Query 003188
Match_columns 840
No_of_seqs 262 out of 1461
Neff 5.5
Searched_HMMs 29240
Date Mon Mar 25 16:28:36 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/003188.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/003188hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1ygp_A Yeast glycogen phosphor 100.0 5E-245 2E-249 2122.5 59.9 801 27-838 39-879 (879)
2 2gj4_A Glycogen phosphorylase, 100.0 2E-232 6E-237 2029.6 70.6 809 17-839 1-821 (824)
3 1l5w_A Maltodextrin phosphoryl 100.0 2E-231 6E-236 2015.4 61.6 788 25-836 3-796 (796)
4 2c4m_A Glycogen phosphorylase; 100.0 4E-228 2E-232 1986.6 63.2 783 27-839 4-793 (796)
5 3vue_A GBSS-I, granule-bound s 100.0 2.3E-41 8E-46 390.9 24.0 474 138-830 25-507 (536)
6 3nb0_A Glycogen [starch] synth 99.9 9.3E-23 3.2E-27 238.7 24.3 364 300-829 160-628 (725)
7 2qzs_A Glycogen synthase; glyc 99.7 4.9E-17 1.7E-21 181.9 17.2 339 331-831 128-473 (485)
8 1rzu_A Glycogen synthase 1; gl 99.7 2.4E-17 8.4E-22 184.3 14.4 333 331-831 129-472 (485)
9 3fro_A GLGA glycogen synthase; 99.5 4.8E-13 1.6E-17 145.6 20.6 307 331-834 121-430 (439)
10 3s28_A Sucrose synthase 1; gly 99.3 4.2E-12 1.4E-16 153.4 15.1 192 555-829 563-764 (816)
11 2r60_A Glycosyl transferase, g 99.1 1.4E-09 4.8E-14 122.3 16.8 195 445-707 185-398 (499)
12 3c48_A Predicted glycosyltrans 99.1 2.5E-09 8.6E-14 117.2 17.1 184 447-706 181-364 (438)
13 1uqt_A Alpha, alpha-trehalose- 99.0 2.7E-09 9.4E-14 122.0 13.9 121 563-692 254-376 (482)
14 3okp_A GDP-mannose-dependent a 99.0 1.2E-08 4.2E-13 109.3 17.6 235 449-834 139-379 (394)
15 2jjm_A Glycosyl transferase, g 98.9 4.4E-09 1.5E-13 114.1 13.6 232 445-832 151-383 (394)
16 2x6q_A Trehalose-synthase TRET 98.6 2.4E-07 8.1E-12 101.2 14.9 139 554-718 223-364 (416)
17 3oy2_A Glycosyltransferase B73 98.6 2.8E-07 9.6E-12 100.3 13.1 247 448-832 129-388 (413)
18 2iw1_A Lipopolysaccharide core 98.6 5.8E-07 2E-11 95.7 15.3 183 450-717 136-318 (374)
19 2gek_A Phosphatidylinositol ma 98.6 1.2E-06 4.1E-11 94.4 17.7 174 563-832 207-381 (406)
20 3qhp_A Type 1 capsular polysac 98.2 4.5E-06 1.5E-10 79.4 10.1 104 565-699 3-107 (166)
21 3t5t_A Putative glycosyltransf 98.2 0.00012 4.1E-09 84.1 23.3 126 563-702 280-410 (496)
22 2f9f_A First mannosyl transfer 98.1 4.5E-06 1.6E-10 81.2 8.5 130 557-717 16-145 (177)
23 2bfw_A GLGA glycogen synthase; 98.1 7.3E-06 2.5E-10 80.2 9.6 130 554-717 29-162 (200)
24 2iuy_A Avigt4, glycosyltransfe 97.9 2.3E-05 7.8E-10 83.1 9.0 114 563-708 161-282 (342)
25 2vsy_A XCC0866; transferase, g 97.4 0.002 6.7E-08 73.3 16.6 111 555-696 370-481 (568)
26 1vgv_A UDP-N-acetylglucosamine 97.1 0.0052 1.8E-07 65.7 14.3 117 565-718 207-326 (384)
27 2x0d_A WSAF; GT4 family, trans 97.1 0.00087 3E-08 74.6 8.2 105 563-698 240-345 (413)
28 3beo_A UDP-N-acetylglucosamine 97.0 0.0049 1.7E-07 65.5 12.7 111 563-706 205-317 (375)
29 2hy7_A Glucuronosyltransferase 96.5 0.018 6E-07 63.5 13.1 92 565-697 223-321 (406)
30 1f0k_A MURG, UDP-N-acetylgluco 96.2 0.012 4E-07 62.5 9.0 101 562-700 181-283 (364)
31 1v4v_A UDP-N-acetylglucosamine 93.7 0.66 2.3E-05 49.3 13.8 109 563-705 198-308 (376)
32 3q3e_A HMW1C-like glycosyltran 63.5 22 0.00074 42.0 9.8 115 557-702 434-551 (631)
33 2xci_A KDO-transferase, 3-deox 62.3 18 0.00061 39.0 8.4 121 566-708 198-320 (374)
34 3dzc_A UDP-N-acetylglucosamine 52.8 1E+02 0.0034 33.5 12.4 119 553-707 220-343 (396)
35 3ot5_A UDP-N-acetylglucosamine 50.5 60 0.0021 35.4 10.2 120 564-719 225-346 (403)
36 4hwg_A UDP-N-acetylglucosamine 36.9 79 0.0027 34.4 8.3 133 554-724 196-332 (385)
37 3u7q_B Nitrogenase molybdenum- 28.6 2.2E+02 0.0076 32.5 10.5 135 15-163 308-470 (523)
38 3otg_A CALG1; calicheamicin, T 22.7 6.6E+02 0.023 26.1 13.3 43 647-699 293-336 (412)
39 2c4m_A Glycogen phosphorylase; 20.1 21 0.00073 43.1 -0.1 33 793-828 681-713 (796)
No 1
>1ygp_A Yeast glycogen phosphorylase; phosphorylated form, glycosyltransferase; HET: PLP; 2.80A {Saccharomyces cerevisiae} SCOP: c.87.1.4
Probab=100.00 E-value=4.6e-245 Score=2122.54 Aligned_cols=801 Identities=48% Similarity=0.831 Sum_probs=765.5
Q ss_pred CCHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCceEEEEEehhccccchhHHhhc
Q 003188 27 NEPSAIASNISYHVQYSPHFSPTKFEPEQAFFATAESVRDRLIQQWNETYHHFNKVDPKQTYYLSMEFLQGRTLTNAIGS 106 (840)
Q Consensus 27 ~~~~~~~~~~~~~l~~~~g~~~~~at~~~~y~ala~~vrd~l~~~w~~t~~~~~~~~~k~vyYlSmEfl~Gr~L~nnl~N 106 (840)
+++++|+++|.+||++++|+++.+||..++|.|||.+|||+|+++|.+|++.+.+.+.|+||||||||||||+|.|||+|
T Consensus 39 ~~~~~~~~~~~~~l~~~~~~~~~~a~~~~~y~al~~~vrd~l~~~W~~t~~~~~~~~~k~vyYlS~EFL~Gr~L~n~l~n 118 (879)
T 1ygp_A 39 NKAEDFQDRFIDHVETTLARSLYNCDDMVAYEAASMSIRDNLVIDWNKTQQKFTTRDPKRVYYLSLEFLMGRALDNALIN 118 (879)
T ss_dssp CSHHHHHHHHHHHHHTTSCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECSCCCCBCHHHHHHHS
T ss_pred cCHHHHHHHHHHHHHHHhCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCeEEEEchhhhhhhHHHHHHHh
Confidence 77789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cChHHHH-------------HHHHHhcCCChHHHHhhccccCCCCCCcccchhhhHhhhhccCCCeEEEeeccCCccceE
Q 003188 107 LDIQNAY-------------ADALNNLGHVLEEIAEQEKDAALGNGGLGRLASCFLDSMATLNLPAWGYGLRYRYGLFKQ 173 (840)
Q Consensus 107 Lg~~~~~-------------~eaL~~lg~~~~~l~~~E~d~~LgnGGLGrLAac~ldS~a~l~~p~~G~GlrY~~G~F~Q 173 (840)
||+++.+ ++||++||+|+++|+++|+||||||||||||||||||||||||+|++||||||+||||+|
T Consensus 119 lg~~~~~~~~~~~~~~~~~~~~al~~lg~~l~~~~~~E~da~LGnGGLGrLAacfLdS~AtLglP~~GyGlrY~~G~F~Q 198 (879)
T 1ygp_A 119 MKIEDPEDPAASKGKPREMIKGALDELGFKLEDVLDQEPDAGLGNGGLGRLAACFVDSMATEGIPAWGYGLRYEYGIFAQ 198 (879)
T ss_dssp CCC------------CHHHHHHHHHHHTCCHHHHHTTCCCBCSCCSHHHHHHHHHHHHHHHTTCCEEEEEECCSSCSCEE
T ss_pred cCChhhhchhhccccchhHHHHHHHHcCCCHHHHHhcCCCCCcCCCcHHHHHHHHHHHHHhCCCCeEEEEeeecCCceEE
Confidence 9999999 999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeeCCceeeccccccccCCCcccccCCeeEEEEECCeEEE--cC-CCce--eeeCCeEEEEEEeeeccCCCCCCceEEEE
Q 003188 174 KITKQGQEEVAEDWLEKFSPWEVVRHDVVFPVRFFGSVMV--NP-NGTR--KWVGGEVVQAVAYDIPIPGYKTKNTISLR 248 (840)
Q Consensus 174 ~i~dG~Q~E~pd~Wl~~~~pwe~~r~~~~~~V~f~g~~~~--~~-~g~~--~w~~~~~v~av~yd~pi~gy~~~~~~~lr 248 (840)
+|.||||+|.||+||.+|||||++|++.+++|+|+|+|+. +. +|+. +|++++.|+|||||+|||||+|+++|+||
T Consensus 199 ~i~dG~Q~E~pd~Wl~~g~pwe~~r~~~~~~V~f~G~v~~~~~~~~G~~~~~w~~~~~v~av~yD~Pi~Gy~~~~~n~lR 278 (879)
T 1ygp_A 199 KIIDGYQVETPDYWLNSGNPWEIERNEVQIPVTFYGYVDRPEGGKTTLSASQWIGGERVLAVAYDFPVPGFKTSNVNNLR 278 (879)
T ss_dssp EEETTEEEEECCCTTTTCCTTCEEEEEEEEEEEESCEEECC----CTTSCCEEECSEEEEEEEEEEEEECSSCCCEEEEE
T ss_pred EeeCCeeEEeccchhccCCcccccCCCceEEEeeCCEEeeccccCCCcceeEeeCCcEEEEEEccccccCcCCCceEEEE
Confidence 9999999999999999999999999999999999999983 23 6754 49999999999999999999999999999
Q ss_pred EEEEEcCCCCccccccCcchhhhhHhhhhhhccccccccCCCCchhhhhhhhhhhhHHHHhHHHHHHHHHHHcccCcccc
Q 003188 249 LWDAKASAEDFNLFQFNDGQYESAAQLHSRAQQICAVLYPGDSTEEGKLLRLKQQFFLCSASLQDMILRFKERKSGRQWS 328 (840)
Q Consensus 249 Lw~a~v~~~~~~l~~~~~~~y~~a~~~~~~~~~It~~LYp~D~~~~Gk~lRL~Qeyfl~~a~lqdiir~~~~~~g~~~l~ 328 (840)
||+|+++ ..|+|..|+.|+|.+|+++++.+|+||++|||+|++++||+|||+||||||+||+|||||+|++.++ +|+
T Consensus 279 LW~a~~~-~~f~l~~fn~gdy~~a~~~~~~~e~IT~vLYp~D~~~~GkeLRLkQEyfl~sa~lqdilr~~~~~~~--~l~ 355 (879)
T 1ygp_A 279 LWQARPT-TEFDLNKFNNGDYKNSVAQQQRAESITAVLYPNDNFAQGKELRLKQQYFWCAASLHDILRRFKKSKR--PWT 355 (879)
T ss_dssp EEEEEES-CSCCHHHHHTTCHHHHTHHHHHHHHHHHSSSCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC--CGG
T ss_pred EEEeccC-cccchhhccCccHhHhhhChHhhhchhccCCCCCCCccchhhheehhhhhhhhHHHHHHHHHHHhCC--Chh
Confidence 9999965 4899999999999999999999999999999999999999999999999999999999999999884 699
Q ss_pred cCCCceEEEeCCCcccccHHHHHHHHHhhcCCChhHHhhhcCccEEEeecCChhhhHhhccHHHHHhhchhHHHHHHHHH
Q 003188 329 EFPSKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEALEKWSQAVMWKLLPRHMEIIEEID 408 (840)
Q Consensus 329 ~l~~~~viHlNDtHpalaipElmR~l~d~~~l~~~~A~~i~~~~~vfT~HT~~~eglE~w~~~l~~~lLPr~~~ii~~in 408 (840)
+|+++++||||||||||+||||||+|+|++|++|++||++|+++|+||||||+|||||+||++||+++||||++||++||
T Consensus 356 ~l~~~~~ihlNDtHpalai~ELmR~L~d~~gl~wd~Aw~iv~~t~~yTnHT~lpealE~wpv~l~~~lLpr~~~II~ein 435 (879)
T 1ygp_A 356 EFPDQVAIQLNDTHPTLAIVELQRVLVDLEKLDWHEAWDIVTKTFAYTNHTVMQEALEKWPRRLFGHLLPRHLEIIYDIN 435 (879)
T ss_dssp GHHHHEEEEEESSTTTHHHHHHHHHHHHTTCCCHHHHHHHHHHHEEEEECCCSGGGSCEEEHHHHHHHCHHHHHHHHHHH
T ss_pred hcCCceEEEccCCcHHHHHHHHHHHHhhhcCCCHHHHHHHHHHheeeecCcCchHhhccCCHHHHHHHCCcHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCCcccccccccccCCCCCC--cccccccccccCCcccchhhhhHHHHHhhhhcCccccCCC-CCcccc
Q 003188 409 KRFIAMVRSTRSDLESKIPSMCILDNNPKKP--VVRMANLCVVSAHTVNGVAQLHSDILKADLFADYVSLWPN-KLQNKT 485 (840)
Q Consensus 409 ~~f~~~~~~~~~~~~~~~~~~~iie~~~~~~--~v~Ma~lai~~S~~VNgVS~lH~eilk~~~f~~~~~l~p~-k~~~iT 485 (840)
++|+++++.++|.+.+++.+||+|++ +++ +||||+|||++||+|||||+||++++|+.+|++|+++||+ ||+|||
T Consensus 436 ~~f~~~~~~~~~~d~~~~~~l~ii~~--~~~~~~v~MA~LAi~~S~~vNGVs~LH~ev~k~~~f~df~~l~P~~kf~n~T 513 (879)
T 1ygp_A 436 WFFLEDVAKKFPKDVDLLSRISIIEE--NSPERQIRMAFLAIVGSHKVNGVVELHSELIKTTIFKDFIKFYGPSKFVNVT 513 (879)
T ss_dssp HHHHHHHHHHSTTCTHHHHHHCSEEC--CSSSCEEEHHHHHHHHEEEEEESSHHHHHHHHHTTTHHHHHHHCGGGEEECC
T ss_pred HHHHHHHHHHcCCCHHHHHhcceecc--CCCcceeehHHHHHHhcCceeEehHHHHHHHHHHHhHHHHHhCCCCcccCcC
Confidence 99999999999999999999999887 333 8999999999999999999999999999999999999999 999999
Q ss_pred cccCcccccccCChhhhHHHHhhcCc--cccccChhhHhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHh-CCCCC-
Q 003188 486 NGITPRRWLRFCNPELSKIITKWLKT--DQWVTNLDLLVGLRQFADNTELQAEWESAKMASKKHLADYIWRVT-GVTID- 561 (840)
Q Consensus 486 NGI~~rrWl~~~NP~l~~li~~~~g~--~~w~~~~~~l~~l~~~~~d~~~~~~~~~~K~~nK~~L~~~i~~~~-G~~~d- 561 (840)
||||+|||+.+|||+|++||++++|+ ++|.+++++|++|+++++|++|+++|+++|++||++|++||++++ |+.+|
T Consensus 514 NGVt~rrWl~~~Np~L~~Li~~~iG~~~~~W~~d~~~L~~l~~~~~D~~f~~~l~~iK~~nK~~La~~i~~~~~g~~ld~ 593 (879)
T 1ygp_A 514 NGITPRRWLKQANPSLAKLISETLNDPTEEYLLDMAKLTQLEKYVEDKEFLKKWNQVKLNNKIRLVDLIKKENDGVDIIN 593 (879)
T ss_dssp CCBCHHHHTTTTCHHHHHHHHHHTTCTTCGGGTCGGGGGGGGGGGGCTHHHHHHHHHHHHHHHHHHHHHHHTTTTCCCSC
T ss_pred CCcCCchhhhhcCHHHHHHHHHhcCCChhhhhhCHHHHHHHHhhCCcHHHHHHHHHHHHHHHHHHHHHHHHHcCCcEecC
Confidence 99999999999999999999999993 499999999999999999999999999999999999999999999 99999
Q ss_pred ----CCCceEeecccchhhhhhhhhhhHHHHHHHHHhhcC------ccc-cCCCCCeEEEEEecCCcCCHHHHHHHHHHH
Q 003188 562 ----PNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMS------PQE-RKKTTPRTIMIGGKAFATYTNAKRIVKLVN 630 (840)
Q Consensus 562 ----p~~l~d~~vkR~heYKRq~Lnll~ii~~y~~ik~~~------p~~-~~~~~p~~~If~GKA~P~y~~aK~iIk~I~ 630 (840)
|+++||||||||||||||+||+|++++||.+||+ | |+. +++++|+||||||||||+|.+||.|||+|+
T Consensus 594 ~~~~p~sLfdvq~KR~heYKRq~LniL~ii~ry~~Ik~-~~~~~~~p~~~~~~~~P~~~IFaGKAaP~y~~aK~iIklI~ 672 (879)
T 1ygp_A 594 REYLDDTLFDMQVKRIHEYKRQQLNVFGIIYRYLAMKN-MLKNGASIEEVARKYPRKVSIFGGKSAPGYYMAKLIIKLIN 672 (879)
T ss_dssp STTGGGCEEEEEESCCCGGGTHHHHHHHHHHHHHHHHH-HHHTTCCHHHHHHHSCCEEEEEECCCCTTCHHHHHHHHHHH
T ss_pred CCCCCCeeeeeeeehhhHhHHHHHHHHHHHHHHHHHHh-CccccCCCcccccCCCCeEEEEeccCCCCcHHHHHHHHHHH
Confidence 9999999999999999999999999999999998 6 541 112579999999999999999999999999
Q ss_pred HHHhhhcCCcCCCCcceEEEEcCCCHHHHhhhccCccccccCCCCCccCCCcchhHHhhcCceEeeecCchhHHHHHHhc
Q 003188 631 DVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIG 710 (840)
Q Consensus 631 ~la~~in~d~~~~~~lkVvFl~nYnvslA~~ii~gaDv~l~iS~a~~EAsGTs~MKam~NGal~i~tlDGanvEi~~~vG 710 (840)
++|++|||||+++++|||||+|||||++|++|+|||||||||||||+||||||||||||||+|||||||||||||+++||
T Consensus 673 ~va~~iN~Dp~v~~~LKVVFlenY~VslAe~iipaaDvseqistag~EASGTsnMKfalNGaLtlgtlDGanvEi~e~vG 752 (879)
T 1ygp_A 673 CVADIVNNDESIEHLLKVVFVADYNVSKAEIIIPASDLSEHISTAGTEASGTSNMKFVMNGGLIIGTVDGANVEITREIG 752 (879)
T ss_dssp HHHHHHTTCGGGTTSEEEEEETTCCHHHHHHHGGGCSEEEECCCTTCCSCCHHHHHHHTTTCEEEEESCTHHHHHHHHHC
T ss_pred HHHHHhccChhhCCceEEEEeCCCCHHHHHHhhhhhhhhhhCCCCCccccCchhhHHHHcCCeeeecccchhHHHHHHcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcceEeecCccccchhhhhhccCCCCCCChhHHHHHHHHhcCCCCCCC---hHHHHHHHhhCCCCCCCccccccCChHHH
Q 003188 711 EENFFLFGAVAEQVPKLRKEREDGLFKPDPRFEEAKQFIRSGAFGSYD---YNPLLDSLEGNTGYGRGDYFLVGYDFPSY 787 (840)
Q Consensus 711 ~~N~~~fG~~~d~V~~~~~~~~y~~~~~~~~l~~v~~~~~~G~f~~~~---~~~l~~~L~~~~~~~~~D~~~~~~Df~~y 787 (840)
+||+|+||+++|||.+++++|.+..++.+|++++|+|+|.+|+|++.+ |++||++|+++ +|+|||++||+||
T Consensus 753 ~eN~fiFG~~~~ev~~~~~~~~~~~y~~~~~l~~v~d~i~~g~f~~~~~~~f~~l~~~L~~~-----~D~y~vl~Df~sY 827 (879)
T 1ygp_A 753 EDNVFLFGNLSENVEELRYNHQYHPQDLPSSLDSVLSYIESGQFSPENPNEFKPLVDSIKYH-----GDYYLVSDDFESY 827 (879)
T ss_dssp GGGSEEESCCHHHHHHHHHHHHHSCCCCCHHHHHHHHHTC--CCCTTSTTTTHHHHHHHHHS-----TTTTCHHHHHHHH
T ss_pred cccEEEccCCHHHHHHHHHhCchhccCCCHHHHHHHHHHhcCCCCCCChHHHHHHHHHHhcC-----CCeEEEeccHHHH
Confidence 999999999999999999988555678899999999999999997544 99999999876 7999999999999
Q ss_pred HHHHHHHHHHhcCHH-HHHHHHHHHhccCCCCChHHHHHHHHHHHhcccccc
Q 003188 788 LEAQDRVDQAYKDQK-KWLKMSILSTAGSGKFSSDRTIAQYAKEIWNITECR 838 (840)
Q Consensus 788 ~~~~~~~~~~Y~d~~-~W~~~~~~n~a~~g~FSsDrti~eYa~~iw~~~~~~ 838 (840)
++||++|.++|+|++ +|++|++.|||++|+|||||||+|||++||+++|++
T Consensus 828 ~~~q~~v~~~Y~d~~~~W~~~~i~NiA~~G~FSSDRtI~eYa~~IW~~~p~~ 879 (879)
T 1ygp_A 828 LATHELVDQEFHNQRSEWLKKSVLSLANVGFFSSDRCIEEYSDTIWNVEPVT 879 (879)
T ss_dssp HHHHHHHHHHHHHCHHHHHHHHHHHHHHHGGGBHHHHHHHHHHHTTCCCCC-
T ss_pred HHHHHHHHHHhcCcHHHHHHHHHHHHHhcCccCchHHHHHHHHHhhCCCCCC
Confidence 999999999999999 999999999999999999999999999999999964
No 2
>2gj4_A Glycogen phosphorylase, muscle form; transferase; HET: PLR 2TH; 1.60A {Oryctolagus cuniculus} SCOP: c.87.1.4 PDB: 2gm9_A* 1abb_A* 3nc4_A* 3l79_A* 2pyd_A* 2pyi_A* 3l7a_A* 3l7b_A* 3l7c_A* 3l7d_A* 2qnb_A* 1c8l_A* 1axr_A* 1gpy_A* 1e1y_A* 1lwo_A* 1pyg_A* 1uzu_A* 1lwn_A* 1xkx_A* ...
Probab=100.00 E-value=1.8e-232 Score=2029.61 Aligned_cols=809 Identities=47% Similarity=0.808 Sum_probs=760.8
Q ss_pred ccccccCCCCCCHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCceEEEEEehhcc
Q 003188 17 KIPAAANPLANEPSAIASNISYHVQYSPHFSPTKFEPEQAFFATAESVRDRLIQQWNETYHHFNKVDPKQTYYLSMEFLQ 96 (840)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~at~~~~y~ala~~vrd~l~~~w~~t~~~~~~~~~k~vyYlSmEfl~ 96 (840)
||++.......++++|+++|.+||++++|+++.+||+.++|.|||++|||+++++|.+|++++.+.+.|+||||||||||
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~a~~~~~y~al~~~vrd~~~~~w~~t~~~~~~~~~k~vyYlS~Efl~ 80 (824)
T 2gj4_A 1 QISVRGLAGVENVTELKKNFNRHLHFTLVKDRNVATPRDYYFALAHTVRDHLVGRWIRTQQHYYEKDPKRIYYLSLEFYM 80 (824)
T ss_dssp CCGGGCCCCHHHHHHHHHHHHHHHHHTTCCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECSCEEE
T ss_pred CcccccccccccHHHHHHHHHHHHHHHhCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEchhhcc
Confidence 35555533333567899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccchhHHhhccChHHHHHHHHHhcCCChHHHHhhccccCCCCCCcccchhhhHhhhhccCCCeEEEeeccCCccceEEee
Q 003188 97 GRTLTNAIGSLDIQNAYADALNNLGHVLEEIAEQEKDAALGNGGLGRLASCFLDSMATLNLPAWGYGLRYRYGLFKQKIT 176 (840)
Q Consensus 97 Gr~L~nnl~NLg~~~~~~eaL~~lg~~~~~l~~~E~d~~LgnGGLGrLAac~ldS~a~l~~p~~G~GlrY~~G~F~Q~i~ 176 (840)
||+|.|||+|||+++++++||+++|+|+++|+++|+||||||||||||||||||||||||+|++||||||+||||+|+|+
T Consensus 81 gr~L~n~l~nlg~~~~~~~~l~~~g~~l~~i~~~E~d~~LgnGGLGrLAacfldS~AtL~~P~~G~Gi~Y~~G~F~Q~i~ 160 (824)
T 2gj4_A 81 GRTLQNTMVNLALENACDEATYQLGLDMEELEEIEEDAGLGNGGLGRLAACFLDSMATLGLAAYGYGIRYEFGIFNQKIC 160 (824)
T ss_dssp ECCHHHHHHHHTCHHHHHHHHHHTTCCHHHHHTTSCCEEECCSHHHHHHHHHHHHHHHTTCCEEEEEECCSBCSCEEEEE
T ss_pred hhhhHHHHHHCCCHHHHHHHHHHhCCCHHHHHhcCCCcCcCCCcHHHHHHHHHHHHHhCCCCeEEEeecccCCCeeEEee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCceeeccccccccCCCcccccCCeeEEEEECCeEEEcCCCceeeeCCeEEEEEEeeeccCCCCCCceEEEEEEEEEcCC
Q 003188 177 KQGQEEVAEDWLEKFSPWEVVRHDVVFPVRFFGSVMVNPNGTRKWVGGEVVQAVAYDIPIPGYKTKNTISLRLWDAKASA 256 (840)
Q Consensus 177 dG~Q~E~pd~Wl~~~~pwe~~r~~~~~~V~f~g~~~~~~~g~~~w~~~~~v~av~yd~pi~gy~~~~~~~lrLw~a~v~~ 256 (840)
||||+|.||+||+.|||||++|++.+++|+|+|+|+...+| .+|++++.|+|||||+|||||+|++||+||||+|+ +.
T Consensus 161 dG~Q~E~~d~Wl~~~~pwe~~r~~~~~~V~f~g~v~~~~~g-~~w~~~~~v~av~yD~pi~Gy~~~~vn~lRlW~a~-~~ 238 (824)
T 2gj4_A 161 GGWQMEEADDWLRYGNPWEKARPEFTLPVHFYGRVEHTSQG-AKWVDTQVVLAMPYDTPVPGYRNNVVNTMRLWSAK-AP 238 (824)
T ss_dssp TTEEEEECCCTTTTCCTTCEECGGGCEEEEESCEEEECSSS-EEEESCEEEEEEEEEEEEECSSSSCEEEEEEEEEE-CC
T ss_pred CCEEEEcCccccccCCcccccCCCceEEEEeCCEEEecCCC-ceecccceEEEeeccCCcCCCCCCceEEEEEEEee-cC
Confidence 99999999999999999999999999999999999865678 37999999999999999999999999999999999 77
Q ss_pred CCccccccCcchhhhhHhhhhhhccccccccCCCCchhhhhhhhhhhhHHHHhHHHHHHHHHHHcc-cC-----cccccC
Q 003188 257 EDFNLFQFNDGQYESAAQLHSRAQQICAVLYPGDSTEEGKLLRLKQQFFLCSASLQDMILRFKERK-SG-----RQWSEF 330 (840)
Q Consensus 257 ~~~~l~~~~~~~y~~a~~~~~~~~~It~~LYp~D~~~~Gk~lRL~Qeyfl~~a~lqdiir~~~~~~-g~-----~~l~~l 330 (840)
+.||+..||.|+|..++..++.+|+||++|||+|++++||+||||||||||+||+|||||+|++.+ |. .+++.|
T Consensus 239 ~~f~~~~fn~G~~~~a~~d~~~~enIt~~LYp~D~~~~Gk~lRL~Qeyf~~sa~lqdilr~~~~~~~g~~~~~~~~~~~~ 318 (824)
T 2gj4_A 239 NDFNLKDFNVGGYIQAVLDRNLAENISRVLYPNDNFFEGKELRLKQEYFVVAATLQDIIRRFKSSKFGCRDPVRTNFDAF 318 (824)
T ss_dssp C----------CHHHHHHTHHHHHGGGSBCCCCSSCCCCCHHHHHHHHHHHHHHHHHHHHHHHC-----------CGGGH
T ss_pred cccchhhccCccHHHHHhcccchhhcCcCCCCCCCccchHhHhhhhhhhhhhhHHHHHHHHHHHhccccccccccchhhc
Confidence 789999999999999999999999999999999999999999999999999999999999998754 21 268888
Q ss_pred CCceEEEeCCCcccccHHHHHHHHHhhcCCChhHHhhhcCccEEEeecCChhhhHhhccHHHHHhhchhHHHHHHHHHHH
Q 003188 331 PSKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEALEKWSQAVMWKLLPRHMEIIEEIDKR 410 (840)
Q Consensus 331 ~~~~viHlNDtHpalaipElmR~l~d~~~l~~~~A~~i~~~~~vfT~HT~~~eglE~w~~~l~~~lLPr~~~ii~~in~~ 410 (840)
++|++||||||||||++|||||+|+|++|++|++||++|+++|+||||||+|||+|+||+++++++||||++||++||++
T Consensus 319 ~~p~viHlNDtHpal~i~ElmR~l~d~~~l~~d~A~~i~~~~~vfT~HTl~~eglE~wp~~l~~~lLPr~~~ii~~in~~ 398 (824)
T 2gj4_A 319 PDKVAIQLNDTHPSLAIPELMRVLVDLERLDWDKAWEVTVKTCAYTNHTVLPEALERWPVHLLETLLPRHLQIIYEINQR 398 (824)
T ss_dssp HHHEEEEEESSTTTTHHHHHHHHHHHTSCCCHHHHHHHHHHHEEEECCCCCGGGSCEEEHHHHHHHCHHHHHHHHHHHHH
T ss_pred CCCcEEEccCCchHhHHHHHHHHHHHhcCCCHHHHHHHhcCcEEEEeCCChHHHhhhchHHHHHHhCchHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCcccccccccccCCCCCCcccccccccccCCcccchhhhhHHHHHhhhhcCccccCCCCCcccccccCc
Q 003188 411 FIAMVRSTRSDLESKIPSMCILDNNPKKPVVRMANLCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITP 490 (840)
Q Consensus 411 f~~~~~~~~~~~~~~~~~~~iie~~~~~~~v~Ma~lai~~S~~VNgVS~lH~eilk~~~f~~~~~l~p~k~~~iTNGI~~ 490 (840)
|+.+++.+++.+.+.+.+++++++ .++++|||++|||++||+|||||++|++++|+++|++|+.++|++|+|||||||+
T Consensus 399 f~~~~~~~~~~~~~~~~~~~~i~~-~~~~~vnMa~lai~~S~~VNgVS~lH~e~ik~~~f~~~~~~~p~k~~~iTNGI~~ 477 (824)
T 2gj4_A 399 FLNRVAAAFPGDVDRLRRMSLVEE-GAVKRINMAHLCIAGSHAVNGVARIHSEILKKTIFKDFYELEPHKFQNKTNGITP 477 (824)
T ss_dssp HHHHHHHHSTTCHHHHHHHCSEEC-SSSCEEEHHHHHHHTCSCEEESSHHHHHHHHHTTTHHHHHHCGGGEEECCCCBCT
T ss_pred HHHHHHHHcCCcHHHHHhhhhhhh-cCCCcccHHHHHHHhcCceeeEcHHHHHHHhhHHhHHHHHcChhhcccccCCcCh
Confidence 999999999999888888999885 1134899999999999999999999999999999999999999999999999999
Q ss_pred ccccccCChhhhHHHHhhcCccccccChhhHhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCceEeec
Q 003188 491 RRWLRFCNPELSKIITKWLKTDQWVTNLDLLVGLRQFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQV 570 (840)
Q Consensus 491 rrWl~~~NP~l~~li~~~~g~~~w~~~~~~l~~l~~~~~d~~~~~~~~~~K~~nK~~L~~~i~~~~G~~~dp~~l~d~~v 570 (840)
|||+.+|||+++++|++++| ++|.+|+++|++|.++++|++|+++|+++|++||++|+++|++++|+.+||++||||||
T Consensus 478 rrWl~~~NP~l~~lI~~~ig-~~W~~~~~~l~~L~~y~~d~~~~~~~~~~K~~nK~~la~~l~~~~Gl~vdpd~l~~g~v 556 (824)
T 2gj4_A 478 RRWLVLCNPGLAEIIAERIG-EEYISDLDQLRKLLSYVDDEAFIRDVAKVKQENKLKFAAYLEREYKVHINPNSLFDVQV 556 (824)
T ss_dssp CCCCCCTCHHHHHHHHHHHC-SGGGGCGGGGGGGGGGTTCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCTTSEEEEEE
T ss_pred hhhcccCCHhHHHHHHHhcC-chhhhCHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcCCCcceEeee
Confidence 99999999999999999999 59999999999999999999999999999999999999999999999999999999999
Q ss_pred ccchhhhhhhhhhhHHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcCCCCcceEEE
Q 003188 571 KRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYLKVVF 650 (840)
Q Consensus 571 kR~heYKRq~Lnll~ii~~y~~ik~~~p~~~~~~~p~~~If~GKA~P~y~~aK~iIk~I~~la~~in~d~~~~~~lkVvF 650 (840)
||||+||||+||+|+++++|.+|++ +|+. +++|+||||+|||||+|++||+|||+|+++|+++||||+++++|||||
T Consensus 557 kRl~eYKRq~L~~l~~i~~~~~i~~-~~~~--~~~p~q~If~GKA~P~y~~aK~iIkli~~va~~in~Dp~v~~~lKVvF 633 (824)
T 2gj4_A 557 KRIHEYKRQLLNCLHVITLYNRIKK-EPNK--FVVPRTVMIGGKAAPGYHMAKMIIKLITAIGDVVNHDPVVGDRLRVIF 633 (824)
T ss_dssp SCCCGGGTHHHHHHHHHHHHHHHHH-CTTS--CCCCEEEEEECCCCTTCHHHHHHHHHHHHHHHHHTTCTTTGGGEEEEE
T ss_pred ecchhhcchhhHHHHHHHHHHHHHh-CCCC--CCCCEEEEEEEeCCHhHHHHHHHHHHHHHHHHHhccCcccCCceEEEE
Confidence 9999999999988999999999998 7653 577999999999999999999999999999999999999999999999
Q ss_pred EcCCCHHHHhhhccCccccccCCCCCccCCCcchhHHhhcCceEeeecCchhHHHHHHhcCcceEeecCccccchhhhhh
Q 003188 651 VPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAVAEQVPKLRKE 730 (840)
Q Consensus 651 l~nYnvslA~~ii~gaDv~l~iS~a~~EAsGTs~MKam~NGal~i~tlDGanvEi~~~vG~~N~~~fG~~~d~V~~~~~~ 730 (840)
+|||||++||+|+|||||||||||||+||||||||||||||+|||||+|||||||.++||++|+|+||+.+++|..++..
T Consensus 634 l~nYdvslA~~I~~gaDv~l~~S~ag~EAsGTs~MKamlNGaLtigtlDGanvEi~e~vG~~Ngf~FG~~~~ev~~l~~~ 713 (824)
T 2gj4_A 634 LENYRVSLAEKVIPAADLSEQISTAGTEASGTGNMKFMLNGALTIGTMDGANVEMAEEAGEENFFIFGMRVEDVDRLDQR 713 (824)
T ss_dssp ETTCCHHHHHHHGGGCSEEEECCCTTSCSCCSHHHHHHHTTCEEEECSCTTHHHHHHHHCGGGSEECSCCHHHHHHHHHH
T ss_pred ECCCCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHcCceEEEEecCccchhhhccCCCCEEEeCCcHHHHHHHHHc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999877655
Q ss_pred ccCCC---CCCChhHHHHHHHHhcCCCCCCC---hHHHHHHHhhCCCCCCCccccccCChHHHHHHHHHHHHHhcCHHHH
Q 003188 731 REDGL---FKPDPRFEEAKQFIRSGAFGSYD---YNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYKDQKKW 804 (840)
Q Consensus 731 ~~y~~---~~~~~~l~~v~~~~~~G~f~~~~---~~~l~~~L~~~~~~~~~D~~~~~~Df~~y~~~~~~~~~~Y~d~~~W 804 (840)
+ |+| |+.+|++++|++.+.+|+|++.+ |.+||++|++ +|+|||++||+||+++|+++..+|.|+++|
T Consensus 714 ~-~~a~~~Y~~~~~l~~v~d~i~~g~fs~~~~~~y~~ly~~l~~------~D~~~~~~Df~~y~~~q~~v~~~y~d~~~W 786 (824)
T 2gj4_A 714 G-YNAQEYYDRIPELRQIIEQLSSGFFSPKQPDLFKDIVNMLMH------HDRFKVFADYEEYVKCQERVSALYKNPREW 786 (824)
T ss_dssp C-CCHHHHHHHCHHHHHHHHHHHHTTTCTTSTTTTHHHHHHHHH------CCTTCTGGGHHHHHHHHHHHHHHHTCHHHH
T ss_pred C-CCHHHHhcCCHHHHHHHHHHHhCCCCCCChHHHHHHHHHHHc------CChhhhhhhHHHHHHHHHHHHHhhcCHHHH
Confidence 5 877 57789999999999999997544 9999999985 599999999999999999999999999999
Q ss_pred HHHHHHHhccCCCCChHHHHHHHHHHHhccccccC
Q 003188 805 LKMSILSTAGSGKFSSDRTIAQYAKEIWNITECRT 839 (840)
Q Consensus 805 ~~~~~~n~a~~g~FSsDrti~eYa~~iw~~~~~~~ 839 (840)
.+|++.|||.+|+|||||||+|||++||+++|++.
T Consensus 787 ~~~~~~nia~~g~FssdRtI~eY~~~iw~~~~~~~ 821 (824)
T 2gj4_A 787 TRMVIRNIATSGKFSSDRTIAQYAREIWGVEPSRQ 821 (824)
T ss_dssp HHHHHHHHTTCGGGBHHHHHHHHHHHTTCCCCCCC
T ss_pred HHHHHHHHHHhCCcCcHHHHHHHHHHHhCCCCCCC
Confidence 99999999999999999999999999999999864
No 3
>1l5w_A Maltodextrin phosphorylase; enzymatic catalysis, substrate complex, trans; HET: GLC PLP; 1.80A {Escherichia coli} SCOP: c.87.1.4 PDB: 1l5v_A* 1l6i_A* 2asv_A* 2av6_A* 2aw3_A* 2azd_A* 1qm5_A* 1e4o_A* 2ecp_A* 1ahp_A*
Probab=100.00 E-value=1.8e-231 Score=2015.39 Aligned_cols=788 Identities=43% Similarity=0.730 Sum_probs=760.2
Q ss_pred CCCCHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCceEEEEEehhccccchhHHh
Q 003188 25 LANEPSAIASNISYHVQYSPHFSPTKFEPEQAFFATAESVRDRLIQQWNETYHHFNKVDPKQTYYLSMEFLQGRTLTNAI 104 (840)
Q Consensus 25 ~~~~~~~~~~~~~~~l~~~~g~~~~~at~~~~y~ala~~vrd~l~~~w~~t~~~~~~~~~k~vyYlSmEfl~Gr~L~nnl 104 (840)
+-.++++|+++|.+||++++||++.+||+.++|.|||.+|||++.++|.+|++ .+.|+||||||||||||+|.|||
T Consensus 3 ~~~~~~~~~~~~~~~l~~~~~~~~~~a~~~~~y~al~~~~rd~l~~~w~~t~~----~~~k~v~Y~S~Efl~gr~L~n~l 78 (796)
T 1l5w_A 3 PIFNDKQFQEALSRQWQRYGLNSAAEMTPRQWWLAVSEALAEMLRAQPFAKPV----ANQRHVNYISMEFLIGRLTGNNL 78 (796)
T ss_dssp CCCCHHHHHHHHHHHHHHTTCSSGGGCCHHHHHHHHHHHHHHHHHTSCCCCCC----SSCCEEEEECSCCCCCCCHHHHH
T ss_pred ccccHHHHHHHHHHHHHHHhCCChHhCCHHHHHHHHHHHHHHHHHHHHHHhcc----cCCceEEEEehHHhHHHHHHHHH
Confidence 34578999999999999999999999999999999999999999999999996 46799999999999999999999
Q ss_pred hccChHHHHHHHHHhcCCChHHHHhhccccCCCCCCcccchhhhHhhhhccCCCeEEEeeccCCccceEEeeCCceeecc
Q 003188 105 GSLDIQNAYADALNNLGHVLEEIAEQEKDAALGNGGLGRLASCFLDSMATLNLPAWGYGLRYRYGLFKQKITKQGQEEVA 184 (840)
Q Consensus 105 ~NLg~~~~~~eaL~~lg~~~~~l~~~E~d~~LgnGGLGrLAac~ldS~a~l~~p~~G~GlrY~~G~F~Q~i~dG~Q~E~p 184 (840)
+|||+++++++||+++|+|+++|+++|+||||||||||||||||||||||||+|++||||||+||||+|+|.||||+|.|
T Consensus 79 ~nlg~~~~~~~~l~~~g~~l~~~~~~E~d~~LgnGGLGrLAacfldS~a~l~~p~~G~Gi~Y~~G~F~Q~i~dG~Q~E~~ 158 (796)
T 1l5w_A 79 LNLGWYQDVQDSLKAYDINLTDLLEEEIDPALGNGGLGRLAACFLDSMATVGQSATGYGLNYQYGLFRQSFVDGKQVEAP 158 (796)
T ss_dssp HHHTCHHHHHHHHHTTTCCHHHHHTTCCCCCCCCSHHHHHHHHHHHHHHHTTCCEEEEEECCSSCSCEEEEETTEEEEEC
T ss_pred HhcCcHHHHHHHHHHcCCCHHHHHhcCCCcCcCCCcHHHHHHHHHHHHHhCCCCeEEEeeeecCCceeEEecCCeeEEec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccCCCcccccCCeeEEEEECCeEEEcCCCceeeeCCeEEEEEEeeeccCCCCCCceEEEEEEEEEcCCCCcccccc
Q 003188 185 EDWLEKFSPWEVVRHDVVFPVRFFGSVMVNPNGTRKWVGGEVVQAVAYDIPIPGYKTKNTISLRLWDAKASAEDFNLFQF 264 (840)
Q Consensus 185 d~Wl~~~~pwe~~r~~~~~~V~f~g~~~~~~~g~~~w~~~~~v~av~yd~pi~gy~~~~~~~lrLw~a~v~~~~~~l~~~ 264 (840)
|+|+..|+|||++|++.+|+|+|+|+|+. + + +|+++++|+|||||+|||||+|++||+||||+|++++ .|+|..|
T Consensus 159 d~wl~~~~pwe~~r~~~~~~V~f~g~~~~--~-~-~w~~~~~v~av~yd~pi~Gy~~~~~n~lrlW~a~~~~-~f~l~~f 233 (796)
T 1l5w_A 159 DDWHRSNYPWFRHNEALDVQVGIGGKVTK--D-G-RWEPEFTITGQAWDLPVVGYRNGVAQPLRLWQATHAH-PFDLTKF 233 (796)
T ss_dssp CCCCGGGCTTCEECGGGCEEEEESCEECT--T-S-CEECSEEEEEEEEEEEEECSSSCCEEEEEEEEEECSS-CCCHHHH
T ss_pred CccccCCCcceeecCCcEEEEeeCCEEee--c-c-eecCCceEEEEEecccccCCCCCceEEEEEEEeccCc-ccChhhc
Confidence 99999999999999999999999999973 2 4 6999999999999999999999999999999999654 7999999
Q ss_pred CcchhhhhHhhhhhhccccccccCCCCchhhhhhhhhhhhHHHHhHHHHHHHHHHHcccCcccccCCCceEEEeCCCccc
Q 003188 265 NDGQYESAAQLHSRAQQICAVLYPGDSTEEGKLLRLKQQFFLCSASLQDMILRFKERKSGRQWSEFPSKVAVQLNDTHPT 344 (840)
Q Consensus 265 ~~~~y~~a~~~~~~~~~It~~LYp~D~~~~Gk~lRL~Qeyfl~~a~lqdiir~~~~~~g~~~l~~l~~~~viHlNDtHpa 344 (840)
+.|+|.+|+++++.+|+||++|||+|++++||+|||+||||||+|++|+|+|+|++.++ +++.|++|++|||||||||
T Consensus 234 n~gdy~~a~~~~~~~~~It~~LYp~D~~~~Gk~lRL~Qe~ff~~a~lq~ilr~~~~~~~--~~~~l~~p~viHlNDtHpa 311 (796)
T 1l5w_A 234 NDGDFLRAEQQGINAEKLTKVLYPNDNAFEGKKLRLMQQYFQCACSVADILRRHHLAGR--KLHELADYEVIQLNDTHPT 311 (796)
T ss_dssp HTTCTTGGGHHHHHHHGGGTCSSCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC--CGGGHHHHEEEEEESSTTT
T ss_pred CCccHhhhhhchHhHhhhhhcCcCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHcCC--ChhhcCCccEEEecCCccH
Confidence 99999999999999999999999999999999999999999999999999999998884 6888889999999999999
Q ss_pred ccHHHHHHHHHhhcCCChhHHhhhcCccEEEeecCChhhhHhhccHHHHHhhchhHHHHHHHHHHHHHHHHHHhcCCCcc
Q 003188 345 LAIPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEALEKWSQAVMWKLLPRHMEIIEEIDKRFIAMVRSTRSDLES 424 (840)
Q Consensus 345 laipElmR~l~d~~~l~~~~A~~i~~~~~vfT~HT~~~eglE~w~~~l~~~lLPr~~~ii~~in~~f~~~~~~~~~~~~~ 424 (840)
|++|||||+++|++|++|++||++|+.+|+||||||+|||+|+||+++|+++||||++||++||++|++++..++|.+++
T Consensus 312 l~i~ElmR~l~d~~~~~~d~A~~i~~~~~vyT~HTl~~egle~wp~~l~~~~lpr~~~ii~~I~~~f~~~~~~~~~~~~~ 391 (796)
T 1l5w_A 312 IAIPELLRVLIDEHQMSWDDAWAITSKTFAYTNHTLMPEALERWDVKLVKGLLPRHMQIINEINTRFKTLVEKTWPGDEK 391 (796)
T ss_dssp THHHHHHHHHHHHSCCCHHHHHHHHTTTEEEECCCCSGGGSCEEEHHHHHHHCHHHHHHHHHHHHHHHHHHHHHSTTCHH
T ss_pred hHHHHHHHHHhhhcCCCHHHHHHHhhccEEEEecCCcHhhhhcCCHHHHHHHhHHHHHHHhccCHHHHHHHHHhcCCcHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccccccCCCCCCcccccccccccCCcccchhhhhHHHHHhhhhcCccccCCCCCcccccccCcccccccCChhhhHH
Q 003188 425 KIPSMCILDNNPKKPVVRMANLCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPRRWLRFCNPELSKI 504 (840)
Q Consensus 425 ~~~~~~iie~~~~~~~v~Ma~lai~~S~~VNgVS~lH~eilk~~~f~~~~~l~p~k~~~iTNGI~~rrWl~~~NP~l~~l 504 (840)
.+.+++++++ ++|||++|||++||+|||||++|++++|+++|++|+.++|++|+|||||||+|||+.+|||+++++
T Consensus 392 ~~~~~~i~~~----~~vnMa~lai~~S~~VNgVS~lH~e~ik~~~f~~~~~~~p~k~~~iTNGI~~rrWl~~~NP~l~~l 467 (796)
T 1l5w_A 392 VWAKLAVVHD----KQVHMANLCVVGGFAVNGVAALHSDLVVKDLFPEYHQLWPNKFHNVTNGITPRRWIKQCNPALAAL 467 (796)
T ss_dssp HHHHHCSEET----TEEEHHHHHHHHSSEEEESSHHHHHHHHHTTSHHHHHHCGGGEEECCCCBCHHHHTTTTCHHHHHH
T ss_pred HHhhhhcccC----CcccHHHHHHHhcCccccccHHHHHHHHhHHhhHHHHhCccccCCCcCCCcHHHhhcccCHhHHHH
Confidence 9999998764 499999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcCccccccChhhHhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCceEeecccchhhhhhhhhhh
Q 003188 505 ITKWLKTDQWVTNLDLLVGLRQFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQVKRIHEYKRQLLNIL 584 (840)
Q Consensus 505 i~~~~g~~~w~~~~~~l~~l~~~~~d~~~~~~~~~~K~~nK~~L~~~i~~~~G~~~dp~~l~d~~vkR~heYKRq~Lnll 584 (840)
|+++|| ++|.+|+++|++|+++++|++|+++|.++|++||++|++||++++|+.+||++|||||||||||||||+||+|
T Consensus 468 i~~~~g-~~w~~d~~~l~~l~~~~~d~~~~~~l~~~K~~nK~~L~~~l~~~~Gl~vdpd~l~~~~vkRl~eYKRq~Lnil 546 (796)
T 1l5w_A 468 LDKSLQ-KEWANDLDQLINLEKFADDAKFRQQYREIKQANKVRLAEFVKVRTGIEINPQAIFDIQIKRLHEYKRQHLNLL 546 (796)
T ss_dssp HHHHCS-SCCTTCGGGGGGGGGGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCTTSEEEEEESCCCGGGTHHHHHH
T ss_pred HHHhcC-cccccCHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcCCCcceEeeeecchhhcccCEeHH
Confidence 999999 5999999999999999999999999778999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcCCCCcceEEEEcCCCHHHHhhhcc
Q 003188 585 GAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIP 664 (840)
Q Consensus 585 ~ii~~y~~ik~~~p~~~~~~~p~~~If~GKA~P~y~~aK~iIk~I~~la~~in~d~~~~~~lkVvFl~nYnvslA~~ii~ 664 (840)
+++++|.+||+ ||+. +++|+||||+|||||+|++||.|||+|+++|++|||||+++++|||||+|||||++||+|+|
T Consensus 547 ~ii~~~~~i~~-~~~~--~~~p~q~If~GKA~P~y~~aK~iIk~i~~va~~in~Dp~~~~~lKVvfl~nY~vslA~~I~~ 623 (796)
T 1l5w_A 547 HILALYKEIRE-NPQA--DRVPRVFLFGAKAAPGYYLAKNIIFAINKVADVINNDPLVGDKLKVVFLPDYCVSAAEKLIP 623 (796)
T ss_dssp HHHHHHHHHHT-CTTC--CCCCEEEEEECCCCTTCHHHHHHHHHHHHHHHHHHTCTTTGGGEEEEECSSCCHHHHHHHGG
T ss_pred HHHHHHHHHhc-CCCC--CCCCeEEEEEecCChhHHHHHHHHHHHHHHHHHhccccccCCceEEEEECCCCHHHHHHHhh
Confidence 99999999998 7764 56799999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccccCCCCCccCCCcchhHHhhcCceEeeecCchhHHHHHHhcCcceEeecCccccchhhhhhccCCC---CCCChh
Q 003188 665 GSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAVAEQVPKLRKEREDGL---FKPDPR 741 (840)
Q Consensus 665 gaDv~l~iS~a~~EAsGTs~MKam~NGal~i~tlDGanvEi~~~vG~~N~~~fG~~~d~V~~~~~~~~y~~---~~~~~~ 741 (840)
||||||||||||+||||||||||||||+|||||||||||||.+++|++|+|+||+++++|.+++..+ |+| |+.+|+
T Consensus 624 gaDv~l~~S~a~~EAsGTs~MKam~NGaL~iGtLDGanvEi~e~vG~~NgF~FG~~~~ev~~l~~~~-y~a~~~y~~~~~ 702 (796)
T 1l5w_A 624 AADISEQISTAGKEASGTGNMKLALNGALTVGTLDGANVEIAEKVGEENIFIFGHTVEQVKAILAKG-YDPVKWRKKDKV 702 (796)
T ss_dssp GCSEEEECCCTTTCCCCSHHHHHHHTTCEEEECSCTTHHHHHHHHCGGGSEECSCCHHHHHHHHHHC-CCHHHHHHHCHH
T ss_pred hcceeecCCCCCCCCCchHHHHHHHcCCeeecCcCCeeeehhhccCCCcEEEecCCHHHHHHHHHcc-cCHHHHhhcCHH
Confidence 9999999999999999999999999999999999999999999999999999999999999998876 887 466889
Q ss_pred HHHHHHHHhcCCCCCCC---hHHHHHHHhhCCCCCCCccccccCChHHHHHHHHHHHHHhcCHHHHHHHHHHHhccCCCC
Q 003188 742 FEEAKQFIRSGAFGSYD---YNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYKDQKKWLKMSILSTAGSGKF 818 (840)
Q Consensus 742 l~~v~~~~~~G~f~~~~---~~~l~~~L~~~~~~~~~D~~~~~~Df~~y~~~~~~~~~~Y~d~~~W~~~~~~n~a~~g~F 818 (840)
++++++.+.+|.|++.+ |.+||++|+++ .+|+|+|++||+||++||++|.++|+|+++|++|++.|||++|+|
T Consensus 703 ~~~vvd~~~~g~fs~~~~~~y~~Ly~~L~~~----~~D~~~v~~Df~~y~~~q~~v~~~Y~d~~~W~~~~i~nia~~g~F 778 (796)
T 1l5w_A 703 LDAVLKELESGKYSDGDKHAFDQMLHSIGKQ----GGDPYLVMADFAAYVEAQKQVDVLYRDQEAWTRAAILNTARCGMF 778 (796)
T ss_dssp HHHHHHHHHHTTTTTTCTTTTHHHHHHTSTT----TCCTTCHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHCGGG
T ss_pred HHHHHHHHHcCCCCCCcHHHHHHHHHHHhcc----CCCceeehhhHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHhcCcc
Confidence 99999999999997544 99999999741 149999999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHHHhcccc
Q 003188 819 SSDRTIAQYAKEIWNITE 836 (840)
Q Consensus 819 SsDrti~eYa~~iw~~~~ 836 (840)
||||||+|||++||+++|
T Consensus 779 ssdRti~eY~~~iw~~~P 796 (796)
T 1l5w_A 779 SSDRSIRDYQARIWQAKR 796 (796)
T ss_dssp BHHHHHHHHHHHTTTSCC
T ss_pred CchHHHHHHHHHHhCCCC
Confidence 999999999999999987
No 4
>2c4m_A Glycogen phosphorylase; allosteric control, phosphate dependence, starch degrading, transferase, glycosyltransferase; HET: PLP; 1.9A {Corynebacterium callunae}
Probab=100.00 E-value=4.5e-228 Score=1986.63 Aligned_cols=783 Identities=44% Similarity=0.726 Sum_probs=749.2
Q ss_pred CCHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCceEEEEEehhccccchhHHhhc
Q 003188 27 NEPSAIASNISYHVQYSPHFSPTKFEPEQAFFATAESVRDRLIQQWNETYHHFNKVDPKQTYYLSMEFLQGRTLTNAIGS 106 (840)
Q Consensus 27 ~~~~~~~~~~~~~l~~~~g~~~~~at~~~~y~ala~~vrd~l~~~w~~t~~~~~~~~~k~vyYlSmEfl~Gr~L~nnl~N 106 (840)
.++++|+++|.+||++++||++.+||+.++|.|||.+|||++.++|.+|++.+.+. |+||||||||||||+|.|||+|
T Consensus 4 ~~~~~~~~~~~~~l~~~~~~~~~~a~~~~~y~al~~~vrd~l~~~w~~t~~~~~~~--k~v~Y~S~Efl~gr~L~n~l~n 81 (796)
T 2c4m_A 4 EKQPLPAALVGSHVRAAAGTPADLATDRKFWTGLSRAVQERIADDWERTREAYGAA--RQQHYFSAEFLMGRALLNNLTN 81 (796)
T ss_dssp --CCSCHHHHHHHHHHHHSSCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTS--CEEEEECSCCCCBCSHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHhCCChHHCCHHHHHHHHHHHHHHHHHHHHHHhhhhhccC--CeEEEEehhhcchhhhhhHHHh
Confidence 34568999999999999999999999999999999999999999999999987654 9999999999999999999999
Q ss_pred cChHHHHHHHHHhcCCChHHHHhhccccCCCCCCcccchhhhHhhhhccCCCeEEEeeccCCccceEEeeCCceeecccc
Q 003188 107 LDIQNAYADALNNLGHVLEEIAEQEKDAALGNGGLGRLASCFLDSMATLNLPAWGYGLRYRYGLFKQKITKQGQEEVAED 186 (840)
Q Consensus 107 Lg~~~~~~eaL~~lg~~~~~l~~~E~d~~LgnGGLGrLAac~ldS~a~l~~p~~G~GlrY~~G~F~Q~i~dG~Q~E~pd~ 186 (840)
||+++++++||+++|+|+++|+++|+||||||||||||||||||||||||+|++||||||+||||+|+|.||||+|.||+
T Consensus 82 lg~~~~~~~~l~~~g~~l~~~~~~E~d~~LgnGGLGrLAac~ldS~a~l~~p~~G~Gl~Y~~G~F~Q~i~dG~Q~E~~d~ 161 (796)
T 2c4m_A 82 LGLVDEAAAATRELGHELTDILEIENDAALGNGGLGRLAACFLDSAVTQDYPVTGYGLLYRFGLFRQSFNEGFQVEKPDP 161 (796)
T ss_dssp TTCHHHHHHHHHHTTCCHHHHHTTCCCBCCCCSHHHHHHHHHHHHHHHTTCCEEEEEECCSSCSCEEEEETTEEEEECCC
T ss_pred cccHHHHHHHHHHcCCCHHHHHhhccccccCCCcHHHHHHHHHHHHHhCCCCeEEEeecccCCCeEEEeeCCEEEeeCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCcccccCCeeEEEEECCeEEEcCCCceeeeCCeEEEEEEeeeccCCCCCCceEEEEEEEEEcCCCCccccccCc
Q 003188 187 WLEKFSPWEVVRHDVVFPVRFFGSVMVNPNGTRKWVGGEVVQAVAYDIPIPGYKTKNTISLRLWDAKASAEDFNLFQFND 266 (840)
Q Consensus 187 Wl~~~~pwe~~r~~~~~~V~f~g~~~~~~~g~~~w~~~~~v~av~yd~pi~gy~~~~~~~lrLw~a~v~~~~~~l~~~~~ 266 (840)
|++.|+|||++|++.+|+|+|+|+ +|+|||||+|||||+|+++|+||||+++++ ..|+|..|+.
T Consensus 162 wl~~g~pwe~~r~~~~~~V~f~g~---------------~v~a~~yd~pi~gy~~~~~n~lrlW~a~~~-~~f~l~~fn~ 225 (796)
T 2c4m_A 162 WREEEYPFTIRRASDQLVVCFDDM---------------KTRAIPYDMPITGYGTHNVGTLRLWKAEPW-EEFDYDAFNA 225 (796)
T ss_dssp SSSSCCTTSEECGGGCEEEEETTE---------------EEEEEEEEEEECCTTCCCCEEEEEEEEEES-SSSCHHHHHT
T ss_pred cccCCCceeEecCCcEEEEEeCCE---------------EEEEEEEeccccCcCCCceEEEEEEecccc-cccchhhccC
Confidence 999999999999999999999974 577999999999999999999999999944 4789989999
Q ss_pred chhhhhHhhhhhhccccccccCCCCchhhhhhhhhhhhHHHHhHHHHHHHHHHHcccCcccccCCCceEEEeCCCccccc
Q 003188 267 GQYESAAQLHSRAQQICAVLYPGDSTEEGKLLRLKQQFFLCSASLQDMILRFKERKSGRQWSEFPSKVAVQLNDTHPTLA 346 (840)
Q Consensus 267 ~~y~~a~~~~~~~~~It~~LYp~D~~~~Gk~lRL~Qeyfl~~a~lqdiir~~~~~~g~~~l~~l~~~~viHlNDtHpala 346 (840)
|+|.+|+++++.+|+||++|||+|++++||+|||+||||||+||+|+|+|+|++.+| +|+.|++|++||||||||||+
T Consensus 226 gdy~~a~~~~~~~~~It~~LYp~D~~~~Gk~lRL~Qe~ff~~a~lq~ilr~~~~~~~--~l~~l~~p~viHlNDtHpal~ 303 (796)
T 2c4m_A 226 QRFTDAIIERERVSDICRVLYPNDTTYEGKKLRVRQQYFFTSASLQAMIQDHLAHHK--DLSNFAEFHSVQLNDTHPVLA 303 (796)
T ss_dssp TCHHHHHHHHHHHHHHHHSSSCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSS--CSTTHHHHEEEEEESSTTTTH
T ss_pred cchhhhhhchHhhhchhhcCcCCCCCcchHHHHHHhHHHHHHHHHHHHHHHHHHhCC--ChhhcCCCeEEEeCCChHHhH
Confidence 999999999999999999999999999999999999999999999999999998884 688888999999999999999
Q ss_pred HHHHHHHHHhhcCCChhHHhhhcCccEEEeecCChhhhHhhccHHHHHhhchhHHHHHHHHHHHHHHHHHHhcCCCcccc
Q 003188 347 IPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEALEKWSQAVMWKLLPRHMEIIEEIDKRFIAMVRSTRSDLESKI 426 (840)
Q Consensus 347 ipElmR~l~d~~~l~~~~A~~i~~~~~vfT~HT~~~eglE~w~~~l~~~lLPr~~~ii~~in~~f~~~~~~~~~~~~~~~ 426 (840)
+|||||+++|++|++|++||++|+.+|+||||||+|||+|+||+++|+++||||++||++||++|+.++..+ |.+++++
T Consensus 304 i~ElmR~l~d~~~~~~d~A~~i~~~~~vyT~HTl~~egle~wp~~l~~~~lpr~~~ii~~I~~~~~~~~~~~-~~~~~~~ 382 (796)
T 2c4m_A 304 IPELMRLLMDEHDMGWEESWAIVSKTFAYTNHTVLTEALEQWDEQIFQQLFWRVWEIIAEIDRRFRLERAAD-GLDEETI 382 (796)
T ss_dssp HHHHHHHHHHHSCCCHHHHHHHHHHHEEEECCCSSSTTSCEEEHHHHHHHCHHHHHHHHHHHHHHHHHHHHT-TCCHHHH
T ss_pred HHHHHHHHhhhcCCCHHHHHHHhhccEEEEecCchHHHhhhCCHHHHHHHhHHHHHHHcCcCHHHHHHHHhc-CCcHhhh
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999 9999999
Q ss_pred cccccccCCCCCCcccccccccccCCcccchhhhhHHHHHhhhhcCccccCCCCCcccccccCcccccccCChhhhHHHH
Q 003188 427 PSMCILDNNPKKPVVRMANLCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPRRWLRFCNPELSKIIT 506 (840)
Q Consensus 427 ~~~~iie~~~~~~~v~Ma~lai~~S~~VNgVS~lH~eilk~~~f~~~~~l~p~k~~~iTNGI~~rrWl~~~NP~l~~li~ 506 (840)
.+++++++ ++|||++|||++||+|||||++|++++|+++|++|+.++|++|.|||||||+|||+.+|||+++++|+
T Consensus 383 ~~~~i~~~----~~vnMa~lai~~S~~VNgVS~lHae~ik~~~f~~~~~~~p~kf~~iTNGI~~rrWl~~~NP~l~~li~ 458 (796)
T 2c4m_A 383 NRMAPIQH----GTVHMAWIACYAAYSINGVAALHTEIIKAETLADWYALWPEKFNNKTNGVTPRRWLRMINPGLSDLLT 458 (796)
T ss_dssp HHHCSEET----TEEEHHHHHHHHCSEEEESSHHHHHHHHHTTTHHHHHHCGGGEEECCCCBCTCCCCCTTCHHHHHHHH
T ss_pred hcccceeC----CcccHHHHHHHhcCceeeccHHHHHHhhhhhhhhHHHcCccccccccCCcchHHhhcccCHhHHHHHH
Confidence 99998764 49999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcCccccccChhhHhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCceEeecccchhhhhhhhhhhHH
Q 003188 507 KWLKTDQWVTNLDLLVGLRQFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGA 586 (840)
Q Consensus 507 ~~~g~~~w~~~~~~l~~l~~~~~d~~~~~~~~~~K~~nK~~L~~~i~~~~G~~~dp~~l~d~~vkR~heYKRq~Lnll~i 586 (840)
+++|+++|.+|+++|++|+++++|++|+++|.++|++||++|++||++++|+.+||++|||||||||||||||+||+|++
T Consensus 459 ~~~g~~~w~~d~~~l~~l~~~~~d~~~~~~l~~~K~~nK~~L~~~l~~~~Gl~vdpd~l~~~~vkRlheYKRq~Lnil~i 538 (796)
T 2c4m_A 459 RLSGSDDWVTDLDELKKLRSYADDKSVLEELRAIKAANKQDFAEWILERQGIEIDPESIFDVQIKRLHEYKRQLMNALYV 538 (796)
T ss_dssp HHHSSSGGGGCGGGGGGGGGGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCTTSEEEEEECCCCGGGTHHHHHHHH
T ss_pred HhcCchhhhhChHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCcEEEEeecchhhcccCEeHHHH
Confidence 99994489999999999999999999999998999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcCCCCcceEEEEcCCCHHHHhhhccCc
Q 003188 587 IYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGS 666 (840)
Q Consensus 587 i~~y~~ik~~~p~~~~~~~p~~~If~GKA~P~y~~aK~iIk~I~~la~~in~d~~~~~~lkVvFl~nYnvslA~~ii~ga 666 (840)
+++|.+||+ +|+. +++|+||||+|||||+|++||+|||+|+++|++|||||+++++|||||+|||||++||+|+|||
T Consensus 539 i~~~~~i~~-~~~~--~~~p~q~If~GKA~P~y~~aK~iIk~i~~va~~in~dp~~~~~lKVvFl~nY~vslA~~I~~ga 615 (796)
T 2c4m_A 539 LDLYFRIKE-DGLT--DIPARTVIFGAKAAPGYVRAKAIIKLINSIADLVNNDPEVSPLLKVVFVENYNVSPAEHILPAS 615 (796)
T ss_dssp HHHHHHHHT-SCCC--SSCCEEEEEECCCCTTCHHHHHHHHHHHHHHHHHHTCTTTTTTEEEEEETTCCHHHHHHHGGGC
T ss_pred HHHHHHHhh-CCCC--CCCCeEEEEEecCCHhHHHHHHHHHHHHHHHHHhccccccCCceEEEEECCCCHHHHHHHhhhc
Confidence 999999998 7764 4679999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCCCCccCCCcchhHHhhcCceEeeecCchhHHHHHHhcCcceEeecCccccchhhhhhccCCC---CCCChhHH
Q 003188 667 ELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAVAEQVPKLRKEREDGL---FKPDPRFE 743 (840)
Q Consensus 667 Dv~l~iS~a~~EAsGTs~MKam~NGal~i~tlDGanvEi~~~vG~~N~~~fG~~~d~V~~~~~~~~y~~---~~~~~~l~ 743 (840)
||||||||||+||||||||||||||+|||||||||||||.+++|++|+|+||+++++|.+++.. |+| |+.+|+++
T Consensus 616 Dv~l~~S~a~~EAsGTs~MKam~NGaL~iGtLDGanvEi~e~vG~~NgF~FG~~~~ev~~l~~~--y~a~~~y~~~~~~~ 693 (796)
T 2c4m_A 616 DVSEQISTAGKEASGTSNMKFMMNGALTLGTMDGANVEIVDSVGEENAYIFGARVEELPALRES--YKPYELYETVPGLK 693 (796)
T ss_dssp SEEEECCCTTSCSCCHHHHHHHHTTCEEEEESSTHHHHHHHHHCGGGSEEESCCTTTHHHHHHT--CCHHHHHHHSTTHH
T ss_pred ceeecCCCCCCCCCchHHHHHHHcCCeEEeccCCeEeehhhhcCCCcEEEecCchhhHHHHHHh--hChHHHhhcCHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999876 887 46678999
Q ss_pred HHHHHHhcCCCCCCC---hHHHHHHHhhCCCCCCCccccccCChHHHHHHHHHHHHHh-cCHHHHHHHHHHHhccCCCCC
Q 003188 744 EAKQFIRSGAFGSYD---YNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAY-KDQKKWLKMSILSTAGSGKFS 819 (840)
Q Consensus 744 ~v~~~~~~G~f~~~~---~~~l~~~L~~~~~~~~~D~~~~~~Df~~y~~~~~~~~~~Y-~d~~~W~~~~~~n~a~~g~FS 819 (840)
++++.+.+|.|++.+ |.+||++|+...+.+.+|+|||++||+||++||++|.++| +|+++|++|++.|||++|+||
T Consensus 694 ~vvd~~~~g~fs~~~~~~y~~Ly~~L~~~~~~~~~D~~~~~~Df~~y~~~q~~v~~~y~~d~~~W~~~~i~nia~~g~Fs 773 (796)
T 2c4m_A 694 RALDALDNGTLNDNNSGLFYDLKHSLIHGYGKDASDTYYVLGDFADYRETRDRMAADYASDPLGWARMAWINICESGRFS 773 (796)
T ss_dssp HHHHTTTSSSSCCTTCCHHHHHHHHHHSCCGGGCSCTTCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHGGGGB
T ss_pred HHHHHHHcCCCCCCCHHHHHHHHHHHHhcccCCCCCcchhhhhHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHhcCccC
Confidence 999999999997654 9999999974111112699999999999999999999999 999999999999999999999
Q ss_pred hHHHHHHHHHHHhccccccC
Q 003188 820 SDRTIAQYAKEIWNITECRT 839 (840)
Q Consensus 820 sDrti~eYa~~iw~~~~~~~ 839 (840)
|||||+|||++||+++|++.
T Consensus 774 sdRti~eY~~~iw~~~~~~~ 793 (796)
T 2c4m_A 774 SDRTIRDYATEIWKLEPTPA 793 (796)
T ss_dssp HHHHHHHHHHHTTCCCCCCC
T ss_pred chHHHHHHHHHHhCCCCCCc
Confidence 99999999999999999763
No 5
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=100.00 E-value=2.3e-41 Score=390.86 Aligned_cols=474 Identities=16% Similarity=0.180 Sum_probs=325.6
Q ss_pred CCCcccchhhhHhhhhccCCCeEEEeeccCCccceEEeeCCceeeccccccccCCCcccccCCeeEEEEECCeEEEcCCC
Q 003188 138 NGGLGRLASCFLDSMATLNLPAWGYGLRYRYGLFKQKITKQGQEEVAEDWLEKFSPWEVVRHDVVFPVRFFGSVMVNPNG 217 (840)
Q Consensus 138 nGGLGrLAac~ldS~a~l~~p~~G~GlrY~~G~F~Q~i~dG~Q~E~pd~Wl~~~~pwe~~r~~~~~~V~f~g~~~~~~~g 217 (840)
.||||.-++..=++++.+|.-+.-+-=.|.. +.+.+ +. .....+.++++
T Consensus 25 ~GGLadvv~~L~~aL~~~G~~V~Vi~P~Y~~------~~~~~---------------~~---~~~~~~~~~~~------- 73 (536)
T 3vue_A 25 TGGLGDVLGGLPPAMAANGHRVMVISPRYDQ------YKDAW---------------DT---SVVAEIKVADR------- 73 (536)
T ss_dssp SSHHHHHHHHHHHHHHTTTCEEEEEEECCSC------CTTCE---------------EE---EEEEEEEETTE-------
T ss_pred cCcHHHHHHHHHHHHHHcCCeEEEEecCchh------hhhhc---------------cc---ceEEEEEecCc-------
Confidence 7999999999999999999877766555531 11111 10 00112222211
Q ss_pred ceeeeCCeEEEEEEeeeccCCCCCCceEEEEEEEEEcCCCCccccccCcchhhhhHhhhhhhccccccccCCCCc--hhh
Q 003188 218 TRKWVGGEVVQAVAYDIPIPGYKTKNTISLRLWDAKASAEDFNLFQFNDGQYESAAQLHSRAQQICAVLYPGDST--EEG 295 (840)
Q Consensus 218 ~~~w~~~~~v~av~yd~pi~gy~~~~~~~lrLw~a~v~~~~~~l~~~~~~~y~~a~~~~~~~~~It~~LYp~D~~--~~G 295 (840)
...+++|.... +.+++|+++++.|++... . .-...+|++++. +..
T Consensus 74 --------------------------~~~~~~~~~~~--~gv~~y~id~~~~~~r~~----~-~~~~~~Y~~~~~~~~~d 120 (536)
T 3vue_A 74 --------------------------YERVRFFHCYK--RGVDRVFIDHPSFLEKVW----G-KTGEKIYGPDTGVDYKD 120 (536)
T ss_dssp --------------------------EEEEEEEECEE--TTEEEEEEECTTTTCC-----------------------CH
T ss_pred --------------------------eEEEEEEEEEE--CCceEEEecChhhhcccc----c-cCCCcccCCCccCccch
Confidence 23345555432 346677777666654100 0 002457764321 111
Q ss_pred hhhhhhhhhHHHHhHHHHHHHHHHHcccCccccc-CCCceEEEeCCCcccccHHHHHHHHHhhcCCChhHHhhhcCccEE
Q 003188 296 KLLRLKQQFFLCSASLQDMILRFKERKSGRQWSE-FPSKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTVA 374 (840)
Q Consensus 296 k~lRL~Qeyfl~~a~lqdiir~~~~~~g~~~l~~-l~~~~viHlNDtHpalaipElmR~l~d~~~l~~~~A~~i~~~~~v 374 (840)
-..++.||+.|+++.+ +.. ..+....+.. .+.++++|+||||+|++ |-+++......+ . .....+|
T Consensus 121 ---~~~rf~~f~~a~l~~~-~~l-~~~~~~~~~~~~~~ddIiH~hDW~t~l~-~~~l~~~~~~~~-----~--~~~~~~V 187 (536)
T 3vue_A 121 ---NQMRFSLLCQAALEAP-RIL-NLNNNPYFKGTYGEDVVFVCNDWHTGPL-ASYLKNNYQPNG-----I--YRNAKVA 187 (536)
T ss_dssp ---HHHHHHHHHHHHHHHH-HHC-CCCCCTTCCSCCCSCEEEEEESGGGSTH-HHHHHHHTTTTT-----S--STTCEEE
T ss_pred ---HHHHHHHHHHHHHHHH-HHh-ccccchhhhccCCCCEEEEECcchHHHH-HHHHHHhhhhhh-----h--hccccee
Confidence 1237889999998743 221 1110001112 25678999999999998 667776543211 1 1245799
Q ss_pred EeecCChhhhHhhccHHHHHhh-chhHHHHHHHHHHHHHHHHHHhcCCCcccccccccccCCCCCCcccccccccccCCc
Q 003188 375 YTNHTVLPEALEKWSQAVMWKL-LPRHMEIIEEIDKRFIAMVRSTRSDLESKIPSMCILDNNPKKPVVRMANLCVVSAHT 453 (840)
Q Consensus 375 fT~HT~~~eglE~w~~~l~~~l-LPr~~~ii~~in~~f~~~~~~~~~~~~~~~~~~~iie~~~~~~~v~Ma~lai~~S~~ 453 (840)
||+||+.++|. |+.+.+..+ +|.... . ..+.+......+ ..+.+||.+.|+..|+.
T Consensus 188 ~TiHnl~~qg~--~~~~~~~~~~~~~~~~----------~--------~~~~~~~~~~~~---~~~~~n~~k~~i~~ad~ 244 (536)
T 3vue_A 188 FCIHNISYQGR--FAFEDYPELNLSERFR----------S--------SFDFIDGYDTPV---EGRKINWMKAGILEADR 244 (536)
T ss_dssp EEESCTTCCCE--EEGGGGGGGCCCGGGH----------H--------HHEEEETTTSTT---CEEEEEHHHHHHHHCSE
T ss_pred eeecCcccccc--cchhhhhhcCCchhhc----------c--------hhhhhhcccccc---cccchhHHHHHHHhccE
Confidence 99999999998 877766654 332210 0 000011111111 12379999999999999
Q ss_pred ccchhhhhHHHHHhhhhc-C--ccc-cCCCCCcccccccCcccccccCChhhhHHHHhhcCccccccChhhHhhhhccCC
Q 003188 454 VNGVAQLHSDILKADLFA-D--YVS-LWPNKLQNKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLLVGLRQFAD 529 (840)
Q Consensus 454 VNgVS~lH~eilk~~~f~-~--~~~-l~p~k~~~iTNGI~~rrWl~~~NP~l~~li~~~~g~~~w~~~~~~l~~l~~~~~ 529 (840)
|++||+.|++++.+. ++ + +.. ..+.++.+|.||||+..| ||..+..+...+. ..
T Consensus 245 v~tVS~~~a~ei~~~-~~~g~~l~~~~~~~~i~~I~NGiD~~~~----~p~~d~~~~~~~~-----------------~~ 302 (536)
T 3vue_A 245 VLTVSPYYAEELISG-IARGCELDNIMRLTGITGIVNGMDVSEW----DPSKDKYITAKYD-----------------AT 302 (536)
T ss_dssp EEESCHHHHHHHHTT-CCCCSSSCCCSCCCSCEECCCCCCTTTS----CTTTCSSSSCCCC-----------------TT
T ss_pred EEEcCHHHhhhhhcc-cccccccccccccCCeEEEECCcchhhc----CCCCccccccccc-----------------hh
Confidence 999999999887653 33 2 222 236789999999999999 9999888776665 23
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCceEeecccchhhhhhhhhhhHHHHHHHHHhhcCccccCCCCCeEE
Q 003188 530 NTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTI 609 (840)
Q Consensus 530 d~~~~~~~~~~K~~nK~~L~~~i~~~~G~~~dp~~l~d~~vkR~heYKRq~Lnll~ii~~y~~ik~~~p~~~~~~~p~~~ 609 (840)
+ ..+.|..||+.|. +++|+..||+.|++++|.|++++|+.++ ++.++.++.+ . ..++
T Consensus 303 ~------~~~~K~~~k~~l~----~~~gl~~d~~~p~i~~vgRl~~~Kg~~~-li~a~~~l~~--~----------~~~l 359 (536)
T 3vue_A 303 T------AIEAKALNKEALQ----AEAGLPVDRKIPLIAFIGRLEEQKGPDV-MAAAIPELMQ--E----------DVQI 359 (536)
T ss_dssp T------HHHHHHHHHHHHH----HHTTSCCCTTSCEEEEECCBSGGGCHHH-HHHHHHHHTT--S----------SCEE
T ss_pred h------hhhhhHHHHHHHH----HhcCCCCCCCCcEEEEEeeccccCChHH-HHHHHHHhHh--h----------CCeE
Confidence 3 2279999999998 4999999999999999999999999999 9888877632 1 4589
Q ss_pred EEEecCCcCCHHHHHHHHHHHHHHhhhcCCcCCCCcceEEEEcCCCHHHHhhhccCccccccCCCCCccCCCcchhHHhh
Q 003188 610 MIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSL 689 (840)
Q Consensus 610 If~GKA~P~y~~aK~iIk~I~~la~~in~d~~~~~~lkVvFl~nYnvslA~~ii~gaDv~l~iS~a~~EAsGTs~MKam~ 689 (840)
++.|.+.+.+... +...+.. +++ +|.|+..|+.+..+.++++||++++||+ +|+||++.|-||.
T Consensus 360 ~l~G~G~~~~~~~------~~~~~~~------~~~--~v~~~~~~~~~~~~~~~~~aD~~v~PS~--~E~fgl~~lEAma 423 (536)
T 3vue_A 360 VLLGTGKKKFEKL------LKSMEEK------YPG--KVRAVVKFNAPLAHLIMAGADVLAVPSR--FEPCGLIQLQGMR 423 (536)
T ss_dssp EEECCBCHHHHHH------HHHHHHH------STT--TEEEECSCCHHHHHHHHHHCSEEEECCS--CCSSCSHHHHHHH
T ss_pred EEEeccCchHHHH------HHHHHhh------cCC--ceEEEEeccHHHHHHHHHhhheeecccc--cCCCCHHHHHHHH
Confidence 9999998776653 4445543 455 8999999999999999999999999999 9999999999999
Q ss_pred cCceEeeecCchhHHHHHHhcCcceEeecCccccchhhhhhccCCCCCCChhHHHHHHHHhcC-CCCCCChHHHHHHHhh
Q 003188 690 NGCLIIGTLDGANVEIRQEIGEENFFLFGAVAEQVPKLRKEREDGLFKPDPRFEEAKQFIRSG-AFGSYDYNPLLDSLEG 768 (840)
Q Consensus 690 NGal~i~tlDGanvEi~~~vG~~N~~~fG~~~d~V~~~~~~~~y~~~~~~~~l~~v~~~~~~G-~f~~~~~~~l~~~L~~ 768 (840)
.|+++|+|--|...|+++. ++|+|.|+... .+| .|.+.+.++|.++|.
T Consensus 424 ~G~PvI~s~~gG~~e~V~d--g~~G~~~~~~~----------------------------~~g~l~~~~d~~~la~ai~- 472 (536)
T 3vue_A 424 YGTPCACASTGGLVDTVIE--GKTGFHMGRLS----------------------------VDCKVVEPSDVKKVAATLK- 472 (536)
T ss_dssp TTCCEEECSCTHHHHHCCB--TTTEEECCCCC----------------------------SCTTCCCHHHHHHHHHHHH-
T ss_pred cCCCEEEcCCCCchheeeC--CCCccccccCC----------------------------CceeEECCCCHHHHHHHHH-
Confidence 9999999999998887754 57888887543 233 255556788888886
Q ss_pred CCCCCCCccccccCChHHHHHHHHHHHHHhcCHHHHHHHHHHHhccCCCCChHHHHHHHHHH
Q 003188 769 NTGYGRGDYFLVGYDFPSYLEAQDRVDQAYKDQKKWLKMSILSTAGSGKFSSDRTIAQYAKE 830 (840)
Q Consensus 769 ~~~~~~~D~~~~~~Df~~y~~~~~~~~~~Y~d~~~W~~~~~~n~a~~g~FSsDrti~eYa~~ 830 (840)
++...|.++ .|.+++.++|++ +|||++++++|.+-
T Consensus 473 ------------------------ral~~~~~~-~~~~~~~~am~~--~fSW~~~A~~y~~l 507 (536)
T 3vue_A 473 ------------------------RAIKVVGTP-AYEEMVRNCMNQ--DLSWKGPAKNWENV 507 (536)
T ss_dssp ------------------------HHHHHTTSH-HHHHHHHHHHHS--CCSSHHHHHHHHHH
T ss_pred ------------------------HHHHhcCcH-HHHHHHHHHHHh--cCCHHHHHHHHHHH
Confidence 888888655 699999999988 89999999999753
No 6
>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A*
Probab=99.90 E-value=9.3e-23 Score=238.74 Aligned_cols=364 Identities=15% Similarity=0.120 Sum_probs=234.3
Q ss_pred hhhhhHHHHhHHHHHHHHHHHcccCcccccCCCceEEEeCCCcccccHHHHHHHHHhhcCCChhHHhhhcCccEEEeecC
Q 003188 300 LKQQFFLCSASLQDMILRFKERKSGRQWSEFPSKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTVAYTNHT 379 (840)
Q Consensus 300 L~Qeyfl~~a~lqdiir~~~~~~g~~~l~~l~~~~viHlNDtHpalaipElmR~l~d~~~l~~~~A~~i~~~~~vfT~HT 379 (840)
--.+-||+.+.|+.+.. .. . ..|+++|+||||++++ |.++|... ....+|||+|+
T Consensus 160 ~~~F~y~~~avl~~l~~----~~------~-~~pdIiH~HDW~tg~~-~~~Lk~~~-------------~~i~tVfTiH~ 214 (725)
T 3nb0_A 160 AILLGYTVAWFLGEVAH----LD------S-QHAIVAHFHEWLAGVA-LPLCRKRR-------------IDVVTIFTTHA 214 (725)
T ss_dssp HHHHHHHHHHHHHHHHH----HC------C-SEEEEEEEESGGGCTH-HHHHHHTT-------------CSCEEEEEESS
T ss_pred HHHHHHHHHHHHHHHHh----cC------C-CCCcEEEeCchhhhHH-HHHHHHhC-------------CCCCEEEEEec
Confidence 34888999998876421 11 1 3589999999999998 56777421 34679999999
Q ss_pred Ch---h---hhHhhccHH-HHHhhchhHHHHHHHHHHHHHHHHHHhcCCCcccccccccccCCCCCCcccccccccccCC
Q 003188 380 VL---P---EALEKWSQA-VMWKLLPRHMEIIEEIDKRFIAMVRSTRSDLESKIPSMCILDNNPKKPVVRMANLCVVSAH 452 (840)
Q Consensus 380 ~~---~---eglE~w~~~-l~~~lLPr~~~ii~~in~~f~~~~~~~~~~~~~~~~~~~iie~~~~~~~v~Ma~lai~~S~ 452 (840)
.. . ||. ||.. .++ .++.+++.. .+.+ ++.++|.+.|++.|+
T Consensus 215 telGR~lagqg~--~~~y~~L~-----------------------~~~~d~ea~-~~~i------~~~~~~EKaga~~AD 262 (725)
T 3nb0_A 215 TLLGRYLCASGS--FDFYNCLE-----------------------SVDVDHEAG-RFGI------YHRYCIERAAAHSAD 262 (725)
T ss_dssp CHHHHHHTSSSC--SCHHHHGG-----------------------GCCHHHHHH-HTTC------HHHHHHHHHHHHHSS
T ss_pred chhhhhhhhcCC--Cchhhhhh-----------------------hcCCChhhh-hhch------hHHHHHHHHHHHhCC
Confidence 86 2 454 4322 111 112111100 1111 236899999999999
Q ss_pred cccchhhhhHHHHHhhhhcCccccCCCCCcccccccCcccccccCChhhhHHHHhhcCccccccChhhHhhhhccCCCHH
Q 003188 453 TVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLLVGLRQFADNTE 532 (840)
Q Consensus 453 ~VNgVS~lH~eilk~~~f~~~~~l~p~k~~~iTNGI~~rrWl~~~NP~l~~li~~~~g~~~w~~~~~~l~~l~~~~~d~~ 532 (840)
.|++||+.+++++++ .+ ..-|+++ |.|||++..| ||. . +
T Consensus 263 ~ITTVS~~yA~Ei~~-Ll----~r~~d~i--IpNGID~~~f----~p~---------~---------------------~ 301 (725)
T 3nb0_A 263 VFTTVSQITAFEAEH-LL----KRKPDGI--LPNGLNVIKF----QAF---------H---------------------E 301 (725)
T ss_dssp EEEESSHHHHHHHHH-HT----SSCCSEE--CCCCBCCCCC----SST---------T---------------------H
T ss_pred EEEECCHHHHHHHHH-Hh----cCCCCEE--EcCCcccccc----Ccc---------h---------------------h
Confidence 999999999999985 22 2234444 9999999999 663 0 1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhC--CCCC-CCCceEeecccch-hhhhhhhhhhHHHHHHHHHhhcCccccCCCCCeE
Q 003188 533 LQAEWESAKMASKKHLADYIWRVTG--VTID-PNSLFDIQVKRIH-EYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRT 608 (840)
Q Consensus 533 ~~~~~~~~K~~nK~~L~~~i~~~~G--~~~d-p~~l~d~~vkR~h-eYKRq~Lnll~ii~~y~~ik~~~p~~~~~~~p~~ 608 (840)
+.+.|..+|++|.+.++.+++ +.++ ++.++...+.|+. ++|+.+| +++++.++.+....... +.+=+.
T Consensus 302 ----~~~~k~~aK~klq~~l~~~~~~~l~l~~dk~liifivgRle~~nKGiDl-~ieAl~~L~~~l~~~~~---~~~vva 373 (725)
T 3nb0_A 302 ----FQNLHALKKEKINDFVRGHFHGCFDFDLDNTLYFFIAGRYEYKNKGADM-FIEALARLNYRLKVSGS---KKTVVA 373 (725)
T ss_dssp ----HHHHHHHHHHHHHHHHHHHTTTCCCSCGGGEEEEEEESSCCTTTTTHHH-HHHHHHHHHHHHHHTTC---CCEEEE
T ss_pred ----hHHHHHHHHHHHHHHHHhhcccCCCCCCCceeEEEEEEEeccccCCHHH-HHHHHHHHHHHHhhccC---CCcEEE
Confidence 337889999999998888775 5676 4567777899999 8999999 99999999865220111 122355
Q ss_pred EEEEecCCcCCH-----------------------HHHHHHHHHH--------------------------------HHH
Q 003188 609 IMIGGKAFATYT-----------------------NAKRIVKLVN--------------------------------DVG 633 (840)
Q Consensus 609 ~If~GKA~P~y~-----------------------~aK~iIk~I~--------------------------------~la 633 (840)
||+..-+.-++. .||.+..... +..
T Consensus 374 fii~p~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~~~~~~lkr~~~~~~ 453 (725)
T 3nb0_A 374 FIVMPAKNNSFTVEALKGQAEVRALENTVHEVTTSIGKRIFDHAIRYPHNGLTTELPTDLGELLKSSDKVMLKRRILALR 453 (725)
T ss_dssp EEECCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTCCSSSCCCHHHHCCHHHHHHHHHHHHHHC
T ss_pred EEEeCCCCCCCchhhhcchhHHHHHHHHHHHHHHHHhHHHHHHHhcccccccCCCCCCCHHHhcChHHHHHHHHHHHhhc
Confidence 565554443332 1111111111 000
Q ss_pred --------------------------hhhcCCcCCCCcceEEEEcCCCHHH-------HhhhccCccccccCCCCCccCC
Q 003188 634 --------------------------EVVNTDPEVNSYLKVVFVPNYNVSV-------AELLIPGSELSQHISTAGMEAS 680 (840)
Q Consensus 634 --------------------------~~in~d~~~~~~lkVvFl~nYnvsl-------A~~ii~gaDv~l~iS~a~~EAs 680 (840)
+.++=...-.++.||+|+|.|=-.. -..++++||++..||+ +|++
T Consensus 454 ~~~~~lpp~~TH~~~~~~~D~Il~~~r~l~L~N~~~drVKVIf~P~~L~~~d~lf~~d~~~~~~~advfV~PS~--~Egf 531 (725)
T 3nb0_A 454 RPEGQLPPIVTHNMVDDANDLILNKIRQVQLFNSPSDRVKMIFHPEFLNANNPILGLDYDEFVRGCHLGVFPSY--YEPW 531 (725)
T ss_dssp CCTTCCCCSBSEEETTGGGCHHHHHHHHHTCCCCTTCSEEEEECCSCCCTTCSSSCCCHHHHHHHCSEEECCCS--SBSS
T ss_pred cCCCCCCCeeeeecccCCccHHHHHHHhcCCCCCcCCceeEEEeccccCCCCccchhHHHHHHhhceEEEeccc--cCCC
Confidence 0011111234789999999986653 3567899999999999 9999
Q ss_pred CcchhHHhhcCceEeeecCchhHHHHHHhcCcceEeecCccccchhhhhhccCCCCCCChhHHHHHHHHhcCC-C---CC
Q 003188 681 GTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAVAEQVPKLRKEREDGLFKPDPRFEEAKQFIRSGA-F---GS 756 (840)
Q Consensus 681 GTs~MKam~NGal~i~tlDGanvEi~~~vG~~N~~~fG~~~d~V~~~~~~~~y~~~~~~~~l~~v~~~~~~G~-f---~~ 756 (840)
|...|-||..|++.|+|--|.--|++.+..+ . . +...+|. | .+
T Consensus 532 Gl~~LEAmA~G~PvI~s~~gG~~d~V~dg~~--------------~-~------------------~~~~tG~lV~~rd~ 578 (725)
T 3nb0_A 532 GYTPAECTVMGVPSITTNVSGFGSYMEDLIE--------------T-N------------------QAKDYGIYIVDRRF 578 (725)
T ss_dssp CHHHHHHHHTTCCEEEETTBHHHHHHHTTSC--------------H-H------------------HHHHTTEEEECCSS
T ss_pred CHHHHHHHHcCCCEEEeCCCChhhhhhcccc--------------c-c------------------CCCCceEEEeCCCC
Confidence 9999999999999998855554444433211 0 0 0123453 3 23
Q ss_pred CChHHHHHHHhhCCCCCCCccccccCChHHHHHHHHHHHHHhc--CHHHHHHHHHHHhccCCCCChHHHHHHHHH
Q 003188 757 YDYNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYK--DQKKWLKMSILSTAGSGKFSSDRTIAQYAK 829 (840)
Q Consensus 757 ~~~~~l~~~L~~~~~~~~~D~~~~~~Df~~y~~~~~~~~~~Y~--d~~~W~~~~~~n~a~~g~FSsDrti~eYa~ 829 (840)
++++++.++|. ++...|. ++..+.++...+...+-.|||++++++|.+
T Consensus 579 ~d~ee~aeaLa-------------------------~aL~~f~~~d~~~r~~mr~~ar~~A~~FSWe~iA~~Yl~ 628 (725)
T 3nb0_A 579 KAPDESVEQLV-------------------------DYMEEFVKKTRRQRINQRNATEALSDLLDWKRMGLEYVK 628 (725)
T ss_dssp SCHHHHHHHHH-------------------------HHHHHHHTCCHHHHHHHHHHHHHGGGGGBHHHHHHHHHH
T ss_pred CCHHHHHHHHH-------------------------HHHHHHHhCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 44677777775 5555554 444444555444223348999999999976
No 7
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=99.72 E-value=4.9e-17 Score=181.90 Aligned_cols=339 Identities=17% Similarity=0.170 Sum_probs=223.6
Q ss_pred CCceEEEeCCCcccccHHHHHHHHHhhcCCChhHHhhhcCccEEEeecCChhhhHhhccHHHHHhhchhHHHHHHHHHHH
Q 003188 331 PSKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEALEKWSQAVMWKLLPRHMEIIEEIDKR 410 (840)
Q Consensus 331 ~~~~viHlNDtHpalaipElmR~l~d~~~l~~~~A~~i~~~~~vfT~HT~~~eglE~w~~~l~~~lLPr~~~ii~~in~~ 410 (840)
.+|++||+|+++++++ +.+++. ...+..+++|.|+..+++. ++...+..
T Consensus 128 ~~~Divh~~~~~~~~~-~~~~~~-------------~~~~~p~v~t~H~~~~~~~--~~~~~~~~--------------- 176 (485)
T 2qzs_A 128 WRPDVVHAHDWHAGLA-PAYLAA-------------RGRPAKSVFTVHNLAYQGM--FYAHHMND--------------- 176 (485)
T ss_dssp CCCSEEEEETGGGTTH-HHHHHH-------------TTCSSEEEEEESCTTCCCE--EEGGGGGT---------------
T ss_pred CCCCEEEeeccchhHH-HHHHhh-------------ccCCCCEEEEecCccccCC--CCHHHHHh---------------
Confidence 4689999999998875 444331 0134568999999876654 33322211
Q ss_pred HHHHHHHhcCCCcccccccccccCCCCCCcccccccccccCCcccchhhhhHHHHHhhhhc-Ccccc---CC--CCCccc
Q 003188 411 FIAMVRSTRSDLESKIPSMCILDNNPKKPVVRMANLCVVSAHTVNGVAQLHSDILKADLFA-DYVSL---WP--NKLQNK 484 (840)
Q Consensus 411 f~~~~~~~~~~~~~~~~~~~iie~~~~~~~v~Ma~lai~~S~~VNgVS~lH~eilk~~~f~-~~~~l---~p--~k~~~i 484 (840)
.+.....+. ....+. .....+.+.++..++.|.+||+-..+.+++..|+ +...+ .+ .++.-|
T Consensus 177 --------~~~~~~~~~-~~~~~~---~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi 244 (485)
T 2qzs_A 177 --------IQLPWSFFN-IHGLEF---NGQISFLKAGLYYADHITAVSPTYAREITEPQFAYGMEGLLQQRHREGRLSGV 244 (485)
T ss_dssp --------TTCCGGGCS-TTTTEE---TTEEEHHHHHHHHCSEEEESSHHHHHHTTSHHHHTTCHHHHHHHHHTTCEEEC
T ss_pred --------cCCCchhcc-cccccc---cccccHHHHHHHhcCeEEecCHHHHHHHhccccCcchHHHHHhhccCCceEEE
Confidence 111111010 000000 0134566778889999999999887776542232 11111 13 688889
Q ss_pred ccccCcccccccCChhhhHHHHhhcCccccccChhhHhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCC
Q 003188 485 TNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLLVGLRQFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNS 564 (840)
Q Consensus 485 TNGI~~rrWl~~~NP~l~~li~~~~g~~~w~~~~~~l~~l~~~~~d~~~~~~~~~~K~~nK~~L~~~i~~~~G~~~dp~~ 564 (840)
-|||+...| +|..+..+...++ .++ + ..|..+|..+. +++|++-+++.
T Consensus 245 ~ngvd~~~~----~~~~~~~~~~~~~-----------------~~~------~-~~~~~~~~~~r----~~~~~~~~~~~ 292 (485)
T 2qzs_A 245 LNGVDEKIW----SPETDLLLASRYT-----------------RDT------L-EDKAENKRQLQ----IAMGLKVDDKV 292 (485)
T ss_dssp CCCCCTTTS----CTTTCTTSSSCCC-----------------TTC------G-GGGHHHHHHHH----HHHTCCCCTTS
T ss_pred ecCCCcccc----Ccccccccccccc-----------------ccc------h-hHHHHhHHHHH----HHcCCCCCCCC
Confidence 999999998 5654433333343 233 3 35555665554 57887655578
Q ss_pred ceEeecccchhhhhhhhhhhHHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcCCCC
Q 003188 565 LFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNS 644 (840)
Q Consensus 565 l~d~~vkR~heYKRq~Lnll~ii~~y~~ik~~~p~~~~~~~p~~~If~GKA~P~y~~aK~iIk~I~~la~~in~d~~~~~ 644 (840)
+.++++.|+..+|+.++ ++.++.++.+ . ++++++.|.+.+.+.. .+.++++. .++
T Consensus 293 ~~i~~vGrl~~~Kg~~~-li~a~~~l~~--~----------~~~l~ivG~g~~~~~~------~l~~~~~~------~~~ 347 (485)
T 2qzs_A 293 PLFAVVSRLTSQKGLDL-VLEALPGLLE--Q----------GGQLALLGAGDPVLQE------GFLAAAAE------YPG 347 (485)
T ss_dssp CEEEEEEEESGGGCHHH-HHHHHHHHHH--T----------TCEEEEEEEECHHHHH------HHHHHHHH------STT
T ss_pred eEEEEeccCccccCHHH-HHHHHHHHhh--C----------CcEEEEEeCCchHHHH------HHHHHHHh------CCC
Confidence 99999999999999999 8888777643 1 5789999987653332 34444443 234
Q ss_pred cceEEEEcCCCHHHHhhhccCccccccCCCCCccCCCcchhHHhhcCceEeeecCchhHHHHHHhcCcceEeecCccccc
Q 003188 645 YLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAVAEQV 724 (840)
Q Consensus 645 ~lkVvFl~nYnvslA~~ii~gaDv~l~iS~a~~EAsGTs~MKam~NGal~i~tlDGanvEi~~~vG~~N~~~fG~~~d~V 724 (840)
+|+|+.+|.-.....++++||++..||+ .|++|+.-+-||..|.+.|+|-.|..-|+++.... +.
T Consensus 348 --~v~~~~g~~~~~~~~~~~~adv~v~pS~--~E~~g~~~lEAma~G~PvI~s~~gg~~e~v~~~~~----------~~- 412 (485)
T 2qzs_A 348 --QVGVQIGYHEAFSHRIMGGADVILVPSR--FEPCGLTQLYGLKYGTLPLVRRTGGLADTVSDCSL----------EN- 412 (485)
T ss_dssp --TEEEEESCCHHHHHHHHHHCSEEEECCS--CCSSCSHHHHHHHHTCEEEEESSHHHHHHCCBCCH----------HH-
T ss_pred --cEEEeCCCCHHHHHHHHHhCCEEEECCc--cCCCcHHHHHHHHCCCCEEECCCCCccceeccCcc----------cc-
Confidence 7888888887777899999999999999 99999999999999999999977776554422100 00
Q ss_pred hhhhhhccCCCCCCChhHHHHHHHHhcCC-CCCCChHHHHHHHhhCCCCCCCccccccCChHHHHHHHHHHHHHhcCHHH
Q 003188 725 PKLRKEREDGLFKPDPRFEEAKQFIRSGA-FGSYDYNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYKDQKK 803 (840)
Q Consensus 725 ~~~~~~~~y~~~~~~~~l~~v~~~~~~G~-f~~~~~~~l~~~L~~~~~~~~~D~~~~~~Df~~y~~~~~~~~~~Y~d~~~ 803 (840)
... ...+|. +.+.+.++|.++|. ++...|.|++.
T Consensus 413 --~~~------------------~~~~G~l~~~~d~~~la~~i~-------------------------~ll~~~~~~~~ 447 (485)
T 2qzs_A 413 --LAD------------------GVASGFVFEDSNAWSLLRAIR-------------------------RAFVLWSRPSL 447 (485)
T ss_dssp --HHT------------------TCCCBEEECSSSHHHHHHHHH-------------------------HHHHHHTSHHH
T ss_pred --ccc------------------cccceEEECCCCHHHHHHHHH-------------------------HHHHHcCCHHH
Confidence 000 002332 33445677777775 66666789999
Q ss_pred HHHHHHHHhccCCCCChHHHHHHHHHHH
Q 003188 804 WLKMSILSTAGSGKFSSDRTIAQYAKEI 831 (840)
Q Consensus 804 W~~~~~~n~a~~g~FSsDrti~eYa~~i 831 (840)
|.++..++... .|||++++++|.+-.
T Consensus 448 ~~~~~~~~~~~--~fs~~~~~~~~~~ly 473 (485)
T 2qzs_A 448 WRFVQRQAMAM--DFSWQVAAKSYRELY 473 (485)
T ss_dssp HHHHHHHHHHC--CCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHhh--cCCHHHHHHHHHHHH
Confidence 99998888764 899999999997643
No 8
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=99.72 E-value=2.4e-17 Score=184.30 Aligned_cols=333 Identities=17% Similarity=0.183 Sum_probs=224.6
Q ss_pred CCceEEEeCCCcccccHHHHHHHHHhhcCCChhHHhhhcCccEEEeecCChhhhHhhccHHHHHhhchhHHHHHHHHHHH
Q 003188 331 PSKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEALEKWSQAVMWKLLPRHMEIIEEIDKR 410 (840)
Q Consensus 331 ~~~~viHlNDtHpalaipElmR~l~d~~~l~~~~A~~i~~~~~vfT~HT~~~eglE~w~~~l~~~lLPr~~~ii~~in~~ 410 (840)
.+|++||+|+++++++ +.+++.+ ...+..+++|.|+..+++. ++...+..
T Consensus 129 ~~~DiIh~~~~~~~~~-~~~~~~~------------~~~~~p~v~t~H~~~~~~~--~~~~~~~~--------------- 178 (485)
T 1rzu_A 129 WRPDMVHAHDWQAAMT-PVYMRYA------------ETPEIPSLLTIHNIAFQGQ--FGANIFSK--------------- 178 (485)
T ss_dssp CCCSEEEEEHHHHTTH-HHHHHHS------------SSCCCCEEEEESCTTCCCE--ECGGGGGG---------------
T ss_pred CCCCEEEecccchhHH-HHHHhhc------------ccCCCCEEEEecCccccCC--CCHHHHhh---------------
Confidence 4689999999998876 4444431 0134568999999877654 43322221
Q ss_pred HHHHHHHhcCCCcccccccccccCCCCCCcccccccccccCCcccchhhhhHHHHHhhhhc-Cc---cccCCCCCccccc
Q 003188 411 FIAMVRSTRSDLESKIPSMCILDNNPKKPVVRMANLCVVSAHTVNGVAQLHSDILKADLFA-DY---VSLWPNKLQNKTN 486 (840)
Q Consensus 411 f~~~~~~~~~~~~~~~~~~~iie~~~~~~~v~Ma~lai~~S~~VNgVS~lH~eilk~~~f~-~~---~~l~p~k~~~iTN 486 (840)
.+.....+. ...... ....++.+.++..++.|.+||+-..+.+++..|+ ++ ....+.++.-|.|
T Consensus 179 --------~~~~~~~~~-~~~~~~---~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~g~~~~~~~~~~~~~~~vi~n 246 (485)
T 1rzu_A 179 --------LALPAHAFG-MEGIEY---YNDVSFLKGGLQTATALSTVSPSYAEEILTAEFGMGLEGVIGSRAHVLHGIVN 246 (485)
T ss_dssp --------SCCCGGGSS-TTTTEE---TTEEEHHHHHHHHCSEEEESCHHHHHHTTSHHHHTTCHHHHHTTGGGEEECCC
T ss_pred --------cCCChhhcc-cccccc---cccccHHHHHHhhcCEEEecCHhHHHHHhccccCcchHHHHHhhcCCceEEcC
Confidence 111111010 000000 0124566778889999999999888777642232 11 1234678889999
Q ss_pred ccCcccccccCChhhhHHHHhhcCccccccChhhHhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCce
Q 003188 487 GITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLLVGLRQFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLF 566 (840)
Q Consensus 487 GI~~rrWl~~~NP~l~~li~~~~g~~~w~~~~~~l~~l~~~~~d~~~~~~~~~~K~~nK~~L~~~i~~~~G~~~dp~~l~ 566 (840)
||+...| +|..+..+...++ .++ + ..|..+|..+. +++|++-++ .+.
T Consensus 247 gvd~~~~----~~~~~~~~~~~~~-----------------~~~------~-~~~~~~~~~~r----~~~~~~~~~-~~~ 293 (485)
T 1rzu_A 247 GIDADVW----NPATDHLIHDNYS-----------------AAN------L-KNRALNKKAVA----EHFRIDDDG-SPL 293 (485)
T ss_dssp CBCTTTS----CTTTCTTSSSCCB-----------------TTB------C-TTHHHHHHHHH----HHHTCCCSS-SCE
T ss_pred CCccccc----CCccccccccccc-----------------ccc------h-hhHHHhHHHHH----HhcCCCCCC-CeE
Confidence 9999988 5654333333333 222 3 35566666654 577876332 568
Q ss_pred EeecccchhhhhhhhhhhHHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcCCCCcc
Q 003188 567 DIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYL 646 (840)
Q Consensus 567 d~~vkR~heYKRq~Lnll~ii~~y~~ik~~~p~~~~~~~p~~~If~GKA~P~y~~aK~iIk~I~~la~~in~d~~~~~~l 646 (840)
++++.|+..+|+.++ ++.++.++.+ . +.++++.|.+.+.+.. .+.++++. .++
T Consensus 294 i~~vGrl~~~Kg~~~-li~a~~~l~~--~----------~~~l~ivG~g~~~~~~------~l~~~~~~------~~~-- 346 (485)
T 1rzu_A 294 FCVISRLTWQKGIDL-MAEAVDEIVS--L----------GGRLVVLGAGDVALEG------ALLAAASR------HHG-- 346 (485)
T ss_dssp EEEESCBSTTTTHHH-HHTTHHHHHH--T----------TCEEEEEECBCHHHHH------HHHHHHHH------TTT--
T ss_pred EEEEccCccccCHHH-HHHHHHHHHh--c----------CceEEEEeCCchHHHH------HHHHHHHh------CCC--
Confidence 999999999999999 9888877643 1 5789999998643332 34555543 234
Q ss_pred eEEEEcCCCHHHHhhhccCccccccCCCCCccCCCcchhHHhhcCceEeeecCchhHHHHHHh-------cCcceEeecC
Q 003188 647 KVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEI-------GEENFFLFGA 719 (840)
Q Consensus 647 kVvFl~nYnvslA~~ii~gaDv~l~iS~a~~EAsGTs~MKam~NGal~i~tlDGanvEi~~~v-------G~~N~~~fG~ 719 (840)
+|.|+.+|.-.....++++||++..||+ .|++|+.-+-||..|.+.|+|-.|..-|+++.. |++|+++
T Consensus 347 ~v~~~~g~~~~~~~~~~~~adv~v~pS~--~E~~~~~~lEAma~G~PvI~s~~gg~~e~v~~~~~~~~~~~~~~G~l--- 421 (485)
T 1rzu_A 347 RVGVAIGYNEPLSHLMQAGCDAIIIPSR--FEPCGLTQLYALRYGCIPVVARTGGLADTVIDANHAALASKAATGVQ--- 421 (485)
T ss_dssp TEEEEESCCHHHHHHHHHHCSEEEECCS--CCSSCSHHHHHHHHTCEEEEESSHHHHHHCCBCCHHHHHTTCCCBEE---
T ss_pred cEEEecCCCHHHHHHHHhcCCEEEECcc--cCCCCHHHHHHHHCCCCEEEeCCCChhheecccccccccccCCcceE---
Confidence 7888889988887899999999999999 899999999999999999999887765544221 0022222
Q ss_pred ccccchhhhhhccCCCCCCChhHHHHHHHHhcCCCCCCChHHHHHHHhhCCCCCCCccccccCChHHHHHHHHHHHHHhc
Q 003188 720 VAEQVPKLRKEREDGLFKPDPRFEEAKQFIRSGAFGSYDYNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYK 799 (840)
Q Consensus 720 ~~d~V~~~~~~~~y~~~~~~~~l~~v~~~~~~G~f~~~~~~~l~~~L~~~~~~~~~D~~~~~~Df~~y~~~~~~~~~~Y~ 799 (840)
+.+.+.++|.++|. ++...|.
T Consensus 422 ----------------------------------~~~~d~~~la~~i~-------------------------~ll~~~~ 442 (485)
T 1rzu_A 422 ----------------------------------FSPVTLDGLKQAIR-------------------------RTVRYYH 442 (485)
T ss_dssp ----------------------------------ESSCSHHHHHHHHH-------------------------HHHHHHT
T ss_pred ----------------------------------eCCCCHHHHHHHHH-------------------------HHHHHhC
Confidence 33445677777775 6666778
Q ss_pred CHHHHHHHHHHHhccCCCCChHHHHHHHHHHH
Q 003188 800 DQKKWLKMSILSTAGSGKFSSDRTIAQYAKEI 831 (840)
Q Consensus 800 d~~~W~~~~~~n~a~~g~FSsDrti~eYa~~i 831 (840)
|++.|.++..++.+. .|||++++++|.+-.
T Consensus 443 ~~~~~~~~~~~~~~~--~fs~~~~~~~~~~~y 472 (485)
T 1rzu_A 443 DPKLWTQMQKLGMKS--DVSWEKSAGLYAALY 472 (485)
T ss_dssp CHHHHHHHHHHHHTC--CCBHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHH--hCChHHHHHHHHHHH
Confidence 999999999888764 899999999997543
No 9
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=99.51 E-value=4.8e-13 Score=145.56 Aligned_cols=307 Identities=17% Similarity=0.151 Sum_probs=206.0
Q ss_pred CCceEEEeCCCcccccHHHHHHHHHhhcCCChhHHhhhcCccEEEeecCChhhhHhhccHHHHHhhchhHHHHHHHHHHH
Q 003188 331 PSKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEALEKWSQAVMWKLLPRHMEIIEEIDKR 410 (840)
Q Consensus 331 ~~~~viHlNDtHpalaipElmR~l~d~~~l~~~~A~~i~~~~~vfT~HT~~~eglE~w~~~l~~~lLPr~~~ii~~in~~ 410 (840)
.+|++||+|+++++++ +.+++.. .+..+++|.|+..+.++ +...+..
T Consensus 121 ~~~Dii~~~~~~~~~~-~~~~~~~--------------~~~~~v~~~h~~~~~~~---~~~~~~~--------------- 167 (439)
T 3fro_A 121 PLPDVVHFHDWHTVFA-GALIKKY--------------FKIPAVFTIHRLNKSKL---PAFYFHE--------------- 167 (439)
T ss_dssp CCCSEEEEESGGGHHH-HHHHHHH--------------HCCCEEEEESCCCCCCE---EHHHHHH---------------
T ss_pred CCCeEEEecchhhhhh-HHHHhhc--------------cCCCEEEEecccccccC---chHHhCc---------------
Confidence 5789999999998876 4454432 33569999999987653 3333221
Q ss_pred HHHHHHHhcCCCcccccccccccCCCCCCcccccccccccCCcccchhhhhHHHHHhhhhcCccccCCCCCcccccccCc
Q 003188 411 FIAMVRSTRSDLESKIPSMCILDNNPKKPVVRMANLCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITP 490 (840)
Q Consensus 411 f~~~~~~~~~~~~~~~~~~~iie~~~~~~~v~Ma~lai~~S~~VNgVS~lH~eilk~~~f~~~~~l~p~k~~~iTNGI~~ 490 (840)
.. +.... ......+...++..++.|.+||+-+.+... ++....+.++.-|-|||+.
T Consensus 168 --------~~-----~~~~~------~~~~~~~~~~~~~~ad~ii~~S~~~~~~~~-----~~~~~~~~~i~vi~ngvd~ 223 (439)
T 3fro_A 168 --------AG-----LSELA------PYPDIDPEHTGGYIADIVTTVSRGYLIDEW-----GFFRNFEGKITYVFNGIDC 223 (439)
T ss_dssp --------TT-----CGGGC------CSSEECHHHHHHHHCSEEEESCHHHHHHTH-----HHHGGGTTSEEECCCCCCT
T ss_pred --------cc-----ccccc------ccceeeHhhhhhhhccEEEecCHHHHHHHh-----hhhhhcCCceeecCCCCCc
Confidence 00 00000 012457778888899999999998776522 1334557889999999999
Q ss_pred ccccccCChhhhHHHHhhcCccccccChhhHhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCceEeec
Q 003188 491 RRWLRFCNPELSKIITKWLKTDQWVTNLDLLVGLRQFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQV 570 (840)
Q Consensus 491 rrWl~~~NP~l~~li~~~~g~~~w~~~~~~l~~l~~~~~d~~~~~~~~~~K~~nK~~L~~~i~~~~G~~~dp~~l~d~~v 570 (840)
..| +|.. +. . .+...|..+. +++|+ +++ +.++++
T Consensus 224 ~~~----~~~~-------~~------------------~----------~~~~~~~~~~----~~~~~--~~~-~~i~~~ 257 (439)
T 3fro_A 224 SFW----NESY-------LT------------------G----------SRDERKKSLL----SKFGM--DEG-VTFMFI 257 (439)
T ss_dssp TTS----CGGG-------SC------------------S----------CHHHHHHHHH----HHHTC--CSC-EEEEEE
T ss_pred hhc----Cccc-------cc------------------c----------hhhhhHHHHH----HHcCC--CCC-cEEEEE
Confidence 988 4531 11 0 1122333333 46676 456 999999
Q ss_pred ccch-hhhhhhhhhhHHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcCCCCcceEE
Q 003188 571 KRIH-EYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYLKVV 649 (840)
Q Consensus 571 kR~h-eYKRq~Lnll~ii~~y~~ik~~~p~~~~~~~p~~~If~GKA~P~y~~aK~iIk~I~~la~~in~d~~~~~~lkVv 649 (840)
.|+. .+|+.++ ++..+.++.+- .+ ..+.++++.|.+.+.|.. .+.++++. .++ ++
T Consensus 258 G~~~~~~Kg~~~-li~a~~~l~~~---~~-----~~~~~l~i~G~g~~~~~~------~l~~~~~~------~~~---~~ 313 (439)
T 3fro_A 258 GRFDRGQKGVDV-LLKAIEILSSK---KE-----FQEMRFIIIGKGDPELEG------WARSLEEK------HGN---VK 313 (439)
T ss_dssp CCSSCTTBCHHH-HHHHHHHHHTS---GG-----GGGEEEEEECCCCHHHHH------HHHHHHHH------CTT---EE
T ss_pred cccccccccHHH-HHHHHHHHHhc---cc-----CCCeEEEEEcCCChhHHH------HHHHHHhh------cCC---EE
Confidence 9999 9999999 98888776541 10 026899999988765543 35555553 223 55
Q ss_pred EEcC-CCHHHHhhhccCccccccCCCCCccCCCcchhHHhhcCceEeeecCchhHHHHHHhcCcceEeecCccccchhhh
Q 003188 650 FVPN-YNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAVAEQVPKLR 728 (840)
Q Consensus 650 Fl~n-YnvslA~~ii~gaDv~l~iS~a~~EAsGTs~MKam~NGal~i~tlDGanvEi~~~vG~~N~~~fG~~~d~V~~~~ 728 (840)
++.+ ..-+-...++.+||+...||+ .|++|++-+-||..|.+.|+|-.|..-|+++ +.+++++
T Consensus 314 ~~~g~~~~~~~~~~~~~adv~v~ps~--~e~~~~~~~EAma~G~Pvi~s~~~~~~e~~~---~~~g~~~----------- 377 (439)
T 3fro_A 314 VITEMLSREFVRELYGSVDFVIIPSY--FEPFGLVALEAMCLGAIPIASAVGGLRDIIT---NETGILV----------- 377 (439)
T ss_dssp EECSCCCHHHHHHHHTTCSEEEECBS--CCSSCHHHHHHHHTTCEEEEESSTHHHHHCC---TTTCEEE-----------
T ss_pred EEcCCCCHHHHHHHHHHCCEEEeCCC--CCCccHHHHHHHHCCCCeEEcCCCCcceeEE---cCceEEe-----------
Confidence 5555 777778889999999999999 7999999999999999999997777655442 1144433
Q ss_pred hhccCCCCCCChhHHHHHHHHhcCCCCCCChHHHHHHHhhCCCCCCCccccccCChHHHHHHHHHHHHHhc-CHHHHHHH
Q 003188 729 KEREDGLFKPDPRFEEAKQFIRSGAFGSYDYNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYK-DQKKWLKM 807 (840)
Q Consensus 729 ~~~~y~~~~~~~~l~~v~~~~~~G~f~~~~~~~l~~~L~~~~~~~~~D~~~~~~Df~~y~~~~~~~~~~Y~-d~~~W~~~ 807 (840)
.+.+.+++.++|. + +.. |++.+.++
T Consensus 378 --------------------------~~~d~~~la~~i~-------------------------~---ll~~~~~~~~~~ 403 (439)
T 3fro_A 378 --------------------------KAGDPGELANAIL-------------------------K---ALELSRSDLSKF 403 (439)
T ss_dssp --------------------------CTTCHHHHHHHHH-------------------------H---HHHHTTTTTHHH
T ss_pred --------------------------CCCCHHHHHHHHH-------------------------H---HHhcCHHHHHHH
Confidence 2233555555553 2 233 56666777
Q ss_pred HHHHhccCCCCChHHHHHHHHHHHhcc
Q 003188 808 SILSTAGSGKFSSDRTIAQYAKEIWNI 834 (840)
Q Consensus 808 ~~~n~a~~g~FSsDrti~eYa~~iw~~ 834 (840)
..++....-.|||++.+++|.+-+=.+
T Consensus 404 ~~~~~~~~~~~s~~~~~~~~~~~~~~~ 430 (439)
T 3fro_A 404 RENCKKRAMSFSWEKSAERYVKAYTGS 430 (439)
T ss_dssp HHHHHHHHHTSCHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHhhCcHHHHHHHHHHHHHHH
Confidence 666655333699999999998865444
No 10
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=99.35 E-value=4.2e-12 Score=153.42 Aligned_cols=192 Identities=15% Similarity=0.117 Sum_probs=138.6
Q ss_pred HhCCCCCCCCceEeecccchhhhhhhhhhhHHHHHHHHHhhcCccccCCCCCeEEEEEecCCc---CCHHHHHHHHHHHH
Q 003188 555 VTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFA---TYTNAKRIVKLVND 631 (840)
Q Consensus 555 ~~G~~~dp~~l~d~~vkR~heYKRq~Lnll~ii~~y~~ik~~~p~~~~~~~p~~~If~GKA~P---~y~~aK~iIk~I~~ 631 (840)
.+|+..+++.+.++++.|+..+|+.++ ++.++.++.+.. | ++.+++.|.+.+ .+...+...+.+.+
T Consensus 563 ~lg~l~~~~~~vIl~vGRl~~~KGid~-LIeA~~~L~~~~---~-------~v~LvIvG~g~~~~~~~~e~~~~~~~L~~ 631 (816)
T 3s28_A 563 HLCVLKDKKKPILFTMARLDRVKNLSG-LVEWYGKNTRLR---E-------LANLVVVGGDRRKESKDNEEKAEMKKMYD 631 (816)
T ss_dssp EESCBSCTTSCEEEEECCCCTTTTHHH-HHHHHHHCHHHH---H-------HCEEEEECCCTTSCCCCHHHHHHHHHHHH
T ss_pred HhcccCCCCCeEEEEEccCcccCCHHH-HHHHHHHHHhhC---C-------CeEEEEEeCCCcccccchhhHHHHHHHHH
Confidence 456655788999999999999999999 988888775532 1 468999998874 23333334445555
Q ss_pred HHhhhcCCcCCCCcceEEEEcC---C--CHHHHhhhccCccccccCCCCCccCCCcchhHHhhcCceEeeecCchhHHHH
Q 003188 632 VGEVVNTDPEVNSYLKVVFVPN---Y--NVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIR 706 (840)
Q Consensus 632 la~~in~d~~~~~~lkVvFl~n---Y--nvslA~~ii~gaDv~l~iS~a~~EAsGTs~MKam~NGal~i~tlDGanvEi~ 706 (840)
+++..+ +.+ +|.|+.- + ..++.+.+..+||++.+||+ +|++|+.-+-||..|.+.|+|-.|..-|++
T Consensus 632 li~~lg----L~~--~V~flG~~~~~v~~~eL~~~~~~aaDvfV~PS~--~EgfglvllEAMA~G~PVIasd~GG~~EiV 703 (816)
T 3s28_A 632 LIEEYK----LNG--QFRWISSQMDRVRNGELYRYICDTKGAFVQPAL--YEAFGLTVVEAMTCGLPTFATCKGGPAEII 703 (816)
T ss_dssp HHHHTT----CBB--BEEEECCCCCHHHHHHHHHHHHHTTCEEEECCS--CBSSCHHHHHHHHTTCCEEEESSBTHHHHC
T ss_pred HHHHcC----CCC--cEEEccCccccCCHHHHHHHHHhcCeEEEECCC--ccCccHHHHHHHHcCCCEEEeCCCChHHHH
Confidence 555432 455 7888852 2 24566777679999999999 899999999999999999999777765544
Q ss_pred HHhcCcceEeecCccccchhhhhhccCCCCCCChhHHHHHHHHhcCCCCCCChHHHHHHHhhCCCCCCCccccccCChHH
Q 003188 707 QEIGEENFFLFGAVAEQVPKLRKEREDGLFKPDPRFEEAKQFIRSGAFGSYDYNPLLDSLEGNTGYGRGDYFLVGYDFPS 786 (840)
Q Consensus 707 ~~vG~~N~~~fG~~~d~V~~~~~~~~y~~~~~~~~l~~v~~~~~~G~f~~~~~~~l~~~L~~~~~~~~~D~~~~~~Df~~ 786 (840)
+. ++|+++| .+.+.+++.++|.
T Consensus 704 ~d--g~~Gllv-------------------------------------~p~D~e~LA~aI~------------------- 725 (816)
T 3s28_A 704 VH--GKSGFHI-------------------------------------DPYHGDQAADTLA------------------- 725 (816)
T ss_dssp CB--TTTBEEE-------------------------------------CTTSHHHHHHHHH-------------------
T ss_pred cc--CCcEEEe-------------------------------------CCCCHHHHHHHHH-------------------
Confidence 22 2333333 3334566666665
Q ss_pred HHHHHHHH-HHHhcCHHHHHHHHHHHhccC-CCCChHHHHHHHHH
Q 003188 787 YLEAQDRV-DQAYKDQKKWLKMSILSTAGS-GKFSSDRTIAQYAK 829 (840)
Q Consensus 787 y~~~~~~~-~~~Y~d~~~W~~~~~~n~a~~-g~FSsDrti~eYa~ 829 (840)
++ ...+.|++.|.++..++.... -.|||++++++|.+
T Consensus 726 ------~lL~~Ll~d~~~~~~m~~~ar~~a~~~fSwe~~a~~ll~ 764 (816)
T 3s28_A 726 ------DFFTKCKEDPSHWDEISKGGLQRIEEKYTWQIYSQRLLT 764 (816)
T ss_dssp ------HHHHHHHHCTHHHHHHHHHHHHHHHHSCCHHHHHHHHHH
T ss_pred ------HHHHHhccCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 33 345679999999988887655 58999999999986
No 11
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=99.07 E-value=1.4e-09 Score=122.30 Aligned_cols=195 Identities=14% Similarity=0.055 Sum_probs=126.0
Q ss_pred ccccccCCcccchhhhhHHHHHhhhhcCccc-c----CCCCCcccccccCcccccccCChhhhHHHHhhcCccccccChh
Q 003188 445 NLCVVSAHTVNGVAQLHSDILKADLFADYVS-L----WPNKLQNKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLD 519 (840)
Q Consensus 445 ~lai~~S~~VNgVS~lH~eilk~~~f~~~~~-l----~p~k~~~iTNGI~~rrWl~~~NP~l~~li~~~~g~~~w~~~~~ 519 (840)
...+..++.|-+||+-..+.+.+ . ..++ + .+.++.-|-|||+...+. |.
T Consensus 185 ~~~~~~ad~vi~~S~~~~~~~~~-~--~~~g~~~~~~~~~ki~vi~ngvd~~~~~----~~------------------- 238 (499)
T 2r60_A 185 RLTMSYADKIIVSTSQERFGQYS-H--DLYRGAVNVEDDDKFSVIPPGVNTRVFD----GE------------------- 238 (499)
T ss_dssp HHHHHHCSEEEESSHHHHHHTTT-S--GGGTTTCCTTCGGGEEECCCCBCTTTSS----SC-------------------
T ss_pred HHHHhcCCEEEECCHHHHHHHHh-h--hcccccccccCCCCeEEECCCcChhhcC----cc-------------------
Confidence 44566788999999876665542 1 0012 3 356788889999987762 21
Q ss_pred hHhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhC---CCCCCCCceEeecccchhhhhhhhhhhHHHHHHHHHhhc
Q 003188 520 LLVGLRQFADNTELQAEWESAKMASKKHLADYIWRVTG---VTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEM 596 (840)
Q Consensus 520 ~l~~l~~~~~d~~~~~~~~~~K~~nK~~L~~~i~~~~G---~~~dp~~l~d~~vkR~heYKRq~Lnll~ii~~y~~ik~~ 596 (840)
+.. +.+...+ +++| ..++++.++++++.|+..+|+.++ ++..+.++.+-
T Consensus 239 ---------~~~-------~~~~~~r--------~~~~~~~~~~~~~~~~i~~vGrl~~~Kg~~~-li~a~~~l~~~--- 290 (499)
T 2r60_A 239 ---------YGD-------KIKAKIT--------KYLERDLGSERMELPAIIASSRLDQKKNHYG-LVEAYVQNKEL--- 290 (499)
T ss_dssp ---------CCH-------HHHHHHH--------HHHHHHSCGGGTTSCEEEECSCCCGGGCHHH-HHHHHHTCHHH---
T ss_pred ---------chh-------hhHHHHH--------HHhcccccccCCCCcEEEEeecCccccCHHH-HHHHHHHHHHh---
Confidence 110 1111111 2333 113467788999999999999999 88887776542
Q ss_pred CccccCCCCCeEEEEEecC-Cc--CCHH----HHHHHHHHHHHHhhhcCCcCCCCcceEEEEcCCCHHHHhhhccCc---
Q 003188 597 SPQERKKTTPRTIMIGGKA-FA--TYTN----AKRIVKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGS--- 666 (840)
Q Consensus 597 ~p~~~~~~~p~~~If~GKA-~P--~y~~----aK~iIk~I~~la~~in~d~~~~~~lkVvFl~nYnvslA~~ii~ga--- 666 (840)
.|+ ...++++|.. .| .|.. .+...+.+.++++.. .+.+ +|.|+...+-+-...++++|
T Consensus 291 ~~~------~~~l~i~G~~~~~~~~y~~l~~~~~~y~~~l~~~~~~~----~l~~--~V~~~G~v~~~~~~~~~~~a~~~ 358 (499)
T 2r60_A 291 QDK------ANLVLTLRGIENPFEDYSRAGQEEKEILGKIIELIDNN----DCRG--KVSMFPLNSQQELAGCYAYLASK 358 (499)
T ss_dssp HHH------CEEEEEESSCSBTTTBCTTSCHHHHHHHHHHHHHHHHT----TCBT--TEEEEECCSHHHHHHHHHHHHHT
T ss_pred CCC------ceEEEEECCCCCcccccccccccchHHHHHHHHHHHhc----CCCc--eEEECCCCCHHHHHHHHHhcCcC
Confidence 111 4578888873 22 2211 100111233333322 1455 78898876656667888999
Q ss_pred -cccccCCCCCccCCCcchhHHhhcCceEeeecCchhHHHHH
Q 003188 667 -ELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQ 707 (840)
Q Consensus 667 -Dv~l~iS~a~~EAsGTs~MKam~NGal~i~tlDGanvEi~~ 707 (840)
|+...||+ .|..|+.-+=||..|.+.|+|-.|...|+++
T Consensus 359 ~dv~v~pS~--~Eg~~~~~lEAma~G~PvI~s~~~g~~e~v~ 398 (499)
T 2r60_A 359 GSVFALTSF--YEPFGLAPVEAMASGLPAVVTRNGGPAEILD 398 (499)
T ss_dssp TCEEEECCS--CBCCCSHHHHHHHTTCCEEEESSBHHHHHTG
T ss_pred CCEEEECcc--cCCCCcHHHHHHHcCCCEEEecCCCHHHHhc
Confidence 99999999 8999999999999999999997777655543
No 12
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=99.05 E-value=2.5e-09 Score=117.24 Aligned_cols=184 Identities=15% Similarity=0.162 Sum_probs=124.0
Q ss_pred ccccCCcccchhhhhHHHHHhhhhcCccccCCCCCcccccccCcccccccCChhhhHHHHhhcCccccccChhhHhhhhc
Q 003188 447 CVVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLLVGLRQ 526 (840)
Q Consensus 447 ai~~S~~VNgVS~lH~eilk~~~f~~~~~l~p~k~~~iTNGI~~rrWl~~~NP~l~~li~~~~g~~~w~~~~~~l~~l~~ 526 (840)
.+..++.|-.||+-..+.+++. + ++-+.++.-|-|||+...+ .|.-
T Consensus 181 ~~~~~d~ii~~s~~~~~~~~~~-~----g~~~~k~~vi~ngvd~~~~----~~~~------------------------- 226 (438)
T 3c48_A 181 LVDNADVLAVNTQEEMQDLMHH-Y----DADPDRISVVSPGADVELY----SPGN------------------------- 226 (438)
T ss_dssp HHHHCSEEEESSHHHHHHHHHH-H----CCCGGGEEECCCCCCTTTS----CCC--------------------------
T ss_pred HHhcCCEEEEcCHHHHHHHHHH-h----CCChhheEEecCCcccccc----CCcc-------------------------
Confidence 4456888999999877766542 2 3445678888899998776 2210
Q ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCceEeecccchhhhhhhhhhhHHHHHHHHHhhcCccccCCCCC
Q 003188 527 FADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTP 606 (840)
Q Consensus 527 ~~~d~~~~~~~~~~K~~nK~~L~~~i~~~~G~~~dp~~l~d~~vkR~heYKRq~Lnll~ii~~y~~ik~~~p~~~~~~~p 606 (840)
. ..+ .. +++++|+ +++.+.++++.|+..+|+.++ ++..+.++.+ . .|. .+
T Consensus 227 ---~--------~~~----~~----~r~~~~~--~~~~~~i~~~G~~~~~Kg~~~-li~a~~~l~~--~-~p~-----~~ 276 (438)
T 3c48_A 227 ---D--------RAT----ER----SRRELGI--PLHTKVVAFVGRLQPFKGPQV-LIKAVAALFD--R-DPD-----RN 276 (438)
T ss_dssp --------------C----HH----HHHHTTC--CSSSEEEEEESCBSGGGCHHH-HHHHHHHHHH--H-CTT-----CS
T ss_pred ---c--------chh----hh----hHHhcCC--CCCCcEEEEEeeecccCCHHH-HHHHHHHHHh--h-CCC-----cc
Confidence 0 000 00 1235564 467789999999999999999 8888877654 2 221 15
Q ss_pred eEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcCCCCcceEEEEcCCCHHHHhhhccCccccccCCCCCccCCCcchhH
Q 003188 607 RTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMK 686 (840)
Q Consensus 607 ~~~If~GKA~P~y~~aK~iIk~I~~la~~in~d~~~~~~lkVvFl~nYnvslA~~ii~gaDv~l~iS~a~~EAsGTs~MK 686 (840)
+.+++.|...+.-..... +.++++.. .+.+ +|.|+....-+-...++.+||+...+|+ .|..|+.-+-
T Consensus 277 ~~l~i~G~~~~~g~~~~~----l~~~~~~~----~l~~--~v~~~g~~~~~~~~~~~~~adv~v~ps~--~e~~~~~~~E 344 (438)
T 3c48_A 277 LRVIICGGPSGPNATPDT----YRHMAEEL----GVEK--RIRFLDPRPPSELVAVYRAADIVAVPSF--NESFGLVAME 344 (438)
T ss_dssp EEEEEECCBC------CH----HHHHHHHT----TCTT--TEEEECCCCHHHHHHHHHHCSEEEECCS--CCSSCHHHHH
T ss_pred eEEEEEeCCCCCCcHHHH----HHHHHHHc----CCCC--cEEEcCCCChHHHHHHHHhCCEEEECcc--ccCCchHHHH
Confidence 789999973321111122 33333322 1445 6888877665666788899999999998 8999999999
Q ss_pred HhhcCceEeeecCchhHHHH
Q 003188 687 FSLNGCLIIGTLDGANVEIR 706 (840)
Q Consensus 687 am~NGal~i~tlDGanvEi~ 706 (840)
+|..|.+.|+|-.|...|++
T Consensus 345 ama~G~PvI~~~~~~~~e~i 364 (438)
T 3c48_A 345 AQASGTPVIAARVGGLPIAV 364 (438)
T ss_dssp HHHTTCCEEEESCTTHHHHS
T ss_pred HHHcCCCEEecCCCChhHHh
Confidence 99999999999777665544
No 13
>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A*
Probab=98.97 E-value=2.7e-09 Score=121.96 Aligned_cols=121 Identities=8% Similarity=-0.023 Sum_probs=83.1
Q ss_pred CCceEeecccchhhhhhhhhhhHHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCC-HHHHHHHHHHHHHHhhhcCCcC
Q 003188 563 NSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATY-TNAKRIVKLVNDVGEVVNTDPE 641 (840)
Q Consensus 563 ~~l~d~~vkR~heYKRq~Lnll~ii~~y~~ik~~~p~~~~~~~p~~~If~GKA~P~y-~~aK~iIk~I~~la~~in~d~~ 641 (840)
+..++++|.||...|+... ++..+.++.+ . .|+.+ ..+++|+.|....++ ..-.++-+.+.+++..||..-.
T Consensus 254 ~~~vil~VgRl~~~Kgi~~-ll~A~~~ll~--~-~p~~~---~~v~Lv~vG~p~~~~~~~~~~l~~~l~~l~~~in~~~g 326 (482)
T 1uqt_A 254 NVQNIFSVERLDYSKGLPE-RFLAYEALLE--K-YPQHH---GKIRYTQIAPTSRGDVQAYQDIRHQLENEAGRINGKYG 326 (482)
T ss_dssp TCEEEEEECCBCGGGCHHH-HHHHHHHHHH--H-CGGGT---TTEEEEEECCBCSTTSHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCEEEEEEeCCcccCCHHH-HHHHHHHHHH--h-Ccccc---CcEEEEEEECCCccchHHHHHHHHHHHHHHHHHhhhcc
Confidence 4578899999999999999 9999888765 3 45421 247788877643322 1222344566666665552211
Q ss_pred CCCcceEEEEcC-CCHHHHhhhccCccccccCCCCCccCCCcchhHHhhcCc
Q 003188 642 VNSYLKVVFVPN-YNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGC 692 (840)
Q Consensus 642 ~~~~lkVvFl~n-YnvslA~~ii~gaDv~l~iS~a~~EAsGTs~MKam~NGa 692 (840)
..+.-.|+|+.+ ..-+--..++.+||+++.+|+ .|.-|+.-+-||.-|.
T Consensus 327 ~~~~~~v~~~~g~v~~~el~~ly~~ADv~v~pS~--~EGfgLv~lEAmA~g~ 376 (482)
T 1uqt_A 327 QLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPL--RDGMNLVAKEYVAAQD 376 (482)
T ss_dssp BTTBCSEEEECSCCCHHHHHHHHHHCSEEEECCS--SBSCCHHHHHHHHHSC
T ss_pred cCCCceEEEeCCCCCHHHHHHHHHHccEEEECCC--cccCCchHHHHHHhCC
Confidence 122224887654 344444578999999999999 9999999999999884
No 14
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=98.96 E-value=1.2e-08 Score=109.34 Aligned_cols=235 Identities=13% Similarity=0.150 Sum_probs=156.5
Q ss_pred ccCCcccchhhhhHHHHHhhhhcCccccCCCCCcccccccCcccccccCChhhhHHHHhhcCccccccChhhHhhhhccC
Q 003188 449 VSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLLVGLRQFA 528 (840)
Q Consensus 449 ~~S~~VNgVS~lH~eilk~~~f~~~~~l~p~k~~~iTNGI~~rrWl~~~NP~l~~li~~~~g~~~w~~~~~~l~~l~~~~ 528 (840)
..++.+-.+|+-..+.+++. ++ .+.++.-|-|||+...+ .|.
T Consensus 139 ~~~d~ii~~s~~~~~~~~~~-~~-----~~~~~~vi~ngv~~~~~----~~~---------------------------- 180 (394)
T 3okp_A 139 TEVDVLTYISQYTLRRFKSA-FG-----SHPTFEHLPSGVDVKRF----TPA---------------------------- 180 (394)
T ss_dssp HHCSEEEESCHHHHHHHHHH-HC-----SSSEEEECCCCBCTTTS----CCC----------------------------
T ss_pred HhCCEEEEcCHHHHHHHHHh-cC-----CCCCeEEecCCcCHHHc----CCC----------------------------
Confidence 46778888999877777642 21 24577888899998777 221
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCceEeecccchhhhhhhhhhhHHHHHHHHHhhcCccccCCCCCeE
Q 003188 529 DNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRT 608 (840)
Q Consensus 529 ~d~~~~~~~~~~K~~nK~~L~~~i~~~~G~~~dp~~l~d~~vkR~heYKRq~Lnll~ii~~y~~ik~~~p~~~~~~~p~~ 608 (840)
++ ..+ ..+ ++++|+ +++.+..+++.|+..+|+.++ ++..+.++.+ . . .+..
T Consensus 181 -~~-------~~~----~~~----~~~~~~--~~~~~~i~~~G~~~~~Kg~~~-li~a~~~l~~--~-~-------~~~~ 231 (394)
T 3okp_A 181 -TP-------EDK----SAT----RKKLGF--TDTTPVIACNSRLVPRKGQDS-LIKAMPQVIA--A-R-------PDAQ 231 (394)
T ss_dssp -CH-------HHH----HHH----HHHTTC--CTTCCEEEEESCSCGGGCHHH-HHHHHHHHHH--H-S-------TTCE
T ss_pred -Cc-------hhh----HHH----HHhcCC--CcCceEEEEEeccccccCHHH-HHHHHHHHHh--h-C-------CCeE
Confidence 10 111 111 235565 467789999999999999999 9888877655 2 2 2578
Q ss_pred EEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcCCCCcceEEEEcCCCHHHHhhhccCccccccCCCCC-----ccCCCcc
Q 003188 609 IMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAG-----MEASGTS 683 (840)
Q Consensus 609 ~If~GKA~P~y~~aK~iIk~I~~la~~in~d~~~~~~lkVvFl~nYnvslA~~ii~gaDv~l~iS~a~-----~EAsGTs 683 (840)
+++.|.+. +.. .+.+++. .+.+ +|.|+...+-+-...++..||+.+.||+.+ .|..|+.
T Consensus 232 l~i~G~g~--~~~------~l~~~~~------~~~~--~v~~~g~~~~~~~~~~~~~ad~~v~ps~~~~~~~~~e~~~~~ 295 (394)
T 3okp_A 232 LLIVGSGR--YES------TLRRLAT------DVSQ--NVKFLGRLEYQDMINTLAAADIFAMPARTRGGGLDVEGLGIV 295 (394)
T ss_dssp EEEECCCT--THH------HHHHHTG------GGGG--GEEEEESCCHHHHHHHHHHCSEEEECCCCBGGGTBCCSSCHH
T ss_pred EEEEcCch--HHH------HHHHHHh------cccC--eEEEcCCCCHHHHHHHHHhCCEEEecCccccccccccccCcH
Confidence 99999752 221 1233322 1334 789988876666777889999999999931 2999999
Q ss_pred hhHHhhcCceEeeecCchhHHHHHHhcCcceEeecCccccchhhhhhccCCCCCCChhHHHHHHHHhcCCCCCCChHHHH
Q 003188 684 NMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAVAEQVPKLRKEREDGLFKPDPRFEEAKQFIRSGAFGSYDYNPLL 763 (840)
Q Consensus 684 ~MKam~NGal~i~tlDGanvEi~~~vG~~N~~~fG~~~d~V~~~~~~~~y~~~~~~~~l~~v~~~~~~G~f~~~~~~~l~ 763 (840)
-+-+|..|.+.|+|-.|..-|+++. .++++ +.+.+.++|.
T Consensus 296 ~~Ea~a~G~PvI~~~~~~~~e~i~~---~~g~~-------------------------------------~~~~d~~~l~ 335 (394)
T 3okp_A 296 YLEAQACGVPVIAGTSGGAPETVTP---ATGLV-------------------------------------VEGSDVDKLS 335 (394)
T ss_dssp HHHHHHTTCCEEECSSTTGGGGCCT---TTEEE-------------------------------------CCTTCHHHHH
T ss_pred HHHHHHcCCCEEEeCCCChHHHHhc---CCceE-------------------------------------eCCCCHHHHH
Confidence 9999999999998865554332211 02222 2333456665
Q ss_pred HHHhhCCCCCCCccccccCChHHHHHHHHHHHHHhcCHHHHHHHHHHHhccC-CCCChHHHHHHHHHHHhcc
Q 003188 764 DSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYKDQKKWLKMSILSTAGS-GKFSSDRTIAQYAKEIWNI 834 (840)
Q Consensus 764 ~~L~~~~~~~~~D~~~~~~Df~~y~~~~~~~~~~Y~d~~~W~~~~~~n~a~~-g~FSsDrti~eYa~~iw~~ 834 (840)
++|. .+..|++.+.++..++.... ..|||++.+++|.+-+=.+
T Consensus 336 ~~i~----------------------------~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~ 379 (394)
T 3okp_A 336 ELLI----------------------------ELLDDPIRRAAMGAAGRAHVEAEWSWEIMGERLTNILQSE 379 (394)
T ss_dssp HHHH----------------------------HHHTCHHHHHHHHHHHHHHHHHHTBHHHHHHHHHHHHHSC
T ss_pred HHHH----------------------------HHHhCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHh
Confidence 5553 33458888887777665443 2599999999998765443
No 15
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=98.95 E-value=4.4e-09 Score=114.08 Aligned_cols=232 Identities=17% Similarity=0.174 Sum_probs=148.0
Q ss_pred ccccccCCcccchhhhhHHHHHhhhhcCccccCCCCCcccccccCcccccccCChhhhHHHHhhcCccccccChhhHhhh
Q 003188 445 NLCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLLVGL 524 (840)
Q Consensus 445 ~lai~~S~~VNgVS~lH~eilk~~~f~~~~~l~p~k~~~iTNGI~~rrWl~~~NP~l~~li~~~~g~~~w~~~~~~l~~l 524 (840)
...+..++.|-+||+-..+.+++. + .. +.++.-|-|||+...+ .|.
T Consensus 151 ~~~~~~ad~ii~~s~~~~~~~~~~-~----~~-~~~~~vi~ngv~~~~~----~~~------------------------ 196 (394)
T 2jjm_A 151 RFGIEQSDVVTAVSHSLINETHEL-V----KP-NKDIQTVYNFIDERVY----FKR------------------------ 196 (394)
T ss_dssp HHHHHHSSEEEESCHHHHHHHHHH-T----CC-SSCEEECCCCCCTTTC----CCC------------------------
T ss_pred HHHHhhCCEEEECCHHHHHHHHHh-h----CC-cccEEEecCCccHHhc----CCc------------------------
Confidence 344567888999999877776642 2 11 5678888999998776 221
Q ss_pred hccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCceEeecccchhhhhhhhhhhHHHHHHHHHhhcCccccCCC
Q 003188 525 RQFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKT 604 (840)
Q Consensus 525 ~~~~~d~~~~~~~~~~K~~nK~~L~~~i~~~~G~~~dp~~l~d~~vkR~heYKRq~Lnll~ii~~y~~ik~~~p~~~~~~ 604 (840)
+.. +. ++++|+ +++.+..+++.|+..+|+.++ ++..+.++.+ .
T Consensus 197 ----~~~-------~~------------~~~~~~--~~~~~~i~~~G~~~~~Kg~~~-li~a~~~l~~----~------- 239 (394)
T 2jjm_A 197 ----DMT-------QL------------KKEYGI--SESEKILIHISNFRKVKRVQD-VVQAFAKIVT----E------- 239 (394)
T ss_dssp ----CCH-------HH------------HHHTTC--C---CEEEEECCCCGGGTHHH-HHHHHHHHHH----S-------
T ss_pred ----chH-------HH------------HHHcCC--CCCCeEEEEeeccccccCHHH-HHHHHHHHHh----h-------
Confidence 111 11 124454 356788999999999999999 8887776643 1
Q ss_pred CCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcCCCCcceEEEEcCCCHHHHhhhccCccccccCCCCCccCCCcch
Q 003188 605 TPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSN 684 (840)
Q Consensus 605 ~p~~~If~GKA~P~y~~aK~iIk~I~~la~~in~d~~~~~~lkVvFl~nYnvslA~~ii~gaDv~l~iS~a~~EAsGTs~ 684 (840)
.|..+++.|.+.. . .+ +.++++.. .+.+ +|.|+. +... ...++.+||+...||+ .|+.|++-
T Consensus 240 ~~~~l~i~G~g~~--~--~~----l~~~~~~~----~l~~--~v~~~g-~~~~-~~~~~~~adv~v~ps~--~e~~~~~~ 301 (394)
T 2jjm_A 240 VDAKLLLVGDGPE--F--CT----ILQLVKNL----HIED--RVLFLG-KQDN-VAELLAMSDLMLLLSE--KESFGLVL 301 (394)
T ss_dssp SCCEEEEECCCTT--H--HH----HHHHHHTT----TCGG--GBCCCB-SCSC-THHHHHTCSEEEECCS--CCSCCHHH
T ss_pred CCCEEEEECCchH--H--HH----HHHHHHHc----CCCC--eEEEeC-chhh-HHHHHHhCCEEEeccc--cCCCchHH
Confidence 2678999997542 1 22 33333321 1334 566666 4433 3467799999999999 89999999
Q ss_pred hHHhhcCceEeeecCchhHHHHHHhcCcceEeecCccccchhhhhhccCCCCCCChhHHHHHHHHhcCCCCCCChHHHHH
Q 003188 685 MKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAVAEQVPKLRKEREDGLFKPDPRFEEAKQFIRSGAFGSYDYNPLLD 764 (840)
Q Consensus 685 MKam~NGal~i~tlDGanvEi~~~vG~~N~~~fG~~~d~V~~~~~~~~y~~~~~~~~l~~v~~~~~~G~f~~~~~~~l~~ 764 (840)
+-+|..|.+.|+|-.|..-|+++. ++++++ +.+.+.+++.+
T Consensus 302 ~EAma~G~PvI~~~~~~~~e~v~~--~~~g~~-------------------------------------~~~~d~~~la~ 342 (394)
T 2jjm_A 302 LEAMACGVPCIGTRVGGIPEVIQH--GDTGYL-------------------------------------CEVGDTTGVAD 342 (394)
T ss_dssp HHHHHTTCCEEEECCTTSTTTCCB--TTTEEE-------------------------------------ECTTCHHHHHH
T ss_pred HHHHhcCCCEEEecCCChHHHhhc--CCceEE-------------------------------------eCCCCHHHHHH
Confidence 999999999998855554332211 122222 23334566655
Q ss_pred HHhhCCCCCCCccccccCChHHHHHHHHHHHHHhcCHHHHHHHHHHHhccC-CCCChHHHHHHHHHHHh
Q 003188 765 SLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYKDQKKWLKMSILSTAGS-GKFSSDRTIAQYAKEIW 832 (840)
Q Consensus 765 ~L~~~~~~~~~D~~~~~~Df~~y~~~~~~~~~~Y~d~~~W~~~~~~n~a~~-g~FSsDrti~eYa~~iw 832 (840)
+|. + +..|++.+.++..++-... -.|||++.+++|.+-+=
T Consensus 343 ~i~-------------------------~---l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~ 383 (394)
T 2jjm_A 343 QAI-------------------------Q---LLKDEELHRNMGERARESVYEQFRSEKIVSQYETIYY 383 (394)
T ss_dssp HHH-------------------------H---HHHCHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHH
T ss_pred HHH-------------------------H---HHcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 554 2 2346777776666554433 37999999999876543
No 16
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=98.64 E-value=2.4e-07 Score=101.16 Aligned_cols=139 Identities=16% Similarity=0.137 Sum_probs=99.8
Q ss_pred HHhCCCCCCCCceEeecccchhhhhhhhhhhHHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHH
Q 003188 554 RVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVG 633 (840)
Q Consensus 554 ~~~G~~~dp~~l~d~~vkR~heYKRq~Lnll~ii~~y~~ik~~~p~~~~~~~p~~~If~GKA~P~y~~aK~iIk~I~~la 633 (840)
+++|+ +++.+.++++.|+..+|+.++ ++..+..+.+ . .| +..+++.|.+.......+. .+.+++
T Consensus 223 ~~~~~--~~~~~~i~~vGrl~~~Kg~~~-li~a~~~l~~--~-~~-------~~~l~i~G~g~~~~~~~~~---~l~~~~ 286 (416)
T 2x6q_A 223 ERFDV--DPEKPIITQVSRFDPWKGIFD-VIEIYRKVKE--K-IP-------GVQLLLVGVMAHDDPEGWI---YFEKTL 286 (416)
T ss_dssp HHTTC--CTTSCEEEEECCCCTTSCHHH-HHHHHHHHHH--H-CT-------TCEEEEEECCCTTCHHHHH---HHHHHH
T ss_pred HHhCC--CCCCcEEEEEeccccccCHHH-HHHHHHHHHH--h-CC-------CeEEEEEecCcccchhHHH---HHHHHH
Confidence 45565 467889999999999999999 9888877654 2 22 5789999998754322221 223333
Q ss_pred hhhcCCcCCCCcceEEEEc---CCCHHHHhhhccCccccccCCCCCccCCCcchhHHhhcCceEeeecCchhHHHHHHhc
Q 003188 634 EVVNTDPEVNSYLKVVFVP---NYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIG 710 (840)
Q Consensus 634 ~~in~d~~~~~~lkVvFl~---nYnvslA~~ii~gaDv~l~iS~a~~EAsGTs~MKam~NGal~i~tlDGanvEi~~~vG 710 (840)
+..+ ..+ +|.|+. +++-+-...++++||+...+|+ .|..|+.-+-||..|.+.|+|-.|...|+++.
T Consensus 287 ~~~~----~~~--~V~~~G~~~~~~~~~~~~~~~~ad~~v~ps~--~E~~~~~~lEAma~G~PvI~~~~~g~~e~i~~-- 356 (416)
T 2x6q_A 287 RKIG----EDY--DVKVLTNLIGVHAREVNAFQRASDVILQMSI--REGFGLTVTEAMWKGKPVIGRAVGGIKFQIVD-- 356 (416)
T ss_dssp HHHT----TCT--TEEEEEGGGTCCHHHHHHHHHHCSEEEECCS--SCSSCHHHHHHHHTTCCEEEESCHHHHHHCCB--
T ss_pred HHhC----CCC--cEEEecccCCCCHHHHHHHHHhCCEEEECCC--cCCCccHHHHHHHcCCCEEEccCCCChhheec--
Confidence 3222 344 678864 5555566778899999999999 89999999999999999999977776555432
Q ss_pred CcceEeec
Q 003188 711 EENFFLFG 718 (840)
Q Consensus 711 ~~N~~~fG 718 (840)
+++++++.
T Consensus 357 ~~~g~l~~ 364 (416)
T 2x6q_A 357 GETGFLVR 364 (416)
T ss_dssp TTTEEEES
T ss_pred CCCeEEEC
Confidence 34566653
No 17
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=98.58 E-value=2.8e-07 Score=100.32 Aligned_cols=247 Identities=11% Similarity=0.076 Sum_probs=159.4
Q ss_pred cccCC--cccchhhhhHHHHHhhhhcCccccCCCCCcccccccCcccccccCChhhhHHHHhhcCccccccChhhHhhhh
Q 003188 448 VVSAH--TVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLLVGLR 525 (840)
Q Consensus 448 i~~S~--~VNgVS~lH~eilk~~~f~~~~~l~p~k~~~iTNGI~~rrWl~~~NP~l~~li~~~~g~~~w~~~~~~l~~l~ 525 (840)
+..++ .|-.+|+-..+.++. + .. +.++.-|.|||+...+ .
T Consensus 129 ~~~~~~~~ii~~S~~~~~~~~~--~----~~-~~~~~vi~ngvd~~~~----------------~--------------- 170 (413)
T 3oy2_A 129 FSHPKVVGVMAMSKCWISDICN--Y----GC-KVPINIVSHFVDTKTI----------------Y--------------- 170 (413)
T ss_dssp GGCTTEEEEEESSTHHHHHHHH--T----TC-CSCEEECCCCCCCCCC----------------T---------------
T ss_pred HhccCCceEEEcCHHHHHHHHH--c----CC-CCceEEeCCCCCHHHH----------------H---------------
Confidence 33455 688889887777664 2 22 5678888899886543 1
Q ss_pred ccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCceEeecccchhhhhhhhhhhHHHHHHHHHhhcCccccCCCC
Q 003188 526 QFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTT 605 (840)
Q Consensus 526 ~~~~d~~~~~~~~~~K~~nK~~L~~~i~~~~G~~~dp~~l~d~~vkR~heYKRq~Lnll~ii~~y~~ik~~~p~~~~~~~ 605 (840)
. . ++++|++-+.+.+.++++.|+..+|+.++ ++..+.++.+ . .|
T Consensus 171 ----~------~---------------~~~~~~~~~~~~~~il~vGr~~~~Kg~~~-li~a~~~l~~--~-~~------- 214 (413)
T 3oy2_A 171 ----D------A---------------RKLVGLSEYNDDVLFLNMNRNTARKRLDI-YVLAAARFIS--K-YP------- 214 (413)
T ss_dssp ----T------H---------------HHHTTCGGGTTSEEEECCSCSSGGGTHHH-HHHHHHHHHH--H-CT-------
T ss_pred ----H------H---------------HHhcCCCcccCceEEEEcCCCchhcCcHH-HHHHHHHHHH--h-CC-------
Confidence 1 2 13456553337899999999999999999 9998888755 2 22
Q ss_pred CeEEEEEecCCcCCH--HHHHHHHHHHHHHhhhcCCcCCCCcc----eEEEEcCC-CHHHHhhhccCccccccCCCCCcc
Q 003188 606 PRTIMIGGKAFATYT--NAKRIVKLVNDVGEVVNTDPEVNSYL----KVVFVPNY-NVSVAELLIPGSELSQHISTAGME 678 (840)
Q Consensus 606 p~~~If~GKA~P~y~--~aK~iIk~I~~la~~in~d~~~~~~l----kVvFl~nY-nvslA~~ii~gaDv~l~iS~a~~E 678 (840)
+.++++.|.+.+... .-..+-+++.+.. +.+++ +|+++.+| +-+--..++.+||+...||+ .|
T Consensus 215 ~~~l~ivG~g~~~~~~~l~~~~~~~~~~~~--------l~~~v~~l~~vv~~~g~~~~~~~~~~~~~adv~v~pS~--~E 284 (413)
T 3oy2_A 215 DAKVRFLCNSHHESKFDLHSIALRELVASG--------VDNVFTHLNKIMINRTVLTDERVDMMYNACDVIVNCSS--GE 284 (413)
T ss_dssp TCCEEEEEECCTTCSCCHHHHHHHHHHHHT--------CSCHHHHHTTEEEECSCCCHHHHHHHHHHCSEEEECCS--CC
T ss_pred CcEEEEEeCCcccchhhHHHHHHHHHHHcC--------cccccccccceeeccCcCCHHHHHHHHHhCCEEEeCCC--cC
Confidence 467888998865432 2233333333322 44410 25666665 44455568899999999999 99
Q ss_pred CCCcchhHHhhcCceEeeecCchhHHHHHHhcCcceEeecCccccchhhhhhccCCCCCCChhHHHHHHHHhcC---CCC
Q 003188 679 ASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAVAEQVPKLRKEREDGLFKPDPRFEEAKQFIRSG---AFG 755 (840)
Q Consensus 679 AsGTs~MKam~NGal~i~tlDGanvEi~~~vG~~N~~~fG~~~d~V~~~~~~~~y~~~~~~~~l~~v~~~~~~G---~f~ 755 (840)
..|+.-+-||..|.+.|+|--|..-|+++. ...+..........+ ..+| .+.
T Consensus 285 ~~~~~~lEAma~G~PvI~s~~~g~~e~v~~---~~~~~i~~~~~~~~~----------------------~~~G~~gl~~ 339 (413)
T 3oy2_A 285 GFGLCSAEGAVLGKPLIISAVGGADDYFSG---DCVYKIKPSAWISVD----------------------DRDGIGGIEG 339 (413)
T ss_dssp SSCHHHHHHHTTTCCEEEECCHHHHHHSCT---TTSEEECCCEEEECT----------------------TTCSSCCEEE
T ss_pred CCCcHHHHHHHcCCCEEEcCCCChHHHHcc---Ccccccccccccccc----------------------cccCcceeeC
Confidence 999999999999999999988877655532 111222111100000 0112 233
Q ss_pred CCChHHHHHHHhhCCCCCCCccccccCChHHHHHHHHHHHHHhcCHHHHHHHHHHHhccC-CCCChHHHHHHHHHHHh
Q 003188 756 SYDYNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYKDQKKWLKMSILSTAGS-GKFSSDRTIAQYAKEIW 832 (840)
Q Consensus 756 ~~~~~~l~~~L~~~~~~~~~D~~~~~~Df~~y~~~~~~~~~~Y~d~~~W~~~~~~n~a~~-g~FSsDrti~eYa~~iw 832 (840)
+.+.++|.+ .+ .+..|++.+.++...+.... -.|||++.+++|.+-+=
T Consensus 340 ~~d~~~la~----------------------------~i-~l~~~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~ 388 (413)
T 3oy2_A 340 IIDVDDLVE----------------------------AF-TFFKDEKNRKEYGKRVQDFVKTKPTWDDISSDIIDFFN 388 (413)
T ss_dssp ECCHHHHHH----------------------------HH-HHTTSHHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHH
T ss_pred CCCHHHHHH----------------------------HH-HHhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 344555543 34 45678888888877776643 47999999999976543
No 18
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=98.58 E-value=5.8e-07 Score=95.73 Aligned_cols=183 Identities=15% Similarity=0.142 Sum_probs=123.5
Q ss_pred cCCcccchhhhhHHHHHhhhhcCccccCCCCCcccccccCcccccccCChhhhHHHHhhcCccccccChhhHhhhhccCC
Q 003188 450 SAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLLVGLRQFAD 529 (840)
Q Consensus 450 ~S~~VNgVS~lH~eilk~~~f~~~~~l~p~k~~~iTNGI~~rrWl~~~NP~l~~li~~~~g~~~w~~~~~~l~~l~~~~~ 529 (840)
.++.|-.||+...+.+.+. +++-+.++.-|.|||+...+. |.- ..
T Consensus 136 ~~d~ii~~s~~~~~~~~~~-----~~~~~~~~~vi~ngv~~~~~~----~~~--------------------------~~ 180 (374)
T 2iw1_A 136 KSTKLMMLTDKQIADFQKH-----YQTEPERFQILPPGIYPDRKY----SEQ--------------------------IP 180 (374)
T ss_dssp CCCEEEESCHHHHHHHHHH-----HCCCGGGEEECCCCCCGGGSG----GGS--------------------------CT
T ss_pred CCcEEEEcCHHHHHHHHHH-----hCCChhheEEecCCcCHHhcC----ccc--------------------------ch
Confidence 5778888999877766542 233456788888999987772 211 00
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCceEeecccchhhhhhhhhhhHHHHHHHHHhhcCccccCCCCCeEE
Q 003188 530 NTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTI 609 (840)
Q Consensus 530 d~~~~~~~~~~K~~nK~~L~~~i~~~~G~~~dp~~l~d~~vkR~heYKRq~Lnll~ii~~y~~ik~~~p~~~~~~~p~~~ 609 (840)
. .+.. + ++++|+ +++.+..+++.|+..+|+.++ ++..+.++.+-.. .++.+
T Consensus 181 ~---------~~~~----~----~~~~~~--~~~~~~i~~~G~~~~~K~~~~-li~a~~~l~~~~~---------~~~~l 231 (374)
T 2iw1_A 181 N---------SREI----Y----RQKNGI--KEQQNLLLQVGSDFGRKGVDR-SIEALASLPESLR---------HNTLL 231 (374)
T ss_dssp T---------HHHH----H----HHHTTC--CTTCEEEEEECSCTTTTTHHH-HHHHHHTSCHHHH---------HTEEE
T ss_pred h---------HHHH----H----HHHhCC--CCCCeEEEEeccchhhcCHHH-HHHHHHHhHhccC---------CceEE
Confidence 0 1111 1 235564 466789999999999999999 8877665533100 15789
Q ss_pred EEEecCCcCCHHHHHHHHHHHHHHhhhcCCcCCCCcceEEEEcCCCHHHHhhhccCccccccCCCCCccCCCcchhHHhh
Q 003188 610 MIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSL 689 (840)
Q Consensus 610 If~GKA~P~y~~aK~iIk~I~~la~~in~d~~~~~~lkVvFl~nYnvslA~~ii~gaDv~l~iS~a~~EAsGTs~MKam~ 689 (840)
++.|.+.+ +.+.+++.++. +.+ +|.|+.. . +-...++++||+...||+ .|+.|++-+-+|.
T Consensus 232 ~i~G~g~~-----~~~~~~~~~~~--------~~~--~v~~~g~-~-~~~~~~~~~ad~~v~ps~--~e~~~~~~~Ea~a 292 (374)
T 2iw1_A 232 FVVGQDKP-----RKFEALAEKLG--------VRS--NVHFFSG-R-NDVSELMAAADLLLHPAY--QEAAGIVLLEAIT 292 (374)
T ss_dssp EEESSSCC-----HHHHHHHHHHT--------CGG--GEEEESC-C-SCHHHHHHHCSEEEECCS--CCSSCHHHHHHHH
T ss_pred EEEcCCCH-----HHHHHHHHHcC--------CCC--cEEECCC-c-ccHHHHHHhcCEEEeccc--cCCcccHHHHHHH
Confidence 99998642 23333443332 334 6778764 3 334567899999999999 8999999999999
Q ss_pred cCceEeeecCchhHHHHHHhcCcceEee
Q 003188 690 NGCLIIGTLDGANVEIRQEIGEENFFLF 717 (840)
Q Consensus 690 NGal~i~tlDGanvEi~~~vG~~N~~~f 717 (840)
.|.+.|+|-.|...|+++.. ++++++
T Consensus 293 ~G~Pvi~~~~~~~~e~i~~~--~~g~~~ 318 (374)
T 2iw1_A 293 AGLPVLTTAVCGYAHYIADA--NCGTVI 318 (374)
T ss_dssp HTCCEEEETTSTTTHHHHHH--TCEEEE
T ss_pred CCCCEEEecCCCchhhhccC--CceEEe
Confidence 99999999777776666542 344444
No 19
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=98.57 E-value=1.2e-06 Score=94.38 Aligned_cols=174 Identities=11% Similarity=0.055 Sum_probs=118.1
Q ss_pred CCceEeecccc-hhhhhhhhhhhHHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcC
Q 003188 563 NSLFDIQVKRI-HEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPE 641 (840)
Q Consensus 563 ~~l~d~~vkR~-heYKRq~Lnll~ii~~y~~ik~~~p~~~~~~~p~~~If~GKA~P~y~~aK~iIk~I~~la~~in~d~~ 641 (840)
+.+..+++.|+ ..+|+.++ ++..+.++.+ . . .+.++++.|.+.. . . +.++++.
T Consensus 207 ~~~~i~~~G~~~~~~Kg~~~-li~a~~~l~~--~-~-------~~~~l~i~G~~~~--~---~----l~~~~~~------ 260 (406)
T 2gek_A 207 EGRTVLFLGRYDEPRKGMAV-LLAALPKLVA--R-F-------PDVEILIVGRGDE--D---E----LREQAGD------ 260 (406)
T ss_dssp SSCEEEEESCTTSGGGCHHH-HHHHHHHHHT--T-S-------TTCEEEEESCSCH--H---H----HHHHTGG------
T ss_pred CCeEEEEEeeeCccccCHHH-HHHHHHHHHH--H-C-------CCeEEEEEcCCcH--H---H----HHHHHHh------
Confidence 45789999999 99999999 8887776543 1 1 2578999998754 2 2 2333321
Q ss_pred CCCcceEEEEcCCCHHHHhhhccCccccccCCCCCccCCCcchhHHhhcCceEeeecCchhHHHHHHhcCcceEeecCcc
Q 003188 642 VNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAVA 721 (840)
Q Consensus 642 ~~~~lkVvFl~nYnvslA~~ii~gaDv~l~iS~a~~EAsGTs~MKam~NGal~i~tlDGanvEi~~~vG~~N~~~fG~~~ 721 (840)
..+ +|.|+...+-.-...++..||+.+.+|. ..|.+|+.-+-+|..|.+.|+|--|..-|+++. ++++++|
T Consensus 261 ~~~--~v~~~g~~~~~~~~~~~~~adv~v~ps~-~~e~~~~~~~Ea~a~G~PvI~~~~~~~~e~i~~--~~~g~~~---- 331 (406)
T 2gek_A 261 LAG--HLRFLGQVDDATKASAMRSADVYCAPHL-GGESFGIVLVEAMAAGTAVVASDLDAFRRVLAD--GDAGRLV---- 331 (406)
T ss_dssp GGG--GEEECCSCCHHHHHHHHHHSSEEEECCC-SCCSSCHHHHHHHHHTCEEEECCCHHHHHHHTT--TTSSEEC----
T ss_pred ccC--cEEEEecCCHHHHHHHHHHCCEEEecCC-CCCCCchHHHHHHHcCCCEEEecCCcHHHHhcC--CCceEEe----
Confidence 123 6888776665555778899999999983 279999999999999999999977666554432 1233333
Q ss_pred ccchhhhhhccCCCCCCChhHHHHHHHHhcCCCCCCChHHHHHHHhhCCCCCCCccccccCChHHHHHHHHHHHHHhcCH
Q 003188 722 EQVPKLRKEREDGLFKPDPRFEEAKQFIRSGAFGSYDYNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYKDQ 801 (840)
Q Consensus 722 d~V~~~~~~~~y~~~~~~~~l~~v~~~~~~G~f~~~~~~~l~~~L~~~~~~~~~D~~~~~~Df~~y~~~~~~~~~~Y~d~ 801 (840)
.+.+.+++.++|. .+..|+
T Consensus 332 ---------------------------------~~~d~~~l~~~i~----------------------------~l~~~~ 350 (406)
T 2gek_A 332 ---------------------------------PVDDADGMAAALI----------------------------GILEDD 350 (406)
T ss_dssp ---------------------------------CTTCHHHHHHHHH----------------------------HHHHCH
T ss_pred ---------------------------------CCCCHHHHHHHHH----------------------------HHHcCH
Confidence 2233455554443 234477
Q ss_pred HHHHHHHHHHhccCCCCChHHHHHHHHHHHh
Q 003188 802 KKWLKMSILSTAGSGKFSSDRTIAQYAKEIW 832 (840)
Q Consensus 802 ~~W~~~~~~n~a~~g~FSsDrti~eYa~~iw 832 (840)
+.+.++...+-...-.|||++.+++|.+-+-
T Consensus 351 ~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~ 381 (406)
T 2gek_A 351 QLRAGYVARASERVHRYDWSVVSAQIMRVYE 381 (406)
T ss_dssp HHHHHHHHHHHHHGGGGBHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 7777666555443337999999998876544
No 20
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=98.22 E-value=4.5e-06 Score=79.39 Aligned_cols=104 Identities=19% Similarity=0.180 Sum_probs=76.0
Q ss_pred ceEeecccchhhhhhhhhhhHHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcCCCC
Q 003188 565 LFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNS 644 (840)
Q Consensus 565 l~d~~vkR~heYKRq~Lnll~ii~~y~~ik~~~p~~~~~~~p~~~If~GKA~P~y~~aK~iIk~I~~la~~in~d~~~~~ 644 (840)
+.++++.|+..+|+.++ ++..+.++ +. + .+..+++.|.+.. ...+.+++.+.. -
T Consensus 3 ~~i~~~G~~~~~Kg~~~-li~a~~~l---~~-~-------~~~~l~i~G~g~~----~~~~~~~~~~~~----------~ 56 (166)
T 3qhp_A 3 FKIAMVGRYSNEKNQSV-LIKAVALS---KY-K-------QDIVLLLKGKGPD----EKKIKLLAQKLG----------V 56 (166)
T ss_dssp EEEEEESCCSTTTTHHH-HHHHHHTC---TT-G-------GGEEEEEECCSTT----HHHHHHHHHHHT----------C
T ss_pred eEEEEEeccchhcCHHH-HHHHHHHh---cc-C-------CCeEEEEEeCCcc----HHHHHHHHHHcC----------C
Confidence 67889999999999999 88877664 22 1 2578999997643 122223332222 1
Q ss_pred cceEEEEcCCCHHHHhhhccCccccccCCCCCccCCCcchhHHhhcCc-eEeeecC
Q 003188 645 YLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGC-LIIGTLD 699 (840)
Q Consensus 645 ~lkVvFl~nYnvslA~~ii~gaDv~l~iS~a~~EAsGTs~MKam~NGa-l~i~tlD 699 (840)
+|.| .-.+-+-...++..||+...||+ .|..|++-+-+|..|. +.|+|-+
T Consensus 57 --~v~~-g~~~~~~~~~~~~~adv~v~ps~--~e~~~~~~~Eama~G~vPvi~~~~ 107 (166)
T 3qhp_A 57 --KAEF-GFVNSNELLEILKTCTLYVHAAN--VESEAIACLEAISVGIVPVIANSP 107 (166)
T ss_dssp --EEEC-CCCCHHHHHHHHTTCSEEEECCC--SCCCCHHHHHHHHTTCCEEEECCT
T ss_pred --eEEE-eecCHHHHHHHHHhCCEEEECCc--ccCccHHHHHHHhcCCCcEEeeCC
Confidence 5666 44455666778999999999999 8999999999999998 8887543
No 21
>3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A*
Probab=98.20 E-value=0.00012 Score=84.10 Aligned_cols=126 Identities=13% Similarity=0.071 Sum_probs=87.5
Q ss_pred CCceEeecccchhhhhhhhhhhHHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCC-HHHHHHHHHHHHHHhhhcCCcC
Q 003188 563 NSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATY-TNAKRIVKLVNDVGEVVNTDPE 641 (840)
Q Consensus 563 ~~l~d~~vkR~heYKRq~Lnll~ii~~y~~ik~~~p~~~~~~~p~~~If~GKA~P~y-~~aK~iIk~I~~la~~in~d~~ 641 (840)
+..++..|.|+...|+... +|..+ ++++ + +|+. ..+++|..|....++ ..-.++-+.+.+++..||..-
T Consensus 280 ~~~lIl~VgRLd~~KGi~~-lL~Af-~ll~--~-~P~~----~~v~Lv~Vg~psr~~~~~y~~l~~~l~~lv~~in~~~- 349 (496)
T 3t5t_A 280 GHRLVVHSGRTDPIKNAER-AVRAF-VLAA--R-GGGL----EKTRMLVRMNPNRLYVPANADYVHRVETAVAEANAEL- 349 (496)
T ss_dssp TSEEEEEEEESSGGGCHHH-HHHHH-HHHH--H-TSSC----TTEEEEEEEECCCTTSHHHHHHHHHHHHHHHHHHHHH-
T ss_pred CceEEEEcccCccccCHHH-HHHHH-HHHH--h-Cccc----ceEEEEEEECCCCCCchHHHHHHHHHHHHHHHhcccc-
Confidence 4578889999999999999 88888 7654 3 4542 146777666544333 222345566777777665211
Q ss_pred CCCcceEEEEcCCCHHHHhhhccCccccccCCCCCccCCCcchhHHhhc----CceEeeecCchh
Q 003188 642 VNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLN----GCLIIGTLDGAN 702 (840)
Q Consensus 642 ~~~~lkVvFl~nYnvslA~~ii~gaDv~l~iS~a~~EAsGTs~MKam~N----Gal~i~tlDGan 702 (840)
+..+|.|+..-+.+---.++.+|||++.+|+ .|.-|+--+-+|.- |.+.+|..-|+-
T Consensus 350 --g~~~V~f~g~v~~~el~aly~~ADv~vv~Sl--rEGfgLv~~EamA~~~~~g~lVlSe~aGa~ 410 (496)
T 3t5t_A 350 --GSDTVRIDNDNDVNHTIACFRRADLLIFNST--VDGQNLSTFEAPLVNERDADVILSETCGAA 410 (496)
T ss_dssp --CTTSEEEEECCCHHHHHHHHHHCSEEEECCS--SBSCCSHHHHHHHHCSSCCEEEEETTBTTH
T ss_pred --CCcCEEEeCCCCHHHHHHHHHhccEEEECcc--cccCChhHHHHHHhCCCCCCEEEeCCCCCH
Confidence 0115888765445445678999999999999 89999999999875 577776666663
No 22
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=98.14 E-value=4.5e-06 Score=81.22 Aligned_cols=130 Identities=16% Similarity=0.080 Sum_probs=98.7
Q ss_pred CCCCCCCCceEeecccchhhhhhhhhhhHHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhh
Q 003188 557 GVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVV 636 (840)
Q Consensus 557 G~~~dp~~l~d~~vkR~heYKRq~Lnll~ii~~y~~ik~~~p~~~~~~~p~~~If~GKA~P~y~~aK~iIk~I~~la~~i 636 (840)
+..++++.++++++.|+..+|+.++ ++..+.++ . ++++++.|.+.... .+.+++.++..
T Consensus 16 ~~~~~~~~~~i~~~G~~~~~Kg~~~-li~a~~~l----~----------~~~l~i~G~~~~~~----~l~~~~~~~~~-- 74 (177)
T 2f9f_A 16 KFKFKCYGDFWLSVNRIYPEKRIEL-QLEVFKKL----Q----------DEKLYIVGWFSKGD----HAERYARKIMK-- 74 (177)
T ss_dssp TCCCCCCCSCEEEECCSSGGGTHHH-HHHHHHHC----T----------TSCEEEEBCCCTTS----THHHHHHHHHH--
T ss_pred ccccCCCCCEEEEEeccccccCHHH-HHHHHHhC----C----------CcEEEEEecCccHH----HHHHHHHhhhc--
Confidence 4567788899999999999999998 77665443 1 45788888765542 22334442221
Q ss_pred cCCcCCCCcceEEEEcCCCHHHHhhhccCccccccCCCCCccCCCcchhHHhhcCceEeeecCchhHHHHHHhcCcceEe
Q 003188 637 NTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFL 716 (840)
Q Consensus 637 n~d~~~~~~lkVvFl~nYnvslA~~ii~gaDv~l~iS~a~~EAsGTs~MKam~NGal~i~tlDGanvEi~~~vG~~N~~~ 716 (840)
.+++ +|.|+...+-+-...++..||+...+|+ .|..|++-+-+|..|.+.|+|-.|...|+++. ++++++
T Consensus 75 ----~l~~--~v~~~g~~~~~e~~~~~~~adi~v~ps~--~e~~~~~~~Eama~G~PvI~~~~~~~~e~i~~--~~~g~~ 144 (177)
T 2f9f_A 75 ----IAPD--NVKFLGSVSEEELIDLYSRCKGLLCTAK--DEDFGLTPIEAMASGKPVIAVNEGGFKETVIN--EKTGYL 144 (177)
T ss_dssp ----HSCT--TEEEEESCCHHHHHHHHHHCSEEEECCS--SCCSCHHHHHHHHTTCCEEEESSHHHHHHCCB--TTTEEE
T ss_pred ----ccCC--cEEEeCCCCHHHHHHHHHhCCEEEeCCC--cCCCChHHHHHHHcCCcEEEeCCCCHHHHhcC--CCccEE
Confidence 1455 7889988887777889999999999999 99999999999999999999988887665543 357777
Q ss_pred e
Q 003188 717 F 717 (840)
Q Consensus 717 f 717 (840)
+
T Consensus 145 ~ 145 (177)
T 2f9f_A 145 V 145 (177)
T ss_dssp E
T ss_pred e
Confidence 7
No 23
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=98.12 E-value=7.3e-06 Score=80.15 Aligned_cols=130 Identities=18% Similarity=0.108 Sum_probs=95.5
Q ss_pred HHhCCCCCCCCceEeecccch-hhhhhhhhhhHHHHHHH--HHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHH
Q 003188 554 RVTGVTIDPNSLFDIQVKRIH-EYKRQLLNILGAIYRYK--KLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVN 630 (840)
Q Consensus 554 ~~~G~~~dp~~l~d~~vkR~h-eYKRq~Lnll~ii~~y~--~ik~~~p~~~~~~~p~~~If~GKA~P~y~~aK~iIk~I~ 630 (840)
+++|++ +.++++++.|+. .+|+.++ ++..+.++. + . . .++++++.|.+.|.+.. .+.
T Consensus 29 ~~~~~~---~~~~i~~~G~~~~~~K~~~~-li~a~~~l~~~~--~-~-------~~~~l~i~G~~~~~~~~------~l~ 88 (200)
T 2bfw_A 29 SKFGMD---EGVTFMFIGRFDRGQKGVDV-LLKAIEILSSKK--E-F-------QEMRFIIIGKGDPELEG------WAR 88 (200)
T ss_dssp HHTTCC---SCEEEEEESCBCSSSSCHHH-HHHHHHHHTTSG--G-G-------GGEEEEEECCBCHHHHH------HHH
T ss_pred HHcCCC---CCCEEEEeeccccccCCHHH-HHHHHHHHHhhc--c-C-------CCeEEEEECCCChHHHH------HHH
Confidence 466764 345888999999 9999999 888777663 2 2 1 25799999997763332 344
Q ss_pred HHHhhhcCCcCCCCcceEEE-EcCCCHHHHhhhccCccccccCCCCCccCCCcchhHHhhcCceEeeecCchhHHHHHHh
Q 003188 631 DVGEVVNTDPEVNSYLKVVF-VPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEI 709 (840)
Q Consensus 631 ~la~~in~d~~~~~~lkVvF-l~nYnvslA~~ii~gaDv~l~iS~a~~EAsGTs~MKam~NGal~i~tlDGanvEi~~~v 709 (840)
++.+. .+ +|.| +...+-+-...++..||+.+.+|+ .|++|++-+-+|..|.+.|+|-.|+.-|++
T Consensus 89 ~~~~~------~~---~v~~~~g~~~~~~~~~~~~~ad~~l~ps~--~e~~~~~~~Ea~a~G~PvI~~~~~~~~e~~--- 154 (200)
T 2bfw_A 89 SLEEK------HG---NVKVITEMLSREFVRELYGSVDFVIIPSY--FEPFGLVALEAMCLGAIPIASAVGGLRDII--- 154 (200)
T ss_dssp HHHHH------CT---TEEEECSCCCHHHHHHHHTTCSEEEECCS--CCSSCHHHHHHHHTTCEEEEESCHHHHHHC---
T ss_pred HHHHh------cC---CEEEEeccCCHHHHHHHHHHCCEEEECCC--CCCccHHHHHHHHCCCCEEEeCCCChHHHc---
Confidence 44443 11 6888 666665566788999999999999 799999999999999999999777765554
Q ss_pred cCcceEee
Q 003188 710 GEENFFLF 717 (840)
Q Consensus 710 G~~N~~~f 717 (840)
.+++++++
T Consensus 155 ~~~~g~~~ 162 (200)
T 2bfw_A 155 TNETGILV 162 (200)
T ss_dssp CTTTCEEE
T ss_pred CCCceEEe
Confidence 23455554
No 24
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=97.90 E-value=2.3e-05 Score=83.12 Aligned_cols=114 Identities=18% Similarity=0.161 Sum_probs=83.6
Q ss_pred CCceEeecccchhhhhhhhhhhHHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcCC
Q 003188 563 NSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEV 642 (840)
Q Consensus 563 ~~l~d~~vkR~heYKRq~Lnll~ii~~y~~ik~~~p~~~~~~~p~~~If~GKA~P~y~~aK~iIk~I~~la~~in~d~~~ 642 (840)
+..+.+++.|+..+|+.++ ++..+.++ +..+++.|.+. +.. .+.++++..
T Consensus 161 ~~~~i~~vG~~~~~Kg~~~-li~a~~~~---------------~~~l~i~G~g~--~~~------~l~~~~~~~------ 210 (342)
T 2iuy_A 161 KEDFLLFMGRVSPHKGALE-AAAFAHAC---------------GRRLVLAGPAW--EPE------YFDEITRRY------ 210 (342)
T ss_dssp CCSCEEEESCCCGGGTHHH-HHHHHHHH---------------TCCEEEESCCC--CHH------HHHHHHHHH------
T ss_pred CCCEEEEEeccccccCHHH-HHHHHHhc---------------CcEEEEEeCcc--cHH------HHHHHHHHh------
Confidence 4567899999999999999 87766543 24688889874 221 233344332
Q ss_pred CCcceEEEEcCCCHHHHhhhccCccccccCCCC--------CccCCCcchhHHhhcCceEeeecCchhHHHHHH
Q 003188 643 NSYLKVVFVPNYNVSVAELLIPGSELSQHISTA--------GMEASGTSNMKFSLNGCLIIGTLDGANVEIRQE 708 (840)
Q Consensus 643 ~~~lkVvFl~nYnvslA~~ii~gaDv~l~iS~a--------~~EAsGTs~MKam~NGal~i~tlDGanvEi~~~ 708 (840)
++ +|.|+..-+-.-...++.+||+...||+. -.|+.|++-+-||..|.+.|+|--|..-|+++.
T Consensus 211 ~~--~v~~~g~~~~~~l~~~~~~adv~v~ps~~~~~~~~~~~~E~~~~~~~EAma~G~PvI~s~~~~~~e~~~~ 282 (342)
T 2iuy_A 211 GS--TVEPIGEVGGERRLDLLASAHAVLAMSQAVTGPWGGIWCEPGATVVSEAAVSGTPVVGTGNGCLAEIVPS 282 (342)
T ss_dssp TT--TEEECCCCCHHHHHHHHHHCSEEEECCCCCCCTTCSCCCCCCCHHHHHHHHTTCCEEECCTTTHHHHGGG
T ss_pred CC--CEEEeccCCHHHHHHHHHhCCEEEECCcccccccccccccCccHHHHHHHhcCCCEEEcCCCChHHHhcc
Confidence 13 68887766655557788999999999982 169999999999999999999977776555543
No 25
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=97.44 E-value=0.002 Score=73.31 Aligned_cols=111 Identities=12% Similarity=0.120 Sum_probs=76.6
Q ss_pred HhCCCCCCCCceEeecccchhhhhhhhhhhHHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHh
Q 003188 555 VTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGE 634 (840)
Q Consensus 555 ~~G~~~dp~~l~d~~vkR~heYKRq~Lnll~ii~~y~~ik~~~p~~~~~~~p~~~If~GKA~P~y~~aK~iIk~I~~la~ 634 (840)
++|++ ++ .+..++.|+.. |+.+. ++..+.++.+ . .| ...+++.|...| .. .. +.+.++
T Consensus 370 ~~~~~--~~-~~v~~~g~~~~-K~~~~-li~a~~~l~~--~-~~-------~~~l~i~G~~g~--~~-~~----l~~~~~ 427 (568)
T 2vsy_A 370 QCGLP--EQ-GVVLCCFNNSY-KLNPQ-SMARMLAVLR--E-VP-------DSVLWLLSGPGE--AD-AR----LRAFAH 427 (568)
T ss_dssp GGTCC--TT-SCEEEECCCGG-GCCHH-HHHHHHHHHH--H-CT-------TCEEEEECCSTT--HH-HH----HHHHHH
T ss_pred ccCCC--CC-CEEEEeCCccc-cCCHH-HHHHHHHHHH--h-CC-------CcEEEEecCCHH--HH-HH----HHHHHH
Confidence 45654 33 34458899999 99999 8888877654 2 22 467888885222 21 22 233332
Q ss_pred hhcCCcCCC-CcceEEEEcCCCHHHHhhhccCccccccCCCCCccCCCcchhHHhhcCceEee
Q 003188 635 VVNTDPEVN-SYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIG 696 (840)
Q Consensus 635 ~in~d~~~~-~~lkVvFl~nYnvslA~~ii~gaDv~l~iS~a~~EAsGTs~MKam~NGal~i~ 696 (840)
.. .+. + +|.|+..-+-+--..++.+||+++.||+ + ..|+.-+=+|..|.+.|+
T Consensus 428 ~~----~l~~~--~v~~~g~~~~~~~~~~~~~adv~v~ps~--~-~~g~~~lEAma~G~Pvv~ 481 (568)
T 2vsy_A 428 AQ----GVDAQ--RLVFMPKLPHPQYLARYRHADLFLDTHP--Y-NAHTTASDALWTGCPVLT 481 (568)
T ss_dssp HT----TCCGG--GEEEECCCCHHHHHHHGGGCSEEECCSS--S-CCSHHHHHHHHTTCCEEB
T ss_pred Hc----CCChh--HEEeeCCCCHHHHHHHHhcCCEEeeCCC--C-CCcHHHHHHHhCCCCEEe
Confidence 21 133 5 7888876554455677899999999999 6 899999999999998887
No 26
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=97.09 E-value=0.0052 Score=65.71 Aligned_cols=117 Identities=14% Similarity=0.016 Sum_probs=73.7
Q ss_pred ceEeecccchhh-hhhhhhhhHHHHHHHHHhhcCccccCCCCCeEEEEE-ecCCcCCHHHHHHHHHHHHHHhhhcCCcCC
Q 003188 565 LFDIQVKRIHEY-KRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIG-GKAFATYTNAKRIVKLVNDVGEVVNTDPEV 642 (840)
Q Consensus 565 l~d~~vkR~heY-KRq~Lnll~ii~~y~~ik~~~p~~~~~~~p~~~If~-GKA~P~y~~aK~iIk~I~~la~~in~d~~~ 642 (840)
.+.+++.|+..+ |+... ++..+.++.+ . . .+.++++. |. .|.+ .+.+.++.. .
T Consensus 207 ~vl~~~gr~~~~~kg~~~-li~a~~~l~~--~-~-------~~~~l~i~~g~-~~~~------~~~l~~~~~---~---- 261 (384)
T 1vgv_A 207 MILVTGHRRESFGRGFEE-ICHALADIAT--T-H-------QDIQIVYPVHL-NPNV------REPVNRILG---H---- 261 (384)
T ss_dssp EEEEECCCBSSCCHHHHH-HHHHHHHHHH--H-C-------TTEEEEEECCB-CHHH------HHHHHHHHT---T----
T ss_pred EEEEEeCCccccchHHHH-HHHHHHHHHh--h-C-------CCeEEEEEcCC-CHHH------HHHHHHHhh---c----
Confidence 467799999887 98887 7777776644 2 1 14677774 43 2211 122333321 1
Q ss_pred CCcceEEEEcCCCHHHHhhhccCccccccCCCCCccCCCcchhHHhhcCceEeeecC-chhHHHHHHhcCcceEeec
Q 003188 643 NSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLD-GANVEIRQEIGEENFFLFG 718 (840)
Q Consensus 643 ~~~lkVvFl~nYnvslA~~ii~gaDv~l~iS~a~~EAsGTs~MKam~NGal~i~tlD-GanvEi~~~vG~~N~~~fG 718 (840)
.+ +|.|+...+-+--..++++||++..+| |+.-+=||..|.+.|+|-. |..-|+++. + +++++.
T Consensus 262 ~~--~v~~~g~~~~~~~~~~~~~ad~~v~~S-------g~~~lEA~a~G~PvI~~~~~~~~~e~v~~--g-~g~lv~ 326 (384)
T 1vgv_A 262 VK--NVILIDPQEYLPFVWLMNHAWLILTDS-------GGIQEEAPSLGKPVLVMRDTTERPEAVTA--G-TVRLVG 326 (384)
T ss_dssp CT--TEEEECCCCHHHHHHHHHHCSEEEESS-------STGGGTGGGGTCCEEEESSCCSCHHHHHH--T-SEEEEC
T ss_pred CC--CEEEeCCCCHHHHHHHHHhCcEEEECC-------cchHHHHHHcCCCEEEccCCCCcchhhhC--C-ceEEeC
Confidence 13 688874333344567789999999887 4447899999999999965 665565533 2 555553
No 27
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=97.07 E-value=0.00087 Score=74.60 Aligned_cols=105 Identities=10% Similarity=0.055 Sum_probs=76.1
Q ss_pred CCceEeecccc-hhhhhhhhhhhHHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcC
Q 003188 563 NSLFDIQVKRI-HEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPE 641 (840)
Q Consensus 563 ~~l~d~~vkR~-heYKRq~Lnll~ii~~y~~ik~~~p~~~~~~~p~~~If~GKA~P~y~~aK~iIk~I~~la~~in~d~~ 641 (840)
+..+++++.|+ .+.|+.++ ++..+.++.+ . .|+. .+..++++|.+.+... + .
T Consensus 240 ~~~~il~~gr~~~~~Kg~~~-li~A~~~l~~--~-~~~~----~~~~l~ivG~~~~~~~---------------l----~ 292 (413)
T 2x0d_A 240 KEKIILVYGRPSVKRNAFTL-IVEALKIFVQ--K-YDRS----NEWKIISVGEKHKDIA---------------L----G 292 (413)
T ss_dssp CCSEEEEEECTTCGGGCHHH-HHHHHHHHHH--H-CTTG----GGCEEEEEESCCCCEE---------------E----E
T ss_pred CCCEEEEEecCchhccCHHH-HHHHHHHHHH--h-CCCC----CceEEEEEcCCchhhh---------------c----C
Confidence 34566677886 68899998 8888877654 2 2210 1368999998754311 0 1
Q ss_pred CCCcceEEEEcCCCHHHHhhhccCccccccCCCCCccCCCcchhHHhhcCceEeeec
Q 003188 642 VNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTL 698 (840)
Q Consensus 642 ~~~~lkVvFl~nYnvslA~~ii~gaDv~l~iS~a~~EAsGTs~MKam~NGal~i~tl 698 (840)
..+ +|.|+..-.-+--..++++||++..+|+ .|..|..-+=||.-|.+.|++-
T Consensus 293 ~~~--~v~f~G~~~~~~l~~~~~~adv~v~pS~--~E~~g~~~lEAmA~G~PVV~~~ 345 (413)
T 2x0d_A 293 KGI--HLNSLGKLTLEDYADLLKRSSIGISLMI--SPHPSYPPLEMAHFGLRVITNK 345 (413)
T ss_dssp TTE--EEEEEESCCHHHHHHHHHHCCEEECCCS--SSSCCSHHHHHHHTTCEEEEEC
T ss_pred CcC--cEEEcCCCCHHHHHHHHHhCCEEEEecC--CCCCCcHHHHHHhCCCcEEEeC
Confidence 233 7888876555555678899999999999 8999999999999999999863
No 28
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=96.97 E-value=0.0049 Score=65.54 Aligned_cols=111 Identities=14% Similarity=0.061 Sum_probs=71.9
Q ss_pred CCceEeecccchhh-hhhhhhhhHHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcC
Q 003188 563 NSLFDIQVKRIHEY-KRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPE 641 (840)
Q Consensus 563 ~~l~d~~vkR~heY-KRq~Lnll~ii~~y~~ik~~~p~~~~~~~p~~~If~GKA~P~y~~aK~iIk~I~~la~~in~d~~ 641 (840)
+..+.+.+.|+... |+... ++..+.++.+ . .| ..++|++ .+|. .. +.+.+.++..
T Consensus 205 ~~~vl~~~gr~~~~~K~~~~-li~a~~~l~~--~-~~-------~~~~i~~--~g~~-~~---~~~~~~~~~~------- 260 (375)
T 3beo_A 205 NRLVLMTAHRRENLGEPMRN-MFRAIKRLVD--K-HE-------DVQVVYP--VHMN-PV---VRETANDILG------- 260 (375)
T ss_dssp SEEEEEECCCGGGTTHHHHH-HHHHHHHHHH--H-CT-------TEEEEEE--CCSC-HH---HHHHHHHHHT-------
T ss_pred CCeEEEEecccccchhHHHH-HHHHHHHHHh--h-CC-------CeEEEEe--CCCC-HH---HHHHHHHHhh-------
Confidence 44567789999876 99988 8887776643 2 11 3566664 2342 21 2223333321
Q ss_pred CCCcceEEEEcCCCHHHHhhhccCccccccCCCCCccCCCcchhHHhhcCceEeeecC-chhHHHH
Q 003188 642 VNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLD-GANVEIR 706 (840)
Q Consensus 642 ~~~~lkVvFl~nYnvslA~~ii~gaDv~l~iS~a~~EAsGTs~MKam~NGal~i~tlD-GanvEi~ 706 (840)
..+ +|.|+...+-.-...++++||+...+| |+.-+=||..|.+.|+|.+ |..-|++
T Consensus 261 ~~~--~v~~~g~~~~~~~~~~~~~ad~~v~~s-------g~~~lEA~a~G~Pvi~~~~~~~~~e~v 317 (375)
T 3beo_A 261 DYG--RIHLIEPLDVIDFHNVAARSYLMLTDS-------GGVQEEAPSLGVPVLVLRDTTERPEGI 317 (375)
T ss_dssp TCT--TEEEECCCCHHHHHHHHHTCSEEEECC-------HHHHHHHHHHTCCEEECSSCCSCHHHH
T ss_pred ccC--CEEEeCCCCHHHHHHHHHhCcEEEECC-------CChHHHHHhcCCCEEEecCCCCCceee
Confidence 113 688876555555667889999999877 4557789999999998865 6555554
No 29
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=96.51 E-value=0.018 Score=63.54 Aligned_cols=92 Identities=12% Similarity=0.031 Sum_probs=70.2
Q ss_pred ceEeecccchhhhhhhhhhhHHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcCCCC
Q 003188 565 LFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNS 644 (840)
Q Consensus 565 l~d~~vkR~heYKRq~Lnll~ii~~y~~ik~~~p~~~~~~~p~~~If~GKA~P~y~~aK~iIk~I~~la~~in~d~~~~~ 644 (840)
+..+++.|+..+|+. +..+.+ . . .++.+++.|.+. + .+....+
T Consensus 223 ~~i~~vGrl~~~Kg~-------~~~l~~--~-~-------~~~~l~ivG~g~----------------~----~~~~l~~ 265 (406)
T 2hy7_A 223 IHAVAVGSMLFDPEF-------FVVASK--A-F-------PQVTFHVIGSGM----------------G----RHPGYGD 265 (406)
T ss_dssp EEEEEECCTTBCHHH-------HHHHHH--H-C-------TTEEEEEESCSS----------------C----CCTTCCT
T ss_pred cEEEEEeccccccCH-------HHHHHH--h-C-------CCeEEEEEeCch----------------H----HhcCCCC
Confidence 788999999999998 222222 1 1 257899999764 1 1122455
Q ss_pred cceEEEEcCCCHHHHhhhccCccccccCCCCCccCCCcchhHHh-------hcCceEeee
Q 003188 645 YLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFS-------LNGCLIIGT 697 (840)
Q Consensus 645 ~lkVvFl~nYnvslA~~ii~gaDv~l~iS~a~~EAsGTs~MKam-------~NGal~i~t 697 (840)
+|.|+.--.-+--..++++||++..||+ .|..|..-+-+| ..|.+.|+|
T Consensus 266 --~V~f~G~~~~~~l~~~~~~adv~v~ps~--~E~~~~~~lEAm~Kl~eYla~G~PVIas 321 (406)
T 2hy7_A 266 --NVIVYGEMKHAQTIGYIKHARFGIAPYA--SEQVPVYLADSSMKLLQYDFFGLPAVCP 321 (406)
T ss_dssp --TEEEECCCCHHHHHHHHHTCSEEECCBS--CSCCCTTHHHHCHHHHHHHHHTCCEEEE
T ss_pred --CEEEcCCCCHHHHHHHHHhcCEEEECCC--cccCchHHHHHHHHHHHHhhCCCcEEEe
Confidence 7889876555555678899999999999 899999999999 999999988
No 30
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=96.18 E-value=0.012 Score=62.47 Aligned_cols=101 Identities=6% Similarity=-0.095 Sum_probs=65.8
Q ss_pred CCCc-eEeecccchhhhhhhhhhhHHHHHHHHHhhcCccccCCCCCeE-EEEEecCCcCCHHHHHHHHHHHHHHhhhcCC
Q 003188 562 PNSL-FDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRT-IMIGGKAFATYTNAKRIVKLVNDVGEVVNTD 639 (840)
Q Consensus 562 p~~l-~d~~vkR~heYKRq~Lnll~ii~~y~~ik~~~p~~~~~~~p~~-~If~GKA~P~y~~aK~iIk~I~~la~~in~d 639 (840)
++.+ +.+.+.|+...|+.++ ++..+.++.+ +.. ++++|.+.. +++.+++.++.
T Consensus 181 ~~~~~il~~~g~~~~~k~~~~-li~a~~~l~~-------------~~~~l~i~G~~~~-----~~l~~~~~~~~------ 235 (364)
T 1f0k_A 181 EGPVRVLVVGGSQGARILNQT-MPQVAAKLGD-------------SVTIWHQSGKGSQ-----QSVEQAYAEAG------ 235 (364)
T ss_dssp CSSEEEEEECTTTCCHHHHHH-HHHHHHHHGG-------------GEEEEEECCTTCH-----HHHHHHHHHTT------
T ss_pred CCCcEEEEEcCchHhHHHHHH-HHHHHHHhcC-------------CcEEEEEcCCchH-----HHHHHHHhhcC------
Confidence 4444 5567789999999988 7776655421 345 577888761 22222222211
Q ss_pred cCCCCcceEEEEcCCCHHHHhhhccCccccccCCCCCccCCCcchhHHhhcCceEeeecCc
Q 003188 640 PEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDG 700 (840)
Q Consensus 640 ~~~~~~lkVvFl~nYnvslA~~ii~gaDv~l~iS~a~~EAsGTs~MKam~NGal~i~tlDG 700 (840)
+ + +|.|+..- +-...++++||+...+|. |++-+-+|..|.+.|+|--|
T Consensus 236 --~-~--~v~~~g~~--~~~~~~~~~ad~~v~~sg------~~~~~EAma~G~Pvi~~~~~ 283 (364)
T 1f0k_A 236 --Q-P--QHKVTEFI--DDMAAAYAWADVVVCRSG------ALTVSEIAAAGLPALFVPFQ 283 (364)
T ss_dssp --C-T--TSEEESCC--SCHHHHHHHCSEEEECCC------HHHHHHHHHHTCCEEECCCC
T ss_pred --C-C--ceEEecch--hhHHHHHHhCCEEEECCc------hHHHHHHHHhCCCEEEeeCC
Confidence 1 2 46666543 334567899999999982 67788999999999988444
No 31
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=93.73 E-value=0.66 Score=49.30 Aligned_cols=109 Identities=14% Similarity=0.039 Sum_probs=65.8
Q ss_pred CCceEeecccchhhhhhhhhhhHHHHHHHHHhhcCccccCCCCCeEEEEE-ecCCcCCHHHHHHHHHHHHHHhhhcCCcC
Q 003188 563 NSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIG-GKAFATYTNAKRIVKLVNDVGEVVNTDPE 641 (840)
Q Consensus 563 ~~l~d~~vkR~heYKRq~Lnll~ii~~y~~ik~~~p~~~~~~~p~~~If~-GKA~P~y~~aK~iIk~I~~la~~in~d~~ 641 (840)
+..+.+.+.|+..+|+... ++..+.++.+ . .| ..++++. |.+ | .. -+.+.+.+. .
T Consensus 198 ~~~vl~~~gr~~~~k~~~~-ll~a~~~l~~--~-~~-------~~~lv~~~g~~-~--~~----~~~l~~~~~---~--- 253 (376)
T 1v4v_A 198 GPYVTVTMHRRENWPLLSD-LAQALKRVAE--A-FP-------HLTFVYPVHLN-P--VV----REAVFPVLK---G--- 253 (376)
T ss_dssp SCEEEECCCCGGGGGGHHH-HHHHHHHHHH--H-CT-------TSEEEEECCSC-H--HH----HHHHHHHHT---T---
T ss_pred CCEEEEEeCcccchHHHHH-HHHHHHHHHh--h-CC-------CeEEEEECCCC-H--HH----HHHHHHHhc---c---
Confidence 4456678999999996666 7666665533 2 12 3567764 643 2 11 112333321 1
Q ss_pred CCCcceEEEEcCCCHHHHhhhccCccccccCCCCCccCCCcchhHHhhcCceEeeecC-chhHHH
Q 003188 642 VNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLD-GANVEI 705 (840)
Q Consensus 642 ~~~~lkVvFl~nYnvslA~~ii~gaDv~l~iS~a~~EAsGTs~MKam~NGal~i~tlD-GanvEi 705 (840)
.+ +|.|+...+-.--..++++||++..+| .|+ .+=||..|.+.|.|-+ |...|+
T Consensus 254 -~~--~v~~~g~~g~~~~~~~~~~ad~~v~~S------~g~-~lEA~a~G~PvI~~~~~~~~~~~ 308 (376)
T 1v4v_A 254 -VR--NFVLLDPLEYGSMAALMRASLLLVTDS------GGL-QEEGAALGVPVVVLRNVTERPEG 308 (376)
T ss_dssp -CT--TEEEECCCCHHHHHHHHHTEEEEEESC------HHH-HHHHHHTTCCEEECSSSCSCHHH
T ss_pred -CC--CEEEECCCCHHHHHHHHHhCcEEEECC------cCH-HHHHHHcCCCEEeccCCCcchhh
Confidence 23 688886444434456789999998776 244 5589999999997643 444443
No 32
>3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A
Probab=63.45 E-value=22 Score=41.98 Aligned_cols=115 Identities=10% Similarity=0.042 Sum_probs=69.1
Q ss_pred CCCCCCCCceEeecccchhhhhhhhhhhHHHHHHHHHhhcCccccCCCCCeEEEE-EecCCcCCHHHHHHHHHHHHHHhh
Q 003188 557 GVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMI-GGKAFATYTNAKRIVKLVNDVGEV 635 (840)
Q Consensus 557 G~~~dp~~l~d~~vkR~heYKRq~Lnll~ii~~y~~ik~~~p~~~~~~~p~~~If-~GKA~P~y~~aK~iIk~I~~la~~ 635 (840)
|++-+...++.+-.-|+ +|.-.- ++....+.++ . -|+ ++-++| .|.+ ++-. ...++.+....
T Consensus 434 ~lp~~~G~v~Fg~fn~~--~Ki~p~-~l~~WarIL~--~-vP~------s~L~l~~~g~~-~g~~--~~~~~~~~~~G-- 496 (631)
T 3q3e_A 434 LLRENPEVVNIGIASTT--MKLNPY-FLEALKAIRD--R-AKV------KVHFHFALGQS-NGIT--HPYVERFIKSY-- 496 (631)
T ss_dssp CCCSCCSEEEEEEEECS--TTCCHH-HHHHHHHHHH--H-CSS------EEEEEEEESSC-CGGG--HHHHHHHHHHH--
T ss_pred cCCcCCCeEEEEECCcc--ccCCHH-HHHHHHHHHH--h-CCC------cEEEEEecCCC-chhh--HHHHHHHHHcC--
Confidence 44322336766666775 798777 7776666544 2 221 233333 4542 2222 22333332222
Q ss_pred hcCCcCCCCcceEEEEcCCCHHHHh--hhccCccccccCCCCCccCCCcchhHHhhcCceEeeecCchh
Q 003188 636 VNTDPEVNSYLKVVFVPNYNVSVAE--LLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGAN 702 (840)
Q Consensus 636 in~d~~~~~~lkVvFl~nYnvslA~--~ii~gaDv~l~iS~a~~EAsGTs~MKam~NGal~i~tlDGan 702 (840)
+.+ +|+|++.-. .++ ..+..|||++-++. +. .||+-+-||--|.+.| |+.|-.
T Consensus 497 ------I~~--Rv~F~g~~p--~~e~la~y~~aDIfLDpfp--y~-GgtTtlEALwmGVPVV-Tl~G~~ 551 (631)
T 3q3e_A 497 ------LGD--SATAHPHSP--YHQYLRILHNCDMMVNPFP--FG-NTNGIIDMVTLGLVGV-CKTGAE 551 (631)
T ss_dssp ------HGG--GEEEECCCC--HHHHHHHHHTCSEEECCSS--SC-CSHHHHHHHHTTCCEE-EECCSS
T ss_pred ------CCc--cEEEcCCCC--HHHHHHHHhcCcEEEeCCc--cc-CChHHHHHHHcCCCEE-eccCCc
Confidence 334 788987644 444 56899999999985 65 5999999999998555 766654
No 33
>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*
Probab=62.31 E-value=18 Score=39.03 Aligned_cols=121 Identities=17% Similarity=0.079 Sum_probs=66.6
Q ss_pred eEeecccchhhhhhhhhhhHHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcCCCCc
Q 003188 566 FDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSY 645 (840)
Q Consensus 566 ~d~~vkR~heYKRq~Lnll~ii~~y~~ik~~~p~~~~~~~p~~~If~GKA~P~y~~aK~iIk~I~~la~~in~d~~~~~~ 645 (840)
+.+.+++ + .|+.++ ++..+.++.+ . . .+.+++++|. .|... .++-+++.+.. +..-....+.
T Consensus 198 vi~~~~~-~-~k~~~~-ll~A~~~l~~--~-~-------p~~~lvivG~-g~~~~--~~l~~~~~~~g--l~~~~~~~~~ 259 (374)
T 2xci_A 198 FIVAGSI-H-TGEVEI-ILKAFKEIKK--T-Y-------SSLKLILVPR-HIENA--KIFEKKARDFG--FKTSFFENLE 259 (374)
T ss_dssp EEEEEEE-C-GGGHHH-HHHHHHHHHT--T-C-------TTCEEEEEES-SGGGH--HHHHHHHHHTT--CCEEETTCCC
T ss_pred EEEEEeC-C-CchHHH-HHHHHHHHHh--h-C-------CCcEEEEECC-CHHHH--HHHHHHHHHCC--CceEEecCCC
Confidence 3344444 3 477777 7776655432 1 1 2478999995 45432 22333333322 0000000000
Q ss_pred ceEEEEcCCCHHHHhhhccCccccccCCCCCc-cCCCcchhHHhhcCceEeeecC-chhHHHHHH
Q 003188 646 LKVVFVPNYNVSVAELLIPGSELSQHISTAGM-EASGTSNMKFSLNGCLIIGTLD-GANVEIRQE 708 (840)
Q Consensus 646 lkVvFl~nYnvslA~~ii~gaDv~l~iS~a~~-EAsGTs~MKam~NGal~i~tlD-GanvEi~~~ 708 (840)
-+| ++.++--.+ ..++++||+...+|. + |.-|.+-+=||..|.+.|++-+ |..-|+++.
T Consensus 260 ~~v-~~~~~~~dl-~~~y~~aDv~vl~ss--~~e~gg~~~lEAmA~G~PVI~~~~~~~~~e~~~~ 320 (374)
T 2xci_A 260 GDV-ILVDRFGIL-KELYPVGKIAIVGGT--FVNIGGHNLLEPTCWGIPVIYGPYTHKVNDLKEF 320 (374)
T ss_dssp SSE-EECCSSSCH-HHHGGGEEEEEECSS--SSSSCCCCCHHHHTTTCCEEECSCCTTSHHHHHH
T ss_pred CcE-EEECCHHHH-HHHHHhCCEEEECCc--ccCCCCcCHHHHHHhCCCEEECCCccChHHHHHH
Confidence 034 445554444 578999999877765 4 4457888899999999996544 444555544
No 34
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=52.78 E-value=1e+02 Score=33.46 Aligned_cols=119 Identities=13% Similarity=0.092 Sum_probs=67.8
Q ss_pred HHHhCCCCCCCC-ceEeecccchhh-hhhhhhhhHHHHHHHHHhhcCccccCCCCCeEEEEE-ecCCcCCHHHHHHHHHH
Q 003188 553 WRVTGVTIDPNS-LFDIQVKRIHEY-KRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIG-GKAFATYTNAKRIVKLV 629 (840)
Q Consensus 553 ~~~~G~~~dp~~-l~d~~vkR~heY-KRq~Lnll~ii~~y~~ik~~~p~~~~~~~p~~~If~-GKA~P~y~~aK~iIk~I 629 (840)
++++|+ ++++. .+.+...|.... |+... ++..+.++.+ . .| .+++|+. |.. |. -+ +.+
T Consensus 220 r~~lg~-l~~~~~~vlv~~hR~~~~~~~~~~-ll~A~~~l~~--~-~~-------~~~~v~~~g~~-~~---~~---~~l 280 (396)
T 3dzc_A 220 ESQFPM-LDASKKLILVTGHRRESFGGGFER-ICQALITTAE--Q-HP-------ECQILYPVHLN-PN---VR---EPV 280 (396)
T ss_dssp HHTCTT-CCTTSEEEEEECSCBCCCTTHHHH-HHHHHHHHHH--H-CT-------TEEEEEECCBC-HH---HH---HHH
T ss_pred HHHhCc-cCCCCCEEEEEECCcccchhHHHH-HHHHHHHHHH--h-CC-------CceEEEEeCCC-hH---HH---HHH
Confidence 356673 12333 345667675544 55443 6666655543 1 12 4678875 432 32 12 223
Q ss_pred HHHHhhhcCCcCCCCcceEEEEcCCC-HHHHhhhccCccccccCCCCCccCCCcchhHHhhcCceEeeecC-chhHHHHH
Q 003188 630 NDVGEVVNTDPEVNSYLKVVFVPNYN-VSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLD-GANVEIRQ 707 (840)
Q Consensus 630 ~~la~~in~d~~~~~~lkVvFl~nYn-vslA~~ii~gaDv~l~iS~a~~EAsGTs~MKam~NGal~i~tlD-GanvEi~~ 707 (840)
.+.. . ..+ +|.|++..+ ..+. .++++||+..-.| |+.+.=+|..|.+.|.+.| |...|.++
T Consensus 281 ~~~~---~----~~~--~v~~~~~lg~~~~~-~l~~~ad~vv~~S-------Gg~~~EA~a~G~PvV~~~~~~~~~e~v~ 343 (396)
T 3dzc_A 281 NKLL---K----GVS--NIVLIEPQQYLPFV-YLMDRAHIILTDS-------GGIQEEAPSLGKPVLVMRETTERPEAVA 343 (396)
T ss_dssp HHHT---T----TCT--TEEEECCCCHHHHH-HHHHHCSEEEESC-------SGGGTTGGGGTCCEEECCSSCSCHHHHH
T ss_pred HHHH---c----CCC--CEEEeCCCCHHHHH-HHHHhcCEEEECC-------ccHHHHHHHcCCCEEEccCCCcchHHHH
Confidence 3321 1 123 588887665 3455 8899999997555 5555899999999997733 44456554
No 35
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=50.45 E-value=60 Score=35.41 Aligned_cols=120 Identities=11% Similarity=0.044 Sum_probs=69.2
Q ss_pred CceEeecccchhh-hhhhhhhhHHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcCC
Q 003188 564 SLFDIQVKRIHEY-KRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEV 642 (840)
Q Consensus 564 ~l~d~~vkR~heY-KRq~Lnll~ii~~y~~ik~~~p~~~~~~~p~~~If~GKA~P~y~~aK~iIk~I~~la~~in~d~~~ 642 (840)
..+.+.+.|.... |+... ++..+.++.+ . .| .++||+.+-..| . +-+.+.+.. . .
T Consensus 225 ~~vlv~~~r~~~~~~~l~~-ll~a~~~l~~--~-~~-------~~~~v~~~~~~~--~----~~~~l~~~~---~----~ 280 (403)
T 3ot5_A 225 RLILMTAHRRENLGEPMQG-MFEAVREIVE--S-RE-------DTELVYPMHLNP--A----VREKAMAIL---G----G 280 (403)
T ss_dssp EEEEECCCCHHHHTTHHHH-HHHHHHHHHH--H-CT-------TEEEEEECCSCH--H----HHHHHHHHH---T----T
T ss_pred CEEEEEeCcccccCcHHHH-HHHHHHHHHH--h-CC-------CceEEEecCCCH--H----HHHHHHHHh---C----C
Confidence 3556677887665 43333 5665555543 1 11 468888632222 1 112233321 1 1
Q ss_pred CCcceEEEEcCCCHHHHhhhccCccccccCCCCCccCCCcchhHHhhcCceEeeecC-chhHHHHHHhcCcceEeecC
Q 003188 643 NSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLD-GANVEIRQEIGEENFFLFGA 719 (840)
Q Consensus 643 ~~~lkVvFl~nYnvslA~~ii~gaDv~l~iS~a~~EAsGTs~MKam~NGal~i~tlD-GanvEi~~~vG~~N~~~fG~ 719 (840)
.+ +|.|++..+-.--..++++||+..-.| |+.++=+|.-|.+.|.+.+ |-+.|+++ .| ++++.+.
T Consensus 281 ~~--~v~l~~~l~~~~~~~l~~~ad~vv~~S-------Gg~~~EA~a~g~PvV~~~~~~~~~e~v~-~g--~~~lv~~ 346 (403)
T 3ot5_A 281 HE--RIHLIEPLDAIDFHNFLRKSYLVFTDS-------GGVQEEAPGMGVPVLVLRDTTERPEGIE-AG--TLKLIGT 346 (403)
T ss_dssp CT--TEEEECCCCHHHHHHHHHHEEEEEECC-------HHHHHHGGGTTCCEEECCSSCSCHHHHH-HT--SEEECCS
T ss_pred CC--CEEEeCCCCHHHHHHHHHhcCEEEECC-------ccHHHHHHHhCCCEEEecCCCcchhhee-CC--cEEEcCC
Confidence 23 588888766545556889999987443 6667899999999997744 55556553 22 4555553
No 36
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=36.91 E-value=79 Score=34.42 Aligned_cols=133 Identities=20% Similarity=0.183 Sum_probs=75.7
Q ss_pred HHhCCCCCCCCceEeecccchhh---hhhhhhhhHHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHH
Q 003188 554 RVTGVTIDPNSLFDIQVKRIHEY---KRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVN 630 (840)
Q Consensus 554 ~~~G~~~dp~~l~d~~vkR~heY---KRq~Lnll~ii~~y~~ik~~~p~~~~~~~p~~~If~GKA~P~y~~aK~iIk~I~ 630 (840)
+++|++ ++..+.+...|..+. |+... ++..+.++.+ . . ..++|+.. ||. +-+.+.
T Consensus 196 ~~lgl~--~~~~iLvt~hr~e~~~~~~~l~~-ll~al~~l~~--~--------~-~~~vv~p~--~p~------~~~~l~ 253 (385)
T 4hwg_A 196 DKLSLT--PKQYFLISSHREENVDVKNNLKE-LLNSLQMLIK--E--------Y-NFLIIFST--HPR------TKKRLE 253 (385)
T ss_dssp HHTTCC--TTSEEEEEECCC-----CHHHHH-HHHHHHHHHH--H--------H-CCEEEEEE--CHH------HHHHHH
T ss_pred HHcCCC--cCCEEEEEeCCchhcCcHHHHHH-HHHHHHHHHh--c--------C-CeEEEEEC--ChH------HHHHHH
Confidence 467764 344566667665433 33333 6666665543 1 0 35777753 453 112232
Q ss_pred HHHhhhcCCcCCCCcceEEEEcCCCHHHHhhhccCccccccCCCCCccCCCcchhHHhhcCceEeeecCch-hHHHHHHh
Q 003188 631 DVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGA-NVEIRQEI 709 (840)
Q Consensus 631 ~la~~in~d~~~~~~lkVvFl~nYnvslA~~ii~gaDv~l~iS~a~~EAsGTs~MKam~NGal~i~tlDGa-nvEi~~~v 709 (840)
+....+.. .+ +|.+++..+-.--..++++||+.. +. ||+.+.=++.-|.+.|.+.+.. +.|.+++
T Consensus 254 ~~~~~~~~----~~--~v~l~~~lg~~~~~~l~~~adlvv--t~-----SGgv~~EA~alG~Pvv~~~~~ter~e~v~~- 319 (385)
T 4hwg_A 254 DLEGFKEL----GD--KIRFLPAFSFTDYVKLQMNAFCIL--SD-----SGTITEEASILNLPALNIREAHERPEGMDA- 319 (385)
T ss_dssp TSGGGGGT----GG--GEEECCCCCHHHHHHHHHHCSEEE--EC-----CTTHHHHHHHTTCCEEECSSSCSCTHHHHH-
T ss_pred HHHHHhcC----CC--CEEEEcCCCHHHHHHHHHhCcEEE--EC-----CccHHHHHHHcCCCEEEcCCCccchhhhhc-
Confidence 22000111 12 688888776544568899999987 32 5888899999999999888865 4666543
Q ss_pred cCcceEeecCccccc
Q 003188 710 GEENFFLFGAVAEQV 724 (840)
Q Consensus 710 G~~N~~~fG~~~d~V 724 (840)
| +..+.|...+++
T Consensus 320 G--~~~lv~~d~~~i 332 (385)
T 4hwg_A 320 G--TLIMSGFKAERV 332 (385)
T ss_dssp T--CCEECCSSHHHH
T ss_pred C--ceEEcCCCHHHH
Confidence 3 344555444433
No 37
>3u7q_B Nitrogenase molybdenum-iron protein beta chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1fp4_B* 1g21_B* 1g20_B* 1m1n_B* 1l5h_B* 1m1y_B* 1m34_B* 1n2c_B* 2afh_B* 2afi_B* 2afk_B* 2min_B* 3k1a_B* 3min_B*
Probab=28.61 E-value=2.2e+02 Score=32.54 Aligned_cols=135 Identities=13% Similarity=0.034 Sum_probs=80.5
Q ss_pred hcccccccCCCCCCHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCceEEEEEehh
Q 003188 15 LAKIPAAANPLANEPSAIASNISYHVQYSPHFSPTKFEPEQAFFATAESVRDRLIQQWNETYHHFNKVDPKQTYYLSMEF 94 (840)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~at~~~~y~ala~~vrd~l~~~w~~t~~~~~~~~~k~vyYlSmEf 94 (840)
+-.+|....+.....+. ..++.+.|...+|+++. +. + ..-|.++.+...+++++. ..|+|..+. +=
T Consensus 308 ~~GiP~i~~~~PiG~~~-T~~~l~~la~~~g~~~~-----~~---i-~~er~r~~~~l~d~~~~l---~GKrvaI~g-d~ 373 (523)
T 3u7q_B 308 TWKHEVPKLNIPMGLDW-TDEFLMKVSEISGQPIP-----AS---L-TKERGRLVDMMTDSHTWL---HGKRFALWG-DP 373 (523)
T ss_dssp TSCCCCCCCCCSCHHHH-HHHHHHHHHHHHCCCCC-----HH---H-HHHHHHHHHHHHHHHHHH---TTCEEEEEC-SH
T ss_pred HhCCCeeecCCcCCHHH-HHHHHHHHHHHHCCChh-----HH---H-HHHHHHHHHHHHHHHHhc---CCCEEEEEC-Cc
Confidence 34678765444444332 23466666677777652 11 1 122344445444555444 458888774 32
Q ss_pred ccccchhHHhhccCh--------------HHHHHHHHHhc----------CCChHHHHh----hccccCCCCCCcccchh
Q 003188 95 LQGRTLTNAIGSLDI--------------QNAYADALNNL----------GHVLEEIAE----QEKDAALGNGGLGRLAS 146 (840)
Q Consensus 95 l~Gr~L~nnl~NLg~--------------~~~~~eaL~~l----------g~~~~~l~~----~E~d~~LgnGGLGrLAa 146 (840)
..-..|..-|..||+ .+.+++.|+++ |-|+.++++ ..+|.-+|++---.+|-
T Consensus 374 ~~~~~la~fL~elGm~vv~v~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~~~D~~~l~~~i~~~~pDLlig~s~~k~~a~ 453 (523)
T 3u7q_B 374 DFVMGLVKFLLELGCEPVHILCHNGNKRWKKAVDAILAASPYGKNATVYIGKDLWHLRSLVFTDKPDFMIGNSYGKFIQR 453 (523)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEETTCCHHHHHHHHHHHHTSGGGTTCEEEESCCHHHHHHHHHHTCCSEEEECTTHHHHHH
T ss_pred hHHHHHHHHHHHcCCEEEEEEeCCCCHHHHHHHHHHHhhccCCCCcEEEECCCHHHHHHHHHhcCCCEEEECccHHHHHH
Confidence 222334445556664 24466777752 447777765 47999999875555776
Q ss_pred hhHhhhhccCCCeEEEe
Q 003188 147 CFLDSMATLNLPAWGYG 163 (840)
Q Consensus 147 c~ldS~a~l~~p~~G~G 163 (840)
..+-++..||+|++-+|
T Consensus 454 ~~~~~~~~~giP~irig 470 (523)
T 3u7q_B 454 DTLHKGKEFEVPLIRIG 470 (523)
T ss_dssp HHHHHCGGGCCCEEECS
T ss_pred HhhcccccCCCceEEec
Confidence 66688899999998776
No 38
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=22.67 E-value=6.6e+02 Score=26.08 Aligned_cols=43 Identities=19% Similarity=0.115 Sum_probs=30.7
Q ss_pred eEEEEcCCCHHHHhhhccCccccccCCCCCccCCC-cchhHHhhcCceEeeecC
Q 003188 647 KVVFVPNYNVSVAELLIPGSELSQHISTAGMEASG-TSNMKFSLNGCLIIGTLD 699 (840)
Q Consensus 647 kVvFl~nYnvslA~~ii~gaDv~l~iS~a~~EAsG-Ts~MKam~NGal~i~tlD 699 (840)
+|.|+.-- .+. .+++.||++... || ++-+-+|..|.+.|.+--
T Consensus 293 ~v~~~~~~--~~~-~~l~~ad~~v~~-------~g~~t~~Ea~a~G~P~v~~p~ 336 (412)
T 3otg_A 293 NVRLESWV--PQA-ALLPHVDLVVHH-------GGSGTTLGALGAGVPQLSFPW 336 (412)
T ss_dssp TEEEESCC--CHH-HHGGGCSEEEES-------CCHHHHHHHHHHTCCEEECCC
T ss_pred cEEEeCCC--CHH-HHHhcCcEEEEC-------CchHHHHHHHHhCCCEEecCC
Confidence 56666444 333 577889998743 34 678899999999997643
No 39
>2c4m_A Glycogen phosphorylase; allosteric control, phosphate dependence, starch degrading, transferase, glycosyltransferase; HET: PLP; 1.9A {Corynebacterium callunae}
Probab=20.10 E-value=21 Score=43.14 Aligned_cols=33 Identities=6% Similarity=0.115 Sum_probs=23.4
Q ss_pred HHHHHhcCHHHHHHHHHHHhccCCCCChHHHHHHHH
Q 003188 793 RVDQAYKDQKKWLKMSILSTAGSGKFSSDRTIAQYA 828 (840)
Q Consensus 793 ~~~~~Y~d~~~W~~~~~~n~a~~g~FSsDrti~eYa 828 (840)
++...|.+...|.+++...| +|+|||+.+ .+|.
T Consensus 681 ~a~~~y~~~~~~~~vvd~~~--~g~fs~~~~-~~y~ 713 (796)
T 2c4m_A 681 KPYELYETVPGLKRALDALD--NGTLNDNNS-GLFY 713 (796)
T ss_dssp CHHHHHHHSTTHHHHHHTTT--SSSSCCTTC-CHHH
T ss_pred ChHHHhhcCHHHHHHHHHHH--cCCCCCCCH-HHHH
Confidence 67777754447988877766 479999887 5553
Done!