCCCCccccceEEEEEeccCCCCHH-----------HHH---HHHhcc-CCC---CCC---HHHHHH------------
Q 003185          585 SADGNPEHHLLQSAIFMEYVKGGSVK-----------NYI---EKLSET-GEK---HVS---VKLALF------------  631 (840)
Q Consensus       585 ~~~g~~~~~~~~~~LVmEy~~gGSL~-----------~~L---~~~~~~-~~~---~ls---~~~~~~------------  631 (840)
                            .......++||+|++|..+.           +.+   +..... ...   ...   +.....            
T Consensus        92 ------~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~  165 (322)
T 2ppq_A           92 ------GELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVEKG  165 (322)
T ss_dssp             ------EEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTSTT
T ss_pred             ------EEECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhhhh
Confidence                  00012358999999975421           111   111000 000   011   111000            


Q ss_pred             HHHHHHHHHHHHHh-------CCeecccCCCCcEEEecccccCCCCCeEEEeecCCcc
Q 003185          632 IAQDVAAALVELHS-------KHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAV  682 (840)
Q Consensus       632 Ia~QIa~AL~yLHs-------~gIVHRDLKPeNILLd~~~~~~~~~~~vKL~DFGlA~  682 (840)
                      +...+...+.+++.       .+++|+|+.+.|||++.+       ..+.|+||+.+.
T Consensus       166 l~~~l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~-------~~~~lIDf~~a~  216 (322)
T 2ppq_A          166 LREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGD-------ELSGLIDFYFAC  216 (322)
T ss_dssp             HHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETT-------EEEEECCCTTCE
T ss_pred             hHHHHHHHHHHHHhhCcccCCcccCCCCCCccCEEEeCC-------ceEEEecchhcc
Confidence            00113444555552       369999999999999865       235799999764


No 273
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=96.63  E-value=0.023  Score=59.72  Aligned_cols=76  Identities=18%  Similarity=0.147  Sum_probs=51.1

Q ss_pred             ceeeeeecccCceEEEEEEE-CCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCC---CCcceeeeEEecCCC
Q 003185          507 LSSCDEAGKSVSSSLFRCKF-GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRH---SCIVEMYGHKISSKW  582 (840)
Q Consensus       507 y~i~~~LG~G~fG~Vy~a~~-~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~H---pNIV~l~g~~~~~~~  582 (840)
                      ..-.+.+|.|..+.||+... .++.+++|+..-...  .  .    ...+.+|++.|+.|.-   --+.+++++..    
T Consensus        17 v~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~--~--~----~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~~----   84 (288)
T 3f7w_A           17 VAAVAERGHSHRWHLYRVELADGTPLFVKALPDDAP--A--L----DGLFRAEALGLDWLGRSFGSPVPQVAGWDD----   84 (288)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCC--C--C----TTHHHHHHHHHHHHTCSTTCCSCCEEEEET----
T ss_pred             eEEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCc--c--h----hhHHHHHHHHHHHHHhhCCCCcceEEeccC----
Confidence            45578899999999999997 567899997432211  1  0    1124789999988852   23455555421    


Q ss_pred             CCCCCCCCccccceEEEEEeccCCCC
Q 003185          583 LPSADGNPEHHLLQSAIFMEYVKGGS  608 (840)
Q Consensus       583 ~p~~~g~~~~~~~~~~LVmEy~~gGS  608 (840)
                                    .++||||+.++.
T Consensus        85 --------------~~lv~e~l~~~~   96 (288)
T 3f7w_A           85 --------------RTLAMEWVDERP   96 (288)
T ss_dssp             --------------TEEEEECCCCCC
T ss_pred             --------------ceEEEEeecccC
Confidence                          189999998764


No 274
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=96.25  E-value=0.0085  Score=65.43  Aligned_cols=72  Identities=10%  Similarity=0.180  Sum_probs=42.6

Q ss_pred             eeeecccCceEEEEEEECC----------eeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCC-cceeeeEEe
Q 003185          510 CDEAGKSVSSSLFRCKFGS----------ADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSC-IVEMYGHKI  578 (840)
Q Consensus       510 ~~~LG~G~fG~Vy~a~~~~----------~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpN-IV~l~g~~~  578 (840)
                      .+.|+.|....+|++...+          ..+++|+....     .....    ....|..+++.|...+ +.++++.. 
T Consensus        38 ~~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~-----~~~~~----~~~~E~~~l~~L~~~g~~P~~~~~~-  107 (369)
T 3c5i_A           38 VKQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKH-----VDELY----NTISEFEVYKTMSKYKIAPQLLNTF-  107 (369)
T ss_dssp             EEEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTT-----GGGTS----CHHHHHHHHHHHHHTTSSCCEEEEE-
T ss_pred             EEEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCC-----cccee----cHHHHHHHHHHHHhcCCCCceEEec-
Confidence            5678888889999998754          57888875321     11111    1256888888775333 44666543 


Q ss_pred             cCCCCCCCCCCCccccceEEEEEeccCCCC
Q 003185          579 SSKWLPSADGNPEHHLLQSAIFMEYVKGGS  608 (840)
Q Consensus       579 ~~~~~p~~~g~~~~~~~~~~LVmEy~~gGS  608 (840)
                       .+                ++||||++|.+
T Consensus       108 -~~----------------~~v~e~i~G~~  120 (369)
T 3c5i_A          108 -NG----------------GRIEEWLYGDP  120 (369)
T ss_dssp             -TT----------------EEEEECCCSEE
T ss_pred             -CC----------------cEEEEEecCCc
Confidence             11                78999998743


No 275
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=96.10  E-value=0.052  Score=55.96  Aligned_cols=101  Identities=15%  Similarity=0.117  Sum_probs=63.9

Q ss_pred             CHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHh-CCeecccCCCCcEEEecccccCCCCCeEEEeecCCcccccc
Q 003185          608 SVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHS-KHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRS  686 (840)
Q Consensus       608 SL~~~L~~~~~~~~~~ls~~~~~~Ia~QIa~AL~yLHs-~gIVHRDLKPeNILLd~~~~~~~~~~~vKL~DFGlA~~~~~  686 (840)
                      ||.+.|..+    +.+++++++|.++.|.+.+|.-+-. +.-..+=+-|..|+|..+|.       |-+.+ +.+.    
T Consensus        34 SL~eIL~~~----~~PlsEEqaWALc~Qc~~~L~~~~~~~~~~~~i~~~~~i~l~~dG~-------V~f~~-~~s~----   97 (229)
T 2yle_A           34 SLEEILRLY----NQPINEEQAWAVCYQCCGSLRAAARRRQPRHRVRSAAQIRVWRDGA-------VTLAP-AADD----   97 (229)
T ss_dssp             EHHHHHHHH----TSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCSGGGEEEETTSC-------EEECC-C-------
T ss_pred             cHHHHHHHc----CCCcCHHHHHHHHHHHHHHHHhhhhcccCCceecCCcceEEecCCc-------eeccc-cccc----
Confidence            899999863    4689999999999999999887621 12122334468888888743       55442 1110    


Q ss_pred             cccccccccCCCCCCCcccCCCcccchhhhhcccCCCCCCchhhHHHHHHHHHHHHhCCCC
Q 003185          687 FLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLTLQVP  747 (840)
Q Consensus       687 ~~~~~~~~~~~~~~~~~~vGT~~YmAPEvL~~~~~~~~~s~kSDVWSLGvIL~ELLTG~~P  747 (840)
                                        .....+.|||.+.     ...+.+.=|||||++||..+-=..|
T Consensus        98 ------------------~~~~~~~~pe~~~-----~~~te~~~IysLG~tLY~ALDygL~  135 (229)
T 2yle_A           98 ------------------AGEPPPVAGKLGY-----SQCMETEVIESLGIIIYKALDYGLK  135 (229)
T ss_dssp             ---------------------------CCSS-----SSSCHHHHHHHHHHHHHHHHTTTCC
T ss_pred             ------------------ccccCCCChhhcc-----ccchHHHHHHHHHHHHHHHhhcCCC
Confidence                              0223566888753     2457899999999999999864433


No 276
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=96.05  E-value=0.055  Score=61.58  Aligned_cols=72  Identities=17%  Similarity=0.110  Sum_probs=46.9

Q ss_pred             eeeecccCceEEEEEEECC--eeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCc-ceeeeEEecCCCCCCC
Q 003185          510 CDEAGKSVSSSLFRCKFGS--ADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCI-VEMYGHKISSKWLPSA  586 (840)
Q Consensus       510 ~~~LG~G~fG~Vy~a~~~~--~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNI-V~l~g~~~~~~~~p~~  586 (840)
                      .+.|+.|-...+|++...+  ..+++|+......    ..+. .    .+|+.++..|...+| .++++.+.  +     
T Consensus       113 i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~----~~id-R----~~E~~vl~~L~~~gl~P~ll~~~~--~-----  176 (458)
T 2qg7_A          113 FQIINGGITNILIKVKDMSKQAKYLIRLYGPKTD----EIIN-R----EREKKISCILYNKNIAKKIYVFFT--N-----  176 (458)
T ss_dssp             EEEECC--CEEEEEEEETTTTEEEEEEEECC-CC----SCSC-H----HHHHHHHHHHTTSSSBCCEEEEET--T-----
T ss_pred             EEEcCCCeEeEEEEEEECCCCceEEEEECCCChh----hhcC-H----HHHHHHHHHHHhcCCCCCEEEEeC--C-----
Confidence            5678889999999999876  7889998632110    0000 1    578899998875444 56776652  1     


Q ss_pred             CCCCccccceEEEEEeccCCCC
Q 003185          587 DGNPEHHLLQSAIFMEYVKGGS  608 (840)
Q Consensus       587 ~g~~~~~~~~~~LVmEy~~gGS  608 (840)
                                 ++||||++|.+
T Consensus       177 -----------G~v~e~I~G~~  187 (458)
T 2qg7_A          177 -----------GRIEEFMDGYA  187 (458)
T ss_dssp             -----------EEEEECCCSEE
T ss_pred             -----------eEEEEeeCCcc
Confidence                       56999998743


No 277
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=95.86  E-value=0.036  Score=62.37  Aligned_cols=71  Identities=15%  Similarity=0.258  Sum_probs=46.8

Q ss_pred             eeeeecccCceEEEEEEEC---------CeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCc-ceeeeEEe
Q 003185          509 SCDEAGKSVSSSLFRCKFG---------SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCI-VEMYGHKI  578 (840)
Q Consensus       509 i~~~LG~G~fG~Vy~a~~~---------~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNI-V~l~g~~~  578 (840)
                      -.+.|+.|-...||++...         +..+++|+....   ..   ...+    .+|+.+++.|...+| .++++.+.
T Consensus        77 ~v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~---~~---~~~l----i~E~~~l~~L~~~g~~P~l~~~~~  146 (429)
T 1nw1_A           77 RISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP---ET---ESHL----VAESVIFTLLSERHLGPKLYGIFS  146 (429)
T ss_dssp             EEEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC---CC---HHHH----HHHHHHHHHHHHTTSSSCEEEEET
T ss_pred             EEEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC---Cc---HHHH----HHHHHHHHHHHhCCCCCcEEEEeC
Confidence            3567888999999999874         467888886311   11   0122    578888888863333 56666542


Q ss_pred             cCCCCCCCCCCCccccceEEEEEeccCCC
Q 003185          579 SSKWLPSADGNPEHHLLQSAIFMEYVKGG  607 (840)
Q Consensus       579 ~~~~~p~~~g~~~~~~~~~~LVmEy~~gG  607 (840)
                        +                ++||||++|.
T Consensus       147 --~----------------g~v~e~l~G~  157 (429)
T 1nw1_A          147 --G----------------GRLEEYIPSR  157 (429)
T ss_dssp             --T----------------EEEECCCCEE
T ss_pred             --C----------------CEEEEEeCCc
Confidence              1                5899999863


No 278
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=95.51  E-value=0.034  Score=61.76  Aligned_cols=144  Identities=19%  Similarity=0.218  Sum_probs=78.3

Q ss_pred             eeeecccCceEEEEEEEC---------CeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCC-CCCcceeeeEEec
Q 003185          510 CDEAGKSVSSSLFRCKFG---------SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALR-HSCIVEMYGHKIS  579 (840)
Q Consensus       510 ~~~LG~G~fG~Vy~a~~~---------~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~-HpNIV~l~g~~~~  579 (840)
                      .+.|..|-...+|++...         +..+++++..  ....   ...    .+.+|..+++.|. +.-..++++.+. 
T Consensus        55 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g--~~~~---~~~----~~~rE~~vl~~L~~~gv~P~ll~~~~-  124 (379)
T 3feg_A           55 VYPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYG--AILQ---GVD----SLVLESVMFAILAERSLGPQLYGVFP-  124 (379)
T ss_dssp             CEEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC-----C---CHH----HHHHHHHHHHHHHHTTSSCCEEEEET-
T ss_pred             EEEcCCcccccEEEEEeCCCccccCCCCCeEEEEECC--Cccc---hHH----HHHHHHHHHHHHHhcCCCCeEEEEcC-
Confidence            356777888899998863         3578888742  1111   111    2268999888885 322356666542 


Q ss_pred             CCCCCCCCCCCccccceEEEEEeccCCCCHH--------------HHHHHHhcc---CCCCCC--HHHHHHHHHHHHH--
Q 003185          580 SKWLPSADGNPEHHLLQSAIFMEYVKGGSVK--------------NYIEKLSET---GEKHVS--VKLALFIAQDVAA--  638 (840)
Q Consensus       580 ~~~~p~~~g~~~~~~~~~~LVmEy~~gGSL~--------------~~L~~~~~~---~~~~ls--~~~~~~Ia~QIa~--  638 (840)
                       +                .+||||++|.+|.              +.|.++-..   ......  +..+.+++.++..  
T Consensus       125 -~----------------g~v~e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~  187 (379)
T 3feg_A          125 -E----------------GRLEQYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLP  187 (379)
T ss_dssp             -T----------------EEEEECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCC
T ss_pred             -C----------------ccEEEEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhcc
Confidence             1                4899999875432              112211111   011122  3455555554422  


Q ss_pred             -----------------HHHHHH----h----CCeecccCCCCcEEEecccccCCCCCeEEEeecCCccc
Q 003185          639 -----------------ALVELH----S----KHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVP  683 (840)
Q Consensus       639 -----------------AL~yLH----s----~gIVHRDLKPeNILLd~~~~~~~~~~~vKL~DFGlA~~  683 (840)
                                       .+..|.    .    ..++|+|+.+.|||++.+..   ....+.|+||..+..
T Consensus       188 ~~~~~~~~~~~~~~l~~~~~~L~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~---~~~~~~~IDwE~a~~  254 (379)
T 3feg_A          188 PTGLPEMNLLEMYSLKDEMGNLRKLLESTPSPVVFCHNDIQEGNILLLSEPE---NADSLMLVDFEYSSY  254 (379)
T ss_dssp             CCSCCSCCHHHHTTHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEESCC------CCEEECCCTTCEE
T ss_pred             CcccchhhhhhhHHHHHHHHHHHHHHhhcCCCcEEEcCCCCCCeEEEcCCCC---ccCcEEEEecccCCc
Confidence                             233332    2    25999999999999986511   123589999998863


No 279
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=95.44  E-value=0.067  Score=56.84  Aligned_cols=79  Identities=13%  Similarity=0.016  Sum_probs=44.4

Q ss_pred             eeecccCceEEEEEEEC-CeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCC--CcceeeeEEecCCCCCCCC
Q 003185          511 DEAGKSVSSSLFRCKFG-SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHS--CIVEMYGHKISSKWLPSAD  587 (840)
Q Consensus       511 ~~LG~G~fG~Vy~a~~~-~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~Hp--NIV~l~g~~~~~~~~p~~~  587 (840)
                      ..|+ |....||+.... +..+++|+.....  ...   .    .+..|+.++..|...  .+++++..  ....+    
T Consensus        32 ~~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~--~~~---~----~~~~E~~~~~~L~~~g~~vp~~~~~--~g~~~----   95 (328)
T 1zyl_A           32 TPLN-SYENRVYQFQDEDRRRFVVKFYRPER--WTA---D----QILEEHQFALQLVNDEVPVAAPVAF--NGQTL----   95 (328)
T ss_dssp             EEEC-CSSSEEEEECCTTCCCEEEEEECTTT--SCH---H----HHHHHHHHHHHHHHTTCSBCCCCCB--TTBSC----
T ss_pred             Eeec-CcccceEEEEcCCCCEEEEEEcCCCC--CCH---H----HHHHHHHHHHHHHHcCCeecceeec--CCcEE----
Confidence            4566 888899998764 4579999864221  111   1    225677777777522  24444443  11111    


Q ss_pred             CCCccccceEEEEEeccCCCC
Q 003185          588 GNPEHHLLQSAIFMEYVKGGS  608 (840)
Q Consensus       588 g~~~~~~~~~~LVmEy~~gGS  608 (840)
                         .......++||+|++|..
T Consensus        96 ---~~~~g~~~~l~~~i~G~~  113 (328)
T 1zyl_A           96 ---LNHQGFYFAVFPSVGGRQ  113 (328)
T ss_dssp             ---EEETTEEEEEEECCCCEE
T ss_pred             ---EEECCEEEEEEEecCCCC
Confidence               001224588999998743


No 280
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=94.47  E-value=0.15  Score=55.18  Aligned_cols=32  Identities=25%  Similarity=0.427  Sum_probs=26.5

Q ss_pred             CCeecccCCCCcEEEecccccCCCCCeEEEeecCCcccc
Q 003185          646 KHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPL  684 (840)
Q Consensus       646 ~gIVHRDLKPeNILLd~~~~~~~~~~~vKL~DFGlA~~~  684 (840)
                      ..++|+|+.+.|||++.+       ..+.|+||+.+...
T Consensus       206 ~~~~HgD~~~~N~l~~~~-------~~~~~iD~e~~~~~  237 (339)
T 3i1a_A          206 YVLCHSDIHAGNVLVGNE-------ESIYIIDWDEPMLA  237 (339)
T ss_dssp             CEEECSCCCGGGEEECGG-------GCEEECCCSSCEEE
T ss_pred             ceeEeCCCCcCCEEEeCC-------CeEEEEECCCCeeC
Confidence            369999999999999865       34899999887644


No 281
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=94.22  E-value=0.19  Score=56.29  Aligned_cols=36  Identities=28%  Similarity=0.339  Sum_probs=26.5

Q ss_pred             CeecccCCCCcEEEecccccCCCCCeEEEeecCCccc
Q 003185          647 HIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVP  683 (840)
Q Consensus       647 gIVHRDLKPeNILLd~~~~~~~~~~~vKL~DFGlA~~  683 (840)
                      .++|+|+.+.|||++.+... .....+.|+||..|..
T Consensus       245 v~~H~Dl~~~Nil~~~~~~~-~~~~~~~lID~E~a~~  280 (401)
T 3f2s_A          245 VFCHNDCQEGNILLLEGREN-SEKQKLMLIDFEYSSY  280 (401)
T ss_dssp             EEECSCCCGGGEEEETTGGG-CSSSCEEECCCTTCEE
T ss_pred             eEEeccCCcccEEEcCCccc-CcccceEEEeeccCCc
Confidence            59999999999999865210 1123599999988753


No 282
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=93.12  E-value=0.66  Score=52.15  Aligned_cols=73  Identities=10%  Similarity=0.114  Sum_probs=46.6

Q ss_pred             eeeeecccCceEEEEEEEC---------CeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCC-CCCcceeeeEEe
Q 003185          509 SCDEAGKSVSSSLFRCKFG---------SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALR-HSCIVEMYGHKI  578 (840)
Q Consensus       509 i~~~LG~G~fG~Vy~a~~~---------~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~-HpNIV~l~g~~~  578 (840)
                      -.+.|..|-...+|+....         +..+++++.....     ...-.    ..+|..+++.|. +.-..++++.+.
T Consensus        74 ~v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t-----~~~id----R~~E~~~l~~L~~~gi~P~l~~~~~  144 (424)
T 3mes_A           74 EVKQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHV-----GKFYD----SKVELDVFRYLSNINIAPNIIADFP  144 (424)
T ss_dssp             EEEEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC------CCCC----HHHHHHHHHHHHHTTSSCCEEEEET
T ss_pred             EEEEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCc-----chhcC----HHHHHHHHHHHHhcCCCCCEEEEcC
Confidence            3567778889999999876         5778888753211     11101    157888888875 322455565331


Q ss_pred             cCCCCCCCCCCCccccceEEEEEeccCCCC
Q 003185          579 SSKWLPSADGNPEHHLLQSAIFMEYVKGGS  608 (840)
Q Consensus       579 ~~~~~p~~~g~~~~~~~~~~LVmEy~~gGS  608 (840)
                        +                ++||||++|.+
T Consensus       145 --~----------------~~I~efI~G~~  156 (424)
T 3mes_A          145 --E----------------GRIEEFIDGEP  156 (424)
T ss_dssp             --T----------------EEEEECCCSEE
T ss_pred             --C----------------CEEEEEeCCcc
Confidence              1                78999999855


No 283
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=87.47  E-value=1.9  Score=47.62  Aligned_cols=35  Identities=29%  Similarity=0.357  Sum_probs=25.9

Q ss_pred             eecccCCCCcEEEecccccCCCCCeEEEeecCCccc
Q 003185          648 IMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVP  683 (840)
Q Consensus       648 IVHRDLKPeNILLd~~~~~~~~~~~vKL~DFGlA~~  683 (840)
                      ++|+|+.+.|||+..+.. ......+.|+||-.|..
T Consensus       246 fcHnDl~~gNil~~~~~~-~~~~~~l~vIDwEya~~  280 (401)
T 3g15_A          246 FCHNDCQEGNILLLEGRE-NSEKQKLMLIDFEYSSY  280 (401)
T ss_dssp             EECSCCCGGGEEEETTGG-GCSSCCEEECCCTTCEE
T ss_pred             eEEecCCCCeEEEecCcc-cCcCCeEEEechHhccC
Confidence            679999999999965321 11235699999998864


No 284
>2f4m_A Peptide N-glycanase; glycoproteins, ubiquitin-dependent protein degradation, NUCL excision repair, peptide:N-glycanase; 1.85A {Mus musculus} SCOP: d.3.1.4 PDB: 2f4o_A*
Probab=80.07  E-value=0.23  Score=53.12  Aligned_cols=51  Identities=24%  Similarity=0.591  Sum_probs=42.9

Q ss_pred             eeeccccceeeeeeeccccCCCccccccccccccCCCCcceeEEeeCCceEEEEeccc
Q 003185          403 QFGVCRHRAVLLKYLCDRVEPPVPCELVRGYLDFQPHAWNTILVKKGDSWIRMIVDAC  460 (840)
Q Consensus       403 ~~g~~~~rallfk~l~d~~~~~lpcrlvrG~~~~~~~a~~s~lvr~G~~~~~~lvd~~  460 (840)
                      ..|+|++-|.||-.||=.++  ||+|+|.|+   ..|+|.++-+.....|+  .+|.+
T Consensus       139 r~G~C~d~A~lf~al~Ra~G--IpAR~V~Gy---~~HaW~Evy~~g~~gWv--~~Dpt  189 (295)
T 2f4m_A          139 RCGRCGEWANCFTLCCRALG--FEARYVWDY---TDHVWTEVYSPSQQRWL--HCDAC  189 (295)
T ss_dssp             CEESHHHHHHHHHHHHHHTT--CCEEEEEET---TTEEEEEEEETTTTEEE--EEETT
T ss_pred             CCEeeHHHHHHHHHHHHHCC--CCEEEEcCC---CCEEEEEEEECCCCeEE--EEeCC
Confidence            57999999999999999999  999999998   56999888886435663  55655


No 285
>3isr_A Transglutaminase-like enzymes, putative cysteine; protease, hutchinsoni MCSG, structural genomics; 1.90A {Cytophaga hutchinsonii}
Probab=76.19  E-value=0.29  Score=52.43  Aligned_cols=46  Identities=33%  Similarity=0.548  Sum_probs=39.6

Q ss_pred             eeeccccceeeeeeeccccCCCccccccccccc----cCCCCcceeEEeeCCce
Q 003185          403 QFGVCRHRAVLLKYLCDRVEPPVPCELVRGYLD----FQPHAWNTILVKKGDSW  452 (840)
Q Consensus       403 ~~g~~~~rallfk~l~d~~~~~lpcrlvrG~~~----~~~~a~~s~lvr~G~~~  452 (840)
                      ..|+|++-|.||-.||-.++  ||||+|.|+..    ...|+|+++-+. | .|
T Consensus       177 ~~G~C~d~A~l~val~Ra~G--IPAR~VsGy~~~~~~~~~HAW~Evyl~-g-gW  226 (293)
T 3isr_A          177 RAGVCRDFAHLGIALCRALS--IPARYFTGYAFKLNPPDFHACFEAYIG-G-NW  226 (293)
T ss_dssp             CEECHHHHHHHHHHHHHHTT--CCEEEEEEEETTCSSCCEEEEEEEEET-T-EE
T ss_pred             CcEehHHHHHHHHHHHHHCC--CCEEEEEEECCCCCCCCeEEEEEEEEC-C-cE
Confidence            47999999999999999999  99999999864    246999888875 3 57


No 286
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=70.29  E-value=0.36  Score=54.86  Aligned_cols=64  Identities=11%  Similarity=0.049  Sum_probs=19.1

Q ss_pred             eeeeeecccCceEEEEEEECC--eeEEE------EEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCcceeeeEEec
Q 003185          508 SSCDEAGKSVSSSLFRCKFGS--ADAAA------KVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKIS  579 (840)
Q Consensus       508 ~i~~~LG~G~fG~Vy~a~~~~--~~vAV------KI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~l~g~~~~  579 (840)
                      .+.+.||   ||.||++.+..  .+||+      |..  +......+...    .+.+|..+++.++|||+++.+++...
T Consensus       145 ~l~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~--~~~~~~~e~~~----~~~rea~l~~~~~H~niv~~h~f~~~  215 (463)
T 3cxl_A          145 PIYEHVG---YTTLNREPAYKKHMPVLKETHDERDST--GQDGVSEKRLT----SLVRRATLKENEQIPKYEKIHNFKVH  215 (463)
T ss_dssp             CSTTTSS---BCCC---------CCBGGGC-----------------------------------------CBCCCEEEE
T ss_pred             cccccCC---chhhhcccccccCCchhhhhccCcccc--ccccccccccc----cccccccccccccccccCCCcceEEe
Confidence            4456676   99999999854  46777      332  11112222222    34889999999999999999987764


Q ss_pred             C
Q 003185          580 S  580 (840)
Q Consensus       580 ~  580 (840)
                      .
T Consensus       216 ~  216 (463)
T 3cxl_A          216 T  216 (463)
T ss_dssp             C
T ss_pred             e
Confidence            4


No 287
>1x3z_A Peptide: N-glycanase; hydrolase-hydrolase inhibitor complex; HET: SUC; 2.80A {Saccharomyces cerevisiae} SCOP: d.3.1.4 PDB: 1x3w_A* 3esw_A*
Probab=54.23  E-value=1.7  Score=47.07  Aligned_cols=52  Identities=19%  Similarity=0.442  Sum_probs=42.9

Q ss_pred             eeeccccceeeeeeeccccCCCccccccccccccCCCCcceeEEeeCCceEEEEecccC
Q 003185          403 QFGVCRHRAVLLKYLCDRVEPPVPCELVRGYLDFQPHAWNTILVKKGDSWIRMIVDACR  461 (840)
Q Consensus       403 ~~g~~~~rallfk~l~d~~~~~lpcrlvrG~~~~~~~a~~s~lvr~G~~~~~~lvd~~~  461 (840)
                      .-|.|.|=|.||-.||=.++  +|+|+|-+.   .+|+|.++-......|  ..+|.+.
T Consensus       180 r~G~C~e~A~lF~~llRalG--i~aR~V~~~---~~H~W~EV~~~~~~rW--v~vDp~~  231 (335)
T 1x3z_A          180 RKGRCGEWCNLFTLILKSFG--LDVRYVWNR---EDHVWCEYFSNFLNRW--VHVDSCE  231 (335)
T ss_dssp             CEECHHHHHHHHHHHHHTTT--CCEEEEEET---TTEEEEEEEETTTTEE--EEEETTT
T ss_pred             CCcChHHHHHHHHHHHHHCC--CCeEEEecC---CCcEEEEEEECCCCCE--EEECCCC
Confidence            46999999999999999999  999999875   4599998888765667  3566553


No 288
>2q3z_A Transglutaminase 2; transglutaminase 2, tissue transglutaminase, TG2, transferas; 2.00A {Homo sapiens} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4 PDB: 1kv3_A 3ly6_A*
Probab=49.39  E-value=2.1  Score=50.71  Aligned_cols=31  Identities=23%  Similarity=0.408  Sum_probs=29.8

Q ss_pred             eeeeccccceeeeeeeccccCCCcccccccccc
Q 003185          402 VQFGVCRHRAVLLKYLCDRVEPPVPCELVRGYL  434 (840)
Q Consensus       402 l~~g~~~~rallfk~l~d~~~~~lpcrlvrG~~  434 (840)
                      ...|+|+|=|-+|-.+|=.++  ||+|+|.||.
T Consensus       272 ~k~G~C~dfA~~~~~llRalG--IPAR~VsGy~  302 (687)
T 2q3z_A          272 VKYGQCWVFAAVACTVLRCLG--IPTRVVTNYN  302 (687)
T ss_dssp             EEEECHHHHHHHHHHHHHHHT--CCEEEEEEEE
T ss_pred             cceeehHHHHHHHHHHHHhCC--CCcEEEeecc
Confidence            789999999999999999999  9999999986


No 289
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=38.35  E-value=42  Score=34.10  Aligned_cols=51  Identities=4%  Similarity=-0.067  Sum_probs=40.6

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCCCcEEEecccccCCCCCeEEEeecCCc
Q 003185          622 KHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRA  681 (840)
Q Consensus       622 ~~ls~~~~~~Ia~QIa~AL~yLHs~gIVHRDLKPeNILLd~~~~~~~~~~~vKL~DFGlA  681 (840)
                      ..++....++++.+|+....+++.+  +|--|.|+||+++.+       +.+++.-.|+-
T Consensus        76 k~~~~~eKlr~l~ni~~l~~~~~~r--~tf~L~P~NL~f~~~-------~~p~i~~RGik  126 (215)
T 4ann_A           76 KSFTKNEKLRYLLNIKNLEEVNRTR--YTFVLAPDELFFTRD-------GLPIAKTRGLQ  126 (215)
T ss_dssp             GGSCHHHHHHHHHHGGGGGGGGGSS--EECCCSGGGEEECTT-------SCEEESCCEET
T ss_pred             HhcCHHHHHHHHHHHHHHHHHhcCc--eEEEEecceEEEcCC-------CCEEEEEccCc
Confidence            3478899999999999888555544  777899999999988       56888877753


No 290
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=33.86  E-value=43  Score=34.10  Aligned_cols=50  Identities=6%  Similarity=-0.037  Sum_probs=39.3

Q ss_pred             CCCHHHHHHHHHHHHHHHH-HHHhCCeecccCCCCcEEEecccccCCCCCeEEEeecCCc
Q 003185          623 HVSVKLALFIAQDVAAALV-ELHSKHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRA  681 (840)
Q Consensus       623 ~ls~~~~~~Ia~QIa~AL~-yLHs~gIVHRDLKPeNILLd~~~~~~~~~~~vKL~DFGlA  681 (840)
                      .++....++++.+|+.... +++.  -+|--|.|+||+++.+       +.++|.-.|+-
T Consensus        81 ~~~~~eKlrll~nl~~L~~~~~~~--r~tf~l~P~NL~f~~~-------~~p~i~hRGi~  131 (219)
T 4ano_A           81 KTTLLSRIRAAIHLVSKVKHHSAR--RLIFIVCPENLMFNRA-------LEPFFLHVGVK  131 (219)
T ss_dssp             TSCHHHHHHHHHHHHHHHSSCCSS--SEECCCCGGGEEECTT-------CCEEESCCEET
T ss_pred             hcCHHHHHHHHHHHHHHHHHhhhC--ceeEEEeCceEEEeCC-------CcEEEEEcCCc
Confidence            3788899999999887766 5544  4777899999999987       45898877753


No 291
>1cja_A Protein (actin-fragmin kinase); transferase; HET: AMP; 2.90A {Physarum polycephalum} SCOP: d.144.1.3
Probab=32.15  E-value=1.7e+02  Score=31.77  Aligned_cols=158  Identities=13%  Similarity=0.053  Sum_probs=81.7

Q ss_pred             CCCCCCCCCC---ceeeeeecccCceEEEEEEECCeeEEEEEEecccCCCChHHHHHhHHhHHHHHHHHHhCCCCCccee
Q 003185          497 SGLDPGSFPS---LSSCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEM  573 (840)
Q Consensus       497 ~~~~p~~~~~---y~i~~~LG~G~fG~Vy~a~~~~~~vAVKI~~lk~~~~~~~~~~~f~~~~~rEi~iL~~L~HpNIV~l  573 (840)
                      +.++.+.|..   +..++..-.|..| ||.+..++..++||-  ..     ...    .+.+-.++...-.+.-|+.--+
T Consensus        58 ~~i~~i~w~~l~~v~~I~~s~~Gstg-vff~~td~~~~VVK~--s~-----~l~----~E~l~s~LA~~LGlpiP~~Riv  125 (342)
T 1cja_A           58 NDIGDINWKNLQQFKGIERSEKGTEG-LFFVETESGVFIVKR--ST-----NIE----SETFCSLLCMRLGLHAPKVRVV  125 (342)
T ss_dssp             SCTTCCCTTCGGGEEEEEECCSTTSC-EEEEEESSCEEEEEC--CT-----THH----HHHHHHHHHHHHTCCCCCEEEE
T ss_pred             CcccccccccccCeeEEEeccCCCCC-eEEEEeCCCEEEEeC--cH-----HHH----HHHHHHHHHHHhCCCCCCeeEE
Confidence            3456688887   7777777777755 555555667777773  21     112    2223556666666667764222


Q ss_pred             eeE----------EecCCCCCCCCCC--CccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHH--HHH
Q 003185          574 YGH----------KISSKWLPSADGN--PEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDV--AAA  639 (840)
Q Consensus       574 ~g~----------~~~~~~~p~~~g~--~~~~~~~~~LVmEy~~gGSL~~~L~~~~~~~~~~ls~~~~~~Ia~QI--a~A  639 (840)
                      .-.          .......    +.  ........+++|+|.+|..|.+.-...   -...+..+    .+.++  +-+
T Consensus       126 ~~~~~E~~e~~~~L~~~~~~----~~~l~~l~~~~~~l~meyv~G~~L~e~~~~~---~~~~f~~~----~~k~LG~Ii~  194 (342)
T 1cja_A          126 SSNSEEGTNMLECLAAIDKS----FRVITTLANQANILLMELVRGITLNKLTTTS---APEVLTKS----TMQQLGSLMA  194 (342)
T ss_dssp             ESSSHHHHHHHHHHHHHCSS----SCHHHHHTTCSEEEEEECCCEEESTTCCSSS---HHHHSCHH----HHHHHHHHHH
T ss_pred             eeCcHHHHHHHHHHHHhhhh----hHHHHHhhcccceehhhhcCCCccccchhhh---hhhhcCHH----HHHhhchhhe
Confidence            211          0000000    00  000111357999999876554321100   00112222    23333  345


Q ss_pred             HHHHHhCC----ee-cccCCCCcEEEecccccCCCCCeEEEeecCCccc
Q 003185          640 LVELHSKH----IM-HRDIKSENILIDLERKKADGKPVVKLCDFDRAVP  683 (840)
Q Consensus       640 L~yLHs~g----IV-HRDLKPeNILLd~~~~~~~~~~~vKL~DFGlA~~  683 (840)
                      +..+..++    .+ +.--.|.|||++.++      ..+.++|-+++..
T Consensus       195 FDi~InN~DR~Pl~W~n~GN~~NIL~~~~n------~~~~~IDhn~af~  237 (342)
T 1cja_A          195 LDVIVNNSDRLPIAWTNEGNLDNIMLSERG------ATVVPIDSKIIPL  237 (342)
T ss_dssp             HHHHHTCCSSSCSSSCSCCCGGGEEEESBT------TCEEECSCCCCCC
T ss_pred             ehhhhcCCccCcccccCCCChhheEEeCCC------CeEEEEcCCcccc
Confidence            66666552    22 223689999998762      3689999998843


No 292
>1vjj_A Protein-glutamine glutamyltransferase E; transglutaminase 3, X-RAY crystallography, metalloenzyme, calcium ION; HET: GDP; 1.90A {Homo sapiens} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4 PDB: 1sgx_A* 1l9m_A 1l9n_A* 1nud_A 1nuf_A 1nug_A 1rle_A*
Probab=24.78  E-value=8.1  Score=45.78  Aligned_cols=31  Identities=19%  Similarity=0.396  Sum_probs=29.3

Q ss_pred             eeeeccccceeeeeeeccccCCCcccccccccc
Q 003185          402 VQFGVCRHRAVLLKYLCDRVEPPVPCELVRGYL  434 (840)
Q Consensus       402 l~~g~~~~rallfk~l~d~~~~~lpcrlvrG~~  434 (840)
                      +++|+|+|=|-+|-.++=.++  ||+|+|+||.
T Consensus       267 V~~G~C~~fA~~~~~~lR~lG--IPaR~Vtgy~  297 (692)
T 1vjj_A          267 VRYGQCWVFAGTLNTALRSLG--IPSRVITNFN  297 (692)
T ss_dssp             EEEECHHHHHHHHHHHHHHHT--CCEEEEEEEE
T ss_pred             ccceeeHHHHHHHHHHHHhCC--CCeeEEcccc
Confidence            589999999999999999999  9999999994


No 293
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=23.60  E-value=6.7  Score=44.28  Aligned_cols=27  Identities=11%  Similarity=-0.105  Sum_probs=23.8

Q ss_pred             hHHHHHHHHHhCCCCCcceeeeEEecC
Q 003185          554 SCLGEVRMLGALRHSCIVEMYGHKISS  580 (840)
Q Consensus       554 ~~~rEi~iL~~L~HpNIV~l~g~~~~~  580 (840)
                      .|..|++++.+++|+|||+++|||...
T Consensus       325 eF~~Eve~L~~i~HrNLV~L~gyC~s~  351 (487)
T 3oja_A          325 TERLECERENQARQREIDALKEQYRTV  351 (487)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHTCCC
T ss_pred             HHHHHHHHHhcccccchhhHHHHhcCh
Confidence            459999999999999999999998643


No 294
>1g0d_A Protein-glutamine gamma-glutamyltransferase; tissue transglutaminase,acyltransferase; 2.50A {Pagrus major} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4
Probab=22.11  E-value=12  Score=44.42  Aligned_cols=32  Identities=16%  Similarity=0.345  Sum_probs=29.8

Q ss_pred             eeeeccccceeeeeeeccccCCCccccccccccc
Q 003185          402 VQFGVCRHRAVLLKYLCDRVEPPVPCELVRGYLD  435 (840)
Q Consensus       402 l~~g~~~~rallfk~l~d~~~~~lpcrlvrG~~~  435 (840)
                      +++|+|.|=|-+|-.++=.++  ||+|+|+||..
T Consensus       267 V~~G~C~~fA~v~~t~lR~lG--IPaR~Vtgy~s  298 (695)
T 1g0d_A          267 VKYGQCWVFAAVACTVLRCLG--IPTRPITNFAS  298 (695)
T ss_dssp             EEEECHHHHHHHHHHHHHHHT--CCEEEEEEEEE
T ss_pred             ccceeeHHHHHHHHHHHHhCC--CCeeEEccccc
Confidence            689999999999999999999  99999999854


Done!