Query 003188
Match_columns 840
No_of_seqs 262 out of 1461
Neff 5.5
Searched_HMMs 46136
Date Thu Mar 28 18:43:40 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/003188.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/003188hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2099 Glycogen phosphorylase 100.0 4E-260 8E-265 2107.1 54.9 818 9-839 5-834 (843)
2 TIGR02093 P_ylase glycogen/sta 100.0 1E-247 3E-252 2132.7 69.7 784 36-834 1-794 (794)
3 PRK14985 maltodextrin phosphor 100.0 8E-246 2E-250 2115.0 70.7 787 27-835 5-797 (798)
4 cd04300 GT1_Glycogen_Phosphory 100.0 1E-245 3E-250 2124.1 71.9 787 33-834 1-797 (797)
5 PRK14986 glycogen phosphorylas 100.0 5E-245 1E-249 2115.4 74.0 803 19-838 4-814 (815)
6 PF00343 Phosphorylase: Carboh 100.0 2E-224 3E-229 1922.3 50.1 705 116-836 1-713 (713)
7 COG0058 GlgP Glucan phosphoryl 100.0 9E-199 2E-203 1708.5 48.1 738 28-836 5-750 (750)
8 cd04299 GT1_Glycogen_Phosphory 100.0 1E-134 3E-139 1196.6 48.0 574 84-832 85-688 (778)
9 TIGR02094 more_P_ylases alpha- 100.0 1E-133 3E-138 1169.7 47.3 571 87-832 1-599 (601)
10 COG0297 GlgA Glycogen synthase 100.0 9.7E-48 2.1E-52 437.3 19.8 383 259-829 83-473 (487)
11 PLN02939 transferase, transfer 100.0 5.8E-44 1.3E-48 425.6 33.1 502 51-829 449-962 (977)
12 PRK14098 glycogen synthase; Pr 100.0 3.4E-42 7.3E-47 395.8 29.0 451 134-829 17-481 (489)
13 PRK14099 glycogen synthase; Pr 100.0 1.1E-39 2.4E-44 374.7 28.5 393 246-830 70-475 (485)
14 TIGR02095 glgA glycogen/starch 100.0 4.8E-38 1E-42 358.4 29.1 451 134-830 12-469 (473)
15 cd03791 GT1_Glycogen_synthase_ 100.0 1E-37 2.2E-42 354.2 29.1 462 131-831 8-474 (476)
16 PRK00654 glgA glycogen synthas 100.0 1.2E-37 2.6E-42 355.3 27.5 442 134-830 12-459 (466)
17 PLN02316 synthase/transferase 100.0 1.1E-35 2.3E-40 360.2 29.7 422 137-830 602-1030(1036)
18 PF08323 Glyco_transf_5: Starc 99.8 1.6E-20 3.4E-25 198.6 5.8 226 136-476 13-242 (245)
19 cd03793 GT1_Glycogen_synthase_ 99.6 4.4E-14 9.5E-19 163.8 22.7 209 440-700 216-507 (590)
20 TIGR02470 sucr_synth sucrose s 99.6 3.5E-14 7.6E-19 170.4 21.0 194 554-830 540-744 (784)
21 PLN00142 sucrose synthase 99.5 9.3E-13 2E-17 158.5 21.8 194 555-831 564-768 (815)
22 TIGR02468 sucrsPsyn_pln sucros 99.4 8.2E-12 1.8E-16 153.2 18.8 274 441-834 372-671 (1050)
23 TIGR02149 glgA_Coryne glycogen 99.4 2.6E-11 5.6E-16 133.4 20.7 242 445-829 139-382 (388)
24 TIGR02472 sucr_P_syn_N sucrose 99.4 7.2E-11 1.6E-15 134.5 23.4 254 443-831 177-438 (439)
25 TIGR03449 mycothiol_MshA UDP-N 99.3 6.1E-10 1.3E-14 124.0 23.1 240 447-832 160-400 (405)
26 cd03813 GT1_like_3 This family 99.2 2.4E-09 5.1E-14 123.5 21.6 235 442-829 236-472 (475)
27 cd03796 GT1_PIG-A_like This fa 99.1 6E-09 1.3E-13 116.7 19.3 119 562-707 191-309 (398)
28 cd03800 GT1_Sucrose_synthase T 98.9 5.3E-08 1.1E-12 106.7 20.4 237 447-828 160-397 (398)
29 cd03805 GT1_ALG2_like This fam 98.9 5.3E-08 1.1E-12 107.4 19.5 131 561-706 208-338 (392)
30 PRK15490 Vi polysaccharide bio 98.9 1.3E-07 2.8E-12 110.5 23.5 126 562-718 396-521 (578)
31 cd04962 GT1_like_5 This family 98.9 7.1E-08 1.5E-12 105.0 19.8 114 561-704 194-307 (371)
32 cd03809 GT1_mtfB_like This fam 98.9 4.5E-08 9.7E-13 104.7 16.2 115 562-702 193-307 (365)
33 PLN02871 UDP-sulfoquinovose:DA 98.9 1E-07 2.2E-12 109.5 20.0 169 449-708 204-372 (465)
34 cd03819 GT1_WavL_like This fam 98.8 2E-07 4.4E-12 100.5 19.3 181 450-708 124-305 (355)
35 PRK15427 colanic acid biosynth 98.8 1.4E-07 2.9E-12 107.1 18.4 177 564-832 222-404 (406)
36 cd03788 GT1_TPS Trehalose-6-Ph 98.8 1.3E-07 2.8E-12 109.2 16.9 123 562-693 262-386 (460)
37 cd03807 GT1_WbnK_like This fam 98.8 4.7E-07 1E-11 95.7 19.4 123 555-707 186-308 (365)
38 cd03822 GT1_ecORF704_like This 98.8 5.1E-07 1.1E-11 96.6 19.6 178 562-830 183-364 (366)
39 cd05844 GT1_like_7 Glycosyltra 98.7 5.4E-07 1.2E-11 98.0 18.5 118 564-706 188-309 (367)
40 cd03792 GT1_Trehalose_phosphor 98.7 3.2E-07 6.9E-12 101.6 16.8 124 555-702 183-308 (372)
41 PRK10307 putative glycosyl tra 98.7 1.8E-06 3.8E-11 97.1 22.2 172 445-701 166-341 (412)
42 cd04951 GT1_WbdM_like This fam 98.7 1.3E-06 2.8E-11 94.1 19.6 121 555-706 181-301 (360)
43 PRK15179 Vi polysaccharide bio 98.6 2.2E-06 4.8E-11 103.5 22.4 127 561-718 514-640 (694)
44 cd03795 GT1_like_4 This family 98.6 1.7E-06 3.6E-11 93.1 19.3 126 562-717 189-314 (357)
45 cd03818 GT1_ExpC_like This fam 98.6 6.2E-07 1.3E-11 100.4 14.7 183 445-706 151-339 (396)
46 cd03825 GT1_wcfI_like This fam 98.6 2.8E-06 6.1E-11 91.7 18.6 167 449-706 134-303 (365)
47 PHA01633 putative glycosyl tra 98.6 7.6E-07 1.7E-11 99.0 14.5 185 562-828 146-334 (335)
48 TIGR03088 stp2 sugar transfera 98.6 1.4E-06 3.1E-11 96.0 16.5 121 562-707 192-312 (374)
49 cd03821 GT1_Bme6_like This fam 98.6 1E-06 2.2E-11 93.6 14.4 122 561-707 200-321 (375)
50 PF05693 Glycogen_syn: Glycoge 98.5 2.7E-06 5.9E-11 99.6 18.7 285 302-697 120-499 (633)
51 TIGR02400 trehalose_OtsA alpha 98.5 2.3E-05 4.9E-10 90.8 24.8 130 563-701 258-394 (456)
52 cd03801 GT1_YqgM_like This fam 98.5 1.8E-05 3.8E-10 83.0 21.3 120 561-707 196-315 (374)
53 cd03798 GT1_wlbH_like This fam 98.5 1.2E-05 2.6E-10 84.8 20.1 171 449-706 147-317 (377)
54 PRK15484 lipopolysaccharide 1, 98.5 3.3E-06 7.2E-11 94.7 16.4 137 555-716 186-324 (380)
55 cd03812 GT1_CapH_like This fam 98.4 3.4E-06 7.4E-11 91.1 14.3 119 561-708 189-307 (358)
56 cd03816 GT1_ALG1_like This fam 98.3 5.1E-05 1.1E-09 86.3 21.3 135 562-718 230-366 (415)
57 cd03808 GT1_cap1E_like This fa 98.3 5.8E-06 1.3E-10 87.0 12.3 118 561-706 185-302 (359)
58 PLN02949 transferase, transfer 98.1 3.9E-05 8.5E-10 89.0 15.0 120 563-700 267-387 (463)
59 cd04949 GT1_gtfA_like This fam 98.1 1.1E-05 2.4E-10 88.8 9.9 168 564-827 204-372 (372)
60 TIGR02918 accessory Sec system 98.1 4.2E-05 9.2E-10 89.6 15.1 122 565-718 320-442 (500)
61 cd03799 GT1_amsK_like This is 98.0 3.3E-05 7.1E-10 83.1 11.6 120 562-706 177-300 (355)
62 PF00534 Glycos_transf_1: Glyc 98.0 3.3E-05 7.2E-10 75.7 10.6 130 560-717 11-140 (172)
63 cd03817 GT1_UGDG_like This fam 98.0 5.6E-05 1.2E-09 80.5 12.9 129 561-718 199-327 (374)
64 cd03820 GT1_amsD_like This fam 98.0 4.5E-05 9.7E-10 79.9 12.0 111 562-701 176-286 (348)
65 cd01635 Glycosyltransferase_GT 98.0 1.5E-05 3.2E-10 79.4 7.0 120 569-717 109-229 (229)
66 PLN03063 alpha,alpha-trehalose 98.0 0.00035 7.6E-09 86.2 19.9 130 563-701 278-414 (797)
67 PRK14501 putative bifunctional 97.9 0.00075 1.6E-08 82.6 22.3 128 563-702 264-401 (726)
68 cd04955 GT1_like_6 This family 97.9 7.4E-05 1.6E-09 80.8 12.1 111 565-704 194-305 (363)
69 cd03794 GT1_wbuB_like This fam 97.9 0.00016 3.4E-09 77.1 13.6 117 561-706 217-338 (394)
70 PRK10125 putative glycosyl tra 97.9 0.00057 1.2E-08 78.0 18.2 113 562-718 239-354 (405)
71 cd03814 GT1_like_2 This family 97.9 0.00023 5E-09 76.0 14.1 169 562-831 195-363 (364)
72 PHA01630 putative group 1 glyc 97.8 0.00011 2.4E-09 81.6 11.9 118 564-719 142-259 (331)
73 cd03823 GT1_ExpE7_like This fa 97.8 0.00078 1.7E-08 71.6 16.2 114 562-706 189-302 (359)
74 cd03802 GT1_AviGT4_like This f 97.7 0.00023 5E-09 76.2 11.8 123 564-718 171-293 (335)
75 cd03806 GT1_ALG11_like This fa 97.7 0.00033 7.2E-09 80.0 12.7 139 563-717 236-376 (419)
76 cd04946 GT1_AmsK_like This fam 97.6 0.00097 2.1E-08 75.7 15.2 128 563-717 229-358 (407)
77 cd03811 GT1_WabH_like This fam 97.5 0.00027 5.8E-09 74.1 8.6 127 561-718 186-312 (353)
78 cd03804 GT1_wbaZ_like This fam 97.5 0.00041 9E-09 75.8 10.1 104 565-706 196-299 (351)
79 TIGR02398 gluc_glyc_Psyn gluco 97.4 0.016 3.5E-07 68.0 21.7 137 552-702 278-421 (487)
80 PLN02846 digalactosyldiacylgly 97.4 0.0016 3.4E-08 75.8 12.7 119 565-717 229-347 (462)
81 TIGR03087 stp1 sugar transfera 97.3 0.0021 4.6E-08 72.2 12.1 162 447-700 169-331 (397)
82 KOG1111 N-acetylglucosaminyltr 96.8 0.013 2.7E-07 65.5 12.6 113 562-701 193-305 (426)
83 PRK09922 UDP-D-galactose:(gluc 96.4 0.015 3.2E-07 64.6 9.7 122 564-717 180-306 (359)
84 PLN02275 transferase, transfer 96.3 0.022 4.8E-07 63.9 11.0 136 565-718 214-358 (371)
85 PLN02501 digalactosyldiacylgly 96.2 0.012 2.5E-07 71.2 7.9 127 555-717 539-665 (794)
86 PLN03064 alpha,alpha-trehalose 95.9 1 2.3E-05 56.9 23.2 126 564-702 363-499 (934)
87 COG0438 RfaG Glycosyltransfera 95.7 0.25 5.5E-06 50.7 14.5 117 564-707 199-316 (381)
88 PF11897 DUF3417: Protein of u 95.5 0.0077 1.7E-07 57.8 2.1 42 56-100 75-118 (118)
89 KOG0853 Glycosyltransferase [C 95.1 0.12 2.6E-06 60.5 10.6 133 561-706 270-404 (495)
90 KOG3742 Glycogen synthase [Car 93.8 0.076 1.6E-06 60.7 4.9 110 440-595 242-355 (692)
91 PF13692 Glyco_trans_1_4: Glyc 93.5 0.17 3.7E-06 47.5 6.1 102 563-699 1-103 (135)
92 cd04950 GT1_like_1 Glycosyltra 92.9 0.76 1.7E-05 51.6 11.2 102 563-697 204-308 (373)
93 COG0380 OtsA Trehalose-6-phosp 90.4 9.4 0.0002 45.2 16.7 131 564-705 282-421 (486)
94 TIGR03713 acc_sec_asp1 accesso 90.1 3.6 7.7E-05 49.1 13.4 177 562-827 319-515 (519)
95 PF00982 Glyco_transf_20: Glyc 89.5 13 0.00028 44.0 17.2 127 564-702 276-412 (474)
96 PRK10117 trehalose-6-phosphate 89.0 24 0.00053 41.8 18.7 129 564-702 255-392 (474)
97 PRK05749 3-deoxy-D-manno-octul 86.8 10 0.00023 43.1 13.9 117 563-698 232-351 (425)
98 PRK13609 diacylglycerol glucos 84.6 13 0.00028 41.5 13.1 44 647-698 257-300 (380)
99 PLN02205 alpha,alpha-trehalose 83.9 45 0.00097 42.5 18.5 133 562-702 337-490 (854)
100 PRK00726 murG undecaprenyldiph 83.6 23 0.00049 39.2 14.3 100 561-699 180-280 (357)
101 PRK13608 diacylglycerol glucos 73.9 30 0.00065 39.4 11.7 43 647-697 257-299 (391)
102 TIGR01133 murG undecaprenyldip 73.6 49 0.0011 36.0 13.0 102 561-699 176-278 (348)
103 PF13579 Glyco_trans_4_4: Glyc 70.0 2.7 5.9E-05 39.4 1.9 37 331-382 72-108 (160)
104 TIGR00236 wecB UDP-N-acetylglu 69.8 37 0.0008 37.8 11.1 110 565-707 199-310 (365)
105 PLN02605 monogalactosyldiacylg 67.7 75 0.0016 35.9 13.1 111 554-698 198-309 (382)
106 cd03785 GT1_MurG MurG is an N- 60.2 1.4E+02 0.003 32.6 13.1 46 647-700 236-281 (350)
107 PF13439 Glyco_transf_4: Glyco 53.4 27 0.00058 33.2 5.5 40 448-493 137-176 (177)
108 TIGR00215 lpxB lipid-A-disacch 46.1 90 0.002 35.6 9.1 114 554-704 183-299 (385)
109 PRK00025 lpxB lipid-A-disaccha 43.2 1E+02 0.0022 34.2 8.9 109 554-699 178-288 (380)
110 cd01635 Glycosyltransferase_GT 34.3 70 0.0015 31.4 5.2 46 331-390 50-95 (229)
111 PF13477 Glyco_trans_4_2: Glyc 33.7 49 0.0011 31.1 3.8 36 331-380 73-109 (139)
112 PF13524 Glyco_trans_1_2: Glyc 32.7 1.1E+02 0.0023 27.0 5.6 75 744-828 14-91 (92)
113 cd03786 GT1_UDP-GlcNAc_2-Epime 32.4 2.1E+02 0.0046 31.3 9.1 109 555-698 192-303 (363)
114 TIGR02919 accessory Sec system 31.3 1.1E+02 0.0024 36.0 6.8 49 647-697 329-377 (438)
115 PF14407 Frankia_peptide: Ribo 28.1 16 0.00035 31.4 -0.5 42 92-133 2-43 (61)
116 PF00814 Peptidase_M22: Glycop 22.9 44 0.00096 36.4 1.5 54 109-164 33-89 (268)
117 KOG2387 CTP synthase (UTP-ammo 22.4 1.4E+03 0.03 27.5 14.0 187 487-711 208-415 (585)
118 KOG1387 Glycosyltransferase [C 21.7 1E+03 0.022 27.8 11.6 85 603-697 302-386 (465)
119 TIGR02672 cas_csm6 CRISPR-asso 20.7 49 0.0011 37.7 1.3 33 663-701 41-83 (362)
120 PF09659 Cas_Csm6: CRISPR-asso 20.5 46 0.00099 38.4 1.1 21 663-689 38-58 (382)
No 1
>KOG2099 consensus Glycogen phosphorylase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=3.9e-260 Score=2107.14 Aligned_cols=818 Identities=53% Similarity=0.890 Sum_probs=791.8
Q ss_pred cchhhhhcccccccCCCCCCHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCceEE
Q 003188 9 KNEAAKLAKIPAAANPLANEPSAIASNISYHVQYSPHFSPTKFEPEQAFFATAESVRDRLIQQWNETYHHFNKVDPKQTY 88 (840)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~at~~~~y~ala~~vrd~l~~~w~~t~~~~~~~~~k~vy 88 (840)
-.+.++|+||++++.+...++.+++++|.+|+++++.+++..|++.+.|.|+|.+|||.|+.+|++|+|+|.+.++||||
T Consensus 5 ~~~~~~r~qis~r~~~~~~~~~e~~~~f~~H~~ftl~k~~~~~~~~~~yfA~a~tvRD~Lv~~W~rTqqhy~~~dpKrvY 84 (843)
T KOG2099|consen 5 LIDSEKRKQISVRGIAGVEDVAEVKKSFNRHLHFTLVKDRNVATPRDYYFALAHTVRDHLVGRWIRTQQHYYEKDPKRVY 84 (843)
T ss_pred ccccchhhhcchhcccCCccHHHHHHHHHhheeeeeecCcccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceee
Confidence 45788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEehhccccchhHHhhccChHHHHHHHHHhcCCChHHHHhhccccCCCCCCcccchhhhHhhhhccCCCeEEEeeccCC
Q 003188 89 YLSMEFLQGRTLTNAIGSLDIQNAYADALNNLGHVLEEIAEQEKDAALGNGGLGRLASCFLDSMATLNLPAWGYGLRYRY 168 (840)
Q Consensus 89 YlSmEfl~Gr~L~nnl~NLg~~~~~~eaL~~lg~~~~~l~~~E~d~~LgnGGLGrLAac~ldS~a~l~~p~~G~GlrY~~ 168 (840)
||||||+|||+|+|.++||||.+.+.+||.+||+|+|+|+|+|+||||||||||||||||||||||||+|++||||||+|
T Consensus 85 YLSlEf~mGRaL~Ntm~Nlglq~~~deAl~qlG~dlEel~e~E~DagLGNGGLGRLAaCFlDSMATlglpA~GYGlRYey 164 (843)
T KOG2099|consen 85 YLSLEFYMGRALQNTMINLGLQNACDEALYQLGLDLEELEEQEEDAGLGNGGLGRLAACFLDSMATLGLPAYGYGLRYEY 164 (843)
T ss_pred EeehHHhhhhHHHHHHHhccCcchhHHHHHHhCcCHHHHHhcCcCcCcCCcchHHHHHHHHHHHhhcCCccccccceeeh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccceEEeeCCceeeccccccccCCCcccccCCeeEEEEECCeEEEcCCCceeeeCCeEEEEEEeeeccCCCCCCceEEEE
Q 003188 169 GLFKQKITKQGQEEVAEDWLEKFSPWEVVRHDVVFPVRFFGSVMVNPNGTRKWVGGEVVQAVAYDIPIPGYKTKNTISLR 248 (840)
Q Consensus 169 G~F~Q~i~dG~Q~E~pd~Wl~~~~pwe~~r~~~~~~V~f~g~~~~~~~g~~~w~~~~~v~av~yd~pi~gy~~~~~~~lr 248 (840)
|+|+|+|.+|||+|.||+||+.|||||+.|+++.+||+|||+|+...+| .+|++++.|.|+|||+|||||+|++||+||
T Consensus 165 GiF~QkI~~g~Q~E~~ddWL~~gnPWE~~R~e~~lPV~FyGkV~~~~~g-~kWid~q~V~A~~YD~PvPGyk~n~vntlR 243 (843)
T KOG2099|consen 165 GIFKQKITDGWQVEEPDDWLRYGNPWEKARPEVMLPVHFYGKVEHTPDG-SKWIDTQVVLAMPYDTPVPGYKNNTVNTLR 243 (843)
T ss_pred hhHHHHhcCCccccchHHHHHcCCchhhcCcceEeEEEEEEEEEeCCCc-ceeecceeEEEeccCCCCCCcccCcceeee
Confidence 9999999999999999999999999999999999999999999987777 579999999999999999999999999999
Q ss_pred EEEEEcCCCCccccccCcchhhhhHhhhhhhccccccccCCCCchhhhhhhhhhhhHHHHhHHHHHHHHHHHccc-C---
Q 003188 249 LWDAKASAEDFNLFQFNDGQYESAAQLHSRAQQICAVLYPGDSTEEGKLLRLKQQFFLCSASLQDMILRFKERKS-G--- 324 (840)
Q Consensus 249 Lw~a~v~~~~~~l~~~~~~~y~~a~~~~~~~~~It~~LYp~D~~~~Gk~lRL~Qeyfl~~a~lqdiir~~~~~~g-~--- 324 (840)
||+|+ ++++|+|..||.|+|.+|+..++.+|+||.+|||+|+..+||+||||||||+|+|+||||||||+...+ +
T Consensus 244 LWsak-a~~df~l~~fN~Gdy~~av~~~~~AenI~~VLYPnDnf~eGKeLRLKQqyf~caAtLqDIirRFk~sk~~~r~~ 322 (843)
T KOG2099|consen 244 LWSAK-APNDFDLKDFNVGDYIQAVLDRNLAENISRVLYPNDNFFEGKELRLKQQYFLCAATLQDIIRRFKSSKFGCREP 322 (843)
T ss_pred eeccC-CCCCCCHHhccCchHHHHHHHHHhhhhceEEecCCCccccchhhhhhhhhhhhHHHHHHHHHHHhhcccCcccc
Confidence 99999 778999999999999999999999999999999999999999999999999999999999999986442 1
Q ss_pred --cccccCCCceEEEeCCCcccccHHHHHHHHHhhcCCChhHHhhhcCccEEEeecCChhhhHhhccHHHHHhhchhHHH
Q 003188 325 --RQWSEFPSKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEALEKWSQAVMWKLLPRHME 402 (840)
Q Consensus 325 --~~l~~l~~~~viHlNDtHpalaipElmR~l~d~~~l~~~~A~~i~~~~~vfT~HT~~~eglE~w~~~l~~~lLPr~~~ 402 (840)
..|++||++++||+|||||+|+||||||+|||.+||+|++||+||.+||+|||||++|||+|+||++||+++||||+|
T Consensus 323 ~~~~~~~FPdkVAiQlNDTHPtLaIpELmRiLvD~e~l~W~~AWdit~kT~AYTNHTVlpEALErWp~~L~e~LLPRHle 402 (843)
T KOG2099|consen 323 VRTNFEEFPDKVAIQLNDTHPTLAIPELMRILVDLEGLDWDKAWDITQKTCAYTNHTVLPEALERWPVSLMEKLLPRHLE 402 (843)
T ss_pred cccchhhCcHhheeeccCCCccccHHHHHHHHHhcccCCHHHHHHHhhhheeeccccccHHHHHHhhHHHHHHhhhHHHH
Confidence 239999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCCcccccccccccCCCCCCcccccccccccCCcccchhhhhHHHHHhhhhcCccccCCCCCc
Q 003188 403 IIEEIDKRFIAMVRSTRSDLESKIPSMCILDNNPKKPVVRMANLCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQ 482 (840)
Q Consensus 403 ii~~in~~f~~~~~~~~~~~~~~~~~~~iie~~~~~~~v~Ma~lai~~S~~VNgVS~lH~eilk~~~f~~~~~l~p~k~~ 482 (840)
|||+||.+|++.+.++||.|.|++++|||+|++++..+||||+|||++||+||||+++|++++|+.+|+||+++||+||.
T Consensus 403 IIy~In~~~l~~i~~~fp~D~drlrrmsiiee~~~~k~i~MA~L~ivgsHaVNGVa~iHSeilK~~~F~Df~e~~P~KFq 482 (843)
T KOG2099|consen 403 IIYEINQRFLQTVAAKFPGDVDRLRRMSIIEENSPEKRINMAHLCIVGSHAVNGVAEIHSEILKQSVFKDFYELEPEKFQ 482 (843)
T ss_pred HHHHHHHHHHHHHHHHCCCcHHHHhhhhhhhcCCccceeeeeeeeeecccccccHHHHHHHHHHHHHHHHHHHhChHHhc
Confidence 99999999999999999999999999999998311129999999999999999999999999999999999999999999
Q ss_pred ccccccCcccccccCChhhhHHHHhhcCccccccChhhHhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCC
Q 003188 483 NKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLLVGLRQFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDP 562 (840)
Q Consensus 483 ~iTNGI~~rrWl~~~NP~l~~li~~~~g~~~w~~~~~~l~~l~~~~~d~~~~~~~~~~K~~nK~~L~~~i~~~~G~~~dp 562 (840)
|+||||||||||..|||.|+++|++.|| ++|++|+++|.+|+++++|++|+++|+++|++||.+|++||++++|+.++|
T Consensus 483 NkTNGITPRRWL~~cnP~LadlI~e~ig-e~~i~dl~~l~~L~~~a~d~~f~~~~a~vK~~NKlk~a~~le~e~~v~inp 561 (843)
T KOG2099|consen 483 NKTNGITPRRWLLLCNPGLADLITEKIG-EEWITDLDQLTKLRKFADDEEFQREWAKVKQENKLKLAAYLEKEYGVKINP 561 (843)
T ss_pred cccCCcCHHHHHHhcCchHHHHHHHHhh-hHhhhhHHHHHHHHHhcccHHHHHHHHHHHHhhHHHHHHHHHHHhCcccCc
Confidence 9999999999999999999999999999 699999999999999999999999999999999999999999999999999
Q ss_pred CCceEeecccchhhhhhhhhhhHHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcCC
Q 003188 563 NSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEV 642 (840)
Q Consensus 563 ~~l~d~~vkR~heYKRq~Lnll~ii~~y~~ik~~~p~~~~~~~p~~~If~GKA~P~y~~aK~iIk~I~~la~~in~d~~~ 642 (840)
+++||+||||+||||||+||+||++++|.+||+ +|.. .++|+++||||||+|+|++||.|||+|+++|++||+||.+
T Consensus 562 ~smFDiqVKRIHEYKRQllN~l~vi~~y~riK~-e~~k--~fvprtvm~GGKaapgY~mAK~Iiklit~V~dvVN~Dp~v 638 (843)
T KOG2099|consen 562 SSMFDIQVKRIHEYKRQLLNCLHVIYLYNRIKE-EPAK--AFVPRTVMIGGKAAPGYHMAKLIIKLITAVADVVNNDPEV 638 (843)
T ss_pred chhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhh-hhhh--ccCceEEEEcCccCchhHHHHHHHHHHHHHHHHhcCChhh
Confidence 999999999999999999999999999999998 7763 6789999999999999999999999999999999999999
Q ss_pred CCcceEEEEcCCCHHHHhhhccCccccccCCCCCccCCCcchhHHhhcCceEeeecCchhHHHHHHhcCcceEeecCccc
Q 003188 643 NSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAVAE 722 (840)
Q Consensus 643 ~~~lkVvFl~nYnvslA~~ii~gaDv~l~iS~a~~EAsGTs~MKam~NGal~i~tlDGanvEi~~~vG~~N~~~fG~~~d 722 (840)
.++|||+|+|||+||+||+||||||+|+||||||+||||||||||||||+|+|||||||||||+|++|+||+||||+++|
T Consensus 639 gd~LKViFl~nY~Vs~AE~iIPasdLSe~ISTAGtEASGT~NMKF~lNG~l~IGTlDGANVEm~eE~GeeN~FiFG~~~e 718 (843)
T KOG2099|consen 639 GDRLKVIFLENYRVSLAEKIIPASDLSEQISTAGTEASGTGNMKFMLNGALTIGTLDGANVEMAEEAGEENFFIFGMRVE 718 (843)
T ss_pred hheeEEEEecCcccchhhhccchHHHHHHhhhccccccCCCcceEEecCeEEEecccccchHHHHHcCcccEEEecccHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cchhhhhhccCCC---CCCChhHHHHHHHHhcCCCCCCC---hHHHHHHHhhCCCCCCCccccccCChHHHHHHHHHHHH
Q 003188 723 QVPKLRKEREDGL---FKPDPRFEEAKQFIRSGAFGSYD---YNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQ 796 (840)
Q Consensus 723 ~V~~~~~~~~y~~---~~~~~~l~~v~~~~~~G~f~~~~---~~~l~~~L~~~~~~~~~D~~~~~~Df~~y~~~~~~~~~ 796 (840)
+|..++++| |+. +..+|+++.|++++.+|+|++.+ |.++.+.+.. .|+|+|++||+||++||++|++
T Consensus 719 ~V~~L~k~g-y~a~~~~~~~P~l~~v~~~i~sG~Fsp~~pd~fkd~~~~l~~------hD~f~V~~Df~sYi~~q~kVd~ 791 (843)
T KOG2099|consen 719 DVEALRKKG-YNAQEYYDPLPELKQVIDQIESGFFSPKNPDEFKDIVNMLMY------HDYFLVFADFEAYIKCQEKVDQ 791 (843)
T ss_pred HHHHHHhhc-ccccccCCCCchHHHHHHHHhcCccCCCCchHHHHHHHhhhc------cceEEeeCcHHHHHHHHHHHHH
Confidence 999999887 765 46789999999999999999888 7777777774 3999999999999999999999
Q ss_pred HhcCHHHHHHHHHHHhccCCCCChHHHHHHHHHHHhccccccC
Q 003188 797 AYKDQKKWLKMSILSTAGSGKFSSDRTIAQYAKEIWNITECRT 839 (840)
Q Consensus 797 ~Y~d~~~W~~~~~~n~a~~g~FSsDrti~eYa~~iw~~~~~~~ 839 (840)
+|+|+++|.+|++.|+|.+|+|||||||.|||++||+|+|+..
T Consensus 792 ~y~nqk~W~~msi~niA~sgkFSSDRtI~eYa~eIWnvep~~~ 834 (843)
T KOG2099|consen 792 LYRNQKEWLKMSILNIAGSGKFSSDRTIAEYAREIWNVEPSEL 834 (843)
T ss_pred HHhCHHHHHHHHHHhhhcccccCccchHHHHHHHhcCCCcccC
Confidence 9999999999999999999999999999999999999999864
No 2
>TIGR02093 P_ylase glycogen/starch/alpha-glucan phosphorylases. This family consists of phosphorylases. Members use phosphate to break alpha 1,4 linkages between pairs of glucose residues at the end of long glucose polymers, releasing alpha-D-glucose 1-phosphate. The nomenclature convention is to preface the name according to the natural substrate, as in glycogen phosphorylase, starch phosphorylase, maltodextrin phosphorylase, etc. Name differences among these substrates reflect differences in patterns of branching with alpha 1,6 linkages. Members include allosterically regulated and unregulated forms. A related family, TIGR02094, contains examples known to act well on particularly small alpha 1,4 glucans, as may be found after import from exogenous sources.
Probab=100.00 E-value=1.4e-247 Score=2132.73 Aligned_cols=784 Identities=55% Similarity=0.921 Sum_probs=763.4
Q ss_pred HHHHHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCceEEEEEehhccccchhHHhhccChHHHHHH
Q 003188 36 ISYHVQYSPHFSPTKFEPEQAFFATAESVRDRLIQQWNETYHHFNKVDPKQTYYLSMEFLQGRTLTNAIGSLDIQNAYAD 115 (840)
Q Consensus 36 ~~~~l~~~~g~~~~~at~~~~y~ala~~vrd~l~~~w~~t~~~~~~~~~k~vyYlSmEfl~Gr~L~nnl~NLg~~~~~~e 115 (840)
|.+||++++|+++++||+.++|+|||.+|||+++++|.+|++.+.+.+.|+||||||||||||+|.|||+|||+++++++
T Consensus 1 ~~~~l~~~~~~~~~~a~~~~~y~ala~~vrd~l~~~w~~t~~~~~~~~~k~vyYlS~EfL~Gr~l~nnl~nlgl~~~~~~ 80 (794)
T TIGR02093 1 ILYHLEYTYGKTIDDATPRDLYTALAKAVRDRLVDRWLETQEKYRDNNQKQVYYLSAEFLMGRLLGNNLLNLGLYDEVKE 80 (794)
T ss_pred CHHHHHHHhCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEEEehhhhcchHHHHHHHhCCCHHHHHH
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCCChHHHHhhccccCCCCCCcccchhhhHhhhhccCCCeEEEeeccCCccceEEeeCCceeeccccccccCCCcc
Q 003188 116 ALNNLGHVLEEIAEQEKDAALGNGGLGRLASCFLDSMATLNLPAWGYGLRYRYGLFKQKITKQGQEEVAEDWLEKFSPWE 195 (840)
Q Consensus 116 aL~~lg~~~~~l~~~E~d~~LgnGGLGrLAac~ldS~a~l~~p~~G~GlrY~~G~F~Q~i~dG~Q~E~pd~Wl~~~~pwe 195 (840)
||++||+|+++|+++|+||||||||||||||||||||||||+|++||||||+||||+|+|.||||+|.||+|+..++|||
T Consensus 81 ~l~~lg~~l~~i~~~E~Da~LGnGGLGrLAacfldS~Atl~~P~~GyGirY~yG~F~Q~I~dG~Q~E~pd~Wl~~~~pwe 160 (794)
T TIGR02093 81 ALRELGLDLEEILEIENDAGLGNGGLGRLAACFLDSLATLGLPATGYGIRYEYGLFKQKIVDGWQVELPDDWLRYGNPWE 160 (794)
T ss_pred HHHHhCCCHHHHHhcCCCCCCCCCchHHHHHHHHHHHHhCCCCeEEEEeeecCCceEEEEECCEEEEcCCCcCCCCCCce
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCeeEEEEECCeEEEcCC-Ccee--eeCCeEEEEEEeeeccCCCCCCceEEEEEEEEEcCCCCccccccCcchhhhh
Q 003188 196 VVRHDVVFPVRFFGSVMVNPN-GTRK--WVGGEVVQAVAYDIPIPGYKTKNTISLRLWDAKASAEDFNLFQFNDGQYESA 272 (840)
Q Consensus 196 ~~r~~~~~~V~f~g~~~~~~~-g~~~--w~~~~~v~av~yd~pi~gy~~~~~~~lrLw~a~v~~~~~~l~~~~~~~y~~a 272 (840)
++|++.+|+|+|+|+|+...+ |+.+ |++.+.|+|||||+|||||++++||+||||+++ +.+.|++..||.|+|.+|
T Consensus 161 ~~r~~~~~~V~f~G~v~~~~~~g~~~~~w~~~~~v~avpyD~pi~Gy~~~~vn~LRLW~a~-~~~~f~l~~fn~gdy~~a 239 (794)
T TIGR02093 161 IRRPDRSYEVRFGGRVELQPDSDRLRPRWVPAETVLAIPYDVPVPGYRTDTVNTLRLWSAE-APEEFDLDAFNAGDYYEA 239 (794)
T ss_pred eecCCcEEEEEeCCEEeeeccCCcceeEeeCceEEEEeecceeecCCCCCceEEEEEEEec-CccccCHhhccCccHhhh
Confidence 999999999999999975433 6444 999999999999999999999999999999999 567899999999999999
Q ss_pred HhhhhhhccccccccCCCCchhhhhhhhhhhhHHHHhHHHHHHHHHHHcccCcccccCCCceEEEeCCCcccccHHHHHH
Q 003188 273 AQLHSRAQQICAVLYPGDSTEEGKLLRLKQQFFLCSASLQDMILRFKERKSGRQWSEFPSKVAVQLNDTHPTLAIPELMR 352 (840)
Q Consensus 273 ~~~~~~~~~It~~LYp~D~~~~Gk~lRL~Qeyfl~~a~lqdiir~~~~~~g~~~l~~l~~~~viHlNDtHpalaipElmR 352 (840)
+++++.+|+||++|||+|++++||+||||||||||+||+|||+|+|++.+ .+++.|++|++||||||||||++|||||
T Consensus 240 ~~~~~~~e~It~vLYp~D~~~~Gk~lRLkQeyfl~~aglqdiir~~~~~~--~~l~~l~~~~~ihlNDtHpalai~ElmR 317 (794)
T TIGR02093 240 VEEKNRAENISRVLYPNDSTYEGKELRLKQQYFFVSASLQDIIRRHLETH--PDLSDFPKKVAIQLNDTHPALAIPELMR 317 (794)
T ss_pred hhChhhcCccccCCcCCCCccchHHHHHHHHHHhhhhHHHHHHHHHHHhC--CChhhCCcceEEEecCCchHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999988 4799999999999999999999999999
Q ss_pred HHHhhcCCChhHHhhhcCccEEEeecCChhhhHhhccHHHHHhhchhHHHHHHHHHHHHHHHHHHhcCCCcccccccccc
Q 003188 353 LLMDEEGLGWDEAWDITTRTVAYTNHTVLPEALEKWSQAVMWKLLPRHMEIIEEIDKRFIAMVRSTRSDLESKIPSMCIL 432 (840)
Q Consensus 353 ~l~d~~~l~~~~A~~i~~~~~vfT~HT~~~eglE~w~~~l~~~lLPr~~~ii~~in~~f~~~~~~~~~~~~~~~~~~~ii 432 (840)
+|+|++|++|++||++|+++|+||||||+|||+|+||++||+++||||++||++||++|+..++..+|.|++++.+|+||
T Consensus 318 ~L~d~~gl~wd~Aw~iv~~~~~yTnHT~lpealE~wp~~l~~~~Lpr~~~iI~~In~~fl~~~~~~~p~d~~~~~~~sii 397 (794)
T TIGR02093 318 LLIDEEGMDWDEAWDITTKTFAYTNHTLLPEALEKWPVDLFQKLLPRHLEIIYEINRRFLAELAAKGPGDEAKIRRMSII 397 (794)
T ss_pred HHHHhcCCCHHHHHHHHHhheecccCCCChHHhCCcCHHHHHHHHhHHHHHHHHHhHHHHHHHHHhCCCcHHHHhheeee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCC-cccccccccccCCcccchhhhhHHHHHhhhhcCccccCCCCCcccccccCcccccccCChhhhHHHHhhcCc
Q 003188 433 DNNPKKP-VVRMANLCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPRRWLRFCNPELSKIITKWLKT 511 (840)
Q Consensus 433 e~~~~~~-~v~Ma~lai~~S~~VNgVS~lH~eilk~~~f~~~~~l~p~k~~~iTNGI~~rrWl~~~NP~l~~li~~~~g~ 511 (840)
++ +.+ +||||+|||++||+|||||+||++++|+.+|++|+.+||++|+|||||||+|||+.+|||+|++||++++|
T Consensus 398 ~~--~~~~~v~Ma~LAi~~S~~vNGVS~lH~eilk~~~~~df~~l~P~kf~n~TNGVt~rrWl~~~np~L~~Li~~~ig- 474 (794)
T TIGR02093 398 EE--GQSKRVRMANLAIVGSHSVNGVAALHTELLKEDLLKDFYELYPEKFNNKTNGITPRRWLRLANPGLSALLTETIG- 474 (794)
T ss_pred ec--CCCCEEehHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHhhCCCccCCcCCCCCccchhhhcCHHHHHHHHHhcC-
Confidence 97 434 79999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccChhhHhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCceEeecccchhhhhhhhhhhHHHHHHH
Q 003188 512 DQWVTNLDLLVGLRQFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYK 591 (840)
Q Consensus 512 ~~w~~~~~~l~~l~~~~~d~~~~~~~~~~K~~nK~~L~~~i~~~~G~~~dp~~l~d~~vkR~heYKRq~Lnll~ii~~y~ 591 (840)
++|.+|++.|++|+++++|++|+++|+++|++||++|++||++++|+.+||+++||||||||||||||+||+|+++++|.
T Consensus 475 ~~W~~d~~~l~~l~~~~~D~~f~~~l~~vK~~nK~~L~~~i~~~~g~~ldp~slfdvq~KR~heYKRq~LNil~ii~~y~ 554 (794)
T TIGR02093 475 DDWLTDLDLLKKLEPYADDSEFLEEFRQVKQANKQRLAAYIKEHTGVEVDPNSIFDVQVKRLHEYKRQLLNVLHVIYLYN 554 (794)
T ss_pred chhhhcHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHhcCCccCccccchhhheechhhhHHHHHHhhhHHHHH
Confidence 59999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcCCCCcceEEEEcCCCHHHHhhhccCcccccc
Q 003188 592 KLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQH 671 (840)
Q Consensus 592 ~ik~~~p~~~~~~~p~~~If~GKA~P~y~~aK~iIk~I~~la~~in~d~~~~~~lkVvFl~nYnvslA~~ii~gaDv~l~ 671 (840)
+|++ ||+. +++|+||||||||||+|.+||+|||+|+++|++||+||+++++|||||+|||+|++|++|+||||||||
T Consensus 555 ~i~~-~p~~--~~~P~~~IFaGKAaP~y~~aK~iIklI~~va~~iN~Dp~v~~~lkVVFlenY~VslAe~iipaaDvseq 631 (794)
T TIGR02093 555 RIKE-DPPK--DIVPRTVIFGGKAAPGYHMAKLIIKLINSVAEVVNNDPAVGDKLKVVFVPNYNVSLAELIIPAADLSEQ 631 (794)
T ss_pred HHHh-CCCc--CCCCeEEEEEecCCCCcHHHHHHHHHHHHHHHHhccChhhCCceeEEEeCCCChHHHHHhhhhhhhhhh
Confidence 9998 7764 578999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCccCCCcchhHHhhcCceEeeecCchhHHHHHHhcCcceEeecCccccchhhhhhccCCC---CCCChhHHHHHHH
Q 003188 672 ISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAVAEQVPKLRKEREDGL---FKPDPRFEEAKQF 748 (840)
Q Consensus 672 iS~a~~EAsGTs~MKam~NGal~i~tlDGanvEi~~~vG~~N~~~fG~~~d~V~~~~~~~~y~~---~~~~~~l~~v~~~ 748 (840)
|||||+||||||||||||||+|||||||||||||+++||+||+|+||++++||.+++++| |+| ++.+|+|++|+|+
T Consensus 632 istag~EASGTsnMK~alNGaltlgtlDGanvEi~e~vG~eN~fiFG~~~~ev~~~~~~~-Y~~~~~y~~~~~l~~~~d~ 710 (794)
T TIGR02093 632 ISTAGKEASGTGNMKFMLNGALTIGTLDGANVEIREEVGAENIFIFGLTVEEVEALREKG-YNPREYYEADPELKRVLDL 710 (794)
T ss_pred CCCCCccccCcchhHHHhcCcceeecccchhHHHHHHhCcccEEEcCCCHHHHHHHHHcC-CCchhcccCCHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999888 998 5889999999999
Q ss_pred HhcCCCCCCC---hHHHHHHHhhCCCCCCCccccccCChHHHHHHHHHHHHHhcCHHHHHHHHHHHhccCCCCChHHHHH
Q 003188 749 IRSGAFGSYD---YNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYKDQKKWLKMSILSTAGSGKFSSDRTIA 825 (840)
Q Consensus 749 ~~~G~f~~~~---~~~l~~~L~~~~~~~~~D~~~~~~Df~~y~~~~~~~~~~Y~d~~~W~~~~~~n~a~~g~FSsDrti~ 825 (840)
|.+|+|++.+ |++|+++|+.+ +|+||||+||+||++||++|+++|+|+++|++|++.|||+||+|||||||+
T Consensus 711 i~~g~f~~~~~~~f~~l~~~l~~~-----~D~y~vl~Df~sY~~~q~~v~~~Y~d~~~W~~~~i~Nia~~G~FSsDRtI~ 785 (794)
T TIGR02093 711 ISSGTFSPGDPGLFRPLYDSLLNH-----GDPFFVLADFAAYVDAQERVDALYRDQLEWTKKSILNIANSGKFSSDRTIR 785 (794)
T ss_pred HhcCCCCCCCchHHHHHHHHHccC-----CCeeeeeccHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhCCCCcCCchhHH
Confidence 9999998765 99999999866 899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcc
Q 003188 826 QYAKEIWNI 834 (840)
Q Consensus 826 eYa~~iw~~ 834 (840)
|||++||++
T Consensus 786 eYa~~IW~~ 794 (794)
T TIGR02093 786 EYAKEIWHV 794 (794)
T ss_pred HHHHHhhCc
Confidence 999999985
No 3
>PRK14985 maltodextrin phosphorylase; Provisional
Probab=100.00 E-value=8.3e-246 Score=2114.95 Aligned_cols=787 Identities=44% Similarity=0.751 Sum_probs=766.6
Q ss_pred CCHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCceEEEEEehhccccchhHHhhc
Q 003188 27 NEPSAIASNISYHVQYSPHFSPTKFEPEQAFFATAESVRDRLIQQWNETYHHFNKVDPKQTYYLSMEFLQGRTLTNAIGS 106 (840)
Q Consensus 27 ~~~~~~~~~~~~~l~~~~g~~~~~at~~~~y~ala~~vrd~l~~~w~~t~~~~~~~~~k~vyYlSmEfl~Gr~L~nnl~N 106 (840)
.++++|+++|.+||++++|+++.+||+.++|+|||.+|||+|+++ ++.+.+.+.|+||||||||||||+|.|||+|
T Consensus 5 ~~~~~~~~~~~~~l~~~~~~~~~~a~~~~~y~ala~~vrd~l~~~----~~~~~~~~~k~vyYlS~EfL~Gr~l~nnl~n 80 (798)
T PRK14985 5 FNKKQFQAALTRQWQRFGLNSAAEMTPRQWWQAVSAALAELLRAQ----PAAKPVANQRHVNYISMEFLIGRLTGNNLLN 80 (798)
T ss_pred CCHHHHHHHHHHHHHHHhCCChhhCCHHHHHHHHHHHHHHHHHHH----HHHHhhcCCcEEEEechhhhccHHHHHHHHh
Confidence 468899999999999999999999999999999999999999998 5667778899999999999999999999999
Q ss_pred cChHHHHHHHHHhcCCChHHHHhhccccCCCCCCcccchhhhHhhhhccCCCeEEEeeccCCccceEEeeCCceeecccc
Q 003188 107 LDIQNAYADALNNLGHVLEEIAEQEKDAALGNGGLGRLASCFLDSMATLNLPAWGYGLRYRYGLFKQKITKQGQEEVAED 186 (840)
Q Consensus 107 Lg~~~~~~eaL~~lg~~~~~l~~~E~d~~LgnGGLGrLAac~ldS~a~l~~p~~G~GlrY~~G~F~Q~i~dG~Q~E~pd~ 186 (840)
||++++++|||++||+|+++|+++|+||||||||||||||||||||||||+|++||||||+||||+|+|+||+|+|.||.
T Consensus 81 lgl~~~~~~al~~lg~~l~~i~~~E~Da~LGnGGLGrLAacfldS~AtL~lP~~GyGirY~yG~F~Q~I~dG~Q~E~pd~ 160 (798)
T PRK14985 81 LGWYDDVQDVLKAYDINLTDLLEEETDPALGNGGLGRLAACFLDSMATVGQPATGYGLNYQYGLFRQSFVDGKQVEAPDD 160 (798)
T ss_pred cCCHHHHHHHHHHcCCCHHHHhccCCCCCCCCcchHHHHHHHHHHHHhCCCCeEEEEeccCCCCeEEEEECCeEEECCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCcccccCCeeEEEEECCeEEEcCCCceeeeCCeEEEEEEeeeccCCCCCCceEEEEEEEEEcCCCCccccccCc
Q 003188 187 WLEKFSPWEVVRHDVVFPVRFFGSVMVNPNGTRKWVGGEVVQAVAYDIPIPGYKTKNTISLRLWDAKASAEDFNLFQFND 266 (840)
Q Consensus 187 Wl~~~~pwe~~r~~~~~~V~f~g~~~~~~~g~~~w~~~~~v~av~yd~pi~gy~~~~~~~lrLw~a~v~~~~~~l~~~~~ 266 (840)
|+..++|||++|++..++|+|+|+++.. +|+.+|++++.|.|||||+|||||+|+++|+||||++++ ..+|++..||.
T Consensus 161 Wl~~~~pwe~~r~~~~~~V~f~G~v~~~-~G~~~w~~~~~v~avpyDvpi~Gy~~~~~n~LRLW~a~~-~~~~~l~~fn~ 238 (798)
T PRK14985 161 WHRDSYPWFRHNEALDVQVGIGGKVTKQ-DGRERWEPAFTITGEAWDLPVVGYRNGVAQPLRLWQATH-AHPFDLTKFND 238 (798)
T ss_pred cccCCCCceecCCCceEEEeeCCEEEee-CCcEEEECCEEEEEEeccccccCCCCCceEEEEEeEcCC-CCccCHHHcCC
Confidence 9999999999999999999999999764 787789999999999999999999999999999999995 55899999999
Q ss_pred chhhhhHhhhhhhccccccccCCCCchhhhhhhhhhhhHHHHhHHHHHHHHHHHcccCcccccCCCceEEEeCCCccccc
Q 003188 267 GQYESAAQLHSRAQQICAVLYPGDSTEEGKLLRLKQQFFLCSASLQDMILRFKERKSGRQWSEFPSKVAVQLNDTHPTLA 346 (840)
Q Consensus 267 ~~y~~a~~~~~~~~~It~~LYp~D~~~~Gk~lRL~Qeyfl~~a~lqdiir~~~~~~g~~~l~~l~~~~viHlNDtHpala 346 (840)
|+|.+|+++++.+|+||++|||+|++++||+||||||||||+||+|||+|+|++.| ++|+.||+|++||||||||||+
T Consensus 239 gdy~~a~en~~~~e~It~~LYp~D~~~~Gk~lRLkQEyfl~sa~vqdilr~~~~~~--~~l~~l~~~~~ihlNDtHpala 316 (798)
T PRK14985 239 GDFLRAEQQGIDAEKLTKVLYPNDNHTAGKKLRLMQQYFQCACSVADILRRHHLAG--RKLHELPDYEVIQLNDTHPTIA 316 (798)
T ss_pred cchhhccccchhhcchhceecCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhcC--CChhhCCCCcEEEecCCcHHHH
Confidence 99999999999999999999999999999999999999999999999999999876 6899999999999999999999
Q ss_pred HHHHHHHHHhhcCCChhHHhhhcCccEEEeecCChhhhHhhccHHHHHhhchhHHHHHHHHHHHHHHHHHHhcCCCcccc
Q 003188 347 IPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEALEKWSQAVMWKLLPRHMEIIEEIDKRFIAMVRSTRSDLESKI 426 (840)
Q Consensus 347 ipElmR~l~d~~~l~~~~A~~i~~~~~vfT~HT~~~eglE~w~~~l~~~lLPr~~~ii~~in~~f~~~~~~~~~~~~~~~ 426 (840)
+|||||+|+|++|++|++||++|+++|+||||||+|||+|+||++||+++||||++||++||++|+..++..+|.+.+++
T Consensus 317 i~ElmR~L~d~~gl~wd~Aw~iv~~~~~yTnHT~lpealE~w~~~l~~~~Lpr~~~ii~~in~~fl~~~~~~~~~d~~~~ 396 (798)
T PRK14985 317 IPELLRVLLDEHQLSWDDAWAITSKTFAYTNHTLMPEALECWDEKLVKSLLPRHMQIIKEINTRFKTLVEKTWPGDKKVW 396 (798)
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHheeeecCCCChhhhCCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHHhCCCcHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccccCCCCCCcccccccccccCCcccchhhhhHHHHHhhhhcCccccCCCCCcccccccCcccccccCChhhhHHHH
Q 003188 427 PSMCILDNNPKKPVVRMANLCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPRRWLRFCNPELSKIIT 506 (840)
Q Consensus 427 ~~~~iie~~~~~~~v~Ma~lai~~S~~VNgVS~lH~eilk~~~f~~~~~l~p~k~~~iTNGI~~rrWl~~~NP~l~~li~ 506 (840)
.+|+||++ ++||||+|||++||+|||||+||++++++.+|++|+.+||++|+|||||||+|||+.+|||+|++||+
T Consensus 397 ~~~sii~~----~~v~Ma~LAi~~S~~vNGVS~lH~eil~~~~f~df~~l~p~kf~nvTNGVt~rrWl~~~np~L~~Li~ 472 (798)
T PRK14985 397 AKLAVVHD----KQVRMANLCVVSGFAVNGVAALHSDLVVKDLFPEYHQLWPNKFHNVTNGITPRRWIKQCNPALAALLD 472 (798)
T ss_pred hhhhhccC----CeeehHHHHHHhcchhHhhHHHHhchhHHhhhhhhHhhCCCccCCcCCCcCcchhhhhhCHHHHHHHH
Confidence 99999986 48999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcCccccccChhhHhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCceEeecccchhhhhhhhhhhHH
Q 003188 507 KWLKTDQWVTNLDLLVGLRQFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGA 586 (840)
Q Consensus 507 ~~~g~~~w~~~~~~l~~l~~~~~d~~~~~~~~~~K~~nK~~L~~~i~~~~G~~~dp~~l~d~~vkR~heYKRq~Lnll~i 586 (840)
+++| ++|.+|+++|++|+++.+|++|+++|+++|++||++|++||++++|+.+||+++||||||||||||||+||+|++
T Consensus 473 ~~ig-~~W~~d~~~l~~l~~~~~D~~f~~~~~~vK~~nK~~L~~~i~~~~g~~ldp~slfdvq~kR~heYKRq~Lnil~i 551 (798)
T PRK14985 473 KTLK-KEWANDLDQLINLEKYADDAAFRQQYREIKQANKVRLAEFVKQRTGIEINPQAIFDVQIKRLHEYKRQHLNLLHI 551 (798)
T ss_pred HhcC-cchhhChHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCccCchhcchhhHhhhhhhhhhhhHhhhh
Confidence 9999 599999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcCCCCcceEEEEcCCCHHHHhhhccCc
Q 003188 587 IYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGS 666 (840)
Q Consensus 587 i~~y~~ik~~~p~~~~~~~p~~~If~GKA~P~y~~aK~iIk~I~~la~~in~d~~~~~~lkVvFl~nYnvslA~~ii~ga 666 (840)
+++|.+|++ ||+. +++|+||||||||||+|.+||+|||+|+++|++||+||+++++|||||+|||+|++|++|+|||
T Consensus 552 i~~y~~i~~-~p~~--~~~P~~~IFaGKAaP~y~~aK~iIklI~~va~~in~Dp~v~~~lkVVFlenY~VslAe~lipaa 628 (798)
T PRK14985 552 LALYKEIRE-NPQA--DRVPRVFLFGAKAAPGYYLAKNIIFAINKVAEVINNDPLVGDKLKVVFLPDYCVSAAELLIPAA 628 (798)
T ss_pred HHHHHHHHh-CCCc--CCCCeEEEEeecCCCCcHHHHHHHHHHHHHHHHhcCChhhCCceeEEEeCCCChHHHHHHhhhh
Confidence 999999998 7764 5789999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCCCCccCCCcchhHHhhcCceEeeecCchhHHHHHHhcCcceEeecCccccchhhhhhccCCC---CCCChhHH
Q 003188 667 ELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAVAEQVPKLRKEREDGL---FKPDPRFE 743 (840)
Q Consensus 667 Dv~l~iS~a~~EAsGTs~MKam~NGal~i~tlDGanvEi~~~vG~~N~~~fG~~~d~V~~~~~~~~y~~---~~~~~~l~ 743 (840)
||||||||||+||||||||||||||+|||||||||||||+++||++|+|+||++++||.+++++| |+| ++.+|+|+
T Consensus 629 Dvseqis~ag~EASGTsnMK~amNGaLtlgtlDGanvEi~e~vG~eN~f~fG~~~~ev~~~~~~~-y~~~~~y~~~~~l~ 707 (798)
T PRK14985 629 DISEQISTAGKEASGTGNMKLALNGALTVGTLDGANVEIAEQVGEENIFIFGHTVEQVKALLAKG-YDPVKWRKKDKVLD 707 (798)
T ss_pred hhhhhCCCCCccccCcchhHHHhcCceeeecccchHHHHHHHhCcCcEEEeCCCHHHHHHHHHcC-CChhhhccCCHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999888 998 58899999
Q ss_pred HHHHHHhcCCCCCCC---hHHHHHHHhhCCCCCCCccccccCChHHHHHHHHHHHHHhcCHHHHHHHHHHHhccCCCCCh
Q 003188 744 EAKQFIRSGAFGSYD---YNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYKDQKKWLKMSILSTAGSGKFSS 820 (840)
Q Consensus 744 ~v~~~~~~G~f~~~~---~~~l~~~L~~~~~~~~~D~~~~~~Df~~y~~~~~~~~~~Y~d~~~W~~~~~~n~a~~g~FSs 820 (840)
+|+|+|.+|+|++.+ |++|+++|+.+ +|+||||+||+||++||++|.++|.|+++|++|++.|||+||+|||
T Consensus 708 ~v~d~i~~g~f~~~~~~~f~~i~~~l~~~-----~D~y~vl~Df~sY~~~q~~v~~~y~d~~~W~~~~i~Nia~~G~FSs 782 (798)
T PRK14985 708 AVLKELESGKYSDGDKHAFDQMLHSLKQG-----GDPYLVLADFAAYVEAQKQVDALYRDQEAWTRAAILNTARCGMFSS 782 (798)
T ss_pred HHHHHHhcCCCCCCCchhHHHHHHHHhhC-----CCeeEeeccHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHccCCcCc
Confidence 999999999998766 99999999866 8999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhccc
Q 003188 821 DRTIAQYAKEIWNIT 835 (840)
Q Consensus 821 Drti~eYa~~iw~~~ 835 (840)
||||+|||++||+++
T Consensus 783 DRtI~eYa~~IW~~~ 797 (798)
T PRK14985 783 DRSIRDYQARIWQAK 797 (798)
T ss_pred HHHHHHHHHHhhCCC
Confidence 999999999999986
No 4
>cd04300 GT1_Glycogen_Phosphorylase This is a family of oligosaccharide phosphorylases. It includes yeast and mammalian glycogen phosphorylases, plant starch/glucan phosphorylase, as well as the maltodextrin phosphorylases of bacteria. The members of this family catalyze the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The allosteric control mechanisms of yeast and mammalian members of this family are different from that of bacterial members. The members of this family belong to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=100.00 E-value=1.3e-245 Score=2124.05 Aligned_cols=787 Identities=55% Similarity=0.901 Sum_probs=764.9
Q ss_pred HHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCceEEEEEehhccccchhHHhhccChHHH
Q 003188 33 ASNISYHVQYSPHFSPTKFEPEQAFFATAESVRDRLIQQWNETYHHFNKVDPKQTYYLSMEFLQGRTLTNAIGSLDIQNA 112 (840)
Q Consensus 33 ~~~~~~~l~~~~g~~~~~at~~~~y~ala~~vrd~l~~~w~~t~~~~~~~~~k~vyYlSmEfl~Gr~L~nnl~NLg~~~~ 112 (840)
+++|.+||++++|+++++||++++|+|||.+|||+++++|.+|++++.+.+.|+||||||||||||+|.|||+|||++++
T Consensus 1 ~~~~~~~l~~~~~~~~~~a~~~~~y~al~~~vrd~l~~~w~~t~~~~~~~~~k~vyYlS~EfL~Gr~L~nnl~nLgl~~~ 80 (797)
T cd04300 1 KKAIVDHLEYTLGKDPEEATDRDLYQALAYAVRDRLVERWNRTQQYYYDKDAKRVYYLSLEFLMGRLLGNNLLNLGLYDE 80 (797)
T ss_pred ChHHHHHHHHHhCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEEchhhhcchHHHHHHHhCCcHHH
Confidence 36799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCChHHHHhhccccCCCCCCcccchhhhHhhhhccCCCeEEEeeccCCccceEEeeCCceeeccccccccCC
Q 003188 113 YADALNNLGHVLEEIAEQEKDAALGNGGLGRLASCFLDSMATLNLPAWGYGLRYRYGLFKQKITKQGQEEVAEDWLEKFS 192 (840)
Q Consensus 113 ~~eaL~~lg~~~~~l~~~E~d~~LgnGGLGrLAac~ldS~a~l~~p~~G~GlrY~~G~F~Q~i~dG~Q~E~pd~Wl~~~~ 192 (840)
+++||++||+++++|+++|+||||||||||||||||||||||||+|++||||||+||||+|+|++|||+|.||+|+..++
T Consensus 81 ~~~~L~~lg~~l~~i~~~E~Da~LGnGGLGrLAacfldS~AtLglP~~G~GirY~yG~F~Q~i~~G~Q~E~pd~Wl~~~~ 160 (797)
T cd04300 81 VREALAELGVDLEDLEEQEPDAGLGNGGLGRLAACFLDSLATLGLPGYGYGIRYEYGLFKQKIVDGYQVELPDNWLRYGN 160 (797)
T ss_pred HHHHHHHhCCCHHHHHhcCCCCCCCCCCcchhHHHHHHHHHhCCCCeEEEEecccCCCeEEEEECCEEEecCCCccCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccccCCeeEEEEECCeEEEcCC-Ccee--eeCCeEEEEEEeeeccCCCCCCceEEEEEEEEEcCCCCccccccCcchh
Q 003188 193 PWEVVRHDVVFPVRFFGSVMVNPN-GTRK--WVGGEVVQAVAYDIPIPGYKTKNTISLRLWDAKASAEDFNLFQFNDGQY 269 (840)
Q Consensus 193 pwe~~r~~~~~~V~f~g~~~~~~~-g~~~--w~~~~~v~av~yd~pi~gy~~~~~~~lrLw~a~v~~~~~~l~~~~~~~y 269 (840)
|||++|++.+|+|+|+|+++...+ |+.+ |++++.|+|||||+|||||+++++|+||||+++ +...||++.|+.++|
T Consensus 161 pwe~~r~~~~~~V~f~G~~~~~~~~G~~~~~w~~~~~v~avpyDvpi~Gy~~~~~n~LRLW~a~-~~~~~dl~~fn~gdy 239 (797)
T cd04300 161 PWEIRRPDVAVPVRFGGRVEHYEDGGRLRVRWVDGETVLAVPYDTPIPGYGTNTVNTLRLWSAE-ASEEFDLDAFNRGDY 239 (797)
T ss_pred CceEecCCcEEEEEECCEEEEeecCCcceeeecCcceEEeeecceeecCCCCCceEEEEEEEee-CCCCcCHHHhcCCch
Confidence 999999999999999999975433 6544 999999999999999999999999999999999 566899999999999
Q ss_pred hhhHhhhhhhccccccccCCCCchhhhhhhhhhhhHHHHhHHHHHHHHHHHcccCcccccCCCceEEEeCCCcccccHHH
Q 003188 270 ESAAQLHSRAQQICAVLYPGDSTEEGKLLRLKQQFFLCSASLQDMILRFKERKSGRQWSEFPSKVAVQLNDTHPTLAIPE 349 (840)
Q Consensus 270 ~~a~~~~~~~~~It~~LYp~D~~~~Gk~lRL~Qeyfl~~a~lqdiir~~~~~~g~~~l~~l~~~~viHlNDtHpalaipE 349 (840)
.+++++++.+|+||++|||+|++++||+|||+||||||+||+|+|+|+|++.++ +++.|+++++||||||||||++||
T Consensus 240 ~~a~~~~~~~~~It~~LYp~Ds~~~Gk~lRL~Qeyfl~sag~qdilr~~~~~~~--~~~~l~~~~~ihlNDtHpalai~E 317 (797)
T cd04300 240 IRAVEEKNRAENISKVLYPNDSTEEGKELRLKQQYFFVSASLQDIIRRFKKTHG--PLSEFPDKVAIQLNDTHPALAIPE 317 (797)
T ss_pred hhHHhhHHHhhhhhcccCCCCCchhHHHHHHHHHHHHhhhHHHHHHHHHHHhCC--ChhhCCCceEEEecCCcHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999984 789999999999999999999999
Q ss_pred HHHHHHhhcCCChhHHhhhcCccEEEeecCChhhhHhhccHHHHHhhchhHHHHHHHHHHHHHHHHHHhcCCCccccccc
Q 003188 350 LMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEALEKWSQAVMWKLLPRHMEIIEEIDKRFIAMVRSTRSDLESKIPSM 429 (840)
Q Consensus 350 lmR~l~d~~~l~~~~A~~i~~~~~vfT~HT~~~eglE~w~~~l~~~lLPr~~~ii~~in~~f~~~~~~~~~~~~~~~~~~ 429 (840)
|||+|+|++|++|++||++|+++|+||||||+|||+|+||++||+++||||++||++||++|+.+++..+|.+++++.+|
T Consensus 318 lmR~L~d~~gl~w~~Aw~i~~~~~~yTnHT~lpealE~wp~~l~~~~lpr~~~II~~In~~~~~~~~~~~~~~~~~~~~l 397 (797)
T cd04300 318 LMRILVDEEGLDWDEAWDITTKTFAYTNHTLLPEALEKWPVDLFERLLPRHLEIIYEINRRFLEEVRAKYPGDEDRIRRM 397 (797)
T ss_pred HHHHHHHhcCCCHHHHHHHHHhheeeecCCCchHHhCccCHHHHHHHChHHHHHHHHHHHHHHHHHHHhcCCCHHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCCC-cccccccccccCCcccchhhhhHHHHHhhhhcCccccCCCCCcccccccCcccccccCChhhhHHHHhh
Q 003188 430 CILDNNPKKP-VVRMANLCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPRRWLRFCNPELSKIITKW 508 (840)
Q Consensus 430 ~iie~~~~~~-~v~Ma~lai~~S~~VNgVS~lH~eilk~~~f~~~~~l~p~k~~~iTNGI~~rrWl~~~NP~l~~li~~~ 508 (840)
+||++ +.+ +||||+|||++||+|||||+||++++|+++|++|+.+||+||+|||||||+|||+.+|||+|++||+++
T Consensus 398 ~ii~~--~~~~~v~Ma~LAi~~S~~vNGVS~lH~ei~k~~~~~df~~l~P~kf~n~TNGVt~rrWl~~~np~L~~Li~~~ 475 (797)
T cd04300 398 SIIEE--GGEKQVRMAHLAIVGSHSVNGVAALHSELLKETVFKDFYELYPEKFNNKTNGITPRRWLLQANPGLSALITET 475 (797)
T ss_pred ccccc--CCCCEEehHHHHHhcCcchhhhHHHHHHHHHHhhHHHHHhhCCCccCCcCCCCCcchhhhhcCHHHHHHHHHh
Confidence 99986 333 799999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCccccccChhhHhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCceEeecccchhhhhhhhhhhHHHH
Q 003188 509 LKTDQWVTNLDLLVGLRQFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIY 588 (840)
Q Consensus 509 ~g~~~w~~~~~~l~~l~~~~~d~~~~~~~~~~K~~nK~~L~~~i~~~~G~~~dp~~l~d~~vkR~heYKRq~Lnll~ii~ 588 (840)
+| ++|.+|+++|++|+++++|++|+++|+++|++||++|++||++++|+.+||+++||||||||||||||+||+|++++
T Consensus 476 ig-~~W~~d~~~l~~l~~~~~D~~f~~~l~~~K~~nK~~L~~~i~~~~g~~ldp~slfdvq~KR~heYKRq~LNil~ii~ 554 (797)
T cd04300 476 IG-DDWVTDLDQLKKLEPFADDPAFLKEFRAIKQANKERLAAYIKKTTGVEVDPDSLFDVQVKRIHEYKRQLLNVLHIIH 554 (797)
T ss_pred cC-chhhhChHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCccCCCccEEEEeeechhhhhhhhHHHhhHH
Confidence 99 59999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcCCCCcceEEEEcCCCHHHHhhhccCccc
Q 003188 589 RYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSEL 668 (840)
Q Consensus 589 ~y~~ik~~~p~~~~~~~p~~~If~GKA~P~y~~aK~iIk~I~~la~~in~d~~~~~~lkVvFl~nYnvslA~~ii~gaDv 668 (840)
+|.+|++ +|+. +++|+||||||||||+|.+||+|||+|+++|++||+||+++++|||||+|||+|++|++|+|||||
T Consensus 555 ~y~~i~~-~p~~--~~~P~~~IFaGKAaP~y~~aK~iIklI~~va~~in~Dp~v~~~lkVVFlenY~VslAe~iipaaDv 631 (797)
T cd04300 555 LYNRIKE-NPNA--DIVPRTFIFGGKAAPGYYMAKLIIKLINAVADVVNNDPDVGDKLKVVFLPNYNVSLAEKIIPAADL 631 (797)
T ss_pred HHHHHHh-CCCc--CCCCeEEEEeccCCCCcHHHHHHHHHHHHHHHHhccChhcCCceEEEEeCCCChHHHHHhhhhhhh
Confidence 9999998 7763 578999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCCccCCCcchhHHhhcCceEeeecCchhHHHHHHhcCcceEeecCccccchhhhhhccCCC---CCCChhHHHH
Q 003188 669 SQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAVAEQVPKLRKEREDGL---FKPDPRFEEA 745 (840)
Q Consensus 669 ~l~iS~a~~EAsGTs~MKam~NGal~i~tlDGanvEi~~~vG~~N~~~fG~~~d~V~~~~~~~~y~~---~~~~~~l~~v 745 (840)
||||||||+||||||||||||||+|||||||||||||+++||+||+|+||++++||.+++++| |+| ++.+|.|++|
T Consensus 632 seqis~ag~EASGTsnMK~~lNGaltlgtlDGanvEi~e~vG~eN~fiFG~~~~ev~~~~~~~-y~~~~~y~~~~~l~~v 710 (797)
T cd04300 632 SEQISTAGKEASGTGNMKFMLNGALTIGTLDGANVEIAEEVGEENIFIFGLTAEEVEALRANG-YYPADYYEADPELRRV 710 (797)
T ss_pred hhhCCCCCccccCCchhhHHhcCceeeecccchhHHHHHHhCcCcEEEeCCCHHHHHHHHHcC-CChHhhccCCHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999888 777 6889999999
Q ss_pred HHHHhcCCCCCCC---hHHHHHHHhhCCCCCCCccccccCChHHHHHHHHHHHHHhcCHHHHHHHHHHHhccCCCCChHH
Q 003188 746 KQFIRSGAFGSYD---YNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYKDQKKWLKMSILSTAGSGKFSSDR 822 (840)
Q Consensus 746 ~~~~~~G~f~~~~---~~~l~~~L~~~~~~~~~D~~~~~~Df~~y~~~~~~~~~~Y~d~~~W~~~~~~n~a~~g~FSsDr 822 (840)
+|++.+|+|++.+ |++|+++|+.+ +|+||||+||+||++||++|.++|+|+++|++|++.|||+||+|||||
T Consensus 711 ~d~i~~g~f~~~~~~~f~~i~~~l~~~-----~D~y~vl~Df~~Y~~~q~~v~~~Y~d~~~W~~~~i~Nia~~G~FSsDR 785 (797)
T cd04300 711 LDQIASGFFSPGDPGEFRPLVDSLLNG-----NDEYLVLADFESYVDAQEKVDALYRDQEEWARKSILNIARSGKFSSDR 785 (797)
T ss_pred HHHHhcCCCCCCCcHHHHHHHHHHccC-----CCeeEeeccHHHHHHHHHHHHHHccCHHHHHHHHHHHHHccCCcCCcc
Confidence 9999999997554 99999999876 899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcc
Q 003188 823 TIAQYAKEIWNI 834 (840)
Q Consensus 823 ti~eYa~~iw~~ 834 (840)
||+|||++||++
T Consensus 786 tI~eYa~~IW~~ 797 (797)
T cd04300 786 TIREYAEDIWNV 797 (797)
T ss_pred cHHHHHHHhhCc
Confidence 999999999985
No 5
>PRK14986 glycogen phosphorylase; Provisional
Probab=100.00 E-value=5.3e-245 Score=2115.40 Aligned_cols=803 Identities=45% Similarity=0.780 Sum_probs=779.4
Q ss_pred ccccCCCCCCHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCceEEEEEehhcccc
Q 003188 19 PAAANPLANEPSAIASNISYHVQYSPHFSPTKFEPEQAFFATAESVRDRLIQQWNETYHHFNKVDPKQTYYLSMEFLQGR 98 (840)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~at~~~~y~ala~~vrd~l~~~w~~t~~~~~~~~~k~vyYlSmEfl~Gr 98 (840)
|-+-..+.+++++|+++|.+||++++|+++++||+.++|+|||.+|||+++++|.+|++.+.+.+.|+||||||||||||
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~a~~~~~y~ala~~vrd~l~~~w~~t~~~~~~~~~k~vyYlS~EfL~Gr 83 (815)
T PRK14986 4 PFTYASPTLSVEALKHSIAYKLMFTIGKDPVIANKHEWLNATLFAVRDRLVERWLRSNRAQLSQETRQVYYLSMEFLIGR 83 (815)
T ss_pred CcCCCCCCCCHHHHHHHHHHHHHHHhCCChhhCCHHHHHHHHHHHHHHHHHHHHHHhHHHHHhcCCcEEEEEchhhhccH
Confidence 34445567889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhHHhhccChHHHHHHHHHhcCCChHHHHhhccccCCCCCCcccchhhhHhhhhccCCCeEEEeeccCCccceEEeeCC
Q 003188 99 TLTNAIGSLDIQNAYADALNNLGHVLEEIAEQEKDAALGNGGLGRLASCFLDSMATLNLPAWGYGLRYRYGLFKQKITKQ 178 (840)
Q Consensus 99 ~L~nnl~NLg~~~~~~eaL~~lg~~~~~l~~~E~d~~LgnGGLGrLAac~ldS~a~l~~p~~G~GlrY~~G~F~Q~i~dG 178 (840)
+|.|||+|||+++++++||++||+|+++|+++|+||||||||||||||||||||||||+|++||||||+||||+|+|.||
T Consensus 84 ~l~nnl~nlg~~~~~~~al~~lg~~l~~l~~~E~Da~LGnGGLGrLAac~ldS~A~LglP~~G~Gi~Y~yG~F~Q~I~dG 163 (815)
T PRK14986 84 TLSNALLSLGIYDDVQGALEAMGLDLEELIDEENDPGLGNGGLGRLAACFLDSLATLGLPGRGYGIRYDYGMFKQNIVNG 163 (815)
T ss_pred HHHHHHHhcCcHHHHHHHHHHcCCCHHHHHhcCCCCCCCCcchHHHHHHHHHHHHhCCCCeEEEEecccCCCeEEEEECC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceeeccccccccCCCcccccCCeeEEEEECCeEEEcCCCc-eeeeCCeEEEEEEeeeccCCCCCCceEEEEEEEEEcCCC
Q 003188 179 GQEEVAEDWLEKFSPWEVVRHDVVFPVRFFGSVMVNPNGT-RKWVGGEVVQAVAYDIPIPGYKTKNTISLRLWDAKASAE 257 (840)
Q Consensus 179 ~Q~E~pd~Wl~~~~pwe~~r~~~~~~V~f~g~~~~~~~g~-~~w~~~~~v~av~yd~pi~gy~~~~~~~lrLw~a~v~~~ 257 (840)
||+|.||+|+..|+|||++|++.+++|+|+|+++.. |. .+|+++++|+|||||+|||||+|+++|+||||+++ +.+
T Consensus 164 ~Q~E~pd~w~~~~~pwe~~r~~~~~~V~f~g~~~~~--g~~~~w~~~~~v~avpyD~pipgy~t~~vn~lRLW~a~-~~~ 240 (815)
T PRK14986 164 RQKESPDYWLEYGNPWEFKRHNTRYKVRFGGRIQQE--GKKTRWIETEEILAVAYDQIIPGYDTDATNTLRLWSAQ-ASS 240 (815)
T ss_pred EEEEcCCCccCCCCceeEecCCcEEEEEeCCEEEec--CceeEeeCCeeEEEEeCCccccCCCCCceEEEEEEEee-cCc
Confidence 999999999999999999999999999999999753 53 34999999999999999999999999999999999 677
Q ss_pred CccccccCcchhhhhHhhhhhhccccccccCCCCchhhhhhhhhhhhHHHHhHHHHHHHHHHHcccCcccccCCCceEEE
Q 003188 258 DFNLFQFNDGQYESAAQLHSRAQQICAVLYPGDSTEEGKLLRLKQQFFLCSASLQDMILRFKERKSGRQWSEFPSKVAVQ 337 (840)
Q Consensus 258 ~~~l~~~~~~~y~~a~~~~~~~~~It~~LYp~D~~~~Gk~lRL~Qeyfl~~a~lqdiir~~~~~~g~~~l~~l~~~~viH 337 (840)
+||+..||.|+|..++.+++.+|+||++|||+|++++||+||||||||||+||+|||+|+|++.+ ++++.|+++++||
T Consensus 241 ~fd~~~fn~g~y~~a~~~~n~~e~Is~~LYp~D~~y~Gk~lRLkQEyfl~~agv~di~r~~~~~~--~~l~~l~~~v~ih 318 (815)
T PRK14986 241 EINLGKFNQGDYFAAVEDKNHSENVSRVLYPDDSTYSGRELRLRQEYFLVSATVQDILSRHYQLH--KTYDNLADKIAIH 318 (815)
T ss_pred ccCHhhcccccHHHHhhccchhhccccccCCCCCCcccHHHHHHHHHHhhhHHHHHHHHHHHHhC--CCHhhCCcccEEE
Confidence 89999999999999999999999999999999999999999999999999999999999999998 5799999999999
Q ss_pred eCCCcccccHHHHHHHHHhhcCCChhHHhhhcCccEEEeecCChhhhHhhccHHHHHhhchhHHHHHHHHHHHHHHHHHH
Q 003188 338 LNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEALEKWSQAVMWKLLPRHMEIIEEIDKRFIAMVRS 417 (840)
Q Consensus 338 lNDtHpalaipElmR~l~d~~~l~~~~A~~i~~~~~vfT~HT~~~eglE~w~~~l~~~lLPr~~~ii~~in~~f~~~~~~ 417 (840)
||||||||++|||||+|+|++|++|++||++|+++|+||||||+|||+|+||++||+++||||++||++||++|+..+++
T Consensus 319 lNDtHpa~~i~ElmR~L~d~~gl~~~eA~~iv~~~~~fTnHT~lpealE~w~~~l~~~~lpr~l~Ii~eIn~~fl~~~~~ 398 (815)
T PRK14986 319 LNDTHPVLSIPELMRLLIDEHKFSWDDAFEVCCQVFSYTNHTLMSEALETWPVDMLGKILPRHLQIIFEINDYFLKTLQE 398 (815)
T ss_pred ecCCcHHHHHHHHHHHHHHhcCCCHHHHHHHHHhhEEeecccCChHHhCcCCHHHHHHHccHhhhHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCCCcccccccccccCCCCCC-cccccccccccCCcccchhhhhHHHHHhhhhcCccccCCCCCcccccccCccccccc
Q 003188 418 TRSDLESKIPSMCILDNNPKKP-VVRMANLCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPRRWLRF 496 (840)
Q Consensus 418 ~~~~~~~~~~~~~iie~~~~~~-~v~Ma~lai~~S~~VNgVS~lH~eilk~~~f~~~~~l~p~k~~~iTNGI~~rrWl~~ 496 (840)
.+|.+++++.+||||++ +.+ +||||+||+++||+|||||+||++++++.+|++|+.+||+||.+||||||+|||+.+
T Consensus 399 ~~~~~~~~~~~~sii~~--~~~~~v~Ma~LAl~~S~~vNGVS~lH~evl~~~~f~df~~l~P~kf~niTNGV~~rrWl~~ 476 (815)
T PRK14986 399 QYPNDTDLLGRASIIDE--SNGRRVRMAWLAVVVSHKVNGVSELHSNLMVQSLFADFAKIFPGRFCNVTNGVTPRRWLAL 476 (815)
T ss_pred hCCCcHHHHhhhhcccc--CCCCEEeeHHHHhhccchhhHHHHHHHHHHHHHHHHHHHhhCCCcccccCCCCChhhHhhh
Confidence 99999999999999986 334 899999999999999999999999998899999999999999999999999999999
Q ss_pred CChhhhHHHHhhcCccccccChhhHhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCceEeecccchhh
Q 003188 497 CNPELSKIITKWLKTDQWVTNLDLLVGLRQFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQVKRIHEY 576 (840)
Q Consensus 497 ~NP~l~~li~~~~g~~~w~~~~~~l~~l~~~~~d~~~~~~~~~~K~~nK~~L~~~i~~~~G~~~dp~~l~d~~vkR~heY 576 (840)
|||+|++||++++| ++|.+|+++|++|+++.+|++|+++|+++|++||++|++||++++|+.+||+++|||||||||||
T Consensus 477 ~np~L~~Li~~~ig-~~W~~d~~~l~~l~~~~~d~~f~~~l~~vk~~nK~~L~~~i~~~~g~~ldp~sLfd~qakR~heY 555 (815)
T PRK14986 477 ANPSLSAVLDEHIG-RTWRTDLSQLSELKQHCDYPMVNHAVRQAKLENKKRLAEYIAQQLNVVVNPKALFDVQIKRIHEY 555 (815)
T ss_pred cCHHHHHHHHHhcC-chhhhChHHHHHHHhhccCHHHHHHHHHHHHHHHHHHHHHHHHHhCCccCcccceeeeehhhhhh
Confidence 99999999999999 59999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhhHHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcCCCCcceEEEEcCCCH
Q 003188 577 KRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYLKVVFVPNYNV 656 (840)
Q Consensus 577 KRq~Lnll~ii~~y~~ik~~~p~~~~~~~p~~~If~GKA~P~y~~aK~iIk~I~~la~~in~d~~~~~~lkVvFl~nYnv 656 (840)
|||+||+|++++||.+|++ ||+. +++|+||||||||||+|.+||+|||+|+++|++|||||+++++|||||+|||+|
T Consensus 556 KRq~LNil~~i~ry~~i~~-~p~~--~~~P~~~IFaGKAaP~y~~aK~iIk~I~~va~~in~Dp~v~~~lkVVFlenY~v 632 (815)
T PRK14986 556 KRQLMNVLHVITRYNRIKA-DPDA--KWVPRVNIFAGKAASAYYMAKHIIHLINDVAKVINNDPQIGDKLKVVFIPNYSV 632 (815)
T ss_pred hhhhHHHhhhHHHHHHHHh-CCCc--CCCCeEEEEeecCCCCcHHHHHHHHHHHHHHHHhccChhhcCceeEEEeCCCCH
Confidence 9999999999999999998 7764 568999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhccCccccccCCCCCccCCCcchhHHhhcCceEeeecCchhHHHHHHhcCcceEeecCccccchhhhhhccCCC-
Q 003188 657 SVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAVAEQVPKLRKEREDGL- 735 (840)
Q Consensus 657 slA~~ii~gaDv~l~iS~a~~EAsGTs~MKam~NGal~i~tlDGanvEi~~~vG~~N~~~fG~~~d~V~~~~~~~~y~~- 735 (840)
++|++|+|||||||||||||+||||||||||||||+|||||||||||||+++||++|+|+||++++||.+++++| |+|
T Consensus 633 slAe~lipg~Dv~eqis~ag~EASGTsnMK~alNGaLtlgtlDG~nvEi~e~vG~eN~~~fG~~~~ev~~~~~~~-Y~~~ 711 (815)
T PRK14986 633 SLAQLIIPAADLSEQISLAGTEASGTSNMKFALNGALTIGTLDGANVEMLEHVGEENIFIFGNTAEEVEALRRQG-YKPR 711 (815)
T ss_pred HHHHHhhhhhhhhhhCCCCCccccCcchhhHHhcCceeeeccCCchhHHHHhcCCCcEEEeCCCHHHHHHHHHcC-CChh
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999888 998
Q ss_pred --CCCChhHHHHHHHHhcCCCCCCC---hHHHHHHHhhCCCCCCCccccccCChHHHHHHHHHHHHHhcCHHHHHHHHHH
Q 003188 736 --FKPDPRFEEAKQFIRSGAFGSYD---YNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYKDQKKWLKMSIL 810 (840)
Q Consensus 736 --~~~~~~l~~v~~~~~~G~f~~~~---~~~l~~~L~~~~~~~~~D~~~~~~Df~~y~~~~~~~~~~Y~d~~~W~~~~~~ 810 (840)
++.+|+|++++|++.+|+|++.+ |++|+++|+.+ +|+||||+||+||++||++|.++|+|+++|++|++.
T Consensus 712 ~~y~~~~~l~~~~d~i~~g~f~~~~~~~f~~i~~~l~~~-----~D~y~vl~Df~sY~~aq~~v~~~y~d~~~W~~~~i~ 786 (815)
T PRK14986 712 EYYEKDEELHQVLTQIGSGVFSPEEPGRYRDLVDSLINF-----GDHYQVLADYRSYVDCQDKVDELYRNQEEWTRKAML 786 (815)
T ss_pred hhccCCHHHHHHHHHHhcCCCCCCCchhHHHHHHHhccC-----CCeeEeeccHHHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence 57899999999999999998765 99999999866 899999999999999999999999999999999999
Q ss_pred HhccCCCCChHHHHHHHHHHHhcccccc
Q 003188 811 STAGSGKFSSDRTIAQYAKEIWNITECR 838 (840)
Q Consensus 811 n~a~~g~FSsDrti~eYa~~iw~~~~~~ 838 (840)
|||+||+|||||||+|||++||+++|++
T Consensus 787 Nia~~G~FSsDRtI~~Ya~~IW~~~p~~ 814 (815)
T PRK14986 787 NIANMGYFSSDRTIKEYADEIWHIDPVR 814 (815)
T ss_pred HHhCCCCcCCchhHHHHHHHhhCCCccC
Confidence 9999999999999999999999999986
No 6
>PF00343 Phosphorylase: Carbohydrate phosphorylase; InterPro: IPR000811 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 35 GT35 from CAZY comprises enzymes with only one known activity; glycogen and starch phosphorylase (2.4.1.1 from EC). The main role of glycogen phosphorylase (GPase) is to provide phosphorylated glucose molecules (G-1-P) []. GPase is a highly regulated allosteric enzyme. The net effect of the regulatory site allows the enzyme to operate at a variety of rates; the enzyme is not simply regulated as "on" or "off", but rather it can be thought of being set to operate at an ideal rate based on changing conditions at in the cell. The most important allosteric effector is the phosphate molecule covalently attached to Ser14. This switches GPase from the b (inactive) state to the a (active) state. Upon phosphorylation, GPase attains about 80% of its Vmax. When the enzyme is not phosphorylated, GPase activity is practically non-existent at low AMP levels. There is some apparent controversy as to the structure of GPase. All sources agree that the enzyme is multimeric, but there is apparent controversy as to the enzyme being a tetramer or a dimer. Apparently, GPase (in the a form) forms tetramers in the crystal form. The consensus seems to be that `regardless of the a or b form, GPase functions as a dimer in vivo []. The GPase monomer is best described as consisting of two domains, an N-terminal domain and a C-terminal domain []. The C-terminal domain is often referred to as the catalytic domain. It consists of a beta-sheet core surrounded by layers of helical segments []. The vitamin cofactor pyridoxal phosphate (PLP) is covalently attached to the amino acid backbone. The N-terminal domain also consists of a central beta-sheet core and is surrounded by layers of helical segments. The N-terminal domain contains different allosteric effector sites to regulate the enzyme. Bacterial phosphorylases follow the same catalytic mechanisms as their plant and animal counterparts, but differ considerably in terms of their substrate specificity and regulation. The catalytic domains are highly conserved while the regulatory sites are only poorly conserved. For maltodextrin phosphorylase from Escherichia coli the physiological role of the enzyme in the utilisation of maltidextrins is known in detail; that of all the other bacterial phosphorylases is still unclear. Roles in regulatuon of endogenous glycogen metabolism in periods of starvation, and sporulation, stress response or quick adaptation to changing environments are possible [].; GO: 0004645 phosphorylase activity, 0005975 carbohydrate metabolic process; PDB: 1YGP_B 2AW3_B 2AV6_B 1AHP_B 1QM5_A 1L5W_A 2ECP_A 2ASV_A 1L5V_B 1E4O_B ....
Probab=100.00 E-value=1.5e-224 Score=1922.29 Aligned_cols=705 Identities=53% Similarity=0.892 Sum_probs=638.4
Q ss_pred HHHhcCCChHHHHhhccccCCCCCCcccchhhhHhhhhccCCCeEEEeeccCCccceEEeeCCceeeccccccccCCCcc
Q 003188 116 ALNNLGHVLEEIAEQEKDAALGNGGLGRLASCFLDSMATLNLPAWGYGLRYRYGLFKQKITKQGQEEVAEDWLEKFSPWE 195 (840)
Q Consensus 116 aL~~lg~~~~~l~~~E~d~~LgnGGLGrLAac~ldS~a~l~~p~~G~GlrY~~G~F~Q~i~dG~Q~E~pd~Wl~~~~pwe 195 (840)
||++||+|+++|+++|+||||||||||||||||||||||||+|++||||||+||+|+|+|+||+|+|.||+||..|||||
T Consensus 1 Al~~lg~~~~~l~~~E~da~LGNGGLGRLAacfldSlAtl~~p~~GygirY~yG~F~Q~i~dG~QvE~pd~Wl~~g~pWe 80 (713)
T PF00343_consen 1 ALKELGFDLEELEEQEPDAGLGNGGLGRLAACFLDSLATLGIPAYGYGIRYEYGLFKQKIVDGWQVELPDNWLRYGNPWE 80 (713)
T ss_dssp HHHHTT--HHHHHTTS--EEESSSHHHHHHHHHHHHHHHTT-EEEEEEE--SCESEEEEEETTEEEEEEEBTTTTG-TTS
T ss_pred ChhHhCCCHHHHHhhCcCccccCcccchhHHHHHHHHHhCCCCceEEEeeecCCCceeEeecCCcccCCCCccCCCCceE
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCeeEEEEECCeEEEcCCCcee-eeCCeEEEEEEeeeccCCCCCCceEEEEEEEEEcCCCCccccccCcchhhhhHh
Q 003188 196 VVRHDVVFPVRFFGSVMVNPNGTRK-WVGGEVVQAVAYDIPIPGYKTKNTISLRLWDAKASAEDFNLFQFNDGQYESAAQ 274 (840)
Q Consensus 196 ~~r~~~~~~V~f~g~~~~~~~g~~~-w~~~~~v~av~yd~pi~gy~~~~~~~lrLw~a~v~~~~~~l~~~~~~~y~~a~~ 274 (840)
++|++.+|+|+|+|+|+. .+|+.. |+++++|+|||||+|||||+|++||+||||+|+ +.++||+..|+.|+|.+|++
T Consensus 81 ~~r~~~~~~V~f~G~v~~-~~~~~~~~~~~~~v~av~yD~pi~Gy~~~~vn~LRLw~a~-~~~~fd~~~fn~gdy~~a~~ 158 (713)
T PF00343_consen 81 IRRPDESYEVKFGGRVED-DGGRKVRWEDGETVLAVPYDMPIPGYRTKTVNTLRLWSAE-PSEEFDLESFNRGDYIKAVE 158 (713)
T ss_dssp EEEGGGEEEEEESEEEE--EETTEEEEESCEEEEEEEEEEEEE-SSSS-EEEEEEEEEE-ESSSTTHHHHHTTCHHHHHH
T ss_pred EecCCceEEEeccceEEe-cCCCcccccCCeEEEEEecCceeecCCCCceEEEEEeccC-CCcccChhhcCCCcHHHHHH
Confidence 999999999999999983 345544 999999999999999999999999999999999 88899999999999999999
Q ss_pred hhhhhccccccccCCCCchhhhhhhhhhhhHHHHhHHHHHHHHHHHcccCcccccCCCceEEEeCCCcccccHHHHHHHH
Q 003188 275 LHSRAQQICAVLYPGDSTEEGKLLRLKQQFFLCSASLQDMILRFKERKSGRQWSEFPSKVAVQLNDTHPTLAIPELMRLL 354 (840)
Q Consensus 275 ~~~~~~~It~~LYp~D~~~~Gk~lRL~Qeyfl~~a~lqdiir~~~~~~g~~~l~~l~~~~viHlNDtHpalaipElmR~l 354 (840)
+++.+|+||++|||+|++++||+||||||||||+||||||||+|++.+ .++++||++++||||||||||++||+||+|
T Consensus 159 ~~~~~e~is~vLYP~d~~~~Gk~LRLkQqyf~vsa~lqdiir~~~~~~--~~~~~~~~~~~ihlNdtHpa~ai~ElmR~L 236 (713)
T PF00343_consen 159 EKNRAENISKVLYPNDSTEEGKELRLKQQYFFVSASLQDIIRRFKKSH--GDLREFPDKVVIHLNDTHPAFAIPELMRIL 236 (713)
T ss_dssp HHHHHHGGGTBSS-SSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT--CCGGGHHHHEEEEEESSTTTTHHHHHHHHH
T ss_pred HHHHhhceeeecCCCCccccchhhhhhhHhhhhhhHHHHHHHHHHHhC--CChHHCCcceEEeecCCccHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999998 589999999999999999999999999999
Q ss_pred HhhcCCChhHHhhhcCccEEEeecCChhhhHhhccHHHHHhhchhHHHHHHHHHHHHHHHHHHhcCCCcccccccccccC
Q 003188 355 MDEEGLGWDEAWDITTRTVAYTNHTVLPEALEKWSQAVMWKLLPRHMEIIEEIDKRFIAMVRSTRSDLESKIPSMCILDN 434 (840)
Q Consensus 355 ~d~~~l~~~~A~~i~~~~~vfT~HT~~~eglE~w~~~l~~~lLPr~~~ii~~in~~f~~~~~~~~~~~~~~~~~~~iie~ 434 (840)
||++|++|++||++|+++|+||||||+|||+|+||++||+++||||+|||++||++|+..+...+|.+.+.+.+|+++++
T Consensus 237 ~de~gl~~~eA~eiv~~~~~fTnHT~vpealE~wp~~l~~~~Lpr~~~ii~ein~~f~~~~~~~~~~d~~~~~~l~ii~~ 316 (713)
T PF00343_consen 237 MDEEGLSWDEAWEIVRKTFAFTNHTPVPEALEKWPVDLFERYLPRHLEIIYEINRRFLDELRRKYPGDEDQIRRLSIIEE 316 (713)
T ss_dssp HHTT---HHHHHHHHHHHEEEEE--SSGGGS-EEEHHHHHHHSHHHHHHHHHHHHHHHHHHHHHSTT-HHHHHHHSSEET
T ss_pred HHHcCCCHHHHHHHHHhceeeeccccccccccccCHHHHHHHChHHHHHHHHHhHHHHHHHHHHhcCcchhhhhcccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred CCCCC-cccccccccccCCcccchhhhhHHHHHhhhhcCccccCCCCCcccccccCcccccccCChhhhHHHHhhcCccc
Q 003188 435 NPKKP-VVRMANLCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPRRWLRFCNPELSKIITKWLKTDQ 513 (840)
Q Consensus 435 ~~~~~-~v~Ma~lai~~S~~VNgVS~lH~eilk~~~f~~~~~l~p~k~~~iTNGI~~rrWl~~~NP~l~~li~~~~g~~~ 513 (840)
+.+ +||||+|||++||+|||||+||++++++++|++|++++|++|.|||||||+|||+..|||+|++||++++| ++
T Consensus 317 --~~~~~~~Ma~LAl~~S~~vNGVS~LH~ev~k~~~f~~f~~l~P~kf~nvTNGVh~rrWl~~~nP~L~~L~~~~iG-~~ 393 (713)
T PF00343_consen 317 --GNSKRFRMANLALRGSHSVNGVSKLHGEVLKQMVFKDFYELWPEKFGNVTNGVHPRRWLSQANPELSELITEYIG-DD 393 (713)
T ss_dssp --SSSCEEEHHHHHHHCESEEEESSHHHHHHHHHTTTHHHHHHSGGGEEE----B-TCCCCCCTSHHHHHHHHHHHT-SG
T ss_pred --cchhhcchhHHHHHhcccccchHHHHHHHHHHHHhhhhhhcCCceeeccccCccCcccccccCHHHHHHHHHHhc-cc
Confidence 333 99999999999999999999999999999999999999999999999999999999999999999999999 59
Q ss_pred cccChhhHhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCceEeecccchhhhhhhhhhhHHHHHHHHH
Q 003188 514 WVTNLDLLVGLRQFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKL 593 (840)
Q Consensus 514 w~~~~~~l~~l~~~~~d~~~~~~~~~~K~~nK~~L~~~i~~~~G~~~dp~~l~d~~vkR~heYKRq~Lnll~ii~~y~~i 593 (840)
|.+|++.|++|+++++|+.|+++|+++|++||.+|+++|+++.|+.+||+++||+|||||||||||+||+|+++++|.+|
T Consensus 394 W~~d~~~l~~l~~~~dd~~~~~~~~~vK~~~K~rl~~~i~~~~~~~ldp~slfdv~~rR~heYKRq~LniL~ii~~y~ri 473 (713)
T PF00343_consen 394 WRTDLEQLEKLEKFADDEEFQEELREVKQENKERLAEYIKKRTGVELDPDSLFDVQARRFHEYKRQLLNILHIIDRYNRI 473 (713)
T ss_dssp GGCSGGGGGGGGGGCCSHHHHHHHHHHHHHHHHHHHHHHHHHHSS---TTSEEEEEES-SCCCCTHHHHHHHHHHHHHHH
T ss_pred cccCHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCcchhhhhhhhhcccccccCcccccHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcCCCCcceEEEEcCCCHHHHhhhccCccccccCC
Q 003188 594 KEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHIS 673 (840)
Q Consensus 594 k~~~p~~~~~~~p~~~If~GKA~P~y~~aK~iIk~I~~la~~in~d~~~~~~lkVvFl~nYnvslA~~ii~gaDv~l~iS 673 (840)
++ +|+. ..+|+||||||||||+|.+||+|||+|+++|++||+||+++++|||||+|||||++|++|+||||||+|||
T Consensus 474 k~-~p~~--~~~Pv~~IFaGKAhP~d~~gK~iIk~I~~va~~in~Dp~v~~~lkVvFlenYdvslA~~lipg~DVwln~p 550 (713)
T PF00343_consen 474 KN-NPNK--KIRPVQFIFAGKAHPGDYMGKEIIKLINNVAEVINNDPEVGDRLKVVFLENYDVSLAEKLIPGVDVWLNIP 550 (713)
T ss_dssp HH-STTS--CCS-EEEEEE----TT-HHHHHHHHHHHHHHHHHCT-TTTCCGEEEEEETT-SHHHHHHHGGG-SEEEE--
T ss_pred Hh-cccC--CCCCeEEEEeccCCCCcHHHHHHHHHHHHHHHHHhcChhhccceeEEeecCCcHHHHHHHhhhhhhhhhCC
Confidence 98 7763 56899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccCCCcchhHHhhcCceEeeecCchhHHHHHHhcCcceEeecCccccchhhhhhccCCC---CCCChhHHHHHHHHh
Q 003188 674 TAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAVAEQVPKLRKEREDGL---FKPDPRFEEAKQFIR 750 (840)
Q Consensus 674 ~a~~EAsGTs~MKam~NGal~i~tlDGanvEi~~~vG~~N~~~fG~~~d~V~~~~~~~~y~~---~~~~~~l~~v~~~~~ 750 (840)
|||+||||||||||||||+|||||||||||||++++|+||+|+||+++|+|.+++++| |+| ++.+|+|++|+|.+.
T Consensus 551 ~~p~EASGTSgMK~~~NGaL~lstlDG~niEi~e~vG~eN~fiFG~~~~ev~~~~~~g-Y~~~~~y~~~~~l~~vld~i~ 629 (713)
T PF00343_consen 551 TRPKEASGTSGMKAAMNGALNLSTLDGWNIEIAEAVGEENIFIFGLTAEEVEELRKNG-YNPREYYENDPELKRVLDQII 629 (713)
T ss_dssp -TTSSSS-SHHHHHHHTT-EEEEESSTCHHHHHHHH-GGGSEEES-BHHHHHHHHHHT--HHHHHHHHSHHHHHHHHHHH
T ss_pred CCCccccCCCcchhhcCCCeEEecccchhHHHHHhcCCCcEEEcCCCHHHHHHHHhcC-CCcccccccCHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999999999999999999999887 887 477999999999999
Q ss_pred cCCCCC---CChHHHHHHHhhCCCCCCCccccccCChHHHHHHHHHHHHHhcCHHHHHHHHHHHhccCCCCChHHHHHHH
Q 003188 751 SGAFGS---YDYNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYKDQKKWLKMSILSTAGSGKFSSDRTIAQY 827 (840)
Q Consensus 751 ~G~f~~---~~~~~l~~~L~~~~~~~~~D~~~~~~Df~~y~~~~~~~~~~Y~d~~~W~~~~~~n~a~~g~FSsDrti~eY 827 (840)
+|+|++ ..|++|+++++.+ +|+|+|++||+||++||++|.++|+|+++|++|++.|||+||+|||||||+||
T Consensus 630 ~g~f~~~~~~~f~~i~~~~~~~-----~D~y~vl~Df~~Y~~~q~~v~~~Y~d~~~W~~~~i~Nia~~g~FssDrtI~~Y 704 (713)
T PF00343_consen 630 SGFFSPGDPDEFKPIYDSLLMY-----NDEYLVLADFESYVEAQEKVDKAYRDPKKWNKMSILNIARSGKFSSDRTIREY 704 (713)
T ss_dssp HTTTTTTSTTTTHHHHHHCHHH-----TTTT-HHHHHHHHHHHHHHHHHHHCSHHHHHHHHHHHHHCGGGGBHHHHHHHH
T ss_pred cCCCCCCCchhHHHHHhCcCCC-----CCcchhhhhHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhcCCCCchHHHHHH
Confidence 999977 3499999997656 89999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcccc
Q 003188 828 AKEIWNITE 836 (840)
Q Consensus 828 a~~iw~~~~ 836 (840)
|++||+++|
T Consensus 705 a~~IW~~~p 713 (713)
T PF00343_consen 705 AEDIWNVKP 713 (713)
T ss_dssp HHHTTTS--
T ss_pred HHHhhCCCC
Confidence 999999987
No 7
>COG0058 GlgP Glucan phosphorylase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=8.5e-199 Score=1708.50 Aligned_cols=738 Identities=47% Similarity=0.754 Sum_probs=696.8
Q ss_pred CHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCceEEEEEehhccccchhHHhhcc
Q 003188 28 EPSAIASNISYHVQYSPHFSPTKFEPEQAFFATAESVRDRLIQQWNETYHHFNKVDPKQTYYLSMEFLQGRTLTNAIGSL 107 (840)
Q Consensus 28 ~~~~~~~~~~~~l~~~~g~~~~~at~~~~y~ala~~vrd~l~~~w~~t~~~~~~~~~k~vyYlSmEfl~Gr~L~nnl~NL 107 (840)
+.++|+..|..++.+..|+++..||+++||.|++..||+++..+|.+|++.+.+.+.|+|||+|||||+||++.|||+||
T Consensus 5 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~w~~a~~~~v~~~~~~~~~~~~~~~~~~~~~~~yy~s~efL~grl~~~~l~n~ 84 (750)
T COG0058 5 RLEQLAYNLWWSLDTTAGKLFRDADPEDWYEALHNPVRELLAADWLRLNQLARDEDFKQVYYLSMEFLIGRLLGNNLWNL 84 (750)
T ss_pred cHHHHHHHHHHHHHHHhccChhhCCHHHHHHHhhHHHHHHHhcCHHHHHHhhcchhHHHHHHHHHHHHHHHhhhcchhhh
Confidence 56889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHhcCCChHHHHhhccccCCCCCCcccchhhhHhhhhccCCCeEEEeeccCCccceEEeeCCceeeccccc
Q 003188 108 DIQNAYADALNNLGHVLEEIAEQEKDAALGNGGLGRLASCFLDSMATLNLPAWGYGLRYRYGLFKQKITKQGQEEVAEDW 187 (840)
Q Consensus 108 g~~~~~~eaL~~lg~~~~~l~~~E~d~~LgnGGLGrLAac~ldS~a~l~~p~~G~GlrY~~G~F~Q~i~dG~Q~E~pd~W 187 (840)
|+++.++++|+++|++++|+.+.|+||++| ||||||||||||||||||+|++||||||+||||+|++.||||+|.||.|
T Consensus 85 g~~~~~~~~l~~~~~~~~e~~~~e~~p~lg-GGLGrLAgcfldS~a~Lg~P~~G~Gl~Y~~GyF~Q~~~dG~Q~E~p~~w 163 (750)
T COG0058 85 GIYDDVQEALKELGYFLMEFGEHESDPGLG-GGLGRLAGCFLDSAADLGLPLTGYGLRYRYGYFRQSDVDGWQVELPDEW 163 (750)
T ss_pred cchHHHHhhHHhhhccHHHHhhcccCcccc-ccHHHHHHhHHHHHHhcCCCceEEEeeecCCceeeeccCCceEecchhh
Confidence 999999999999999999999999999999 9999999999999999999999999999999999998899999999999
Q ss_pred cccCCCcccccCCeeEEEEECCeEEEcCCCceeeeCCeEEEEEEeeeccCCCCCCceEEEEEEEEEcCCCCccccccCcc
Q 003188 188 LEKFSPWEVVRHDVVFPVRFFGSVMVNPNGTRKWVGGEVVQAVAYDIPIPGYKTKNTISLRLWDAKASAEDFNLFQFNDG 267 (840)
Q Consensus 188 l~~~~pwe~~r~~~~~~V~f~g~~~~~~~g~~~w~~~~~v~av~yd~pi~gy~~~~~~~lrLw~a~v~~~~~~l~~~~~~ 267 (840)
+..|+|||+.|. .+ |+|||+||+||++ ++|++|||+++++..+|.|..+|.+
T Consensus 164 ~~~~~pwe~~r~------------------------~~---a~~~d~~V~g~~~-~~~~lrlW~a~~~~~~~~l~~~n~~ 215 (750)
T COG0058 164 LKYGNPWEFLRD------------------------AE---GVPYDVPVPGYDN-RVVTLRLWQAQVGRVPLYLLDFNVG 215 (750)
T ss_pred hccCCcceeecc------------------------cC---CceeeeeEEeccC-cEEEEEEEEEecCccceEeecCCCc
Confidence 999999998764 01 5899999999999 9999999999977657777667766
Q ss_pred hhhhhHhhhhhhccccccccCCCCchhhhhhhhhhhhHHHHhHHHHHHHHHHHcccCcccccCCCceEEEeCCCcccccH
Q 003188 268 QYESAAQLHSRAQQICAVLYPGDSTEEGKLLRLKQQFFLCSASLQDMILRFKERKSGRQWSEFPSKVAVQLNDTHPTLAI 347 (840)
Q Consensus 268 ~y~~a~~~~~~~~~It~~LYp~D~~~~Gk~lRL~Qeyfl~~a~lqdiir~~~~~~g~~~l~~l~~~~viHlNDtHpalai 347 (840)
+++..+|+||++|||+|+ ++|||+||||||+||+|+|+++++..++ +++.+ +.|||||||||++
T Consensus 216 ------e~~~~~~~iT~~LYp~Ds----~elRl~Qeyfl~~agvq~I~~~~~~~~~--~~~~~----~~~lNdtHpa~~i 279 (750)
T COG0058 216 ------ENKNDARNITRVLYPGDS----KELRLKQEYFLGSAGVQDILARGHLEHH--DLDVL----ADHLNDTHPALAI 279 (750)
T ss_pred ------ccchhhhhHHhhcCCCCc----HHHHHhhhheeeeHHHHHHHHHhhhccc--cccch----hhhhcCCChhHhH
Confidence 578899999999999998 8999999999999999999999555542 45544 5789999999999
Q ss_pred HHHHHHHHhhcCCChhHHhhhcCccEEEeecCChhhhHhhccHHHHHhhchhHHHHHHHHHHHHHHHHHHhcCCCccccc
Q 003188 348 PELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEALEKWSQAVMWKLLPRHMEIIEEIDKRFIAMVRSTRSDLESKIP 427 (840)
Q Consensus 348 pElmR~l~d~~~l~~~~A~~i~~~~~vfT~HT~~~eglE~w~~~l~~~lLPr~~~ii~~in~~f~~~~~~~~~~~~~~~~ 427 (840)
||+||+|+|++|++|++||++|+++|+||||||+|||+|+||++||+++||||++||++||.+|+.+++...+.+ ++.
T Consensus 280 ~ElmRll~d~~g~~~~~A~~~~~~~~~yTnHTplpeale~wp~~l~~~~lpr~~~ii~~in~~~l~~~~~~~~~~--~~~ 357 (750)
T COG0058 280 PELMRLLIDEEGLSWDEAWEIVRKTFVYTNHTPLPEALETWPVELFKKLLPRHLQIIYEINARFLPEVRLLYLGD--LIR 357 (750)
T ss_pred HHHHHHHHHHhcCCHHHHHHHHhheeeeecCCCchhhhccCCHHHHHHHhhhhhhhHHHHHhhhhHHHHhhcccc--ccc
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999887 677
Q ss_pred ccccccCCCCCCcccccccccccCCcccchhhhhHHHHHhhhhcCccccCCCCCcccccccCcccccccCChhhhHHHHh
Q 003188 428 SMCILDNNPKKPVVRMANLCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPRRWLRFCNPELSKIITK 507 (840)
Q Consensus 428 ~~~iie~~~~~~~v~Ma~lai~~S~~VNgVS~lH~eilk~~~f~~~~~l~p~k~~~iTNGI~~rrWl~~~NP~l~~li~~ 507 (840)
++++|++ ||||+||+++||+|||||+||+|+++++.|++|++++|.+|.|||||||+|||+..|||+|++++++
T Consensus 358 ~~~~i~~------v~Ma~lal~~S~~vNGVsklH~el~k~~~~~~~~~~~p~~i~nvTNGIt~rrWl~~~n~~L~~~~~~ 431 (750)
T COG0058 358 RGSPIEE------VNMAVLALVGSHSVNGVSKLHSELSKKMWFADFHGLYPEKINNVTNGITPRRWLAPANPGLADLLDE 431 (750)
T ss_pred cCCcccc------eehhhhhhhhhhhhHhHHHHHHHHHHHHHHHHhcccCccccccccCCcCCchhhhhhhHHHHHHHhh
Confidence 8888763 9999999999999999999999999999889999999999999999999999999999999999999
Q ss_pred hcCccccccChhhHhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCceEeecccchhhhhhhhhhhHHH
Q 003188 508 WLKTDQWVTNLDLLVGLRQFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAI 587 (840)
Q Consensus 508 ~~g~~~w~~~~~~l~~l~~~~~d~~~~~~~~~~K~~nK~~L~~~i~~~~G~~~dp~~l~d~~vkR~heYKRq~Lnll~ii 587 (840)
.+| +.|..+++.++++..+++|+.|++.++.+|.+||++|+++++++.|+.+||+++||||||||||||||+||+++++
T Consensus 432 ~ig-~~W~~~~~~l~~l~~~a~~~~~~e~i~~iK~~nk~~La~~i~~~~gi~~~p~~lfd~~~kRiheYKRq~Lnl~~i~ 510 (750)
T COG0058 432 KIG-DEWLNDLDILDELLWFADDKAFRELIAEIKRENKKRLAEEIADRTGIEVDPNALFDGQARRIHEYKRQLLNLLDIE 510 (750)
T ss_pred hhh-hhhhhhhhhhhHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhhhhcCCccCCCcceeeeehhhhhhhhhHHhHhhHH
Confidence 999 5999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcCCCCcceEEEEcCCCHHHHhhhccCcc
Q 003188 588 YRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSE 667 (840)
Q Consensus 588 ~~y~~ik~~~p~~~~~~~p~~~If~GKA~P~y~~aK~iIk~I~~la~~in~d~~~~~~lkVvFl~nYnvslA~~ii~gaD 667 (840)
++|..|++ | ..+|+|+||||||||+|+.||+|||+|+++|++||+ ++||||+|||||++|++||||||
T Consensus 511 ~ly~~i~~-d-----~~prv~~iFaGKAhP~y~~aK~iIk~I~~~a~~in~------~lkVvFl~nYdvslA~~iipa~D 578 (750)
T COG0058 511 RLYRILKE-D-----WVPRVQIIFAGKAHPADYAAKEIIKLINDVADVINN------KLKVVFLPNYDVSLAELLIPAAD 578 (750)
T ss_pred HHHHHHhc-C-----CCCceEEEEeccCCCcchHHHHHHHHHHHHHHhhcc------cceEEEeCCCChhHHHhhccccc
Confidence 99999984 2 223666699999999999999999999999999886 77999999999999999999999
Q ss_pred ccccCCCCCccCCCcchhHHhhcCceEeeecCchhHHHHHHhcCcceEeecCccccchhhhhhccCCC---CCCChhHHH
Q 003188 668 LSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAVAEQVPKLRKEREDGL---FKPDPRFEE 744 (840)
Q Consensus 668 v~l~iS~a~~EAsGTs~MKam~NGal~i~tlDGanvEi~~~vG~~N~~~fG~~~d~V~~~~~~~~y~~---~~~~~~l~~ 744 (840)
|||||||||+||||||||||||||+|||||||||||||++++|++|+|+||+++++|..+++++.|.. +..+++++.
T Consensus 579 vweqis~a~~EASGTsnMK~alNGaltigtlDGanvEi~e~vg~~N~~~fG~~~~~v~~~~~~~~~~~~~y~~~~~~v~~ 658 (750)
T COG0058 579 VWEQIPTAGKEASGTSNMKAALNGALTLGTLDGANVEIYEHVGGENGWIFGETVEEVDALRADGYDPNALYYELENEVKP 658 (750)
T ss_pred ccccCCCCCccccCcCcchHHhcCCceeeccccHHHHHHHhcCCCceEEeCCchhhHHHHHhcccccHHHHHHHhHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999887774443 366789999
Q ss_pred HHHHHhcCCCCCCC---hHHHHHHHhh-CCCCCCC-ccccccCChHHHHHHHHHHHHHhcCHHHHHHHHHHHhccCCCCC
Q 003188 745 AKQFIRSGAFGSYD---YNPLLDSLEG-NTGYGRG-DYFLVGYDFPSYLEAQDRVDQAYKDQKKWLKMSILSTAGSGKFS 819 (840)
Q Consensus 745 v~~~~~~G~f~~~~---~~~l~~~L~~-~~~~~~~-D~~~~~~Df~~y~~~~~~~~~~Y~d~~~W~~~~~~n~a~~g~FS 819 (840)
+++.+.+|.|++.. +++++++|.. . + |+||+++||.+|++||+++.+.|++++.|.++++.|+|.+|.||
T Consensus 659 ~~~~~~~~~~~p~~~~~~~~~~~sl~~~~-----~~dr~~~~yd~~~Y~~aq~~~~~~~~~~~~W~~~~i~nia~~g~fs 733 (750)
T COG0058 659 VLDEIIDGRFSPGWKSRFKNLIDSLLPKF-----GTDRMMVLYDFKAYVPAQEEVDALYRDQEAWTKKAILNIANSGLFS 733 (750)
T ss_pred HHHHHhcccCCcccHHHHHHHHHHhhhcc-----CccHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHcCCCC
Confidence 99999999998855 8889999974 3 5 99999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHhcccc
Q 003188 820 SDRTIAQYAKEIWNITE 836 (840)
Q Consensus 820 sDrti~eYa~~iw~~~~ 836 (840)
|||||++||.+||+++|
T Consensus 734 sDrtI~~Y~~~Iw~~~~ 750 (750)
T COG0058 734 SDRTIREYAGEIWHIGP 750 (750)
T ss_pred chhHHHHHHHHhhccCC
Confidence 99999999999999975
No 8
>cd04299 GT1_Glycogen_Phosphorylase_like This family is most closely related to the oligosaccharide phosphorylase domain family and other unidentified sequences. Oligosaccharide phosphorylase catalyzes the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The members of this family are found in bacteria and Archaea.
Probab=100.00 E-value=1.3e-134 Score=1196.59 Aligned_cols=574 Identities=26% Similarity=0.417 Sum_probs=500.9
Q ss_pred CceEEEEEehhccccchhHHhhccChHHHHHHHHHhcCCChHHHHhhccccCCCCCCcccchhhhHhhhhccCCCeEEEe
Q 003188 84 PKQTYYLSMEFLQGRTLTNAIGSLDIQNAYADALNNLGHVLEEIAEQEKDAALGNGGLGRLASCFLDSMATLNLPAWGYG 163 (840)
Q Consensus 84 ~k~vyYlSmEfl~Gr~L~nnl~NLg~~~~~~eaL~~lg~~~~~l~~~E~d~~LgnGGLGrLAac~ldS~a~l~~p~~G~G 163 (840)
.+.++||||||.+..+|+ +||||||||||||||||||||+|++|||
T Consensus 85 ~~~~aYFs~E~gl~~~lp----------------------------------iYsGGLG~LAgd~lksasdLg~P~vgvG 130 (778)
T cd04299 85 PLVAAYFSMEFGLHESLP----------------------------------IYSGGLGILAGDHLKAASDLGLPLVGVG 130 (778)
T ss_pred CCeeEEeccccccCCCCC----------------------------------ccCchHHHHHHHHHHHHHhCCCCEEEEE
Confidence 355669999999999997 9999999999999999999999999999
Q ss_pred eccCCccceEEee-CCceeeccccccccCCCcccccCCeeEEEEECCeEEEcCCCceeeeCCeEEEEEEeeeccCCCCCC
Q 003188 164 LRYRYGLFKQKIT-KQGQEEVAEDWLEKFSPWEVVRHDVVFPVRFFGSVMVNPNGTRKWVGGEVVQAVAYDIPIPGYKTK 242 (840)
Q Consensus 164 lrY~~G~F~Q~i~-dG~Q~E~pd~Wl~~~~pwe~~r~~~~~~V~f~g~~~~~~~g~~~w~~~~~v~av~yd~pi~gy~~~ 242 (840)
|+|+||||+|.|+ ||||+|.|+.|...+.||+..+ +.+|+ +.++ .+|++|+
T Consensus 131 llY~~GyF~Q~i~~dG~Q~e~~~~~~~~~~p~~~~~---------------~~~G~------~~~v----~v~l~g~--- 182 (778)
T cd04299 131 LLYRQGYFRQRLDADGWQQETYPVNDFEQLPLEPVR---------------DADGE------PVRV----SVELPGR--- 182 (778)
T ss_pred eCcCCCCeEEEECCCCceeecCCCcCCCCCceEEEe---------------cCCCC------eEEE----EEeeCCC---
Confidence 9999999999999 9999999999999999997521 23453 3333 3778897
Q ss_pred ceEEEEEEEEEcCCCCccccccCcchhhhhHhhhhhhccccccccCCCCchhhhhhhhhhhhHHHHhHHHHHHHHHHHcc
Q 003188 243 NTISLRLWDAKASAEDFNLFQFNDGQYESAAQLHSRAQQICAVLYPGDSTEEGKLLRLKQQFFLCSASLQDMILRFKERK 322 (840)
Q Consensus 243 ~~~~lrLw~a~v~~~~~~l~~~~~~~y~~a~~~~~~~~~It~~LYp~D~~~~Gk~lRL~Qeyfl~~a~lqdiir~~~~~~ 322 (840)
.+++|+|+++++ .+++|+|+++.+. |...+|.||++|||+| +++||+||+|||+||++.+ |+ .+
T Consensus 183 -~v~~rvw~~~vg--~v~lylLDtd~~~----n~~~~R~iT~~LYg~D-----~~~Rl~Qe~~Lg~agl~~L-r~---lg 246 (778)
T cd04299 183 -TVYARVWKAQVG--RVPLYLLDTDIPE----NSPDDRGITDRLYGGD-----QETRIQQEILLGIGGVRAL-RA---LG 246 (778)
T ss_pred -ceEEEEEEEEcC--CCCEEEecCCccc----cchhhcccccCCCCCc-----HHHHHHHHHHHHHHHHHHH-HH---hC
Confidence 679999999975 6999999999874 5778999999999987 4789999999999999875 33 22
Q ss_pred cCcccccCCCceEEEeCCCcccccHHHHHHHHHhhcCCChhHHhhhcCccEEEeecCChhhhHhhccHHHHHhhchhHHH
Q 003188 323 SGRQWSEFPSKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEALEKWSQAVMWKLLPRHME 402 (840)
Q Consensus 323 g~~~l~~l~~~~viHlNDtHpalaipElmR~l~d~~~l~~~~A~~i~~~~~vfT~HT~~~eglE~w~~~l~~~lLPr~~~ 402 (840)
.+|++||||||||||+++|+||++++++|++|++||++|+.+||||||||+|||+|+||.++++++||++++
T Consensus 247 --------~~pdViH~ND~Haal~~lE~~R~ll~~~g~~~~~A~e~vr~~tvFTtHTpvpqG~d~Fp~~l~~~~~~~~~~ 318 (778)
T cd04299 247 --------IKPTVYHMNEGHAAFLGLERIRELMAEGGLSFDEALEAVRASTVFTTHTPVPAGHDRFPPDLVERYFGPYAR 318 (778)
T ss_pred --------CCCeEEEeCCCcHHHHHHHHHHHHHHHcCCCHHHHHHhhCCeEEEecCCchHHHhhhCCHHHHHHHhhHHHH
Confidence 468999999999999999999999998899999999999999999999999999999999999999998764
Q ss_pred HHHHHHHHHHHHHHHhcCCCcccccccccccCCCCCCcccccccccccCCcccchhhhhHHHHHhhhhcCccccCCCC--
Q 003188 403 IIEEIDKRFIAMVRSTRSDLESKIPSMCILDNNPKKPVVRMANLCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNK-- 480 (840)
Q Consensus 403 ii~~in~~f~~~~~~~~~~~~~~~~~~~iie~~~~~~~v~Ma~lai~~S~~VNgVS~lH~eilk~~~f~~~~~l~p~k-- 480 (840)
.++++++.+..+++......+++|||+++||++|++|||||+||++++++ +|++|+..+|.+
T Consensus 319 ---------------~lgl~~~~~~~lg~e~~~~~~~~~nM~~laL~~S~~vNgVS~lHg~vsr~-mf~~~~~g~p~~~~ 382 (778)
T cd04299 319 ---------------ELGLSRDRFLALGRENPGDDPEPFNMAVLALRLAQRANGVSRLHGEVSRE-MFAGLWPGFPVEEV 382 (778)
T ss_pred ---------------HcCCCHHHHhhhccccccCccCceeHHHHHHHhcCeeeeecHHHHHHHHH-HhhhhhccCCcccC
Confidence 46888888888887542001247999999999999999999999999996 898888887765
Q ss_pred -CcccccccCcccccccCChhhhHHHHhhcCccccccChhhHhhh--hccCCCHHHHHHHHHHHHHHHHHHHHHHHHHh-
Q 003188 481 -LQNKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLLVGL--RQFADNTELQAEWESAKMASKKHLADYIWRVT- 556 (840)
Q Consensus 481 -~~~iTNGI~~rrWl~~~NP~l~~li~~~~g~~~w~~~~~~l~~l--~~~~~d~~~~~~~~~~K~~nK~~L~~~i~~~~- 556 (840)
|.+||||||+++|+ ||+++++|++++| ++|.++++....+ ...++|.++ | ++|++||++|+++|++++
T Consensus 383 ~i~~ITNGVh~~~W~---~P~~~~l~~~~~g-~~w~~~~~~~~~~~~~~~i~d~~l---w-~~K~~~K~~L~~~v~~~~~ 454 (778)
T cd04299 383 PIGHVTNGVHVPTWV---APEMRELYDRYLG-GDWRERPTDPELWEAVDDIPDEEL---W-EVRQQLRRRLIEFVRRRLR 454 (778)
T ss_pred ceeceeCCcchhhhc---CHHHHHHHHHhcC-cchhhccchHHHHhhhcCCCcHHH---H-HHHHHHHHHHHHHHHHHHH
Confidence 99999999999997 7999999999999 5999888754333 334677766 7 799999999999998876
Q ss_pred ----------------CCCCCCCCceEeecccchhhhhhhhhhhHHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCH
Q 003188 557 ----------------GVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYT 620 (840)
Q Consensus 557 ----------------G~~~dp~~l~d~~vkR~heYKRq~Lnll~ii~~y~~ik~~~p~~~~~~~p~~~If~GKA~P~y~ 620 (840)
|..+||++|||+||||||+|||++| +|++++||.+|+. ||. .|+||||+|||||+|+
T Consensus 455 ~~~~~~g~~~~~~~~~~~~ldpd~ltigfarRfa~YKR~~L-il~dl~rl~~il~-~~~-----~pvQ~IfaGKAhP~d~ 527 (778)
T cd04299 455 RQWLRRGASAEEIGEADDVLDPNVLTIGFARRFATYKRATL-LLRDPERLKRLLN-DPE-----RPVQFIFAGKAHPADE 527 (778)
T ss_pred hhhhhcCCchhhhhhcCCccCCCccEEeeeecchhhhhHHH-HHHHHHHHHHHhh-CCC-----CCeEEEEEEecCccch
Confidence 5669999999999999999999999 9999999999986 543 4999999999999999
Q ss_pred HHHHHHHHHHHHHhhhcCCcCCCCcceEEEEcCCCHHHHhhhccCccccccCCCCCccCCCcchhHHhhcCceEeeecCc
Q 003188 621 NAKRIVKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDG 700 (840)
Q Consensus 621 ~aK~iIk~I~~la~~in~d~~~~~~lkVvFl~nYnvslA~~ii~gaDv~l~iS~a~~EAsGTs~MKam~NGal~i~tlDG 700 (840)
.||++||.|+++++ ||++++ ||||+||||+++||+|+||||||||||+||+||||||||||||||+|++||+||
T Consensus 528 ~gK~iIk~i~~~a~----~p~~~~--kVvfle~Yd~~lA~~LvaG~DvwLn~prrp~EAsGTSgMKA~~NG~LnlSvlDG 601 (778)
T cd04299 528 PGKELIQEIVEFSR----RPEFRG--RIVFLEDYDMALARHLVQGVDVWLNTPRRPLEASGTSGMKAALNGGLNLSVLDG 601 (778)
T ss_pred HHHHHHHHHHHHHh----CcCCCC--cEEEEcCCCHHHHHHHHhhhhhcccCCCCCCCCCccchHHHHHcCCeeeecccC
Confidence 99999999999996 899999 999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHhcCcceEeecCccccchhhhhhccCCCCCCChhHHHHHHHHhcCCCCCCChHHHHHHHhhCCCCCCCccccc
Q 003188 701 ANVEIRQEIGEENFFLFGAVAEQVPKLRKEREDGLFKPDPRFEEAKQFIRSGAFGSYDYNPLLDSLEGNTGYGRGDYFLV 780 (840)
Q Consensus 701 anvEi~~~vG~~N~~~fG~~~d~V~~~~~~~~y~~~~~~~~l~~v~~~~~~G~f~~~~~~~l~~~L~~~~~~~~~D~~~~ 780 (840)
||.|.. .+.|+|.||..... .+.. . -+..++++||+.|.+
T Consensus 602 ww~E~~---~g~nGwaig~~~~~-~~~~---------------------~---~d~~da~~Ly~~Le~------------ 641 (778)
T cd04299 602 WWDEGY---DGENGWAIGDGDEY-EDDE---------------------Y---QDAEEAEALYDLLEN------------ 641 (778)
T ss_pred cccccc---CCCCceEeCCCccc-cChh---------------------h---cchhhHHHHHHHHHH------------
Confidence 998876 46899999995421 1100 0 012358999999973
Q ss_pred cCChHHHHHHHHHHHHH-hcC-----HHHHHHHHHHHhccCC-CCChHHHHHHHHHHHh
Q 003188 781 GYDFPSYLEAQDRVDQA-YKD-----QKKWLKMSILSTAGSG-KFSSDRTIAQYAKEIW 832 (840)
Q Consensus 781 ~~Df~~y~~~~~~~~~~-Y~d-----~~~W~~~~~~n~a~~g-~FSsDrti~eYa~~iw 832 (840)
.|... |.. +++|.+||+++|+..+ +|||+||++||.++.|
T Consensus 642 ------------~i~p~yy~r~~~g~p~~W~~~~k~sm~~~~p~fs~~Rmv~eY~~~~Y 688 (778)
T cd04299 642 ------------EVIPLFYDRDEGGYPPGWVAMMKHSMATLGPRFSAERMVREYVERFY 688 (778)
T ss_pred ------------HHHHHHhcCCCCCCCHHHHHHHHHHHHhcccCCCHHHHHHHHHHHhH
Confidence 56645 543 7899999999999864 9999999999999998
No 9
>TIGR02094 more_P_ylases alpha-glucan phosphorylases. This family consists of known phosphorylases, and homologs believed to share the function of using inorganic phosphate to cleave an alpha 1,4 linkage between the terminal glucose residue and the rest of the polymer (maltodextrin, glycogen, etc.). The name of the glucose storage polymer substrate, and therefore the name of this enzyme, depends on the chain lengths and branching patterns. A number of the members of this family have been shown to operate on small maltodextrins, as may be obtained by utilization of exogenous sources. This family represents a distinct clade from the related family modeled by TIGR02093/PF00343.
Probab=100.00 E-value=1.2e-133 Score=1169.67 Aligned_cols=571 Identities=25% Similarity=0.413 Sum_probs=498.0
Q ss_pred EEEEEehhccccchhHHhhccChHHHHHHHHHhcCCChHHHHhhccccCCCCCCcccchhhhHhhhhccCCCeEEEeecc
Q 003188 87 TYYLSMEFLQGRTLTNAIGSLDIQNAYADALNNLGHVLEEIAEQEKDAALGNGGLGRLASCFLDSMATLNLPAWGYGLRY 166 (840)
Q Consensus 87 vyYlSmEfl~Gr~L~nnl~NLg~~~~~~eaL~~lg~~~~~l~~~E~d~~LgnGGLGrLAac~ldS~a~l~~p~~G~GlrY 166 (840)
|+||||||.+..+|+ +||||||||||||||||||||+|++||||+|
T Consensus 1 ~ayf~~E~g~~~~~p----------------------------------~ysGGLG~LAgd~l~saa~l~~p~~g~gl~Y 46 (601)
T TIGR02094 1 VAYFSMEYGLHESLP----------------------------------IYSGGLGVLAGDHLKSASDLGLPLVAVGLLY 46 (601)
T ss_pred CeEEeeccccCCCCC----------------------------------ccCchHHHHHHHHHHHHHhCCCCeEEEEecc
Confidence 689999999999997 9999999999999999999999999999999
Q ss_pred CCccceEEee-CCceeeccccccccCCCcccccCCeeEEEEECCeEEEcCCCceeeeCCeEEEEEEeeeccCCCCCCceE
Q 003188 167 RYGLFKQKIT-KQGQEEVAEDWLEKFSPWEVVRHDVVFPVRFFGSVMVNPNGTRKWVGGEVVQAVAYDIPIPGYKTKNTI 245 (840)
Q Consensus 167 ~~G~F~Q~i~-dG~Q~E~pd~Wl~~~~pwe~~r~~~~~~V~f~g~~~~~~~g~~~w~~~~~v~av~yd~pi~gy~~~~~~ 245 (840)
+||||+|+|+ ||||+|.|++|+..+.||+.. ...+|+ . ++|++||+| .++
T Consensus 47 ~~Gyf~Q~i~~~g~Q~e~~~~~~~~~~p~~~~---------------~~~~g~-------~---~~~~v~i~g----~~~ 97 (601)
T TIGR02094 47 KQGYFRQRLDEDGWQQEAYPNNDFESLPIEKV---------------LDTDGK-------W---LKISVRIRG----RDV 97 (601)
T ss_pred CCCceeEEECCCCceeecCCccccCCCceEEE---------------ecCCCC-------e---EEEEEecCC----cEE
Confidence 9999999998 999999999999999999861 123454 2 589999999 489
Q ss_pred EEEEEEEEcCCCCccccccCcchhhhhHhhhhhhccccccccCCCCchhhhhhhhhhhhHHHHhHHHHHHHHHHHcccCc
Q 003188 246 SLRLWDAKASAEDFNLFQFNDGQYESAAQLHSRAQQICAVLYPGDSTEEGKLLRLKQQFFLCSASLQDMILRFKERKSGR 325 (840)
Q Consensus 246 ~lrLw~a~v~~~~~~l~~~~~~~y~~a~~~~~~~~~It~~LYp~D~~~~Gk~lRL~Qeyfl~~a~lqdiir~~~~~~g~~ 325 (840)
++|+|+++++ .+++|+|+++. ++|...+|.||++|||+| +++|++||+|||+|++|++ + +.+
T Consensus 98 ~~rlw~~~~~--~v~lylld~~~----~~n~~~~R~it~~LY~~D-----~~~R~~Qe~fl~~a~l~~l-~---~l~--- 159 (601)
T TIGR02094 98 YAKVWRVQVG--RVPLYLLDTNI----PENSEDDRWITGRLYGGD-----KEMRIAQEIVLGIGGVRAL-R---ALG--- 159 (601)
T ss_pred EEEEEEEEeC--CCCEEEecCCC----cccchhhcCccCCCCCCC-----HHHHHHHHHHHHHHHHHHH-H---HcC---
Confidence 9999999964 68999999886 456788999999999988 5789999999999999986 1 222
Q ss_pred ccccCCCceEEEeCCCcccccHHHHHHHHHhhcCCChhHHhhhcCccEEEeecCChhhhHhhccHHHHHhhchhHHHHHH
Q 003188 326 QWSEFPSKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEALEKWSQAVMWKLLPRHMEIIE 405 (840)
Q Consensus 326 ~l~~l~~~~viHlNDtHpalaipElmR~l~d~~~l~~~~A~~i~~~~~vfT~HT~~~eglE~w~~~l~~~lLPr~~~ii~ 405 (840)
.+|++||||||||||+++||||+++ +++++|++||++|+.+|+||||||+|||+|+||.+++.++||+ ++++.
T Consensus 160 -----~~pdviH~ND~Htal~~~el~r~l~-~~~~~~~~a~~~~~~~~vfTiHt~~~qG~e~f~~~~~~~~~~~-~~~~~ 232 (601)
T TIGR02094 160 -----IDPDVYHLNEGHAAFVTLERIRELI-AQGLSFEEAWEAVRKSSLFTTHTPVPAGHDVFPEDLMRKYFGD-YAANL 232 (601)
T ss_pred -----CCceEEEeCCchHHHHHHHHHHHHH-HcCCCHHHHHHhcCCeEEEeCCCchHHHhhhcCHHHHHHHhhh-hhhHh
Confidence 5899999999999999999999999 7899999999999999999999999999999999999999998 46666
Q ss_pred HHHHHHHHHHHHhcCCCcccccccccccCCCCCCcccccccccccCCcccchhhhhHHHHHhhhhcCccccCCCC---Cc
Q 003188 406 EIDKRFIAMVRSTRSDLESKIPSMCILDNNPKKPVVRMANLCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNK---LQ 482 (840)
Q Consensus 406 ~in~~f~~~~~~~~~~~~~~~~~~~iie~~~~~~~v~Ma~lai~~S~~VNgVS~lH~eilk~~~f~~~~~l~p~k---~~ 482 (840)
+|+.+++..+...++ + .+++|||+++||++|++|||||++|+++++ .+|++|++++|.+ |.
T Consensus 233 gl~~~~~~~~~~~~~------------~---~~~~vnm~~lai~~S~~vngVS~lh~~v~~-~l~~~l~~~~~~~~~~i~ 296 (601)
T TIGR02094 233 GLPREQLLALGRENP------------D---DPEPFNMTVLALRLSRIANGVSKLHGEVSR-KMWQFLYPGYEEEEVPIG 296 (601)
T ss_pred CCCHHHHHhhhhhcc------------C---ccCceeHHHHHHHhCCeeeeecHHHHHHHH-HHHHhhhhhcccccCCcc
Confidence 777665544322221 0 124899999999999999999999999998 6899999998877 99
Q ss_pred ccccccCcccccccCChhhhHHHHhhcCccccccChhhHhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCC---
Q 003188 483 NKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLLVGLRQFADNTELQAEWESAKMASKKHLADYIWRVTGVT--- 559 (840)
Q Consensus 483 ~iTNGI~~rrWl~~~NP~l~~li~~~~g~~~w~~~~~~l~~l~~~~~d~~~~~~~~~~K~~nK~~L~~~i~~~~G~~--- 559 (840)
|||||||+++|. ||.+..++.++.+ ++|.+++++++.|.++ |....+++.++|++||++|+++|++++|+.
T Consensus 297 gItNGId~~~W~---~~~~~~l~~~y~~-~~w~~~~~~~~~~~~~--~~~~~~~l~~~K~~~K~~L~~~v~~~~~~~~~~ 370 (601)
T TIGR02094 297 YVTNGVHNPTWV---APELRDLYERYLG-ENWRELLADEELWEAI--DDIPDEELWEVHLKLKARLIDYIRRRLRERWLR 370 (601)
T ss_pred ceeCCccccccC---CHHHHHHHHHhCC-cchhccchhhhhhhhc--ccccHHHHHHHHHHHHHHHHHHHHHHhhhhhhh
Confidence 999999999996 7888888899998 5899999999888875 333445555899999999999999977765
Q ss_pred --------------CCCCCceEeecccchhhhhhhhhhhHHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHH
Q 003188 560 --------------IDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRI 625 (840)
Q Consensus 560 --------------~dp~~l~d~~vkR~heYKRq~Lnll~ii~~y~~ik~~~p~~~~~~~p~~~If~GKA~P~y~~aK~i 625 (840)
+||++|||+||||||+|||++| |++++++|.+|+. ||. .|+||||+|||||+|.+||++
T Consensus 371 ~g~~~~~~~~~gl~~dpd~~~ig~v~Rl~~yKr~dL-il~~i~~l~~i~~-~~~-----~pvq~V~~Gka~p~d~~gk~~ 443 (601)
T TIGR02094 371 RGADAAILMATDRFLDPDVLTIGFARRFATYKRADL-IFRDLERLARILN-NPE-----RPVQIVFAGKAHPADGEGKEI 443 (601)
T ss_pred ccCcchhhhhhccccCCCCcEEEEEEcchhhhhHHH-HHHHHHHHHHHhh-CCC-----CCeEEEEEEecCcccchHHHH
Confidence 9999999999999999999999 9999999999986 554 499999999999999999999
Q ss_pred HHHHHHHHhhhcCCcCCCCcceEEEEcCCCHHHHhhhccCccccccCCCCCccCCCcchhHHhhcCceEeeecCchhHHH
Q 003188 626 VKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEI 705 (840)
Q Consensus 626 Ik~I~~la~~in~d~~~~~~lkVvFl~nYnvslA~~ii~gaDv~l~iS~a~~EAsGTs~MKam~NGal~i~tlDGanvEi 705 (840)
|++|+++|+ ||++++ ||+|++|||+++||+|+||||||||||++|+|||||||||||+||+|++||+||||+|.
T Consensus 444 i~~i~~la~----~~~~~~--kv~f~~~Yd~~lA~~i~aG~Dv~L~~Psr~~EacGtsqMka~~nGgL~~sv~DG~~~E~ 517 (601)
T TIGR02094 444 IQRIVEFSK----RPEFRG--RIVFLENYDINLARYLVSGVDVWLNNPRRPLEASGTSGMKAAMNGVLNLSILDGWWGEG 517 (601)
T ss_pred HHHHHHHHh----cccCCC--CEEEEcCCCHHHHHHHhhhheeEEeCCCCCcCCchHHHHHHHHcCCceeecccCccccc
Confidence 999999996 899999 99999999999999999999999999999999999999999999999999999999886
Q ss_pred HHHhcCcceEeecCccccchhhhhhccCCCCCCChhHHHHHHHHhcCCCCCCChHHHHHHHhhCCCCCCCccccccCChH
Q 003188 706 RQEIGEENFFLFGAVAEQVPKLRKEREDGLFKPDPRFEEAKQFIRSGAFGSYDYNPLLDSLEGNTGYGRGDYFLVGYDFP 785 (840)
Q Consensus 706 ~~~vG~~N~~~fG~~~d~V~~~~~~~~y~~~~~~~~l~~v~~~~~~G~f~~~~~~~l~~~L~~~~~~~~~D~~~~~~Df~ 785 (840)
. ++.|+|.||...+.... ..-+..+.++||+.|..
T Consensus 518 ~---~~~nGf~f~~~~~~~~~-------------------------~~~d~~da~~l~~~L~~----------------- 552 (601)
T TIGR02094 518 Y---DGDNGWAIGDGEEYDDE-------------------------EEQDRLDAEALYDLLEN----------------- 552 (601)
T ss_pred C---CCCcEEEECCCcccccc-------------------------ccccCCCHHHHHHHHHH-----------------
Confidence 5 45799999985432110 01134568999999971
Q ss_pred HHHHHHHHHHHHhcC------HHHHHHHHHHHhccCC-CCChHHHHHHHHHHHh
Q 003188 786 SYLEAQDRVDQAYKD------QKKWLKMSILSTAGSG-KFSSDRTIAQYAKEIW 832 (840)
Q Consensus 786 ~y~~~~~~~~~~Y~d------~~~W~~~~~~n~a~~g-~FSsDrti~eYa~~iw 832 (840)
.+..+|.+ |+.|.++++++|+..+ +|||+||+++|.+..|
T Consensus 553 -------ai~~~yy~~~~~~~p~~W~~~~k~am~~~~~~fsw~r~a~~Y~~~yy 599 (601)
T TIGR02094 553 -------EVIPLYYDRDEKGIPADWVEMMKESIATIAPRFSTNRMVREYVDKFY 599 (601)
T ss_pred -------HHHHHHhcCCcccCcHHHHHHHHHHHhccCCCCCHHHHHHHHHHHhC
Confidence 34366643 6679999999999864 8999999999999876
No 10
>COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=9.7e-48 Score=437.35 Aligned_cols=383 Identities=20% Similarity=0.214 Sum_probs=313.9
Q ss_pred ccccccCcchhhhhHhhhhhhccccccccCC-CCchhhhhhhhhhhhHHHHhHHHHHHHHHHHcccCcccccCCCceEEE
Q 003188 259 FNLFQFNDGQYESAAQLHSRAQQICAVLYPG-DSTEEGKLLRLKQQFFLCSASLQDMILRFKERKSGRQWSEFPSKVAVQ 337 (840)
Q Consensus 259 ~~l~~~~~~~y~~a~~~~~~~~~It~~LYp~-D~~~~Gk~lRL~Qeyfl~~a~lqdiir~~~~~~g~~~l~~l~~~~viH 337 (840)
+++++++++.+++- . -..+|+. |+.+ ++.||+.|+++.+ ..+ ... +.|++||
T Consensus 83 v~~~lid~~~~f~r----~-----~~~~~~~~d~~~--------Rf~~F~~a~~~~~-----~~~----~~~-~~pDIvH 135 (487)
T COG0297 83 VDLYLIDNPALFKR----P-----DSTLYGYYDNAE--------RFAFFSLAAAELA-----PLG----LIS-WLPDIVH 135 (487)
T ss_pred CcEEEecChhhcCc----c-----ccccCCCCcHHH--------HHHHHHHHHHHHh-----hhc----CCC-CCCCEEE
Confidence 66777777777651 0 1345553 4433 8889999998753 111 112 6899999
Q ss_pred eCCCcccccHHHHHHHHHhhcCCChhHHhhhcCccEEEeecCChhhhHhhccHHHHHhh-chhHHHHHHHHHHHHHHHHH
Q 003188 338 LNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEALEKWSQAVMWKL-LPRHMEIIEEIDKRFIAMVR 416 (840)
Q Consensus 338 lNDtHpalaipElmR~l~d~~~l~~~~A~~i~~~~~vfT~HT~~~eglE~w~~~l~~~l-LPr~~~ii~~in~~f~~~~~ 416 (840)
+||||+||+ |.+|+... . ......+|||+||+..||+ |+...++.+ ||...
T Consensus 136 ~hDWqt~L~-~~~lk~~~--~--------~~~~i~tVfTIHNl~~qG~--~~~~~~~~lgLp~~~--------------- 187 (487)
T COG0297 136 AHDWQTGLL-PAYLKQRY--R--------SGYIIPTVFTIHNLAYQGL--FRLQYLEELGLPFEA--------------- 187 (487)
T ss_pred eecHHHHHH-HHHHhhcc--c--------ccccCCeEEEEeeceeecc--cchhhHHHhcCCHHH---------------
Confidence 999999997 78888642 0 1134569999999999999 886666655 66432
Q ss_pred HhcCCCcccccccccccCCCCCCcccccccccccCCcccchhhhhHHHHHhhhhc-Ccccc---CCCCCcccccccCccc
Q 003188 417 STRSDLESKIPSMCILDNNPKKPVVRMANLCVVSAHTVNGVAQLHSDILKADLFA-DYVSL---WPNKLQNKTNGITPRR 492 (840)
Q Consensus 417 ~~~~~~~~~~~~~~iie~~~~~~~v~Ma~lai~~S~~VNgVS~lH~eilk~~~f~-~~~~l---~p~k~~~iTNGI~~rr 492 (840)
+. +-..+. ++++++++.||..|+.||+||++|++++.++.|+ ++.++ ...++++|.||||.-.
T Consensus 188 ---------~~-~~~l~~---~~~~~~lK~gi~~ad~vttVSptYa~Ei~t~~~g~gl~g~l~~~~~~l~GI~NgiD~~~ 254 (487)
T COG0297 188 ---------YA-SFGLEF---YGQISFLKGGLYYADAVTTVSPTYAGEIYTPEYGEGLEGLLSWRSGKLSGILNGIDYDL 254 (487)
T ss_pred ---------hh-hceeee---cCcchhhhhhheeccEEEEECHHHHHhhccccccccchhhhhhccccEEEEEeeEEecc
Confidence 11 111121 3479999999999999999999999999988887 66665 4688999999999999
Q ss_pred ccccCChhhhHHHHhhcCccccccChhhHhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCceEeeccc
Q 003188 493 WLRFCNPELSKIITKWLKTDQWVTNLDLLVGLRQFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQVKR 572 (840)
Q Consensus 493 Wl~~~NP~l~~li~~~~g~~~w~~~~~~l~~l~~~~~d~~~~~~~~~~K~~nK~~L~~~i~~~~G~~~dp~~l~d~~vkR 572 (840)
| ||+.+.++..++. +++ + ..|.+||..|. +++|++.+.+.|+.++|.|
T Consensus 255 w----np~~d~~~~~~y~-----------------~~~------~-~~k~~nk~~L~----~~~gL~~~~~~pl~~~vsR 302 (487)
T COG0297 255 W----NPETDPYIAANYS-----------------AEV------L-PAKAENKVALQ----ERLGLDVDLPGPLFGFVSR 302 (487)
T ss_pred c----CcccccchhccCC-----------------ccc------h-hhhHHHHHHHH----HHhCCCCCCCCcEEEEeec
Confidence 9 9999999987776 344 5 35999999998 4999999999999999999
Q ss_pred chhhhhhhhhhhHHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcCCCCcceEEEEc
Q 003188 573 IHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYLKVVFVP 652 (840)
Q Consensus 573 ~heYKRq~Lnll~ii~~y~~ik~~~p~~~~~~~p~~~If~GKA~P~y~~aK~iIk~I~~la~~in~d~~~~~~lkVvFl~ 652 (840)
|++||+.+| ++.+++.+.+ . ..|+|+.|+|.|.++.+ +..+++. +++ +|.+..
T Consensus 303 l~~QKG~dl-~~~~i~~~l~--~----------~~~~vilG~gd~~le~~------~~~la~~------~~~--~~~~~i 355 (487)
T COG0297 303 LTAQKGLDL-LLEAIDELLE--Q----------GWQLVLLGTGDPELEEA------LRALASR------HPG--RVLVVI 355 (487)
T ss_pred cccccchhH-HHHHHHHHHH--h----------CceEEEEecCcHHHHHH------HHHHHHh------cCc--eEEEEe
Confidence 999999999 9999999876 2 47999999999999986 7899985 677 999999
Q ss_pred CCCHHHHhhhccCccccccCCCCCccCCCcchhHHhhcCceEeeecCchhHHHHHHhcCcceEeecCccccchhhhhhcc
Q 003188 653 NYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAVAEQVPKLRKERE 732 (840)
Q Consensus 653 nYnvslA~~ii~gaDv~l~iS~a~~EAsGTs~MKam~NGal~i~tlDGanvEi~~~vG~~N~~~fG~~~d~V~~~~~~~~ 732 (840)
.|++.+||+|++|||+|+|||+ +||||++||.+|++|+||| ++++|| ++|||.+.+
T Consensus 356 ~~~~~la~~i~agaD~~lmPSr--fEPcGL~ql~amryGtvpI----------v~~tGG--------LadTV~~~~---- 411 (487)
T COG0297 356 GYDEPLAHLIYAGADVILMPSR--FEPCGLTQLYAMRYGTLPI----------VRETGG--------LADTVVDRN---- 411 (487)
T ss_pred eecHHHHHHHHhcCCEEEeCCc--CcCCcHHHHHHHHcCCcce----------EcccCC--------ccceecCcc----
Confidence 9999999999999999999999 9999999999999999999 889999 999999753
Q ss_pred CCCCCCChhHHHHHHHHhcCC-CCCCChHHHHHHHhhCCCCCCCccccccCChHHHHHHHHHHHHHhcCHHH-HHHHHHH
Q 003188 733 DGLFKPDPRFEEAKQFIRSGA-FGSYDYNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYKDQKK-WLKMSIL 810 (840)
Q Consensus 733 y~~~~~~~~l~~v~~~~~~G~-f~~~~~~~l~~~L~~~~~~~~~D~~~~~~Df~~y~~~~~~~~~~Y~d~~~-W~~~~~~ 810 (840)
++. ....++|+ |.+.+.+++..+|. ++...|.++.. |.+++..
T Consensus 412 --~~~--------~~~~gtGf~f~~~~~~~l~~al~-------------------------rA~~~y~~~~~~w~~~~~~ 456 (487)
T COG0297 412 --EWL--------IQGVGTGFLFLQTNPDHLANALR-------------------------RALVLYRAPPLLWRKVQPN 456 (487)
T ss_pred --chh--------ccCceeEEEEecCCHHHHHHHHH-------------------------HHHHHhhCCHHHHHHHHHh
Confidence 221 12468885 87879999999997 99999988777 9999999
Q ss_pred HhccCCCCChHHHHHHHHH
Q 003188 811 STAGSGKFSSDRTIAQYAK 829 (840)
Q Consensus 811 n~a~~g~FSsDrti~eYa~ 829 (840)
.|.. +||||.|+.+|.+
T Consensus 457 ~m~~--d~sw~~sa~~y~~ 473 (487)
T COG0297 457 AMGA--DFSWDLSAKEYVE 473 (487)
T ss_pred hccc--ccCchhHHHHHHH
Confidence 9984 9999999999976
No 11
>PLN02939 transferase, transferring glycosyl groups
Probab=100.00 E-value=5.8e-44 Score=425.57 Aligned_cols=502 Identities=16% Similarity=0.202 Sum_probs=359.6
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCceEEEEEehhccccchhHHhhccChHHHHHHHHHhcCCChHHHHhh
Q 003188 51 FEPEQAFFATAESVRDRLIQQWNETYHHFNKVDPKQTYYLSMEFLQGRTLTNAIGSLDIQNAYADALNNLGHVLEEIAEQ 130 (840)
Q Consensus 51 at~~~~y~ala~~vrd~l~~~w~~t~~~~~~~~~k~vyYlSmEfl~Gr~L~nnl~NLg~~~~~~eaL~~lg~~~~~l~~~ 130 (840)
....+.|..+...=-..+.......... ......+|-++|.|..
T Consensus 449 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~mkILfVasE~a----------------------------------- 492 (977)
T PLN02939 449 GRIREAYLSCKGKNEREAVENFLKLTLS-GTSSGLHIVHIAAEMA----------------------------------- 492 (977)
T ss_pred hhHHHHHHHHhcCchHHHHHHHHHhccC-CCCCCCEEEEEEcccc-----------------------------------
Confidence 3445556555554444444444444332 2234578999999872
Q ss_pred ccccCCCCCCcccchhhhHhhhhccCCCeEEEeeccCCccceEEeeCCceeeccccccccCCCcccccCCeeEEEEECCe
Q 003188 131 EKDAALGNGGLGRLASCFLDSMATLNLPAWGYGLRYRYGLFKQKITKQGQEEVAEDWLEKFSPWEVVRHDVVFPVRFFGS 210 (840)
Q Consensus 131 E~d~~LgnGGLGrLAac~ldS~a~l~~p~~G~GlrY~~G~F~Q~i~dG~Q~E~pd~Wl~~~~pwe~~r~~~~~~V~f~g~ 210 (840)
|-.=.||||--++..=++++.+|.-+.-+--+|. ++..+.+.+ .+..+..+.+.|
T Consensus 493 ---P~aKtGGLaDVv~sLPkAL~~~GhdV~VIlP~Y~-~i~~~~~~~------------------~~~~~~~~~~~~--- 547 (977)
T PLN02939 493 ---PVAKVGGLADVVSGLGKALQKKGHLVEIVLPKYD-CMQYDQIRN------------------LKVLDVVVESYF--- 547 (977)
T ss_pred ---cccccccHHHHHHHHHHHHHHcCCeEEEEeCCCc-ccChhhhhc------------------ccccceEEEEee---
Confidence 2234899999999999999999998888877776 332211100 000000001111
Q ss_pred EEEcCCCceeeeCCeEEEEEEeeeccCCCCCCceEEEEEEEEEcCCCCccccccCcc---hhhhhHhhhhhhcccccccc
Q 003188 211 VMVNPNGTRKWVGGEVVQAVAYDIPIPGYKTKNTISLRLWDAKASAEDFNLFQFNDG---QYESAAQLHSRAQQICAVLY 287 (840)
Q Consensus 211 ~~~~~~g~~~w~~~~~v~av~yd~pi~gy~~~~~~~lrLw~a~v~~~~~~l~~~~~~---~y~~a~~~~~~~~~It~~LY 287 (840)
.| .....++|...++ ++++|+++.. .|+. +..+|
T Consensus 548 --------------------------~g----~~~~~~v~~~~~~--GV~vyfId~~~~~~fF~-----------R~~iY 584 (977)
T PLN02939 548 --------------------------DG----NLFKNKIWTGTVE--GLPVYFIEPQHPSKFFW-----------RAQYY 584 (977)
T ss_pred --------------------------cC----ceeEEEEEEEEEC--CeeEEEEecCCchhccC-----------CCCCC
Confidence 11 1223577777643 5778888742 3666 66889
Q ss_pred CC-CCchhhhhhhhhhhhHHHHhHHHHHHHHHHHcccCcccccCCCceEEEeCCCcccccHHHHHHHHHhhcCCChhHHh
Q 003188 288 PG-DSTEEGKLLRLKQQFFLCSASLQDMILRFKERKSGRQWSEFPSKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAW 366 (840)
Q Consensus 288 p~-D~~~~Gk~lRL~Qeyfl~~a~lqdiir~~~~~~g~~~l~~l~~~~viHlNDtHpalaipElmR~l~d~~~l~~~~A~ 366 (840)
+. |+.+ ++.|||.|+++.+. . .+ +.|++|||||||+||++|-+++.... .++
T Consensus 585 g~~Dn~~--------RF~~FsrAaLe~~~-~---~~--------~~PDIIH~HDW~TaLV~pll~~~y~~-~~~------ 637 (977)
T PLN02939 585 GEHDDFK--------RFSYFSRAALELLY-Q---SG--------KKPDIIHCHDWQTAFVAPLYWDLYAP-KGF------ 637 (977)
T ss_pred CCccHHH--------HHHHHHHHHHHHHH-h---cC--------CCCCEEEECCccHHHHHHHHHHHHhh-ccC------
Confidence 64 5544 89999999997542 1 11 67899999999999986766644321 221
Q ss_pred hhcCccEEEeecCChhhhHhhccHHHHHhhchhHHHHHHHHHHHHHHHHHHhcCCCcccccccccccCCCCCCccccccc
Q 003188 367 DITTRTVAYTNHTVLPEALEKWSQAVMWKLLPRHMEIIEEIDKRFIAMVRSTRSDLESKIPSMCILDNNPKKPVVRMANL 446 (840)
Q Consensus 367 ~i~~~~~vfT~HT~~~eglE~w~~~l~~~lLPr~~~ii~~in~~f~~~~~~~~~~~~~~~~~~~iie~~~~~~~v~Ma~l 446 (840)
....+|||+||+.+||. ||.+.+..+ |++++.+.+....+++ .++.+|+++.
T Consensus 638 --~~~ktVfTIHNl~yQG~--f~~~~l~~l-----------------------GL~~~~l~~~d~le~~-~~~~iN~LK~ 689 (977)
T PLN02939 638 --NSARICFTCHNFEYQGT--APASDLASC-----------------------GLDVHQLDRPDRMQDN-AHGRINVVKG 689 (977)
T ss_pred --CCCcEEEEeCCCcCCCc--CCHHHHHHc-----------------------CCCHHHccChhhhhhc-cCCchHHHHH
Confidence 23469999999999997 887776533 2222222111111110 1358999999
Q ss_pred ccccCCcccchhhhhHHHHHhhhhc-Ccccc---CCCCCcccccccCcccccccCChhhhHHHHhhcCccccccChhhHh
Q 003188 447 CVVSAHTVNGVAQLHSDILKADLFA-DYVSL---WPNKLQNKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLLV 522 (840)
Q Consensus 447 ai~~S~~VNgVS~lH~eilk~~~f~-~~~~l---~p~k~~~iTNGI~~rrWl~~~NP~l~~li~~~~g~~~w~~~~~~l~ 522 (840)
||++|+.|++||+.|++++++ .++ ++.++ .+.++.+|.||||+..| ||..+++|...|+
T Consensus 690 GIv~AD~VtTVSptYA~EI~t-e~G~GL~~~L~~~~~Kl~gIlNGID~e~w----nPatD~~L~~~Ys------------ 752 (977)
T PLN02939 690 AIVYSNIVTTVSPTYAQEVRS-EGGRGLQDTLKFHSKKFVGILNGIDTDTW----NPSTDRFLKVQYN------------ 752 (977)
T ss_pred HHHhCCeeEeeeHHHHHHHHH-HhccchHHHhccccCCceEEecceehhhc----CCccccccccccC------------
Confidence 999999999999999998887 565 66554 47899999999999999 9999999999998
Q ss_pred hhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCC-CCCceEeecccchhhhhhhhhhhHHHHHHHHHhhcCcccc
Q 003188 523 GLRQFADNTELQAEWESAKMASKKHLADYIWRVTGVTID-PNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQER 601 (840)
Q Consensus 523 ~l~~~~~d~~~~~~~~~~K~~nK~~L~~~i~~~~G~~~d-p~~l~d~~vkR~heYKRq~Lnll~ii~~y~~ik~~~p~~~ 601 (840)
++| | +.|..||..|. +++|++.+ ++.+++++|.||+++|+.++ ++..+.++.+ .
T Consensus 753 -----~~d------l-~GK~~nK~aLR----kelGL~~~d~d~pLIg~VGRL~~QKGiDl-LleA~~~Ll~--~------ 807 (977)
T PLN02939 753 -----AND------L-QGKAANKAALR----KQLGLSSADASQPLVGCITRLVPQKGVHL-IRHAIYKTAE--L------ 807 (977)
T ss_pred -----hhh------h-hhhhhhhHHHH----HHhCCCcccccceEEEEeecCCcccChHH-HHHHHHHHhh--c------
Confidence 556 7 79999999987 58998754 78899999999999999999 9888776543 1
Q ss_pred CCCCCeEEEEEecC-CcCCHHHHHHHHHHHHHHhhhcCCcCCCCcceEEEEcCCCHHHHhhhccCccccccCCCCCccCC
Q 003188 602 KKTTPRTIMIGGKA-FATYTNAKRIVKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEAS 680 (840)
Q Consensus 602 ~~~~p~~~If~GKA-~P~y~~aK~iIk~I~~la~~in~d~~~~~~lkVvFl~nYnvslA~~ii~gaDv~l~iS~a~~EAs 680 (840)
+.+||++|.+ .|.|.. .+..+++... ..+ +|.|+..|+..+++.+++|||++++||+ +|||
T Consensus 808 ----dvqLVIvGdGp~~~~e~------eL~~La~~l~----l~d--rV~FlG~~de~lah~IYAaADIFLmPSr--~EPf 869 (977)
T PLN02939 808 ----GGQFVLLGSSPVPHIQR------EFEGIADQFQ----SNN--NIRLILKYDEALSHSIYAASDMFIIPSM--FEPC 869 (977)
T ss_pred ----CCEEEEEeCCCcHHHHH------HHHHHHHHcC----CCC--eEEEEeccCHHHHHHHHHhCCEEEECCC--ccCC
Confidence 4689999998 454433 3556665432 345 8999999999999999999999999999 9999
Q ss_pred CcchhHHhhcCceEeeecCchhHHHHHHhcCcceEeecCccccchhhhhhccCCCCCCChhHHHHHHHHhcCC-CCCCCh
Q 003188 681 GTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAVAEQVPKLRKEREDGLFKPDPRFEEAKQFIRSGA-FGSYDY 759 (840)
Q Consensus 681 GTs~MKam~NGal~i~tlDGanvEi~~~vG~~N~~~fG~~~d~V~~~~~~~~y~~~~~~~~l~~v~~~~~~G~-f~~~~~ 759 (840)
|+++|.||.+|+++|+| .+|| ..|+|.+.+. ... + ..-.+|+ |.+.+.
T Consensus 870 GLvqLEAMAyGtPPVVs----------~vGG--------L~DtV~d~d~------e~i-~------~eg~NGfLf~~~D~ 918 (977)
T PLN02939 870 GLTQMIAMRYGSVPIVR----------KTGG--------LNDSVFDFDD------ETI-P------VELRNGFTFLTPDE 918 (977)
T ss_pred cHHHHHHHHCCCCEEEe----------cCCC--------CcceeecCCc------ccc-c------cCCCceEEecCCCH
Confidence 99999999999999966 6777 7777765321 000 0 0125785 778888
Q ss_pred HHHHHHHhhCCCCCCCccccccCChHHHHHHHHHHHHHh-cCHHHHHHHHHHHhccCCCCChHHHHHHHHH
Q 003188 760 NPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAY-KDQKKWLKMSILSTAGSGKFSSDRTIAQYAK 829 (840)
Q Consensus 760 ~~l~~~L~~~~~~~~~D~~~~~~Df~~y~~~~~~~~~~Y-~d~~~W~~~~~~n~a~~g~FSsDrti~eYa~ 829 (840)
++|.++|. ++...| .|++.|.+|..++|+. +|||++++++|.+
T Consensus 919 eaLa~AL~-------------------------rAL~~~~~dpe~~~~L~~~am~~--dFSWe~~A~qYee 962 (977)
T PLN02939 919 QGLNSALE-------------------------RAFNYYKRKPEVWKQLVQKDMNI--DFSWDSSASQYEE 962 (977)
T ss_pred HHHHHHHH-------------------------HHHHHhccCHHHHHHHHHHHHHh--cCCHHHHHHHHHH
Confidence 89988886 777766 5799999999998876 8999999999974
No 12
>PRK14098 glycogen synthase; Provisional
Probab=100.00 E-value=3.4e-42 Score=395.81 Aligned_cols=451 Identities=18% Similarity=0.258 Sum_probs=332.6
Q ss_pred cCCCCCCcccchhhhHhhhhccCCCeEEEeeccCCccceEEeeCCceeeccccccccCCCcccccCCeeEEEEECCeEEE
Q 003188 134 AALGNGGLGRLASCFLDSMATLNLPAWGYGLRYRYGLFKQKITKQGQEEVAEDWLEKFSPWEVVRHDVVFPVRFFGSVMV 213 (840)
Q Consensus 134 ~~LgnGGLGrLAac~ldS~a~l~~p~~G~GlrY~~G~F~Q~i~dG~Q~E~pd~Wl~~~~pwe~~r~~~~~~V~f~g~~~~ 213 (840)
|=.=.||||--++..=++++.+|.-+.-+-=+|.. +.+. .+|. ++ ..
T Consensus 17 p~~k~Ggl~dv~~~Lp~al~~~g~~v~v~~P~y~~-~~~~----~~~~--~~---------------~~----------- 63 (489)
T PRK14098 17 PFVRVSALADFMASFPQALEEEGFEARIMMPKYGT-INDR----KFRL--HD---------------VL----------- 63 (489)
T ss_pred hhcccchHHHHHHHHHHHHHHCCCeEEEEcCCCCc-hhhh----hhcc--cc---------------ce-----------
Confidence 33458999999999999999999877666665542 1110 0110 00 00
Q ss_pred cCCCceeeeCCeEEEEEEeeeccCCCCCCceEEEEEEEEEcCCCCccccccCcchhhhhHhhhhhhccccccccCC----
Q 003188 214 NPNGTRKWVGGEVVQAVAYDIPIPGYKTKNTISLRLWDAKASAEDFNLFQFNDGQYESAAQLHSRAQQICAVLYPG---- 289 (840)
Q Consensus 214 ~~~g~~~w~~~~~v~av~yd~pi~gy~~~~~~~lrLw~a~v~~~~~~l~~~~~~~y~~a~~~~~~~~~It~~LYp~---- 289 (840)
.+ ..+++++.+ .+...+++.+..+..++++|+++++.|++ +..+|++
T Consensus 64 ------------~~--~~~~~~~~~----~~~~~~~~~~~~~~~~v~~~~~~~~~~f~-----------r~~~y~~~~~g 114 (489)
T PRK14098 64 ------------RL--SDIEVPLKE----KTDLLHVKVTALPSSKIQTYFLYNEKYFK-----------RNGLFTDMSLG 114 (489)
T ss_pred ------------EE--EEEEEeecC----eeEEEEEEEecccCCCceEEEEeCHHHcC-----------CCCcCCCCccC
Confidence 00 011122211 12233444333232357889999999987 6678964
Q ss_pred ----CCchhhhhhhhhhhhHHHHhHHHHHHHHHHHcccCcccccCCCceEEEeCCCcccccHHHHHHHHHhhcCCChhHH
Q 003188 290 ----DSTEEGKLLRLKQQFFLCSASLQDMILRFKERKSGRQWSEFPSKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEA 365 (840)
Q Consensus 290 ----D~~~~Gk~lRL~Qeyfl~~a~lqdiir~~~~~~g~~~l~~l~~~~viHlNDtHpalaipElmR~l~d~~~l~~~~A 365 (840)
|+.+ ++.||+.|+++.+. +.+ ++|++||+||||+|++ |-+++...... ..
T Consensus 115 ~~~~d~~~--------rf~~f~~a~l~~~~----~~~--------~~pDiiH~hdw~t~l~-~~~l~~~~~~~-----~~ 168 (489)
T PRK14098 115 GDLKGSAE--------KVIFFNVGVLETLQ----RLG--------WKPDIIHCHDWYAGLV-PLLLKTVYADH-----EF 168 (489)
T ss_pred CCCCcHHH--------HHHHHHHHHHHHHH----hcC--------CCCCEEEecCcHHHHH-HHHHHHHhhhc-----cc
Confidence 4444 88899999987531 111 6789999999999998 66777654321 11
Q ss_pred hhhcCccEEEeecCChhhhHhhccHHHHHhhchhHHHHHHHHHHHHHHHHHHhcCCCcccccccccccCCCCCCcccccc
Q 003188 366 WDITTRTVAYTNHTVLPEALEKWSQAVMWKLLPRHMEIIEEIDKRFIAMVRSTRSDLESKIPSMCILDNNPKKPVVRMAN 445 (840)
Q Consensus 366 ~~i~~~~~vfT~HT~~~eglE~w~~~l~~~lLPr~~~ii~~in~~f~~~~~~~~~~~~~~~~~~~iie~~~~~~~v~Ma~ 445 (840)
+ .+..+|||+||+.+||. ||...+..++|..+ +..+ +. ..+.+|+++
T Consensus 169 ~--~~~~~V~TiHn~~~qg~--~~~~~~~~~~~~~~------------------------~~~~---~~--~~~~~n~lk 215 (489)
T PRK14098 169 F--KDIKTVLTIHNVYRQGV--LPFKVFQKLLPEEV------------------------CSGL---HR--EGDEVNMLY 215 (489)
T ss_pred c--CCCCEEEEcCCCcccCC--CCHHHHHHhCCHHh------------------------hhhh---hh--cCCcccHHH
Confidence 1 24579999999999997 88887776665432 0000 11 124799999
Q ss_pred cccccCCcccchhhhhHHHHHhh-hhc-Ccccc---CCCCCcccccccCcccccccCChhhhHHHHhhcCccccccChhh
Q 003188 446 LCVVSAHTVNGVAQLHSDILKAD-LFA-DYVSL---WPNKLQNKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLDL 520 (840)
Q Consensus 446 lai~~S~~VNgVS~lH~eilk~~-~f~-~~~~l---~p~k~~~iTNGI~~rrWl~~~NP~l~~li~~~~g~~~w~~~~~~ 520 (840)
.|+..|+.|++||+.+++++++. .++ ++.++ .+.++..|.||||+..| ||..++.+.+.++
T Consensus 216 ~~i~~ad~VitVS~~~a~ei~~~~~~~~gl~~~l~~~~~kl~~I~NGID~~~~----~p~~d~~~~~~~~---------- 281 (489)
T PRK14098 216 TGVEHADLLTTTSPRYAEEIAGDGEEAFGLDKVLEERKMRLHGILNGIDTRQW----NPSTDKLIKKRYS---------- 281 (489)
T ss_pred HHHHhcCcceeeCHHHHHHhCcCCCCCcChHHHHHhcCCCeeEEeCCcccccc----CCcccccccccCC----------
Confidence 99999999999999999988763 343 44433 37899999999999999 8988887777777
Q ss_pred HhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCceEeecccchhhhhhhhhhhHHHHHHHHHhhcCccc
Q 003188 521 LVGLRQFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQE 600 (840)
Q Consensus 521 l~~l~~~~~d~~~~~~~~~~K~~nK~~L~~~i~~~~G~~~dp~~l~d~~vkR~heYKRq~Lnll~ii~~y~~ik~~~p~~ 600 (840)
+++ + +.|..||..|. +++|++.+++.+++++|.|+.++|+.++ ++.++.++.+
T Consensus 282 -------~~~------~-~~k~~~k~~l~----~~lgl~~~~~~~~i~~vgRl~~~KG~d~-li~a~~~l~~-------- 334 (489)
T PRK14098 282 -------IER------L-DGKLENKKALL----EEVGLPFDEETPLVGVIINFDDFQGAEL-LAESLEKLVE-------- 334 (489)
T ss_pred -------cch------h-hhHHHHHHHHH----HHhCCCCccCCCEEEEeccccccCcHHH-HHHHHHHHHh--------
Confidence 333 5 68999999887 4899999999999999999999999999 9988877643
Q ss_pred cCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcCCCCcceEEEEcCCCHHHHhhhccCccccccCCCCCccCC
Q 003188 601 RKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEAS 680 (840)
Q Consensus 601 ~~~~~p~~~If~GKA~P~y~~aK~iIk~I~~la~~in~d~~~~~~lkVvFl~nYnvslA~~ii~gaDv~l~iS~a~~EAs 680 (840)
.++++|+.|.+.+.|.. .+.++++. .++ +|.|+..|+.++++.++++||++++||+ +|+|
T Consensus 335 ----~~~~lvivG~G~~~~~~------~l~~l~~~------~~~--~V~~~g~~~~~~~~~~~a~aDi~l~PS~--~E~~ 394 (489)
T PRK14098 335 ----LDIQLVICGSGDKEYEK------RFQDFAEE------HPE--QVSVQTEFTDAFFHLAIAGLDMLLMPGK--IESC 394 (489)
T ss_pred ----cCcEEEEEeCCCHHHHH------HHHHHHHH------CCC--CEEEEEecCHHHHHHHHHhCCEEEeCCC--CCCc
Confidence 15799999998765543 45666653 345 7999999999999999999999999999 9999
Q ss_pred CcchhHHhhcCceEeeecCchhHHHHHHhcCcceEeecCccccchhhhhhccCCCCCCChhHHHHHHHHhcCC-CCCCCh
Q 003188 681 GTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAVAEQVPKLRKEREDGLFKPDPRFEEAKQFIRSGA-FGSYDY 759 (840)
Q Consensus 681 GTs~MKam~NGal~i~tlDGanvEi~~~vG~~N~~~fG~~~d~V~~~~~~~~y~~~~~~~~l~~v~~~~~~G~-f~~~~~ 759 (840)
|+++|.||++|+++|+| .+|| ..|+|.++... -.+|+ |.+.+.
T Consensus 395 Gl~~lEAma~G~ppVv~----------~~GG--------l~d~v~~~~~~------------------~~~G~l~~~~d~ 438 (489)
T PRK14098 395 GMLQMFAMSYGTIPVAY----------AGGG--------IVETIEEVSED------------------KGSGFIFHDYTP 438 (489)
T ss_pred hHHHHHHHhCCCCeEEe----------cCCC--------CceeeecCCCC------------------CCceeEeCCCCH
Confidence 99999999999999977 5666 66777543210 14675 677778
Q ss_pred HHHHHHHhhCCCCCCCccccccCChHHHHHHHHHHHHHhcCHHHHHHHHHHHhccCCCCChHHHHHHHHH
Q 003188 760 NPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYKDQKKWLKMSILSTAGSGKFSSDRTIAQYAK 829 (840)
Q Consensus 760 ~~l~~~L~~~~~~~~~D~~~~~~Df~~y~~~~~~~~~~Y~d~~~W~~~~~~n~a~~g~FSsDrti~eYa~ 829 (840)
++|.++|. ++...|.|++.|.+++.++|+. +|||++++++|.+
T Consensus 439 ~~la~ai~-------------------------~~l~~~~~~~~~~~~~~~~~~~--~fsw~~~a~~y~~ 481 (489)
T PRK14098 439 EALVAKLG-------------------------EALALYHDEERWEELVLEAMER--DFSWKNSAEEYAQ 481 (489)
T ss_pred HHHHHHHH-------------------------HHHHHHcCHHHHHHHHHHHhcC--CCChHHHHHHHHH
Confidence 88888886 8888899999999999999876 8999999999954
No 13
>PRK14099 glycogen synthase; Provisional
Probab=100.00 E-value=1.1e-39 Score=374.72 Aligned_cols=393 Identities=18% Similarity=0.201 Sum_probs=297.4
Q ss_pred EEEEEEEEcCCCCccccccCcchhhhhHhhhhhhcccccc-ccCC-------CCchhhhhhhhhhhhHHHHhHHHHHHHH
Q 003188 246 SLRLWDAKASAEDFNLFQFNDGQYESAAQLHSRAQQICAV-LYPG-------DSTEEGKLLRLKQQFFLCSASLQDMILR 317 (840)
Q Consensus 246 ~lrLw~a~v~~~~~~l~~~~~~~y~~a~~~~~~~~~It~~-LYp~-------D~~~~Gk~lRL~Qeyfl~~a~lqdiir~ 317 (840)
+.++|...++ ++++|+++++.|++ +.. +|++ |+.+ ++.|||.|+++.+ +.
T Consensus 70 ~~~~~~~~~~--~v~~~~~~~~~~f~-----------r~~~~y~~~~~~~~~d~~~--------rf~~f~~a~~~~~-~~ 127 (485)
T PRK14099 70 PARLLAARAG--GLDLFVLDAPHLYD-----------RPGNPYVGPDGKDWPDNAQ--------RFAALARAAAAIG-QG 127 (485)
T ss_pred eEEEEEEEeC--CceEEEEeChHhhC-----------CCCCCCCCccCCCCCcHHH--------HHHHHHHHHHHHH-hh
Confidence 3567877643 57889999999986 443 6742 4544 8899999999743 11
Q ss_pred HHHcccCcccccCCCceEEEeCCCcccccHHHHHHHHHhhcCCChhHHhhhcCccEEEeecCChhhhHhhccHHHHHhhc
Q 003188 318 FKERKSGRQWSEFPSKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEALEKWSQAVMWKLL 397 (840)
Q Consensus 318 ~~~~~g~~~l~~l~~~~viHlNDtHpalaipElmR~l~d~~~l~~~~A~~i~~~~~vfT~HT~~~eglE~w~~~l~~~lL 397 (840)
+..-++|++||+||||++++ |-+++.. . ..+..+|||+||+.++|. ||..++..+
T Consensus 128 ---------~~~~~~pDIiH~Hdw~~~l~-~~~l~~~----~--------~~~~~~V~TiHn~~~qg~--~~~~~~~~~- 182 (485)
T PRK14099 128 ---------LVPGFVPDIVHAHDWQAGLA-PAYLHYS----G--------RPAPGTVFTIHNLAFQGQ--FPRELLGAL- 182 (485)
T ss_pred ---------hccCCCCCEEEECCcHHHHH-HHHHHhC----C--------CCCCCEEEeCCCCCCCCc--CCHHHHHHc-
Confidence 10015789999999999997 6666531 0 123459999999999997 887776643
Q ss_pred hhHHHHHHHHHHHHHHHHHHhcCCCcccccccccccCCCCCCcccccccccccCCcccchhhhhHHHHHhhhhc-Ccccc
Q 003188 398 PRHMEIIEEIDKRFIAMVRSTRSDLESKIPSMCILDNNPKKPVVRMANLCVVSAHTVNGVAQLHSDILKADLFA-DYVSL 476 (840)
Q Consensus 398 Pr~~~ii~~in~~f~~~~~~~~~~~~~~~~~~~iie~~~~~~~v~Ma~lai~~S~~VNgVS~lH~eilk~~~f~-~~~~l 476 (840)
+.+++.+...++ +. .+.+|+.+.++..|+.|++||+.+++.+++..++ ++.++
T Consensus 183 ----------------------~~~~~~~~~~~~-~~---~~~~~~~k~~i~~ad~vitVS~~~a~ei~~~~~g~gl~~~ 236 (485)
T PRK14099 183 ----------------------GLPPSAFSLDGV-EY---YGGIGYLKAGLQLADRITTVSPTYALEIQGPEAGMGLDGL 236 (485)
T ss_pred ----------------------CCChHHcCchhh-hh---CCCccHHHHHHHhcCeeeecChhHHHHHhcccCCcChHHH
Confidence 222221211111 21 3478999999999999999999999988865444 44433
Q ss_pred ---CCCCCcccccccCcccccccCChhhhHHHHhhcCccccccChhhHhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHH
Q 003188 477 ---WPNKLQNKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLLVGLRQFADNTELQAEWESAKMASKKHLADYIW 553 (840)
Q Consensus 477 ---~p~k~~~iTNGI~~rrWl~~~NP~l~~li~~~~g~~~w~~~~~~l~~l~~~~~d~~~~~~~~~~K~~nK~~L~~~i~ 553 (840)
.++++..|.||||+..| ||..++.+...++ +++ + +.|..||..|.
T Consensus 237 l~~~~~ki~vI~NGID~~~f----~p~~~~~~~~~~~-----------------~~~------~-~~k~~~k~~l~---- 284 (485)
T PRK14099 237 LRQRADRLSGILNGIDTAVW----NPATDELIAATYD-----------------VET------L-AARAANKAALQ---- 284 (485)
T ss_pred HHhhCCCeEEEecCCchhhc----cccccchhhhcCC-----------------hhH------H-HhHHHhHHHHH----
Confidence 46789999999999999 9999888887777 333 5 68899998886
Q ss_pred HHhCCCCCCCCceEeecccchhhhhhhhhhhHHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHH
Q 003188 554 RVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVG 633 (840)
Q Consensus 554 ~~~G~~~dp~~l~d~~vkR~heYKRq~Lnll~ii~~y~~ik~~~p~~~~~~~p~~~If~GKA~P~y~~aK~iIk~I~~la 633 (840)
+++|++.+++.++.++|.||.++|+.++ ++..+.++.+ . +.++|+.|.+.+.+.. .+.+++
T Consensus 285 ~~~gl~~~~~~~li~~VgRL~~~KG~d~-Li~A~~~l~~--~----------~~~lvivG~G~~~~~~------~l~~l~ 345 (485)
T PRK14099 285 ARFGLDPDPDALLLGVISRLSWQKGLDL-LLEALPTLLG--E----------GAQLALLGSGDAELEA------RFRAAA 345 (485)
T ss_pred HHcCCCcccCCcEEEEEecCCccccHHH-HHHHHHHHHh--c----------CcEEEEEecCCHHHHH------HHHHHH
Confidence 5899988889999999999999999999 9988877643 1 4689999998765443 355555
Q ss_pred hhhcCCcCCCCcceEEEEcCCCHHHHhhhccCccccccCCCCCccCCCcchhHHhhcCceEeeecCchhHHHHHHhcCcc
Q 003188 634 EVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEEN 713 (840)
Q Consensus 634 ~~in~d~~~~~~lkVvFl~nYnvslA~~ii~gaDv~l~iS~a~~EAsGTs~MKam~NGal~i~tlDGanvEi~~~vG~~N 713 (840)
+. .++ +|+++.+|+..+++.++++||++++||+ +|+||+++|.||.+|+++|.| .+||
T Consensus 346 ~~------~~~--~v~~~~G~~~~l~~~~~a~aDifv~PS~--~E~fGl~~lEAma~G~ppVvs----------~~GG-- 403 (485)
T PRK14099 346 QA------YPG--QIGVVIGYDEALAHLIQAGADALLVPSR--FEPCGLTQLCALRYGAVPVVA----------RVGG-- 403 (485)
T ss_pred HH------CCC--CEEEEeCCCHHHHHHHHhcCCEEEECCc--cCCCcHHHHHHHHCCCCcEEe----------CCCC--
Confidence 42 345 6777888999999999999999999999 999999999999999999966 5677
Q ss_pred eEeecCccccchhhhhhccCCCCCCChhHHHHHHHHhcCC-CCCCChHHHHHHHhhCCCCCCCccccccCChHHHHHHHH
Q 003188 714 FFLFGAVAEQVPKLRKEREDGLFKPDPRFEEAKQFIRSGA-FGSYDYNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQD 792 (840)
Q Consensus 714 ~~~fG~~~d~V~~~~~~~~y~~~~~~~~l~~v~~~~~~G~-f~~~~~~~l~~~L~~~~~~~~~D~~~~~~Df~~y~~~~~ 792 (840)
..|+|.+... .. +. ....+|+ |.+.+.++|.++|.
T Consensus 404 ------l~d~V~~~~~------~~---~~----~~~~~G~l~~~~d~~~La~ai~------------------------- 439 (485)
T PRK14099 404 ------LADTVVDANE------MA---IA----TGVATGVQFSPVTADALAAALR------------------------- 439 (485)
T ss_pred ------ccceeecccc------cc---cc----cCCCceEEeCCCCHHHHHHHHH-------------------------
Confidence 7777764311 00 00 0014675 77888899998886
Q ss_pred HHHHHhcCHHHHHHHHHHHhccCCCCChHHHHHHHHHH
Q 003188 793 RVDQAYKDQKKWLKMSILSTAGSGKFSSDRTIAQYAKE 830 (840)
Q Consensus 793 ~~~~~Y~d~~~W~~~~~~n~a~~g~FSsDrti~eYa~~ 830 (840)
++..+|.|++.|.++..++|+. +|||++++++|.+-
T Consensus 440 ~a~~l~~d~~~~~~l~~~~~~~--~fSw~~~a~~y~~l 475 (485)
T PRK14099 440 KTAALFADPVAWRRLQRNGMTT--DVSWRNPAQHYAAL 475 (485)
T ss_pred HHHHHhcCHHHHHHHHHHhhhh--cCChHHHHHHHHHH
Confidence 8888899999999999999976 89999999999653
No 14
>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.
Probab=100.00 E-value=4.8e-38 Score=358.39 Aligned_cols=451 Identities=18% Similarity=0.218 Sum_probs=328.3
Q ss_pred cCCCCCCcccchhhhHhhhhccCCCeEEEeeccCCccceEEeeCCceeeccccccccCCCcccccCCeeEEEEECCeEEE
Q 003188 134 AALGNGGLGRLASCFLDSMATLNLPAWGYGLRYRYGLFKQKITKQGQEEVAEDWLEKFSPWEVVRHDVVFPVRFFGSVMV 213 (840)
Q Consensus 134 ~~LgnGGLGrLAac~ldS~a~l~~p~~G~GlrY~~G~F~Q~i~dG~Q~E~pd~Wl~~~~pwe~~r~~~~~~V~f~g~~~~ 213 (840)
|-.-.||||...++.-++|+.+|.-+.-+.-+|.... + .|... + .+.
T Consensus 12 P~~k~GGl~~~v~~L~~aL~~~G~~v~v~~p~y~~~~------~--------~~~~~-----~-------~~~------- 58 (473)
T TIGR02095 12 PFAKTGGLADVVGALPKALAALGHDVRVLLPAYGCIE------D--------EVDDQ-----V-------KVV------- 58 (473)
T ss_pred cccCcCcHHHHHHHHHHHHHHcCCeEEEEecCCcChh------h--------hhccC-----e-------EEE-------
Confidence 3356899999999999999999999988888887532 0 00000 0 000
Q ss_pred cCCCceeeeCCeEEEEEEeeeccCCCCCCceEEEEEEEEEcCCCCccccccCcchhhhhHhhhhhhcccc-ccccCCCCc
Q 003188 214 NPNGTRKWVGGEVVQAVAYDIPIPGYKTKNTISLRLWDAKASAEDFNLFQFNDGQYESAAQLHSRAQQIC-AVLYPGDST 292 (840)
Q Consensus 214 ~~~g~~~w~~~~~v~av~yd~pi~gy~~~~~~~lrLw~a~v~~~~~~l~~~~~~~y~~a~~~~~~~~~It-~~LYp~D~~ 292 (840)
....+++.| ....+++|...++ ++++++++++.|++ + ..+|++|-.
T Consensus 59 ----------------~~~~~~~~~----~~~~~~~~~~~~~--~v~~~~i~~~~~~~-----------r~~~~y~~~~~ 105 (473)
T TIGR02095 59 ----------------ELVDLSVGP----RTLYVKVFEGVVE--GVPVYFIDNPSLFD-----------RPGGIYGDDYP 105 (473)
T ss_pred ----------------EEEEEeecC----ceeEEEEEEEEEC--CceEEEEECHHHcC-----------CCCCCCCCCCC
Confidence 011122222 2456678887643 57888998887775 3 359984111
Q ss_pred hhhhhhhhhhhhHHHHhHHHHHHHHHHHcccCcccccCCCceEEEeCCCcccccHHHHHHHHHhhcCCChhHHhhhcCcc
Q 003188 293 EEGKLLRLKQQFFLCSASLQDMILRFKERKSGRQWSEFPSKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRT 372 (840)
Q Consensus 293 ~~Gk~lRL~Qeyfl~~a~lqdiir~~~~~~g~~~l~~l~~~~viHlNDtHpalaipElmR~l~d~~~l~~~~A~~i~~~~ 372 (840)
-.+.++.+|+.|+++.+. + .+ .+|++||+||||++++ +-+++..... .+..
T Consensus 106 -----d~~~r~~~f~~a~~~~~~-~---~~--------~~~DiiH~hdw~~~~~-~~~l~~~~~~-----------~~~~ 156 (473)
T TIGR02095 106 -----DNAERFAFFSRAAAELLS-G---LG--------WQPDVVHAHDWHTALV-PALLKAVYRP-----------NPIK 156 (473)
T ss_pred -----CHHHHHHHHHHHHHHHHH-h---cC--------CCCCEEEECCcHHHHH-HHHHHhhccC-----------CCCC
Confidence 123478899999987542 1 11 5788999999999997 5666643210 0356
Q ss_pred EEEeecCChhhhHhhccHHHHHhhchhHHHHHHHHHHHHHHHHHHhcCCCcccccccccccCCCCCCcccccccccccCC
Q 003188 373 VAYTNHTVLPEALEKWSQAVMWKLLPRHMEIIEEIDKRFIAMVRSTRSDLESKIPSMCILDNNPKKPVVRMANLCVVSAH 452 (840)
Q Consensus 373 ~vfT~HT~~~eglE~w~~~l~~~lLPr~~~ii~~in~~f~~~~~~~~~~~~~~~~~~~iie~~~~~~~v~Ma~lai~~S~ 452 (840)
++||+|++.++|. ||...+..+ +.++..+.... .+. .+.+||.+.++..|+
T Consensus 157 ~v~TiH~~~~~g~--~~~~~~~~~-----------------------~~~~~~~~~~~-~~~---~~~~~~~k~~~~~ad 207 (473)
T TIGR02095 157 TVFTIHNLAYQGV--FPADDFSEL-----------------------GLPPEYFHMEG-LEF---YGRVNFLKGGIVYAD 207 (473)
T ss_pred EEEEcCCCccCCc--CCHHHHHHc-----------------------CCChHHcCchh-hhc---CCchHHHHHHHHhCC
Confidence 9999999999996 887766542 22211111111 121 247999999999999
Q ss_pred cccchhhhhHHHHHhhhhc-Cccc---cCCCCCcccccccCcccccccCChhhhHHHHhhcCccccccChhhHhhhhccC
Q 003188 453 TVNGVAQLHSDILKADLFA-DYVS---LWPNKLQNKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLLVGLRQFA 528 (840)
Q Consensus 453 ~VNgVS~lH~eilk~~~f~-~~~~---l~p~k~~~iTNGI~~rrWl~~~NP~l~~li~~~~g~~~w~~~~~~l~~l~~~~ 528 (840)
.|++||+.|++.+++..++ ++.. ..+.++..|.||||..+| ||..++.+...++ +
T Consensus 208 ~v~tVS~~~~~ei~~~~~~~~l~~~l~~~~~ki~~I~NGid~~~~----~p~~~~~~~~~~~-----------------~ 266 (473)
T TIGR02095 208 RVTTVSPTYAREILTPEFGYGLDGVLKARSGKLRGILNGIDTEVW----NPATDPYLKANYS-----------------A 266 (473)
T ss_pred cCeecCHhHHHHhcCCcCCccchhHHHhcCCCeEEEeCCCCcccc----CCCCCcccccCcC-----------------c
Confidence 9999999999988765454 3432 246899999999999999 8988877766665 3
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCceEeecccchhhhhhhhhhhHHHHHHHHHhhcCccccCCCCCeE
Q 003188 529 DNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRT 608 (840)
Q Consensus 529 ~d~~~~~~~~~~K~~nK~~L~~~i~~~~G~~~dp~~l~d~~vkR~heYKRq~Lnll~ii~~y~~ik~~~p~~~~~~~p~~ 608 (840)
++ + +.|..+|..|. +++|++.+++.++++++.|+.++|+.++ ++.++.++.+ . +++
T Consensus 267 ~~------~-~~k~~~k~~l~----~~~gl~~~~~~~~i~~vGrl~~~Kg~~~-li~a~~~l~~--~----------~~~ 322 (473)
T TIGR02095 267 DD------L-AGKAENKEALQ----EELGLPVDDDVPLFGVISRLTQQKGVDL-LLAALPELLE--L----------GGQ 322 (473)
T ss_pred cc------h-hhhhhhHHHHH----HHcCCCccCCCCEEEEEecCccccChHH-HHHHHHHHHH--c----------CcE
Confidence 33 5 57888888876 5899987789999999999999999999 9888877643 1 479
Q ss_pred EEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcCCCCcceEEEEcCCCHHHHhhhccCccccccCCCCCccCCCcchhHHh
Q 003188 609 IMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFS 688 (840)
Q Consensus 609 ~If~GKA~P~y~~aK~iIk~I~~la~~in~d~~~~~~lkVvFl~nYnvslA~~ii~gaDv~l~iS~a~~EAsGTs~MKam 688 (840)
++++|+++|.+.. .+.++++. .++ +|+|..+|+.++++.++++||++++||+ +|+||++.|.||
T Consensus 323 lvi~G~g~~~~~~------~l~~~~~~------~~~--~v~~~~~~~~~~~~~~~~~aDv~l~pS~--~E~~gl~~lEAm 386 (473)
T TIGR02095 323 LVVLGTGDPELEE------ALRELAER------YPG--NVRVIIGYDEALAHLIYAGADFILMPSR--FEPCGLTQLYAM 386 (473)
T ss_pred EEEECCCCHHHHH------HHHHHHHH------CCC--cEEEEEcCCHHHHHHHHHhCCEEEeCCC--cCCcHHHHHHHH
Confidence 9999999876543 35555542 344 7999999999999999999999999999 999999999999
Q ss_pred hcCceEeeecCchhHHHHHHhcCcceEeecCccccchhhhhhccCCCCCCChhHHHHHHHHhcCC-CCCCChHHHHHHHh
Q 003188 689 LNGCLIIGTLDGANVEIRQEIGEENFFLFGAVAEQVPKLRKEREDGLFKPDPRFEEAKQFIRSGA-FGSYDYNPLLDSLE 767 (840)
Q Consensus 689 ~NGal~i~tlDGanvEi~~~vG~~N~~~fG~~~d~V~~~~~~~~y~~~~~~~~l~~v~~~~~~G~-f~~~~~~~l~~~L~ 767 (840)
.+|+++|+| .+|| ..|.|.+.. +.. .-.+|. |.+.+.++|.++|.
T Consensus 387 a~G~pvI~s----------~~gg--------~~e~v~~~~------~~~----------~~~~G~l~~~~d~~~la~~i~ 432 (473)
T TIGR02095 387 RYGTVPIVR----------RTGG--------LADTVVDGD------PEA----------ESGTGFLFEEYDPGALLAALS 432 (473)
T ss_pred HCCCCeEEc----------cCCC--------ccceEecCC------CCC----------CCCceEEeCCCCHHHHHHHHH
Confidence 999999977 4555 556554321 100 124564 66777888888886
Q ss_pred hCCCCCCCccccccCChHHHHHHHHHHHHHhc-CHHHHHHHHHHHhccCCCCChHHHHHHHHHH
Q 003188 768 GNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYK-DQKKWLKMSILSTAGSGKFSSDRTIAQYAKE 830 (840)
Q Consensus 768 ~~~~~~~~D~~~~~~Df~~y~~~~~~~~~~Y~-d~~~W~~~~~~n~a~~g~FSsDrti~eYa~~ 830 (840)
++...|. |++.|.+|..+++.. +|||++++++|.+-
T Consensus 433 -------------------------~~l~~~~~~~~~~~~~~~~~~~~--~fsw~~~a~~~~~~ 469 (473)
T TIGR02095 433 -------------------------RALRLYRQDPSLWEALQKNAMSQ--DFSWDKSAKQYVEL 469 (473)
T ss_pred -------------------------HHHHHHhcCHHHHHHHHHHHhcc--CCCcHHHHHHHHHH
Confidence 7777776 999999999999876 89999999999753
No 15
>cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms.
Probab=100.00 E-value=1e-37 Score=354.15 Aligned_cols=462 Identities=20% Similarity=0.237 Sum_probs=329.4
Q ss_pred ccccCCCCCCcccchhhhHhhhhccCCCeEEEeeccCCccceEEeeCCceeeccccccccCCCcccccCCeeEEEEECCe
Q 003188 131 EKDAALGNGGLGRLASCFLDSMATLNLPAWGYGLRYRYGLFKQKITKQGQEEVAEDWLEKFSPWEVVRHDVVFPVRFFGS 210 (840)
Q Consensus 131 E~d~~LgnGGLGrLAac~ldS~a~l~~p~~G~GlrY~~G~F~Q~i~dG~Q~E~pd~Wl~~~~pwe~~r~~~~~~V~f~g~ 210 (840)
|..|-.-.||||...++.-++|+.+|..+.-+.-+|....- .|.. .++ ....+
T Consensus 8 E~~p~~k~GGl~~~~~~L~~aL~~~G~~V~Vi~p~y~~~~~--------------~~~~-----~~~-~~~~~------- 60 (476)
T cd03791 8 EVAPFAKTGGLGDVVGALPKALAKLGHDVRVIMPKYGRILD--------------ELRG-----QLL-VLRLF------- 60 (476)
T ss_pred cccccccCCcHHHHHHHHHHHHHHCCCeEEEEecCCcchhh--------------Hhcc-----CeE-EEEEE-------
Confidence 33445579999999999999999999999999888875421 0000 000 00000
Q ss_pred EEEcCCCceeeeCCeEEEEEEeeeccCCCCCCceEEEEEEEEEcCCCCccccccCcchhhhhHhhhhhhccccccccCCC
Q 003188 211 VMVNPNGTRKWVGGEVVQAVAYDIPIPGYKTKNTISLRLWDAKASAEDFNLFQFNDGQYESAAQLHSRAQQICAVLYPGD 290 (840)
Q Consensus 211 ~~~~~~g~~~w~~~~~v~av~yd~pi~gy~~~~~~~lrLw~a~v~~~~~~l~~~~~~~y~~a~~~~~~~~~It~~LYp~D 290 (840)
.+++.+ ....+++|...+ +.+++++++++.++. +..+|+..
T Consensus 61 ----------------------~~~~~~----~~~~~~~~~~~~--~gv~~~~l~~~~~~~-----------~~~~~~~~ 101 (476)
T cd03791 61 ----------------------GVPVGG----RPEYVGVFELPV--DGVPVYFLDNPDYFD-----------RPGLYDDS 101 (476)
T ss_pred ----------------------eeccCC----ceeEEEEEEEEe--CCceEEEEcChHHcC-----------CCCCCCcc
Confidence 111122 244566777664 357778887776654 33333110
Q ss_pred CchhhhhhhhhhhhHHHHhHHHHHHHHHHHcccCcccccCCCceEEEeCCCcccccHHHHHHHHHhhcCCChhHHhhhcC
Q 003188 291 STEEGKLLRLKQQFFLCSASLQDMILRFKERKSGRQWSEFPSKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITT 370 (840)
Q Consensus 291 ~~~~Gk~lRL~Qeyfl~~a~lqdiir~~~~~~g~~~l~~l~~~~viHlNDtHpalaipElmR~l~d~~~l~~~~A~~i~~ 370 (840)
..+-.-++.++.+|+.|+++.+. + .+ .+|++||+||||++++ +.+++..... . ...+
T Consensus 102 --~~~~~~~~~~~~~f~~~~~~~l~-~---~~--------~~pDviH~hd~~t~~~-~~~l~~~~~~------~--~~~~ 158 (476)
T cd03791 102 --GYDYEDNAERFALFSRAALELLR-R---LG--------WKPDIIHCHDWHTGLV-PALLKEKYAD------P--FFKN 158 (476)
T ss_pred --CCCCccHHHHHHHHHHHHHHHHH-h---cC--------CCCcEEEECchHHHHH-HHHHHHhhcc------c--cCCC
Confidence 01112255688999999987532 1 11 5789999999999997 5555543221 0 1245
Q ss_pred ccEEEeecCChhhhHhhccHHHHHhhchhHHHHHHHHHHHHHHHHHHhcCCCcccccccccccCCCCCCccccccccccc
Q 003188 371 RTVAYTNHTVLPEALEKWSQAVMWKLLPRHMEIIEEIDKRFIAMVRSTRSDLESKIPSMCILDNNPKKPVVRMANLCVVS 450 (840)
Q Consensus 371 ~~~vfT~HT~~~eglE~w~~~l~~~lLPr~~~ii~~in~~f~~~~~~~~~~~~~~~~~~~iie~~~~~~~v~Ma~lai~~ 450 (840)
..+|||+|++.++|. ++...+.... ..++....+...+ .+..++|.+.++..
T Consensus 159 ~~~v~tiH~~~~~g~--~~~~~~~~~~-----------------------~~~~~~~~~~~~~---~~~~~~~~~~~~~~ 210 (476)
T cd03791 159 IKTVFTIHNLAYQGV--FPLEALEDLG-----------------------LPWEELFHIDGLE---FYGQVNFLKAGIVY 210 (476)
T ss_pred CCEEEEeCCCCCCCC--CCHHHHHHcC-----------------------CCccchhhhcccc---cCCcccHHHHHHHh
Confidence 679999999999996 7777665431 1110000111111 12479999999999
Q ss_pred CCcccchhhhhHHHHHhhhhc-Ccccc---CCCCCcccccccCcccccccCChhhhHHHHhhcCccccccChhhHhhhhc
Q 003188 451 AHTVNGVAQLHSDILKADLFA-DYVSL---WPNKLQNKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLLVGLRQ 526 (840)
Q Consensus 451 S~~VNgVS~lH~eilk~~~f~-~~~~l---~p~k~~~iTNGI~~rrWl~~~NP~l~~li~~~~g~~~w~~~~~~l~~l~~ 526 (840)
|+.|++||+.|++++.+..++ ++..+ .+.++..|+|||+...| +|..++.+...+.
T Consensus 211 ad~v~~vS~~~~~~i~~~~~~~gl~~~~~~~~~ki~~I~NGid~~~~----~p~~~~~~~~~~~---------------- 270 (476)
T cd03791 211 ADAVTTVSPTYAREILTPEFGEGLDGLLRARAGKLSGILNGIDYDVW----NPATDPHLPANYS---------------- 270 (476)
T ss_pred cCcCeecCHhHHHHhCCCCCCcchHHHHHhccCCeEEEeCCCcCccc----CccccchhhhcCC----------------
Confidence 999999999999988865544 44443 35789999999999999 7888777766554
Q ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCceEeecccchhhhhhhhhhhHHHHHHHHHhhcCccccCCCCC
Q 003188 527 FADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTP 606 (840)
Q Consensus 527 ~~~d~~~~~~~~~~K~~nK~~L~~~i~~~~G~~~dp~~l~d~~vkR~heYKRq~Lnll~ii~~y~~ik~~~p~~~~~~~p 606 (840)
.++ + ..|..+|.+|. +++|++.+++.++++++.|+.++|+.++ ++.++.++.+ . +
T Consensus 271 -~~~------~-~~~~~~k~~l~----~~~g~~~~~~~~~i~~vGrl~~~Kg~~~-li~a~~~l~~--~----------~ 325 (476)
T cd03791 271 -ADD------L-EGKAENKAALQ----EELGLPVDPDAPLFGFVGRLTEQKGIDL-LLEALPELLE--L----------G 325 (476)
T ss_pred -ccc------c-ccHHHHHHHHH----HHcCCCcCCCCCEEEEEeeccccccHHH-HHHHHHHHHH--c----------C
Confidence 122 4 68889999887 5899888899999999999999999999 9888877643 1 5
Q ss_pred eEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcCCCCcceEEEEcCCCHHHHhhhccCccccccCCCCCccCCCcchhH
Q 003188 607 RTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMK 686 (840)
Q Consensus 607 ~~~If~GKA~P~y~~aK~iIk~I~~la~~in~d~~~~~~lkVvFl~nYnvslA~~ii~gaDv~l~iS~a~~EAsGTs~MK 686 (840)
.+|++.|++.+.+.. .+.++++. ..+ +|+|+.+|+.++++.++++||++++||+ +|+||++.|.
T Consensus 326 ~~lvi~G~g~~~~~~------~~~~~~~~------~~~--~v~~~~~~~~~~~~~~~~~aDv~l~pS~--~E~~gl~~lE 389 (476)
T cd03791 326 GQLVILGSGDPEYEE------ALRELAAR------YPG--RVAVLIGYDEALAHLIYAGADFFLMPSR--FEPCGLTQMY 389 (476)
T ss_pred cEEEEEecCCHHHHH------HHHHHHHh------CCC--cEEEEEeCCHHHHHHHHHhCCEEECCCC--CCCCcHHHHH
Confidence 799999999764432 45555543 245 7999999999999999999999999999 9999999999
Q ss_pred HhhcCceEeeecCchhHHHHHHhcCcceEeecCccccchhhhhhccCCCCCCChhHHHHHHHHhcCC-CCCCChHHHHHH
Q 003188 687 FSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAVAEQVPKLRKEREDGLFKPDPRFEEAKQFIRSGA-FGSYDYNPLLDS 765 (840)
Q Consensus 687 am~NGal~i~tlDGanvEi~~~vG~~N~~~fG~~~d~V~~~~~~~~y~~~~~~~~l~~v~~~~~~G~-f~~~~~~~l~~~ 765 (840)
||++|+++|+| .+|+ ..|.|.+.. +.. .-++|. |.+.+.++|.++
T Consensus 390 Ama~G~pvI~~----------~~gg--------~~e~v~~~~------~~~----------~~~~G~~~~~~~~~~l~~~ 435 (476)
T cd03791 390 AMRYGTVPIVR----------ATGG--------LADTVIDYN------EDT----------GEGTGFVFEGYNADALLAA 435 (476)
T ss_pred HhhCCCCCEEC----------cCCC--------ccceEeCCc------CCC----------CCCCeEEeCCCCHHHHHHH
Confidence 99999999977 4555 556665321 000 124674 677778888888
Q ss_pred HhhCCCCCCCccccccCChHHHHHHHHHHHHHhcCHHHHHHHHHHHhccCCCCChHHHHHHHHHHH
Q 003188 766 LEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYKDQKKWLKMSILSTAGSGKFSSDRTIAQYAKEI 831 (840)
Q Consensus 766 L~~~~~~~~~D~~~~~~Df~~y~~~~~~~~~~Y~d~~~W~~~~~~n~a~~g~FSsDrti~eYa~~i 831 (840)
|. ++...|.+++.|.+++.++++. .|||++++++|.+-.
T Consensus 436 i~-------------------------~~l~~~~~~~~~~~~~~~~~~~--~fsw~~~a~~~~~~y 474 (476)
T cd03791 436 LR-------------------------RALALYRDPEAWRKLQRNAMAQ--DFSWDRSAKEYLELY 474 (476)
T ss_pred HH-------------------------HHHHHHcCHHHHHHHHHHHhcc--CCChHHHHHHHHHHH
Confidence 86 8888899999999999999987 799999999997643
No 16
>PRK00654 glgA glycogen synthase; Provisional
Probab=100.00 E-value=1.2e-37 Score=355.35 Aligned_cols=442 Identities=19% Similarity=0.231 Sum_probs=319.1
Q ss_pred cCCCCCCcccchhhhHhhhhccCCCeEEEeeccCCccceEEeeCCceeeccccccccCCCcccccCCeeEEEEECCeEEE
Q 003188 134 AALGNGGLGRLASCFLDSMATLNLPAWGYGLRYRYGLFKQKITKQGQEEVAEDWLEKFSPWEVVRHDVVFPVRFFGSVMV 213 (840)
Q Consensus 134 ~~LgnGGLGrLAac~ldS~a~l~~p~~G~GlrY~~G~F~Q~i~dG~Q~E~pd~Wl~~~~pwe~~r~~~~~~V~f~g~~~~ 213 (840)
|-.-.||||.-.+..-++++.+|..+.-+.=+|.. +. +. .++ ..
T Consensus 12 P~~k~GGl~~~v~~L~~~L~~~G~~V~v~~p~y~~-~~-----~~----~~~----------~~---------------- 55 (466)
T PRK00654 12 PLIKTGGLGDVVGALPKALAALGHDVRVLLPGYPA-IR-----EK----LRD----------AQ---------------- 55 (466)
T ss_pred cCcccCcHHHHHHHHHHHHHHCCCcEEEEecCCcc-hh-----hh----hcC----------ce----------------
Confidence 44568999999999999999999988888766643 11 00 000 00
Q ss_pred cCCCceeeeCCeEEEEEEeeeccCCCCCCceEEEEEEEEEcCCCCccccccCcchhhhhHhhhhhhccccccccC-CCCc
Q 003188 214 NPNGTRKWVGGEVVQAVAYDIPIPGYKTKNTISLRLWDAKASAEDFNLFQFNDGQYESAAQLHSRAQQICAVLYP-GDST 292 (840)
Q Consensus 214 ~~~g~~~w~~~~~v~av~yd~pi~gy~~~~~~~lrLw~a~v~~~~~~l~~~~~~~y~~a~~~~~~~~~It~~LYp-~D~~ 292 (840)
.+..+ + ..++|......+++++++++++.|+. +..+|+ .|+.
T Consensus 56 ------------~~~~~--~------------~~~~~~~~~~~~gv~v~~v~~~~~~~-----------~~~~y~~~d~~ 98 (466)
T PRK00654 56 ------------VVGRL--D------------LFTVLFGHLEGDGVPVYLIDAPHLFD-----------RPSGYGYPDNG 98 (466)
T ss_pred ------------EEEEe--e------------eEEEEEEeEEcCCceEEEEeCHHHcC-----------CCCCCCCcChH
Confidence 00000 0 13344432222346677777777775 557887 3554
Q ss_pred hhhhhhhhhhhhHHHHhHHHHHHHHHHHcccCcccccCCCceEEEeCCCcccccHHHHHHHHHhhcCCChhHHhhhcCcc
Q 003188 293 EEGKLLRLKQQFFLCSASLQDMILRFKERKSGRQWSEFPSKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRT 372 (840)
Q Consensus 293 ~~Gk~lRL~Qeyfl~~a~lqdiir~~~~~~g~~~l~~l~~~~viHlNDtHpalaipElmR~l~d~~~l~~~~A~~i~~~~ 372 (840)
+ ++.||+.|+++.+ ++ .+ .+|++||+||||++++ +.+++... ..+ ..+..
T Consensus 99 ~--------r~~~f~~~~~~~~-~~---~~--------~~pDiiH~h~w~~~~~-~~~l~~~~-~~~--------~~~~~ 148 (466)
T PRK00654 99 E--------RFAFFSWAAAEFA-EG---LD--------PRPDIVHAHDWHTGLI-PALLKEKY-WRG--------YPDIK 148 (466)
T ss_pred H--------HHHHHHHHHHHHH-Hh---cC--------CCCceEEECCcHHHHH-HHHHHHhh-hcc--------CCCCC
Confidence 4 6779999998753 11 11 4789999999999997 55665432 111 13457
Q ss_pred EEEeecCChhhhHhhccHHHHHhhchhHHHHHHHHHHHHHHHHHHhcCCCcccccccccccCCCCCCcccccccccccCC
Q 003188 373 VAYTNHTVLPEALEKWSQAVMWKLLPRHMEIIEEIDKRFIAMVRSTRSDLESKIPSMCILDNNPKKPVVRMANLCVVSAH 452 (840)
Q Consensus 373 ~vfT~HT~~~eglE~w~~~l~~~lLPr~~~ii~~in~~f~~~~~~~~~~~~~~~~~~~iie~~~~~~~v~Ma~lai~~S~ 452 (840)
+|||+||+.++|. |+.+.+..+ +++++.+. ....+. ++.+|+++.++..|+
T Consensus 149 ~v~TiH~~~~~g~--~~~~~~~~~-----------------------~~~~~~~~-~~~~~~---~~~~~~~~~~~~~ad 199 (466)
T PRK00654 149 TVFTIHNLAYQGL--FPAEILGEL-----------------------GLPAEAFH-LEGLEF---YGQISFLKAGLYYAD 199 (466)
T ss_pred EEEEcCCCcCCCc--CCHHHHHHc-----------------------CCChHHcC-chhhhc---CCcccHHHHHHHhcC
Confidence 9999999999996 877766543 11111110 001111 236899999999999
Q ss_pred cccchhhhhHHHHHhhhhc-Cccc---cCCCCCcccccccCcccccccCChhhhHHHHhhcCccccccChhhHhhhhccC
Q 003188 453 TVNGVAQLHSDILKADLFA-DYVS---LWPNKLQNKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLLVGLRQFA 528 (840)
Q Consensus 453 ~VNgVS~lH~eilk~~~f~-~~~~---l~p~k~~~iTNGI~~rrWl~~~NP~l~~li~~~~g~~~w~~~~~~l~~l~~~~ 528 (840)
.|++||+.+++.+++..++ ++.+ ..++|+..|.||||...| ||..++.+...++ .
T Consensus 200 ~vitvS~~~~~ei~~~~~~~gl~~~~~~~~~ki~vI~NGid~~~~----~p~~~~~~~~~~~-----------------~ 258 (466)
T PRK00654 200 RVTTVSPTYAREITTPEFGYGLEGLLRARSGKLSGILNGIDYDIW----NPETDPLLAANYS-----------------A 258 (466)
T ss_pred cCeeeCHHHHHHhccccCCcChHHHHHhcccCceEecCCCCcccc----CCccCcccccccC-----------------h
Confidence 9999999999988766555 4432 346789999999999999 8988877777776 2
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCceEeecccchhhhhhhhhhhHHHHHHHHHhhcCccccCCCCCeE
Q 003188 529 DNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRT 608 (840)
Q Consensus 529 ~d~~~~~~~~~~K~~nK~~L~~~i~~~~G~~~dp~~l~d~~vkR~heYKRq~Lnll~ii~~y~~ik~~~p~~~~~~~p~~ 608 (840)
++ + +.|..+|++|. +++|++ +++.++++++.||.++|+.++ ++.++.++.+ . +.+
T Consensus 259 ~~------~-~~k~~~k~~l~----~~~gl~-~~~~~~i~~vGRl~~~KG~~~-li~a~~~l~~--~----------~~~ 313 (466)
T PRK00654 259 DD------L-EGKAENKRALQ----ERFGLP-DDDAPLFAMVSRLTEQKGLDL-VLEALPELLE--Q----------GGQ 313 (466)
T ss_pred hh------h-hchHHHHHHHH----HHhCCC-CCCCcEEEEeeccccccChHH-HHHHHHHHHh--c----------CCE
Confidence 23 5 58888998886 588987 457899999999999999999 9888877643 1 578
Q ss_pred EEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcCCCCcceEEEEcCCCHHHHhhhccCccccccCCCCCccCCCcchhHHh
Q 003188 609 IMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFS 688 (840)
Q Consensus 609 ~If~GKA~P~y~~aK~iIk~I~~la~~in~d~~~~~~lkVvFl~nYnvslA~~ii~gaDv~l~iS~a~~EAsGTs~MKam 688 (840)
++++|.+.+.+.. .+.++++. .++ +|+|..+|+.++++.++++||++++||+ +|+||++.|.||
T Consensus 314 lvivG~g~~~~~~------~l~~l~~~------~~~--~v~~~~g~~~~~~~~~~~~aDv~v~PS~--~E~~gl~~lEAm 377 (466)
T PRK00654 314 LVLLGTGDPELEE------AFRALAAR------YPG--KVGVQIGYDEALAHRIYAGADMFLMPSR--FEPCGLTQLYAL 377 (466)
T ss_pred EEEEecCcHHHHH------HHHHHHHH------CCC--cEEEEEeCCHHHHHHHHhhCCEEEeCCC--CCCchHHHHHHH
Confidence 9999998765443 35555553 344 7888899999999999999999999999 999999999999
Q ss_pred hcCceEeeecCchhHHHHHHhcCcceEeecCccccchhhhhhccCCCCCCChhHHHHHHHHhcCC-CCCCChHHHHHHHh
Q 003188 689 LNGCLIIGTLDGANVEIRQEIGEENFFLFGAVAEQVPKLRKEREDGLFKPDPRFEEAKQFIRSGA-FGSYDYNPLLDSLE 767 (840)
Q Consensus 689 ~NGal~i~tlDGanvEi~~~vG~~N~~~fG~~~d~V~~~~~~~~y~~~~~~~~l~~v~~~~~~G~-f~~~~~~~l~~~L~ 767 (840)
.+|+++|+| .+|| ..|.|.+.. +.. .-.+|+ |.+.+.++|.++|.
T Consensus 378 a~G~p~V~~----------~~gG--------~~e~v~~~~------~~~----------~~~~G~lv~~~d~~~la~~i~ 423 (466)
T PRK00654 378 RYGTLPIVR----------RTGG--------LADTVIDYN------PED----------GEATGFVFDDFNAEDLLRALR 423 (466)
T ss_pred HCCCCEEEe----------CCCC--------ccceeecCC------CCC----------CCCceEEeCCCCHHHHHHHHH
Confidence 999999977 5566 566664321 000 124674 67778889988886
Q ss_pred hCCCCCCCccccccCChHHHHHHHHHHHHHhcCHHHHHHHHHHHhccCCCCChHHHHHHHHHH
Q 003188 768 GNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYKDQKKWLKMSILSTAGSGKFSSDRTIAQYAKE 830 (840)
Q Consensus 768 ~~~~~~~~D~~~~~~Df~~y~~~~~~~~~~Y~d~~~W~~~~~~n~a~~g~FSsDrti~eYa~~ 830 (840)
++...|.+++.|.++..++++. .|||++++++|.+-
T Consensus 424 -------------------------~~l~~~~~~~~~~~~~~~~~~~--~fsw~~~a~~~~~l 459 (466)
T PRK00654 424 -------------------------RALELYRQPPLWRALQRQAMAQ--DFSWDKSAEEYLEL 459 (466)
T ss_pred -------------------------HHHHHhcCHHHHHHHHHHHhcc--CCChHHHHHHHHHH
Confidence 7888888999999999999876 89999999999753
No 17
>PLN02316 synthase/transferase
Probab=100.00 E-value=1.1e-35 Score=360.18 Aligned_cols=422 Identities=17% Similarity=0.232 Sum_probs=299.6
Q ss_pred CCCCcccchhhhHhhhhccCCCeEEEeeccCCccceEEeeCCceeeccccccccCCCcccccCCeeEEEEECCeEEEcCC
Q 003188 137 GNGGLGRLASCFLDSMATLNLPAWGYGLRYRYGLFKQKITKQGQEEVAEDWLEKFSPWEVVRHDVVFPVRFFGSVMVNPN 216 (840)
Q Consensus 137 gnGGLGrLAac~ldS~a~l~~p~~G~GlrY~~G~F~Q~i~dG~Q~E~pd~Wl~~~~pwe~~r~~~~~~V~f~g~~~~~~~ 216 (840)
=.||||.-.+..-++++.+|.-+.-+.-+|.. +....+.+ + ...+
T Consensus 602 KvGGLgDVV~sLp~ALa~~Gh~V~VitP~Y~~-i~~~~~~~------------------~-----~~~~----------- 646 (1036)
T PLN02316 602 KVGGLGDVVTSLSRAVQDLNHNVDIILPKYDC-LNLSHVKD------------------L-----HYQR----------- 646 (1036)
T ss_pred CcCcHHHHHHHHHHHHHHcCCEEEEEecCCcc-cchhhccc------------------c-----eEEE-----------
Confidence 37999999999999999999888777777762 11000000 0 0000
Q ss_pred CceeeeCCeEEEEEEeeeccCCCCCCceEEEEEEEEEcCCCCccccccCcc-hhhhhHhhhhhhccccccccC-CCCchh
Q 003188 217 GTRKWVGGEVVQAVAYDIPIPGYKTKNTISLRLWDAKASAEDFNLFQFNDG-QYESAAQLHSRAQQICAVLYP-GDSTEE 294 (840)
Q Consensus 217 g~~~w~~~~~v~av~yd~pi~gy~~~~~~~lrLw~a~v~~~~~~l~~~~~~-~y~~a~~~~~~~~~It~~LYp-~D~~~~ 294 (840)
.|. ..| ..+++|...++ ++++|++++. .++. +..+|+ .|+..
T Consensus 647 --------------~~~--~~~------~~~~v~~~~~~--GV~vyfl~~~~~~F~-----------r~~~Yg~~Dd~~- 690 (1036)
T PLN02316 647 --------------SYS--WGG------TEIKVWFGKVE--GLSVYFLEPQNGMFW-----------AGCVYGCRNDGE- 690 (1036)
T ss_pred --------------Eec--cCC------EEEEEEEEEEC--CcEEEEEeccccccC-----------CCCCCCchhHHH-
Confidence 000 011 12455555432 4566666653 3554 345776 35544
Q ss_pred hhhhhhhhhhHHHHhHHHHHHHHHHHcccCcccccCCCceEEEeCCCcccccHHHHHHHHHhhcCCChhHHhhhcCccEE
Q 003188 295 GKLLRLKQQFFLCSASLQDMILRFKERKSGRQWSEFPSKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTVA 374 (840)
Q Consensus 295 Gk~lRL~Qeyfl~~a~lqdiir~~~~~~g~~~l~~l~~~~viHlNDtHpalaipElmR~l~d~~~l~~~~A~~i~~~~~v 374 (840)
++.|||.|+++.+. + .+ +.|++||+||||+|++ +-+++......+ ..+..+|
T Consensus 691 -------RF~~F~~Aale~l~-~---~~--------~~PDIIHaHDW~talv-a~llk~~~~~~~--------~~~~p~V 742 (1036)
T PLN02316 691 -------RFGFFCHAALEFLL-Q---SG--------FHPDIIHCHDWSSAPV-AWLFKDHYAHYG--------LSKARVV 742 (1036)
T ss_pred -------HHHHHHHHHHHHHH-h---cC--------CCCCEEEECCChHHHH-HHHHHHhhhhhc--------cCCCCEE
Confidence 89999999998642 1 11 5789999999999997 566665433222 1345799
Q ss_pred EeecCChhhhHhhccHHHHHhhchhHHHHHHHHHHHHHHHHHHhcCCCcccccccccccCCCCCCcccccccccccCCcc
Q 003188 375 YTNHTVLPEALEKWSQAVMWKLLPRHMEIIEEIDKRFIAMVRSTRSDLESKIPSMCILDNNPKKPVVRMANLCVVSAHTV 454 (840)
Q Consensus 375 fT~HT~~~eglE~w~~~l~~~lLPr~~~ii~~in~~f~~~~~~~~~~~~~~~~~~~iie~~~~~~~v~Ma~lai~~S~~V 454 (840)
||+|++.+++ ++...++..|+.|
T Consensus 743 ~TiHnl~~~~---------------------------------------------------------n~lk~~l~~AD~V 765 (1036)
T PLN02316 743 FTIHNLEFGA---------------------------------------------------------NHIGKAMAYADKA 765 (1036)
T ss_pred EEeCCcccch---------------------------------------------------------hHHHHHHHHCCEE
Confidence 9999875322 1112356789999
Q ss_pred cchhhhhHHHHHhhhhcCcccc--CCCCCcccccccCcccccccCChhhhHHHHhhcCccccccChhhHhhhhccCCCHH
Q 003188 455 NGVAQLHSDILKADLFADYVSL--WPNKLQNKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLLVGLRQFADNTE 532 (840)
Q Consensus 455 NgVS~lH~eilk~~~f~~~~~l--~p~k~~~iTNGI~~rrWl~~~NP~l~~li~~~~g~~~w~~~~~~l~~l~~~~~d~~ 532 (840)
++||+.+++.+.+. ..+ .+.|+..|.||||+.+| ||..++++...++ ++|
T Consensus 766 iTVS~tya~EI~~~-----~~l~~~~~Kl~vI~NGID~~~w----~P~tD~~lp~~y~-----------------~~~-- 817 (1036)
T PLN02316 766 TTVSPTYSREVSGN-----SAIAPHLYKFHGILNGIDPDIW----DPYNDNFIPVPYT-----------------SEN-- 817 (1036)
T ss_pred EeCCHHHHHHHHhc-----cCcccccCCEEEEECCcccccc----CCcccccccccCC-----------------chh--
Confidence 99999999877642 122 24789999999999999 9999988887777 344
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCceEeecccchhhhhhhhhhhHHHHHHHHHhhcCccccCCCCCeEEEEE
Q 003188 533 LQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIG 612 (840)
Q Consensus 533 ~~~~~~~~K~~nK~~L~~~i~~~~G~~~dp~~l~d~~vkR~heYKRq~Lnll~ii~~y~~ik~~~p~~~~~~~p~~~If~ 612 (840)
+.+.|..||..|. +++|++ +++.+++++|.||+++|+.+| ++..+.++.+ . +.+||++
T Consensus 818 ----~~~gK~~~k~~Lr----~~lGL~-~~d~plVg~VGRL~~qKGvdl-Li~Al~~ll~--~----------~~qlVIv 875 (1036)
T PLN02316 818 ----VVEGKRAAKEALQ----QRLGLK-QADLPLVGIITRLTHQKGIHL-IKHAIWRTLE--R----------NGQVVLL 875 (1036)
T ss_pred ----hhhhhhhhHHHHH----HHhCCC-cccCeEEEEEeccccccCHHH-HHHHHHHHhh--c----------CcEEEEE
Confidence 3368999999987 589987 468899999999999999999 9988877653 1 5789999
Q ss_pred ecC-CcCCHHHHHHHHHHHHHHhhhcCCcCCCCcceEEEEcCCCHHHHhhhccCccccccCCCCCccCCCcchhHHhhcC
Q 003188 613 GKA-FATYTNAKRIVKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNG 691 (840)
Q Consensus 613 GKA-~P~y~~aK~iIk~I~~la~~in~d~~~~~~lkVvFl~nYnvslA~~ii~gaDv~l~iS~a~~EAsGTs~MKam~NG 691 (840)
|.| .|.+.. .+.++++.+.. .+++ +|.|...|+..+++.+++|||++++||+ +||||+++|.||.+|
T Consensus 876 G~Gpd~~~e~------~l~~La~~Lg~--~~~~--rV~f~g~~de~lah~iyaaADiflmPS~--~EP~GLvqLEAMa~G 943 (1036)
T PLN02316 876 GSAPDPRIQN------DFVNLANQLHS--SHHD--RARLCLTYDEPLSHLIYAGADFILVPSI--FEPCGLTQLTAMRYG 943 (1036)
T ss_pred eCCCCHHHHH------HHHHHHHHhCc--cCCC--eEEEEecCCHHHHHHHHHhCcEEEeCCc--ccCccHHHHHHHHcC
Confidence 987 443332 34555543210 2456 8999999999999999999999999999 999999999999999
Q ss_pred ceEeeecCchhHHHHHHhcCcceEeecCccccchhhhhhccCCCCCCChhHHHHHHHHhcCC-CCCCChHHHHHHHhhCC
Q 003188 692 CLIIGTLDGANVEIRQEIGEENFFLFGAVAEQVPKLRKEREDGLFKPDPRFEEAKQFIRSGA-FGSYDYNPLLDSLEGNT 770 (840)
Q Consensus 692 al~i~tlDGanvEi~~~vG~~N~~~fG~~~d~V~~~~~~~~y~~~~~~~~l~~v~~~~~~G~-f~~~~~~~l~~~L~~~~ 770 (840)
+++|.| .+|| +.|+|.+.+. ...... ......+|+ |.+.+..+|..+|.
T Consensus 944 tppVvs----------~vGG--------L~DtV~d~d~------~~~~~~---~~g~~~tGflf~~~d~~aLa~AL~--- 993 (1036)
T PLN02316 944 SIPVVR----------KTGG--------LFDTVFDVDH------DKERAQ---AQGLEPNGFSFDGADAAGVDYALN--- 993 (1036)
T ss_pred CCeEEE----------cCCC--------cHhhcccccc------cccccc---ccccCCceEEeCCCCHHHHHHHHH---
Confidence 999966 7777 7888875421 000000 000125785 88888999999987
Q ss_pred CCCCCccccccCChHHHHHHHHHHHHHhcC-HHHHHHHHHHHhccCCCCChHHHHHHHHHH
Q 003188 771 GYGRGDYFLVGYDFPSYLEAQDRVDQAYKD-QKKWLKMSILSTAGSGKFSSDRTIAQYAKE 830 (840)
Q Consensus 771 ~~~~~D~~~~~~Df~~y~~~~~~~~~~Y~d-~~~W~~~~~~n~a~~g~FSsDrti~eYa~~ 830 (840)
++...|.+ +..|.+++.+.|.. +|||++++++|.+-
T Consensus 994 ----------------------raL~~~~~~~~~~~~~~r~~m~~--dFSW~~~A~~Y~~L 1030 (1036)
T PLN02316 994 ----------------------RAISAWYDGRDWFNSLCKRVMEQ--DWSWNRPALDYMEL 1030 (1036)
T ss_pred ----------------------HHHhhhhhhHHHHHHHHHHHHHh--hCCHHHHHHHHHHH
Confidence 88888754 55568888888887 89999999999753
No 18
>PF08323 Glyco_transf_5: Starch synthase catalytic domain; InterPro: IPR013534 This region represents the catalytic domain of glycogen (or starch) synthases that use ADP-glucose (2.4.1.21 from EC), rather than UDP-glucose (2.4.1.11 from EC) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.; PDB: 2BIS_C 3L01_A 3FRO_A 2R4U_A 2R4T_A 3D1J_A 3COP_A 3GUH_A 2QZS_A 3CX4_A ....
Probab=99.81 E-value=1.6e-20 Score=198.64 Aligned_cols=226 Identities=15% Similarity=0.190 Sum_probs=140.5
Q ss_pred CCCCCcccchhhhHhhhhccCCCeEEEeeccCCccceEEeeCCceee-ccccccccCCCcccccCCeeEEEEECCeEEEc
Q 003188 136 LGNGGLGRLASCFLDSMATLNLPAWGYGLRYRYGLFKQKITKQGQEE-VAEDWLEKFSPWEVVRHDVVFPVRFFGSVMVN 214 (840)
Q Consensus 136 LgnGGLGrLAac~ldS~a~l~~p~~G~GlrY~~G~F~Q~i~dG~Q~E-~pd~Wl~~~~pwe~~r~~~~~~V~f~g~~~~~ 214 (840)
.-.||||..++..-++++.+|..+.-+--+|. ..+... .|.+ ..+ ..+.+.|
T Consensus 13 ~k~GGLgdv~~~L~kaL~~~G~~V~Vi~P~y~--~~~~~~---~~~~~~~~-----------------~~~~~~~----- 65 (245)
T PF08323_consen 13 AKVGGLGDVVGSLPKALAKQGHDVRVIMPKYG--FIDEEY---FQLEPVRR-----------------LSVPFGG----- 65 (245)
T ss_dssp B-SSHHHHHHHHHHHHHHHTT-EEEEEEE-TH--HHHHHC---TTEEEEEE-----------------ES-STTC-----
T ss_pred cccCcHhHHHHHHHHHHHhcCCeEEEEEccch--hhhhhh---hcceEEEE-----------------ecccccc-----
Confidence 57899999999999999999999988888772 222111 0110 000 0001110
Q ss_pred CCCceeeeCCeEEEEEEeeeccCCCCCCceEEEEEEEEEcCCCCccccccCcchhhhhHhhhhhhccccccccCCC-Cch
Q 003188 215 PNGTRKWVGGEVVQAVAYDIPIPGYKTKNTISLRLWDAKASAEDFNLFQFNDGQYESAAQLHSRAQQICAVLYPGD-STE 293 (840)
Q Consensus 215 ~~g~~~w~~~~~v~av~yd~pi~gy~~~~~~~lrLw~a~v~~~~~~l~~~~~~~y~~a~~~~~~~~~It~~LYp~D-~~~ 293 (840)
. ++.++ . ..+++|+... +.+++++++++.|++ +..+|++. ..+
T Consensus 66 -----------~---v~~~~-~--------~~~~v~~~~~--~~v~v~~i~~~~~f~-----------r~~iY~~~~~~~ 109 (245)
T PF08323_consen 66 -----------P---VPVGV-W--------YEVRVYRYPV--DGVPVYFIDNPEYFD-----------RPGIYGDNGGDY 109 (245)
T ss_dssp -----------E---EEEE-------------EEEEEEEE--TTEEEEEEESHHHHG-----------SSSSSBSTSSBH
T ss_pred -----------c---ccccc-c--------eEEEEEEEEc--CCccEEEecChhhcc-----------ccceeccCCCcc
Confidence 0 11111 0 3457888864 378899999999887 77799751 111
Q ss_pred hhhhhhhhhhhHHHHhHHHHHHHHHHHcccCcccccC-CCceEEEeCCCcccccHHHHHHHHHhhcCCChhHHhhhcCcc
Q 003188 294 EGKLLRLKQQFFLCSASLQDMILRFKERKSGRQWSEF-PSKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRT 372 (840)
Q Consensus 294 ~Gk~lRL~Qeyfl~~a~lqdiir~~~~~~g~~~l~~l-~~~~viHlNDtHpalaipElmR~l~d~~~l~~~~A~~i~~~~ 372 (840)
.. -..++.||+.|+++-+ +.+ ++|++|||||||+|++ |-++|.... .+..+ .+..
T Consensus 110 ~d---~~~rf~~fs~a~le~~-------------~~l~~~pDIIH~hDW~tal~-p~~lk~~~~-----~~~~~--~~~~ 165 (245)
T PF08323_consen 110 PD---NAERFAFFSRAALELL-------------KKLGWKPDIIHCHDWHTALA-PLYLKERYQ-----QDPFF--ANIP 165 (245)
T ss_dssp TT---HHHHHHHHHHHHHHHH-------------CTCT-S-SEEEEECGGGTTH-HHHHHHCCS-----S--------SE
T ss_pred hh---HHHHHHHHHHHHHHHH-------------HhhCCCCCEEEecCchHHHH-HHHhccccc-----ccccc--ccce
Confidence 11 2237889999999753 333 6899999999999998 677776432 12222 3567
Q ss_pred EEEeecCChhhhHhhccHHHHHhhchhHHHHHHHHHHHHHHHHHHhcCCCcccccccccccCCCCCCcccccccccccCC
Q 003188 373 VAYTNHTVLPEALEKWSQAVMWKLLPRHMEIIEEIDKRFIAMVRSTRSDLESKIPSMCILDNNPKKPVVRMANLCVVSAH 452 (840)
Q Consensus 373 ~vfT~HT~~~eglE~w~~~l~~~lLPr~~~ii~~in~~f~~~~~~~~~~~~~~~~~~~iie~~~~~~~v~Ma~lai~~S~ 452 (840)
++||+||+.+||. ||.+.+.. +++++..+......+. ++.+||++.||..|+
T Consensus 166 ~v~TIHN~~yqg~--~~~~~~~~-----------------------~gl~~~~~~~~~~~~~---~~~in~lk~gi~~AD 217 (245)
T PF08323_consen 166 TVFTIHNLEYQGI--FPPEDLKA-----------------------LGLPDEYFQNLDEYEF---YGQINFLKAGIVYAD 217 (245)
T ss_dssp EEEEESSTT---E--EEGGGGGC-----------------------TT-GGGGS-STTTTEE---TTEEEHHHHHHHHSS
T ss_pred eEEEEcccccCCc--CCHHHHHH-----------------------cCCCHHHhcccccccc---ccccCHHHHHHHhcC
Confidence 9999999999998 88765532 2333332222222232 358999999999999
Q ss_pred cccchhhhhHHHHHhhhhc-Ccccc
Q 003188 453 TVNGVAQLHSDILKADLFA-DYVSL 476 (840)
Q Consensus 453 ~VNgVS~lH~eilk~~~f~-~~~~l 476 (840)
+||+||+.|+++++++.|+ |+.++
T Consensus 218 ~v~TVS~~Ya~Ei~~~~~g~GL~~~ 242 (245)
T PF08323_consen 218 KVTTVSPTYAREIQTPEFGEGLEGL 242 (245)
T ss_dssp EEEESSHHHHHHTTSHHHHTT-HHH
T ss_pred EeeeCCHHHHHHHhCcccCCChHHH
Confidence 9999999999999988877 66654
No 19
>cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis. GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity.
Probab=99.61 E-value=4.4e-14 Score=163.79 Aligned_cols=209 Identities=19% Similarity=0.235 Sum_probs=144.2
Q ss_pred cccccccccccCCcccchhhhhHHHHHhhhhcCccccCCCCCcccccccCcccccccCChhhhHHHHhhcCccccccChh
Q 003188 440 VVRMANLCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLD 519 (840)
Q Consensus 440 ~v~Ma~lai~~S~~VNgVS~lH~eilk~~~f~~~~~l~p~k~~~iTNGI~~rrWl~~~NP~l~~li~~~~g~~~w~~~~~ 519 (840)
+..|=..+...|+.+++||+.-+.+++. +.+.-|++ =|-|||++..|- ..
T Consensus 216 r~~iE~~aa~~Ad~fttVS~it~~E~~~-----Ll~~~pd~--ViPNGid~~~f~-----~~------------------ 265 (590)
T cd03793 216 RYCIERAAAHCAHVFTTVSEITAYEAEH-----LLKRKPDV--VLPNGLNVKKFS-----AL------------------ 265 (590)
T ss_pred HHHHHHHHHhhCCEEEECChHHHHHHHH-----HhCCCCCE--EeCCCcchhhcc-----cc------------------
Confidence 3456668999999999999998888874 34555666 456999999882 11
Q ss_pred hHhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHh-C-CCCCCCCceEee-cccchh-hhhhhhhhhHHHHHHHHHhh
Q 003188 520 LLVGLRQFADNTELQAEWESAKMASKKHLADYIWRVT-G-VTIDPNSLFDIQ-VKRIHE-YKRQLLNILGAIYRYKKLKE 595 (840)
Q Consensus 520 ~l~~l~~~~~d~~~~~~~~~~K~~nK~~L~~~i~~~~-G-~~~dp~~l~d~~-vkR~he-YKRq~Lnll~ii~~y~~ik~ 595 (840)
.+ +...|..+|+++.++++..+ | ..++|+.++..+ +.|+.- .||.++ ++..+.++.+...
T Consensus 266 ---------~e------~~~~~~~~k~ki~~f~~~~~~~~~~~~~d~tli~f~~GR~e~~nKGiDv-lIeAl~rLn~~l~ 329 (590)
T cd03793 266 ---------HE------FQNLHAQSKEKINEFVRGHFYGHYDFDLDKTLYFFTAGRYEFSNKGADM-FLEALARLNYLLK 329 (590)
T ss_pred ---------hh------hhhhhHHhhhhhhHHHHHHHhhhcCCCCCCeEEEEEeeccccccCCHHH-HHHHHHHHHHHHH
Confidence 12 44688999999999864432 2 246777777777 799987 999999 9999999987543
Q ss_pred cCccccCCCCCeE-EEEEecCC-------cCCHHHHHHHHHHHHHHhhhcCC----------------------------
Q 003188 596 MSPQERKKTTPRT-IMIGGKAF-------ATYTNAKRIVKLVNDVGEVVNTD---------------------------- 639 (840)
Q Consensus 596 ~~p~~~~~~~p~~-~If~GKA~-------P~y~~aK~iIk~I~~la~~in~d---------------------------- 639 (840)
.... +.+=+. +||-++.. -+...-|++-.-+.++.+.|.+.
T Consensus 330 -~~~~--~~tVvafii~p~~~~~~~~~~l~g~~~~~~l~~~~~~i~~~i~~~~~~~~l~~~~~~~~~~~~~~~~~~~kr~ 406 (590)
T cd03793 330 -VEGS--DTTVVAFFIMPAKTNNFNVESLKGQAVRKQLRDTVNSVKEKIGKRLFEAALKGKLPDLEELLDKEDKVMLKRR 406 (590)
T ss_pred -hcCC--CCeEEEEEEecCccCCcCHHhhcchHHHHHHHHHHHHHHHHhhhhhhhHhhccCCCChhhhcchhhHHHHHHH
Confidence 2111 112122 34555532 12233333433444433333222
Q ss_pred ----------c-------------------------CCCCcceEEEEcCC--------CHHHHhhhccCccccccCCCCC
Q 003188 640 ----------P-------------------------EVNSYLKVVFVPNY--------NVSVAELLIPGSELSQHISTAG 676 (840)
Q Consensus 640 ----------~-------------------------~~~~~lkVvFl~nY--------nvslA~~ii~gaDv~l~iS~a~ 676 (840)
| .-.++.||+|+|.| +++. +.++.|||++..||.
T Consensus 407 ~~~~~~~~~~p~~tH~~~~~~~D~il~~~r~~~l~N~~~drVkvif~P~~L~~~~~~~g~~y-~E~~~g~dl~v~PS~-- 483 (590)
T cd03793 407 IFALQRHSLPPVVTHNMVDDANDPILNHIRRIQLFNSPEDRVKVVFHPEFLSSTNPLLGLDY-EEFVRGCHLGVFPSY-- 483 (590)
T ss_pred HHhhccCCCCCeeeecCCcCccCHHHHHHHHhcCcCCCCCeEEEEEcccccCCCCCcCCcch-HHHhhhceEEEeccc--
Confidence 1 12457999999987 5543 456899999999999
Q ss_pred ccCCCcchhHHhhcCceEeeecCc
Q 003188 677 MEASGTSNMKFSLNGCLIIGTLDG 700 (840)
Q Consensus 677 ~EAsGTs~MKam~NGal~i~tlDG 700 (840)
+|+.|..-+-||.-|++.|+|--+
T Consensus 484 yE~fG~~~lEAma~G~PvI~t~~~ 507 (590)
T cd03793 484 YEPWGYTPAECTVMGIPSITTNLS 507 (590)
T ss_pred cCCCCcHHHHHHHcCCCEEEccCc
Confidence 999999999999999999988553
No 20
>TIGR02470 sucr_synth sucrose synthase. This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria.
Probab=99.60 E-value=3.5e-14 Score=170.43 Aligned_cols=194 Identities=14% Similarity=0.125 Sum_probs=136.4
Q ss_pred HHhCCCCCCCCceEeecccchhhhhhhhhhhHHHHHHHHHhhcCccccCCCCCeEEEEEecC-Cc---CCHHHHHHHHHH
Q 003188 554 RVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKA-FA---TYTNAKRIVKLV 629 (840)
Q Consensus 554 ~~~G~~~dp~~l~d~~vkR~heYKRq~Lnll~ii~~y~~ik~~~p~~~~~~~p~~~If~GKA-~P---~y~~aK~iIk~I 629 (840)
+.+|+..+|+.+++++|.|+...|+.+. ++..+.+..++.. ..++|+.|.+ .+ .+...+..++.+
T Consensus 540 ~~~G~l~d~~kpiIl~VGRL~~~KGid~-LIeA~~~l~~l~~----------~~~LVIVGGg~~~~~s~d~ee~~~i~~L 608 (784)
T TIGR02470 540 EHYGYLKDPNKPIIFSMARLDRVKNLTG-LVECYGRSPKLRE----------LVNLVVVAGKLDAKESKDREEQAEIEKM 608 (784)
T ss_pred HHhCCCCCCCCcEEEEEeCCCccCCHHH-HHHHHHHhHhhCC----------CeEEEEEeCCcccccccchhHHHHHHHH
Confidence 4678877899999999999999999998 8877665544321 3455555533 21 233444556666
Q ss_pred HHHHhhhcCCcCCCCcceEEEEcCC-----CHHHHhhhccCccccccCCCCCccCCCcchhHHhhcCceEeeecCchhHH
Q 003188 630 NDVGEVVNTDPEVNSYLKVVFVPNY-----NVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVE 704 (840)
Q Consensus 630 ~~la~~in~d~~~~~~lkVvFl~nY-----nvslA~~ii~gaDv~l~iS~a~~EAsGTs~MKam~NGal~i~tlDGanvE 704 (840)
.++++.. .+.+ +|.|+--- .-++.+.+-.++|++.+||+ +|++|...+-||..|.++|+|-.|..-|
T Consensus 609 ~~la~~~----gL~g--~V~flG~~~~~~~~~elyr~iAd~adVfV~PS~--~EpFGLvvLEAMAcGlPVVAT~~GG~~E 680 (784)
T TIGR02470 609 HNLIDQY----QLHG--QIRWIGAQLNRVRNGELYRYIADTKGIFVQPAL--YEAFGLTVLEAMTCGLPTFATRFGGPLE 680 (784)
T ss_pred HHHHHHh----CCCC--eEEEccCcCCcccHHHHHHHhhccCcEEEECCc--ccCCCHHHHHHHHcCCCEEEcCCCCHHH
Confidence 6666643 2667 78875421 12334444457899999999 9999999999999999999997777655
Q ss_pred HHHHhcCcceEeecCccccchhhhhhccCCCCCCChhHHHHHHHHhcCCCCCCChHHHHHHHhhCCCCCCCccccccCCh
Q 003188 705 IRQEIGEENFFLFGAVAEQVPKLRKEREDGLFKPDPRFEEAKQFIRSGAFGSYDYNPLLDSLEGNTGYGRGDYFLVGYDF 784 (840)
Q Consensus 705 i~~~vG~~N~~~fG~~~d~V~~~~~~~~y~~~~~~~~l~~v~~~~~~G~f~~~~~~~l~~~L~~~~~~~~~D~~~~~~Df 784 (840)
|++. +.|+|+| .+.+.+++.++|.
T Consensus 681 iV~d--g~tGfLV-------------------------------------dp~D~eaLA~aL~----------------- 704 (784)
T TIGR02470 681 IIQD--GVSGFHI-------------------------------------DPYHGEEAAEKIV----------------- 704 (784)
T ss_pred HhcC--CCcEEEe-------------------------------------CCCCHHHHHHHHH-----------------
Confidence 5543 2334333 3445677777765
Q ss_pred HHHHHHHHHHH-HHhcCHHHHHHHHHHHhccC-CCCChHHHHHHHHHH
Q 003188 785 PSYLEAQDRVD-QAYKDQKKWLKMSILSTAGS-GKFSSDRTIAQYAKE 830 (840)
Q Consensus 785 ~~y~~~~~~~~-~~Y~d~~~W~~~~~~n~a~~-g~FSsDrti~eYa~~ 830 (840)
++. ....|++.|.+++.+++... -.|||++++++|.+-
T Consensus 705 --------~ll~kll~dp~~~~~ms~~a~~rV~~~FSW~~~A~~ll~l 744 (784)
T TIGR02470 705 --------DFFEKCDEDPSYWQKISQGGLQRIYEKYTWKIYSERLLTL 744 (784)
T ss_pred --------HHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 443 35679999999999988754 489999999999764
No 21
>PLN00142 sucrose synthase
Probab=99.50 E-value=9.3e-13 Score=158.49 Aligned_cols=194 Identities=12% Similarity=0.087 Sum_probs=137.5
Q ss_pred HhCCCCCCCCceEeecccchhhhhhhhhhhHHHHHHHHHhhcCccccCCCCCeEEEEEecC-CcC---CHHHHHHHHHHH
Q 003188 555 VTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKA-FAT---YTNAKRIVKLVN 630 (840)
Q Consensus 555 ~~G~~~dp~~l~d~~vkR~heYKRq~Lnll~ii~~y~~ik~~~p~~~~~~~p~~~If~GKA-~P~---y~~aK~iIk~I~ 630 (840)
.+|+..+++.++++++.||..+|+.+. ++..+.+..++. ....+++.|.+ .|. +......++.+.
T Consensus 564 ~lg~l~~~~kpvIl~VGRL~~~KGid~-LIeA~a~l~~l~----------~~~~LVIVGgg~d~~~s~d~ee~~el~~L~ 632 (815)
T PLN00142 564 HIGYLKDRKKPIIFSMARLDRVKNLTG-LVEWYGKNKRLR----------ELVNLVVVGGFIDPSKSKDREEIAEIKKMH 632 (815)
T ss_pred HhCCccCCCCcEEEEEecCcccCCHHH-HHHHHHHHHHhC----------CCcEEEEEECCccccccccHHHHHHHHHHH
Confidence 567656788899999999999999998 888877664431 13677777655 442 222333445555
Q ss_pred HHHhhhcCCcCCCCcceEEEEcC---C--CHHHHhhhccCccccccCCCCCccCCCcchhHHhhcCceEeeecCchhHHH
Q 003188 631 DVGEVVNTDPEVNSYLKVVFVPN---Y--NVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEI 705 (840)
Q Consensus 631 ~la~~in~d~~~~~~lkVvFl~n---Y--nvslA~~ii~gaDv~l~iS~a~~EAsGTs~MKam~NGal~i~tlDGanvEi 705 (840)
++++.. .+.+ +|.|+.. + +-++.+.+..++|++.+||+ +|++|+.-+-||..|.+.|+|-.|..-||
T Consensus 633 ~La~~l----gL~~--~V~flG~~~~~~~~~eLyr~iadaaDVfVlPS~--~EgFGLvvLEAMA~GlPVVATdvGG~~EI 704 (815)
T PLN00142 633 SLIEKY----NLKG--QFRWIAAQTNRVRNGELYRYIADTKGAFVQPAL--YEAFGLTVVEAMTCGLPTFATCQGGPAEI 704 (815)
T ss_pred HHHHHc----CCCC--cEEEcCCcCCcccHHHHHHHHHhhCCEEEeCCc--ccCCCHHHHHHHHcCCCEEEcCCCCHHHH
Confidence 555543 3667 7888743 2 24566666668899999999 99999999999999999999977776665
Q ss_pred HHHhcCcceEeecCccccchhhhhhccCCCCCCChhHHHHHHHHhcCCCCCCChHHHHHHHhhCCCCCCCccccccCChH
Q 003188 706 RQEIGEENFFLFGAVAEQVPKLRKEREDGLFKPDPRFEEAKQFIRSGAFGSYDYNPLLDSLEGNTGYGRGDYFLVGYDFP 785 (840)
Q Consensus 706 ~~~vG~~N~~~fG~~~d~V~~~~~~~~y~~~~~~~~l~~v~~~~~~G~f~~~~~~~l~~~L~~~~~~~~~D~~~~~~Df~ 785 (840)
++. ++|+|++ .+.+.+++.++|.
T Consensus 705 V~d--G~tG~LV-------------------------------------~P~D~eaLA~aI~------------------ 727 (815)
T PLN00142 705 IVD--GVSGFHI-------------------------------------DPYHGDEAANKIA------------------ 727 (815)
T ss_pred hcC--CCcEEEe-------------------------------------CCCCHHHHHHHHH------------------
Confidence 543 2344433 3444566666664
Q ss_pred HHHHHHHHH-HHHhcCHHHHHHHHHHHhccC-CCCChHHHHHHHHHHH
Q 003188 786 SYLEAQDRV-DQAYKDQKKWLKMSILSTAGS-GKFSSDRTIAQYAKEI 831 (840)
Q Consensus 786 ~y~~~~~~~-~~~Y~d~~~W~~~~~~n~a~~-g~FSsDrti~eYa~~i 831 (840)
++ ...+.|++.|.++..++..+. -.|||++++++|.+-+
T Consensus 728 -------~lLekLl~Dp~lr~~mg~~Ar~rv~e~FSWe~~A~rll~L~ 768 (815)
T PLN00142 728 -------DFFEKCKEDPSYWNKISDAGLQRIYECYTWKIYAERLLTLG 768 (815)
T ss_pred -------HHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 33 345789999999999887764 4899999999998743
No 22
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=99.38 E-value=8.2e-12 Score=153.21 Aligned_cols=274 Identities=13% Similarity=0.122 Sum_probs=166.4
Q ss_pred ccccccccccCCcccchhhhhHHHHHhhhhcCccc------------------cCCCCCcccccccCcccccccCChhhh
Q 003188 441 VRMANLCVVSAHTVNGVAQLHSDILKADLFADYVS------------------LWPNKLQNKTNGITPRRWLRFCNPELS 502 (840)
Q Consensus 441 v~Ma~lai~~S~~VNgVS~lH~eilk~~~f~~~~~------------------l~p~k~~~iTNGI~~rrWl~~~NP~l~ 502 (840)
+..-.+++..|+.|-++|+--.+.+. ..|.++.. .+..++.=|-|||++.++ .|.-.
T Consensus 372 i~~Ee~~l~~Ad~VIasT~qE~~eq~-~lY~~~~~~~~~~~~~~~~~gv~~~g~~~~ri~VIPpGVD~~~F----~P~~~ 446 (1050)
T TIGR02468 372 IEAEELSLDASEIVITSTRQEIEEQW-GLYDGFDVILERKLRARARRGVSCYGRFMPRMAVIPPGMEFSHI----VPHDG 446 (1050)
T ss_pred HHHHHHHHHhcCEEEEeCHHHHHHHH-HHhccCCchhhhhhhhhhcccccccccCCCCeEEeCCCCcHHHc----cCCCc
Confidence 34446678889999999986665443 24443331 223488889999999999 35211
Q ss_pred HHHHhhcCccccccChhhHhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCceEeecccchhhhhhhhh
Q 003188 503 KIITKWLKTDQWVTNLDLLVGLRQFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQVKRIHEYKRQLLN 582 (840)
Q Consensus 503 ~li~~~~g~~~w~~~~~~l~~l~~~~~d~~~~~~~~~~K~~nK~~L~~~i~~~~G~~~dp~~l~d~~vkR~heYKRq~Ln 582 (840)
+.-.+..| ++... ...++.. + .. | .+++ .+|+.+++.+|.|+...|+.+.
T Consensus 447 ~~~~~~~~----------~~~~~-~~~~~~~---~----~~----l-----~r~~--~~pdkpvIL~VGRL~p~KGi~~- 496 (1050)
T TIGR02468 447 DMDGETEG----------NEEHP-AKPDPPI---W----SE----I-----MRFF--TNPRKPMILALARPDPKKNITT- 496 (1050)
T ss_pred cccchhcc----------ccccc-ccccchh---h----HH----H-----Hhhc--ccCCCcEEEEEcCCccccCHHH-
Confidence 10000000 00000 0111111 1 11 1 1223 2588899999999999999999
Q ss_pred hhHHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHH---HHHHHHHHHHHHhhhcCCcCCCCcceEEEEcCC-CHHH
Q 003188 583 ILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTN---AKRIVKLVNDVGEVVNTDPEVNSYLKVVFVPNY-NVSV 658 (840)
Q Consensus 583 ll~ii~~y~~ik~~~p~~~~~~~p~~~If~GKA~P~y~~---aK~iIk~I~~la~~in~d~~~~~~lkVvFl~nY-nvsl 658 (840)
++..+.++.++.. . ...++| +|.+...... .....+.+..+++.. .+.+ +|.|+.-- ...+
T Consensus 497 LIeAf~~L~~l~~-~-------~nL~LI-iG~gdd~d~l~~~~~~~l~~L~~li~~l----gL~g--~V~FlG~v~~edv 561 (1050)
T TIGR02468 497 LVKAFGECRPLRE-L-------ANLTLI-MGNRDDIDEMSSGSSSVLTSVLKLIDKY----DLYG--QVAYPKHHKQSDV 561 (1050)
T ss_pred HHHHHHHhHhhcc-C-------CCEEEE-EecCchhhhhhccchHHHHHHHHHHHHh----CCCC--eEEecCCCCHHHH
Confidence 9888877755322 1 134444 4544322111 111222333333332 2667 77776432 2344
Q ss_pred HhhhccCc----cccccCCCCCccCCCcchhHHhhcCceEeeecCchhHHHHHHhcCcceEeecCccccchhhhhhccCC
Q 003188 659 AELLIPGS----ELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAVAEQVPKLRKEREDG 734 (840)
Q Consensus 659 A~~ii~ga----Dv~l~iS~a~~EAsGTs~MKam~NGal~i~tlDGanvEi~~~vG~~N~~~fG~~~d~V~~~~~~~~y~ 734 (840)
+ .++.+| ||+.+||+ +|+-|+.-+=||..|.+.|+|-.|...||++. ++|+++|
T Consensus 562 p-~lYr~Ad~s~DVFV~PS~--~EgFGLvlLEAMAcGlPVVASdvGG~~EII~~--g~nGlLV----------------- 619 (1050)
T TIGR02468 562 P-DIYRLAAKTKGVFINPAF--IEPFGLTLIEAAAHGLPMVATKNGGPVDIHRV--LDNGLLV----------------- 619 (1050)
T ss_pred H-HHHHHhhhcCCeeeCCcc--cCCCCHHHHHHHHhCCCEEEeCCCCcHHHhcc--CCcEEEE-----------------
Confidence 4 445444 79999999 99999999999999999999988887776653 3455554
Q ss_pred CCCCChhHHHHHHHHhcCCCCCCChHHHHHHHhhCCCCCCCccccccCChHHHHHHHHHHHHHhcCHHHHHHHHHHHhcc
Q 003188 735 LFKPDPRFEEAKQFIRSGAFGSYDYNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYKDQKKWLKMSILSTAG 814 (840)
Q Consensus 735 ~~~~~~~l~~v~~~~~~G~f~~~~~~~l~~~L~~~~~~~~~D~~~~~~Df~~y~~~~~~~~~~Y~d~~~W~~~~~~n~a~ 814 (840)
.+.+.++|.++|. .+..|++.|.++..++...
T Consensus 620 --------------------dP~D~eaLA~AL~----------------------------~LL~Dpelr~~m~~~gr~~ 651 (1050)
T TIGR02468 620 --------------------DPHDQQAIADALL----------------------------KLVADKQLWAECRQNGLKN 651 (1050)
T ss_pred --------------------CCCCHHHHHHHHH----------------------------HHhhCHHHHHHHHHHHHHH
Confidence 2223455555443 3456888888888776655
Q ss_pred CCCCChHHHHHHHHHHHhcc
Q 003188 815 SGKFSSDRTIAQYAKEIWNI 834 (840)
Q Consensus 815 ~g~FSsDrti~eYa~~iw~~ 834 (840)
.-.|||++++++|.+.+=.+
T Consensus 652 v~~FSWe~ia~~yl~~i~~~ 671 (1050)
T TIGR02468 652 IHLFSWPEHCKTYLSRIASC 671 (1050)
T ss_pred HHHCCHHHHHHHHHHHHHHH
Confidence 45799999999999876544
No 23
>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family. This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor.
Probab=99.38 E-value=2.6e-11 Score=133.39 Aligned_cols=242 Identities=17% Similarity=0.183 Sum_probs=158.4
Q ss_pred ccccccCCcccchhhhhHHHHHhhhhcCccccCCCCCcccccccCcccccccCChhhhHHHHhhcCccccccChhhHhhh
Q 003188 445 NLCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLLVGL 524 (840)
Q Consensus 445 ~lai~~S~~VNgVS~lH~eilk~~~f~~~~~l~p~k~~~iTNGI~~rrWl~~~NP~l~~li~~~~g~~~w~~~~~~l~~l 524 (840)
..++..++.|.+||+-..+.++.. |+ ++-+.++.-|-||++...| .|.
T Consensus 139 ~~~~~~ad~vi~~S~~~~~~~~~~-~~---~~~~~~i~vi~ng~~~~~~----~~~------------------------ 186 (388)
T TIGR02149 139 KTAIEAADRVIAVSGGMREDILKY-YP---DLDPEKVHVIYNGIDTKEY----KPD------------------------ 186 (388)
T ss_pred HHHHhhCCEEEEccHHHHHHHHHH-cC---CCCcceEEEecCCCChhhc----CCC------------------------
Confidence 445667899999999766655432 21 2335678888999998877 221
Q ss_pred hccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCceEeecccchhhhhhhhhhhHHHHHHHHHhhcCccccCCC
Q 003188 525 RQFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKT 604 (840)
Q Consensus 525 ~~~~~d~~~~~~~~~~K~~nK~~L~~~i~~~~G~~~dp~~l~d~~vkR~heYKRq~Lnll~ii~~y~~ik~~~p~~~~~~ 604 (840)
+. ..+ ++++|+ +++.+..+++.|+..+|+.++ ++..+.++. .
T Consensus 187 ----~~---------------~~~----~~~~~~--~~~~~~i~~~Grl~~~Kg~~~-li~a~~~l~---~--------- 228 (388)
T TIGR02149 187 ----DG---------------NVV----LDRYGI--DRSRPYILFVGRITRQKGVPH-LLDAVHYIP---K--------- 228 (388)
T ss_pred ----ch---------------HHH----HHHhCC--CCCceEEEEEcccccccCHHH-HHHHHHHHh---h---------
Confidence 00 001 134454 467789999999999999999 888776542 1
Q ss_pred CCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcCCCCcceEEEEcC-CCHHHHhhhccCccccccCCCCCccCCCcc
Q 003188 605 TPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYLKVVFVPN-YNVSVAELLIPGSELSQHISTAGMEASGTS 683 (840)
Q Consensus 605 ~p~~~If~GKA~P~y~~aK~iIk~I~~la~~in~d~~~~~~lkVvFl~n-YnvslA~~ii~gaDv~l~iS~a~~EAsGTs 683 (840)
+.++++.|.+.........+.+.+..+.. -.+ +|+|+.+ ++.+-...++.+||+.+.+|. .|+.|++
T Consensus 229 -~~~l~i~g~g~~~~~~~~~~~~~~~~~~~-------~~~--~v~~~~~~~~~~~~~~~~~~aDv~v~ps~--~e~~g~~ 296 (388)
T TIGR02149 229 -DVQVVLCAGAPDTPEVAEEVRQAVALLDR-------NRT--GIIWINKMLPKEELVELLSNAEVFVCPSI--YEPLGIV 296 (388)
T ss_pred -cCcEEEEeCCCCcHHHHHHHHHHHHHhcc-------ccC--ceEEecCCCCHHHHHHHHHhCCEEEeCCc--cCCCChH
Confidence 34677766554333333333333333321 112 4787765 566777888999999999999 8999999
Q ss_pred hhHHhhcCceEeeecCchhHHHHHHhcCcceEeecCccccchhhhhhccCCCCCCChhHHHHHHHHhcCCCCCCChHHHH
Q 003188 684 NMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAVAEQVPKLRKEREDGLFKPDPRFEEAKQFIRSGAFGSYDYNPLL 763 (840)
Q Consensus 684 ~MKam~NGal~i~tlDGanvEi~~~vG~~N~~~fG~~~d~V~~~~~~~~y~~~~~~~~l~~v~~~~~~G~f~~~~~~~l~ 763 (840)
.+-||..|.+.|+|-.|...|+++. +.|+++|-....+... ..++|.
T Consensus 297 ~lEA~a~G~PvI~s~~~~~~e~i~~--~~~G~~~~~~~~~~~~-------------------------------~~~~l~ 343 (388)
T TIGR02149 297 NLEAMACGTPVVASATGGIPEVVVD--GETGFLVPPDNSDADG-------------------------------FQAELA 343 (388)
T ss_pred HHHHHHcCCCEEEeCCCCHHHHhhC--CCceEEcCCCCCcccc-------------------------------hHHHHH
Confidence 9999999999999988887776653 3556665322111000 023443
Q ss_pred HHHhhCCCCCCCccccccCChHHHHHHHHHHHHHhcCHHHHHHHHHHHhccC-CCCChHHHHHHHHH
Q 003188 764 DSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYKDQKKWLKMSILSTAGS-GKFSSDRTIAQYAK 829 (840)
Q Consensus 764 ~~L~~~~~~~~~D~~~~~~Df~~y~~~~~~~~~~Y~d~~~W~~~~~~n~a~~-g~FSsDrti~eYa~ 829 (840)
++| .....|++.+.++..++.... -.|||+.++++|.+
T Consensus 344 ~~i----------------------------~~l~~~~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~ 382 (388)
T TIGR02149 344 KAI----------------------------NILLADPELAKKMGIAGRKRAEEEFSWGSIAKKTVE 382 (388)
T ss_pred HHH----------------------------HHHHhCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 333 334567888887777765432 27999999999875
No 24
>TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain. This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase.
Probab=99.36 E-value=7.2e-11 Score=134.46 Aligned_cols=254 Identities=19% Similarity=0.189 Sum_probs=153.0
Q ss_pred ccccccccCCcccchhhhhHHHHHhhhhcCccccCCCCCcccccccCcccccccCChhhhHHHHhhcCccccccChhhHh
Q 003188 443 MANLCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLLV 522 (840)
Q Consensus 443 Ma~lai~~S~~VNgVS~lH~eilk~~~f~~~~~l~p~k~~~iTNGI~~rrWl~~~NP~l~~li~~~~g~~~w~~~~~~l~ 522 (840)
+-..++..++.|-+||+- .++. .+..+..+-|+|+.-|-|||+..+| .|.-
T Consensus 177 ~~~~~~~~ad~ii~~s~~---~~~~-~~~~~~~~~~~ki~vIpnGvd~~~f----~~~~--------------------- 227 (439)
T TIGR02472 177 AEEETLAHASLVITSTHQ---EIEE-QYALYDSYQPERMQVIPPGVDLSRF----YPPQ--------------------- 227 (439)
T ss_pred HHHHHHHhCCEEEECCHH---HHHH-HHHhccCCCccceEEECCCcChhhc----CCCC---------------------
Confidence 334556677777777752 2221 1111223446789999999998887 3311
Q ss_pred hhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCceEeecccchhhhhhhhhhhHHHHHHHHHhhcCccccC
Q 003188 523 GLRQFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERK 602 (840)
Q Consensus 523 ~l~~~~~d~~~~~~~~~~K~~nK~~L~~~i~~~~G~~~dp~~l~d~~vkR~heYKRq~Lnll~ii~~y~~ik~~~p~~~~ 602 (840)
++. .+...+..+. +.+ .+++..+++++.|+++.|++++ ++..+.++.+++.
T Consensus 228 ------~~~--------~~~~~~~~~~-----~~~--~~~~~~~i~~vGrl~~~Kg~~~-li~A~~~l~~~~~------- 278 (439)
T TIGR02472 228 ------SSE--------ETSEIDNLLA-----PFL--KDPEKPPILAISRPDRRKNIPS-LVEAYGRSPKLQE------- 278 (439)
T ss_pred ------ccc--------cchhHHHHHH-----hhc--cccCCcEEEEEcCCcccCCHHH-HHHHHHhChhhhh-------
Confidence 000 0011122221 233 2466789999999999999999 9888776443322
Q ss_pred CCCCeEEEEEecCCcCCH---HHHHHHHHHHHHHhhhcCCcCCCCcceEEEEcCCCHHHHhhhccCc----cccccCCCC
Q 003188 603 KTTPRTIMIGGKAFATYT---NAKRIVKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGS----ELSQHISTA 675 (840)
Q Consensus 603 ~~~p~~~If~GKA~P~y~---~aK~iIk~I~~la~~in~d~~~~~~lkVvFl~nYnvslA~~ii~ga----Dv~l~iS~a 675 (840)
.+..++++|.+..... ..++..+.+..+++.+ .+.+ +|.|+....-+--..++++| |++..||+
T Consensus 279 --~~~l~li~G~g~~~~~l~~~~~~~~~~~~~~~~~~----~l~~--~V~f~g~~~~~~~~~~~~~a~~~~Dv~v~pS~- 349 (439)
T TIGR02472 279 --MANLVLVLGCRDDIRKMESQQREVLQKVLLLIDRY----DLYG--KVAYPKHHRPDDVPELYRLAARSRGIFVNPAL- 349 (439)
T ss_pred --hccEEEEeCCccccccccHHHHHHHHHHHHHHHHc----CCCc--eEEecCCCCHHHHHHHHHHHhhcCCEEecccc-
Confidence 1323446676543221 1222333344444433 2667 78887654444444555554 99999999
Q ss_pred CccCCCcchhHHhhcCceEeeecCchhHHHHHHhcCcceEeecCccccchhhhhhccCCCCCCChhHHHHHHHHhcCCCC
Q 003188 676 GMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAVAEQVPKLRKEREDGLFKPDPRFEEAKQFIRSGAFG 755 (840)
Q Consensus 676 ~~EAsGTs~MKam~NGal~i~tlDGanvEi~~~vG~~N~~~fG~~~d~V~~~~~~~~y~~~~~~~~l~~v~~~~~~G~f~ 755 (840)
.|+.|..-+=||..|.+.|+|--|...|+++. ++|+|++ .
T Consensus 350 -~E~fg~~~lEAma~G~PvV~s~~gg~~eiv~~--~~~G~lv-------------------------------------~ 389 (439)
T TIGR02472 350 -TEPFGLTLLEAAACGLPIVATDDGGPRDIIAN--CRNGLLV-------------------------------------D 389 (439)
T ss_pred -cCCcccHHHHHHHhCCCEEEeCCCCcHHHhcC--CCcEEEe-------------------------------------C
Confidence 89999999999999999999977776665532 2344443 2
Q ss_pred CCChHHHHHHHhhCCCCCCCccccccCChHHHHHHHHHHHHHhcCHHHHHHHHHHHhccC-CCCChHHHHHHHHHHH
Q 003188 756 SYDYNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYKDQKKWLKMSILSTAGS-GKFSSDRTIAQYAKEI 831 (840)
Q Consensus 756 ~~~~~~l~~~L~~~~~~~~~D~~~~~~Df~~y~~~~~~~~~~Y~d~~~W~~~~~~n~a~~-g~FSsDrti~eYa~~i 831 (840)
+.|.++|.++|. .+..|++.|.++..++-+.. ..|||++++++|.+-+
T Consensus 390 ~~d~~~la~~i~----------------------------~ll~~~~~~~~~~~~a~~~~~~~fsw~~~~~~~~~l~ 438 (439)
T TIGR02472 390 VLDLEAIASALE----------------------------DALSDSSQWQLWSRNGIEGVRRHYSWDAHVEKYLRIL 438 (439)
T ss_pred CCCHHHHHHHHH----------------------------HHHhCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 333455554443 23446777766666553322 3799999999997643
No 25
>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase. Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species.
Probab=99.26 E-value=6.1e-10 Score=123.99 Aligned_cols=240 Identities=16% Similarity=0.178 Sum_probs=154.6
Q ss_pred ccccCCcccchhhhhHHHHHhhhhcCccccCCCCCcccccccCcccccccCChhhhHHHHhhcCccccccChhhHhhhhc
Q 003188 447 CVVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLLVGLRQ 526 (840)
Q Consensus 447 ai~~S~~VNgVS~lH~eilk~~~f~~~~~l~p~k~~~iTNGI~~rrWl~~~NP~l~~li~~~~g~~~w~~~~~~l~~l~~ 526 (840)
.+..++.|-.+|+-..+.+... ++..++++.-|.|||+...| .|.
T Consensus 160 ~~~~~d~vi~~s~~~~~~~~~~-----~~~~~~ki~vi~ngvd~~~~----~~~-------------------------- 204 (405)
T TIGR03449 160 LVDNADRLIANTDEEARDLVRH-----YDADPDRIDVVAPGADLERF----RPG-------------------------- 204 (405)
T ss_pred HHHhcCeEEECCHHHHHHHHHH-----cCCChhhEEEECCCcCHHHc----CCC--------------------------
Confidence 3456788888888766655431 23445778888999998777 220
Q ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCceEeecccchhhhhhhhhhhHHHHHHHHHhhcCccccCCCCC
Q 003188 527 FADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTP 606 (840)
Q Consensus 527 ~~~d~~~~~~~~~~K~~nK~~L~~~i~~~~G~~~dp~~l~d~~vkR~heYKRq~Lnll~ii~~y~~ik~~~p~~~~~~~p 606 (840)
+. - .. ++++|+ +++.+.++++.|+..+|+.++ ++..+.++.+ . .|+ ..
T Consensus 205 --~~------~-~~------------~~~~~~--~~~~~~i~~~G~l~~~K~~~~-li~a~~~l~~--~-~~~-----~~ 252 (405)
T TIGR03449 205 --DR------A-TE------------RARLGL--PLDTKVVAFVGRIQPLKAPDV-LLRAVAELLD--R-DPD-----RN 252 (405)
T ss_pred --cH------H-HH------------HHhcCC--CCCCcEEEEecCCCcccCHHH-HHHHHHHHHh--h-CCC-----cc
Confidence 00 0 01 123454 456788999999999999999 8888877654 2 222 13
Q ss_pred eEEEEEecCCc-CCHHHHHHHHHHHHHHhhhcCCcCCCCcceEEEEcCCCHHHHhhhccCccccccCCCCCccCCCcchh
Q 003188 607 RTIMIGGKAFA-TYTNAKRIVKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNM 685 (840)
Q Consensus 607 ~~~If~GKA~P-~y~~aK~iIk~I~~la~~in~d~~~~~~lkVvFl~nYnvslA~~ii~gaDv~l~iS~a~~EAsGTs~M 685 (840)
.+++++|.+.+ ++..-.++.+++... .+.+ +|.|+..-.-+-...++++||+..+||+ .|..|++-+
T Consensus 253 ~~l~ivG~~~~~g~~~~~~l~~~~~~~--------~l~~--~v~~~g~~~~~~~~~~l~~ad~~v~ps~--~E~~g~~~l 320 (405)
T TIGR03449 253 LRVIVVGGPSGSGLATPDALIELAAEL--------GIAD--RVRFLPPRPPEELVHVYRAADVVAVPSY--NESFGLVAM 320 (405)
T ss_pred eEEEEEeCCCCCcchHHHHHHHHHHHc--------CCCc--eEEECCCCCHHHHHHHHHhCCEEEECCC--CCCcChHHH
Confidence 78888886542 322222233333222 2455 6888765455555678999999999999 899999999
Q ss_pred HHhhcCceEeeecCchhHHHHHHhcCcceEeecCccccchhhhhhccCCCCCCChhHHHHHHHHhcCCCCCCChHHHHHH
Q 003188 686 KFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAVAEQVPKLRKEREDGLFKPDPRFEEAKQFIRSGAFGSYDYNPLLDS 765 (840)
Q Consensus 686 Kam~NGal~i~tlDGanvEi~~~vG~~N~~~fG~~~d~V~~~~~~~~y~~~~~~~~l~~v~~~~~~G~f~~~~~~~l~~~ 765 (840)
-||..|.+.|+|-.|+..|+++. +.++|++ .+.+.+++.++
T Consensus 321 EAma~G~Pvi~~~~~~~~e~i~~--~~~g~~~-------------------------------------~~~d~~~la~~ 361 (405)
T TIGR03449 321 EAQACGTPVVAARVGGLPVAVAD--GETGLLV-------------------------------------DGHDPADWADA 361 (405)
T ss_pred HHHHcCCCEEEecCCCcHhhhcc--CCceEEC-------------------------------------CCCCHHHHHHH
Confidence 99999999999977776554432 2333332 22334555555
Q ss_pred HhhCCCCCCCccccccCChHHHHHHHHHHHHHhcCHHHHHHHHHHHhccCCCCChHHHHHHHHHHHh
Q 003188 766 LEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYKDQKKWLKMSILSTAGSGKFSSDRTIAQYAKEIW 832 (840)
Q Consensus 766 L~~~~~~~~~D~~~~~~Df~~y~~~~~~~~~~Y~d~~~W~~~~~~n~a~~g~FSsDrti~eYa~~iw 832 (840)
|. ++ ..|++.+.++..++....-.|||++++++|.+-..
T Consensus 362 i~-------------------------~~---l~~~~~~~~~~~~~~~~~~~fsw~~~~~~~~~~y~ 400 (405)
T TIGR03449 362 LA-------------------------RL---LDDPRTRIRMGAAAVEHAAGFSWAATADGLLSSYR 400 (405)
T ss_pred HH-------------------------HH---HhCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 53 22 23566666665554433337999999999986544
No 26
>cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=99.15 E-value=2.4e-09 Score=123.51 Aligned_cols=235 Identities=17% Similarity=0.178 Sum_probs=160.0
Q ss_pred cccccccccCCcccchhhhhHHHHHhhhhcCccccCCCCCcccccccCcccccccCChhhhHHHHhhcCccccccChhhH
Q 003188 442 RMANLCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLL 521 (840)
Q Consensus 442 ~Ma~lai~~S~~VNgVS~lH~eilk~~~f~~~~~l~p~k~~~iTNGI~~rrWl~~~NP~l~~li~~~~g~~~w~~~~~~l 521 (840)
.+...++..|+.|.+||+-..+.++. .+.-|+|+.-|.|||+..++- |.
T Consensus 236 ~l~~~~~~~ad~Ii~~s~~~~~~~~~------~g~~~~ki~vIpNgid~~~f~----~~--------------------- 284 (475)
T cd03813 236 SLGRLAYQAADRITTLYEGNRERQIE------DGADPEKIRVIPNGIDPERFA----PA--------------------- 284 (475)
T ss_pred HHHHHHHHhCCEEEecCHHHHHHHHH------cCCCHHHeEEeCCCcCHHHcC----Cc---------------------
Confidence 34566777899999999976665442 133467788889999876661 10
Q ss_pred hhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCceEeecccchhhhhhhhhhhHHHHHHHHHhhcCcccc
Q 003188 522 VGLRQFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQER 601 (840)
Q Consensus 522 ~~l~~~~~d~~~~~~~~~~K~~nK~~L~~~i~~~~G~~~dp~~l~d~~vkR~heYKRq~Lnll~ii~~y~~ik~~~p~~~ 601 (840)
.. . ...++.+.++++.|+...|+.+. ++..+..+.+ . .
T Consensus 285 -------~~--------~-------------------~~~~~~~~i~~vGrl~~~Kg~~~-li~a~~~l~~--~-~---- 322 (475)
T cd03813 285 -------RR--------A-------------------RPEKEPPVVGLIGRVVPIKDIKT-FIRAAAIVRK--K-I---- 322 (475)
T ss_pred -------cc--------c-------------------ccCCCCcEEEEEeccccccCHHH-HHHHHHHHHH--h-C----
Confidence 00 0 01346688999999999999999 8888776654 1 1
Q ss_pred CCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcCCCCcceEEEEcCCCHHHHhhhccCccccccCCCCCccCCC
Q 003188 602 KKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASG 681 (840)
Q Consensus 602 ~~~~p~~~If~GKA~P~y~~aK~iIk~I~~la~~in~d~~~~~~lkVvFl~nYnvslA~~ii~gaDv~l~iS~a~~EAsG 681 (840)
..+++++.|.+...-...+++-+++.++. +.+ +|.|+. ...+. .+++++|+...+|. .|+.|
T Consensus 323 ---p~~~l~IvG~g~~~~~~~~e~~~li~~l~--------l~~--~V~f~G--~~~v~-~~l~~aDv~vlpS~--~Eg~p 384 (475)
T cd03813 323 ---PDAEGWVIGPTDEDPEYAEECRELVESLG--------LED--NVKFTG--FQNVK-EYLPKLDVLVLTSI--SEGQP 384 (475)
T ss_pred ---CCeEEEEECCCCcChHHHHHHHHHHHHhC--------CCC--eEEEcC--CccHH-HHHHhCCEEEeCch--hhcCC
Confidence 25789999987533333333333333332 455 788887 44454 46789999999999 89999
Q ss_pred cchhHHhhcCceEeeecCchhHHHHHHhcCcceEeecCccccchhhhhhccCCCCCCChhHHHHHHHHhcCC-CCCCChH
Q 003188 682 TSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAVAEQVPKLRKEREDGLFKPDPRFEEAKQFIRSGA-FGSYDYN 760 (840)
Q Consensus 682 Ts~MKam~NGal~i~tlDGanvEi~~~vG~~N~~~fG~~~d~V~~~~~~~~y~~~~~~~~l~~v~~~~~~G~-f~~~~~~ 760 (840)
+.-+=+|..|.+.|+|--|..-|+++..+++ .|| .+|. +.+.+.+
T Consensus 385 ~~vlEAma~G~PVVatd~g~~~elv~~~~~~---~~g-------------------------------~~G~lv~~~d~~ 430 (475)
T cd03813 385 LVILEAMAAGIPVVATDVGSCRELIEGADDE---ALG-------------------------------PAGEVVPPADPE 430 (475)
T ss_pred hHHHHHHHcCCCEEECCCCChHHHhcCCccc---ccC-------------------------------CceEEECCCCHH
Confidence 9999999999999999888876666543211 111 1232 3344566
Q ss_pred HHHHHHhhCCCCCCCccccccCChHHHHHHHHHHHHHhcCHHHHHHHHHHHhccC-CCCChHHHHHHHHH
Q 003188 761 PLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYKDQKKWLKMSILSTAGS-GKFSSDRTIAQYAK 829 (840)
Q Consensus 761 ~l~~~L~~~~~~~~~D~~~~~~Df~~y~~~~~~~~~~Y~d~~~W~~~~~~n~a~~-g~FSsDrti~eYa~ 829 (840)
++.++|. .+..|++.|.++..++-+.. -.|||++++.+|.+
T Consensus 431 ~la~ai~----------------------------~ll~~~~~~~~~~~~a~~~v~~~~s~~~~~~~y~~ 472 (475)
T cd03813 431 ALARAIL----------------------------RLLKDPELRRAMGEAGRKRVERYYTLERMIDSYRR 472 (475)
T ss_pred HHHHHHH----------------------------HHhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 6665554 34568888888887776543 37999999999976
No 27
>cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases. Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder.
Probab=99.06 E-value=6e-09 Score=116.67 Aligned_cols=119 Identities=16% Similarity=0.148 Sum_probs=89.8
Q ss_pred CCCceEeecccchhhhhhhhhhhHHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcC
Q 003188 562 PNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPE 641 (840)
Q Consensus 562 p~~l~d~~vkR~heYKRq~Lnll~ii~~y~~ik~~~p~~~~~~~p~~~If~GKA~P~y~~aK~iIk~I~~la~~in~d~~ 641 (840)
++.+..+++.|+...|++++ ++..+..+.+ . + .+.+++++|.+. .... +.++.+.. .
T Consensus 191 ~~~~~i~~~grl~~~Kg~~~-li~a~~~l~~--~-~-------~~~~l~i~G~g~-~~~~-------l~~~~~~~----~ 247 (398)
T cd03796 191 NDKITIVVISRLVYRKGIDL-LVGIIPEICK--K-H-------PNVRFIIGGDGP-KRIL-------LEEMREKY----N 247 (398)
T ss_pred CCceEEEEEeccchhcCHHH-HHHHHHHHHh--h-C-------CCEEEEEEeCCc-hHHH-------HHHHHHHh----C
Confidence 56788999999999999999 8888766543 2 2 258999999863 2221 22222211 2
Q ss_pred CCCcceEEEEcCCCHHHHhhhccCccccccCCCCCccCCCcchhHHhhcCceEeeecCchhHHHHH
Q 003188 642 VNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQ 707 (840)
Q Consensus 642 ~~~~lkVvFl~nYnvslA~~ii~gaDv~l~iS~a~~EAsGTs~MKam~NGal~i~tlDGanvEi~~ 707 (840)
+.+ +|.|+...+-+-...++++||+.+.+|+ .|+.|++-+-||..|.+.|+|--|..-|+++
T Consensus 248 l~~--~v~~~G~~~~~~~~~~l~~ad~~v~pS~--~E~~g~~~~EAma~G~PVI~s~~gg~~e~i~ 309 (398)
T cd03796 248 LQD--RVELLGAVPHERVRDVLVQGHIFLNTSL--TEAFCIAIVEAASCGLLVVSTRVGGIPEVLP 309 (398)
T ss_pred CCC--eEEEeCCCCHHHHHHHHHhCCEEEeCCh--hhccCHHHHHHHHcCCCEEECCCCCchhhee
Confidence 556 7888876666777778899999999999 8999999999999999999997776655443
No 28
>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light.
Probab=98.94 E-value=5.3e-08 Score=106.69 Aligned_cols=237 Identities=14% Similarity=0.124 Sum_probs=154.8
Q ss_pred ccccCCcccchhhhhHHHHHhhhhcCccccCCCCCcccccccCcccccccCChhhhHHHHhhcCccccccChhhHhhhhc
Q 003188 447 CVVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLLVGLRQ 526 (840)
Q Consensus 447 ai~~S~~VNgVS~lH~eilk~~~f~~~~~l~p~k~~~iTNGI~~rrWl~~~NP~l~~li~~~~g~~~w~~~~~~l~~l~~ 526 (840)
.+..++.|-.+|....+.+... +...+.++.-|-||++...|. |..
T Consensus 160 ~~~~ad~ii~~s~~~~~~~~~~-----~~~~~~~~~vi~ng~~~~~~~----~~~------------------------- 205 (398)
T cd03800 160 LLRAADRVIASTPQEAEELYSL-----YGAYPRRIRVVPPGVDLERFT----PYG------------------------- 205 (398)
T ss_pred HHhhCCEEEEcCHHHHHHHHHH-----ccccccccEEECCCCCcccee----ccc-------------------------
Confidence 4556888888888776655532 122234577788999987772 211
Q ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCceEeecccchhhhhhhhhhhHHHHHHHHHhhcCccccCCCCC
Q 003188 527 FADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTP 606 (840)
Q Consensus 527 ~~~d~~~~~~~~~~K~~nK~~L~~~i~~~~G~~~dp~~l~d~~vkR~heYKRq~Lnll~ii~~y~~ik~~~p~~~~~~~p 606 (840)
++ . .. ++..+. .++.+.++++.|+..+|+.++ ++..+..+.+. + .+
T Consensus 206 --~~------~-~~------------~~~~~~--~~~~~~i~~~gr~~~~k~~~~-ll~a~~~l~~~---~-------~~ 251 (398)
T cd03800 206 --RA------E-AR------------RARLLR--DPDKPRILAVGRLDPRKGIDT-LIRAYAELPEL---R-------ER 251 (398)
T ss_pred --ch------h-hH------------HHhhcc--CCCCcEEEEEcccccccCHHH-HHHHHHHHHHh---C-------CC
Confidence 01 0 00 112232 356688899999999999998 88887776542 1 25
Q ss_pred eEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcCCCCcceEEEEcCCCHHHHhhhccCccccccCCCCCccCCCcchhH
Q 003188 607 RTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMK 686 (840)
Q Consensus 607 ~~~If~GKA~P~y~~aK~iIk~I~~la~~in~d~~~~~~lkVvFl~nYnvslA~~ii~gaDv~l~iS~a~~EAsGTs~MK 686 (840)
.++++.|.+...+.... ...+..+++.. ...+ +|.|+.-...+-...+++.||+.+.||. .|++|++-+-
T Consensus 252 ~~l~i~G~~~~~~~~~~--~~~~~~~~~~~----~~~~--~v~~~g~~~~~~~~~~~~~adi~l~ps~--~e~~~~~l~E 321 (398)
T cd03800 252 ANLVIVGGPRDDILAMD--EEELRELAREL----GVID--RVDFPGRVSREDLPALYRAADVFVNPAL--YEPFGLTALE 321 (398)
T ss_pred eEEEEEECCCCcchhhh--hHHHHHHHHhc----CCCc--eEEEeccCCHHHHHHHHHhCCEEEeccc--ccccCcHHHH
Confidence 78888887655433220 01133333321 1334 7888888777777788899999999999 8999999999
Q ss_pred HhhcCceEeeecCchhHHHHHHhcCcceEeecCccccchhhhhhccCCCCCCChhHHHHHHHHhcCCCCCCChHHHHHHH
Q 003188 687 FSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAVAEQVPKLRKEREDGLFKPDPRFEEAKQFIRSGAFGSYDYNPLLDSL 766 (840)
Q Consensus 687 am~NGal~i~tlDGanvEi~~~vG~~N~~~fG~~~d~V~~~~~~~~y~~~~~~~~l~~v~~~~~~G~f~~~~~~~l~~~L 766 (840)
||..|.+.|++-.|..-|+++.. +++++| .+.+.+++.+.+
T Consensus 322 a~a~G~Pvi~s~~~~~~e~i~~~--~~g~~~-------------------------------------~~~~~~~l~~~i 362 (398)
T cd03800 322 AMACGLPVVATAVGGPRDIVVDG--VTGLLV-------------------------------------DPRDPEALAAAL 362 (398)
T ss_pred HHhcCCCEEECCCCCHHHHccCC--CCeEEe-------------------------------------CCCCHHHHHHHH
Confidence 99999999988777665544321 223322 222345555444
Q ss_pred hhCCCCCCCccccccCChHHHHHHHHHHHHHhcCHHHHHHHHHHHhccC-CCCChHHHHHHHH
Q 003188 767 EGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYKDQKKWLKMSILSTAGS-GKFSSDRTIAQYA 828 (840)
Q Consensus 767 ~~~~~~~~~D~~~~~~Df~~y~~~~~~~~~~Y~d~~~W~~~~~~n~a~~-g~FSsDrti~eYa 828 (840)
. .+..|++.|.++..++.... ..|||+..+++|.
T Consensus 363 ~----------------------------~l~~~~~~~~~~~~~a~~~~~~~~s~~~~~~~~~ 397 (398)
T cd03800 363 R----------------------------RLLTDPALRRRLSRAGLRRARARYTWERVAARLL 397 (398)
T ss_pred H----------------------------HHHhCHHHHHHHHHHHHHHHHHhCCHHHHHHHHh
Confidence 3 33467788888887766644 5899999999986
No 29
>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases. ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans.
Probab=98.92 E-value=5.3e-08 Score=107.40 Aligned_cols=131 Identities=16% Similarity=0.173 Sum_probs=97.5
Q ss_pred CCCCceEeecccchhhhhhhhhhhHHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCc
Q 003188 561 DPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDP 640 (840)
Q Consensus 561 dp~~l~d~~vkR~heYKRq~Lnll~ii~~y~~ik~~~p~~~~~~~p~~~If~GKA~P~y~~aK~iIk~I~~la~~in~d~ 640 (840)
.++.++++.+.|+.+.|++++ ++.++.++.+- .+ ...+.++++.|.+.+.....-.....+.++++.. .
T Consensus 208 ~~~~~~i~~~grl~~~Kg~~~-ll~a~~~l~~~---~~----~~~~~~l~i~G~~~~~~~~~~~~~~~l~~~~~~~---~ 276 (392)
T cd03805 208 KSGKKTFLSINRFERKKNIAL-AIEAFAILKDK---LA----EFKNVRLVIAGGYDPRVAENVEYLEELQRLAEEL---L 276 (392)
T ss_pred CCCceEEEEEeeecccCChHH-HHHHHHHHHhh---cc----cccCeEEEEEcCCCCCCchhHHHHHHHHHHHHHh---c
Confidence 356789999999999999999 99988887542 10 0125789999988775433322233444444320 1
Q ss_pred CCCCcceEEEEcCCCHHHHhhhccCccccccCCCCCccCCCcchhHHhhcCceEeeecCchhHHHH
Q 003188 641 EVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIR 706 (840)
Q Consensus 641 ~~~~~lkVvFl~nYnvslA~~ii~gaDv~l~iS~a~~EAsGTs~MKam~NGal~i~tlDGanvEi~ 706 (840)
...+ +|.|+....-.....++.+||+.+.+|. .|..|++-+-||..|.+.|+|.-|..-|++
T Consensus 277 ~l~~--~V~f~g~~~~~~~~~~l~~ad~~l~~s~--~E~~g~~~lEAma~G~PvI~s~~~~~~e~i 338 (392)
T cd03805 277 LLED--QVIFLPSISDSQKELLLSSARALLYTPS--NEHFGIVPLEAMYAGKPVIACNSGGPLETV 338 (392)
T ss_pred CCCc--eEEEeCCCChHHHHHHHhhCeEEEECCC--cCCCCchHHHHHHcCCCEEEECCCCcHHHh
Confidence 2456 8999998877777788999999999999 899999999999999999999666655543
No 30
>PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=98.92 E-value=1.3e-07 Score=110.53 Aligned_cols=126 Identities=15% Similarity=0.115 Sum_probs=92.7
Q ss_pred CCCceEeecccchhhhhhhhhhhHHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcC
Q 003188 562 PNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPE 641 (840)
Q Consensus 562 p~~l~d~~vkR~heYKRq~Lnll~ii~~y~~ik~~~p~~~~~~~p~~~If~GKA~P~y~~aK~iIk~I~~la~~in~d~~ 641 (840)
++.++++++-||+..|++.. ++..+.++.+ . . .++.+++.|.+.. . . .+.+.++.. .
T Consensus 396 ~~~~vIg~VgRl~~~Kg~~~-LI~A~a~llk--~-~-------pdirLvIVGdG~~---~-e----eLk~la~el----g 452 (578)
T PRK15490 396 DADTTIGGVFRFVGDKNPFA-WIDFAARYLQ--H-H-------PATRFVLVGDGDL---R-A----EAQKRAEQL----G 452 (578)
T ss_pred CCCcEEEEEEEEehhcCHHH-HHHHHHHHHh--H-C-------CCeEEEEEeCchh---H-H----HHHHHHHHc----C
Confidence 55678899999999999998 7777766544 2 1 2578999997632 1 1 233333321 1
Q ss_pred CCCcceEEEEcCCCHHHHhhhccCccccccCCCCCccCCCcchhHHhhcCceEeeecCchhHHHHHHhcCcceEeec
Q 003188 642 VNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFG 718 (840)
Q Consensus 642 ~~~~lkVvFl~nYnvslA~~ii~gaDv~l~iS~a~~EAsGTs~MKam~NGal~i~tlDGanvEi~~~vG~~N~~~fG 718 (840)
+.+ +|.|+. |.-.+ ..+++++|++..||+ +|+.|.+-+-+|..|.+.|+|-.|.+-|++++ ++|+|++-
T Consensus 453 L~d--~V~FlG-~~~Dv-~~~LaaADVfVlPS~--~EGfp~vlLEAMA~GlPVVATdvGG~~EiV~d--G~nG~LVp 521 (578)
T PRK15490 453 ILE--RILFVG-ASRDV-GYWLQKMNVFILFSR--YEGLPNVLIEAQMVGVPVISTPAGGSAECFIE--GVSGFILD 521 (578)
T ss_pred CCC--cEEECC-ChhhH-HHHHHhCCEEEEccc--ccCccHHHHHHHHhCCCEEEeCCCCcHHHccc--CCcEEEEC
Confidence 445 677775 44344 457899999999999 99999999999999999999988888777753 46777764
No 31
>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=98.91 E-value=7.1e-08 Score=105.03 Aligned_cols=114 Identities=15% Similarity=0.190 Sum_probs=82.7
Q ss_pred CCCCceEeecccchhhhhhhhhhhHHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCc
Q 003188 561 DPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDP 640 (840)
Q Consensus 561 dp~~l~d~~vkR~heYKRq~Lnll~ii~~y~~ik~~~p~~~~~~~p~~~If~GKA~P~y~~aK~iIk~I~~la~~in~d~ 640 (840)
.++....+++.|+..+|+.+. ++..+.++.+ . .|.++++.|.+.. . +. +.+.++..
T Consensus 194 ~~~~~~il~~g~l~~~K~~~~-li~a~~~l~~----~-------~~~~l~i~G~g~~-~---~~----~~~~~~~~---- 249 (371)
T cd04962 194 PEGEKVLIHISNFRPVKRIDD-VIRIFAKVRK----E-------VPARLLLVGDGPE-R---SP----AERLAREL---- 249 (371)
T ss_pred CCCCeEEEEecccccccCHHH-HHHHHHHHHh----c-------CCceEEEEcCCcC-H---HH----HHHHHHHc----
Confidence 467788999999999999999 8877766532 1 2678999998732 1 12 22222221
Q ss_pred CCCCcceEEEEcCCCHHHHhhhccCccccccCCCCCccCCCcchhHHhhcCceEeeecCchhHH
Q 003188 641 EVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVE 704 (840)
Q Consensus 641 ~~~~~lkVvFl~nYnvslA~~ii~gaDv~l~iS~a~~EAsGTs~MKam~NGal~i~tlDGanvE 704 (840)
.+.+ +|.|+.. ... ...++.+||+..+||+ .|+.|++-+-+|..|.+.|+|-.|..-|
T Consensus 250 ~~~~--~v~~~g~-~~~-~~~~~~~~d~~v~ps~--~E~~~~~~~EAma~g~PvI~s~~~~~~e 307 (371)
T cd04962 250 GLQD--DVLFLGK-QDH-VEELLSIADLFLLPSE--KESFGLAALEAMACGVPVVASNAGGIPE 307 (371)
T ss_pred CCCc--eEEEecC-ccc-HHHHHHhcCEEEeCCC--cCCCccHHHHHHHcCCCEEEeCCCCchh
Confidence 2445 6777763 334 4567899999999998 9999999999999999999885555433
No 32
>cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases. mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide.
Probab=98.87 E-value=4.5e-08 Score=104.69 Aligned_cols=115 Identities=16% Similarity=0.057 Sum_probs=89.1
Q ss_pred CCCceEeecccchhhhhhhhhhhHHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcC
Q 003188 562 PNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPE 641 (840)
Q Consensus 562 p~~l~d~~vkR~heYKRq~Lnll~ii~~y~~ik~~~p~~~~~~~p~~~If~GKA~P~y~~aK~iIk~I~~la~~in~d~~ 641 (840)
++.+.++++.|+..+|+.++ ++..+..+..- + .+.++++.|...+.+......+ .+ ..
T Consensus 193 ~~~~~i~~~G~~~~~K~~~~-~l~~~~~~~~~---~-------~~~~l~i~G~~~~~~~~~~~~~---~~--------~~ 250 (365)
T cd03809 193 LPRPYFLYVGTIEPRKNLER-LLEAFARLPAK---G-------PDPKLVIVGKRGWLNEELLARL---RE--------LG 250 (365)
T ss_pred CCCCeEEEeCCCccccCHHH-HHHHHHHHHHh---c-------CCCCEEEecCCccccHHHHHHH---HH--------cC
Confidence 45678899999999999999 88887776541 1 1578999998877777643222 11 12
Q ss_pred CCCcceEEEEcCCCHHHHhhhccCccccccCCCCCccCCCcchhHHhhcCceEeeecCchh
Q 003188 642 VNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGAN 702 (840)
Q Consensus 642 ~~~~lkVvFl~nYnvslA~~ii~gaDv~l~iS~a~~EAsGTs~MKam~NGal~i~tlDGan 702 (840)
..+ +|.|+...+-+-...++..||+.+.||+ .|..|.+-+-+|..|.+.|+|--|+.
T Consensus 251 ~~~--~v~~~g~~~~~~~~~~~~~~d~~l~ps~--~e~~~~~~~Ea~a~G~pvI~~~~~~~ 307 (365)
T cd03809 251 LGD--RVRFLGYVSDEELAALYRGARAFVFPSL--YEGFGLPVLEAMACGTPVIASNISSL 307 (365)
T ss_pred CCC--eEEECCCCChhHHHHHHhhhhhhcccch--hccCCCCHHHHhcCCCcEEecCCCCc
Confidence 445 7888887777777888999999999999 89999999999999999998755443
No 33
>PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase
Probab=98.87 E-value=1e-07 Score=109.55 Aligned_cols=169 Identities=12% Similarity=0.074 Sum_probs=109.2
Q ss_pred ccCCcccchhhhhHHHHHhhhhcCccccCCCCCcccccccCcccccccCChhhhHHHHhhcCccccccChhhHhhhhccC
Q 003188 449 VSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLLVGLRQFA 528 (840)
Q Consensus 449 ~~S~~VNgVS~lH~eilk~~~f~~~~~l~p~k~~~iTNGI~~rrWl~~~NP~l~~li~~~~g~~~w~~~~~~l~~l~~~~ 528 (840)
..++.|-.+|+-..+.+++. ...-+.++.-|-|||+..++ +|..
T Consensus 204 ~~ad~ii~~S~~~~~~l~~~-----~~~~~~kv~vi~nGvd~~~f----~p~~--------------------------- 247 (465)
T PLN02871 204 RAADLTLVTSPALGKELEAA-----GVTAANRIRVWNKGVDSESF----HPRF--------------------------- 247 (465)
T ss_pred hhCCEEEECCHHHHHHHHHc-----CCCCcCeEEEeCCccCcccc----CCcc---------------------------
Confidence 35777888888777666532 11124567778899998777 3321
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCceEeecccchhhhhhhhhhhHHHHHHHHHhhcCccccCCCCCeE
Q 003188 529 DNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRT 608 (840)
Q Consensus 529 ~d~~~~~~~~~~K~~nK~~L~~~i~~~~G~~~dp~~l~d~~vkR~heYKRq~Lnll~ii~~y~~ik~~~p~~~~~~~p~~ 608 (840)
+.. +. +. ++.. ..|+.++++++.|+..+|+.+. ++..+.++ ....
T Consensus 248 ~~~-------~~----~~--------~~~~-~~~~~~~i~~vGrl~~~K~~~~-li~a~~~~--------------~~~~ 292 (465)
T PLN02871 248 RSE-------EM----RA--------RLSG-GEPEKPLIVYVGRLGAEKNLDF-LKRVMERL--------------PGAR 292 (465)
T ss_pred ccH-------HH----HH--------HhcC-CCCCCeEEEEeCCCchhhhHHH-HHHHHHhC--------------CCcE
Confidence 111 01 11 1111 2356788999999999999888 65543221 1468
Q ss_pred EEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcCCCCcceEEEEcCCCHHHHhhhccCccccccCCCCCccCCCcchhHHh
Q 003188 609 IMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFS 688 (840)
Q Consensus 609 ~If~GKA~P~y~~aK~iIk~I~~la~~in~d~~~~~~lkVvFl~nYnvslA~~ii~gaDv~l~iS~a~~EAsGTs~MKam 688 (840)
++|+|.+. ... .+.++++ . .+|.|+.--.-+-...++++||++..+|. .|..|..-+=+|
T Consensus 293 l~ivG~G~-~~~-------~l~~~~~---~-------~~V~f~G~v~~~ev~~~~~~aDv~V~pS~--~E~~g~~vlEAm 352 (465)
T PLN02871 293 LAFVGDGP-YRE-------ELEKMFA---G-------TPTVFTGMLQGDELSQAYASGDVFVMPSE--SETLGFVVLEAM 352 (465)
T ss_pred EEEEeCCh-HHH-------HHHHHhc---c-------CCeEEeccCCHHHHHHHHHHCCEEEECCc--ccccCcHHHHHH
Confidence 99999652 111 1222222 1 15777643333445568899999999998 899999999999
Q ss_pred hcCceEeeecCchhHHHHHH
Q 003188 689 LNGCLIIGTLDGANVEIRQE 708 (840)
Q Consensus 689 ~NGal~i~tlDGanvEi~~~ 708 (840)
..|.+.|+|-.|..-|+++.
T Consensus 353 A~G~PVI~s~~gg~~eiv~~ 372 (465)
T PLN02871 353 ASGVPVVAARAGGIPDIIPP 372 (465)
T ss_pred HcCCCEEEcCCCCcHhhhhc
Confidence 99999999977776666543
No 34
>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases. WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core.
Probab=98.82 E-value=2e-07 Score=100.47 Aligned_cols=181 Identities=17% Similarity=0.231 Sum_probs=121.6
Q ss_pred cCCcccchhhhhHHHHHhhhhcCccccCCCCCcccccccCcccccccCChhhhHHHHhhcCccccccChhhHhhhhccCC
Q 003188 450 SAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLLVGLRQFAD 529 (840)
Q Consensus 450 ~S~~VNgVS~lH~eilk~~~f~~~~~l~p~k~~~iTNGI~~rrWl~~~NP~l~~li~~~~g~~~w~~~~~~l~~l~~~~~ 529 (840)
.++.+-.||+-..+.+++. +++-++++.-|-|||+...+ .|.. .+
T Consensus 124 ~~~~vi~~s~~~~~~~~~~-----~~~~~~k~~~i~ngi~~~~~----~~~~--------------------------~~ 168 (355)
T cd03819 124 RGDRVIAVSNFIADHIREN-----YGVDPDRIRVIPRGVDLDRF----DPGA--------------------------VP 168 (355)
T ss_pred hcCEEEEeCHHHHHHHHHh-----cCCChhhEEEecCCcccccc----Cccc--------------------------cc
Confidence 3566778888777766532 23445678888899998766 1110 00
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCceEeecccchhhhhhhhhhhHHHHHHHHHhhcCccccCCCCCeEE
Q 003188 530 NTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTI 609 (840)
Q Consensus 530 d~~~~~~~~~~K~~nK~~L~~~i~~~~G~~~dp~~l~d~~vkR~heYKRq~Lnll~ii~~y~~ik~~~p~~~~~~~p~~~ 609 (840)
+. ++. + ++++.+. .++.+..+++.|+...|+++. ++..+..+.+. + .+.++
T Consensus 169 ~~----~~~--------~----~~~~~~~--~~~~~~i~~~Gr~~~~Kg~~~-li~~~~~l~~~---~-------~~~~l 219 (355)
T cd03819 169 PE----RIL--------A----LAREWPL--PKGKPVILLPGRLTRWKGQEV-FIEALARLKKD---D-------PDVHL 219 (355)
T ss_pred hH----HHH--------H----HHHHcCC--CCCceEEEEeeccccccCHHH-HHHHHHHHHhc---C-------CCeEE
Confidence 10 010 0 2234453 466788999999999999999 88887776541 1 26899
Q ss_pred EEEecCCcCCHHHHHHHHHHHHHHhhhcCCcCCCCcceEEEEcCCCHHHHhhhccCccccccCC-CCCccCCCcchhHHh
Q 003188 610 MIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHIS-TAGMEASGTSNMKFS 688 (840)
Q Consensus 610 If~GKA~P~y~~aK~iIk~I~~la~~in~d~~~~~~lkVvFl~nYnvslA~~ii~gaDv~l~iS-~a~~EAsGTs~MKam 688 (840)
++.|.+.+.....+.+.+.+.+.. ..+ +|.|+.. ...++ .++.+||+...+| . .|..|++-+=||
T Consensus 220 ~ivG~~~~~~~~~~~~~~~~~~~~--------~~~--~v~~~g~-~~~~~-~~l~~ad~~i~ps~~--~e~~~~~l~EA~ 285 (355)
T cd03819 220 LIVGDAQGRRFYYAELLELIKRLG--------LQD--RVTFVGH-CSDMP-AAYALADIVVSASTE--PEAFGRTAVEAQ 285 (355)
T ss_pred EEEECCcccchHHHHHHHHHHHcC--------Ccc--eEEEcCC-cccHH-HHHHhCCEEEecCCC--CCCCchHHHHHH
Confidence 999998765444443444433322 334 5666655 33444 6678899999999 5 799999999999
Q ss_pred hcCceEeeecCchhHHHHHH
Q 003188 689 LNGCLIIGTLDGANVEIRQE 708 (840)
Q Consensus 689 ~NGal~i~tlDGanvEi~~~ 708 (840)
..|.+.|+|-.|..-|++..
T Consensus 286 a~G~PvI~~~~~~~~e~i~~ 305 (355)
T cd03819 286 AMGRPVIASDHGGARETVRP 305 (355)
T ss_pred hcCCCEEEcCCCCcHHHHhC
Confidence 99999999977777666544
No 35
>PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional
Probab=98.81 E-value=1.4e-07 Score=107.06 Aligned_cols=177 Identities=16% Similarity=0.130 Sum_probs=120.6
Q ss_pred CceEeecccchhhhhhhhhhhHHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcCCC
Q 003188 564 SLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVN 643 (840)
Q Consensus 564 ~l~d~~vkR~heYKRq~Lnll~ii~~y~~ik~~~p~~~~~~~p~~~If~GKA~P~y~~aK~iIk~I~~la~~in~d~~~~ 643 (840)
.+.++++.|+.++|+.+. ++..+.++.+ . + .++++++.|.+.. -.++.+++.++. +.
T Consensus 222 ~~~il~vGrl~~~Kg~~~-ll~a~~~l~~--~-~-------~~~~l~ivG~G~~----~~~l~~~~~~~~--------l~ 278 (406)
T PRK15427 222 PLEIISVARLTEKKGLHV-AIEACRQLKE--Q-G-------VAFRYRILGIGPW----ERRLRTLIEQYQ--------LE 278 (406)
T ss_pred CeEEEEEeCcchhcCHHH-HHHHHHHHHh--h-C-------CCEEEEEEECchh----HHHHHHHHHHcC--------CC
Confidence 356789999999999999 8888776643 1 1 2578999997642 122223333322 45
Q ss_pred CcceEEEEcCCCHHHHhhhccCccccccCCCCC----ccCCCcchhHHhhcCceEeeecCchhHHHHHHhcCcceEeecC
Q 003188 644 SYLKVVFVPNYNVSVAELLIPGSELSQHISTAG----MEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGA 719 (840)
Q Consensus 644 ~~lkVvFl~nYnvslA~~ii~gaDv~l~iS~a~----~EAsGTs~MKam~NGal~i~tlDGanvEi~~~vG~~N~~~fG~ 719 (840)
+ +|.|..-..-+-...++.+||++..||..+ +|..|+.-|=||..|.+.|+|-.|..-|+++. ++++|++
T Consensus 279 ~--~V~~~G~~~~~el~~~l~~aDv~v~pS~~~~~g~~Eg~p~~llEAma~G~PVI~t~~~g~~E~v~~--~~~G~lv-- 352 (406)
T PRK15427 279 D--VVEMPGFKPSHEVKAMLDDADVFLLPSVTGADGDMEGIPVALMEAMAVGIPVVSTLHSGIPELVEA--DKSGWLV-- 352 (406)
T ss_pred C--eEEEeCCCCHHHHHHHHHhCCEEEECCccCCCCCccCccHHHHHHHhCCCCEEEeCCCCchhhhcC--CCceEEe--
Confidence 5 677765544445567889999999999853 58888999999999999999977766555432 2334433
Q ss_pred ccccchhhhhhccCCCCCCChhHHHHHHHHhcCCCCCCChHHHHHHHhhCCCCCCCccccccCChHHHHHHHHHHHHHhc
Q 003188 720 VAEQVPKLRKEREDGLFKPDPRFEEAKQFIRSGAFGSYDYNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYK 799 (840)
Q Consensus 720 ~~d~V~~~~~~~~y~~~~~~~~l~~v~~~~~~G~f~~~~~~~l~~~L~~~~~~~~~D~~~~~~Df~~y~~~~~~~~~~Y~ 799 (840)
.+.+.+++.++|. ....
T Consensus 353 -----------------------------------~~~d~~~la~ai~----------------------------~l~~ 369 (406)
T PRK15427 353 -----------------------------------PENDAQALAQRLA----------------------------AFSQ 369 (406)
T ss_pred -----------------------------------CCCCHHHHHHHHH----------------------------HHHh
Confidence 2334555554443 2345
Q ss_pred -CHHHHHHHHHHHhccC-CCCChHHHHHHHHHHHh
Q 003188 800 -DQKKWLKMSILSTAGS-GKFSSDRTIAQYAKEIW 832 (840)
Q Consensus 800 -d~~~W~~~~~~n~a~~-g~FSsDrti~eYa~~iw 832 (840)
|++.+.+|..++-... ..|||++.++++++-+-
T Consensus 370 ~d~~~~~~~~~~ar~~v~~~f~~~~~~~~l~~~~~ 404 (406)
T PRK15427 370 LDTDELAPVVKRAREKVETDFNQQVINRELASLLQ 404 (406)
T ss_pred CCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHh
Confidence 7777887777664432 48999999999987653
No 36
>cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor. It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain.
Probab=98.78 E-value=1.3e-07 Score=109.22 Aligned_cols=123 Identities=11% Similarity=-0.008 Sum_probs=84.7
Q ss_pred CCCceEeecccchhhhhhhhhhhHHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCC-HHHHHHHHHHHHHHhhhcCCc
Q 003188 562 PNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATY-TNAKRIVKLVNDVGEVVNTDP 640 (840)
Q Consensus 562 p~~l~d~~vkR~heYKRq~Lnll~ii~~y~~ik~~~p~~~~~~~p~~~If~GKA~P~y-~~aK~iIk~I~~la~~in~d~ 640 (840)
++..++++|.|++..|+..+ ++..+.++.+ . +|+.+ ..+++++.|.+.-++ ..-.++.+.+.+++..||..-
T Consensus 262 ~~~~~il~vgRl~~~Kgi~~-ll~A~~~ll~--~-~p~~~---~~v~Lv~vg~~~~g~~~~~~~l~~~l~~~v~~in~~~ 334 (460)
T cd03788 262 GGRKLIVGVDRLDYSKGIPE-RLLAFERLLE--R-YPEWR---GKVVLVQIAVPSRTDVPEYQELRREVEELVGRINGKF 334 (460)
T ss_pred CCCEEEEEecCccccCCHHH-HHHHHHHHHH--h-Chhhc---CCEEEEEEccCCCcCcHHHHHHHHHHHHHHHHHHhcc
Confidence 46788999999999999999 8888887754 2 34321 135677666543222 222345566777766665311
Q ss_pred CCCCcceEEEEcCC-CHHHHhhhccCccccccCCCCCccCCCcchhHHhhcCce
Q 003188 641 EVNSYLKVVFVPNY-NVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCL 693 (840)
Q Consensus 641 ~~~~~lkVvFl~nY-nvslA~~ii~gaDv~l~iS~a~~EAsGTs~MKam~NGal 693 (840)
...+.-.|+|+.++ +-+--..++++||+++.+|+ .|.-|+.-+=||.-|..
T Consensus 335 g~~~~~~v~~~~g~v~~~el~~~y~~aDv~v~pS~--~Eg~~lv~lEAma~g~p 386 (460)
T cd03788 335 GTLDWTPVRYLYRSLPREELAALYRAADVALVTPL--RDGMNLVAKEYVACQDD 386 (460)
T ss_pred CCCCceeEEEEeCCCCHHHHHHHHHhccEEEeCcc--ccccCcccceeEEEecC
Confidence 11112247777654 55666678899999999999 89999999999999885
No 37
>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases. WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis.
Probab=98.76 E-value=4.7e-07 Score=95.72 Aligned_cols=123 Identities=15% Similarity=0.120 Sum_probs=88.3
Q ss_pred HhCCCCCCCCceEeecccchhhhhhhhhhhHHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHh
Q 003188 555 VTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGE 634 (840)
Q Consensus 555 ~~G~~~dp~~l~d~~vkR~heYKRq~Lnll~ii~~y~~ik~~~p~~~~~~~p~~~If~GKA~P~y~~aK~iIk~I~~la~ 634 (840)
++|+ +++.++.+++.|+..+|+.++ ++..+..+.+ . . .+.++++.|.+....... ..++ +
T Consensus 186 ~~~~--~~~~~~i~~~G~~~~~K~~~~-li~a~~~l~~--~-~-------~~~~l~i~G~~~~~~~~~-~~~~------~ 245 (365)
T cd03807 186 ELGL--PEDTFLIGIVARLHPQKDHAT-LLRAAALLLK--K-F-------PNARLLLVGDGPDRANLE-LLAL------K 245 (365)
T ss_pred hcCC--CCCCeEEEEecccchhcCHHH-HHHHHHHHHH--h-C-------CCeEEEEecCCcchhHHH-HHHH------H
Confidence 4454 466788999999999999998 8888777654 1 1 268999999876554331 1111 1
Q ss_pred hhcCCcCCCCcceEEEEcCCCHHHHhhhccCccccccCCCCCccCCCcchhHHhhcCceEeeecCchhHHHHH
Q 003188 635 VVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQ 707 (840)
Q Consensus 635 ~in~d~~~~~~lkVvFl~nYnvslA~~ii~gaDv~l~iS~a~~EAsGTs~MKam~NGal~i~tlDGanvEi~~ 707 (840)
. -...+ +|.|+.. ... ...++..||+...||+ .|..|++-+-||..|.+.|++-.|+.-|+..
T Consensus 246 ~----~~~~~--~v~~~g~-~~~-~~~~~~~adi~v~ps~--~e~~~~~~~Ea~a~g~PvI~~~~~~~~e~~~ 308 (365)
T cd03807 246 E----LGLED--KVILLGE-RSD-VPALLNALDVFVLSSL--SEGFPNVLLEAMACGLPVVATDVGDNAELVG 308 (365)
T ss_pred h----cCCCc--eEEEccc-ccc-HHHHHHhCCEEEeCCc--cccCCcHHHHHHhcCCCEEEcCCCChHHHhh
Confidence 1 12444 5666653 233 3568899999999999 6999999999999999999987777655544
No 38
>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases. ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides.
Probab=98.76 E-value=5.1e-07 Score=96.65 Aligned_cols=178 Identities=12% Similarity=0.091 Sum_probs=119.4
Q ss_pred CCCceEeecccchhhhhhhhhhhHHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHH-HHHHHHHHhhhcCCc
Q 003188 562 PNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRI-VKLVNDVGEVVNTDP 640 (840)
Q Consensus 562 p~~l~d~~vkR~heYKRq~Lnll~ii~~y~~ik~~~p~~~~~~~p~~~If~GKA~P~y~~aK~i-Ik~I~~la~~in~d~ 640 (840)
++.+..+++.|++++|+.++ ++..+.++.+ . + .+.++++.|.+.+.....+.. .++|.++
T Consensus 183 ~~~~~i~~~G~~~~~K~~~~-ll~a~~~~~~--~-~-------~~~~l~i~G~~~~~~~~~~~~~~~~i~~~-------- 243 (366)
T cd03822 183 DGRPVLLTFGLLRPYKGLEL-LLEALPLLVA--K-H-------PDVRLLVAGETHPDLERYRGEAYALAERL-------- 243 (366)
T ss_pred CCCeEEEEEeeccCCCCHHH-HHHHHHHHHh--h-C-------CCeEEEEeccCccchhhhhhhhHhHHHhc--------
Confidence 45688899999999999998 8888877654 1 2 268999999988766542211 0112222
Q ss_pred CCCCcceEEEEcC-CCHHHHhhhccCccccccCCCCCcc--CCCcchhHHhhcCceEeeecCchhHHHHHHhcCcceEee
Q 003188 641 EVNSYLKVVFVPN-YNVSVAELLIPGSELSQHISTAGME--ASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLF 717 (840)
Q Consensus 641 ~~~~~lkVvFl~n-YnvslA~~ii~gaDv~l~iS~a~~E--AsGTs~MKam~NGal~i~tlDGanvEi~~~vG~~N~~~f 717 (840)
...+ +|.|+.. ...+-...+++.||+..+||+ .| ..|..-+-||..|.+.|+|-.|. .|.+.. +.++++
T Consensus 244 ~~~~--~v~~~~~~~~~~~~~~~~~~ad~~v~ps~--~e~~~~~~~~~Ea~a~G~PvI~~~~~~-~~~i~~--~~~g~~- 315 (366)
T cd03822 244 GLAD--RVIFINRYLPDEELPELFSAADVVVLPYR--SADQTQSGVLAYAIGFGKPVISTPVGH-AEEVLD--GGTGLL- 315 (366)
T ss_pred CCCC--cEEEecCcCCHHHHHHHHhhcCEEEeccc--ccccccchHHHHHHHcCCCEEecCCCC-hheeee--CCCcEE-
Confidence 2455 7999988 555566778899999999999 88 66666777899999999875555 222211 122222
Q ss_pred cCccccchhhhhhccCCCCCCChhHHHHHHHHhcCCCCCCChHHHHHHHhhCCCCCCCccccccCChHHHHHHHHHHHHH
Q 003188 718 GAVAEQVPKLRKEREDGLFKPDPRFEEAKQFIRSGAFGSYDYNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQA 797 (840)
Q Consensus 718 G~~~d~V~~~~~~~~y~~~~~~~~l~~v~~~~~~G~f~~~~~~~l~~~L~~~~~~~~~D~~~~~~Df~~y~~~~~~~~~~ 797 (840)
+.+.+.+++.+.|. .+
T Consensus 316 ------------------------------------~~~~d~~~~~~~l~----------------------------~l 331 (366)
T cd03822 316 ------------------------------------VPPGDPAALAEAIR----------------------------RL 331 (366)
T ss_pred ------------------------------------EcCCCHHHHHHHHH----------------------------HH
Confidence 22233455544443 23
Q ss_pred hcCHHHHHHHHHHHhccCCCCChHHHHHHHHHH
Q 003188 798 YKDQKKWLKMSILSTAGSGKFSSDRTIAQYAKE 830 (840)
Q Consensus 798 Y~d~~~W~~~~~~n~a~~g~FSsDrti~eYa~~ 830 (840)
..|++.+.++...+......|||++.+++|.+-
T Consensus 332 ~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~ 364 (366)
T cd03822 332 LADPELAQALRARAREYARAMSWERVAERYLRL 364 (366)
T ss_pred HcChHHHHHHHHHHHHHHhhCCHHHHHHHHHHH
Confidence 457777887777665555569999999998763
No 39
>cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=98.71 E-value=5.4e-07 Score=98.05 Aligned_cols=118 Identities=17% Similarity=0.164 Sum_probs=85.5
Q ss_pred CceEeecccchhhhhhhhhhhHHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcCCC
Q 003188 564 SLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVN 643 (840)
Q Consensus 564 ~l~d~~vkR~heYKRq~Lnll~ii~~y~~ik~~~p~~~~~~~p~~~If~GKA~P~y~~aK~iIk~I~~la~~in~d~~~~ 643 (840)
.+..+++.|+..+|+.+. ++..+..+.+ . + .+..++++|.+. +. . .+..+++.. .+.
T Consensus 188 ~~~i~~~G~~~~~K~~~~-li~a~~~l~~--~-~-------~~~~l~ivG~g~--~~--~----~~~~~~~~~----~~~ 244 (367)
T cd05844 188 PPRILFVGRFVEKKGPLL-LLEAFARLAR--R-V-------PEVRLVIIGDGP--LL--A----ALEALARAL----GLG 244 (367)
T ss_pred CcEEEEEEeeccccChHH-HHHHHHHHHH--h-C-------CCeEEEEEeCch--HH--H----HHHHHHHHc----CCC
Confidence 356889999999999998 8888776654 1 1 257899999642 11 1 233333321 134
Q ss_pred CcceEEEEcCCCHHHHhhhccCccccccCCCCC----ccCCCcchhHHhhcCceEeeecCchhHHHH
Q 003188 644 SYLKVVFVPNYNVSVAELLIPGSELSQHISTAG----MEASGTSNMKFSLNGCLIIGTLDGANVEIR 706 (840)
Q Consensus 644 ~~lkVvFl~nYnvslA~~ii~gaDv~l~iS~a~----~EAsGTs~MKam~NGal~i~tlDGanvEi~ 706 (840)
+ +|.|+....-+--..++.+||+...||..+ .|++|++-+=||..|.+.|+|-.|.+-|++
T Consensus 245 ~--~v~~~g~~~~~~l~~~~~~ad~~v~ps~~~~~~~~E~~~~~~~EA~a~G~PvI~s~~~~~~e~i 309 (367)
T cd05844 245 G--RVTFLGAQPHAEVRELMRRARIFLQPSVTAPSGDAEGLPVVLLEAQASGVPVVATRHGGIPEAV 309 (367)
T ss_pred C--eEEECCCCCHHHHHHHHHhCCEEEECcccCCCCCccCCchHHHHHHHcCCCEEEeCCCCchhhe
Confidence 5 788888776666667889999999998732 589999999999999999998777665444
No 40
>cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose. The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases.
Probab=98.71 E-value=3.2e-07 Score=101.57 Aligned_cols=124 Identities=16% Similarity=0.141 Sum_probs=91.1
Q ss_pred HhCCCCCCCCceEeecccchhhhhhhhhhhHHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHh
Q 003188 555 VTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGE 634 (840)
Q Consensus 555 ~~G~~~dp~~l~d~~vkR~heYKRq~Lnll~ii~~y~~ik~~~p~~~~~~~p~~~If~GKA~P~y~~aK~iIk~I~~la~ 634 (840)
++|+ +++.++++++.||+.+|++++ ++.++..+.+. . ...+++++|.+.+.....+++.+.+.+..
T Consensus 183 ~~~~--~~~~~~i~~vgrl~~~Kg~~~-ll~a~~~l~~~---~-------~~~~l~i~G~g~~~~~~~~~~~~~~~~~~- 248 (372)
T cd03792 183 KYGI--DPERPYITQVSRFDPWKDPFG-VIDAYRKVKER---V-------PDPQLVLVGSGATDDPEGWIVYEEVLEYA- 248 (372)
T ss_pred HhCC--CCCCcEEEEEeccccccCcHH-HHHHHHHHHhh---C-------CCCEEEEEeCCCCCCchhHHHHHHHHHHh-
Confidence 4564 478899999999999999999 88887776542 1 14789999998664333333333332211
Q ss_pred hhcCCcCCCCcceEEEEcCC--CHHHHhhhccCccccccCCCCCccCCCcchhHHhhcCceEeeecCchh
Q 003188 635 VVNTDPEVNSYLKVVFVPNY--NVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGAN 702 (840)
Q Consensus 635 ~in~d~~~~~~lkVvFl~nY--nvslA~~ii~gaDv~l~iS~a~~EAsGTs~MKam~NGal~i~tlDGan 702 (840)
...+ +|.|+... +-+....++++||++.++|+ .|..|..-+-||..|.+.|+|-.|..
T Consensus 249 ------~~~~--~v~~~~~~~~~~~~~~~~~~~ad~~v~~s~--~Eg~g~~~lEA~a~G~Pvv~s~~~~~ 308 (372)
T cd03792 249 ------EGDP--DIHVLTLPPVSDLEVNALQRASTVVLQKSI--REGFGLTVTEALWKGKPVIAGPVGGI 308 (372)
T ss_pred ------CCCC--CeEEEecCCCCHHHHHHHHHhCeEEEeCCC--ccCCCHHHHHHHHcCCCEEEcCCCCc
Confidence 2344 67787665 55666778999999999999 99999999999999999998854443
No 41
>PRK10307 putative glycosyl transferase; Provisional
Probab=98.69 E-value=1.8e-06 Score=97.15 Aligned_cols=172 Identities=12% Similarity=0.095 Sum_probs=112.9
Q ss_pred ccccccCCcccchhhhhHHHHHhhhhcCccccCCCCCcccccccCcccccccCChhhhHHHHhhcCccccccChhhHhhh
Q 003188 445 NLCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLLVGL 524 (840)
Q Consensus 445 ~lai~~S~~VNgVS~lH~eilk~~~f~~~~~l~p~k~~~iTNGI~~rrWl~~~NP~l~~li~~~~g~~~w~~~~~~l~~l 524 (840)
+.++..++.|..||+--.+.+++. .+-+.++.-|.|||+..++. |.
T Consensus 166 ~~~~~~ad~ii~~S~~~~~~~~~~------~~~~~~i~vi~ngvd~~~~~----~~------------------------ 211 (412)
T PRK10307 166 RSLLRRFDNVSTISRSMMNKAREK------GVAAEKVIFFPNWSEVARFQ----PV------------------------ 211 (412)
T ss_pred HHHHhhCCEEEecCHHHHHHHHHc------CCCcccEEEECCCcCHhhcC----CC------------------------
Confidence 344557899999999877766531 23456788888999987762 21
Q ss_pred hccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCceEeecccchhhhhhhhhhhHHHHHHHHHhhcCccccCCC
Q 003188 525 RQFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKT 604 (840)
Q Consensus 525 ~~~~~d~~~~~~~~~~K~~nK~~L~~~i~~~~G~~~dp~~l~d~~vkR~heYKRq~Lnll~ii~~y~~ik~~~p~~~~~~ 604 (840)
.+. . ... +++++|+ +++.++.+++.|+.++|+++. ++..+.++ +. .
T Consensus 212 ----~~~-------~-~~~--------~~~~~~~--~~~~~~i~~~G~l~~~kg~~~-li~a~~~l---~~-~------- 257 (412)
T PRK10307 212 ----ADA-------D-VDA--------LRAQLGL--PDGKKIVLYSGNIGEKQGLEL-VIDAARRL---RD-R------- 257 (412)
T ss_pred ----Ccc-------c-hHH--------HHHHcCC--CCCCEEEEEcCccccccCHHH-HHHHHHHh---cc-C-------
Confidence 000 0 000 1134454 456788999999999999998 88877654 22 1
Q ss_pred CCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcCCCCcceEEEEcCCCHHHHhhhccCccccccCCCCCccCCCcc-
Q 003188 605 TPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTS- 683 (840)
Q Consensus 605 ~p~~~If~GKA~P~y~~aK~iIk~I~~la~~in~d~~~~~~lkVvFl~nYnvslA~~ii~gaDv~l~iS~a~~EAsGTs- 683 (840)
.+.++++.|.+. ... .+.+.++..+ . + +|.|+....-+-...++++||+.+.+|+ .|+.|..
T Consensus 258 ~~~~l~ivG~g~-~~~-------~l~~~~~~~~----l-~--~v~f~G~~~~~~~~~~~~~aDi~v~ps~--~e~~~~~~ 320 (412)
T PRK10307 258 PDLIFVICGQGG-GKA-------RLEKMAQCRG----L-P--NVHFLPLQPYDRLPALLKMADCHLLPQK--AGAADLVL 320 (412)
T ss_pred CCeEEEEECCCh-hHH-------HHHHHHHHcC----C-C--ceEEeCCCCHHHHHHHHHhcCEeEEeec--cCcccccC
Confidence 258999999763 111 2333333211 2 2 5888865566777788999999999998 6776543
Q ss_pred ---hhHHhhcCceEeeecCch
Q 003188 684 ---NMKFSLNGCLIIGTLDGA 701 (840)
Q Consensus 684 ---~MKam~NGal~i~tlDGa 701 (840)
-.-+|..|.+.|+|..|.
T Consensus 321 p~kl~eama~G~PVi~s~~~g 341 (412)
T PRK10307 321 PSKLTNMLASGRNVVATAEPG 341 (412)
T ss_pred cHHHHHHHHcCCCEEEEeCCC
Confidence 235789999999886543
No 42
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have
Probab=98.67 E-value=1.3e-06 Score=94.08 Aligned_cols=121 Identities=17% Similarity=0.168 Sum_probs=84.6
Q ss_pred HhCCCCCCCCceEeecccchhhhhhhhhhhHHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHh
Q 003188 555 VTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGE 634 (840)
Q Consensus 555 ~~G~~~dp~~l~d~~vkR~heYKRq~Lnll~ii~~y~~ik~~~p~~~~~~~p~~~If~GKA~P~y~~aK~iIk~I~~la~ 634 (840)
..++ +++.++.+++.|+...|+..+ ++..+.++.+ . . .+.+|++.|.+.-. +.+.+++..+.
T Consensus 181 ~~~~--~~~~~~~l~~g~~~~~kg~~~-li~a~~~l~~--~-~-------~~~~l~i~G~g~~~----~~~~~~~~~~~- 242 (360)
T cd04951 181 ALGV--KNDTFVILAVGRLVEAKDYPN-LLKAFAKLLS--D-Y-------LDIKLLIAGDGPLR----ATLERLIKALG- 242 (360)
T ss_pred HcCc--CCCCEEEEEEeeCchhcCcHH-HHHHHHHHHh--h-C-------CCeEEEEEcCCCcH----HHHHHHHHhcC-
Confidence 4454 467788999999999999999 8887776643 1 1 25799999965321 22223332221
Q ss_pred hhcCCcCCCCcceEEEEcCCCHHHHhhhccCccccccCCCCCccCCCcchhHHhhcCceEeeecCchhHHHH
Q 003188 635 VVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIR 706 (840)
Q Consensus 635 ~in~d~~~~~~lkVvFl~nYnvslA~~ii~gaDv~l~iS~a~~EAsGTs~MKam~NGal~i~tlDGanvEi~ 706 (840)
..+ +|.|+.. ++-...++.+||+.+.+|+ .|..|..-+=||..|.+.|++--|..-|++
T Consensus 243 -------~~~--~v~~~g~--~~~~~~~~~~ad~~v~~s~--~e~~~~~~~Ea~a~G~PvI~~~~~~~~e~i 301 (360)
T cd04951 243 -------LSN--RVKLLGL--RDDIAAYYNAADLFVLSSA--WEGFGLVVAEAMACELPVVATDAGGVREVV 301 (360)
T ss_pred -------CCC--cEEEecc--cccHHHHHHhhceEEeccc--ccCCChHHHHHHHcCCCEEEecCCChhhEe
Confidence 334 5777653 2334567899999999999 799999999999999999988656554433
No 43
>PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=98.64 E-value=2.2e-06 Score=103.52 Aligned_cols=127 Identities=17% Similarity=0.207 Sum_probs=92.3
Q ss_pred CCCCceEeecccchhhhhhhhhhhHHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCc
Q 003188 561 DPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDP 640 (840)
Q Consensus 561 dp~~l~d~~vkR~heYKRq~Lnll~ii~~y~~ik~~~p~~~~~~~p~~~If~GKA~P~y~~aK~iIk~I~~la~~in~d~ 640 (840)
..+.+++++|.||.++|++++ ++..+.++.+ . .| ...++|.|.+. +. . .+.++++..
T Consensus 514 ~~~~~vIg~VGRL~~~KG~~~-LI~A~a~l~~--~-~p-------~~~LvIvG~G~--~~--~----~L~~l~~~l---- 570 (694)
T PRK15179 514 SDARFTVGTVMRVDDNKRPFL-WVEAAQRFAA--S-HP-------KVRFIMVGGGP--LL--E----SVREFAQRL---- 570 (694)
T ss_pred CCCCeEEEEEEeCCccCCHHH-HHHHHHHHHH--H-Cc-------CeEEEEEccCc--ch--H----HHHHHHHHc----
Confidence 345788999999999999999 8888877754 2 22 47899999863 21 1 233333322
Q ss_pred CCCCcceEEEEcCCCHHHHhhhccCccccccCCCCCccCCCcchhHHhhcCceEeeecCchhHHHHHHhcCcceEeec
Q 003188 641 EVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFG 718 (840)
Q Consensus 641 ~~~~~lkVvFl~nYnvslA~~ii~gaDv~l~iS~a~~EAsGTs~MKam~NGal~i~tlDGanvEi~~~vG~~N~~~fG 718 (840)
.+.+ +|.| .+|.-.+ ..++.+||++..+|+ +|..|..=+=+|..|.+.|+|.-|..-|+++. ++|+|++.
T Consensus 571 gL~~--~V~f-lG~~~dv-~~ll~aaDv~VlpS~--~Egfp~vlLEAMA~G~PVVat~~gG~~EiV~d--g~~GlLv~ 640 (694)
T PRK15179 571 GMGE--RILF-TGLSRRV-GYWLTQFNAFLLLSR--FEGLPNVLIEAQFSGVPVVTTLAGGAGEAVQE--GVTGLTLP 640 (694)
T ss_pred CCCC--cEEE-cCCcchH-HHHHHhcCEEEeccc--cccchHHHHHHHHcCCeEEEECCCChHHHccC--CCCEEEeC
Confidence 2445 5555 4554444 467899999999999 99999999999999999999988877776654 35666653
No 44
>cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=98.64 E-value=1.7e-06 Score=93.10 Aligned_cols=126 Identities=17% Similarity=0.107 Sum_probs=91.9
Q ss_pred CCCceEeecccchhhhhhhhhhhHHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcC
Q 003188 562 PNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPE 641 (840)
Q Consensus 562 p~~l~d~~vkR~heYKRq~Lnll~ii~~y~~ik~~~p~~~~~~~p~~~If~GKA~P~y~~aK~iIk~I~~la~~in~d~~ 641 (840)
.+.+.++++.|+.++|+.+. ++.++.++. +..++++|.+.... .+.+++... .
T Consensus 189 ~~~~~i~~~G~~~~~K~~~~-li~a~~~l~--------------~~~l~i~G~g~~~~----~~~~~~~~~--------~ 241 (357)
T cd03795 189 AGRPFFLFVGRLVYYKGLDV-LLEAAAALP--------------DAPLVIVGEGPLEA----ELEALAAAL--------G 241 (357)
T ss_pred CCCcEEEEecccccccCHHH-HHHHHHhcc--------------CcEEEEEeCChhHH----HHHHHHHhc--------C
Confidence 45678999999999999998 777665431 46899999874322 222222222 2
Q ss_pred CCCcceEEEEcCCCHHHHhhhccCccccccCCCCCccCCCcchhHHhhcCceEeeecCchhHHHHHHhcCcceEee
Q 003188 642 VNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLF 717 (840)
Q Consensus 642 ~~~~lkVvFl~nYnvslA~~ii~gaDv~l~iS~a~~EAsGTs~MKam~NGal~i~tlDGanvEi~~~vG~~N~~~f 717 (840)
... +|.|++..+-+....++..||+..+||....|..|++-+-||..|.+.|+|-.|+.-|.... .++|++++
T Consensus 242 ~~~--~V~~~g~v~~~~~~~~~~~ad~~i~ps~~~~e~~g~~~~Ea~~~g~Pvi~~~~~~~~~~i~~-~~~~g~~~ 314 (357)
T cd03795 242 LLD--RVRFLGRLDDEEKAALLAACDVFVFPSVERSEAFGIVLLEAMAFGKPVISTEIGTGGSYVNL-HGVTGLVV 314 (357)
T ss_pred Ccc--eEEEcCCCCHHHHHHHHHhCCEEEeCCcccccccchHHHHHHHcCCCEEecCCCCchhHHhh-CCCceEEe
Confidence 344 79999988877777888999999999987789999999999999999999977766554443 23444443
No 45
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=98.59 E-value=6.2e-07 Score=100.38 Aligned_cols=183 Identities=17% Similarity=0.222 Sum_probs=122.3
Q ss_pred ccccccCCcccchhhhhHHHHHhhhhcCccccCCCCCcccccccCcccccccCChhhhHHHHhhcCccccccChhhHhhh
Q 003188 445 NLCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLLVGL 524 (840)
Q Consensus 445 ~lai~~S~~VNgVS~lH~eilk~~~f~~~~~l~p~k~~~iTNGI~~rrWl~~~NP~l~~li~~~~g~~~w~~~~~~l~~l 524 (840)
.+++..++.|-.+|+...+.+.. .+++++.-|.|||+...+ .|.-
T Consensus 151 ~~~~~~ad~vi~~s~~~~~~~~~--------~~~~ki~vI~ngvd~~~f----~~~~----------------------- 195 (396)
T cd03818 151 LLALAQADAGVSPTRWQRSTFPA--------ELRSRISVIHDGIDTDRL----RPDP----------------------- 195 (396)
T ss_pred HHHHHhCCEEECCCHHHHhhCcH--------hhccceEEeCCCcccccc----CCCc-----------------------
Confidence 45666788888888876554432 235788889999998766 2210
Q ss_pred hccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCceEeeccc-chhhhhhhhhhhHHHHHHHHHhhcCccccCC
Q 003188 525 RQFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQVKR-IHEYKRQLLNILGAIYRYKKLKEMSPQERKK 603 (840)
Q Consensus 525 ~~~~~d~~~~~~~~~~K~~nK~~L~~~i~~~~G~~~dp~~l~d~~vkR-~heYKRq~Lnll~ii~~y~~ik~~~p~~~~~ 603 (840)
. - ..+ + ..+..+.++.++++++.| +..+|+.++ ++..+.++.+ . .|
T Consensus 196 -----~------~-~~~------~------~~~~~~~~~~~~i~~vgR~l~~~Kg~~~-ll~a~~~l~~--~-~~----- 242 (396)
T cd03818 196 -----Q------A-RLR------L------PNGRVLTPGDEVITFVARNLEPYRGFHV-FMRALPRLLR--A-RP----- 242 (396)
T ss_pred -----h------h-hhc------c------cccccCCCCCeEEEEECCCcccccCHHH-HHHHHHHHHH--H-CC-----
Confidence 0 0 000 0 011124567788899998 999999999 9888877654 2 22
Q ss_pred CCCeEEEEEecCCcCCHHH----H-HHHHHHHHHHhhhcCCcCCCCcceEEEEcCCCHHHHhhhccCccccccCCCCCcc
Q 003188 604 TTPRTIMIGGKAFATYTNA----K-RIVKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGME 678 (840)
Q Consensus 604 ~~p~~~If~GKA~P~y~~a----K-~iIk~I~~la~~in~d~~~~~~lkVvFl~nYnvslA~~ii~gaDv~l~iS~a~~E 678 (840)
++.+++.|.+.|.|... . ..-+++..++... -.+ +|.|+....-+-...++.+||+...+|. .|
T Consensus 243 --~~~lvivG~~~~~~g~~~~~~~~~~~~~~~~~~~~~-----~~~--~V~f~G~v~~~~~~~~l~~adv~v~~s~--~e 311 (396)
T cd03818 243 --DARVVIVGGDGVSYGAPPPDGESWKQHMLDELGGRL-----DLS--RVHFLGRVPYDQYLALLQVSDVHVYLTY--PF 311 (396)
T ss_pred --CcEEEEEcCCCcccCCCCCCcccHHHHHHHHhhccc-----Ccc--eEEEeCCCCHHHHHHHHHhCcEEEEcCc--cc
Confidence 57899999866654321 1 1112334444211 123 7888877665556678899999999999 78
Q ss_pred CCCcchhHHhhcCceEeeecCchhHHHH
Q 003188 679 ASGTSNMKFSLNGCLIIGTLDGANVEIR 706 (840)
Q Consensus 679 AsGTs~MKam~NGal~i~tlDGanvEi~ 706 (840)
..|.+-+-||.-|.+.|+|-.|..-|++
T Consensus 312 ~~~~~llEAmA~G~PVIas~~~g~~e~i 339 (396)
T cd03818 312 VLSWSLLEAMACGCLVVGSDTAPVREVI 339 (396)
T ss_pred ccchHHHHHHHCCCCEEEcCCCCchhhc
Confidence 9999999999999999999777655544
No 46
>cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases. wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis.
Probab=98.57 E-value=2.8e-06 Score=91.66 Aligned_cols=167 Identities=12% Similarity=0.057 Sum_probs=111.9
Q ss_pred ccCCcccchhhhhHHHHHhhhhcCccccCCCCCcccccccCcccccccCChhhhHHHHhhcCccccccChhhHhhhhccC
Q 003188 449 VSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLLVGLRQFA 528 (840)
Q Consensus 449 ~~S~~VNgVS~lH~eilk~~~f~~~~~l~p~k~~~iTNGI~~rrWl~~~NP~l~~li~~~~g~~~w~~~~~~l~~l~~~~ 528 (840)
..+..+-.+|....+.+++. ..+-+.++.-+-|||+...+ .|.
T Consensus 134 ~~~~~~v~~s~~~~~~~~~~-----~~~~~~~~~vi~ngi~~~~~----~~~---------------------------- 176 (365)
T cd03825 134 DLNLTIVAPSRWLADCARSS-----SLFKGIPIEVIPNGIDTTIF----RPR---------------------------- 176 (365)
T ss_pred cCCcEEEehhHHHHHHHHhc-----cccCCCceEEeCCCCccccc----CCC----------------------------
Confidence 34556777887766666542 12234577888899988776 220
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCceEeecccchh--hhhhhhhhhHHHHHHHHHhhcCccccCCCCC
Q 003188 529 DNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQVKRIHE--YKRQLLNILGAIYRYKKLKEMSPQERKKTTP 606 (840)
Q Consensus 529 ~d~~~~~~~~~~K~~nK~~L~~~i~~~~G~~~dp~~l~d~~vkR~he--YKRq~Lnll~ii~~y~~ik~~~p~~~~~~~p 606 (840)
+. - .. ++..+++ ++..+..++.|... +|+.++ ++..+..+.+. . ..+
T Consensus 177 -~~-----~-~~------------~~~~~~~--~~~~~i~~~~~~~~~~~K~~~~-ll~a~~~l~~~-~--------~~~ 225 (365)
T cd03825 177 -DK-----R-EA------------RKRLGLP--ADKKIILFGAVGGTDPRKGFDE-LIEALKRLAER-W--------KDD 225 (365)
T ss_pred -cH-----H-HH------------HHHhCCC--CCCeEEEEEecCCCccccCHHH-HHHHHHHhhhc-c--------CCC
Confidence 10 0 00 1233443 45556666777665 899998 88877665431 0 126
Q ss_pred eEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcCCCCcceEEEEcCCC-HHHHhhhccCccccccCCCCCccCCCcchh
Q 003188 607 RTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYLKVVFVPNYN-VSVAELLIPGSELSQHISTAGMEASGTSNM 685 (840)
Q Consensus 607 ~~~If~GKA~P~y~~aK~iIk~I~~la~~in~d~~~~~~lkVvFl~nYn-vslA~~ii~gaDv~l~iS~a~~EAsGTs~M 685 (840)
.++++.|.+.+.... ...+ +|.|+.... ...-..++..||+.+++|+ .|+.|++-+
T Consensus 226 ~~~~i~G~~~~~~~~-------------------~~~~--~v~~~g~~~~~~~~~~~~~~ad~~l~ps~--~e~~g~~~~ 282 (365)
T cd03825 226 IELVVFGASDPEIPP-------------------DLPF--PVHYLGSLNDDESLALIYSAADVFVVPSL--QENFPNTAI 282 (365)
T ss_pred eEEEEeCCCchhhhc-------------------cCCC--ceEecCCcCCHHHHHHHHHhCCEEEeccc--cccccHHHH
Confidence 899999987664331 1233 677777766 5556678899999999999 899999999
Q ss_pred HHhhcCceEeeecCchhHHHH
Q 003188 686 KFSLNGCLIIGTLDGANVEIR 706 (840)
Q Consensus 686 Kam~NGal~i~tlDGanvEi~ 706 (840)
-||..|.+.|++-.|...|++
T Consensus 283 Eam~~g~PvI~~~~~~~~e~~ 303 (365)
T cd03825 283 EALACGTPVVAFDVGGIPDIV 303 (365)
T ss_pred HHHhcCCCEEEecCCCChhhe
Confidence 999999999988666654443
No 47
>PHA01633 putative glycosyl transferase group 1
Probab=98.57 E-value=7.6e-07 Score=99.04 Aligned_cols=185 Identities=12% Similarity=0.107 Sum_probs=123.9
Q ss_pred CCCceEeecccchhhhhhhhhhhHHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcC
Q 003188 562 PNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPE 641 (840)
Q Consensus 562 p~~l~d~~vkR~heYKRq~Lnll~ii~~y~~ik~~~p~~~~~~~p~~~If~GKA~P~y~~aK~iIk~I~~la~~in~d~~ 641 (840)
|+.+..+++.|++.+|++++ ++..+.++.+ . .|+. ....+++++|.+ .+.++ .
T Consensus 146 ~~~~~i~~vGRl~~~KG~~~-LI~A~~~L~~--~-~p~~---~~~i~l~ivG~~------------~~~~l--------~ 198 (335)
T PHA01633 146 PDTIKFGIVSGLTKRKNMDL-MLQVFNELNT--K-YPDI---AKKIHFFVISHK------------QFTQL--------E 198 (335)
T ss_pred CCCeEEEEEeCCccccCHHH-HHHHHHHHHH--h-CCCc---cccEEEEEEcHH------------HHHHc--------C
Confidence 46788899999999999999 9998887754 2 2221 013567777731 11111 2
Q ss_pred CCCcceEEEEcCCC---HHHHhhhccCccccccCCCCCccCCCcchhHHhhcCceEeeecCchhHHHHHHhcCcceEeec
Q 003188 642 VNSYLKVVFVPNYN---VSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFG 718 (840)
Q Consensus 642 ~~~~lkVvFl~nYn---vslA~~ii~gaDv~l~iS~a~~EAsGTs~MKam~NGal~i~tlDGanvEi~~~vG~~N~~~fG 718 (840)
+++ +|.|+-.++ -+-...++++||+++.||+ .|++|...+-||..|++.|++.-|...|+ +|+...++|
T Consensus 199 l~~--~V~f~g~~G~~~~~dl~~~y~~aDifV~PS~--~EgfGlvlLEAMA~G~PVVas~~~~l~Ei---~g~~~~~Li- 270 (335)
T PHA01633 199 VPA--NVHFVAEFGHNSREYIFAFYGAMDFTIVPSG--TEGFGMPVLESMAMGTPVIHQLMPPLDEF---TSWQWNLLI- 270 (335)
T ss_pred CCC--cEEEEecCCCCCHHHHHHHHHhCCEEEECCc--cccCCHHHHHHHHcCCCEEEccCCCceee---cCCccceee-
Confidence 456 788886442 3445678999999999999 89999999999999999999987776554 455333555
Q ss_pred CccccchhhhhhccCCCCCCChhHHHHHHHHhcCC-CCCCChHHHHHHHhhCCCCCCCccccccCChHHHHHHHHHHHHH
Q 003188 719 AVAEQVPKLRKEREDGLFKPDPRFEEAKQFIRSGA-FGSYDYNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQA 797 (840)
Q Consensus 719 ~~~d~V~~~~~~~~y~~~~~~~~l~~v~~~~~~G~-f~~~~~~~l~~~L~~~~~~~~~D~~~~~~Df~~y~~~~~~~~~~ 797 (840)
.+|+|.++.. +. -+.|+ |.+.+.++|.++|. ++...
T Consensus 271 -~~~~v~~~~~-----~~------------~g~g~~~~~~d~~~la~ai~-------------------------~~~~~ 307 (335)
T PHA01633 271 -KSSKVEEYYD-----KE------------HGQKWKIHKFQIEDMANAII-------------------------LAFEL 307 (335)
T ss_pred -CCCCHHHhcC-----cc------------cCceeeecCCCHHHHHHHHH-------------------------HHHhc
Confidence 4566665421 10 13454 66778899988886 55555
Q ss_pred hcCHHHHHHHHHHHhccCCCCChHHHHHHHH
Q 003188 798 YKDQKKWLKMSILSTAGSGKFSSDRTIAQYA 828 (840)
Q Consensus 798 Y~d~~~W~~~~~~n~a~~g~FSsDrti~eYa 828 (840)
+....+ .+.....|. .|+|++-.++|.
T Consensus 308 ~~~~~~--~~~~~~~a~--~f~~~~~~~~~~ 334 (335)
T PHA01633 308 QDREER--SMKLKELAK--KYDIRNLYTRFL 334 (335)
T ss_pred cChhhh--hHHHHHHHH--hcCHHHHHHHhh
Confidence 422222 333334444 799999888874
No 48
>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=98.56 E-value=1.4e-06 Score=95.96 Aligned_cols=121 Identities=20% Similarity=0.207 Sum_probs=84.4
Q ss_pred CCCceEeecccchhhhhhhhhhhHHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcC
Q 003188 562 PNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPE 641 (840)
Q Consensus 562 p~~l~d~~vkR~heYKRq~Lnll~ii~~y~~ik~~~p~~~~~~~p~~~If~GKA~P~y~~aK~iIk~I~~la~~in~d~~ 641 (840)
++.+.++++.|+.++|++++ ++..+..+.+ . .|.. ..+.++++.|.+... +.+.+++.+. .
T Consensus 192 ~~~~~i~~vGrl~~~Kg~~~-li~a~~~l~~--~-~~~~---~~~~~l~i~G~g~~~----~~~~~~~~~~--------~ 252 (374)
T TIGR03088 192 DESVVVGTVGRLQAVKDQPT-LVRAFALLVR--Q-LPEG---AERLRLVIVGDGPAR----GACEQMVRAA--------G 252 (374)
T ss_pred CCCeEEEEEecCCcccCHHH-HHHHHHHHHH--h-Cccc---ccceEEEEecCCchH----HHHHHHHHHc--------C
Confidence 46789999999999999999 8888877754 2 2210 125899999976321 2222233222 1
Q ss_pred CCCcceEEEEcCCCHHHHhhhccCccccccCCCCCccCCCcchhHHhhcCceEeeecCchhHHHHH
Q 003188 642 VNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQ 707 (840)
Q Consensus 642 ~~~~lkVvFl~nYnvslA~~ii~gaDv~l~iS~a~~EAsGTs~MKam~NGal~i~tlDGanvEi~~ 707 (840)
+.+ .+++.++.-. -..++++||+..+||. .|++|.+-+=||..|.+.|+|--|..-|+++
T Consensus 253 ~~~---~v~~~g~~~~-~~~~~~~adi~v~pS~--~Eg~~~~~lEAma~G~Pvv~s~~~g~~e~i~ 312 (374)
T TIGR03088 253 LAH---LVWLPGERDD-VPALMQALDLFVLPSL--AEGISNTILEAMASGLPVIATAVGGNPELVQ 312 (374)
T ss_pred Ccc---eEEEcCCcCC-HHHHHHhcCEEEeccc--cccCchHHHHHHHcCCCEEEcCCCCcHHHhc
Confidence 334 3444454333 4567799999999999 8999999999999999999886666555443
No 49
>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases. Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide.
Probab=98.55 E-value=1e-06 Score=93.62 Aligned_cols=122 Identities=15% Similarity=0.111 Sum_probs=92.9
Q ss_pred CCCCceEeecccchhhhhhhhhhhHHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCc
Q 003188 561 DPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDP 640 (840)
Q Consensus 561 dp~~l~d~~vkR~heYKRq~Lnll~ii~~y~~ik~~~p~~~~~~~p~~~If~GKA~P~y~~aK~iIk~I~~la~~in~d~ 640 (840)
.++.+..+++.|+.+.|+.++ ++.++.++.+- . .+.++++.|++.+.+.... ..+++. .
T Consensus 200 ~~~~~~i~~~G~~~~~K~~~~-li~a~~~l~~~---~-------~~~~l~i~G~~~~~~~~~~------~~~~~~----~ 258 (375)
T cd03821 200 LPDKRIILFLGRLHPKKGLDL-LIEAFAKLAER---F-------PDWHLVIAGPDEGGYRAEL------KQIAAA----L 258 (375)
T ss_pred CCCCcEEEEEeCcchhcCHHH-HHHHHHHhhhh---c-------CCeEEEEECCCCcchHHHH------HHHHHh----c
Confidence 467788999999999999998 88887776541 1 2689999999887776532 222221 1
Q ss_pred CCCCcceEEEEcCCCHHHHhhhccCccccccCCCCCccCCCcchhHHhhcCceEeeecCchhHHHHH
Q 003188 641 EVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQ 707 (840)
Q Consensus 641 ~~~~~lkVvFl~nYnvslA~~ii~gaDv~l~iS~a~~EAsGTs~MKam~NGal~i~tlDGanvEi~~ 707 (840)
...+ +|.|+....-+--..++..||+..++|+ .|.+|++-+-+|..|.+.|+|-.|...|++.
T Consensus 259 ~~~~--~v~~~g~~~~~~~~~~~~~adv~v~ps~--~e~~~~~~~Eama~G~PvI~~~~~~~~~~~~ 321 (375)
T cd03821 259 GLED--RVTFTGMLYGEDKAAALADADLFVLPSH--SENFGIVVAEALACGTPVVTTDKVPWQELIE 321 (375)
T ss_pred Cccc--eEEEcCCCChHHHHHHHhhCCEEEeccc--cCCCCcHHHHHHhcCCCEEEcCCCCHHHHhh
Confidence 2445 6888877665556667888999999999 6999999999999999999987776655443
No 50
>PF05693 Glycogen_syn: Glycogen synthase; InterPro: IPR008631 This family consists of the eukaryotic glycogen synthase proteins GYS1, GYS2 and GYS3. Glycogen synthase (GS) is the enzyme responsible for the synthesis of -1,4-linked glucose chains in glycogen. It is the rate limiting enzyme in the synthesis of the polysaccharide, and its activity is highly regulated through phosphorylation at multiple sites and also by allosteric effectors, mainly glucose 6-phosphate (G6P) [].; GO: 0004373 glycogen (starch) synthase activity, 0005978 glycogen biosynthetic process; PDB: 3NB0_C 3RT1_C 3RSZ_D 3O3C_B 3NAZ_B 3NCH_D.
Probab=98.54 E-value=2.7e-06 Score=99.56 Aligned_cols=285 Identities=17% Similarity=0.228 Sum_probs=158.5
Q ss_pred hhhHHHHhHHHHHHHHHHHcccCcccccCCCceEEEeCCCcccccHHHHHHHHHhhcCCChhHHhhhcCccEEEeecCCh
Q 003188 302 QQFFLCSASLQDMILRFKERKSGRQWSEFPSKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVL 381 (840)
Q Consensus 302 Qeyfl~~a~lqdiir~~~~~~g~~~l~~l~~~~viHlNDtHpalaipElmR~l~d~~~l~~~~A~~i~~~~~vfT~HT~~ 381 (840)
+-..||.++-+ .|..|.+.. .. ..+++.|.|||-+++++ -++|.. ...-.+|||+|--+
T Consensus 120 ea~~Fgyava~-fi~~f~~~~----~~--~~~ViaHfHEWmaG~gl-l~lr~~-------------~~~VaTvFTTHAT~ 178 (633)
T PF05693_consen 120 EAVMFGYAVAW-FIEEFYKFY----EE--KPKVIAHFHEWMAGVGL-LYLRKR-------------KPDVATVFTTHATL 178 (633)
T ss_dssp HHHHHHHHHHH-HHHHHHHH-----S---SEEEEEEEESGGGTTHH-HHHHHT-------------T-SCEEEEEESS-H
T ss_pred HHHHHHHHHHH-HHHHHHHhh----cC--CCcEEEEechHhHhHHH-HHHhcc-------------CCCeeEEEEecccc
Confidence 33567766543 345554433 11 46789999999999985 455642 14567999999654
Q ss_pred h------------hhHhhccHHHHHhhchhHHHHHHHHHHHHHHHHHHhcCCCcccccccccccCCCCCCcccccccccc
Q 003188 382 P------------EALEKWSQAVMWKLLPRHMEIIEEIDKRFIAMVRSTRSDLESKIPSMCILDNNPKKPVVRMANLCVV 449 (840)
Q Consensus 382 ~------------eglE~w~~~l~~~lLPr~~~ii~~in~~f~~~~~~~~~~~~~~~~~~~iie~~~~~~~v~Ma~lai~ 449 (840)
. .-+++|+.+.+.. ..+| . .+..|-+.|..
T Consensus 179 lGR~l~~~~~~~Y~~L~~~~~d~eA~--------------------------------~~~i-~-----~k~~iEraaA~ 220 (633)
T PF05693_consen 179 LGRYLAANNKDFYNNLDKFNGDQEAG--------------------------------ERNI-Y-----HKHSIERAAAH 220 (633)
T ss_dssp HHHHHTTTSS-TTTSGTTS-HHHHHH--------------------------------HTT--H-----HHHHHHHHHHH
T ss_pred hhhHhhcCCCcHHHHhhccCcccccc--------------------------------Cccc-h-----HHHHHHHHHHH
Confidence 3 1122222221110 1111 1 15788889999
Q ss_pred cCCcccchhhhhHHHHHhhhhcCccccCCCCCcccccccCcccccccCChhhhHHHHhhcCccccccChhhHhhhhccCC
Q 003188 450 SAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLLVGLRQFAD 529 (840)
Q Consensus 450 ~S~~VNgVS~lH~eilk~~~f~~~~~l~p~k~~~iTNGI~~rrWl~~~NP~l~~li~~~~g~~~w~~~~~~l~~l~~~~~ 529 (840)
.+|..++||.+=+.+.+. .++ -.|+-+. -||++.... | .
T Consensus 221 ~AdvFTTVSeITa~Ea~~-LL~----r~pDvV~--pNGl~v~~~-----~-----------------------------~ 259 (633)
T PF05693_consen 221 YADVFTTVSEITAKEAEH-LLK----RKPDVVT--PNGLNVDKF-----P-----------------------------A 259 (633)
T ss_dssp HSSEEEESSHHHHHHHHH-HHS----S--SEE------B-GGGT-----S-----------------------------S
T ss_pred hcCeeeehhhhHHHHHHH-HhC----CCCCEEc--CCCcccccc-----c-----------------------------c
Confidence 999999999998888874 332 1232222 389886655 1 1
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHh-C-CCCCCC-CceEeecccc-hhhhhhhhhhhHHHHHHHHHhhcCccccCCCC
Q 003188 530 NTELQAEWESAKMASKKHLADYIWRVT-G-VTIDPN-SLFDIQVKRI-HEYKRQLLNILGAIYRYKKLKEMSPQERKKTT 605 (840)
Q Consensus 530 d~~~~~~~~~~K~~nK~~L~~~i~~~~-G-~~~dp~-~l~d~~vkR~-heYKRq~Lnll~ii~~y~~ik~~~p~~~~~~~ 605 (840)
..+ ++..|..+|+++.++++..+ | .++||| .++...+.|. =.-||.++ .+..|.|+.+....... +.+
T Consensus 260 ~~e----fqnl~~~~k~ki~~fv~~~f~g~~dfd~d~tl~~ftsGRYEf~NKG~D~-fieAL~rLn~~lk~~~~---~~t 331 (633)
T PF05693_consen 260 LHE----FQNLHAKAKEKIHEFVRGHFYGHYDFDLDKTLYFFTSGRYEFRNKGIDV-FIEALARLNHRLKQAGS---DKT 331 (633)
T ss_dssp TTH----HHHHHHHHHHHHHHHHHHHSTT---S-GGGEEEEEEESSS-TTTTTHHH-HHHHHHHHHHHHHHTT----S-E
T ss_pred chH----HHHHHHHHHHHHHHHHHHHhcccCCCCccceEEEEeeeceeeecCCccH-HHHHHHHHHHHHhhcCC---CCe
Confidence 222 45788999999999998876 3 466765 6677777887 35699999 99999999865331111 111
Q ss_pred CeEEEEEecCCcC--------CHHHHHHHHHHHHHHhhh-----------------------------------------
Q 003188 606 PRTIMIGGKAFAT--------YTNAKRIVKLVNDVGEVV----------------------------------------- 636 (840)
Q Consensus 606 p~~~If~GKA~P~--------y~~aK~iIk~I~~la~~i----------------------------------------- 636 (840)
=+.||+.=...-+ ....|++-.-++++.+.|
T Consensus 332 VVaFii~pa~~~~~~ve~l~~~a~~~~l~~t~~~i~~~~g~~~~~~~~~~~~p~~~~~~~~~~~~~lkr~i~~~~r~~lP 411 (633)
T PF05693_consen 332 VVAFIIVPAKTNSFNVESLKGQAVTKQLRDTVDEIQEKIGKRLFESCLSGRLPDLNELLDKEDIVRLKRCIFALQRNSLP 411 (633)
T ss_dssp EEEEEE---SEEEE-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSS-SHHHCS-HHHHHHHHHHHHTT--T---
T ss_pred EEEEEEecCccCCcCHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCChHHhcChhhHHHHHHHHHHhccCCCC
Confidence 1223332111111 111122211111111111
Q ss_pred ----------cCCcC------------CCCcceEEEEcCC--------CHHHHhhhccCccccccCCCCCccCCCcchhH
Q 003188 637 ----------NTDPE------------VNSYLKVVFVPNY--------NVSVAELLIPGSELSQHISTAGMEASGTSNMK 686 (840)
Q Consensus 637 ----------n~d~~------------~~~~lkVvFl~nY--------nvslA~~ii~gaDv~l~iS~a~~EAsGTs~MK 686 (840)
.+||. -.++.||+|+|-| |+.. .-++.|||+-.-||. +||-|-.-+-
T Consensus 412 Pi~TH~l~d~~~DpILn~irr~~L~N~~~drVKVIF~P~yL~~~dgif~l~Y-~dfv~GcdLgvFPSY--YEPWGYTPlE 488 (633)
T PF05693_consen 412 PITTHNLHDDSNDPILNMIRRLGLFNNPEDRVKVIFHPEYLSGTDGIFNLDY-YDFVRGCDLGVFPSY--YEPWGYTPLE 488 (633)
T ss_dssp -SBSEEETTTTT-HHHHHHHHTT----TT-SEEEEE--S---TTSSSS-S-H-HHHHHHSSEEEE--S--SBSS-HHHHH
T ss_pred CeeeeCCCCCccCHHHHHHHhCCCCCCCCCceEEEEeeccccCCCCCCCCCH-HHHhccCceeeeccc--cccccCChHH
Confidence 23332 3467999999987 3332 346799999999999 9999999999
Q ss_pred HhhcCceEeee
Q 003188 687 FSLNGCLIIGT 697 (840)
Q Consensus 687 am~NGal~i~t 697 (840)
+...|.++|.|
T Consensus 489 ~~a~gVPsITT 499 (633)
T PF05693_consen 489 CTAFGVPSITT 499 (633)
T ss_dssp HHHTT--EEEE
T ss_pred HhhcCCceeec
Confidence 99999999977
No 51
>TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming]. This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib
Probab=98.50 E-value=2.3e-05 Score=90.82 Aligned_cols=130 Identities=13% Similarity=0.114 Sum_probs=85.8
Q ss_pred CCceEeecccchhhhhhhhhhhHHHHHHHHHhhcCccccCCCCCeEEEEEecCC-cCCHHHHHHHHHHHHHHhhhcCCcC
Q 003188 563 NSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAF-ATYTNAKRIVKLVNDVGEVVNTDPE 641 (840)
Q Consensus 563 ~~l~d~~vkR~heYKRq~Lnll~ii~~y~~ik~~~p~~~~~~~p~~~If~GKA~-P~y~~aK~iIk~I~~la~~in~d~~ 641 (840)
+..+++.|.|++..|+... ++..+.++.+ + +|+.+ ..+++|..|... ..-..-.++.+.+.+++..||..-.
T Consensus 258 ~~~vIl~VgRLd~~KGi~~-ll~A~~~ll~--~-~p~~~---~~v~Lv~v~~p~rg~~~~~~~l~~~i~~lv~~in~~~~ 330 (456)
T TIGR02400 258 GRKLIIGVDRLDYSKGLPE-RLLAFERFLE--E-HPEWR---GKVVLVQIAVPSRGDVPEYQQLRRQVEELVGRINGRFG 330 (456)
T ss_pred CCeEEEEccccccccCHHH-HHHHHHHHHH--h-Ccccc---CceEEEEEecCCccCchHHHHHHHHHHHHHHHHHhccC
Confidence 5578889999999999999 9999888865 3 44321 135566554222 1112223456677777766664211
Q ss_pred CCCcceEEEEcC-CCHHHHhhhccCccccccCCCCCccCCCcchhHHhhcCce-----EeeecCch
Q 003188 642 VNSYLKVVFVPN-YNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCL-----IIGTLDGA 701 (840)
Q Consensus 642 ~~~~lkVvFl~n-YnvslA~~ii~gaDv~l~iS~a~~EAsGTs~MKam~NGal-----~i~tlDGa 701 (840)
..+...|+|+.. .+-+---.++.+||+.+.+|+ .|.-|+.-+=||.-|.. .+|...|+
T Consensus 331 ~~~~~pv~~l~~~~~~~el~aly~aaDv~vv~S~--~EG~~Lv~lEamA~g~P~~g~vVlS~~~G~ 394 (456)
T TIGR02400 331 TLDWTPIRYLNRSYDREELMALYRAADVGLVTPL--RDGMNLVAKEYVAAQDPKDGVLILSEFAGA 394 (456)
T ss_pred CCCCccEEEEcCCCCHHHHHHHHHhCcEEEECcc--ccccCccHHHHHHhcCCCCceEEEeCCCCC
Confidence 112223666664 344555567899999999999 89999999999988775 55544444
No 52
>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold.
Probab=98.48 E-value=1.8e-05 Score=83.03 Aligned_cols=120 Identities=16% Similarity=0.122 Sum_probs=86.8
Q ss_pred CCCCceEeecccchhhhhhhhhhhHHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCc
Q 003188 561 DPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDP 640 (840)
Q Consensus 561 dp~~l~d~~vkR~heYKRq~Lnll~ii~~y~~ik~~~p~~~~~~~p~~~If~GKA~P~y~~aK~iIk~I~~la~~in~d~ 640 (840)
.++.+..+++.|+...|+... ++..+..+.+ . + ..+++++.|.+ +... .+....+. .
T Consensus 196 ~~~~~~i~~~g~~~~~k~~~~-~i~~~~~~~~--~-~-------~~~~l~i~G~~-~~~~-------~~~~~~~~----~ 252 (374)
T cd03801 196 PEDEPVILFVGRLVPRKGVDL-LLEALAKLRK--E-Y-------PDVRLVIVGDG-PLRE-------ELEALAAE----L 252 (374)
T ss_pred cCCCeEEEEecchhhhcCHHH-HHHHHHHHhh--h-c-------CCeEEEEEeCc-HHHH-------HHHHHHHH----h
Confidence 356788999999999999988 8777666543 1 1 25789999922 1111 12222221 1
Q ss_pred CCCCcceEEEEcCCCHHHHhhhccCccccccCCCCCccCCCcchhHHhhcCceEeeecCchhHHHHH
Q 003188 641 EVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQ 707 (840)
Q Consensus 641 ~~~~~lkVvFl~nYnvslA~~ii~gaDv~l~iS~a~~EAsGTs~MKam~NGal~i~tlDGanvEi~~ 707 (840)
..++ +|.|.....-+-...++..||+..++|+ .|++|+.-+-+|..|.+.|+|-.|+.-|+.+
T Consensus 253 ~~~~--~v~~~g~~~~~~~~~~~~~~di~i~~~~--~~~~~~~~~Ea~~~g~pvI~~~~~~~~~~~~ 315 (374)
T cd03801 253 GLGD--RVTFLGFVPDEDLPALYAAADVFVLPSL--YEGFGLVLLEAMAAGLPVVASDVGGIPEVVE 315 (374)
T ss_pred CCCc--ceEEEeccChhhHHHHHHhcCEEEecch--hccccchHHHHHHcCCcEEEeCCCChhHHhc
Confidence 2445 7888888776667778899999999999 6999999999999999999887676644443
No 53
>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases. wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS.
Probab=98.47 E-value=1.2e-05 Score=84.78 Aligned_cols=171 Identities=21% Similarity=0.191 Sum_probs=117.8
Q ss_pred ccCCcccchhhhhHHHHHhhhhcCccccCCCCCcccccccCcccccccCChhhhHHHHhhcCccccccChhhHhhhhccC
Q 003188 449 VSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLLVGLRQFA 528 (840)
Q Consensus 449 ~~S~~VNgVS~lH~eilk~~~f~~~~~l~p~k~~~iTNGI~~rrWl~~~NP~l~~li~~~~g~~~w~~~~~~l~~l~~~~ 528 (840)
..++.+..+|+...+.+++. . ..+.++.-+.||++...|. +.
T Consensus 147 ~~~d~ii~~s~~~~~~~~~~-----~-~~~~~~~~i~~~~~~~~~~----~~---------------------------- 188 (377)
T cd03798 147 RRADAVIAVSEALADELKAL-----G-IDPEKVTVIPNGVDTERFS----PA---------------------------- 188 (377)
T ss_pred hcCCeEEeCCHHHHHHHHHh-----c-CCCCceEEcCCCcCcccCC----Cc----------------------------
Confidence 35677888888877777642 1 3346677788999887662 10
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCceEeecccchhhhhhhhhhhHHHHHHHHHhhcCccccCCCCCeE
Q 003188 529 DNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRT 608 (840)
Q Consensus 529 ~d~~~~~~~~~~K~~nK~~L~~~i~~~~G~~~dp~~l~d~~vkR~heYKRq~Lnll~ii~~y~~ik~~~p~~~~~~~p~~ 608 (840)
+. .+. .+.+ .+.+.+..+++.|+...|+... ++..+..+.+. + .+.+
T Consensus 189 ~~---------~~~-----------~~~~--~~~~~~~i~~~g~~~~~k~~~~-li~~~~~~~~~---~-------~~~~ 235 (377)
T cd03798 189 DR---------AEA-----------RKLG--LPEDKKVILFVGRLVPRKGIDY-LIEALARLLKK---R-------PDVH 235 (377)
T ss_pred ch---------HHH-----------Hhcc--CCCCceEEEEeccCccccCHHH-HHHHHHHHHhc---C-------CCeE
Confidence 00 000 1222 2346688999999999999998 88877766431 1 2689
Q ss_pred EEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcCCCCcceEEEEcCCCHHHHhhhccCccccccCCCCCccCCCcchhHHh
Q 003188 609 IMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFS 688 (840)
Q Consensus 609 ~If~GKA~P~y~~aK~iIk~I~~la~~in~d~~~~~~lkVvFl~nYnvslA~~ii~gaDv~l~iS~a~~EAsGTs~MKam 688 (840)
+++.|.+.+... +.+++. +....+ .|.|+...+-+-...++..||+.+.+|+ .|+.|++-+-+|
T Consensus 236 l~i~g~~~~~~~----~~~~~~--------~~~~~~--~v~~~g~~~~~~~~~~~~~ad~~i~~~~--~~~~~~~~~Ea~ 299 (377)
T cd03798 236 LVIVGDGPLREA----LEALAA--------ELGLED--RVTFLGAVPHEEVPAYYAAADVFVLPSL--REGFGLVLLEAM 299 (377)
T ss_pred EEEEcCCcchHH----HHHHHH--------hcCCcc--eEEEeCCCCHHHHHHHHHhcCeeecchh--hccCChHHHHHH
Confidence 999998765322 112222 112444 6888877666666788899999999999 699999999999
Q ss_pred hcCceEeeecCchhHHHH
Q 003188 689 LNGCLIIGTLDGANVEIR 706 (840)
Q Consensus 689 ~NGal~i~tlDGanvEi~ 706 (840)
..|.+.|++-.|+.-|+.
T Consensus 300 ~~G~pvI~~~~~~~~~~~ 317 (377)
T cd03798 300 ACGLPVVATDVGGIPEII 317 (377)
T ss_pred hcCCCEEEecCCChHHHh
Confidence 999999998777764443
No 54
>PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional
Probab=98.47 E-value=3.3e-06 Score=94.71 Aligned_cols=137 Identities=15% Similarity=0.139 Sum_probs=97.5
Q ss_pred HhCCCCCCCCceEeecccchhhhhhhhhhhHHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCC-HHHHHHHHHHHHHH
Q 003188 555 VTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATY-TNAKRIVKLVNDVG 633 (840)
Q Consensus 555 ~~G~~~dp~~l~d~~vkR~heYKRq~Lnll~ii~~y~~ik~~~p~~~~~~~p~~~If~GKA~P~y-~~aK~iIk~I~~la 633 (840)
+.|+ +++...++++.|+..+|+.+. ++..+.++.+ . . .++.+++.|.+.... .......+.+.+++
T Consensus 186 ~~~~--~~~~~~il~~Grl~~~Kg~~~-Li~A~~~l~~--~-~-------p~~~lvivG~g~~~~~~~~~~~~~~l~~~~ 252 (380)
T PRK15484 186 QLNI--SPDETVLLYAGRISPDKGILL-LMQAFEKLAT--A-H-------SNLKLVVVGDPTASSKGEKAAYQKKVLEAA 252 (380)
T ss_pred HhCC--CCCCeEEEEeccCccccCHHH-HHHHHHHHHH--h-C-------CCeEEEEEeCCccccccchhHHHHHHHHHH
Confidence 3454 356678899999999999999 8888877653 2 2 247899988764321 11112333455555
Q ss_pred hhhcCCcCCCCcceEEEEcCCCHHHHhhhccCccccccCCCCCc-cCCCcchhHHhhcCceEeeecCchhHHHHHHhcCc
Q 003188 634 EVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGM-EASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEE 712 (840)
Q Consensus 634 ~~in~d~~~~~~lkVvFl~nYnvslA~~ii~gaDv~l~iS~a~~-EAsGTs~MKam~NGal~i~tlDGanvEi~~~vG~~ 712 (840)
+. .+. +|.|+..-.-+-...++++||+...||+ + |+.|+.-+=||..|.+.|+|--|...|+++. +.
T Consensus 253 ~~------l~~--~v~~~G~~~~~~l~~~~~~aDv~v~pS~--~~E~f~~~~lEAma~G~PVI~s~~gg~~Eiv~~--~~ 320 (380)
T PRK15484 253 KR------IGD--RCIMLGGQPPEKMHNYYPLADLVVVPSQ--VEEAFCMVAVEAMAAGKPVLASTKGGITEFVLE--GI 320 (380)
T ss_pred Hh------cCC--cEEEeCCCCHHHHHHHHHhCCEEEeCCC--CccccccHHHHHHHcCCCEEEeCCCCcHhhccc--CC
Confidence 43 233 6888876665566778999999999997 5 9999999999999999999988887776644 34
Q ss_pred ceEe
Q 003188 713 NFFL 716 (840)
Q Consensus 713 N~~~ 716 (840)
|+|+
T Consensus 321 ~G~~ 324 (380)
T PRK15484 321 TGYH 324 (380)
T ss_pred ceEE
Confidence 5553
No 55
>cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases. capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1).
Probab=98.41 E-value=3.4e-06 Score=91.12 Aligned_cols=119 Identities=13% Similarity=0.045 Sum_probs=88.0
Q ss_pred CCCCceEeecccchhhhhhhhhhhHHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCc
Q 003188 561 DPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDP 640 (840)
Q Consensus 561 dp~~l~d~~vkR~heYKRq~Lnll~ii~~y~~ik~~~p~~~~~~~p~~~If~GKA~P~y~~aK~iIk~I~~la~~in~d~ 640 (840)
.++.+.++++.|+..+|+.++ ++..+..+.+- . .++++++.|.+.... .+...++..
T Consensus 189 ~~~~~~i~~vGr~~~~Kg~~~-li~a~~~l~~~---~-------~~~~l~ivG~g~~~~--------~~~~~~~~~---- 245 (358)
T cd03812 189 LEDKFVIGHVGRFSEQKNHEF-LIEIFAELLKK---N-------PNAKLLLVGDGELEE--------EIKKKVKEL---- 245 (358)
T ss_pred CCCCEEEEEEeccccccChHH-HHHHHHHHHHh---C-------CCeEEEEEeCCchHH--------HHHHHHHhc----
Confidence 467789999999999999999 88888777541 1 257999999765321 123333221
Q ss_pred CCCCcceEEEEcCCCHHHHhhhccCccccccCCCCCccCCCcchhHHhhcCceEeeecCchhHHHHHH
Q 003188 641 EVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQE 708 (840)
Q Consensus 641 ~~~~~lkVvFl~nYnvslA~~ii~gaDv~l~iS~a~~EAsGTs~MKam~NGal~i~tlDGanvEi~~~ 708 (840)
...+ +|.|+.- ...+ ..++..||+..+||+ .|.+|++-|-||..|.+.|+|-.|..-|+.+.
T Consensus 246 ~~~~--~v~~~g~-~~~~-~~~~~~adi~v~ps~--~E~~~~~~lEAma~G~PvI~s~~~~~~~~i~~ 307 (358)
T cd03812 246 GLED--KVIFLGV-RNDV-PELLQAMDVFLFPSL--YEGLPLVLIEAQASGLPCILSDTITKEVDLTD 307 (358)
T ss_pred CCCC--cEEEecc-cCCH-HHHHHhcCEEEeccc--ccCCCHHHHHHHHhCCCEEEEcCCchhhhhcc
Confidence 2445 5666654 3344 457899999999999 89999999999999999999987877555544
No 56
>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases. The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik.
Probab=98.31 E-value=5.1e-05 Score=86.31 Aligned_cols=135 Identities=14% Similarity=0.126 Sum_probs=90.2
Q ss_pred CCCceEeecccchhhhhhhhhhhHHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcC
Q 003188 562 PNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPE 641 (840)
Q Consensus 562 p~~l~d~~vkR~heYKRq~Lnll~ii~~y~~ik~~~p~~~~~~~p~~~If~GKA~P~y~~aK~iIk~I~~la~~in~d~~ 641 (840)
++..+.+.+.|+...|+.+. ++.++..+.+... ... ....+.++++|.+. . -.++.+++.+..
T Consensus 230 ~~~~vi~~~grl~~~K~~~~-li~A~~~l~~~~~-~~~---~~~~i~l~ivG~G~-~---~~~l~~~~~~~~-------- 292 (415)
T cd03816 230 ERPALLVSSTSWTPDEDFGI-LLDALVAYEKSAA-TGP---KLPKLLCIITGKGP-L---KEKYLERIKELK-------- 292 (415)
T ss_pred CCceEEEEeccccCCCCHHH-HHHHHHHHHHhhc-ccc---cCCCEEEEEEecCc-c---HHHHHHHHHHcC--------
Confidence 34467778899999999998 9998888765211 000 01138999999874 1 122233333221
Q ss_pred CCCcceEEEEcCC-CHHHHhhhccCccccccCCCCC-ccCCCcchhHHhhcCceEeeecCchhHHHHHHhcCcceEeec
Q 003188 642 VNSYLKVVFVPNY-NVSVAELLIPGSELSQHISTAG-MEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFG 718 (840)
Q Consensus 642 ~~~~lkVvFl~nY-nvslA~~ii~gaDv~l~iS~a~-~EAsGTs~MKam~NGal~i~tlDGanvEi~~~vG~~N~~~fG 718 (840)
+. .++|+.+| .-+-...++.+||++..++... .|.-|+.-+=+|.-|.+.|+|--|..-|+++. ++|+++++
T Consensus 293 l~---~~~~~~g~~~~~~~~~~l~~aDv~v~~~~~~~~~~~p~~~~Eama~G~PVI~s~~~~~~eiv~~--~~~G~lv~ 366 (415)
T cd03816 293 LK---KVTIRTPWLSAEDYPKLLASADLGVSLHTSSSGLDLPMKVVDMFGCGLPVCALDFKCIDELVKH--GENGLVFG 366 (415)
T ss_pred CC---cEEEEcCcCCHHHHHHHHHhCCEEEEccccccccCCcHHHHHHHHcCCCEEEeCCCCHHHHhcC--CCCEEEEC
Confidence 33 48888775 5555667999999997543311 25566678889999999999988887777765 46788874
No 57
>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases. cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides.
Probab=98.29 E-value=5.8e-06 Score=87.02 Aligned_cols=118 Identities=14% Similarity=0.027 Sum_probs=87.7
Q ss_pred CCCCceEeecccchhhhhhhhhhhHHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCc
Q 003188 561 DPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDP 640 (840)
Q Consensus 561 dp~~l~d~~vkR~heYKRq~Lnll~ii~~y~~ik~~~p~~~~~~~p~~~If~GKA~P~y~~aK~iIk~I~~la~~in~d~ 640 (840)
.++.+..+++.|+..+|+.++ ++..+..+.+ . + .+.+|++.|.+.+.+...+. ++...
T Consensus 185 ~~~~~~i~~~G~~~~~k~~~~-li~~~~~l~~--~-~-------~~~~l~i~G~~~~~~~~~~~---~~~~~-------- 242 (359)
T cd03808 185 PEDDPVFLFVARLLKDKGIDE-LLEAARILKA--K-G-------PNVRLLLVGDGDEENPAAIL---EIEKL-------- 242 (359)
T ss_pred CCCCcEEEEEeccccccCHHH-HHHHHHHHHh--c-C-------CCeEEEEEcCCCcchhhHHH---HHHhc--------
Confidence 356789999999999999999 8888776644 1 1 26899999999887776432 11111
Q ss_pred CCCCcceEEEEcCCCHHHHhhhccCccccccCCCCCccCCCcchhHHhhcCceEeeecCchhHHHH
Q 003188 641 EVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIR 706 (840)
Q Consensus 641 ~~~~~lkVvFl~nYnvslA~~ii~gaDv~l~iS~a~~EAsGTs~MKam~NGal~i~tlDGanvEi~ 706 (840)
...+ +|.|+.. .+-...++..||+...+|+ .|.+|++-+-+|..|.+.|+|-.|..-|++
T Consensus 243 ~~~~--~v~~~g~--~~~~~~~~~~adi~i~ps~--~e~~~~~~~Ea~~~G~Pvi~s~~~~~~~~i 302 (359)
T cd03808 243 GLEG--RVEFLGF--RDDVPELLAAADVFVLPSY--REGLPRVLLEAMAMGRPVIATDVPGCREAV 302 (359)
T ss_pred CCcc--eEEEeec--cccHHHHHHhccEEEecCc--ccCcchHHHHHHHcCCCEEEecCCCchhhh
Confidence 1233 6777665 3445568899999999999 699999999999999999988666554444
No 58
>PLN02949 transferase, transferring glycosyl groups
Probab=98.11 E-value=3.9e-05 Score=89.00 Aligned_cols=120 Identities=16% Similarity=0.130 Sum_probs=86.1
Q ss_pred CCceEeecccchhhhhhhhhhhHHHHHHHHHhhcCccccCCCCCeEEEEEecCC-cCCHHHHHHHHHHHHHHhhhcCCcC
Q 003188 563 NSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAF-ATYTNAKRIVKLVNDVGEVVNTDPE 641 (840)
Q Consensus 563 ~~l~d~~vkR~heYKRq~Lnll~ii~~y~~ik~~~p~~~~~~~p~~~If~GKA~-P~y~~aK~iIk~I~~la~~in~d~~ 641 (840)
+.+..+++.||...|+.++ ++..+.++.+-. +. ...+..++++|.+. +.+..- .+.+.++++.. .
T Consensus 267 ~~~~il~vGR~~~~Kg~~l-lI~A~~~l~~~~---~~---~~~~~~LvIvG~~~~~~~~~~---~~eL~~la~~l----~ 332 (463)
T PLN02949 267 DPPYIISVAQFRPEKAHAL-QLEAFALALEKL---DA---DVPRPKLQFVGSCRNKEDEER---LQKLKDRAKEL----G 332 (463)
T ss_pred CCCEEEEEEeeeccCCHHH-HHHHHHHHHHhc---cc---cCCCcEEEEEeCCCCcccHHH---HHHHHHHHHHc----C
Confidence 4467788999999999999 999888776411 10 11246788888763 333321 12233444321 2
Q ss_pred CCCcceEEEEcCCCHHHHhhhccCccccccCCCCCccCCCcchhHHhhcCceEeeecCc
Q 003188 642 VNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDG 700 (840)
Q Consensus 642 ~~~~lkVvFl~nYnvslA~~ii~gaDv~l~iS~a~~EAsGTs~MKam~NGal~i~tlDG 700 (840)
+.+ +|.|+.+-.-+--..++..||+.+.+|. .|.-|..-+=||..|.++|++-.|
T Consensus 333 L~~--~V~f~g~v~~~el~~ll~~a~~~v~~s~--~E~FGivvlEAMA~G~PVIa~~~g 387 (463)
T PLN02949 333 LDG--DVEFHKNVSYRDLVRLLGGAVAGLHSMI--DEHFGISVVEYMAAGAVPIAHNSA 387 (463)
T ss_pred CCC--cEEEeCCCCHHHHHHHHHhCcEEEeCCc--cCCCChHHHHHHHcCCcEEEeCCC
Confidence 566 7999988766666678899999999998 999999999999999999988543
No 59
>cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra
Probab=98.10 E-value=1.1e-05 Score=88.77 Aligned_cols=168 Identities=21% Similarity=0.183 Sum_probs=113.6
Q ss_pred CceEeecccchhhhhhhhhhhHHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcCCC
Q 003188 564 SLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVN 643 (840)
Q Consensus 564 ~l~d~~vkR~heYKRq~Lnll~ii~~y~~ik~~~p~~~~~~~p~~~If~GKA~P~y~~aK~iIk~I~~la~~in~d~~~~ 643 (840)
....+++.|+...|+.+. ++.++.++.+ . +| ...++|.|.+...... -+++ +. ....
T Consensus 204 ~~~i~~vgrl~~~K~~~~-li~a~~~l~~--~-~~-------~~~l~i~G~g~~~~~~----~~~~----~~----~~~~ 260 (372)
T cd04949 204 PHKIITVARLAPEKQLDQ-LIKAFAKVVK--Q-VP-------DATLDIYGYGDEEEKL----KELI----EE----LGLE 260 (372)
T ss_pred CCeEEEEEccCcccCHHH-HHHHHHHHHH--h-CC-------CcEEEEEEeCchHHHH----HHHH----HH----cCCc
Confidence 356789999999999999 8888887764 2 22 4789999987653322 1122 21 1244
Q ss_pred CcceEEEEcCCCHHHHhhhccCccccccCCCCCccCCCcchhHHhhcCceEeeecCc-hhHHHHHHhcCcceEeecCccc
Q 003188 644 SYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDG-ANVEIRQEIGEENFFLFGAVAE 722 (840)
Q Consensus 644 ~~lkVvFl~nYnvslA~~ii~gaDv~l~iS~a~~EAsGTs~MKam~NGal~i~tlDG-anvEi~~~vG~~N~~~fG~~~d 722 (840)
+ .|.|. +|.-. ...++..||+.+.||+ .|+.|.+.+-||..|.+.|++--| ..-|+++. ++|+++
T Consensus 261 ~--~v~~~-g~~~~-~~~~~~~ad~~v~~S~--~Eg~~~~~lEAma~G~PvI~~~~~~g~~~~v~~--~~~G~l------ 326 (372)
T cd04949 261 D--YVFLK-GYTRD-LDEVYQKAQLSLLTSQ--SEGFGLSLMEALSHGLPVISYDVNYGPSEIIED--GENGYL------ 326 (372)
T ss_pred c--eEEEc-CCCCC-HHHHHhhhhEEEeccc--ccccChHHHHHHhCCCCEEEecCCCCcHHHccc--CCCceE------
Confidence 4 45555 45544 4567888999999999 899999999999999999987433 22222211 122222
Q ss_pred cchhhhhhccCCCCCCChhHHHHHHHHhcCCCCCCChHHHHHHHhhCCCCCCCccccccCChHHHHHHHHHHHHHhcCHH
Q 003188 723 QVPKLRKEREDGLFKPDPRFEEAKQFIRSGAFGSYDYNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYKDQK 802 (840)
Q Consensus 723 ~V~~~~~~~~y~~~~~~~~l~~v~~~~~~G~f~~~~~~~l~~~L~~~~~~~~~D~~~~~~Df~~y~~~~~~~~~~Y~d~~ 802 (840)
+.+.+.++|.++|. .+..|++
T Consensus 327 -------------------------------v~~~d~~~la~~i~----------------------------~ll~~~~ 347 (372)
T cd04949 327 -------------------------------VPKGDIEALAEAII----------------------------ELLNDPK 347 (372)
T ss_pred -------------------------------eCCCcHHHHHHHHH----------------------------HHHcCHH
Confidence 23334566655543 3356888
Q ss_pred HHHHHHHHHhccCCCCChHHHHHHH
Q 003188 803 KWLKMSILSTAGSGKFSSDRTIAQY 827 (840)
Q Consensus 803 ~W~~~~~~n~a~~g~FSsDrti~eY 827 (840)
.|.++..++.+.+..|||++.++.|
T Consensus 348 ~~~~~~~~a~~~~~~~s~~~~~~~w 372 (372)
T cd04949 348 LLQKFSEAAYENAERYSEENVWEKW 372 (372)
T ss_pred HHHHHHHHHHHHHHHhhHHHHHhcC
Confidence 8999998888777789999988753
No 60
>TIGR02918 accessory Sec system glycosylation protein GtfA. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system.
Probab=98.10 E-value=4.2e-05 Score=89.56 Aligned_cols=122 Identities=18% Similarity=0.116 Sum_probs=88.7
Q ss_pred ceEeecccchhhhhhhhhhhHHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcCCCC
Q 003188 565 LFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNS 644 (840)
Q Consensus 565 l~d~~vkR~heYKRq~Lnll~ii~~y~~ik~~~p~~~~~~~p~~~If~GKA~P~y~~aK~iIk~I~~la~~in~d~~~~~ 644 (840)
..++++.|+.+.|+.+. ++.++.++.+ . . .++++++.|.+.. . . .+.++++.. ...+
T Consensus 320 ~~il~vGrl~~~Kg~~~-li~A~~~l~~--~-~-------p~~~l~i~G~G~~---~-~----~l~~~i~~~----~l~~ 376 (500)
T TIGR02918 320 FSIITASRLAKEKHIDW-LVKAVVKAKK--S-V-------PELTFDIYGEGGE---K-Q----KLQKIINEN----QAQD 376 (500)
T ss_pred eEEEEEeccccccCHHH-HHHHHHHHHh--h-C-------CCeEEEEEECchh---H-H----HHHHHHHHc----CCCC
Confidence 46789999999999999 8888777654 2 2 2578888887642 1 1 233333321 1345
Q ss_pred cceEEEEcCCCHHHHhhhccCccccccCCCCCccCCCcchhHHhhcCceEeeecCc-hhHHHHHHhcCcceEeec
Q 003188 645 YLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDG-ANVEIRQEIGEENFFLFG 718 (840)
Q Consensus 645 ~lkVvFl~nYnvslA~~ii~gaDv~l~iS~a~~EAsGTs~MKam~NGal~i~tlDG-anvEi~~~vG~~N~~~fG 718 (840)
+|.|+. + +.++ .+++.||++..||+ .|+.|++-|=||..|.+.|+|--| ...|+++. ++|||++-
T Consensus 377 --~V~f~G-~-~~~~-~~~~~adv~v~pS~--~Egfgl~~lEAma~G~PVI~~dv~~G~~eiI~~--g~nG~lv~ 442 (500)
T TIGR02918 377 --YIHLKG-H-RNLS-EVYKDYELYLSAST--SEGFGLTLMEAVGSGLGMIGFDVNYGNPTFIED--NKNGYLIP 442 (500)
T ss_pred --eEEEcC-C-CCHH-HHHHhCCEEEEcCc--cccccHHHHHHHHhCCCEEEecCCCCCHHHccC--CCCEEEEe
Confidence 566665 5 3565 46899999999999 999999999999999999998744 66676654 56777774
No 61
>cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria. amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor.
Probab=98.03 E-value=3.3e-05 Score=83.08 Aligned_cols=120 Identities=17% Similarity=0.055 Sum_probs=88.1
Q ss_pred CCCceEeecccchhhhhhhhhhhHHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcC
Q 003188 562 PNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPE 641 (840)
Q Consensus 562 p~~l~d~~vkR~heYKRq~Lnll~ii~~y~~ik~~~p~~~~~~~p~~~If~GKA~P~y~~aK~iIk~I~~la~~in~d~~ 641 (840)
++.+.++++.|+..+|+.++ ++.++.++.+ . + .+.+++|.|.+.+.... ....+.. .
T Consensus 177 ~~~~~i~~~g~~~~~k~~~~-l~~~~~~l~~--~-~-------~~~~l~i~G~~~~~~~~--------~~~~~~~----~ 233 (355)
T cd03799 177 GEPLRILSVGRLVEKKGLDY-LLEALALLKD--R-G-------IDFRLDIVGDGPLRDEL--------EALIAEL----G 233 (355)
T ss_pred CCCeEEEEEeeeccccCHHH-HHHHHHHHhh--c-C-------CCeEEEEEECCccHHHH--------HHHHHHc----C
Confidence 34577889999999999999 9888877644 1 1 26899999987654322 2222221 1
Q ss_pred CCCcceEEEEcCCCHHHHhhhccCccccccCCCCC----ccCCCcchhHHhhcCceEeeecCchhHHHH
Q 003188 642 VNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAG----MEASGTSNMKFSLNGCLIIGTLDGANVEIR 706 (840)
Q Consensus 642 ~~~~lkVvFl~nYnvslA~~ii~gaDv~l~iS~a~----~EAsGTs~MKam~NGal~i~tlDGanvEi~ 706 (840)
.++ +|.|.....-.-...++..||+.+.+|+.+ .|..|++-+-+|..|.+.|++-.|+.-|++
T Consensus 234 ~~~--~v~~~g~~~~~~l~~~~~~adi~l~~s~~~~~~~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~~~i 300 (355)
T cd03799 234 LED--RVTLLGAKSQEEVRELLRAADLFVLPSVTAADGDREGLPVVLMEAMAMGLPVISTDVSGIPELV 300 (355)
T ss_pred CCC--eEEECCcCChHHHHHHHHhCCEEEecceecCCCCccCccHHHHHHHHcCCCEEecCCCCcchhh
Confidence 345 688887776667788889999999999921 199999999999999999988666654444
No 62
>PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B ....
Probab=98.03 E-value=3.3e-05 Score=75.73 Aligned_cols=130 Identities=22% Similarity=0.230 Sum_probs=93.4
Q ss_pred CCCCCceEeecccchhhhhhhhhhhHHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCC
Q 003188 560 IDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTD 639 (840)
Q Consensus 560 ~dp~~l~d~~vkR~heYKRq~Lnll~ii~~y~~ik~~~p~~~~~~~p~~~If~GKA~P~y~~aK~iIk~I~~la~~in~d 639 (840)
...+.+++.++.|+...|+.++ ++.++.++.+-+. ....+++.|....... +...++..
T Consensus 11 ~~~~~~~il~~g~~~~~K~~~~-li~a~~~l~~~~~---------~~~~l~i~G~~~~~~~--------~~~~~~~~--- 69 (172)
T PF00534_consen 11 IPDKKKIILFIGRLDPEKGIDL-LIEAFKKLKEKKN---------PNYKLVIVGDGEYKKE--------LKNLIEKL--- 69 (172)
T ss_dssp T-TTSEEEEEESESSGGGTHHH-HHHHHHHHHHHHH---------TTEEEEEESHCCHHHH--------HHHHHHHT---
T ss_pred CCCCCeEEEEEecCccccCHHH-HHHHHHHHHhhcC---------CCeEEEEEcccccccc--------cccccccc---
Confidence 3467899999999999999999 9999988864211 2689999993333222 23333221
Q ss_pred cCCCCcceEEEEcCCCHHHHhhhccCccccccCCCCCccCCCcchhHHhhcCceEeeecCchhHHHHHHhcCcceEee
Q 003188 640 PEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLF 717 (840)
Q Consensus 640 ~~~~~~lkVvFl~nYnvslA~~ii~gaDv~l~iS~a~~EAsGTs~MKam~NGal~i~tlDGanvEi~~~vG~~N~~~f 717 (840)
.+.+ +|.|+....-.--..++..||+++.+|+ .|..|++-+-+|..|.++|++--|.+-|++... .|+++|
T Consensus 70 -~~~~--~i~~~~~~~~~~l~~~~~~~di~v~~s~--~e~~~~~~~Ea~~~g~pvI~~~~~~~~e~~~~~--~~g~~~ 140 (172)
T PF00534_consen 70 -NLKE--NIIFLGYVPDDELDELYKSSDIFVSPSR--NEGFGLSLLEAMACGCPVIASDIGGNNEIINDG--VNGFLF 140 (172)
T ss_dssp -TCGT--TEEEEESHSHHHHHHHHHHTSEEEE-BS--SBSS-HHHHHHHHTT-EEEEESSTHHHHHSGTT--TSEEEE
T ss_pred -cccc--cccccccccccccccccccceecccccc--ccccccccccccccccceeeccccCCceeeccc--cceEEe
Confidence 1445 6888888775666778888999999999 699999999999999999999888876665442 245544
No 63
>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases. UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol.
Probab=98.02 E-value=5.6e-05 Score=80.47 Aligned_cols=129 Identities=16% Similarity=0.164 Sum_probs=95.2
Q ss_pred CCCCceEeecccchhhhhhhhhhhHHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCc
Q 003188 561 DPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDP 640 (840)
Q Consensus 561 dp~~l~d~~vkR~heYKRq~Lnll~ii~~y~~ik~~~p~~~~~~~p~~~If~GKA~P~y~~aK~iIk~I~~la~~in~d~ 640 (840)
+++.+..+++.|+..+|+.+. ++.++.++.+- . .+.++++.|.+... +. +.+.++..
T Consensus 199 ~~~~~~i~~~G~~~~~k~~~~-l~~~~~~~~~~---~-------~~~~l~i~G~~~~~----~~----~~~~~~~~---- 255 (374)
T cd03817 199 PEDEPVLLYVGRLAKEKNIDF-LIRAFARLLKE---E-------PDVKLVIVGDGPER----EE----LEELAREL---- 255 (374)
T ss_pred CCCCeEEEEEeeeecccCHHH-HHHHHHHHHHh---C-------CCeEEEEEeCCchH----HH----HHHHHHHc----
Confidence 456688899999999999998 88877765431 1 25899999976421 22 22222221
Q ss_pred CCCCcceEEEEcCCCHHHHhhhccCccccccCCCCCccCCCcchhHHhhcCceEeeecCchhHHHHHHhcCcceEeec
Q 003188 641 EVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFG 718 (840)
Q Consensus 641 ~~~~~lkVvFl~nYnvslA~~ii~gaDv~l~iS~a~~EAsGTs~MKam~NGal~i~tlDGanvEi~~~vG~~N~~~fG 718 (840)
...+ +|.|+....-+-...++..||+.+++|+ .|..|++-+-+|..|.+.|+|-.|+.-|+.+. +++++++.
T Consensus 256 ~~~~--~v~~~g~~~~~~~~~~~~~ad~~l~~s~--~e~~~~~~~Ea~~~g~PvI~~~~~~~~~~i~~--~~~g~~~~ 327 (374)
T cd03817 256 GLAD--RVIFTGFVPREELPDYYKAADLFVFAST--TETQGLVLLEAMAAGLPVVAVDAPGLPDLVAD--GENGFLFP 327 (374)
T ss_pred CCCC--cEEEeccCChHHHHHHHHHcCEEEeccc--ccCcChHHHHHHHcCCcEEEeCCCChhhheec--CceeEEeC
Confidence 1344 7889888777777888999999999998 89999999999999999999988887655543 24555553
No 64
>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases. AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran.
Probab=98.01 E-value=4.5e-05 Score=79.94 Aligned_cols=111 Identities=14% Similarity=0.031 Sum_probs=79.5
Q ss_pred CCCceEeecccchhhhhhhhhhhHHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcC
Q 003188 562 PNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPE 641 (840)
Q Consensus 562 p~~l~d~~vkR~heYKRq~Lnll~ii~~y~~ik~~~p~~~~~~~p~~~If~GKA~P~y~~aK~iIk~I~~la~~in~d~~ 641 (840)
.+....+++.|+...|+.+. ++..+..+.+ . . .+.++++.|.+..... +....+.. .
T Consensus 176 ~~~~~i~~~g~~~~~K~~~~-l~~~~~~l~~--~-~-------~~~~l~i~G~~~~~~~--------~~~~~~~~----~ 232 (348)
T cd03820 176 LKSKRILAVGRLVPQKGFDL-LIEAWAKIAK--K-H-------PDWKLRIVGDGPEREA--------LEALIKEL----G 232 (348)
T ss_pred CCCcEEEEEEeeccccCHHH-HHHHHHHHHh--c-C-------CCeEEEEEeCCCCHHH--------HHHHHHHc----C
Confidence 34567889999999999999 8888777654 1 1 2578999997654322 22222221 1
Q ss_pred CCCcceEEEEcCCCHHHHhhhccCccccccCCCCCccCCCcchhHHhhcCceEeeecCch
Q 003188 642 VNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGA 701 (840)
Q Consensus 642 ~~~~lkVvFl~nYnvslA~~ii~gaDv~l~iS~a~~EAsGTs~MKam~NGal~i~tlDGa 701 (840)
..+ +|.|... .+-...++..||+...+|+ .|..|++-+-+|..|.+.|++-.|.
T Consensus 233 ~~~--~v~~~g~--~~~~~~~~~~ad~~i~ps~--~e~~~~~~~Ea~a~G~Pvi~~~~~~ 286 (348)
T cd03820 233 LED--RVILLGF--TKNIEEYYAKASIFVLTSR--FEGFPMVLLEAMAFGLPVISFDCPT 286 (348)
T ss_pred CCC--eEEEcCC--cchHHHHHHhCCEEEeCcc--ccccCHHHHHHHHcCCCEEEecCCC
Confidence 334 5555554 4455678889999999999 7999999999999999999874333
No 65
>cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=97.97 E-value=1.5e-05 Score=79.37 Aligned_cols=120 Identities=18% Similarity=0.125 Sum_probs=93.4
Q ss_pred ecccchhhhhhhhhhhHHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcCCCCcceE
Q 003188 569 QVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYLKV 648 (840)
Q Consensus 569 ~vkR~heYKRq~Lnll~ii~~y~~ik~~~p~~~~~~~p~~~If~GKA~P~y~~aK~iIk~I~~la~~in~d~~~~~~lkV 648 (840)
++.|+..+|+.++ ++..+.+..+- . ...+++|.|+..+.+...+. +... ...+ +|
T Consensus 109 ~~g~~~~~k~~~~-~~~a~~~l~~~---~-------~~~~~~i~G~~~~~~~~~~~----~~~~--------~~~~--~v 163 (229)
T cd01635 109 FVGRLAPEKGLDD-LIEAFALLKER---G-------PDLKLVIAGDGPEREYLEEL----LAAL--------LLLD--RV 163 (229)
T ss_pred EEEeecccCCHHH-HHHHHHHHHHh---C-------CCeEEEEEeCCCChHHHHHH----HHhc--------CCcc--cE
Confidence 8889999999999 88887776541 1 26899999999887765432 1111 2344 78
Q ss_pred EEEcCC-CHHHHhhhccCccccccCCCCCccCCCcchhHHhhcCceEeeecCchhHHHHHHhcCcceEee
Q 003188 649 VFVPNY-NVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLF 717 (840)
Q Consensus 649 vFl~nY-nvslA~~ii~gaDv~l~iS~a~~EAsGTs~MKam~NGal~i~tlDGanvEi~~~vG~~N~~~f 717 (840)
.|+..+ ..+..+.+..+||+.+.+|+ .|++|++-+-||..|.+.|+|-+|++-|+++. ++++|+|
T Consensus 164 ~~~~~~~~~~~~~~~~~~~di~l~~~~--~e~~~~~~~Eam~~g~pvi~s~~~~~~e~i~~--~~~g~~~ 229 (229)
T cd01635 164 IFLGGLDPEELLALLLAAADVFVLPSL--REGFGLVVLEAMACGLPVIATDVGGPPEIVED--GLTGLLV 229 (229)
T ss_pred EEeCCCCcHHHHHHHhhcCCEEEeccc--ccCcChHHHHHHhCCCCEEEcCCCCcceEEEC--CCceEEC
Confidence 888887 67788888888999999999 88999999999999999999999998665333 3556654
No 66
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=97.95 E-value=0.00035 Score=86.22 Aligned_cols=130 Identities=12% Similarity=0.072 Sum_probs=82.1
Q ss_pred CCceEeecccchhhhhhhhhhhHHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCC-HHHHHHHHHHHHHHhhhcCCcC
Q 003188 563 NSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATY-TNAKRIVKLVNDVGEVVNTDPE 641 (840)
Q Consensus 563 ~~l~d~~vkR~heYKRq~Lnll~ii~~y~~ik~~~p~~~~~~~p~~~If~GKA~P~y-~~aK~iIk~I~~la~~in~d~~ 641 (840)
+..+++.|-|++.-|+..+ +|..++++++ . +|+.+ ..+++|..+-..-++ ..-.++-+.+.++...||..-.
T Consensus 278 ~~~lIl~VgRLd~~KGi~~-lL~Afe~lL~--~-~P~~~---~kvvLvqia~psr~~~~~y~~l~~~v~~l~g~In~~~g 350 (797)
T PLN03063 278 GRKVILGVDRLDMIKGIPQ-KYLAFEKFLE--E-NPEWR---DKVMLVQIAVPTRNDVPEYQKLKSQVHELVGRINGRFG 350 (797)
T ss_pred CCeEEEEecccccccCHHH-HHHHHHHHHH--h-Ccccc---CcEEEEEEecCCCCchHHHHHHHHHHHHHHHHhhcccc
Confidence 4568889999999999999 9999888865 3 45431 135555333222111 1113355566666665654211
Q ss_pred CCCcceEEEEcC-CCHHHHhhhccCccccccCCCCCccCCCcchhHHhhcCc-----eEeeecCch
Q 003188 642 VNSYLKVVFVPN-YNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGC-----LIIGTLDGA 701 (840)
Q Consensus 642 ~~~~lkVvFl~n-YnvslA~~ii~gaDv~l~iS~a~~EAsGTs~MKam~NGa-----l~i~tlDGa 701 (840)
..+..-|+++.. ..-+---.++.+||+++.+|+ .|.=|+.-+-||.-|. +.+|-..|+
T Consensus 351 ~~~~~pv~~l~~~v~~~el~aly~~ADvfvvtSl--rEGmnLv~lEamA~g~p~~gvlVlSe~~G~ 414 (797)
T PLN03063 351 SVSSVPIHHLDCSVDFNYLCALYAITDVMLVTSL--RDGMNLVSYEFVACQKAKKGVLVLSEFAGA 414 (797)
T ss_pred cCCCceeEEecCCCCHHHHHHHHHhCCEEEeCcc--ccccCcchhhHheeecCCCCCEEeeCCcCc
Confidence 122334666664 233333468899999999999 8988888888888875 555555554
No 67
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=97.94 E-value=0.00075 Score=82.58 Aligned_cols=128 Identities=12% Similarity=0.166 Sum_probs=86.6
Q ss_pred CCceEeecccchhhhhhhhhhhHHHHHHHHHhhcCccccCCCCCeEEEEEecC----CcCCHHHHHHHHHHHHHHhhhcC
Q 003188 563 NSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKA----FATYTNAKRIVKLVNDVGEVVNT 638 (840)
Q Consensus 563 ~~l~d~~vkR~heYKRq~Lnll~ii~~y~~ik~~~p~~~~~~~p~~~If~GKA----~P~y~~aK~iIk~I~~la~~in~ 638 (840)
+..+++.|-|++..|+..+ +|..+.++++ . +|+.+ ..+++|+.|-+ -|.|. ++-+.+.+++..||.
T Consensus 264 ~~~~il~VgRl~~~Kgi~~-~l~A~~~ll~--~-~p~~~---~~v~lv~v~~~sr~~~~~~~---~l~~~~~~~v~~in~ 333 (726)
T PRK14501 264 GRKIILSIDRLDYTKGIPR-RLLAFERFLE--K-NPEWR---GKVRLVQVAVPSRTGVPQYQ---EMKREIDELVGRING 333 (726)
T ss_pred CCEEEEEecCcccccCHHH-HHHHHHHHHH--h-Ccccc---CCEEEEEEecCCCcchHHHH---HHHHHHHHHHHHHHh
Confidence 5578999999999999999 9999988865 3 44321 13567666522 24443 445666677666653
Q ss_pred CcCCCCcceEEEEcC-CCHHHHhhhccCccccccCCCCCccCCCcchhHHhhc-----CceEeeecCchh
Q 003188 639 DPEVNSYLKVVFVPN-YNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLN-----GCLIIGTLDGAN 702 (840)
Q Consensus 639 d~~~~~~lkVvFl~n-YnvslA~~ii~gaDv~l~iS~a~~EAsGTs~MKam~N-----Gal~i~tlDGan 702 (840)
--...+...|+++.+ ..-+---.++++||+++.+|. .|.=|+.-+-||.- |.+.+|+.-|+-
T Consensus 334 ~~~~~~~~pv~~~~~~~~~~~l~~ly~~aDv~v~~S~--~EG~~lv~~Eama~~~~~~g~~vls~~~G~~ 401 (726)
T PRK14501 334 EFGTVDWTPIHYFYRSLPFEELVALYRAADVALVTPL--RDGMNLVAKEYVASRTDGDGVLILSEMAGAA 401 (726)
T ss_pred hcCCCCcceEEEEeCCCCHHHHHHHHHhccEEEeccc--ccccCcccceEEEEcCCCCceEEEecccchh
Confidence 211112223665554 454555568999999999999 89888888888877 668887766664
No 68
>cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=97.93 E-value=7.4e-05 Score=80.77 Aligned_cols=111 Identities=16% Similarity=0.156 Sum_probs=78.1
Q ss_pred ceEeecccchhhhhhhhhhhHHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcCCCC
Q 003188 565 LFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNS 644 (840)
Q Consensus 565 l~d~~vkR~heYKRq~Lnll~ii~~y~~ik~~~p~~~~~~~p~~~If~GKA~P~y~~aK~iIk~I~~la~~in~d~~~~~ 644 (840)
.+.+++.|+.++|+.++ ++..+..+.+ ..++++.|.+.......+ .+.+.. ...+
T Consensus 194 ~~i~~~G~~~~~Kg~~~-li~a~~~l~~-------------~~~l~ivG~~~~~~~~~~----~~~~~~-------~~~~ 248 (363)
T cd04955 194 RYYLLVGRIVPENNIDD-LIEAFSKSNS-------------GKKLVIVGNADHNTPYGK----LLKEKA-------AADP 248 (363)
T ss_pred cEEEEEecccccCCHHH-HHHHHHhhcc-------------CceEEEEcCCCCcchHHH----HHHHHh-------CCCC
Confidence 45679999999999998 7776544311 468999998854433322 222111 1344
Q ss_pred cceEEEEcCCCHHHHhhhccCccccccCCCCCc-cCCCcchhHHhhcCceEeeecCchhHH
Q 003188 645 YLKVVFVPNYNVSVAELLIPGSELSQHISTAGM-EASGTSNMKFSLNGCLIIGTLDGANVE 704 (840)
Q Consensus 645 ~lkVvFl~nYnvslA~~ii~gaDv~l~iS~a~~-EAsGTs~MKam~NGal~i~tlDGanvE 704 (840)
+|.|+.-..-+-....+..||+...||. . |..|.+-+=||..|.+.|+|-.|...|
T Consensus 249 --~V~~~g~~~~~~~~~~~~~ad~~v~ps~--~~e~~~~~~~EAma~G~PvI~s~~~~~~e 305 (363)
T cd04955 249 --RIIFVGPIYDQELLELLRYAALFYLHGH--SVGGTNPSLLEAMAYGCPVLASDNPFNRE 305 (363)
T ss_pred --cEEEccccChHHHHHHHHhCCEEEeCCc--cCCCCChHHHHHHHcCCCEEEecCCccce
Confidence 6888765444444566678899999998 6 999999999999999999996665533
No 69
>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases. wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase.
Probab=97.89 E-value=0.00016 Score=77.07 Aligned_cols=117 Identities=12% Similarity=0.087 Sum_probs=83.3
Q ss_pred CCCCceEeecccchhhhhhhhhhhHHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCc
Q 003188 561 DPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDP 640 (840)
Q Consensus 561 dp~~l~d~~vkR~heYKRq~Lnll~ii~~y~~ik~~~p~~~~~~~p~~~If~GKA~P~y~~aK~iIk~I~~la~~in~d~ 640 (840)
+++.+..+++.|+..+|+..+ ++..+.++.+. .+.++++.|.+...... .+++ .. .
T Consensus 217 ~~~~~~i~~~G~~~~~k~~~~-l~~~~~~l~~~-----------~~~~l~i~G~~~~~~~~----~~~~---~~-----~ 272 (394)
T cd03794 217 LDDKFVVLYAGNIGRAQGLDT-LLEAAALLKDR-----------PDIRFLIVGDGPEKEEL----KELA---KA-----L 272 (394)
T ss_pred CCCcEEEEEecCcccccCHHH-HHHHHHHHhhc-----------CCeEEEEeCCcccHHHH----HHHH---HH-----c
Confidence 356789999999999999999 88877665431 26789999976543221 1111 11 1
Q ss_pred CCCCcceEEEEcCCCHHHHhhhccCccccccCCCCCccCC-Ccc----hhHHhhcCceEeeecCchhHHHH
Q 003188 641 EVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEAS-GTS----NMKFSLNGCLIIGTLDGANVEIR 706 (840)
Q Consensus 641 ~~~~~lkVvFl~nYnvslA~~ii~gaDv~l~iS~a~~EAs-GTs----~MKam~NGal~i~tlDGanvEi~ 706 (840)
.. . +|.|+...+-+-...++..||+...+|. .|.. |.+ -+-||..|.+.|+|-.|+.-|+.
T Consensus 273 ~~-~--~v~~~g~~~~~~~~~~~~~~di~i~~~~--~~~~~~~~~p~~~~Ea~~~G~pvi~~~~~~~~~~~ 338 (394)
T cd03794 273 GL-D--NVTFLGRVPKEELPELLAAADVGLVPLK--PGPAFEGVSPSKLFEYMAAGKPVLASVDGESAELV 338 (394)
T ss_pred CC-C--cEEEeCCCChHHHHHHHHhhCeeEEecc--CcccccccCchHHHHHHHCCCcEEEecCCCchhhh
Confidence 12 2 5899987776777788899999999999 6654 333 48899999999999777654433
No 70
>PRK10125 putative glycosyl transferase; Provisional
Probab=97.86 E-value=0.00057 Score=77.96 Aligned_cols=113 Identities=13% Similarity=-0.051 Sum_probs=74.0
Q ss_pred CCCceEeecccchhh--hhhhhhhhHHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCC
Q 003188 562 PNSLFDIQVKRIHEY--KRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTD 639 (840)
Q Consensus 562 p~~l~d~~vkR~heY--KRq~Lnll~ii~~y~~ik~~~p~~~~~~~p~~~If~GKA~P~y~~aK~iIk~I~~la~~in~d 639 (840)
++.+.++++-|+..+ |+.+. ++..+.+ +. .+.++++.|++.|...
T Consensus 239 ~~~~~il~v~~~~~~~~Kg~~~-li~A~~~---l~----------~~~~L~ivG~g~~~~~------------------- 285 (405)
T PRK10125 239 QGKPKIAVVAHDLRYDGKTDQQ-LVREMMA---LG----------DKIELHTFGKFSPFTA------------------- 285 (405)
T ss_pred CCCCEEEEEEeccccCCccHHH-HHHHHHh---CC----------CCeEEEEEcCCCcccc-------------------
Confidence 455667777775445 44455 5444433 21 1468888898755321
Q ss_pred cCCCCcceEEEEcC-CCHHHHhhhccCccccccCCCCCccCCCcchhHHhhcCceEeeecCchhHHHHHHhcCcceEeec
Q 003188 640 PEVNSYLKVVFVPN-YNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFG 718 (840)
Q Consensus 640 ~~~~~~lkVvFl~n-YnvslA~~ii~gaDv~l~iS~a~~EAsGTs~MKam~NGal~i~tlDGanvEi~~~vG~~N~~~fG 718 (840)
. +|.++.- .+..--..++++||++..||+ .|.-|+.-+=||.-|++.|+|--|..-|+++ ++|++++-
T Consensus 286 ----~--~v~~~g~~~~~~~l~~~y~~aDvfV~pS~--~Egfp~vilEAmA~G~PVVat~~gG~~Eiv~---~~~G~lv~ 354 (405)
T PRK10125 286 ----G--NVVNHGFETDKRKLMSALNQMDALVFSSR--VDNYPLILCEALSIGVPVIATHSDAAREVLQ---KSGGKTVS 354 (405)
T ss_pred ----c--ceEEecCcCCHHHHHHHHHhCCEEEECCc--cccCcCHHHHHHHcCCCEEEeCCCChHHhEe---CCcEEEEC
Confidence 1 2333221 133333457899999999999 9999999999999999999997777666543 23666663
No 71
>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=97.85 E-value=0.00023 Score=76.01 Aligned_cols=169 Identities=16% Similarity=0.150 Sum_probs=116.6
Q ss_pred CCCceEeecccchhhhhhhhhhhHHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcC
Q 003188 562 PNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPE 641 (840)
Q Consensus 562 p~~l~d~~vkR~heYKRq~Lnll~ii~~y~~ik~~~p~~~~~~~p~~~If~GKA~P~y~~aK~iIk~I~~la~~in~d~~ 641 (840)
++.+..+++.|+...|+... ++.++..+... .+..+++.|.+.-. .. ++ .
T Consensus 195 ~~~~~i~~~G~~~~~k~~~~-~i~~~~~l~~~-----------~~~~l~i~G~~~~~-~~----~~------~------- 244 (364)
T cd03814 195 PDRPVLLYVGRLAPEKNLEA-LLDADLPLRRR-----------PPVRLVIVGDGPAR-AR----LE------A------- 244 (364)
T ss_pred CCCeEEEEEeccccccCHHH-HHHHHHHhhhc-----------CCceEEEEeCCchH-HH----Hh------c-------
Confidence 45678899999999999998 87777665331 25789999964321 11 11 1
Q ss_pred CCCcceEEEEcCCCHHHHhhhccCccccccCCCCCccCCCcchhHHhhcCceEeeecCchhHHHHHHhcCcceEeecCcc
Q 003188 642 VNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAVA 721 (840)
Q Consensus 642 ~~~~lkVvFl~nYnvslA~~ii~gaDv~l~iS~a~~EAsGTs~MKam~NGal~i~tlDGanvEi~~~vG~~N~~~fG~~~ 721 (840)
..+ +|.|+.-...+-...++.+||+.+.+|. .|..|++-+=+|..|.+.|++-.|+.-|+.+. +.++++
T Consensus 245 ~~~--~v~~~g~~~~~~~~~~~~~~d~~l~~s~--~e~~~~~~lEa~a~g~PvI~~~~~~~~~~i~~--~~~g~~----- 313 (364)
T cd03814 245 RYP--NVHFLGFLDGEELAAAYASADVFVFPSR--TETFGLVVLEAMASGLPVVAPDAGGPADIVTD--GENGLL----- 313 (364)
T ss_pred cCC--cEEEEeccCHHHHHHHHHhCCEEEECcc--cccCCcHHHHHHHcCCCEEEcCCCCchhhhcC--CcceEE-----
Confidence 233 6888877677777789999999999998 89999999999999999998866665444322 122222
Q ss_pred ccchhhhhhccCCCCCCChhHHHHHHHHhcCCCCCCChHHHHHHHhhCCCCCCCccccccCChHHHHHHHHHHHHHhcCH
Q 003188 722 EQVPKLRKEREDGLFKPDPRFEEAKQFIRSGAFGSYDYNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYKDQ 801 (840)
Q Consensus 722 d~V~~~~~~~~y~~~~~~~~l~~v~~~~~~G~f~~~~~~~l~~~L~~~~~~~~~D~~~~~~Df~~y~~~~~~~~~~Y~d~ 801 (840)
+.+.+.+++.+.+. ....|+
T Consensus 314 --------------------------------~~~~~~~~l~~~i~----------------------------~l~~~~ 333 (364)
T cd03814 314 --------------------------------VEPGDAEAFAAALA----------------------------ALLADP 333 (364)
T ss_pred --------------------------------cCCCCHHHHHHHHH----------------------------HHHcCH
Confidence 22333444444332 334577
Q ss_pred HHHHHHHHHHhccCCCCChHHHHHHHHHHH
Q 003188 802 KKWLKMSILSTAGSGKFSSDRTIAQYAKEI 831 (840)
Q Consensus 802 ~~W~~~~~~n~a~~g~FSsDrti~eYa~~i 831 (840)
+.+.++...+....-.|||++.+++|.+-+
T Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (364)
T cd03814 334 ELRRRMAARARAEAERRSWEAFLDNLLEAY 363 (364)
T ss_pred HHHHHHHHHHHHHHhhcCHHHHHHHHHHhh
Confidence 777777766655445799999999987643
No 72
>PHA01630 putative group 1 glycosyl transferase
Probab=97.84 E-value=0.00011 Score=81.64 Aligned_cols=118 Identities=11% Similarity=-0.006 Sum_probs=82.8
Q ss_pred CceEeecccchhhhhhhhhhhHHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcCCC
Q 003188 564 SLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVN 643 (840)
Q Consensus 564 ~l~d~~vkR~heYKRq~Lnll~ii~~y~~ik~~~p~~~~~~~p~~~If~GKA~P~y~~aK~iIk~I~~la~~in~d~~~~ 643 (840)
.++.++++|++++|+.++ ++..+.++.+ . . .+..+++.|.+ + ... ++ .. +.
T Consensus 142 ~~vl~~~g~~~~~Kg~d~-Li~A~~~l~~--~-~-------~~~~llivG~~-~--~~~----~l----~~-------~~ 192 (331)
T PHA01630 142 PCVLAILPHSWDRKGGDI-VVKIFHELQN--E-G-------YDFYFLIKSSN-M--LDP----RL----FG-------LN 192 (331)
T ss_pred CEEEEEeccccccCCHHH-HHHHHHHHHh--h-C-------CCEEEEEEeCc-c--cch----hh----cc-------cc
Confidence 356778999999999999 8888776643 1 1 25788888832 1 110 00 00 22
Q ss_pred CcceEEEEcCCCHHHHhhhccCccccccCCCCCccCCCcchhHHhhcCceEeeecCchhHHHHHHhcCcceEeecC
Q 003188 644 SYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGA 719 (840)
Q Consensus 644 ~~lkVvFl~nYnvslA~~ii~gaDv~l~iS~a~~EAsGTs~MKam~NGal~i~tlDGanvEi~~~vG~~N~~~fG~ 719 (840)
+ ...++ .-+--..++++||++..||+ .|+-|+.-+=||..|.+.|+|-.|.+-|++.. ++|+|++..
T Consensus 193 ~--~~~~v---~~~~l~~~y~~aDv~v~pS~--~E~fgl~~lEAMA~G~PVIas~~gg~~E~i~~--~~ng~lv~~ 259 (331)
T PHA01630 193 G--VKTPL---PDDDIYSLFAGCDILFYPVR--GGAFEIPVIEALALGLDVVVTEKGAWSEWVLS--NLDVYWIKS 259 (331)
T ss_pred c--eeccC---CHHHHHHHHHhCCEEEECCc--cccCChHHHHHHHcCCCEEEeCCCCchhhccC--CCceEEeee
Confidence 2 11112 22344567899999999999 79999999999999999999999988776643 478887743
No 73
>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases. ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II).
Probab=97.76 E-value=0.00078 Score=71.64 Aligned_cols=114 Identities=15% Similarity=0.061 Sum_probs=86.8
Q ss_pred CCCceEeecccchhhhhhhhhhhHHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcC
Q 003188 562 PNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPE 641 (840)
Q Consensus 562 p~~l~d~~vkR~heYKRq~Lnll~ii~~y~~ik~~~p~~~~~~~p~~~If~GKA~P~y~~aK~iIk~I~~la~~in~d~~ 641 (840)
.+.+..+++.|+..+|+.++ ++..+..+.+ . .+.+++.|.+.+.+..-+.. .
T Consensus 189 ~~~~~i~~~G~~~~~k~~~~-li~~~~~l~~--~----------~~~l~i~G~~~~~~~~~~~~-------~-------- 240 (359)
T cd03823 189 GGRLRFGFIGQLTPHKGVDL-LLEAFKRLPR--G----------DIELVIVGNGLELEEESYEL-------E-------- 240 (359)
T ss_pred CCceEEEEEecCccccCHHH-HHHHHHHHHh--c----------CcEEEEEcCchhhhHHHHhh-------c--------
Confidence 35577889999999999998 8887766543 1 57899999887766542211 1
Q ss_pred CCCcceEEEEcCCCHHHHhhhccCccccccCCCCCccCCCcchhHHhhcCceEeeecCchhHHHH
Q 003188 642 VNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIR 706 (840)
Q Consensus 642 ~~~~lkVvFl~nYnvslA~~ii~gaDv~l~iS~a~~EAsGTs~MKam~NGal~i~tlDGanvEi~ 706 (840)
..+ +|.|+..+.-+....++..||+..+||+ ..|.+|++-+-+|..|.+.|+|--|..-|+.
T Consensus 241 ~~~--~v~~~g~~~~~~~~~~~~~ad~~i~ps~-~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~e~i 302 (359)
T cd03823 241 GDP--RVEFLGAYPQEEIDDFYAEIDVLVVPSI-WPENFPLVIREALAAGVPVIASDIGGMAELV 302 (359)
T ss_pred CCC--eEEEeCCCCHHHHHHHHHhCCEEEEcCc-ccCCCChHHHHHHHCCCCEEECCCCCHHHHh
Confidence 234 6888888877777889999999999986 2489999999999999999988666554443
No 74
>cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases. aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue.
Probab=97.73 E-value=0.00023 Score=76.18 Aligned_cols=123 Identities=13% Similarity=0.056 Sum_probs=85.5
Q ss_pred CceEeecccchhhhhhhhhhhHHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcCCC
Q 003188 564 SLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVN 643 (840)
Q Consensus 564 ~l~d~~vkR~heYKRq~Lnll~ii~~y~~ik~~~p~~~~~~~p~~~If~GKA~P~y~~aK~iIk~I~~la~~in~d~~~~ 643 (840)
....+++.|+...|++++ ++.... . ....+++.|.+....... ..+.+.. ...
T Consensus 171 ~~~i~~~Gr~~~~Kg~~~-li~~~~------~---------~~~~l~i~G~~~~~~~~~-------~~~~~~~----~~~ 223 (335)
T cd03802 171 GDYLLFLGRISPEKGPHL-AIRAAR------R---------AGIPLKLAGPVSDPDYFY-------REIAPEL----LDG 223 (335)
T ss_pred CCEEEEEEeeccccCHHH-HHHHHH------h---------cCCeEEEEeCCCCHHHHH-------HHHHHhc----ccC
Confidence 346789999999999998 665421 1 146799999886443322 1122110 034
Q ss_pred CcceEEEEcCCCHHHHhhhccCccccccCCCCCccCCCcchhHHhhcCceEeeecCchhHHHHHHhcCcceEeec
Q 003188 644 SYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFG 718 (840)
Q Consensus 644 ~~lkVvFl~nYnvslA~~ii~gaDv~l~iS~a~~EAsGTs~MKam~NGal~i~tlDGanvEi~~~vG~~N~~~fG 718 (840)
+ +|.|+..-+-.-...+++++|+.+++|+ ..|.+|++-+=||..|.+.|+|--|..-|+++. +.|++++.
T Consensus 224 ~--~v~~~G~~~~~~~~~~~~~~d~~v~ps~-~~E~~~~~~lEAma~G~PvI~~~~~~~~e~i~~--~~~g~l~~ 293 (335)
T cd03802 224 P--DIEYLGEVGGAEKAELLGNARALLFPIL-WEEPFGLVMIEAMACGTPVIAFRRGAVPEVVED--GVTGFLVD 293 (335)
T ss_pred C--cEEEeCCCCHHHHHHHHHhCcEEEeCCc-ccCCcchHHHHHHhcCCCEEEeCCCCchhheeC--CCcEEEeC
Confidence 4 7888877655555678899999999997 249999999999999999999977777655542 23565553
No 75
>cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases. ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides.
Probab=97.68 E-value=0.00033 Score=80.00 Aligned_cols=139 Identities=17% Similarity=0.150 Sum_probs=96.0
Q ss_pred CCceEeecccchhhhhhhhhhhHHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcCC
Q 003188 563 NSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEV 642 (840)
Q Consensus 563 ~~l~d~~vkR~heYKRq~Lnll~ii~~y~~ik~~~p~~~~~~~p~~~If~GKA~P~y~~aK~iIk~I~~la~~in~d~~~ 642 (840)
+...++++.||...|+..+ ++..+..+.+- .|.. ...+.+++++|.+...+.. ...+.+.++++.. .+
T Consensus 236 ~~~~il~vgr~~~~K~~~~-li~A~~~l~~~---~~~~--~~~~~~lvivG~~~~~~~~--~~~~~L~~~~~~l----~l 303 (419)
T cd03806 236 RENQILSIAQFRPEKNHPL-QLRAFAKLLKR---LPEE--IKEKIKLVLIGSCRNEDDE--KRVEDLKLLAKEL----GL 303 (419)
T ss_pred CCcEEEEEEeecCCCCHHH-HHHHHHHHHHh---Cccc--ccCceEEEEEcCCCCcccH--HHHHHHHHHHHHh----CC
Confidence 4578899999999999999 99888877652 2210 0124788888876544321 1122344444432 25
Q ss_pred CCcceEEEEcCCCHHHHhhhccCccccccCCCCCccCCCcchhHHhhcCceEeeecCch-hHHHHHHh-cCcceEee
Q 003188 643 NSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGA-NVEIRQEI-GEENFFLF 717 (840)
Q Consensus 643 ~~~lkVvFl~nYnvslA~~ii~gaDv~l~iS~a~~EAsGTs~MKam~NGal~i~tlDGa-nvEi~~~v-G~~N~~~f 717 (840)
.+ +|.|+.+-.-+--..++..||+.+.+|. .|.-|.+-.=||..|.++|++-.|. .-||++.. .++++|++
T Consensus 304 ~~--~V~f~g~v~~~~l~~~l~~adv~v~~s~--~E~Fgi~~lEAMa~G~pvIa~~~ggp~~~iv~~~~~g~~G~l~ 376 (419)
T cd03806 304 ED--KVEFVVNAPFEELLEELSTASIGLHTMW--NEHFGIGVVEYMAAGLIPLAHASGGPLLDIVVPWDGGPTGFLA 376 (419)
T ss_pred CC--eEEEecCCCHHHHHHHHHhCeEEEECCc--cCCcccHHHHHHHcCCcEEEEcCCCCchheeeccCCCCceEEe
Confidence 66 8999988666666788999999999999 7999999999999999999886543 33444311 23455554
No 76
>cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases. AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea.
Probab=97.61 E-value=0.00097 Score=75.75 Aligned_cols=128 Identities=21% Similarity=0.153 Sum_probs=85.8
Q ss_pred CCceEeecccchhhhhhhhhhhHHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcCC
Q 003188 563 NSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEV 642 (840)
Q Consensus 563 ~~l~d~~vkR~heYKRq~Lnll~ii~~y~~ik~~~p~~~~~~~p~~~If~GKA~P~y~~aK~iIk~I~~la~~in~d~~~ 642 (840)
+.+..+.+.|+...||.++ ++..+.++.+ . .|+ ....+++.|.+... . . +.+.++.. ..
T Consensus 229 ~~~~il~~Grl~~~Kg~~~-li~a~~~l~~--~-~p~-----~~l~~~iiG~g~~~-~---~----l~~~~~~~----~~ 287 (407)
T cd04946 229 DTLRIVSCSYLVPVKRVDL-IIKALAALAK--A-RPS-----IKIKWTHIGGGPLE-D---T----LKELAESK----PE 287 (407)
T ss_pred CCEEEEEeeccccccCHHH-HHHHHHHHHH--h-CCC-----ceEEEEEEeCchHH-H---H----HHHHHHhc----CC
Confidence 3467889999999999998 8888877755 2 222 24667777876421 1 1 23333211 12
Q ss_pred CCcceEEEEcCCC-HHHHhhhc-cCccccccCCCCCccCCCcchhHHhhcCceEeeecCchhHHHHHHhcCcceEee
Q 003188 643 NSYLKVVFVPNYN-VSVAELLI-PGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLF 717 (840)
Q Consensus 643 ~~~lkVvFl~nYn-vslA~~ii-~gaDv~l~iS~a~~EAsGTs~MKam~NGal~i~tlDGanvEi~~~vG~~N~~~f 717 (840)
.+ +|.|+.-.. .++.+.+- ..||++.++|. .|.-|++=|-||..|.+.|+|-.|...|+++. ++|++++
T Consensus 288 ~~--~V~f~G~v~~~e~~~~~~~~~~~v~v~~S~--~Eg~p~~llEAma~G~PVIas~vgg~~e~i~~--~~~G~l~ 358 (407)
T cd04946 288 NI--SVNFTGELSNSEVYKLYKENPVDVFVNLSE--SEGLPVSIMEAMSFGIPVIATNVGGTPEIVDN--GGNGLLL 358 (407)
T ss_pred Cc--eEEEecCCChHHHHHHHhhcCCCEEEeCCc--cccccHHHHHHHHcCCCEEeCCCCCcHHHhcC--CCcEEEe
Confidence 34 677765443 34444443 35899999998 99999999999999999999977777665543 2355544
No 77
>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases. WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core.
Probab=97.53 E-value=0.00027 Score=74.06 Aligned_cols=127 Identities=18% Similarity=0.118 Sum_probs=90.8
Q ss_pred CCCCceEeecccchhhhhhhhhhhHHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCc
Q 003188 561 DPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDP 640 (840)
Q Consensus 561 dp~~l~d~~vkR~heYKRq~Lnll~ii~~y~~ik~~~p~~~~~~~p~~~If~GKA~P~y~~aK~iIk~I~~la~~in~d~ 640 (840)
+++.+..+++.|+.+.|+..+ ++..+..+.+- ..++++++.|.+...... .+.+..+.
T Consensus 186 ~~~~~~i~~~g~~~~~k~~~~-~i~~~~~l~~~----------~~~~~l~i~G~~~~~~~~----~~~~~~~~------- 243 (353)
T cd03811 186 PPDGPVILAVGRLSPQKGFDT-LIRAFALLRKE----------GPDARLVILGDGPLREEL----EALAKELG------- 243 (353)
T ss_pred CCCceEEEEEecchhhcChHH-HHHHHHHhhhc----------CCCceEEEEcCCccHHHH----HHHHHhcC-------
Confidence 456788999999999999998 88877766431 126789999976543322 12222221
Q ss_pred CCCCcceEEEEcCCCHHHHhhhccCccccccCCCCCccCCCcchhHHhhcCceEeeecCchhHHHHHHhcCcceEeec
Q 003188 641 EVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFG 718 (840)
Q Consensus 641 ~~~~~lkVvFl~nYnvslA~~ii~gaDv~l~iS~a~~EAsGTs~MKam~NGal~i~tlDGanvEi~~~vG~~N~~~fG 718 (840)
..+ +|.|.... +-...++..||+.+.+|+ .|..|++-+-+|..|.+.|+|-.|+.-|+++. +.+++++.
T Consensus 244 -~~~--~v~~~g~~--~~~~~~~~~~d~~i~ps~--~e~~~~~~~Ea~~~G~PvI~~~~~~~~e~i~~--~~~g~~~~ 312 (353)
T cd03811 244 -LAD--RVHFLGFQ--SNPYPYLKAADLFVLSSR--YEGFPNVLLEAMALGTPVVATDCPGPREILED--GENGLLVP 312 (353)
T ss_pred -CCc--cEEEeccc--CCHHHHHHhCCEEEeCcc--cCCCCcHHHHHHHhCCCEEEcCCCChHHHhcC--CCceEEEC
Confidence 334 56666553 334568999999999999 79999999999999999999988877665543 34566553
No 78
>cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases. wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea.
Probab=97.51 E-value=0.00041 Score=75.84 Aligned_cols=104 Identities=16% Similarity=0.172 Sum_probs=79.9
Q ss_pred ceEeecccchhhhhhhhhhhHHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcCCCC
Q 003188 565 LFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNS 644 (840)
Q Consensus 565 l~d~~vkR~heYKRq~Lnll~ii~~y~~ik~~~p~~~~~~~p~~~If~GKA~P~y~~aK~iIk~I~~la~~in~d~~~~~ 644 (840)
.+.+++.|+..+|+++. ++..+.++ |..+++.|.+..... +.+ . ..+
T Consensus 196 ~~il~~G~~~~~K~~~~-li~a~~~~---------------~~~l~ivG~g~~~~~--------l~~--~-------~~~ 242 (351)
T cd03804 196 DYYLSVGRLVPYKRIDL-AIEAFNKL---------------GKRLVVIGDGPELDR--------LRA--K-------AGP 242 (351)
T ss_pred CEEEEEEcCccccChHH-HHHHHHHC---------------CCcEEEEECChhHHH--------HHh--h-------cCC
Confidence 45789999999999998 77665321 467899998643211 111 1 234
Q ss_pred cceEEEEcCCCHHHHhhhccCccccccCCCCCccCCCcchhHHhhcCceEeeecCchhHHHH
Q 003188 645 YLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIR 706 (840)
Q Consensus 645 ~lkVvFl~nYnvslA~~ii~gaDv~l~iS~a~~EAsGTs~MKam~NGal~i~tlDGanvEi~ 706 (840)
+|.|+..-+-+-...++.+||+.+.||+ |..|++-+-+|..|.+.|+|-.|...|++
T Consensus 243 --~V~~~g~~~~~~~~~~~~~ad~~v~ps~---e~~g~~~~Eama~G~Pvi~~~~~~~~e~i 299 (351)
T cd03804 243 --NVTFLGRVSDEELRDLYARARAFLFPAE---EDFGIVPVEAMASGTPVIAYGKGGALETV 299 (351)
T ss_pred --CEEEecCCCHHHHHHHHHhCCEEEECCc---CCCCchHHHHHHcCCCEEEeCCCCCccee
Confidence 7999998888888899999999999987 99999999999999999999766654433
No 79
>TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase. Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise.
Probab=97.40 E-value=0.016 Score=67.95 Aligned_cols=137 Identities=13% Similarity=0.102 Sum_probs=94.1
Q ss_pred HHHHhCCCCCCCCceEeecccchhhhhhhhhhhHHHHHHHHHhhcCccccCCCCCeEEEEEecCCcC-CHHHHHHHHHHH
Q 003188 552 IWRVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFAT-YTNAKRIVKLVN 630 (840)
Q Consensus 552 i~~~~G~~~dp~~l~d~~vkR~heYKRq~Lnll~ii~~y~~ik~~~p~~~~~~~p~~~If~GKA~P~-y~~aK~iIk~I~ 630 (840)
+++++| +..+++.|-|+..-|+... .|...+++++ + +|+.+ ..+++|..|.+.-. -..-+++.+.|.
T Consensus 278 lr~~~~-----~~kiIl~VDRLDy~KGI~~-kl~Afe~~L~--~-~Pe~~---gkv~Lvqi~~psr~~v~~y~~l~~~v~ 345 (487)
T TIGR02398 278 IRSELA-----GVKLILSAERVDYTKGILE-KLNAYERLLE--R-RPELL---GKVTLVTACVPAASGMTIYDELQGQIE 345 (487)
T ss_pred HHHHcC-----CceEEEEecccccccCHHH-HHHHHHHHHH--h-Ccccc---CceEEEEEeCCCcccchHHHHHHHHHH
Confidence 345656 4568889999999999999 9999999865 4 66542 24677766655422 222355678888
Q ss_pred HHHhhhcCCcCCCCcceEEEEcCC-CHHHHhhhccCccccccCCCCCccCCCcchhHHh-----hcCceEeeecCchh
Q 003188 631 DVGEVVNTDPEVNSYLKVVFVPNY-NVSVAELLIPGSELSQHISTAGMEASGTSNMKFS-----LNGCLIIGTLDGAN 702 (840)
Q Consensus 631 ~la~~in~d~~~~~~lkVvFl~nY-nvslA~~ii~gaDv~l~iS~a~~EAsGTs~MKam-----~NGal~i~tlDGan 702 (840)
+++..||..=...+.--|+++.++ .-+.--.++.+|||.+-+|+ .|.=++.-.-++ ..|.|.+|-.-|+-
T Consensus 346 ~~v~~IN~~fg~~~~~pv~~~~~~v~~~el~alYr~ADV~lvT~l--rDGmNLVa~Eyva~~~~~~GvLILSefaGaa 421 (487)
T TIGR02398 346 QAVGRINGRFARIGWTPLQFFTRSLPYEEVSAWFAMADVMWITPL--RDGLNLVAKEYVAAQGLLDGVLVLSEFAGAA 421 (487)
T ss_pred HHHHHHhhccCCCCCccEEEEcCCCCHHHHHHHHHhCCEEEECcc--ccccCcchhhHHhhhcCCCCCEEEeccccch
Confidence 888888764322233346666554 55555668999999999999 666655554443 36899998887774
No 80
>PLN02846 digalactosyldiacylglycerol synthase
Probab=97.35 E-value=0.0016 Score=75.82 Aligned_cols=119 Identities=16% Similarity=0.097 Sum_probs=87.0
Q ss_pred ceEeecccchhhhhhhhhhhHHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcCCCC
Q 003188 565 LFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNS 644 (840)
Q Consensus 565 l~d~~vkR~heYKRq~Lnll~ii~~y~~ik~~~p~~~~~~~p~~~If~GKA~P~y~~aK~iIk~I~~la~~in~d~~~~~ 644 (840)
+..++|.|++..|+... ++..+.++.+ . . ....+++.|.+.-... +.+.++.. +
T Consensus 229 ~~~l~vGRL~~eK~~~~-Li~a~~~l~~--~-~-------~~~~l~ivGdGp~~~~--------L~~~a~~l------~- 282 (462)
T PLN02846 229 KGAYYIGKMVWSKGYKE-LLKLLHKHQK--E-L-------SGLEVDLYGSGEDSDE--------VKAAAEKL------E- 282 (462)
T ss_pred eEEEEEecCcccCCHHH-HHHHHHHHHh--h-C-------CCeEEEEECCCccHHH--------HHHHHHhc------C-
Confidence 45789999999999999 8887766543 1 1 1468999999933222 34444421 1
Q ss_pred cceEEEEcCCCHHHHhhhccCccccccCCCCCccCCCcchhHHhhcCceEeeecCchhHHHHHHhcCcceEee
Q 003188 645 YLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLF 717 (840)
Q Consensus 645 ~lkVvFl~nYnvslA~~ii~gaDv~l~iS~a~~EAsGTs~MKam~NGal~i~tlDGanvEi~~~vG~~N~~~f 717 (840)
+.+.|..++. ..+.+++++||+.++|+ .|--|+.-+-||..|.+.|++-.|.+ |++.. +.|++++
T Consensus 283 -l~~~vf~G~~--~~~~~~~~~DvFv~pS~--~Et~g~v~lEAmA~G~PVVa~~~~~~-~~v~~--~~ng~~~ 347 (462)
T PLN02846 283 -LDVRVYPGRD--HADPLFHDYKVFLNPST--TDVVCTTTAEALAMGKIVVCANHPSN-EFFKQ--FPNCRTY 347 (462)
T ss_pred -CcEEEECCCC--CHHHHHHhCCEEEECCC--cccchHHHHHHHHcCCcEEEecCCCc-ceeec--CCceEec
Confidence 2344566663 44579999999999999 99999999999999999999987765 65554 4566665
No 81
>TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=97.26 E-value=0.0021 Score=72.20 Aligned_cols=162 Identities=7% Similarity=0.082 Sum_probs=100.6
Q ss_pred ccccCCcccchhhhhHHHHHhhhhcCccccCCCCCcccccccCcccccccCChhhhHHHHhhcCccccccChhhHhhhhc
Q 003188 447 CVVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLLVGLRQ 526 (840)
Q Consensus 447 ai~~S~~VNgVS~lH~eilk~~~f~~~~~l~p~k~~~iTNGI~~rrWl~~~NP~l~~li~~~~g~~~w~~~~~~l~~l~~ 526 (840)
.+..++.|-.||+--.+.+++. ....+.++.-|-|||+...+ .|.
T Consensus 169 ~~~~ad~vi~~S~~~~~~l~~~-----~~~~~~~v~vipngvd~~~f----~~~-------------------------- 213 (397)
T TIGR03087 169 IAARFDAATFVSRAEAELFRRL-----APEAAGRITAFPNGVDADFF----SPD-------------------------- 213 (397)
T ss_pred HHhhCCeEEEcCHHHHHHHHHh-----CCCCCCCeEEeecccchhhc----CCC--------------------------
Confidence 3446788888998766665531 12235677888999998766 121
Q ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCceEeecccchhhhhhhhhhhHHHHH-HHHHhhcCccccCCCC
Q 003188 527 FADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYR-YKKLKEMSPQERKKTT 605 (840)
Q Consensus 527 ~~~d~~~~~~~~~~K~~nK~~L~~~i~~~~G~~~dp~~l~d~~vkR~heYKRq~Lnll~ii~~-y~~ik~~~p~~~~~~~ 605 (840)
.+ . . ....++..+++++.|+..+|+.+. ++..+.. +..++... .
T Consensus 214 --~~------~-~------------------~~~~~~~~~ilf~G~l~~~k~~~~-l~~~~~~~~~~l~~~~-------p 258 (397)
T TIGR03087 214 --RD------Y-P------------------NPYPPGKRVLVFTGAMDYWPNIDA-VVWFAERVFPAVRARR-------P 258 (397)
T ss_pred --cc------c-c------------------CCCCCCCcEEEEEEecCCccCHHH-HHHHHHHHHHHHHHHC-------C
Confidence 00 0 0 011245678899999999999987 6654433 22333211 2
Q ss_pred CeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcCCCCcceEEEEcCCCHHHHhhhccCccccccCCCCCccCCCcchh
Q 003188 606 PRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNM 685 (840)
Q Consensus 606 p~~~If~GKA~P~y~~aK~iIk~I~~la~~in~d~~~~~~lkVvFl~nYnvslA~~ii~gaDv~l~iS~a~~EAsGTs~M 685 (840)
..++++.|.+... .+.+++. .+ +|.|...-+ .+ ..++++||++..||+.+ |..|+.-+
T Consensus 259 ~~~l~ivG~g~~~---------~~~~l~~--------~~--~V~~~G~v~-~~-~~~~~~adv~v~Ps~~~-eG~~~~~l 316 (397)
T TIGR03087 259 AAEFYIVGAKPSP---------AVRALAA--------LP--GVTVTGSVA-DV-RPYLAHAAVAVAPLRIA-RGIQNKVL 316 (397)
T ss_pred CcEEEEECCCChH---------HHHHhcc--------CC--CeEEeeecC-CH-HHHHHhCCEEEeccccc-CCcccHHH
Confidence 4789999987531 1233332 12 366654333 33 56789999999999722 55555678
Q ss_pred HHhhcCceEeeecCc
Q 003188 686 KFSLNGCLIIGTLDG 700 (840)
Q Consensus 686 Kam~NGal~i~tlDG 700 (840)
=||..|.+.|+|-.|
T Consensus 317 EAma~G~PVV~t~~~ 331 (397)
T TIGR03087 317 EAMAMAKPVVASPEA 331 (397)
T ss_pred HHHHcCCCEEecCcc
Confidence 899999999988443
No 82
>KOG1111 consensus N-acetylglucosaminyltransferase complex, subunit PIG-A/SPT14, required for phosphatidylinositol biosynthesis/Sulfolipid synthase [Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones; Lipid transport and metabolism]
Probab=96.82 E-value=0.013 Score=65.54 Aligned_cols=113 Identities=15% Similarity=0.092 Sum_probs=91.6
Q ss_pred CCCceEeecccchhhhhhhhhhhHHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcC
Q 003188 562 PNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPE 641 (840)
Q Consensus 562 p~~l~d~~vkR~heYKRq~Lnll~ii~~y~~ik~~~p~~~~~~~p~~~If~GKA~P~y~~aK~iIk~I~~la~~in~d~~ 641 (840)
.+.+.++.+.|+---|+.|| ++.+|.+..+ . .| .+.|||+|-|-..... .++-++. .
T Consensus 193 ~~i~~ivv~sRLvyrKGiDl-l~~iIp~vc~--~-~p-------~vrfii~GDGPk~i~l--------ee~lEk~----~ 249 (426)
T KOG1111|consen 193 ADIITIVVASRLVYRKGIDL-LLEIIPSVCD--K-HP-------EVRFIIIGDGPKRIDL--------EEMLEKL----F 249 (426)
T ss_pred CCeeEEEEEeeeeeccchHH-HHHHHHHHHh--c-CC-------CeeEEEecCCcccchH--------HHHHHHh----h
Confidence 34489999999999999999 9999999876 2 22 4789999999766653 2222221 2
Q ss_pred CCCcceEEEEcCCCHHHHhhhccCccccccCCCCCccCCCcchhHHhhcCceEeeecCch
Q 003188 642 VNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGA 701 (840)
Q Consensus 642 ~~~~lkVvFl~nYnvslA~~ii~gaDv~l~iS~a~~EAsGTs~MKam~NGal~i~tlDGa 701 (840)
..+ +|+++-.-.=+--+.++.-.|+++|+|. .||=|+.=.-||--|-..+||.-|.
T Consensus 250 l~~--rV~~lG~v~h~~Vr~vl~~G~IFlntSl--TEafc~~ivEAaScGL~VVsTrVGG 305 (426)
T KOG1111|consen 250 LQD--RVVMLGTVPHDRVRDVLVRGDIFLNTSL--TEAFCMVIVEAASCGLPVVSTRVGG 305 (426)
T ss_pred ccC--ceEEecccchHHHHHHHhcCcEEeccHH--HHHHHHHHHHHHhCCCEEEEeecCC
Confidence 556 8999988877778888888999999999 9999999999999999999995444
No 83
>PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional
Probab=96.38 E-value=0.015 Score=64.59 Aligned_cols=122 Identities=11% Similarity=0.052 Sum_probs=81.1
Q ss_pred CceEeecccchhh--hhhhhhhhHHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcC
Q 003188 564 SLFDIQVKRIHEY--KRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPE 641 (840)
Q Consensus 564 ~l~d~~vkR~heY--KRq~Lnll~ii~~y~~ik~~~p~~~~~~~p~~~If~GKA~P~y~~aK~iIk~I~~la~~in~d~~ 641 (840)
.+..+++.|+..+ |+... ++..+.+ ++ .+..+++.|.+.. ... +.+.++.. .
T Consensus 180 ~~~i~~~Grl~~~~~k~~~~-l~~a~~~---~~----------~~~~l~ivG~g~~-~~~-------l~~~~~~~----~ 233 (359)
T PRK09922 180 PAVFLYVGRLKFEGQKNVKE-LFDGLSQ---TT----------GEWQLHIIGDGSD-FEK-------CKAYSREL----G 233 (359)
T ss_pred CcEEEEEEEEecccCcCHHH-HHHHHHh---hC----------CCeEEEEEeCCcc-HHH-------HHHHHHHc----C
Confidence 4567888898754 76665 5554433 22 1578999998742 222 33333322 2
Q ss_pred CCCcceEEEEcCCCH--HHHhhhccCccccccCCCCCccCCCcchhHHhhcCceEeeec-CchhHHHHHHhcCcceEee
Q 003188 642 VNSYLKVVFVPNYNV--SVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTL-DGANVEIRQEIGEENFFLF 717 (840)
Q Consensus 642 ~~~~lkVvFl~nYnv--slA~~ii~gaDv~l~iS~a~~EAsGTs~MKam~NGal~i~tl-DGanvEi~~~vG~~N~~~f 717 (840)
+++ +|.|+.--+. +.-...+..||++..+|+ .|+.|.+-.=||..|.+.|+|- .|..-|+++. +.|++++
T Consensus 234 l~~--~v~f~G~~~~~~~~~~~~~~~~d~~v~~s~--~Egf~~~~lEAma~G~Pvv~s~~~~g~~eiv~~--~~~G~lv 306 (359)
T PRK09922 234 IEQ--RIIWHGWQSQPWEVVQQKIKNVSALLLTSK--FEGFPMTLLEAMSYGIPCISSDCMSGPRDIIKP--GLNGELY 306 (359)
T ss_pred CCC--eEEEecccCCcHHHHHHHHhcCcEEEECCc--ccCcChHHHHHHHcCCCEEEeCCCCChHHHccC--CCceEEE
Confidence 455 7888754333 444556778999999999 8999999999999999999886 5655555543 3455555
No 84
>PLN02275 transferase, transferring glycosyl groups
Probab=96.35 E-value=0.022 Score=63.86 Aligned_cols=136 Identities=13% Similarity=0.084 Sum_probs=89.7
Q ss_pred ceEeecccchhhhhhhhhhhHHHHHHHHHhhcCccc-------cCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhc
Q 003188 565 LFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQE-------RKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVN 637 (840)
Q Consensus 565 l~d~~vkR~heYKRq~Lnll~ii~~y~~ik~~~p~~-------~~~~~p~~~If~GKA~P~y~~aK~iIk~I~~la~~in 637 (840)
.+.+.+.|+...|+.+. ++..+..+......-... ......+.|++.|.+.- -.. +.+.++..
T Consensus 214 ~~i~~~grl~~~k~~~~-li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~i~l~ivG~G~~-~~~-------l~~~~~~~- 283 (371)
T PLN02275 214 ALVVSSTSWTPDEDFGI-LLEAAVMYDRRVAARLNESDSASGKQSLYPRLLFIITGKGPQ-KAM-------YEEKISRL- 283 (371)
T ss_pred EEEEEeCceeccCCHHH-HHHHHHHHHhhhhhccccccccccccccCCCeEEEEEeCCCC-HHH-------HHHHHHHc-
Confidence 45668899999999998 888777664211000000 00012489999998852 121 22333221
Q ss_pred CCcCCCCcceEEEEcCC-CHHHHhhhccCccccccCCCCC-ccCCCcchhHHhhcCceEeeecCchhHHHHHHhcCcceE
Q 003188 638 TDPEVNSYLKVVFVPNY-NVSVAELLIPGSELSQHISTAG-MEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFF 715 (840)
Q Consensus 638 ~d~~~~~~lkVvFl~nY-nvslA~~ii~gaDv~l~iS~a~-~EAsGTs~MKam~NGal~i~tlDGanvEi~~~vG~~N~~ 715 (840)
.+. .|+|+..| .-+--..++++||++..++... .|..|+.-+=+|.-|.+.|+|..|..-|+++. ++|+|
T Consensus 284 ---~l~---~v~~~~~~~~~~~~~~~l~~aDv~v~~~~s~~~e~~p~~llEAmA~G~PVVa~~~gg~~eiv~~--g~~G~ 355 (371)
T PLN02275 284 ---NLR---HVAFRTMWLEAEDYPLLLGSADLGVSLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIGELVKD--GKNGL 355 (371)
T ss_pred ---CCC---ceEEEcCCCCHHHHHHHHHhCCEEEEeccccccccccHHHHHHHHCCCCEEEecCCChHHHccC--CCCeE
Confidence 133 38888764 4455567899999998653221 26677888999999999999999998787765 57899
Q ss_pred eec
Q 003188 716 LFG 718 (840)
Q Consensus 716 ~fG 718 (840)
++.
T Consensus 356 lv~ 358 (371)
T PLN02275 356 LFS 358 (371)
T ss_pred EEC
Confidence 986
No 85
>PLN02501 digalactosyldiacylglycerol synthase
Probab=96.18 E-value=0.012 Score=71.23 Aligned_cols=127 Identities=12% Similarity=0.026 Sum_probs=87.1
Q ss_pred HhCCCCCCCCceEeecccchhhhhhhhhhhHHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHh
Q 003188 555 VTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGE 634 (840)
Q Consensus 555 ~~G~~~dp~~l~d~~vkR~heYKRq~Lnll~ii~~y~~ik~~~p~~~~~~~p~~~If~GKA~P~y~~aK~iIk~I~~la~ 634 (840)
+.|+..++. -..+|.||+..|+.+. ++..+..+.. . . ....++++|.+.-. .. +...+.
T Consensus 539 ~lgi~~~~k--giLfVGRLa~EKGld~-LLeAla~L~~--~-~-------pnvrLvIVGDGP~r-ee-------Le~la~ 597 (794)
T PLN02501 539 ELGQQAFSK--GAYFLGKMVWAKGYRE-LIDLLAKHKN--E-L-------DGFNLDVFGNGEDA-HE-------VQRAAK 597 (794)
T ss_pred hcCCccccC--ceEEEEcccccCCHHH-HHHHHHHHHh--h-C-------CCeEEEEEcCCccH-HH-------HHHHHH
Confidence 345543332 2467889999999999 8887766533 1 1 24789999987422 11 333333
Q ss_pred hhcCCcCCCCcceEEEEcCCCHHHHhhhccCccccccCCCCCccCCCcchhHHhhcCceEeeecCchhHHHHHHhcCcce
Q 003188 635 VVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENF 714 (840)
Q Consensus 635 ~in~d~~~~~~lkVvFl~nYnvslA~~ii~gaDv~l~iS~a~~EAsGTs~MKam~NGal~i~tlDGanvEi~~~vG~~N~ 714 (840)
.. -++|.|+.. ...+..+++++||+.+||+ .|.-|+.-+=||..|.+.|+|-.|.+.. +. ++.|+
T Consensus 598 eL--------gL~V~FLG~--~dd~~~lyasaDVFVlPS~--sEgFGlVlLEAMA~GlPVVATd~pG~e~-V~--~g~nG 662 (794)
T PLN02501 598 RL--------DLNLNFLKG--RDHADDSLHGYKVFINPSI--SDVLCTATAEALAMGKFVVCADHPSNEF-FR--SFPNC 662 (794)
T ss_pred Hc--------CCEEEecCC--CCCHHHHHHhCCEEEECCC--cccchHHHHHHHHcCCCEEEecCCCCce-Ee--ecCCe
Confidence 21 125778744 4556689999999999999 9999999999999999999997776522 21 24566
Q ss_pred Eee
Q 003188 715 FLF 717 (840)
Q Consensus 715 ~~f 717 (840)
+++
T Consensus 663 ll~ 665 (794)
T PLN02501 663 LTY 665 (794)
T ss_pred Eec
Confidence 655
No 86
>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=95.89 E-value=1 Score=56.89 Aligned_cols=126 Identities=14% Similarity=0.185 Sum_probs=82.1
Q ss_pred CceEeecccchhhhhhhhhhhHHHHHHHHHhhcCccccCCCCCeEEEEEec----CCcCCHHHHHHHHHHHHHHhhhcCC
Q 003188 564 SLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGK----AFATYTNAKRIVKLVNDVGEVVNTD 639 (840)
Q Consensus 564 ~l~d~~vkR~heYKRq~Lnll~ii~~y~~ik~~~p~~~~~~~p~~~If~GK----A~P~y~~aK~iIk~I~~la~~in~d 639 (840)
.-+++-|-|+..-|+... .|...+++++ . +|..+ ..+++|=..- .-|.|. ++-+.|.++...||..
T Consensus 363 ~kiIlgVDRLD~~KGI~~-kL~AfE~fL~--~-~Pe~r---~kVVLvQIa~psr~~v~eY~---~l~~~V~~~V~rIN~~ 432 (934)
T PLN03064 363 RKVMLGVDRLDMIKGIPQ-KILAFEKFLE--E-NPEWR---DKVVLLQIAVPTRTDVPEYQ---KLTSQVHEIVGRINGR 432 (934)
T ss_pred ceEEEEeeccccccCHHH-HHHHHHHHHH--h-Ccccc---CCEEEEEEcCCCCCCcHHHH---HHHHHHHHHHHHHhhh
Confidence 458889999999999998 8888888865 4 66543 1233332221 123443 3455677777777743
Q ss_pred cCCCCcceEEEEcCCCHHHHh--hhccCccccccCCCCCccCCCcchhHHhhc-----CceEeeecCchh
Q 003188 640 PEVNSYLKVVFVPNYNVSVAE--LLIPGSELSQHISTAGMEASGTSNMKFSLN-----GCLIIGTLDGAN 702 (840)
Q Consensus 640 ~~~~~~lkVvFl~nYnvslA~--~ii~gaDv~l~iS~a~~EAsGTs~MKam~N-----Gal~i~tlDGan 702 (840)
=-..+..-|.++.. .++..+ -++.+|||.+-+|. .|--++--+-+|.- |.|.+|-.-|+.
T Consensus 433 fg~~~w~Pv~~~~~-~l~~eeL~AlY~~ADV~lvTsl--rDGmNLva~Eyva~~~~~~GvLILSEfaGaa 499 (934)
T PLN03064 433 FGTLTAVPIHHLDR-SLDFHALCALYAVTDVALVTSL--RDGMNLVSYEFVACQDSKKGVLILSEFAGAA 499 (934)
T ss_pred ccCCCcceEEEecc-CCCHHHHHHHHHhCCEEEeCcc--ccccCchHHHHHHhhcCCCCCeEEeCCCchH
Confidence 22223334666654 344444 58899999999999 77777777666654 888887766663
No 87
>COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=95.71 E-value=0.25 Score=50.70 Aligned_cols=117 Identities=18% Similarity=0.186 Sum_probs=80.6
Q ss_pred CceEeecccchhhhhhhhhhhHHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcCCC
Q 003188 564 SLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVN 643 (840)
Q Consensus 564 ~l~d~~vkR~heYKRq~Lnll~ii~~y~~ik~~~p~~~~~~~p~~~If~GKA~P~y~~aK~iIk~I~~la~~in~d~~~~ 643 (840)
..+.+++.|+.+.|+..+ ++..+..+.+.. ....+++.|.+... -. .+..+..... ..
T Consensus 199 ~~~i~~~g~~~~~k~~~~-~i~~~~~~~~~~----------~~~~~~~~g~~~~~---~~----~~~~~~~~~~----~~ 256 (381)
T COG0438 199 KFVVLYVGRLDPEKGLDL-LIEAAAKLKKRG----------PDIKLVIVGDGPER---RE----ELEKLAKKLG----LE 256 (381)
T ss_pred ceEEEEeeccChhcCHHH-HHHHHHHhhhhc----------CCeEEEEEcCCCcc---HH----HHHHHHHHhC----CC
Confidence 378899999999999999 877776665410 12788999988876 11 1222222211 12
Q ss_pred CcceEEEEcCCC-HHHHhhhccCccccccCCCCCccCCCcchhHHhhcCceEeeecCchhHHHHH
Q 003188 644 SYLKVVFVPNYN-VSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQ 707 (840)
Q Consensus 644 ~~lkVvFl~nYn-vslA~~ii~gaDv~l~iS~a~~EAsGTs~MKam~NGal~i~tlDGanvEi~~ 707 (840)
+ .|.|+-.-. ..+.. ++..||+..+||. .|+-|..-+-+|..|.+.|+|.-|...|+..
T Consensus 257 ~--~v~~~g~~~~~~~~~-~~~~~~~~v~ps~--~e~~~~~~~Ea~a~g~pvi~~~~~~~~e~~~ 316 (381)
T COG0438 257 D--NVKFLGYVPDEELAE-LLASADVFVLPSL--SEGFGLVLLEAMAAGTPVIASDVGGIPEVVE 316 (381)
T ss_pred C--cEEEecccCHHHHHH-HHHhCCEEEeccc--cccchHHHHHHHhcCCcEEECCCCChHHHhc
Confidence 3 577744333 34555 8888899999999 5999999999999998888886666655443
No 88
>PF11897 DUF3417: Protein of unknown function (DUF3417); InterPro: IPR024517 This domain of unknown function is found at the N terminus of members of the glycogen phosphorylase family.
Probab=95.48 E-value=0.0077 Score=57.84 Aligned_cols=42 Identities=19% Similarity=0.256 Sum_probs=26.9
Q ss_pred HHHHHHHHHHHHHHH--HHHHHhhhccccCCceEEEEEehhccccch
Q 003188 56 AFFATAESVRDRLIQ--QWNETYHHFNKVDPKQTYYLSMEFLQGRTL 100 (840)
Q Consensus 56 ~y~ala~~vrd~l~~--~w~~t~~~~~~~~~k~vyYlSmEfl~Gr~L 100 (840)
.|..+....++++.. .|..+ ......+.|+||||||+++.+|
T Consensus 75 ~~~~v~~~f~~Ym~~~~~W~~~---~~~~~~~~IAYFSmEfGlhesL 118 (118)
T PF11897_consen 75 RYDRVYARFEEYMSQKPTWFQE---PGDTPNPPIAYFSMEFGLHESL 118 (118)
T ss_pred HHHHHHHHHHHHHcCCCccccC---CCCCCCCCEEEEcccccccccC
Confidence 344444555555543 35554 2233568999999999999876
No 89
>KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=95.10 E-value=0.12 Score=60.54 Aligned_cols=133 Identities=16% Similarity=0.122 Sum_probs=87.8
Q ss_pred CCCCceEeecccchhhhhhhhhhhHHHHHHHHHhhcCccccCCCCCeEEEEEec--CCcCCHHHHHHHHHHHHHHhhhcC
Q 003188 561 DPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGK--AFATYTNAKRIVKLVNDVGEVVNT 638 (840)
Q Consensus 561 dp~~l~d~~vkR~heYKRq~Lnll~ii~~y~~ik~~~p~~~~~~~p~~~If~GK--A~P~y~~aK~iIk~I~~la~~in~ 638 (840)
.-.-.|+.-+-|+..-|+++| +|....++..... +| ++.-...+|+|+ -.+....-.+-++.+.++.+..+
T Consensus 270 ~~~d~~~~siN~~~pgkd~~l-~l~a~~~~~~~i~-~~----~~~~~hl~~~g~~G~d~~~sen~~~~~el~~lie~~~- 342 (495)
T KOG0853|consen 270 SGIDRFFPSINRFEPGKDQDL-ALPAFTLLHDSIP-EP----SISSEHLVVAGSRGYDERDSENVEYLKELLSLIEEYD- 342 (495)
T ss_pred cccceEeeeeeecCCCCCcee-ehhhHHhhhcccC-CC----CCCceEEEEecCCCccccchhhHHHHHHHHHHHHHhC-
Confidence 344588899999999999999 9997777765322 22 223466777773 34445555556666666666532
Q ss_pred CcCCCCcceEEEEcCCCHHHHhhhccCccccccCCCCCccCCCcchhHHhhcCceEeeecCchhHHHH
Q 003188 639 DPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIR 706 (840)
Q Consensus 639 d~~~~~~lkVvFl~nYnvslA~~ii~gaDv~l~iS~a~~EAsGTs~MKam~NGal~i~tlDGanvEi~ 706 (840)
-..+ .|.|++--+=+-- ..-++|.--..+++..|+=|.--.-||..|-++|+|--|.-+||+
T Consensus 343 --l~g~--~v~~~~s~~~~~~--yrl~adt~~v~~qPa~E~FGiv~IEAMa~glPvvAt~~GGP~EiV 404 (495)
T KOG0853|consen 343 --LLGQ--FVWFLPSTTRVAK--YRLAADTKGVLYQPANEHFGIVPIEAMACGLPVVATNNGGPAEIV 404 (495)
T ss_pred --ccCc--eEEEecCCchHHH--HHHHHhcceEEecCCCCCccceeHHHHhcCCCEEEecCCCceEEE
Confidence 2344 5677676544433 444555555555555899999999999999999999554443333
No 90
>KOG3742 consensus Glycogen synthase [Carbohydrate transport and metabolism]
Probab=93.77 E-value=0.076 Score=60.73 Aligned_cols=110 Identities=14% Similarity=0.227 Sum_probs=76.2
Q ss_pred cccccccccccCCcccchhhhhHHHHHhhhhcCccccCCCCCcccccccCcccccccCChhhhHHHHhhcCccccccChh
Q 003188 440 VVRMANLCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLD 519 (840)
Q Consensus 440 ~v~Ma~lai~~S~~VNgVS~lH~eilk~~~f~~~~~l~p~k~~~iTNGI~~rrWl~~~NP~l~~li~~~~g~~~w~~~~~ 519 (840)
+..|-..|...+|.-++||++-+-+.... ++ -.|+-+. -||.....+.+
T Consensus 242 rYC~ERaa~h~AhVFTTVSeITa~EAeHl-Lk----RKPD~it--PNGLNV~KFsA------------------------ 290 (692)
T KOG3742|consen 242 RYCLERAAAHTAHVFTTVSEITALEAEHL-LK----RKPDVIT--PNGLNVKKFSA------------------------ 290 (692)
T ss_pred HHHHHHHhhhhhhhhhhHHHHHHHHHHHH-Hh----cCCCeeC--CCCcceeehhH------------------------
Confidence 67899999999999999999877665532 21 1233222 27766554410
Q ss_pred hHhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhC--CCCC-CCCceEeecccc-hhhhhhhhhhhHHHHHHHHHhh
Q 003188 520 LLVGLRQFADNTELQAEWESAKMASKKHLADYIWRVTG--VTID-PNSLFDIQVKRI-HEYKRQLLNILGAIYRYKKLKE 595 (840)
Q Consensus 520 ~l~~l~~~~~d~~~~~~~~~~K~~nK~~L~~~i~~~~G--~~~d-p~~l~d~~vkR~-heYKRq~Lnll~ii~~y~~ik~ 595 (840)
+ .+++..+..+|++..++|+-++- +++| ...++.-.+.|- -.-|++++ .+..+.|+.-+..
T Consensus 291 --------~------HEFQNLHA~~KekIndFVRGHF~GhlDFdLdkTlyfFiAGRYEf~NKGaDm-FiEsLaRLN~~Lk 355 (692)
T KOG3742|consen 291 --------V------HEFQNLHAQKKEKINDFVRGHFHGHLDFDLDKTLYFFIAGRYEFSNKGADM-FIESLARLNYLLK 355 (692)
T ss_pred --------H------HHHHHHHHHHHHHHHHHhhhhccccccccccceEEEEEeeeeeeccCchHH-HHHHHHHhHHHHe
Confidence 0 12567889999999999998873 3333 245666667776 35699999 9999999986554
No 91
>PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A.
Probab=93.46 E-value=0.17 Score=47.51 Aligned_cols=102 Identities=15% Similarity=0.115 Sum_probs=63.8
Q ss_pred CCceEeecccchhhhhhhhhhhH-HHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcC
Q 003188 563 NSLFDIQVKRIHEYKRQLLNILG-AIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPE 641 (840)
Q Consensus 563 ~~l~d~~vkR~heYKRq~Lnll~-ii~~y~~ik~~~p~~~~~~~p~~~If~GKA~P~y~~aK~iIk~I~~la~~in~d~~ 641 (840)
|.++++.+.+++.+|+... ++. ++.++.+ . . .+.+++|.|...+ . +.++.
T Consensus 1 ~~~~i~~~g~~~~~k~~~~-li~~~~~~l~~--~-~-------p~~~l~i~G~~~~--~--------l~~~~-------- 51 (135)
T PF13692_consen 1 DILYIGYLGRIRPDKGLEE-LIEAALERLKE--K-H-------PDIELIIIGNGPD--E--------LKRLR-------- 51 (135)
T ss_dssp --EEEE--S-SSGGGTHHH-HHH-HHHHHHH--H-S-------TTEEEEEECESS---H--------HCCHH--------
T ss_pred Ccccccccccccccccccc-hhhhHHHHHHH--H-C-------cCEEEEEEeCCHH--H--------HHHhc--------
Confidence 4578999999999999998 888 7777655 2 2 2589999999555 1 11111
Q ss_pred CCCcceEEEEcCCCHHHHhhhccCccccccCCCCCccCCCcchhHHhhcCceEeeecC
Q 003188 642 VNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLD 699 (840)
Q Consensus 642 ~~~~lkVvFl~nYnvslA~~ii~gaDv~l~iS~a~~EAsGTs~MKam~NGal~i~tlD 699 (840)
.. +|.|+... .++ ..++++||+.+.|+.. -|.+++.-+-+|..|.+.|++-.
T Consensus 52 -~~--~v~~~g~~-~e~-~~~l~~~dv~l~p~~~-~~~~~~k~~e~~~~G~pvi~~~~ 103 (135)
T PF13692_consen 52 -RP--NVRFHGFV-EEL-PEILAAADVGLIPSRF-NEGFPNKLLEAMAAGKPVIASDN 103 (135)
T ss_dssp -HC--TEEEE-S--HHH-HHHHHC-SEEEE-BSS--SCC-HHHHHHHCTT--EEEEHH
T ss_pred -CC--CEEEcCCH-HHH-HHHHHhCCEEEEEeeC-CCcCcHHHHHHHHhCCCEEECCc
Confidence 11 68888887 344 5558889999998862 33667788889999999998744
No 92
>cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=92.88 E-value=0.76 Score=51.57 Aligned_cols=102 Identities=14% Similarity=0.086 Sum_probs=62.9
Q ss_pred CCceEeecccchhhhhhhhhhhHHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcCC
Q 003188 563 NSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEV 642 (840)
Q Consensus 563 ~~l~d~~vkR~heYKRq~Lnll~ii~~y~~ik~~~p~~~~~~~p~~~If~GKA~P~y~~aK~iIk~I~~la~~in~d~~~ 642 (840)
+.+..+++.++.+.+...| +. ...+ . .| ...|+|.|.+.+..... .+. ..
T Consensus 204 ~~~~i~y~G~l~~~~d~~l--l~---~la~--~-~p-------~~~~vliG~~~~~~~~~--------~~~-------~~ 253 (373)
T cd04950 204 PRPVIGYYGAIAEWLDLEL--LE---ALAK--A-RP-------DWSFVLIGPVDVSIDPS--------ALL-------RL 253 (373)
T ss_pred CCCEEEEEeccccccCHHH--HH---HHHH--H-CC-------CCEEEEECCCcCccChh--------Hhc-------cC
Confidence 4578899999988333223 22 2222 1 22 46899999874332221 111 11
Q ss_pred CCcceEEEEcCCCHHHHhhhccCccccccCCCCCccCCCcchhH---HhhcCceEeee
Q 003188 643 NSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMK---FSLNGCLIIGT 697 (840)
Q Consensus 643 ~~~lkVvFl~nYnvslA~~ii~gaDv~l~iS~a~~EAsGTs~MK---am~NGal~i~t 697 (840)
+ +|.|+.--.-+-....+.++|+.+.|+...--..+++.+| +|.-|.+.|+|
T Consensus 254 -~--nV~~~G~~~~~~l~~~l~~~Dv~l~P~~~~~~~~~~~P~Kl~EylA~G~PVVat 308 (373)
T cd04950 254 -P--NVHYLGPKPYKELPAYLAGFDVAILPFRLNELTRATSPLKLFEYLAAGKPVVAT 308 (373)
T ss_pred -C--CEEEeCCCCHHHHHHHHHhCCEEecCCccchhhhcCCcchHHHHhccCCCEEec
Confidence 2 5888876555566678899999999987432223445555 78889888877
No 93
>COG0380 OtsA Trehalose-6-phosphate synthase [Carbohydrate transport and metabolism]
Probab=90.35 E-value=9.4 Score=45.20 Aligned_cols=131 Identities=15% Similarity=0.124 Sum_probs=80.8
Q ss_pred CceEeecccchhhhhhhhhhhHHHHHHHHHhhcCccccCCCCCeEEEEEe-cCCcCCHHHHHHHHHHHHHHhhhcCCcCC
Q 003188 564 SLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGG-KAFATYTNAKRIVKLVNDVGEVVNTDPEV 642 (840)
Q Consensus 564 ~l~d~~vkR~heYKRq~Lnll~ii~~y~~ik~~~p~~~~~~~p~~~If~G-KA~P~y~~aK~iIk~I~~la~~in~d~~~ 642 (840)
.-+++-+-|+..=||..- =|...+++++ + +|..+. .+++|=.+ ...+.-..-+.+-+.|..+...||.-=-.
T Consensus 282 ~kiivgvDRlDy~kGi~~-rl~Afe~lL~--~-~Pe~~~---kvvliQi~~pSr~~v~~y~~~~~~i~~~V~rIN~~fG~ 354 (486)
T COG0380 282 KKLIVGVDRLDYSKGIPQ-RLLAFERLLE--E-YPEWRG---KVVLLQIAPPSREDVEEYQALRLQIEELVGRINGEFGS 354 (486)
T ss_pred ceEEEEehhcccccCcHH-HHHHHHHHHH--h-ChhhhC---ceEEEEecCCCccccHHHHHHHHHHHHHHHHHHhhcCC
Confidence 345666778888888776 6666777764 4 677542 34443333 33333333366778888888888853333
Q ss_pred CCcceEEEEcC-CCHHHHhhhccCccccccCCCCCccCCCcchhH----H---hhcCceEeeecCchhHHH
Q 003188 643 NSYLKVVFVPN-YNVSVAELLIPGSELSQHISTAGMEASGTSNMK----F---SLNGCLIIGTLDGANVEI 705 (840)
Q Consensus 643 ~~~lkVvFl~n-YnvslA~~ii~gaDv~l~iS~a~~EAsGTs~MK----a---m~NGal~i~tlDGanvEi 705 (840)
-+..-|.|+.- .+-..--.++..||+.+-+|++ -|.+-+. + ..+|.|.+|-.-|+--|.
T Consensus 355 ~~~~Pv~~l~~~~~~~~l~al~~~aDv~lVtplr----DGMNLvakEyVa~q~~~~G~LiLSeFaGaa~~L 421 (486)
T COG0380 355 LSWTPVHYLHRDLDRNELLALYRAADVMLVTPLR----DGMNLVAKEYVAAQRDKPGVLILSEFAGAASEL 421 (486)
T ss_pred CCcceeEEEeccCCHHHHHHHHhhhceeeecccc----ccccHHHHHHHHhhcCCCCcEEEeccccchhhh
Confidence 33334555533 4444444588999999999994 3443221 1 237999999888886443
No 94
>TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1. This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=90.14 E-value=3.6 Score=49.11 Aligned_cols=177 Identities=15% Similarity=0.116 Sum_probs=111.6
Q ss_pred CCCceEeecccchhhhhhhhhhhHHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCc-
Q 003188 562 PNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDP- 640 (840)
Q Consensus 562 p~~l~d~~vkR~heYKRq~Lnll~ii~~y~~ik~~~p~~~~~~~p~~~If~GKA~P~y~~aK~iIk~I~~la~~in~d~- 640 (840)
+.+++-+.|-|+ +-|+.+- ++..+.++.. . +| ..++.|-|.+.+.. ..+.+-++|.++....+.+.
T Consensus 319 ~~~~I~v~idrL-~ek~~~~-~I~av~~~~~--~-~p-------~~~L~~~gy~~~~~-~~~~l~~~i~~~~~~~~~~~~ 385 (519)
T TIGR03713 319 YETEIGFWIDGL-SDEELQQ-ILQQLLQYIL--K-NP-------DYELKILTYNNDND-ITQLLEDILEQINEEYNQDKN 385 (519)
T ss_pred cceEEEEEcCCC-ChHHHHH-HHHHHHHHHh--h-CC-------CeEEEEEEecCchh-HHHHHHHHHHHHHhhhchhhh
Confidence 455666666799 9999998 8888888866 2 33 47899999986532 23333344444422211111
Q ss_pred -----------------CCCCcceEEEEcCCCH--HHHhhhccCccccccCCCCCccCCCcchhHHhhcCceEeeecCch
Q 003188 641 -----------------EVNSYLKVVFVPNYNV--SVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGA 701 (840)
Q Consensus 641 -----------------~~~~~lkVvFl~nYnv--slA~~ii~gaDv~l~iS~a~~EAsGTs~MKam~NGal~i~tlDGa 701 (840)
+-......|.+.+|-- .+. ..+.-+.+...+|+ .|.=| ++|-|+--|.+-|
T Consensus 386 ~~~~~~~~~~~~~~~~~~~~~~~~~v~f~gy~~e~dl~-~~~~~arl~id~s~--~eg~~-~~ieAiS~GiPqI------ 455 (519)
T TIGR03713 386 FFSLSEQDENQPILQTDEEQKEKERIAFTTLTNEEDLI-SALDKLRLIIDLSK--EPDLY-TQISGISAGIPQI------ 455 (519)
T ss_pred ccccchhhhhhhcccchhhcccccEEEEEecCCHHHHH-HHHhhheEEEECCC--CCChH-HHHHHHHcCCCee------
Confidence 0000014688888877 666 77888899999888 88788 7888888887776
Q ss_pred hHHHHHHhcCcceEeecCccccchhhhhhccCCCCCCChhHHHHHHHHhcCCCCCCChHHHHHHHhhCCCCCCCcccccc
Q 003188 702 NVEIRQEIGEENFFLFGAVAEQVPKLRKEREDGLFKPDPRFEEAKQFIRSGAFGSYDYNPLLDSLEGNTGYGRGDYFLVG 781 (840)
Q Consensus 702 nvEi~~~vG~~N~~~fG~~~d~V~~~~~~~~y~~~~~~~~l~~v~~~~~~G~f~~~~~~~l~~~L~~~~~~~~~D~~~~~ 781 (840)
..|. .+-|.+ -.+|..- .+..+|.++|.
T Consensus 456 ------nyg~---------~~~V~d----------------------~~NG~li-~d~~~l~~al~-------------- 483 (519)
T TIGR03713 456 ------NKVE---------TDYVEH----------------------NKNGYII-DDISELLKALD-------------- 483 (519)
T ss_pred ------ecCC---------ceeeEc----------------------CCCcEEe-CCHHHHHHHHH--------------
Confidence 2222 112221 1223221 23455544432
Q ss_pred CChHHHHHHHHHHHHHhcCHHHHHHHHHHHhccCCCCChHHHHHHH
Q 003188 782 YDFPSYLEAQDRVDQAYKDQKKWLKMSILSTAGSGKFSSDRTIAQY 827 (840)
Q Consensus 782 ~Df~~y~~~~~~~~~~Y~d~~~W~~~~~~n~a~~g~FSsDrti~eY 827 (840)
.+..+++.|++++..++..+-.||++.-+...
T Consensus 484 --------------~~L~~~~~wn~~~~~sy~~~~~yS~~~i~~kW 515 (519)
T TIGR03713 484 --------------YYLDNLKNWNYSLAYSIKLIDDYSSENIIERL 515 (519)
T ss_pred --------------HHHhCHHHHHHHHHHHHHHHHHhhHHHHHHHH
Confidence 33468999999999999988899999887653
No 95
>PF00982 Glyco_transf_20: Glycosyltransferase family 20; InterPro: IPR001830 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 20 GT20 from CAZY comprises enzymes with only one known activity; alpha, alpha-trehalose-phosphate synthase [UDP-forming] (2.4.1.15 from EC). Synthesis of trehalose in the yeast Saccharomyces cerevisiae is catalysed by the trehalose-6-phosphate (Tre6P) synthase/phosphatase complex, which is composed of at least three different subunits encoded by the genes TPS1, TPS2, and TSL1. Tps1 and Tps2 carry the catalytic activities of trehalose synthesis, namely Tre6P synthase (Tps1) and Tre6P phosphatase (Tps2), while TsI1 has regulatory functions. There is some evidence that TsI1 and Tps3 may share a common function with respect to regulation and/or structural stabilisation of the Tre6P synthase/phosphatase complex in exponentially growing, heat-shocked cells []. OtsA (trehalose-6-phosphate synthase) from Escherichia coli has homology to the full-length TPS1, the N-terminal part of TPS2 and an internal region of TPS3 (TSL1) of yeast [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1UQU_A 2WTX_A 1UQT_B 1GZ5_B.
Probab=89.53 E-value=13 Score=43.96 Aligned_cols=127 Identities=16% Similarity=0.197 Sum_probs=71.1
Q ss_pred CceEeecccchhhhhhhhhhhHHHHHHHHHhhcCccccCCCCCeEEEEEec-CCcCCHHHHHHHHHHHHHHhhhcCCcCC
Q 003188 564 SLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGK-AFATYTNAKRIVKLVNDVGEVVNTDPEV 642 (840)
Q Consensus 564 ~l~d~~vkR~heYKRq~Lnll~ii~~y~~ik~~~p~~~~~~~p~~~If~GK-A~P~y~~aK~iIk~I~~la~~in~d~~~ 642 (840)
.-+++-|-|+..-|+..+ =|..++++++ + +|..+ ..+++|=.+- +-..-..-.++-..|.+++..||..=--
T Consensus 276 ~~ii~gvDrld~~kGi~~-kl~Afe~fL~--~-~P~~~---~kv~liQi~~psr~~~~~y~~~~~~v~~~v~~IN~~~g~ 348 (474)
T PF00982_consen 276 RKIIVGVDRLDYTKGIPE-KLRAFERFLE--R-YPEYR---GKVVLIQIAVPSREDVPEYQELRREVEELVGRINGKYGT 348 (474)
T ss_dssp SEEEEEE--B-GGG-HHH-HHHHHHHHHH--H--GGGT---TTEEEEEE--B-STTSHHHHHHHHHHHHHHHHHHHHH-B
T ss_pred cEEEEEeccchhhcCHHH-HHHHHHHHHH--h-CcCcc---CcEEEEEEeeccCccchhHHHHHHHHHHHHHHHHhhccc
Confidence 467888999999999999 8888999876 4 78764 2355553332 2222333446777888888888863222
Q ss_pred CCcceEEEEcCCCHHHHh--hhccCccccccCCCCCccCCCcchhH---Hh----hcCceEeeecCchh
Q 003188 643 NSYLKVVFVPNYNVSVAE--LLIPGSELSQHISTAGMEASGTSNMK---FS----LNGCLIIGTLDGAN 702 (840)
Q Consensus 643 ~~~lkVvFl~nYnvslA~--~ii~gaDv~l~iS~a~~EAsGTs~MK---am----~NGal~i~tlDGan 702 (840)
.+.--|.++.. +++.++ -++..||+.+-+|++ .|.+=+- .+ -.|+|.+|..-|+-
T Consensus 349 ~~~~PI~~~~~-~~~~~~~~aly~~aDv~lvTslr----DGmNLva~Eyva~q~~~~GvLiLSefaGaa 412 (474)
T PF00982_consen 349 PDWTPIIYIYR-SLSFEELLALYRAADVALVTSLR----DGMNLVAKEYVACQDDNPGVLILSEFAGAA 412 (474)
T ss_dssp TTB-SEEEE-S----HHHHHHHHHH-SEEEE--SS----BS--HHHHHHHHHS-TS--EEEEETTBGGG
T ss_pred CCceeEEEEec-CCCHHHHHHHHHhhhhEEecchh----hccCCcceEEEEEecCCCCceEeeccCCHH
Confidence 23334788886 555555 478999999999993 3332110 11 46999999988884
No 96
>PRK10117 trehalose-6-phosphate synthase; Provisional
Probab=88.95 E-value=24 Score=41.77 Aligned_cols=129 Identities=11% Similarity=0.021 Sum_probs=81.9
Q ss_pred CceEeecccchhhhhhhhhhhHHHHHHHHHhhcCccccCCCCCeEEEEEecCCc-CCHHHHHHHHHHHHHHhhhcCCcCC
Q 003188 564 SLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFA-TYTNAKRIVKLVNDVGEVVNTDPEV 642 (840)
Q Consensus 564 ~l~d~~vkR~heYKRq~Lnll~ii~~y~~ik~~~p~~~~~~~p~~~If~GKA~P-~y~~aK~iIk~I~~la~~in~d~~~ 642 (840)
.-+++-|-|+.--|+... =|...+++++ . +|+.+ ..+++|=.+-..- .-..-+++-+.|.++...||..=--
T Consensus 255 ~~lilgVDRLDytKGi~~-rl~Afe~fL~--~-~Pe~~---gkvvlvQia~psR~~v~~Y~~l~~~v~~~vg~INg~fg~ 327 (474)
T PRK10117 255 VQNIFSVERLDYSKGLPE-RFLAYEALLE--K-YPQHH---GKIRYTQIAPTSRGDVQAYQDIRHQLETEAGRINGKYGQ 327 (474)
T ss_pred CeEEEEecccccccCHHH-HHHHHHHHHH--h-Chhhc---CCEEEEEEcCCCCCccHHHHHHHHHHHHHHHHHHhccCC
Confidence 346678899999999988 7788888876 3 67754 2344443322211 1122235667788888888865444
Q ss_pred CCcceEEEEcCCCHHHHh--hhccCccccccCCCC------CccCCCcchhHHhhcCceEeeecCchh
Q 003188 643 NSYLKVVFVPNYNVSVAE--LLIPGSELSQHISTA------GMEASGTSNMKFSLNGCLIIGTLDGAN 702 (840)
Q Consensus 643 ~~~lkVvFl~nYnvslA~--~ii~gaDv~l~iS~a------~~EAsGTs~MKam~NGal~i~tlDGan 702 (840)
.+..=|.++.. +++..+ -++.+|||-+-+|++ .+|-.-... --..|+|.+|-.-|+-
T Consensus 328 ~~w~Pv~y~~~-~~~~~~l~alyr~ADv~lVTplRDGMNLVAkEyva~q~--~~~~GvLILSefAGaA 392 (474)
T PRK10117 328 LGWTPLYYLNQ-HFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQD--PANPGVLVLSQFAGAA 392 (474)
T ss_pred CCceeEEEecC-CCCHHHHHHHHHhccEEEecccccccccccchheeeec--CCCCccEEEecccchH
Confidence 44445777655 455555 679999999999984 122211100 0135999999999995
No 97
>PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed
Probab=86.77 E-value=10 Score=43.15 Aligned_cols=117 Identities=17% Similarity=0.119 Sum_probs=66.4
Q ss_pred CCceEeecccchhhhhhhhhhhHHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHh--hhcCCc
Q 003188 563 NSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGE--VVNTDP 640 (840)
Q Consensus 563 ~~l~d~~vkR~heYKRq~Lnll~ii~~y~~ik~~~p~~~~~~~p~~~If~GKA~P~y~~aK~iIk~I~~la~--~in~d~ 640 (840)
+.++.+.+++. -|...+ ++..+.++.+ . .| ...+|++|.+ |. ...++.+++.+..- +.-...
T Consensus 232 ~~~vil~~~~~--~~~~~~-ll~A~~~l~~--~-~~-------~~~liivG~g-~~--r~~~l~~~~~~~gl~~~~~~~~ 295 (425)
T PRK05749 232 NRPVWIAASTH--EGEEEL-VLDAHRALLK--Q-FP-------NLLLILVPRH-PE--RFKEVEELLKKAGLSYVRRSQG 295 (425)
T ss_pred CCcEEEEeCCC--chHHHH-HHHHHHHHHH--h-CC-------CcEEEEcCCC-hh--hHHHHHHHHHhCCCcEEEccCC
Confidence 45666778764 366666 6676665533 1 22 4678898863 42 22344455444320 000000
Q ss_pred CCCCcceEEEEcCCCHHHHhhhccCcccccc-CCCCCccCCCcchhHHhhcCceEeeec
Q 003188 641 EVNSYLKVVFVPNYNVSVAELLIPGSELSQH-ISTAGMEASGTSNMKFSLNGCLIIGTL 698 (840)
Q Consensus 641 ~~~~~lkVvFl~nYnvslA~~ii~gaDv~l~-iS~a~~EAsGTs~MKam~NGal~i~tl 698 (840)
..++.-..|++-+.--.+ ..++++||+... .|. .|..|++-+=+|.-|.+.|++-
T Consensus 296 ~~~~~~~~v~l~~~~~el-~~~y~~aDi~~v~~S~--~e~~g~~~lEAma~G~PVI~g~ 351 (425)
T PRK05749 296 EPPSADTDVLLGDTMGEL-GLLYAIADIAFVGGSL--VKRGGHNPLEPAAFGVPVISGP 351 (425)
T ss_pred CCCCCCCcEEEEecHHHH-HHHHHhCCEEEECCCc--CCCCCCCHHHHHHhCCCEEECC
Confidence 000000134444433334 488899999554 566 5789999999999999999763
No 98
>PRK13609 diacylglycerol glucosyltransferase; Provisional
Probab=84.59 E-value=13 Score=41.53 Aligned_cols=44 Identities=11% Similarity=0.085 Sum_probs=31.0
Q ss_pred eEEEEcCCCHHHHhhhccCccccccCCCCCccCCCcchhHHhhcCceEeeec
Q 003188 647 KVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTL 698 (840)
Q Consensus 647 kVvFl~nYnvslA~~ii~gaDv~l~iS~a~~EAsGTs~MKam~NGal~i~tl 698 (840)
+|.|+ +|-..+ ..++++||+.. + ++.|.+-+=+|..|.+.|++-
T Consensus 257 ~v~~~-g~~~~~-~~l~~~aD~~v--~----~~gg~t~~EA~a~g~PvI~~~ 300 (380)
T PRK13609 257 ALKVF-GYVENI-DELFRVTSCMI--T----KPGGITLSEAAALGVPVILYK 300 (380)
T ss_pred cEEEE-echhhH-HHHHHhccEEE--e----CCCchHHHHHHHhCCCEEECC
Confidence 57776 453333 46789999975 2 455777778999999988763
No 99
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=83.89 E-value=45 Score=42.46 Aligned_cols=133 Identities=13% Similarity=0.111 Sum_probs=81.9
Q ss_pred CCCceEeecccchhhhhhhhhhhHHHHHHHHHhhcCccccCCCCCeEEEEEecCCc-CCHHHHHHHHHHHHHHhhhcCCc
Q 003188 562 PNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFA-TYTNAKRIVKLVNDVGEVVNTDP 640 (840)
Q Consensus 562 p~~l~d~~vkR~heYKRq~Lnll~ii~~y~~ik~~~p~~~~~~~p~~~If~GKA~P-~y~~aK~iIk~I~~la~~in~d~ 640 (840)
++..+++-|-|+.--|+..+ =|...+++++ . +|..+ ..+++|=..-..- .-..-+++-+.|.+++..||..=
T Consensus 337 ~~~~~ilgVDrlD~~KGi~~-kl~A~e~~L~--~-~P~~~---gkvvlvQia~psr~~~~~y~~~~~ev~~~v~rIN~~f 409 (854)
T PLN02205 337 QDRIMLLGVDDMDIFKGISL-KLLAMEQLLM--Q-HPEWQ---GKVVLVQIANPARGKGKDVKEVQAETHSTVKRINETF 409 (854)
T ss_pred CCCEEEEEccCcccccCHHH-HHHHHHHHHH--h-Ccccc---CCEEEEEEecCCCcccHHHHHHHHHHHHHHHHHHhhc
Confidence 35578889999999999999 6777888865 4 77654 2344443322211 11222345567788888887544
Q ss_pred CCCCcceEEEEcCCCHHHHh--hhccCccccccCCCCC------ccC--CCcch--hH-------H-hhcCceEeeecCc
Q 003188 641 EVNSYLKVVFVPNYNVSVAE--LLIPGSELSQHISTAG------MEA--SGTSN--MK-------F-SLNGCLIIGTLDG 700 (840)
Q Consensus 641 ~~~~~lkVvFl~nYnvslA~--~ii~gaDv~l~iS~a~------~EA--sGTs~--MK-------a-m~NGal~i~tlDG 700 (840)
-..+.--|+++.. .++..+ -++.+||+.+-+|++- +|- |-.++ |. . -..|+|.||-.-|
T Consensus 410 g~~~~~Pv~~~~~-~~~~~e~~aly~~ADv~lVT~lRDGMNLva~Eyia~~~~~~~~~~~~~~~~~~~~~gvLiLSEfaG 488 (854)
T PLN02205 410 GKPGYDPIVLIDA-PLKFYERVAYYVVAECCLVTAVRDGMNLIPYEYIISRQGNEKLDKLLGLEPSTPKKSMLVVSEFIG 488 (854)
T ss_pred CCCCCceEEEEec-CCCHHHHHHHHHhccEEEeccccccccccchheeEEccCccccccccccccccCCCCceEeeeccc
Confidence 3344445777754 444444 4799999999999852 232 32211 10 0 1368888888777
Q ss_pred hh
Q 003188 701 AN 702 (840)
Q Consensus 701 an 702 (840)
+-
T Consensus 489 aa 490 (854)
T PLN02205 489 CS 490 (854)
T ss_pred hh
Confidence 74
No 100
>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional
Probab=83.59 E-value=23 Score=39.17 Aligned_cols=100 Identities=11% Similarity=-0.027 Sum_probs=59.0
Q ss_pred CCCCceEeecccchhhhhhhhhhhHHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCc
Q 003188 561 DPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDP 640 (840)
Q Consensus 561 dp~~l~d~~vkR~heYKRq~Lnll~ii~~y~~ik~~~p~~~~~~~p~~~If~GKA~P~y~~aK~iIk~I~~la~~in~d~ 640 (840)
+++..++..+.|....|...--++..+..+ .. .|..+++.|.+.. +. +.+.+ + .
T Consensus 180 ~~~~~~i~~~gg~~~~~~~~~~l~~a~~~~---~~---------~~~~~~~~G~g~~--~~---~~~~~-~-~------- 233 (357)
T PRK00726 180 REGKPTLLVVGGSQGARVLNEAVPEALALL---PE---------ALQVIHQTGKGDL--EE---VRAAY-A-A------- 233 (357)
T ss_pred CCCCeEEEEECCcHhHHHHHHHHHHHHHHh---hh---------CcEEEEEcCCCcH--HH---HHHHh-h-c-------
Confidence 356677778888877776432033444433 21 1456677788752 11 11111 1 1
Q ss_pred CCCCcceEEEEcCCCHHHHhhhccCccccccCCCCCccCCC-cchhHHhhcCceEeeecC
Q 003188 641 EVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASG-TSNMKFSLNGCLIIGTLD 699 (840)
Q Consensus 641 ~~~~~lkVvFl~nYnvslA~~ii~gaDv~l~iS~a~~EAsG-Ts~MKam~NGal~i~tlD 699 (840)
.++ |.+.+|- +--..++++||+....| | ..-+-+|.-|.+.|++..
T Consensus 234 ----~~~-v~~~g~~-~~~~~~~~~~d~~i~~~-------g~~~~~Ea~~~g~Pvv~~~~ 280 (357)
T PRK00726 234 ----GIN-AEVVPFI-DDMAAAYAAADLVICRA-------GASTVAELAAAGLPAILVPL 280 (357)
T ss_pred ----CCc-EEEeehH-hhHHHHHHhCCEEEECC-------CHHHHHHHHHhCCCEEEecC
Confidence 124 4455663 44458889999998633 4 446689999999998854
No 101
>PRK13608 diacylglycerol glucosyltransferase; Provisional
Probab=73.87 E-value=30 Score=39.35 Aligned_cols=43 Identities=14% Similarity=0.118 Sum_probs=30.0
Q ss_pred eEEEEcCCCHHHHhhhccCccccccCCCCCccCCCcchhHHhhcCceEeee
Q 003188 647 KVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGT 697 (840)
Q Consensus 647 kVvFl~nYnvslA~~ii~gaDv~l~iS~a~~EAsGTs~MKam~NGal~i~t 697 (840)
+|.|+ +|-..+ ..++++||+... +|.|++-.=+|..|.+.|.+
T Consensus 257 ~v~~~-G~~~~~-~~~~~~aDl~I~------k~gg~tl~EA~a~G~PvI~~ 299 (391)
T PRK13608 257 NVLIL-GYTKHM-NEWMASSQLMIT------KPGGITISEGLARCIPMIFL 299 (391)
T ss_pred CeEEE-eccchH-HHHHHhhhEEEe------CCchHHHHHHHHhCCCEEEC
Confidence 45443 464344 556799999973 34577777899999988876
No 102
>TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase. RL J Bacteriol 1993 Mar;175(6):1841-3
Probab=73.56 E-value=49 Score=36.03 Aligned_cols=102 Identities=13% Similarity=0.035 Sum_probs=55.5
Q ss_pred CCCCceEeecccchhhhhhhhhhhHHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCc
Q 003188 561 DPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDP 640 (840)
Q Consensus 561 dp~~l~d~~vkR~heYKRq~Lnll~ii~~y~~ik~~~p~~~~~~~p~~~If~GKA~P~y~~aK~iIk~I~~la~~in~d~ 640 (840)
+++.++.+.+-|....|...-.+...+.++. + + .+..++.+|.+.. + .+.+..+. .
T Consensus 176 ~~~~~~i~~~gg~~~~~~~~~~l~~a~~~l~---~--~------~~~~~~~~g~~~~--~-------~l~~~~~~----~ 231 (348)
T TIGR01133 176 REGKPTILVLGGSQGAKILNELVPKALAKLA---E--K------GIQIVHQTGKNDL--E-------KVKNVYQE----L 231 (348)
T ss_pred CCCCeEEEEECCchhHHHHHHHHHHHHHHHh---h--c------CcEEEEECCcchH--H-------HHHHHHhh----C
Confidence 4667778888887777765421334443332 2 0 0223345554421 1 12222221 1
Q ss_pred CCCCcceEEEEcCCCHHHHhhhccCccccccCCCCCccCCC-cchhHHhhcCceEeeecC
Q 003188 641 EVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASG-TSNMKFSLNGCLIIGTLD 699 (840)
Q Consensus 641 ~~~~~lkVvFl~nYnvslA~~ii~gaDv~l~iS~a~~EAsG-Ts~MKam~NGal~i~tlD 699 (840)
...+ +|.|. +. . ...++++||++... || ++-+=+|..|.+.|+|..
T Consensus 232 ~l~~--~v~~~--~~-~-~~~~l~~ad~~v~~-------~g~~~l~Ea~~~g~Pvv~~~~ 278 (348)
T TIGR01133 232 GIEA--IVTFI--DE-N-MAAAYAAADLVISR-------AGASTVAELAAAGVPAILIPY 278 (348)
T ss_pred CceE--EecCc--cc-C-HHHHHHhCCEEEEC-------CChhHHHHHHHcCCCEEEeeC
Confidence 1222 33344 32 2 25789999998853 45 455699999999998844
No 103
>PF13579 Glyco_trans_4_4: Glycosyl transferase 4-like domain; PDB: 3C4Q_B 3C4V_A 3C48_B 1Z2T_A.
Probab=70.02 E-value=2.7 Score=39.40 Aligned_cols=37 Identities=19% Similarity=0.098 Sum_probs=20.8
Q ss_pred CCceEEEeCCCcccccHHHHHHHHHhhcCCChhHHhhhcCccEEEeecCChh
Q 003188 331 PSKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLP 382 (840)
Q Consensus 331 ~~~~viHlNDtHpalaipElmR~l~d~~~l~~~~A~~i~~~~~vfT~HT~~~ 382 (840)
.+|++||+|.++++++ ..++|.. .+..+++|.|+...
T Consensus 72 ~~~Dvv~~~~~~~~~~-~~~~~~~--------------~~~p~v~~~h~~~~ 108 (160)
T PF13579_consen 72 ERPDVVHAHSPTAGLV-AALARRR--------------RGIPLVVTVHGTLF 108 (160)
T ss_dssp ---SEEEEEHHHHHHH-HHHHHHH--------------HT--EEEE-SS-T-
T ss_pred cCCeEEEecccchhHH-HHHHHHc--------------cCCcEEEEECCCch
Confidence 4678999999876654 4555532 23668999997543
No 104
>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase. Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other.
Probab=69.85 E-value=37 Score=37.78 Aligned_cols=110 Identities=14% Similarity=-0.013 Sum_probs=64.3
Q ss_pred ceEeecccch-hhhhhhhhhhHHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcCCC
Q 003188 565 LFDIQVKRIH-EYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVN 643 (840)
Q Consensus 565 l~d~~vkR~h-eYKRq~Lnll~ii~~y~~ik~~~p~~~~~~~p~~~If~GKA~P~y~~aK~iIk~I~~la~~in~d~~~~ 643 (840)
.+.+...|.. ..|+... ++..+.++.+ . .| +.++||.|-+.| ...+. +.+... ..
T Consensus 199 ~vl~~~hr~~~~~k~~~~-ll~a~~~l~~--~-~~-------~~~~vi~~~~~~--~~~~~-------~~~~~~----~~ 254 (365)
T TIGR00236 199 YILLTLHRRENVGEPLEN-IFKAIREIVE--E-FE-------DVQIVYPVHLNP--VVREP-------LHKHLG----DS 254 (365)
T ss_pred EEEEecCchhhhhhHHHH-HHHHHHHHHH--H-CC-------CCEEEEECCCCh--HHHHH-------HHHHhC----CC
Confidence 4555555543 3355555 7776666543 1 11 356887653322 22111 122111 23
Q ss_pred CcceEEEEcCCCHHHHhhhccCccccccCCCCCccCCCcchhHHhhcCceEeeecC-chhHHHHH
Q 003188 644 SYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLD-GANVEIRQ 707 (840)
Q Consensus 644 ~~lkVvFl~nYnvslA~~ii~gaDv~l~iS~a~~EAsGTs~MKam~NGal~i~tlD-GanvEi~~ 707 (840)
+ +|.|+...+..---.++..||+..-+ ||+..+=+|.-|.+.|.+.+ |.+-|+++
T Consensus 255 ~--~v~~~~~~~~~~~~~~l~~ad~vv~~-------Sg~~~~EA~a~g~PvI~~~~~~~~~e~~~ 310 (365)
T TIGR00236 255 K--RVHLIEPLEYLDFLNLAANSHLILTD-------SGGVQEEAPSLGKPVLVLRDTTERPETVE 310 (365)
T ss_pred C--CEEEECCCChHHHHHHHHhCCEEEEC-------ChhHHHHHHHcCCCEEECCCCCCChHHHh
Confidence 4 68888866554445778999998644 47778999999999998755 54556554
No 105
>PLN02605 monogalactosyldiacylglycerol synthase
Probab=67.74 E-value=75 Score=35.86 Aligned_cols=111 Identities=10% Similarity=-0.052 Sum_probs=64.5
Q ss_pred HHhCCCCCCCCceEeecccchhhhhhhhhhhHHHHHHHHHhhcCccccCCCCCe-EEEEEecCCcCCHHHHHHHHHHHHH
Q 003188 554 RVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPR-TIMIGGKAFATYTNAKRIVKLVNDV 632 (840)
Q Consensus 554 ~~~G~~~dp~~l~d~~vkR~heYKRq~Lnll~ii~~y~~ik~~~p~~~~~~~p~-~~If~GKA~P~y~~aK~iIk~I~~l 632 (840)
+++|+ +|+.+++.++.|....|+... ++..+........ . ...+. .++++|+..+.+. .+.+.
T Consensus 198 ~~~gl--~~~~~~il~~Gg~~g~~~~~~-li~~l~~~~~~~~-~-----~~~~~~~~vi~G~~~~~~~-------~L~~~ 261 (382)
T PLN02605 198 RELGM--DEDLPAVLLMGGGEGMGPLEE-TARALGDSLYDKN-L-----GKPIGQVVVICGRNKKLQS-------KLESR 261 (382)
T ss_pred HHcCC--CCCCcEEEEECCCcccccHHH-HHHHHHHhhcccc-c-----cCCCceEEEEECCCHHHHH-------HHHhh
Confidence 46675 477899999999999988766 5554443221000 0 01134 4678887632111 12222
Q ss_pred HhhhcCCcCCCCcceEEEEcCCCHHHHhhhccCccccccCCCCCccCCCcchhHHhhcCceEeeec
Q 003188 633 GEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTL 698 (840)
Q Consensus 633 a~~in~d~~~~~~lkVvFl~nYnvslA~~ii~gaDv~l~iS~a~~EAsGTs~MKam~NGal~i~tl 698 (840)
+ ... +|.|+ +|--.+. .++++||+....| .|++-+-||.-|.+.|+|-
T Consensus 262 ~--------~~~--~v~~~-G~~~~~~-~l~~aaDv~V~~~------g~~ti~EAma~g~PvI~~~ 309 (382)
T PLN02605 262 D--------WKI--PVKVR-GFVTNME-EWMGACDCIITKA------GPGTIAEALIRGLPIILNG 309 (382)
T ss_pred c--------ccC--CeEEE-eccccHH-HHHHhCCEEEECC------CcchHHHHHHcCCCEEEec
Confidence 1 122 34333 3333344 5679999999533 3556689999999999773
No 106
>cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis. It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=60.18 E-value=1.4e+02 Score=32.58 Aligned_cols=46 Identities=11% Similarity=0.048 Sum_probs=31.0
Q ss_pred eEEEEcCCCHHHHhhhccCccccccCCCCCccCCCcchhHHhhcCceEeeecCc
Q 003188 647 KVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDG 700 (840)
Q Consensus 647 kVvFl~nYnvslA~~ii~gaDv~l~iS~a~~EAsGTs~MKam~NGal~i~tlDG 700 (840)
+|.|.. |- +--..++++||+....| | |+.-+-+|..|.+.|++..+
T Consensus 236 ~v~~~g-~~-~~~~~~l~~ad~~v~~s--g----~~t~~Eam~~G~Pvv~~~~~ 281 (350)
T cd03785 236 NYEVFP-FI-DDMAAAYAAADLVISRA--G----ASTVAELAALGLPAILIPLP 281 (350)
T ss_pred CeEEee-hh-hhHHHHHHhcCEEEECC--C----HhHHHHHHHhCCCEEEeecC
Confidence 455554 32 34456779999998533 2 34457999999999987543
No 107
>PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A.
Probab=53.39 E-value=27 Score=33.22 Aligned_cols=40 Identities=28% Similarity=0.379 Sum_probs=24.3
Q ss_pred cccCCcccchhhhhHHHHHhhhhcCccccCCCCCcccccccCcccc
Q 003188 448 VVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPRRW 493 (840)
Q Consensus 448 i~~S~~VNgVS~lH~eilk~~~f~~~~~l~p~k~~~iTNGI~~rrW 493 (840)
...++.+-.||.--.+.+.+ + ++-|+++.=|-|||+..++
T Consensus 137 ~~~~~~ii~vS~~~~~~l~~--~----~~~~~ki~vI~ngid~~~F 176 (177)
T PF13439_consen 137 YKKADRIIAVSESTKDELIK--F----GIPPEKIHVIYNGIDTDRF 176 (177)
T ss_dssp HCCSSEEEESSHHHHHHHHH--H----T--SS-EEE----B-CCCH
T ss_pred HhcCCEEEEECHHHHHHHHH--h----CCcccCCEEEECCccHHHc
Confidence 55788899999988877764 3 3456889999999998654
No 108
>TIGR00215 lpxB lipid-A-disaccharide synthase. Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA
Probab=46.13 E-value=90 Score=35.62 Aligned_cols=114 Identities=13% Similarity=0.079 Sum_probs=65.9
Q ss_pred HHhCCCCCCCCceEee--cccchhh-hhhhhhhhHHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHH
Q 003188 554 RVTGVTIDPNSLFDIQ--VKRIHEY-KRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVN 630 (840)
Q Consensus 554 ~~~G~~~dp~~l~d~~--vkR~heY-KRq~Lnll~ii~~y~~ik~~~p~~~~~~~p~~~If~GKA~P~y~~aK~iIk~I~ 630 (840)
+++|+ +++.+++.. .+|.++- |.... ++..+.++.+ . .| ..++++.+-..++... +.
T Consensus 183 ~~lgl--~~~~~~Ilvl~GSR~aei~k~~~~-ll~a~~~l~~--~-~p-------~~~~vi~~~~~~~~~~-------~~ 242 (385)
T TIGR00215 183 EKLGI--DHNGETLALLPGSRGSEVEKLFPL-FLKAAQLLEQ--Q-EP-------DLRRVLPVVNFKRRLQ-------FE 242 (385)
T ss_pred HHcCC--CCCCCEEEEECCCCHHHHHHhHHH-HHHHHHHHHH--h-CC-------CeEEEEEeCCchhHHH-------HH
Confidence 35565 455555543 4799984 44444 6666555543 2 11 3466655433332221 22
Q ss_pred HHHhhhcCCcCCCCcceEEEEcCCCHHHHhhhccCccccccCCCCCccCCCcchhHHhhcCceEeeecCchhHH
Q 003188 631 DVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVE 704 (840)
Q Consensus 631 ~la~~in~d~~~~~~lkVvFl~nYnvslA~~ii~gaDv~l~iS~a~~EAsGTs~MKam~NGal~i~tlDGanvE 704 (840)
++.+... ... +|.++.+ ++ ..++++||+..-.| ||+-+=+|..|.+.|-+..--++.
T Consensus 243 ~~~~~~~----~~~--~v~~~~~-~~---~~~l~aADl~V~~S-------Gt~tlEa~a~G~P~Vv~yk~~pl~ 299 (385)
T TIGR00215 243 QIKAEYG----PDL--QLHLIDG-DA---RKAMFAADAALLAS-------GTAALEAALIKTPMVVGYRMKPLT 299 (385)
T ss_pred HHHHHhC----CCC--cEEEECc-hH---HHHHHhCCEEeecC-------CHHHHHHHHcCCCEEEEEcCCHHH
Confidence 2222211 122 6766654 33 35889999998666 999999999999999776555443
No 109
>PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=43.19 E-value=1e+02 Score=34.22 Aligned_cols=109 Identities=15% Similarity=0.142 Sum_probs=62.3
Q ss_pred HHhCCCCCCCCceE-e-ecccchhhhhhhhhhhHHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHH
Q 003188 554 RVTGVTIDPNSLFD-I-QVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVND 631 (840)
Q Consensus 554 ~~~G~~~dp~~l~d-~-~vkR~heYKRq~Lnll~ii~~y~~ik~~~p~~~~~~~p~~~If~GKA~P~y~~aK~iIk~I~~ 631 (840)
+++|++ ++.++. + --+|..+.|+..-.++..+..+.+ . . ...++|+.|- +|.+.. ++.+++..
T Consensus 178 ~~l~~~--~~~~~il~~~gsr~~~~~~~~~~l~~a~~~l~~--~-~-------~~~~~ii~~~-~~~~~~--~~~~~~~~ 242 (380)
T PRK00025 178 ARLGLD--PDARVLALLPGSRGQEIKRLLPPFLKAAQLLQQ--R-Y-------PDLRFVLPLV-NPKRRE--QIEEALAE 242 (380)
T ss_pred HHcCCC--CCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHH--h-C-------CCeEEEEecC-ChhhHH--HHHHHHhh
Confidence 356654 444432 2 346888877643325566655533 1 1 1367888763 343332 12222211
Q ss_pred HHhhhcCCcCCCCcceEEEEcCCCHHHHhhhccCccccccCCCCCccCCCcchhHHhhcCceEeeecC
Q 003188 632 VGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLD 699 (840)
Q Consensus 632 la~~in~d~~~~~~lkVvFl~nYnvslA~~ii~gaDv~l~iS~a~~EAsGTs~MKam~NGal~i~tlD 699 (840)
. . .+.|.+..+ . ...++++||+...+ |||+.+=+|..|.+.|.+..
T Consensus 243 ~----------~-~~~v~~~~~---~-~~~~~~~aDl~v~~-------sG~~~lEa~a~G~PvI~~~~ 288 (380)
T PRK00025 243 Y----------A-GLEVTLLDG---Q-KREAMAAADAALAA-------SGTVTLELALLKVPMVVGYK 288 (380)
T ss_pred c----------C-CCCeEEEcc---c-HHHHHHhCCEEEEC-------ccHHHHHHHHhCCCEEEEEc
Confidence 1 0 123545443 2 35678999999974 59999999999999997744
No 110
>cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=34.31 E-value=70 Score=31.45 Aligned_cols=46 Identities=17% Similarity=0.047 Sum_probs=34.0
Q ss_pred CCceEEEeCCCcccccHHHHHHHHHhhcCCChhHHhhhcCccEEEeecCChhhhHhhccH
Q 003188 331 PSKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEALEKWSQ 390 (840)
Q Consensus 331 ~~~~viHlNDtHpalaipElmR~l~d~~~l~~~~A~~i~~~~~vfT~HT~~~eglE~w~~ 390 (840)
.+|++||+|++.++...+ +++. ......+++|.|++.++-...+..
T Consensus 50 ~~~D~i~~~~~~~~~~~~-~~~~-------------~~~~~~~i~~~h~~~~~~~~~~~~ 95 (229)
T cd01635 50 FKPDVVHAHGYYPAPLAL-LLAA-------------RLLGIPLVLTVHGVNRSLLEGVPL 95 (229)
T ss_pred cCCCEEEEcCCCcHHHHH-HHHH-------------hhCCCCEEEEEcCccHhhcccCcH
Confidence 478899999999998754 1111 124567999999999998766654
No 111
>PF13477 Glyco_trans_4_2: Glycosyl transferase 4-like
Probab=33.65 E-value=49 Score=31.09 Aligned_cols=36 Identities=19% Similarity=0.220 Sum_probs=24.2
Q ss_pred CCceEEEeCCCcccccHHHHHHHHHhhcCCChhHHhhhcC-ccEEEeecCC
Q 003188 331 PSKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITT-RTVAYTNHTV 380 (840)
Q Consensus 331 ~~~~viHlNDtHpalaipElmR~l~d~~~l~~~~A~~i~~-~~~vfT~HT~ 380 (840)
.+||+||+|...|...+.-+++.+ .+ ..+++|.|..
T Consensus 73 ~~~DvIh~h~~~~~~~~~~l~~~~--------------~~~~~~i~~~hg~ 109 (139)
T PF13477_consen 73 EKPDVIHCHTPSPYGLFAMLAKKL--------------LKNKKVIYTVHGS 109 (139)
T ss_pred CCCCEEEEecCChHHHHHHHHHHH--------------cCCCCEEEEecCC
Confidence 358899999999853334444332 33 5789999954
No 112
>PF13524 Glyco_trans_1_2: Glycosyl transferases group 1
Probab=32.71 E-value=1.1e+02 Score=27.04 Aligned_cols=75 Identities=7% Similarity=0.098 Sum_probs=47.2
Q ss_pred HHHHHHhcCC--CCCCChHHHHHHHhhCCCCCCCccccccCChHHHHHHHHHHHHHhcCHHHHHHHHHHHhccC-CCCCh
Q 003188 744 EAKQFIRSGA--FGSYDYNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYKDQKKWLKMSILSTAGS-GKFSS 820 (840)
Q Consensus 744 ~v~~~~~~G~--f~~~~~~~l~~~L~~~~~~~~~D~~~~~~Df~~y~~~~~~~~~~Y~d~~~W~~~~~~n~a~~-g~FSs 820 (840)
++++.+..|. +++.. .. +..+... +..++... +.-++.+++..+..|++.+.++...+-... ..|+|
T Consensus 14 r~~E~~a~G~~vi~~~~-~~-~~~~~~~-----~~~~~~~~---~~~el~~~i~~ll~~~~~~~~ia~~a~~~v~~~~t~ 83 (92)
T PF13524_consen 14 RIFEAMACGTPVISDDS-PG-LREIFED-----GEHIITYN---DPEELAEKIEYLLENPEERRRIAKNARERVLKRHTW 83 (92)
T ss_pred HHHHHHHCCCeEEECCh-HH-HHHHcCC-----CCeEEEEC---CHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHhCCH
Confidence 5677888884 33322 22 2223322 23455555 444455566666679999999988886664 48999
Q ss_pred HHHHHHHH
Q 003188 821 DRTIAQYA 828 (840)
Q Consensus 821 Drti~eYa 828 (840)
+..+++..
T Consensus 84 ~~~~~~il 91 (92)
T PF13524_consen 84 EHRAEQIL 91 (92)
T ss_pred HHHHHHHH
Confidence 99988764
No 113
>cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc). The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st
Probab=32.44 E-value=2.1e+02 Score=31.35 Aligned_cols=109 Identities=16% Similarity=0.176 Sum_probs=59.4
Q ss_pred HhCCCCCCCCceEeecccchh---hhhhhhhhhHHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHH
Q 003188 555 VTGVTIDPNSLFDIQVKRIHE---YKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVND 631 (840)
Q Consensus 555 ~~G~~~dp~~l~d~~vkR~he---YKRq~Lnll~ii~~y~~ik~~~p~~~~~~~p~~~If~GKA~P~y~~aK~iIk~I~~ 631 (840)
..|++ ++..+.++..|... .|+... ++..+.++ .. . .+++|+.| +|.... .+.+.+.+
T Consensus 192 ~~~~~--~~~~vlv~~~r~~~~~~~k~~~~-l~~al~~l---~~-------~--~~~vi~~~--~~~~~~--~l~~~~~~ 252 (363)
T cd03786 192 LLGLL--PKKYILVTLHRVENVDDGEQLEE-ILEALAEL---AE-------E--DVPVVFPN--HPRTRP--RIREAGLE 252 (363)
T ss_pred hcccC--CCCEEEEEeCCccccCChHHHHH-HHHHHHHH---Hh-------c--CCEEEEEC--CCChHH--HHHHHHHh
Confidence 44543 45566777777764 677776 77766544 22 0 25666654 333322 22222222
Q ss_pred HHhhhcCCcCCCCcceEEEEcCCCHHHHhhhccCccccccCCCCCccCCCcchhHHhhcCceEeeec
Q 003188 632 VGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTL 698 (840)
Q Consensus 632 la~~in~d~~~~~~lkVvFl~nYnvslA~~ii~gaDv~l~iS~a~~EAsGTs~MKam~NGal~i~tl 698 (840)
+.. ..+ +|.|+.--...--..++.+||+..-+|- |+ ..-+|..|.+.|.+-
T Consensus 253 ~~~-------~~~--~v~~~~~~~~~~~~~l~~~ad~~v~~Sg------gi-~~Ea~~~g~PvI~~~ 303 (363)
T cd03786 253 FLG-------HHP--NVLLISPLGYLYFLLLLKNADLVLTDSG------GI-QEEASFLGVPVLNLR 303 (363)
T ss_pred hcc-------CCC--CEEEECCcCHHHHHHHHHcCcEEEEcCc------cH-HhhhhhcCCCEEeeC
Confidence 210 023 4666632122334566899999997762 33 566777788888663
No 114
>TIGR02919 accessory Sec system glycosyltransferase GtfB. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus.
Probab=31.26 E-value=1.1e+02 Score=36.02 Aligned_cols=49 Identities=16% Similarity=0.116 Sum_probs=45.3
Q ss_pred eEEEEcCCCHHHHhhhccCccccccCCCCCccCCCcchhHHhhcCceEeee
Q 003188 647 KVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGT 697 (840)
Q Consensus 647 kVvFl~nYnvslA~~ii~gaDv~l~iS~a~~EAsGTs~MKam~NGal~i~t 697 (840)
.|+..++|.....+.++.-||+.+-||. .|.=|.+-|.|+-+|-+.||-
T Consensus 329 nvvly~~~~~~~l~~ly~~~dlyLdin~--~e~~~~al~eA~~~G~pI~af 377 (438)
T TIGR02919 329 NVKLYPNITTQKIQELYQTCDIYLDINH--GNEILNAVRRAFEYNLLILGF 377 (438)
T ss_pred CcEEECCcChHHHHHHHHhccEEEEccc--cccHHHHHHHHHHcCCcEEEE
Confidence 5999999999778899999999999999 999999999999999988844
No 115
>PF14407 Frankia_peptide: Ribosomally synthesized peptide prototyped by Frankia Franean1_4349.
Probab=28.14 E-value=16 Score=31.41 Aligned_cols=42 Identities=21% Similarity=0.199 Sum_probs=35.3
Q ss_pred ehhccccchhHHhhccChHHHHHHHHHhcCCChHHHHhhccc
Q 003188 92 MEFLQGRTLTNAIGSLDIQNAYADALNNLGHVLEEIAEQEKD 133 (840)
Q Consensus 92 mEfl~Gr~L~nnl~NLg~~~~~~eaL~~lg~~~~~l~~~E~d 133 (840)
||.+|||.+...=....+...-.++.++.+++.++|...|.+
T Consensus 2 ~e~lIgrAv~D~~FRqqllad~~~A~~~Y~Lt~eeL~al~~~ 43 (61)
T PF14407_consen 2 VERLIGRAVTDEAFRQQLLADPEEACKEYDLTPEELQALERL 43 (61)
T ss_pred HHHHHHHHHcCHHHHHHHhcCHHHHHhhCCCCHHHHHHHHHH
Confidence 789999999877776666777788999999999999999853
No 116
>PF00814 Peptidase_M22: Glycoprotease family; InterPro: IPR000905 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of metallopeptidases belong to MEROPS peptidase family M22 (clan MK). The type example being O-sialoglycoprotein endopeptidase (3.4.24.57 from EC) from Pasteurella haemolytica (Mannheimia haemolytica). O-Sialoglycoprotein endopeptidase is secreted by the bacterium P. haemolytica, and digests only proteins that are heavily sialylated, in particular those with sialylated serine and threonine residues []. Substrate proteins include glycophorin A and leukocyte surface antigens CD34, CD43, CD44 and CD45 [, ]. Removal of glycosylation, by treatment with neuraminidase, completely negates susceptibility to O-sialoglycoprotein endopeptidase digestion [, ]. Sequence similarity searches have revealed other members of the M22 family, from yeast, Mycobacterium, Haemophilus influenzae and the cyanobacterium Synechocystis []. The zinc-binding and catalytic residues of this family have not been determined, although the motif HMEGH may be a zinc-binding region [].; GO: 0004222 metalloendopeptidase activity, 0006508 proteolysis; PDB: 2A6A_A 2GEL_G 2GEM_B 1OKJ_B 3ENO_A 3EN9_B 2VWB_B 3ENH_B 2IVO_D 2IVP_A ....
Probab=22.94 E-value=44 Score=36.43 Aligned_cols=54 Identities=24% Similarity=0.347 Sum_probs=39.1
Q ss_pred hHHHHHHHHHhcCCChHHHHhhcc--ccCCCCCCcccchhhhHhhhh-ccCCCeEEEee
Q 003188 109 IQNAYADALNNLGHVLEEIAEQEK--DAALGNGGLGRLASCFLDSMA-TLNLPAWGYGL 164 (840)
Q Consensus 109 ~~~~~~eaL~~lg~~~~~l~~~E~--d~~LgnGGLGrLAac~ldS~a-~l~~p~~G~Gl 164 (840)
|...++++|++.|++++||-..=- =||++ +|| |.+..+.+.+| .+++|++|+.=
T Consensus 33 L~~~i~~~l~~~~~~~~did~iavt~GPGsf-tgL-rvG~~~Ak~La~~~~~Pli~v~~ 89 (268)
T PF00814_consen 33 LPPLIEELLKEAGISLSDIDAIAVTRGPGSF-TGL-RVGLSFAKGLALALNIPLIGVSH 89 (268)
T ss_dssp HHHHHHHHHHHHTS-GGGESEEEEEEESS-H-HHH-HHHHHHHHHHHHHTT--EEEEEH
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEecCCCcc-ccc-HHHHHHHHHHHHHhCCCeEeecc
Confidence 567799999999999998765533 34554 477 88889999988 49999999863
No 117
>KOG2387 consensus CTP synthase (UTP-ammonia lyase) [Nucleotide transport and metabolism]
Probab=22.43 E-value=1.4e+03 Score=27.45 Aligned_cols=187 Identities=15% Similarity=0.213 Sum_probs=116.9
Q ss_pred ccCcccccccCChhhhHHHHhhcCccccccChhhHhhhhccCCCHHHHHHHHHHH-HHHHHHHHHHHHHHhCCCCCCCCc
Q 003188 487 GITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLLVGLRQFADNTELQAEWESAK-MASKKHLADYIWRVTGVTIDPNSL 565 (840)
Q Consensus 487 GI~~rrWl~~~NP~l~~li~~~~g~~~w~~~~~~l~~l~~~~~d~~~~~~~~~~K-~~nK~~L~~~i~~~~G~~~dp~~l 565 (840)
|++|.-=...|..++..-..+.|+. --.-.+++.-.+... ++ . | .+- .-.++.+++|+.+++++.....
T Consensus 208 GL~Pd~iaCRs~~~l~~~vk~Kis~-FChV~~eqV~~~hDv-~s--i---y-hvPllL~~q~~~e~l~~~L~L~~~~~-- 277 (585)
T KOG2387|consen 208 GLSPDLIACRSTKPLEMSVKEKISM-FCHVGPEQVVGLHDV-SS--I---Y-HVPLLLEEQGIVEYLNRRLGLSIISS-- 277 (585)
T ss_pred CCCcceEEEccCCCCCHHHHHHHhh-hcccCHHHeeeeccC-cc--h---h-cchHHHhhhhHHHHHHHHhCCCcccc--
Confidence 4444444444555565555555552 111233333223221 11 1 3 233 3445668889989988764321
Q ss_pred eEeecccchhhhhhhhhhhHHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcCCCCc
Q 003188 566 FDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSY 645 (840)
Q Consensus 566 ~d~~vkR~heYKRq~Lnll~ii~~y~~ik~~~p~~~~~~~p~~~If~GKA~P~y~~aK~iIk~I~~la~~in~d~~~~~~ 645 (840)
.|..|+....+.+... + -..|+.+-.-||=.+--..--.++|-+..-|-. ++.|
T Consensus 278 -----------~~~~l~~W~~~~~~~d----~-----~~~~V~IalVGKYt~l~DsY~Sv~KAL~Ha~~~------~~~k 331 (585)
T KOG2387|consen 278 -----------ERPMLDKWSNMAERYD----D-----LQVPVRIALVGKYTKLSDSYLSVVKALEHAALA------INRK 331 (585)
T ss_pred -----------chhhHHHHHHHHHhhh----c-----ccCcEEEEEEeccccchHHHHHHHHHHHHHHHH------hccc
Confidence 2244444433333222 1 235899999999877666656777777766654 5678
Q ss_pred ceEEEEcCCCH------------HHHhhhccCccccccCCCCCccCCCcchhHHhh-----cCceEeeecCc---hhHHH
Q 003188 646 LKVVFVPNYNV------------SVAELLIPGSELSQHISTAGMEASGTSNMKFSL-----NGCLIIGTLDG---ANVEI 705 (840)
Q Consensus 646 lkVvFl~nYnv------------slA~~ii~gaDv~l~iS~a~~EAsGTs~MKam~-----NGal~i~tlDG---anvEi 705 (840)
|.|.+++.=+. .-|=.++.+||=.+-|-- |-.-|+.+|..+. |+.+-+|..=| |.||.
T Consensus 332 l~i~wi~s~dLE~~t~~e~~~~~~~aW~~l~~adGilvPGG--FG~RGveG~i~Aak~ARen~iP~LGiCLGmQ~AvIEf 409 (585)
T KOG2387|consen 332 LEIVWIDSSDLEPETEQEDPRKYHAAWQKLKSADGILVPGG--FGDRGVEGKILAAKWARENKIPFLGICLGMQLAVIEF 409 (585)
T ss_pred ceEEEEehhcccccccccChhHHHHHHHHhccCCeEEeCCc--ccccchhHHHHHHHHHHhcCCCeEeeehhhhHHHHHH
Confidence 89999977443 345677888999888865 8899999998664 89999998877 57899
Q ss_pred HHHhcC
Q 003188 706 RQEIGE 711 (840)
Q Consensus 706 ~~~vG~ 711 (840)
++.+=+
T Consensus 410 aRnvLg 415 (585)
T KOG2387|consen 410 ARNVLG 415 (585)
T ss_pred HHHhhC
Confidence 988744
No 118
>KOG1387 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=21.68 E-value=1e+03 Score=27.83 Aligned_cols=85 Identities=20% Similarity=0.221 Sum_probs=63.1
Q ss_pred CCCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcCCCCcceEEEEcCCCHHHHhhhccCccccccCCCCCccCCCc
Q 003188 603 KTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGT 682 (840)
Q Consensus 603 ~~~p~~~If~GKA~P~y~~aK~iIk~I~~la~~in~d~~~~~~lkVvFl~nYnvslA~~ii~gaDv~l~iS~a~~EAsGT 682 (840)
...|+-++++|.---... .+-.|.+.++|+.++ +++ +|.|.-|---..-..++.-|-+..+.=- -|-=|.
T Consensus 302 ~~~~iKL~ivGScRneeD--~ervk~Lkd~a~~L~----i~~--~v~F~~N~Py~~lv~lL~~a~iGvh~Mw--NEHFGI 371 (465)
T KOG1387|consen 302 SVSPIKLIIVGSCRNEED--EERVKSLKDLAEELK----IPK--HVQFEKNVPYEKLVELLGKATIGVHTMW--NEHFGI 371 (465)
T ss_pred ccCCceEEEEeccCChhh--HHHHHHHHHHHHhcC----Ccc--ceEEEecCCHHHHHHHhccceeehhhhh--hhhcch
Confidence 456888999986533222 234678888998875 888 7999888666666666666666666655 788899
Q ss_pred chhHHhhcCceEeee
Q 003188 683 SNMKFSLNGCLIIGT 697 (840)
Q Consensus 683 s~MKam~NGal~i~t 697 (840)
|=.-.|.-|.+||+-
T Consensus 372 sVVEyMAAGlIpi~h 386 (465)
T KOG1387|consen 372 SVVEYMAAGLIPIVH 386 (465)
T ss_pred hHHHHHhcCceEEEe
Confidence 999999999999944
No 119
>TIGR02672 cas_csm6 CRISPR-associated protein, Csm6 family. Members of this family as found in CRISPR-associated (cas) gene regions in Streptococcus thermophilus CNRZ1066, Staphylococcus epidermidis RP62A, and Mycobacterium tuberculosis (strains CDC1551 and H37Rv), as part of Mtube-type CRISPR/Cas systems. CRISPR is a widespread form of direct repeat found in archaea and bacteria, with distinctive subtypes each of which has a characteristic sporadic distribution.
Probab=20.70 E-value=49 Score=37.73 Aligned_cols=33 Identities=30% Similarity=0.355 Sum_probs=25.7
Q ss_pred ccCccccccCCCCCccCCCcchhHHhhc----------CceEeeecCch
Q 003188 663 IPGSELSQHISTAGMEASGTSNMKFSLN----------GCLIIGTLDGA 701 (840)
Q Consensus 663 i~gaDv~l~iS~a~~EAsGTs~MKam~N----------Gal~i~tlDGa 701 (840)
.|.+++.+|.| |||.|||++|- =++.|+|-.|+
T Consensus 41 ~~d~EilLNlS------SGTPQMKSaL~~i~~~~~~~~k~IQV~TP~~~ 83 (362)
T TIGR02672 41 YPDREIILNTS------SGTPQMQSALVAINVFGIPNTKAVQVSTPARA 83 (362)
T ss_pred CCCCeEEEECC------CCcHHHHHHHHHHHhccccCceEEEeeCCCCc
Confidence 59999999987 79999999863 24556666665
No 120
>PF09659 Cas_Csm6: CRISPR-associated protein (Cas_Csm6)
Probab=20.55 E-value=46 Score=38.38 Aligned_cols=21 Identities=43% Similarity=0.613 Sum_probs=18.9
Q ss_pred ccCccccccCCCCCccCCCcchhHHhh
Q 003188 663 IPGSELSQHISTAGMEASGTSNMKFSL 689 (840)
Q Consensus 663 i~gaDv~l~iS~a~~EAsGTs~MKam~ 689 (840)
.|.+++.+|+| |||.|||.+|
T Consensus 38 ~~d~eilLNlS------SGTPqmks~L 58 (382)
T PF09659_consen 38 YPDDEILLNLS------SGTPQMKSAL 58 (382)
T ss_pred CCCCeEEEeCC------CCHHHHHHHH
Confidence 39999999998 7999999886
Done!