Query 003188
Match_columns 840
No_of_seqs 262 out of 1461
Neff 5.5
Searched_HMMs 13730
Date Mon Mar 25 16:28:55 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/003188.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/003188hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1ygpa_ c.87.1.4 (A:) Glycogen 100.0 2E-233 2E-237 2047.5 60.8 810 21-838 30-876 (876)
2 d2gj4a1 c.87.1.4 (A:12-835) Gl 100.0 2E-229 1E-233 2007.4 70.6 808 17-839 1-821 (824)
3 d1l5wa_ c.87.1.4 (A:) Maltodex 100.0 7E-220 5E-224 1924.8 62.7 785 26-835 4-795 (796)
4 d1rzua_ c.87.1.8 (A:) Glycogen 100.0 6.8E-29 4.9E-33 276.6 16.7 357 300-829 108-470 (477)
5 d2bisa1 c.87.1.8 (A:1-437) Gly 99.7 1.9E-14 1.4E-18 153.9 30.3 256 331-717 119-375 (437)
6 d2bfwa1 c.87.1.8 (A:218-413) G 98.9 2.8E-09 2E-13 103.8 12.9 141 542-717 17-158 (196)
7 d2iw1a1 c.87.1.8 (A:2-371) Lip 98.5 8.6E-07 6.3E-11 90.1 17.8 124 554-708 187-310 (370)
8 d1uqta_ c.87.1.6 (A:) Trehalos 98.5 4.8E-06 3.5E-10 91.7 22.4 119 563-692 253-375 (456)
9 d2f9fa1 c.87.1.8 (A:2-167) Fir 98.0 8.1E-06 5.9E-10 76.7 9.2 126 562-718 10-135 (166)
10 d1m1nb_ c.92.2.3 (B:) Nitrogen 42.0 36 0.0026 36.3 9.6 145 14-172 306-480 (522)
11 d1qh8b_ c.92.2.3 (B:) Nitrogen 33.8 46 0.0034 35.4 8.8 142 15-170 304-475 (519)
No 1
>d1ygpa_ c.87.1.4 (A:) Glycogen phosphorylase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=100.00 E-value=2.2e-233 Score=2047.53 Aligned_cols=810 Identities=47% Similarity=0.821 Sum_probs=768.2
Q ss_pred ccCCCCCCHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCceEEEEEehhccccch
Q 003188 21 AANPLANEPSAIASNISYHVQYSPHFSPTKFEPEQAFFATAESVRDRLIQQWNETYHHFNKVDPKQTYYLSMEFLQGRTL 100 (840)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~at~~~~y~ala~~vrd~l~~~w~~t~~~~~~~~~k~vyYlSmEfl~Gr~L 100 (840)
.+.++..++++|+++|.+||++++||++++||+.++|+|||++|||+++++|.+|+++|.+.+.|+||||||||||||+|
T Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~vrd~~~~~w~~t~~~~~~~~~k~vyYlS~EfL~Gr~l 109 (876)
T d1ygpa_ 30 HQVKKFNKAEDFQDRFIDHVETTLARSLYNCDDMVAYEAASMSIRDNLVIDWNKTQQKFTTRDPKRVYYLSLEFLMGRAL 109 (876)
T ss_dssp TCCCCCCSHHHHHHHHHHHHHTTSCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECSCCCCBCHH
T ss_pred hccccCCCHHHHHHHHHHHHHeecccChhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEEeehhhccHhH
Confidence 45566778999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHhhccChHH-------------HHHHHHHhcCCChHHHHhhccccCCCCCCcccchhhhHhhhhccCCCeEEEeeccC
Q 003188 101 TNAIGSLDIQN-------------AYADALNNLGHVLEEIAEQEKDAALGNGGLGRLASCFLDSMATLNLPAWGYGLRYR 167 (840)
Q Consensus 101 ~nnl~NLg~~~-------------~~~eaL~~lg~~~~~l~~~E~d~~LgnGGLGrLAac~ldS~a~l~~p~~G~GlrY~ 167 (840)
.|||+||||+| ++++||++||+|+++|+++|+||||||||||||||||||||||||+|++||||||+
T Consensus 110 ~n~l~nlgl~d~~~~~~~~~~~~e~~~~~l~~lg~~~~~i~~~E~da~LGnGGLGrLAg~~LdS~AdL~lP~vG~GL~Y~ 189 (876)
T d1ygpa_ 110 DNALINMKIEDPEDPAASKGKPREMIKGALDELGFKLEDVLDQEPDAGLGNGGLGRLAACFVDSMATEGIPAWGYGLRYE 189 (876)
T ss_dssp HHHHHSCCC------------CHHHHHHHHHHHTCCHHHHHTTCCCBCSCCSHHHHHHHHHHHHHHHTTCCEEEEEECCS
T ss_pred HHHHHhcCCccccchhhcccchHHHHHHHHHHcCCCHHHHHhcCcCcCCCCchHHHHHHHHHHHHHhCCCCeEEEEcccC
Confidence 99999999987 59999999999999999999999999999999999999999999999999999999
Q ss_pred CccceEEeeCCceeeccccccccCCCcccccCCeeEEEEECCeEEEcCCC--c---eeeeCCeEEEEEEeeeccCCCCCC
Q 003188 168 YGLFKQKITKQGQEEVAEDWLEKFSPWEVVRHDVVFPVRFFGSVMVNPNG--T---RKWVGGEVVQAVAYDIPIPGYKTK 242 (840)
Q Consensus 168 ~G~F~Q~i~dG~Q~E~pd~Wl~~~~pwe~~r~~~~~~V~f~g~~~~~~~g--~---~~w~~~~~v~av~yd~pi~gy~~~ 242 (840)
||||+|+|+||||+|.||+|+..|+|||++|++..++|+|+|+|+...+| . .+|++++.|.|+|||+||+||++.
T Consensus 190 ~GyF~Q~I~dG~Q~E~pd~wl~~g~pwe~~r~~~~~~V~f~g~v~~~~~~~~~~~~~v~~~~~~V~a~~yd~pi~g~~~~ 269 (876)
T d1ygpa_ 190 YGIFAQKIIDGYQVETPDYWLNSGNPWEIERNEVQIPVTFYGYVDRPEGGKTTLSASQWIGGERVLAVAYDFPVPGFKTS 269 (876)
T ss_dssp SCSCEEEEETTEEEEECCCTTTTCCTTCEEEEEEEEEEEESCEEECC----CTTSCCEEECSEEEEEEEEEEEEECSSCC
T ss_pred CCCeEEEEECCEEEecCCCccCCCCcceEecCCceeEEecCcEEeeeeCCCCeEEEEEEeCCcEEEEEEEeecccccccc
Confidence 99999999999999999999999999999999999999999999854332 2 349999999999999999999999
Q ss_pred ceEEEEEEEEEcCCCCccccccCcchhhhhHhhhhhhccccccccCCCCchhhhhhhhhhhhHHHHhHHHHHHHHHHHcc
Q 003188 243 NTISLRLWDAKASAEDFNLFQFNDGQYESAAQLHSRAQQICAVLYPGDSTEEGKLLRLKQQFFLCSASLQDMILRFKERK 322 (840)
Q Consensus 243 ~~~~lrLw~a~v~~~~~~l~~~~~~~y~~a~~~~~~~~~It~~LYp~D~~~~Gk~lRL~Qeyfl~~a~lqdiir~~~~~~ 322 (840)
+||+||||+++ +...||++.|++++|.++++++..+|+||++|||+|++++||+||||||||||+||+|+|+|+|++.+
T Consensus 270 ~Vn~lRLw~a~-~~~~~d~~~f~~gdy~~a~~~~~~~~~IT~~LYp~D~~~~GkelRLkQEyflg~ggv~~l~~~~~~~~ 348 (876)
T d1ygpa_ 270 NVNNLRLWQAR-PTTEFDLNKFNNGDYKNSVAQQQRAESITAVLYPNDNFAQGKELRLKQQYFWCAASLHDILRRFKKSK 348 (876)
T ss_dssp CEEEEEEEEEE-ESCSCCHHHHHTTCHHHHTHHHHHHHHHHHSSSCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred ceeeEEeeecc-cCcccccCccccCchhhhhhhhHHhhhhheeccCCCCcchHHHHHHHHHHHhhhhHHHHHHHHHHhcC
Confidence 99999999999 88889999999999999999999999999999999999999999999999999999999999999988
Q ss_pred cCcccccCCCceEEEeCCCcccccHHHHHHHHHhhcCCChhHHhhhcCccEEEeecCChhhhHhhccHHHHHhhchhHHH
Q 003188 323 SGRQWSEFPSKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEALEKWSQAVMWKLLPRHME 402 (840)
Q Consensus 323 g~~~l~~l~~~~viHlNDtHpalaipElmR~l~d~~~l~~~~A~~i~~~~~vfT~HT~~~eglE~w~~~l~~~lLPr~~~ 402 (840)
.+++.|++|++||||||||||++|||||+|+|++|++|++||++|+++|+||||||+|||+|+||++||+++||||++
T Consensus 349 --~~~~~~~~~~~ihlNegHpa~ai~ElmR~l~d~~gl~~~eA~eivr~~~~fTtHTpvpaglE~wp~~l~~~~lpr~~~ 426 (876)
T d1ygpa_ 349 --RPWTEFPDQVAIQLNDTHPTLAIVELQRVLVDLEKLDWHEAWDIVTKTFAYTNHTVMQEALEKWPRRLFGHLLPRHLE 426 (876)
T ss_dssp --CCGGGHHHHEEEEEESSTTTHHHHHHHHHHHHTTCCCHHHHHHHHHHHEEEEECCCSGGGSCEEEHHHHHHHCHHHHH
T ss_pred --CChhhcccceEEEecCCccHhHHHHHHHHHHHhcCCCHHHHHHHhhceEEEEcCCCchHHhccCCHHHHHHhhhhhhh
Confidence 479999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCCcccccccccccCCCCCCcccccccccccCCcccchhhhhHHHHHhhhhcCccccC-CCCC
Q 003188 403 IIEEIDKRFIAMVRSTRSDLESKIPSMCILDNNPKKPVVRMANLCVVSAHTVNGVAQLHSDILKADLFADYVSLW-PNKL 481 (840)
Q Consensus 403 ii~~in~~f~~~~~~~~~~~~~~~~~~~iie~~~~~~~v~Ma~lai~~S~~VNgVS~lH~eilk~~~f~~~~~l~-p~k~ 481 (840)
||++||++|+..+.+++|.|.+.+.+|++|++..+.++||||+|||++||+|||||+||++++++++|++|++++ |.+|
T Consensus 427 ii~~In~~fl~~~~~~~~~d~~~l~~l~~i~~~~~~~~~~Ma~LAl~~S~~vNGVS~LH~ev~r~~~~~~f~~~~~p~k~ 506 (876)
T d1ygpa_ 427 IIYDINWFFLEDVAKKFPKDVDLLSRISIIEENSPERQIRMAFLAIVGSHKVNGVVELHSELIKTTIFKDFIKFYGPSKF 506 (876)
T ss_dssp HHHHHHHHHHHHHHHHSTTCTHHHHHHCSEECCSSSCEEEHHHHHHHHEEEEEESSHHHHHHHHHTTTHHHHHHHCGGGE
T ss_pred hHhhhhHHHHHHHHHHCCCCHHHHHhhhcccccCCcceeeHHHHHHHHhchhhhHHHHHHHHHHHhhhhhcccccCCccc
Confidence 999999999999999999999999999999861112389999999999999999999999999999999999998 9999
Q ss_pred cccccccCcccccccCChhhhHHHHhhcCc--cccccChhhHhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHh---
Q 003188 482 QNKTNGITPRRWLRFCNPELSKIITKWLKT--DQWVTNLDLLVGLRQFADNTELQAEWESAKMASKKHLADYIWRVT--- 556 (840)
Q Consensus 482 ~~iTNGI~~rrWl~~~NP~l~~li~~~~g~--~~w~~~~~~l~~l~~~~~d~~~~~~~~~~K~~nK~~L~~~i~~~~--- 556 (840)
.|||||||+|||+.+|||+|+++|++++|+ ++|.+|++.|++|+++++|++|+++|.++|+.||++|+++|++++
T Consensus 507 ~niTNGVh~rrWl~~~np~L~~l~~~~ig~~~~~w~~d~~~l~~l~~~~dd~~~~~~~~~~k~~nK~rL~~~i~~~~~~~ 586 (876)
T d1ygpa_ 507 VNVTNGITPRRWLKQANPSLAKLISETLNDPTEEYLLDMAKLTQLEKYVEDKEFLKKWNQVKLNNKIRLVDLIKKENDGV 586 (876)
T ss_dssp EECCCCBCHHHHTTTTCHHHHHHHHHHTTCTTCGGGTCGGGGGGGGGGGGCTHHHHHHHHHHHHHHHHHHHHHHHTTTTC
T ss_pred cccccCcccchHHhhcCHHHHHHHHHhcCccchhhccCHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 999999999999999999999999999994 369999999999999999999999999999999999999999875
Q ss_pred ---CCCCCCCCceEeecccchhhhhhhhhhhHHHHHHHHHhhc--Cccc----cCCCCCeEEEEEecCCcCCHHHHHHHH
Q 003188 557 ---GVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEM--SPQE----RKKTTPRTIMIGGKAFATYTNAKRIVK 627 (840)
Q Consensus 557 ---G~~~dp~~l~d~~vkR~heYKRq~Lnll~ii~~y~~ik~~--~p~~----~~~~~p~~~If~GKA~P~y~~aK~iIk 627 (840)
|..++|+++||+||||||+||||+||+|+++.||.++|++ +++. ..+.+|+||||||||||+|.+||+|||
T Consensus 587 ~~~g~~~~p~~lfdvq~kR~heYKRq~Ln~l~i~~ry~~lK~~~~~~~~l~~~~~~~~p~~~IFAGKAhP~d~~aK~iIk 666 (876)
T d1ygpa_ 587 DIINREYLDDTLFDMQVKRIHEYKRQQLNVFGIIYRYLAMKNMLKNGASIEEVARKYPRKVSIFGGKSAPGYYMAKLIIK 666 (876)
T ss_dssp CCSCSTTGGGCEEEEEESCCCGGGTHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHSCCEEEEEECCCCTTCHHHHHHHH
T ss_pred ccccceecccccCHHHHHHHHHhcccchhhHHHHHHHHHHHhcccCccchhhccccCCCeEEEEcCCCCCccHHHHHHHH
Confidence 7889999999999999999999999999999999998742 1100 013569999999999999999999999
Q ss_pred HHHHHHhhhcCCcCCCCcceEEEEcCCCHHHHhhhccCccccccCCCCCccCCCcchhHHhhcCceEeeecCchhHHHHH
Q 003188 628 LVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQ 707 (840)
Q Consensus 628 ~I~~la~~in~d~~~~~~lkVvFl~nYnvslA~~ii~gaDv~l~iS~a~~EAsGTs~MKam~NGal~i~tlDGanvEi~~ 707 (840)
+|+++|++||+||++++++||||+|||||++|++|+|||||||||||||+||||||||||||||+|||||||||||||++
T Consensus 667 ~I~~va~iin~d~~~~~~lKVVFlenY~vslAe~lvpg~DVwlnip~ap~EASGTSgMK~alNGaL~lstlDGwnvEi~e 746 (876)
T d1ygpa_ 667 LINCVADIVNNDESIEHLLKVVFVADYNVSKAEIIIPASDLSEHISTAGTEASGTSNMKFVMNGGLIIGTVDGANVEITR 746 (876)
T ss_dssp HHHHHHHHHTTCGGGTTSEEEEEETTCCHHHHHHHGGGCSEEEECCCTTCCSCCHHHHHHHTTTCEEEEESCTHHHHHHH
T ss_pred HHHHHHHHHhcCcccccceeEEEecCCchHHHHHhcchhhhhhhCCCCCcccCCchHhHHHHcCCeeeccccchHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcCcceEeecCccccchhhhhhccCCCCCCChhHHHHHHHHhcCCCCCCC---hHHHHHHHhhCCCCCCCccccccCCh
Q 003188 708 EIGEENFFLFGAVAEQVPKLRKEREDGLFKPDPRFEEAKQFIRSGAFGSYD---YNPLLDSLEGNTGYGRGDYFLVGYDF 784 (840)
Q Consensus 708 ~vG~~N~~~fG~~~d~V~~~~~~~~y~~~~~~~~l~~v~~~~~~G~f~~~~---~~~l~~~L~~~~~~~~~D~~~~~~Df 784 (840)
+||++|+|+||+++++|.+++.++.|+|.+..+.|++|+|++.+|.|++.+ |++||+.|+.+ +|+|||++||
T Consensus 747 ~vg~eN~f~fG~~~~ev~~~~~~~~y~~~~~~~~L~~vld~i~~g~f~~~d~~~f~~l~~~L~~~-----~D~y~~~~Df 821 (876)
T d1ygpa_ 747 EIGEDNVFLFGNLSENVEELRYNHQYHPQDLPSSLDSVLSYIESGQFSPENPNEFKPLVDSIKYH-----GDYYLVSDDF 821 (876)
T ss_dssp HHCGGGSEEESCCHHHHHHHHHHHHHSCCCCCHHHHHHHHHTC--CCCTTSTTTTHHHHHHHHHS-----TTTTCHHHHH
T ss_pred hcCccceEEecCcHHHHHHhhhccCCChhhhhHHHHHHHHHHhcCCCCCCChHHHHHHHHHHHhC-----CChhhhhccH
Confidence 999999999999999999999988999988889999999999999997665 99999999987 9999999999
Q ss_pred HHHHHHHHHHHHHhcC-HHHHHHHHHHHhccCCCCChHHHHHHHHHHHhcccccc
Q 003188 785 PSYLEAQDRVDQAYKD-QKKWLKMSILSTAGSGKFSSDRTIAQYAKEIWNITECR 838 (840)
Q Consensus 785 ~~y~~~~~~~~~~Y~d-~~~W~~~~~~n~a~~g~FSsDrti~eYa~~iw~~~~~~ 838 (840)
+||+++|++|..+|.| +++|.+||+.|||.+|+|||||||+|||++||+++|+.
T Consensus 822 ~~Y~~~q~~V~~~Y~d~~~~W~~~~~~nia~~g~FSSdR~I~eYa~~IW~~~p~~ 876 (876)
T d1ygpa_ 822 ESYLATHELVDQEFHNQRSEWLKKSVLSLANVGFFSSDRCIEEYSDTIWNVEPVT 876 (876)
T ss_dssp HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHGGGBHHHHHHHHHHHTTCCCCC-
T ss_pred HHHHHHHHHHHHHHcCChHHHHHHHHHHHhcCCCcChHHHHHHHHHhccCCccCC
Confidence 9999999999999987 57999999999999999999999999999999999973
No 2
>d2gj4a1 c.87.1.4 (A:12-835) Glycogen phosphorylase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}
Probab=100.00 E-value=1.6e-229 Score=2007.39 Aligned_cols=808 Identities=47% Similarity=0.812 Sum_probs=766.7
Q ss_pred ccccccCCCCCCHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCceEEEEEehhcc
Q 003188 17 KIPAAANPLANEPSAIASNISYHVQYSPHFSPTKFEPEQAFFATAESVRDRLIQQWNETYHHFNKVDPKQTYYLSMEFLQ 96 (840)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~at~~~~y~ala~~vrd~l~~~w~~t~~~~~~~~~k~vyYlSmEfl~ 96 (840)
|||+.......++++|+++|.+||++++||++++||+.++|.|||++|||+++++|.+|++++.+.+.|+||||||||||
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~a~~~~~y~al~~~vrd~l~~~w~~t~~~~~~~~~k~vyYlS~Efl~ 80 (824)
T d2gj4a1 1 QISVRGLAGVENVTELKKNFNRHLHFTLVKDRNVATPRDYYFALAHTVRDHLVGRWIRTQQHYYEKDPKRIYYLSLEFYM 80 (824)
T ss_dssp CCGGGCCCCHHHHHHHHHHHHHHHHHTTCCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECSCEEE
T ss_pred CccccccCCCCCHHHHHHHHHHHHHHhhCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcEEEEEchhhhc
Confidence 46666666667889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccchhHHhhccChHHHHHHHHHhcCCChHHHHhhccccCCCCCCcccchhhhHhhhhccCCCeEEEeeccCCccceEEee
Q 003188 97 GRTLTNAIGSLDIQNAYADALNNLGHVLEEIAEQEKDAALGNGGLGRLASCFLDSMATLNLPAWGYGLRYRYGLFKQKIT 176 (840)
Q Consensus 97 Gr~L~nnl~NLg~~~~~~eaL~~lg~~~~~l~~~E~d~~LgnGGLGrLAac~ldS~a~l~~p~~G~GlrY~~G~F~Q~i~ 176 (840)
||+|.|||+|||+++++++||+++|+++++|+++|+||||||||||||||||||||||||+|++||||||+||||+|+|+
T Consensus 81 Gr~L~nnl~nlg~~~~~~~al~~~g~~l~~i~~~E~da~LGnGGLGrLAgd~LkSaAdLglP~~G~GL~Y~~GyF~Q~I~ 160 (824)
T d2gj4a1 81 GRTLQNTMVNLALENACDEATYQLGLDMEELEEIEEDAGLGNGGLGRLAACFLDSMATLGLAAYGYGIRYEFGIFNQKIC 160 (824)
T ss_dssp ECCHHHHHHHHTCHHHHHHHHHHTTCCHHHHHTTSCCEEECCSHHHHHHHHHHHHHHHTTCCEEEEEECCSBCSCEEEEE
T ss_pred chhHHHHHHhCCCHHHHHHHHHHcCCCHHHHHhcCCCCCCCCccHHHHHHHHHHHHHhCCCCeEEEEcCcCCCCeEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCceeeccccccccCCCcccccCCeeEEEEECCeEEEcCCCceeeeCCeEEEEEEeeeccCCCCCCceEEEEEEEEEcCC
Q 003188 177 KQGQEEVAEDWLEKFSPWEVVRHDVVFPVRFFGSVMVNPNGTRKWVGGEVVQAVAYDIPIPGYKTKNTISLRLWDAKASA 256 (840)
Q Consensus 177 dG~Q~E~pd~Wl~~~~pwe~~r~~~~~~V~f~g~~~~~~~g~~~w~~~~~v~av~yd~pi~gy~~~~~~~lrLw~a~v~~ 256 (840)
||||+|.||+|+..++|||++|++.+++|+|+|+++...++ .+|++++.|.|+|||+|||||++++||+||||+++ +.
T Consensus 161 dG~Q~E~~d~w~~~~~Pwe~~r~~~~~~v~f~g~v~~~~~~-~~w~~~~~V~avpydv~i~g~~~~~vn~lRlW~a~-~~ 238 (824)
T d2gj4a1 161 GGWQMEEADDWLRYGNPWEKARPEFTLPVHFYGRVEHTSQG-AKWVDTQVVLAMPYDTPVPGYRNNVVNTMRLWSAK-AP 238 (824)
T ss_dssp TTEEEEECCCTTTTCCTTCEECGGGCEEEEESCEEEECSSS-EEEESCEEEEEEEEEEEEECSSSSCEEEEEEEEEE-CC
T ss_pred CCeEEEcCCccccCCCCceeecccceeEEecCceeeecCcc-ccccCceEEEEEeeeeEEeeccCceeEEEEEEeec-cC
Confidence 99999999999999999999999999999999999865444 46999999999999999999999999999999999 77
Q ss_pred CCccccccCcchhhhhHhhhhhhccccccccCCCCchhhhhhhhhhhhHHHHhHHHHHHHHHHHcccC------cccccC
Q 003188 257 EDFNLFQFNDGQYESAAQLHSRAQQICAVLYPGDSTEEGKLLRLKQQFFLCSASLQDMILRFKERKSG------RQWSEF 330 (840)
Q Consensus 257 ~~~~l~~~~~~~y~~a~~~~~~~~~It~~LYp~D~~~~Gk~lRL~Qeyfl~~a~lqdiir~~~~~~g~------~~l~~l 330 (840)
..|++..|+.|+|..++.+++.+|+|+++|||+|+.+.||++||+|||||++||+|+|+|+|++.+.. .+++.|
T Consensus 239 ~~f~~~~~~~G~~~~~lld~~~~eni~~~ly~~d~ly~G~~lRl~Qqy~l~~~g~~~ilr~~~~~~~~~~~~~~~~~~~~ 318 (824)
T d2gj4a1 239 NDFNLKDFNVGGYIQAVLDRNLAENISRVLYPNDNFFEGKELRLKQEYFVVAATLQDIIRRFKSSKFGCRDPVRTNFDAF 318 (824)
T ss_dssp C----------CHHHHHHTHHHHHGGGSBCCCCSSCCCCCHHHHHHHHHHHHHHHHHHHHHHHC-----------CGGGH
T ss_pred ccccccccccCcHHHHHHhhcchhcchhccCCcccccCchHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccchhhc
Confidence 88999999999999999999999999999999999999999999999999999999999999976521 257888
Q ss_pred CCceEEEeCCCcccccHHHHHHHHHhhcCCChhHHhhhcCccEEEeecCChhhhHhhccHHHHHhhchhHHHHHHHHHHH
Q 003188 331 PSKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEALEKWSQAVMWKLLPRHMEIIEEIDKR 410 (840)
Q Consensus 331 ~~~~viHlNDtHpalaipElmR~l~d~~~l~~~~A~~i~~~~~vfT~HT~~~eglE~w~~~l~~~lLPr~~~ii~~in~~ 410 (840)
|++++||||||||||++|||||+|+|++|++|++||++|+++|+||||||+|||+|+||++||+++||||++||++||++
T Consensus 319 ~~~~vihlNegHpa~ai~ElmR~l~d~~gl~~d~A~e~v~~~~~fTtHTpvpag~E~f~~~l~~~~lpr~~~ii~ei~~~ 398 (824)
T d2gj4a1 319 PDKVAIQLNDTHPSLAIPELMRVLVDLERLDWDKAWEVTVKTCAYTNHTVLPEALERWPVHLLETLLPRHLQIIYEINQR 398 (824)
T ss_dssp HHHEEEEEESSTTTTHHHHHHHHHHHTSCCCHHHHHHHHHHHEEEECCCCCGGGSCEEEHHHHHHHCHHHHHHHHHHHHH
T ss_pred cccceeeccCCccHhHHHHHHHHHHHhcCCCHHHHHHHhhceEEEEeccCchHhcCccCHHHHHHHhHHHhhhhhhhHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCcccccccccccCCCCCC-cccccccccccCCcccchhhhhHHHHHhhhhcCccccCCCCCcccccccC
Q 003188 411 FIAMVRSTRSDLESKIPSMCILDNNPKKP-VVRMANLCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGIT 489 (840)
Q Consensus 411 f~~~~~~~~~~~~~~~~~~~iie~~~~~~-~v~Ma~lai~~S~~VNgVS~lH~eilk~~~f~~~~~l~p~k~~~iTNGI~ 489 (840)
|+..+++.+|.|.+++.+|+++++ +.+ +||||+||+++||+|||||+||+++++++.|++|+.++|.+|.+||||||
T Consensus 399 fl~~~~~~~~~d~~~~~~l~ii~e--~~~~~~~Ma~Lal~~S~~vNGVSklH~ev~~~~~~~~~~~~~p~ki~~iTNGV~ 476 (824)
T d2gj4a1 399 FLNRVAAAFPGDVDRLRRMSLVEE--GAVKRINMAHLCIAGSHAVNGVARIHSEILKKTIFKDFYELEPHKFQNKTNGIT 476 (824)
T ss_dssp HHHHHHHHSTTCHHHHHHHCSEEC--SSSCEEEHHHHHHHTCSCEEESSHHHHHHHHHTTTHHHHHHCGGGEEECCCCBC
T ss_pred HHHHHHHHCCCcHHHHhhcccccc--cCCceeeHHHHHHHhchhHHHHHHHHHHHHHHhhccccccCCCcceecccCccc
Confidence 999999999999999999999987 333 89999999999999999999999999999999999999999999999999
Q ss_pred cccccccCChhhhHHHHhhcCccccccChhhHhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCceEee
Q 003188 490 PRRWLRFCNPELSKIITKWLKTDQWVTNLDLLVGLRQFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQ 569 (840)
Q Consensus 490 ~rrWl~~~NP~l~~li~~~~g~~~w~~~~~~l~~l~~~~~d~~~~~~~~~~K~~nK~~L~~~i~~~~G~~~dp~~l~d~~ 569 (840)
+|||+..|||+|++++++++| ++|.+|++.|+++.++++|+.|+++|.++|+.||.+|+++|++++|+.+||+++||+|
T Consensus 477 ~rrWl~~~np~L~~l~~~~ig-~~w~~d~~~l~~l~~~~~d~~~~~~~~~~k~~~K~~L~~~i~~~~g~~ldp~~lfd~~ 555 (824)
T d2gj4a1 477 PRRWLVLCNPGLAEIIAERIG-EEYISDLDQLRKLLSYVDDEAFIRDVAKVKQENKLKFAAYLEREYKVHINPNSLFDVQ 555 (824)
T ss_dssp TCCCCCCTCHHHHHHHHHHHC-SGGGGCGGGGGGGGGGTTCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCTTSEEEEE
T ss_pred CccchhccCHHHHHHHHhhhc-cccccCHHHHHHHHHhCCCHHHHHHHHHHHHHhHHHHHHHHHHHhCCCCCcchhhhhh
Confidence 999999999999999999999 5999999999999999999999999999999999999999999999999999999999
Q ss_pred cccchhhhhhhhhhhHHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcCCCCcceEE
Q 003188 570 VKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYLKVV 649 (840)
Q Consensus 570 vkR~heYKRq~Lnll~ii~~y~~ik~~~p~~~~~~~p~~~If~GKA~P~y~~aK~iIk~I~~la~~in~d~~~~~~lkVv 649 (840)
||||||||||+||+++++++|.+||. +|+. +.+|+||||||||||+|.+||+|||+|+++|++||+||++++++|||
T Consensus 556 arRfheYKRq~Ln~~~i~~ly~rlk~-~~~~--~~~P~q~IFaGKAhP~d~~gK~iIk~I~~va~~in~dp~~~~~lkVv 632 (824)
T d2gj4a1 556 VKRIHEYKRQLLNCLHVITLYNRIKK-EPNK--FVVPRTVMIGGKAAPGYHMAKMIIKLITAIGDVVNHDPVVGDRLRVI 632 (824)
T ss_dssp ESCCCGGGTHHHHHHHHHHHHHHHHH-CTTS--CCCCEEEEEECCCCTTCHHHHHHHHHHHHHHHHHTTCTTTGGGEEEE
T ss_pred eeechhhhhhhhhHhhHHHHHHHhhh-cccC--CCCCeEEEEeCCCCCccHHHHHHHHHHHHHHHHHhcChhhccceeEE
Confidence 99999999999999999999999998 6653 57899999999999999999999999999999999999999999999
Q ss_pred EEcCCCHHHHhhhccCccccccCCCCCccCCCcchhHHhhcCceEeeecCchhHHHHHHhcCcceEeecCccccchhhhh
Q 003188 650 FVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAVAEQVPKLRK 729 (840)
Q Consensus 650 Fl~nYnvslA~~ii~gaDv~l~iS~a~~EAsGTs~MKam~NGal~i~tlDGanvEi~~~vG~~N~~~fG~~~d~V~~~~~ 729 (840)
|+|||||++|++|+|||||||||||||+||||||||||||||+|||||||||||||++++|++|+|+||+++++|.++++
T Consensus 633 FlenY~v~lA~~li~g~Dvwln~p~~~~EASGTSgMK~alNGal~lstlDGwnvEi~~~vg~~N~~~fG~~~~ev~~~~~ 712 (824)
T d2gj4a1 633 FLENYRVSLAEKVIPAADLSEQISTAGTEASGTGNMKFMLNGALTIGTMDGANVEMAEEAGEENFFIFGMRVEDVDRLDQ 712 (824)
T ss_dssp EETTCCHHHHHHHGGGCSEEEECCCTTSCSCCSHHHHHHHTTCEEEECSCTTHHHHHHHHCGGGSEECSCCHHHHHHHHH
T ss_pred EcCCCchHHHHHhhhhhhhhhcCCCCCcccCCcchhHHHHcCCeeeccccchHHHHHHhcCcccEEEeCCChhhhhHHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998875
Q ss_pred hccCCC---CCCChhHHHHHHHHhcCCCCCCC---hHHHHHHHhhCCCCCCCccccccCChHHHHHHHHHHHHHhcCHHH
Q 003188 730 EREDGL---FKPDPRFEEAKQFIRSGAFGSYD---YNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYKDQKK 803 (840)
Q Consensus 730 ~~~y~~---~~~~~~l~~v~~~~~~G~f~~~~---~~~l~~~L~~~~~~~~~D~~~~~~Df~~y~~~~~~~~~~Y~d~~~ 803 (840)
.+ |+| |+.+|++++|+|.+.+|+|++.+ |.+|++.|.+ +|+|+|++||+||++||++|..+|.||++
T Consensus 713 ~~-y~~~~~y~~~~~l~~v~d~i~~~~~~~~~~~~f~~l~~~l~~------~D~y~v~~Df~~y~~~q~~v~~~Y~d~~~ 785 (824)
T d2gj4a1 713 RG-YNAQEYYDRIPELRQIIEQLSSGFFSPKQPDLFKDIVNMLMH------HDRFKVFADYEEYVKCQERVSALYKNPRE 785 (824)
T ss_dssp HC-CCHHHHHHHCHHHHHHHHHHHHTTTCTTSTTTTHHHHHHHHH------CCTTCTGGGHHHHHHHHHHHHHHHTCHHH
T ss_pred cC-CCHHHHHhhCHHHHHHHHHhccccCCCCCchhHHHHHHHHhc------CChhhhhccHHHHHHHHHHHHHhhcCHHH
Confidence 54 888 57799999999999999997665 9999999984 79999999999999999999999999999
Q ss_pred HHHHHHHHhccCCCCChHHHHHHHHHHHhccccccC
Q 003188 804 WLKMSILSTAGSGKFSSDRTIAQYAKEIWNITECRT 839 (840)
Q Consensus 804 W~~~~~~n~a~~g~FSsDrti~eYa~~iw~~~~~~~ 839 (840)
|.+||+.|||.+|+|||||||+|||++||+++|++.
T Consensus 786 W~~~~~~nia~~g~FssdR~i~eY~~~iw~~~P~~~ 821 (824)
T d2gj4a1 786 WTRMVIRNIATSGKFSSDRTIAQYAREIWGVEPSRQ 821 (824)
T ss_dssp HHHHHHHHHTTCGGGBHHHHHHHHHHHTTCCCCCCC
T ss_pred HHHHHHHHHhcCCCcChHHHHHHHHHHccCCccCCC
Confidence 999999999999999999999999999999999874
No 3
>d1l5wa_ c.87.1.4 (A:) Maltodextrin phosphorylase (MALP) {Escherichia coli [TaxId: 562]}
Probab=100.00 E-value=6.8e-220 Score=1924.82 Aligned_cols=785 Identities=43% Similarity=0.740 Sum_probs=757.5
Q ss_pred CCCHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCceEEEEEehhccccchhHHhh
Q 003188 26 ANEPSAIASNISYHVQYSPHFSPTKFEPEQAFFATAESVRDRLIQQWNETYHHFNKVDPKQTYYLSMEFLQGRTLTNAIG 105 (840)
Q Consensus 26 ~~~~~~~~~~~~~~l~~~~g~~~~~at~~~~y~ala~~vrd~l~~~w~~t~~~~~~~~~k~vyYlSmEfl~Gr~L~nnl~ 105 (840)
-.++++|+++|.+|+++.+++++++||+.++|.|||.+|||++.++|.+|++ .+.|+||||||||||||+|.|||+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~a~~~~vrd~l~~~w~~~~~----~~~k~v~Y~S~Efl~Gr~l~n~l~ 79 (796)
T d1l5wa_ 4 IFNDKQFQEALSRQWQRYGLNSAAEMTPRQWWLAVSEALAEMLRAQPFAKPV----ANQRHVNYISMEFLIGRLTGNNLL 79 (796)
T ss_dssp CCCHHHHHHHHHHHHHHTTCSSGGGCCHHHHHHHHHHHHHHHHHTSCCCCCC----SSCCEEEEECSCCCCCCCHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHhCCCHHHCCHHHHHHHHHHHHHHHHHHHHHhhcc----cCCceEEEEechhhcchhhHHHHH
Confidence 3589999999999999999999999999999999999999999999988753 467999999999999999999999
Q ss_pred ccChHHHHHHHHHhcCCChHHHHhhccccCCCCCCcccchhhhHhhhhccCCCeEEEeeccCCccceEEeeCCceeeccc
Q 003188 106 SLDIQNAYADALNNLGHVLEEIAEQEKDAALGNGGLGRLASCFLDSMATLNLPAWGYGLRYRYGLFKQKITKQGQEEVAE 185 (840)
Q Consensus 106 NLg~~~~~~eaL~~lg~~~~~l~~~E~d~~LgnGGLGrLAac~ldS~a~l~~p~~G~GlrY~~G~F~Q~i~dG~Q~E~pd 185 (840)
||||.+.+++||++||+|+++|+++|+||||||||||||||||||||||||+|++||||||+||||+|+|+||||+|.||
T Consensus 80 nlgi~~~~~~al~~lg~~~~~~~~~E~d~~LgnGGLG~LAgd~lkSaadLglP~vGvGLlY~~GyF~Q~i~dG~Q~E~~d 159 (796)
T d1l5wa_ 80 NLGWYQDVQDSLKAYDINLTDLLEEEIDPALGNGGLGRLAACFLDSMATVGQSATGYGLNYQYGLFRQSFVDGKQVEAPD 159 (796)
T ss_dssp HHTCHHHHHHHHHTTTCCHHHHHTTCCCCCCCCSHHHHHHHHHHHHHHHTTCCEEEEEECCSSCSCEEEEETTEEEEECC
T ss_pred hCCCHHHHHHHHHHcCCCHHHHHhcCcCCCCCCchHHHHHHHHHHHHHhCCCCEEEEEcCcCCCCeEEEEECCEEEECCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCCcccccCCeeEEEEECCeEEEcCCCceeeeCCeEEEEEEeeeccCCCCCCceEEEEEEEEEcCCCCccccccC
Q 003188 186 DWLEKFSPWEVVRHDVVFPVRFFGSVMVNPNGTRKWVGGEVVQAVAYDIPIPGYKTKNTISLRLWDAKASAEDFNLFQFN 265 (840)
Q Consensus 186 ~Wl~~~~pwe~~r~~~~~~V~f~g~~~~~~~g~~~w~~~~~v~av~yd~pi~gy~~~~~~~lrLw~a~v~~~~~~l~~~~ 265 (840)
+|+..++||+.++++.+++|+|+|++.. +|+ |+++.+|.|+|||+||+||.+++||+||||+++ +...|++..++
T Consensus 160 ~w~~~~~P~~~~~~~~~~~v~~~g~v~~--~~~--w~~~~~V~a~~~d~~v~g~~~~~v~~LrLw~a~-~~~~~~~~~~~ 234 (796)
T d1l5wa_ 160 DWHRSNYPWFRHNEALDVQVGIGGKVTK--DGR--WEPEFTITGQAWDLPVVGYRNGVAQPLRLWQAT-HAHPFDLTKFN 234 (796)
T ss_dssp CCCGGGCTTCEECGGGCEEEEESCEECT--TSC--EECSEEEEEEEEEEEEECSSSCCEEEEEEEEEE-CSSCCCHHHHH
T ss_pred CcccCCCceeeccccceEEEeeccEEee--cCc--ccCceEEEEEeeeeeeecccCCceeEEEeeecc-cCccccccccc
Confidence 9999999999999999999999999863 454 999999999999999999999999999999999 55679999999
Q ss_pred cchhhhhHhhhhhhccccccccCCCCchhhhhhhhhhhhHHHHhHHHHHHHHHHHcccCcccccCCCceEEEeCCCcccc
Q 003188 266 DGQYESAAQLHSRAQQICAVLYPGDSTEEGKLLRLKQQFFLCSASLQDMILRFKERKSGRQWSEFPSKVAVQLNDTHPTL 345 (840)
Q Consensus 266 ~~~y~~a~~~~~~~~~It~~LYp~D~~~~Gk~lRL~Qeyfl~~a~lqdiir~~~~~~g~~~l~~l~~~~viHlNDtHpal 345 (840)
.++|.+++++++.+|+||++|||+|++++||++||+||||||+||+|+|+|++++.+ ++++.+++|++||||||||||
T Consensus 235 ~~d~~~~~~n~~~~r~IT~~LY~~D~~~~gkelRl~Qe~~l~~~g~~~l~r~~~~~~--~~~~~~~~~~vihlNEgHpaf 312 (796)
T d1l5wa_ 235 DGDFLRAEQQGINAEKLTKVLYPNDNAFEGKKLRLMQQYFQCACSVADILRRHHLAG--RKLHELADYEVIQLNDTHPTI 312 (796)
T ss_dssp TTCTTGGGHHHHHHHGGGTCSSCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT--CCGGGHHHHEEEEEESSTTTT
T ss_pred cccHHHHHhchhhhhccceEeCCCCcccchHHHHHHHHHhhhhhHHHHHHHHHhhcC--CChHHccchhhhhcccchHHH
Confidence 999999999999999999999999999999999999999999999999999999887 579999999999999999999
Q ss_pred cHHHHHHHHHhhcCCChhHHhhhcCccEEEeecCChhhhHhhccHHHHHhhchhHHHHHHHHHHHHHHHHHHhcCCCccc
Q 003188 346 AIPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEALEKWSQAVMWKLLPRHMEIIEEIDKRFIAMVRSTRSDLESK 425 (840)
Q Consensus 346 aipElmR~l~d~~~l~~~~A~~i~~~~~vfT~HT~~~eglE~w~~~l~~~lLPr~~~ii~~in~~f~~~~~~~~~~~~~~ 425 (840)
++||+||+|+|++|++|++||++|+++|+||||||+|||+|+||++||+++||||++||++||++|+..+++.+|.|.++
T Consensus 313 ai~El~R~l~d~~gl~~~~A~e~vr~~~~fTtHTpvpag~e~fp~~li~~~l~~~~~~i~~i~~~fl~~~~~~~~~d~~~ 392 (796)
T d1l5wa_ 313 AIPELLRVLIDEHQMSWDDAWAITSKTFAYTNHTLMPEALERWDVKLVKGLLPRHMQIINEINTRFKTLVEKTWPGDEKV 392 (796)
T ss_dssp HHHHHHHHHHHHSCCCHHHHHHHHTTTEEEECCCCSGGGSCEEEHHHHHHHCHHHHHHHHHHHHHHHHHHHHHSTTCHHH
T ss_pred HHHHHHHHHHHhcCCCHHHHHHHhhceEEEeccCCchhhccccCHHHHHHHhHHHHHHHhHhhHHHHHHHHHHCCCcHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccccCCCCCCcccccccccccCCcccchhhhhHHHHHhhhhcCccccCCCCCcccccccCcccccccCChhhhHHH
Q 003188 426 IPSMCILDNNPKKPVVRMANLCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPRRWLRFCNPELSKII 505 (840)
Q Consensus 426 ~~~~~iie~~~~~~~v~Ma~lai~~S~~VNgVS~lH~eilk~~~f~~~~~l~p~k~~~iTNGI~~rrWl~~~NP~l~~li 505 (840)
+.+|+++++ ++||||+||+++|++|||||+||++++++++|++|+++||.+|++||||||+|||+..|||++++++
T Consensus 393 ~~~~~~~~~----~~~~Ma~LAl~~S~~vNGVSklH~ev~~~~~~~~~~~~~p~~i~~ITNGVh~~~Wl~~~n~~L~~l~ 468 (796)
T d1l5wa_ 393 WAKLAVVHD----KQVHMANLCVVGGFAVNGVAALHSDLVVKDLFPEYHQLWPNKFHNVTNGITPRRWIKQCNPALAALL 468 (796)
T ss_dssp HHHHCSEET----TEEEHHHHHHHHSSEEEESSHHHHHHHHHTTSHHHHHHCGGGEEECCCCBCHHHHTTTTCHHHHHHH
T ss_pred Hhhhchhcc----cccchHHHHHHhhhhhHHHHHHHHHHHHHHhhhhccccCCcccccccccccHHHHHhhhCHHHHHHH
Confidence 999998864 5999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcCccccccChhhHhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCceEeecccchhhhhhhhhhhH
Q 003188 506 TKWLKTDQWVTNLDLLVGLRQFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQVKRIHEYKRQLLNILG 585 (840)
Q Consensus 506 ~~~~g~~~w~~~~~~l~~l~~~~~d~~~~~~~~~~K~~nK~~L~~~i~~~~G~~~dp~~l~d~~vkR~heYKRq~Lnll~ 585 (840)
++++| +.|.++++.+..++++++|+.|++++.++|++||++|+++|++++|+.+||+++||+||||||+||||+||+++
T Consensus 469 ~~~ig-~~w~~~~~~l~~~~~~~~d~~~~~~l~~~k~~~K~~L~~~i~~~~g~~ldp~~LtigfaRRfa~YKR~~L~~~~ 547 (796)
T d1l5wa_ 469 DKSLQ-KEWANDLDQLINLEKFADDAKFRQQYREIKQANKVRLAEFVKVRTGIEINPQAIFDIQIKRLHEYKRQHLNLLH 547 (796)
T ss_dssp HHHCS-SCCTTCGGGGGGGGGGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCTTSEEEEEESCCCGGGTHHHHHHH
T ss_pred Hhhcc-cccccCHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccChhhccchhhhhhhhhhcccchhhh
Confidence 99999 59999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcCCCCcceEEEEcCCCHHHHhhhccC
Q 003188 586 AIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPG 665 (840)
Q Consensus 586 ii~~y~~ik~~~p~~~~~~~p~~~If~GKA~P~y~~aK~iIk~I~~la~~in~d~~~~~~lkVvFl~nYnvslA~~ii~g 665 (840)
++.+|.+|++ +|+. +.+|+||||||||||+|.+||+|||+|++++++||+||++++++||||+|||||++|++|+||
T Consensus 548 i~~l~~~l~~-~~~~--~~~Pvq~IfaGKAhP~d~~gK~iIk~I~~va~~in~dp~~~~~~kVVFlenYdv~lA~~lv~g 624 (796)
T d1l5wa_ 548 ILALYKEIRE-NPQA--DRVPRVFLFGAKAAPGYYLAKNIIFAINKVADVINNDPLVGDKLKVVFLPDYCVSAAEKLIPA 624 (796)
T ss_dssp HHHHHHHHHT-CTTC--CCCCEEEEEECCCCTTCHHHHHHHHHHHHHHHHHHTCTTTGGGEEEEECSSCCHHHHHHHGGG
T ss_pred HHHHHHHHhc-Cccc--CCCceEEEEcCCCCCchHHHHHHHHHHHHHHHHhcCChhhccceeEEEeCCCchHHHHHHhcc
Confidence 9999999987 6543 467999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccCCCCCccCCCcchhHHhhcCceEeeecCchhHHHHHHhcCcceEeecCccccchhhhhhccCCC---CCCChhH
Q 003188 666 SELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAVAEQVPKLRKEREDGL---FKPDPRF 742 (840)
Q Consensus 666 aDv~l~iS~a~~EAsGTs~MKam~NGal~i~tlDGanvEi~~~vG~~N~~~fG~~~d~V~~~~~~~~y~~---~~~~~~l 742 (840)
||||||+|+||+||||||||||||||+|||||||||||||++++|++|+|+||+++++|.++++.+ |+| |+.+|++
T Consensus 625 ~DVwln~p~~p~EASGTSgMKaalNG~lnlstlDGw~vE~~~~vg~eN~f~fG~~~~ev~~~~~~~-y~~~~~y~~~~~l 703 (796)
T d1l5wa_ 625 ADISEQISTAGKEASGTGNMKLALNGALTVGTLDGANVEIAEKVGEENIFIFGHTVEQVKAILAKG-YDPVKWRKKDKVL 703 (796)
T ss_dssp CSEEEECCCTTTCCCCSHHHHHHHTTCEEEECSCTTHHHHHHHHCGGGSEECSCCHHHHHHHHHHC-CCHHHHHHHCHHH
T ss_pred cchhhhCCCCCcccCCchHHHHHHcCCeeeecccchHHHHHHhcCccceEEecCchHHHHHHHhcC-CChHHHhhcCHHH
Confidence 999999999999999999999999999999999999999999999999999999999999998765 998 5779999
Q ss_pred HHHHHHHhcCCCCCCC---hHHHHHHHhh-CCCCCCCccccccCChHHHHHHHHHHHHHhcCHHHHHHHHHHHhccCCCC
Q 003188 743 EEAKQFIRSGAFGSYD---YNPLLDSLEG-NTGYGRGDYFLVGYDFPSYLEAQDRVDQAYKDQKKWLKMSILSTAGSGKF 818 (840)
Q Consensus 743 ~~v~~~~~~G~f~~~~---~~~l~~~L~~-~~~~~~~D~~~~~~Df~~y~~~~~~~~~~Y~d~~~W~~~~~~n~a~~g~F 818 (840)
++|+|+|.+|+|++.+ |++|++.|.. + +|+|||++||+||++||++|.++|.|+++|.+||+.|||.+|+|
T Consensus 704 ~~v~d~i~~g~f~~~~~~~f~~l~~~l~~~~-----~D~y~~~~df~~y~~~q~~v~~~Y~d~~~W~~~~~~nia~~g~F 778 (796)
T d1l5wa_ 704 DAVLKELESGKYSDGDKHAFDQMLHSIGKQG-----GDPYLVMADFAAYVEAQKQVDVLYRDQEAWTRAAILNTARCGMF 778 (796)
T ss_dssp HHHHHHHHHTTTTTTCTTTTHHHHHHTSTTT-----CCTTCHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHCGGG
T ss_pred HHHHHHhhcCCCCCCChHHHHHHHHHHhhcC-----CChhhhhccHHHHHHHHHHHHHhhcCHHHHHHHHHHHHhCCCCc
Confidence 9999999999996665 9999999963 3 79999999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHHHhccc
Q 003188 819 SSDRTIAQYAKEIWNIT 835 (840)
Q Consensus 819 SsDrti~eYa~~iw~~~ 835 (840)
||||||+|||++||+++
T Consensus 779 ssdR~i~eYa~~iw~~~ 795 (796)
T d1l5wa_ 779 SSDRSIRDYQARIWQAK 795 (796)
T ss_dssp BHHHHHHHHHHHTTTSC
T ss_pred ChHHHHHHHHHHHhCcC
Confidence 99999999999999996
No 4
>d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]}
Probab=99.96 E-value=6.8e-29 Score=276.58 Aligned_cols=357 Identities=17% Similarity=0.179 Sum_probs=261.3
Q ss_pred hhhhhHHHHhHHHHHHHHHHHcccCcccccCCCceEEEeCCCcccccHHHHHHHHHhhcCCChhHHhhhcCccEEEeecC
Q 003188 300 LKQQFFLCSASLQDMILRFKERKSGRQWSEFPSKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTVAYTNHT 379 (840)
Q Consensus 300 L~Qeyfl~~a~lqdiir~~~~~~g~~~l~~l~~~~viHlNDtHpalaipElmR~l~d~~~l~~~~A~~i~~~~~vfT~HT 379 (840)
+..+..|+.++.+.+ + .+..-.+|++||+||||++++. .+++.. ......+|+|.|+
T Consensus 108 ~~~~~~~~~~~~~~~----~------~~~~~~~pDIvH~h~~~~~l~~-~~~~~~------------~~~~ip~V~t~H~ 164 (477)
T d1rzua_ 108 WKRFAALSLAAARIG----A------GVLPGWRPDMVHAHDWQAAMTP-VYMRYA------------ETPEIPSLLTIHN 164 (477)
T ss_dssp HHHHHHHHHHHHHHH----T------TCSSSCCCSEEEEEHHHHTTHH-HHHHHS------------SSCCCCEEEEESC
T ss_pred HHHHHHHHHHHHhhh----h------hcccCCCCCEEEecchhHHHHH-HHHHHh------------hCCCCCEEEEEec
Confidence 446667776665421 1 1122257899999999999984 444431 1134579999999
Q ss_pred ChhhhHhhccHHHHHhh-chhHHHHHHHHHHHHHHHHHHhcCCCcccccccccccCCCCCCcccccccccccCCcccchh
Q 003188 380 VLPEALEKWSQAVMWKL-LPRHMEIIEEIDKRFIAMVRSTRSDLESKIPSMCILDNNPKKPVVRMANLCVVSAHTVNGVA 458 (840)
Q Consensus 380 ~~~eglE~w~~~l~~~l-LPr~~~ii~~in~~f~~~~~~~~~~~~~~~~~~~iie~~~~~~~v~Ma~lai~~S~~VNgVS 458 (840)
+.+... |+.+.+..+ .|.+. ++. .-.. ..+.+++...++..|+.++.||
T Consensus 165 ~~~~~~--~~~~~~~~~~~~~~~-----------------~~~--------~~~~---~~~~~~~~~~~~~~ad~~~~vs 214 (477)
T d1rzua_ 165 IAFQGQ--FGANIFSKLALPAHA-----------------FGM--------EGIE---YYNDVSFLKGGLQTATALSTVS 214 (477)
T ss_dssp TTCCCE--ECGGGGGGSCCCGGG-----------------SST--------TTTE---ETTEEEHHHHHHHHCSEEEESC
T ss_pred cccccc--CCHHHHHHhhcchhh-----------------ccc--------cccc---ccchhHHHHHHHHhhhhhhhcc
Confidence 988776 777766654 22221 111 1001 1236788888999999999999
Q ss_pred hhhHHHHHhhhhc-Ccccc---CCCCCcccccccCcccccccCChhhhHHHHhhcCccccccChhhHhhhhccCCCHHHH
Q 003188 459 QLHSDILKADLFA-DYVSL---WPNKLQNKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLLVGLRQFADNTELQ 534 (840)
Q Consensus 459 ~lH~eilk~~~f~-~~~~l---~p~k~~~iTNGI~~rrWl~~~NP~l~~li~~~~g~~~w~~~~~~l~~l~~~~~d~~~~ 534 (840)
+.|++.+....++ +...+ .+.++..|+|||+..+| ||+..++|...... ++
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~ngv~~~~~----~p~~~~~i~~~~~~-----------------~~---- 269 (477)
T d1rzua_ 215 PSYAEEILTAEFGMGLEGVIGSRAHVLHGIVNGIDADVW----NPATDHLIHDNYSA-----------------AN---- 269 (477)
T ss_dssp HHHHHHTTSHHHHTTCHHHHHTTGGGEEECCCCBCTTTS----CTTTCTTSSSCCBT-----------------TB----
T ss_pred HHHHHHHHHHhcCcchhhhhhhccccEEEEECCcchhhc----cccccccccccchh-----------------hh----
Confidence 9999876554443 22222 35678999999999999 89988877666551 21
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCCCCCCceEeecccchhhhhhhhhhhHHHHHHHHHhhcCccccCCCCCeEEEEEec
Q 003188 535 AEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGK 614 (840)
Q Consensus 535 ~~~~~~K~~nK~~L~~~i~~~~G~~~dp~~l~d~~vkR~heYKRq~Lnll~ii~~y~~ik~~~p~~~~~~~p~~~If~GK 614 (840)
. ..+..+++.+. .+.+++ +++.++++++.|++++|+.++ ++..+.+..+ . +.+++++|.
T Consensus 270 --~-~~~~~~~~~~~----~~~~~~-~~~~~~i~~vgrl~~~KG~~~-Ll~a~~~~~~--~----------~~~l~~~G~ 328 (477)
T d1rzua_ 270 --L-KNRALNKKAVA----EHFRID-DDGSPLFCVISRLTWQKGIDL-MAEAVDEIVS--L----------GGRLVVLGA 328 (477)
T ss_dssp --C-TTHHHHHHHHH----HHHTCC-CSSSCEEEEESCBSTTTTHHH-HHTTHHHHHH--T----------TCEEEEEEC
T ss_pred --H-HHhhhhHHHHH----Hhcccc-cCCccEEEEEeeeeecCCcHH-HHHHHHHHHh--h----------CCeEEEEec
Confidence 1 34455666665 477876 678899999999999999999 9998888754 2 467999999
Q ss_pred CCcCCHHHHHHHHHHHHHHhhhcCCcCCCCcceEEEEcCCCHHHHhhhccCccccccCCCCCccCCCcchhHHhhcCceE
Q 003188 615 AFATYTNAKRIVKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLI 694 (840)
Q Consensus 615 A~P~y~~aK~iIk~I~~la~~in~d~~~~~~lkVvFl~nYnvslA~~ii~gaDv~l~iS~a~~EAsGTs~MKam~NGal~ 694 (840)
+.+.+.. .+..++.. .++ +|.|...++..+.+.++++||++.+||+ +|++|++-|-||..|++.
T Consensus 329 G~~~~~~------~~~~~~~~------~~~--~v~~~~~~~~~~~~~~~~~aD~~v~PS~--~E~fglv~lEAma~G~Pv 392 (477)
T d1rzua_ 329 GDVALEG------ALLAAASR------HHG--RVGVAIGYNEPLSHLMQAGCDAIIIPSR--FEPCGLTQLYALRYGCIP 392 (477)
T ss_dssp BCHHHHH------HHHHHHHH------TTT--TEEEEESCCHHHHHHHHHHCSEEEECCS--CCSSCSHHHHHHHHTCEE
T ss_pred CCchHHH------HHHHHHhh------cCC--eEEEEcccChhHHHHHHHhCccccCCcc--ccCCCHHHHHHHHcCCCE
Confidence 8776554 24445543 456 8999999999999999999999999999 899999999999999999
Q ss_pred eeecCchhHHHHHHhcCcceEeecCccccchhhhhhccCCCCCCChhHHHHHHHHhcCC-CCCCChHHHHHHHhhCCCCC
Q 003188 695 IGTLDGANVEIRQEIGEENFFLFGAVAEQVPKLRKEREDGLFKPDPRFEEAKQFIRSGA-FGSYDYNPLLDSLEGNTGYG 773 (840)
Q Consensus 695 i~tlDGanvEi~~~vG~~N~~~fG~~~d~V~~~~~~~~y~~~~~~~~l~~v~~~~~~G~-f~~~~~~~l~~~L~~~~~~~ 773 (840)
|+|-.|+..|+++. +++ .. +.....+|+ |.+.|.++|.++|.
T Consensus 393 Vas~~GG~~E~v~d--~~~--------~~---------------------~~~~~~~G~l~~~~d~~~la~ai~------ 435 (477)
T d1rzua_ 393 VVARTGGLADTVID--ANH--------AA---------------------LASKAATGVQFSPVTLDGLKQAIR------ 435 (477)
T ss_dssp EEESSHHHHHHCCB--CCH--------HH---------------------HHTTCCCBEEESSCSHHHHHHHHH------
T ss_pred EEcCCCCCcceeec--CCc--------cc---------------------cccCCCceEEeCCCCHHHHHHHHH------
Confidence 99988887665432 100 00 011124564 77888999999997
Q ss_pred CCccccccCChHHHHHHHHHHHHHhcCHHHHHHHHHHHhccCCCCChHHHHHHHHH
Q 003188 774 RGDYFLVGYDFPSYLEAQDRVDQAYKDQKKWLKMSILSTAGSGKFSSDRTIAQYAK 829 (840)
Q Consensus 774 ~~D~~~~~~Df~~y~~~~~~~~~~Y~d~~~W~~~~~~n~a~~g~FSsDrti~eYa~ 829 (840)
++.+.|.|++.|.+|+.++|+. .||||+++++|.+
T Consensus 436 -------------------~~l~~~~~~~~~~~~~~~a~~~--~fsw~~~a~~~~~ 470 (477)
T d1rzua_ 436 -------------------RTVRYYHDPKLWTQMQKLGMKS--DVSWEKSAGLYAA 470 (477)
T ss_dssp -------------------HHHHHHTCHHHHHHHHHHHHTC--CCBHHHHHHHHHH
T ss_pred -------------------HHHhhhCCHHHHHHHHHHHHHh--hCCHHHHHHHHHH
Confidence 8888899999999999999987 7999999999976
No 5
>d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]}
Probab=99.66 E-value=1.9e-14 Score=153.93 Aligned_cols=256 Identities=17% Similarity=0.109 Sum_probs=172.3
Q ss_pred CCceEEEeCCCcccccHHHHHHHHHhhcCCChhHHhhhcCccEEEeecCChhhhHhhccHHHHHhhchhHHHHHHHHHHH
Q 003188 331 PSKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEALEKWSQAVMWKLLPRHMEIIEEIDKR 410 (840)
Q Consensus 331 ~~~~viHlNDtHpalaipElmR~l~d~~~l~~~~A~~i~~~~~vfT~HT~~~eglE~w~~~l~~~lLPr~~~ii~~in~~ 410 (840)
+.|++||+|++|++++. -+++.. .+..+++|.|++.+.. ++...+...
T Consensus 119 ~~pDiIh~~~~~~~~~~-~~~~~~--------------~~~~~v~~~h~~~~~~---~~~~~~~~~-------------- 166 (437)
T d2bisa1 119 PLPDVVHFHDWHTVFAG-ALIKKY--------------FKIPAVFTIHRLNKSK---LPAFYFHEA-------------- 166 (437)
T ss_dssp CCCSEEEEETGGGHHHH-HHHHHH--------------HCCCEEEEESSCCCCC---EEHHHHHHT--------------
T ss_pred CCCCEEEECChhhhhHh-hhhhcc--------------ccCceeEEEeeccccc---cchhhhhhc--------------
Confidence 56789999999998864 333321 2356899999998865 443333321
Q ss_pred HHHHHHHhcCCCcccccccccccCCCCCCcccccccccccCCcccchhhhhHHHHHhhhhcCccccCCCCCcccccccCc
Q 003188 411 FIAMVRSTRSDLESKIPSMCILDNNPKKPVVRMANLCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITP 490 (840)
Q Consensus 411 f~~~~~~~~~~~~~~~~~~~iie~~~~~~~v~Ma~lai~~S~~VNgVS~lH~eilk~~~f~~~~~l~p~k~~~iTNGI~~ 490 (840)
+.. . .. ....++....++..|+.+..++.-+...... +....+.++.-|.||+++
T Consensus 167 ---------~~~-----~---~~---~~~~~~~~~~~~~~~d~v~~~~~~~~~~~~~-----~~~~~~~ki~vi~~g~d~ 221 (437)
T d2bisa1 167 ---------GLS-----E---LA---PYPDIDPEHTGGYIADIVTTVSRGYLIDEWG-----FFRNFEGKITYVFNGIDC 221 (437)
T ss_dssp ---------TCG-----G---GC---CSSEECHHHHHHHHSSEEEESCHHHHHHTHH-----HHGGGTTTEEECCCCCCT
T ss_pred ---------cch-----h---hh---hHHHHHHHHHHHHhhhhhcccchhhhhhhhh-----hhccccCceEEEeccccc
Confidence 110 0 01 1235677788888999999998876643321 234457788889999999
Q ss_pred ccccccCChhhhHHHHhhcCccccccChhhHhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCceEeec
Q 003188 491 RRWLRFCNPELSKIITKWLKTDQWVTNLDLLVGLRQFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQV 570 (840)
Q Consensus 491 rrWl~~~NP~l~~li~~~~g~~~w~~~~~~l~~l~~~~~d~~~~~~~~~~K~~nK~~L~~~i~~~~G~~~dp~~l~d~~v 570 (840)
..|. |.. ... .+...|..+. +++|.. +.+.++++
T Consensus 222 ~~~~----~~~--------------------------~~~---------~~~~~~~~~~----~~~~~~---~~~~i~~~ 255 (437)
T d2bisa1 222 SFWN----ESY--------------------------LTG---------SRDERKKSLL----SKFGMD---EGVTFMFI 255 (437)
T ss_dssp TTSC----GGG--------------------------CCS---------CHHHHHHHHH----HHTTCC---SCEEEEEE
T ss_pred cccc----ccc--------------------------cch---------hhHHHHHhhh----hhhhcc---CCceEEEe
Confidence 8883 221 111 1223333333 366653 45788899
Q ss_pred ccchh-hhhhhhhhhHHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcCCCCcceEE
Q 003188 571 KRIHE-YKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYLKVV 649 (840)
Q Consensus 571 kR~he-YKRq~Lnll~ii~~y~~ik~~~p~~~~~~~p~~~If~GKA~P~y~~aK~iIk~I~~la~~in~d~~~~~~lkVv 649 (840)
.|+.. +|+..+ ++..+..+...+. ..++++++.|++.+.+.. .+..+.+. .+. .++
T Consensus 256 G~~~~~~Kg~~~-ll~a~~~~~~~~~--------~~~~~lvi~G~~~~~~~~------~~~~~~~~------~~~--~~~ 312 (437)
T d2bisa1 256 GRFDRGQKGVDV-LLKAIEILSSKKE--------FQEMRFIIIGKGDPELEG------WARSLEEK------HGN--VKV 312 (437)
T ss_dssp SCBCSSSSCHHH-HHHHHHHHTTSGG--------GGGEEEEEECCBCHHHHH------HHHHHHHT------CTT--EEE
T ss_pred ecccccchhHHH-HHhhhcccccccc--------cccceeeeeccccccccc------chhhhccc------ccc--cee
Confidence 99964 799999 8888877754222 136899999999877664 23444442 333 455
Q ss_pred EEcCCCHHHHhhhccCccccccCCCCCccCCCcchhHHhhcCceEeeecCchhHHHHHHhcCcceEee
Q 003188 650 FVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLF 717 (840)
Q Consensus 650 Fl~nYnvslA~~ii~gaDv~l~iS~a~~EAsGTs~MKam~NGal~i~tlDGanvEi~~~vG~~N~~~f 717 (840)
|..-...+....++.+||+..++|+ .|++|++-|-+|..|.+.|+|-.|...|+++ ++|+++|
T Consensus 313 ~~~~~~~~~~~~~~~~adi~v~~s~--~e~~~~~~~Eama~G~Pvi~~~~g~~~e~i~---~~~G~~~ 375 (437)
T d2bisa1 313 ITEMLSREFVRELYGSVDFVIIPSY--FEPFGLVALEAMCLGAIPIASAVGGLRDIIT---NETGILV 375 (437)
T ss_dssp ECSCCCHHHHHHHHTTCSEEEECCS--CCSSCHHHHHHHTTTCEEEEESCTTHHHHCC---TTTCEEE
T ss_pred ccccCcHHHHHHHHhhhcccccccc--ccccchHHHHHHHCCCCEEEeCCCCcHHhEE---CCcEEEE
Confidence 5555578888899999999999999 8999999999999999999998787655442 2355544
No 6
>d2bfwa1 c.87.1.8 (A:218-413) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]}
Probab=98.93 E-value=2.8e-09 Score=103.76 Aligned_cols=141 Identities=18% Similarity=0.108 Sum_probs=102.3
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCceEeecccch-hhhhhhhhhhHHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCH
Q 003188 542 MASKKHLADYIWRVTGVTIDPNSLFDIQVKRIH-EYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYT 620 (840)
Q Consensus 542 ~~nK~~L~~~i~~~~G~~~dp~~l~d~~vkR~h-eYKRq~Lnll~ii~~y~~ik~~~p~~~~~~~p~~~If~GKA~P~y~ 620 (840)
...|+.+. +++|++ +.+.++++.|+. .+|++++ ++.++..+.+-+. ..+++|++.|.+.|.+.
T Consensus 17 ~~~~~~~~----~~~~l~---~~~~il~~Grl~~~~Kg~~~-li~a~~~l~~~~~--------~~~~~l~i~G~g~~~~~ 80 (196)
T d2bfwa1 17 DERKKSLL----SKFGMD---EGVTFMFIGRFDRGQKGVDV-LLKAIEILSSKKE--------FQEMRFIIIGKGDPELE 80 (196)
T ss_dssp HHHHHHHH----HHTTCC---SCEEEEEESCBCSSSSCHHH-HHHHHHHHTTSGG--------GGGEEEEEECCBCHHHH
T ss_pred HHHHHHHH----HHhCCC---CCCEEEEEcCCCccccCHHH-HHHHHHhhhcccC--------CCCeEEEEEeecccchh
Confidence 44555555 477874 667788999996 5999999 9888877754221 12589999999877655
Q ss_pred HHHHHHHHHHHHHhhhcCCcCCCCcceEEEEcCCCHHHHhhhccCccccccCCCCCccCCCcchhHHhhcCceEeeecCc
Q 003188 621 NAKRIVKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDG 700 (840)
Q Consensus 621 ~aK~iIk~I~~la~~in~d~~~~~~lkVvFl~nYnvslA~~ii~gaDv~l~iS~a~~EAsGTs~MKam~NGal~i~tlDG 700 (840)
. .+..+.+. ... .+.+....+.+....++.+||+..+||+ .|.+|++-+-+|..|.+.|++-.|
T Consensus 81 ~------~~~~~~~~------~~~--~~~~~~~~~~~~l~~~~~~~di~v~ps~--~e~~~~~~~Eam~~G~pvI~~~~~ 144 (196)
T d2bfwa1 81 G------WARSLEEK------HGN--VKVITEMLSREFVRELYGSVDFVIIPSY--FEPFGLVALEAMCLGAIPIASAVG 144 (196)
T ss_dssp H------HHHHHHHH------CTT--EEEECSCCCHHHHHHHHTTCSEEEECCS--CCSSCHHHHHHHHTTCEEEEESCH
T ss_pred h------hhhhhhhc------cce--eEEeeeccccccchhccccccccccccc--cccccccchhhhhcCceeeecCCC
Confidence 4 23333332 333 4555566667788899999999999999 899999999999999999999887
Q ss_pred hhHHHHHHhcCcceEee
Q 003188 701 ANVEIRQEIGEENFFLF 717 (840)
Q Consensus 701 anvEi~~~vG~~N~~~f 717 (840)
+.-|++ .+.++|+|
T Consensus 145 ~~~e~i---~~~~g~~~ 158 (196)
T d2bfwa1 145 GLRDII---TNETGILV 158 (196)
T ss_dssp HHHHHC---CTTTCEEE
T ss_pred ccceee---cCCceeeE
Confidence 764443 23345544
No 7
>d2iw1a1 c.87.1.8 (A:2-371) Lipopolysaccharide core biosynthesis protein RfaG {Escherichia coli [TaxId: 562]}
Probab=98.55 E-value=8.6e-07 Score=90.14 Aligned_cols=124 Identities=17% Similarity=0.165 Sum_probs=87.3
Q ss_pred HHhCCCCCCCCceEeecccchhhhhhhhhhhHHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHH
Q 003188 554 RVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVG 633 (840)
Q Consensus 554 ~~~G~~~dp~~l~d~~vkR~heYKRq~Lnll~ii~~y~~ik~~~p~~~~~~~p~~~If~GKA~P~y~~aK~iIk~I~~la 633 (840)
+..|+ .++.+..+++.|+..+|+.++ ++.++.++.+- .+. ...++++|.+.+. .+-+++.++.
T Consensus 187 ~~~~~--~~~~~~i~~~gr~~~~Kg~~~-li~a~~~l~~~---~~~------~~~~ii~g~~~~~-----~~~~~~~~~~ 249 (370)
T d2iw1a1 187 QKNGI--KEQQNLLLQVGSDFGRKGVDR-SIEALASLPES---LRH------NTLLFVVGQDKPR-----KFEALAEKLG 249 (370)
T ss_dssp HHTTC--CTTCEEEEEECSCTTTTTHHH-HHHHHHTSCHH---HHH------TEEEEEESSSCCH-----HHHHHHHHHT
T ss_pred hccCC--CccceEEEEEeccccccchhh-hcccccccccc---ccc------ceeeecccccccc-----cccccccccc
Confidence 35564 467899999999999999999 88887776442 111 3455666655542 1222333332
Q ss_pred hhhcCCcCCCCcceEEEEcCCCHHHHhhhccCccccccCCCCCccCCCcchhHHhhcCceEeeecCchhHHHHHH
Q 003188 634 EVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQE 708 (840)
Q Consensus 634 ~~in~d~~~~~~lkVvFl~nYnvslA~~ii~gaDv~l~iS~a~~EAsGTs~MKam~NGal~i~tlDGanvEi~~~ 708 (840)
..+ +|.|+... ..++ .+++.||++.+||+ .|.+|++-+-||..|.+.|+|-.|...|++..
T Consensus 250 --------~~~--~v~~~g~~-~~~~-~~~~~adv~v~ps~--~E~~~~~~~EAma~G~PvI~s~~~g~~e~i~~ 310 (370)
T d2iw1a1 250 --------VRS--NVHFFSGR-NDVS-ELMAAADLLLHPAY--QEAAGIVLLEAITAGLPVLTTAVCGYAHYIAD 310 (370)
T ss_dssp --------CGG--GEEEESCC-SCHH-HHHHHCSEEEECCS--CCSSCHHHHHHHHHTCCEEEETTSTTTHHHHH
T ss_pred --------ccc--cccccccc-cccc-cccccccccccccc--cccccceeeecccCCeeEEEeCCCChHHHhcC
Confidence 233 67777543 3444 57899999999999 89999999999999999999977776665543
No 8
>d1uqta_ c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA {Escherichia coli [TaxId: 562]}
Probab=98.46 E-value=4.8e-06 Score=91.68 Aligned_cols=119 Identities=8% Similarity=-0.050 Sum_probs=84.9
Q ss_pred CCceEeecccchhhhhhhhhhhHHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCH-HHHHHHHHHHHHHhhhcC---
Q 003188 563 NSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYT-NAKRIVKLVNDVGEVVNT--- 638 (840)
Q Consensus 563 ~~l~d~~vkR~heYKRq~Lnll~ii~~y~~ik~~~p~~~~~~~p~~~If~GKA~P~y~-~aK~iIk~I~~la~~in~--- 638 (840)
+..+++.|.|+...|+... ++....++++ . +|+.+ ..+++|..|.+..... .-.++...+.+++..||.
T Consensus 253 ~~~~il~V~Rld~~KGi~~-~l~A~~~~l~--~-~p~~~---~~v~lv~~~~~~~~~~~~~~~~~~ev~~lv~~in~~~~ 325 (456)
T d1uqta_ 253 NVQNIFSVERLDYSKGLPE-RFLAYEALLE--K-YPQHH---GKIRYTQIAPTSRGDVQAYQDIRHQLENEAGRINGKYG 325 (456)
T ss_dssp TCEEEEEECCBCGGGCHHH-HHHHHHHHHH--H-CGGGT---TTEEEEEECCBCSTTSHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCeEEEEeCCCchhhchHH-HHHHHHHHHH--h-Ccccc---ccEEEEEEcCCcccchHHHHHHHHHHHHHHHHHHhhhc
Confidence 5689999999999999999 9999888865 4 66643 2466666665544332 222334445555544442
Q ss_pred CcCCCCcceEEEEcCCCHHHHhhhccCccccccCCCCCccCCCcchhHHhhcCc
Q 003188 639 DPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGC 692 (840)
Q Consensus 639 d~~~~~~lkVvFl~nYnvslA~~ii~gaDv~l~iS~a~~EAsGTs~MKam~NGa 692 (840)
.....+ .|.+....+...--.++.+||+.+.+|+ .|.-|+.-+=||.-|.
T Consensus 326 ~~~~~~--~v~~~~~~~~~~l~a~~~~Adv~v~~s~--~EG~~lv~~Ea~a~~~ 375 (456)
T d1uqta_ 326 QLGWTP--LYYLNQHFDRKLLMKIFRYSDVGLVTPL--RDGMNLVAKEYVAAQD 375 (456)
T ss_dssp BTTBCS--EEEECSCCCHHHHHHHHHHCSEEEECCS--SBSCCHHHHHHHHHSC
T ss_pred cCCCCc--eeeccCCcCHHHHhHHHhhhceeecCCc--cCCCCcHHHHHHHhCC
Confidence 223344 5667777777777788999999999999 8999999999997654
No 9
>d2f9fa1 c.87.1.8 (A:2-167) First mannosyl transferase WbaZ {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=97.98 E-value=8.1e-06 Score=76.75 Aligned_cols=126 Identities=19% Similarity=0.125 Sum_probs=90.0
Q ss_pred CCCceEeecccchhhhhhhhhhhHHHHHHHHHhhcCccccCCCCCeEEEEEecCCcCCHHHHHHHHHHHHHHhhhcCCcC
Q 003188 562 PNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPE 641 (840)
Q Consensus 562 p~~l~d~~vkR~heYKRq~Lnll~ii~~y~~ik~~~p~~~~~~~p~~~If~GKA~P~y~~aK~iIk~I~~la~~in~d~~ 641 (840)
+..-|..++.|+..+|+.++ ++.++.+ ++ .+.+++.|.+..+.. .+.+.+.+ .+.
T Consensus 10 ~~~~~~l~iGrl~~~K~~~~-~i~a~~~---l~-----------~~~l~ivg~~~~~~~-~~~~~~~~---~~~------ 64 (166)
T d2f9fa1 10 CYGDFWLSVNRIYPEKRIEL-QLEVFKK---LQ-----------DEKLYIVGWFSKGDH-AERYARKI---MKI------ 64 (166)
T ss_dssp CCCSCEEEECCSSGGGTHHH-HHHHHHH---CT-----------TSCEEEEBCCCTTST-HHHHHHHH---HHH------
T ss_pred CCCCEEEEEecCccccCHHH-HHHHHHH---hc-----------CCeEEEEEecccccc-hhhhhhhh---ccc------
Confidence 34466779999999999999 8876543 32 234566665544332 23333333 332
Q ss_pred CCCcceEEEEcCCCHHHHhhhccCccccccCCCCCccCCCcchhHHhhcCceEeeecCchhHHHHHHhcCcceEeec
Q 003188 642 VNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFG 718 (840)
Q Consensus 642 ~~~~lkVvFl~nYnvslA~~ii~gaDv~l~iS~a~~EAsGTs~MKam~NGal~i~tlDGanvEi~~~vG~~N~~~fG 718 (840)
..+ +|.|+...+-+-...++..||+..+||+ .|.+|.+-|-+|..|.+.|++-.|+.-|++.. ++++|++.
T Consensus 65 ~~~--~v~~~g~~~~~~~~~~~~~ad~~i~ps~--~e~~~~~~~Ea~~~g~pvi~s~~~~~~e~i~~--~~~g~~~~ 135 (166)
T d2f9fa1 65 APD--NVKFLGSVSEEELIDLYSRCKGLLCTAK--DEDFGLTPIEAMASGKPVIAVNEGGFKETVIN--EKTGYLVN 135 (166)
T ss_dssp SCT--TEEEEESCCHHHHHHHHHHCSEEEECCS--SCCSCHHHHHHHHTTCCEEEESSHHHHHHCCB--TTTEEEEC
T ss_pred ccC--cEEEeecccccccccccccccccccccc--cccccccccccccccccceeecCCcceeeecC--CcccccCC
Confidence 234 6999887777878889999999999999 99999999999999999999988887655422 35666554
No 10
>d1m1nb_ c.92.2.3 (B:) Nitrogenase iron-molybdenum protein, beta chain {Azotobacter vinelandii [TaxId: 354]}
Probab=42.05 E-value=36 Score=36.34 Aligned_cols=145 Identities=13% Similarity=0.004 Sum_probs=86.5
Q ss_pred hhcccccccCCCCCCHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCceEEEEEeh
Q 003188 14 KLAKIPAAANPLANEPSAIASNISYHVQYSPHFSPTKFEPEQAFFATAESVRDRLIQQWNETYHHFNKVDPKQTYYLSME 93 (840)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~at~~~~y~ala~~vrd~l~~~w~~t~~~~~~~~~k~vyYlSmE 93 (840)
++-.+|....+.+...+. -..+.+.|...+|++... . + ..=|.++.+.+.+++... ..|++.-+ .+
T Consensus 306 ~~~g~p~~~~~~P~Gi~~-Td~fL~~la~~~G~~v~~----~----i-~~er~~~~d~~~d~~~~l---~Gkr~aI~-gd 371 (522)
T d1m1nb_ 306 GTWKHEVPKLNIPMGLDW-TDEFLMKVSEISGQPIPA----S----L-TKERGRLVDMMTDSHTWL---HGKRFALW-GD 371 (522)
T ss_dssp HTTCCCCCCCCCSBHHHH-HHHHHHHHHHHHCCCCCH----H----H-HHHHHHHHHHHHHHHHHH---TTCEEEEE-CC
T ss_pred HhhCCceeecCCcccHHH-HHHHHHHHHHHhCCChHH----H----H-HHHHHHHHHHHHHHHHhc---CCCEEEEE-CC
Confidence 344677654444443322 233555566667776421 1 1 222566777777777665 45777643 34
Q ss_pred hccccchhHHhhccChH--------------HHHHHHHHhcC----------CChHHHHhh----ccccCCCCCCcccch
Q 003188 94 FLQGRTLTNAIGSLDIQ--------------NAYADALNNLG----------HVLEEIAEQ----EKDAALGNGGLGRLA 145 (840)
Q Consensus 94 fl~Gr~L~nnl~NLg~~--------------~~~~eaL~~lg----------~~~~~l~~~----E~d~~LgnGGLGrLA 145 (840)
=...-.|..-|..||+. +.+++.|++.+ -|+.+|.+. .+|.-+||.---.+|
T Consensus 372 ~~~~~~l~~fL~ElG~epv~v~~~~~~~~~~~~~~~~l~~~~~g~~~~V~~~~Dl~~l~~~i~~~~pDlliG~s~~k~l~ 451 (522)
T d1m1nb_ 372 PDFVMGLVKFLLELGCEPVHILCHNGNKRWKKAVDAILAASPYGKNATVYIGKDLWHLRSLVFTDKPDFMIGNSYGKFIQ 451 (522)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEETTCCHHHHHHHHHHHHTSGGGTTCEEEESCCHHHHHHHHHHSCCSEEEECTTHHHHH
T ss_pred cHHHHHHHHHHHHcCCeEEEEeecCCCHHHHHHHHHHHhhccCCCCCEEEECCCHHHHHHHHhhCCCCEEEECCcchhhh
Confidence 32233355566677753 66677776643 477666553 688889886444567
Q ss_pred hhhHhhhhccCCCeEEEe--eccCCccce
Q 003188 146 SCFLDSMATLNLPAWGYG--LRYRYGLFK 172 (840)
Q Consensus 146 ac~ldS~a~l~~p~~G~G--lrY~~G~F~ 172 (840)
.+..-.+..+|+|++-+| +..+.|+.+
T Consensus 452 ~~~~~~a~~lgiP~ir~gfPi~dr~~~~~ 480 (522)
T d1m1nb_ 452 RDTLHKGKEFEVPLIRIGFPIFDRHHLHR 480 (522)
T ss_dssp HHHHHHCGGGCCCEEECSSCCCSSSSGGG
T ss_pred hhhhhhHHhcCCCEEEeeCCeEEEEcCCC
Confidence 777778899999998766 455655533
No 11
>d1qh8b_ c.92.2.3 (B:) Nitrogenase iron-molybdenum protein, beta chain {Klebsiella pneumoniae [TaxId: 573]}
Probab=33.83 E-value=46 Score=35.42 Aligned_cols=142 Identities=17% Similarity=0.057 Sum_probs=82.4
Q ss_pred hcccccccCCCCCCHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCceEEEEEehh
Q 003188 15 LAKIPAAANPLANEPSAIASNISYHVQYSPHFSPTKFEPEQAFFATAESVRDRLIQQWNETYHHFNKVDPKQTYYLSMEF 94 (840)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~at~~~~y~ala~~vrd~l~~~w~~t~~~~~~~~~k~vyYlSmEf 94 (840)
+-.||....+.+...+.- ..+.+.|...+|++..+. + ..=|.++.+...+++... ..|||.-+ .+-
T Consensus 304 ~~G~p~~~~~~P~Gi~~T-d~fL~~la~~~g~~~~~~--------i-~~er~r~~da~~d~~~~l---~GkrvaI~-gd~ 369 (519)
T d1qh8b_ 304 MWNQPATEVAIPLGLAAT-DELLMTVSQLSGKPIADA--------L-TLERGRLVDMMLDSHTWL---HGKKFGLY-GDP 369 (519)
T ss_dssp TTCCCCCCCCCCBSHHHH-HHHHHHHHHHHCCCCCHH--------H-HHHHHHHHHHHHHHHHHH---TTCEEEEE-SCH
T ss_pred HhCCCeEeecccCCHHHH-HHHHHHHHHHhCCCchHH--------H-HHHHHHHHHHHHHHHHHc---CCcEEEEE-CCc
Confidence 336777665555544322 335555566677775321 1 123556666666666655 45777754 332
Q ss_pred ccccchhHHhhccCh--------------HHHHHHHHHhc----------CCChHHHHh----hccccCCCCCCcccchh
Q 003188 95 LQGRTLTNAIGSLDI--------------QNAYADALNNL----------GHVLEEIAE----QEKDAALGNGGLGRLAS 146 (840)
Q Consensus 95 l~Gr~L~nnl~NLg~--------------~~~~~eaL~~l----------g~~~~~l~~----~E~d~~LgnGGLGrLAa 146 (840)
-.--.|..-|.-+|+ .+..++.|++. |-|+.+|.+ ..+|.-+||-=--.+|-
T Consensus 370 ~~~~~la~fL~ElG~e~~~v~~~~~~~~~~~~~~~~l~~~~~g~~~~v~~~~Dl~~l~~~i~~~~pDLliG~s~~k~ia~ 449 (519)
T d1qh8b_ 370 DFVMGLTRFLLELGCEPTVILSHNANKRWQKAMNKMLDASPYGRDSEVFINCDLWHFRSLMFTRQPDFMIGNSYGKFIQR 449 (519)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEETTCCHHHHHHHHHHHHHSTTCTTCEEEESCCHHHHHHHHHHHCCSEEEECTTHHHHHH
T ss_pred HHHHHHHHHHHHcCCeeeEEEecCCCHHHHHHHHHHHHhCcCCCCCEEEECCCHHHHHHHHhhcCCCEEEECCcchhhhh
Confidence 222234444445554 36777888775 357766665 57999998864334555
Q ss_pred hhHhhhhccCCCeEEEe--eccCCcc
Q 003188 147 CFLDSMATLNLPAWGYG--LRYRYGL 170 (840)
Q Consensus 147 c~ldS~a~l~~p~~G~G--lrY~~G~ 170 (840)
+..-..+.+|+|++-+| +.-+.|+
T Consensus 450 ~~~~~~~~l~iP~ir~gfPi~dr~~~ 475 (519)
T d1qh8b_ 450 DTLAKGKAFEVPLIRLGFPLFDRHHL 475 (519)
T ss_dssp HHHHHCGGGCCCEEECSSCCCSSSSG
T ss_pred hhhhhhhhcCCCeEEecCCEEEEecC
Confidence 66667788999998655 3344443
Done!