Query 003189
Match_columns 840
No_of_seqs 505 out of 3347
Neff 8.4
Searched_HMMs 46136
Date Thu Mar 28 18:45:01 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/003189.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/003189hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0204 Calcium transporting A 100.0 2E-188 5E-193 1550.8 61.2 814 4-840 2-828 (1034)
2 KOG0202 Ca2+ transporting ATPa 100.0 5E-133 1E-137 1111.1 59.9 699 120-838 8-765 (972)
3 TIGR01517 ATPase-IIB_Ca plasma 100.0 3E-125 5E-130 1157.3 83.6 737 92-839 14-757 (941)
4 TIGR01523 ATPase-IID_K-Na pota 100.0 5E-120 1E-124 1108.8 77.9 688 119-838 10-833 (1053)
5 COG0474 MgtA Cation transport 100.0 4E-119 9E-124 1091.4 68.1 678 123-839 32-727 (917)
6 TIGR01106 ATPase-IIC_X-K sodiu 100.0 1E-116 2E-121 1083.4 78.4 698 119-839 20-772 (997)
7 PRK10517 magnesium-transportin 100.0 6E-117 1E-121 1069.1 74.7 653 120-837 53-723 (902)
8 PRK15122 magnesium-transportin 100.0 5E-116 1E-120 1063.2 75.4 661 120-838 31-724 (903)
9 TIGR01524 ATPase-IIIB_Mg magne 100.0 9E-116 2E-120 1060.1 77.4 653 120-838 19-689 (867)
10 TIGR01522 ATPase-IIA2_Ca golgi 100.0 6E-115 1E-119 1059.2 79.8 673 119-838 7-705 (884)
11 TIGR01647 ATPase-IIIA_H plasma 100.0 7E-112 2E-116 1013.9 71.4 617 135-838 1-621 (755)
12 TIGR01116 ATPase-IIA1_Ca sarco 100.0 1E-108 2E-113 1006.6 74.8 659 167-837 1-716 (917)
13 TIGR01657 P-ATPase-V P-type AT 100.0 2E-104 5E-109 980.9 64.5 642 133-833 137-881 (1054)
14 KOG0203 Na+/K+ ATPase, alpha s 100.0 1E-104 2E-109 882.2 34.7 695 117-837 40-792 (1019)
15 PRK14010 potassium-transportin 100.0 2.3E-96 5E-101 851.1 60.3 549 170-836 29-588 (673)
16 PRK01122 potassium-transportin 100.0 7.1E-95 1.5E-99 839.5 61.5 554 169-837 29-592 (679)
17 COG2217 ZntA Cation transport 100.0 2.1E-95 4E-100 842.9 41.3 651 42-834 13-682 (713)
18 TIGR01652 ATPase-Plipid phosph 100.0 5E-93 1.1E-97 882.4 57.4 663 150-839 1-856 (1057)
19 TIGR01497 kdpB K+-transporting 100.0 9.5E-91 2.1E-95 803.0 60.1 545 169-826 28-583 (675)
20 PLN03190 aminophospholipid tra 100.0 2.4E-86 5.3E-91 813.4 64.6 666 149-839 86-959 (1178)
21 PRK11033 zntA zinc/cadmium/mer 100.0 2.2E-84 4.9E-89 774.2 56.4 640 43-834 65-711 (741)
22 KOG0207 Cation transport ATPas 100.0 6.3E-86 1.4E-90 744.9 36.9 663 44-832 159-866 (951)
23 KOG0208 Cation transport ATPas 100.0 4.1E-83 8.9E-88 720.5 45.8 645 132-830 157-929 (1140)
24 KOG0205 Plasma membrane H+-tra 100.0 3.1E-83 6.8E-88 690.6 39.0 635 117-826 19-659 (942)
25 TIGR01511 ATPase-IB1_Cu copper 100.0 6.4E-80 1.4E-84 717.3 53.6 535 160-834 2-549 (562)
26 TIGR01525 ATPase-IB_hvy heavy 100.0 3.6E-79 7.9E-84 713.3 52.9 512 200-835 18-531 (556)
27 TIGR01494 ATPase_P-type ATPase 100.0 1.3E-78 2.8E-83 702.3 54.5 480 209-836 5-486 (499)
28 PRK10671 copA copper exporting 100.0 2E-78 4.2E-83 737.6 58.2 653 43-832 111-793 (834)
29 TIGR01512 ATPase-IB2_Cd heavy 100.0 1.3E-77 2.8E-82 695.8 54.3 503 179-835 5-510 (536)
30 KOG0209 P-type ATPase [Inorgan 100.0 7.2E-69 1.6E-73 592.0 34.9 581 134-776 161-832 (1160)
31 KOG0206 P-type ATPase [General 100.0 2.8E-68 6E-73 631.1 35.4 667 146-839 28-882 (1151)
32 KOG0210 P-type ATPase [Inorgan 100.0 1E-66 2.3E-71 565.1 32.5 640 146-835 75-865 (1051)
33 COG2216 KdpB High-affinity K+ 100.0 2.6E-61 5.7E-66 510.8 35.5 482 218-810 84-568 (681)
34 PF00122 E1-E2_ATPase: E1-E2 A 100.0 8.8E-35 1.9E-39 303.4 23.8 223 207-446 3-230 (230)
35 PF00702 Hydrolase: haloacid d 99.9 1.4E-23 3.1E-28 216.1 15.0 97 648-770 115-215 (215)
36 COG4087 Soluble P-type ATPase 99.6 9E-15 2E-19 129.9 9.9 124 650-802 20-145 (152)
37 KOG4383 Uncharacterized conser 99.6 1.6E-12 3.5E-17 142.9 29.3 253 582-837 698-1110(1354)
38 PF12515 CaATP_NAI: Ca2+-ATPas 99.5 1.8E-15 3.9E-20 109.7 2.2 46 4-50 1-46 (47)
39 PF13246 Hydrolase_like2: Puta 99.5 4.9E-14 1.1E-18 123.5 8.8 87 507-594 2-91 (91)
40 PRK10513 sugar phosphate phosp 99.2 4.2E-10 9E-15 120.4 14.6 68 736-804 195-265 (270)
41 PRK15126 thiamin pyrimidine py 99.1 1.1E-09 2.5E-14 117.2 13.9 145 659-804 18-259 (272)
42 PF00690 Cation_ATPase_N: Cati 99.1 2.3E-10 5.1E-15 94.8 6.5 67 118-186 3-69 (69)
43 PRK11133 serB phosphoserine ph 99.1 9.6E-10 2.1E-14 119.2 12.6 129 660-804 181-316 (322)
44 COG0561 Cof Predicted hydrolas 99.1 2.1E-09 4.6E-14 114.5 14.7 144 661-805 21-259 (264)
45 PRK10976 putative hydrolase; P 99.0 2.6E-09 5.7E-14 114.0 14.7 68 736-804 189-261 (266)
46 TIGR02137 HSK-PSP phosphoserin 99.0 1.5E-09 3.2E-14 110.3 11.8 129 660-806 68-198 (203)
47 PRK01158 phosphoglycolate phos 99.0 2.7E-09 5.8E-14 111.3 14.0 144 660-804 20-226 (230)
48 TIGR01487 SPP-like sucrose-pho 99.0 1.7E-09 3.7E-14 111.5 11.6 142 660-802 18-214 (215)
49 PLN02887 hydrolase family prot 99.0 5.6E-09 1.2E-13 121.1 14.9 68 736-804 506-576 (580)
50 PF08282 Hydrolase_3: haloacid 99.0 4.1E-09 9E-14 110.9 12.7 145 658-803 13-254 (254)
51 TIGR00338 serB phosphoserine p 99.0 3.5E-09 7.6E-14 109.5 11.4 128 660-802 85-218 (219)
52 smart00831 Cation_ATPase_N Cat 98.9 2.2E-09 4.7E-14 87.7 7.0 62 127-190 2-63 (64)
53 TIGR01482 SPP-subfamily Sucros 98.9 1.2E-08 2.5E-13 106.0 12.9 144 660-804 15-222 (225)
54 PRK10530 pyridoxal phosphate ( 98.9 2.7E-08 5.9E-13 106.5 14.1 68 736-804 198-268 (272)
55 COG0560 SerB Phosphoserine pho 98.8 1.6E-08 3.4E-13 103.3 11.2 114 659-792 76-200 (212)
56 TIGR02726 phenyl_P_delta pheny 98.8 1.9E-08 4.2E-13 98.6 11.1 99 667-795 41-142 (169)
57 TIGR01670 YrbI-phosphatas 3-de 98.8 3.4E-08 7.5E-13 96.0 12.0 97 668-794 36-135 (154)
58 TIGR00099 Cof-subfamily Cof su 98.8 7.4E-08 1.6E-12 102.2 13.1 142 660-802 16-255 (256)
59 PRK09484 3-deoxy-D-manno-octul 98.7 7.4E-08 1.6E-12 96.5 10.7 109 667-805 55-170 (183)
60 TIGR01486 HAD-SF-IIB-MPGP mann 98.6 3.2E-07 6.9E-12 97.3 13.0 143 661-804 17-253 (256)
61 PRK03669 mannosyl-3-phosphogly 98.6 4.2E-07 9E-12 97.3 12.7 145 661-805 25-266 (271)
62 PRK13582 thrH phosphoserine ph 98.6 4.3E-07 9.3E-12 92.8 11.5 124 660-803 68-195 (205)
63 TIGR01491 HAD-SF-IB-PSPlk HAD- 98.5 4E-07 8.7E-12 92.6 10.7 118 660-788 80-200 (201)
64 COG1778 Low specificity phosph 98.5 3E-07 6.4E-12 85.6 8.1 119 667-815 42-167 (170)
65 PRK00192 mannosyl-3-phosphogly 98.5 1.2E-06 2.5E-11 93.9 12.4 67 737-804 190-267 (273)
66 KOG1615 Phosphoserine phosphat 98.4 4.3E-07 9.3E-12 87.3 7.0 105 660-776 88-199 (227)
67 PLN02954 phosphoserine phospha 98.4 4.2E-06 9E-11 86.8 13.1 125 660-802 84-222 (224)
68 TIGR03333 salvage_mtnX 2-hydro 98.3 3.5E-06 7.6E-11 86.8 11.5 134 659-804 69-209 (214)
69 TIGR02471 sucr_syn_bact_C sucr 98.3 3.7E-06 8.1E-11 88.0 11.7 69 736-805 158-233 (236)
70 PF12710 HAD: haloacid dehalog 98.2 3.3E-06 7.1E-11 85.1 8.0 92 663-767 92-192 (192)
71 COG0546 Gph Predicted phosphat 98.2 8.5E-06 1.8E-10 84.3 10.4 128 658-804 87-218 (220)
72 TIGR01485 SPP_plant-cyano sucr 98.2 1.9E-05 4.2E-10 83.3 12.6 146 658-804 19-244 (249)
73 TIGR01488 HAD-SF-IB Haloacid D 98.1 6.3E-06 1.4E-10 82.0 8.4 98 660-769 73-177 (177)
74 TIGR01490 HAD-SF-IB-hyp1 HAD-s 98.1 9.3E-06 2E-10 82.7 9.4 107 658-776 85-197 (202)
75 PRK09552 mtnX 2-hydroxy-3-keto 98.1 1.5E-05 3.2E-10 82.5 10.4 130 660-803 74-212 (219)
76 TIGR01489 DKMTPPase-SF 2,3-dik 98.1 1.4E-05 3E-10 80.2 9.6 114 659-774 71-186 (188)
77 PRK13222 phosphoglycolate phos 98.1 2.1E-05 4.5E-10 81.6 10.6 125 659-805 92-223 (226)
78 TIGR02461 osmo_MPG_phos mannos 98.0 2.1E-05 4.6E-10 81.5 10.1 43 658-700 13-55 (225)
79 PLN02382 probable sucrose-phos 97.9 9.4E-05 2E-09 83.5 13.8 140 664-804 32-257 (413)
80 TIGR02463 MPGP_rel mannosyl-3- 97.9 0.0001 2.2E-09 76.3 11.9 40 661-700 17-56 (221)
81 TIGR01454 AHBA_synth_RP 3-amin 97.8 6.4E-05 1.4E-09 76.8 9.4 122 660-803 75-203 (205)
82 PRK10187 trehalose-6-phosphate 97.8 0.00013 2.8E-09 77.7 11.5 137 660-803 36-240 (266)
83 cd01427 HAD_like Haloacid deha 97.8 4E-05 8.7E-10 71.9 6.8 114 656-770 20-133 (139)
84 PRK08238 hypothetical protein; 97.7 0.00016 3.6E-09 82.8 10.9 98 660-782 72-170 (479)
85 PRK12702 mannosyl-3-phosphogly 97.7 0.00029 6.3E-09 74.1 11.1 43 659-701 17-59 (302)
86 PRK13223 phosphoglycolate phos 97.6 0.00023 5E-09 76.1 10.1 122 659-804 100-230 (272)
87 TIGR01544 HAD-SF-IE haloacid d 97.6 0.0006 1.3E-08 71.9 12.2 134 658-803 119-273 (277)
88 PRK13288 pyrophosphatase PpaX; 97.6 0.00024 5.1E-09 73.1 9.1 122 660-803 82-210 (214)
89 TIGR01449 PGP_bact 2-phosphogl 97.6 0.00021 4.6E-09 73.3 8.7 120 660-801 85-211 (213)
90 PRK10826 2-deoxyglucose-6-phos 97.6 0.00045 9.8E-09 71.5 10.8 120 659-800 91-216 (222)
91 TIGR01484 HAD-SF-IIB HAD-super 97.6 0.00043 9.2E-09 70.6 10.3 116 660-775 17-204 (204)
92 PRK14502 bifunctional mannosyl 97.5 0.00061 1.3E-08 79.5 11.2 40 661-700 434-473 (694)
93 PRK13226 phosphoglycolate phos 97.4 0.00068 1.5E-08 70.6 9.3 125 660-805 95-226 (229)
94 PTZ00174 phosphomannomutase; P 97.4 0.0009 2E-08 70.5 10.1 53 736-790 187-244 (247)
95 TIGR01545 YfhB_g-proteo haloac 97.3 0.0012 2.6E-08 67.6 10.2 107 660-776 94-201 (210)
96 PRK13225 phosphoglycolate phos 97.3 0.0014 3E-08 70.0 10.4 119 660-803 142-267 (273)
97 PRK11590 hypothetical protein; 97.3 0.0018 3.9E-08 66.5 10.7 107 660-776 95-202 (211)
98 TIGR03351 PhnX-like phosphonat 97.2 0.0018 3.9E-08 66.8 9.5 122 659-802 86-218 (220)
99 PLN03243 haloacid dehalogenase 97.2 0.002 4.3E-08 68.3 9.9 120 660-801 109-232 (260)
100 PLN02770 haloacid dehalogenase 97.1 0.0028 6E-08 66.8 9.8 118 660-798 108-230 (248)
101 TIGR01422 phosphonatase phosph 97.0 0.0029 6.2E-08 66.9 9.8 93 660-772 99-196 (253)
102 PRK14501 putative bifunctional 97.0 0.0058 1.3E-07 74.7 13.4 170 612-804 480-721 (726)
103 PRK13478 phosphonoacetaldehyde 97.0 0.0036 7.8E-08 66.8 10.1 122 660-803 101-254 (267)
104 TIGR01548 HAD-SF-IA-hyp1 haloa 96.9 0.0016 3.4E-08 66.1 6.5 94 658-769 104-197 (197)
105 COG4030 Uncharacterized protei 96.9 0.0053 1.1E-07 60.9 9.6 142 660-805 83-263 (315)
106 TIGR01672 AphA HAD superfamily 96.9 0.0023 5E-08 66.4 7.5 88 661-772 115-206 (237)
107 PF05116 S6PP: Sucrose-6F-phos 96.9 0.0023 4.9E-08 67.4 7.3 46 736-782 164-212 (247)
108 PRK06698 bifunctional 5'-methy 96.8 0.0069 1.5E-07 69.9 10.8 123 660-804 330-454 (459)
109 PRK11587 putative phosphatase; 96.7 0.0067 1.4E-07 62.6 9.4 111 660-792 83-198 (218)
110 TIGR01662 HAD-SF-IIIA HAD-supe 96.7 0.012 2.6E-07 55.3 10.0 90 659-772 24-126 (132)
111 smart00775 LNS2 LNS2 domain. T 96.6 0.0098 2.1E-07 57.9 8.9 103 658-772 25-141 (157)
112 PRK11009 aphA acid phosphatase 96.6 0.0054 1.2E-07 63.6 7.5 85 660-772 114-206 (237)
113 PLN02575 haloacid dehalogenase 96.6 0.01 2.2E-07 65.8 9.6 119 660-800 216-338 (381)
114 PRK06769 hypothetical protein; 96.5 0.011 2.4E-07 58.5 9.0 120 661-802 29-170 (173)
115 COG4359 Uncharacterized conser 96.4 0.0094 2E-07 57.4 7.1 105 660-774 73-183 (220)
116 TIGR01428 HAD_type_II 2-haloal 96.4 0.0088 1.9E-07 60.6 7.5 94 660-773 92-188 (198)
117 TIGR01990 bPGM beta-phosphoglu 96.3 0.0094 2E-07 59.5 7.1 91 660-772 87-180 (185)
118 PRK14988 GMP/IMP nucleotidase; 96.3 0.016 3.4E-07 60.1 8.8 94 660-773 93-189 (224)
119 PLN02580 trehalose-phosphatase 96.3 0.05 1.1E-06 60.3 12.8 64 736-804 300-374 (384)
120 PRK08942 D,D-heptose 1,7-bisph 96.2 0.028 6E-07 56.1 9.5 125 660-803 29-176 (181)
121 PHA02530 pseT polynucleotide k 96.1 0.011 2.4E-07 64.1 6.8 109 657-773 184-292 (300)
122 TIGR02009 PGMB-YQAB-SF beta-ph 96.1 0.017 3.6E-07 57.7 7.5 92 659-772 87-181 (185)
123 TIGR02253 CTE7 HAD superfamily 96.1 0.012 2.6E-07 60.7 6.6 97 660-776 94-195 (221)
124 PRK09449 dUMP phosphatase; Pro 96.0 0.027 5.9E-07 58.2 9.2 121 660-803 95-222 (224)
125 TIGR01509 HAD-SF-IA-v3 haloaci 96.0 0.017 3.6E-07 57.4 7.3 92 660-772 85-179 (183)
126 COG2179 Predicted hydrolase of 96.0 0.065 1.4E-06 51.3 10.6 109 616-771 20-132 (175)
127 TIGR01685 MDP-1 magnesium-depe 95.9 0.056 1.2E-06 53.4 10.2 114 649-775 34-155 (174)
128 TIGR02254 YjjG/YfnB HAD superf 95.9 0.017 3.6E-07 59.6 6.8 120 660-802 97-223 (224)
129 PF13419 HAD_2: Haloacid dehal 95.8 0.013 2.8E-07 57.4 5.2 95 658-772 75-172 (176)
130 TIGR00213 GmhB_yaeD D,D-heptos 95.7 0.064 1.4E-06 53.3 9.8 126 661-800 27-175 (176)
131 COG3769 Predicted hydrolase (H 95.6 0.077 1.7E-06 52.9 9.5 37 664-700 27-63 (274)
132 PLN02940 riboflavin kinase 95.6 0.032 7E-07 62.6 8.0 118 660-799 93-216 (382)
133 TIGR01656 Histidinol-ppas hist 95.6 0.051 1.1E-06 52.2 8.3 90 660-773 27-141 (147)
134 TIGR01668 YqeG_hyp_ppase HAD s 95.6 0.049 1.1E-06 53.8 8.3 85 659-772 42-131 (170)
135 PLN02779 haloacid dehalogenase 95.6 0.035 7.6E-07 59.8 7.8 119 660-800 144-269 (286)
136 TIGR01533 lipo_e_P4 5'-nucleot 95.0 0.11 2.5E-06 54.8 9.5 87 658-767 116-205 (266)
137 smart00577 CPDc catalytic doma 94.9 0.032 7E-07 53.7 4.6 94 658-774 43-139 (148)
138 TIGR01459 HAD-SF-IIA-hyp4 HAD- 94.8 0.19 4.2E-06 52.6 10.5 94 653-770 17-115 (242)
139 TIGR01549 HAD-SF-IA-v1 haloaci 94.8 0.049 1.1E-06 52.5 5.6 89 660-770 64-154 (154)
140 PLN02205 alpha,alpha-trehalose 94.8 0.24 5.3E-06 61.1 12.7 70 612-697 584-654 (854)
141 TIGR01675 plant-AP plant acid 94.6 0.17 3.7E-06 52.0 9.2 88 658-763 118-209 (229)
142 TIGR02252 DREG-2 REG-2-like, H 94.6 0.072 1.6E-06 54.1 6.4 92 660-772 105-200 (203)
143 PRK05446 imidazole glycerol-ph 94.6 0.13 2.8E-06 56.7 8.7 99 659-774 29-145 (354)
144 TIGR00685 T6PP trehalose-phosp 94.5 0.066 1.4E-06 56.2 6.1 71 729-804 159-240 (244)
145 PLN02811 hydrolase 94.4 0.081 1.8E-06 54.6 6.4 97 660-773 78-180 (220)
146 PF06888 Put_Phosphatase: Puta 94.4 0.097 2.1E-06 54.1 6.8 111 660-773 71-195 (234)
147 TIGR01261 hisB_Nterm histidino 94.3 0.15 3.3E-06 49.8 7.7 94 660-774 29-144 (161)
148 PF13344 Hydrolase_6: Haloacid 94.2 0.096 2.1E-06 46.8 5.6 89 653-770 7-99 (101)
149 TIGR01686 FkbH FkbH-like domai 94.1 0.17 3.7E-06 55.4 8.6 91 660-775 31-128 (320)
150 TIGR01664 DNA-3'-Pase DNA 3'-p 93.8 0.27 5.8E-06 48.3 8.4 91 661-773 43-158 (166)
151 TIGR01681 HAD-SF-IIIC HAD-supe 93.7 0.17 3.7E-06 47.3 6.5 39 660-698 29-68 (128)
152 TIGR01691 enolase-ppase 2,3-di 93.5 0.38 8.2E-06 49.6 9.3 95 658-774 93-193 (220)
153 PLN02919 haloacid dehalogenase 93.0 0.29 6.4E-06 62.1 8.9 117 661-799 162-285 (1057)
154 PRK10563 6-phosphogluconate ph 92.6 0.11 2.4E-06 53.5 3.8 93 660-775 88-184 (221)
155 PLN03017 trehalose-phosphatase 92.4 2.1 4.6E-05 47.2 13.5 63 736-803 282-355 (366)
156 PLN02423 phosphomannomutase 92.2 0.77 1.7E-05 48.2 9.6 39 736-776 188-231 (245)
157 TIGR02247 HAD-1A3-hyp Epoxide 92.1 0.14 3E-06 52.3 3.7 89 659-772 93-191 (211)
158 PRK09456 ?-D-glucose-1-phospha 91.1 0.3 6.5E-06 49.4 5.0 94 660-773 84-181 (199)
159 PF03767 Acid_phosphat_B: HAD 90.7 0.51 1.1E-05 48.9 6.3 90 659-765 114-207 (229)
160 PF09419 PGP_phosphatase: Mito 90.5 0.93 2E-05 44.3 7.4 82 658-765 57-152 (168)
161 PHA02597 30.2 hypothetical pro 90.3 0.99 2.1E-05 45.5 7.9 94 660-773 74-170 (197)
162 KOG3120 Predicted haloacid deh 90.2 0.45 9.7E-06 47.7 4.9 121 660-782 84-215 (256)
163 PRK10725 fructose-1-P/6-phosph 89.4 0.62 1.3E-05 46.4 5.5 89 662-772 90-181 (188)
164 PLN02645 phosphoglycolate phos 88.7 0.91 2E-05 49.5 6.7 49 653-701 37-88 (311)
165 PF08235 LNS2: LNS2 (Lipin/Ned 88.5 1.6 3.5E-05 42.0 7.3 108 654-772 22-141 (157)
166 TIGR01993 Pyr-5-nucltdase pyri 88.3 0.8 1.7E-05 45.6 5.4 92 660-773 84-181 (184)
167 TIGR01452 PGP_euk phosphoglyco 86.5 7.5 0.00016 41.6 12.0 49 653-701 11-62 (279)
168 COG0637 Predicted phosphatase/ 86.4 1.5 3.2E-05 45.3 6.2 99 658-773 84-182 (221)
169 TIGR01457 HAD-SF-IIA-hyp2 HAD- 86.2 3.7 8.1E-05 43.2 9.3 50 653-702 10-62 (249)
170 TIGR01680 Veg_Stor_Prot vegeta 85.3 3.4 7.5E-05 43.5 8.2 87 658-763 143-235 (275)
171 TIGR01458 HAD-SF-IIA-hyp3 HAD- 84.6 2.2 4.9E-05 45.1 6.7 49 653-701 10-65 (257)
172 TIGR01684 viral_ppase viral ph 84.5 1.8 3.9E-05 46.0 5.7 52 661-712 146-198 (301)
173 PRK10444 UMP phosphatase; Prov 84.4 2.6 5.6E-05 44.3 7.0 49 653-701 10-61 (248)
174 PLN02177 glycerol-3-phosphate 81.7 6.1 0.00013 45.8 9.2 118 661-797 111-238 (497)
175 PRK10748 flavin mononucleotide 81.6 2.6 5.7E-05 43.9 5.8 91 660-776 113-207 (238)
176 TIGR01106 ATPase-IIC_X-K sodiu 81.5 30 0.00065 44.2 16.0 197 209-428 116-326 (997)
177 TIGR01657 P-ATPase-V P-type AT 81.3 63 0.0014 41.6 18.9 20 259-278 237-256 (1054)
178 TIGR01647 ATPase-IIIA_H plasma 81.0 25 0.00053 43.4 14.7 159 244-430 111-270 (755)
179 PLN02151 trehalose-phosphatase 80.8 16 0.00036 40.2 11.6 64 736-804 268-342 (354)
180 PHA03398 viral phosphatase sup 80.4 3.2 6.9E-05 44.2 5.8 50 661-710 148-198 (303)
181 TIGR02251 HIF-SF_euk Dullard-l 79.3 1.7 3.6E-05 42.5 3.1 90 660-773 42-135 (162)
182 PF00403 HMA: Heavy-metal-asso 79.0 0.15 3.2E-06 40.9 -3.7 54 42-97 9-62 (62)
183 COG3700 AphA Acid phosphatase 77.8 4.9 0.00011 39.0 5.5 88 661-773 115-208 (237)
184 TIGR01689 EcbF-BcbF capsule bi 77.7 6.7 0.00015 36.5 6.4 32 659-690 23-54 (126)
185 COG0241 HisB Histidinol phosph 77.2 8.8 0.00019 38.1 7.4 96 661-772 32-144 (181)
186 TIGR01663 PNK-3'Pase polynucle 75.7 10 0.00022 44.2 8.7 40 661-700 198-249 (526)
187 TIGR01116 ATPase-IIA1_Ca sarco 75.6 61 0.0013 41.0 16.2 36 245-281 93-128 (917)
188 COG1877 OtsB Trehalose-6-phosp 74.1 15 0.00033 38.8 8.7 136 652-788 32-239 (266)
189 PF05822 UMPH-1: Pyrimidine 5' 73.7 6.7 0.00015 40.8 5.8 133 659-803 89-241 (246)
190 TIGR01493 HAD-SF-IA-v2 Haloaci 72.5 2.9 6.3E-05 41.0 2.8 84 660-769 90-175 (175)
191 PF02358 Trehalose_PPase: Treh 69.8 6.5 0.00014 40.9 4.8 64 729-793 157-233 (235)
192 PRK10517 magnesium-transportin 69.6 1.3E+02 0.0029 37.9 17.0 156 245-426 185-351 (902)
193 PF00389 2-Hacid_dh: D-isomer 69.1 83 0.0018 29.2 11.8 118 657-817 3-123 (133)
194 TIGR01524 ATPase-IIIB_Mg magne 65.4 97 0.0021 39.0 14.6 158 245-428 151-318 (867)
195 TIGR02244 HAD-IG-Ncltidse HAD 65.2 11 0.00023 41.5 5.5 106 662-771 186-317 (343)
196 PRK15122 magnesium-transportin 65.0 1.4E+02 0.003 37.8 15.9 159 245-429 174-352 (903)
197 TIGR01522 ATPase-IIA2_Ca golgi 64.3 1.6E+02 0.0034 37.2 16.3 164 245-430 137-308 (884)
198 KOG3040 Predicted sugar phosph 62.2 16 0.00034 36.7 5.4 52 650-701 13-67 (262)
199 PF12689 Acid_PPase: Acid Phos 62.0 32 0.00069 33.8 7.6 94 660-768 45-142 (169)
200 TIGR01460 HAD-SF-IIA Haloacid 60.7 40 0.00087 35.0 8.7 49 653-701 7-59 (236)
201 PTZ00445 p36-lilke protein; Pr 60.2 90 0.0019 31.8 10.4 137 610-771 29-199 (219)
202 PF00122 E1-E2_ATPase: E1-E2 A 59.2 92 0.002 31.9 11.1 193 210-432 2-212 (230)
203 COG1011 Predicted hydrolase (H 58.9 34 0.00074 34.9 7.8 120 660-803 99-226 (229)
204 TIGR01458 HAD-SF-IIA-hyp3 HAD- 58.7 45 0.00098 35.1 8.8 120 662-802 122-253 (257)
205 PF06506 PrpR_N: Propionate ca 48.3 53 0.0011 32.4 6.8 107 664-815 65-172 (176)
206 COG0647 NagD Predicted sugar p 47.5 21 0.00045 37.9 3.9 45 652-696 16-60 (269)
207 PF13242 Hydrolase_like: HAD-h 46.1 35 0.00076 28.2 4.4 42 751-792 22-70 (75)
208 PRK14189 bifunctional 5,10-met 45.0 1.8E+02 0.0039 31.2 10.5 166 604-793 11-208 (285)
209 PRK14179 bifunctional 5,10-met 45.0 1.9E+02 0.0041 31.0 10.6 165 604-792 10-207 (284)
210 PF03120 DNA_ligase_OB: NAD-de 42.7 13 0.00028 31.7 1.2 20 253-272 47-67 (82)
211 PRK14194 bifunctional 5,10-met 42.0 2.3E+02 0.005 30.7 10.7 165 604-792 12-208 (301)
212 PRK01122 potassium-transportin 41.6 7.4E+02 0.016 30.2 17.8 32 261-292 115-147 (679)
213 COG0474 MgtA Cation transport 41.3 5E+02 0.011 33.0 15.3 203 207-430 113-332 (917)
214 TIGR01456 CECR5 HAD-superfamil 40.7 82 0.0018 34.4 7.5 49 653-701 9-65 (321)
215 PF13380 CoA_binding_2: CoA bi 37.6 38 0.00083 30.9 3.6 39 662-700 65-104 (116)
216 TIGR02250 FCP1_euk FCP1-like p 37.6 53 0.0012 31.8 4.8 41 659-700 57-97 (156)
217 PRK14170 bifunctional 5,10-met 37.5 88 0.0019 33.5 6.7 45 657-701 10-63 (284)
218 TIGR01494 ATPase_P-type ATPase 36.4 2.4E+02 0.0052 32.9 10.9 172 244-444 53-230 (499)
219 PF15584 Imm44: Immunity prote 35.9 17 0.00036 31.4 0.8 20 258-277 13-32 (94)
220 PRK14188 bifunctional 5,10-met 35.5 3.3E+02 0.0072 29.4 10.8 165 604-792 10-207 (296)
221 PF12710 HAD: haloacid dehalog 34.3 20 0.00043 35.4 1.3 13 453-465 1-13 (192)
222 COG0272 Lig NAD-dependent DNA 34.1 78 0.0017 37.7 6.1 74 253-337 365-440 (667)
223 TIGR00216 ispH_lytB (E)-4-hydr 33.6 3.1E+02 0.0066 29.4 10.0 174 576-781 69-266 (280)
224 TIGR01517 ATPase-IIB_Ca plasma 32.6 9.9E+02 0.021 30.5 16.2 176 244-430 185-360 (941)
225 PF01455 HupF_HypC: HupF/HypC 32.5 1E+02 0.0022 25.2 4.9 32 237-268 16-50 (68)
226 PRK14166 bifunctional 5,10-met 31.1 3.5E+02 0.0076 29.0 10.0 165 604-792 9-206 (282)
227 cd00860 ThrRS_anticodon ThrRS 30.1 94 0.002 26.3 4.7 47 654-700 6-53 (91)
228 PRK13111 trpA tryptophan synth 29.3 7E+02 0.015 26.3 13.3 81 662-763 128-212 (258)
229 PRK14174 bifunctional 5,10-met 28.7 4.4E+02 0.0095 28.5 10.3 165 604-793 9-213 (295)
230 COG2608 CopZ Copper chaperone 28.7 4.8 0.0001 33.3 -3.5 55 44-100 15-69 (71)
231 PRK11507 ribosome-associated p 28.6 66 0.0014 26.6 3.1 26 241-266 38-63 (70)
232 PRK14169 bifunctional 5,10-met 28.4 5.1E+02 0.011 27.7 10.6 56 604-683 9-66 (282)
233 CHL00200 trpA tryptophan synth 28.3 3.4E+02 0.0074 28.7 9.4 90 657-767 125-218 (263)
234 cd05017 SIS_PGI_PMI_1 The memb 28.3 94 0.002 28.2 4.6 38 660-699 54-91 (119)
235 PRK01045 ispH 4-hydroxy-3-meth 27.9 3.6E+02 0.0079 29.1 9.5 174 576-781 69-268 (298)
236 TIGR00486 YbgI_SA1388 dinuclea 27.8 6.5E+02 0.014 26.3 11.4 105 666-794 81-196 (249)
237 TIGR00381 cdhD CO dehydrogenas 27.8 2.3E+02 0.005 31.6 8.1 138 665-816 145-297 (389)
238 PRK14167 bifunctional 5,10-met 27.7 4.6E+02 0.0099 28.3 10.2 164 604-792 10-210 (297)
239 PRK14182 bifunctional 5,10-met 25.5 5.3E+02 0.011 27.6 10.1 56 604-683 9-66 (282)
240 TIGR01523 ATPase-IID_K-Na pota 25.5 2.2E+02 0.0048 36.6 8.7 41 245-286 138-178 (1053)
241 PRK14176 bifunctional 5,10-met 25.3 5.6E+02 0.012 27.5 10.2 71 604-698 16-92 (287)
242 COG0078 ArgF Ornithine carbamo 25.3 2.9E+02 0.0064 29.8 8.0 84 663-774 90-179 (310)
243 TIGR01452 PGP_euk phosphoglyco 25.3 2.7E+02 0.0059 29.5 8.2 22 751-772 220-242 (279)
244 PRK14184 bifunctional 5,10-met 25.2 6.1E+02 0.013 27.2 10.5 164 604-792 9-210 (286)
245 PRK14178 bifunctional 5,10-met 25.0 5.4E+02 0.012 27.5 10.1 128 665-793 44-202 (279)
246 PRK14177 bifunctional 5,10-met 24.1 7.1E+02 0.015 26.7 10.7 73 604-699 11-88 (284)
247 PRK14172 bifunctional 5,10-met 24.0 5.8E+02 0.013 27.3 10.1 167 604-793 10-208 (278)
248 PRK00652 lpxK tetraacyldisacch 23.4 1.8E+02 0.0039 31.9 6.4 58 740-798 70-154 (325)
249 TIGR01459 HAD-SF-IIA-hyp4 HAD- 23.2 52 0.0011 34.2 2.1 93 662-773 140-237 (242)
250 PRK14190 bifunctional 5,10-met 22.8 6.3E+02 0.014 27.1 10.1 55 604-682 11-67 (284)
251 PRK15424 propionate catabolism 22.7 5.6E+02 0.012 30.2 10.6 77 664-769 95-172 (538)
252 COG3329 Predicted permease [Ge 22.6 4.2E+02 0.009 28.5 8.3 68 138-205 182-249 (372)
253 PF12304 BCLP: Beta-casein lik 22.1 6E+02 0.013 25.2 8.8 90 330-433 23-112 (188)
254 PLN02591 tryptophan synthase 21.9 4.1E+02 0.009 27.9 8.5 93 662-776 117-218 (250)
255 PF00875 DNA_photolyase: DNA p 21.8 2.9E+02 0.0064 26.6 7.0 35 667-701 57-91 (165)
256 PF09926 DUF2158: Uncharacteri 21.7 58 0.0013 25.3 1.5 12 257-268 2-13 (53)
257 PRK14010 potassium-transportin 21.5 1.1E+03 0.024 28.8 12.9 88 604-700 438-527 (673)
258 COG2503 Predicted secreted aci 21.4 5.3E+02 0.012 26.9 8.6 87 660-769 122-212 (274)
259 TIGR00612 ispG_gcpE 1-hydroxy- 21.4 2.5E+02 0.0055 30.7 6.7 92 666-776 213-315 (346)
260 COG1832 Predicted CoA-binding 21.4 1.5E+02 0.0032 28.0 4.3 36 649-684 16-51 (140)
261 smart00306 HintN Hint (Hedgeho 21.1 1.2E+02 0.0025 26.2 3.7 28 238-265 72-99 (100)
262 PF05240 APOBEC_C: APOBEC-like 20.8 97 0.0021 24.3 2.6 24 663-686 2-25 (55)
263 TIGR02329 propionate_PrpR prop 20.8 7.3E+02 0.016 29.2 11.1 105 664-814 85-190 (526)
264 PF13275 S4_2: S4 domain; PDB: 20.7 53 0.0012 26.7 1.2 23 242-264 35-57 (65)
265 PRK13125 trpA tryptophan synth 20.6 5.4E+02 0.012 26.8 9.1 96 655-779 105-216 (244)
266 TIGR00640 acid_CoA_mut_C methy 20.6 7E+02 0.015 23.3 10.7 104 650-782 5-116 (132)
267 PF03129 HGTP_anticodon: Antic 20.4 1.6E+02 0.0034 25.2 4.3 48 653-700 3-54 (94)
268 PRK14191 bifunctional 5,10-met 20.3 8.6E+02 0.019 26.1 10.5 165 604-793 9-207 (285)
269 cd00859 HisRS_anticodon HisRS 20.2 1.6E+02 0.0035 24.4 4.3 47 654-700 6-53 (91)
270 PRK14193 bifunctional 5,10-met 20.1 7.1E+02 0.015 26.7 9.8 55 604-682 11-67 (284)
271 PRK14171 bifunctional 5,10-met 20.1 8.1E+02 0.018 26.3 10.2 56 604-683 10-68 (288)
No 1
>KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.3e-188 Score=1550.76 Aligned_cols=814 Identities=60% Similarity=0.910 Sum_probs=766.9
Q ss_pred cccccCCCCCCCCCcHHHHHHHHHhhcccccccccchhhhccchhhhHHHHHhhhhhhhhHhHhhhhhhhhhhcccCCCC
Q 003189 4 YLNENFSDVKAKNTSEEALQRWRKLCGFVKNRKRRFRFTANLSKRFEAEAIRRSNQEKFRVAVLVSQAALQFIHGLNLSS 83 (840)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~r~f~~~~~~~~~~e~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 83 (840)
++.++|. .+.+|++.++++|||.|. .++|++|||||..++++..+....++ +.|+...+.+|+..|.++. +.+
T Consensus 2 ~~~~~~~-~~~~n~~~~~~~~~~~a~-~~~~~~~~~~~~~~l~~~~~~~~~r~----~~r~~~~~~~a~~~~~~~~-~~~ 74 (1034)
T KOG0204|consen 2 LLDKDFV-VSMKNSSIEALQRWRLAY-IVLEASRRFRFGASLKKLRELMEPRR----KIRSAVLVSKAAALFIDAG-SRT 74 (1034)
T ss_pred Ccccccc-cccccchhhhhhhhhhhh-hhcccchhhccccCHHHHHHHHHHHh----hhhhhhcccchhhhhhccc-ccc
Confidence 4556776 888999999999999888 99999999999999988876555444 8899999999999998874 333
Q ss_pred ccccccccccCCcccChhhhhhhhccCChhHHHHhcCHHHHHHHhCCCcCCCCCccHHHHHHHHHhcCCCCCCCCCCccH
Q 003189 84 EYTVPEEVAASGFQICPDELGSIVEGHDIKKLKVHGGVEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGF 163 (840)
Q Consensus 84 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~gv~~l~~~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~~f 163 (840)
++.+ ++.++++.++.+.++.+.|+++||++||++.|+||+..||+.+++++.+|++.||+|.+|++++++|
T Consensus 75 e~~~---------~i~~e~l~~i~~~~~~~~L~~~gGv~gL~~~LKt~~~~Gi~~~~~el~~Rr~~fG~N~~p~k~~K~F 145 (1034)
T KOG0204|consen 75 EYTL---------GIGAEELVKIVKEHDLKALNAYGGVEGLCKKLKTDPNEGISGEDDELERRRKIFGSNTYPEKPPKGF 145 (1034)
T ss_pred cccc---------ccCHHHHHHHhhccchhhhhhccCHHHHHHHhccCcccCCCCChHHHHHHHHhcCCCCCCCCCCccH
Confidence 2222 6788999999999999999999999999999999999999998888999999999999999999999
Q ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHhhhcccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHhHhHhhhcCceEEEE
Q 003189 164 WVYVWEALHDMTLMILAVCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVA 243 (840)
Q Consensus 164 ~~~~~~~l~~~~~~il~i~a~is~~~~~~~~~~~~~~~d~~~i~~~illv~~v~~~~~~~~~~~~~~l~~~~~~~~v~V~ 243 (840)
|+++|++++|.+++||.+||++|+++++++++++++||||++|+++++++++++|+++|+|++||++|+++..+.+++|+
T Consensus 146 l~fvweA~qD~TLiIL~vaAvvSl~lgi~~~g~~~GW~eG~aI~~sV~~VV~VtA~nDy~qe~QF~~L~~~k~~~k~~Vi 225 (1034)
T KOG0204|consen 146 LRFVWEALQDVTLIILMVAAVVSLGLGIYTPGIEDGWIEGVAILLSVILVVLVTAVNDYRQELQFRKLQKEKRNIKFQVI 225 (1034)
T ss_pred HHHHHHHhccchHHHHHHHHHHHHhhhhccCCCCcccccchhheeeEEEEEEEeecchhHHhhhhhhhhhhhhceEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ECCeEEEEeccCCCCCcEEEecCCCcccccEEEEeecceEEecccccCCCCccccCC-CCCeEEeccEEeeceEEEEEEE
Q 003189 244 RNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNA-LNPFLLSGTKVQNGSCKMLVTT 322 (840)
Q Consensus 244 RdG~~~~I~~~dLvvGDIV~l~~Gd~VPaDgvll~g~~l~VDES~LTGES~pv~k~~-~~~~l~sGt~v~~G~~~~~V~~ 322 (840)
|||++++|++.|||||||+.|+.||+|||||++++|++|.+|||+|||||++++|+. .+|||+|||++.+|+++|+||+
T Consensus 226 R~G~r~~isI~diVVGDIv~lk~GDqvPADGvli~gn~L~iDESSlTGESd~v~k~~~~dPfLlSGTkv~eGsgkMlVTa 305 (1034)
T KOG0204|consen 226 RGGRRQQISIYDLVVGDIVQLKIGDQVPADGVLIQGNSLKIDESSLTGESDHVQKSLDKDPFLLSGTKVMEGSGKMLVTA 305 (1034)
T ss_pred ECCEEEEEEEeeeeeccEEEeecCCccccceEEEeccceeEecccccCCCcceeccCCCCCeEeecceeecCcceEEEEE
Confidence 999999999999999999999999999999999999999999999999999999986 8999999999999999999999
Q ss_pred EcccchHHHHHHhhcCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhcccCCCc--cccCCcChHHHHHH
Q 003189 323 VGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTH--WTWSGDDALEILEF 400 (840)
Q Consensus 323 vG~~T~~g~i~~~~~~~~~~~tplq~~l~~~a~~~~~~~l~~a~~~~~v~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 400 (840)
||+||+||++|.++....+++||||.+|+++|..|+++++++|+++|++++++|+......+.. +.|.......++++
T Consensus 306 VGmnt~wG~~m~~l~~~~~e~tpLQ~kL~~lA~~Igk~Gl~~A~~~~~VL~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~ 385 (1034)
T KOG0204|consen 306 VGMNTQWGIIMTLLGAGGEEETPLQVKLNGLATQIGKIGLLFAALTFIVLVIRFFIGKTKIEGGTGTTWSDEYIQEFVKF 385 (1034)
T ss_pred eeecchHhhHHHhhhcCCCcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeeecCCCCCccccHHHHHHHHHH
Confidence 9999999999999999998999999999999999999999999999999999999877655433 56666667889999
Q ss_pred HHHHHHHHHHhcCCchHHHHHHHHHHHHHHHhccccccccchhhhccCCeeEEEecccCccccCceEEEEEEEcCeeeee
Q 003189 401 FAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEV 480 (840)
Q Consensus 401 ~~~ai~ilvva~P~~Lplav~l~l~~~~~~l~~~~ilvr~~~a~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~ 480 (840)
|.++++++|+|+|||||||||++|||+++|||++++|||+++||||||++++||+|||||||+|+|+|++.|++++.++.
T Consensus 386 f~i~VTilVVAVPEGLPLAVTLsLAys~kkMmkD~~LVRhL~ACETMGsAT~ICsDKTGTLT~N~MtVV~~~~~~~~~k~ 465 (1034)
T KOG0204|consen 386 FIIAVTILVVAVPEGLPLAVTLSLAYSMKKMMKDNNLVRHLDACETMGSATAICSDKTGTLTTNRMTVVQSYIGSEHYKV 465 (1034)
T ss_pred hhheeEEEEEECCCCccHHHHHHHHHHHHHHhcchhHHHHhHHHhhcCCceEEEecCcCceEeeeEEEEeeeeccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999887653
Q ss_pred cCCCCCCCCCCCCChhHHHHHHHHHHhcCCceEEecCCC--ceeEcCChhhHHHHHHHHHcCCChHHHhhccceEEEecC
Q 003189 481 DNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGN--KTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPF 558 (840)
Q Consensus 481 ~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~--~~~~~g~p~e~All~~~~~~~~~~~~~~~~~~i~~~~pF 558 (840)
+.. . .+.+++...+++.++++.|+++.+..++.+ .++++|+|||+|||.|+..+|+++++.|...++++++||
T Consensus 466 ~~~----~-~~~l~~~~~~ll~~gI~~Nt~g~v~~~~~~g~~~~~~GspTE~AlL~f~~~LG~~~~~~R~e~~v~kv~~F 540 (1034)
T KOG0204|consen 466 NSP----K-SSNLPPSLLDLLLQGIAQNTTGSVVKPEKGGEQPEQLGSPTECALLGFGLKLGMDFQDVRPEEKVVKVYPF 540 (1034)
T ss_pred cCc----c-cccCCHHHHHHHHHHHhhcCCCeEEecCCCCcCccccCCHHHHHHHHHHHHhCcchHhhcchhheeEEecc
Confidence 322 1 257899999999999999999999987665 889999999999999999999999999999999999999
Q ss_pred CCCCceEEEEEEeCCCc-EEEEEcCchHHHHHhcccccccCCceeeCCHHHHHHHHHHHHHHHHcccceeEEEEEEcCCC
Q 003189 559 NSVKKQMGVVIELPEGG-FRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNE 637 (840)
Q Consensus 559 ~s~~k~~~vv~~~~~~~-~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~glr~l~~A~~~~~~~ 637 (840)
||.||+|+++++.++++ | +|||||+|+||++|++|++.+|+..+++++.+..+++.|+.||++||||+|+|||++...
T Consensus 541 NS~kK~~gvvi~~~~~~~y-~~~KGAsEiVL~~C~~~~~~~g~~~~~~e~~~~~~~~~Ie~mA~~~LRti~lAy~df~~~ 619 (1034)
T KOG0204|consen 541 NSVKKRMGVVIKLPDGGHY-VHWKGASEIVLKSCEYYIDSNGELVPFNEDDRKSFKDVIEPMASEGLRTICLAYRDFVAG 619 (1034)
T ss_pred CcccceeeEEEEcCCCCeE-EEEcChHHHHHHhhhheECCCCCEeeCCHHHHHHHHHHHHHHHHhhhheeeEEeeccccC
Confidence 99999999999988877 6 999999999999999999999999999999999999999999999999999999996433
Q ss_pred ----CC-CCCCCCCCceeeeeeecccCCCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCC--ccccCh
Q 003189 638 ----FS-ADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNG--IAIEGP 710 (840)
Q Consensus 638 ----~~-~~~~~~~~~~~~lg~~~~~D~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~--~~~~g~ 710 (840)
++ +.++.++.+++++|++|++||+|||+++||+.|++|||+|+|+||||..||++||.+|||.++++ ++++|+
T Consensus 620 ~~~~~~~~~~~~~~~~lt~laivGIkDPvRPgV~~AV~~Cq~AGItVRMVTGDNI~TAkAIA~eCGILt~~~d~~~lEG~ 699 (1034)
T KOG0204|consen 620 PDEEPSWDNEELPEGGLTLLAIVGIKDPVRPGVPEAVQLCQRAGITVRMVTGDNINTAKAIARECGILTPGGDFLALEGK 699 (1034)
T ss_pred CCCCCCccccccCCCCeEEEEEeeccCCCCCCcHHHHHHHHHcCcEEEEEeCCcHHHHHHHHHHcccccCCCccceecch
Confidence 22 22356789999999999999999999999999999999999999999999999999999999887 999999
Q ss_pred hhhcCCHHHHhhhcCCceEEEecCcccHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEEecCCCcHHHHhhcCEE
Q 003189 711 EFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVI 790 (840)
Q Consensus 711 ~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~~V~~l~~~~g~~v~~~GDG~ND~~al~~Advgiamg~~g~~~ak~~aDiv 790 (840)
+|++++++++++++|+++|+||++|.||+.+|+.|+++ ||+||+||||+||+|||++||||+|||++|||+|||+||||
T Consensus 700 eFr~~s~ee~~~i~pkl~VlARSSP~DK~lLVk~L~~~-g~VVAVTGDGTNDaPALkeADVGlAMGIaGTeVAKEaSDII 778 (1034)
T KOG0204|consen 700 EFRELSQEERDKIWPKLRVLARSSPNDKHLLVKGLIKQ-GEVVAVTGDGTNDAPALKEADVGLAMGIAGTEVAKEASDII 778 (1034)
T ss_pred hhhhcCHHHHHhhhhhheeeecCCCchHHHHHHHHHhc-CcEEEEecCCCCCchhhhhcccchhccccchhhhhhhCCeE
Confidence 99999999999999999999999999999999999988 99999999999999999999999999999999999999999
Q ss_pred eccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCC
Q 003189 791 ILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTGK 840 (840)
Q Consensus 791 lldd~f~~i~~~i~~gR~~~~~i~k~i~f~l~~N~~~l~~~~~~~~~~g~ 840 (840)
|+||||++|+++++|||++|+||+||+|||||+|++|++++|++||.+|+
T Consensus 779 i~DDNFssIVk~v~WGR~VY~nIqKFiQFQLTVNVvAliv~fv~A~~~~d 828 (1034)
T KOG0204|consen 779 ILDDNFSSIVKAVKWGRNVYDNIQKFLQFQLTVNVVALIVNFVSACATGD 828 (1034)
T ss_pred EEcCchHHHHHHHHhhhHHHHHHHHhheeEEEEEEEeehhhhhhhhhcCC
Confidence 99999999999999999999999999999999999999999999999985
No 2
>KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.3e-133 Score=1111.14 Aligned_cols=699 Identities=36% Similarity=0.559 Sum_probs=612.1
Q ss_pred CHHHHHHHhCCCcCCCCCccHHHHHHHHHhcCCCCCCCCCCccHHHHHHHHHhhhHHHHHHHHHHHHHHhhhcccCCCCC
Q 003189 120 GVEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCALVSLVVGIATEGWPKG 199 (840)
Q Consensus 120 gv~~l~~~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~~f~~~~~~~l~~~~~~il~i~a~is~~~~~~~~~~~~~ 199 (840)
.++..+..|.|++++||+.++ +.+|++.||+|+++...+.|+|+.+++||.|+.+.+|+++|++|++++.
T Consensus 8 ~v~e~~~~f~t~~~~GLt~~e--v~~r~~~yG~Nel~~ee~~~~wk~vLeQF~n~Li~iLL~sA~ISfvl~~-------- 77 (972)
T KOG0202|consen 8 SVSEVLAEFGTDLEEGLTSDE--VTRRRKKYGENELPAEEGESLWKLVLEQFDNPLILILLLSAAISFVLAD-------- 77 (972)
T ss_pred cHHHHHHHhCcCcccCCCHHH--HHHHHHhcCCccCccccCCcHHHHHHHHHHhHHHHHHHHHHHHHHHHHh--------
Confidence 578889999999999999987 9999999999999999999999999999999999999999999999874
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHhHhHhhhcCceEEEEECCeEEEEeccCCCCCcEEEecCCCcccccEEEEee
Q 003189 200 AHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSG 279 (840)
Q Consensus 200 ~~d~~~i~~~illv~~v~~~~~~~~~~~~~~l~~~~~~~~v~V~RdG~~~~I~~~dLvvGDIV~l~~Gd~VPaDgvll~g 279 (840)
|.|+++|.+++++++.+..+++|+.++..+.|.+ +.+..++|+|+|+.+.++++||||||||.|+.||+||||.++++.
T Consensus 78 ~~e~~vI~liiv~nvtVG~~QEy~aEkalEaLk~-l~p~~~~V~R~gk~~~i~A~eLVPGDiV~l~vGDkVPADlRl~e~ 156 (972)
T KOG0202|consen 78 FDEPFVITLIIVINVTVGFVQEYNAEKALEALKE-LVPPMAHVLRSGKLQHILARELVPGDIVELKVGDKIPADLRLIEA 156 (972)
T ss_pred cccceeeeeeeeeeeeeeeeeehhhHHHHHHHHh-cCCccceEEecCcccceehhccCCCCEEEEecCCccccceeEEee
Confidence 5689999999999999999999999999999987 456699999999999999999999999999999999999999999
Q ss_pred cceEEecccccCCCCccccC-------------CCCCeEEeccEEeeceEEEEEEEEcccchHHHHHHhhcCCCCCCChH
Q 003189 280 FSVLINESSLTGESEPVNVN-------------ALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPL 346 (840)
Q Consensus 280 ~~l~VDES~LTGES~pv~k~-------------~~~~~l~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~~~tpl 346 (840)
.++.||||+|||||.|+.|. ...+++|+||.|..|.++++|++||.+|++|++...+++.++++|||
T Consensus 157 ~sl~iDeS~LTGEs~pv~K~t~~v~~~~~~~~~dk~NiaFsGT~V~~G~a~GIVi~TG~nTeiG~I~~~m~~~e~~kTPL 236 (972)
T KOG0202|consen 157 KSLRIDESSLTGESEPVSKDTDAVPKDENADVQDKKNIAFSGTLVVAGRAKGIVIGTGLNTEIGKIFKMMQATESPKTPL 236 (972)
T ss_pred eeeeeecccccCCcccccccCccccCCCCCccccceeeEeecceeecCceeEEEEeccccchHHHHHHHHhccCCCCCcH
Confidence 99999999999999999994 23568999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhcccCCCccccCCcChHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHH
Q 003189 347 QVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAF 426 (840)
Q Consensus 347 q~~l~~~a~~~~~~~l~~a~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ai~ilvva~P~~Lplav~l~l~~ 426 (840)
|+++|.+...+..+..++++.+.++- ++++.... .+ +.....+..+|.+++++.|+++|||||..+|++|+.
T Consensus 237 qk~ld~~G~qLs~~is~i~v~v~~~n-ig~f~~p~-~~------g~~fk~~~~~f~IaVsLAVAAIPEGLPaVvT~tLAL 308 (972)
T KOG0202|consen 237 QKKLDEFGKQLSKVISFICVGVWLLN-IGHFLDPV-HG------GSWFKGALYYFKIAVSLAVAAIPEGLPAVVTTTLAL 308 (972)
T ss_pred HHHHHHHHHHHHHHheehhhhHHHhh-hhhhcccc-cc------ccchhchhhhhhHHHHHHHHhccCCCcchhhhhHHH
Confidence 99999999999865554444433321 12222111 11 112235778999999999999999999999999999
Q ss_pred HHHHHhccccccccchhhhccCCeeEEEecccCccccCceEEEEEEEcCeeeeec------CCCCCCC----------CC
Q 003189 427 AMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVD------NSKGTPA----------FG 490 (840)
Q Consensus 427 ~~~~l~~~~ilvr~~~a~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~------~~~~~~~----------~~ 490 (840)
+.+||+|++++||++.++|+||.+++||+|||||||+|+|++.++|+.+...... ...+.+. ..
T Consensus 309 G~~rMakknaIVRkLPsVETLGc~~VICSDKTGTLTtN~Mtv~~i~~~~~~~~~~~~f~~tg~ty~~~g~v~~~~~~~~~ 388 (972)
T KOG0202|consen 309 GTRRMAKKNAIVRKLPSVETLGCVNVICSDKTGTLTTNQMTVSKIFIPDGGTATVDEFNPTGTTYSPEGEVFKDGLYEKD 388 (972)
T ss_pred hHHHHHhhhhhhhcccchhhccceeEEecCCCCcccccceEEEEEEecccccccccccccCCceeCCCCceEecCccccc
Confidence 9999999999999999999999999999999999999999999999986543211 0000000 01
Q ss_pred CCCChhHHHHHHHHHHhcCCceEEecCCCceeEcCChhhHHHHHHHHHcCCChHH---------------HhhccceEEE
Q 003189 491 SSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQA---------------ERQASKIVKV 555 (840)
Q Consensus 491 ~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~g~p~e~All~~~~~~~~~~~~---------------~~~~~~i~~~ 555 (840)
.....+.+..+.+..+.|+.+.+..++.+.++..|.|||.||..++.+.++.-.. ..+.++...+
T Consensus 389 ~~~~~~~l~~l~~i~~lCNda~v~~~~~~~~~~~G~pTE~AL~vlaeKm~l~~~~~~~~s~~~~~~c~~~~~~~~~~~~e 468 (972)
T KOG0202|consen 389 KAGDNDLLQELAEICALCNDATVEYNDADCYEKVGEPTEGALIVLAEKMGLPGTRSTNLSNEEASACNRVYSRLFKKIAE 468 (972)
T ss_pred cccccHHHHHHHHHHHhhhhhhhhcCchhhHHhcCCchHHHHHHHHHHcCCCcchhhcccccccccchhHHHHhhhheeE
Confidence 1222334444556666666677765544566779999999999999998875422 2234456689
Q ss_pred ecCCCCCceEEEEEEeCCC--cEEEEEcCchHHHHHhcccccccCC-ceeeCCHHHHHHHHHHHHHHHHcccceeEEEEE
Q 003189 556 EPFNSVKKQMGVVIELPEG--GFRVHCKGASEIILAACDKFLNSNG-EVVPLNEAAVNHLNETIEKFASEALRTLCLACM 632 (840)
Q Consensus 556 ~pF~s~~k~~~vv~~~~~~--~~~~~~KGa~e~il~~c~~~~~~~g-~~~~l~~~~~~~~~~~~~~~~~~glr~l~~A~~ 632 (840)
+||+|+||+|+|.+..+.+ ++.+|+|||+|.|+++|++++..+| ...||++..|+.+.+...+|+++||||+++|++
T Consensus 469 lpFssdrK~Msv~c~~~~~~~~~~~fvKGA~E~Vl~rcs~~~~~~g~~~~pLt~~~re~il~~~~~~g~~gLRvLalA~~ 548 (972)
T KOG0202|consen 469 LPFSSDRKSMSVKCSPAHGQSGYKMFVKGAPESVLERCSTYYGSDGQTKVPLTQASRETILANVYEMGSEGLRVLALASK 548 (972)
T ss_pred eecccccceEEEEEecCCCCccceEEecCChHHHHHhhhcEEccCCceeeeCcHHHHHHHHHHHHHHhhccceEEEEEcc
Confidence 9999999999999986544 5899999999999999998887776 559999999999999999999999999999999
Q ss_pred EcCC-C-------CCCCCCCCCCceeeeeeecccCCCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCC
Q 003189 633 EIGN-E-------FSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNG 704 (840)
Q Consensus 633 ~~~~-~-------~~~~~~~~~~~~~~lg~~~~~D~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~ 704 (840)
+.+. . .+..+...|++|+|+|++|+.||||++++++|+.|+++||+|+|+|||+..||.+||+++||...+.
T Consensus 549 ~~~~~~~~~~~l~~~s~~~~~E~~LtFvGlVGi~DPPR~ev~~ai~~c~~aGIrV~mITGD~~~TA~AI~r~iGi~~~~e 628 (972)
T KOG0202|consen 549 DSPGQVPDDQDLNDTSNRATAESDLTFVGLVGILDPPRPEVADAIELCRQAGIRVIMITGDNKETAEAIAREIGIFSEDE 628 (972)
T ss_pred CCcccChhhhhhcccccccccccceEEEEEeeccCCCchhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHhCCCcCCc
Confidence 7763 1 1223455689999999999999999999999999999999999999999999999999999987765
Q ss_pred ----ccccChhhhcCCHHHHhhhcCCceEEEecCcccHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEEecCCCc
Q 003189 705 ----IAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGT 780 (840)
Q Consensus 705 ----~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~~V~~l~~~~g~~v~~~GDG~ND~~al~~Advgiamg~~g~ 780 (840)
.+++|++|+.++++++.+.+.+..||+|++|++|.++|++||++ |++|||||||+||+||||.||||||||++||
T Consensus 629 d~~~~~~TG~efD~ls~~~~~~~~~~~~vFaR~~P~HK~kIVeaLq~~-geivAMTGDGVNDApALK~AdIGIAMG~~GT 707 (972)
T KOG0202|consen 629 DVSSMALTGSEFDDLSDEELDDAVRRVLVFARAEPQHKLKIVEALQSR-GEVVAMTGDGVNDAPALKKADIGIAMGISGT 707 (972)
T ss_pred cccccccchhhhhcCCHHHHHHHhhcceEEEecCchhHHHHHHHHHhc-CCEEEecCCCccchhhhhhcccceeecCCcc
Confidence 89999999999999999999999999999999999999999999 9999999999999999999999999999999
Q ss_pred HHHHhhcCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 003189 781 EVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLT 838 (840)
Q Consensus 781 ~~ak~~aDivlldd~f~~i~~~i~~gR~~~~~i~k~i~f~l~~N~~~l~~~~~~~~~~ 838 (840)
|+||++||+||.||||++|+.++++||.+|+|||+|+.|+|..|+.++...|+++.+.
T Consensus 708 dVaKeAsDMVL~DDnFstIvaAVEEGr~IynNik~Fir~~lSsnVgev~~I~l~aa~~ 765 (972)
T KOG0202|consen 708 DVAKEASDMVLADDNFSTIVAAVEEGRAIYNNIKNFIRYLLSSNVGEVVLIFLTAAFG 765 (972)
T ss_pred HhhHhhhhcEEecCcHHHHHHHHHHhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhC
Confidence 9999999999999999999999999999999999999999999999999999998764
No 3
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=100.00 E-value=2.5e-125 Score=1157.26 Aligned_cols=737 Identities=51% Similarity=0.805 Sum_probs=649.5
Q ss_pred ccCCcccChhhhhhhhcc-CChhHHHHhcCHHHHHHHhCCCcCCCCCccHHHHHHHHHhcCCCCCCCCCCccHHHHHHHH
Q 003189 92 AASGFQICPDELGSIVEG-HDIKKLKVHGGVEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEA 170 (840)
Q Consensus 92 ~~~g~~~~~~~~~~~~~~-~~~~~l~~~~gv~~l~~~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~~f~~~~~~~ 170 (840)
...||.+.-.++.++.+. ++.+.|..+||++++++.|++++..||+.+++++++|+++||+|+++.+++++||++++++
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~t~~~~GLs~~~~ev~~r~~~yG~N~l~~~~~~s~~~~~~~~ 93 (941)
T TIGR01517 14 FTDGFDVGVSILTDLTDIFKRAPIYEKLGGAEGIATKLKTDLNEGVRLSSSTLERREKVYGKNELPEKPPKSFLQIVWAA 93 (941)
T ss_pred cCCCCCCCHHHHHHhcCchhhHHHHHHhCCHHHHHHHhCcCcccCCCCCHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHH
Confidence 456899999999998865 5678889999999999999999999999444459999999999999999999999999999
Q ss_pred HhhhHHHHHHHHHHHHHHhhhc-----ccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHhHhHhhhcCceEEEEEC
Q 003189 171 LHDMTLMILAVCALVSLVVGIA-----TEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARN 245 (840)
Q Consensus 171 l~~~~~~il~i~a~is~~~~~~-----~~~~~~~~~d~~~i~~~illv~~v~~~~~~~~~~~~~~l~~~~~~~~v~V~Rd 245 (840)
|+++++++|++++++++++++. .++....|+|++.|+++++++++++++.+|++++++++|++..++.+++|+||
T Consensus 94 f~~~~~~~l~~~ails~~~~~~~~~~~~~~~~~~~~~~~~il~~v~~~~~i~~~~e~~~~~~~~~l~~~~~~~~~~ViRd 173 (941)
T TIGR01517 94 LSDQTLILLSVAAVVSLVLGLPEPGEGKADTETGWIEGVAILVSVILVVLVTAVNDYKKELQFRQLNREKSAQKIAVIRG 173 (941)
T ss_pred HhCHHHHHHHHHHHHHHHHhhcccccccCccccchHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhccCCCceEEEEC
Confidence 9999999999999999998753 22334589999999999999999999999999999999987666779999999
Q ss_pred CeEEEEeccCCCCCcEEEecCCCcccccEEEEeecceEEecccccCCCCccccCCC-CCeEEeccEEeeceEEEEEEEEc
Q 003189 246 GFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNAL-NPFLLSGTKVQNGSCKMLVTTVG 324 (840)
Q Consensus 246 G~~~~I~~~dLvvGDIV~l~~Gd~VPaDgvll~g~~l~VDES~LTGES~pv~k~~~-~~~l~sGt~v~~G~~~~~V~~vG 324 (840)
|++++|+++||||||+|.|++||+|||||++++|+++.||||+|||||.|+.|..+ ++++|+||.|.+|.++++|++||
T Consensus 174 G~~~~I~~~~Lv~GDiV~l~~Gd~IPaD~~li~g~~l~VdES~LTGES~pv~K~~~~~n~v~~GT~v~~G~~~~iV~~tG 253 (941)
T TIGR01517 174 GQEQQISIHDIVVGDIVSLSTGDVVPADGVFISGLSLEIDESSITGESDPIKKGAPKDSFLLSGTVVNEGSGRMLVTAVG 253 (941)
T ss_pred CEEEEEeHHHCCCCCEEEECCCCEecccEEEEEcCcEEEEecccCCCCCcccccCCCCceEEeCCeEEeeEEEEEEEEeC
Confidence 99999999999999999999999999999999997789999999999999999854 46899999999999999999999
Q ss_pred ccchHHHHHHhhcCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhcccCCCccccCCcChHHHHHHHHHH
Q 003189 325 MRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIA 404 (840)
Q Consensus 325 ~~T~~g~i~~~~~~~~~~~tplq~~l~~~a~~~~~~~l~~a~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 404 (840)
.+|++|+|++++.++. +++|+|++++++++++.++++.+++++|+++++.++......+.. ........+...|..+
T Consensus 254 ~~T~~gki~~~~~~~~-~~t~l~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~a 330 (941)
T TIGR01517 254 VNSFGGKLMMELRAEG-EDTPLQEKLSELAGLIGKFGMGSAVLLFLVLSLRYVFRIIRGDGR--DTEEDAQTFLDHFIIA 330 (941)
T ss_pred CCcHHHHHHHhhccCC-CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccc--ccchhhHHHHHHHHHH
Confidence 9999999999998765 568999999999999999999999888888765543321111000 0001112577889999
Q ss_pred HHHHHHhcCCchHHHHHHHHHHHHHHHhccccccccchhhhccCCeeEEEecccCccccCceEEEEEEEcCeeeeecCCC
Q 003189 405 VTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSK 484 (840)
Q Consensus 405 i~ilvva~P~~Lplav~l~l~~~~~~l~~~~ilvr~~~a~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~ 484 (840)
+++++++||||||+++|+++++++++|+++|+++|+++++|+||++|+||||||||||+|+|+|.+++..+..+..+.
T Consensus 331 l~llv~~iP~~Lp~~vti~l~~~~~~mak~~ilvk~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~-- 408 (941)
T TIGR01517 331 VTIVVVAVPEGLPLAVTIALAYSMKKMMKDNNLVRHLAACETMGSATAICSDKTGTLTQNVMSVVQGYIGEQRFNVRD-- 408 (941)
T ss_pred HHHHHhhCCCchHHHHHHHHHHHHHHHHhCCCEEechHHhhhccCceEEEEcCcCceeeceEEEEEEEEecceEecCc--
Confidence 999999999999999999999999999999999999999999999999999999999999999999987655433211
Q ss_pred CCCCCCCCCChhHHHHHHHHHHhcCCceEEecCCCceeEcCChhhHHHHHHHHHcCCChHHHhhccceEEEecCCCCCce
Q 003189 485 GTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQ 564 (840)
Q Consensus 485 ~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~g~p~e~All~~~~~~~~~~~~~~~~~~i~~~~pF~s~~k~ 564 (840)
.....++...+++..++++|+......++.+.....|||+|.|+++++...+.+....+..+++++.+||+|++|+
T Consensus 409 ----~~~~~~~~~~~~l~~~~~~~s~~~~~~~~~~~~~~~g~p~e~All~~~~~~~~~~~~~~~~~~~~~~~pF~s~~k~ 484 (941)
T TIGR01517 409 ----VLRNVPKHVRNILVEGISLNSSSEEVVDRGGKRAFIGSKTECALLGFLLLLGRDYQEVRAEEKVVKIYPFNSERKF 484 (941)
T ss_pred ----ccccCCHHHHHHHHHHHHhCCCCccccCCCCccccCCCccHHHHHHHHHHcCCCHHHHHhhchhccccccCCCCCe
Confidence 1111234455666677777765543322233345689999999999998888887777777888999999999999
Q ss_pred EEEEEEeCCCcEEEEEcCchHHHHHhcccccccCCceeeCCHHHHHHHHHHHHHHHHcccceeEEEEEEcCCCCCCCCCC
Q 003189 565 MGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPI 644 (840)
Q Consensus 565 ~~vv~~~~~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~glr~l~~A~~~~~~~~~~~~~~ 644 (840)
|+++++.+++.+++++|||||.+++.|+.+++.+|...++++ .++.+++.+++|+++|+|++++||++++.+.....+.
T Consensus 485 msvv~~~~~~~~~~~~KGA~e~il~~c~~~~~~~g~~~~~~~-~~~~i~~~~~~~a~~G~Rvl~~A~~~~~~~~~~~~~~ 563 (941)
T TIGR01517 485 MSVVVKHSGGKVREFRKGASEIVLKPCRKRLDSNGEATPISD-DKDRCADVIEPLASDALRTICLAYRDFAPEEFPRKDY 563 (941)
T ss_pred EEEEEEeCCCcEEEEEECChHHHHHhhhHHhhcCCCcccCcH-HHHHHHHHHHHHHhcCCEEEEEEEEecCccccccccc
Confidence 999999877779999999999999999988777888888887 7788999999999999999999999986543322334
Q ss_pred CCCceeeeeeecccCCCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhc
Q 003189 645 PTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLI 724 (840)
Q Consensus 645 ~~~~~~~lg~~~~~D~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~ 724 (840)
.+++++|+|+++|+||+||+++++|+.|+++||+++|+|||++.||.++|++|||..++..+++|++++.++++++.+.+
T Consensus 564 ~e~~l~~lGli~~~Dplr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~iA~~~GI~~~~~~vi~G~~~~~l~~~el~~~i 643 (941)
T TIGR01517 564 PNGGLTLIGVVGIKDPLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIARNCGILTFGGLAMEGKEFRRLVYEEMDPIL 643 (941)
T ss_pred cccCcEEEEEeeccCCCchhHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCCCCceEeeHHHhhhCCHHHHHHHh
Confidence 47899999999999999999999999999999999999999999999999999999877899999999999999999999
Q ss_pred CCceEEEecCcccHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEEecCCCcHHHHhhcCEEeccCCchHHHHHHH
Q 003189 725 PKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAK 804 (840)
Q Consensus 725 ~~~~v~ar~~P~~K~~~V~~l~~~~g~~v~~~GDG~ND~~al~~Advgiamg~~g~~~ak~~aDivlldd~f~~i~~~i~ 804 (840)
++..||||++|+||+++|+.||++ |++|+|||||+||+|||++||||||||++|+|+||++||+||+||||++|+++++
T Consensus 644 ~~~~Vfar~sPe~K~~iV~~lq~~-g~vVam~GDGvNDapALk~AdVGIAmg~~gtdvAk~aADivL~dd~f~~I~~~i~ 722 (941)
T TIGR01517 644 PKLRVLARSSPLDKQLLVLMLKDM-GEVVAVTGDGTNDAPALKLADVGFSMGISGTEVAKEASDIILLDDNFASIVRAVK 722 (941)
T ss_pred ccCeEEEECCHHHHHHHHHHHHHC-CCEEEEECCCCchHHHHHhCCcceecCCCccHHHHHhCCEEEecCCHHHHHHHHH
Confidence 999999999999999999999998 9999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcC
Q 003189 805 WGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTG 839 (840)
Q Consensus 805 ~gR~~~~~i~k~i~f~l~~N~~~l~~~~~~~~~~g 839 (840)
+||++|+||+|+++|++++|+..+++++++.++.+
T Consensus 723 ~gR~~~~ni~k~i~~~l~~n~~~i~~~~~~~~~~~ 757 (941)
T TIGR01517 723 WGRNVYDNIRKFLQFQLTVNVVAVILTFVGSCISS 757 (941)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999888754
No 4
>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.
Probab=100.00 E-value=5.3e-120 Score=1108.78 Aligned_cols=688 Identities=29% Similarity=0.426 Sum_probs=594.0
Q ss_pred cCHHHHHHHhCCCcCCCCCccHHHHHHHHHhcCCCCCCCCCCccHHHHHHHHHhhhHHHHHHHHHHHHHHhhhcccCCCC
Q 003189 119 GGVEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCALVSLVVGIATEGWPK 198 (840)
Q Consensus 119 ~gv~~l~~~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~~f~~~~~~~l~~~~~~il~i~a~is~~~~~~~~~~~~ 198 (840)
..++.+.+.|++++..||++++ +++|++.||+|+++.++.+++|+.++++|+++++++|+++++++++++
T Consensus 10 ~~~~~v~~~l~t~~~~GLs~~e--a~~rl~~~G~N~l~~~~~~s~~~~~l~q~~~~~~~iL~~aails~~~~-------- 79 (1053)
T TIGR01523 10 DIADEAAEFIGTSIPEGLTHDE--AQHRLKEVGENRLEADSGIDAKAMLLHQVCNAMCMVLIIAAAISFAMH-------- 79 (1053)
T ss_pred CCHHHHHHHhCcCcccCCCHHH--HHHHHHHcCCCCCCCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHh--------
Confidence 3578889999999989999977 999999999999999999999999999999999999999999999875
Q ss_pred CcchhHHHHHHHHHHHHHHHHHHHHHHHHHhHhHhhhcCceEEEEECCeEEEEeccCCCCCcEEEecCCCcccccEEEEe
Q 003189 199 GAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVS 278 (840)
Q Consensus 199 ~~~d~~~i~~~illv~~v~~~~~~~~~~~~~~l~~~~~~~~v~V~RdG~~~~I~~~dLvvGDIV~l~~Gd~VPaDgvll~ 278 (840)
.|+|++.|++.+++..+++.+++|+.+++.++|.+. .+.+++|+|||++++|+++||||||||.|++||+|||||+|++
T Consensus 80 ~~~~~~iIl~vv~in~~i~~~QE~~aekal~aL~~l-~~~~~~ViRdg~~~~I~a~eLVpGDIv~L~~Gd~VPAD~rLi~ 158 (1053)
T TIGR01523 80 DWIEGGVISAIIALNILIGFIQEYKAEKTMDSLKNL-ASPMAHVIRNGKSDAIDSHDLVPGDICLLKTGDTIPADLRLIE 158 (1053)
T ss_pred hHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcc-CCCceEEEeCCeeeecCHhhCCCCCEEEECCCCEeeccEEEEE
Confidence 589999999999999999999999999999999975 4558999999999999999999999999999999999999999
Q ss_pred ecceEEecccccCCCCccccCCC--------------CCeEEeccEEeeceEEEEEEEEcccchHHHHHHhhcCCCC---
Q 003189 279 GFSVLINESSLTGESEPVNVNAL--------------NPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGD--- 341 (840)
Q Consensus 279 g~~l~VDES~LTGES~pv~k~~~--------------~~~l~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~--- 341 (840)
+++|.||||+|||||.||.|... .+++|+||.|.+|.++++|++||.+|++|+|.+++.+...
T Consensus 159 ~~~L~VDES~LTGES~pV~K~~~~~~~~~~~~~~~d~~n~lf~GT~V~~G~g~~vVvatG~~T~~GkIa~~~~~~~~~~~ 238 (1053)
T TIGR01523 159 TKNFDTDEALLTGESLPVIKDAHATFGKEEDTPIGDRINLAFSSSAVTKGRAKGICIATALNSEIGAIAAGLQGDGGLFQ 238 (1053)
T ss_pred eCceEEEchhhcCCCCceeccccccccccccCCcccCCCccccCceEEeeeEEEEEEEecCccHHHHHHHHHhhhhhccc
Confidence 99999999999999999999631 3579999999999999999999999999999998864321
Q ss_pred --------------------------------CCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhcccCCCcccc
Q 003189 342 --------------------------------DETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTW 389 (840)
Q Consensus 342 --------------------------------~~tplq~~l~~~a~~~~~~~l~~a~~~~~v~~~~~~~~~~~~~~~~~~ 389 (840)
.+||||+++++++.++..+++++++++|++....
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tpLq~~l~~l~~~l~~i~~~~~~~~~~~~~~~-------------- 304 (1053)
T TIGR01523 239 RPEKDDPNKRRKLNKWILKVTKKVTGAFLGLNVGTPLHRKLSKLAVILFCIAIIFAIIVMAAHKFD-------------- 304 (1053)
T ss_pred cccccccccchhhhcccccccccchhhccccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhh--------------
Confidence 2499999999999999888888877766542110
Q ss_pred CCcChHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHhccccccccchhhhccCCeeEEEecccCccccCceEEE
Q 003189 390 SGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVL 469 (840)
Q Consensus 390 ~~~~~~~~~~~~~~ai~ilvva~P~~Lplav~l~l~~~~~~l~~~~ilvr~~~a~E~lg~v~~I~~DKTGTLT~n~m~v~ 469 (840)
.+...+.++++++|+++|+|||+.+++++++++++|+++|++||+++++|+||++|+||+|||||||+|+|+|+
T Consensus 305 ------~~~~~~~~av~l~Va~VPegLp~~vti~La~g~~rMak~~~lVr~L~avEtLG~vtvICsDKTGTLT~N~M~V~ 378 (1053)
T TIGR01523 305 ------VDKEVAIYAICLAISIIPESLIAVLSITMAMGAANMSKRNVIVRKLDALEALGAVNDICSDKTGTITQGKMIAR 378 (1053)
T ss_pred ------hhHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHhcCCEeccchhhhhccCccEEEecCcCccccceEEEE
Confidence 11355677899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEcC-eeeeecCC--CCCCC------------------------C-------------CCCCChhHHHHHHHHHHhcC
Q 003189 470 KACICE-EIKEVDNS--KGTPA------------------------F-------------GSSIPASASKLLLQSIFNNT 509 (840)
Q Consensus 470 ~~~~~~-~~~~~~~~--~~~~~------------------------~-------------~~~~~~~~~~~l~~~i~~~~ 509 (840)
++|..+ ..+..+.. .+.+. . .....++....+.....+|+
T Consensus 379 ~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~lcn 458 (1053)
T TIGR01523 379 QIWIPRFGTISIDNSDDAFNPNEGNVSGIPRFSPYEYSHNEAADQDILKEFKDELKEIDLPEDIDMDLFIKLLETAALAN 458 (1053)
T ss_pred EEEEcCCceEEecCCCCCCCCcccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHhcc
Confidence 999764 12221110 00000 0 00000112233445555566
Q ss_pred CceEEec-CCCceeEcCChhhHHHHHHHHHcCCChH------HH-------------------hhccceEEEecCCCCCc
Q 003189 510 GGEVVIG-EGNKTEILGTPTETAILEFGLLLGGDFQ------AE-------------------RQASKIVKVEPFNSVKK 563 (840)
Q Consensus 510 ~~~~~~~-~~~~~~~~g~p~e~All~~~~~~~~~~~------~~-------------------~~~~~i~~~~pF~s~~k 563 (840)
.+.+..+ .++.+...|+|+|.||+.++.+.|++.. .. +..+++++.+||+|+||
T Consensus 459 ~a~~~~~~~~~~~~~~GdptE~ALl~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pFds~rK 538 (1053)
T TIGR01523 459 IATVFKDDATDCWKAHGDPTEIAIHVFAKKFDLPHNALTGEEDLLKSNENDQSSLSQHNEKPGSAQFEFIAEFPFDSEIK 538 (1053)
T ss_pred CCeeeccCCCCceeeCcCccHHHHHHHHHHcCCCcccccchhhhhhhccccccccccccccccccccceEEEeccCCCCC
Confidence 5655432 2234466899999999999988876421 11 23467899999999999
Q ss_pred eEEEEEEeCCC-cEEEEEcCchHHHHHhcccccccCC-ceeeCCHHHHHHHHHHHHHHHHcccceeEEEEEEcCCCCCC-
Q 003189 564 QMGVVIELPEG-GFRVHCKGASEIILAACDKFLNSNG-EVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSA- 640 (840)
Q Consensus 564 ~~~vv~~~~~~-~~~~~~KGa~e~il~~c~~~~~~~g-~~~~l~~~~~~~~~~~~~~~~~~glr~l~~A~~~~~~~~~~- 640 (840)
||+++++.+++ .+++|+|||||.|+++|+++...+| ...|++++.++.+.+.+++|+++|+||+++|||+++.+...
T Consensus 539 ~msvv~~~~~~~~~~~~~KGApe~il~~c~~~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~GlRvLa~A~r~l~~~~~~~ 618 (1053)
T TIGR01523 539 RMASIYEDNHGETYNIYAKGAFERIIECCSSSNGKDGVKISPLEDCDRELIIANMESLAAEGLRVLAFASKSFDKADNND 618 (1053)
T ss_pred eEEEEEEeCCCCEEEEEEeCChHHHHHhhhHhhcCCCCccccCCHHHHHHHHHHHHHHHhcCCeEEEEEEEECCchhccc
Confidence 99999986544 5889999999999999998766555 56799999999999999999999999999999998643110
Q ss_pred --------CCCCCCCceeeeeeecccCCCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccC----------
Q 003189 641 --------DAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD---------- 702 (840)
Q Consensus 641 --------~~~~~~~~~~~lg~~~~~D~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~---------- 702 (840)
..+..|++++|+|+++|+||+||+++++|+.|+++||+|+|+|||++.||.++|++|||..+
T Consensus 619 ~~~~~~~~~~~~~e~~L~~~G~~~~~Dp~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~ 698 (1053)
T TIGR01523 619 DQLKNETLNRATAESDLEFLGLIGIYDPPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGIIPPNFIHDRDEIM 698 (1053)
T ss_pred hhhhccccchhhhccCCEEEEEEeeecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCccccccccccc
Confidence 11245789999999999999999999999999999999999999999999999999999754
Q ss_pred CCccccChhhhcCCHHHHhhhcCCceEEEecCcccHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEEecCCCcHH
Q 003189 703 NGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEV 782 (840)
Q Consensus 703 ~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~~V~~l~~~~g~~v~~~GDG~ND~~al~~Advgiamg~~g~~~ 782 (840)
...+++|.++..++++++.+.+.+..||||++|+||.++|+.||++ |++|+|||||+||+|||++||||||||++|+|+
T Consensus 699 ~~~vitG~~l~~l~~~~l~~~~~~~~V~ar~sP~~K~~iV~~lq~~-g~~Vam~GDGvNDapaLk~AdVGIAmg~~gt~v 777 (1053)
T TIGR01523 699 DSMVMTGSQFDALSDEEVDDLKALCLVIARCAPQTKVKMIEALHRR-KAFCAMTGDGVNDSPSLKMANVGIAMGINGSDV 777 (1053)
T ss_pred cceeeehHHhhhcCHHHHHHHhhcCeEEEecCHHHHHHHHHHHHhc-CCeeEEeCCCcchHHHHHhCCccEecCCCccHH
Confidence 2479999999999999999999999999999999999999999999 999999999999999999999999999999999
Q ss_pred HHhhcCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 003189 783 AKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLT 838 (840)
Q Consensus 783 ak~~aDivlldd~f~~i~~~i~~gR~~~~~i~k~i~f~l~~N~~~l~~~~~~~~~~ 838 (840)
||++||++|+||||++|++++++||++|+||+|+++|.|+.|+..+++.+++.++.
T Consensus 778 ak~aADivl~dd~f~~I~~~i~~gR~~~~ni~k~i~y~l~~ni~~i~~~~~~~~~~ 833 (1053)
T TIGR01523 778 AKDASDIVLSDDNFASILNAIEEGRRMFDNIMKFVLHLLAENVAEAILLIIGLAFR 833 (1053)
T ss_pred HHHhcCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999998888773
No 5
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4e-119 Score=1091.42 Aligned_cols=678 Identities=37% Similarity=0.559 Sum_probs=601.3
Q ss_pred HHHHHhCCCcCCCCCccHHHHHHHHHhcCCCCCCCCCCccHHHHHHHHHhhhHHHHHHHHHHHHHHhhhcccCCCCCcch
Q 003189 123 GIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCALVSLVVGIATEGWPKGAHD 202 (840)
Q Consensus 123 ~l~~~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~~f~~~~~~~l~~~~~~il~i~a~is~~~~~~~~~~~~~~~d 202 (840)
.+...+.++...||+.++ +.+|+..||.|+++..+..++|..++.+|++++.++|+++++++.+++.+.... .+
T Consensus 32 ~~~~~~~~~~~~GLs~~e--~~~r~~~~G~N~~~~~~~~~~~~~fl~~f~~~~~~iL~~~a~~s~~~~~~~~~~----~~ 105 (917)
T COG0474 32 ELLLELFTSPTTGLSEEE--VKRRLKKYGPNELPEEKKRSLLKKFLRQFKDPFIILLLVAALLSAFVGDWVDAG----VD 105 (917)
T ss_pred hHHHhhcCCcccCCCHHH--HHHHHhhcCCccccccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccC----cc
Confidence 456677888899999965 999999999999999999999999999999999999999999999887532110 45
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhHhHhhhcCceEEEEECCeEEEEeccCCCCCcEEEecCCCcccccEEEEeecce
Q 003189 203 GLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSV 282 (840)
Q Consensus 203 ~~~i~~~illv~~v~~~~~~~~~~~~~~l~~~~~~~~v~V~RdG~~~~I~~~dLvvGDIV~l~~Gd~VPaDgvll~g~~l 282 (840)
...|...+++..++..+.+|+.++..+.|.+.. +..++|+|||++++|+++||||||||.|++||+||||+++++++++
T Consensus 106 ~~~I~~~i~~n~~~g~~qe~~a~~~l~~lk~~~-~~~~~V~R~g~~~~i~a~eLVpGDiV~l~~gd~vPAD~rLl~~~~l 184 (917)
T COG0474 106 AIVILLVVVINALLGFVQEYRAEKALEALKKMS-SPKAKVLRDGKFVEIPASELVPGDIVLLEAGDVVPADLRLLESSDL 184 (917)
T ss_pred eeeehHHHHHHHHHHHHHHHHHHHHHHHHHhhc-cCceEEEeCCcEEEecHHHCCCCcEEEECCCCccccceEEEEecCc
Confidence 556777777777888888888888888888755 5689999999999999999999999999999999999999999988
Q ss_pred EEecccccCCCCccccC-------------CCCCeEEeccEEeeceEEEEEEEEcccchHHHHHHhhcCCCCCCChHHHH
Q 003189 283 LINESSLTGESEPVNVN-------------ALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVK 349 (840)
Q Consensus 283 ~VDES~LTGES~pv~k~-------------~~~~~l~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~~~tplq~~ 349 (840)
.||||+|||||.|+.|. ..++++|+||.|.+|.++++|++||.+|+.|++..++......+||+|++
T Consensus 185 ~VdEs~LTGES~pv~K~~~~~~~~~~~~~~d~~n~l~sGt~V~~G~~~giVvaTG~~T~~G~ia~~~~~~~~~~t~l~~~ 264 (917)
T COG0474 185 EVDESALTGESLPVEKQALPLTKSDAPLGLDRDNMLFSGTTVVSGRAKGIVVATGFETEFGKIARLLPTKKEVKTPLQRK 264 (917)
T ss_pred eEEcccccCCCcchhccccccccccccccCCccceEEeCCEEEcceEEEEEEEEcCccHHHHHHHhhccccccCCcHHHH
Confidence 99999999999999995 34688999999999999999999999999999999999886677999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhHhhhcccCCCccccCCcChHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHH
Q 003189 350 LNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMK 429 (840)
Q Consensus 350 l~~~a~~~~~~~l~~a~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ai~ilvva~P~~Lplav~l~l~~~~~ 429 (840)
++++..++..+++++++++|++... .. + . .+...|+.++++++.++|+|||+.++++++.+++
T Consensus 265 l~~~~~~l~~~~l~~~~~~~~~~~~---~~----~-------~---~~~~~~~~~v~l~va~IPegLp~~vti~la~g~~ 327 (917)
T COG0474 265 LNKLGKFLLVLALVLGALVFVVGLF---RG----G-------N---GLLESFLTALALAVAAVPEGLPAVVTIALALGAQ 327 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH---hc----C-------c---cHHHHHHHHHHHHHhccccchHHHHHHHHHHHHH
Confidence 9999999999999888888876521 10 0 0 1568899999999999999999999999999999
Q ss_pred HHhccccccccchhhhccCCeeEEEecccCccccCceEEEEEEEcCeeeeecCCCCCCCCCCCCChhHHHHHHHHHHhcC
Q 003189 430 KMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNT 509 (840)
Q Consensus 430 ~l~~~~ilvr~~~a~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~ 509 (840)
+|.+++++||+++++|+||++++||||||||||+|+|+|.+++..+...+.+ ......++... .+...+++|+
T Consensus 328 ~mak~~~ivr~l~avE~LG~v~vICsDKTGTLTqN~M~v~~~~~~~~~~~~~------~~~~~~~~~~~-~~l~~~~lc~ 400 (917)
T COG0474 328 RMAKDNAIVRSLNAIETLGSVDVICSDKTGTLTQNKMTVKKIYINGGGKDID------DKDLKDSPALL-RFLLAAALCN 400 (917)
T ss_pred HHHhccchhhccchhhhccCccEEEecCCCCCccCeEEEEEEEeCCCccccc------ccccccchHHH-HHHHHHHhcC
Confidence 9999999999999999999999999999999999999999999985110000 00111112222 3445556666
Q ss_pred CceEEecCCCceeEcCChhhHHHHHHHHHcCC--ChHHHhhccceEEEecCCCCCceEEEEEEeCCCcEEEEEcCchHHH
Q 003189 510 GGEVVIGEGNKTEILGTPTETAILEFGLLLGG--DFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEII 587 (840)
Q Consensus 510 ~~~~~~~~~~~~~~~g~p~e~All~~~~~~~~--~~~~~~~~~~i~~~~pF~s~~k~~~vv~~~~~~~~~~~~KGa~e~i 587 (840)
+.....+ + ++..|||+|.||++++.+.|. +....+..+++++.+||+|+||||+++++.+++++.+++|||||.|
T Consensus 401 ~~~~~~~-~--~~~~gdptE~Al~~~a~~~~~~~~~~~~~~~~~~~~~~PFdS~rKrMsviv~~~~~~~~~~~KGApe~i 477 (917)
T COG0474 401 SVTPEKN-G--WYQAGDPTEGALVEFAEKLGFSLDLSGLEVEYPILAEIPFDSERKRMSVIVKTDEGKYILFVKGAPEVI 477 (917)
T ss_pred ccccccc-C--ceecCCccHHHHHHHHHhcCCcCCHHHHhhhcceeEEecCCCCceEEEEEEEcCCCcEEEEEcCChHHH
Confidence 6555444 3 677999999999999999988 7778888889999999999999999999977777999999999999
Q ss_pred HHhcccccccCCceeeCCHHHHHHHHHHHHHHHHcccceeEEEEEEcCCCCCCCC-CCCCCceeeeeeecccCCCCcchH
Q 003189 588 LAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADA-PIPTEGYTCIGIVGIKDPMRPGVK 666 (840)
Q Consensus 588 l~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~glr~l~~A~~~~~~~~~~~~-~~~~~~~~~lg~~~~~D~lR~~~~ 666 (840)
+++|+++ +...+++++.++.+++..++|+++|+|++++|||..+..+.... +..|+|++|+|+++|+||||++++
T Consensus 478 l~~~~~~----~~~~~~~~~~~~~~~~~~~~la~~glRvla~A~k~~~~~~~~~~~~~~E~dl~~lGl~g~~Dppr~~v~ 553 (917)
T COG0474 478 LERCKSI----GELEPLTEEGLRTLEEAVKELASEGLRVLAVAYKKLDRAEKDDEVDEIESDLVFLGLTGIEDPPREDVK 553 (917)
T ss_pred HHHhccc----CcccccCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcccccchhhhhhccceeehhhhccCCCCccHH
Confidence 9999976 77789999999999999999999999999999997765533222 467899999999999999999999
Q ss_pred HHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCC--CccccChhhhcCCHHHHhhhcCCceEEEecCcccHHHHHHH
Q 003189 667 ESVAICRSAGITVRMVTGDNINTAKAIARECGILTDN--GIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKH 744 (840)
Q Consensus 667 ~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~--~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~~V~~ 744 (840)
++|+.|++|||+++|+||||+.||.+||++|||..+. .++++|.++..++++++.+.+.+..||||++|+||.++|+.
T Consensus 554 ~aI~~l~~AGI~v~MiTGD~~~TA~aIa~~~Gi~~~~~~~~vi~G~el~~l~~~el~~~~~~~~VfARvsP~qK~~IV~~ 633 (917)
T COG0474 554 EAIEELREAGIKVWMITGDHVETAIAIAKECGIEAEAESALVIDGAELDALSDEELAELVEELSVFARVSPEQKARIVEA 633 (917)
T ss_pred HHHHHHHHCCCcEEEECCCCHHHHHHHHHHcCCCCCCCceeEeehHHhhhcCHHHHHHHhhhCcEEEEcCHHHHHHHHHH
Confidence 9999999999999999999999999999999998776 35999999999999999999999999999999999999999
Q ss_pred HHHhCCCEEEEEcCCccCHHHhhhCCccEEecCCCcHHHHhhcCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003189 745 LRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVN 824 (840)
Q Consensus 745 l~~~~g~~v~~~GDG~ND~~al~~Advgiamg~~g~~~ak~~aDivlldd~f~~i~~~i~~gR~~~~~i~k~i~f~l~~N 824 (840)
||++ |++|+|||||+||+||||+||||||||+.|+|+||++||++++||||++|+.++++||++|.|++|++.|.++.|
T Consensus 634 lq~~-g~vVamtGDGvNDapALk~ADVGIamg~~Gtdaak~Aadivl~dd~~~~i~~av~eGR~~~~ni~k~i~~~l~~n 712 (917)
T COG0474 634 LQKS-GHVVAMTGDGVNDAPALKAADVGIAMGGEGTDAAKEAADIVLLDDNFATIVLAVVEGRRVYVNIKKFILYLLSKN 712 (917)
T ss_pred HHhC-CCEEEEeCCCchhHHHHHhcCccEEecccHHHHHHhhcceEeecCcHHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 9999 999999999999999999999999999899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhcC
Q 003189 825 VVALIVNFSSACLTG 839 (840)
Q Consensus 825 ~~~l~~~~~~~~~~g 839 (840)
+..+++.+++.++..
T Consensus 713 ~~~~~~~~~~~~~~~ 727 (917)
T COG0474 713 VGEVLTLLIYSLFNL 727 (917)
T ss_pred HHHHHHHHHHHHHhc
Confidence 999988888877653
No 6
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=100.00 E-value=1.1e-116 Score=1083.38 Aligned_cols=698 Identities=30% Similarity=0.429 Sum_probs=596.6
Q ss_pred cCHHHHHHHhCCCcCCCCCccHHHHHHHHHhcCCCCCCCCCCccHHHHHHHHHhhhHHHHHHHHHHHHHHhhhccc----
Q 003189 119 GGVEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCALVSLVVGIATE---- 194 (840)
Q Consensus 119 ~gv~~l~~~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~~f~~~~~~~l~~~~~~il~i~a~is~~~~~~~~---- 194 (840)
..++++.+.|++++..||++++ +++|+++||+|+++.++.+++|+.++++|++++.++|++++++++++....+
T Consensus 20 ~~~~~~~~~l~t~~~~GLs~~e--~~~rl~~~G~N~l~~~~~~~~~~~~l~~~~~~~~~iL~~aa~l~~~~~~~~~~~~~ 97 (997)
T TIGR01106 20 LSLDELERKYGTDLSKGLSAAR--AAEILARDGPNALTPPPTTPEWVKFCRQLFGGFSMLLWIGAILCFLAYGIQASTEE 97 (997)
T ss_pred CCHHHHHHHhCcCcccCCCHHH--HHHHHHHhCCCCCCCCCCCCHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhhccCC
Confidence 4688899999999999999977 9999999999999999999999999999999999999999999876533221
Q ss_pred -CCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHhHhHhhhcCceEEEEECCeEEEEeccCCCCCcEEEecCCCccccc
Q 003189 195 -GWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPAD 273 (840)
Q Consensus 195 -~~~~~~~d~~~i~~~illv~~v~~~~~~~~~~~~~~l~~~~~~~~v~V~RdG~~~~I~~~dLvvGDIV~l~~Gd~VPaD 273 (840)
.....|++++.+++.+++..++..+.+++.++..+++.+ ..+..++|+|||++++|+++||||||+|.|++||+||||
T Consensus 98 ~~~~~~~~~~~~i~~vv~i~~~i~~~qe~ka~~~l~~l~~-~~~~~~~ViRdg~~~~I~~~~lv~GDiv~l~~Gd~IPaD 176 (997)
T TIGR01106 98 EPQNDNLYLGVVLSAVVIITGCFSYYQEAKSSKIMESFKN-MVPQQALVIRDGEKMSINAEQVVVGDLVEVKGGDRIPAD 176 (997)
T ss_pred CcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-cCCCeeEEEECCEEEEeeHHHCCCCCEEEECCCCEEeee
Confidence 112468888866655555555555555555555555655 345689999999999999999999999999999999999
Q ss_pred EEEEeecceEEecccccCCCCccccCCCC---------CeEEeccEEeeceEEEEEEEEcccchHHHHHHhhcCCCCCCC
Q 003189 274 GLFVSGFSVLINESSLTGESEPVNVNALN---------PFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDET 344 (840)
Q Consensus 274 gvll~g~~l~VDES~LTGES~pv~k~~~~---------~~l~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~~~t 344 (840)
|++++|+++.||||+|||||.|+.|.+++ +++|+||.|.+|.++++|++||.+|.+|++.+++.+...+++
T Consensus 177 ~~il~~~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~n~l~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~ 256 (997)
T TIGR01106 177 LRIISAQGCKVDNSSLTGESEPQTRSPEFTHENPLETRNIAFFSTNCVEGTARGIVVNTGDRTVMGRIASLASGLENGKT 256 (997)
T ss_pred EEEEEccCcEEEccccCCCCCceeccCCCcccCccccCCeEEeccEeeeeeEEEEEEEccccchhhHHHhhhhhcccCCC
Confidence 99999988999999999999999997543 479999999999999999999999999999999988888889
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhcccCCCccccCCcChHHHHHHHHHHHHHHHHhcCCchHHHHHHHH
Q 003189 345 PLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSL 424 (840)
Q Consensus 345 plq~~l~~~a~~~~~~~l~~a~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ai~ilvva~P~~Lplav~l~l 424 (840)
|+|+++++++..+..+++++++++|++++.. +. .+...+.+++++++++||||||+++++++
T Consensus 257 pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~----------~~~~~~~~~i~v~v~~iP~~L~~~v~i~l 318 (997)
T TIGR01106 257 PIAIEIEHFIHIITGVAVFLGVSFFILSLIL--------GY----------TWLEAVIFLIGIIVANVPEGLLATVTVCL 318 (997)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--------cC----------CHHHHHHHHHHHHhhcCCccchHHHHHHH
Confidence 9999999999999998888887776654321 00 24567788999999999999999999999
Q ss_pred HHHHHHHhccccccccchhhhccCCeeEEEecccCccccCceEEEEEEEcCeeeeecCCCCCCCCCCCCChhHHHHHHHH
Q 003189 425 AFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQS 504 (840)
Q Consensus 425 ~~~~~~l~~~~ilvr~~~a~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 504 (840)
++++++|+++|++||+++++|+||++|+||||||||||+|+|+|.++|+.+..+..+.................+.+...
T Consensus 319 ~~~~~~m~~~~ilvk~~~aiE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ 398 (997)
T TIGR01106 319 TLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTEDQSGVSFDKSSATWLALSRI 398 (997)
T ss_pred HHHHHHHHHCCcEecCcHHHHHhcCCCEEEECCCCceecCceEEEEEEECCeEEecCCccCCCCccCCcccHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999988776543221100000001111233345556
Q ss_pred HHhcCCceEEecCCC----ceeEcCChhhHHHHHHHHHcCCChHHHhhccceEEEecCCCCCceEEEEEEeC---CCcEE
Q 003189 505 IFNNTGGEVVIGEGN----KTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELP---EGGFR 577 (840)
Q Consensus 505 i~~~~~~~~~~~~~~----~~~~~g~p~e~All~~~~~~~~~~~~~~~~~~i~~~~pF~s~~k~~~vv~~~~---~~~~~ 577 (840)
++.|+++....+.++ .....|+|+|.||++++...+.+....+..+++++.+||+|+||+|++++... ++.++
T Consensus 399 ~alcn~~~~~~~~~~~~~~~~~~~gdp~E~ALl~~a~~~~~~~~~~~~~~~~v~~~pF~s~rK~m~~v~~~~~~~~~~~~ 478 (997)
T TIGR01106 399 AGLCNRAVFKAGQENVPILKRAVAGDASESALLKCIELCLGSVMEMRERNPKVVEIPFNSTNKYQLSIHENEDPRDPRHL 478 (997)
T ss_pred HHHcCCCeeccccCCCcccccccCcChHHHHHHHHHHHhCCCHHHHHhhCceeEEeccCCCCceEEEEEeccCCCCceEE
Confidence 666766655433222 23457999999999999877667777788899999999999999999987643 24688
Q ss_pred EEEcCchHHHHHhcccccccCCceeeCCHHHHHHHHHHHHHHHHcccceeEEEEEEcCCCCCC--------CCCCCCCce
Q 003189 578 VHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSA--------DAPIPTEGY 649 (840)
Q Consensus 578 ~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~glr~l~~A~~~~~~~~~~--------~~~~~~~~~ 649 (840)
+++|||||.|++.|++++ .+|...+++++.++.+++.+++|+++|+|++++|||+++.+... +.+..|+++
T Consensus 479 ~~~KGApe~Il~~c~~~~-~~g~~~~l~~~~~~~~~~~~~~~a~~GlRvla~A~k~l~~~~~~~~~~~~~~~~~~~e~~L 557 (997)
T TIGR01106 479 LVMKGAPERILERCSSIL-IHGKEQPLDEELKEAFQNAYLELGGLGERVLGFCHLYLPDEQFPEGFQFDTDDVNFPTDNL 557 (997)
T ss_pred EEEeCChHHHHHHhhHHh-cCCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEEeecCcccccccccccchhhhccccCc
Confidence 999999999999999876 57888999999999999999999999999999999998643111 012237899
Q ss_pred eeeeeecccCCCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCC------------------------Cc
Q 003189 650 TCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDN------------------------GI 705 (840)
Q Consensus 650 ~~lg~~~~~D~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~------------------------~~ 705 (840)
+|+|+++++||+||+++++|++|+++||+|+|+|||+..||.++|+++||..++ ..
T Consensus 558 ~flGli~i~Dplr~~v~~aI~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 637 (997)
T TIGR01106 558 CFVGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETVEDIAARLNIPVSQVNPRDAKAC 637 (997)
T ss_pred EEEEEEeccCCChHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCccchhhhhhhccccccccccccccce
Confidence 999999999999999999999999999999999999999999999999997542 26
Q ss_pred cccChhhhcCCHHHHhhhcCCce--EEEecCcccHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEEecCCCcHHH
Q 003189 706 AIEGPEFREKSDEELSKLIPKIQ--VMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVA 783 (840)
Q Consensus 706 ~~~g~~~~~~~~~~~~~~~~~~~--v~ar~~P~~K~~~V~~l~~~~g~~v~~~GDG~ND~~al~~Advgiamg~~g~~~a 783 (840)
+++|.+++.++++++.+.+++.. ||||++|+||+++|+.||+. |++|+|+|||.||+|||++||||||||++|+|++
T Consensus 638 vi~G~~l~~l~~~el~~~~~~~~~~VfaR~sPeqK~~IV~~lq~~-g~vv~~~GDG~ND~paLk~AdVGiamg~~G~~va 716 (997)
T TIGR01106 638 VVHGSDLKDMTSEQLDEILKYHTEIVFARTSPQQKLIIVEGCQRQ-GAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVS 716 (997)
T ss_pred EEEhHHhhhCCHHHHHHHHHhcCCEEEEECCHHHHHHHHHHHHHC-CCEEEEECCCcccHHHHhhCCcceecCCcccHHH
Confidence 99999999999999999987764 99999999999999999998 9999999999999999999999999998999999
Q ss_pred HhhcCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcC
Q 003189 784 KESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTG 839 (840)
Q Consensus 784 k~~aDivlldd~f~~i~~~i~~gR~~~~~i~k~i~f~l~~N~~~l~~~~~~~~~~g 839 (840)
|++||+||+||||++|+++++|||++|.||+|+++|+++.|+..+++.++++++.+
T Consensus 717 k~aADivL~dd~f~~Iv~ai~~GR~i~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~ 772 (997)
T TIGR01106 717 KQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLIFIIANI 772 (997)
T ss_pred HHhhceEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHcC
Confidence 99999999999999999999999999999999999999999999999999887753
No 7
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=100.00 E-value=5.9e-117 Score=1069.15 Aligned_cols=653 Identities=25% Similarity=0.398 Sum_probs=575.4
Q ss_pred CHHHHHHHhCCCcCCCCCccHHHHHHHHHhcCCCCCCCCCCccHHHHHHHHHhhhHHHHHHHHHHHHHHhhhcccCCCCC
Q 003189 120 GVEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCALVSLVVGIATEGWPKG 199 (840)
Q Consensus 120 gv~~l~~~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~~f~~~~~~~l~~~~~~il~i~a~is~~~~~~~~~~~~~ 199 (840)
..+.+.+.++++. .||++++ +++|++.||+|+++.++++++|+.+|++|++++.++++++++++++++ .
T Consensus 53 ~~~~v~~~l~~~~-~GLs~~e--a~~r~~~~G~N~l~~~~~~s~~~~~~~~~~~p~~~lL~~aa~ls~~~~--------~ 121 (902)
T PRK10517 53 PEEELWKTFDTHP-EGLNEAE--VESAREQHGENELPAQKPLPWWVHLWVCYRNPFNILLTILGAISYATE--------D 121 (902)
T ss_pred CHHHHHHHhCCCC-CCCCHHH--HHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHc--------c
Confidence 4677778888886 6999877 999999999999999999999999999999999999999999998765 5
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHhHhHhhhcCceEEEEEC------CeEEEEeccCCCCCcEEEecCCCccccc
Q 003189 200 AHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARN------GFRRKISIYDLLPGDIVHLCMGDQVPAD 273 (840)
Q Consensus 200 ~~d~~~i~~~illv~~v~~~~~~~~~~~~~~l~~~~~~~~v~V~Rd------G~~~~I~~~dLvvGDIV~l~~Gd~VPaD 273 (840)
|++++.|++.+++..++..+.+++.++..++|.+.. +.+++|+|| |++++|+++||||||+|.|++||+||||
T Consensus 122 ~~~a~~I~~iv~i~~~i~~~qe~ra~~~~~~L~~l~-~~~a~ViR~g~~~~~g~~~~I~~~eLvpGDiV~l~~Gd~IPaD 200 (902)
T PRK10517 122 LFAAGVIALMVAISTLLNFIQEARSTKAADALKAMV-SNTATVLRVINDKGENGWLEIPIDQLVPGDIIKLAAGDMIPAD 200 (902)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhC-CCeEEEEECCccCCCCeEEEEEHHhCCCCCEEEECCCCEEeee
Confidence 889998888888888888888988888888888754 458999999 7899999999999999999999999999
Q ss_pred EEEEeecceEEecccccCCCCccccCCCC------------CeEEeccEEeeceEEEEEEEEcccchHHHHHHhhcCCCC
Q 003189 274 GLFVSGFSVLINESSLTGESEPVNVNALN------------PFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGD 341 (840)
Q Consensus 274 gvll~g~~l~VDES~LTGES~pv~k~~~~------------~~l~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~ 341 (840)
|++++|+++.||||+|||||.|+.|..++ +.+|+||.|.+|+++++|++||.+|++|+|.+++.+...
T Consensus 201 g~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT~V~~G~~~~vV~atG~~T~~GkI~~~v~~~~~ 280 (902)
T PRK10517 201 LRILQARDLFVAQASLTGESLPVEKFATTRQPEHSNPLECDTLCFMGTNVVSGTAQAVVIATGANTWFGQLAGRVSEQDS 280 (902)
T ss_pred EEEEEcCceEEEecCcCCCCCceecccccccccccCccccccceeeCceEeeeeEEEEEEEeccccHHHHHHHHhhccCC
Confidence 99999988999999999999999997543 479999999999999999999999999999999999888
Q ss_pred CCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhcccCCCccccCCcChHHHHHHHHHHHHHHHHhcCCchHHHHH
Q 003189 342 DETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVT 421 (840)
Q Consensus 342 ~~tplq~~l~~~a~~~~~~~l~~a~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ai~ilvva~P~~Lplav~ 421 (840)
+++|+|+.++++++++..++++++.++++++.. . .+ ++...+.+++++++++||||||++++
T Consensus 281 ~~t~lq~~~~~i~~~l~~~~~~~~~~v~~i~~~---~----~~-----------~~~~~l~~alsv~V~~~Pe~LP~~vt 342 (902)
T PRK10517 281 EPNAFQQGISRVSWLLIRFMLVMAPVVLLINGY---T----KG-----------DWWEAALFALSVAVGLTPEMLPMIVT 342 (902)
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHhhhHHHH---h----cC-----------CHHHHHHHHHHHHHHHcccHHHHHHH
Confidence 899999999999999998888777766655321 0 00 25577889999999999999999999
Q ss_pred HHHHHHHHHHhccccccccchhhhccCCeeEEEecccCccccCceEEEEEEEcCeeeeecCCCCCCCCCCCCChhHHHHH
Q 003189 422 LSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLL 501 (840)
Q Consensus 422 l~l~~~~~~l~~~~ilvr~~~a~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 501 (840)
++++.++++|+++|++||+++++|+||++|+||||||||||+|+|+|.+++.... .+ ..+++
T Consensus 343 ~~la~g~~~mak~~ilVk~l~aiE~lg~v~vic~DKTGTLT~n~m~V~~~~~~~~----------------~~--~~~ll 404 (902)
T PRK10517 343 STLARGAVKLSKQKVIVKRLDAIQNFGAMDILCTDKTGTLTQDKIVLENHTDISG----------------KT--SERVL 404 (902)
T ss_pred HHHHHHHHHHHhCCcEEecchhhhhccCCCEEEecCCCccccceEEEEEEecCCC----------------CC--HHHHH
Confidence 9999999999999999999999999999999999999999999999987632110 00 11222
Q ss_pred HHHHHhcCCceEEecCCCceeEcCChhhHHHHHHHHHcCCChHHHhhccceEEEecCCCCCceEEEEEEeCCCcEEEEEc
Q 003189 502 LQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCK 581 (840)
Q Consensus 502 ~~~i~~~~~~~~~~~~~~~~~~~g~p~e~All~~~~~~~~~~~~~~~~~~i~~~~pF~s~~k~~~vv~~~~~~~~~~~~K 581 (840)
...+.|+.. . ...+||+|.|+++++...+ .......++.++.+||+|.+|+|+++++..++.+.+++|
T Consensus 405 -~~a~l~~~~--~-------~~~~~p~d~All~~a~~~~--~~~~~~~~~~~~~~pFds~~k~msvvv~~~~~~~~~~~K 472 (902)
T PRK10517 405 -HSAWLNSHY--Q-------TGLKNLLDTAVLEGVDEES--ARSLASRWQKIDEIPFDFERRRMSVVVAENTEHHQLICK 472 (902)
T ss_pred -HHHHhcCCc--C-------CCCCCHHHHHHHHHHHhcc--hhhhhhcCceEEEeeeCCCcceEEEEEEECCCeEEEEEe
Confidence 223333321 1 1268999999999986543 123345677889999999999999998877777889999
Q ss_pred CchHHHHHhcccccccCCceeeCCHHHHHHHHHHHHHHHHcccceeEEEEEEcCCCCCCCCCCCCCceeeeeeecccCCC
Q 003189 582 GASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPM 661 (840)
Q Consensus 582 Ga~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~glr~l~~A~~~~~~~~~~~~~~~~~~~~~lg~~~~~D~l 661 (840)
|+||.+++.|+++. .+|...+++++.++.+.+..++++++|+|++++|||+++.++.......|++++|+|+++|+||+
T Consensus 473 Ga~e~il~~c~~~~-~~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~k~~~~~~~~~~~~~e~~l~~lGli~~~Dp~ 551 (902)
T PRK10517 473 GALEEILNVCSQVR-HNGEIVPLDDIMLRRIKRVTDTLNRQGLRVVAVATKYLPAREGDYQRADESDLILEGYIAFLDPP 551 (902)
T ss_pred CchHHHHHhchhhh-cCCCeecCCHHHHHHHHHHHHHHHhcCCEEEEEEEecCCccccccccccccCceeeehHhhhCcc
Confidence 99999999999875 46677899999999999999999999999999999987654321111236799999999999999
Q ss_pred CcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCcccHHHH
Q 003189 662 RPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTL 741 (840)
Q Consensus 662 R~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~~ 741 (840)
||+++++|++|+++||+|+|+||||+.||.++|+++||. ++.+++|.+++.++++++.+.++++.||||++|+||.++
T Consensus 552 R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~--~~~v~~G~el~~l~~~el~~~~~~~~VfAr~sPe~K~~I 629 (902)
T PRK10517 552 KETTAPALKALKASGVTVKILTGDSELVAAKVCHEVGLD--AGEVLIGSDIETLSDDELANLAERTTLFARLTPMHKERI 629 (902)
T ss_pred hhhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC--ccCceeHHHHHhCCHHHHHHHHhhCcEEEEcCHHHHHHH
Confidence 999999999999999999999999999999999999995 357999999999999999999999999999999999999
Q ss_pred HHHHHHhCCCEEEEEcCCccCHHHhhhCCccEEecCCCcHHHHhhcCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHH
Q 003189 742 VKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQL 821 (840)
Q Consensus 742 V~~l~~~~g~~v~~~GDG~ND~~al~~Advgiamg~~g~~~ak~~aDivlldd~f~~i~~~i~~gR~~~~~i~k~i~f~l 821 (840)
|+.||++ |++|+|||||+||+|||++|||||||| +|+|+||++||+||+||||++|++++++||++|+||+|+++|++
T Consensus 630 V~~Lq~~-G~vVam~GDGvNDaPALk~ADVGIAmg-~gtdvAkeaADiVLldd~~~~I~~ai~~gR~i~~nI~k~i~~~l 707 (902)
T PRK10517 630 VTLLKRE-GHVVGFMGDGINDAPALRAADIGISVD-GAVDIAREAADIILLEKSLMVLEEGVIEGRRTFANMLKYIKMTA 707 (902)
T ss_pred HHHHHHC-CCEEEEECCCcchHHHHHhCCEEEEeC-CcCHHHHHhCCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999998 999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhh
Q 003189 822 TVNVVALIVNFSSACL 837 (840)
Q Consensus 822 ~~N~~~l~~~~~~~~~ 837 (840)
+.|+..++..++++++
T Consensus 708 s~n~~~v~~~~~~~~~ 723 (902)
T PRK10517 708 SSNFGNVFSVLVASAF 723 (902)
T ss_pred HhhHHHHHHHHHHHHH
Confidence 9999998888877665
No 8
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=100.00 E-value=4.6e-116 Score=1063.23 Aligned_cols=661 Identities=26% Similarity=0.397 Sum_probs=576.2
Q ss_pred CHHHHHHHhCCCcCCCCCccHHHHHHHHHhcCCCCCCCCCCccHHHHHHHHHhhhHHHHHHHHHHHHHHhhhccc---CC
Q 003189 120 GVEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCALVSLVVGIATE---GW 196 (840)
Q Consensus 120 gv~~l~~~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~~f~~~~~~~l~~~~~~il~i~a~is~~~~~~~~---~~ 196 (840)
..+.+...|+++. .||++++ +++|+++||+|+++.++.+++|+.++++|++++.++|+++++++++++.+.. +.
T Consensus 31 ~~~~v~~~l~~~~-~GLs~~e--a~~rl~~~G~N~l~~~~~~~~~~~~l~~f~~~~~~iL~~aa~ls~~~~~~~~~~~~~ 107 (903)
T PRK15122 31 SLEETLANLNTHR-QGLTEED--AAERLQRYGPNEVAHEKPPHALVQLLQAFNNPFIYVLMVLAAISFFTDYWLPLRRGE 107 (903)
T ss_pred CHHHHHHHhCCCC-CCCCHHH--HHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhccCCc
Confidence 4667777888884 7999877 9999999999999999999999999999999999999999999998875421 22
Q ss_pred CCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHhHhHhhhcCceEEEEEC------CeEEEEeccCCCCCcEEEecCCCcc
Q 003189 197 PKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARN------GFRRKISIYDLLPGDIVHLCMGDQV 270 (840)
Q Consensus 197 ~~~~~d~~~i~~~illv~~v~~~~~~~~~~~~~~l~~~~~~~~v~V~Rd------G~~~~I~~~dLvvGDIV~l~~Gd~V 270 (840)
...|++++.|++.+++..++..+.+|+.+++.++|.+.. +..++|+|| |++++|+++||||||+|.|++||+|
T Consensus 108 ~~~~~~~~iI~~~v~l~~~i~~~qe~~a~~a~~~L~~l~-~~~~~V~Rdg~~~~~g~~~~I~~~eLv~GDiV~l~~Gd~I 186 (903)
T PRK15122 108 ETDLTGVIIILTMVLLSGLLRFWQEFRSNKAAEALKAMV-RTTATVLRRGHAGAEPVRREIPMRELVPGDIVHLSAGDMI 186 (903)
T ss_pred cccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-CCceEEEECCccCCCCeEEEEEHHHCCCCCEEEECCCCEE
Confidence 246999999999999999999999999999999998754 458999999 4799999999999999999999999
Q ss_pred cccEEEEeecceEEecccccCCCCccccCC--C--------------------CCeEEeccEEeeceEEEEEEEEcccch
Q 003189 271 PADGLFVSGFSVLINESSLTGESEPVNVNA--L--------------------NPFLLSGTKVQNGSCKMLVTTVGMRTQ 328 (840)
Q Consensus 271 PaDgvll~g~~l~VDES~LTGES~pv~k~~--~--------------------~~~l~sGt~v~~G~~~~~V~~vG~~T~ 328 (840)
||||++++|+++.||||+|||||.|+.|.. + ++.+|+||.|.+|+++++|++||.+|+
T Consensus 187 PaDg~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~~~~~~~~~~~n~vfaGT~V~~G~~~~~V~atG~~T~ 266 (903)
T PRK15122 187 PADVRLIESRDLFISQAVLTGEALPVEKYDTLGAVAGKSADALADDEGSLLDLPNICFMGTNVVSGTATAVVVATGSRTY 266 (903)
T ss_pred eeeEEEEEcCceEEEccccCCCCcceeeeccccccccccccccccccCCcccccceEEeCCEEEeeeEEEEEEEeccccH
Confidence 999999999889999999999999999974 1 267999999999999999999999999
Q ss_pred HHHHHHhhcCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhcccCCCccccCCcChHHHHHHHHHHHHHH
Q 003189 329 WGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIV 408 (840)
Q Consensus 329 ~g~i~~~~~~~~~~~tplq~~l~~~a~~~~~~~l~~a~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ai~il 408 (840)
+|+|.+++.+ ...++|+|++++++++++..+++.++.+++++.. +. . .++.+.+.++++++
T Consensus 267 ~gkI~~~v~~-~~~~t~l~~~l~~i~~~l~~~~~~~~~~v~~~~~---~~----~-----------~~~~~~l~~aisl~ 327 (903)
T PRK15122 267 FGSLAKSIVG-TRAQTAFDRGVNSVSWLLIRFMLVMVPVVLLING---FT----K-----------GDWLEALLFALAVA 327 (903)
T ss_pred hhHHHHHhcC-CCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhh---hc----c-----------CCHHHHHHHHHHHH
Confidence 9999999987 5567999999999999988877766655444321 10 0 03567888999999
Q ss_pred HHhcCCchHHHHHHHHHHHHHHHhccccccccchhhhccCCeeEEEecccCccccCceEEEEEEEcCeeeeecCCCCCCC
Q 003189 409 VVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPA 488 (840)
Q Consensus 409 vva~P~~Lplav~l~l~~~~~~l~~~~ilvr~~~a~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~ 488 (840)
+++||||||++++++++.++++|+++|++||+++++|+||++|+||||||||||+|+|+|.+++..+..
T Consensus 328 V~~~Pe~Lp~~vt~~La~g~~~mak~~ilVk~l~avE~Lg~v~vIc~DKTGTLT~~~m~V~~~~~~~~~----------- 396 (903)
T PRK15122 328 VGLTPEMLPMIVSSNLAKGAIAMARRKVVVKRLNAIQNFGAMDVLCTDKTGTLTQDRIILEHHLDVSGR----------- 396 (903)
T ss_pred HHHccchHHHHHHHHHHHHHHHHHHcCCeecccchhhhhcCCcEEEecCCcccccCeEEEEEEEcCCCC-----------
Confidence 999999999999999999999999999999999999999999999999999999999999987643211
Q ss_pred CCCCCChhHHHHHHHHHHhcCCceEEecCCCceeEcCChhhHHHHHHHHHcCCChHHHhhccceEEEecCCCCCceEEEE
Q 003189 489 FGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVV 568 (840)
Q Consensus 489 ~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~g~p~e~All~~~~~~~~~~~~~~~~~~i~~~~pF~s~~k~~~vv 568 (840)
.+++ ++..+ +.|+.. . ..++||+|.|+++++.+.+.+ .....++.++.+||+|.+|+|+++
T Consensus 397 ----~~~~---~l~~a-~l~s~~--~-------~~~~~p~e~All~~a~~~~~~--~~~~~~~~~~~~pF~s~~k~ms~v 457 (903)
T PRK15122 397 ----KDER---VLQLA-WLNSFH--Q-------SGMKNLMDQAVVAFAEGNPEI--VKPAGYRKVDELPFDFVRRRLSVV 457 (903)
T ss_pred ----ChHH---HHHHH-HHhCCC--C-------CCCCChHHHHHHHHHHHcCch--hhhhcCceEEEeeeCCCcCEEEEE
Confidence 0112 22222 223211 0 126899999999999876542 233467788999999999999999
Q ss_pred EEeCCCcEEEEEcCchHHHHHhcccccccCCceeeCCHHHHHHHHHHHHHHHHcccceeEEEEEEcCCCCCCC--CCCCC
Q 003189 569 IELPEGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSAD--APIPT 646 (840)
Q Consensus 569 ~~~~~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~glr~l~~A~~~~~~~~~~~--~~~~~ 646 (840)
++..++++++++||+||.+++.|+++. .+|...+++++.++++.+.+++|+.+|+|++++|||+++.++..+ ....+
T Consensus 458 ~~~~~~~~~~~~KGa~e~il~~c~~~~-~~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~k~~~~~~~~~~~~~~~e 536 (903)
T PRK15122 458 VEDAQGQHLLICKGAVEEMLAVATHVR-DGDTVRPLDEARRERLLALAEAYNADGFRVLLVATREIPGGESRAQYSTADE 536 (903)
T ss_pred EEcCCCcEEEEECCcHHHHHHhchhhh-cCCCeecCCHHHHHHHHHHHHHHHhCCCEEEEEEEeccCccccccccccccc
Confidence 887677788999999999999999765 467778999999999999999999999999999999886542211 12246
Q ss_pred CceeeeeeecccCCCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCC
Q 003189 647 EGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPK 726 (840)
Q Consensus 647 ~~~~~lg~~~~~D~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~ 726 (840)
++++|+|+++|+||+||+++++|++|+++||+|+|+|||++.||.++|+++||.. +.+++|.+++.++++++.+.+++
T Consensus 537 ~~l~~lGli~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~aIA~~lGI~~--~~vi~G~el~~~~~~el~~~v~~ 614 (903)
T PRK15122 537 RDLVIRGFLTFLDPPKESAAPAIAALRENGVAVKVLTGDNPIVTAKICREVGLEP--GEPLLGTEIEAMDDAALAREVEE 614 (903)
T ss_pred cCcEEEEEEeccCccHHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCC--CCccchHhhhhCCHHHHHHHhhh
Confidence 7899999999999999999999999999999999999999999999999999953 46899999999999999999999
Q ss_pred ceEEEecCcccHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEEecCCCcHHHHhhcCEEeccCCchHHHHHHHHH
Q 003189 727 IQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWG 806 (840)
Q Consensus 727 ~~v~ar~~P~~K~~~V~~l~~~~g~~v~~~GDG~ND~~al~~Advgiamg~~g~~~ak~~aDivlldd~f~~i~~~i~~g 806 (840)
..||||++|+||+++|+.||++ |++|+|||||+||+|||++|||||||| +|+|+||++||+||+||||++|++++++|
T Consensus 615 ~~VfAr~sPe~K~~iV~~Lq~~-G~vVamtGDGvNDaPALk~ADVGIAmg-~gtdvAkeaADiVLldd~f~~Iv~ai~~g 692 (903)
T PRK15122 615 RTVFAKLTPLQKSRVLKALQAN-GHTVGFLGDGINDAPALRDADVGISVD-SGADIAKESADIILLEKSLMVLEEGVIKG 692 (903)
T ss_pred CCEEEEeCHHHHHHHHHHHHhC-CCEEEEECCCchhHHHHHhCCEEEEeC-cccHHHHHhcCEEEecCChHHHHHHHHHH
Confidence 9999999999999999999999 999999999999999999999999999 99999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 003189 807 RSVYINIQKFVQFQLTVNVVALIVNFSSACLT 838 (840)
Q Consensus 807 R~~~~~i~k~i~f~l~~N~~~l~~~~~~~~~~ 838 (840)
|++|+||+|+++|+++.|+..++..+++.++.
T Consensus 693 R~i~~nI~k~i~~~ls~n~~~~~~~~~~~~~~ 724 (903)
T PRK15122 693 RETFGNIIKYLNMTASSNFGNVFSVLVASAFI 724 (903)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHh
Confidence 99999999999999999998888777766553
No 9
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=100.00 E-value=8.8e-116 Score=1060.14 Aligned_cols=653 Identities=27% Similarity=0.384 Sum_probs=575.1
Q ss_pred CHHHHHHHhCCCcCCCCCccHHHHHHHHHhcCCCCCCCCCCccHHHHHHHHHhhhHHHHHHHHHHHHHHhhhcccCCCCC
Q 003189 120 GVEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCALVSLVVGIATEGWPKG 199 (840)
Q Consensus 120 gv~~l~~~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~~f~~~~~~~l~~~~~~il~i~a~is~~~~~~~~~~~~~ 199 (840)
.++.+.+.|+++. .||++++ +.+|++.||+|+++.++.+++|+.++++|+++++++|+++++++++.+ .
T Consensus 19 ~~~~~~~~l~~~~-~GLs~~e--v~~r~~~~G~N~l~~~~~~~~~~~~~~~~~~p~~~iL~~~a~ls~~~~--------~ 87 (867)
T TIGR01524 19 GKETLLRKLGVHE-TGLTNVE--VTERLAEFGPNQTVEEKKVPNLRLLIRAFNNPFIYILAMLMGVSYLTD--------D 87 (867)
T ss_pred CHHHHHHHhCCCC-CCCCHHH--HHHHHHhcCCCcCCCCCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHHh--------h
Confidence 5788888999886 6999877 999999999999999988999999999999999999999999998775 5
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHhHhHhhhcCceEEEEE------CCeEEEEeccCCCCCcEEEecCCCccccc
Q 003189 200 AHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVAR------NGFRRKISIYDLLPGDIVHLCMGDQVPAD 273 (840)
Q Consensus 200 ~~d~~~i~~~illv~~v~~~~~~~~~~~~~~l~~~~~~~~v~V~R------dG~~~~I~~~dLvvGDIV~l~~Gd~VPaD 273 (840)
|++++.|++.+++..++..+.+++.++..+.|.+.. +..++|+| ||++++|+++||||||+|.|++||+||||
T Consensus 88 ~~~~~iI~~iv~~~~~i~~~~e~~a~ka~~~L~~l~-~~~~~V~R~~~~~~dg~~~~I~~~eLv~GDiV~l~~Gd~VPaD 166 (867)
T TIGR01524 88 LEATVIIALMVLASGLLGFIQESRAERAAYALKNMV-KNTATVLRVINENGNGSMDEVPIDALVPGDLIELAAGDIIPAD 166 (867)
T ss_pred HHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHhhhc-cCeeEEEEecccCCCCeEEEEEhhcCCCCCEEEECCCCEEccc
Confidence 889999998888888888899998888888888754 45899999 99999999999999999999999999999
Q ss_pred EEEEeecceEEecccccCCCCccccCCCC------------CeEEeccEEeeceEEEEEEEEcccchHHHHHHhhcCCCC
Q 003189 274 GLFVSGFSVLINESSLTGESEPVNVNALN------------PFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGD 341 (840)
Q Consensus 274 gvll~g~~l~VDES~LTGES~pv~k~~~~------------~~l~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~ 341 (840)
|++++|+++.||||+|||||.|+.|..++ +++|+||.|.+|+++++|++||.+|++|+|.+++.+ ..
T Consensus 167 g~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT~v~~G~~~~~V~~tG~~T~~gki~~~v~~-~~ 245 (867)
T TIGR01524 167 ARVISARDLFINQSALTGESLPVEKFVEDKRARDPEILERENLCFMGTNVLSGHAQAVVLATGSSTWFGSLAIAATE-RR 245 (867)
T ss_pred EEEEecCceEEEcccccCCCCcccccCCccccccccccccccceecCCeEEEeEEEEEEEEEcCccHHHHHHHHhhC-CC
Confidence 99999988999999999999999997653 479999999999999999999999999999999988 66
Q ss_pred CCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhcccCCCccccCCcChHHHHHHHHHHHHHHHHhcCCchHHHHH
Q 003189 342 DETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVT 421 (840)
Q Consensus 342 ~~tplq~~l~~~a~~~~~~~l~~a~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ai~ilvva~P~~Lplav~ 421 (840)
+++|+|++++++++++.++++++++++|+++.. . .+ ++.+.+.+++++++++||||||++++
T Consensus 246 ~~t~lq~~~~~i~~~~~~~~~~~~~i~~~~~~~---~----~~-----------~~~~~~~~al~l~v~~iP~~Lp~~vt 307 (867)
T TIGR01524 246 GQTAFDKGVKSVSKLLIRFMLVMVPVVLMINGL---M----KG-----------DWLEAFLFALAVAVGLTPEMLPMIVS 307 (867)
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHheehHHH---h----cC-----------CHHHHHHHHHHHHHHhCcchHHHHHH
Confidence 679999999999999999888887776655421 0 00 24577889999999999999999999
Q ss_pred HHHHHHHHHHhccccccccchhhhccCCeeEEEecccCccccCceEEEEEEEcCeeeeecCCCCCCCCCCCCChhHHHHH
Q 003189 422 LSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLL 501 (840)
Q Consensus 422 l~l~~~~~~l~~~~ilvr~~~a~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 501 (840)
++++.++++|+++|++||+++++|+||++|+||||||||||+|+|+|.+++..... ...+++
T Consensus 308 ~~la~g~~~mak~~ilvk~l~aiE~lg~v~vic~DKTGTLT~~~m~v~~~~~~~~~------------------~~~~~l 369 (867)
T TIGR01524 308 SNLAKGAINMSKKKVIVKELSAIQNFGAMDILCTDKTGTLTQDKIELEKHIDSSGE------------------TSERVL 369 (867)
T ss_pred HHHHHHHHHHHhCCcEEccchhhhhccCccEEEecCCCccccCeEEEEEEecCCCC------------------CHHHHH
Confidence 99999999999999999999999999999999999999999999999987522110 011222
Q ss_pred HHHHHhcCCceEEecCCCceeEcCChhhHHHHHHHHHcCCChHHHhhccceEEEecCCCCCceEEEEEEeCCCcEEEEEc
Q 003189 502 LQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCK 581 (840)
Q Consensus 502 ~~~i~~~~~~~~~~~~~~~~~~~g~p~e~All~~~~~~~~~~~~~~~~~~i~~~~pF~s~~k~~~vv~~~~~~~~~~~~K 581 (840)
.. ++.|+.. . ..++||+|.|+++++.... ....+..++.++.+||+|++|+|+++++.+++.+++++|
T Consensus 370 ~~-a~l~~~~--~-------~~~~~p~~~Al~~~~~~~~--~~~~~~~~~~~~~~pF~s~~k~ms~~v~~~~~~~~~~~K 437 (867)
T TIGR01524 370 KM-AWLNSYF--Q-------TGWKNVLDHAVLAKLDESA--ARQTASRWKKVDEIPFDFDRRRLSVVVENRAEVTRLICK 437 (867)
T ss_pred HH-HHHhCCC--C-------CCCCChHHHHHHHHHHhhc--hhhHhhcCceEEEeccCCCcCEEEEEEEcCCceEEEEEe
Confidence 22 2333221 1 1257999999999986532 223445678889999999999999998866666889999
Q ss_pred CchHHHHHhcccccccCCceeeCCHHHHHHHHHHHHHHHHcccceeEEEEEEcCCCCCCCCCCCCCceeeeeeecccCCC
Q 003189 582 GASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPM 661 (840)
Q Consensus 582 Ga~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~glr~l~~A~~~~~~~~~~~~~~~~~~~~~lg~~~~~D~l 661 (840)
|+||.+++.|+++. .+|...+++++.++++++.+++|+++|+|++++|||+++.++.......+++++|+|+++|+||+
T Consensus 438 Ga~e~il~~c~~~~-~~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~~~~~~~~~~~~~~~e~~l~~lGli~l~Dp~ 516 (867)
T TIGR01524 438 GAVEEMLTVCTHKR-FGGAVVTLSESEKSELQDMTAEMNRQGIRVIAVATKTLKVGEADFTKTDEEQLIIEGFLGFLDPP 516 (867)
T ss_pred CcHHHHHHhchhhh-cCCceecCCHHHHHHHHHHHHHHHhcCCEEEEEEEeccCcccccccccccCCcEEEEEEEeeCCC
Confidence 99999999999774 46777899999889999999999999999999999988654321111236789999999999999
Q ss_pred CcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCcccHHHH
Q 003189 662 RPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTL 741 (840)
Q Consensus 662 R~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~~ 741 (840)
||+++++|++|+++||+|+|+|||+..||.++|+++||.. +.+++|.+++.++++++.+.++++.||||++|+||.++
T Consensus 517 R~~~~~aI~~l~~aGI~vvmiTGD~~~tA~aIA~~lGI~~--~~v~~g~~l~~~~~~el~~~~~~~~vfAr~~Pe~K~~i 594 (867)
T TIGR01524 517 KESTKEAIAALFKNGINVKVLTGDNEIVTARICQEVGIDA--NDFLLGADIEELSDEELARELRKYHIFARLTPMQKSRI 594 (867)
T ss_pred chhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCC--CCeeecHhhhhCCHHHHHHHhhhCeEEEECCHHHHHHH
Confidence 9999999999999999999999999999999999999963 46899999999999999999999999999999999999
Q ss_pred HHHHHHhCCCEEEEEcCCccCHHHhhhCCccEEecCCCcHHHHhhcCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHH
Q 003189 742 VKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQL 821 (840)
Q Consensus 742 V~~l~~~~g~~v~~~GDG~ND~~al~~Advgiamg~~g~~~ak~~aDivlldd~f~~i~~~i~~gR~~~~~i~k~i~f~l 821 (840)
|+.||++ |++|+|||||+||+|||++|||||||| +|+|+||++||+||+||||++|++++++||++|+||+||++|++
T Consensus 595 V~~lq~~-G~vVam~GDGvNDapALk~AdVGIAmg-~gtdvAk~aADiVLldd~~~~I~~ai~~gR~i~~ni~k~i~~~l 672 (867)
T TIGR01524 595 IGLLKKA-GHTVGFLGDGINDAPALRKADVGISVD-TAADIAKEASDIILLEKSLMVLEEGVIEGRNTFGNILKYLKMTA 672 (867)
T ss_pred HHHHHhC-CCEEEEECCCcccHHHHHhCCEEEEeC-CccHHHHHhCCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999 999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhhc
Q 003189 822 TVNVVALIVNFSSACLT 838 (840)
Q Consensus 822 ~~N~~~l~~~~~~~~~~ 838 (840)
+.|+..++..++++++.
T Consensus 673 s~n~~~~~~~~~~~~~~ 689 (867)
T TIGR01524 673 SSNFGNVFSVLVASAFI 689 (867)
T ss_pred hhhHHHHHHHHHHHHHh
Confidence 99999888877776653
No 10
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=100.00 E-value=6.4e-115 Score=1059.17 Aligned_cols=673 Identities=33% Similarity=0.530 Sum_probs=591.0
Q ss_pred cCHHHHHHHhCCCcCCCCC-ccHHHHHHHHHhcCCCCCCCCCCccHHHHHHHHH-hhhHHHHHHHHHHHHHHhhhcccCC
Q 003189 119 GGVEGIAEKLSTSITDGIS-TSEHLLNRRKEIYGINKFTESPARGFWVYVWEAL-HDMTLMILAVCALVSLVVGIATEGW 196 (840)
Q Consensus 119 ~gv~~l~~~l~~~~~~Gl~-~~~~~~~~r~~~~G~N~~~~~~~~~f~~~~~~~l-~~~~~~il~i~a~is~~~~~~~~~~ 196 (840)
..++++++.|+++...||+ +++ +++|++.||+|+++.++.+++|+.++++| +++++++|+++++++++++
T Consensus 7 ~~~~~v~~~l~t~~~~GLs~~~e--v~~r~~~~G~N~i~~~~~~s~~~~~l~~~~~~~~~~~L~~aa~ls~~~g------ 78 (884)
T TIGR01522 7 LSVEETCSKLQTDLQNGLNSSQE--ASHRRAFHGWNEFDVEEDESLWKKFLSQFVKNPLILLLIASAVISVFMG------ 78 (884)
T ss_pred CCHHHHHHHhCcCcccCCCcHHH--HHHHHHhcCCCcCCCCCCCCHHHHHHHHHhhChHHHHHHHHHHHHHHHc------
Confidence 3688999999999999999 555 99999999999999999999999999999 9999999999999998876
Q ss_pred CCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHhHhHhhhcCceEEEEECCeEEEEeccCCCCCcEEEecCCCcccccEEE
Q 003189 197 PKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLF 276 (840)
Q Consensus 197 ~~~~~d~~~i~~~illv~~v~~~~~~~~~~~~~~l~~~~~~~~v~V~RdG~~~~I~~~dLvvGDIV~l~~Gd~VPaDgvl 276 (840)
.|.|++.|+++++++++++.+.+|+.++..++|.+. .+.+++|+|||++++|+++||||||+|.|++||+|||||++
T Consensus 79 --~~~~~~~i~~~i~~~~~i~~~qe~~a~~~l~~L~~l-~~~~~~ViRdg~~~~I~~~eLv~GDiv~l~~Gd~IPaDg~i 155 (884)
T TIGR01522 79 --NIDDAVSITLAILIVVTVGFVQEYRSEKSLEALNKL-VPPECHLIREGKLEHVLASTLVPGDLVCLSVGDRVPADLRI 155 (884)
T ss_pred --chhhHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcc-CCCeeEEEECCEEEEEEHHHCccCCEEEecCCCEEeeeEEE
Confidence 588999998888889999999999999999988874 45689999999999999999999999999999999999999
Q ss_pred EeecceEEecccccCCCCccccCCCC-------------CeEEeccEEeeceEEEEEEEEcccchHHHHHHhhcCCCCCC
Q 003189 277 VSGFSVLINESSLTGESEPVNVNALN-------------PFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDE 343 (840)
Q Consensus 277 l~g~~l~VDES~LTGES~pv~k~~~~-------------~~l~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~~~ 343 (840)
++|+++.||||+|||||.|+.|.+++ +++|+||.|.+|+++++|++||.+|++|+|.+++++....+
T Consensus 156 i~g~~l~VDES~LTGES~pv~K~~~~~~~~~~~~~~~~~n~v~~GT~v~~G~~~~~V~~tG~~T~~gki~~~v~~~~~~k 235 (884)
T TIGR01522 156 VEAVDLSIDESNLTGETTPVSKVTAPIPAATNGDLAERSNIAFMGTLVRCGHGKGIVVGTGSNTEFGAVFKMMQAIEKPK 235 (884)
T ss_pred EEcCceEEEcccccCCCcceecccccccccccccccccCceEEeCCEEEeeeEEEEEEEecCccHHHHHHHHhccCCCCC
Confidence 99987899999999999999997542 58999999999999999999999999999999999988889
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhcccCCCccccCCcChHHHHHHHHHHHHHHHHhcCCchHHHHHHH
Q 003189 344 TPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLS 423 (840)
Q Consensus 344 tplq~~l~~~a~~~~~~~l~~a~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ai~ilvva~P~~Lplav~l~ 423 (840)
+|+|+.+++++.++++++++++++++++. ++. + . .+...+.+++++++++||||||+++|++
T Consensus 236 t~lq~~l~~l~~~~~~~~~~~~~~~~~~~---~~~-----~-------~---~~~~~~~~~v~llv~aiP~~Lp~~vt~~ 297 (884)
T TIGR01522 236 TPLQKSMDLLGKQLSLVSFGVIGVICLVG---WFQ-----G-------K---DWLEMFTISVSLAVAAIPEGLPIIVTVT 297 (884)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHh-----c-------C---CHHHHHHHHHHHHHHHccchHHHHHHHH
Confidence 99999999999999887766555444432 111 0 0 3567888999999999999999999999
Q ss_pred HHHHHHHHhccccccccchhhhccCCeeEEEecccCccccCceEEEEEEEcCeeeee-cCCCCC---------CCCCCCC
Q 003189 424 LAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEV-DNSKGT---------PAFGSSI 493 (840)
Q Consensus 424 l~~~~~~l~~~~ilvr~~~a~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~-~~~~~~---------~~~~~~~ 493 (840)
+++++++|+++|+++|+++++|+||++|+||||||||||+|+|+|.+++..+..... +..... .......
T Consensus 298 l~~~~~r~ak~~ilvk~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (884)
T TIGR01522 298 LALGVLRMSKKRAIVRKLPSVETLGSVNVICSDKTGTLTKNHMTVTKIWTSDGLHTMLNAVSLNQFGEVIVDGDVLHGFY 377 (884)
T ss_pred HHHHHHHHhhcCCcccchHHHHhccCccEEEecCccccccCeEEEEEEEecCceEeeccCCccCCCCccccccccccccc
Confidence 999999999999999999999999999999999999999999999999876543210 000000 0000111
Q ss_pred ChhHHHHHHHHHHhcCCceEEecCCCceeEcCChhhHHHHHHHHHcCCChHHHhhccceEEEecCCCCCceEEEEEEeC-
Q 003189 494 PASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELP- 572 (840)
Q Consensus 494 ~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~g~p~e~All~~~~~~~~~~~~~~~~~~i~~~~pF~s~~k~~~vv~~~~- 572 (840)
++...+++. ..+.|+++..... ..+..|||+|.|+++++...+.+ ..+..++.++.+||+|.+|+|+++++..
T Consensus 378 ~~~~~~~l~-~~~l~~~~~~~~~---~~~~~g~p~e~All~~~~~~~~~--~~~~~~~~~~~~pF~s~~k~m~v~~~~~~ 451 (884)
T TIGR01522 378 TVAVSRILE-AGNLCNNAKFRNE---ADTLLGNPTDVALIELLMKFGLD--DLRETYIRVAEVPFSSERKWMAVKCVHRQ 451 (884)
T ss_pred CHHHHHHHH-HHhhhCCCeecCC---CCCcCCChHHHHHHHHHHHcCcH--hHHhhCcEEeEeCCCCCCCeEEEEEEEcC
Confidence 223334443 3344444443322 12346899999999999877653 4455678899999999999999988753
Q ss_pred CCcEEEEEcCchHHHHHhcccccccCCceeeCCHHHHHHHHHHHHHHHHcccceeEEEEEEcCCCCCCCCCCCCCceeee
Q 003189 573 EGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCI 652 (840)
Q Consensus 573 ~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~glr~l~~A~~~~~~~~~~~~~~~~~~~~~l 652 (840)
++++++++||+||.|+..|++++..+|...+++++.++.+.+.+++|+++|+|++++||+++ +.+++|+
T Consensus 452 ~~~~~~~~KGape~il~~c~~~~~~~g~~~~l~~~~~~~i~~~~~~~a~~G~rvl~~A~~~~-----------~~~l~~l 520 (884)
T TIGR01522 452 DRSEMCFMKGAYEQVLKYCTYYQKKDGKTLTLTQQQRDVIQEEAAEMASAGLRVIAFASGPE-----------KGQLTFL 520 (884)
T ss_pred CCeEEEEEeCChHHHHHhhhhhhhcCCCeeeCCHHHHHHHHHHHHHHHhcCCEEEEEEEEcC-----------CCCeEEE
Confidence 56789999999999999999998878888899999999999999999999999999999864 2579999
Q ss_pred eeecccCCCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEe
Q 003189 653 GIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMAR 732 (840)
Q Consensus 653 g~~~~~D~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar 732 (840)
|+++|+||+||+++++|++|+++|++++|+|||+..||.++|+++||......+++|.+++.++++++.+.+++..||||
T Consensus 521 Gli~l~Dp~r~~~~~~i~~l~~~Gi~v~miTGD~~~tA~~ia~~~Gi~~~~~~~v~g~~l~~~~~~~l~~~~~~~~Vfar 600 (884)
T TIGR01522 521 GLVGINDPPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIARRLGMPSKTSQSVSGEKLDAMDDQQLSQIVPKVAVFAR 600 (884)
T ss_pred EEEeccCcchhHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCCceeEhHHhHhCCHHHHHHHhhcCeEEEE
Confidence 99999999999999999999999999999999999999999999999877778899999999999999999999999999
Q ss_pred cCcccHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEEecCCCcHHHHhhcCEEeccCCchHHHHHHHHHHHHHHH
Q 003189 733 SSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYIN 812 (840)
Q Consensus 733 ~~P~~K~~~V~~l~~~~g~~v~~~GDG~ND~~al~~Advgiamg~~g~~~ak~~aDivlldd~f~~i~~~i~~gR~~~~~ 812 (840)
++|+||..+|+.||+. |++|+|+|||.||+|||++||||||||.+|+++++++||++|+||||++|++++++||++|+|
T Consensus 601 ~~P~~K~~iv~~lq~~-g~~v~mvGDGvND~pAl~~AdVGia~g~~g~~va~~aaDivl~dd~~~~i~~~i~~gR~~~~n 679 (884)
T TIGR01522 601 ASPEHKMKIVKALQKR-GDVVAMTGDGVNDAPALKLADIGVAMGQTGTDVAKEAADMILTDDDFATILSAIEEGKGIFNN 679 (884)
T ss_pred CCHHHHHHHHHHHHHC-CCEEEEECCCcccHHHHHhCCeeEecCCCcCHHHHHhcCEEEcCCCHHHHHHHHHHHHHHHHH
Confidence 9999999999999998 999999999999999999999999999789999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhc
Q 003189 813 IQKFVQFQLTVNVVALIVNFSSACLT 838 (840)
Q Consensus 813 i~k~i~f~l~~N~~~l~~~~~~~~~~ 838 (840)
|+||++|+++.|+..+.+.+++.++.
T Consensus 680 i~k~i~~~l~~ni~~~~~~~~~~~~~ 705 (884)
T TIGR01522 680 IKNFITFQLSTSVAALSLIALATLMG 705 (884)
T ss_pred HHHHHHHHhhhhHHHHHHHHHHHHHc
Confidence 99999999999999998888777664
No 11
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=100.00 E-value=7.1e-112 Score=1013.87 Aligned_cols=617 Identities=26% Similarity=0.409 Sum_probs=541.6
Q ss_pred CCCccHHHHHHHHHhcCCCCCCCCCCccHHHHHHHHHhhhHHHHHHHHHHHHHHhhhcccCCCCCcchhHHHHHHHHHHH
Q 003189 135 GISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCALVSLVVGIATEGWPKGAHDGLGIVMSILLVV 214 (840)
Q Consensus 135 Gl~~~~~~~~~r~~~~G~N~~~~~~~~~f~~~~~~~l~~~~~~il~i~a~is~~~~~~~~~~~~~~~d~~~i~~~illv~ 214 (840)
||++++ +++|+++||+|+++. +.+++|+.++++|++++.++|+++++++++++ .|+|++.|++.+++..
T Consensus 1 GLs~~e--a~~r~~~~G~N~~~~-~~~~~~~~~~~~~~~~~~~lL~~aa~~s~~~~--------~~~~~~~i~~~~~i~~ 69 (755)
T TIGR01647 1 GLTSAE--AKKRLAKYGPNELPE-KKVSPLLKFLGFFWNPLSWVMEAAAIIAIALE--------NWVDFVIILGLLLLNA 69 (755)
T ss_pred CcCHHH--HHHHHHhcCCCCCCC-CCCCHHHHHHHHHhchHHHHHHHHHHHHHhhc--------chhhhhhhhhhhHHHH
Confidence 788876 999999999999987 45677899999999999999999999999876 4889998888888888
Q ss_pred HHHHHHHHHHHHHHhHhHhhhcCceEEEEECCeEEEEeccCCCCCcEEEecCCCcccccEEEEeecceEEecccccCCCC
Q 003189 215 FVTATSDYKQSLQFKDLDREKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESE 294 (840)
Q Consensus 215 ~v~~~~~~~~~~~~~~l~~~~~~~~v~V~RdG~~~~I~~~dLvvGDIV~l~~Gd~VPaDgvll~g~~l~VDES~LTGES~ 294 (840)
.+..+.+++.++..++|.+. .+.+++|+|||++++|+++||||||+|.|++||+|||||++++|+++.||||+|||||.
T Consensus 70 ~i~~~qe~~a~~~~~~L~~~-~~~~~~V~Rdg~~~~I~~~~Lv~GDiV~l~~Gd~IPaDg~vi~g~~~~VDeS~LTGES~ 148 (755)
T TIGR01647 70 TIGFIEENKAGNAVEALKQS-LAPKARVLRDGKWQEIPASELVPGDVVRLKIGDIVPADCRLFEGDYIQVDQAALTGESL 148 (755)
T ss_pred HHHHHHHHHHHHHHHHHHhh-CCCeEEEEECCEEEEEEhhhCcCCCEEEECCCCEEeceEEEEecCceEEEcccccCCcc
Confidence 88888888888888888764 45689999999999999999999999999999999999999999878999999999999
Q ss_pred ccccCCCCCeEEeccEEeeceEEEEEEEEcccchHHHHHHhhcCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003189 295 PVNVNALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQ 374 (840)
Q Consensus 295 pv~k~~~~~~l~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~~~tplq~~l~~~a~~~~~~~l~~a~~~~~v~~~ 374 (840)
|+.|..++ .+|+||.|.+|+++++|++||.+|++|+|.+++.+.+.+++|+|+.+++++.++.++.+++++++|++++.
T Consensus 149 PV~K~~~~-~v~aGT~v~~G~~~~~V~~tG~~T~~g~i~~lv~~~~~~~~~lq~~~~~i~~~~~~~~~~~~~i~~~~~~~ 227 (755)
T TIGR01647 149 PVTKKTGD-IAYSGSTVKQGEAEAVVTATGMNTFFGKAAALVQSTETGSGHLQKILSKIGLFLIVLIGVLVLIELVVLFF 227 (755)
T ss_pred ceEeccCC-eeeccCEEEccEEEEEEEEcCCccHHHHHHHHhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99998765 69999999999999999999999999999999999888889999999999999999888888777766532
Q ss_pred hHhhhcccCCCccccCCcChHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHhccccccccchhhhccCCeeEEE
Q 003189 375 GLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSIC 454 (840)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ai~ilvva~P~~Lplav~l~l~~~~~~l~~~~ilvr~~~a~E~lg~v~~I~ 454 (840)
.+ + .++...+.+++++++++|||+||+++|++++.++++|+|+|+++|+++++|+||++|+||
T Consensus 228 ~~-------~----------~~~~~~~~~~i~vlv~a~P~~Lp~~~~~~la~g~~r~ak~gilvk~l~alE~lg~v~~i~ 290 (755)
T TIGR01647 228 GR-------G----------ESFREGLQFALVLLVGGIPIAMPAVLSVTMAVGAAELAKKKAIVTRLTAIEELAGMDILC 290 (755)
T ss_pred Hc-------C----------CCHHHHHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHHhCCeEEcccHHHHhccCCcEEE
Confidence 10 0 035678889999999999999999999999999999999999999999999999999999
Q ss_pred ecccCccccCceEEEEEEEcCeeeeecCCCCCCCCCCCCChhHHHHHHHHHHhcCCceEEecCCCceeEcCChhhHHHHH
Q 003189 455 SDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILE 534 (840)
Q Consensus 455 ~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~g~p~e~All~ 534 (840)
||||||||+|+|+|.+++..+.. .+++ +++..+..++ . +.++||+|.|+++
T Consensus 291 ~DKTGTLT~~~~~v~~~~~~~~~---------------~~~~--~~l~~a~~~~-~-----------~~~~~pi~~Ai~~ 341 (755)
T TIGR01647 291 SDKTGTLTLNKLSIDEILPFFNG---------------FDKD--DVLLYAALAS-R-----------EEDQDAIDTAVLG 341 (755)
T ss_pred ecCCCccccCceEEEEEEecCCC---------------CCHH--HHHHHHHHhC-C-----------CCCCChHHHHHHH
Confidence 99999999999999998864321 0111 2232232222 1 1267999999999
Q ss_pred HHHHcCCChHHHhhccceEEEecCCCCCceEEEEEEeCC-CcEEEEEcCchHHHHHhcccccccCCceeeCCHHHHHHHH
Q 003189 535 FGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPE-GGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLN 613 (840)
Q Consensus 535 ~~~~~~~~~~~~~~~~~i~~~~pF~s~~k~~~vv~~~~~-~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~ 613 (840)
++.+.+ ..+..+++++.+||++.+|+|+++++.++ ++...++||+||.+++.|++. ++.+++++
T Consensus 342 ~~~~~~----~~~~~~~~~~~~pf~~~~k~~~~~v~~~~~g~~~~~~kGa~e~il~~c~~~-----------~~~~~~~~ 406 (755)
T TIGR01647 342 SAKDLK----EARDGYKVLEFVPFDPVDKRTEATVEDPETGKRFKVTKGAPQVILDLCDNK-----------KEIEEKVE 406 (755)
T ss_pred HHHHhH----HHHhcCceEEEeccCCCCCeEEEEEEeCCCceEEEEEeCChHHHHHhcCCc-----------HHHHHHHH
Confidence 886532 33456788899999999999999887654 666788999999999999742 34556788
Q ss_pred HHHHHHHHcccceeEEEEEEcCCCCCCCCCCCCCceeeeeeecccCCCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHH
Q 003189 614 ETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAI 693 (840)
Q Consensus 614 ~~~~~~~~~glr~l~~A~~~~~~~~~~~~~~~~~~~~~lg~~~~~D~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~i 693 (840)
+.+++++.+|+|++++||++ .+++++|+|+++|+||+||+++++|++|+++||+|+|+|||++.||.++
T Consensus 407 ~~~~~~~~~G~rvl~vA~~~-----------~e~~l~~~Gli~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~I 475 (755)
T TIGR01647 407 EKVDELASRGYRALGVARTD-----------EEGRWHFLGLLPLFDPPRHDTKETIERARHLGVEVKMVTGDHLAIAKET 475 (755)
T ss_pred HHHHHHHhCCCEEEEEEEEc-----------CCCCcEEEEEeeccCCChhhHHHHHHHHHHCCCeEEEECCCCHHHHHHH
Confidence 88999999999999999973 1368999999999999999999999999999999999999999999999
Q ss_pred HHHcCCccC---CCccccChhhhcCCHHHHhhhcCCceEEEecCcccHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCC
Q 003189 694 ARECGILTD---NGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEAD 770 (840)
Q Consensus 694 A~~~Gi~~~---~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~~V~~l~~~~g~~v~~~GDG~ND~~al~~Ad 770 (840)
|+++||... ...+.+|.+...++++++.+.+.++.||||++|+||+++|+.||++ |++|+|+|||+||+|||++||
T Consensus 476 A~~lGI~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfAr~~Pe~K~~iV~~lq~~-G~~VamvGDGvNDapAL~~Ad 554 (755)
T TIGR01647 476 ARRLGLGTNIYTADVLLKGDNRDDLPSGELGEMVEDADGFAEVFPEHKYEIVEILQKR-GHLVGMTGDGVNDAPALKKAD 554 (755)
T ss_pred HHHcCCCCCCcCHHHhcCCcchhhCCHHHHHHHHHhCCEEEecCHHHHHHHHHHHHhc-CCEEEEEcCCcccHHHHHhCC
Confidence 999999652 2234456666788899999999999999999999999999999999 999999999999999999999
Q ss_pred ccEEecCCCcHHHHhhcCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 003189 771 IGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLT 838 (840)
Q Consensus 771 vgiamg~~g~~~ak~~aDivlldd~f~~i~~~i~~gR~~~~~i~k~i~f~l~~N~~~l~~~~~~~~~~ 838 (840)
|||||| +|+|+||++||+||+||||++|++++++||++|+||+||++|+++.|+..+++.+++.++.
T Consensus 555 VGIAm~-~gtdvAkeaADivLl~d~l~~I~~ai~~gR~~~~ni~k~i~~~~~~n~~~~~~~~~~~l~~ 621 (755)
T TIGR01647 555 VGIAVA-GATDAARSAADIVLTEPGLSVIVDAILESRKIFQRMKSYVIYRIAETIRIVFFFGLLILIL 621 (755)
T ss_pred eeEEec-CCcHHHHHhCCEEEEcCChHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHh
Confidence 999999 8999999999999999999999999999999999999999999999999887777666543
No 12
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=100.00 E-value=1.1e-108 Score=1006.56 Aligned_cols=659 Identities=34% Similarity=0.495 Sum_probs=566.7
Q ss_pred HHHHHhhhHHHHHHHHHHHHHHhhhcccCC--CCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHhHhHhhhcCceEEEEE
Q 003189 167 VWEALHDMTLMILAVCALVSLVVGIATEGW--PKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVAR 244 (840)
Q Consensus 167 ~~~~l~~~~~~il~i~a~is~~~~~~~~~~--~~~~~d~~~i~~~illv~~v~~~~~~~~~~~~~~l~~~~~~~~v~V~R 244 (840)
++++|+++++++|++++++|+++++..++. ...|+|++.|++.+++...++.+.+++.++..++|.+ ..+.+++|+|
T Consensus 1 ~~~~f~~~~~~iL~~aa~ls~~~~~~~~~~~~~~~~~~~~~Il~vi~~~~~i~~~qe~~a~~~~~~L~~-~~~~~~~ViR 79 (917)
T TIGR01116 1 VLEQFEDLLVRILLLAACVSFVLAWFEEGEETVTAFVEPFVILLILVANAIVGVWQERNAEKAIEALKE-YESEHAKVLR 79 (917)
T ss_pred ChHHHhCHHHHHHHHHHHHHHHHhcccccccccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-cCCCceEEEE
Confidence 478999999999999999999998765333 2579999999999999999999999999999999987 4566899999
Q ss_pred CCeEEEEeccCCCCCcEEEecCCCcccccEEEEeecceEEecccccCCCCccccCCC------------CCeEEeccEEe
Q 003189 245 NGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNAL------------NPFLLSGTKVQ 312 (840)
Q Consensus 245 dG~~~~I~~~dLvvGDIV~l~~Gd~VPaDgvll~g~~l~VDES~LTGES~pv~k~~~------------~~~l~sGt~v~ 312 (840)
||++++|+++||||||+|.|++||+|||||++++|+++.||||+|||||.|+.|.++ ++++|+||.|.
T Consensus 80 dg~~~~I~~~~Lv~GDiv~l~~Gd~IPaD~~ll~~~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~~~~n~l~~GT~v~ 159 (917)
T TIGR01116 80 DGRWSVIKAKDLVPGDIVELAVGDKVPADIRVLSLKTLRVDQSILTGESVSVNKHTESVPDERAVNQDKKNMLFSGTLVV 159 (917)
T ss_pred CCEEEEEEHHHCCCCCEEEECCCCEeeccEEEEEecceEEEcccccCCCCcccccccccCccccCcccccceeeeCCEEe
Confidence 999999999999999999999999999999999998899999999999999999653 27899999999
Q ss_pred eceEEEEEEEEcccchHHHHHHhhcCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhcccCCCccccCCc
Q 003189 313 NGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGD 392 (840)
Q Consensus 313 ~G~~~~~V~~vG~~T~~g~i~~~~~~~~~~~tplq~~l~~~a~~~~~~~l~~a~~~~~v~~~~~~~~~~~~~~~~~~~~~ 392 (840)
+|+++++|++||.+|++|+|.+++.....++||+|+++++++.++.++.+++++++|++++..+... ..+ ..
T Consensus 160 ~G~~~~~V~~tG~~T~~gki~~~~~~~~~~~t~lq~~l~~~~~~l~~~~~~~~~i~~~~~~~~~~~~--~~~------~~ 231 (917)
T TIGR01116 160 AGKARGVVVRTGMSTEIGKIRDEMRAAEQEDTPLQKKLDEFGELLSKVIGLICILVWVINIGHFNDP--ALG------GG 231 (917)
T ss_pred cceEEEEEEEeCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc--ccc------ch
Confidence 9999999999999999999999999888889999999999999999888887777776554322110 000 01
Q ss_pred ChHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHhccccccccchhhhccCCeeEEEecccCccccCceEEEEEE
Q 003189 393 DALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKAC 472 (840)
Q Consensus 393 ~~~~~~~~~~~ai~ilvva~P~~Lplav~l~l~~~~~~l~~~~ilvr~~~a~E~lg~v~~I~~DKTGTLT~n~m~v~~~~ 472 (840)
....+..++..++++++++|||+||+++++++++++++|+++|++||+++++|+||++|+||||||||||+|+|+|.+++
T Consensus 232 ~~~~~~~~~~~~i~l~v~~iP~~Lp~~vti~l~~~~~~m~~~~ilvk~~~~iE~lg~v~~ic~DKTGTLT~n~m~v~~~~ 311 (917)
T TIGR01116 232 WIQGAIYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAKKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVCKVV 311 (917)
T ss_pred hHHHHHHHHHHHHhhhhhccccccHHHHHHHHHHHHHHHHHCCcEecCcHHHHhccCceEEEecCCccccCCeEEEEEEE
Confidence 11245667778899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EcCee------eeecCCCCCCCC---C-----CCCChhHHHHHHHHHHhcCCceEEecC-CCceeEcCChhhHHHHHHHH
Q 003189 473 ICEEI------KEVDNSKGTPAF---G-----SSIPASASKLLLQSIFNNTGGEVVIGE-GNKTEILGTPTETAILEFGL 537 (840)
Q Consensus 473 ~~~~~------~~~~~~~~~~~~---~-----~~~~~~~~~~l~~~i~~~~~~~~~~~~-~~~~~~~g~p~e~All~~~~ 537 (840)
..+.. +...+..+.+.. . ....+.....+......|+++.+..++ ++..+..|+|+|.||++++.
T Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lc~~~~~~~~~~~~~~~~~gdp~E~ALl~~~~ 391 (917)
T TIGR01116 312 ALDPSSSSLNEFCVTGTTYAPEGGVIKDDGPVAGGQDAGLEELATIAALCNDSSLDFNERKGVYEKVGEATEAALKVLVE 391 (917)
T ss_pred ecCCcccccceEEecCCccCCCccccccCCcccccchHHHHHHHHHHHhcCCCeeeccccCCceeeccChhHHHHHHHHH
Confidence 86532 111111111100 0 000122344455666677776665432 22344579999999999998
Q ss_pred HcCCChHH----------------HhhccceEEEecCCCCCceEEEEEEeCCCcEEEEEcCchHHHHHhcccccccCCce
Q 003189 538 LLGGDFQA----------------ERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGEV 601 (840)
Q Consensus 538 ~~~~~~~~----------------~~~~~~i~~~~pF~s~~k~~~vv~~~~~~~~~~~~KGa~e~il~~c~~~~~~~g~~ 601 (840)
+.|.+... .++.+++++.+||+|+||||+++++.+ +++.+++|||||.|++.|++++..+|..
T Consensus 392 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pF~s~rK~msviv~~~-~~~~~~~KGApe~il~~c~~~~~~~g~~ 470 (917)
T TIGR01116 392 KMGLPATKNGVSSKRRPALGCNSVWNDKFKKLATLEFSRDRKSMSVLCKPS-TGNKLFVKGAPEGVLERCTHILNGDGRA 470 (917)
T ss_pred HcCCCchhcccccccccccchhHHHHhhcceeeecccChhhCeEEEEEeeC-CcEEEEEcCChHHHHHhccceecCCCCe
Confidence 88765432 245677999999999999999998864 6688999999999999999988877888
Q ss_pred eeCCHHHHHHHHHHHHHHHH-cccceeEEEEEEcCCCCC-------CCCCCCCCceeeeeeecccCCCCcchHHHHHHHH
Q 003189 602 VPLNEAAVNHLNETIEKFAS-EALRTLCLACMEIGNEFS-------ADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICR 673 (840)
Q Consensus 602 ~~l~~~~~~~~~~~~~~~~~-~glr~l~~A~~~~~~~~~-------~~~~~~~~~~~~lg~~~~~D~lR~~~~~aI~~l~ 673 (840)
.|++++.++++.+.+++|++ +|+||+++|||+++.+.. ...+..|++++|+|+++++||+||+++++|+.|+
T Consensus 471 ~~l~~~~~~~i~~~~~~~a~~~GlRvl~~A~k~~~~~~~~~~~~~~~~~~~~e~~l~~lGl~~~~Dplr~~v~e~I~~l~ 550 (917)
T TIGR01116 471 VPLTDKMKNTILSVIKEMGTTKALRCLALAFKDIPDPREEDLLSDPANFEAIESDLTFIGVVGMLDPPRPEVADAIEKCR 550 (917)
T ss_pred eeCCHHHHHHHHHHHHHHHhhcCCeEEEEEEEECCccccccccccchhhhhhcCCcEEEEEeeeeCCCchhHHHHHHHHH
Confidence 99999999999999999999 999999999999864311 1113457899999999999999999999999999
Q ss_pred hCCCEEEEEcCCCHHHHHHHHHHcCCccCCC----ccccChhhhcCCHHHHhhhcCCceEEEecCcccHHHHHHHHHHhC
Q 003189 674 SAGITVRMVTGDNINTAKAIARECGILTDNG----IAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTL 749 (840)
Q Consensus 674 ~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~----~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~~V~~l~~~~ 749 (840)
++||+++|+|||+..||.++|+++||..++. .+++|+++..++++++...+++..||||++|+||.++|+.+|+.
T Consensus 551 ~aGI~v~miTGD~~~tA~~ia~~~gi~~~~~~v~~~~~~g~~l~~~~~~~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~- 629 (917)
T TIGR01116 551 TAGIRVIMITGDNKETAEAICRRIGIFSPDEDVTFKSFTGREFDEMGPAKQRAACRSAVLFSRVEPSHKSELVELLQEQ- 629 (917)
T ss_pred HCCCEEEEecCCCHHHHHHHHHHcCCCCCCccccceeeeHHHHhhCCHHHHHHhhhcCeEEEecCHHHHHHHHHHHHhc-
Confidence 9999999999999999999999999976543 47899999999999999999999999999999999999999988
Q ss_pred CCEEEEEcCCccCHHHhhhCCccEEecCCCcHHHHhhcCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003189 750 GEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALI 829 (840)
Q Consensus 750 g~~v~~~GDG~ND~~al~~Advgiamg~~g~~~ak~~aDivlldd~f~~i~~~i~~gR~~~~~i~k~i~f~l~~N~~~l~ 829 (840)
|++|+|+|||.||+|||++|||||||| +|++++|++||++++||||++|+++++|||++|+||+|+++|+++.|+..++
T Consensus 630 g~~va~iGDG~ND~~alk~AdVGia~g-~g~~~ak~aAD~vl~dd~f~~i~~~i~~GR~~~~ni~k~i~~~l~~ni~~~~ 708 (917)
T TIGR01116 630 GEIVAMTGDGVNDAPALKKADIGIAMG-SGTEVAKEASDMVLADDNFATIVAAVEEGRAIYNNMKQFIRYMISSNIGEVV 708 (917)
T ss_pred CCeEEEecCCcchHHHHHhCCeeEECC-CCcHHHHHhcCeEEccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHH
Confidence 999999999999999999999999999 9999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhh
Q 003189 830 VNFSSACL 837 (840)
Q Consensus 830 ~~~~~~~~ 837 (840)
+.+++.++
T Consensus 709 ~~~~~~~~ 716 (917)
T TIGR01116 709 CIFLTAAL 716 (917)
T ss_pred HHHHHHHH
Confidence 98887665
No 13
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=100.00 E-value=2.2e-104 Score=980.85 Aligned_cols=642 Identities=23% Similarity=0.332 Sum_probs=518.9
Q ss_pred CCCCCccHHHHHHHHHhcCCCCCCCCCCccHHHHHHHHHhhhHHHHHHHHHHHHHHhhhcccCCCCCcchhHHHHHHHHH
Q 003189 133 TDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCALVSLVVGIATEGWPKGAHDGLGIVMSILL 212 (840)
Q Consensus 133 ~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~~f~~~~~~~l~~~~~~il~i~a~is~~~~~~~~~~~~~~~d~~~i~~~ill 212 (840)
..||+.++ +.+|++.||.|.++.+ .++||+++++++.+|++++++++.++++.. +.|++++.|++.+++
T Consensus 137 ~~GLs~~e--~~~r~~~yG~N~i~~~-~~s~~~ll~~~~~~p~~i~~i~~~~l~~~~--------~~~~~~~~i~~i~~~ 205 (1054)
T TIGR01657 137 SNGLTTGD--IAQRKAKYGKNEIEIP-VPSFLELLKEEVLHPFYVFQVFSVILWLLD--------EYYYYSLCIVFMSST 205 (1054)
T ss_pred ccCCCHHH--HHHHHHhcCCCeeecC-CCCHHHHHHHHHhchHHHHHHHHHHHHHhh--------hhHHHHHHHHHHHHH
Confidence 46998876 9999999999999875 589999999999999998888876665532 257888888777666
Q ss_pred HHHHHHHHHHHHHHHHhHhHhhhcCceEEEEECCeEEEEeccCCCCCcEEEec--CCCcccccEEEEeecceEEeccccc
Q 003189 213 VVFVTATSDYKQSLQFKDLDREKKKITVQVARNGFRRKISIYDLLPGDIVHLC--MGDQVPADGLFVSGFSVLINESSLT 290 (840)
Q Consensus 213 v~~v~~~~~~~~~~~~~~l~~~~~~~~v~V~RdG~~~~I~~~dLvvGDIV~l~--~Gd~VPaDgvll~g~~l~VDES~LT 290 (840)
...++...+++..++.+++. ..+..++|+|||++++|+++||||||+|.|+ +||+|||||+|++|+ +.||||+||
T Consensus 206 ~~~~~~~~~~k~~~~L~~~~--~~~~~v~V~Rdg~~~~I~s~eLvpGDiv~l~~~~g~~iPaD~~ll~g~-~~VdES~LT 282 (1054)
T TIGR01657 206 SISLSVYQIRKQMQRLRDMV--HKPQSVIVIRNGKWVTIASDELVPGDIVSIPRPEEKTMPCDSVLLSGS-CIVNESMLT 282 (1054)
T ss_pred HHHHHHHHHHHHHHHHHHhh--cCCeeEEEEECCEEEEEEcccCCCCCEEEEecCCCCEecceEEEEeCc-EEEeccccc
Confidence 66555555554444444432 2356899999999999999999999999999 999999999999995 899999999
Q ss_pred CCCCccccCCC-----------------CCeEEeccEEee-------ceEEEEEEEEcccchHHHHHHhhcCCCCCCChH
Q 003189 291 GESEPVNVNAL-----------------NPFLLSGTKVQN-------GSCKMLVTTVGMRTQWGKLMATLSEGGDDETPL 346 (840)
Q Consensus 291 GES~pv~k~~~-----------------~~~l~sGt~v~~-------G~~~~~V~~vG~~T~~g~i~~~~~~~~~~~tpl 346 (840)
|||.|+.|.+. .+++|+||.|.+ |.++++|++||.+|..|++.+++......++++
T Consensus 283 GES~Pv~K~~~~~~~~~~~~~~~~~~~~~~~lf~GT~v~~~~~~~g~g~~~~vV~~TG~~T~~G~i~~~i~~~~~~~~~~ 362 (1054)
T TIGR01657 283 GESVPVLKFPIPDNGDDDEDLFLYETSKKHVLFGGTKILQIRPYPGDTGCLAIVVRTGFSTSKGQLVRSILYPKPRVFKF 362 (1054)
T ss_pred CCccceecccCCccccccccccccccccceEEEcCCEEEEEecCCCCCcEEEEEEeCCccccchHHHHHhhCCCCCCCch
Confidence 99999999641 347999999985 889999999999999999999998888888999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhcccCCCccccCCcChHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHH
Q 003189 347 QVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAF 426 (840)
Q Consensus 347 q~~l~~~a~~~~~~~l~~a~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ai~ilvva~P~~Lplav~l~l~~ 426 (840)
++.+.++...+.. ++++.+++++..++.. + .++...+..++++++++|||+||+++++++++
T Consensus 363 ~~~~~~~~~~l~~----~a~i~~i~~~~~~~~~----~----------~~~~~~~l~~l~iiv~~vP~~LP~~~ti~l~~ 424 (1054)
T TIGR01657 363 YKDSFKFILFLAV----LALIGFIYTIIELIKD----G----------RPLGKIILRSLDIITIVVPPALPAELSIGINN 424 (1054)
T ss_pred HHHHHHHHHHHHH----HHHHHHHHHHHHHHHc----C----------CcHHHHHHHHHHHHHhhcCchHHHHHHHHHHH
Confidence 8887766555443 3333333322221110 1 13567888899999999999999999999999
Q ss_pred HHHHHhccccccccchhhhccCCeeEEEecccCccccCceEEEEEEEcCeeeeecCCCCCCCCCCCCChhHHHHHHHHHH
Q 003189 427 AMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQSIF 506 (840)
Q Consensus 427 ~~~~l~~~~ilvr~~~a~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~ 506 (840)
++++|+|+|++||++.++|++|++|++|||||||||+|+|+|.+++..+........ ...........+...++
T Consensus 425 ~~~rL~k~~il~~~~~~ie~lG~v~vicfDKTGTLTen~m~v~~v~~~~~~~~~~~~------~~~~~~~~~~~~~~~~a 498 (1054)
T TIGR01657 425 SLARLKKKGIFCTSPFRINFAGKIDVCCFDKTGTLTEDGLDLRGVQGLSGNQEFLKI------VTEDSSLKPSITHKALA 498 (1054)
T ss_pred HHHHHHHCCEEEcCcccceecceeeEEEEcCCCCCccCCeeEEeEecccCccccccc------cccccccCchHHHHHHH
Confidence 999999999999999999999999999999999999999999999875432110000 00000011223445566
Q ss_pred hcCCceEEecCCCceeEcCChhhHHHHHHHHHc-CC--C--hHH----------HhhccceEEEecCCCCCceEEEEEEe
Q 003189 507 NNTGGEVVIGEGNKTEILGTPTETAILEFGLLL-GG--D--FQA----------ERQASKIVKVEPFNSVKKQMGVVIEL 571 (840)
Q Consensus 507 ~~~~~~~~~~~~~~~~~~g~p~e~All~~~~~~-~~--~--~~~----------~~~~~~i~~~~pF~s~~k~~~vv~~~ 571 (840)
.||+..... + +..|||+|.|+++++... .. + ... ....+++++.+||+|++|||+++++.
T Consensus 499 ~C~~~~~~~---~--~~~Gdp~E~al~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~il~~~pF~S~~krMsvvv~~ 573 (1054)
T TIGR01657 499 TCHSLTKLE---G--KLVGDPLDKKMFEATGWTLEEDDESAEPTSILAVVRTDDPPQELSIIRRFQFSSALQRMSVIVST 573 (1054)
T ss_pred hCCeeEEEC---C--EEecCHHHHHHHHhCCCEEECCCCcccccccccceeccCCCceEEEEEEEeecCCCCEEEEEEEE
Confidence 676654321 2 568999999999986311 00 0 000 02467889999999999999999987
Q ss_pred CC-CcEEEEEcCchHHHHHhcccccccCCceeeCCHHHHHHHHHHHHHHHHcccceeEEEEEEcCCCC-----CCCCCCC
Q 003189 572 PE-GGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEF-----SADAPIP 645 (840)
Q Consensus 572 ~~-~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~glr~l~~A~~~~~~~~-----~~~~~~~ 645 (840)
++ +.+++++|||||.|++.|+.. ..++.+.+.+++|+++|+||+++|||++++.. ..+++..
T Consensus 574 ~~~~~~~~~~KGApE~Il~~c~~~------------~~p~~~~~~~~~~a~~G~RVLalA~k~l~~~~~~~~~~~~r~~~ 641 (1054)
T TIGR01657 574 NDERSPDAFVKGAPETIQSLCSPE------------TVPSDYQEVLKSYTREGYRVLALAYKELPKLTLQKAQDLSRDAV 641 (1054)
T ss_pred cCCCeEEEEEECCHHHHHHHcCCc------------CCChhHHHHHHHHHhcCCEEEEEEEeecCccchhhhhhccHHHH
Confidence 54 467899999999999999841 12356788899999999999999999987421 1122456
Q ss_pred CCceeeeeeecccCCCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCC---------------------
Q 003189 646 TEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNG--------------------- 704 (840)
Q Consensus 646 ~~~~~~lg~~~~~D~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~--------------------- 704 (840)
|+|++|+|+++|+||+||+++++|++|+++||+++|+||||+.||.++|++|||..++.
T Consensus 642 E~~L~flGli~~~d~lr~~~~~~I~~l~~agi~v~miTGD~~~TA~~iA~~~gii~~~~~vi~~~~~~~~~~~~~~~~~~ 721 (1054)
T TIGR01657 642 ESNLTFLGFIVFENPLKPDTKEVIKELKRASIRTVMITGDNPLTAVHVARECGIVNPSNTLILAEAEPPESGKPNQIKFE 721 (1054)
T ss_pred hcCceEEEEEEEecCCCccHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCceEEEeecccccCCCCceEEEE
Confidence 88999999999999999999999999999999999999999999999999999975331
Q ss_pred --------------------------------ccccChhhhc---CCHHHHhhhcCCceEEEecCcccHHHHHHHHHHhC
Q 003189 705 --------------------------------IAIEGPEFRE---KSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTL 749 (840)
Q Consensus 705 --------------------------------~~~~g~~~~~---~~~~~~~~~~~~~~v~ar~~P~~K~~~V~~l~~~~ 749 (840)
.+++|+++.. +.++++.+.+.++.||||++|+||.++|+.||+.
T Consensus 722 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~itG~~l~~l~~~~~~~l~~~~~~~~VfAR~sP~qK~~iV~~lq~~- 800 (1054)
T TIGR01657 722 VIDSIPFASTQVEIPYPLGQDSVEDLLASRYHLAMSGKAFAVLQAHSPELLLRLLSHTTVFARMAPDQKETLVELLQKL- 800 (1054)
T ss_pred ecCccccccccccccCcccccchhhhcccceEEEEEcHHHHHHHHhhHHHHHHHHhcCeEEEecCHHHHHHHHHHHHhC-
Confidence 4677877765 4667889999999999999999999999999998
Q ss_pred CCEEEEEcCCccCHHHhhhCCccEEecCCCcHHHHhhcCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003189 750 GEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALI 829 (840)
Q Consensus 750 g~~v~~~GDG~ND~~al~~Advgiamg~~g~~~ak~~aDivlldd~f~~i~~~i~~gR~~~~~i~k~i~f~l~~N~~~l~ 829 (840)
|++|+|||||+||+||||+|||||||| .+ |+ ..+||+++++|||++|+++|++||+++.|+++.++|.+.||++..+
T Consensus 801 g~~V~m~GDG~ND~~ALK~AdVGIam~-~~-da-s~AA~f~l~~~~~~~I~~~I~eGR~~l~~~~~~~~~~~~~~~~~~~ 877 (1054)
T TIGR01657 801 DYTVGMCGDGANDCGALKQADVGISLS-EA-EA-SVAAPFTSKLASISCVPNVIREGRCALVTSFQMFKYMALYSLIQFY 877 (1054)
T ss_pred CCeEEEEeCChHHHHHHHhcCcceeec-cc-cc-eeecccccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999998 33 54 4889999999999999999999999999999999999999998755
Q ss_pred HHHH
Q 003189 830 VNFS 833 (840)
Q Consensus 830 ~~~~ 833 (840)
..++
T Consensus 878 ~~~~ 881 (1054)
T TIGR01657 878 SVSI 881 (1054)
T ss_pred HHHH
Confidence 5443
No 14
>KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.1e-104 Score=882.16 Aligned_cols=695 Identities=32% Similarity=0.464 Sum_probs=595.0
Q ss_pred HhcCHHHHHHHhCCCcCCCCCccHHHHHHHHHhcCCCCCCCCCCccHHHHHHHHHhhhHHHHHHHHHHHHHHhhhccc--
Q 003189 117 VHGGVEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCALVSLVVGIATE-- 194 (840)
Q Consensus 117 ~~~gv~~l~~~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~~f~~~~~~~l~~~~~~il~i~a~is~~~~~~~~-- 194 (840)
+...++.|++.+.+++..||+... +.+++.+-|+|.+++|+..|-|..+.+++++..-++++++|+++++......
T Consensus 40 H~~~~~eL~~r~~t~~~~Glt~~~--A~~~L~rdG~NaL~Ppk~t~~wikf~kq~f~~~~ill~~~a~l~~~~y~~~~s~ 117 (1019)
T KOG0203|consen 40 HKLSVDELCERYGTSVSQGLTSQE--AAEKLARDGPNALTPPKTTPEWIKFLRQLFGGFSILLWIGAILCFVAYGIQAST 117 (1019)
T ss_pred ccCCHHHHHHHhcCChhhcccHHH--HHhhhccCCCCCCCCCCCChHHHHHHHHHhhhHHHHHHHHHHHHHHHHhhhccc
Confidence 445799999999999999999977 8999999999999999999999999999999999999999998875443211
Q ss_pred --C-CCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHhHhHh---hhcCceEEEEECCeEEEEeccCCCCCcEEEecCCC
Q 003189 195 --G-WPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDR---EKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGD 268 (840)
Q Consensus 195 --~-~~~~~~d~~~i~~~illv~~v~~~~~~~~~~~~~~l~~---~~~~~~v~V~RdG~~~~I~~~dLvvGDIV~l~~Gd 268 (840)
. .....|-+. ++..+++++.+-.|.|+.+-.+... ...+..++|+|||+...+...||||||+|.++-||
T Consensus 118 ~~~~~~~nly~gi----iL~~vv~vtg~~~~~qe~ks~~im~sF~~l~P~~~~ViRdg~k~~i~~eelVvGD~v~vk~Gd 193 (1019)
T KOG0203|consen 118 EDDPSDDNLYLGI----VLAAVVIVTGLFSYYQEAKSSKIMDSFKNLVPQQALVIRDGEKMTINAEELVVGDLVEVKGGD 193 (1019)
T ss_pred CCCCCCcceEEEE----EEEEEEEEEecCCCccchhhHHHHHHHhccchhhheeeecceeEEechhhcccccceeeccCC
Confidence 1 122334333 2233444555556666666555444 34567899999999999999999999999999999
Q ss_pred cccccEEEEeecceEEecccccCCCCccccCC---------CCCeEEeccEEeeceEEEEEEEEcccchHHHHHHhhcCC
Q 003189 269 QVPADGLFVSGFSVLINESSLTGESEPVNVNA---------LNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEG 339 (840)
Q Consensus 269 ~VPaDgvll~g~~l~VDES~LTGES~pv~k~~---------~~~~l~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~ 339 (840)
+||||.+++++..+++|+|+|||||+|.+.++ ..++-|.+|.+++|.++++|.+||.+|.+|+|..+...-
T Consensus 194 rVPADiRiis~~g~~vdnsslTGesEP~~~~~~~t~~~~~Et~Ni~f~st~~veG~~~givi~tGd~Tv~G~ia~l~~~~ 273 (1019)
T KOG0203|consen 194 RVPADIRIISATGCKVDNSSLTGESEPQTRSPEFTHENPLETRNIAFFSTNCVEGTGRGIVIATGDRTVMGRIASLASGL 273 (1019)
T ss_pred cccceeEEEEecceeEeccccccccCCccCCccccccCchhheeeeeeeeEEecceEEEEEEecCCceEEeehhhhhccC
Confidence 99999999999999999999999999998752 245689999999999999999999999999999998887
Q ss_pred CCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhcccCCCccccCCcChHHHHHHHHHHHHHHHHhcCCchHHH
Q 003189 340 GDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLA 419 (840)
Q Consensus 340 ~~~~tplq~~l~~~a~~~~~~~l~~a~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ai~ilvva~P~~Lpla 419 (840)
+..++|++..++++..++..+++++++..|++-++- + ..++.++.+.+.++|+.+|+|||..
T Consensus 274 ~~~~t~~~~ei~~fi~~it~vAi~~~i~fF~~~~~~--------g----------y~~l~avv~~i~iivAnvPeGL~~t 335 (1019)
T KOG0203|consen 274 EDGKTPIAKEIEHFIHIITGVAIFLGISFFILALIL--------G----------YEWLRAVVFLIGIIVANVPEGLLAT 335 (1019)
T ss_pred CCCCCcchhhhhchHHHHHHHHHHHHHHHHHHHHhh--------c----------chhHHHhhhhheeEEecCcCCccce
Confidence 888999999999999999888888887777543321 1 1466777778899999999999999
Q ss_pred HHHHHHHHHHHHhccccccccchhhhccCCeeEEEecccCccccCceEEEEEEEcCeeeeecCCCCCCCCCCCCChhHHH
Q 003189 420 VTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASK 499 (840)
Q Consensus 420 v~l~l~~~~~~l~~~~ilvr~~~a~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 499 (840)
+|.+++...++|++++++||++.+.|++|+.++||+|||||||+|+|+|.++|.++.....+.............+....
T Consensus 336 vTv~LtltakrMa~Knc~vknLeavetlGsts~I~SDktGTlTqnrMtVahlw~d~~i~~~d~~~~~~~~~~~~~~~~~~ 415 (1019)
T KOG0203|consen 336 VTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHLWFDNQIHEADTTEDQSGQSFDKSSATFI 415 (1019)
T ss_pred ehhhHHHHHHHHhhceeEEeeeeheeecccceeEeecceeeEEecceEEEeeccCCceeeeechhhhhcccccccCchHH
Confidence 99999999999999999999999999999999999999999999999999999998876544322211222222234455
Q ss_pred HHHHHHHhcCCceEEecCCC----ceeEcCChhhHHHHHHHHHcCCChHHHhhccceEEEecCCCCCceEEEEEEeCC--
Q 003189 500 LLLQSIFNNTGGEVVIGEGN----KTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPE-- 573 (840)
Q Consensus 500 ~l~~~i~~~~~~~~~~~~~~----~~~~~g~p~e~All~~~~~~~~~~~~~~~~~~i~~~~pF~s~~k~~~vv~~~~~-- 573 (840)
.+...++.|+.+.+..++.+ +....|++.|.||++|+...-.+....|+..+.+...||||.+|+.-.+.+..+
T Consensus 416 ~l~r~~~lCn~a~~~~gq~dvPv~kk~v~G~~se~ALlk~~e~~~~~~~~~R~~~~kv~eipfNSt~Kyqlsih~~~d~~ 495 (1019)
T KOG0203|consen 416 ALSRIATLCNRAVFKPGQDDVPVLKRDVAGDASEVALLKFIELILGSVMELRERNPKVAEIPFNSTNKYQLSIHETEDPS 495 (1019)
T ss_pred HHHHHHHHhCcceecccccCCceeeeeccCCHHHHHHHHHHHHhcchHHHHHHhhHHhhcCCcccccceEEEEEecCCCC
Confidence 56677788888887766554 445689999999999998776677888999999999999999999877776544
Q ss_pred -CcEEEEEcCchHHHHHhcccccccCCceeeCCHHHHHHHHHHHHHHHHcccceeEEEEEEcCCCC--------CCCCCC
Q 003189 574 -GGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEF--------SADAPI 644 (840)
Q Consensus 574 -~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~glr~l~~A~~~~~~~~--------~~~~~~ 644 (840)
..+.+.+|||||.++++|+.++ .+|+..|++++.++.+++...++...|-|+++|+++.++++. .+..+.
T Consensus 496 ~~~~~l~mKGape~il~~CSTi~-i~g~e~pld~~~~~~f~~ay~~lg~~GerVlgF~~~~l~~~~~p~~~~f~~d~~n~ 574 (1019)
T KOG0203|consen 496 DPRFLLVMKGAPERILDRCSTIL-INGEEKPLDEKLKEAFQEAYLELGGLGERVLGFCDLELPDEKFPRGFQFDTDDVNF 574 (1019)
T ss_pred CccceeeecCChHHHHhhcccee-ecCCCCCcCHHHHHHHHHHHHHhhhcchHHHHHHHHhcchhcCCCceEeecCCCCC
Confidence 4677889999999999999876 578889999999999999999999999999999999887551 122356
Q ss_pred CCCceeeeeeecccCCCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCC--------------------
Q 003189 645 PTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNG-------------------- 704 (840)
Q Consensus 645 ~~~~~~~lg~~~~~D~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~-------------------- 704 (840)
+..++.|+|++.+-||+|+.+++|+..||.|||+|+|+|||++.||+++|+..||..++.
T Consensus 575 p~~nl~FlGl~s~idPPR~~vP~Av~~CrsAGIkvimVTgdhpiTAkAiA~~vgIi~~~~et~e~~a~r~~~~v~~vn~~ 654 (1019)
T KOG0203|consen 575 PTDNLRFLGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKSVGIISEGSETVEDIAKRLNIPVEQVNSR 654 (1019)
T ss_pred cchhccccchhhccCCCcccCchhhhhhhhhCceEEEEecCccchhhhhhhheeeecCCchhhhhhHHhcCCcccccCcc
Confidence 678999999999999999999999999999999999999999999999999999875432
Q ss_pred ----ccccChhhhcCCHHHHhhhcCCc--eEEEecCcccHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEEecCC
Q 003189 705 ----IAIEGPEFREKSDEELSKLIPKI--QVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIA 778 (840)
Q Consensus 705 ----~~~~g~~~~~~~~~~~~~~~~~~--~v~ar~~P~~K~~~V~~l~~~~g~~v~~~GDG~ND~~al~~Advgiamg~~ 778 (840)
.|+.|.++..++++++++++.+- .||||.||+||+.+|+.+|++ |.+|+++|||+||+||||.||||||||++
T Consensus 655 ~a~a~VihG~eL~~~~~~qld~il~nh~eIVFARTSPqQKLiIVe~cQr~-GaiVaVTGDGVNDsPALKKADIGVAMGia 733 (1019)
T KOG0203|consen 655 DAKAAVIHGSELPDMSSEQLDELLQNHQEIVFARTSPQQKLIIVEGCQRQ-GAIVAVTGDGVNDSPALKKADIGVAMGIA 733 (1019)
T ss_pred ccceEEEecccccccCHHHHHHHHHhCCceEEEecCccceEEeEhhhhhc-CcEEEEeCCCcCCChhhcccccceeeccc
Confidence 67899999999999999988332 499999999999999999999 99999999999999999999999999999
Q ss_pred CcHHHHhhcCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 003189 779 GTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACL 837 (840)
Q Consensus 779 g~~~ak~~aDivlldd~f~~i~~~i~~gR~~~~~i~k~i~f~l~~N~~~l~~~~~~~~~ 837 (840)
|+|++|++||+||+||||++||..+++||-+|+|+||.|.|.|+.|+-.+..-+++.++
T Consensus 734 GSDvsKqAADmILLDDNFASIVtGVEEGRLiFDNLKKsIAYTLTsNipEI~PfL~fi~~ 792 (1019)
T KOG0203|consen 734 GSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLLFILF 792 (1019)
T ss_pred cchHHHhhcceEEecCcchhheeecccceehhhhHHHHHHHHHHhcchhHhHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999988776555443
No 15
>PRK14010 potassium-transporting ATPase subunit B; Provisional
Probab=100.00 E-value=2.3e-96 Score=851.14 Aligned_cols=549 Identities=24% Similarity=0.357 Sum_probs=444.3
Q ss_pred HHhhhHHHHHHHHHHHHHHhhhccc--CC-CCCcchhHHHHHHHHHHHHHHHHHH----HHHHHHHhHhHhhhcCceEE-
Q 003189 170 ALHDMTLMILAVCALVSLVVGIATE--GW-PKGAHDGLGIVMSILLVVFVTATSD----YKQSLQFKDLDREKKKITVQ- 241 (840)
Q Consensus 170 ~l~~~~~~il~i~a~is~~~~~~~~--~~-~~~~~d~~~i~~~illv~~v~~~~~----~~~~~~~~~l~~~~~~~~v~- 241 (840)
.+++|..++++++++++++++.+.+ +. ...+++++.|++.+++.+++..+.+ ++.+++.+.|.+..++.+++
T Consensus 29 ~~~~p~~~il~~aa~ls~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~g~~~E~~ae~ra~~~~~~L~~~~~~~~a~~ 108 (673)
T PRK14010 29 MIKNPIMFVVEVGMLLALGLTIYPDLFHQESVSRLYVFSIFIILLLTLVFANFSEALAEGRGKAQANALRQTQTEMKARR 108 (673)
T ss_pred HHHChHHHHHHHHHHHHHHHHHHhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEE
Confidence 5678899999999999998887532 11 1123567777777777777776664 34444455555544443565
Q ss_pred EEECCeEEEEeccCCCCCcEEEecCCCcccccEEEEeecceEEecccccCCCCccccCCC---CCeEEeccEEeeceEEE
Q 003189 242 VARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNAL---NPFLLSGTKVQNGSCKM 318 (840)
Q Consensus 242 V~RdG~~~~I~~~dLvvGDIV~l~~Gd~VPaDgvll~g~~l~VDES~LTGES~pv~k~~~---~~~l~sGt~v~~G~~~~ 318 (840)
|.|||++++|++++|+|||+|.+++||+|||||++++|+. .||||+|||||.|+.|..+ ++ +|+||.|.+|++++
T Consensus 109 v~rdg~~~~I~a~eLv~GDiV~v~~Gd~IPaDG~vieG~~-~VDESaLTGES~PV~K~~g~d~~~-V~aGT~v~~G~~~i 186 (673)
T PRK14010 109 IKQDGSYEMIDASDLKKGHIVRVATGEQIPNDGKVIKGLA-TVDESAITGESAPVIKESGGDFDN-VIGGTSVASDWLEV 186 (673)
T ss_pred EEeCCEEEEEEHHHcCCCCEEEECCCCcccCCeEEEEcce-EEecchhcCCCCceeccCCCccCe-eecCceeecceEEE
Confidence 6799999999999999999999999999999999999975 9999999999999999877 66 99999999999999
Q ss_pred EEEEEcccchHHHHHHhhcCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhcccCCCccccCCcChHHHH
Q 003189 319 LVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEIL 398 (840)
Q Consensus 319 ~V~~vG~~T~~g~i~~~~~~~~~~~tplq~~l~~~a~~~~~~~l~~a~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (840)
+|+++|.+|++|+|.+++++++.++||+|..+..+...+. +.++++++++..+.. +. .+.
T Consensus 187 ~Vta~g~~T~lgki~~lve~a~~~ktp~e~~l~~l~~~l~-----ii~l~~~~~~~~~~~----------~~-----~~~ 246 (673)
T PRK14010 187 EITSEPGHSFLDKMIGLVEGATRKKTPNEIALFTLLMTLT-----IIFLVVILTMYPLAK----------FL-----NFN 246 (673)
T ss_pred EEEEecccCHHHHHHHHHhhccccCCHHHHHHHHHHHHHh-----HHHHHHHHHHHHHHh----------hc-----cHH
Confidence 9999999999999999999999899999977665443322 222222222110000 00 122
Q ss_pred HHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHhccccccccchhhhccCCeeEEEecccCccccCceEEEEEEEcCeee
Q 003189 399 EFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIK 478 (840)
Q Consensus 399 ~~~~~ai~ilvva~P~~Lplav~l~l~~~~~~l~~~~ilvr~~~a~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~ 478 (840)
..+.++++++|++|||+||.+++++++.++++|+|+|+++|+++++|+||++|+||||||||||+|++.++++...+..
T Consensus 247 ~~~~~~val~V~~IP~aL~~~~~~~~~~g~~r~ak~gvLvk~~~avE~lg~v~vI~~DKTGTLT~Gn~~~~~~~~~~~~- 325 (673)
T PRK14010 247 LSIAMLIALAVCLIPTTIGGLLSAIGIAGMDRVTQFNILAKSGRSVETCGDVNVLILDKTGTITYGNRMADAFIPVKSS- 325 (673)
T ss_pred HHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhhCCEEEeCcHHHHHhhCCCEEEEeCCCcCCCCCeEEEEEEeCCCc-
Confidence 3566788888899999999999999999999999999999999999999999999999999999988777765432110
Q ss_pred eecCCCCCCCCCCCCChhHHHHHHHHHHhcCCceEEecCCCceeEcCChhhHHHHHHHHHcCCChHHHhhccceEEEecC
Q 003189 479 EVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPF 558 (840)
Q Consensus 479 ~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~g~p~e~All~~~~~~~~~~~~~~~~~~i~~~~pF 558 (840)
+..+++.. ...++.. +.||+++|+++++.+.+.+.... ..+.+||
T Consensus 326 -----------------~~~~ll~~-a~~~~~~------------s~~P~~~AIv~~a~~~~~~~~~~-----~~~~~pF 370 (673)
T PRK14010 326 -----------------SFERLVKA-AYESSIA------------DDTPEGRSIVKLAYKQHIDLPQE-----VGEYIPF 370 (673)
T ss_pred -----------------cHHHHHHH-HHHhcCC------------CCChHHHHHHHHHHHcCCCchhh-----hcceecc
Confidence 11223322 2222211 45999999999998776553221 1235899
Q ss_pred CCCCceEEEEEEeCCCcEEEEEcCchHHHHHhcccccccCCceeeCCHHHHHHHHHHHHHHHHcccceeEEEEEEcCCCC
Q 003189 559 NSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEF 638 (840)
Q Consensus 559 ~s~~k~~~vv~~~~~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~glr~l~~A~~~~~~~~ 638 (840)
++++|+|++.+. + +.++||+++.+++.|+. +|...+. .+.+..++++++|+|+++++
T Consensus 371 ~~~~k~~gv~~~---g--~~i~kGa~~~il~~~~~----~g~~~~~------~~~~~~~~~a~~G~~~l~v~-------- 427 (673)
T PRK14010 371 TAETRMSGVKFT---T--REVYKGAPNSMVKRVKE----AGGHIPV------DLDALVKGVSKKGGTPLVVL-------- 427 (673)
T ss_pred ccccceeEEEEC---C--EEEEECCHHHHHHHhhh----cCCCCch------HHHHHHHHHHhCCCeEEEEE--------
Confidence 999999998742 2 24569999999999984 2222221 25566778999999999875
Q ss_pred CCCCCCCCCceeeeeeecccCCCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHH
Q 003189 639 SADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDE 718 (840)
Q Consensus 639 ~~~~~~~~~~~~~lg~~~~~D~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~ 718 (840)
.|++++|+++++||+|||++++|++||++||+++|+||||+.||.++|+++||..
T Consensus 428 --------~~~~~lG~i~l~Dp~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~elGI~~----------------- 482 (673)
T PRK14010 428 --------EDNEILGVIYLKDVIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEAGVDR----------------- 482 (673)
T ss_pred --------ECCEEEEEEEeecCCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCce-----------------
Confidence 3578999999999999999999999999999999999999999999999999974
Q ss_pred HHhhhcCCceEEEecCcccHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEEecCCCcHHHHhhcCEEeccCCchH
Q 003189 719 ELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFST 798 (840)
Q Consensus 719 ~~~~~~~~~~v~ar~~P~~K~~~V~~l~~~~g~~v~~~GDG~ND~~al~~Advgiamg~~g~~~ak~~aDivlldd~f~~ 798 (840)
++||++|+||.++|+.+|++ |++|+|||||+||+|||++|||||||| +|+|+||++||+|++||||++
T Consensus 483 ----------v~A~~~PedK~~iV~~lQ~~-G~~VaMtGDGvNDAPALa~ADVGIAMg-sGTdvAkeAADiVLldd~ls~ 550 (673)
T PRK14010 483 ----------FVAECKPEDKINVIREEQAK-GHIVAMTGDGTNDAPALAEANVGLAMN-SGTMSAKEAANLIDLDSNPTK 550 (673)
T ss_pred ----------EEcCCCHHHHHHHHHHHHhC-CCEEEEECCChhhHHHHHhCCEEEEeC-CCCHHHHHhCCEEEcCCCHHH
Confidence 99999999999999999999 999999999999999999999999999 999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 003189 799 IVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSAC 836 (840)
Q Consensus 799 i~~~i~~gR~~~~~i~k~i~f~l~~N~~~l~~~~~~~~ 836 (840)
|++++++||++|.|++|++.|.++.|+..++..+.+.|
T Consensus 551 Iv~av~~gR~i~~n~~~~~~f~~~~~~~~~~~i~~a~~ 588 (673)
T PRK14010 551 LMEVVLIGKQLLMTRGSLTTFSIANDIAKYFAILPAMF 588 (673)
T ss_pred HHHHHHHHHHHHHHHHHHHheeeeccHHHHHHHHHHHH
Confidence 99999999999999999999999999987666555433
No 16
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=100.00 E-value=7.1e-95 Score=839.45 Aligned_cols=554 Identities=25% Similarity=0.348 Sum_probs=450.6
Q ss_pred HHHhhhHHHHHHHHHHHHHHhhhccc---C---CCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHhHhHhhhcCceEEE
Q 003189 169 EALHDMTLMILAVCALVSLVVGIATE---G---WPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQV 242 (840)
Q Consensus 169 ~~l~~~~~~il~i~a~is~~~~~~~~---~---~~~~~~d~~~i~~~illv~~v~~~~~~~~~~~~~~l~~~~~~~~v~V 242 (840)
.+|+++.++++++++++++++++... + +..+|..++.+++.+++..++.++.+++.+++++.|.+..++..++|
T Consensus 29 ~~~~~p~~~vl~~~a~ls~~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~~~~~e~~ae~ra~~~~~sL~~l~~~~~a~v 108 (679)
T PRK01122 29 VQIRNPVMFVVEVGSILTTILTIAPLLFQSGGPAGFNLAITLWLWFTVLFANFAEALAEGRGKAQADSLRGAKKDTFARK 108 (679)
T ss_pred HHhhChHHHHHHHHHHHHHHHHhhhhccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeEEE
Confidence 46789999999999999999886432 1 11233333444444444445555677777777888877555557999
Q ss_pred EECCe-EEEEeccCCCCCcEEEecCCCcccccEEEEeecceEEecccccCCCCccccCCCC--CeEEeccEEeeceEEEE
Q 003189 243 ARNGF-RRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNALN--PFLLSGTKVQNGSCKML 319 (840)
Q Consensus 243 ~RdG~-~~~I~~~dLvvGDIV~l~~Gd~VPaDgvll~g~~l~VDES~LTGES~pv~k~~~~--~~l~sGt~v~~G~~~~~ 319 (840)
+|||+ +++|++++|++||+|.+++||+|||||++++|. ..||||+|||||.|+.|..++ +.+|+||.|.+|+++++
T Consensus 109 ir~g~~~~~V~~~eL~~GDiV~v~~Gd~IPaDG~vieG~-a~VDESaLTGES~PV~K~~G~~~~~V~aGT~v~~G~~~i~ 187 (679)
T PRK01122 109 LREPGAAEEVPATELRKGDIVLVEAGEIIPADGEVIEGV-ASVDESAITGESAPVIRESGGDFSSVTGGTRVLSDWIVIR 187 (679)
T ss_pred EECCCEEEEEEHHHcCCCCEEEEcCCCEEEEEEEEEEcc-EEEEcccccCCCCceEeCCCCccCeEEeceEEEeeeEEEE
Confidence 99988 899999999999999999999999999999997 599999999999999998654 35999999999999999
Q ss_pred EEEEcccchHHHHHHhhcCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhcccCCCccccCCcChHHHHH
Q 003189 320 VTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILE 399 (840)
Q Consensus 320 V~~vG~~T~~g~i~~~~~~~~~~~tplq~~l~~~a~~~~~~~l~~a~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (840)
|+++|.+|++|+|.+++++++.++||+|..++.+...+..+.+++.+..+.+ .++ .+. . .
T Consensus 188 Vta~g~~S~lgki~~lve~a~~~ktp~e~al~~l~~~l~~i~l~~~~~~~~~---~~~------------~g~---~--~ 247 (679)
T PRK01122 188 ITANPGESFLDRMIALVEGAKRQKTPNEIALTILLAGLTIIFLLVVATLPPF---AAY------------SGG---A--L 247 (679)
T ss_pred EEEecccCHHHHHHHHHHhccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHH---HHH------------hCc---h--H
Confidence 9999999999999999999999999999888877665554333222211111 111 010 1 1
Q ss_pred HHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHhccccccccchhhhccCCeeEEEecccCccccCceEEEEEEEcCeeee
Q 003189 400 FFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKE 479 (840)
Q Consensus 400 ~~~~ai~ilvva~P~~Lplav~l~l~~~~~~l~~~~ilvr~~~a~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~ 479 (840)
.+.++++++|++|||+|+.+++++...++++|+++|+++|+++++|+||++|+||||||||||+|+|++++++..+..
T Consensus 248 ~l~~~iallV~aiP~alg~l~~~i~i~g~~r~ak~gvLvk~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~~~~~-- 325 (679)
T PRK01122 248 SITVLVALLVCLIPTTIGGLLSAIGIAGMDRVLQANVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEFLPVPGV-- 325 (679)
T ss_pred HHHHHHHHHHHcccchhhhHHHHHHHHHHHHHhcCCeeecCchHHHHhcCCCEEEEeCCCCCcCCcEEEEEEEeCCCC--
Confidence 577889999999999999999999999999999999999999999999999999999999999999999988653221
Q ss_pred ecCCCCCCCCCCCCChhHHHHHHHHHHhcCCceEEecCCCceeEcCChhhHHHHHHHHH-cCCChHHHhhccceEEEecC
Q 003189 480 VDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLL-LGGDFQAERQASKIVKVEPF 558 (840)
Q Consensus 480 ~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~g~p~e~All~~~~~-~~~~~~~~~~~~~i~~~~pF 558 (840)
++ +.+...++.++.+ +.||..+|+++++.. .+.+.. +..++..+.+||
T Consensus 326 --------------~~---~~ll~~a~~~s~~------------s~hP~~~AIv~~a~~~~~~~~~--~~~~~~~~~~pF 374 (679)
T PRK01122 326 --------------TE---EELADAAQLSSLA------------DETPEGRSIVVLAKQRFNLRER--DLQSLHATFVPF 374 (679)
T ss_pred --------------CH---HHHHHHHHHhcCC------------CCCchHHHHHHHHHhhcCCCch--hhccccceeEee
Confidence 11 1122333333221 458999999999876 343321 122456778999
Q ss_pred CCCCceEEEEEEeCCCcEEEEEcCchHHHHHhcccccccCCceeeCCHHHHHHHHHHHHHHHHcccceeEEEEEEcCCCC
Q 003189 559 NSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEF 638 (840)
Q Consensus 559 ~s~~k~~~vv~~~~~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~glr~l~~A~~~~~~~~ 638 (840)
++.+++|++.+. + +.++||++|.+++.|+. +|... .+++++.+++++++|+|++++|+
T Consensus 375 ~s~~~~~gv~~~---g--~~~~kGa~e~il~~~~~----~g~~~------~~~~~~~~~~~a~~G~~~l~va~------- 432 (679)
T PRK01122 375 SAQTRMSGVDLD---G--REIRKGAVDAIRRYVES----NGGHF------PAELDAAVDEVARKGGTPLVVAE------- 432 (679)
T ss_pred cCcCceEEEEEC---C--EEEEECCHHHHHHHHHh----cCCcC------hHHHHHHHHHHHhCCCcEEEEEE-------
Confidence 999998887542 2 57899999999999963 22222 24567788899999999999983
Q ss_pred CCCCCCCCCceeeeeeecccCCCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHH
Q 003189 639 SADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDE 718 (840)
Q Consensus 639 ~~~~~~~~~~~~~lg~~~~~D~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~ 718 (840)
+++++|+++++||+|||++++|++||++||+++|+||||+.||.+||+++||.+
T Consensus 433 ---------~~~~lG~i~l~D~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~elGId~----------------- 486 (679)
T PRK01122 433 ---------DNRVLGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVDD----------------- 486 (679)
T ss_pred ---------CCeEEEEEEEeccCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCcE-----------------
Confidence 578999999999999999999999999999999999999999999999999964
Q ss_pred HHhhhcCCceEEEecCcccHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEEecCCCcHHHHhhcCEEeccCCchH
Q 003189 719 ELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFST 798 (840)
Q Consensus 719 ~~~~~~~~~~v~ar~~P~~K~~~V~~l~~~~g~~v~~~GDG~ND~~al~~Advgiamg~~g~~~ak~~aDivlldd~f~~ 798 (840)
++||++|+||+++|+.+|++ |++|+|||||+||+|||++|||||||| +|+|+||++||+|++||||++
T Consensus 487 ----------v~A~~~PedK~~iV~~lQ~~-G~~VaMtGDGvNDAPALa~ADVGIAMg-sGTdvAkeAADiVLldd~~s~ 554 (679)
T PRK01122 487 ----------FLAEATPEDKLALIRQEQAE-GRLVAMTGDGTNDAPALAQADVGVAMN-SGTQAAKEAGNMVDLDSNPTK 554 (679)
T ss_pred ----------EEccCCHHHHHHHHHHHHHc-CCeEEEECCCcchHHHHHhCCEeEEeC-CCCHHHHHhCCEEEeCCCHHH
Confidence 99999999999999999999 999999999999999999999999999 999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 003189 799 IVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACL 837 (840)
Q Consensus 799 i~~~i~~gR~~~~~i~k~i~f~l~~N~~~l~~~~~~~~~ 837 (840)
|+++++|||++.-.--..-.|++. |-++-.++++-++|
T Consensus 555 Iv~av~~GR~~~~tr~~~~~f~~~-n~~~~~~~i~p~~~ 592 (679)
T PRK01122 555 LIEVVEIGKQLLMTRGALTTFSIA-NDVAKYFAIIPAMF 592 (679)
T ss_pred HHHHHHHHHHHHhhhHhhhhhhHH-HHHHHHHHHHHHHH
Confidence 999999999999777777888877 66654444444443
No 17
>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.1e-95 Score=842.89 Aligned_cols=651 Identities=25% Similarity=0.326 Sum_probs=501.4
Q ss_pred hhccchhhhHHHHHhhhhhhhhHhHhhhhhhhhhhcccCCCC-ccccccccccCCcccChhhhhhhhccCCh---hHHHH
Q 003189 42 TANLSKRFEAEAIRRSNQEKFRVAVLVSQAALQFIHGLNLSS-EYTVPEEVAASGFQICPDELGSIVEGHDI---KKLKV 117 (840)
Q Consensus 42 ~~~~~~~~e~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~---~~l~~ 117 (840)
++.|..+.| .+.+.+++++++||+.++++.+.|++. ... ...+...++..||..............+. ..+.+
T Consensus 13 Ca~C~~~ie-~l~~~~gV~~~~vn~~t~~~~v~~~~~--~~~~~~~~~~~v~~~gy~~~~~~~~~~~~~~~~~~~~~~~~ 89 (713)
T COG2217 13 CAACASRIE-ALNKLPGVEEARVNLATERATVVYDPE--EVDLPADIVAAVEKAGYSARLTAALADPAEAEARLLRELLR 89 (713)
T ss_pred cHHHHHHHH-HHhcCCCeeEEEeecccceEEEEeccc--ccccHHHHHHHHHhcCccccccccccchhhhhhhhhhhHHH
Confidence 446778888 899999999999999999999999765 233 56788889999998765111111111110 11222
Q ss_pred hcCHHHHHHHhC----CCcCCCCCccHHHHHHHHHhcCCCCCCCCCCccHHHHHHHHHhhhHHHHH--HH-HHHHHHHhh
Q 003189 118 HGGVEGIAEKLS----TSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMIL--AV-CALVSLVVG 190 (840)
Q Consensus 118 ~~gv~~l~~~l~----~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~~f~~~~~~~l~~~~~~il--~i-~a~is~~~~ 190 (840)
...+.++..... .....|. . ...+......-......+.|||+.+|+.++.....|. +. +++.+++++
T Consensus 90 ~~~i~~~~~~~~~~~~~~~~~~~--~---~~~~~~~~l~~~v~~~~g~~f~~~a~~~l~~~~~~md~Lv~la~~~A~~~s 164 (713)
T COG2217 90 RLIIAGLLTLPLLLLSLGLLLGA--F---LLPWVSFLLATPVLFYGGWPFYRGAWRALRRGRLNMDTLVALATIGAYAYS 164 (713)
T ss_pred HHHHHHHHHHHHHHHHHHhhcch--h---hHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHH
Confidence 222333332111 1111111 0 1111111110000112578899999999998865542 22 222333444
Q ss_pred hcccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHhHhHh------hhcCceEEEEE-CCeEEEEeccCCCCCcEEE
Q 003189 191 IATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDR------EKKKITVQVAR-NGFRRKISIYDLLPGDIVH 263 (840)
Q Consensus 191 ~~~~~~~~~~~d~~~i~~~illv~~v~~~~~~~~~~~~~~l~~------~~~~~~v~V~R-dG~~~~I~~~dLvvGDIV~ 263 (840)
.+..-+. .||+..++++.++++ ++|.+.+...+..+ .+.+..+++++ ||+.++|+++||++||+|.
T Consensus 165 ~~~~~~~-~yf~~aa~ii~l~~~------G~~LE~~a~~ra~~ai~~L~~l~p~~A~~~~~~~~~~~v~v~~v~~GD~v~ 237 (713)
T COG2217 165 LYATLFP-VYFEEAAMLIFLFLL------GRYLEARAKGRARRAIRALLDLAPKTATVVRGDGEEEEVPVEEVQVGDIVL 237 (713)
T ss_pred HHHHhhh-hHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHccCCCEEEEEecCCcEEEEEHHHCCCCCEEE
Confidence 3321111 678877776665554 77877777665333 24567887776 5668999999999999999
Q ss_pred ecCCCcccccEEEEeecceEEecccccCCCCccccCCCCCeEEeccEEeeceEEEEEEEEcccchHHHHHHhhcCCCCCC
Q 003189 264 LCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDE 343 (840)
Q Consensus 264 l~~Gd~VPaDgvll~g~~l~VDES~LTGES~pv~k~~~~~~l~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~~~ 343 (840)
++|||+||+||++++|++ .||||+|||||.|+.|.+++. |++||.|.+|..+++|+++|.+|.+++|.+++++++..|
T Consensus 238 VrpGE~IPvDG~V~~G~s-~vDeS~iTGEs~PV~k~~Gd~-V~aGtiN~~G~l~i~vt~~~~dt~la~Ii~LVe~Aq~~K 315 (713)
T COG2217 238 VRPGERIPVDGVVVSGSS-SVDESMLTGESLPVEKKPGDE-VFAGTVNLDGSLTIRVTRVGADTTLARIIRLVEEAQSSK 315 (713)
T ss_pred ECCCCEecCCeEEEeCcE-EeecchhhCCCCCEecCCCCE-EeeeEEECCccEEEEEEecCccCHHHHHHHHHHHHhhCC
Confidence 999999999999999998 999999999999999999987 999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhcccCCCccccCCcChHHHHHHHHHHHHHHHHhcCCchHHHHHHH
Q 003189 344 TPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLS 423 (840)
Q Consensus 344 tplq~~l~~~a~~~~~~~l~~a~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ai~ilvva~P~~Lplav~l~ 423 (840)
+|.|+..|+++.+|+++++++++++|++|.+..- .++...+..+++++|++|||+|.+++|++
T Consensus 316 a~iqrlaDr~a~~fvp~vl~ia~l~f~~w~~~~~-----------------~~~~~a~~~a~avLVIaCPCALgLAtP~a 378 (713)
T COG2217 316 APIQRLADRVASYFVPVVLVIAALTFALWPLFGG-----------------GDWETALYRALAVLVIACPCALGLATPTA 378 (713)
T ss_pred chHHHHHHHHHHccHHHHHHHHHHHHHHHHHhcC-----------------CcHHHHHHHHHhheeeeCccHHHhHHHHH
Confidence 9999999999999999999999999987643210 03556889999999999999999999999
Q ss_pred HHHHHHHHhccccccccchhhhccCCeeEEEecccCccccCceEEEEEEEcCeeeeecCCCCCCCCCCCCChhHHHHHHH
Q 003189 424 LAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQ 503 (840)
Q Consensus 424 l~~~~~~l~~~~ilvr~~~a~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 503 (840)
+..++.+.+++|+|+|+..++|+++++|+|+||||||||+|+|+|+++...+. + .++.+.+.
T Consensus 379 i~~g~g~aA~~GILiK~g~~LE~l~~v~tvvFDKTGTLT~G~p~v~~v~~~~~--~--------------e~~~L~la-- 440 (713)
T COG2217 379 ILVGIGRAARRGILIKGGEALERLAKVDTVVFDKTGTLTEGKPEVTDVVALDG--D--------------EDELLALA-- 440 (713)
T ss_pred HHHHHHHHHhCceEEeChHHHHhhccCCEEEEeCCCCCcCCceEEEEEecCCC--C--------------HHHHHHHH--
Confidence 99999999999999999999999999999999999999999999999876533 0 12334332
Q ss_pred HHHhcCCceEEecCCCceeEcCChhhHHHHHHHHHcCCC-hHHHhhccceEEEecCCCCCceEEEEEEeCCCcEEEEEcC
Q 003189 504 SIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGD-FQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKG 582 (840)
Q Consensus 504 ~i~~~~~~~~~~~~~~~~~~~g~p~e~All~~~~~~~~~-~~~~~~~~~i~~~~pF~s~~k~~~vv~~~~~~~~~~~~KG 582 (840)
. .++ ..+.||+.+|+++++...+.. .+. .+.+| -.|+..+..+.. +.-|
T Consensus 441 -A------alE-------~~S~HPiA~AIv~~a~~~~~~~~~~-------~~~i~------G~Gv~~~v~g~~---v~vG 490 (713)
T COG2217 441 -A------ALE-------QHSEHPLAKAIVKAAAERGLPDVED-------FEEIP------GRGVEAEVDGER---VLVG 490 (713)
T ss_pred -H------HHH-------hcCCChHHHHHHHHHHhcCCCCccc-------eeeec------cCcEEEEECCEE---EEEc
Confidence 2 122 227899999999988776521 110 11111 123322332322 3337
Q ss_pred chHHHHHhcccccccCCceeeCCHHHHHHHHHHHHHHHHcccceeEEEEEEcCCCCCCCCCCCCCceeeeeeecccCCCC
Q 003189 583 ASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMR 662 (840)
Q Consensus 583 a~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~glr~l~~A~~~~~~~~~~~~~~~~~~~~~lg~~~~~D~lR 662 (840)
++..+.+. +...+ . ..+..+.+..+|..++.++ .|..++|++++.|++|
T Consensus 491 ~~~~~~~~--------~~~~~--~-----~~~~~~~~~~~G~t~v~va----------------~dg~~~g~i~~~D~~R 539 (713)
T COG2217 491 NARLLGEE--------GIDLP--L-----LSERIEALESEGKTVVFVA----------------VDGKLVGVIALADELR 539 (713)
T ss_pred CHHHHhhc--------CCCcc--c-----hhhhHHHHHhcCCeEEEEE----------------ECCEEEEEEEEeCCCC
Confidence 76554321 11111 1 3445667778888777776 4568999999999999
Q ss_pred cchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCcccHHHHH
Q 003189 663 PGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLV 742 (840)
Q Consensus 663 ~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~~V 742 (840)
|+++++|++||+.|+++.|+||||..+|+++|+++||.. |+|.+.|+||.++|
T Consensus 540 ~~a~~aI~~L~~~Gi~~~mLTGDn~~~A~~iA~~lGId~---------------------------v~AellPedK~~~V 592 (713)
T COG2217 540 PDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKELGIDE---------------------------VRAELLPEDKAEIV 592 (713)
T ss_pred hhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcChHh---------------------------heccCCcHHHHHHH
Confidence 999999999999999999999999999999999999965 99999999999999
Q ss_pred HHHHHhCCCEEEEEcCCccCHHHhhhCCccEEecCCCcHHHHhhcCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003189 743 KHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLT 822 (840)
Q Consensus 743 ~~l~~~~g~~v~~~GDG~ND~~al~~Advgiamg~~g~~~ak~~aDivlldd~f~~i~~~i~~gR~~~~~i~k~i~f~l~ 822 (840)
+.||++ |++|+|+|||+||+|||++|||||||| +|+|+|+++||++|++||+..++++++.+|+++.+||||+.|++.
T Consensus 593 ~~l~~~-g~~VamVGDGINDAPALA~AdVGiAmG-~GtDvA~eaADvvL~~~dL~~v~~ai~lsr~t~~~IkqNl~~A~~ 670 (713)
T COG2217 593 RELQAE-GRKVAMVGDGINDAPALAAADVGIAMG-SGTDVAIEAADVVLMRDDLSAVPEAIDLSRATRRIIKQNLFWAFG 670 (713)
T ss_pred HHHHhc-CCEEEEEeCCchhHHHHhhcCeeEeec-CCcHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999998 999999999999999999999999999 799999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHH
Q 003189 823 VNVVALIVNFSS 834 (840)
Q Consensus 823 ~N~~~l~~~~~~ 834 (840)
||+++++++..+
T Consensus 671 yn~~~iplA~~g 682 (713)
T COG2217 671 YNAIAIPLAAGG 682 (713)
T ss_pred HHHHHHHHHHHh
Confidence 999999999875
No 18
>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase. This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.
Probab=100.00 E-value=5e-93 Score=882.42 Aligned_cols=663 Identities=25% Similarity=0.339 Sum_probs=529.8
Q ss_pred cCCCCCCCCCCccH---HHHHHHHHhhhHHHHHHHHHHHHHHhhhcccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHH
Q 003189 150 YGINKFTESPARGF---WVYVWEALHDMTLMILAVCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSL 226 (840)
Q Consensus 150 ~G~N~~~~~~~~~f---~~~~~~~l~~~~~~il~i~a~is~~~~~~~~~~~~~~~d~~~i~~~illv~~v~~~~~~~~~~ 226 (840)
|..|.+...+...+ ++.+|++|+.+.++++++++++++++.+... +....+++++++++++++.++.++.
T Consensus 1 ~~~N~i~tskY~~~~flp~~l~~qf~~~~N~yfl~i~ilq~ip~~s~~-------~~~t~~~pL~~v~~~~~~~~~~ed~ 73 (1057)
T TIGR01652 1 FCSNKISTTKYTVLTFLPKNLFEQFKRFANLYFLVVALLQQVPILSPT-------YRGTSIVPLAFVLIVTAIKEAIEDI 73 (1057)
T ss_pred CCCCcccCccCcchhhhHHHHHHHHHHHhhHHHHHHHHHHcCCCcCCC-------CccHhHHhHHHHHHHHHHHHHHHHH
Confidence 56788877665554 5899999999999999999999998876532 2334566778888899999999999
Q ss_pred HHhHhHhhhcCceEEEEEC-CeEEEEeccCCCCCcEEEecCCCcccccEEEEeecc----eEEecccccCCCCccccCCC
Q 003189 227 QFKDLDREKKKITVQVARN-GFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFS----VLINESSLTGESEPVNVNAL 301 (840)
Q Consensus 227 ~~~~l~~~~~~~~v~V~Rd-G~~~~I~~~dLvvGDIV~l~~Gd~VPaDgvll~g~~----l~VDES~LTGES~pv~k~~~ 301 (840)
++++.++..++..++|+|+ |++++|+++||+|||+|.|++||+|||||+++++++ +.||||+|||||.|+.|...
T Consensus 74 ~r~~~d~~~n~~~~~v~~~~~~~~~i~~~~l~~GDiv~l~~g~~iPaD~~ll~ss~~~g~~~v~~s~l~GEs~~~~k~~~ 153 (1057)
T TIGR01652 74 RRRRRDKEVNNRLTEVLEGHGQFVEIPWKDLRVGDIVKVKKDERIPADLLLLSSSEPDGVCYVETANLDGETNLKLRQAL 153 (1057)
T ss_pred HHHHhHHHHhCcEEEEECCCCcEEEeeeecccCCCEEEEcCCCcccceEEEEeccCCCceEEEEeeccCCeecceEeecc
Confidence 9999999888899999996 899999999999999999999999999999999654 89999999999999988421
Q ss_pred -----------------------------------------------CCeEEeccEEee-ceEEEEEEEEcccchHHHHH
Q 003189 302 -----------------------------------------------NPFLLSGTKVQN-GSCKMLVTTVGMRTQWGKLM 333 (840)
Q Consensus 302 -----------------------------------------------~~~l~sGt~v~~-G~~~~~V~~vG~~T~~g~i~ 333 (840)
++++++||.+.+ |++.++|++||.+|.+++
T Consensus 154 ~~~~~~~~~~~~~~~~~~i~~~~p~~~l~~F~G~~~~~~~~~~~l~~~N~l~rGs~l~nt~~~~gvVvyTG~~Tk~~~-- 231 (1057)
T TIGR01652 154 EETQKMLDEDDIKNFSGEIECEQPNASLYSFQGNMTINGDRQYPLSPDNILLRGCTLRNTDWVIGVVVYTGHDTKLMR-- 231 (1057)
T ss_pred hhhhccCChhhHhhceEEEEEcCCCCcceEEEEEEEECCCCcccCCHHHhHhcCCEecCCCeEEEEEEEEchhhhhhh--
Confidence 256889999998 999999999999996654
Q ss_pred HhhcCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhcccCCCccccC-----CcChHHHHHHHHHHHHHH
Q 003189 334 ATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWS-----GDDALEILEFFAIAVTIV 408 (840)
Q Consensus 334 ~~~~~~~~~~tplq~~l~~~a~~~~~~~l~~a~~~~~v~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~ai~il 408 (840)
.......++++++++++++..++..+.++++++++++.. ++........|... ......++..|..++.++
T Consensus 232 -n~~~~~~k~s~le~~ln~~~~~l~~~~i~l~~i~~i~~~---~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~L~ 307 (1057)
T TIGR01652 232 -NATQAPSKRSRLEKELNFLIIILFCLLFVLCLISSVGAG---IWNDAHGKDLWYIRLDVSERNAAANGFFSFLTFLILF 307 (1057)
T ss_pred -cCCCCcccccHHHHHHhhHHHHHHHHHHHHHHHHHHHHH---heecccCCCccceecCcccccchhHHHHHHHHHHHHH
Confidence 455566678999999999988887776666665554321 11110001112110 011123444667788899
Q ss_pred HHhcCCchHHHHHHHHHHHH------HHHhcc----ccccccchhhhccCCeeEEEecccCccccCceEEEEEEEcCeee
Q 003189 409 VVAVPEGLPLAVTLSLAFAM------KKMMND----KALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIK 478 (840)
Q Consensus 409 vva~P~~Lplav~l~l~~~~------~~l~~~----~ilvr~~~a~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~ 478 (840)
+.++|++||..++++.+..+ .+|.++ +++||+.+++|+||++++||+|||||||+|+|++.++++++..+
T Consensus 308 ~~~IPisL~v~l~l~~~~~~~~i~~D~~m~~~~~~~~~~vr~~~~~E~LG~v~~I~sDKTGTLT~N~M~~~~~~i~g~~y 387 (1057)
T TIGR01652 308 SSLIPISLYVSLELVKSVQAYFINSDLQMYHEKTDTPASVRTSNLNEELGQVEYIFSDKTGTLTQNIMEFKKCSIAGVSY 387 (1057)
T ss_pred hhhcceeeeehHHHHHHHHHHHHhhhhhhhccccCCcceeecCCChHHhcCeeEEEEcCCCceeeeeEEEEEEEECCEEe
Confidence 99999999999999999998 788875 49999999999999999999999999999999999999988766
Q ss_pred eecCCC---------C--CC-C----CC-----------------CCCChhHHHHHHHHHHhcCCceEEecCCC---cee
Q 003189 479 EVDNSK---------G--TP-A----FG-----------------SSIPASASKLLLQSIFNNTGGEVVIGEGN---KTE 522 (840)
Q Consensus 479 ~~~~~~---------~--~~-~----~~-----------------~~~~~~~~~~l~~~i~~~~~~~~~~~~~~---~~~ 522 (840)
...... . .+ . .. .....+....+..+++.||+.....++++ ...
T Consensus 388 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~lC~~v~~~~~~~~~~~~~y 467 (1057)
T TIGR01652 388 GDGFTEIKDAIRERLGSYVENENSMLVESKGFTFVDPRLVDLLKTNKPNAKRINEFFLALALCHTVVPEFNDDGPEEITY 467 (1057)
T ss_pred cCCcchHHHHhhhcccccccccccccccccccccCcHHHHHhhhcCCchhHHHHHHHHHHHhcCcccccccCCCCCceEE
Confidence 421100 0 00 0 00 00001112334556777777665532221 223
Q ss_pred EcCChhhHHHHHHHHHcCCChHH--------------HhhccceEEEecCCCCCceEEEEEEeCCCcEEEEEcCchHHHH
Q 003189 523 ILGTPTETAILEFGLLLGGDFQA--------------ERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIIL 588 (840)
Q Consensus 523 ~~g~p~e~All~~~~~~~~~~~~--------------~~~~~~i~~~~pF~s~~k~~~vv~~~~~~~~~~~~KGa~e~il 588 (840)
..++|+|.|+++++...|+.+.. ....+++++.+||+|+||||+++++.+++++.+++|||||.|+
T Consensus 468 ~~~sp~E~ALl~~a~~~g~~~~~~~~~~~~~~i~~~~~~~~~~il~~~pF~s~rKrmSviv~~~~~~~~l~~KGA~e~il 547 (1057)
T TIGR01652 468 QAASPDEAALVKAARDVGFVFFERTPKSISLLIEMHGETKEYEILNVLEFNSDRKRMSVIVRNPDGRIKLLCKGADTVIF 547 (1057)
T ss_pred EccCCcHHHHHHHHHHCCCEEEEecCCceEEEEEeCCCEEEEEEEEecccCCCCCeEEEEEEeCCCeEEEEEeCcHHHHH
Confidence 46999999999999988875432 2236889999999999999999999888889999999999999
Q ss_pred HhcccccccCCceeeCCHHHHHHHHHHHHHHHHcccceeEEEEEEcCCCCCC--------------C--------CCCCC
Q 003189 589 AACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSA--------------D--------APIPT 646 (840)
Q Consensus 589 ~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~glr~l~~A~~~~~~~~~~--------------~--------~~~~~ 646 (840)
++|++ .+++.++.+.+.+++|+.+|+||+++|||.++++... + .+..|
T Consensus 548 ~~~~~----------~~~~~~~~~~~~~~~~a~~GlRtL~~A~k~l~~~e~~~~~~~~~~a~~~~~~r~~~~~~~~~~iE 617 (1057)
T TIGR01652 548 KRLSS----------GGNQVNEETKEHLENYASEGLRTLCIAYRELSEEEYEEWNEEYNEASTALTDREEKLDVVAESIE 617 (1057)
T ss_pred HHhhc----------cchhHHHHHHHHHHHHHHcCCcEEEEEEEECCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHH
Confidence 99974 1234567788999999999999999999998753100 0 02357
Q ss_pred CceeeeeeecccCCCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCC----------------------
Q 003189 647 EGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNG---------------------- 704 (840)
Q Consensus 647 ~~~~~lg~~~~~D~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~---------------------- 704 (840)
++++|+|+++++||+||+++++|+.|++|||++||+|||+.+||.+||++|||..++.
T Consensus 618 ~~L~~lG~~gieD~lq~~v~etI~~L~~AGIkv~mlTGD~~~TA~~IA~~~~ii~~~~~~~~i~~~~~~~~~~~~~~i~~ 697 (1057)
T TIGR01652 618 KDLILLGATAIEDKLQEGVPETIELLRQAGIKIWVLTGDKVETAINIGYSCRLLSRNMEQIVITSESLDATRSVEAAIKF 697 (1057)
T ss_pred hcCEEEEEEEEhhhhhhccHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCeEEEEecCchhhhHHHHHHHHH
Confidence 8999999999999999999999999999999999999999999999999999986542
Q ss_pred -------------------ccccChhhhcCCHH----HHhhhcCCc--eEEEecCcccHHHHHHHHHHhCCCEEEEEcCC
Q 003189 705 -------------------IAIEGPEFREKSDE----ELSKLIPKI--QVMARSSPMDKHTLVKHLRTTLGEVVAVTGDG 759 (840)
Q Consensus 705 -------------------~~~~g~~~~~~~~~----~~~~~~~~~--~v~ar~~P~~K~~~V~~l~~~~g~~v~~~GDG 759 (840)
++++|+++..+.++ ++.+++.+. .|+||++|+||.++|+.+|+..|++|+|+|||
T Consensus 698 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vV~aR~sP~qK~~IV~~lk~~~~~~vl~iGDG 777 (1057)
T TIGR01652 698 GLEGTSEEFNNLGDSGNVALVIDGKSLGYALDEELEKEFLQLALKCKAVICCRVSPSQKADVVRLVKKSTGKTTLAIGDG 777 (1057)
T ss_pred HHHHHHHhhhhhccCCceEEEEccHHHHHHHhhHHHHHHHHHHhhCCEEEEeCCCHHHHHHHHHHHHhcCCCeEEEEeCC
Confidence 36778777754433 344455444 49999999999999999998658999999999
Q ss_pred ccCHHHhhhCCccEEecCCCcH--HHHhhcCEEeccCCchHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 003189 760 TNDAPALHEADIGLAMGIAGTE--VAKESADVIILDDNFSTIVTVA-KWGRSVYINIQKFVQFQLTVNVVALIVNFSSAC 836 (840)
Q Consensus 760 ~ND~~al~~Advgiamg~~g~~--~ak~~aDivlldd~f~~i~~~i-~~gR~~~~~i~k~i~f~l~~N~~~l~~~~~~~~ 836 (840)
.||+|||++|||||+ +.|+| .|+++||++|.+ |..|.+++ .+||++|.|+++++.|.++.|++.+++.|++++
T Consensus 778 ~ND~~mlk~AdVGIg--i~g~eg~qA~~aaD~~i~~--F~~L~~lll~~GR~~~~r~~~~i~~~~~kn~~~~~~~~~~~~ 853 (1057)
T TIGR01652 778 ANDVSMIQEADVGVG--ISGKEGMQAVMASDFAIGQ--FRFLTKLLLVHGRWSYKRISKMILYFFYKNLIFAIIQFWYSF 853 (1057)
T ss_pred CccHHHHhhcCeeeE--ecChHHHHHHHhhhhhhhh--HHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999995 46777 589999999986 99999997 779999999999999999999999999999888
Q ss_pred hcC
Q 003189 837 LTG 839 (840)
Q Consensus 837 ~~g 839 (840)
++|
T Consensus 854 ~~~ 856 (1057)
T TIGR01652 854 YNG 856 (1057)
T ss_pred HHc
Confidence 654
No 19
>TIGR01497 kdpB K+-transporting ATPase, B subunit. One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.
Probab=100.00 E-value=9.5e-91 Score=803.00 Aligned_cols=545 Identities=26% Similarity=0.367 Sum_probs=450.3
Q ss_pred HHHhhhHHHHHHHHHHHHHHhhhcc--cC---CCCCcchhH---HHHHHHHHHHHHHHHHHHHHHHHHhHhHhhhcCceE
Q 003189 169 EALHDMTLMILAVCALVSLVVGIAT--EG---WPKGAHDGL---GIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITV 240 (840)
Q Consensus 169 ~~l~~~~~~il~i~a~is~~~~~~~--~~---~~~~~~d~~---~i~~~illv~~v~~~~~~~~~~~~~~l~~~~~~~~v 240 (840)
.+|+|+.++++++++++++++++.. .+ ....||++. .+++.+++..++.++.+++.++++++|.+..++..+
T Consensus 28 ~~~~~p~~~il~~~a~is~~l~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~g~~~e~~ae~ra~~~~~~L~~~~~~~~a 107 (675)
T TIGR01497 28 AQWRNPVMFIVWVGSLLTTCITIAPASFGMPGNNLALFNAIITGILFITVLFANFAEAVAEGRGKAQADSLKGTKKTTFA 107 (675)
T ss_pred HHhhChHHHHHHHHHHHHHHHHHhhhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCceE
Confidence 3678999999999999999987642 11 113588753 344445666677778888888889898876656568
Q ss_pred EEEE-CCeEEEEeccCCCCCcEEEecCCCcccccEEEEeecceEEecccccCCCCccccCCCCC--eEEeccEEeeceEE
Q 003189 241 QVAR-NGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNALNP--FLLSGTKVQNGSCK 317 (840)
Q Consensus 241 ~V~R-dG~~~~I~~~dLvvGDIV~l~~Gd~VPaDgvll~g~~l~VDES~LTGES~pv~k~~~~~--~l~sGt~v~~G~~~ 317 (840)
+|+| ||++++|++++|+|||+|.+++||+|||||++++|+ +.||||+|||||.||.|..++. .+|+||.|.+|+++
T Consensus 108 ~vlr~dg~~~~V~~~~L~~GDiV~V~~Gd~IPaDG~vieG~-~~VDESaLTGES~PV~K~~g~~~~~V~aGT~v~~G~~~ 186 (675)
T TIGR01497 108 KLLRDDGAIDKVPADQLKKGDIVLVEAGDVIPCDGEVIEGV-ASVDESAITGESAPVIKESGGDFASVTGGTRILSDWLV 186 (675)
T ss_pred EEEeeCCEEEEEEHHHCCCCCEEEECCCCEEeeeEEEEEcc-EEEEcccccCCCCceeecCCCCcceeecCcEEEeeEEE
Confidence 8886 899999999999999999999999999999999996 6999999999999999997764 49999999999999
Q ss_pred EEEEEEcccchHHHHHHhhcCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhcccCCCccccCCcChHHH
Q 003189 318 MLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEI 397 (840)
Q Consensus 318 ~~V~~vG~~T~~g~i~~~~~~~~~~~tplq~~l~~~a~~~~~~~l~~a~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (840)
++|+++|.+|++|+|.+++++++.++||+|..++.+..++..+.+++ ++.+|.... |.+.
T Consensus 187 i~Vt~~g~~S~lgri~~lve~a~~~ktplq~~l~~l~~~l~~v~li~---~~~~~~~~~------------~~~~----- 246 (675)
T TIGR01497 187 VECTANPGETFLDRMIALVEGAQRRKTPNEIALTILLIALTLVFLLV---TATLWPFAA------------YGGN----- 246 (675)
T ss_pred EEEEEecccCHHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHHHH---HHHHHHHHH------------hcCh-----
Confidence 99999999999999999999999989999988887765544332221 122221110 1110
Q ss_pred HHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHhccccccccchhhhccCCeeEEEecccCccccCceEEEEEEEcCee
Q 003189 398 LEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEI 477 (840)
Q Consensus 398 ~~~~~~ai~ilvva~P~~Lplav~l~l~~~~~~l~~~~ilvr~~~a~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~ 477 (840)
...+.++++++|++|||+|+...+.....++++|+++|+++|+++++|+||++|+||||||||||+|+|++++++..+..
T Consensus 247 ~~~~~~lvallV~aiP~aLg~l~~av~iag~~r~ar~gvLvK~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~~~~~ 326 (675)
T TIGR01497 247 AISVTVLVALLVCLIPTTIGGLLSAIGIAGMDRVLGFNVIATSGRAVEACGDVDTLLLDKTGTITLGNRLASEFIPAQGV 326 (675)
T ss_pred hHHHHHHHHHHHHhCchhhhhHHHHHHHHHHHHHHHCCeEeeCcHHHHHhhCCCEEEECCCCcccCCCeEEEEEEecCCC
Confidence 12466779999999999988888888788999999999999999999999999999999999999999999988753211
Q ss_pred eeecCCCCCCCCCCCCChhHHHHHHHHHHhcCCceEEecCCCceeEcCChhhHHHHHHHHHcCCChHHHhhccceEEEec
Q 003189 478 KEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEP 557 (840)
Q Consensus 478 ~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~g~p~e~All~~~~~~~~~~~~~~~~~~i~~~~p 557 (840)
+..+ +...++.++. .+.||+++|+++++.+.+.+... ..++..+..|
T Consensus 327 ------------------~~~~-ll~~aa~~~~------------~s~hP~a~Aiv~~a~~~~~~~~~--~~~~~~~~~p 373 (675)
T TIGR01497 327 ------------------DEKT-LADAAQLASL------------ADDTPEGKSIVILAKQLGIREDD--VQSLHATFVE 373 (675)
T ss_pred ------------------cHHH-HHHHHHHhcC------------CCCCcHHHHHHHHHHHcCCCccc--cccccceEEE
Confidence 1112 2233333321 14689999999999877654322 1234567899
Q ss_pred CCCCCceEEEEEEeCCCcEEEEEcCchHHHHHhcccccccCCceeeCCHHHHHHHHHHHHHHHHcccceeEEEEEEcCCC
Q 003189 558 FNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNE 637 (840)
Q Consensus 558 F~s~~k~~~vv~~~~~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~glr~l~~A~~~~~~~ 637 (840)
|++.++++++.+. ++ +.++||++|.+++.|+. +|...| ..+++.+++++++|+|++++|+
T Consensus 374 f~~~~~~sg~~~~--~g--~~~~kGa~e~i~~~~~~----~g~~~~------~~~~~~~~~~a~~G~r~l~va~------ 433 (675)
T TIGR01497 374 FTAQTRMSGINLD--NG--RMIRKGAVDAIKRHVEA----NGGHIP------TDLDQAVDQVARQGGTPLVVCE------ 433 (675)
T ss_pred EcCCCcEEEEEEe--CC--eEEEECCHHHHHHHHHh----cCCCCc------HHHHHHHHHHHhCCCeEEEEEE------
Confidence 9999888876543 22 56899999999998852 222222 3467778899999999999985
Q ss_pred CCCCCCCCCCceeeeeeecccCCCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCH
Q 003189 638 FSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSD 717 (840)
Q Consensus 638 ~~~~~~~~~~~~~~lg~~~~~D~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~ 717 (840)
+.+++|+++++||+||+++++|++|+++|++++|+|||+..+|.++|+++||..
T Consensus 434 ----------~~~~lG~i~l~D~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~lGI~~---------------- 487 (675)
T TIGR01497 434 ----------DNRIYGVIYLKDIVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAEAGVDD---------------- 487 (675)
T ss_pred ----------CCEEEEEEEecccchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCE----------------
Confidence 358999999999999999999999999999999999999999999999999964
Q ss_pred HHHhhhcCCceEEEecCcccHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEEecCCCcHHHHhhcCEEeccCCch
Q 003189 718 EELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFS 797 (840)
Q Consensus 718 ~~~~~~~~~~~v~ar~~P~~K~~~V~~l~~~~g~~v~~~GDG~ND~~al~~Advgiamg~~g~~~ak~~aDivlldd~f~ 797 (840)
++||++|+||..+|+.+|++ |+.|+|+|||+||+|||++|||||||| +|++++|++||++++||||+
T Consensus 488 -----------v~a~~~PedK~~~v~~lq~~-g~~VamvGDG~NDapAL~~AdvGiAm~-~gt~~akeaadivLldd~~s 554 (675)
T TIGR01497 488 -----------FIAEATPEDKIALIRQEQAE-GKLVAMTGDGTNDAPALAQADVGVAMN-SGTQAAKEAANMVDLDSDPT 554 (675)
T ss_pred -----------EEcCCCHHHHHHHHHHHHHc-CCeEEEECCCcchHHHHHhCCEeEEeC-CCCHHHHHhCCEEECCCCHH
Confidence 99999999999999999998 999999999999999999999999999 99999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003189 798 TIVTVAKWGRSVYINIQKFVQFQLTVNVV 826 (840)
Q Consensus 798 ~i~~~i~~gR~~~~~i~k~i~f~l~~N~~ 826 (840)
+|+++++|||+++-+......|++.-++.
T Consensus 555 ~Iv~av~~GR~~~~t~~~~~t~~~~~~~~ 583 (675)
T TIGR01497 555 KLIEVVHIGKQLLITRGALTTFSIANDVA 583 (675)
T ss_pred HHHHHHHHHHHHHHHHHHHheeeecccHH
Confidence 99999999999999999999999877654
No 20
>PLN03190 aminophospholipid translocase; Provisional
Probab=100.00 E-value=2.4e-86 Score=813.43 Aligned_cols=666 Identities=22% Similarity=0.301 Sum_probs=523.8
Q ss_pred hcCCCCCCCCCCccHH----HHHHHHHhhhHHHHHHHHHHHHHHhhhcccCCCCCcchhHHHHHHHHHHHHHHHHHHHHH
Q 003189 149 IYGINKFTESPARGFW----VYVWEALHDMTLMILAVCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQ 224 (840)
Q Consensus 149 ~~G~N~~~~~~~~~f~----~~~~~~l~~~~~~il~i~a~is~~~~~~~~~~~~~~~d~~~i~~~illv~~v~~~~~~~~ 224 (840)
.|..|.+...+. ++| +.+|+||+...++++++++++.++..+... ...+.++++++++++++++++.+
T Consensus 86 ~f~~N~i~TsKY-t~~tFlP~~L~eQF~r~aN~YFL~I~ilq~ip~~s~~-------~~~t~~~PL~~vl~v~~ike~~E 157 (1178)
T PLN03190 86 EFAGNSIRTAKY-SVFSFLPRNLFEQFHRVAYIYFLVIAVLNQLPQLAVF-------GRGASILPLAFVLLVTAVKDAYE 157 (1178)
T ss_pred cCCCCeeecccc-ccHHHHHHHHHHHHHhhhhHHHHHHHHHHhCCCcccC-------CcchHHHHHHHHHHHHHHHHHHH
Confidence 588999976553 333 678999999999999999999998876542 23456678999999999999999
Q ss_pred HHHHhHhHhhhcCceEEEEECCeEEEEeccCCCCCcEEEecCCCcccccEEEEeecc----eEEecccccCCCCccccCC
Q 003189 225 SLQFKDLDREKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFS----VLINESSLTGESEPVNVNA 300 (840)
Q Consensus 225 ~~~~~~l~~~~~~~~v~V~RdG~~~~I~~~dLvvGDIV~l~~Gd~VPaDgvll~g~~----l~VDES~LTGES~pv~k~~ 300 (840)
+.++++.++..++..++|+|+|.++++++.||+|||+|.|++||+|||||+++++++ +.||||+|||||.|+.|..
T Consensus 158 d~~r~k~d~~~N~~~~~v~~~~~~~~i~~~~i~vGDiv~v~~ge~iPaD~~ll~Ss~~~G~~~Vdts~LdGEt~~k~k~~ 237 (1178)
T PLN03190 158 DWRRHRSDRIENNRLAWVLVDDQFQEKKWKDIRVGEIIKIQANDTLPCDMVLLSTSDPTGVAYVQTINLDGESNLKTRYA 237 (1178)
T ss_pred HHHHHHhHHhhcCcEEEEEECCeEEEEeHHHCCCCCEEEECCCCEeeeeEEEEeccCCCceEEEEccccCCeeeeeEecc
Confidence 999999999989999999999999999999999999999999999999999998443 7999999999999998842
Q ss_pred C--------------------------------------------CCeEEeccEEeec-eEEEEEEEEcccchHHHHHHh
Q 003189 301 L--------------------------------------------NPFLLSGTKVQNG-SCKMLVTTVGMRTQWGKLMAT 335 (840)
Q Consensus 301 ~--------------------------------------------~~~l~sGt~v~~G-~~~~~V~~vG~~T~~g~i~~~ 335 (840)
. +++++.||.+.+. .+.++|++||.+| |++..
T Consensus 238 ~~~~~~~~~~~~~~~~~i~~e~Pn~~l~~F~G~i~~~~~~~~l~~~n~llRG~~LrnT~~i~GvVVYTG~dT---K~~~N 314 (1178)
T PLN03190 238 KQETLSKIPEKEKINGLIKCEKPNRNIYGFQANMEVDGKRLSLGPSNIILRGCELKNTAWAIGVAVYCGRET---KAMLN 314 (1178)
T ss_pred cchhhhcchhhhhceEEEEEeCCCccceeEEEEEEECCCcccCCccceeeccceecCCceEEEEEEEechhh---hHhhc
Confidence 1 2356667776653 6999999999999 56666
Q ss_pred hcCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhcccCCCccccCCc-----------Ch----HHHHHH
Q 003189 336 LSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGD-----------DA----LEILEF 400 (840)
Q Consensus 336 ~~~~~~~~tplq~~l~~~a~~~~~~~l~~a~~~~~v~~~~~~~~~~~~~~~~~~~~~-----------~~----~~~~~~ 400 (840)
-..+..+.+++++++|++..++..+.++++++++++... +.........+..|... .. ...+..
T Consensus 315 ~~~~~~K~S~le~~~N~~vi~l~~i~~~l~~i~~i~~~~-~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (1178)
T PLN03190 315 NSGAPSKRSRLETRMNLEIIILSLFLIALCTIVSVCAAV-WLRRHRDELDTIPFYRRKDFSEGGPKNYNYYGWGWEIFFT 393 (1178)
T ss_pred CCCCCCCccHHHHHHhHHHHHHHHHHHHHHHHHHHHHHh-hhccccccccccccccccccccccccccccchhhHHHHHH
Confidence 666667889999999999988877776666655543211 11100000000011100 00 011222
Q ss_pred HHHHHHHHHHhcCCchHHHHHHHHHHHHHHHhccc----------cccccchhhhccCCeeEEEecccCccccCceEEEE
Q 003189 401 FAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDK----------ALVRHLAACETMGSATSICSDKTGTLTTNHMTVLK 470 (840)
Q Consensus 401 ~~~ai~ilvva~P~~Lplav~l~l~~~~~~l~~~~----------ilvr~~~a~E~lg~v~~I~~DKTGTLT~n~m~v~~ 470 (840)
|...+.++-..+|.+|+..+.++....+..|.+|. +.+|+.+..|+||++++||+|||||||+|+|++.+
T Consensus 394 f~~~lil~~~~IPISL~Vtleivk~~qa~~I~~D~~m~~~~~~~~~~vr~snl~EeLGqV~yIfSDKTGTLT~N~M~fk~ 473 (1178)
T PLN03190 394 FLMSVIVFQIMIPISLYISMELVRVGQAYFMIRDDQMYDEASNSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFQC 473 (1178)
T ss_pred HHHHHHHHHhhcceeeeeeHHHHHHHHHHHHHhhhhcccccCCCcceeccCcchhhhccceEEEEcCCCccccceEEEEE
Confidence 33344555688999999999999977677777765 78999999999999999999999999999999999
Q ss_pred EEEcCeeeeecCCC-------------C---CCCCC------------CCCC-h--hHHHHHHHHHHhcCCceEEecCC-
Q 003189 471 ACICEEIKEVDNSK-------------G---TPAFG------------SSIP-A--SASKLLLQSIFNNTGGEVVIGEG- 518 (840)
Q Consensus 471 ~~~~~~~~~~~~~~-------------~---~~~~~------------~~~~-~--~~~~~l~~~i~~~~~~~~~~~~~- 518 (840)
+++++..|...... + .+... .... + .....+..+++.||+......++
T Consensus 474 ~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~lalChtv~~~~~~~~ 553 (1178)
T PLN03190 474 ASIWGVDYSDGRTPTQNDHAGYSVEVDGKILRPKMKVKVDPQLLELSKSGKDTEEAKHVHDFFLALAACNTIVPIVVDDT 553 (1178)
T ss_pred EEECCEEcccccccchhhhhccccccccccccccccccCCHHHHhhhhccccchhhHHHHHHHHHHHhcCCceeeccCCC
Confidence 99987665321100 0 00000 0000 0 11233456777788776542111
Q ss_pred -C----ce-eEcCChhhHHHHHHHHHcCC------------ChHHHhhccceEEEecCCCCCceEEEEEEeCCCcEEEEE
Q 003189 519 -N----KT-EILGTPTETAILEFGLLLGG------------DFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHC 580 (840)
Q Consensus 519 -~----~~-~~~g~p~e~All~~~~~~~~------------~~~~~~~~~~i~~~~pF~s~~k~~~vv~~~~~~~~~~~~ 580 (840)
+ .. ...++|+|.||+++|...|+ +....+..+++++++||+|+||||+|+++.+++.+.+++
T Consensus 554 ~~~~~~~~~Y~a~SPdE~ALv~~a~~~G~~l~~r~~~~i~i~~~~~~~~~~il~~~pF~S~rKrMSvIv~~~~~~~~l~~ 633 (1178)
T PLN03190 554 SDPTVKLMDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIHGERQRFNVLGLHEFDSDRKRMSVILGCPDKTVKVFV 633 (1178)
T ss_pred CCccccceEEecCCCcHHHHHHHHHHCCCeEecccCCeEEEeeccceecceeEEEecccccccEEEEEEEcCCCcEEEEE
Confidence 1 12 34559999999999999987 444566789999999999999999999998888899999
Q ss_pred cCchHHHHHhcccccccCCceeeCCHHHHHHHHHHHHHHHHcccceeEEEEEEcCCCCCCC-------------------
Q 003189 581 KGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSAD------------------- 641 (840)
Q Consensus 581 KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~glr~l~~A~~~~~~~~~~~------------------- 641 (840)
|||||.|++.|++.. +++.++.+.+.+++|+++|+|||++|||+++++...+
T Consensus 634 KGA~e~il~~~~~~~---------~~~~~~~~~~~l~~~a~~GlRtL~lA~k~l~~~e~~~~~~~~~~a~~~~~~r~~~l 704 (1178)
T PLN03190 634 KGADTSMFSVIDRSL---------NMNVIRATEAHLHTYSSLGLRTLVVGMRELNDSEFEQWHFSFEAASTALIGRAALL 704 (1178)
T ss_pred ecCcHHHHHhhcccc---------cchhHHHHHHHHHHHHhcCCceEEEEEEeCCHHHHhhHHHHHHHhhhhhhhhHHHH
Confidence 999999999997542 2345667889999999999999999999996531110
Q ss_pred ---CCCCCCceeeeeeecccCCCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCC--------------
Q 003189 642 ---APIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNG-------------- 704 (840)
Q Consensus 642 ---~~~~~~~~~~lg~~~~~D~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~-------------- 704 (840)
.+..|+|++++|+++++||+|++++++|+.|+++||+++|+|||+..||.+||+.|||.+++.
T Consensus 705 ~~~~~~iE~dL~~lG~~~~~D~lr~~v~~~I~~l~~agi~v~mlTGD~~~tAi~IA~s~~Ll~~~~~~i~i~~~~~~~~~ 784 (1178)
T PLN03190 705 RKVASNVENNLTILGASAIEDKLQQGVPEAIESLRTAGIKVWVLTGDKQETAISIGYSSKLLTNKMTQIIINSNSKESCR 784 (1178)
T ss_pred HhhHHhhhcCcEEEEEEEEecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhCCCCCCCeeEEecCCchhhHH
Confidence 124589999999999999999999999999999999999999999999999999999975431
Q ss_pred -----------------------------------ccccChhhhcCCH----HHHhhhcCCce--EEEecCcccHHHHHH
Q 003189 705 -----------------------------------IAIEGPEFREKSD----EELSKLIPKIQ--VMARSSPMDKHTLVK 743 (840)
Q Consensus 705 -----------------------------------~~~~g~~~~~~~~----~~~~~~~~~~~--v~ar~~P~~K~~~V~ 743 (840)
++++|.++..+.+ +++.+++.++. |+||++|.||+++|+
T Consensus 785 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lVIdG~~L~~~l~~~~~~~f~~l~~~~~~VI~cR~sP~QKa~IV~ 864 (1178)
T PLN03190 785 KSLEDALVMSKKLTTVSGISQNTGGSSAAASDPVALIIDGTSLVYVLDSELEEQLFQLASKCSVVLCCRVAPLQKAGIVA 864 (1178)
T ss_pred HHHHHHhhhhhhccccccccccccccccccCCceEEEEEcHHHHHHhhhHHHHHHHHHHHhCCEEEEecCCHHHHHHHHH
Confidence 4566666665543 34555555444 799999999999999
Q ss_pred HHHHhCCCEEEEEcCCccCHHHhhhCCccEEecCCCcH--HHHhhcCEEeccCCchHHHHH-HHHHHHHHHHHHHHHHHH
Q 003189 744 HLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTE--VAKESADVIILDDNFSTIVTV-AKWGRSVYINIQKFVQFQ 820 (840)
Q Consensus 744 ~l~~~~g~~v~~~GDG~ND~~al~~Advgiamg~~g~~--~ak~~aDivlldd~f~~i~~~-i~~gR~~~~~i~k~i~f~ 820 (840)
.+|+..+++|+|+|||.||+|||++||||| |++|+| .|+.+||+.+.. |..+.++ +.+||+.|.++.+.+.|.
T Consensus 865 ~vk~~~~~vtlaIGDGaNDv~mIq~AdVGI--GIsG~EG~qA~~aSDfaI~~--Fr~L~rLLlvHGr~~y~R~s~~i~y~ 940 (1178)
T PLN03190 865 LVKNRTSDMTLAIGDGANDVSMIQMADVGV--GISGQEGRQAVMASDFAMGQ--FRFLVPLLLVHGHWNYQRMGYMILYN 940 (1178)
T ss_pred HHHhcCCcEEEEECCCcchHHHHHhcCeee--eecCchhHHHHHhhccchhh--hHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence 999874589999999999999999999999 778998 789999999976 9999999 558999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhcC
Q 003189 821 LTVNVVALIVNFSSACLTG 839 (840)
Q Consensus 821 l~~N~~~l~~~~~~~~~~g 839 (840)
++.|++..++.|++++++|
T Consensus 941 fYKN~~~~~~qf~f~~~~~ 959 (1178)
T PLN03190 941 FYRNAVFVLVLFWYVLFTC 959 (1178)
T ss_pred HHHHHHHHHHHHHHHHHHc
Confidence 9999999999999999876
No 21
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=100.00 E-value=2.2e-84 Score=774.16 Aligned_cols=640 Identities=20% Similarity=0.282 Sum_probs=485.6
Q ss_pred hccchhhhHHHHHhhhhhhhhHhHhhhhhhhhhhcccCCCCccccccccccCCcccChhhhhhhhccCChhHHHHhcCHH
Q 003189 43 ANLSKRFEAEAIRRSNQEKFRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQICPDELGSIVEGHDIKKLKVHGGVE 122 (840)
Q Consensus 43 ~~~~~~~e~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~gv~ 122 (840)
..|....|+.....+++..+++++.+.+..+.|+.. . . ..+...++..||.+.+.+-....+.++......+.-.-
T Consensus 65 ~sCa~~Ie~aL~~~~GV~~v~Vn~at~k~~V~~d~~--~-~-~~I~~aI~~~Gy~a~~~~~~~~~~~~~~~~~~~~~~~~ 140 (741)
T PRK11033 65 PSCARKVENAVRQLAGVNQVQVLFATEKLVVDADND--I-R-AQVESAVQKAGFSLRDEQAAAAAPESRLKSENLPLITL 140 (741)
T ss_pred HHHHHHHHHHHhcCCCeeeEEEEcCCCeEEEEeccc--c-h-HHHHHHHHhcccccccccchhhhHHHHHHHHHHHHHHH
Confidence 467777788888888888899998888877776433 1 1 34445567789987654311100010110011111001
Q ss_pred HHHHHhCCCcCCCCCccHHHHHHHHHhcCCCCCCCCCCccHHHHHHHHHhhhH---HHHHH-HHHHHHHHhhhcccCCCC
Q 003189 123 GIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMT---LMILA-VCALVSLVVGIATEGWPK 198 (840)
Q Consensus 123 ~l~~~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~~f~~~~~~~l~~~~---~~il~-i~a~is~~~~~~~~~~~~ 198 (840)
....++..-+ .++... . .+...... . ...+.||++.+|+.++... +-.|+ ++++.+++++
T Consensus 141 ~~~~~~~~~~-~~~~~~---~-~~~~~~~~-~--~~~~~~~~~~a~~~l~~~~~~~~~~L~~~a~~~a~~~~-------- 204 (741)
T PRK11033 141 AVMMAISWGL-EQFNHP---F-GQLAFIAT-T--LVGLYPIARKALRLIRSGSPFAIETLMSVAAIGALFIG-------- 204 (741)
T ss_pred HHHHHHHHHH-hhhhhH---H-HHHHHHHH-H--HHHHHHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHHc--------
Confidence 1112221100 011110 1 11111010 0 1245689999999997643 22333 3333444433
Q ss_pred CcchhHHHHHHHHHHHHHHHHHHHHHHHHHhHhHhhhcCceEEEEECCeEEEEeccCCCCCcEEEecCCCcccccEEEEe
Q 003189 199 GAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVS 278 (840)
Q Consensus 199 ~~~d~~~i~~~illv~~v~~~~~~~~~~~~~~l~~~~~~~~v~V~RdG~~~~I~~~dLvvGDIV~l~~Gd~VPaDgvll~ 278 (840)
.|+++..+++.+++.-.+....+++.++..++|.+ +.+..++|+|||++++|++++|+|||+|.|++||+|||||+|++
T Consensus 205 ~~~~a~~i~~l~~~g~~le~~~~~ra~~~~~~L~~-l~p~~a~vir~g~~~~v~~~~l~~GDiv~v~~G~~IP~Dg~vi~ 283 (741)
T PRK11033 205 ATAEAAMVLLLFLIGERLEGYAASRARRGVSALMA-LVPETATRLRDGEREEVAIADLRPGDVIEVAAGGRLPADGKLLS 283 (741)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEecceEEEE
Confidence 25666555444444444444444444444445554 45668999999999999999999999999999999999999999
Q ss_pred ecceEEecccccCCCCccccCCCCCeEEeccEEeeceEEEEEEEEcccchHHHHHHhhcCCCCCCChHHHHHHHHHHHHH
Q 003189 279 GFSVLINESSLTGESEPVNVNALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIG 358 (840)
Q Consensus 279 g~~l~VDES~LTGES~pv~k~~~~~~l~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~~~tplq~~l~~~a~~~~ 358 (840)
|+ ..||||+|||||.|+.|..++. ||+||.+.+|.++++|+++|.+|.+|+|.+++++++.+++|+|+.+|+++.+++
T Consensus 284 g~-~~vdes~lTGEs~Pv~k~~Gd~-V~aGt~~~~G~~~i~V~~~g~~s~l~~I~~lv~~a~~~k~~~q~~~d~~a~~~~ 361 (741)
T PRK11033 284 PF-ASFDESALTGESIPVERATGEK-VPAGATSVDRLVTLEVLSEPGASAIDRILHLIEEAEERRAPIERFIDRFSRIYT 361 (741)
T ss_pred Cc-EEeecccccCCCCCEecCCCCe-eccCCEEcCceEEEEEEeccccCHHHHHHHHHHHhhccCChHHHHHHHHHHHHH
Confidence 97 5999999999999999998875 999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhHhhhcccCCCccccCCcChHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHhcccccc
Q 003189 359 KIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALV 438 (840)
Q Consensus 359 ~~~l~~a~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ai~ilvva~P~~Lplav~l~l~~~~~~l~~~~ilv 438 (840)
++++++++++|++|...+ +. .+...+..++++++++|||+|.+++|+++..++.+++|+|+++
T Consensus 362 ~~v~~~a~~~~~~~~~~~-------~~----------~~~~~i~~a~svlviacPcaL~latP~a~~~~l~~aar~gili 424 (741)
T PRK11033 362 PAIMLVALLVILVPPLLF-------AA----------PWQEWIYRGLTLLLIGCPCALVISTPAAITSGLAAAARRGALI 424 (741)
T ss_pred HHHHHHHHHHHHHHHHHc-------cC----------CHHHHHHHHHHHHHHhchhhhhhhhHHHHHHHHHHHHHCCeEE
Confidence 999999999998863211 00 2345678899999999999999999999999999999999999
Q ss_pred ccchhhhccCCeeEEEecccCccccCceEEEEEEEcCeeeeecCCCCCCCCCCCCChhHHHHHHHHHHhcCCceEEecCC
Q 003189 439 RHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEG 518 (840)
Q Consensus 439 r~~~a~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~ 518 (840)
|+++++|+|+++|+||||||||||+|+|+|++++..+... .++.+.+. .. ++
T Consensus 425 k~~~alE~l~~v~~v~fDKTGTLT~g~~~v~~~~~~~~~~---------------~~~~l~~a---a~------~e---- 476 (741)
T PRK11033 425 KGGAALEQLGRVTTVAFDKTGTLTEGKPQVTDIHPATGIS---------------ESELLALA---AA------VE---- 476 (741)
T ss_pred cCcHHHHHhhCCCEEEEeCCCCCcCCceEEEEEEecCCCC---------------HHHHHHHH---HH------Hh----
Confidence 9999999999999999999999999999999986533210 01222221 11 11
Q ss_pred CceeEcCChhhHHHHHHHHHcCCChHHHhhccceEEEecCCCCCceE---EEEEEeCCCcEEEEEcCchHHHHHhccccc
Q 003189 519 NKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQM---GVVIELPEGGFRVHCKGASEIILAACDKFL 595 (840)
Q Consensus 519 ~~~~~~g~p~e~All~~~~~~~~~~~~~~~~~~i~~~~pF~s~~k~~---~vv~~~~~~~~~~~~KGa~e~il~~c~~~~ 595 (840)
..+.||+++|+++++...+.+ .||.++++.+ ++....++..+ .-|+++.+.+
T Consensus 477 ---~~s~hPia~Ai~~~a~~~~~~-------------~~~~~~~~~~~g~Gv~~~~~g~~~---~ig~~~~~~~------ 531 (741)
T PRK11033 477 ---QGSTHPLAQAIVREAQVRGLA-------------IPEAESQRALAGSGIEGQVNGERV---LICAPGKLPP------ 531 (741)
T ss_pred ---cCCCCHHHHHHHHHHHhcCCC-------------CCCCcceEEEeeEEEEEEECCEEE---EEecchhhhh------
Confidence 126799999999998766543 4666666664 22222333322 2377766532
Q ss_pred ccCCceeeCCHHHHHHHHHHHHHHHHcccceeEEEEEEcCCCCCCCCCCCCCceeeeeeecccCCCCcchHHHHHHHHhC
Q 003189 596 NSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSA 675 (840)
Q Consensus 596 ~~~g~~~~l~~~~~~~~~~~~~~~~~~glr~l~~A~~~~~~~~~~~~~~~~~~~~~lg~~~~~D~lR~~~~~aI~~l~~a 675 (840)
++ ..+.+.++.+..+|++++++|+ +.+++|+++|+|++|||++++|++|+++
T Consensus 532 --------~~----~~~~~~~~~~~~~g~~~v~va~----------------~~~~~g~i~l~d~~r~~a~~~i~~L~~~ 583 (741)
T PRK11033 532 --------LA----DAFAGQINELESAGKTVVLVLR----------------NDDVLGLIALQDTLRADARQAISELKAL 583 (741)
T ss_pred --------cc----HHHHHHHHHHHhCCCEEEEEEE----------------CCEEEEEEEEecCCchhHHHHHHHHHHC
Confidence 12 2244556788999999999984 4689999999999999999999999999
Q ss_pred CCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCcccHHHHHHHHHHhCCCEEEE
Q 003189 676 GITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAV 755 (840)
Q Consensus 676 Gi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~~V~~l~~~~g~~v~~ 755 (840)
|++++|+|||+..+|.++|+++||. ++++.+|+||..+|+.||+. +.|+|
T Consensus 584 gi~~~llTGd~~~~a~~ia~~lgi~----------------------------~~~~~~p~~K~~~v~~l~~~--~~v~m 633 (741)
T PRK11033 584 GIKGVMLTGDNPRAAAAIAGELGID----------------------------FRAGLLPEDKVKAVTELNQH--APLAM 633 (741)
T ss_pred CCEEEEEcCCCHHHHHHHHHHcCCC----------------------------eecCCCHHHHHHHHHHHhcC--CCEEE
Confidence 9999999999999999999999995 67889999999999999954 68999
Q ss_pred EcCCccCHHHhhhCCccEEecCCCcHHHHhhcCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003189 756 TGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSS 834 (840)
Q Consensus 756 ~GDG~ND~~al~~Advgiamg~~g~~~ak~~aDivlldd~f~~i~~~i~~gR~~~~~i~k~i~f~l~~N~~~l~~~~~~ 834 (840)
+|||.||+|||++|||||||| +|+++++++||+++++|++..|++++++||+++.||+||+.|++.||++++++++++
T Consensus 634 vGDgiNDapAl~~A~vgia~g-~~~~~a~~~adivl~~~~l~~l~~~i~~sr~~~~~I~~nl~~a~~~n~~~i~~a~~g 711 (741)
T PRK11033 634 VGDGINDAPAMKAASIGIAMG-SGTDVALETADAALTHNRLRGLAQMIELSRATHANIRQNITIALGLKAIFLVTTLLG 711 (741)
T ss_pred EECCHHhHHHHHhCCeeEEec-CCCHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999 899999999999999999999999999999999999999999999999999998765
No 22
>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.3e-86 Score=744.88 Aligned_cols=663 Identities=22% Similarity=0.296 Sum_probs=510.3
Q ss_pred ccchhhhHHHHHhhhhhhhhHhHhhhhhhhhhhcccCCCCccccccccccCCcccChhhh-hhhhc-----cCC-----h
Q 003189 44 NLSKRFEAEAIRRSNQEKFRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQICPDEL-GSIVE-----GHD-----I 112 (840)
Q Consensus 44 ~~~~~~e~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~-----~~~-----~ 112 (840)
.+....|+...+.+++..+++...+.++.+.|++. ...+.++.+.+.+.||...-... ....+ ..+ .
T Consensus 159 s~~~~ie~~l~~l~gV~~~sv~~~t~~~~V~~~~~--~~~pr~i~k~ie~~~~~~~~~~~~~~~~~~~l~~~~ei~~w~~ 236 (951)
T KOG0207|consen 159 SCVSKIESILERLRGVKSFSVSLATDTAIVVYDPE--ITGPRDIIKAIEETGFEASVRPYGDTTFKNSLKHKEEIRKWKR 236 (951)
T ss_pred chhhhhHHHHhhccCeeEEEEeccCCceEEEeccc--ccChHHHHHHHHhhcccceeeeccccchhhhhhhhhHHHhcch
Confidence 44556678889999999999999999999888776 67778888888888886543321 11111 111 1
Q ss_pred hHHHHhcCHHHHHH--HhCC-----------CcCCCCCccHHHHHHHHHhcCCCCCCC----CCCccHHHHHHHHHhhhH
Q 003189 113 KKLKVHGGVEGIAE--KLST-----------SITDGISTSEHLLNRRKEIYGINKFTE----SPARGFWVYVWEALHDMT 175 (840)
Q Consensus 113 ~~l~~~~gv~~l~~--~l~~-----------~~~~Gl~~~~~~~~~r~~~~G~N~~~~----~~~~~f~~~~~~~l~~~~ 175 (840)
..+... +...... +.-. .+..|+.-.. +-.+.+.. .-+++||.-+|+++++..
T Consensus 237 ~fl~s~-~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~l~~~L~~~vqf~~G~~fy~~A~ksL~~g~ 306 (951)
T KOG0207|consen 237 PFLISL-GFSLPVSFAMIICPPLAWILALLVPFLPGLSYGN---------SLSFVLATPVQFVGGRPFYLAAYKSLKRGS 306 (951)
T ss_pred HHHHHH-HHHHHHHHHHHHhccchhhhhhhccccccchhhh---------HHHhhhheeeEEecceeeHHHHHHHHhcCC
Confidence 111111 1111111 1111 2223333221 11122222 268999999999999887
Q ss_pred HHH--HH-HHHHHHHHhhhcc------cCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHhHhHh------hhcCceE
Q 003189 176 LMI--LA-VCALVSLVVGIAT------EGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDR------EKKKITV 240 (840)
Q Consensus 176 ~~i--l~-i~a~is~~~~~~~------~~~~~~~~d~~~i~~~illv~~v~~~~~~~~~~~~~~l~~------~~~~~~v 240 (840)
..| |+ +.+..++++.+.. ...+..+||...|++.++.+ ++|.++++..+..+ .+.+..+
T Consensus 307 ~nMdvLv~L~t~aay~~S~~~~~~~~~~~~~~tfFdt~~MLi~fi~l------gr~LE~~Ak~kts~alskLmsl~p~~a 380 (951)
T KOG0207|consen 307 ANMDVLVVLGTTAAYFYSIFSLLAAVVFDSPPTFFDTSPMLITFITL------GRWLESLAKGKTSEALSKLMSLAPSKA 380 (951)
T ss_pred CCceeehhhHHHHHHHHHHHHHHHHHHccCcchhccccHHHHHHHHH------HHHHHHHhhccchHHHHHHhhcCcccc
Confidence 654 22 1122222222211 12256788988887766665 89999988776443 2456788
Q ss_pred EEEECCe-EEEEeccCCCCCcEEEecCCCcccccEEEEeecceEEecccccCCCCccccCCCCCeEEeccEEeeceEEEE
Q 003189 241 QVARNGF-RRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNALNPFLLSGTKVQNGSCKML 319 (840)
Q Consensus 241 ~V~RdG~-~~~I~~~dLvvGDIV~l~~Gd~VPaDgvll~g~~l~VDES~LTGES~pv~k~~~~~~l~sGt~v~~G~~~~~ 319 (840)
.++.+|+ .++|+++.|.+||+|.+.||++||+||++++|++ .||||++|||+.||.|..+++ |.+||.+.+|...+.
T Consensus 381 ~ii~~g~~e~eI~v~lvq~gdivkV~pG~kiPvDG~Vv~Gss-~VDEs~iTGEs~PV~Kk~gs~-ViaGsiN~nG~l~Vk 458 (951)
T KOG0207|consen 381 TIIEDGSEEKEIPVDLVQVGDIVKVKPGEKIPVDGVVVDGSS-EVDESLITGESMPVPKKKGST-VIAGSINLNGTLLVK 458 (951)
T ss_pred eEeecCCcceEeeeeeeccCCEEEECCCCccccccEEEeCce-eechhhccCCceecccCCCCe-eeeeeecCCceEEEE
Confidence 8998886 8999999999999999999999999999999986 999999999999999999886 999999999999999
Q ss_pred EEEEcccchHHHHHHhhcCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhcccCCCccccCCcChHHHHH
Q 003189 320 VTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILE 399 (840)
Q Consensus 320 V~~vG~~T~~g~i~~~~~~~~~~~tplq~~l~~~a~~~~~~~l~~a~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (840)
+|++|.+|.+++|.+++++++..++|+|+.+|+++.+|+++++++++.+|++|++...+...+. ..| ...+..
T Consensus 459 aT~~g~dttla~IvkLVEEAQ~sKapiQq~aDkia~yFvP~Vi~lS~~t~~~w~~~g~~~~~~~---~~~----~~~~~~ 531 (951)
T KOG0207|consen 459 ATKVGGDTTLAQIVKLVEEAQLSKAPIQQLADKIAGYFVPVVIVLSLATFVVWILIGKIVFKYP---RSF----FDAFSH 531 (951)
T ss_pred EEeccccchHHHHHHHHHHHHcccchHHHHHHHhhhcCCchhhHHHHHHHHHHHHHccccccCc---chh----hHHHHH
Confidence 9999999999999999999999999999999999999999999999999999986543221111 111 135777
Q ss_pred HHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHhccccccccchhhhccCCeeEEEecccCccccCceEEEEEEEcCeeee
Q 003189 400 FFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKE 479 (840)
Q Consensus 400 ~~~~ai~ilvva~P~~Lplav~l~l~~~~~~l~~~~ilvr~~~a~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~ 479 (840)
+|..++++++++|||+|.||+|++...+....+++|+|+|..+++|++.++++|+||||||||+|+++|+++....+..
T Consensus 532 a~~~aisVlviACPCaLgLATPtAvmvatgvgA~nGvLIKGge~LE~~hkv~tVvFDKTGTLT~G~~~V~~~~~~~~~~- 610 (951)
T KOG0207|consen 532 AFQLAISVLVIACPCALGLATPTAVMVATGVGATNGVLIKGGEALEKAHKVKTVVFDKTGTLTEGKPTVVDFKSLSNPI- 610 (951)
T ss_pred HHHhhheEEEEECchhhhcCCceEEEEEechhhhcceEEcCcHHHHHHhcCCEEEEcCCCceecceEEEEEEEecCCcc-
Confidence 8899999999999999999999999999999999999999999999999999999999999999999999987654421
Q ss_pred ecCCCCCCCCCCCCCh-hHHHHHHHHHHhcCCceEEecCCCceeEcCChhhHHHHHHHHHcCCChHHHhhccceEEEecC
Q 003189 480 VDNSKGTPAFGSSIPA-SASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPF 558 (840)
Q Consensus 480 ~~~~~~~~~~~~~~~~-~~~~~l~~~i~~~~~~~~~~~~~~~~~~~g~p~e~All~~~~~~~~~~~~~~~~~~i~~~~pF 558 (840)
+. +.+.+. +..+ ..+.||..+|+.+|++...-. .....+.....|
T Consensus 611 --------------~~~e~l~~v---------~a~E-------s~SeHPig~AIv~yak~~~~~----~~~~~~~~~~~~ 656 (951)
T KOG0207|consen 611 --------------SLKEALALV---------AAME-------SGSEHPIGKAIVDYAKEKLVE----PNPEGVLSFEYF 656 (951)
T ss_pred --------------cHHHHHHHH---------HHHh-------cCCcCchHHHHHHHHHhcccc----cCccccceeecc
Confidence 11 122221 1111 127799999999999876511 011112222223
Q ss_pred CCCCceEEEEEEeCCCcEEEEEcCchHHHHHhcccccccCCceeeCCHHHHHHHHHHHHHHHHcccceeEEEEEEcCCCC
Q 003189 559 NSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEF 638 (840)
Q Consensus 559 ~s~~k~~~vv~~~~~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~glr~l~~A~~~~~~~~ 638 (840)
..+-+. +-+...+.. .+-|.-+.+. .+|...+ +.+++..++....|..+.+++
T Consensus 657 pg~g~~--~~~~~~~~~---i~iGN~~~~~--------r~~~~~~------~~i~~~~~~~e~~g~tvv~v~-------- 709 (951)
T KOG0207|consen 657 PGEGIY--VTVTVDGNE---VLIGNKEWMS--------RNGCSIP------DDILDALTESERKGQTVVYVA-------- 709 (951)
T ss_pred cCCCcc--cceEEeeeE---EeechHHHHH--------hcCCCCc------hhHHHhhhhHhhcCceEEEEE--------
Confidence 222222 112222222 2336655543 2333222 236667777778898888887
Q ss_pred CCCCCCCCCceeeeeeecccCCCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHH
Q 003189 639 SADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDE 718 (840)
Q Consensus 639 ~~~~~~~~~~~~~lg~~~~~D~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~ 718 (840)
-|.+++|++.++|++|||+..+|+.||+.|++++|+||||..+|+++|+++||..
T Consensus 710 --------vn~~l~gv~~l~D~vr~~a~~av~~Lk~~Gi~v~mLTGDn~~aA~svA~~VGi~~----------------- 764 (951)
T KOG0207|consen 710 --------VNGQLVGVFALEDQVRPDAALAVAELKSMGIKVVMLTGDNDAAARSVAQQVGIDN----------------- 764 (951)
T ss_pred --------ECCEEEEEEEeccccchhHHHHHHHHHhcCceEEEEcCCCHHHHHHHHHhhCcce-----------------
Confidence 4678999999999999999999999999999999999999999999999999765
Q ss_pred HHhhhcCCceEEEecCcccHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEEecCCCcHHHHhhcCEEeccCCchH
Q 003189 719 ELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFST 798 (840)
Q Consensus 719 ~~~~~~~~~~v~ar~~P~~K~~~V~~l~~~~g~~v~~~GDG~ND~~al~~Advgiamg~~g~~~ak~~aDivlldd~f~~ 798 (840)
|+|...|+||.+.|+.+|++ |+.|+|+|||+||+|||.+|||||+|| .|+++|.|+|||||+.+|+..
T Consensus 765 ----------V~aev~P~~K~~~Ik~lq~~-~~~VaMVGDGINDaPALA~AdVGIaig-~gs~vAieaADIVLmrn~L~~ 832 (951)
T KOG0207|consen 765 ----------VYAEVLPEQKAEKIKEIQKN-GGPVAMVGDGINDAPALAQADVGIAIG-AGSDVAIEAADIVLMRNDLRD 832 (951)
T ss_pred ----------EEeccCchhhHHHHHHHHhc-CCcEEEEeCCCCccHHHHhhccceeec-cccHHHHhhCCEEEEccchhh
Confidence 99999999999999999999 999999999999999999999999999 889999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003189 799 IVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNF 832 (840)
Q Consensus 799 i~~~i~~gR~~~~~i~k~i~f~l~~N~~~l~~~~ 832 (840)
++.+++.+|++..+||.|+.|+++||+++++++.
T Consensus 833 v~~ai~LSrkt~~rIk~N~~~A~~yn~~~IpIAa 866 (951)
T KOG0207|consen 833 VPFAIDLSRKTVKRIKLNFVWALIYNLVGIPIAA 866 (951)
T ss_pred hHHHHHHHHHHHhhHHHHHHHHHHHHHhhhhhhe
Confidence 9999999999999999999999999999999875
No 23
>KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.1e-83 Score=720.52 Aligned_cols=645 Identities=23% Similarity=0.325 Sum_probs=492.0
Q ss_pred cCCCCCccHHHHHHHHHhcCCCCCCCCCCccHHHHHHHHHhhhHHHHHHHHHHHHHHhhhcccCCCCCcchhHHHHHHHH
Q 003189 132 ITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCALVSLVVGIATEGWPKGAHDGLGIVMSIL 211 (840)
Q Consensus 132 ~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~~f~~~~~~~l~~~~~~il~i~a~is~~~~~~~~~~~~~~~d~~~i~~~il 211 (840)
...||...+ +..|+..||.|.+.. +-+|.+.++.+..-+|+..+..++.+ ++... +.||-+.+|++.-+
T Consensus 157 ~~~gL~~~~--~~~r~~iyG~N~i~l-~ik~i~~iLv~EvL~PfYlFQ~fSv~----lW~~d----~Y~~YA~cI~iisv 225 (1140)
T KOG0208|consen 157 VSNGLERQE--IIDRRIIYGRNVISL-PIKSISQILVKEVLNPFYLFQAFSVA----LWLAD----SYYYYAFCIVIISV 225 (1140)
T ss_pred ccCCccHHH--HHhHHhhcCCceeee-ecccHHHHHHHhccchHHHHHhHHhh----hhhcc----cchhhhhHHHHHHH
Confidence 357888766 889999999999964 56789999999988888766554444 33322 13344555544333
Q ss_pred HHHHHHHHHHHHHHHHHhHhHhhh-cCceEEEEECCeEEEEeccCCCCCcEEEecC-CCcccccEEEEeecceEEecccc
Q 003189 212 LVVFVTATSDYKQSLQFKDLDREK-KKITVQVARNGFRRKISIYDLLPGDIVHLCM-GDQVPADGLFVSGFSVLINESSL 289 (840)
Q Consensus 212 lv~~v~~~~~~~~~~~~~~l~~~~-~~~~v~V~RdG~~~~I~~~dLvvGDIV~l~~-Gd~VPaDgvll~g~~l~VDES~L 289 (840)
.-++++. |...++-.++.+.. ....|+|+|||.+++|.++|||||||+.+.+ |-..|||+++++|+ |.||||+|
T Consensus 226 ~Si~~sv---~e~r~qs~rlr~mv~~~~~V~V~R~g~~~ti~S~eLVPGDil~i~~~~~~~PcDa~Li~g~-civNEsmL 301 (1140)
T KOG0208|consen 226 YSIVLSV---YETRKQSIRLRSMVKFTCPVTVIRDGFWETVDSSELVPGDILYIPPPGKIMPCDALLISGD-CIVNESML 301 (1140)
T ss_pred HHHHHHH---HHHHHHHHHHHHHhcCCceEEEEECCEEEEEeccccccccEEEECCCCeEeecceEEEeCc-EEeecccc
Confidence 3333333 33344444444432 2358999999999999999999999999998 99999999999995 89999999
Q ss_pred cCCCCccccCC------------------CCCeEEeccEEee------ceEEEEEEEEcccchHHHHHHhhcCCCCCCCh
Q 003189 290 TGESEPVNVNA------------------LNPFLLSGTKVQN------GSCKMLVTTVGMRTQWGKLMATLSEGGDDETP 345 (840)
Q Consensus 290 TGES~pv~k~~------------------~~~~l~sGt~v~~------G~~~~~V~~vG~~T~~g~i~~~~~~~~~~~tp 345 (840)
||||.|+.|.+ ..+++|.||++.+ +.+.+.|++||.+|..|++.+++..+....
T Consensus 302 TGESVPv~K~~l~~~~~~~~~~~~~~~~~~rh~lfcGT~vlq~r~~~g~~v~a~V~RTGF~T~KGqLVRsilyPkP~~-- 379 (1140)
T KOG0208|consen 302 TGESVPVTKTPLPMGTDSLDSITISMSTNSRHTLFCGTKVLQARAYLGGPVLAMVLRTGFSTTKGQLVRSILYPKPVN-- 379 (1140)
T ss_pred cCCcccccccCCccccccCcCeeechhhcCcceeeccceEEEeecCCCCceEEEEEeccccccccHHHHhhcCCCCcc--
Confidence 99999999952 2357999999974 779999999999999999999999875433
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhcccCCCccccCCcChHHHHHHHHHHHHHHHHhcCCchHHHHHHHHH
Q 003189 346 LQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLA 425 (840)
Q Consensus 346 lq~~l~~~a~~~~~~~l~~a~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ai~ilvva~P~~Lplav~l~l~ 425 (840)
.++-+-+..|.....++|++.|+...+.+.... . ++-..++.++.++.+.+|+|||.++++...
T Consensus 380 --fkfyrds~~fi~~l~~ia~~gfiy~~i~l~~~g-----------~---~~~~iiirsLDliTi~VPPALPAaltvG~~ 443 (1140)
T KOG0208|consen 380 --FKFYRDSFKFILFLVIIALIGFIYTAIVLNLLG-----------V---PLKTIIIRSLDLITIVVPPALPAALTVGII 443 (1140)
T ss_pred --cHHHHHHHHHHHHHHHHHHHHHHHHhHhHHHcC-----------C---CHHHHhhhhhcEEEEecCCCchhhhhHHHH
Confidence 333333333444444455555554433322211 1 355678889999999999999999999999
Q ss_pred HHHHHHhccccccccchhhhccCCeeEEEecccCccccCceEEEEEEEcCeeee-------ecCCCCC--CCCCCCCChh
Q 003189 426 FAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKE-------VDNSKGT--PAFGSSIPAS 496 (840)
Q Consensus 426 ~~~~~l~~~~ilvr~~~a~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~-------~~~~~~~--~~~~~~~~~~ 496 (840)
++.+||.|+||.+-+++.+...|+.+++|||||||||++.+.+..+........ ...+... ..........
T Consensus 444 ~a~~RLkkk~IfCisP~rIn~~G~i~~~cFDKTGTLTEdGLDl~gv~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 523 (1140)
T KOG0208|consen 444 YAQSRLKKKGIFCISPQRINLCGKLNLVCFDKTGTLTEDGLDLWGVVPVERNVDDGPELKVVTEDSLQLFYKLSLRSSSL 523 (1140)
T ss_pred HHHHHHHhcCeEEcCccceeecceeeEEEEcCCCcccccceeEEEEEeccccccccchhhhhhhhhccceeeccccccCC
Confidence 999999999999999999999999999999999999999999988776432100 0000000 0000000001
Q ss_pred HHHHHHHHHHhcCCceEEecCCCceeEcCChhhHHHHHHHHHc-------CC-------------Ch-----HHHhh---
Q 003189 497 ASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLL-------GG-------------DF-----QAERQ--- 548 (840)
Q Consensus 497 ~~~~l~~~i~~~~~~~~~~~~~~~~~~~g~p~e~All~~~~~~-------~~-------------~~-----~~~~~--- 548 (840)
....+..+++.||+-.... ....|+|+|.-+.+....- +. .. +...+
T Consensus 524 ~~~~~~~a~atCHSL~~v~-----g~l~GDPLdlkmfe~t~w~~ee~~~~~~~~~~~~~~~p~v~~p~~~~~~~~t~~~~ 598 (1140)
T KOG0208|consen 524 PMGNLVAAMATCHSLTLVD-----GTLVGDPLDLKMFESTGWVYEEADIEDEATREFNTLIPTVVRPPENAFNQSTECGE 598 (1140)
T ss_pred chHHHHHHHhhhceeEEeC-----CeeccCceeeeeeeccceEEEeccccchhhhhhCCccCCEeCCCcccccCCCcCCC
Confidence 1234556667776433321 2457888877766543100 00 00 00001
Q ss_pred -ccceEEEecCCCCCceEEEEEEeCC-CcEEEEEcCchHHHHHhcccccccCCceeeCCHHHHHHHHHHHHHHHHcccce
Q 003189 549 -ASKIVKVEPFNSVKKQMGVVIELPE-GGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRT 626 (840)
Q Consensus 549 -~~~i~~~~pF~s~~k~~~vv~~~~~-~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~glr~ 626 (840)
.+.+++.+||+|.-+||||++..++ ....+|+|||||.|.+.|+. +.....+++.++.|+.+|+|+
T Consensus 599 ~~~si~k~feF~S~LrRMSVIv~~~~e~~~~~ftKGaPE~I~~ic~p------------~tvP~dy~evl~~Yt~~GfRV 666 (1140)
T KOG0208|consen 599 GEISIVKQFEFSSALRRMSVIVSTGGEDKMMVFTKGAPESIAEICKP------------ETVPADYQEVLKEYTHQGFRV 666 (1140)
T ss_pred cceEEEEecccchhhheEEEEEecCCCCceEeeccCCHHHHHHhcCc------------ccCCccHHHHHHHHHhCCeEE
Confidence 4678999999999999999999764 67899999999999999974 122356889999999999999
Q ss_pred eEEEEEEcCCC-----CCCCCCCCCCceeeeeeecccCCCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCcc
Q 003189 627 LCLACMEIGNE-----FSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILT 701 (840)
Q Consensus 627 l~~A~~~~~~~-----~~~~~~~~~~~~~~lg~~~~~D~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~ 701 (840)
||+|+|+++.. ....++..|+|++|+|++.|++++|++++.+|++|.+|+|+++|+||||..||..+||+||+..
T Consensus 667 IAlA~K~L~~~~~~~~~~~~Rd~vEs~l~FlGLiVmeNkLK~~T~~VI~eL~~AnIRtVMcTGDNllTaisVakeCgmi~ 746 (1140)
T KOG0208|consen 667 IALASKELETSTLQKAQKLSRDTVESNLEFLGLIVMENKLKEETKRVIDELNRANIRTVMCTGDNLLTAISVAKECGMIE 746 (1140)
T ss_pred EEEecCccCcchHHHHhhccHhhhhccceeeEEEEeecccccccHHHHHHHHhhcceEEEEcCCchheeeehhhcccccC
Confidence 99999999876 1234577899999999999999999999999999999999999999999999999999999986
Q ss_pred CCC-------------------------------------------------------ccccChhhhcC---CHHHHhhh
Q 003189 702 DNG-------------------------------------------------------IAIEGPEFREK---SDEELSKL 723 (840)
Q Consensus 702 ~~~-------------------------------------------------------~~~~g~~~~~~---~~~~~~~~ 723 (840)
+.. ++++|+.|+.+ ..+.+..+
T Consensus 747 p~~~v~~~~~~~~~~~~~~~i~w~~ve~~~~~~~~~~~~~~~~~~~~~~d~~~~~~yhlA~sG~~f~~i~~~~~~l~~~I 826 (1140)
T KOG0208|consen 747 PQVKVIIPELEPPEDDSIAQIVWLCVESQTQFLDPKEPDPDLASVKLSLDVLSEKDYHLAMSGKTFQVILEHFPELVPKI 826 (1140)
T ss_pred CCCeEEEEeccCCccCCCceeEEEEccCccccCCCCccCccccCCccChhhhccceeEEEecCchhHHHHhhcHHHHHHH
Confidence 432 56677777643 45677788
Q ss_pred cCCceEEEecCcccHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEEecCCCcHHHHhhcCEEeccCCchHHHHHH
Q 003189 724 IPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVA 803 (840)
Q Consensus 724 ~~~~~v~ar~~P~~K~~~V~~l~~~~g~~v~~~GDG~ND~~al~~Advgiamg~~g~~~ak~~aDivlldd~f~~i~~~i 803 (840)
+.+..||||++|.||.++|+.||+. |..|+|+|||.||+.|||+|||||+++. ..|.-+|.+.-.-.+.+++.++|
T Consensus 827 l~~~~VfARMsP~qK~~Lie~lQkl-~y~VgfCGDGANDCgALKaAdvGISLSe---aEASvAApFTSk~~~I~cVp~vI 902 (1140)
T KOG0208|consen 827 LLKGTVFARMSPDQKAELIEALQKL-GYKVGFCGDGANDCGALKAADVGISLSE---AEASVAAPFTSKTPSISCVPDVI 902 (1140)
T ss_pred HhcCeEEeecCchhHHHHHHHHHhc-CcEEEecCCCcchhhhhhhcccCcchhh---hhHhhcCccccCCCchhhHhHHH
Confidence 8899999999999999999999988 9999999999999999999999999973 23566788887777899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003189 804 KWGRSVYINIQKFVQFQLTVNVVALIV 830 (840)
Q Consensus 804 ~~gR~~~~~i~k~i~f~l~~N~~~l~~ 830 (840)
++||+..-.--..++|...|.++..+.
T Consensus 903 rEGRaALVTSf~~FkYMalYs~iqFis 929 (1140)
T KOG0208|consen 903 REGRAALVTSFACFKYMALYSAIQFIS 929 (1140)
T ss_pred hhhhhhhhhhHHHHHHHHHHHHHHHHh
Confidence 999999999888889988888765443
No 24
>KOG0205 consensus Plasma membrane H+-transporting ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.1e-83 Score=690.60 Aligned_cols=635 Identities=24% Similarity=0.384 Sum_probs=507.8
Q ss_pred HhcCHHHHHHHhCCCcCCCCCccHHHHHHHHHhcCCCCCCCCCCccHHHHHHHHHhhhHHHHHHHHHHHHHHhhhcccCC
Q 003189 117 VHGGVEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCALVSLVVGIATEGW 196 (840)
Q Consensus 117 ~~~gv~~l~~~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~~f~~~~~~~l~~~~~~il~i~a~is~~~~~~~~~~ 196 (840)
..+.++.+.+.|...-+ ||++++ +++|++.||.|++.+++...|.+|+ .-+.+|.-++.-.+|++...+.-- .|.
T Consensus 19 ~~~p~eeVfeeL~~t~~-GLt~~E--~~eRlk~fG~NkleEkken~~lKFl-~Fm~~PlswVMEaAAimA~~Lang-~~~ 93 (942)
T KOG0205|consen 19 EAIPIEEVFEELLCTRE-GLTSDE--VEERLKIFGPNKLEEKKESKFLKFL-GFMWNPLSWVMEAAAIMAIGLANG-GGR 93 (942)
T ss_pred ccCchhhhHHHHhcCCC-CCchHH--HHHHHHhhCchhhhhhhhhHHHHHH-HHHhchHHHHHHHHHHHHHHHhcC-CCC
Confidence 34567777776666544 999988 9999999999999877666665543 344567677777788776655422 344
Q ss_pred CCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHhHhHhhhcCceEEEEECCeEEEEeccCCCCCcEEEecCCCcccccEEE
Q 003189 197 PKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLF 276 (840)
Q Consensus 197 ~~~~~d~~~i~~~illv~~v~~~~~~~~~~~~~~l~~~~~~~~v~V~RdG~~~~I~~~dLvvGDIV~l~~Gd~VPaDgvl 276 (840)
+..|-|.+.|...+++...++.+.+|..-+....|.+.+. .+.+|+|||+|.++.+++||||||+.++.||+|||||++
T Consensus 94 ~~DW~DF~gI~~LLliNsti~FveE~nAGn~aa~L~a~LA-~KakVlRDGkw~E~eAs~lVPGDIlsik~GdIiPaDaRL 172 (942)
T KOG0205|consen 94 PPDWQDFVGICCLLLINSTISFIEENNAGNAAAALMAGLA-PKAKVLRDGKWSEQEASILVPGDILSIKLGDIIPADARL 172 (942)
T ss_pred CcchhhhhhhheeeeecceeeeeeccccchHHHHHHhccC-cccEEeecCeeeeeeccccccCceeeeccCCEecCccce
Confidence 6789999888877777777777777766666677766443 478999999999999999999999999999999999999
Q ss_pred EeecceEEecccccCCCCccccCCCCCeEEeccEEeeceEEEEEEEEcccchHHHHHHhhcCCCCCCChHHHHHHHHHHH
Q 003189 277 VSGFSVLINESSLTGESEPVNVNALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATI 356 (840)
Q Consensus 277 l~g~~l~VDES~LTGES~pv~k~~~~~~l~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~~~tplq~~l~~~a~~ 356 (840)
++|+-|.||+|.|||||.||.|.++++ +||||.|.+|++.|+|++||.+|..|+-..++... ...--+|+-++.+.++
T Consensus 173 l~gD~LkiDQSAlTGESLpvtKh~gd~-vfSgSTcKqGE~eaVViATg~~TF~GkAA~LVdst-~~~GHFqkVLt~IGn~ 250 (942)
T KOG0205|consen 173 LEGDPLKIDQSALTGESLPVTKHPGDE-VFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST-NQVGHFQKVLTGIGNF 250 (942)
T ss_pred ecCCccccchhhhcCCccccccCCCCc-eecccccccceEEEEEEEeccceeehhhHHhhcCC-CCcccHHHHHHhhhhH
Confidence 999999999999999999999999998 99999999999999999999999999999999884 4458899888887776
Q ss_pred HHHHHHHHHHHHHHHHHHhHhhhcccCCCccccCCcChHHHHHHHHHHHHHHHHh-cCCchHHHHHHHHHHHHHHHhccc
Q 003189 357 IGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVA-VPEGLPLAVTLSLAFAMKKMMNDK 435 (840)
Q Consensus 357 ~~~~~l~~a~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ai~ilvva-~P~~Lplav~l~l~~~~~~l~~~~ 435 (840)
+...+. +-.++.+...|..+. ...+.....+.++++. +|.|+|..++.+++.+..+|.++|
T Consensus 251 ci~si~---~g~lie~~vmy~~q~---------------R~~r~~i~nLlvllIGgiPiamPtVlsvTMAiGs~rLaqqg 312 (942)
T KOG0205|consen 251 CICSIA---LGMLIEITVMYPIQH---------------RLYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQG 312 (942)
T ss_pred HHHHHH---HHHHHHHHhhhhhhh---------------hhhhhhhhheheeeecccccccceeeeehhhHHHHHHHhcc
Confidence 543221 111222222222111 1223334455666666 999999999999999999999999
Q ss_pred cccccchhhhccCCeeEEEecccCccccCceEEEE--EEEcCeeeeecCCCCCCCCCCCCChhHHHHHHHHHHhcCCceE
Q 003189 436 ALVRHLAACETMGSATSICSDKTGTLTTNHMTVLK--ACICEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEV 513 (840)
Q Consensus 436 ilvr~~~a~E~lg~v~~I~~DKTGTLT~n~m~v~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~ 513 (840)
+++++++|+|.|+.++++|+|||||||.|+++|.+ +.+. ....+++.+-+. .|..+ ..
T Consensus 313 AItkrmtAIEemAGmdVLCSDKTGTLTlNkLSvdknl~ev~---------------v~gv~~D~~~L~---A~rAs--r~ 372 (942)
T KOG0205|consen 313 AITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVF---------------VKGVDKDDVLLT---AARAS--RK 372 (942)
T ss_pred cHHHHHHHHHHhhCceEEeecCcCceeecceecCcCcceee---------------ecCCChHHHHHH---HHHHh--hh
Confidence 99999999999999999999999999999999976 2111 111122222111 11111 11
Q ss_pred EecCCCceeEcCChhhHHHHHHHHHcCCChHHHhhccceEEEecCCCCCceEEEEEEeCCCcEEEEEcCchHHHHHhccc
Q 003189 514 VIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDK 593 (840)
Q Consensus 514 ~~~~~~~~~~~g~p~e~All~~~~~~~~~~~~~~~~~~i~~~~pF~s~~k~~~vv~~~~~~~~~~~~KGa~e~il~~c~~ 593 (840)
+ ..+.+|.|++.... ++.+.+..++.++..|||+..||....+..++|..+...|||||.|++.|+.
T Consensus 373 e---------n~DAID~A~v~~L~----dPKeara~ikevhF~PFnPV~Krta~ty~d~dG~~~r~sKGAPeqil~l~~~ 439 (942)
T KOG0205|consen 373 E---------NQDAIDAAIVGMLA----DPKEARAGIKEVHFLPFNPVDKRTALTYIDPDGNWHRVSKGAPEQILKLCNE 439 (942)
T ss_pred c---------ChhhHHHHHHHhhc----CHHHHhhCceEEeeccCCccccceEEEEECCCCCEEEecCCChHHHHHHhhc
Confidence 1 34789999987654 3578888999999999999999999999999999999999999999999973
Q ss_pred ccccCCceeeCCHHHHHHHHHHHHHHHHcccceeEEEEEEcCCCCCCCCCCCCCceeeeeeecccCCCCcchHHHHHHHH
Q 003189 594 FLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICR 673 (840)
Q Consensus 594 ~~~~~g~~~~l~~~~~~~~~~~~~~~~~~glr~l~~A~~~~~~~~~~~~~~~~~~~~~lg~~~~~D~lR~~~~~aI~~l~ 673 (840)
+.+.++.+.+.+++|+++|+|.+++|++..++... +.....+.|+|+.-+-||+|.+..++|++..
T Consensus 440 -----------~~~i~~~vh~~id~~AeRGlRSLgVArq~v~e~~~---~~~g~pw~~~gllp~fdpprhdsa~tirral 505 (942)
T KOG0205|consen 440 -----------DHDIPERVHSIIDKFAERGLRSLAVARQEVPEKTK---ESPGGPWEFVGLLPLFDPPRHDSAETIRRAL 505 (942)
T ss_pred -----------cCcchHHHHHHHHHHHHhcchhhhhhhhccccccc---cCCCCCcccccccccCCCCccchHHHHHHHH
Confidence 34566788999999999999999999998776422 3344668899999999999999999999999
Q ss_pred hCCCEEEEEcCCCHHHHHHHHHHcCCccC--CCccccChhhh-cCCHHHHhhhcCCceEEEecCcccHHHHHHHHHHhCC
Q 003189 674 SAGITVRMVTGDNINTAKAIARECGILTD--NGIAIEGPEFR-EKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLG 750 (840)
Q Consensus 674 ~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~--~~~~~~g~~~~-~~~~~~~~~~~~~~~v~ar~~P~~K~~~V~~l~~~~g 750 (840)
..|++|.|+|||...-++..++++|+-+. ++..+-|..-. ++.-.+..+.+.+..-||.+.|++|+.+|+.||++ |
T Consensus 506 ~lGv~VkmitgdqlaI~keTgrrlgmgtnmypss~llG~~~~~~~~~~~v~elie~adgfAgVfpehKy~iV~~Lq~r-~ 584 (942)
T KOG0205|consen 506 NLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGLGKDGSMPGSPVDELIEKADGFAGVFPEHKYEIVKILQER-K 584 (942)
T ss_pred hccceeeeecchHHHHHHhhhhhhccccCcCCchhhccCCCCCCCCCCcHHHHhhhccCccccCHHHHHHHHHHHhhc-C
Confidence 99999999999999999999999998542 11111121111 12223345555566689999999999999999999 9
Q ss_pred CEEEEEcCCccCHHHhhhCCccEEecCCCcHHHHhhcCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003189 751 EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVV 826 (840)
Q Consensus 751 ~~v~~~GDG~ND~~al~~Advgiamg~~g~~~ak~~aDivlldd~f~~i~~~i~~gR~~~~~i~k~i~f~l~~N~~ 826 (840)
|.++|+|||+||+|+|+.||+|||+. .++|.|+.+||||+++..++.|+.++..+|.+|++++.+..|++...+-
T Consensus 585 hi~gmtgdgvndapaLKkAdigiava-~atdaar~asdiVltepglSviI~avltSraIfqrmknytiyavsitir 659 (942)
T KOG0205|consen 585 HIVGMTGDGVNDAPALKKADIGIAVA-DATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIR 659 (942)
T ss_pred ceecccCCCcccchhhcccccceeec-cchhhhcccccEEEcCCCchhhHHHHHHHHHHHHHHhhheeeeehhHHH
Confidence 99999999999999999999999999 9999999999999999999999999999999999999998887665543
No 25
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=100.00 E-value=6.4e-80 Score=717.26 Aligned_cols=535 Identities=27% Similarity=0.384 Sum_probs=426.7
Q ss_pred CccHHHHHHHHHhhhHHHH--HHHHHH-HHHHhhh---ccc-----CCCCCcchhHHHHHHHHHH-HHHHHHHHHHHHHH
Q 003189 160 ARGFWVYVWEALHDMTLMI--LAVCAL-VSLVVGI---ATE-----GWPKGAHDGLGIVMSILLV-VFVTATSDYKQSLQ 227 (840)
Q Consensus 160 ~~~f~~~~~~~l~~~~~~i--l~i~a~-is~~~~~---~~~-----~~~~~~~d~~~i~~~illv-~~v~~~~~~~~~~~ 227 (840)
+.||++.+|+.++...+.+ |+..++ .+++++. ... +..++||++++++++++++ -.+....+++.++.
T Consensus 2 g~~~~~~a~~~l~~~~~~md~l~~~~~~~a~~~s~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~~le~~~~~~a~~~ 81 (562)
T TIGR01511 2 GRPFYKSAWKALRHKAPNMDTLIALGTTVAYGYSLVALLANQVLTGLHVHTFFDASAMLITFILLGRWLEMLAKGRASDA 81 (562)
T ss_pred cHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHhhcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5689999999998665433 222222 2233222 111 1235789988876665554 12232333333333
Q ss_pred HhHhHhhhcCceEEEEEC-CeEEEEeccCCCCCcEEEecCCCcccccEEEEeecceEEecccccCCCCccccCCCCCeEE
Q 003189 228 FKDLDREKKKITVQVARN-GFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNALNPFLL 306 (840)
Q Consensus 228 ~~~l~~~~~~~~v~V~Rd-G~~~~I~~~dLvvGDIV~l~~Gd~VPaDgvll~g~~l~VDES~LTGES~pv~k~~~~~~l~ 306 (840)
.++|.+ ..+..++|+|+ |.+++|++++|+|||+|.|++||+|||||++++|++ .||||+|||||.|+.|..++. ||
T Consensus 82 ~~~L~~-~~p~~a~~~~~~~~~~~v~~~~l~~GDii~v~~Ge~iP~Dg~v~~g~~-~vdes~lTGEs~pv~k~~gd~-V~ 158 (562)
T TIGR01511 82 LSKLAK-LQPSTATLLTKDGSIEEVPVALLQPGDIVKVLPGEKIPVDGTVIEGES-EVDESLVTGESLPVPKKVGDP-VI 158 (562)
T ss_pred HHHHHh-cCCCEEEEEECCCeEEEEEHHHCCCCCEEEECCCCEecCceEEEECce-EEehHhhcCCCCcEEcCCCCE-EE
Confidence 334443 34568888885 777999999999999999999999999999999985 999999999999999998875 99
Q ss_pred eccEEeeceEEEEEEEEcccchHHHHHHhhcCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhcccCCCc
Q 003189 307 SGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTH 386 (840)
Q Consensus 307 sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~~~tplq~~l~~~a~~~~~~~l~~a~~~~~v~~~~~~~~~~~~~~~ 386 (840)
+||.+.+|+++++|+++|.+|.+|+|.+++.+++.+++|+|+.++++++++.++++++++++|++|.
T Consensus 159 aGt~~~~g~~~~~v~~~g~~t~~~~i~~~v~~a~~~k~~~~~~~d~~a~~~~~~v~~~a~~~~~~~~------------- 225 (562)
T TIGR01511 159 AGTVNGTGSLVVRATATGEDTTLAQIVRLVRQAQQSKAPIQRLADKVAGYFVPVVIAIALITFVIWL------------- 225 (562)
T ss_pred eeeEECCceEEEEEEEecCCChHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHH-------------
Confidence 9999999999999999999999999999999999999999999999999999999999888887652
Q ss_pred cccCCcChHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHhccccccccchhhhccCCeeEEEecccCccccCce
Q 003189 387 WTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHM 466 (840)
Q Consensus 387 ~~~~~~~~~~~~~~~~~ai~ilvva~P~~Lplav~l~l~~~~~~l~~~~ilvr~~~a~E~lg~v~~I~~DKTGTLT~n~m 466 (840)
..+..++++++++|||+|++++|+++..++.+++++|+++|+++++|+|+++|+||||||||||+|+|
T Consensus 226 ------------~~~~~~~svlvvacPcaL~la~p~a~~~~~~~aa~~gIlik~~~~lE~l~~v~~i~fDKTGTLT~g~~ 293 (562)
T TIGR01511 226 ------------FALEFAVTVLIIACPCALGLATPTVIAVATGLAAKNGVLIKDGDALERAANIDTVVFDKTGTLTQGKP 293 (562)
T ss_pred ------------HHHHHHHHHHHHhccchhhhHHHHHHHHHHHHHHHCCeEEcChHHHHHhhCCCEEEECCCCCCcCCCE
Confidence 25677999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEEEcCeeeeecCCCCCCCCCCCCChhHHHHHHHHHHhcCCceEEecCCCceeEcCChhhHHHHHHHHHcCCChHHH
Q 003189 467 TVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAE 546 (840)
Q Consensus 467 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~g~p~e~All~~~~~~~~~~~~~ 546 (840)
+|.++...+... .++.+.+. ... + ..+.||+++|+++++.+.+.+...
T Consensus 294 ~v~~i~~~~~~~---------------~~~~l~~a---a~~------e-------~~s~HPia~Ai~~~~~~~~~~~~~- 341 (562)
T TIGR01511 294 TVTDVHVFGDRD---------------RTELLALA---AAL------E-------AGSEHPLAKAIVSYAKEKGITLVE- 341 (562)
T ss_pred EEEEEecCCCCC---------------HHHHHHHH---HHH------h-------ccCCChHHHHHHHHHHhcCCCcCC-
Confidence 999986543210 11222221 111 1 126799999999999776543211
Q ss_pred hhccceEEEecCCCCCceEEEEEEeCCCcEEEEEcCchHHHHHhcccccccCCceeeCCHHHHHHHHHHHHHHHHcccce
Q 003189 547 RQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRT 626 (840)
Q Consensus 547 ~~~~~i~~~~pF~s~~k~~~vv~~~~~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~glr~ 626 (840)
..-.+.+| ..++....++.. +..|+++.+.+ ++. .++ .+.++|.++
T Consensus 342 ---~~~~~~~~------g~Gi~~~~~g~~---~~iG~~~~~~~--------~~~--~~~------------~~~~~g~~~ 387 (562)
T TIGR01511 342 ---VSDFKAIP------GIGVEGTVEGTK---IQLGNEKLLGE--------NAI--KID------------GKAEQGSTS 387 (562)
T ss_pred ---CCCeEEEC------CceEEEEECCEE---EEEECHHHHHh--------CCC--CCC------------hhhhCCCEE
Confidence 00011111 112222222222 33477665432 111 111 123578888
Q ss_pred eEEEEEEcCCCCCCCCCCCCCceeeeeeecccCCCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCcc
Q 003189 627 LCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIA 706 (840)
Q Consensus 627 l~~A~~~~~~~~~~~~~~~~~~~~~lg~~~~~D~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~ 706 (840)
+.++ .+.+++|++.++|++||+++++|++|++.|+++.|+|||+..++.++++++||.
T Consensus 388 ~~~~----------------~~~~~~g~~~~~d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~lgi~------ 445 (562)
T TIGR01511 388 VLVA----------------VNGELAGVFALEDQLRPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELGIN------ 445 (562)
T ss_pred EEEE----------------ECCEEEEEEEecccccHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCc------
Confidence 7775 467899999999999999999999999999999999999999999999999993
Q ss_pred ccChhhhcCCHHHHhhhcCCceEEEecCcccHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEEecCCCcHHHHhh
Q 003189 707 IEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKES 786 (840)
Q Consensus 707 ~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~~V~~l~~~~g~~v~~~GDG~ND~~al~~Advgiamg~~g~~~ak~~ 786 (840)
++++..|++|..+++.++++ |+.|+|+|||.||+||++.||+||+|| .+++.+++.
T Consensus 446 ----------------------~~~~~~p~~K~~~v~~l~~~-~~~v~~VGDg~nD~~al~~A~vgia~g-~g~~~a~~~ 501 (562)
T TIGR01511 446 ----------------------VRAEVLPDDKAALIKELQEK-GRVVAMVGDGINDAPALAQADVGIAIG-AGTDVAIEA 501 (562)
T ss_pred ----------------------EEccCChHHHHHHHHHHHHc-CCEEEEEeCCCccHHHHhhCCEEEEeC-CcCHHHHhh
Confidence 78889999999999999998 999999999999999999999999999 899999999
Q ss_pred cCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003189 787 ADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSS 834 (840)
Q Consensus 787 aDivlldd~f~~i~~~i~~gR~~~~~i~k~i~f~l~~N~~~l~~~~~~ 834 (840)
||+++++|++..|.+++++||+++++|++|+.|+++||++++++++.+
T Consensus 502 Advvl~~~~l~~l~~~i~lsr~~~~~i~qn~~~a~~~n~~~i~la~~~ 549 (562)
T TIGR01511 502 ADVVLMRNDLNDVATAIDLSRKTLRRIKQNLLWAFGYNVIAIPIAAGV 549 (562)
T ss_pred CCEEEeCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 999999999999999999999999999999999999999999998743
No 26
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=100.00 E-value=3.6e-79 Score=713.32 Aligned_cols=512 Identities=28% Similarity=0.379 Sum_probs=428.3
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHhHhHhhhcCceEEEEECC-eEEEEeccCCCCCcEEEecCCCcccccEEEEe
Q 003189 200 AHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNG-FRRKISIYDLLPGDIVHLCMGDQVPADGLFVS 278 (840)
Q Consensus 200 ~~d~~~i~~~illv~~v~~~~~~~~~~~~~~l~~~~~~~~v~V~RdG-~~~~I~~~dLvvGDIV~l~~Gd~VPaDgvll~ 278 (840)
|.++..+++.+++..++....+++.++..++|.+ ..+..++|+||| ++++|+.+||+|||+|.+++||+|||||++++
T Consensus 18 ~~~~~~i~~~~~~~~~i~~~~~~~~~~~l~~l~~-~~~~~~~v~r~~g~~~~i~~~~l~~GDiv~v~~G~~iP~Dg~vi~ 96 (556)
T TIGR01525 18 VLEGALLLFLFLLGETLEERAKGRASDALSALLA-LAPSTARVLQGDGSEEEVPVEELQVGDIVIVRPGERIPVDGVVIS 96 (556)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCCCEEEEEECCCeEEEEEHHHCCCCCEEEECCCCEeccceEEEe
Confidence 6677766666666666666666666666666654 445689999995 99999999999999999999999999999999
Q ss_pred ecceEEecccccCCCCccccCCCCCeEEeccEEeeceEEEEEEEEcccchHHHHHHhhcCCCCCCChHHHHHHHHHHHHH
Q 003189 279 GFSVLINESSLTGESEPVNVNALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIG 358 (840)
Q Consensus 279 g~~l~VDES~LTGES~pv~k~~~~~~l~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~~~tplq~~l~~~a~~~~ 358 (840)
|+ +.||||+|||||.|+.|.+++ .+|+||.+.+|+++++|+++|.+|++|++.+++.+...+++|+|+.+++++.++.
T Consensus 97 g~-~~vdes~lTGEs~pv~k~~g~-~v~aGt~v~~g~~~~~v~~~g~~t~~~~i~~~~~~~~~~~~~~~~~~~~~a~~~~ 174 (556)
T TIGR01525 97 GE-SEVDESALTGESMPVEKKEGD-EVFAGTINGDGSLTIRVTKLGEDSTLAQIVKLVEEAQSSKAPIQRLADRIASYYV 174 (556)
T ss_pred cc-eEEeehhccCCCCCEecCCcC-EEeeceEECCceEEEEEEEecccCHHHHHHHHHHHHhhcCCcHHHHHHHHHHHHH
Confidence 97 599999999999999999876 5999999999999999999999999999999999888889999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhHhhhcccCCCccccCCcChHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHhcccccc
Q 003189 359 KIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALV 438 (840)
Q Consensus 359 ~~~l~~a~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ai~ilvva~P~~Lplav~l~l~~~~~~l~~~~ilv 438 (840)
++++++++++|++|+.... . ..+..++++++++|||+||+++|++++.++++|.++|+++
T Consensus 175 ~~~l~~a~~~~~~~~~~~~------------------~--~~~~~~~~vlv~~~P~al~l~~~~~~~~~~~~~~~~gilv 234 (556)
T TIGR01525 175 PAVLAIALLTFVVWLALGA------------------L--GALYRALAVLVVACPCALGLATPVAILVAIGVAARRGILI 234 (556)
T ss_pred HHHHHHHHHHHHHHHHhcc------------------c--hHHHHHHHHHhhccccchhehhHHHHHHHHHHHHHCCcee
Confidence 9999999999887653210 0 5678899999999999999999999999999999999999
Q ss_pred ccchhhhccCCeeEEEecccCccccCceEEEEEEEcCeeeeecCCCCCCCCCCCCChhHHHHHHHHHHhcCCceEEecCC
Q 003189 439 RHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEG 518 (840)
Q Consensus 439 r~~~a~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~ 518 (840)
|+++++|+||++|++|||||||||+|+|+|.+++..+... ...++.+.+ +... +
T Consensus 235 k~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~~~~~~-------------~~~~~~l~~---a~~~------e---- 288 (556)
T TIGR01525 235 KGGDALEKLAKVKTVVFDKTGTLTTGKPTVVDVEPLDDAS-------------ISEEELLAL---AAAL------E---- 288 (556)
T ss_pred cCchHHHHhhcCCEEEEeCCCCCcCCceEEEEEEecCCCC-------------ccHHHHHHH---HHHH------h----
Confidence 9999999999999999999999999999999987643220 001122221 1111 1
Q ss_pred CceeEcCChhhHHHHHHHHHcCCChHHHhhccceEEEecCCCCCceEEEEEEeCCCcEEEEEcCchHHHHHhcccccccC
Q 003189 519 NKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSN 598 (840)
Q Consensus 519 ~~~~~~g~p~e~All~~~~~~~~~~~~~~~~~~i~~~~pF~s~~k~~~vv~~~~~~~~~~~~KGa~e~il~~c~~~~~~~ 598 (840)
..+.||+++|+++++.+.+.+... +| . ....++.++..+++|+++..+..|+.. ..+
T Consensus 289 ---~~~~hp~~~Ai~~~~~~~~~~~~~-----------~~--~------~~~~~~~gi~~~~~g~~~~~lg~~~~~-~~~ 345 (556)
T TIGR01525 289 ---QSSSHPLARAIVRYAKKRGLELPK-----------QE--D------VEEVPGKGVEATVDGQEEVRIGNPRLL-ELA 345 (556)
T ss_pred ---ccCCChHHHHHHHHHHhcCCCccc-----------cc--C------eeEecCCeEEEEECCeeEEEEecHHHH-hhc
Confidence 126799999999999877654211 11 0 012234456666666656666666532 111
Q ss_pred CceeeCCHHHHHHHHHHHHHHHHcccceeEEEEEEcCCCCCCCCCCCCCceeeeeeecccCCCCcchHHHHHHHHhCC-C
Q 003189 599 GEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAG-I 677 (840)
Q Consensus 599 g~~~~l~~~~~~~~~~~~~~~~~~glr~l~~A~~~~~~~~~~~~~~~~~~~~~lg~~~~~D~lR~~~~~aI~~l~~aG-i 677 (840)
+.. ...+++.++.++.+|+|++.++ .|.+++|.+.++|++||+++++++.|+++| +
T Consensus 346 ~~~-------~~~~~~~~~~~~~~g~~~~~v~----------------~~~~~~g~i~~~d~~~~g~~e~l~~L~~~g~i 402 (556)
T TIGR01525 346 AEP-------ISASPDLLNEGESQGKTVVFVA----------------VDGELLGVIALRDQLRPEAKEAIAALKRAGGI 402 (556)
T ss_pred CCC-------chhhHHHHHHHhhCCcEEEEEE----------------ECCEEEEEEEecccchHhHHHHHHHHHHcCCC
Confidence 111 1112345667888999999887 346899999999999999999999999999 9
Q ss_pred EEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCcccHHHHHHHHHHhCCCEEEEEc
Q 003189 678 TVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTG 757 (840)
Q Consensus 678 ~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~~V~~l~~~~g~~v~~~G 757 (840)
++.|+|||+..++.++++++|+.. +|++..|++|..+++.++.. |+.|+|+|
T Consensus 403 ~v~ivTgd~~~~a~~i~~~lgi~~---------------------------~f~~~~p~~K~~~v~~l~~~-~~~v~~vG 454 (556)
T TIGR01525 403 KLVMLTGDNRSAAEAVAAELGIDE---------------------------VHAELLPEDKLAIVKELQEE-GGVVAMVG 454 (556)
T ss_pred eEEEEeCCCHHHHHHHHHHhCCCe---------------------------eeccCCHHHHHHHHHHHHHc-CCEEEEEE
Confidence 999999999999999999999964 89999999999999999988 89999999
Q ss_pred CCccCHHHhhhCCccEEecCCCcHHHHhhcCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 003189 758 DGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSA 835 (840)
Q Consensus 758 DG~ND~~al~~Advgiamg~~g~~~ak~~aDivlldd~f~~i~~~i~~gR~~~~~i~k~i~f~l~~N~~~l~~~~~~~ 835 (840)
||.||+||+++||+|++|| .+++.+++.||+++.+|+++.|++++++||+++.||++|+.|+++||++++++++.+.
T Consensus 455 Dg~nD~~al~~A~vgia~g-~~~~~~~~~Ad~vi~~~~~~~l~~~i~~~r~~~~~i~~nl~~a~~~N~~~i~~a~~g~ 531 (556)
T TIGR01525 455 DGINDAPALAAADVGIAMG-AGSDVAIEAADIVLLNDDLSSLPTAIDLSRKTRRIIKQNLAWALGYNLVAIPLAAGGL 531 (556)
T ss_pred CChhHHHHHhhCCEeEEeC-CCCHHHHHhCCEEEeCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999 8999999999999999999999999999999999999999999999999999998664
No 27
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.
Probab=100.00 E-value=1.3e-78 Score=702.30 Aligned_cols=480 Identities=39% Similarity=0.601 Sum_probs=424.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHhHh-hhcCceEEEEECCeEEEEeccCCCCCcEEEecCCCcccccEEEEeecceEEecc
Q 003189 209 SILLVVFVTATSDYKQSLQFKDLDR-EKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINES 287 (840)
Q Consensus 209 ~illv~~v~~~~~~~~~~~~~~l~~-~~~~~~v~V~RdG~~~~I~~~dLvvGDIV~l~~Gd~VPaDgvll~g~~l~VDES 287 (840)
++++..++..+.+++.++..+++.+ ..++..++|+|+| +++|++++|+|||+|.+++||+|||||++++|+ +.||||
T Consensus 5 ~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~v~r~g-~~~V~~~~l~~GDiv~v~~G~~iP~Dg~vl~g~-~~vdes 82 (499)
T TIGR01494 5 LVLLFALVEVAAKRAAEDAIRSLKDLLVNPETVTVLRNG-WKEIPASDLVPGDIVLVKSGEIVPADGVLLSGS-CFVDES 82 (499)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhccCCCCeEEEEECC-eEEEEHHHCCCCCEEEECCCCEeeeeEEEEEcc-EEEEcc
Confidence 4456666777778888888888876 3567799999999 999999999999999999999999999999995 699999
Q ss_pred cccCCCCccccCCCCCeEEeccEEeeceEEEEEEEEcccchHHHHHHhhcCCCCCCChHHHHHHHHH-HHHHHHHHHHHH
Q 003189 288 SLTGESEPVNVNALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVA-TIIGKIGLFFAV 366 (840)
Q Consensus 288 ~LTGES~pv~k~~~~~~l~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~~~tplq~~l~~~a-~~~~~~~l~~a~ 366 (840)
+|||||.|+.|.+++. +++||.+.+|++++.|+.+|.+|..+++...+.++...++|+++++++++ .++.++.+++++
T Consensus 83 ~LTGEs~pv~k~~g~~-v~~gs~~~~G~~~~~v~~~~~~s~~~~i~~~v~~~~~~k~~~~~~~~~~~~~~~~~~~~~la~ 161 (499)
T TIGR01494 83 NLTGESVPVLKTAGDA-VFAGTYVFNGTLIVVVSATGPNTFGGKIAVVVYTGFETKTPLQPKLDRLSDIIFILFVLLIAL 161 (499)
T ss_pred cccCCCCCeeeccCCc-cccCcEEeccEEEEEEEEeccccHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999998776 99999999999999999999999999999999888877899999999999 788888888888
Q ss_pred HHHHHHHHhHhhhcccCCCccccCCcChHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHhccccccccchhhhc
Q 003189 367 VTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACET 446 (840)
Q Consensus 367 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ai~ilvva~P~~Lplav~l~l~~~~~~l~~~~ilvr~~~a~E~ 446 (840)
+++++|+..+.. .. .+...+..++++++++|||+||+++|+++..+..+|.++|+++|+++++|+
T Consensus 162 ~~~~~~~~~~~~------------~~---~~~~~~~~~~~vl~~~~P~aL~~~~~~~~~~~~~~~~~~gilvk~~~~lE~ 226 (499)
T TIGR01494 162 AVFLFWAIGLWD------------PN---SIFKIFLRALILLVIAIPIALPLAVTIALAVGDARLAKKGIVVRSLNALEE 226 (499)
T ss_pred HHHHHHHHHHcc------------cc---cHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHCCcEEechhhhhh
Confidence 888776532210 00 245778999999999999999999999999999999999999999999999
Q ss_pred cCCeeEEEecccCccccCceEEEEEEEcCeeeeecCCCCCCCCCCCCChhHHHHHHHHHHhcCCceEEecCCCceeEcCC
Q 003189 447 MGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGT 526 (840)
Q Consensus 447 lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~g~ 526 (840)
||+++++|||||||||+|+|+|.++++.+. ...++|
T Consensus 227 l~~v~~i~fDKTGTLT~~~~~v~~~~~~~~--------------------------------------------~~~s~h 262 (499)
T TIGR01494 227 LGKVDYICSDKTGTLTKNEMSFKKVSVLGG--------------------------------------------EYLSGH 262 (499)
T ss_pred ccCCcEEEeeCCCccccCceEEEEEEecCC--------------------------------------------CcCCCC
Confidence 999999999999999999999998865321 012789
Q ss_pred hhhHHHHHHHHHcCCChHHHhhccceEEEecCCCCCceEEEEEEeCCCcEEEEEcCchHHHHHhcccccccCCceeeCCH
Q 003189 527 PTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGEVVPLNE 606 (840)
Q Consensus 527 p~e~All~~~~~~~~~~~~~~~~~~i~~~~pF~s~~k~~~vv~~~~~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~ 606 (840)
|+|.|+++++.... ++..||++.+++|+++++.+++ .++||+++.+++.|..
T Consensus 263 p~~~ai~~~~~~~~------------~~~~~f~~~~~~~~~~~~~~~~---~~~~G~~~~i~~~~~~------------- 314 (499)
T TIGR01494 263 PDERALVKSAKWKI------------LNVFEFSSVRKRMSVIVRGPDG---TYVKGAPEFVLSRVKD------------- 314 (499)
T ss_pred hHHHHHHHHhhhcC------------cceeccCCCCceEEEEEecCCc---EEEeCCHHHHHHhhHH-------------
Confidence 99999999886421 2468999999999998875333 4789999999988852
Q ss_pred HHHHHHHHHHHHHHHcccceeEEEEEEcCCCCCCCCCCCCCceeeeeeecccCCCCcchHHHHHHHHhCCCEEEEEcCCC
Q 003189 607 AAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDN 686 (840)
Q Consensus 607 ~~~~~~~~~~~~~~~~glr~l~~A~~~~~~~~~~~~~~~~~~~~~lg~~~~~D~lR~~~~~aI~~l~~aGi~v~m~TGD~ 686 (840)
+.+..+.++.+|+|++++|++ .+++|+++++|++||+++++|+.|+++|++++|+|||+
T Consensus 315 -----~~~~~~~~~~~g~~~~~~a~~----------------~~~~g~i~l~d~lr~~~~~~i~~l~~~gi~~~~ltGD~ 373 (499)
T TIGR01494 315 -----LEEKVKELAQSGLRVLAVASK----------------ETLLGLLGLEDPLRDDAKETISELREAGIRVIMLTGDN 373 (499)
T ss_pred -----HHHHHHHHHhCCCEEEEEEEC----------------CeEEEEEEecCCCchhHHHHHHHHHHCCCeEEEEcCCC
Confidence 123344677899999999964 26899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCcccHHHHHHHHHHhCCCEEEEEcCCccCHHHh
Q 003189 687 INTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPAL 766 (840)
Q Consensus 687 ~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~~V~~l~~~~g~~v~~~GDG~ND~~al 766 (840)
..+|..+|+++|| +++++|+||.++|+.+|+. |+.|+|+|||.||+|||
T Consensus 374 ~~~a~~ia~~lgi------------------------------~~~~~p~~K~~~v~~l~~~-g~~v~~vGDg~nD~~al 422 (499)
T TIGR01494 374 VLTAKAIAKELGI------------------------------FARVTPEEKAALVEALQKK-GRVVAMTGDGVNDAPAL 422 (499)
T ss_pred HHHHHHHHHHcCc------------------------------eeccCHHHHHHHHHHHHHC-CCEEEEECCChhhHHHH
Confidence 9999999999986 5789999999999999998 99999999999999999
Q ss_pred hhCCccEEecCCCcHHHHhhcCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 003189 767 HEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSAC 836 (840)
Q Consensus 767 ~~Advgiamg~~g~~~ak~~aDivlldd~f~~i~~~i~~gR~~~~~i~k~i~f~l~~N~~~l~~~~~~~~ 836 (840)
++|||||+|| ++++||++|++|++..++.++++||+++.++++|+.|.++||++.+++++.+.+
T Consensus 423 ~~Advgia~~------a~~~adivl~~~~l~~i~~~~~~~r~~~~~i~~~~~~~~~~n~~~~~~a~~~~~ 486 (499)
T TIGR01494 423 KKADVGIAMG------AKAAADIVLLDDNLSTIVDALKEGRKTFSTIKSNIFWAIAYNLILIPLAALLAV 486 (499)
T ss_pred HhCCCccccc------hHHhCCeEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999997 689999999999999999999999999999999999999999999999887653
No 28
>PRK10671 copA copper exporting ATPase; Provisional
Probab=100.00 E-value=2e-78 Score=737.60 Aligned_cols=653 Identities=22% Similarity=0.281 Sum_probs=482.0
Q ss_pred hccchhhhHHHHHhhhhhhhhHhHhhhhhhhhhhcccCCCCccccccccccCCcccChhhhh--hh--hcc---CChhHH
Q 003189 43 ANLSKRFEAEAIRRSNQEKFRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQICPDELG--SI--VEG---HDIKKL 115 (840)
Q Consensus 43 ~~~~~~~e~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~--~~--~~~---~~~~~l 115 (840)
..|....|+.....+++..+++++.+.+..+.. ......+.+.++..||.+.+.+.. .. .++ ++.+.+
T Consensus 111 a~Ca~~Ie~~L~~~~GV~~a~vnl~t~~~~V~~-----~~s~~~I~~~I~~~Gy~a~~~~~~~~~~~~~~~~~~~~~~~~ 185 (834)
T PRK10671 111 ASCVSRVQNALQSVPGVTQARVNLAERTALVMG-----SASPQDLVQAVEKAGYGAEAIEDDAKRRERQQETAQATMKRF 185 (834)
T ss_pred HHHHHHHHHHHhcCCCceeeeeecCCCeEEEEc-----cCCHHHHHHHHHhcCCCccccccccchhhhhhhhhHHHHHHH
Confidence 356666777777777888888888776655541 122234445567788877542210 00 000 111122
Q ss_pred HHhcCHHHHHHHhCCCc-CCC----CCccHHHHHHHHHhc-CCCCCCCCCCccHHHHHHHHHhhhHHHH--HHHHHH-HH
Q 003189 116 KVHGGVEGIAEKLSTSI-TDG----ISTSEHLLNRRKEIY-GINKFTESPARGFWVYVWEALHDMTLMI--LAVCAL-VS 186 (840)
Q Consensus 116 ~~~~gv~~l~~~l~~~~-~~G----l~~~~~~~~~r~~~~-G~N~~~~~~~~~f~~~~~~~l~~~~~~i--l~i~a~-is 186 (840)
....++..+..+..+-+ ..| +.... ...+...+ -.-......+++|++.+|++++.....| |+..++ .+
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~g~~~~~~a~~~l~~~~~~md~l~~l~~~~a 263 (834)
T PRK10671 186 RWQAIVALAVGIPVMVWGMIGDNMMVTADN--RSLWLVIGLITLAVMVFAGGHFYRSAWKSLLNGSATMDTLVALGTGAA 263 (834)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhcccCccc--hhHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhCCCCcHHHHHHHHHHH
Confidence 22222333332100000 001 11110 00111000 0000001247789999999998655432 222222 23
Q ss_pred HHhhh----c----ccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHhHhHh------hhcCceEEEEECCeEEEEe
Q 003189 187 LVVGI----A----TEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDR------EKKKITVQVARNGFRRKIS 252 (840)
Q Consensus 187 ~~~~~----~----~~~~~~~~~d~~~i~~~illv~~v~~~~~~~~~~~~~~l~~------~~~~~~v~V~RdG~~~~I~ 252 (840)
+++++ . ..+..+.|||..+++++++++ ++|.+++...+..+ ...+..++|+|||++++|+
T Consensus 264 ~~~s~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~------g~~le~~~~~~~~~~~~~L~~l~p~~a~~~~~~~~~~v~ 337 (834)
T PRK10671 264 WLYSMSVNLWPQWFPMEARHLYYEASAMIIGLINL------GHMLEARARQRSSKALEKLLDLTPPTARVVTDEGEKSVP 337 (834)
T ss_pred HHHHHHHHHhhcccccccchhhHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHhccCCCEEEEEeCCcEEEEE
Confidence 33322 1 111124588877766554443 56666555443222 2456689999999999999
Q ss_pred ccCCCCCcEEEecCCCcccccEEEEeecceEEecccccCCCCccccCCCCCeEEeccEEeeceEEEEEEEEcccchHHHH
Q 003189 253 IYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKL 332 (840)
Q Consensus 253 ~~dLvvGDIV~l~~Gd~VPaDgvll~g~~l~VDES~LTGES~pv~k~~~~~~l~sGt~v~~G~~~~~V~~vG~~T~~g~i 332 (840)
+++|+|||+|.|++||+|||||+|++|+ ..||||+|||||.|+.|..++. ||+||.|.+|+++++|+++|.+|.+|+|
T Consensus 338 ~~~l~~GD~v~v~~G~~iP~Dg~v~~g~-~~vdeS~lTGEs~pv~k~~gd~-V~aGt~~~~G~~~~~v~~~g~~t~l~~i 415 (834)
T PRK10671 338 LADVQPGMLLRLTTGDRVPVDGEITQGE-AWLDEAMLTGEPIPQQKGEGDS-VHAGTVVQDGSVLFRASAVGSHTTLSRI 415 (834)
T ss_pred HHHcCCCCEEEEcCCCEeeeeEEEEEce-EEEeehhhcCCCCCEecCCCCE-EEecceecceeEEEEEEEEcCcChHHHH
Confidence 9999999999999999999999999996 5999999999999999998875 9999999999999999999999999999
Q ss_pred HHhhcCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhcccCCCccccCCcChHHHHHHHHHHHHHHHHhc
Q 003189 333 MATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAV 412 (840)
Q Consensus 333 ~~~~~~~~~~~tplq~~l~~~a~~~~~~~l~~a~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ai~ilvva~ 412 (840)
.+++++++..++|+|+.+++++.++++++++++++++++|+.. +. ...+...+..++++++++|
T Consensus 416 ~~lv~~a~~~k~~~~~~~d~~a~~~v~~v~~~a~~~~~~~~~~--------~~--------~~~~~~~~~~a~~vlv~ac 479 (834)
T PRK10671 416 IRMVRQAQSSKPEIGQLADKISAVFVPVVVVIALVSAAIWYFF--------GP--------APQIVYTLVIATTVLIIAC 479 (834)
T ss_pred HHHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--------CC--------chHHHHHHHHHHHHHHHhc
Confidence 9999999888999999999999999999999999988887431 00 0124556788999999999
Q ss_pred CCchHHHHHHHHHHHHHHHhccccccccchhhhccCCeeEEEecccCccccCceEEEEEEEcCeeeeecCCCCCCCCCCC
Q 003189 413 PEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSS 492 (840)
Q Consensus 413 P~~Lplav~l~l~~~~~~l~~~~ilvr~~~a~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~ 492 (840)
||+|++++|+++..++.+++++|+|+|+++++|+|+++|++|||||||||+|+|+|.+++..+..
T Consensus 480 PcaL~la~p~a~~~~~~~~a~~gilvk~~~~le~l~~v~~v~fDKTGTLT~g~~~v~~~~~~~~~--------------- 544 (834)
T PRK10671 480 PCALGLATPMSIISGVGRAAEFGVLVRDADALQRASTLDTLVFDKTGTLTEGKPQVVAVKTFNGV--------------- 544 (834)
T ss_pred ccchhhhHHHHHHHHHHHHHHCCeEEecHHHHHhhcCCCEEEEcCCCccccCceEEEEEEccCCC---------------
Confidence 99999999999999999999999999999999999999999999999999999999987653321
Q ss_pred CChhHHHHHHHHHHhcCCceEEecCCCceeEcCChhhHHHHHHHHHcCCChHHHhhccceEEEecCCCCCceEEEEEEeC
Q 003189 493 IPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELP 572 (840)
Q Consensus 493 ~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~g~p~e~All~~~~~~~~~~~~~~~~~~i~~~~pF~s~~k~~~vv~~~~ 572 (840)
++ .+++..+...++. +.||+++|+++++...... ...+|..... .++....+
T Consensus 545 -~~--~~~l~~a~~~e~~-------------s~hp~a~Ai~~~~~~~~~~-----------~~~~~~~~~g-~Gv~~~~~ 596 (834)
T PRK10671 545 -DE--AQALRLAAALEQG-------------SSHPLARAILDKAGDMTLP-----------QVNGFRTLRG-LGVSGEAE 596 (834)
T ss_pred -CH--HHHHHHHHHHhCC-------------CCCHHHHHHHHHHhhCCCC-----------CcccceEecc-eEEEEEEC
Confidence 11 1222222222221 6799999999987533211 1122322221 22222222
Q ss_pred CCcEEEEEcCchHHHHHhcccccccCCceeeCCHHHHHHHHHHHHHHHHcccceeEEEEEEcCCCCCCCCCCCCCceeee
Q 003189 573 EGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCI 652 (840)
Q Consensus 573 ~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~glr~l~~A~~~~~~~~~~~~~~~~~~~~~l 652 (840)
+. .++.|+++.+.... +. ...+.+.++.+..+|.+++.+++ +..++
T Consensus 597 g~---~~~~G~~~~~~~~~------------~~---~~~~~~~~~~~~~~g~~~v~va~----------------~~~~~ 642 (834)
T PRK10671 597 GH---ALLLGNQALLNEQQ------------VD---TKALEAEITAQASQGATPVLLAV----------------DGKAA 642 (834)
T ss_pred CE---EEEEeCHHHHHHcC------------CC---hHHHHHHHHHHHhCCCeEEEEEE----------------CCEEE
Confidence 22 24569988764311 11 12355667778889999998874 45789
Q ss_pred eeecccCCCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEe
Q 003189 653 GIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMAR 732 (840)
Q Consensus 653 g~~~~~D~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar 732 (840)
|++.+.|++||+++++|++|++.|+++.|+|||+..++.++++++||.. ++++
T Consensus 643 g~~~l~d~~r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia~~lgi~~---------------------------~~~~ 695 (834)
T PRK10671 643 ALLAIRDPLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAGIDE---------------------------VIAG 695 (834)
T ss_pred EEEEccCcchhhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCE---------------------------EEeC
Confidence 9999999999999999999999999999999999999999999999964 8999
Q ss_pred cCcccHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEEecCCCcHHHHhhcCEEeccCCchHHHHHHHHHHHHHHH
Q 003189 733 SSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYIN 812 (840)
Q Consensus 733 ~~P~~K~~~V~~l~~~~g~~v~~~GDG~ND~~al~~Advgiamg~~g~~~ak~~aDivlldd~f~~i~~~i~~gR~~~~~ 812 (840)
..|++|.++++.++.+ |+.|+|+|||.||+|||+.||+||+|| +|++.++++||+++++|++..|.+++++||+++.|
T Consensus 696 ~~p~~K~~~i~~l~~~-~~~v~~vGDg~nD~~al~~Agvgia~g-~g~~~a~~~ad~vl~~~~~~~i~~~i~l~r~~~~~ 773 (834)
T PRK10671 696 VLPDGKAEAIKRLQSQ-GRQVAMVGDGINDAPALAQADVGIAMG-GGSDVAIETAAITLMRHSLMGVADALAISRATLRN 773 (834)
T ss_pred CCHHHHHHHHHHHhhc-CCEEEEEeCCHHHHHHHHhCCeeEEec-CCCHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHH
Confidence 9999999999999988 999999999999999999999999999 89999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q 003189 813 IQKFVQFQLTVNVVALIVNF 832 (840)
Q Consensus 813 i~k~i~f~l~~N~~~l~~~~ 832 (840)
|++|+.|++.||++++++++
T Consensus 774 i~~Nl~~a~~yn~~~i~~a~ 793 (834)
T PRK10671 774 MKQNLLGAFIYNSLGIPIAA 793 (834)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999986
No 29
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=100.00 E-value=1.3e-77 Score=695.78 Aligned_cols=503 Identities=27% Similarity=0.347 Sum_probs=417.9
Q ss_pred HHHHHHHHHHhhhcccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHhHhHhhhcCceEEEEECCeEEEEeccCCCC
Q 003189 179 LAVCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNGFRRKISIYDLLP 258 (840)
Q Consensus 179 l~i~a~is~~~~~~~~~~~~~~~d~~~i~~~illv~~v~~~~~~~~~~~~~~l~~~~~~~~v~V~RdG~~~~I~~~dLvv 258 (840)
+.++++++++++ .|+|+..+++.+++..++....+++.++..++|.+ ..+.+++|+|||++++|++++|+|
T Consensus 5 ~~~a~~~~~~~~--------~~~~~~~i~~~~~~~~~l~~~~~~~a~~~l~~l~~-~~~~~~~v~r~g~~~~i~~~~l~~ 75 (536)
T TIGR01512 5 MALAALGAVAIG--------EYLEGALLLLLFSIGETLEEYASGRARRALKALME-LAPDTARVLRGGSLEEVAVEELKV 75 (536)
T ss_pred HHHHHHHHHHHh--------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCCCEEEEEECCEEEEEEHHHCCC
Confidence 445555666554 48999777766666666666666666666666655 456689999999999999999999
Q ss_pred CcEEEecCCCcccccEEEEeecceEEecccccCCCCccccCCCCCeEEeccEEeeceEEEEEEEEcccchHHHHHHhhcC
Q 003189 259 GDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSE 338 (840)
Q Consensus 259 GDIV~l~~Gd~VPaDgvll~g~~l~VDES~LTGES~pv~k~~~~~~l~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~ 338 (840)
||+|.+++||+|||||++++|+ +.||||+|||||.|+.|.+++ .+|+||.+.+|+++++|+++|.+|.+|++.+++.+
T Consensus 76 GDiv~v~~G~~iP~Dg~ii~g~-~~vdes~lTGEs~pv~k~~g~-~v~aGt~v~~G~~~~~V~~~g~~t~~~~i~~~~~~ 153 (536)
T TIGR01512 76 GDVVVVKPGERVPVDGVVLSGT-STVDESALTGESVPVEKAPGD-EVFAGAINLDGVLTIVVTKLPADSTIAKIVNLVEE 153 (536)
T ss_pred CCEEEEcCCCEeecceEEEeCc-EEEEecccCCCCCcEEeCCCC-EEEeeeEECCceEEEEEEEeccccHHHHHHHHHHH
Confidence 9999999999999999999997 499999999999999999876 59999999999999999999999999999999998
Q ss_pred CCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhcccCCCccccCCcChHHHHHHHHHHHHHHHHhcCCchHH
Q 003189 339 GGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPL 418 (840)
Q Consensus 339 ~~~~~tplq~~l~~~a~~~~~~~l~~a~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ai~ilvva~P~~Lpl 418 (840)
...+++|+|+.+++++.+++++.+.++++++++|... . . +...+..++++++++|||+||+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~------------~----~~~~~~~~~svlv~~~P~aL~l 214 (536)
T TIGR01512 154 AQSRKAKTQRFIDRFARYYTPVVLAIALAIWLVPGLL---K------------R----WPFWVYRALVLLVVASPCALVI 214 (536)
T ss_pred HhhCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---c------------c----cHHHHHHHHHHHhhcCcccccc
Confidence 8888999999999999999999998888877765321 0 0 1126778899999999999999
Q ss_pred HHHHHHHHHHHHHhccccccccchhhhccCCeeEEEecccCccccCceEEEEEEEcCeeeeecCCCCCCCCCCCCChhHH
Q 003189 419 AVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASAS 498 (840)
Q Consensus 419 av~l~l~~~~~~l~~~~ilvr~~~a~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 498 (840)
++|+++..++++|.++|+++|+++++|++|++|++|||||||||+|+|+|.+++.. +.+
T Consensus 215 a~~~~~~~~~~~~~k~gilik~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~~---------------------~~l 273 (536)
T TIGR01512 215 SAPAAYLSAISAAARHGILIKGGAALEALAKIKTVAFDKTGTLTTGRPKVVDVVPA---------------------EVL 273 (536)
T ss_pred chHHHHHHHHHHHHHCCeEEcCcHHHHhhcCCCEEEECCCCCCcCCceEEEEeeHH---------------------HHH
Confidence 99999999999999999999999999999999999999999999999999886421 122
Q ss_pred HHHHHHHHhcCCceEEecCCCceeEcCChhhHHHHHHHHHcCCChHHHhhccceEEEecCCCCCce--EEEEEEeCCCcE
Q 003189 499 KLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQ--MGVVIELPEGGF 576 (840)
Q Consensus 499 ~~l~~~i~~~~~~~~~~~~~~~~~~~g~p~e~All~~~~~~~~~~~~~~~~~~i~~~~pF~s~~k~--~~vv~~~~~~~~ 576 (840)
.. +... + ..+.||+++|+++++.+.+ ||++.+.. .++.....+..+
T Consensus 274 ~~---a~~~------e-------~~~~hp~~~Ai~~~~~~~~----------------~~~~~~~~~g~gi~~~~~g~~~ 321 (536)
T TIGR01512 274 RL---AAAA------E-------QASSHPLARAIVDYARKRE----------------NVESVEEVPGEGVRAVVDGGEV 321 (536)
T ss_pred HH---HHHH------h-------ccCCCcHHHHHHHHHHhcC----------------CCcceEEecCCeEEEEECCeEE
Confidence 22 1111 1 1267999999999987553 12222111 122222222222
Q ss_pred EEEEcCchHHHHHhcccccccCCceeeCCHHHHHHHHHHHHHHHHcccceeEEEEEEcCCCCCCCCCCCCCceeeeeeec
Q 003189 577 RVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVG 656 (840)
Q Consensus 577 ~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~glr~l~~A~~~~~~~~~~~~~~~~~~~~~lg~~~ 656 (840)
..|+++.+.+. + . ..+..+|.+++.++ .|..++|.+.
T Consensus 322 ---~ig~~~~~~~~--------~----~------------~~~~~~~~~~~~v~----------------~~~~~~g~i~ 358 (536)
T TIGR01512 322 ---RIGNPRSLEAA--------V----G------------ARPESAGKTIVHVA----------------RDGTYLGYIL 358 (536)
T ss_pred ---EEcCHHHHhhc--------C----C------------cchhhCCCeEEEEE----------------ECCEEEEEEE
Confidence 23766543221 1 0 03455676766554 4678999999
Q ss_pred ccCCCCcchHHHHHHHHhCCC-EEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCc
Q 003189 657 IKDPMRPGVKESVAICRSAGI-TVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSP 735 (840)
Q Consensus 657 ~~D~lR~~~~~aI~~l~~aGi-~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P 735 (840)
++|++||+++++|++|+++|+ ++.|+|||+..++.++++++||.. +|++..|
T Consensus 359 ~~d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~lgi~~---------------------------~f~~~~p 411 (536)
T TIGR01512 359 LSDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELGIDE---------------------------VHAELLP 411 (536)
T ss_pred EeccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHHcCChh---------------------------hhhccCc
Confidence 999999999999999999999 999999999999999999999964 8889999
Q ss_pred ccHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEEecCCCcHHHHhhcCEEeccCCchHHHHHHHHHHHHHHHHHH
Q 003189 736 MDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQK 815 (840)
Q Consensus 736 ~~K~~~V~~l~~~~g~~v~~~GDG~ND~~al~~Advgiamg~~g~~~ak~~aDivlldd~f~~i~~~i~~gR~~~~~i~k 815 (840)
++|..+++.++.. ++.|+|+|||.||+||++.||+|++||.++++.+++.||+++++|++..+.+++++||+++.||++
T Consensus 412 ~~K~~~i~~l~~~-~~~v~~vGDg~nD~~al~~A~vgia~g~~~~~~~~~~ad~vl~~~~l~~l~~~i~~~r~~~~~i~~ 490 (536)
T TIGR01512 412 EDKLEIVKELREK-YGPVAMVGDGINDAPALAAADVGIAMGASGSDVAIETADVVLLNDDLSRLPQAIRLARRTRRIVKQ 490 (536)
T ss_pred HHHHHHHHHHHhc-CCEEEEEeCCHHHHHHHHhCCEEEEeCCCccHHHHHhCCEEEECCCHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999998 999999999999999999999999999668999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHh
Q 003189 816 FVQFQLTVNVVALIVNFSSA 835 (840)
Q Consensus 816 ~i~f~l~~N~~~l~~~~~~~ 835 (840)
|+.|++.||++++++++++.
T Consensus 491 nl~~a~~~n~~~i~~a~~G~ 510 (536)
T TIGR01512 491 NVVIALGIILLLILLALFGV 510 (536)
T ss_pred HHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999998763
No 30
>KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=7.2e-69 Score=592.04 Aligned_cols=581 Identities=25% Similarity=0.338 Sum_probs=442.5
Q ss_pred CCCCccHHHHHHHHHhcCCCCCCCCCCccHHHHHHHHHhhhHHHHHHHHHHHHHHhhhcccCCCCCcchhHHHHHHHHHH
Q 003189 134 DGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCALVSLVVGIATEGWPKGAHDGLGIVMSILLV 213 (840)
Q Consensus 134 ~Gl~~~~~~~~~r~~~~G~N~~~~~~~~~f~~~~~~~l~~~~~~il~i~a~is~~~~~~~~~~~~~~~d~~~i~~~illv 213 (840)
.|.. ++.++..-...||.|.+..+ .++|-.++.+.-..|++.+..+|..+++.- +.||-++.. ++++
T Consensus 161 ~G~~-~~~~i~~a~~~~G~N~fdi~-vPtF~eLFkE~A~aPfFVFQVFcvgLWCLD--------eyWYySlFt---LfMl 227 (1160)
T KOG0209|consen 161 TGHE-EESEIKLAKHKYGKNKFDIV-VPTFSELFKEHAVAPFFVFQVFCVGLWCLD--------EYWYYSLFT---LFML 227 (1160)
T ss_pred cCcc-hHHHHHHHHHHhcCCccccC-CccHHHHHHHhccCceeeHhHHhHHHHHhH--------HHHHHHHHH---HHHH
Confidence 5776 44456666667999999654 567999999999999888887777766542 257766543 3445
Q ss_pred HHHHHHHHHHHHHHHhHhHhh-hcCceEEEEECCeEEEEeccCCCCCcEEEecCC---CcccccEEEEeecceEEecccc
Q 003189 214 VFVTATSDYKQSLQFKDLDRE-KKKITVQVARNGFRRKISIYDLLPGDIVHLCMG---DQVPADGLFVSGFSVLINESSL 289 (840)
Q Consensus 214 ~~v~~~~~~~~~~~~~~l~~~-~~~~~v~V~RdG~~~~I~~~dLvvGDIV~l~~G---d~VPaDgvll~g~~l~VDES~L 289 (840)
+.+.+..-+++.+....+.+. .++..+.|+|+++|+.+..+||+|||+|.+..| ..||||.+++.|+ |.|||++|
T Consensus 228 i~fE~tlV~Qrm~~lse~R~Mg~kpy~I~v~R~kKW~~l~seeLlPgDvVSI~r~~ed~~vPCDllLL~Gs-ciVnEaML 306 (1160)
T KOG0209|consen 228 IAFEATLVKQRMRTLSEFRTMGNKPYTINVYRNKKWVKLMSEELLPGDVVSIGRGAEDSHVPCDLLLLRGS-CIVNEAML 306 (1160)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCceEEEEEecCcceeccccccCCCceEEeccCcccCcCCceEEEEecc-eeechhhh
Confidence 555666666666666666653 356689999999999999999999999999874 5799999999995 89999999
Q ss_pred cCCCCccccC----------------CCCCeEEeccEEe-------------eceEEEEEEEEcccchHHHHHHhhcCCC
Q 003189 290 TGESEPVNVN----------------ALNPFLLSGTKVQ-------------NGSCKMLVTTVGMRTQWGKLMATLSEGG 340 (840)
Q Consensus 290 TGES~pv~k~----------------~~~~~l~sGt~v~-------------~G~~~~~V~~vG~~T~~g~i~~~~~~~~ 340 (840)
||||.|..|. .+..++|.||+++ +|.+.+.|++||.+|..|++++.+....
T Consensus 307 tGESvPl~KE~Ie~~~~d~~ld~~~d~k~hVlfGGTkivQht~p~~~slk~pDggc~a~VlrTGFeTSQGkLvRtilf~a 386 (1160)
T KOG0209|consen 307 TGESVPLMKESIELRDSDDILDIDRDDKLHVLFGGTKIVQHTPPKKASLKTPDGGCVAYVLRTGFETSQGKLVRTILFSA 386 (1160)
T ss_pred cCCCccccccccccCChhhhcccccccceEEEEcCceEEEecCCccccccCCCCCeEEEEEeccccccCCceeeeEEecc
Confidence 9999999884 1345799999997 6889999999999999999999988766
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhccc-CCCccccCCcChHHHHHHHHHHHHHHHHhcCCchHHH
Q 003189 341 DDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQ-EGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLA 419 (840)
Q Consensus 341 ~~~tplq~~l~~~a~~~~~~~l~~a~~~~~v~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ai~ilvva~P~~Lpla 419 (840)
++-|.-.. =+.+| ++.+++|.+....|.+.... ++. .+=.+.|.-++-|+...+|.-||+-
T Consensus 387 ervTaNn~----Etf~F-----ILFLlVFAiaAa~Yvwv~Gskd~~---------RsrYKL~LeC~LIlTSVvPpELPmE 448 (1160)
T KOG0209|consen 387 ERVTANNR----ETFIF-----ILFLLVFAIAAAGYVWVEGSKDPT---------RSRYKLFLECTLILTSVVPPELPME 448 (1160)
T ss_pred eeeeeccH----HHHHH-----HHHHHHHHHHhhheEEEecccCcc---------hhhhheeeeeeEEEeccCCCCCchh
Confidence 55443221 12222 23334444444444332211 110 1112334556667777899999999
Q ss_pred HHHHHHHHHHHHhccccccccchhhhccCCeeEEEecccCccccCceEEEEEEEcCeeeeecCCCCCCCCCCCCChhHHH
Q 003189 420 VTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASK 499 (840)
Q Consensus 420 v~l~l~~~~~~l~~~~ilvr~~~a~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 499 (840)
++++.-.+...|.|.+++|..+-.+.-.|++|..|||||||||+..|.|..+.-.... .+.....+..+.+...
T Consensus 449 LSmAVNsSL~ALak~~vyCTEPFRIPfAGkvdvCCFDKTGTLT~d~lvv~Gvag~~~~------~~~~~~~s~~p~~t~~ 522 (1160)
T KOG0209|consen 449 LSMAVNSSLIALAKLGVYCTEPFRIPFAGKVDVCCFDKTGTLTEDDLVVEGVAGLSAD------EGALTPASKAPNETVL 522 (1160)
T ss_pred hhHHHHHHHHHHHHhceeecCccccccCCceeEEEecCCCccccccEEEEecccccCC------cccccchhhCCchHHH
Confidence 9999999999999999999999999999999999999999999999999887542211 1111122333444443
Q ss_pred HHHHHHHhcCCceEEecCCCceeEcCChhhHHHHHHHHHc--CCC----hHHHhhccceEEEecCCCCCceEEEEEEeCC
Q 003189 500 LLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLL--GGD----FQAERQASKIVKVEPFNSVKKQMGVVIELPE 573 (840)
Q Consensus 500 ~l~~~i~~~~~~~~~~~~~~~~~~~g~p~e~All~~~~~~--~~~----~~~~~~~~~i~~~~pF~s~~k~~~vv~~~~~ 573 (840)
.+ +.||+-.. .+ + ...|+|.|+|.+++.... ..+ .+..-+..+|.+.+.|+|.-|||+++....+
T Consensus 523 vl----AscHsLv~-le-~---~lVGDPlEKA~l~~v~W~~~k~~~v~p~~~~~~~lkI~~ryhFsSaLKRmsvva~~~~ 593 (1160)
T KOG0209|consen 523 VL----ASCHSLVL-LE-D---KLVGDPLEKATLEAVGWNLEKKNSVCPREGNGKKLKIIQRYHFSSALKRMSVVASHQG 593 (1160)
T ss_pred HH----HHHHHHHH-hc-C---cccCChHHHHHHHhcCcccccCcccCCCcCCCcccchhhhhhHHHHHHHHHhhhhccc
Confidence 33 33332211 11 1 268999999999875211 001 1111125778999999999999999987543
Q ss_pred ----CcEEEEEcCchHHHHHhcccccccCCceeeCCHHHHHHHHHHHHHHHHcccceeEEEEEEcCCCC-----CCCCCC
Q 003189 574 ----GGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEF-----SADAPI 644 (840)
Q Consensus 574 ----~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~glr~l~~A~~~~~~~~-----~~~~~~ 644 (840)
.++.+.+|||||.|-.+-. +....+++...+|+++|.||+|++||++..-. ..+++.
T Consensus 594 ~g~s~k~~~aVKGAPEvi~~ml~--------------dvP~dY~~iYk~ytR~GsRVLALg~K~l~~~~~~q~rd~~Re~ 659 (1160)
T KOG0209|consen 594 PGSSEKYFVAVKGAPEVIQEMLR--------------DVPKDYDEIYKRYTRQGSRVLALGYKPLGDMMVSQVRDLKRED 659 (1160)
T ss_pred CCCceEEEEEecCCHHHHHHHHH--------------hCchhHHHHHHHHhhccceEEEEecccccccchhhhhhhhhhh
Confidence 3578889999999977643 23456788899999999999999999997431 234567
Q ss_pred CCCceeeeeeecccCCCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCC---------------------
Q 003189 645 PTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDN--------------------- 703 (840)
Q Consensus 645 ~~~~~~~lg~~~~~D~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~--------------------- 703 (840)
.|++++|.|++.|.-|+|||++++|+.|++.+++++|+||||+.||.++|+++||....
T Consensus 660 vEsdLtFaGFlif~CPlK~Ds~~~I~el~~SSH~vvMITGDnpLTAchVak~v~iv~k~~~vl~~~~~~~~~~~~w~s~d 739 (1160)
T KOG0209|consen 660 VESDLTFAGFLIFSCPLKPDSKKTIKELNNSSHRVVMITGDNPLTACHVAKEVGIVEKPTLVLDLPEEGDGNQLEWVSVD 739 (1160)
T ss_pred hhhcceeeeeEEEeCCCCccHHHHHHHHhccCceEEEEeCCCccchheehheeeeeccCceeeccCccCCCceeeEecCC
Confidence 89999999999999999999999999999999999999999999999999999997531
Q ss_pred --------------------CccccChhhhcCC-HHHHhhhcCCceEEEecCcccHHHHHHHHHHhCCCEEEEEcCCccC
Q 003189 704 --------------------GIAIEGPEFREKS-DEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTND 762 (840)
Q Consensus 704 --------------------~~~~~g~~~~~~~-~~~~~~~~~~~~v~ar~~P~~K~~~V~~l~~~~g~~v~~~GDG~ND 762 (840)
+++++|..+..+. .+.+.++++++.||||+.|.||..++..|++. |+.++|+|||+||
T Consensus 740 ~t~~lp~~p~~~~~~l~~~~dlcitG~~l~~l~~~~~l~~l~~hv~VfARvaP~QKE~ii~tlK~~-Gy~TLMCGDGTND 818 (1160)
T KOG0209|consen 740 GTIVLPLKPGKKKTLLAETHDLCITGSALDHLQATDQLRRLIPHVWVFARVAPKQKEFIITTLKKL-GYVTLMCGDGTND 818 (1160)
T ss_pred CceeecCCCCccchhhhhhhhhhcchhHHHHHhhhHHHHHhhhheeEEEeeChhhHHHHHHHHHhc-CeEEEEecCCCcc
Confidence 1456677766543 34678889999999999999999999999998 9999999999999
Q ss_pred HHHhhhCCccEEec
Q 003189 763 APALHEADIGLAMG 776 (840)
Q Consensus 763 ~~al~~Advgiamg 776 (840)
..|||+||||||+=
T Consensus 819 VGALK~AhVGVALL 832 (1160)
T KOG0209|consen 819 VGALKQAHVGVALL 832 (1160)
T ss_pred hhhhhhcccceehh
Confidence 99999999999985
No 31
>KOG0206 consensus P-type ATPase [General function prediction only]
Probab=100.00 E-value=2.8e-68 Score=631.14 Aligned_cols=667 Identities=25% Similarity=0.346 Sum_probs=519.4
Q ss_pred HHHhcCCCCCCCCCCc--cHH-HHHHHHHhhhHHHHHHHHHHHHHHhhhcccCCCCCcchhHHHHHHHHHHHHHHHHHHH
Q 003189 146 RKEIYGINKFTESPAR--GFW-VYVWEALHDMTLMILAVCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDY 222 (840)
Q Consensus 146 r~~~~G~N~~~~~~~~--~f~-~~~~~~l~~~~~~il~i~a~is~~~~~~~~~~~~~~~d~~~i~~~illv~~v~~~~~~ 222 (840)
+...|-.|.+...+.. +|+ +.+|+||+...++++++.++++++. +.+ .++| ..++++++++.++++++.
T Consensus 28 ~~~~~~~N~i~TtKYt~~tFlPk~l~eQf~r~aN~yFl~~~il~~ip-~~~----~~~~---~~~~pl~~vl~~t~iKd~ 99 (1151)
T KOG0206|consen 28 PQRKYCDNRISTTKYTLFTFLPKNLFEQFHRVANLYFLFIAILQFIP-LSP----FNPY---TTLVPLLFVLGITAIKDA 99 (1151)
T ss_pred hhccccCCeeEEEeccchhhhHHHHHHHHHHHHHHHHHHHHHHHcCc-ccc----cCcc---ceeeceeeeehHHHHHHH
Confidence 3457888988765433 333 7899999999999999999999887 432 1223 346688889999999999
Q ss_pred HHHHHHhHhHhhhcCceEEEEECCe-EEEEeccCCCCCcEEEecCCCcccccEEEEeecc----eEEecccccCCCCccc
Q 003189 223 KQSLQFKDLDREKKKITVQVARNGF-RRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFS----VLINESSLTGESEPVN 297 (840)
Q Consensus 223 ~~~~~~~~l~~~~~~~~v~V~RdG~-~~~I~~~dLvvGDIV~l~~Gd~VPaDgvll~g~~----l~VDES~LTGES~pv~ 297 (840)
.++..+++.+++.++.++.|.|++. ..+..|.+|+|||+|.+..++.+|||.++++++. |+|+.+.|+||+....
T Consensus 100 ~eD~rR~~~D~~iN~~~~~v~~~~~~~~~~~wk~~~vGd~v~v~~~~~~paD~llLsss~~~~~cyveT~nLDGEtnLK~ 179 (1151)
T KOG0206|consen 100 IEDYRRHKQDKEVNNRKVEVLRGDGCFVEKKWKDVRVGDIVRVEKDEFVPADLLLLSSSDEDGICYVETANLDGETNLKV 179 (1151)
T ss_pred HhhhhhhhccHHhhcceeEEecCCceeeeeccceeeeeeEEEeccCCccccceEEecCCCCCceeEEEEeecCCccccce
Confidence 9999999999999999999999644 8999999999999999999999999999999864 9999999999998776
Q ss_pred cC----------------------------------------------CCCCeEEeccEEeec-eEEEEEEEEcccchHH
Q 003189 298 VN----------------------------------------------ALNPFLLSGTKVQNG-SCKMLVTTVGMRTQWG 330 (840)
Q Consensus 298 k~----------------------------------------------~~~~~l~sGt~v~~G-~~~~~V~~vG~~T~~g 330 (840)
|. ..++.++.|+++.+. .+.+.|+.+|.+|
T Consensus 180 k~~l~~~~~~~~~~~~~~~~~~i~cE~p~~~ly~f~g~l~~~~~~~pl~~~~~Llrg~~lrNT~~v~G~vv~tG~dt--- 256 (1151)
T KOG0206|consen 180 KQALECTSKLDSEDSLKNFKGWIECEDPNANLYTFVGNLELQGQIYPLSPDNLLLRGSRLRNTEWVYGVVVFTGHDT--- 256 (1151)
T ss_pred eeehhhhhcccccccccccCCceEEcCCcccHhhhhhheeeccCCCCCcHHHcccCCceeccCcEEEEEEEEcCCcc---
Confidence 51 012357888888874 4789999999999
Q ss_pred HHHHhhcCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhcccCCC-cccc-CCc-ChHHHHHHHHHHHHH
Q 003189 331 KLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGT-HWTW-SGD-DALEILEFFAIAVTI 407 (840)
Q Consensus 331 ~i~~~~~~~~~~~tplq~~l~~~a~~~~~~~l~~a~~~~~v~~~~~~~~~~~~~~-~~~~-~~~-~~~~~~~~~~~ai~i 407 (840)
+++..-..+..+++++++.+|.....+..+.++++++..+... .......... .+++ ... ........|+.++.+
T Consensus 257 K~~~n~~~~~~Krs~ier~~n~~i~~~~~~l~~~~~~~~i~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~t~~il 334 (1151)
T KOG0206|consen 257 KLMQNSGKPPSKRSRIERKMNKIIILLFVLLILMCLISAIGFA--IWTRQDGRHNGEWWYLSPSEAAYAGFVHFLTFIIL 334 (1151)
T ss_pred hHHHhcCCCccccchhhhhhhhhHHHHHHHHHHHHHHHHhhhh--eeeeecccccCchhhhcCchHHHHHHHHHHHHHhh
Confidence 5666666677788999999987766665555544444333211 1111111111 1111 222 112334556677778
Q ss_pred HHHhcCCchHHHHHHHHHHHHHHHh----------ccccccccchhhhccCCeeEEEecccCccccCceEEEEEEEcCee
Q 003189 408 VVVAVPEGLPLAVTLSLAFAMKKMM----------NDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEI 477 (840)
Q Consensus 408 lvva~P~~Lplav~l~l~~~~~~l~----------~~~ilvr~~~a~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~ 477 (840)
+...+|..|...+.+.-.+.+.-+. ...+.+|..+.-|.||++++|.+|||||||+|.|.+.++.+.+..
T Consensus 335 ~~~liPISLyvsiEiik~~qs~fi~~D~~my~~e~d~~~~~rtsnl~eeLGqv~yIfSDKTGTLT~N~M~F~kCsi~g~~ 414 (1151)
T KOG0206|consen 335 YQYLIPISLYVSIEIVKVLQSIFINNDLDMYDEETDTPAQARTSNLNEELGQVEYIFSDKTGTLTQNSMEFKKCSINGTS 414 (1151)
T ss_pred hhceEEEEEEEEeeehHHHHHHHcchHHHhhhccCCCccccccCCchhhhcceeEEEEcCcCccccceeeeecccccCcc
Confidence 8889999999888877766653332 236789999999999999999999999999999999999998776
Q ss_pred eeecCCCC-------C---------------CC------CCCCCChhHHHHHHHHHHhcCCceEEecCC--CceeEcCCh
Q 003189 478 KEVDNSKG-------T---------------PA------FGSSIPASASKLLLQSIFNNTGGEVVIGEG--NKTEILGTP 527 (840)
Q Consensus 478 ~~~~~~~~-------~---------------~~------~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~--~~~~~~g~p 527 (840)
|....... . +. ..+.........+..++++|++...+.+.+ ...+...+|
T Consensus 415 yg~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~f~~~la~chtv~~e~~~~~~~~~Y~A~SP 494 (1151)
T KOG0206|consen 415 YGRNVTEVEAALAKRSGGDVNEHKIKGFTFEDSRLVDGLWSSEPQAEDILEFFRALALCHTVIPEKDEDSGKLSYEAESP 494 (1151)
T ss_pred cccCCChhhcccCccccccccccccccceeccchhhccccccccCcchHHHHhhHHhccceeeeccCCCccceeeecCCC
Confidence 54221110 0 00 001112233445667888888877766333 245668899
Q ss_pred hhHHHHHHHHHcCCChHH------------HhhccceEEEecCCCCCceEEEEEEeCCCcEEEEEcCchHHHHHhccccc
Q 003189 528 TETAILEFGLLLGGDFQA------------ERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFL 595 (840)
Q Consensus 528 ~e~All~~~~~~~~~~~~------------~~~~~~i~~~~pF~s~~k~~~vv~~~~~~~~~~~~KGa~e~il~~c~~~~ 595 (840)
.|.|+++.|+..|..+.. ....+++++..+|+|.||||||+++.|++.+.++||||+..|.+++..
T Consensus 495 DE~AlV~aAr~~gf~f~~Rt~~~vti~~~g~~~~y~lL~iLeF~S~RKRMSVIVR~p~g~i~LycKGADsvI~erL~~-- 572 (1151)
T KOG0206|consen 495 DEAALVEAARELGFVFLGRTPDSVTIRELGVEETYELLNVLEFNSTRKRMSVIVRDPDGRILLYCKGADSVIFERLSK-- 572 (1151)
T ss_pred cHHHHHHHHHhcCceeeeccCceEEEeccccceeEEEEEEeccccccceeEEEEEcCCCcEEEEEcCcchhhHhhhhh--
Confidence 999999999999876532 234789999999999999999999999999999999999999999874
Q ss_pred ccCCceeeCCHHHHHHHHHHHHHHHHcccceeEEEEEEcCCCC-------------C-CC--------CCCCCCceeeee
Q 003189 596 NSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEF-------------S-AD--------APIPTEGYTCIG 653 (840)
Q Consensus 596 ~~~g~~~~l~~~~~~~~~~~~~~~~~~glr~l~~A~~~~~~~~-------------~-~~--------~~~~~~~~~~lg 653 (840)
-....++.-.+.+++||.+|+||+|+|||+++++. + .+ .+..|+||+++|
T Consensus 573 --------~~~~~~e~T~~Hl~~yA~eGLRTLc~A~r~l~e~eY~~w~~~~~~A~ts~~~Re~~L~e~ae~iEk~L~LLG 644 (1151)
T KOG0206|consen 573 --------NGEKLREKTQEHLEEYATEGLRTLCLAYRELDEEEYEEWNERYNEAKTSLTDREELLDEVAEEIEKDLILLG 644 (1151)
T ss_pred --------cchHHHHHHHHHHHHHHhhhhhHhhhhhhccCHHHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHhcchhhc
Confidence 22455667778999999999999999999998761 0 01 135689999999
Q ss_pred eecccCCCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCC-----------------------------
Q 003189 654 IVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNG----------------------------- 704 (840)
Q Consensus 654 ~~~~~D~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~----------------------------- 704 (840)
..+++|++++|++++|+.|++||||+||+|||..+||..|+..|++..++.
T Consensus 645 ATAIEDkLQdgVPetI~~L~~AGIKIWVLTGDK~ETAiNIg~sC~Ll~~~m~~i~i~~~~~~~~~~~~~~~~~~~~l~~~ 724 (1151)
T KOG0206|consen 645 ATAIEDKLQDGVPETIAKLAQAGIKIWVLTGDKQETAINIGYSCRLLRQDMKLIIINTETSEELSSLDATAALKETLLRK 724 (1151)
T ss_pred ceeeechhccCchHHHHHHHHcCCEEEEEcCcHHHHHHHHHHhhcCCCCCceEEEEecCChhhhcchhhHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999986532
Q ss_pred ------------------ccccChhhhcCCHHH----Hhhhc--CCceEEEecCcccHHHHHHHHHHhCCCEEEEEcCCc
Q 003189 705 ------------------IAIEGPEFREKSDEE----LSKLI--PKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGT 760 (840)
Q Consensus 705 ------------------~~~~g~~~~~~~~~~----~~~~~--~~~~v~ar~~P~~K~~~V~~l~~~~g~~v~~~GDG~ 760 (840)
++++|+.+....+.+ +.+.. ++..++||++|.||+.+|+..++..+.+++.+|||.
T Consensus 725 ~~~~~~~~~~~~~~~~~aLVIDGktl~~aL~~~~~~~Fl~la~~C~sViCCR~sPlQKA~Vv~lVk~~~~~~TLAIGDGA 804 (1151)
T KOG0206|consen 725 FTEELEEAKLEHSEKPFALVIDGKTLAYALEDELRKKFLELAKRCKSVICCRVSPLQKALVVKLVKKGLKAVTLAIGDGA 804 (1151)
T ss_pred hhHHHHHHhhccCcCCceEEEECHHHHhhhCchhhHHHHHHHHhcCEEEEccCCHHHHHHHHHHHHhcCCceEEEeeCCC
Confidence 334444443322221 12222 566799999999999999999876689999999999
Q ss_pred cCHHHhhhCCccEEecCCCcH--HHHhhcCEEeccCCchHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 003189 761 NDAPALHEADIGLAMGIAGTE--VAKESADVIILDDNFSTIVTV-AKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACL 837 (840)
Q Consensus 761 ND~~al~~Advgiamg~~g~~--~ak~~aDivlldd~f~~i~~~-i~~gR~~~~~i~k~i~f~l~~N~~~l~~~~~~~~~ 837 (840)
||.+|+++||||| ||+|.| .|..+||+-+.. |.-+-++ +.+||+.|.++.+++.|.++.|+...++.|.+.++
T Consensus 805 NDVsMIQ~AhVGV--GIsG~EGmQAvmsSD~AIaq--FrfL~rLLLVHGhW~Y~R~a~~ilyfFYKNi~f~~~~fwy~f~ 880 (1151)
T KOG0206|consen 805 NDVSMIQEAHVGV--GISGQEGMQAVMSSDFAIAQ--FRFLERLLLVHGHWSYIRLAKMILYFFYKNIAFTFTLFWYQFF 880 (1151)
T ss_pred ccchheeeCCcCe--eeccchhhhhhhcccchHHH--HHHHhhhheeecceeHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Confidence 9999999999999 455555 478889999987 8888777 78999999999999999999999999999999999
Q ss_pred cC
Q 003189 838 TG 839 (840)
Q Consensus 838 ~g 839 (840)
+|
T Consensus 881 ~g 882 (1151)
T KOG0206|consen 881 NG 882 (1151)
T ss_pred CC
Confidence 87
No 32
>KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1e-66 Score=565.09 Aligned_cols=640 Identities=23% Similarity=0.337 Sum_probs=480.3
Q ss_pred HHHhcCCCCCCCCCC--ccHH-HHHHHHHhhhHHHHHHHHHHHHHHhhhcccCCCCCcchhHHHHHHHHHHHHHHHHHHH
Q 003189 146 RKEIYGINKFTESPA--RGFW-VYVWEALHDMTLMILAVCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDY 222 (840)
Q Consensus 146 r~~~~G~N~~~~~~~--~~f~-~~~~~~l~~~~~~il~i~a~is~~~~~~~~~~~~~~~d~~~i~~~illv~~v~~~~~~ 222 (840)
++.+|-+|.+...+. .+|+ ..++++|+...+.++++.++..++..+.. |....| ..++.++.+++.+.+-
T Consensus 75 ~~~r~~pn~v~nqKyn~~tF~p~vl~~qF~~F~nlyfll~alsQ~ip~~~i-g~l~ty------~~pl~fvl~itl~kea 147 (1051)
T KOG0210|consen 75 RRRRFPPNEVRNQKYNIFTFVPAVLFEQFKFFLNLYFLLVALSQLIPALKI-GYLSTY------WGPLGFVLTITLIKEA 147 (1051)
T ss_pred ccccCCCchhhhcccceEEeeHHHHHHHHHHHHHHHHHHHHHHhhCchhee-cchhhh------hHHHHHHHHHHHHHHH
Confidence 446788888876543 3343 56778888888888888888777665532 222122 2344455556666776
Q ss_pred HHHHHHhHhHhhhcCceEEEE-ECCeEEEEeccCCCCCcEEEecCCCcccccEEEEeec----ceEEecccccCCCCccc
Q 003189 223 KQSLQFKDLDREKKKITVQVA-RNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGF----SVLINESSLTGESEPVN 297 (840)
Q Consensus 223 ~~~~~~~~l~~~~~~~~v~V~-RdG~~~~I~~~dLvvGDIV~l~~Gd~VPaDgvll~g~----~l~VDES~LTGES~pv~ 297 (840)
.++.+++.-+++.++..-+++ |+|...+ ++++|.+||+|.+..+++||||.+++..+ +|.|-+-.|+||++...
T Consensus 148 vdd~~r~~rd~~~Nse~y~~ltr~~~~~~-~Ss~i~vGDvi~v~K~~RVPADmilLrTsd~sg~~FiRTDQLDGETDWKL 226 (1051)
T KOG0210|consen 148 VDDLKRRRRDRELNSEKYTKLTRDGTRRE-PSSDIKVGDVIIVHKDERVPADMILLRTSDKSGSCFIRTDQLDGETDWKL 226 (1051)
T ss_pred HHHHHHHHhhhhhhhhhheeeccCCcccc-cccccccccEEEEecCCcCCcceEEEEccCCCCceEEeccccCCccccee
Confidence 676666666666665555665 7887665 99999999999999999999999999864 38999999999998654
Q ss_pred cC----------------------------------------------CCCCeEEeccEEeeceEEEEEEEEcccchHHH
Q 003189 298 VN----------------------------------------------ALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGK 331 (840)
Q Consensus 298 k~----------------------------------------------~~~~~l~sGt~v~~G~~~~~V~~vG~~T~~g~ 331 (840)
|- .-++.++++|.+.+|.+.+.|+.||.+|.
T Consensus 227 rl~vp~tQ~l~~~~el~~i~v~Ae~P~kdIh~F~Gt~~~~d~~~~~~LsventLWanTVvAs~t~~gvVvYTG~dtR--- 303 (1051)
T KOG0210|consen 227 RLPVPRTQHLTEDSELMEISVYAEKPQKDIHSFVGTFTITDSDKPESLSVENTLWANTVVASGTAIGVVVYTGRDTR--- 303 (1051)
T ss_pred eccchhhccCCcccchheEEEeccCcchhhHhhEEEEEEecCCCCCcccccceeeeeeeEecCcEEEEEEEecccHH---
Confidence 40 01357999999999999999999999994
Q ss_pred HHHhhcCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhcccCCCccccCCcChHHHHHHHHHHHHHHHHh
Q 003189 332 LMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVA 411 (840)
Q Consensus 332 i~~~~~~~~~~~tplq~~l~~~a~~~~~~~l~~a~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ai~ilvva 411 (840)
-+.+...+..+---++..+|.+.+++....+.++++.... .|.... |...++..+.++.-.
T Consensus 304 svMNts~pr~KvGllelEiN~ltKiL~~~vlvLs~vmv~~-----------~g~~~~--------wyi~~~RfllLFS~I 364 (1051)
T KOG0210|consen 304 SVMNTSRPRSKVGLLELEINGLTKILFCFVLVLSIVMVAM-----------KGFGSD--------WYIYIIRFLLLFSSI 364 (1051)
T ss_pred HHhccCCcccccceeeeecccHHHHHHHHHHHHHHHHHHh-----------hcCCCc--------hHHHHHHHHHHHhhh
Confidence 3444445555556677788888888776666555443221 111111 223344445555666
Q ss_pred cCCchHHHHHHHHHHHHHHHhcc----ccccccchhhhccCCeeEEEecccCccccCceEEEEEEEcCeeeeec------
Q 003189 412 VPEGLPLAVTLSLAFAMKKMMND----KALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVD------ 481 (840)
Q Consensus 412 ~P~~Lplav~l~l~~~~~~l~~~----~ilvr~~~a~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~------ 481 (840)
+|..|-.-+.++-.+-...+.++ |.+||....-|.||++.++.+|||||||+|+|.+.++..+.-.+..+
T Consensus 365 IPISLRvnlDmaK~~ys~~i~~D~~IpgtvvRSstIPEeLGRIsylLtDKTGTLTqNEM~~KKiHLGTv~~s~e~~~eV~ 444 (1051)
T KOG0210|consen 365 IPISLRVNLDMAKIVYSWQIEHDKNIPGTVVRSSTIPEELGRISYLLTDKTGTLTQNEMEFKKIHLGTVAYSAETMDEVS 444 (1051)
T ss_pred ceeEEEEehhHHHhhHhhhcccCCCCCceeeecCCChHHhcceEEEEecCcCccccchheeeeeeeeeeeccHhHHHHHH
Confidence 89999999999988888888877 67799999999999999999999999999999999998874333211
Q ss_pred -------CC---CCC---CCCCCCCChhHHHHHHHHHHhcCCceEEecCCC-ceeEcCChhhHHHHHHHHHcCCChH---
Q 003189 482 -------NS---KGT---PAFGSSIPASASKLLLQSIFNNTGGEVVIGEGN-KTEILGTPTETAILEFGLLLGGDFQ--- 544 (840)
Q Consensus 482 -------~~---~~~---~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~-~~~~~g~p~e~All~~~~~~~~~~~--- 544 (840)
.+ .+. .......+..+. -+.++++.||+.....++++ ..+...+|.|.||++|....|+..-
T Consensus 445 ~~i~s~~~~~~~~~~~~~~~~k~~~s~rv~-~~V~alalCHNVTPv~e~~ge~sYQAaSPDEVAiVkwTe~VGl~L~~Rd 523 (1051)
T KOG0210|consen 445 QHIQSLYTPGRNKGKGALSRVKKDMSARVR-NAVLALALCHNVTPVFEDDGEVSYQAASPDEVAIVKWTETVGLKLAKRD 523 (1051)
T ss_pred HHHHHhhCCCcccccccchhhcCcccHHHH-HHHHHHHHhccCCcccCCCceEEeecCCCCeEEEEEeeeecceEEeecc
Confidence 00 000 000112222233 34467777777766666554 4456789999999999887775432
Q ss_pred ----------HHhhccceEEEecCCCCCceEEEEEEeC-CCcEEEEEcCchHHHHHhcccccccCCceeeCCHHHHHHHH
Q 003189 545 ----------AERQASKIVKVEPFNSVKKQMGVVIELP-EGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLN 613 (840)
Q Consensus 545 ----------~~~~~~~i~~~~pF~s~~k~~~vv~~~~-~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~ 613 (840)
+...+++|++.+||+|+.||||++++.+ .+++..|.|||.-.+-..- +| .++++
T Consensus 524 ~~~itL~~~~~~~~~yqIL~vFPFtsEtKRMGIIVr~e~~~evtfylKGAD~VMs~iV-q~--------------NdWle 588 (1051)
T KOG0210|consen 524 RHAITLRVPLDDELNYQILQVFPFTSETKRMGIIVRDETTEEVTFYLKGADVVMSGIV-QY--------------NDWLE 588 (1051)
T ss_pred cceEEEecCCCcceeEEEEEEeccccccceeeEEEecCCCceEEEEEecchHHHhccc-cc--------------chhhh
Confidence 1223789999999999999999999976 6889999999965543322 11 23578
Q ss_pred HHHHHHHHcccceeEEEEEEcCCCCCC--------------C---------CCCCCCceeeeeeecccCCCCcchHHHHH
Q 003189 614 ETIEKFASEALRTLCLACMEIGNEFSA--------------D---------APIPTEGYTCIGIVGIKDPMRPGVKESVA 670 (840)
Q Consensus 614 ~~~~~~~~~glr~l~~A~~~~~~~~~~--------------~---------~~~~~~~~~~lg~~~~~D~lR~~~~~aI~ 670 (840)
+...+||.+|+|++.+|.|.++.+.-+ + ...+|.|+.++|+.|.+|.++++++.+++
T Consensus 589 EE~gNMAREGLRtLVvakK~Ls~~eye~Fe~~y~~A~lSi~dR~~~ma~vv~~~LE~dlelL~LTGVEDkLQ~dVk~tLE 668 (1051)
T KOG0210|consen 589 EECGNMAREGLRTLVVAKKVLSEEEYEAFEEAYNAAKLSISDRDQKMANVVERYLERDLELLGLTGVEDKLQDDVKPTLE 668 (1051)
T ss_pred hhhhhhhhhcceEEEEEecccCHHHHHHHHHHHHhhhCccchHHHHHHHHHHHHHHhhhHHhcccChHHHHhhhhHhHHH
Confidence 889999999999999999999865100 0 12568899999999999999999999999
Q ss_pred HHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCC----------------------------ccccChhhhc---CCHHH
Q 003189 671 ICRSAGITVRMVTGDNINTAKAIARECGILTDNG----------------------------IAIEGPEFRE---KSDEE 719 (840)
Q Consensus 671 ~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~----------------------------~~~~g~~~~~---~~~~~ 719 (840)
.||+|||++||+|||..+||..||+..++...+. ++++|+.+.. .-++|
T Consensus 669 lLRNAgikiWMLTGDKlETA~ciAkSs~L~sR~q~ihv~~~v~sr~dah~eL~~lR~k~~~aLvi~G~Sl~~cl~yye~E 748 (1051)
T KOG0210|consen 669 LLRNAGIKIWMLTGDKLETAICIAKSSRLFSRGQYIHVIRSVTSRGDAHNELNNLRRKTDCALVIDGESLEFCLKYYEDE 748 (1051)
T ss_pred HHhhcCcEEEEEcCcchhheeeeehhccceecCceEEEEEecCCchHHHHHHHHhhcCCCcEEEEcCchHHHHHHHHHHH
Confidence 9999999999999999999999999999976432 6778877653 34566
Q ss_pred Hhhhc--CCceEEEecCcccHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEEecCCCcH--HHHhhcCEEeccCC
Q 003189 720 LSKLI--PKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTE--VAKESADVIILDDN 795 (840)
Q Consensus 720 ~~~~~--~~~~v~ar~~P~~K~~~V~~l~~~~g~~v~~~GDG~ND~~al~~Advgiamg~~g~~--~ak~~aDivlldd~ 795 (840)
+.++. ....|+|||+|.||+++++.+|++.|..|+.+|||.||..|+++||+||.. -|.| .|.-+||+.+..
T Consensus 749 f~el~~~~~aVv~CRctPtQKA~v~~llq~~t~krvc~IGDGGNDVsMIq~A~~GiGI--~gkEGkQASLAADfSItq-- 824 (1051)
T KOG0210|consen 749 FIELVCELPAVVCCRCTPTQKAQVVRLLQKKTGKRVCAIGDGGNDVSMIQAADVGIGI--VGKEGKQASLAADFSITQ-- 824 (1051)
T ss_pred HHHHHHhcCcEEEEecChhHHHHHHHHHHHhhCceEEEEcCCCccchheeecccceee--ecccccccchhccccHHH--
Confidence 66654 344599999999999999999998899999999999999999999999944 4444 366789999987
Q ss_pred chHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 003189 796 FSTIVTVAKW-GRSVYINIQKFVQFQLTVNVVALIVNFSSA 835 (840)
Q Consensus 796 f~~i~~~i~~-gR~~~~~i~k~i~f~l~~N~~~l~~~~~~~ 835 (840)
|+.+-+++.| ||+.|++--+.-||.+-..++.-.+..+++
T Consensus 825 F~Hv~rLLl~HGR~SYkrsa~laqfViHRGL~Is~~Qavfs 865 (1051)
T KOG0210|consen 825 FSHVSRLLLWHGRNSYKRSAKLAQFVIHRGLIISTMQAVFS 865 (1051)
T ss_pred HHHHHHHhhccccchHHHHHHHHHHHHhhhHHHHHHHHHHH
Confidence 9999999666 999999999999999888776665555544
No 33
>COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.6e-61 Score=510.80 Aligned_cols=482 Identities=28% Similarity=0.399 Sum_probs=380.2
Q ss_pred HHHHHHHHHHHhHhHhhhcCceEEEEEC-CeEEEEeccCCCCCcEEEecCCCcccccEEEEeecceEEecccccCCCCcc
Q 003189 218 ATSDYKQSLQFKDLDREKKKITVQVARN-GFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPV 296 (840)
Q Consensus 218 ~~~~~~~~~~~~~l~~~~~~~~v~V~Rd-G~~~~I~~~dLvvGDIV~l~~Gd~VPaDgvll~g~~l~VDES~LTGES~pv 296 (840)
++.+-+-..|...|.+-+....++++++ |..+.|++.+|..||+|.++.||.||+||.+++|.. +||||.+||||.||
T Consensus 84 a~AEGrgKAqAdsLr~~~~~~~A~~l~~~g~~~~v~st~Lk~gdiV~V~age~IP~DGeVIeG~a-sVdESAITGESaPV 162 (681)
T COG2216 84 AVAEGRGKAQADSLRKTKTETIARLLRADGSIEMVPATELKKGDIVLVEAGEIIPSDGEVIEGVA-SVDESAITGESAPV 162 (681)
T ss_pred HHHcccchHHHHHHHHHHHHHHHHHhcCCCCeeeccccccccCCEEEEecCCCccCCCeEEeeee-ecchhhccCCCcce
Confidence 3344444445555655445556677775 899999999999999999999999999999999975 99999999999999
Q ss_pred ccCCCCCe--EEeccEEeeceEEEEEEEEcccchHHHHHHhhcCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003189 297 NVNALNPF--LLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQ 374 (840)
Q Consensus 297 ~k~~~~~~--l~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~~~tplq~~l~~~a~~~~~~~l~~a~~~~~v~~~ 374 (840)
.|..+..+ +-.||.+++..+++++++.-.+|.+-++..+++.++.+|||-+..++- ...++.+..+..++ .
T Consensus 163 iresGgD~ssVtGgT~v~SD~l~irita~pG~sFlDrMI~LVEgA~R~KTPNEIAL~i-----LL~~LTliFL~~~~--T 235 (681)
T COG2216 163 IRESGGDFSSVTGGTRVLSDWLKIRITANPGETFLDRMIALVEGAERQKTPNEIALTI-----LLSGLTLIFLLAVA--T 235 (681)
T ss_pred eeccCCCcccccCCcEEeeeeEEEEEEcCCCccHHHHHHHHhhchhccCChhHHHHHH-----HHHHHHHHHHHHHH--h
Confidence 99877432 899999999999999999999999999999999999999997755542 22222211111111 1
Q ss_pred hHhhhcccCCCccccCCcChHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHhccccccccchhhhccCCeeEEE
Q 003189 375 GLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSIC 454 (840)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ai~ilvva~P~~Lplav~l~l~~~~~~l~~~~ilvr~~~a~E~lg~v~~I~ 454 (840)
-|.+..+..+. . -.+..-++++|..+|-.+.-.++.-=..+|.|+.+.|++-++..|+|..|.+|++.
T Consensus 236 l~p~a~y~~g~-------~-----~~i~~LiALlV~LIPTTIGgLLsAIGIAGMdRv~~~NViA~SGRAVEaaGDvdtli 303 (681)
T COG2216 236 LYPFAIYSGGG-------A-----ASVTVLVALLVCLIPTTIGGLLSAIGIAGMDRVTQFNVIATSGRAVEAAGDVDTLL 303 (681)
T ss_pred hhhHHHHcCCC-------C-----cCHHHHHHHHHHHhcccHHHHHHHhhhhhhhHhhhhceeecCcchhhhcCCccEEE
Confidence 11111111110 0 11344577888889988877777666779999999999999999999999999999
Q ss_pred ecccCccccCceEEEEEEEcCeeeeecCCCCCCCCCCCCChhHHHHHHHHHHhcCCceEEecCCCceeEcCChhhHHHHH
Q 003189 455 SDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILE 534 (840)
Q Consensus 455 ~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~g~p~e~All~ 534 (840)
.|||||+|.|+-.-.++++.+... . .+ +..+...++ +. -..|..+.+++
T Consensus 304 LDKTGTIT~GnR~A~~f~p~~gv~----------------~--~~-la~aa~lsS---l~---------DeTpEGrSIV~ 352 (681)
T COG2216 304 LDKTGTITLGNRQASEFIPVPGVS----------------E--EE-LADAAQLAS---LA---------DETPEGRSIVE 352 (681)
T ss_pred ecccCceeecchhhhheecCCCCC----------------H--HH-HHHHHHHhh---hc---------cCCCCcccHHH
Confidence 999999999987777766544331 1 11 222222222 11 24678889999
Q ss_pred HHHHcCCChHHHhhccceEEEecCCCCCceEEEEEEeCCCcEEEEEcCchHHHHHhcccccccCCceeeCCHHHHHHHHH
Q 003189 535 FGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNE 614 (840)
Q Consensus 535 ~~~~~~~~~~~~~~~~~i~~~~pF~s~~k~~~vv~~~~~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~ 614 (840)
.+++++.+.+...... -....||+.+.+++++-. +++ +-.-||+.+.+....+ ..|...| ..++.
T Consensus 353 LA~~~~~~~~~~~~~~-~~~fvpFtA~TRmSGvd~--~~~--~~irKGA~dai~~~v~----~~~g~~p------~~l~~ 417 (681)
T COG2216 353 LAKKLGIELREDDLQS-HAEFVPFTAQTRMSGVDL--PGG--REIRKGAVDAIRRYVR----ERGGHIP------EDLDA 417 (681)
T ss_pred HHHHhccCCCcccccc-cceeeecceecccccccC--CCC--ceeecccHHHHHHHHH----hcCCCCC------HHHHH
Confidence 9998876543322211 346789999888877643 333 5567999999987654 2232222 45677
Q ss_pred HHHHHHHcccceeEEEEEEcCCCCCCCCCCCCCceeeeeeecccCCCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHH
Q 003189 615 TIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIA 694 (840)
Q Consensus 615 ~~~~~~~~glr~l~~A~~~~~~~~~~~~~~~~~~~~~lg~~~~~D~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA 694 (840)
..++.++.|-..++++ .|..++|++.++|-++||.+|=+.+||+.||+.+|+||||+.||.+||
T Consensus 418 ~~~~vs~~GGTPL~V~----------------~~~~~~GVI~LkDivK~Gi~ERf~elR~MgIkTvM~TGDN~~TAa~IA 481 (681)
T COG2216 418 AVDEVSRLGGTPLVVV----------------ENGRILGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIA 481 (681)
T ss_pred HHHHHHhcCCCceEEE----------------ECCEEEEEEEehhhcchhHHHHHHHHHhcCCeEEEEeCCCHHHHHHHH
Confidence 8888899999888886 567899999999999999999999999999999999999999999999
Q ss_pred HHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCcccHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEE
Q 003189 695 RECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLA 774 (840)
Q Consensus 695 ~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~~V~~l~~~~g~~v~~~GDG~ND~~al~~Advgia 774 (840)
+|.|+++ ..|.++|+||.++|+.-|.+ |+.|+|||||+||+|||.+||||+|
T Consensus 482 ~EAGVDd---------------------------fiAeatPEdK~~~I~~eQ~~-grlVAMtGDGTNDAPALAqAdVg~A 533 (681)
T COG2216 482 AEAGVDD---------------------------FIAEATPEDKLALIRQEQAE-GRLVAMTGDGTNDAPALAQADVGVA 533 (681)
T ss_pred HHhCchh---------------------------hhhcCChHHHHHHHHHHHhc-CcEEEEcCCCCCcchhhhhcchhhh
Confidence 9999976 89999999999999999999 9999999999999999999999999
Q ss_pred ecCCCcHHHHhhcCEEeccCCchHHHHHHHHHHHHH
Q 003189 775 MGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVY 810 (840)
Q Consensus 775 mg~~g~~~ak~~aDivlldd~f~~i~~~i~~gR~~~ 810 (840)
|. +||..|||++++|=+|.|...+.+++..|+...
T Consensus 534 MN-sGTqAAkEAaNMVDLDS~PTKlievV~IGKqlL 568 (681)
T COG2216 534 MN-SGTQAAKEAANMVDLDSNPTKLIEVVEIGKQLL 568 (681)
T ss_pred hc-cccHHHHHhhcccccCCCccceehHhhhhhhhe
Confidence 99 999999999999999999999999999999864
No 34
>PF00122 E1-E2_ATPase: E1-E2 ATPase p-type cation-transporting ATPase superfamily signature H+-transporting ATPase (proton pump) signature sodium/potassium-transporting ATPase signature; InterPro: IPR008250 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the actuator (A) domain, and some transmembrane helices found in P-type ATPases []. It contains the TGES-loop which is essential for the metal ion binding which results in tight association between the A and P (phosphorylation) domains []. It does not contain the phosphorylation site. It is thought that the large movement of the actuator domain, which is transmitted to the transmembrane helices, is essential to the long distance coupling between formation/decomposition of the acyl phosphate in the cytoplasmic P-domain and the changes in the ion-binding sites buried deep in the membranous region []. This domain has a modulatory effect on the phosphoenzyme processing steps through its nucleotide binding [],[]. P-type (or E1-E2-type) ATPases that form an aspartyl phosphate intermediate in the course of ATP hydrolysis, can be divided into 4 major groups []: (1) Ca2+-transporting ATPases; (2) Na+/K+- and gastric H+/K+-transporting ATPases; (3) plasma membrane H+-transporting ATPases (proton pumps) of plants, fungi and lower eukaryotes; and (4) all bacterial P-type ATPases, except the g2+-ATPase of Salmonella typhimurium, which is more similar to the eukaryotic sequences. However, great variety of sequence analysis methods results in diversity of classification. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0000166 nucleotide binding, 0046872 metal ion binding; PDB: 2XZB_A 1MHS_B 3TLM_A 3A3Y_A 2ZXE_A 3NAL_A 3NAM_A 3NAN_A 2YJ6_B 2IYE_A ....
Probab=100.00 E-value=8.8e-35 Score=303.36 Aligned_cols=223 Identities=33% Similarity=0.554 Sum_probs=187.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhHhHhhhcCceEEEEECCeEEEEeccCCCCCcEEEecCCCcccccEEEEe-ecceEEe
Q 003189 207 VMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVS-GFSVLIN 285 (840)
Q Consensus 207 ~~~illv~~v~~~~~~~~~~~~~~l~~~~~~~~v~V~RdG~~~~I~~~dLvvGDIV~l~~Gd~VPaDgvll~-g~~l~VD 285 (840)
++.+++..++..+.+++.++..+++.+...+..++|+|||++++|+++||+|||+|.|++||++||||++++ | .+.||
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~r~~~~~~i~~~~L~~GDiI~l~~g~~vPaD~~ll~~g-~~~vd 81 (230)
T PF00122_consen 3 LFLILLSNIIEIWQEYRSKKQLKKLNNLNPQKKVTVIRDGRWQKIPSSELVPGDIIILKAGDIVPADGILLESG-SAYVD 81 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCTTSSSEEEEEEETTEEEEEEGGGT-TTSEEEEETTEBESSEEEEEESS-EEEEE
T ss_pred EEEhHHHHHHHHHHHHHHHHHHHHHhccCCCccEEEEeccccccchHhhccceeeeecccccccccCccceecc-ccccc
Confidence 344555566666777777777777776555545999999999999999999999999999999999999999 6 57999
Q ss_pred cccccCCCCccccCC----CCCeEEeccEEeeceEEEEEEEEcccchHHHHHHhhcCCCCCCChHHHHHHHHHHHHHHHH
Q 003189 286 ESSLTGESEPVNVNA----LNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIG 361 (840)
Q Consensus 286 ES~LTGES~pv~k~~----~~~~l~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~~~tplq~~l~~~a~~~~~~~ 361 (840)
||.+|||+.|+.|.+ .++++|+||.+.+|.+.++|++||.+|..|++.+.+.+...+++++++.+++++.++.++.
T Consensus 82 ~s~ltGes~pv~k~~~~~~~~~~i~~Gs~v~~g~~~~~Vi~tG~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (230)
T PF00122_consen 82 ESALTGESEPVKKTPLPLNPGNIIFAGSIVVSGWGIGVVIATGSDTKLGRILQLVSKSESKKSPLERKLNKIAKILIIII 161 (230)
T ss_dssp CHHHHSBSSEEEESSSCCCTTTEE-TTEEEEEEEEEEEEEE-GGGSHHHHHHHHHHTSCSS-THHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccccccchhhccccccccccccccceeeecccccccccccccccccchhhhhhhHHHHHHHHhcc
Confidence 999999999999981 3568999999999999999999999999999999998888888999999999999999988
Q ss_pred HHHHHHHHHHHHHhHhhhcccCCCccccCCcChHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHhccccccccc
Q 003189 362 LFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHL 441 (840)
Q Consensus 362 l~~a~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ai~ilvva~P~~Lplav~l~l~~~~~~l~~~~ilvr~~ 441 (840)
++++++++++++.. . ...++...+..++++++++|||+||+++++++.+++++|.++|+++|++
T Consensus 162 ~~~~~~~~~~~~~~------~----------~~~~~~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~~~~~~~~~i~v~~~ 225 (230)
T PF00122_consen 162 LAIAILVFIIWFFN------D----------SGISFFKSFLFAISLLIVLIPCALPLALPLSLAIAARRLAKNGIIVKNL 225 (230)
T ss_dssp HHHHHHHHHHCHTG------S----------TTCHCCHHHHHHHHHHHHHS-TTHHHHHHHHHHHHHHHHHHTTEEESST
T ss_pred cccchhhhccceec------c----------cccccccccccccceeeeecccceeehHHHHHHHHHHHHHHCCEEEeCc
Confidence 88887777554321 0 0113456788889999999999999999999999999999999999999
Q ss_pred hhhhc
Q 003189 442 AACET 446 (840)
Q Consensus 442 ~a~E~ 446 (840)
+++|+
T Consensus 226 ~a~E~ 230 (230)
T PF00122_consen 226 SALEA 230 (230)
T ss_dssp THHHH
T ss_pred ccccC
Confidence 99995
No 35
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=99.90 E-value=1.4e-23 Score=216.15 Aligned_cols=97 Identities=44% Similarity=0.717 Sum_probs=91.4
Q ss_pred ceeeeeeecccCCCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCc
Q 003189 648 GYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKI 727 (840)
Q Consensus 648 ~~~~lg~~~~~D~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 727 (840)
++.++|.+.+.||+||+++++|+.|+++|+++.|+|||+..++.++|+++||.. .
T Consensus 115 ~~~~~~~~~~~d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~~-------------------------~ 169 (215)
T PF00702_consen 115 NLIFLGLFGLRDPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIFD-------------------------S 169 (215)
T ss_dssp SHEEEEEEEEEEEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSCS-------------------------E
T ss_pred cCeEEEEEeecCcchhhhhhhhhhhhccCcceeeeecccccccccccccccccc-------------------------c
Confidence 688999999999999999999999999999999999999999999999999953 2
Q ss_pred eEEEec--CcccH--HHHHHHHHHhCCCEEEEEcCCccCHHHhhhCC
Q 003189 728 QVMARS--SPMDK--HTLVKHLRTTLGEVVAVTGDGTNDAPALHEAD 770 (840)
Q Consensus 728 ~v~ar~--~P~~K--~~~V~~l~~~~g~~v~~~GDG~ND~~al~~Ad 770 (840)
.|+++. +|++| ..+++.|+.. ++.|+|+|||.||++|+++||
T Consensus 170 ~v~a~~~~kP~~k~~~~~i~~l~~~-~~~v~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 170 IVFARVIGKPEPKIFLRIIKELQVK-PGEVAMVGDGVNDAPALKAAG 215 (215)
T ss_dssp EEEESHETTTHHHHHHHHHHHHTCT-GGGEEEEESSGGHHHHHHHSS
T ss_pred cccccccccccchhHHHHHHHHhcC-CCEEEEEccCHHHHHHHHhCc
Confidence 399999 99999 9999999966 679999999999999999997
No 36
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=99.57 E-value=9e-15 Score=129.89 Aligned_cols=124 Identities=23% Similarity=0.364 Sum_probs=106.2
Q ss_pred eeeeeecccCCCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceE
Q 003189 650 TCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQV 729 (840)
Q Consensus 650 ~~lg~~~~~D~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v 729 (840)
...+.++---.+=+++++.|++|++. +++++.|||...+....|+-.||... +|
T Consensus 20 ~v~~tiatgGklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae~~gi~~~-------------------------rv 73 (152)
T COG4087 20 KVLYTIATGGKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLAEFVGIPVE-------------------------RV 73 (152)
T ss_pred eEEEEEccCcEEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHHHHcCCcee-------------------------ee
Confidence 34566666677789999999999999 99999999999999999999999764 39
Q ss_pred EEecCcccHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEEecC--CCcHHHHhhcCEEeccCCchHHHHH
Q 003189 730 MARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGI--AGTEVAKESADVIILDDNFSTIVTV 802 (840)
Q Consensus 730 ~ar~~P~~K~~~V~~l~~~~g~~v~~~GDG~ND~~al~~Advgiamg~--~g~~~ak~~aDivlldd~f~~i~~~ 802 (840)
||...|+.|..+++.|++. ++.|.|+|||.||.+||++||+||+.=. ...+-+.++||+++-+ ...++++
T Consensus 74 ~a~a~~e~K~~ii~eLkk~-~~k~vmVGnGaND~laLr~ADlGI~tiq~e~v~~r~l~~ADvvik~--i~e~ldl 145 (152)
T COG4087 74 FAGADPEMKAKIIRELKKR-YEKVVMVGNGANDILALREADLGICTIQQEGVPERLLLTADVVLKE--IAEILDL 145 (152)
T ss_pred ecccCHHHHHHHHHHhcCC-CcEEEEecCCcchHHHhhhcccceEEeccCCcchHHHhhchhhhhh--HHHHHHH
Confidence 9999999999999999988 8999999999999999999999998732 2344467899999865 5555554
No 37
>KOG4383 consensus Uncharacterized conserved protein [Function unknown]
Probab=99.57 E-value=1.6e-12 Score=142.95 Aligned_cols=253 Identities=16% Similarity=0.230 Sum_probs=184.2
Q ss_pred CchHHHHHhcccccccCCceeeCCHHHHHHHHHHHHHHHHcccceeEEEEEEcCCC------------------------
Q 003189 582 GASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNE------------------------ 637 (840)
Q Consensus 582 Ga~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~glr~l~~A~~~~~~~------------------------ 637 (840)
|-...+.+.|+.++|. ....||+...+.++.+....-.-.| .|++||||+....
T Consensus 698 g~ad~~~eACTdfWdG-adi~PlSg~dkkkV~DFY~RaclsG-~C~AfaYkP~~caLasqL~GKciEl~~~p~~SkI~T~ 775 (1354)
T KOG4383|consen 698 GFADFFEEACTDFWDG-ADIIPLSGRDKKKVKDFYLRACLSG-HCLAFAYKPCFCALASQLAGKCIELPLNPEHSKIETA 775 (1354)
T ss_pred cHHHHHHHHhhhhcCC-ceeeecCcchHHHHHHHHHHHhhcc-cchheecccHHHHHHHHhCCceEEeccCcccchhhhh
Confidence 6678889999999974 4578999999988888877766666 5999999985421
Q ss_pred ---CCC--------------CC-----------CCCCCceeeeeeecccCCCCcchHHHHHHHHhCCCEEEEEcCCCHHH
Q 003189 638 ---FSA--------------DA-----------PIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINT 689 (840)
Q Consensus 638 ---~~~--------------~~-----------~~~~~~~~~lg~~~~~D~lR~~~~~aI~~l~~aGi~v~m~TGD~~~t 689 (840)
+.. ++ ....++.+|.|++..+.+.|++....|+.|.++.|+.+..|-.+...
T Consensus 776 celp~sipikqnar~S~~e~Degige~l~~e~c~Qa~sGQIf~GlVs~~Yea~ldiVriIdgL~naCiRfVYFS~EdELk 855 (1354)
T KOG4383|consen 776 CELPHSIPIKQNARESFDEIDEGIGERLADEACDQAFSGQIFCGLVSLHYEAILDIVRIIDGLDNACIRFVYFSKEDELK 855 (1354)
T ss_pred ccCCCCCcchhhhhhhhhhhccccceeccHhHHHHHhccchhhhhhhhhccchhhHHHHHHHhhhhheeeeeecchHHHH
Confidence 000 00 01124678999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCccCCC------------------------------------ccccChhhhcCCHHHH-------------
Q 003189 690 AKAIARECGILTDNG------------------------------------IAIEGPEFREKSDEEL------------- 720 (840)
Q Consensus 690 a~~iA~~~Gi~~~~~------------------------------------~~~~g~~~~~~~~~~~------------- 720 (840)
.+-.|.++||...++ +..+..+...+..|+.
T Consensus 856 SkVFAEKlGiEaGWNCHISLa~~~d~Pg~e~~pa~~q~a~qkpSlhddlnqia~ddaeg~lL~~Eeg~~dliSfq~~dsd 935 (1354)
T KOG4383|consen 856 SKVFAEKLGIEAGWNCHISLAEEEDAPGREAGPAHEQFAAQKPSLHDDLNQIALDDAEGELLDCEEGARDLISFQKMDSD 935 (1354)
T ss_pred HHHHHHHhccccccceeEEeccCCCCCcccCCCCChhhhccCcchhHHHHHhhhcccccceeehhhcccCCccccccccc
Confidence 999999999976432 1111111111111110
Q ss_pred --------------------hhhcC-------CceEEEecCcccHHHHHHHHHHhCCCEEEEEcCCccC--HHHhhhCCc
Q 003189 721 --------------------SKLIP-------KIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTND--APALHEADI 771 (840)
Q Consensus 721 --------------------~~~~~-------~~~v~ar~~P~~K~~~V~~l~~~~g~~v~~~GDG~ND--~~al~~Adv 771 (840)
...+. -+-.|..++|+.--++|+.+|++ |++++.+|...|- .-.+-+|||
T Consensus 936 i~kf~ed~N~AkLPrGihnVRPHL~~iDNVPLLV~LFTDcnpeamcEMIeIMQE~-GEVtcclGS~aN~rNSciflkadI 1014 (1354)
T KOG4383|consen 936 IAKFAEDPNIAKLPRGIHNVRPHLDEIDNVPLLVGLFTDCNPEAMCEMIEIMQEN-GEVTCCLGSCANARNSCIFLKADI 1014 (1354)
T ss_pred hhhhcCCCchhhcCcchhhcCcccccccCcceeeeeccCCCHHHHHHHHHHHHHc-CcEEEEeccccccccceEEEccce
Confidence 00000 01278889999999999999998 9999999999884 345678999
Q ss_pred cEEecC------------CCcHH-HHh-----------------hcCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHH
Q 003189 772 GLAMGI------------AGTEV-AKE-----------------SADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQL 821 (840)
Q Consensus 772 giamg~------------~g~~~-ak~-----------------~aDivlldd~f~~i~~~i~~gR~~~~~i~k~i~f~l 821 (840)
+||+-- -++.. ..+ ++|+-+-...+-+|..+|..+|.....+|+.+.|.|
T Consensus 1015 SialD~l~~~~C~~e~fg~assismaqandglsplQiSgqLnaL~c~~~f~~ee~ikiirLIe~ARHa~~g~R~cfLFiL 1094 (1354)
T KOG4383|consen 1015 SIALDDLEEPACRLEDFGVASSISMAQANDGLSPLQISGQLNALACDFRFDHEELIKIIRLIECARHAMSGFRHCFLFIL 1094 (1354)
T ss_pred eEEeccCCCccceecccccchhhhhhhhcCCCCceeecccccccccccchhHHHHHHHHHHHHHHHHHhhhhHHHHHHHH
Confidence 998731 11111 111 234444444566788899999999999999999999
Q ss_pred HHHHHHHHHHHHHhhh
Q 003189 822 TVNVVALIVNFSSACL 837 (840)
Q Consensus 822 ~~N~~~l~~~~~~~~~ 837 (840)
...+...++.|++.++
T Consensus 1095 q~qL~l~Vi~flSc~~ 1110 (1354)
T KOG4383|consen 1095 QAQLLLSVIIFLSCFF 1110 (1354)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999888888888765
No 38
>PF12515 CaATP_NAI: Ca2+-ATPase N terminal autoinhibitory domain; InterPro: IPR024750 This entry represents the N-terminal autoinhibitory calmodulin-binding domain characteristic of certain calcium-transporting ATPases []. This domain binds calmodulin in a calcium-dependent fashion and has a conserved RRFR sequence motif. There are two completely conserved residues (F and W) that may be functionally important.; GO: 0005516 calmodulin binding
Probab=99.54 E-value=1.8e-15 Score=109.66 Aligned_cols=46 Identities=63% Similarity=1.076 Sum_probs=43.6
Q ss_pred cccccCCCCCCCCCcHHHHHHHHHhhcccccccccchhhhccchhhh
Q 003189 4 YLNENFSDVKAKNTSEEALQRWRKLCGFVKNRKRRFRFTANLSKRFE 50 (840)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~r~f~~~~~~~~~~e 50 (840)
|+.++|+ +++||+|+|+++|||+|+++|+|++|||||+++|+|+.|
T Consensus 1 yl~~~Fd-i~~Kn~s~e~l~rWR~a~~lv~N~~RRFR~~~dL~k~~e 46 (47)
T PF12515_consen 1 YLDDNFD-IPAKNSSEEALRRWRQAVGLVKNARRRFRYTADLKKREE 46 (47)
T ss_pred CCccccC-CCCCCCCHHHHHHHHHHhHHhccccceeeecccHhhHhc
Confidence 6789998 999999999999999999999999999999999998875
No 39
>PF13246 Hydrolase_like2: Putative hydrolase of sodium-potassium ATPase alpha subunit
Probab=99.51 E-value=4.9e-14 Score=123.48 Aligned_cols=87 Identities=38% Similarity=0.604 Sum_probs=71.1
Q ss_pred hcCCceEEecCCCc-eeEcCChhhHHHHHHHHHc--CCChHHHhhccceEEEecCCCCCceEEEEEEeCCCcEEEEEcCc
Q 003189 507 NNTGGEVVIGEGNK-TEILGTPTETAILEFGLLL--GGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGA 583 (840)
Q Consensus 507 ~~~~~~~~~~~~~~-~~~~g~p~e~All~~~~~~--~~~~~~~~~~~~i~~~~pF~s~~k~~~vv~~~~~~~~~~~~KGa 583 (840)
+|+++.+..+++.. .+..|+|+|.||+.|+... +.+....+..+++++.+||+|++|+|+++++ .++.+.+++|||
T Consensus 2 LCn~a~~~~~~~~~~~~~~G~ptE~ALl~~~~~~g~~~~~~~~~~~~~~~~~~pF~S~rK~msvv~~-~~~~~~~~~KGA 80 (91)
T PF13246_consen 2 LCNDAEIEYDDESKTEEIIGDPTEKALLRFAKKLGVGIDIKEIRSKYKIVAEIPFDSERKRMSVVVR-NDGKYILYVKGA 80 (91)
T ss_pred CccccEeecCCCCccccccCCcCHHHHHHHHHHcCCCCcHHHHHhhcceeEEEccCcccceeEEEEe-CCCEEEEEcCCC
Confidence 35556665444332 3489999999999999998 4567889999999999999999999999998 334577799999
Q ss_pred hHHHHHhcccc
Q 003189 584 SEIILAACDKF 594 (840)
Q Consensus 584 ~e~il~~c~~~ 594 (840)
||.||++|+++
T Consensus 81 ~e~il~~Ct~i 91 (91)
T PF13246_consen 81 PEVILDRCTHI 91 (91)
T ss_pred hHHHHHhcCCC
Confidence 99999999863
No 40
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=99.15 E-value=4.2e-10 Score=120.41 Aligned_cols=68 Identities=31% Similarity=0.381 Sum_probs=61.6
Q ss_pred ccHHHHHHHHHHhCC---CEEEEEcCCccCHHHhhhCCccEEecCCCcHHHHhhcCEEeccCCchHHHHHHH
Q 003189 736 MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAK 804 (840)
Q Consensus 736 ~~K~~~V~~l~~~~g---~~v~~~GDG~ND~~al~~Advgiamg~~g~~~ak~~aDivlldd~f~~i~~~i~ 804 (840)
.+|...++.|.+++| +.|+++|||.||.+||+.|++|+||| ++.+.+|+.||+|..+++=.++..+++
T Consensus 195 vsKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~-NA~~~vK~~A~~vt~~n~~dGva~~i~ 265 (270)
T PRK10513 195 VNKGTGVKSLAEHLGIKPEEVMAIGDQENDIAMIEYAGVGVAMG-NAIPSVKEVAQFVTKSNLEDGVAFAIE 265 (270)
T ss_pred CChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhCCceEEec-CccHHHHHhcCeeccCCCcchHHHHHH
Confidence 679999999888766 57899999999999999999999999 999999999999998888888887774
No 41
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=99.08 E-value=1.1e-09 Score=117.18 Aligned_cols=145 Identities=18% Similarity=0.232 Sum_probs=104.0
Q ss_pred CCCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccC----CC-ccc--cCh---------------------
Q 003189 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD----NG-IAI--EGP--------------------- 710 (840)
Q Consensus 659 D~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~----~~-~~~--~g~--------------------- 710 (840)
..+.+.++++|++++++|+++.+.||++...+..+.+++|+... |+ .+. .|.
T Consensus 18 ~~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~I~~~~~~~l~~~~i~~~~~~~i~~~~~~ 97 (272)
T PRK15126 18 HHLGEKTLSTLARLRERDITLTFATGRHVLEMQHILGALSLDAYLITGNGTRVHSLEGELLHRQDLPADVAELVLHQQWD 97 (272)
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCcEEecCCcEEEcCCCCEEEeecCCHHHHHHHHHHhhh
Confidence 35889999999999999999999999999999999999998531 22 000 000
Q ss_pred --------------------hh----------------hcC------------CHHH-------HhhhcC-CceEE----
Q 003189 711 --------------------EF----------------REK------------SDEE-------LSKLIP-KIQVM---- 730 (840)
Q Consensus 711 --------------------~~----------------~~~------------~~~~-------~~~~~~-~~~v~---- 730 (840)
.+ ..+ .+++ +.+.+. ++.+.
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~~~l~~~~~~~~~~~~s~~ 177 (272)
T PRK15126 98 TRASMHVFNDDGWFTGKEIPALLQAHVYSGFRYQLIDLKRLPAHGVTKICFCGDHDDLTRLQIQLNEALGERAHLCFSAT 177 (272)
T ss_pred cCcEEEEEcCCeEEecCCcHHHHHHHHhcCCceEEecHHHccccCceEEEEECCHHHHHHHHHHHHHHhcCCEEEEEcCC
Confidence 00 000 0011 001111 11111
Q ss_pred --EecCc--ccHHHHHHHHHHhCC---CEEEEEcCCccCHHHhhhCCccEEecCCCcHHHHhhcCE--EeccCCchHHHH
Q 003189 731 --ARSSP--MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADV--IILDDNFSTIVT 801 (840)
Q Consensus 731 --ar~~P--~~K~~~V~~l~~~~g---~~v~~~GDG~ND~~al~~Advgiamg~~g~~~ak~~aDi--vlldd~f~~i~~ 801 (840)
....| ..|...++.|.+.+| +.|+++|||.||.+||+.|+.|+||| ++.+.+|+.||. |..+++-.++..
T Consensus 178 ~~~eI~~~g~sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~-Na~~~vK~~A~~~~v~~~n~edGva~ 256 (272)
T PRK15126 178 DCLEVLPVGCNKGAALAVLSQHLGLSLADCMAFGDAMNDREMLGSVGRGFIMG-NAMPQLRAELPHLPVIGHCRNQAVSH 256 (272)
T ss_pred cEEEeecCCCChHHHHHHHHHHhCCCHHHeEEecCCHHHHHHHHHcCCceecc-CChHHHHHhCCCCeecCCCcchHHHH
Confidence 12223 479999999988877 57899999999999999999999999 999999999996 666777788887
Q ss_pred HHH
Q 003189 802 VAK 804 (840)
Q Consensus 802 ~i~ 804 (840)
+++
T Consensus 257 ~l~ 259 (272)
T PRK15126 257 YLT 259 (272)
T ss_pred HHH
Confidence 774
No 42
>PF00690 Cation_ATPase_N: Cation transporter/ATPase, N-terminus; InterPro: IPR004014 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases [, ]. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3KDP_C 3N2F_A 3B8E_A 3N23_A 2XZB_A 1MHS_B 3A3Y_A 2ZXE_A 3B8C_A 3B9B_A ....
Probab=99.07 E-value=2.3e-10 Score=94.84 Aligned_cols=67 Identities=25% Similarity=0.541 Sum_probs=63.3
Q ss_pred hcCHHHHHHHhCCCcCCCCCccHHHHHHHHHhcCCCCCCCCCCccHHHHHHHHHhhhHHHHHHHHHHHH
Q 003189 118 HGGVEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCALVS 186 (840)
Q Consensus 118 ~~gv~~l~~~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~~f~~~~~~~l~~~~~~il~i~a~is 186 (840)
..+++++++.|+++...||+.++ +.+|++.||+|.++.++.+++|+.++++|+++++++|++++++|
T Consensus 3 ~~~~~~v~~~l~t~~~~GLs~~e--v~~r~~~~G~N~l~~~~~~s~~~~~~~~f~~~~~~lL~~aailS 69 (69)
T PF00690_consen 3 QLSVEEVLKRLNTSSSQGLSSEE--VEERRKKYGPNELPEPKKKSLWRIFLKQFKNPFIILLLIAAILS 69 (69)
T ss_dssp TSSHHHHHHHHTTBTSSBBTHHH--HHHHHHHHSSSSTTTTTSSSHHHHHHHHTTSHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHCcCCCCCCCHHH--HHHHHHhcccccccccccCcHHHHHHHHHHhHHHHHHHHHHHHC
Confidence 45789999999999999999876 99999999999999999999999999999999999999999986
No 43
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=99.06 E-value=9.6e-10 Score=119.22 Aligned_cols=129 Identities=21% Similarity=0.333 Sum_probs=100.7
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccC--CCc-cccChhhhcCCHHHHhhhcCCceEEE-ecCc
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD--NGI-AIEGPEFREKSDEELSKLIPKIQVMA-RSSP 735 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~--~~~-~~~g~~~~~~~~~~~~~~~~~~~v~a-r~~P 735 (840)
++.|++.+.++.|++.|+++.++||.....+..+.+++|+... +.+ +.+|.- .. .+.. -+..
T Consensus 181 ~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~~~an~lei~dg~l---------tg-----~v~g~iv~~ 246 (322)
T PRK11133 181 PLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDAAVANELEIMDGKL---------TG-----NVLGDIVDA 246 (322)
T ss_pred CCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCeEEEeEEEEECCEE---------Ee-----EecCccCCc
Confidence 5799999999999999999999999998889999999998531 000 000000 00 0000 0234
Q ss_pred ccHHHHHHHHHHhCC---CEEEEEcCCccCHHHhhhCCccEEecCCCcHHHHhhcCEEeccCCchHHHHHHH
Q 003189 736 MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAK 804 (840)
Q Consensus 736 ~~K~~~V~~l~~~~g---~~v~~~GDG~ND~~al~~Advgiamg~~g~~~ak~~aDivlldd~f~~i~~~i~ 804 (840)
..|...++.+.+++| +.+.++|||.||.+|++.|++|+|| ++.+..++.||+++...++..+..++-
T Consensus 247 k~K~~~L~~la~~lgi~~~qtIaVGDg~NDl~m~~~AGlgiA~--nAkp~Vk~~Ad~~i~~~~l~~~l~~~~ 316 (322)
T PRK11133 247 QYKADTLTRLAQEYEIPLAQTVAIGDGANDLPMIKAAGLGIAY--HAKPKVNEQAQVTIRHADLMGVLCILS 316 (322)
T ss_pred ccHHHHHHHHHHHcCCChhhEEEEECCHHHHHHHHHCCCeEEe--CCCHHHHhhCCEEecCcCHHHHHHHhc
Confidence 689999999887766 6799999999999999999999999 678888999999999889998887653
No 44
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=99.05 E-value=2.1e-09 Score=114.53 Aligned_cols=144 Identities=31% Similarity=0.416 Sum_probs=108.0
Q ss_pred CCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccC----CC-cccc-Chhh----------------------
Q 003189 661 MRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD----NG-IAIE-GPEF---------------------- 712 (840)
Q Consensus 661 lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~----~~-~~~~-g~~~---------------------- 712 (840)
+.+.++++|+++++.|+++.++||++...+..+.+++|+... |+ .+.. |+.+
T Consensus 21 i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~i~~~~l~~~~~~~i~~~~~~~~~ 100 (264)
T COG0561 21 ISPETKEALARLREKGVKVVLATGRPLPDVLSILEELGLDGPLITFNGALIYNGGELLFQKPLSREDVEELLELLEDFQG 100 (264)
T ss_pred cCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCccEEEeCCeEEecCCcEEeeecCCHHHHHHHHHHHHhccC
Confidence 899999999999999999999999999999999999999741 11 0000 0000
Q ss_pred -------------------------------------h----------cCCH---HHH----hhhcC-CceEEEecCc--
Q 003189 713 -------------------------------------R----------EKSD---EEL----SKLIP-KIQVMARSSP-- 735 (840)
Q Consensus 713 -------------------------------------~----------~~~~---~~~----~~~~~-~~~v~ar~~P-- 735 (840)
. .... ++. .+.++ ....+.+..|
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~s~~~~ 180 (264)
T COG0561 101 IALVLYTDDGIYLTKKRGTFAEARIGFANLSPVGREAAELEDNKIIALDKDHEILEELVEALRKRFPDLGLTVSSSGPIS 180 (264)
T ss_pred ceEEEEeccceeeccCCCcccccccccccccccccchhhcCcceEEEEecChHhHHHHHHHHhhhccccceEEEEcCCce
Confidence 0 0001 111 11111 2223333333
Q ss_pred -------ccHHHHHHHHHHhCCC---EEEEEcCCccCHHHhhhCCccEEecCCCcHHHHhhcCEEeccCCchHHHHHHHH
Q 003189 736 -------MDKHTLVKHLRTTLGE---VVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKW 805 (840)
Q Consensus 736 -------~~K~~~V~~l~~~~g~---~v~~~GDG~ND~~al~~Advgiamg~~g~~~ak~~aDivlldd~f~~i~~~i~~ 805 (840)
.+|...++.|.+++|- .|+++||+.||.+||+.|+.|+||| ++.+.+|+.||++....+-.+|..++++
T Consensus 181 lei~~~g~~K~~al~~l~~~lgi~~~~v~afGD~~ND~~Ml~~ag~gvam~-Na~~~~k~~A~~vt~~n~~~Gv~~~l~~ 259 (264)
T COG0561 181 LDITPKGVSKGYALQRLAKLLGIKLEEVIAFGDSTNDIEMLEVAGLGVAMG-NADEELKELADYVTTSNDEDGVAEALEK 259 (264)
T ss_pred EEEecCCCchHHHHHHHHHHhCCCHHHeEEeCCccccHHHHHhcCeeeecc-CCCHHHHhhCCcccCCccchHHHHHHHH
Confidence 6899999999887673 4999999999999999999999999 8899999999988889999999988765
No 45
>PRK10976 putative hydrolase; Provisional
Probab=99.04 E-value=2.6e-09 Score=113.95 Aligned_cols=68 Identities=24% Similarity=0.285 Sum_probs=59.5
Q ss_pred ccHHHHHHHHHHhCC---CEEEEEcCCccCHHHhhhCCccEEecCCCcHHHHhhcC--EEeccCCchHHHHHHH
Q 003189 736 MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESAD--VIILDDNFSTIVTVAK 804 (840)
Q Consensus 736 ~~K~~~V~~l~~~~g---~~v~~~GDG~ND~~al~~Advgiamg~~g~~~ak~~aD--ivlldd~f~~i~~~i~ 804 (840)
.+|...++.|.+++| +.|+++|||.||.+||+.|+.|+||| ++.+.+|+.|| .|..+++=.++..+++
T Consensus 189 vsKg~al~~l~~~lgi~~~~viafGD~~NDi~Ml~~ag~~vAm~-NA~~~vK~~A~~~~v~~~n~edGVa~~l~ 261 (266)
T PRK10976 189 VSKGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGKGCIMG-NAHQRLKDLLPELEVIGSNADDAVPHYLR 261 (266)
T ss_pred CChHHHHHHHHHHcCCCHHHeEEEcCCcccHHHHHHcCCCeeec-CCcHHHHHhCCCCeecccCchHHHHHHHH
Confidence 569999999888766 56899999999999999999999999 99999999988 6777777778877764
No 46
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=99.03 E-value=1.5e-09 Score=110.33 Aligned_cols=129 Identities=16% Similarity=0.115 Sum_probs=95.4
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCC--CccccChhhhcCCHHHHhhhcCCceEEEecCccc
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDN--GIAIEGPEFREKSDEELSKLIPKIQVMARSSPMD 737 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~--~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~ 737 (840)
+++|++.+.|+.+++.| ++.++||-....+..+++++|+..-- .+.+.+.. .+... .. ..|.+
T Consensus 68 ~l~pga~ell~~lk~~~-~~~IVS~~~~~~~~~il~~lgi~~~~an~l~~~~~g-----------~~tG~-~~--~~~~~ 132 (203)
T TIGR02137 68 KPLEGAVEFVDWLRERF-QVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSD-----------RVVGY-QL--RQKDP 132 (203)
T ss_pred CCCccHHHHHHHHHhCC-eEEEEeCChHHHHHHHHHHcCCchhhceeeEEecCC-----------eeECe-ee--cCcch
Confidence 68999999999999975 99999999999999999999996311 11111100 00000 01 35789
Q ss_pred HHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEEecCCCcHHHHhhcCEEeccCCchHHHHHHHHH
Q 003189 738 KHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWG 806 (840)
Q Consensus 738 K~~~V~~l~~~~g~~v~~~GDG~ND~~al~~Advgiamg~~g~~~ak~~aDivlldd~f~~i~~~i~~g 806 (840)
|...++.+++. |..+.++|||.||.||++.||+|+++. +.+..++.||=.-.--+.+.+..++..+
T Consensus 133 K~~~l~~l~~~-~~~~v~vGDs~nDl~ml~~Ag~~ia~~--ak~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (203)
T TIGR02137 133 KRQSVIAFKSL-YYRVIAAGDSYNDTTMLSEAHAGILFH--APENVIREFPQFPAVHTYEDLKREFLKA 198 (203)
T ss_pred HHHHHHHHHhh-CCCEEEEeCCHHHHHHHHhCCCCEEec--CCHHHHHhCCCCCcccCHHHHHHHHHHH
Confidence 99999999877 878999999999999999999999996 4555555555443334577777776654
No 47
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=99.03 E-value=2.7e-09 Score=111.26 Aligned_cols=144 Identities=25% Similarity=0.312 Sum_probs=104.6
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccC----CC-cccc---Chhhhc--C--------------
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD----NG-IAIE---GPEFRE--K-------------- 715 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~----~~-~~~~---g~~~~~--~-------------- 715 (840)
++.|.+.++|+++++.|++++++||++...+..+++++|+... ++ .+.. +..+.. +
T Consensus 20 ~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (230)
T PRK01158 20 RLSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGTSGPVIAENGGVISVGFDGKRIFLGDIEECEKAYSELKKRF 99 (230)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCcEEEecCeEEEEcCCCCEEEEcchHHHHHHHHHHHHhc
Confidence 3788999999999999999999999999999999999998532 22 1111 110000 0
Q ss_pred -------------------------CHHHHhhhc----CCceE-----EEecCc--ccHHHHHHHHHHhCC---CEEEEE
Q 003189 716 -------------------------SDEELSKLI----PKIQV-----MARSSP--MDKHTLVKHLRTTLG---EVVAVT 756 (840)
Q Consensus 716 -------------------------~~~~~~~~~----~~~~v-----~ar~~P--~~K~~~V~~l~~~~g---~~v~~~ 756 (840)
..+++.+.+ ....+ +....| ..|...++.+.+++| +.++++
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ei~~~~~~Kg~al~~l~~~~~i~~~~~i~~ 179 (230)
T PRK01158 100 PEASTSLTKLDPDYRKTEVALRRTVPVEEVRELLEELGLDLEIVDSGFAIHIKSPGVNKGTGLKKLAELMGIDPEEVAAI 179 (230)
T ss_pred cccceeeecCCcccccceeeecccccHHHHHHHHHHcCCcEEEEecceEEEEeeCCCChHHHHHHHHHHhCCCHHHEEEE
Confidence 001111111 01111 112333 359999999887766 568999
Q ss_pred cCCccCHHHhhhCCccEEecCCCcHHHHhhcCEEeccCCchHHHHHHH
Q 003189 757 GDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAK 804 (840)
Q Consensus 757 GDG~ND~~al~~Advgiamg~~g~~~ak~~aDivlldd~f~~i~~~i~ 804 (840)
||+.||.+|++.|++|+||| ++.+.+|+.||+|..+++=.++.++++
T Consensus 180 GD~~NDi~m~~~ag~~vam~-Na~~~vk~~a~~v~~~n~~~Gv~~~l~ 226 (230)
T PRK01158 180 GDSENDLEMFEVAGFGVAVA-NADEELKEAADYVTEKSYGEGVAEAIE 226 (230)
T ss_pred CCchhhHHHHHhcCceEEec-CccHHHHHhcceEecCCCcChHHHHHH
Confidence 99999999999999999999 999999999999998888888887765
No 48
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=99.01 E-value=1.7e-09 Score=111.50 Aligned_cols=142 Identities=25% Similarity=0.332 Sum_probs=101.9
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccC----CC-ccccC-hhh-hc------C-----------
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD----NG-IAIEG-PEF-RE------K----------- 715 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~----~~-~~~~g-~~~-~~------~----------- 715 (840)
.+.|.+.++|++|+++|++++++||++...+..+++.+++... ++ .+... ... .. +
T Consensus 18 ~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~~~~i~~NGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (215)
T TIGR01487 18 MISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTSGPVVAENGGVIFYNKEDIFLANMEEEWFLDEEKKKRFPR 97 (215)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCCCcEEEccCcEEEeCCCcEEEecccchhhHHHhhhhhhhh
Confidence 4889999999999999999999999999999999999998632 22 11110 000 00 0
Q ss_pred -------------------CHHHHhhhcC--CceEE-----Ee--cCcccHHHHHHHHHHhCC---CEEEEEcCCccCHH
Q 003189 716 -------------------SDEELSKLIP--KIQVM-----AR--SSPMDKHTLVKHLRTTLG---EVVAVTGDGTNDAP 764 (840)
Q Consensus 716 -------------------~~~~~~~~~~--~~~v~-----ar--~~P~~K~~~V~~l~~~~g---~~v~~~GDG~ND~~ 764 (840)
..+.+...+. .+.+. .. ....+|...++.+.+.+| +.++++||+.||.+
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~iGDs~ND~~ 177 (215)
T TIGR01487 98 DRLSNEYPRASLVIMREGKDVDEVREIIKERGLNLVDSGFAIHIMKKGVDKGVGVEKLKELLGIKPEEVAAIGDSENDID 177 (215)
T ss_pred hhcccccceeEEEEecCCccHHHHHHHHHhCCeEEEecCceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECCCHHHHH
Confidence 0011111111 11111 11 224689999999988766 35899999999999
Q ss_pred HhhhCCccEEecCCCcHHHHhhcCEEeccCCchHHHHH
Q 003189 765 ALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTV 802 (840)
Q Consensus 765 al~~Advgiamg~~g~~~ak~~aDivlldd~f~~i~~~ 802 (840)
|++.|++|+||+ ++.+.+|+.||+|..+++-.+|.++
T Consensus 178 ml~~ag~~vam~-na~~~~k~~A~~v~~~~~~~Gv~~~ 214 (215)
T TIGR01487 178 LFRVVGFKVAVA-NADDQLKEIADYVTSNPYGEGVVEV 214 (215)
T ss_pred HHHhCCCeEEcC-CccHHHHHhCCEEcCCCCCchhhhh
Confidence 999999999999 9999999999999977666666543
No 49
>PLN02887 hydrolase family protein
Probab=98.97 E-value=5.6e-09 Score=121.06 Aligned_cols=68 Identities=32% Similarity=0.437 Sum_probs=60.0
Q ss_pred ccHHHHHHHHHHhCC---CEEEEEcCCccCHHHhhhCCccEEecCCCcHHHHhhcCEEeccCCchHHHHHHH
Q 003189 736 MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAK 804 (840)
Q Consensus 736 ~~K~~~V~~l~~~~g---~~v~~~GDG~ND~~al~~Advgiamg~~g~~~ak~~aDivlldd~f~~i~~~i~ 804 (840)
.+|...++.|.+.+| +.|+++|||.||.+||+.|++||||| +|.+.+|+.||+|..+++=.+|..+++
T Consensus 506 vSKG~ALk~L~e~lGI~~eeviAFGDs~NDIeMLe~AG~gVAMg-NA~eeVK~~Ad~VT~sNdEDGVA~aLe 576 (580)
T PLN02887 506 TSKGNGVKMLLNHLGVSPDEIMAIGDGENDIEMLQLASLGVALS-NGAEKTKAVADVIGVSNDEDGVADAIY 576 (580)
T ss_pred CCHHHHHHHHHHHcCCCHHHEEEEecchhhHHHHHHCCCEEEeC-CCCHHHHHhCCEEeCCCCcCHHHHHHH
Confidence 467777888877766 56899999999999999999999999 999999999999998888888888775
No 50
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=98.97 E-value=4.1e-09 Score=110.86 Aligned_cols=145 Identities=27% Similarity=0.346 Sum_probs=105.2
Q ss_pred cCCCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccC----CC-cc--------------------------
Q 003189 658 KDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD----NG-IA-------------------------- 706 (840)
Q Consensus 658 ~D~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~----~~-~~-------------------------- 706 (840)
...+.|.+.+++++++++|+++++.||++...+..+..++++... ++ .+
T Consensus 13 ~~~i~~~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~~~~I~~nGa~i~~~~~~~l~~~~i~~~~~~~i~~~~~ 92 (254)
T PF08282_consen 13 DGKISPETIEALKELQEKGIKLVIATGRSYSSIKRLLKELGIDDYFICSNGALIDDPKGKILYEKPIDSDDVKKILKYLK 92 (254)
T ss_dssp TSSSCHHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHHHTTHCSEEEEGGGTEEEETTTEEEEEESB-HHHHHHHHHHHH
T ss_pred CCeeCHHHHHHHHhhcccceEEEEEccCcccccccccccccchhhhcccccceeeecccccchhhheeccchhheeehhh
Confidence 345779999999999999999999999999999999999998621 11 00
Q ss_pred --------ccChhhh---------------------------------------cCCH-------HHHhhhcCCceEEEe
Q 003189 707 --------IEGPEFR---------------------------------------EKSD-------EELSKLIPKIQVMAR 732 (840)
Q Consensus 707 --------~~g~~~~---------------------------------------~~~~-------~~~~~~~~~~~v~ar 732 (840)
.++..+. ...+ +++.+.++....+.+
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~l~~~l~~~~~~~~~~~~ 172 (254)
T PF08282_consen 93 EHNISFFFYTDDDIYIYENKDEEELFFEHKFFNFKESIVSEDDLEDEEIFKILFFPDPEDLEQLREELKKKFPNLIDVVR 172 (254)
T ss_dssp HTTCEEEEEESSEEEESSTTCHHHHHHHHHHTSCEEEESHHHHHHCSSESEEEEESCHHHHHHHHHHHHHHHTTTEEEEE
T ss_pred hcccccccccceeeecccccccchhhhhhcccccccccccccccccccceeeeccccchhhhhhhhhhccccCcceeEEE
Confidence 0000000 0001 112222232212222
Q ss_pred -------c--CcccHHHHHHHHHHhCC---CEEEEEcCCccCHHHhhhCCccEEecCCCcHHHHhhcCEEeccCCchHHH
Q 003189 733 -------S--SPMDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIV 800 (840)
Q Consensus 733 -------~--~P~~K~~~V~~l~~~~g---~~v~~~GDG~ND~~al~~Advgiamg~~g~~~ak~~aDivlldd~f~~i~ 800 (840)
. ...+|...++.|.+.+| +.++++||+.||.+||+.|+.|+||+ ++++..|+.||++..+.+=.+|.
T Consensus 173 ~~~~~lei~~~~vsK~~ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~~~~~~am~-na~~~~k~~a~~i~~~~~~~gv~ 251 (254)
T PF08282_consen 173 SSPYFLEITPKGVSKGSAIKYLLEYLGISPEDIIAFGDSENDIEMLELAGYSVAMG-NATPELKKAADYITPSNNDDGVA 251 (254)
T ss_dssp EETTEEEEEETTSSHHHHHHHHHHHHTTSGGGEEEEESSGGGHHHHHHSSEEEEET-TS-HHHHHHSSEEESSGTCTHHH
T ss_pred ecccceEEeeCCCCHHHHHHHHhhhcccccceeEEeecccccHhHHhhcCeEEEEc-CCCHHHHHhCCEEecCCCCChHH
Confidence 2 23899999999988766 67999999999999999999999999 99999999999999877667777
Q ss_pred HHH
Q 003189 801 TVA 803 (840)
Q Consensus 801 ~~i 803 (840)
++|
T Consensus 252 ~~i 254 (254)
T PF08282_consen 252 KAI 254 (254)
T ss_dssp HHH
T ss_pred HhC
Confidence 654
No 51
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=98.96 E-value=3.5e-09 Score=109.52 Aligned_cols=128 Identities=21% Similarity=0.314 Sum_probs=96.7
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCC--ccccChhhhcCCHHHHhhhcCCceEEEe-cCcc
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNG--IAIEGPEFREKSDEELSKLIPKIQVMAR-SSPM 736 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~--~~~~g~~~~~~~~~~~~~~~~~~~v~ar-~~P~ 736 (840)
+++|++++.++.|++.|+++.++|+.....+..+.+.+|+..-.. ....+..+. ..+.+. ..+.
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~ 151 (219)
T TIGR00338 85 PLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDAAFANRLEVEDGKLT-------------GLVEGPIVDAS 151 (219)
T ss_pred CcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEeeEEEEECCEEE-------------EEecCcccCCc
Confidence 589999999999999999999999999999999999999864110 000000000 000111 1234
Q ss_pred cHHHHHHHHHHhCC---CEEEEEcCCccCHHHhhhCCccEEecCCCcHHHHhhcCEEeccCCchHHHHH
Q 003189 737 DKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTV 802 (840)
Q Consensus 737 ~K~~~V~~l~~~~g---~~v~~~GDG~ND~~al~~Advgiamg~~g~~~ak~~aDivlldd~f~~i~~~ 802 (840)
.|..+++.+.+++| +.+.++||+.||.++++.|+++++++ +.+..++.||++|.++||..+..+
T Consensus 152 ~k~~~~~~~~~~~~~~~~~~i~iGDs~~Di~aa~~ag~~i~~~--~~~~~~~~a~~~i~~~~~~~~~~~ 218 (219)
T TIGR00338 152 YKGKTLLILLRKEGISPENTVAVGDGANDLSMIKAAGLGIAFN--AKPKLQQKADICINKKDLTDILPL 218 (219)
T ss_pred ccHHHHHHHHHHcCCCHHHEEEEECCHHHHHHHHhCCCeEEeC--CCHHHHHhchhccCCCCHHHHHhh
Confidence 47888888776644 35889999999999999999999985 578889999999999999988764
No 52
>smart00831 Cation_ATPase_N Cation transporter/ATPase, N-terminus. This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+, Na+, Ca2+, Na+/K+, and H+/K+. In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases PUBMED:12480547, PUBMED:12529322.
Probab=98.94 E-value=2.2e-09 Score=87.70 Aligned_cols=62 Identities=31% Similarity=0.487 Sum_probs=56.9
Q ss_pred HhCCCcCCCCCccHHHHHHHHHhcCCCCCCCCCCccHHHHHHHHHhhhHHHHHHHHHHHHHHhh
Q 003189 127 KLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCALVSLVVG 190 (840)
Q Consensus 127 ~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~~f~~~~~~~l~~~~~~il~i~a~is~~~~ 190 (840)
.+++++..||+.++ +++|++.||.|.++.++.+++|+.+|++|+++++++|++++++|++++
T Consensus 2 ~l~~~~~~GLs~~~--v~~r~~~~G~N~l~~~~~~s~~~~~l~~~~~p~~~iL~~~a~is~~~~ 63 (64)
T smart00831 2 RLQTSLESGLSSEE--AARRLERYGPNELPPPKKRSPLLRFLRQFHNPLIYILLAAAVLSALLG 63 (64)
T ss_pred CCCCCcccCCCHHH--HHHHHHHhCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHc
Confidence 36788888999876 999999999999999989999999999999999999999999998764
No 53
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=98.90 E-value=1.2e-08 Score=106.03 Aligned_cols=144 Identities=24% Similarity=0.320 Sum_probs=101.8
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccC----CC-ccccCh---h-hhc-CC-------------
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD----NG-IAIEGP---E-FRE-KS------------- 716 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~----~~-~~~~g~---~-~~~-~~------------- 716 (840)
.+.+.++++|++++++|+.+.++||++...+..+++++|+... ++ .+.... . +.. +.
T Consensus 15 ~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (225)
T TIGR01482 15 AINESALEAIRKAESVGIPVVLVTGNSVQFARALAKLIGTPDPVIAENGGEISYNEGMDDIFLAYLEEEWFLDIVIAKTF 94 (225)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCeEEEecCcEEEeCCCCceEEecccCHHHHHHHHHhccc
Confidence 4778899999999999999999999999999999999996421 11 111100 0 000 00
Q ss_pred -----------------------HHHHhhhcC----CceE-----EEecCc--ccHHHHHHHHHHhCC---CEEEEEcCC
Q 003189 717 -----------------------DEELSKLIP----KIQV-----MARSSP--MDKHTLVKHLRTTLG---EVVAVTGDG 759 (840)
Q Consensus 717 -----------------------~~~~~~~~~----~~~v-----~ar~~P--~~K~~~V~~l~~~~g---~~v~~~GDG 759 (840)
.+.....+. ...+ +....| .+|...++.+.+++| +.++++||+
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~~GD~ 174 (225)
T TIGR01482 95 PFSRLKVQYPRRASLVKMRYGIDVDTVREIIKELGLNLVAVDSGFDIHILPQGVNKGVAVKKLKEKLGIKPGETLVCGDS 174 (225)
T ss_pred chhhhccccccccceEEEeecCCHHHHHHHHHhcCceEEEecCCcEEEEeeCCCCHHHHHHHHHHHhCCCHHHEEEECCC
Confidence 011111110 0111 111223 589999999988766 579999999
Q ss_pred ccCHHHhhhCCccEEecCCCcHHHHhhcCEEeccCCchH----HHHHHH
Q 003189 760 TNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFST----IVTVAK 804 (840)
Q Consensus 760 ~ND~~al~~Advgiamg~~g~~~ak~~aDivlldd~f~~----i~~~i~ 804 (840)
.||.+|++.|++|+||| ++.+.+|+.||.|..+++-.+ +..+++
T Consensus 175 ~NDi~m~~~ag~~vam~-Na~~~~k~~A~~vt~~~~~~G~~~~v~~~l~ 222 (225)
T TIGR01482 175 ENDIDLFEVPGFGVAVA-NAQPELKEWADYVTESPYGEGGAEAIGEILQ 222 (225)
T ss_pred HhhHHHHHhcCceEEcC-ChhHHHHHhcCeecCCCCCCcHHHHHHHHHH
Confidence 99999999999999999 899999999999987777777 555443
No 54
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=98.86 E-value=2.7e-08 Score=106.46 Aligned_cols=68 Identities=28% Similarity=0.387 Sum_probs=59.7
Q ss_pred ccHHHHHHHHHHhCC---CEEEEEcCCccCHHHhhhCCccEEecCCCcHHHHhhcCEEeccCCchHHHHHHH
Q 003189 736 MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAK 804 (840)
Q Consensus 736 ~~K~~~V~~l~~~~g---~~v~~~GDG~ND~~al~~Advgiamg~~g~~~ak~~aDivlldd~f~~i~~~i~ 804 (840)
.+|...++.+.+++| +.++++||+.||.+|++.|++|+||| ++.+..|+.||+|+.+++-.++..+++
T Consensus 198 ~~K~~~l~~l~~~~gi~~~e~i~~GD~~NDi~m~~~ag~~vamg-na~~~lk~~Ad~v~~~n~~dGv~~~l~ 268 (272)
T PRK10530 198 NSKGKRLTQWVEAQGWSMKNVVAFGDNFNDISMLEAAGLGVAMG-NADDAVKARADLVIGDNTTPSIAEFIY 268 (272)
T ss_pred CChHHHHHHHHHHcCCCHHHeEEeCCChhhHHHHHhcCceEEec-CchHHHHHhCCEEEecCCCCcHHHHHH
Confidence 568888888877666 56899999999999999999999999 788888999999998888888888775
No 55
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=98.85 E-value=1.6e-08 Score=103.35 Aligned_cols=114 Identities=27% Similarity=0.338 Sum_probs=90.7
Q ss_pred CCCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCc-------cccChhhhcCCHHHHhhhcCCceEEE
Q 003189 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGI-------AIEGPEFREKSDEELSKLIPKIQVMA 731 (840)
Q Consensus 659 D~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~-------~~~g~~~~~~~~~~~~~~~~~~~v~a 731 (840)
.+++|++.+.++.++++|.+|+++||-...-+..+|+.+|+...-.. +++|. +..
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~~an~l~~~dG~ltG~------------------v~g 137 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVANELEIDDGKLTGR------------------VVG 137 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchheeeEEEEeCCEEece------------------eee
Confidence 68999999999999999999999999999999999999999753111 22222 333
Q ss_pred e-cCcccHHHHHHHHHHhCCC---EEEEEcCCccCHHHhhhCCccEEecCCCcHHHHhhcCEEec
Q 003189 732 R-SSPMDKHTLVKHLRTTLGE---VVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIIL 792 (840)
Q Consensus 732 r-~~P~~K~~~V~~l~~~~g~---~v~~~GDG~ND~~al~~Advgiamg~~g~~~ak~~aDivll 792 (840)
. +..+.|...++.+.+.+|. .+.++|||.||.|||+.|+.+++.+ +.+..+..|+..+-
T Consensus 138 ~~~~~~~K~~~l~~~~~~~g~~~~~~~a~gDs~nDlpml~~ag~~ia~n--~~~~l~~~a~~~~~ 200 (212)
T COG0560 138 PICDGEGKAKALRELAAELGIPLEETVAYGDSANDLPMLEAAGLPIAVN--PKPKLRALADVRIW 200 (212)
T ss_pred eecCcchHHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHhCCCCeEeC--cCHHHHHHHHHhcC
Confidence 3 4458899999888776674 5888999999999999999999985 45555666666553
No 56
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=98.84 E-value=1.9e-08 Score=98.65 Aligned_cols=99 Identities=18% Similarity=0.230 Sum_probs=82.2
Q ss_pred HHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCcccHHHHHHHHH
Q 003189 667 ESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLR 746 (840)
Q Consensus 667 ~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~~V~~l~ 746 (840)
.+|+.|+++|+++.++|+.+...+..+.+.+|+.. .|... ..|...++.+.
T Consensus 41 ~~~~~L~~~Gi~laIiT~k~~~~~~~~l~~lgi~~---------------------------~f~~~--kpkp~~~~~~~ 91 (169)
T TIGR02726 41 MGVIVLQLCGIDVAIITSKKSGAVRHRAEELKIKR---------------------------FHEGI--KKKTEPYAQML 91 (169)
T ss_pred HHHHHHHHCCCEEEEEECCCcHHHHHHHHHCCCcE---------------------------EEecC--CCCHHHHHHHH
Confidence 48999999999999999999999999999999964 33322 24445555555
Q ss_pred HhCC---CEEEEEcCCccCHHHhhhCCccEEecCCCcHHHHhhcCEEeccCC
Q 003189 747 TTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDN 795 (840)
Q Consensus 747 ~~~g---~~v~~~GDG~ND~~al~~Advgiamg~~g~~~ak~~aDivlldd~ 795 (840)
+++| +.++++||+.||.+|++.|++++||+ ++.+..|+.||+|..+.+
T Consensus 92 ~~l~~~~~ev~~iGD~~nDi~~~~~ag~~~am~-nA~~~lk~~A~~I~~~~~ 142 (169)
T TIGR02726 92 EEMNISDAEVCYVGDDLVDLSMMKRVGLAVAVG-DAVADVKEAAAYVTTARG 142 (169)
T ss_pred HHcCcCHHHEEEECCCHHHHHHHHHCCCeEECc-CchHHHHHhCCEEcCCCC
Confidence 5544 57999999999999999999999999 889999999999986444
No 57
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=98.82 E-value=3.4e-08 Score=95.96 Aligned_cols=97 Identities=20% Similarity=0.274 Sum_probs=82.4
Q ss_pred HHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCcccHHHHHHHHHH
Q 003189 668 SVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRT 747 (840)
Q Consensus 668 aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~~V~~l~~ 747 (840)
+|++|++.|+++.++||++...+..+.+.+|+.. .+... ..|...++.+.+
T Consensus 36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~~---------------------------~~~~~--~~k~~~~~~~~~ 86 (154)
T TIGR01670 36 GIRCALKSGIEVAIITGRKAKLVEDRCKTLGITH---------------------------LYQGQ--SNKLIAFSDILE 86 (154)
T ss_pred HHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCCE---------------------------EEecc--cchHHHHHHHHH
Confidence 9999999999999999999999999999999864 23222 456777777655
Q ss_pred hCC---CEEEEEcCCccCHHHhhhCCccEEecCCCcHHHHhhcCEEeccC
Q 003189 748 TLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDD 794 (840)
Q Consensus 748 ~~g---~~v~~~GDG~ND~~al~~Advgiamg~~g~~~ak~~aDivlldd 794 (840)
++| +.+.|+||+.||.+|++.|+++++|. .+.+..+..||+++..+
T Consensus 87 ~~~~~~~~~~~vGDs~~D~~~~~~ag~~~~v~-~~~~~~~~~a~~i~~~~ 135 (154)
T TIGR01670 87 KLALAPENVAYIGDDLIDWPVMEKVGLSVAVA-DAHPLLIPRADYVTRIA 135 (154)
T ss_pred HcCCCHHHEEEECCCHHHHHHHHHCCCeEecC-CcCHHHHHhCCEEecCC
Confidence 544 67999999999999999999999998 78888999999999644
No 58
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=98.76 E-value=7.4e-08 Score=102.18 Aligned_cols=142 Identities=31% Similarity=0.428 Sum_probs=101.4
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccC----CC-cccc--Chhh--------------------
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD----NG-IAIE--GPEF-------------------- 712 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~----~~-~~~~--g~~~-------------------- 712 (840)
++.+++.++|+++++.|+++.++||++...+..+.+++|+... ++ .++. |+.+
T Consensus 16 ~i~~~~~~~i~~l~~~G~~~~iaTGR~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~~~~i~~~~i~~~~~~~i~~~~~~~ 95 (256)
T TIGR00099 16 TISPSTKEALAKLREKGIKVVLATGRPYKEVKNILKELGLDTPFITANGAAVIDDQGEILYKKPLDLDLVEEILNFLKKH 95 (256)
T ss_pred ccCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCCCCEEEcCCcEEECCCCCEEeecCCCHHHHHHHHHHHHHc
Confidence 5788999999999999999999999999999999999987521 11 0000 0000
Q ss_pred ----------------------h--------------c---------------CCHH---HHhhhcC------CceE---
Q 003189 713 ----------------------R--------------E---------------KSDE---ELSKLIP------KIQV--- 729 (840)
Q Consensus 713 ----------------------~--------------~---------------~~~~---~~~~~~~------~~~v--- 729 (840)
. . ..++ ++.+.+. .+.+
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 175 (256)
T TIGR00099 96 GLDVILYGDDSIYASKNDPEYFTIFKKFLGEPKLEVVDIQYLPDDILKILLLFLDPEDLDLLIEALNKLELEENVSVVSS 175 (256)
T ss_pred CcEEEEEeCCeEEecCCCcchhHHHHHhccCCcceeccchhhhcccceEEEEECCHHHHHHHHHHhhhhhhcCCEEEEEe
Confidence 0 0 0000 1111111 1211
Q ss_pred ---EEecCc--ccHHHHHHHHHHhCC---CEEEEEcCCccCHHHhhhCCccEEecCCCcHHHHhhcCEEeccCCchHHHH
Q 003189 730 ---MARSSP--MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVT 801 (840)
Q Consensus 730 ---~ar~~P--~~K~~~V~~l~~~~g---~~v~~~GDG~ND~~al~~Advgiamg~~g~~~ak~~aDivlldd~f~~i~~ 801 (840)
+-...| .+|...++.+.+.+| +.++++||+.||.+|++.|++|+||| ++.+..|+.||+++.+++-.+|..
T Consensus 176 ~~~~leI~~~~~~K~~~i~~~~~~~~~~~~~~~~~GD~~nD~~m~~~~~~~~a~~-na~~~~k~~a~~~~~~n~~dGV~~ 254 (256)
T TIGR00099 176 GPYSIEITAKGVSKGSALQSLAEALGISLEDVIAFGDGMNDIEMLEAAGYGVAMG-NADEELKALADYVTDSNNEDGVAL 254 (256)
T ss_pred cCceEEecCCCCChHHHHHHHHHHcCCCHHHEEEeCCcHHhHHHHHhCCceeEec-CchHHHHHhCCEEecCCCCcchhh
Confidence 112223 579999999988765 57999999999999999999999999 889999999999998877777665
Q ss_pred H
Q 003189 802 V 802 (840)
Q Consensus 802 ~ 802 (840)
+
T Consensus 255 ~ 255 (256)
T TIGR00099 255 A 255 (256)
T ss_pred h
Confidence 4
No 59
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=98.71 E-value=7.4e-08 Score=96.50 Aligned_cols=109 Identities=18% Similarity=0.229 Sum_probs=88.4
Q ss_pred HHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCcccHHHHHHHHH
Q 003189 667 ESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLR 746 (840)
Q Consensus 667 ~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~~V~~l~ 746 (840)
.+|+.|++.|+++.++||.+...+..+++++|+.. +|. ...+|...++.+.
T Consensus 55 ~~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~lgl~~---------------------------~f~--g~~~k~~~l~~~~ 105 (183)
T PRK09484 55 YGIRCLLTSGIEVAIITGRKSKLVEDRMTTLGITH---------------------------LYQ--GQSNKLIAFSDLL 105 (183)
T ss_pred HHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCce---------------------------eec--CCCcHHHHHHHHH
Confidence 69999999999999999999999999999999863 333 2356777777776
Q ss_pred HhCC---CEEEEEcCCccCHHHhhhCCccEEecCCCcHHHHhhcCEEeccC----CchHHHHHHHH
Q 003189 747 TTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDD----NFSTIVTVAKW 805 (840)
Q Consensus 747 ~~~g---~~v~~~GDG~ND~~al~~Advgiamg~~g~~~ak~~aDivlldd----~f~~i~~~i~~ 805 (840)
+++| +.++|+||+.||.+|++.|+++++++ .+.+..+..||+++-.. .+..+.+.+..
T Consensus 106 ~~~gl~~~ev~~VGDs~~D~~~a~~aG~~~~v~-~~~~~~~~~a~~v~~~~~g~g~~~el~~~i~~ 170 (183)
T PRK09484 106 EKLAIAPEQVAYIGDDLIDWPVMEKVGLSVAVA-DAHPLLLPRADYVTRIAGGRGAVREVCDLLLL 170 (183)
T ss_pred HHhCCCHHHEEEECCCHHHHHHHHHCCCeEecC-ChhHHHHHhCCEEecCCCCCCHHHHHHHHHHH
Confidence 6555 57999999999999999999999998 78888899999998532 24445555443
No 60
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=98.62 E-value=3.2e-07 Score=97.34 Aligned_cols=143 Identities=17% Similarity=0.130 Sum_probs=97.8
Q ss_pred CCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCcc----CCC-ccccCh--h------hh--cCCHHH------
Q 003189 661 MRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILT----DNG-IAIEGP--E------FR--EKSDEE------ 719 (840)
Q Consensus 661 lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~----~~~-~~~~g~--~------~~--~~~~~~------ 719 (840)
..+.+.++|+.|+++|++++++||+....+..+.+++|+.. .|+ .++... . +. .++.+.
T Consensus 17 ~~~~~~~~i~~l~~~g~~~~~~TgR~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~~~~~~~~~~~~~~~i~~~~~~~il~ 96 (256)
T TIGR01486 17 DWGPAKEVLERLQELGIPVIPCTSKTAAEVEYLRKELGLEDPFIVENGGAIYGPRGWFTEPEYPVIALGIPYEKIRARLE 96 (256)
T ss_pred CchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCcEEEcCCeEEEeCCCcccCCCeEEEEcCCCHHHHHHHHH
Confidence 44568999999999999999999999999999999999752 122 122110 0 00 011000
Q ss_pred -----------------------------------------------------HhhhcC--CceEE-----EecC--ccc
Q 003189 720 -----------------------------------------------------LSKLIP--KIQVM-----ARSS--PMD 737 (840)
Q Consensus 720 -----------------------------------------------------~~~~~~--~~~v~-----ar~~--P~~ 737 (840)
+.+.+. .+.+. -... -..
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ei~~~~~~ 176 (256)
T TIGR01486 97 ELSEELGFKFRGLGDLTDAEIAELTGLSRELAALAQRREYSETILWSEERRERFTEALVELGLEVTHGNRFYHVLGAGSD 176 (256)
T ss_pred HHHHHhCCCccchhhCCHHHHHHHhCcCHHHHHHHhhCccCCceecChHHHHHHHHHHHHcCCEEEeCCceEEEecCCCC
Confidence 000000 01111 0111 267
Q ss_pred HHHHHHHHHHhCC-----CEEEEEcCCccCHHHhhhCCccEEecCCCc---HHHHhh--c-CEEeccCCchHHHHHHH
Q 003189 738 KHTLVKHLRTTLG-----EVVAVTGDGTNDAPALHEADIGLAMGIAGT---EVAKES--A-DVIILDDNFSTIVTVAK 804 (840)
Q Consensus 738 K~~~V~~l~~~~g-----~~v~~~GDG~ND~~al~~Advgiamg~~g~---~~ak~~--a-Divlldd~f~~i~~~i~ 804 (840)
|...++.+.+++| +.+.++||+.||.+||+.|++|+||| ++. +..|+. | ++|..+++-.++..+++
T Consensus 177 Kg~ai~~l~~~~~i~~~~~~~~a~GD~~ND~~Ml~~ag~~vam~-Na~~~~~~lk~~~~a~~~vt~~~~~dGva~~l~ 253 (256)
T TIGR01486 177 KGKAANALKQFYNQPGGAIKVVGLGDSPNDLPLLEVVDLAVVVP-GPNGPNVSLKPGDPGSFLLTPAPGPEGWREALE 253 (256)
T ss_pred HHHHHHHHHHHHhhcCCCceEEEEcCCHhhHHHHHHCCEEEEeC-CCCCCccccCccCCCcEEEcCCCCcHHHHHHHH
Confidence 8888888877754 45999999999999999999999999 776 457876 4 58887888888888775
No 61
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=98.58 E-value=4.2e-07 Score=97.26 Aligned_cols=145 Identities=15% Similarity=0.098 Sum_probs=97.1
Q ss_pred CCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCcc-----CCC-ccccChh--------h-h-cCCHHHH----
Q 003189 661 MRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILT-----DNG-IAIEGPE--------F-R-EKSDEEL---- 720 (840)
Q Consensus 661 lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~-----~~~-~~~~g~~--------~-~-~~~~~~~---- 720 (840)
+-+.++++|++|+++|+++++.||+....+..+++++|+.. .|+ .++.... . . .++.+..
T Consensus 25 i~~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~~~~l~~~~~~~I~~NGa~I~~~~~~~~~~~~~~~~~~l~~~~~~~i~ 104 (271)
T PRK03669 25 DWQPAAPWLTRLREAQVPVILCSSKTAAEMLPLQQTLGLQGLPLIAENGAVIQLDEQWQDHPDFPRIISGISHGEIRQVL 104 (271)
T ss_pred CcHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHhCCCCCcEEEeCCCEEEecCcccCCCCceEeecCCCHHHHHHHH
Confidence 45678999999999999999999999999999999999842 122 2221100 0 0 0111000
Q ss_pred ---------------------------------------------------------hhhcC--CceE-----EEecCc-
Q 003189 721 ---------------------------------------------------------SKLIP--KIQV-----MARSSP- 735 (840)
Q Consensus 721 ---------------------------------------------------------~~~~~--~~~v-----~ar~~P- 735 (840)
.+.+. .+.+ +-...|
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iEi~~~ 184 (271)
T PRK03669 105 NTLREKEGFKFTTFDDVDDATIAEWTGLSRSQAALARLHEASVTLIWRDSDERMAQFTARLAELGLQFVQGARFWHVLDA 184 (271)
T ss_pred HHHHHhcCCceeecccCCHHHHHHHhCCCHHHHHHHhccccCceeEecCCHHHHHHHHHHHHHCCCEEEecCeeEEEecC
Confidence 00000 1111 111223
Q ss_pred -ccHHHHHHHHHHhCC------CEEEEEcCCccCHHHhhhCCccEEecCCCcHH-----HHhhcCEEeccCCchHHHHHH
Q 003189 736 -MDKHTLVKHLRTTLG------EVVAVTGDGTNDAPALHEADIGLAMGIAGTEV-----AKESADVIILDDNFSTIVTVA 803 (840)
Q Consensus 736 -~~K~~~V~~l~~~~g------~~v~~~GDG~ND~~al~~Advgiamg~~g~~~-----ak~~aDivlldd~f~~i~~~i 803 (840)
.+|...++.|.+.+| +.|+++||+.||.+||+.|++|+|||....+. .+..+|++....+-.++.+++
T Consensus 185 g~sKg~al~~l~~~lgi~~~~~~~viafGDs~NDi~Ml~~ag~gvAM~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~l 264 (271)
T PRK03669 185 SAGKDQAANWLIATYQQLSGTRPTTLGLGDGPNDAPLLDVMDYAVVVKGLNREGVHLQDDDPARVYRTQREGPEGWREGL 264 (271)
T ss_pred CCCHHHHHHHHHHHHHhhcCCCceEEEEcCCHHHHHHHHhCCEEEEecCCCCCCcccccccCCceEeccCCCcHHHHHHH
Confidence 688888888877655 46899999999999999999999999333231 345789988877777888776
Q ss_pred HH
Q 003189 804 KW 805 (840)
Q Consensus 804 ~~ 805 (840)
++
T Consensus 265 ~~ 266 (271)
T PRK03669 265 DH 266 (271)
T ss_pred HH
Confidence 53
No 62
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=98.56 E-value=4.3e-07 Score=92.81 Aligned_cols=124 Identities=22% Similarity=0.296 Sum_probs=90.7
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccC--CCccccChhhhcCCHHHHhhhcCCceEEE--ecCc
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD--NGIAIEGPEFREKSDEELSKLIPKIQVMA--RSSP 735 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~--~~~~~~g~~~~~~~~~~~~~~~~~~~v~a--r~~P 735 (840)
++.|++.+.++.|+++ +++.++|+.....+..+.+++|+... +.....+.. .+.. -..|
T Consensus 68 ~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~----------------~i~~~~~~~p 130 (205)
T PRK13582 68 DPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQLGWPTLFCHSLEVDEDG----------------MITGYDLRQP 130 (205)
T ss_pred CCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHHcCCchhhcceEEECCCC----------------eEECcccccc
Confidence 4689999999999999 99999999999999999999998531 000000000 0111 1247
Q ss_pred ccHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEEecCCCcHHHHhhcCEEeccCCchHHHHHH
Q 003189 736 MDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVA 803 (840)
Q Consensus 736 ~~K~~~V~~l~~~~g~~v~~~GDG~ND~~al~~Advgiamg~~g~~~ak~~aDivlldd~f~~i~~~i 803 (840)
..|...++.++.. ++.+.|+|||.||.+|.+.|++|+..+ ...+.....++..+. +++..+...+
T Consensus 131 ~~k~~~l~~~~~~-~~~~v~iGDs~~D~~~~~aa~~~v~~~-~~~~~~~~~~~~~~~-~~~~el~~~l 195 (205)
T PRK13582 131 DGKRQAVKALKSL-GYRVIAAGDSYNDTTMLGEADAGILFR-PPANVIAEFPQFPAV-HTYDELLAAI 195 (205)
T ss_pred chHHHHHHHHHHh-CCeEEEEeCCHHHHHHHHhCCCCEEEC-CCHHHHHhCCccccc-CCHHHHHHHH
Confidence 8899999999877 888999999999999999999999887 444444455666332 3477666554
No 63
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=98.54 E-value=4e-07 Score=92.60 Aligned_cols=118 Identities=22% Similarity=0.249 Sum_probs=83.8
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCcccHH
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~ 739 (840)
+++|++.+.++.|++.|+++.++|+-....+..+++.+|+..-....+...+-.. .-|. .+....|..|.
T Consensus 80 ~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~~~~~~~~~~~~g~--------~~p~--~~~~~~~~~k~ 149 (201)
T TIGR01491 80 SLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDYVYSNELVFDEKGF--------IQPD--GIVRVTFDNKG 149 (201)
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCeEEEEEEEEcCCCe--------Eecc--eeeEEccccHH
Confidence 5899999999999999999999999999999999999997531100110000000 0011 11123466788
Q ss_pred HHHHHHHHhCC---CEEEEEcCCccCHHHhhhCCccEEecCCCcHHHHhhcC
Q 003189 740 TLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESAD 788 (840)
Q Consensus 740 ~~V~~l~~~~g---~~v~~~GDG~ND~~al~~Advgiamg~~g~~~ak~~aD 788 (840)
..++.+.+++| +.+.++||+.||.+|++.|+++++++ .+....+.++|
T Consensus 150 ~~~~~~~~~~~~~~~~~i~iGDs~~D~~~a~~ag~~~a~~-~~~~~~~~a~~ 200 (201)
T TIGR01491 150 EAVERLKRELNPSLTETVAVGDSKNDLPMFEVADISISLG-DEGHADYLAKD 200 (201)
T ss_pred HHHHHHHHHhCCCHHHEEEEcCCHhHHHHHHhcCCeEEEC-CCccchhhccc
Confidence 88888766534 46899999999999999999999997 44444555554
No 64
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=98.52 E-value=3e-07 Score=85.61 Aligned_cols=119 Identities=19% Similarity=0.281 Sum_probs=97.0
Q ss_pred HHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCcccHHHHHHHHH
Q 003189 667 ESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLR 746 (840)
Q Consensus 667 ~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~~V~~l~ 746 (840)
-.|+.+.+.||++.++||.+..-++.=|+++||.. +|- --.+|....+.|.
T Consensus 42 ~Gik~l~~~Gi~vAIITGr~s~ive~Ra~~LGI~~---------------------------~~q--G~~dK~~a~~~L~ 92 (170)
T COG1778 42 HGIKLLLKSGIKVAIITGRDSPIVEKRAKDLGIKH---------------------------LYQ--GISDKLAAFEELL 92 (170)
T ss_pred HHHHHHHHcCCeEEEEeCCCCHHHHHHHHHcCCce---------------------------eee--chHhHHHHHHHHH
Confidence 37899999999999999999999999999999963 332 2368999998887
Q ss_pred HhCC---CEEEEEcCCccCHHHhhhCCccEEecCCCcHHHHhhcCEEeccC----CchHHHHHHHHHHHHHHHHHH
Q 003189 747 TTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDD----NFSTIVTVAKWGRSVYINIQK 815 (840)
Q Consensus 747 ~~~g---~~v~~~GDG~ND~~al~~Advgiamg~~g~~~ak~~aDivlldd----~f~~i~~~i~~gR~~~~~i~k 815 (840)
++++ +.|+++||..||.|+|+..++++|+. .+.+..++.||+|+-.. -+..+.++|..++..++-.++
T Consensus 93 ~~~~l~~e~~ayiGDD~~Dlpvm~~vGls~a~~-dAh~~v~~~a~~Vt~~~GG~GAvREv~dlil~aq~~~d~~~~ 167 (170)
T COG1778 93 KKLNLDPEEVAYVGDDLVDLPVMEKVGLSVAVA-DAHPLLKQRADYVTSKKGGEGAVREVCDLILQAQGKLDEALG 167 (170)
T ss_pred HHhCCCHHHhhhhcCccccHHHHHHcCCccccc-ccCHHHHHhhHhhhhccCcchHHHHHHHHHHHccCcHHHHHh
Confidence 7755 68999999999999999999999998 88888999999998644 244555666666665554443
No 65
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=98.47 E-value=1.2e-06 Score=93.92 Aligned_cols=67 Identities=22% Similarity=0.213 Sum_probs=54.2
Q ss_pred cHHHHHHHHHHhCC----CEEEEEcCCccCHHHhhhCCccEEecCCCcHHHH----hhc-CEEe--ccCCchHHHHHHH
Q 003189 737 DKHTLVKHLRTTLG----EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAK----ESA-DVII--LDDNFSTIVTVAK 804 (840)
Q Consensus 737 ~K~~~V~~l~~~~g----~~v~~~GDG~ND~~al~~Advgiamg~~g~~~ak----~~a-Divl--ldd~f~~i~~~i~ 804 (840)
+|...++.+.+.+| +.|+++||+.||.+|++.|++|+||+ ++.+..| ..| +.+. ...+=.++..+++
T Consensus 190 ~Kg~al~~l~~~~~i~~~~~v~~~GDs~NDi~m~~~ag~~vam~-NA~~~~k~~~~~~a~~~v~~~~~~~~~Gv~~~l~ 267 (273)
T PRK00192 190 DKGKAVRWLKELYRRQDGVETIALGDSPNDLPMLEAADIAVVVP-GPDGPNPPLLPGIADGEFILASAPGPEGWAEAIN 267 (273)
T ss_pred CHHHHHHHHHHHHhccCCceEEEEcCChhhHHHHHhCCeeEEeC-CCCCCCcccCccccCCceEEecCCCcHHHHHHHH
Confidence 78888888876544 78999999999999999999999999 9998888 666 6777 3444566766654
No 66
>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=98.43 E-value=4.3e-07 Score=87.28 Aligned_cols=105 Identities=24% Similarity=0.387 Sum_probs=77.8
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCcc----c--cChhhhcCCHHHHhhhcCCceEEEec
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIA----I--EGPEFREKSDEELSKLIPKIQVMARS 733 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~----~--~g~~~~~~~~~~~~~~~~~~~v~ar~ 733 (840)
.+-|++++.++.|++.|.+|.++||--..-+..+|.++||+..+..+ . .|+ +..... --.-+
T Consensus 88 ~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~~n~yAN~l~fd~~Gk-~~gfd~-----------~~pts 155 (227)
T KOG1615|consen 88 TLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPKSNIYANELLFDKDGK-YLGFDT-----------NEPTS 155 (227)
T ss_pred ccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcHhhhhhheeeeccCCc-cccccc-----------CCccc
Confidence 46799999999999999999999999999999999999997532100 0 010 000000 00012
Q ss_pred CcccHHHHHHHHHHhCC-CEEEEEcCCccCHHHhhhCCccEEec
Q 003189 734 SPMDKHTLVKHLRTTLG-EVVAVTGDGTNDAPALHEADIGLAMG 776 (840)
Q Consensus 734 ~P~~K~~~V~~l~~~~g-~~v~~~GDG~ND~~al~~Advgiamg 776 (840)
...-|...++.+++.+. ..++|+|||.||.+|+..||.=++.|
T Consensus 156 dsggKa~~i~~lrk~~~~~~~~mvGDGatDlea~~pa~afi~~~ 199 (227)
T KOG1615|consen 156 DSGGKAEVIALLRKNYNYKTIVMVGDGATDLEAMPPADAFIGFG 199 (227)
T ss_pred cCCccHHHHHHHHhCCChheeEEecCCccccccCCchhhhhccC
Confidence 34689999999988643 68999999999999999988766655
No 67
>PLN02954 phosphoserine phosphatase
Probab=98.36 E-value=4.2e-06 Score=86.81 Aligned_cols=125 Identities=26% Similarity=0.357 Sum_probs=86.7
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCC----ccccChhhhcCCHHHHhhhcCCceEEEe---
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNG----IAIEGPEFREKSDEELSKLIPKIQVMAR--- 732 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~----~~~~g~~~~~~~~~~~~~~~~~~~v~ar--- 732 (840)
+++|++.+.++.|++.|+++.++||.....+..+++.+|+...+- ...... -.+.+.
T Consensus 84 ~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~~~~~~~~~~~~~~~----------------g~~~g~~~~ 147 (224)
T PLN02954 84 RLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIPPENIFANQILFGDS----------------GEYAGFDEN 147 (224)
T ss_pred CCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCChhhEEEeEEEEcCC----------------CcEECccCC
Confidence 378999999999999999999999999999999999999963110 000000 001111
Q ss_pred ---cCcccHHHHHHHHHHhCC-CEEEEEcCCccCHHHhhh--CCccEEecCCC-cHHHHhhcCEEeccCCchHHHHH
Q 003189 733 ---SSPMDKHTLVKHLRTTLG-EVVAVTGDGTNDAPALHE--ADIGLAMGIAG-TEVAKESADVIILDDNFSTIVTV 802 (840)
Q Consensus 733 ---~~P~~K~~~V~~l~~~~g-~~v~~~GDG~ND~~al~~--Advgiamg~~g-~~~ak~~aDivlldd~f~~i~~~ 802 (840)
+.+..|...++.+.+++| +.+.|+||+.||..|.+. ++++++.|... .+.....+|+++. ++..+.+.
T Consensus 148 ~~~~~~~~K~~~i~~~~~~~~~~~~i~iGDs~~Di~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~i~--~~~el~~~ 222 (224)
T PLN02954 148 EPTSRSGGKAEAVQHIKKKHGYKTMVMIGDGATDLEARKPGGADLFIGYGGVQVREAVAAKADWFVT--DFQDLIEV 222 (224)
T ss_pred CcccCCccHHHHHHHHHHHcCCCceEEEeCCHHHHHhhhcCCCCEEEecCCCccCHHHHhcCCEEEC--CHHHHHHh
Confidence 112458888888877645 568899999999999888 56666665221 2334556899984 47766553
No 68
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=98.33 E-value=3.5e-06 Score=86.79 Aligned_cols=134 Identities=16% Similarity=0.154 Sum_probs=88.6
Q ss_pred CCCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccC---CCccccChhhhcCCHHHHhhhcCCceEE--Eec
Q 003189 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD---NGIAIEGPEFREKSDEELSKLIPKIQVM--ARS 733 (840)
Q Consensus 659 D~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~---~~~~~~g~~~~~~~~~~~~~~~~~~~v~--ar~ 733 (840)
-+++|++.+.++.|++.|+++.++||.....+..+.+.++.... +.....|..+... .|.-..+ ...
T Consensus 69 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~~i~~n~~~~~~~~~~~~--------~p~~~~~~~~~~ 140 (214)
T TIGR03333 69 AEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEKDRIYCNEADFSNEYIHID--------WPHPCDGTCQNQ 140 (214)
T ss_pred CcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCcccEEeceeEeeCCeeEEe--------CCCCCccccccC
Confidence 47899999999999999999999999999999999888754321 1122223222110 0100000 001
Q ss_pred CcccHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEEecCCCcHHHHhh--cCEEeccCCchHHHHHHH
Q 003189 734 SPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKES--ADVIILDDNFSTIVTVAK 804 (840)
Q Consensus 734 ~P~~K~~~V~~l~~~~g~~v~~~GDG~ND~~al~~Advgiamg~~g~~~ak~~--aDivlldd~f~~i~~~i~ 804 (840)
....|..+++.++.. .+.+.|+|||.||.+|++.||+.+|-+ .-.+-.++. +.+.+ ++|..|...++
T Consensus 141 cg~~K~~~l~~~~~~-~~~~i~iGDg~~D~~~a~~Ad~~~ar~-~l~~~~~~~~~~~~~~--~~f~di~~~l~ 209 (214)
T TIGR03333 141 CGCCKPSLIRKLSEP-NDYHIVIGDSVTDVEAAKQSDLCFARD-YLLNECEELGLNHAPF--QDFYDVRKELE 209 (214)
T ss_pred CCCCHHHHHHHHhhc-CCcEEEEeCCHHHHHHHHhCCeeEehH-HHHHHHHHcCCCccCc--CCHHHHHHHHH
Confidence 135799999998876 677899999999999999999988754 211211211 22222 45888876654
No 69
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=98.32 E-value=3.7e-06 Score=87.99 Aligned_cols=69 Identities=19% Similarity=0.214 Sum_probs=58.2
Q ss_pred ccHHHHHHHHHHhCC---CEEEEEcCCccCHHHhhhCCccEEecCCCcHHHHhhcC----EEeccCCchHHHHHHHH
Q 003189 736 MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESAD----VIILDDNFSTIVTVAKW 805 (840)
Q Consensus 736 ~~K~~~V~~l~~~~g---~~v~~~GDG~ND~~al~~Advgiamg~~g~~~ak~~aD----ivlldd~f~~i~~~i~~ 805 (840)
..|...++.|.+++| +.++++||+.||.+||+.+++|++|+ ++.+..|+.|| +|.-.++=.++.+++.+
T Consensus 158 ~~K~~al~~l~~~~g~~~~~~i~~GD~~nD~~ml~~~~~~iav~-na~~~~k~~a~~~~~~v~~~~~~~Gv~~~i~~ 233 (236)
T TIGR02471 158 ASKGLALRYLSYRWGLPLEQILVAGDSGNDEEMLRGLTLGVVVG-NHDPELEGLRHQQRIYFANNPHAFGILEGINH 233 (236)
T ss_pred CChHHHHHHHHHHhCCCHHHEEEEcCCccHHHHHcCCCcEEEEc-CCcHHHHHhhcCCcEEEcCCCChhHHHHHHHh
Confidence 489999999988766 35888999999999999999999999 89999999999 77666566677777653
No 70
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=98.21 E-value=3.3e-06 Score=85.13 Aligned_cols=92 Identities=29% Similarity=0.320 Sum_probs=70.2
Q ss_pred cchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCcc-c--HH
Q 003189 663 PGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPM-D--KH 739 (840)
Q Consensus 663 ~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~-~--K~ 739 (840)
|++.+.|+.++++|++++++||+....+.++++.+|+...+....+- +.. .+....++.+|. + |.
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~~~v~~~~~--~~~----------~~~~~~~~~~~~~~~~K~ 159 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDDDNVIGNEL--FDN----------GGGIFTGRITGSNCGGKA 159 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSEGGEEEEEE--ECT----------TCCEEEEEEEEEEESHHH
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEEEEEee--eec----------ccceeeeeECCCCCCcHH
Confidence 88889999999999999999999999999999999997521111100 000 012355666665 4 99
Q ss_pred HHHHHH------HHhCCCEEEEEcCCccCHHHhh
Q 003189 740 TLVKHL------RTTLGEVVAVTGDGTNDAPALH 767 (840)
Q Consensus 740 ~~V~~l------~~~~g~~v~~~GDG~ND~~al~ 767 (840)
..++.+ +.. .+.+.++|||.||.||||
T Consensus 160 ~~l~~~~~~~~~~~~-~~~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 160 EALKELYIRDEEDID-PDRVIAIGDSINDLPMLR 192 (192)
T ss_dssp HHHHHHHHHHHHTHT-CCEEEEEESSGGGHHHHH
T ss_pred HHHHHHHHHhhcCCC-CCeEEEEECCHHHHHHhC
Confidence 999999 223 588999999999999986
No 71
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=98.18 E-value=8.5e-06 Score=84.28 Aligned_cols=128 Identities=24% Similarity=0.369 Sum_probs=92.0
Q ss_pred cCCCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCccc
Q 003189 658 KDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMD 737 (840)
Q Consensus 658 ~D~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~ 737 (840)
...+-|++++++..|+++|++..++|+++...+..+.+..|+......++.+...... .-.|..
T Consensus 87 ~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~~F~~i~g~~~~~~~----------------KP~P~~ 150 (220)
T COG0546 87 ESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLADYFDVIVGGDDVPPP----------------KPDPEP 150 (220)
T ss_pred cCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCccccceEEcCCCCCCC----------------CcCHHH
Confidence 4567899999999999999999999999999999999999997643333222221100 012333
Q ss_pred HHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCC---ccEEecCC-CcHHHHhhcCEEeccCCchHHHHHHH
Q 003189 738 KHTLVKHLRTTLGEVVAVTGDGTNDAPALHEAD---IGLAMGIA-GTEVAKESADVIILDDNFSTIVTVAK 804 (840)
Q Consensus 738 K~~~V~~l~~~~g~~v~~~GDG~ND~~al~~Ad---vgiamg~~-g~~~ak~~aDivlldd~f~~i~~~i~ 804 (840)
...+.+.+... .+.++||||..+|+.|-++|+ ||+..|.+ ........+|+++- ++..+...+.
T Consensus 151 l~~~~~~~~~~-~~~~l~VGDs~~Di~aA~~Ag~~~v~v~~g~~~~~~l~~~~~d~vi~--~~~el~~~l~ 218 (220)
T COG0546 151 LLLLLEKLGLD-PEEALMVGDSLNDILAAKAAGVPAVGVTWGYNSREELAQAGADVVID--SLAELLALLA 218 (220)
T ss_pred HHHHHHHhCCC-hhheEEECCCHHHHHHHHHcCCCEEEEECCCCCCcchhhcCCCEEEC--CHHHHHHHHh
Confidence 33444444322 246999999999999999998 77888843 45667777999984 4877776553
No 72
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=98.15 E-value=1.9e-05 Score=83.32 Aligned_cols=146 Identities=17% Similarity=0.185 Sum_probs=97.5
Q ss_pred cCCCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccC------CCc-cc-cChh------------------
Q 003189 658 KDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD------NGI-AI-EGPE------------------ 711 (840)
Q Consensus 658 ~D~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~------~~~-~~-~g~~------------------ 711 (840)
..+..|...++++++++.|+.++++||.....++.+.+++++..+ ++- ++ .|..
T Consensus 19 ~~~~~~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~~~~~~p~~~I~~NGa~I~~~~~~~~~~~~~~~~~~~~~~~~ 98 (249)
T TIGR01485 19 DNQALLRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQKPLLTPDIWVTSVGSEIYYGGAEVPDQHWAEYLSEKWQRDI 98 (249)
T ss_pred ChHHHHHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhcCCCCCCCEEEEcCCceEEeCCCCcCCHHHHHHHhcccCHHH
Confidence 456779999999999999999999999999999999999997643 221 11 1100
Q ss_pred hh-------cC-----------------CHH-------HHhhhcC----CceE-EE-----ecCc--ccHHHHHHHHHHh
Q 003189 712 FR-------EK-----------------SDE-------ELSKLIP----KIQV-MA-----RSSP--MDKHTLVKHLRTT 748 (840)
Q Consensus 712 ~~-------~~-----------------~~~-------~~~~~~~----~~~v-~a-----r~~P--~~K~~~V~~l~~~ 748 (840)
+. .+ ..+ ++.+.+. ++.+ .+ ...| ..|...++.+.++
T Consensus 99 ~~~~~~~~~~l~~~~~~~~~~~k~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~ldi~~~~~~K~~al~~l~~~ 178 (249)
T TIGR01485 99 VVAITDKFEELKPQPDLEQRPHKVSFFLDPEAAPEVIKQLTEMLKETGLDVKLIYSSGKDLDILPQGSGKGQALQYLLQK 178 (249)
T ss_pred HHHHHhcCcccccCCccccCCeeEEEEechhhhhHHHHHHHHHHHhcCCCEEEEEECCceEEEEeCCCChHHHHHHHHHH
Confidence 00 00 000 0111111 1211 11 2233 6899999999887
Q ss_pred CC---CEEEEEcCCccCHHHhhh-CCccEEecCCCcHHHHhhcC-------EEeccCCchHHHHHHH
Q 003189 749 LG---EVVAVTGDGTNDAPALHE-ADIGLAMGIAGTEVAKESAD-------VIILDDNFSTIVTVAK 804 (840)
Q Consensus 749 ~g---~~v~~~GDG~ND~~al~~-Advgiamg~~g~~~ak~~aD-------ivlldd~f~~i~~~i~ 804 (840)
+| +.|+++||+.||.+|++. ++.|++|+ ++.+..|+.++ ++.-.-.-+++.++++
T Consensus 179 ~~i~~~~~i~~GD~~ND~~ml~~~~~~~va~~-na~~~~k~~~~~~~~~~~~~~~~~~~~Gi~e~l~ 244 (249)
T TIGR01485 179 LAMEPSQTLVCGDSGNDIELFEIGSVRGVIVS-NAQEELLQWYDENAKDKIYHASERCAGGIIEAIA 244 (249)
T ss_pred cCCCccCEEEEECChhHHHHHHccCCcEEEEC-CCHHHHHHHHHhcccCcEEEecCCCcHHHHHHHH
Confidence 66 679999999999999998 67999999 88888786543 4333333455655554
No 73
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=98.15 E-value=6.3e-06 Score=81.95 Aligned_cols=98 Identities=24% Similarity=0.331 Sum_probs=70.8
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccC--CCccc--cChhhhcCCHHHHhhhcCCceEEEecCc
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD--NGIAI--EGPEFREKSDEELSKLIPKIQVMARSSP 735 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~--~~~~~--~g~~~~~~~~~~~~~~~~~~~v~ar~~P 735 (840)
+++|++.+.++.|++.|+++.++||.....+..+++.+|+..- +.... +| .+. .+...-....+
T Consensus 73 ~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~~~~~~~~~~~~~g-~~~-----------g~~~~~~~~~~ 140 (177)
T TIGR01488 73 ALRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGIDDVFANRLEFDDNG-LLT-----------GPIEGQVNPEG 140 (177)
T ss_pred CcCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCchheeeeEEECCCC-EEe-----------CccCCcccCCc
Confidence 3689999999999999999999999999999999999998631 00101 01 000 00000012446
Q ss_pred ccHHHHHHHHHHhCC---CEEEEEcCCccCHHHhhhC
Q 003189 736 MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEA 769 (840)
Q Consensus 736 ~~K~~~V~~l~~~~g---~~v~~~GDG~ND~~al~~A 769 (840)
..|...++.+++..| +.+.++|||.||.+|++.|
T Consensus 141 ~~K~~~l~~~~~~~~~~~~~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 141 ECKGKVLKELLEESKITLKKIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred chHHHHHHHHHHHhCCCHHHEEEEeCCHHHHHHHhcC
Confidence 889999998776533 4689999999999999875
No 74
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=98.13 E-value=9.3e-06 Score=82.70 Aligned_cols=107 Identities=16% Similarity=0.158 Sum_probs=78.1
Q ss_pred cCCCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCC--ccccChhhhcCCHHHHhhhcCCceEE-EecC
Q 003189 658 KDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNG--IAIEGPEFREKSDEELSKLIPKIQVM-ARSS 734 (840)
Q Consensus 658 ~D~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~--~~~~g~~~~~~~~~~~~~~~~~~~v~-ar~~ 734 (840)
..+++|++.+.++.+++.|+++.++|+.....+..+++.+|+..--. +...... .+. .+ +. -.+.
T Consensus 85 ~~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~~~~~~l~~~~~g-------~~~---g~--~~~~~~~ 152 (202)
T TIGR01490 85 ESILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDNAIGTRLEESEDG-------IYT---GN--IDGNNCK 152 (202)
T ss_pred HHhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcceEecceEEcCCC-------EEe---CC--ccCCCCC
Confidence 45689999999999999999999999999999999999999853100 1110000 000 00 00 1134
Q ss_pred cccHHHHHHHHHHhCC---CEEEEEcCCccCHHHhhhCCccEEec
Q 003189 735 PMDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMG 776 (840)
Q Consensus 735 P~~K~~~V~~l~~~~g---~~v~~~GDG~ND~~al~~Advgiamg 776 (840)
+..|...++.+.+..| +.+.++||+.+|.||++.|+.++++.
T Consensus 153 g~~K~~~l~~~~~~~~~~~~~~~~~gDs~~D~~~~~~a~~~~~v~ 197 (202)
T TIGR01490 153 GEGKVHALAELLAEEQIDLKDSYAYGDSISDLPLLSLVGHPYVVN 197 (202)
T ss_pred ChHHHHHHHHHHHHcCCCHHHcEeeeCCcccHHHHHhCCCcEEeC
Confidence 5788888888765534 36888999999999999999999886
No 75
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=98.10 E-value=1.5e-05 Score=82.48 Aligned_cols=130 Identities=20% Similarity=0.192 Sum_probs=84.5
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCC----CccccChhhhcCCHHHHhhhcCCceEE---Ee
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDN----GIAIEGPEFREKSDEELSKLIPKIQVM---AR 732 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~----~~~~~g~~~~~~~~~~~~~~~~~~~v~---ar 732 (840)
+++||+.+.++.|++.|+++.++|+-....+..+.+.+ +.... ....+|..+.. ..|.-... .+
T Consensus 74 ~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~~~~~i~~n~~~~~~~~~~~--------~kp~p~~~~~~~~ 144 (219)
T PRK09552 74 EIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL-IPKEQIYCNGSDFSGEYITI--------TWPHPCDEHCQNH 144 (219)
T ss_pred CcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh-CCcCcEEEeEEEecCCeeEE--------eccCCcccccccc
Confidence 68999999999999999999999999999999999988 64311 11122221110 00000000 00
Q ss_pred cCcccHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEEecCCCcHHHHhh--cCEEeccCCchHHHHHH
Q 003189 733 SSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKES--ADVIILDDNFSTIVTVA 803 (840)
Q Consensus 733 ~~P~~K~~~V~~l~~~~g~~v~~~GDG~ND~~al~~Advgiamg~~g~~~ak~~--aDivlldd~f~~i~~~i 803 (840)
+ ...|..+++.++.. ...+.|+|||.||.+|.+.||+.++-+ .-.+.+++. +.+.+ ++|..|...+
T Consensus 145 ~-~~~K~~~l~~~~~~-~~~~i~iGDs~~Di~aa~~Ag~~~a~~-~l~~~~~~~~~~~~~~--~~f~ei~~~l 212 (219)
T PRK09552 145 C-GCCKPSLIRKLSDT-NDFHIVIGDSITDLEAAKQADKVFARD-FLITKCEELGIPYTPF--ETFHDVQTEL 212 (219)
T ss_pred C-CCchHHHHHHhccC-CCCEEEEeCCHHHHHHHHHCCcceeHH-HHHHHHHHcCCCcccc--CCHHHHHHHH
Confidence 0 13488888888766 667899999999999999999977633 111222222 44433 4577777665
No 76
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=98.09 E-value=1.4e-05 Score=80.20 Aligned_cols=114 Identities=18% Similarity=0.200 Sum_probs=77.8
Q ss_pred CCCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCC-ceEEEe-cCcc
Q 003189 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPK-IQVMAR-SSPM 736 (840)
Q Consensus 659 D~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~v~ar-~~P~ 736 (840)
-+++|++.+.++.|++.|+++.++|+.+......+.+..|+...-..++..+.... . .......+. +.++.. ....
T Consensus 71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~-~-~g~~~~~~~~~~~~~~~~~g~ 148 (188)
T TIGR01489 71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEKDVFIEIYSNPASFD-N-DGRHIVWPHHCHGCCSCPCGC 148 (188)
T ss_pred CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCChhheeEEeccCceEC-C-CCcEEEecCCCCccCcCCCCC
Confidence 47899999999999999999999999999999999999998642222222211110 0 000000011 001111 1124
Q ss_pred cHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEE
Q 003189 737 DKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLA 774 (840)
Q Consensus 737 ~K~~~V~~l~~~~g~~v~~~GDG~ND~~al~~Advgia 774 (840)
.|..+++.+++.+.+.+.++|||.||.+|.++||+-+|
T Consensus 149 ~K~~~~~~~~~~~~~~~i~iGD~~~D~~aa~~~d~~~a 186 (188)
T TIGR01489 149 CKGKVIHKLSEPKYQHIIYIGDGVTDVCPAKLSDVVFA 186 (188)
T ss_pred CHHHHHHHHHhhcCceEEEECCCcchhchHhcCCcccc
Confidence 69999999877534678999999999999999998765
No 77
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=98.06 E-value=2.1e-05 Score=81.57 Aligned_cols=125 Identities=25% Similarity=0.377 Sum_probs=86.5
Q ss_pred CCCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCcccH
Q 003189 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 738 (840)
Q Consensus 659 D~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K 738 (840)
-++.|++.+.++.|++.|+++.++|+........+.+.+|+......++.+... ....|.
T Consensus 92 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~~~------------------~~~kp~-- 151 (226)
T PRK13222 92 SRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIADYFSVVIGGDSL------------------PNKKPD-- 151 (226)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCccCccEEEcCCCC------------------CCCCcC--
Confidence 457899999999999999999999999999999999999986432222221110 112222
Q ss_pred HHHHHHHHHhC---CCEEEEEcCCccCHHHhhhCCc-cEEe--cCC-CcHHHHhhcCEEeccCCchHHHHHHHH
Q 003189 739 HTLVKHLRTTL---GEVVAVTGDGTNDAPALHEADI-GLAM--GIA-GTEVAKESADVIILDDNFSTIVTVAKW 805 (840)
Q Consensus 739 ~~~V~~l~~~~---g~~v~~~GDG~ND~~al~~Adv-giam--g~~-g~~~ak~~aDivlldd~f~~i~~~i~~ 805 (840)
...++.+.+++ .+.+.++||+.||..+.+.|++ +|.+ |.. ..+.....+|+++ +++..+...+..
T Consensus 152 ~~~~~~~~~~~~~~~~~~i~igD~~~Di~~a~~~g~~~i~v~~g~~~~~~~~~~~~~~~i--~~~~~l~~~l~~ 223 (226)
T PRK13222 152 PAPLLLACEKLGLDPEEMLFVGDSRNDIQAARAAGCPSVGVTYGYNYGEPIALSEPDVVI--DHFAELLPLLGL 223 (226)
T ss_pred hHHHHHHHHHcCCChhheEEECCCHHHHHHHHHCCCcEEEECcCCCCccchhhcCCCEEE--CCHHHHHHHHHH
Confidence 22333333332 3578999999999999999998 4444 321 2344556789888 559988887654
No 78
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=98.04 E-value=2.1e-05 Score=81.49 Aligned_cols=43 Identities=12% Similarity=0.143 Sum_probs=38.9
Q ss_pred cCCCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCc
Q 003189 658 KDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGIL 700 (840)
Q Consensus 658 ~D~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~ 700 (840)
.+..-++++++|++|+++|++++++||.....+..+.+++|+.
T Consensus 13 ~~~~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~~ 55 (225)
T TIGR02461 13 PGYEPGPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGVE 55 (225)
T ss_pred CCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC
Confidence 4556678999999999999999999999999999999999974
No 79
>PLN02382 probable sucrose-phosphatase
Probab=97.95 E-value=9.4e-05 Score=83.52 Aligned_cols=140 Identities=20% Similarity=0.201 Sum_probs=92.4
Q ss_pred chHHHH-HHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCC-ccccChhhh----------------------------
Q 003189 664 GVKESV-AICRSAGITVRMVTGDNINTAKAIARECGILTDNG-IAIEGPEFR---------------------------- 713 (840)
Q Consensus 664 ~~~~aI-~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~-~~~~g~~~~---------------------------- 713 (840)
....++ +++++.|+.+++.||+.......+.++.++..+.- ++-+|.++.
T Consensus 32 ~~~~~l~~~~~~~gi~fv~aTGR~~~~~~~l~~~~~l~~p~~~I~~nGt~I~~~~~~~~d~~w~~~l~~~w~~~~v~~~~ 111 (413)
T PLN02382 32 LRFNALWEAEYRHDSLLVFSTGRSPTLYKELRKEKPLLTPDITIMSVGTEIAYGESMVPDHGWVEYLNKKWDREIVVEET 111 (413)
T ss_pred HHHHHHHHHhhcCCeeEEEEcCCCHHHHHHHHHhCCCCCCCEEEEcCCcEEEeCCCCccChhHHHHHhccCChhhHHHHH
Confidence 344555 88999999999999999999999999999876521 000111000
Q ss_pred -cC--------------------CHH-------HHhhhcC----CceEE------EecCc--ccHHHHHHHHHHhC---C
Q 003189 714 -EK--------------------SDE-------ELSKLIP----KIQVM------ARSSP--MDKHTLVKHLRTTL---G 750 (840)
Q Consensus 714 -~~--------------------~~~-------~~~~~~~----~~~v~------ar~~P--~~K~~~V~~l~~~~---g 750 (840)
.+ .++ ++.+.+. ++.+. -...| ..|...++.|.+++ |
T Consensus 112 ~~~~~l~~q~~~~~~~~Ki~~~~~~~~~~~~~~~l~~~~~~~g~~~~i~~s~~~~ldI~p~g~sKg~Al~~L~~~~~~~g 191 (413)
T PLN02382 112 SKFPELKLQPETEQRPHKVSFYVDKKKAQEVIKELSERLEKRGLDVKIIYSGGIDLDVLPQGAGKGQALAYLLKKLKAEG 191 (413)
T ss_pred hcCCCcccCCcccCCCeEEEEEechHHhHHHHHHHHHHHHhcCCcEEEEEECCcEEEEEeCCCCHHHHHHHHHHHhhhcC
Confidence 00 010 1111110 12211 12334 57999999998886 4
Q ss_pred ---CEEEEEcCCccCHHHhhhCC-ccEEecCCCcHHHHhhc--------CEEec-cCCchHHHHHHH
Q 003189 751 ---EVVAVTGDGTNDAPALHEAD-IGLAMGIAGTEVAKESA--------DVIIL-DDNFSTIVTVAK 804 (840)
Q Consensus 751 ---~~v~~~GDG~ND~~al~~Ad-vgiamg~~g~~~ak~~a--------Divll-dd~f~~i~~~i~ 804 (840)
+.++++||+.||.+||+.|+ .||||| ++.+..|+.+ +++.. +.+-.+|.++++
T Consensus 192 i~~~~~iafGDs~NDleMl~~ag~~gvam~-NA~~elk~~a~~~~~~~~~~~~a~~~~~~GI~~al~ 257 (413)
T PLN02382 192 KAPVNTLVCGDSGNDAELFSVPDVYGVMVS-NAQEELLQWYAENAKDNPKIIHATERCAAGIIQAIG 257 (413)
T ss_pred CChhcEEEEeCCHHHHHHHhcCCCCEEEEc-CCcHHHHHHHHhhccCCCcEEEcCCCCccHHHHHHH
Confidence 57899999999999999999 699999 8888888743 55544 334556666654
No 80
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=97.89 E-value=0.0001 Score=76.29 Aligned_cols=40 Identities=15% Similarity=0.171 Sum_probs=36.4
Q ss_pred CCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCc
Q 003189 661 MRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGIL 700 (840)
Q Consensus 661 lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~ 700 (840)
.-+.++++|+.++++|++++++||.....+..+.+++|+.
T Consensus 17 ~~~~~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~~ 56 (221)
T TIGR02463 17 DWQPAAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGLT 56 (221)
T ss_pred CcHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 3344899999999999999999999999999999999975
No 81
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=97.84 E-value=6.4e-05 Score=76.77 Aligned_cols=122 Identities=22% Similarity=0.332 Sum_probs=83.2
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCcccHH
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~ 739 (840)
++.|++.+.++.|++.|+++.++|+.....+..+.+..|+...-..++...+ + ....| |.
T Consensus 75 ~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~~~f~~i~~~~~-----------------~-~~~KP--~~ 134 (205)
T TIGR01454 75 EVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLLPLFDHVIGSDE-----------------V-PRPKP--AP 134 (205)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCChhheeeEEecCc-----------------C-CCCCC--Ch
Confidence 6789999999999999999999999999999999999998542111111111 0 01122 23
Q ss_pred HHHHHHHHhCC---CEEEEEcCCccCHHHhhhCCccEE---ecC-CCcHHHHhhcCEEeccCCchHHHHHH
Q 003189 740 TLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLA---MGI-AGTEVAKESADVIILDDNFSTIVTVA 803 (840)
Q Consensus 740 ~~V~~l~~~~g---~~v~~~GDG~ND~~al~~Advgia---mg~-~g~~~ak~~aDivlldd~f~~i~~~i 803 (840)
.+++...+++| +.++|+||+.+|..+.++|++... -|. ...+..++.+|+++ +++..+..++
T Consensus 135 ~~~~~~~~~~~~~~~~~l~igD~~~Di~aA~~~Gi~~i~~~~g~~~~~~l~~~~~~~~~--~~~~~l~~~~ 203 (205)
T TIGR01454 135 DIVREALRLLDVPPEDAVMVGDAVTDLASARAAGTATVAALWGEGDAGELLAARPDFLL--RKPQSLLALC 203 (205)
T ss_pred HHHHHHHHHcCCChhheEEEcCCHHHHHHHHHcCCeEEEEEecCCChhhhhhcCCCeee--CCHHHHHHHh
Confidence 33333333324 679999999999999999998633 331 22344667899987 4477766554
No 82
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=97.82 E-value=0.00013 Score=77.66 Aligned_cols=137 Identities=13% Similarity=0.273 Sum_probs=89.6
Q ss_pred CCCcchHHHHHHHHh-CCCEEEEEcCCCHHHHHHHHHHcCCc--cCCCccc---cCh-----------------------
Q 003189 660 PMRPGVKESVAICRS-AGITVRMVTGDNINTAKAIARECGIL--TDNGIAI---EGP----------------------- 710 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~-aGi~v~m~TGD~~~ta~~iA~~~Gi~--~~~~~~~---~g~----------------------- 710 (840)
.+-++++++|+.|++ .|+.++++||+....+..+.+.+++. ..++..+ .+.
T Consensus 36 ~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~~~~l~~~~~~~i~~~l~~~~~ 115 (266)
T PRK10187 36 VVPDNILQGLQLLATANDGALALISGRSMVELDALAKPYRFPLAGVHGAERRDINGKTHIVHLPDAIARDISVQLHTALA 115 (266)
T ss_pred cCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcccceEEEeCCCeeecCCCCeeeccCChhHHHHHHHHHHHHhc
Confidence 455889999999998 79999999999999999888877642 2222110 000
Q ss_pred -----hh-----------hcCC--HHH---H----hhhcCCceEE-----EecCc--ccHHHHHHHHHHhCC---CEEEE
Q 003189 711 -----EF-----------REKS--DEE---L----SKLIPKIQVM-----ARSSP--MDKHTLVKHLRTTLG---EVVAV 755 (840)
Q Consensus 711 -----~~-----------~~~~--~~~---~----~~~~~~~~v~-----ar~~P--~~K~~~V~~l~~~~g---~~v~~ 755 (840)
.+ +... ++. + .+..+...+. ....| .+|...++.+.+.+| +.+.+
T Consensus 116 ~~pg~~ve~k~~~~~~h~r~~~~~~~~~~~l~~~i~~~~~~~~~~~g~~~lEi~p~g~~Kg~al~~ll~~~~~~~~~v~~ 195 (266)
T PRK10187 116 QLPGAELEAKGMAFALHYRQAPQHEDALLALAQRITQIWPQLALQPGKCVVEIKPRGTNKGEAIAAFMQEAPFAGRTPVF 195 (266)
T ss_pred cCCCcEEEeCCcEEEEECCCCCccHHHHHHHHHHHHhhCCceEEeCCCEEEEeeCCCCCHHHHHHHHHHhcCCCCCeEEE
Confidence 00 0000 111 1 1111111111 12233 689999999887765 57888
Q ss_pred EcCCccCHHHhhhC----CccEEecCCCcHHHHhhcCEEeccCCchHHHHHH
Q 003189 756 TGDGTNDAPALHEA----DIGLAMGIAGTEVAKESADVIILDDNFSTIVTVA 803 (840)
Q Consensus 756 ~GDG~ND~~al~~A----dvgiamg~~g~~~ak~~aDivlldd~f~~i~~~i 803 (840)
+||+.||.+||+.+ +.||+|| ++. ..|++.|.+ ...+...+
T Consensus 196 ~GD~~nD~~mf~~~~~~~g~~vavg-~a~----~~A~~~l~~--~~~v~~~L 240 (266)
T PRK10187 196 VGDDLTDEAGFAVVNRLGGISVKVG-TGA----TQASWRLAG--VPDVWSWL 240 (266)
T ss_pred EcCCccHHHHHHHHHhcCCeEEEEC-CCC----CcCeEeCCC--HHHHHHHH
Confidence 99999999999999 9999999 553 447887753 66665554
No 83
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=97.81 E-value=4e-05 Score=71.85 Aligned_cols=114 Identities=20% Similarity=0.131 Sum_probs=70.5
Q ss_pred cccCCCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCc
Q 003189 656 GIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSP 735 (840)
Q Consensus 656 ~~~D~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P 735 (840)
....++++++.+.+++|++.|++++++||.....+....+.+|+......++......................+.+-.|
T Consensus 20 ~~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (139)
T cd01427 20 IEELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDDYFDPVITSNGAAIYYPKEGLFLGGGPFDIGKPNP 99 (139)
T ss_pred cccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCchhhhheeccchhhhhcccccccccccccccCCCCH
Confidence 44568999999999999999999999999999999999999998432222221111100000000000001112222333
Q ss_pred ccHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCC
Q 003189 736 MDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEAD 770 (840)
Q Consensus 736 ~~K~~~V~~l~~~~g~~v~~~GDG~ND~~al~~Ad 770 (840)
..+..+.+.+... .+.+.++||+.||.+|++.+.
T Consensus 100 ~~~~~~~~~~~~~-~~~~~~igD~~~d~~~~~~~g 133 (139)
T cd01427 100 DKLLAALKLLGVD-PEEVLMVGDSLNDIEMAKAAG 133 (139)
T ss_pred HHHHHHHHHcCCC-hhhEEEeCCCHHHHHHHHHcC
Confidence 3344444444332 467999999999999999843
No 84
>PRK08238 hypothetical protein; Validated
Probab=97.72 E-value=0.00016 Score=82.77 Aligned_cols=98 Identities=20% Similarity=0.288 Sum_probs=75.6
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCcccHH
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~ 739 (840)
|++|++.+.+++++++|+++.++|+-+...+..+++.+|+.+ .++.+++ ..++.|+.|.
T Consensus 72 p~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGlFd---~Vigsd~------------------~~~~kg~~K~ 130 (479)
T PRK08238 72 PYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGLFD---GVFASDG------------------TTNLKGAAKA 130 (479)
T ss_pred CCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCC---EEEeCCC------------------ccccCCchHH
Confidence 588999999999999999999999999999999999999832 2222211 1135677787
Q ss_pred HHHHHHHHhCCCE-EEEEcCCccCHHHhhhCCccEEecCCCcHH
Q 003189 740 TLVKHLRTTLGEV-VAVTGDGTNDAPALHEADIGLAMGIAGTEV 782 (840)
Q Consensus 740 ~~V~~l~~~~g~~-v~~~GDG~ND~~al~~Advgiamg~~g~~~ 782 (840)
..++. .+|+. +.++||..||.|+++.|+-.++++ .+...
T Consensus 131 ~~l~~---~l~~~~~~yvGDS~~Dlp~~~~A~~av~Vn-~~~~l 170 (479)
T PRK08238 131 AALVE---AFGERGFDYAGNSAADLPVWAAARRAIVVG-ASPGV 170 (479)
T ss_pred HHHHH---HhCccCeeEecCCHHHHHHHHhCCCeEEEC-CCHHH
Confidence 65553 22433 678899999999999999999997 54444
No 85
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=97.68 E-value=0.00029 Score=74.15 Aligned_cols=43 Identities=7% Similarity=0.034 Sum_probs=38.9
Q ss_pred CCCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCcc
Q 003189 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILT 701 (840)
Q Consensus 659 D~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~ 701 (840)
+..-+.++++|++|+++||.+++.||........+.+++|+..
T Consensus 17 ~~~~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl~~ 59 (302)
T PRK12702 17 FNSYGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRLEH 59 (302)
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCCC
Confidence 3456779999999999999999999999999999999999853
No 86
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=97.64 E-value=0.00023 Score=76.06 Aligned_cols=122 Identities=19% Similarity=0.318 Sum_probs=83.9
Q ss_pred CCCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCccc-
Q 003189 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMD- 737 (840)
Q Consensus 659 D~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~- 737 (840)
.++.|++.++++.|++.|+++.++|+.+...+..+..+.|+......++.+ ...+..
T Consensus 100 ~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i~~~f~~i~~~----------------------d~~~~~K 157 (272)
T PRK13223 100 TVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKIGRYFRWIIGG----------------------DTLPQKK 157 (272)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCcHhhCeEEEec----------------------CCCCCCC
Confidence 478899999999999999999999999999999998888885421111111 112222
Q ss_pred -HHHHHHHHHHhCC---CEEEEEcCCccCHHHhhhCCcc-EEe--cC-CCcHHHHhhcCEEeccCCchHHHHHHH
Q 003189 738 -KHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIG-LAM--GI-AGTEVAKESADVIILDDNFSTIVTVAK 804 (840)
Q Consensus 738 -K~~~V~~l~~~~g---~~v~~~GDG~ND~~al~~Advg-iam--g~-~g~~~ak~~aDivlldd~f~~i~~~i~ 804 (840)
+...++.+.+++| +.+.|+||+.||..+.+.|++. +.+ |- ...+..+..+|.++ +++..+..++.
T Consensus 158 p~p~~~~~~~~~~g~~~~~~l~IGD~~~Di~aA~~aGi~~i~v~~G~~~~~~l~~~~~~~vi--~~l~el~~~~~ 230 (272)
T PRK13223 158 PDPAALLFVMKMAGVPPSQSLFVGDSRSDVLAAKAAGVQCVALSYGYNHGRPIAEESPALVI--DDLRALLPGCA 230 (272)
T ss_pred CCcHHHHHHHHHhCCChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCchhhhhcCCCEEE--CCHHHHHHHHh
Confidence 2234444333334 5789999999999999999973 333 31 12223445799988 45888876644
No 87
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=97.60 E-value=0.0006 Score=71.90 Aligned_cols=134 Identities=15% Similarity=0.205 Sum_probs=86.9
Q ss_pred cCCCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccCh-hhhcCCHHHHhhhcCCceEEEe----
Q 003189 658 KDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGP-EFREKSDEELSKLIPKIQVMAR---- 732 (840)
Q Consensus 658 ~D~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~v~ar---- 732 (840)
.-++|||+.+.++.|++.|+++.++||-....+..+.+++|+...+..++... .|. ++. +...
T Consensus 119 ~l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~~~IvSN~L~f~---~dG---------vltG~~~P 186 (277)
T TIGR01544 119 DVMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPNVKVVSNFMDFD---EDG---------VLKGFKGP 186 (277)
T ss_pred CCccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcCceEEeeeEEEC---CCC---------eEeCCCCC
Confidence 35689999999999999999999999999999999999999864432221000 000 000 1111
Q ss_pred -cCcccHHHHHHH-HHHhCC-----CEEEEEcCCccCHHHhhhC-C--ccEEecC-C-C----cHHHHhhcCEEeccCCc
Q 003189 733 -SSPMDKHTLVKH-LRTTLG-----EVVAVTGDGTNDAPALHEA-D--IGLAMGI-A-G----TEVAKESADVIILDDNF 796 (840)
Q Consensus 733 -~~P~~K~~~V~~-l~~~~g-----~~v~~~GDG~ND~~al~~A-d--vgiamg~-~-g----~~~ak~~aDivlldd~f 796 (840)
+....|...+.. ..+.+| ..+.++|||.||++|..-. . --+..|- + - .+.-+++=||||.+|.=
T Consensus 187 ~i~~~~K~~~v~~~~~~~~~~~~~~~~vI~vGDs~~Dl~ma~g~~~~~~~l~igfln~~~e~~l~~y~~~~Divl~~D~t 266 (277)
T TIGR01544 187 LIHTFNKNHDVALRNTEYFNQLKDRSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVLVQDET 266 (277)
T ss_pred cccccccHHHHHHHHHHHhCccCCcceEEEECcChhhhhHhcCCCcccceEEEEecccCHHHHHHHHHHhCCEEEECCCC
Confidence 011456665442 333333 6788999999999996544 1 1223331 1 1 12356789999999987
Q ss_pred hHHHHHH
Q 003189 797 STIVTVA 803 (840)
Q Consensus 797 ~~i~~~i 803 (840)
..++..+
T Consensus 267 ~~v~~~i 273 (277)
T TIGR01544 267 LEVANSI 273 (277)
T ss_pred chHHHHH
Confidence 7777665
No 88
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=97.59 E-value=0.00024 Score=73.12 Aligned_cols=122 Identities=19% Similarity=0.207 Sum_probs=82.2
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCcccHH
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~ 739 (840)
++.|++.+.++.|+++|+++.++|+.....+..+.+..|+...-..++.+++. .+..| |.
T Consensus 82 ~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f~~i~~~~~~------------------~~~Kp--~p 141 (214)
T PRK13288 82 TEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLDEFFDVVITLDDV------------------EHAKP--DP 141 (214)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhceeEEEecCcC------------------CCCCC--Cc
Confidence 36799999999999999999999999999999999999986422222221110 11122 22
Q ss_pred HHHHHHHHhCC---CEEEEEcCCccCHHHhhhCCcc---EEecCCCc-HHHHhhcCEEeccCCchHHHHHH
Q 003189 740 TLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIG---LAMGIAGT-EVAKESADVIILDDNFSTIVTVA 803 (840)
Q Consensus 740 ~~V~~l~~~~g---~~v~~~GDG~ND~~al~~Advg---iamg~~g~-~~ak~~aDivlldd~f~~i~~~i 803 (840)
..++.+.+++| +.+.|+||+.+|..+-++|++- +.-|.... +.....+|+++- ++..+...+
T Consensus 142 ~~~~~~~~~~~~~~~~~~~iGDs~~Di~aa~~aG~~~i~v~~g~~~~~~l~~~~~~~~i~--~~~~l~~~i 210 (214)
T PRK13288 142 EPVLKALELLGAKPEEALMVGDNHHDILAGKNAGTKTAGVAWTIKGREYLEQYKPDFMLD--KMSDLLAIV 210 (214)
T ss_pred HHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEEEcCCCCCHHHHhhcCcCEEEC--CHHHHHHHH
Confidence 33333333323 5689999999999999999984 33341122 233456898874 488777654
No 89
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=97.59 E-value=0.00021 Score=73.28 Aligned_cols=120 Identities=19% Similarity=0.283 Sum_probs=80.7
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCcccHH
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~ 739 (840)
++.|++.+.++.|++.|+++.++|+.+...+..+.+..|+...-..++.+.+. .+..| +-
T Consensus 85 ~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~~~------------------~~~Kp--~p 144 (213)
T TIGR01449 85 SVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLAKYFSVLIGGDSL------------------AQRKP--HP 144 (213)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcHhhCcEEEecCCC------------------CCCCC--Ch
Confidence 57899999999999999999999999999999999999986422222211110 01122 22
Q ss_pred HHHHHHHHhCC---CEEEEEcCCccCHHHhhhCCccEE-e--cCCC-cHHHHhhcCEEeccCCchHHHH
Q 003189 740 TLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLA-M--GIAG-TEVAKESADVIILDDNFSTIVT 801 (840)
Q Consensus 740 ~~V~~l~~~~g---~~v~~~GDG~ND~~al~~Advgia-m--g~~g-~~~ak~~aDivlldd~f~~i~~ 801 (840)
..+..+.+++| +.++|+||+.||..+.+.|++-.. + |-.. .+.....+|+++- ++..+..
T Consensus 145 ~~~~~~~~~~~~~~~~~~~igDs~~d~~aa~~aG~~~i~v~~g~~~~~~l~~~~a~~~i~--~~~~l~~ 211 (213)
T TIGR01449 145 DPLLLAAERLGVAPQQMVYVGDSRVDIQAARAAGCPSVLLTYGYRYGEAIDLLPPDVLYD--SLNELPP 211 (213)
T ss_pred HHHHHHHHHcCCChhHeEEeCCCHHHHHHHHHCCCeEEEEccCCCCCcchhhcCCCeEeC--CHHHHHh
Confidence 33333333334 568999999999999999998643 2 3111 2233456898874 3666554
No 90
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=97.57 E-value=0.00045 Score=71.47 Aligned_cols=120 Identities=18% Similarity=0.261 Sum_probs=81.0
Q ss_pred CCCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCcccH
Q 003189 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 738 (840)
Q Consensus 659 D~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K 738 (840)
-++.|++.+.++.|++.|+++.++|+........+.+.+||......++.+.+.. ...|.
T Consensus 91 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~------------------~~Kp~-- 150 (222)
T PRK10826 91 RPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLRDYFDALASAEKLP------------------YSKPH-- 150 (222)
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcchhcccEEEEcccCC------------------CCCCC--
Confidence 3578999999999999999999999999999999999999865332222222110 11232
Q ss_pred HHHHHHHHHhCC---CEEEEEcCCccCHHHhhhCCccEEecCCC---cHHHHhhcCEEeccCCchHHH
Q 003189 739 HTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAG---TEVAKESADVIILDDNFSTIV 800 (840)
Q Consensus 739 ~~~V~~l~~~~g---~~v~~~GDG~ND~~al~~Advgiamg~~g---~~~ak~~aDivlldd~f~~i~ 800 (840)
-..++.+.+++| +.+.|+||..||+++.+.|++....-..+ .+.-...+|+++. +|..+.
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~igDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~~--~~~dl~ 216 (222)
T PRK10826 151 PEVYLNCAAKLGVDPLTCVALEDSFNGMIAAKAARMRSIVVPAPEQQNDPRWALADVKLE--SLTELT 216 (222)
T ss_pred HHHHHHHHHHcCCCHHHeEEEcCChhhHHHHHHcCCEEEEecCCccCchhhhhhhheecc--CHHHHh
Confidence 224444333335 56899999999999999999864432122 2222345788773 366654
No 91
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=97.55 E-value=0.00043 Score=70.61 Aligned_cols=116 Identities=23% Similarity=0.414 Sum_probs=78.7
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcC--CccCCCccc--cChhh-hc--------------------
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECG--ILTDNGIAI--EGPEF-RE-------------------- 714 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~G--i~~~~~~~~--~g~~~-~~-------------------- 714 (840)
++.+.+.+++++|++.|+.+.++||.....+..+.++++ +...++..+ .+... ..
T Consensus 17 ~~~~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (204)
T TIGR01484 17 ELSPETIEALERLREAGVKVVLVTGRSLAEIKELLKQLPLPLIAENGALIFYPGEILYIEPSDVFEEILGIKEEIGAELK 96 (204)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHhCCCCEEECCCcEEEECCEEEEEcccccHHHHHHhhhhcCceee
Confidence 577899999999999999999999999999999998754 222232111 01000 00
Q ss_pred -C-------------------------CHH---HHhhhc-------CCceEEE------ecCc--ccHHHHHHHHHHhCC
Q 003189 715 -K-------------------------SDE---ELSKLI-------PKIQVMA------RSSP--MDKHTLVKHLRTTLG 750 (840)
Q Consensus 715 -~-------------------------~~~---~~~~~~-------~~~~v~a------r~~P--~~K~~~V~~l~~~~g 750 (840)
+ .+. ++...+ +.+.+.. ...| .+|...++.+.+++|
T Consensus 97 ~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ev~p~~~~K~~~~~~~~~~~~ 176 (204)
T TIGR01484 97 SLSEHYVGTFIEDKAIAVAIHYVGAELGQELDSKMRERLEKIGRNDLELEAIYVGKTDLEVLPAGVDKGSALQALLKELN 176 (204)
T ss_pred eeccccccceeecccceeeEEEeccchhhHHHHHHHHHHHhhccccCcEEEEEecCCEEEEecCCCChHHHHHHHHHHhC
Confidence 0 000 000000 1222321 1233 899999999887755
Q ss_pred ---CEEEEEcCCccCHHHhhhCCccEEe
Q 003189 751 ---EVVAVTGDGTNDAPALHEADIGLAM 775 (840)
Q Consensus 751 ---~~v~~~GDG~ND~~al~~Advgiam 775 (840)
+.++++||+.||.+|++.+++|+||
T Consensus 177 ~~~~~~~~~GD~~nD~~~~~~~~~~vam 204 (204)
T TIGR01484 177 GKRDEILAFGDSGNDEEMFEVAGLAVAV 204 (204)
T ss_pred CCHHHEEEEcCCHHHHHHHHHcCCceEC
Confidence 5699999999999999999999998
No 92
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=97.47 E-value=0.00061 Score=79.49 Aligned_cols=40 Identities=8% Similarity=0.179 Sum_probs=36.4
Q ss_pred CCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCc
Q 003189 661 MRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGIL 700 (840)
Q Consensus 661 lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~ 700 (840)
.-+.++++|+.|+++|+.++++||+....+..+++++|+.
T Consensus 434 i~~~t~eAL~~L~ekGI~~VIATGRs~~~i~~l~~~Lgl~ 473 (694)
T PRK14502 434 SYSTALDALRLLKDKELPLVFCSAKTMGEQDLYRNELGIK 473 (694)
T ss_pred cCHHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCC
Confidence 3456799999999999999999999999999999999974
No 93
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=97.38 E-value=0.00068 Score=70.56 Aligned_cols=125 Identities=19% Similarity=0.213 Sum_probs=82.8
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCccc--
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMD-- 737 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~-- 737 (840)
++.|++.+.++.|++.|+++.++|+.+...+..+-+..|+......++.+.+. .+..|.-
T Consensus 95 ~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~~~f~~i~~~~~~------------------~~~KP~p~~ 156 (229)
T PRK13226 95 QLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWEQRCAVLIGGDTL------------------AERKPHPLP 156 (229)
T ss_pred eeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCchhcccEEEecCcC------------------CCCCCCHHH
Confidence 57899999999999999999999999998888888889986432222222110 0112211
Q ss_pred HHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEE---ecCC-Cc-HHHHhhcCEEeccCCchHHHHHHHH
Q 003189 738 KHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLA---MGIA-GT-EVAKESADVIILDDNFSTIVTVAKW 805 (840)
Q Consensus 738 K~~~V~~l~~~~g~~v~~~GDG~ND~~al~~Advgia---mg~~-g~-~~ak~~aDivlldd~f~~i~~~i~~ 805 (840)
=..+++.+.-. .+.+.|+||+.||..+-+.|++... -|-. .. +..+..+|+++ +++..|.+.+.|
T Consensus 157 ~~~~~~~l~~~-p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~i--~~~~el~~~~~~ 226 (229)
T PRK13226 157 LLVAAERIGVA-PTDCVYVGDDERDILAARAAGMPSVAALWGYRLHDDDPLAWQADVLV--EQPQLLWNPATW 226 (229)
T ss_pred HHHHHHHhCCC-hhhEEEeCCCHHHHHHHHHCCCcEEEEeecCCCCCcChhhcCCCeee--CCHHHHHHHhcC
Confidence 12223333222 3679999999999999999998632 2311 11 22345699988 448888776655
No 94
>PTZ00174 phosphomannomutase; Provisional
Probab=97.36 E-value=0.0009 Score=70.50 Aligned_cols=53 Identities=23% Similarity=0.332 Sum_probs=44.3
Q ss_pred ccHHHHHHHHHHhCCCEEEEEcC----CccCHHHhhhC-CccEEecCCCcHHHHhhcCEE
Q 003189 736 MDKHTLVKHLRTTLGEVVAVTGD----GTNDAPALHEA-DIGLAMGIAGTEVAKESADVI 790 (840)
Q Consensus 736 ~~K~~~V~~l~~~~g~~v~~~GD----G~ND~~al~~A-dvgiamg~~g~~~ak~~aDiv 790 (840)
.+|..-++.|.++ -+.|+++|| |.||.+||+.| -.|++++ ++.+..|..+.++
T Consensus 187 vsKg~al~~L~~~-~~eviafGD~~~~~~NDieMl~~~~~~g~~v~-n~~~~~~~~~~~~ 244 (247)
T PTZ00174 187 WDKTYCLRHLEND-FKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVK-NPEDTIKILKELF 244 (247)
T ss_pred CcHHHHHHHHHhh-hhhEEEEcccCCCCCCcHhhhhcCCCceEEeC-CHHHHHHHHHHHh
Confidence 6899999999887 678999999 99999999976 5677777 8888888876654
No 95
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=97.33 E-value=0.0012 Score=67.61 Aligned_cols=107 Identities=13% Similarity=0.125 Sum_probs=74.0
Q ss_pred CCCcchHHHHH-HHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCcccH
Q 003189 660 PMRPGVKESVA-ICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 738 (840)
Q Consensus 660 ~lR~~~~~aI~-~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K 738 (840)
.++|++.+.|+ .+++.|++++++|+-....+..+|+..|+..... ++ |.++..... .++ .-..|.-++|
T Consensus 94 ~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~~~~-~i-~t~le~~~g-------g~~-~g~~c~g~~K 163 (210)
T TIGR01545 94 TAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIHRLN-LI-ASQIERGNG-------GWV-LPLRCLGHEK 163 (210)
T ss_pred CCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhccccccCc-EE-EEEeEEeCC-------ceE-cCccCCChHH
Confidence 46899999995 7888999999999999999999999966633211 11 222221000 000 1123556888
Q ss_pred HHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEEec
Q 003189 739 HTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMG 776 (840)
Q Consensus 739 ~~~V~~l~~~~g~~v~~~GDG~ND~~al~~Advgiamg 776 (840)
...++..-....+...+-||+.||.|||+.||..++++
T Consensus 164 v~rl~~~~~~~~~~~~aYsDS~~D~pmL~~a~~~~~Vn 201 (210)
T TIGR01545 164 VAQLEQKIGSPLKLYSGYSDSKQDNPLLAFCEHRWRVS 201 (210)
T ss_pred HHHHHHHhCCChhheEEecCCcccHHHHHhCCCcEEEC
Confidence 88777543211244567899999999999999999985
No 96
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=97.28 E-value=0.0014 Score=70.04 Aligned_cols=119 Identities=18% Similarity=0.277 Sum_probs=82.3
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCcccHH
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~ 739 (840)
++.|++.+.++.|++.|+++.++|+.+...+..+-+.+|+...-..++.+.+ .+ .|.
T Consensus 142 ~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~~~F~~vi~~~~----------------------~~-~k~ 198 (273)
T PRK13225 142 QLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLRSLFSVVQAGTP----------------------IL-SKR 198 (273)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhheEEEEecCC----------------------CC-CCH
Confidence 5679999999999999999999999999999999999998643222222111 11 233
Q ss_pred HHHHHHHHhCC---CEEEEEcCCccCHHHhhhCCccEE---ecCCCc-HHHHhhcCEEeccCCchHHHHHH
Q 003189 740 TLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLA---MGIAGT-EVAKESADVIILDDNFSTIVTVA 803 (840)
Q Consensus 740 ~~V~~l~~~~g---~~v~~~GDG~ND~~al~~Advgia---mg~~g~-~~ak~~aDivlldd~f~~i~~~i 803 (840)
..+..+.+++| +.++|+||+.+|..+-++|++-.. -|.... +.....+|+++ +++..+.+.+
T Consensus 199 ~~~~~~l~~~~~~p~~~l~IGDs~~Di~aA~~AG~~~I~v~~g~~~~~~l~~~~ad~~i--~~~~eL~~~~ 267 (273)
T PRK13225 199 RALSQLVAREGWQPAAVMYVGDETRDVEAARQVGLIAVAVTWGFNDRQSLVAACPDWLL--ETPSDLLQAV 267 (273)
T ss_pred HHHHHHHHHhCcChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCHHHHHHCCCCEEE--CCHHHHHHHH
Confidence 34443333323 568999999999999999998533 231111 12344699988 4588887754
No 97
>PRK11590 hypothetical protein; Provisional
Probab=97.26 E-value=0.0018 Score=66.48 Aligned_cols=107 Identities=15% Similarity=0.077 Sum_probs=73.6
Q ss_pred CCCcchHHHH-HHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCcccH
Q 003189 660 PMRPGVKESV-AICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 738 (840)
Q Consensus 660 ~lR~~~~~aI-~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K 738 (840)
+++|++.+.| +.+++.|+++.++|+-...-+..+++.+|+.... .++ |.++.. ....-..-..|..+.|
T Consensus 95 ~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~~~~~-~~i-~t~l~~--------~~tg~~~g~~c~g~~K 164 (211)
T PRK11590 95 TAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPWLPRV-NLI-ASQMQR--------RYGGWVLTLRCLGHEK 164 (211)
T ss_pred cCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHccccccC-ceE-EEEEEE--------EEccEECCccCCChHH
Confidence 4589999999 5788899999999999999999999999963211 111 222211 0000001112556888
Q ss_pred HHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEEec
Q 003189 739 HTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMG 776 (840)
Q Consensus 739 ~~~V~~l~~~~g~~v~~~GDG~ND~~al~~Advgiamg 776 (840)
...++..-.......-+-||+.||.|||+.|+..++++
T Consensus 165 ~~~l~~~~~~~~~~~~aY~Ds~~D~pmL~~a~~~~~vn 202 (211)
T PRK11590 165 VAQLERKIGTPLRLYSGYSDSKQDNPLLYFCQHRWRVT 202 (211)
T ss_pred HHHHHHHhCCCcceEEEecCCcccHHHHHhCCCCEEEC
Confidence 88777542111344557799999999999999999985
No 98
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=97.15 E-value=0.0018 Score=66.84 Aligned_cols=122 Identities=25% Similarity=0.347 Sum_probs=81.9
Q ss_pred CCCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCc--cCCCccccChhhhcCCHHHHhhhcCCceEEEecCcc
Q 003189 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGIL--TDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPM 736 (840)
Q Consensus 659 D~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~--~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~ 736 (840)
.++.||+.+.++.|++.|+++.++|+-....+..+.+.+|+. .....++.+.+.. +..|
T Consensus 86 ~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~~f~~i~~~~~~~------------------~~KP- 146 (220)
T TIGR03351 86 PVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWTVGDDVDAVVCPSDVA------------------AGRP- 146 (220)
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhhhhccCCEEEcCCcCC------------------CCCC-
Confidence 478999999999999999999999999999999999999986 3322333322210 1123
Q ss_pred cHHHHHHHHHHhCC----CEEEEEcCCccCHHHhhhCCccEE-ecCCCc---H-HHHhhcCEEeccCCchHHHHH
Q 003189 737 DKHTLVKHLRTTLG----EVVAVTGDGTNDAPALHEADIGLA-MGIAGT---E-VAKESADVIILDDNFSTIVTV 802 (840)
Q Consensus 737 ~K~~~V~~l~~~~g----~~v~~~GDG~ND~~al~~Advgia-mg~~g~---~-~ak~~aDivlldd~f~~i~~~ 802 (840)
+-.+.....+++| +.+.|+||+.+|..+-+.|++..+ +-..|. + .....+|+++ +++..+..+
T Consensus 147 -~p~~~~~a~~~~~~~~~~~~~~igD~~~Di~aa~~aG~~~~i~~~~g~~~~~~~~~~~~~~~i--~~~~~l~~~ 218 (220)
T TIGR03351 147 -APDLILRAMELTGVQDVQSVAVAGDTPNDLEAGINAGAGAVVGVLTGAHDAEELSRHPHTHVL--DSVADLPAL 218 (220)
T ss_pred -CHHHHHHHHHHcCCCChhHeEEeCCCHHHHHHHHHCCCCeEEEEecCCCcHHHHhhcCCceee--cCHHHHHHh
Confidence 2223333222223 469999999999999999999862 211222 1 2234578877 347766554
No 99
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=97.15 E-value=0.002 Score=68.30 Aligned_cols=120 Identities=15% Similarity=0.220 Sum_probs=80.4
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCcccHH
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~ 739 (840)
++.|++.+.++.|++.|+++.++|+.....+..+-+.+|+......++.+.+.. +..|. .
T Consensus 109 ~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd~ii~~~d~~------------------~~KP~--P 168 (260)
T PLN03243 109 RLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEGFFSVVLAAEDVY------------------RGKPD--P 168 (260)
T ss_pred ccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHhhCcEEEecccCC------------------CCCCC--H
Confidence 468999999999999999999999999999999999999865433444443321 11222 2
Q ss_pred HHHHHHHHhCC---CEEEEEcCCccCHHHhhhCCccE-EecCCCcHHHHhhcCEEeccCCchHHHH
Q 003189 740 TLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGL-AMGIAGTEVAKESADVIILDDNFSTIVT 801 (840)
Q Consensus 740 ~~V~~l~~~~g---~~v~~~GDG~ND~~al~~Advgi-amg~~g~~~ak~~aDivlldd~f~~i~~ 801 (840)
.+.....+++| +.++|+||..+|..+-+.|++-. ++...........+|+++. ++..+..
T Consensus 169 e~~~~a~~~l~~~p~~~l~IgDs~~Di~aA~~aG~~~i~v~g~~~~~~l~~ad~vi~--~~~el~~ 232 (260)
T PLN03243 169 EMFMYAAERLGFIPERCIVFGNSNSSVEAAHDGCMKCVAVAGKHPVYELSAGDLVVR--RLDDLSV 232 (260)
T ss_pred HHHHHHHHHhCCChHHeEEEcCCHHHHHHHHHcCCEEEEEecCCchhhhccCCEEeC--CHHHHHH
Confidence 22222222224 56899999999999999999843 3221222222345788873 4666543
No 100
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=97.05 E-value=0.0028 Score=66.83 Aligned_cols=118 Identities=14% Similarity=0.117 Sum_probs=78.8
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCcc--c
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPM--D 737 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~--~ 737 (840)
++.|++.+.++.|++.|+++.++|+-+...+..+-+.+|+......++.+.+.. +..|. -
T Consensus 108 ~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd~iv~~~~~~------------------~~KP~p~~ 169 (248)
T PLN02770 108 KPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLSDFFQAVIIGSECE------------------HAKPHPDP 169 (248)
T ss_pred CcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCChhhCcEEEecCcCC------------------CCCCChHH
Confidence 468999999999999999999999999999999999999875433333333311 11222 1
Q ss_pred HHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEE---ecCCCcHHHHhhcCEEeccCCchH
Q 003189 738 KHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLA---MGIAGTEVAKESADVIILDDNFST 798 (840)
Q Consensus 738 K~~~V~~l~~~~g~~v~~~GDG~ND~~al~~Advgia---mg~~g~~~ak~~aDivlldd~f~~ 798 (840)
=....+.+.-. .+.+.|+||..+|..+-++|++-.. -|....+.....+|+++.+ +..
T Consensus 170 ~~~a~~~~~~~-~~~~l~vgDs~~Di~aA~~aGi~~i~v~~g~~~~~l~~~~a~~vi~~--~~e 230 (248)
T PLN02770 170 YLKALEVLKVS-KDHTFVFEDSVSGIKAGVAAGMPVVGLTTRNPESLLMEAKPTFLIKD--YED 230 (248)
T ss_pred HHHHHHHhCCC-hhHEEEEcCCHHHHHHHHHCCCEEEEEeCCCCHHHHhhcCCCEEecc--chh
Confidence 12222222212 2568999999999999999997532 2311122234468988744 655
No 101
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=97.03 E-value=0.0029 Score=66.91 Aligned_cols=93 Identities=20% Similarity=0.248 Sum_probs=67.4
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCC-CccccChhhhcCCHHHHhhhcCCceEEEecCcccH
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDN-GIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 738 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K 738 (840)
++.||+.+.++.|++.|+++.++|+.....+..+-+.+|+.... ..++.+.+. .+..|. .
T Consensus 99 ~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~~~f~d~ii~~~~~------------------~~~KP~-p 159 (253)
T TIGR01422 99 SPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQGYRPDYNVTTDDV------------------PAGRPA-P 159 (253)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhcCCCCceEEccccC------------------CCCCCC-H
Confidence 46799999999999999999999999999999999999986531 223322221 011232 2
Q ss_pred HHHHHHHHHhCC----CEEEEEcCCccCHHHhhhCCcc
Q 003189 739 HTLVKHLRTTLG----EVVAVTGDGTNDAPALHEADIG 772 (840)
Q Consensus 739 ~~~V~~l~~~~g----~~v~~~GDG~ND~~al~~Advg 772 (840)
..+.+.+++. | +.+.|+||..+|..+-+.|++-
T Consensus 160 ~~~~~a~~~l-~~~~~~~~l~IGDs~~Di~aA~~aGi~ 196 (253)
T TIGR01422 160 WMALKNAIEL-GVYDVAACVKVGDTVPDIEEGRNAGMW 196 (253)
T ss_pred HHHHHHHHHc-CCCCchheEEECCcHHHHHHHHHCCCe
Confidence 3344444443 4 3589999999999999999974
No 102
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=97.01 E-value=0.0058 Score=74.65 Aligned_cols=170 Identities=18% Similarity=0.256 Sum_probs=103.7
Q ss_pred HHHHHHHHHHcccceeEEEEEEcCCCCCCCCCCCCCceeeeeeecc--cCCCCcchHHHHHHHHh-CCCEEEEEcCCCHH
Q 003189 612 LNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGI--KDPMRPGVKESVAICRS-AGITVRMVTGDNIN 688 (840)
Q Consensus 612 ~~~~~~~~~~~glr~l~~A~~~~~~~~~~~~~~~~~~~~~lg~~~~--~D~lR~~~~~aI~~l~~-aGi~v~m~TGD~~~ 688 (840)
++.....|.....|.+++-| |.|++....- ...+.+++.++++.|.+ .|+.|+++||+...
T Consensus 480 ~~~~~~~y~~~~~rLi~~D~----------------DGTL~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~ivSGR~~~ 543 (726)
T PRK14501 480 AEEIIARYRAASRRLLLLDY----------------DGTLVPFAPDPELAVPDKELRDLLRRLAADPNTDVAIISGRDRD 543 (726)
T ss_pred HHHHHHHHHhccceEEEEec----------------CccccCCCCCcccCCCCHHHHHHHHHHHcCCCCeEEEEeCCCHH
Confidence 44555666666667777642 3444433211 12367899999999999 59999999999999
Q ss_pred HHHHHHHHcCC--ccCCCccc--cChhhhc-----------------------------------------CCH------
Q 003189 689 TAKAIARECGI--LTDNGIAI--EGPEFRE-----------------------------------------KSD------ 717 (840)
Q Consensus 689 ta~~iA~~~Gi--~~~~~~~~--~g~~~~~-----------------------------------------~~~------ 717 (840)
.........++ ..+++..+ .|..+.. ..+
T Consensus 544 ~l~~~~~~~~l~liaenG~~i~~~~~~w~~~~~~~~~w~~~v~~il~~~~~~~~gs~ie~k~~~l~~~~r~~d~~~~~~~ 623 (726)
T PRK14501 544 TLERWFGDLPIHLVAEHGAWSRAPGGEWQLLEPVATEWKDAVRPILEEFVDRTPGSFIEEKEASLAWHYRNADPELGEAR 623 (726)
T ss_pred HHHHHhCCCCeEEEEeCCEEEeCCCCceEECCCcchhHHHHHHHHHHHHHhcCCCcEEEEcceEEEEEccCCCHHHHHHH
Confidence 98887765553 22222111 0111000 000
Q ss_pred -HHHh----hhcC--CceEEE-----ecCc--ccHHHHHHHHHHhCC-CEEEEEcCCccCHHHhhhC---CccEEecCCC
Q 003189 718 -EELS----KLIP--KIQVMA-----RSSP--MDKHTLVKHLRTTLG-EVVAVTGDGTNDAPALHEA---DIGLAMGIAG 779 (840)
Q Consensus 718 -~~~~----~~~~--~~~v~a-----r~~P--~~K~~~V~~l~~~~g-~~v~~~GDG~ND~~al~~A---dvgiamg~~g 779 (840)
+++. ..+. .+.+.. ...| .+|...++.+.+..+ ..++++||+.||.+||+.+ ..+++|| ++
T Consensus 624 a~~l~~~l~~~~~~~~~~v~~g~~~veV~p~~vnKG~al~~ll~~~~~d~vl~~GD~~nDe~Mf~~~~~~~~~v~vG-~~ 702 (726)
T PRK14501 624 ANELILALSSLLSNAPLEVLRGNKVVEVRPAGVNKGRAVRRLLEAGPYDFVLAIGDDTTDEDMFRALPETAITVKVG-PG 702 (726)
T ss_pred HHHHHHHHHHHhcCCCeEEEECCeEEEEEECCCCHHHHHHHHHhcCCCCEEEEECCCCChHHHHHhcccCceEEEEC-CC
Confidence 0111 1111 111111 1223 689999999887532 6899999999999999986 5899999 43
Q ss_pred cHHHHhhcCEEeccCCchHHHHHHH
Q 003189 780 TEVAKESADVIILDDNFSTIVTVAK 804 (840)
Q Consensus 780 ~~~ak~~aDivlldd~f~~i~~~i~ 804 (840)
+.+|++.|.+ -..+..+++
T Consensus 703 ----~s~A~~~l~~--~~eV~~~L~ 721 (726)
T PRK14501 703 ----ESRARYRLPS--QREVRELLR 721 (726)
T ss_pred ----CCcceEeCCC--HHHHHHHHH
Confidence 5678888864 355555543
No 103
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=96.98 E-value=0.0036 Score=66.78 Aligned_cols=122 Identities=16% Similarity=0.196 Sum_probs=80.8
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCC-CccccChhhhcCCHHHHhhhcCCceEEEecCcccH
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDN-GIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 738 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K 738 (840)
++-||+.+.++.|++.|+++.++|+.....+..+-+..|+.... ..++.+.+. ....| +.
T Consensus 101 ~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~~~~~d~i~~~~~~------------------~~~KP-~p 161 (267)
T PRK13478 101 TPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQGYRPDHVVTTDDV------------------PAGRP-YP 161 (267)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhcCCCceEEEcCCcC------------------CCCCC-Ch
Confidence 46799999999999999999999999999888888877765321 122222110 01123 22
Q ss_pred HHHHHHHHHhCC----CEEEEEcCCccCHHHhhhCCc---cEEecCCC------------------------cHHHHhhc
Q 003189 739 HTLVKHLRTTLG----EVVAVTGDGTNDAPALHEADI---GLAMGIAG------------------------TEVAKESA 787 (840)
Q Consensus 739 ~~~V~~l~~~~g----~~v~~~GDG~ND~~al~~Adv---giamg~~g------------------------~~~ak~~a 787 (840)
.-+.+.+++. | +.+.|+||+.+|..+-+.|++ |+.-|... .+.....+
T Consensus 162 ~~~~~a~~~l-~~~~~~e~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~a 240 (267)
T PRK13478 162 WMALKNAIEL-GVYDVAACVKVDDTVPGIEEGLNAGMWTVGVILSGNELGLSEEEYQALSAAELAARRERARARLRAAGA 240 (267)
T ss_pred HHHHHHHHHc-CCCCCcceEEEcCcHHHHHHHHHCCCEEEEEccCcccccCCHHHHHhcCHHHHHHHHHHHHHHHHHcCC
Confidence 3344444443 4 458999999999999999997 44444210 12334558
Q ss_pred CEEeccCCchHHHHHH
Q 003189 788 DVIILDDNFSTIVTVA 803 (840)
Q Consensus 788 Divlldd~f~~i~~~i 803 (840)
|+++ |++..+...+
T Consensus 241 ~~vi--~~~~~l~~~l 254 (267)
T PRK13478 241 HYVI--DTIADLPAVI 254 (267)
T ss_pred Ceeh--hhHHHHHHHH
Confidence 8888 4477777655
No 104
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=96.94 E-value=0.0016 Score=66.11 Aligned_cols=94 Identities=18% Similarity=0.082 Sum_probs=64.9
Q ss_pred cCCCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCccc
Q 003189 658 KDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMD 737 (840)
Q Consensus 658 ~D~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~ 737 (840)
.+++.+++.++++.|++.|+++.++||.....+..+.+.+|+......++.+.+ +...-.|+-
T Consensus 104 ~~~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~~~~~~~~-----------------~~~KP~p~~ 166 (197)
T TIGR01548 104 EDETLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLEILFPVQIWMED-----------------CPPKPNPEP 166 (197)
T ss_pred ccccccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCchhhCCEEEeecC-----------------CCCCcCHHH
Confidence 455677889999999999999999999999999999999998643222222221 111122322
Q ss_pred HHHHHHHHHHhCCCEEEEEcCCccCHHHhhhC
Q 003189 738 KHTLVKHLRTTLGEVVAVTGDGTNDAPALHEA 769 (840)
Q Consensus 738 K~~~V~~l~~~~g~~v~~~GDG~ND~~al~~A 769 (840)
-..+++.+.-. .+.+.|+||+.+|+.+-+.|
T Consensus 167 ~~~~~~~~~~~-~~~~i~vGD~~~Di~aA~~a 197 (197)
T TIGR01548 167 LILAAKALGVE-ACHAAMVGDTVDDIITGRKA 197 (197)
T ss_pred HHHHHHHhCcC-cccEEEEeCCHHHHHHHHhC
Confidence 23333433323 36789999999999987764
No 105
>COG4030 Uncharacterized protein conserved in archaea [Function unknown]
Probab=96.93 E-value=0.0053 Score=60.93 Aligned_cols=142 Identities=20% Similarity=0.281 Sum_probs=98.3
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCC---------------------------ccccChhh
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNG---------------------------IAIEGPEF 712 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~---------------------------~~~~g~~~ 712 (840)
.+-||+.++++.+++. ...+++|-...+-+.++|..+|+...+- ..++|+++
T Consensus 83 ~lvPgA~etm~~l~~~-~tp~v~STSY~qy~~r~a~~ig~Prg~~~~Te~~lD~~~~PeeeR~E~L~~~~~~~~~~geel 161 (315)
T COG4030 83 KLVPGAEETMATLQER-WTPVVISTSYTQYLRRTASMIGVPRGELHGTEVDLDSIAVPEEEREELLSIIDVIASLSGEEL 161 (315)
T ss_pred ccCCChHHHHHHHhcc-CCceEEeccHHHHHHHHHHhcCCCccccccccccCccccCChHHHHHHHHhcCccccccHHHH
Confidence 4579999999999865 6677888888999999999999964321 11222221
Q ss_pred h--------cCCHHHHhhhcCCceEEEecCcccHHHHHHHHHHhCC--CEEEEEcCCccCHHHhhhCC-c-cEEecCCCc
Q 003189 713 R--------EKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLG--EVVAVTGDGTNDAPALHEAD-I-GLAMGIAGT 780 (840)
Q Consensus 713 ~--------~~~~~~~~~~~~~~~v~ar~~P~~K~~~V~~l~~~~g--~~v~~~GDG~ND~~al~~Ad-v-giamg~~g~ 780 (840)
. .+.+.++.+++.++++... ..|.++++.+-+.-| ...+++||++.|..||+.+. - |+|+.-+|.
T Consensus 162 fe~lDe~F~rLip~E~gki~~~vk~VGg---g~ka~i~e~~~ele~~d~sa~~VGDSItDv~ml~~~rgrGglAvaFNGN 238 (315)
T COG4030 162 FEKLDELFSRLIPSEVGKIVESVKAVGG---GEKAKIMEGYCELEGIDFSAVVVGDSITDVKMLEAARGRGGLAVAFNGN 238 (315)
T ss_pred HHHHHHHHhhcCHHHHHHHHHhhhhccC---cchhHHHHHHHhhcCCCcceeEecCcccchHHHHHhhccCceEEEecCC
Confidence 1 1222333334444444433 567777777655422 34688999999999999885 2 366666899
Q ss_pred HHHHhhcCEEeccCCchHHHHHHHH
Q 003189 781 EVAKESADVIILDDNFSTIVTVAKW 805 (840)
Q Consensus 781 ~~ak~~aDivlldd~f~~i~~~i~~ 805 (840)
+-|...||+-+...+..+...+|..
T Consensus 239 eYal~eAdVAvisp~~~a~~pviel 263 (315)
T COG4030 239 EYALKEADVAVISPTAMAEAPVIEL 263 (315)
T ss_pred cccccccceEEeccchhhhhHHHHH
Confidence 9999999999998888888777654
No 106
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=96.91 E-value=0.0023 Score=66.45 Aligned_cols=88 Identities=19% Similarity=0.243 Sum_probs=62.6
Q ss_pred CCcchHHHHHHHHhCCCEEEEEcCC----CHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCcc
Q 003189 661 MRPGVKESVAICRSAGITVRMVTGD----NINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPM 736 (840)
Q Consensus 661 lR~~~~~aI~~l~~aGi~v~m~TGD----~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~ 736 (840)
+.+++++.++.+++.|+++.++|+. ...++..+.+.+|+......++.++... ...|
T Consensus 115 p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~~~f~~i~~~d~~~------------------~~Kp- 175 (237)
T TIGR01672 115 PKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIPAMNPVIFAGDKPG------------------QYQY- 175 (237)
T ss_pred chhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCchheeEEECCCCCC------------------CCCC-
Confidence 3445999999999999999999998 7779999999999964322222222210 0112
Q ss_pred cHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCcc
Q 003189 737 DKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIG 772 (840)
Q Consensus 737 ~K~~~V~~l~~~~g~~v~~~GDG~ND~~al~~Advg 772 (840)
+|. ..+++. | .+.|+||..||..+-++|++-
T Consensus 176 ~~~---~~l~~~-~-i~i~vGDs~~DI~aAk~AGi~ 206 (237)
T TIGR01672 176 TKT---QWIQDK-N-IRIHYGDSDNDITAAKEAGAR 206 (237)
T ss_pred CHH---HHHHhC-C-CeEEEeCCHHHHHHHHHCCCC
Confidence 233 344444 5 478999999999999999874
No 107
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=96.88 E-value=0.0023 Score=67.36 Aligned_cols=46 Identities=30% Similarity=0.416 Sum_probs=38.0
Q ss_pred ccHHHHHHHHHHhCC---CEEEEEcCCccCHHHhhhCCccEEecCCCcHH
Q 003189 736 MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEV 782 (840)
Q Consensus 736 ~~K~~~V~~l~~~~g---~~v~~~GDG~ND~~al~~Advgiamg~~g~~~ 782 (840)
..|...|+.|++++| +.|.++||+.||.+||..++-||.+| ++.+.
T Consensus 164 a~K~~Al~~L~~~~~~~~~~vl~aGDSgND~~mL~~~~~~vvV~-Na~~e 212 (247)
T PF05116_consen 164 ASKGAALRYLMERWGIPPEQVLVAGDSGNDLEMLEGGDHGVVVG-NAQPE 212 (247)
T ss_dssp -SHHHHHHHHHHHHT--GGGEEEEESSGGGHHHHCCSSEEEE-T-TS-HH
T ss_pred CCHHHHHHHHHHHhCCCHHHEEEEeCCCCcHHHHcCcCCEEEEc-CCCHH
Confidence 789999999998865 46777899999999999999999999 66665
No 108
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=96.76 E-value=0.0069 Score=69.94 Aligned_cols=123 Identities=14% Similarity=0.111 Sum_probs=83.0
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCcccHH
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~ 739 (840)
++.||+.+.++.|++.|+++.++|+.....+..+.+.+|+...-..++.+++.. ....|+
T Consensus 330 ~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~~~f~~i~~~d~v~-----------------~~~kP~--- 389 (459)
T PRK06698 330 ALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLDQWVTETFSIEQIN-----------------SLNKSD--- 389 (459)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcHhhcceeEecCCCC-----------------CCCCcH---
Confidence 678999999999999999999999999999999999999865323333332210 111232
Q ss_pred HHHHHHHHhCCCEEEEEcCCccCHHHhhhCCcc-EEecC-CCcHHHHhhcCEEeccCCchHHHHHHH
Q 003189 740 TLVKHLRTTLGEVVAVTGDGTNDAPALHEADIG-LAMGI-AGTEVAKESADVIILDDNFSTIVTVAK 804 (840)
Q Consensus 740 ~~V~~l~~~~g~~v~~~GDG~ND~~al~~Advg-iamg~-~g~~~ak~~aDivlldd~f~~i~~~i~ 804 (840)
-+...+++.--+.+.|+||+.+|..+-+.|++- |...- .+.+.....+|+++. ++..+.+.+.
T Consensus 390 ~~~~al~~l~~~~~v~VGDs~~Di~aAk~AG~~~I~v~~~~~~~~~~~~~d~~i~--~l~el~~~l~ 454 (459)
T PRK06698 390 LVKSILNKYDIKEAAVVGDRLSDINAAKDNGLIAIGCNFDFAQEDELAQADIVID--DLLELKGILS 454 (459)
T ss_pred HHHHHHHhcCcceEEEEeCCHHHHHHHHHCCCeEEEEeCCCCcccccCCCCEEeC--CHHHHHHHHH
Confidence 222223222135799999999999999999974 33320 222222345899874 4877776654
No 109
>PRK11587 putative phosphatase; Provisional
Probab=96.73 E-value=0.0067 Score=62.56 Aligned_cols=111 Identities=16% Similarity=0.213 Sum_probs=72.7
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCcccHH
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~ 739 (840)
++.||+.+.++.|+++|+++.++|+.....+...-+..|+... ..++.+++. .+..|.- .
T Consensus 83 ~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l~~~-~~i~~~~~~------------------~~~KP~p-~ 142 (218)
T PRK11587 83 TALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGLPAP-EVFVTAERV------------------KRGKPEP-D 142 (218)
T ss_pred eeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCCCCc-cEEEEHHHh------------------cCCCCCc-H
Confidence 5789999999999999999999999887777776677777321 222222211 1122321 2
Q ss_pred HHHHHHHHhCC---CEEEEEcCCccCHHHhhhCCcc-EEecCCCc-HHHHhhcCEEec
Q 003189 740 TLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIG-LAMGIAGT-EVAKESADVIIL 792 (840)
Q Consensus 740 ~~V~~l~~~~g---~~v~~~GDG~ND~~al~~Advg-iamg~~g~-~~ak~~aDivll 792 (840)
-+...+++. | +.+.|+||..+|+.+-+.|++- |++. .+. ......+|+++.
T Consensus 143 ~~~~~~~~~-g~~p~~~l~igDs~~di~aA~~aG~~~i~v~-~~~~~~~~~~~~~~~~ 198 (218)
T PRK11587 143 AYLLGAQLL-GLAPQECVVVEDAPAGVLSGLAAGCHVIAVN-APADTPRLDEVDLVLH 198 (218)
T ss_pred HHHHHHHHc-CCCcccEEEEecchhhhHHHHHCCCEEEEEC-CCCchhhhccCCEEec
Confidence 223333332 4 6799999999999999999984 5554 332 223345788764
No 110
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=96.69 E-value=0.012 Score=55.33 Aligned_cols=90 Identities=20% Similarity=0.219 Sum_probs=64.1
Q ss_pred CCCCcchHHHHHHHHhCCCEEEEEcCCC--------HHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEE
Q 003189 659 DPMRPGVKESVAICRSAGITVRMVTGDN--------INTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVM 730 (840)
Q Consensus 659 D~lR~~~~~aI~~l~~aGi~v~m~TGD~--------~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ 730 (840)
-++.|++.++++.|+++|+++.++|+.. .....++.+.+|+.... . ++
T Consensus 24 ~~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~~~~-~-----------------------~~ 79 (132)
T TIGR01662 24 RILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGVPIDV-L-----------------------YA 79 (132)
T ss_pred heeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCCCEEE-E-----------------------EE
Confidence 4678999999999999999999999998 77788888988885210 0 11
Q ss_pred EecCcccHHHHHHHHHHhC----CCEEEEEcC-CccCHHHhhhCCcc
Q 003189 731 ARSSPMDKHTLVKHLRTTL----GEVVAVTGD-GTNDAPALHEADIG 772 (840)
Q Consensus 731 ar~~P~~K~~~V~~l~~~~----g~~v~~~GD-G~ND~~al~~Advg 772 (840)
+...+.-|..+++.+.+++ .+.++|+|| ..+|..+.+.+++-
T Consensus 80 ~~~~~KP~~~~~~~~~~~~~~~~~~~~v~IGD~~~~Di~~A~~~Gi~ 126 (132)
T TIGR01662 80 CPHCRKPKPGMFLEALKRFNEIDPEESVYVGDQDLTDLQAAKRAGLA 126 (132)
T ss_pred CCCCCCCChHHHHHHHHHcCCCChhheEEEcCCCcccHHHHHHCCCe
Confidence 1001122334444444443 267999999 59999999998763
No 111
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=96.60 E-value=0.0098 Score=57.87 Aligned_cols=103 Identities=17% Similarity=0.242 Sum_probs=68.7
Q ss_pred cCCCCcchHHHHHHHHhCCCEEEEEcCCCHHHHH---HHHHHc---C--CccCCCccc-cChhhhcCCHHHHhhhcCCce
Q 003189 658 KDPMRPGVKESVAICRSAGITVRMVTGDNINTAK---AIAREC---G--ILTDNGIAI-EGPEFREKSDEELSKLIPKIQ 728 (840)
Q Consensus 658 ~D~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~---~iA~~~---G--i~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~ 728 (840)
+|.+.|+++++++.++++|+++.++||.....+. ....++ | +.. ..++. +|..+..... .
T Consensus 25 ~~~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp~-g~li~~~g~~~~~~~~----------e 93 (157)
T smart00775 25 KDWTHPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQIKQDGHNLPH-GPVLLSPDRLFAALHR----------E 93 (157)
T ss_pred cCcCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHHhhhccccCCC-ceEEEcCCcchhhhhc----------c
Confidence 5788999999999999999999999999988874 555552 3 321 11221 2222211100 0
Q ss_pred EEEecCccc-HHHHHHHHHHhC----CCEEEEEcCCccCHHHhhhCCcc
Q 003189 729 VMARSSPMD-KHTLVKHLRTTL----GEVVAVTGDGTNDAPALHEADIG 772 (840)
Q Consensus 729 v~ar~~P~~-K~~~V~~l~~~~----g~~v~~~GDG~ND~~al~~Advg 772 (840)
+. ...|+. |...++.+++.+ ...++.+|++.+|+.+-++++|-
T Consensus 94 ~i-~~~~~~~K~~~l~~i~~~~~~~~~~f~~~~gn~~~D~~~y~~~gi~ 141 (157)
T smart00775 94 VI-SKKPEVFKIACLRDIKSLFPPQGNPFYAGFGNRITDVISYSAVGIP 141 (157)
T ss_pred cc-cCCHHHHHHHHHHHHHHhcCCCCCCEEEEeCCCchhHHHHHHcCCC
Confidence 11 123433 888888887742 36788899999999999987653
No 112
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=96.60 E-value=0.0054 Score=63.65 Aligned_cols=85 Identities=21% Similarity=0.306 Sum_probs=63.1
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCCC----HHHHHHHHHHcCCc--cCCCccccChhhhcCCHHHHhhhcCCceEEEec
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGDN----INTAKAIARECGIL--TDNGIAIEGPEFREKSDEELSKLIPKIQVMARS 733 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD~----~~ta~~iA~~~Gi~--~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~ 733 (840)
.+.|++++.++.+++.|+++.++|+.. ..++..+.+..||. ..... +++..
T Consensus 114 ~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gip~~~~f~v-----------------------il~gd 170 (237)
T PRK11009 114 IPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHIPADNMNPV-----------------------IFAGD 170 (237)
T ss_pred cchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCCCcccceeE-----------------------EEcCC
Confidence 367789999999999999999999964 66999999999994 21111 23322
Q ss_pred Cc--ccHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCcc
Q 003189 734 SP--MDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIG 772 (840)
Q Consensus 734 ~P--~~K~~~V~~l~~~~g~~v~~~GDG~ND~~al~~Advg 772 (840)
++ .+|.. .+++. | .++|+||..+|..+-++|++-
T Consensus 171 ~~~K~~K~~---~l~~~-~-i~I~IGDs~~Di~aA~~AGi~ 206 (237)
T PRK11009 171 KPGQYTKTQ---WLKKK-N-IRIFYGDSDNDITAAREAGAR 206 (237)
T ss_pred CCCCCCHHH---HHHhc-C-CeEEEcCCHHHHHHHHHcCCc
Confidence 22 34544 44444 4 488999999999999999874
No 113
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=96.55 E-value=0.01 Score=65.77 Aligned_cols=119 Identities=18% Similarity=0.226 Sum_probs=80.1
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCcccH-
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK- 738 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K- 738 (840)
++.||+.+.++.|+++|+++.++|+.+...+..+-+..||......++.+.+.. +..|...
T Consensus 216 ~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~~yFd~Iv~sddv~------------------~~KP~Pei 277 (381)
T PLN02575 216 RLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIRGFFSVIVAAEDVY------------------RGKPDPEM 277 (381)
T ss_pred CcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCHHHceEEEecCcCC------------------CCCCCHHH
Confidence 467999999999999999999999999999999999999865333333333211 1123211
Q ss_pred -HHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccE-EecCCCcHHH-HhhcCEEeccCCchHHH
Q 003189 739 -HTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGL-AMGIAGTEVA-KESADVIILDDNFSTIV 800 (840)
Q Consensus 739 -~~~V~~l~~~~g~~v~~~GDG~ND~~al~~Advgi-amg~~g~~~a-k~~aDivlldd~f~~i~ 800 (840)
...++.+.-. .+.++|+||..+|+.|-+.|++-. ++. .+.+.. ...+|+++ +++..+.
T Consensus 278 fl~A~~~lgl~-Peecl~IGDS~~DIeAAk~AGm~~IgV~-~~~~~~~l~~Ad~iI--~s~~EL~ 338 (381)
T PLN02575 278 FIYAAQLLNFI-PERCIVFGNSNQTVEAAHDARMKCVAVA-SKHPIYELGAADLVV--RRLDELS 338 (381)
T ss_pred HHHHHHHcCCC-cccEEEEcCCHHHHHHHHHcCCEEEEEC-CCCChhHhcCCCEEE--CCHHHHH
Confidence 1222222222 367999999999999999999853 223 332222 23588887 4477663
No 114
>PRK06769 hypothetical protein; Validated
Probab=96.54 E-value=0.011 Score=58.54 Aligned_cols=120 Identities=18% Similarity=0.122 Sum_probs=67.2
Q ss_pred CCcchHHHHHHHHhCCCEEEEEcCCCHH--------HHHHHHHHcCCccCCCccc-cChhhhcCCHHHHhhhcCCceEEE
Q 003189 661 MRPGVKESVAICRSAGITVRMVTGDNIN--------TAKAIARECGILTDNGIAI-EGPEFREKSDEELSKLIPKIQVMA 731 (840)
Q Consensus 661 lR~~~~~aI~~l~~aGi~v~m~TGD~~~--------ta~~iA~~~Gi~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~v~a 731 (840)
+-|++++.+++|++.|+++.++|+.... ......+..|+..--.... .+++ ..
T Consensus 29 ~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~------------------~~ 90 (173)
T PRK06769 29 LFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQELKGFGFDDIYLCPHKHGDG------------------CE 90 (173)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHHHhCCcCEEEECcCCCCCC------------------CC
Confidence 6899999999999999999999987631 2233344555532000000 0000 00
Q ss_pred ecCcccHHHHHHHHHHhCC---CEEEEEcCCccCHHHhhhCCccEEecCCC--cH--------HHHhhcCEEeccCCchH
Q 003189 732 RSSPMDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAG--TE--------VAKESADVIILDDNFST 798 (840)
Q Consensus 732 r~~P~~K~~~V~~l~~~~g---~~v~~~GDG~ND~~al~~Advgiamg~~g--~~--------~ak~~aDivlldd~f~~ 798 (840)
...|.- ..+-+.+++. | +.+.|+||..+|..+-+.|++-...-..| .+ ..+..+|.++ +++..
T Consensus 91 ~~KP~p-~~~~~~~~~l-~~~p~~~i~IGD~~~Di~aA~~aGi~~i~v~~g~~~~~~~~~~~~l~~~~~~~~~--~~~~e 166 (173)
T PRK06769 91 CRKPST-GMLLQAAEKH-GLDLTQCAVIGDRWTDIVAAAKVNATTILVRTGAGYDALHTYRDKWAHIEPNYIA--ENFED 166 (173)
T ss_pred CCCCCH-HHHHHHHHHc-CCCHHHeEEEcCCHHHHHHHHHCCCeEEEEecCCCchhhhhhhcccccCCCcchh--hCHHH
Confidence 112211 1122223322 3 56999999999999999999854332132 21 1123467776 33666
Q ss_pred HHHH
Q 003189 799 IVTV 802 (840)
Q Consensus 799 i~~~ 802 (840)
+...
T Consensus 167 l~~~ 170 (173)
T PRK06769 167 AVNW 170 (173)
T ss_pred HHHH
Confidence 6543
No 115
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=96.40 E-value=0.0094 Score=57.44 Aligned_cols=105 Identities=19% Similarity=0.154 Sum_probs=73.0
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcC----CccCCCccccChhhhcCCHHHHhhhcCCceEEEecCc
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECG----ILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSP 735 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~G----i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P 735 (840)
.++|+-++.++.+++.+++++++|+--..-...+-...+ |..- .++-+...+. ..-+...++-..+|
T Consensus 73 ~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~ivgke~i~~i-di~sn~~~ih--------~dg~h~i~~~~ds~ 143 (220)
T COG4359 73 KIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIVGKERIYCI-DIVSNNDYIH--------IDGQHSIKYTDDSQ 143 (220)
T ss_pred ccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhccccceeee-EEeecCceEc--------CCCceeeecCCccc
Confidence 479999999999999999999999988877887777766 3210 0000000000 00000001111222
Q ss_pred --ccHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEE
Q 003189 736 --MDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLA 774 (840)
Q Consensus 736 --~~K~~~V~~l~~~~g~~v~~~GDG~ND~~al~~Advgia 774 (840)
.+|...|+.|++. .+.+.|+|||+.|..|-+.+|+=+|
T Consensus 144 fG~dK~~vI~~l~e~-~e~~fy~GDsvsDlsaaklsDllFA 183 (220)
T COG4359 144 FGHDKSSVIHELSEP-NESIFYCGDSVSDLSAAKLSDLLFA 183 (220)
T ss_pred cCCCcchhHHHhhcC-CceEEEecCCcccccHhhhhhhHhh
Confidence 6899999999988 8889999999999999999988775
No 116
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=96.40 E-value=0.0088 Score=60.58 Aligned_cols=94 Identities=12% Similarity=0.189 Sum_probs=66.0
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCcccHH
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~ 739 (840)
++.|++.+++++|++.|+++.++|+-+......+.+.+|+......++..++. ....|.. .
T Consensus 92 ~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~~~fd~i~~s~~~------------------~~~KP~~-~ 152 (198)
T TIGR01428 92 PPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLDDPFDAVLSADAV------------------RAYKPAP-Q 152 (198)
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCChhhhheeEehhhc------------------CCCCCCH-H
Confidence 46899999999999999999999999999999999999985422222222111 1123321 2
Q ss_pred HHHHHHHHhCC---CEEEEEcCCccCHHHhhhCCccE
Q 003189 740 TLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGL 773 (840)
Q Consensus 740 ~~V~~l~~~~g---~~v~~~GDG~ND~~al~~Advgi 773 (840)
-+...+++. | +.+.++||+.+|..+-+.|++-.
T Consensus 153 ~~~~~~~~~-~~~p~~~~~vgD~~~Di~~A~~~G~~~ 188 (198)
T TIGR01428 153 VYQLALEAL-GVPPDEVLFVASNPWDLGGAKKFGFKT 188 (198)
T ss_pred HHHHHHHHh-CCChhhEEEEeCCHHHHHHHHHCCCcE
Confidence 222233332 4 56899999999999999998753
No 117
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=96.32 E-value=0.0094 Score=59.46 Aligned_cols=91 Identities=13% Similarity=0.234 Sum_probs=61.0
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCcccHH
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~ 739 (840)
++.|++.++++.|+++|+++.++|+.. .+..+.+.+|+...-..++.+.+. .+..|. ..
T Consensus 87 ~~~pg~~~~L~~L~~~g~~~~i~s~~~--~~~~~l~~~~l~~~f~~~~~~~~~------------------~~~kp~-p~ 145 (185)
T TIGR01990 87 DVLPGIKNLLDDLKKNNIKIALASASK--NAPTVLEKLGLIDYFDAIVDPAEI------------------KKGKPD-PE 145 (185)
T ss_pred ccCccHHHHHHHHHHCCCeEEEEeCCc--cHHHHHHhcCcHhhCcEEEehhhc------------------CCCCCC-hH
Confidence 578999999999999999999999753 245677888886432223222221 112232 22
Q ss_pred HHHHHHHHhCC---CEEEEEcCCccCHHHhhhCCcc
Q 003189 740 TLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIG 772 (840)
Q Consensus 740 ~~V~~l~~~~g---~~v~~~GDG~ND~~al~~Advg 772 (840)
.+-+.+++. | +.+.|+||..+|+.+-+.|++-
T Consensus 146 ~~~~~~~~~-~~~~~~~v~vgD~~~di~aA~~aG~~ 180 (185)
T TIGR01990 146 IFLAAAEGL-GVSPSECIGIEDAQAGIEAIKAAGMF 180 (185)
T ss_pred HHHHHHHHc-CCCHHHeEEEecCHHHHHHHHHcCCE
Confidence 222333332 4 5689999999999999999874
No 118
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=96.29 E-value=0.016 Score=60.13 Aligned_cols=94 Identities=12% Similarity=0.109 Sum_probs=66.5
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCcccHH
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~ 739 (840)
++.||+.+.++.|++.|+++.++|.-+...+...-+..|+......++.+.++ ....| +-
T Consensus 93 ~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~fd~iv~s~~~------------------~~~KP--~p 152 (224)
T PRK14988 93 VLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLDAHLDLLLSTHTF------------------GYPKE--DQ 152 (224)
T ss_pred CcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcHHHCCEEEEeeeC------------------CCCCC--CH
Confidence 57899999999999999999999999988888888888885422222211111 11123 23
Q ss_pred HHHHHHHHhCC---CEEEEEcCCccCHHHhhhCCccE
Q 003189 740 TLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGL 773 (840)
Q Consensus 740 ~~V~~l~~~~g---~~v~~~GDG~ND~~al~~Advgi 773 (840)
.+.....+++| +.+.|+||..+|+.+-+.|++..
T Consensus 153 ~~~~~~~~~~~~~p~~~l~igDs~~di~aA~~aG~~~ 189 (224)
T PRK14988 153 RLWQAVAEHTGLKAERTLFIDDSEPILDAAAQFGIRY 189 (224)
T ss_pred HHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHcCCeE
Confidence 34444333334 56899999999999999999963
No 119
>PLN02580 trehalose-phosphatase
Probab=96.25 E-value=0.05 Score=60.26 Aligned_cols=64 Identities=22% Similarity=0.271 Sum_probs=48.3
Q ss_pred ccHHHHHHHHHHhCC-----C-EEEEEcCCccCHHHhhh-----CCccEEecCCCcHHHHhhcCEEeccCCchHHHHHHH
Q 003189 736 MDKHTLVKHLRTTLG-----E-VVAVTGDGTNDAPALHE-----ADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAK 804 (840)
Q Consensus 736 ~~K~~~V~~l~~~~g-----~-~v~~~GDG~ND~~al~~-----Advgiamg~~g~~~ak~~aDivlldd~f~~i~~~i~ 804 (840)
.+|...|+.|.+.+| . .++++||+.||.+||+. +++||+|| ++.+. -.|++.|-+ ...+...++
T Consensus 300 ~~KG~Av~~Ll~~~g~~~~d~~~pi~iGDD~TDedmF~~L~~~~~G~~I~Vg-n~~~~--t~A~y~L~d--p~eV~~~L~ 374 (384)
T PLN02580 300 WNKGKAVEFLLESLGLSNCDDVLPIYIGDDRTDEDAFKVLREGNRGYGILVS-SVPKE--SNAFYSLRD--PSEVMEFLK 374 (384)
T ss_pred CCHHHHHHHHHHhcCCCcccceeEEEECCCchHHHHHHhhhccCCceEEEEe-cCCCC--ccceEEcCC--HHHHHHHHH
Confidence 499999999988765 1 25899999999999996 68999999 55432 357887744 666665543
No 120
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=96.15 E-value=0.028 Score=56.11 Aligned_cols=125 Identities=18% Similarity=0.131 Sum_probs=67.9
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCCCH---------------HHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhc
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGDNI---------------NTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLI 724 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD~~---------------~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~ 724 (840)
.+.||+.+++++|++.|+++.++|..+. .....+-+..|+.-. .++......
T Consensus 29 ~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~f~--~i~~~~~~~----------- 95 (181)
T PRK08942 29 IPIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLADRGGRLD--GIYYCPHHP----------- 95 (181)
T ss_pred EECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCccc--eEEECCCCC-----------
Confidence 3679999999999999999999998762 112223344554211 000000000
Q ss_pred CCceEEEecCcccHHHHHHHHHHh--CCCEEEEEcCCccCHHHhhhCCccE-EecCCCcH---HHHhhc--CEEeccCCc
Q 003189 725 PKIQVMARSSPMDKHTLVKHLRTT--LGEVVAVTGDGTNDAPALHEADIGL-AMGIAGTE---VAKESA--DVIILDDNF 796 (840)
Q Consensus 725 ~~~~v~ar~~P~~K~~~V~~l~~~--~g~~v~~~GDG~ND~~al~~Advgi-amg~~g~~---~ak~~a--Divlldd~f 796 (840)
. .......|. ..-+.+.+++. ..+.+.|+||..+|..+-+.|++.. .+. .|.. .....+ |+++ +++
T Consensus 96 ~--~~~~~~KP~-p~~~~~~~~~l~~~~~~~~~VgDs~~Di~~A~~aG~~~i~v~-~g~~~~~~~~~~~~~~~ii--~~l 169 (181)
T PRK08942 96 E--DGCDCRKPK-PGMLLSIAERLNIDLAGSPMVGDSLRDLQAAAAAGVTPVLVR-TGKGVTTLAEGAAPGTWVL--DSL 169 (181)
T ss_pred C--CCCcCCCCC-HHHHHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCeEEEEc-CCCCchhhhcccCCCceee--cCH
Confidence 0 000111221 12222233322 0367999999999999999999742 222 2221 122335 8877 347
Q ss_pred hHHHHHH
Q 003189 797 STIVTVA 803 (840)
Q Consensus 797 ~~i~~~i 803 (840)
..+.+.+
T Consensus 170 ~el~~~l 176 (181)
T PRK08942 170 ADLPQAL 176 (181)
T ss_pred HHHHHHH
Confidence 7776654
No 121
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=96.09 E-value=0.011 Score=64.15 Aligned_cols=109 Identities=14% Similarity=0.029 Sum_probs=73.5
Q ss_pred ccCCCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCcc
Q 003189 657 IKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPM 736 (840)
Q Consensus 657 ~~D~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~ 736 (840)
..+++.|++.++++.|++.|+++.++||.....+..+.+.+|+....--.+.|.+. ...+ +... --.+-.|+
T Consensus 184 ~~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~~~~f~~i~~~~~----~~~~---~~~~-~~~kp~p~ 255 (300)
T PHA02530 184 KEDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQTDIWFDDLIGRPP----DMHF---QREQ-GDKRPDDV 255 (300)
T ss_pred ccCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHcCCchhhhhCCcc----hhhh---cccC-CCCCCcHH
Confidence 57899999999999999999999999999999999999999986311111111110 0000 0000 00123345
Q ss_pred cHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccE
Q 003189 737 DKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGL 773 (840)
Q Consensus 737 ~K~~~V~~l~~~~g~~v~~~GDG~ND~~al~~Advgi 773 (840)
-+...++.+....-+.+.|+||..+|+.+-+.|++-.
T Consensus 256 ~~~~~l~~~~~~~~~~~~~vgD~~~d~~~a~~~Gi~~ 292 (300)
T PHA02530 256 VKEEIFWEKIAPKYDVLLAVDDRDQVVDMWRRIGLEC 292 (300)
T ss_pred HHHHHHHHHhccCceEEEEEcCcHHHHHHHHHhCCeE
Confidence 5566655543211267999999999999999999864
No 122
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=96.08 E-value=0.017 Score=57.67 Aligned_cols=92 Identities=17% Similarity=0.221 Sum_probs=62.1
Q ss_pred CCCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCcccH
Q 003189 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 738 (840)
Q Consensus 659 D~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K 738 (840)
-++.||+.+.++.|++.|+++.++|+. ..+..+-+.+|+...-..++.+.+ ..+..|..
T Consensus 87 ~~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~~~f~~v~~~~~------------------~~~~kp~~- 145 (185)
T TIGR02009 87 AEVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLTDYFDAIVDADE------------------VKEGKPHP- 145 (185)
T ss_pred CCCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChHHHCCEeeehhh------------------CCCCCCCh-
Confidence 368999999999999999999999987 567778888888542212221111 01123322
Q ss_pred HHHHHHHHHhCC---CEEEEEcCCccCHHHhhhCCcc
Q 003189 739 HTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIG 772 (840)
Q Consensus 739 ~~~V~~l~~~~g---~~v~~~GDG~ND~~al~~Advg 772 (840)
.+++...+++| +.+.|+||+.+|..+-+.|++.
T Consensus 146 -~~~~~~~~~~~~~~~~~v~IgD~~~di~aA~~~G~~ 181 (185)
T TIGR02009 146 -ETFLLAAELLGVSPNECVVFEDALAGVQAARAAGMF 181 (185)
T ss_pred -HHHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCe
Confidence 22233222223 5688999999999999999875
No 123
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=96.07 E-value=0.012 Score=60.68 Aligned_cols=97 Identities=16% Similarity=0.219 Sum_probs=67.3
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCcccHH
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~ 739 (840)
++.|++.+.++.|++.|+++.++|+-+...+....+.+|+......++.+.+. .+..|.. .
T Consensus 94 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~f~~i~~~~~~------------------~~~KP~~-~ 154 (221)
T TIGR02253 94 RVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVRDFFDAVITSEEE------------------GVEKPHP-K 154 (221)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChHHhccEEEEeccC------------------CCCCCCH-H
Confidence 57899999999999999999999999988888888999986432222222111 1123322 1
Q ss_pred HHHHHHHHhCC---CEEEEEcCCc-cCHHHhhhCCcc-EEec
Q 003189 740 TLVKHLRTTLG---EVVAVTGDGT-NDAPALHEADIG-LAMG 776 (840)
Q Consensus 740 ~~V~~l~~~~g---~~v~~~GDG~-ND~~al~~Advg-iamg 776 (840)
.+...+++. | +.+.|+||.. +|..+-+.|++- |...
T Consensus 155 ~~~~~~~~~-~~~~~~~~~igDs~~~di~~A~~aG~~~i~~~ 195 (221)
T TIGR02253 155 IFYAALKRL-GVKPEEAVMVGDRLDKDIKGAKNLGMKTVWIN 195 (221)
T ss_pred HHHHHHHHc-CCChhhEEEECCChHHHHHHHHHCCCEEEEEC
Confidence 233333333 4 5789999998 999999999974 4443
No 124
>PRK09449 dUMP phosphatase; Provisional
Probab=96.04 E-value=0.027 Score=58.17 Aligned_cols=121 Identities=14% Similarity=0.168 Sum_probs=76.3
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCcccHH
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~ 739 (840)
++.|++.+.++.|+ +|+++.++|......+...-+.+|+...-..++.+.+. ....|. .
T Consensus 95 ~~~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~~l~~~~l~~~fd~v~~~~~~------------------~~~KP~--p 153 (224)
T PRK09449 95 TPLPGAVELLNALR-GKVKMGIITNGFTELQQVRLERTGLRDYFDLLVISEQV------------------GVAKPD--V 153 (224)
T ss_pred ccCccHHHHHHHHH-hCCeEEEEeCCcHHHHHHHHHhCChHHHcCEEEEECcc------------------CCCCCC--H
Confidence 46899999999999 68999999999888888888888885422222211110 011232 2
Q ss_pred HHHHHHHHhCC----CEEEEEcCCc-cCHHHhhhCCcc-EEecCCCcH-HHHhhcCEEeccCCchHHHHHH
Q 003189 740 TLVKHLRTTLG----EVVAVTGDGT-NDAPALHEADIG-LAMGIAGTE-VAKESADVIILDDNFSTIVTVA 803 (840)
Q Consensus 740 ~~V~~l~~~~g----~~v~~~GDG~-ND~~al~~Advg-iamg~~g~~-~ak~~aDivlldd~f~~i~~~i 803 (840)
.+.....+++| +.+.|+||.. +|+.+-+.|++- +...-.+.+ .....+|+++ +++..+..++
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~vgD~~~~Di~~A~~aG~~~i~~~~~~~~~~~~~~~~~~i--~~~~el~~~l 222 (224)
T PRK09449 154 AIFDYALEQMGNPDRSRVLMVGDNLHSDILGGINAGIDTCWLNAHGREQPEGIAPTYQV--SSLSELEQLL 222 (224)
T ss_pred HHHHHHHHHcCCCCcccEEEEcCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCeEEE--CCHHHHHHHH
Confidence 33333323324 4699999998 799999999985 333211211 1112478877 3477776654
No 125
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=96.04 E-value=0.017 Score=57.44 Aligned_cols=92 Identities=18% Similarity=0.232 Sum_probs=61.4
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCcccHH
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~ 739 (840)
++.|++.+.++.|++.|+++.++|+-.... ..+..++|+...-..++.+.+. ....|. .
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~~~f~~i~~~~~~------------------~~~KP~--~ 143 (183)
T TIGR01509 85 KPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLRDLFDVVIFSGDV------------------GRGKPD--P 143 (183)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCHHHCCEEEEcCCC------------------CCCCCC--H
Confidence 678999999999999999999999988877 6565568885422222222110 011221 2
Q ss_pred HHHHHHHHhCC---CEEEEEcCCccCHHHhhhCCcc
Q 003189 740 TLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIG 772 (840)
Q Consensus 740 ~~V~~l~~~~g---~~v~~~GDG~ND~~al~~Advg 772 (840)
...+.+.+++| +.+.|+||...|..+-+++++-
T Consensus 144 ~~~~~~~~~~~~~~~~~~~vgD~~~di~aA~~~G~~ 179 (183)
T TIGR01509 144 DIYLLALKKLGLKPEECLFVDDSPAGIEAAKAAGMH 179 (183)
T ss_pred HHHHHHHHHcCCCcceEEEEcCCHHHHHHHHHcCCE
Confidence 22222222223 6789999999999999988873
No 126
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=96.03 E-value=0.065 Score=51.29 Aligned_cols=109 Identities=17% Similarity=0.282 Sum_probs=78.4
Q ss_pred HHHHHHcccceeEEEEEEcCCCCCCCCCCCCCceeeeeeecccCCCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHH
Q 003189 616 IEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIAR 695 (840)
Q Consensus 616 ~~~~~~~glr~l~~A~~~~~~~~~~~~~~~~~~~~~lg~~~~~D~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~ 695 (840)
.+.+..+|++++.+- + |-|+++.= ....-|++++=+.+++.+|+++.++|--+...+..++.
T Consensus 20 ~~~L~~~Gikgvi~D---l-------------DNTLv~wd--~~~~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~ 81 (175)
T COG2179 20 PDILKAHGIKGVILD---L-------------DNTLVPWD--NPDATPELRAWLAELKEAGIKVVVVSNNKESRVARAAE 81 (175)
T ss_pred HHHHHHcCCcEEEEe---c-------------cCceeccc--CCCCCHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhh
Confidence 356778899998763 2 22333221 33467888999999999999999999999999999999
Q ss_pred HcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCcccHHHHHHHHHHhCC---CEEEEEcCCc-cCHHHhhhCCc
Q 003189 696 ECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLG---EVVAVTGDGT-NDAPALHEADI 771 (840)
Q Consensus 696 ~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~~V~~l~~~~g---~~v~~~GDG~-ND~~al~~Adv 771 (840)
.+|+.- ++--..|.-+ .+-+++++. + +.|+|+||.. .|+-+=..|++
T Consensus 82 ~l~v~f---------------------------i~~A~KP~~~-~fr~Al~~m-~l~~~~vvmVGDqL~TDVlggnr~G~ 132 (175)
T COG2179 82 KLGVPF---------------------------IYRAKKPFGR-AFRRALKEM-NLPPEEVVMVGDQLFTDVLGGNRAGM 132 (175)
T ss_pred hcCCce---------------------------eecccCccHH-HHHHHHHHc-CCChhHEEEEcchhhhhhhcccccCc
Confidence 999963 3333455543 456677765 4 7899999985 46665555544
No 127
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=95.92 E-value=0.056 Score=53.39 Aligned_cols=114 Identities=11% Similarity=0.068 Sum_probs=73.3
Q ss_pred eeeeeeecccCCCCcchHHHHHHHHhCCCEEEEEcCC-CHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCc
Q 003189 649 YTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGD-NINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKI 727 (840)
Q Consensus 649 ~~~lg~~~~~D~lR~~~~~aI~~l~~aGi~v~m~TGD-~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 727 (840)
.......+-+-++.||+.+.++.|+++|+++.++|+- ....+..+...+|+...... ..+...+..+
T Consensus 34 ~~~~~~~~~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l~~~~~~------------~~~~~~Fd~i 101 (174)
T TIGR01685 34 SIIIDKSGTEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEITYAGKT------------VPMHSLFDDR 101 (174)
T ss_pred CeEEeCCCCEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCcCCCCCc------------ccHHHhceee
Confidence 3345555666688999999999999999999999976 88999999999998511100 0000001110
Q ss_pred eEEEecCcccH--HHHHHHHHHhC-----CCEEEEEcCCccCHHHhhhCCccEEe
Q 003189 728 QVMARSSPMDK--HTLVKHLRTTL-----GEVVAVTGDGTNDAPALHEADIGLAM 775 (840)
Q Consensus 728 ~v~ar~~P~~K--~~~V~~l~~~~-----g~~v~~~GDG~ND~~al~~Advgiam 775 (840)
+.+...+..| ..+.+.+.+.+ -+.++|+||...|+.+-++|++-.+.
T Consensus 102 -v~~~~~~~~kp~~~i~~~~~~~~~~gl~p~e~l~VgDs~~di~aA~~aGi~~i~ 155 (174)
T TIGR01685 102 -IEIYKPNKAKQLEMILQKVNKVDPSVLKPAQILFFDDRTDNVREVWGYGVTSCY 155 (174)
T ss_pred -eeccCCchHHHHHHHHHHhhhcccCCCCHHHeEEEcChhHhHHHHHHhCCEEEE
Confidence 2222111112 23344444321 26799999999999999999986543
No 128
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=95.89 E-value=0.017 Score=59.58 Aligned_cols=120 Identities=14% Similarity=0.117 Sum_probs=76.1
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCcccHH
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~ 739 (840)
++.|++.+.+++|++. +++.++|+-....+..+.+.+|+...-+.++...+. ....|. .
T Consensus 97 ~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~~~l~~~fd~i~~~~~~------------------~~~KP~--~ 155 (224)
T TIGR02254 97 QLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRKSGLFPFFDDIFVSEDA------------------GIQKPD--K 155 (224)
T ss_pred eeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHHCCcHhhcCEEEEcCcc------------------CCCCCC--H
Confidence 5789999999999999 999999999999999999999986432222211110 011232 2
Q ss_pred HHHHHHHHhC-C---CEEEEEcCCc-cCHHHhhhCCccE-EecC-CCcHHHHhhcCEEeccCCchHHHHH
Q 003189 740 TLVKHLRTTL-G---EVVAVTGDGT-NDAPALHEADIGL-AMGI-AGTEVAKESADVIILDDNFSTIVTV 802 (840)
Q Consensus 740 ~~V~~l~~~~-g---~~v~~~GDG~-ND~~al~~Advgi-amg~-~g~~~ak~~aDivlldd~f~~i~~~ 802 (840)
.+.+...+++ | +.+.|+||+. +|..+-+.+++-. ...- ...+.....+|+++ +++..+..+
T Consensus 156 ~~~~~~~~~~~~~~~~~~v~igD~~~~di~~A~~~G~~~i~~~~~~~~~~~~~~~~~~~--~~~~el~~~ 223 (224)
T TIGR02254 156 EIFNYALERMPKFSKEEVLMIGDSLTADIKGGQNAGLDTCWMNPDMHPNPDDIIPTYEI--RSLEELYEI 223 (224)
T ss_pred HHHHHHHHHhcCCCchheEEECCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCceEE--CCHHHHHhh
Confidence 2333322233 2 5689999998 8999999999733 2220 11212223567776 346666543
No 129
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=95.81 E-value=0.013 Score=57.41 Aligned_cols=95 Identities=21% Similarity=0.271 Sum_probs=67.0
Q ss_pred cCCCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCccc
Q 003189 658 KDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMD 737 (840)
Q Consensus 658 ~D~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~ 737 (840)
..++.|++.+.++.|++.|+++.++|+-.........+.+|+......++...+... ..|
T Consensus 75 ~~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~------------------~Kp-- 134 (176)
T PF13419_consen 75 KLQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLDDYFDEIISSDDVGS------------------RKP-- 134 (176)
T ss_dssp GEEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHGGGCSEEEEGGGSSS------------------STT--
T ss_pred ccchhhhhhhhhhhcccccceeEEeecCCcccccccccccccccccccccccchhhh------------------hhh--
Confidence 346789999999999999999999999999999999999998742222222221110 112
Q ss_pred HHHHHHHHHHhC---CCEEEEEcCCccCHHHhhhCCcc
Q 003189 738 KHTLVKHLRTTL---GEVVAVTGDGTNDAPALHEADIG 772 (840)
Q Consensus 738 K~~~V~~l~~~~---g~~v~~~GDG~ND~~al~~Advg 772 (840)
+..+.+.+.+.+ .+.+.++||+..|..+-+.|++-
T Consensus 135 ~~~~~~~~~~~~~~~p~~~~~vgD~~~d~~~A~~~G~~ 172 (176)
T PF13419_consen 135 DPDAYRRALEKLGIPPEEILFVGDSPSDVEAAKEAGIK 172 (176)
T ss_dssp SHHHHHHHHHHHTSSGGGEEEEESSHHHHHHHHHTTSE
T ss_pred HHHHHHHHHHHcCCCcceEEEEeCCHHHHHHHHHcCCe
Confidence 122333332222 36799999999999999999874
No 130
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=95.71 E-value=0.064 Score=53.27 Aligned_cols=126 Identities=20% Similarity=0.167 Sum_probs=66.2
Q ss_pred CCcchHHHHHHHHhCCCEEEEEcCCCHH---------------HHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcC
Q 003189 661 MRPGVKESVAICRSAGITVRMVTGDNIN---------------TAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIP 725 (840)
Q Consensus 661 lR~~~~~aI~~l~~aGi~v~m~TGD~~~---------------ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~ 725 (840)
+.|++.++++.|+++|+++.++|.-+.. ....+..+.|+.-. ........... ..++.
T Consensus 27 ~~pgv~e~L~~Lk~~G~~l~i~TN~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~i~~~~~~~~~--~~~~~---- 99 (176)
T TIGR00213 27 FIDGVIDALRELKKMGYALVLVTNQSGIARGYFTEAQFEQLTEWMDWSLAERDVDLD-GIYYCPHHPEG--VEEFR---- 99 (176)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCCcc-EEEECCCCCcc--ccccc----
Confidence 5799999999999999999999987631 11223333333211 00000000000 00000
Q ss_pred CceEEEecCcccHHHHHHHHHHhCC---CEEEEEcCCccCHHHhhhCCccE--EecCCCcH---HHHhhcCEEeccCCch
Q 003189 726 KIQVMARSSPMDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGL--AMGIAGTE---VAKESADVIILDDNFS 797 (840)
Q Consensus 726 ~~~v~ar~~P~~K~~~V~~l~~~~g---~~v~~~GDG~ND~~al~~Advgi--amg~~g~~---~ak~~aDivlldd~f~ 797 (840)
.-.....|. ..++....+++| +.+.|+||..+|..+-+.|++.. ... .|.. .....+|+++. ++.
T Consensus 100 --~~~~~~KP~--p~~~~~a~~~~~~~~~~~v~VGDs~~Di~aA~~aG~~~~i~v~-~g~~~~~~~~~~ad~~i~--~~~ 172 (176)
T TIGR00213 100 --QVCDCRKPK--PGMLLQARKELHIDMAQSYMVGDKLEDMQAGVAAKVKTNVLVR-TGKPITPEAENIADWVLN--SLA 172 (176)
T ss_pred --CCCCCCCCC--HHHHHHHHHHcCcChhhEEEEcCCHHHHHHHHHCCCcEEEEEe-cCCcccccccccCCEEec--cHH
Confidence 000011232 333333322324 66889999999999999999853 322 3322 22235899883 465
Q ss_pred HHH
Q 003189 798 TIV 800 (840)
Q Consensus 798 ~i~ 800 (840)
.+.
T Consensus 173 el~ 175 (176)
T TIGR00213 173 DLP 175 (176)
T ss_pred Hhh
Confidence 543
No 131
>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=95.62 E-value=0.077 Score=52.88 Aligned_cols=37 Identities=11% Similarity=0.177 Sum_probs=33.9
Q ss_pred chHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCc
Q 003189 664 GVKESVAICRSAGITVRMVTGDNINTAKAIARECGIL 700 (840)
Q Consensus 664 ~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~ 700 (840)
.+.+.+.+|+++|+.|+.+|......-...-+.+|..
T Consensus 27 pA~pv~~el~d~G~~Vi~~SSKT~aE~~~l~~~l~v~ 63 (274)
T COG3769 27 PAAPVLLELKDAGVPVILCSSKTRAEMLYLQKSLGVQ 63 (274)
T ss_pred ccchHHHHHHHcCCeEEEeccchHHHHHHHHHhcCCC
Confidence 4678999999999999999999999999999999986
No 132
>PLN02940 riboflavin kinase
Probab=95.59 E-value=0.032 Score=62.63 Aligned_cols=118 Identities=15% Similarity=0.172 Sum_probs=75.7
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHH-HcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCcccH
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIAR-ECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 738 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~-~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K 738 (840)
++.||+.+.++.|++.|+++.++|+.....+....+ ..|+...-+.++.+++. .+..|. .
T Consensus 93 ~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~Fd~ii~~d~v------------------~~~KP~-p 153 (382)
T PLN02940 93 KALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWKESFSVIVGGDEV------------------EKGKPS-P 153 (382)
T ss_pred CCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChHhhCCEEEehhhc------------------CCCCCC-H
Confidence 467999999999999999999999999888877665 67875432333333221 112231 1
Q ss_pred HHHHHHHHHh--CCCEEEEEcCCccCHHHhhhCCcc-EEecCCC--cHHHHhhcCEEeccCCchHH
Q 003189 739 HTLVKHLRTT--LGEVVAVTGDGTNDAPALHEADIG-LAMGIAG--TEVAKESADVIILDDNFSTI 799 (840)
Q Consensus 739 ~~~V~~l~~~--~g~~v~~~GDG~ND~~al~~Advg-iamg~~g--~~~ak~~aDivlldd~f~~i 799 (840)
.-+.+.+++. ..+.+.|+||+.+|+.+-+.|++. |.+. .+ .+.....+|.++.+ +..+
T Consensus 154 ~~~~~a~~~lgv~p~~~l~VGDs~~Di~aA~~aGi~~I~v~-~g~~~~~~~~~ad~~i~s--l~el 216 (382)
T PLN02940 154 DIFLEAAKRLNVEPSNCLVIEDSLPGVMAGKAAGMEVIAVP-SIPKQTHLYSSADEVINS--LLDL 216 (382)
T ss_pred HHHHHHHHHcCCChhHEEEEeCCHHHHHHHHHcCCEEEEEC-CCCcchhhccCccEEeCC--HhHc
Confidence 2233333333 036799999999999999999986 3333 22 23233457777633 5543
No 133
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=95.59 E-value=0.051 Score=52.22 Aligned_cols=90 Identities=26% Similarity=0.358 Sum_probs=61.4
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCCCH---------------HHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhc
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGDNI---------------NTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLI 724 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD~~---------------~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~ 724 (840)
++.|++.++++.|++.|+++.++|..+. ..+..+.+.+|+.... .
T Consensus 27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-~------------------- 86 (147)
T TIGR01656 27 QLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQLGVAVDG-V------------------- 86 (147)
T ss_pred EEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhCCCceeE-E-------------------
Confidence 4789999999999999999999998762 4556667778875210 0
Q ss_pred CCceEEEec-------CcccHHHHHHHHHHhCC---CEEEEEcCCccCHHHhhhCCccE
Q 003189 725 PKIQVMARS-------SPMDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGL 773 (840)
Q Consensus 725 ~~~~v~ar~-------~P~~K~~~V~~l~~~~g---~~v~~~GDG~ND~~al~~Advgi 773 (840)
+++.. ...-|..+++...+++| +.+.|+||...|..+-+.+++-.
T Consensus 87 ----~~~~~~~~~~~~~~KP~~~~~~~~~~~~~~~~~e~i~IGDs~~Di~~A~~~Gi~~ 141 (147)
T TIGR01656 87 ----LFCPHHPADNCSCRKPKPGLILEALKRLGVDASRSLVVGDRLRDLQAARNAGLAA 141 (147)
T ss_pred ----EECCCCCCCCCCCCCCCHHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHCCCCE
Confidence 11100 01223444444434335 56999999999999999998753
No 134
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=95.58 E-value=0.049 Score=53.79 Aligned_cols=85 Identities=21% Similarity=0.294 Sum_probs=62.0
Q ss_pred CCCCcchHHHHHHHHhCCCEEEEEcCCC-HHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCccc
Q 003189 659 DPMRPGVKESVAICRSAGITVRMVTGDN-INTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMD 737 (840)
Q Consensus 659 D~lR~~~~~aI~~l~~aGi~v~m~TGD~-~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~ 737 (840)
..+-|++.++++.|++.|+++.++|+.+ ...+..+.+.+|+.. ......|.
T Consensus 42 ~~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl~~---------------------------~~~~~KP~- 93 (170)
T TIGR01668 42 NEAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGIPV---------------------------LPHAVKPP- 93 (170)
T ss_pred CCcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCCEE---------------------------EcCCCCCC-
Confidence 3578999999999999999999999988 677888888888742 11112342
Q ss_pred HHHHHHHHHHhCC---CEEEEEcCCc-cCHHHhhhCCcc
Q 003189 738 KHTLVKHLRTTLG---EVVAVTGDGT-NDAPALHEADIG 772 (840)
Q Consensus 738 K~~~V~~l~~~~g---~~v~~~GDG~-ND~~al~~Advg 772 (840)
..+.....+++| +.++|+||.. .|..+-+.|++-
T Consensus 94 -p~~~~~~l~~~~~~~~~~l~IGDs~~~Di~aA~~aGi~ 131 (170)
T TIGR01668 94 -GCAFRRAHPEMGLTSEQVAVVGDRLFTDVMGGNRNGSY 131 (170)
T ss_pred -hHHHHHHHHHcCCCHHHEEEECCcchHHHHHHHHcCCe
Confidence 223333222224 5699999998 799999999974
No 135
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=95.56 E-value=0.035 Score=59.78 Aligned_cols=119 Identities=20% Similarity=0.257 Sum_probs=72.6
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccC-CC-ccccChhhhcCCHHHHhhhcCCceEEEecCccc
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD-NG-IAIEGPEFREKSDEELSKLIPKIQVMARSSPMD 737 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~-~~-~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~ 737 (840)
++.||+.+.++.|++.|+++.++|+-+......+-+..++... +. .++.+.+ +....|.
T Consensus 144 ~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~~~~~~~~~~~~v~~~~------------------~~~~KP~- 204 (286)
T PLN02779 144 PLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLLGPERAQGLDVFAGDD------------------VPKKKPD- 204 (286)
T ss_pred CchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhccccccCceEEEeccc------------------cCCCCCC-
Confidence 5789999999999999999999999988888777665532210 00 0111111 0111222
Q ss_pred HHHHHHHHHHhCC---CEEEEEcCCccCHHHhhhCCccEEecCCCc--HHHHhhcCEEeccCCchHHH
Q 003189 738 KHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGT--EVAKESADVIILDDNFSTIV 800 (840)
Q Consensus 738 K~~~V~~l~~~~g---~~v~~~GDG~ND~~al~~Advgiamg~~g~--~~ak~~aDivlldd~f~~i~ 800 (840)
..+.....+++| +.++|+||+.+|..+-+.|++....-..|. ......+|+++ +++..+.
T Consensus 205 -p~~~~~a~~~~~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~l~~ad~vi--~~~~~l~ 269 (286)
T PLN02779 205 -PDIYNLAAETLGVDPSRCVVVEDSVIGLQAAKAAGMRCIVTKSSYTADEDFSGADAVF--DCLGDVP 269 (286)
T ss_pred -HHHHHHHHHHhCcChHHEEEEeCCHHhHHHHHHcCCEEEEEccCCccccccCCCcEEE--CChhhcc
Confidence 222222222224 569999999999999999998654422322 11123588887 3465554
No 136
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=95.05 E-value=0.11 Score=54.78 Aligned_cols=87 Identities=13% Similarity=0.188 Sum_probs=62.1
Q ss_pred cCCCCcchHHHHHHHHhCCCEEEEEcCCCHH---HHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecC
Q 003189 658 KDPMRPGVKESVAICRSAGITVRMVTGDNIN---TAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSS 734 (840)
Q Consensus 658 ~D~lR~~~~~aI~~l~~aGi~v~m~TGD~~~---ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~ 734 (840)
..++-|++.+.++.+++.|+++.++|+.... .....-+..|+.... .-.++.|-.
T Consensus 116 ~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~~~~----------------------~d~lllr~~ 173 (266)
T TIGR01533 116 QAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFPQAD----------------------EEHLLLKKD 173 (266)
T ss_pred CCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcCCCC----------------------cceEEeCCC
Confidence 4567899999999999999999999998743 334555778885310 001444433
Q ss_pred cccHHHHHHHHHHhCCCEEEEEcCCccCHHHhh
Q 003189 735 PMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALH 767 (840)
Q Consensus 735 P~~K~~~V~~l~~~~g~~v~~~GDG~ND~~al~ 767 (840)
...|....+.+.+. -.+++++||..+|.....
T Consensus 174 ~~~K~~rr~~I~~~-y~Ivl~vGD~~~Df~~~~ 205 (266)
T TIGR01533 174 KSSKESRRQKVQKD-YEIVLLFGDNLLDFDDFF 205 (266)
T ss_pred CCCcHHHHHHHHhc-CCEEEEECCCHHHhhhhh
Confidence 44677777777655 477999999999986543
No 137
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=94.93 E-value=0.032 Score=53.70 Aligned_cols=94 Identities=17% Similarity=-0.014 Sum_probs=65.5
Q ss_pred cCCCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCC-CccccChhhhcCCHHHHhhhcCCceEEEecCcc
Q 003189 658 KDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDN-GIAIEGPEFREKSDEELSKLIPKIQVMARSSPM 736 (840)
Q Consensus 658 ~D~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~ 736 (840)
.-++||++.+.++.|+ .++++.++|.-+...+..+-+.+|+...- ..++.+++.. +..|.
T Consensus 43 ~v~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~il~~l~~~~~~f~~i~~~~d~~------------------~~KP~ 103 (148)
T smart00577 43 YVKKRPGVDEFLKRAS-ELFELVVFTAGLRMYADPVLDLLDPKKYFGYRRLFRDECV------------------FVKGK 103 (148)
T ss_pred EEEECCCHHHHHHHHH-hccEEEEEeCCcHHHHHHHHHHhCcCCCEeeeEEECcccc------------------ccCCe
Confidence 3357999999999999 57999999999999999999999884311 1222222211 11232
Q ss_pred cHHHHHHHHHHh--CCCEEEEEcCCccCHHHhhhCCccEE
Q 003189 737 DKHTLVKHLRTT--LGEVVAVTGDGTNDAPALHEADIGLA 774 (840)
Q Consensus 737 ~K~~~V~~l~~~--~g~~v~~~GDG~ND~~al~~Advgia 774 (840)
+.+.++.. ..+.+.|+||..+|..+-++|.|-|.
T Consensus 104 ----~~k~l~~l~~~p~~~i~i~Ds~~~~~aa~~ngI~i~ 139 (148)
T smart00577 104 ----YVKDLSLLGRDLSNVIIIDDSPDSWPFHPENLIPIK 139 (148)
T ss_pred ----EeecHHHcCCChhcEEEEECCHHHhhcCccCEEEec
Confidence 44445433 13679999999999999887766553
No 138
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=94.80 E-value=0.19 Score=52.64 Aligned_cols=94 Identities=16% Similarity=0.180 Sum_probs=61.0
Q ss_pred eeecccCCCCcchHHHHHHHHhCCCEEEEEcCCCHHHHH--HHHHHcCCcc-CCCccccChhhhcCCHHHHhhhcCCceE
Q 003189 653 GIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAK--AIARECGILT-DNGIAIEGPEFREKSDEELSKLIPKIQV 729 (840)
Q Consensus 653 g~~~~~D~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~--~iA~~~Gi~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~v 729 (840)
|.+.-...+-|++.+++++|+++|+++.++|.-...... ...+++|+.. ....+++..+.
T Consensus 17 G~l~~~~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl~~~~~~~Ii~s~~~----------------- 79 (242)
T TIGR01459 17 GVIIDGNHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGINADLPEMIISSGEI----------------- 79 (242)
T ss_pred cccccCCccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCCCccccceEEccHHH-----------------
Confidence 445556778999999999999999999999996655444 5668889864 22222221110
Q ss_pred EEecCcccHHHHHHHHHHh--CCCEEEEEcCCccCHHHhhhCC
Q 003189 730 MARSSPMDKHTLVKHLRTT--LGEVVAVTGDGTNDAPALHEAD 770 (840)
Q Consensus 730 ~ar~~P~~K~~~V~~l~~~--~g~~v~~~GDG~ND~~al~~Ad 770 (840)
....+.+.+++. .+..+.++||+.+|...+..++
T Consensus 80 -------~~~~l~~~~~~~~~~~~~~~~vGd~~~d~~~~~~~~ 115 (242)
T TIGR01459 80 -------AVQMILESKKRFDIRNGIIYLLGHLENDIINLMQCY 115 (242)
T ss_pred -------HHHHHHhhhhhccCCCceEEEeCCcccchhhhcCCC
Confidence 011222222221 1467999999999998886543
No 139
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=94.78 E-value=0.049 Score=52.53 Aligned_cols=89 Identities=18% Similarity=0.273 Sum_probs=58.5
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCcccHH
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~ 739 (840)
+..|++.+.++.|++.|+++.++|+-....+....+.. +......++...+ + . ..| +.
T Consensus 64 ~~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~-l~~~f~~i~~~~~-----------------~-~-~Kp--~~ 121 (154)
T TIGR01549 64 AYIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH-LGDYFDLILGSDE-----------------F-G-AKP--EP 121 (154)
T ss_pred eeccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH-HHhcCcEEEecCC-----------------C-C-CCc--CH
Confidence 34589999999999999999999999999888887775 3321111111000 0 0 122 23
Q ss_pred HHHHHHHHhCCC--EEEEEcCCccCHHHhhhCC
Q 003189 740 TLVKHLRTTLGE--VVAVTGDGTNDAPALHEAD 770 (840)
Q Consensus 740 ~~V~~l~~~~g~--~v~~~GDG~ND~~al~~Ad 770 (840)
.....+.+++|- .++|+||..+|..+-+.|+
T Consensus 122 ~~~~~~~~~~~~~~~~l~iGDs~~Di~aa~~aG 154 (154)
T TIGR01549 122 EIFLAALESLGLPPEVLHVGDNLNDIEGARNAG 154 (154)
T ss_pred HHHHHHHHHcCCCCCEEEEeCCHHHHHHHHHcc
Confidence 444443333342 6899999999999988764
No 140
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=94.78 E-value=0.24 Score=61.07 Aligned_cols=70 Identities=13% Similarity=0.154 Sum_probs=47.7
Q ss_pred HHHHHHHHHHcccceeEEEEEEcCCCCCCCCCCCCCceeeeeeecccCCCCcchHHHHHHH-HhCCCEEEEEcCCCHHHH
Q 003189 612 LNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAIC-RSAGITVRMVTGDNINTA 690 (840)
Q Consensus 612 ~~~~~~~~~~~glr~l~~A~~~~~~~~~~~~~~~~~~~~~lg~~~~~D~lR~~~~~aI~~l-~~aGi~v~m~TGD~~~ta 690 (840)
+++....|.....|.+++-| |.|++-.....-.+-|+..+++++| ++.|+.|.++||+...+.
T Consensus 584 ~~~i~~~y~~~~~rlI~LDy----------------DGTLlp~~~~~~~p~~~~~~~L~~L~~d~g~~VaIvSGR~~~~L 647 (854)
T PLN02205 584 MEHIVSAYKRTTTRAILLDY----------------DGTLMPQASIDKSPSSKSIDILNTLCRDKNNMVFIVSARSRKTL 647 (854)
T ss_pred HHHHHHHHHhhcCeEEEEec----------------CCcccCCccccCCCCHHHHHHHHHHHhcCCCEEEEEeCCCHHHH
Confidence 34455666666666666532 3344322222335567899999996 778999999999999999
Q ss_pred HHHHHHc
Q 003189 691 KAIAREC 697 (840)
Q Consensus 691 ~~iA~~~ 697 (840)
......+
T Consensus 648 ~~~f~~~ 654 (854)
T PLN02205 648 ADWFSPC 654 (854)
T ss_pred HHHhCCC
Confidence 9887543
No 141
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=94.61 E-value=0.17 Score=52.01 Aligned_cols=88 Identities=17% Similarity=0.138 Sum_probs=57.4
Q ss_pred cCCCCcchHHHHHHHHhCCCEEEEEcCCCHHH---HHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecC
Q 003189 658 KDPMRPGVKESVAICRSAGITVRMVTGDNINT---AKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSS 734 (840)
Q Consensus 658 ~D~lR~~~~~aI~~l~~aGi~v~m~TGD~~~t---a~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~ 734 (840)
+-|.-|++.++++.+++.|++|+++||+.... ...--++.|+..-..+++-+.+-. ....
T Consensus 118 ~apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~~G~~~~~~LiLR~~~d~-----------------~~~~ 180 (229)
T TIGR01675 118 AAPALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLINAGFTGWKHLILRGLEDS-----------------NKTV 180 (229)
T ss_pred CCCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHHcCCCCcCeeeecCCCCC-----------------CchH
Confidence 45888999999999999999999999999755 333335567753221222110000 0000
Q ss_pred cccHHHHHHHHHHhCC-CEEEEEcCCccCH
Q 003189 735 PMDKHTLVKHLRTTLG-EVVAVTGDGTNDA 763 (840)
Q Consensus 735 P~~K~~~V~~l~~~~g-~~v~~~GDG~ND~ 763 (840)
..-|...-+.+.+. | .+++.+||..+|.
T Consensus 181 ~~yKs~~R~~l~~~-GYrIv~~iGDq~sDl 209 (229)
T TIGR01675 181 VTYKSEVRKSLMEE-GYRIWGNIGDQWSDL 209 (229)
T ss_pred hHHHHHHHHHHHhC-CceEEEEECCChHHh
Confidence 01166666677766 6 6889999999996
No 142
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=94.55 E-value=0.072 Score=54.05 Aligned_cols=92 Identities=16% Similarity=0.230 Sum_probs=59.6
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCcccHH
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~ 739 (840)
++-|++.++++.|++.|+++.++|+-... .....+.+|+...-..++...+. ....|. ..
T Consensus 105 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l~~~~l~~~fd~i~~s~~~------------------~~~KP~-~~ 164 (203)
T TIGR02252 105 QVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLLEALGLLEYFDFVVTSYEV------------------GAEKPD-PK 164 (203)
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHHHHCCcHHhcceEEeeccc------------------CCCCCC-HH
Confidence 57799999999999999999999986553 46677788875321111111110 011232 12
Q ss_pred HHHHHHHHhCC---CEEEEEcCCc-cCHHHhhhCCcc
Q 003189 740 TLVKHLRTTLG---EVVAVTGDGT-NDAPALHEADIG 772 (840)
Q Consensus 740 ~~V~~l~~~~g---~~v~~~GDG~-ND~~al~~Advg 772 (840)
-+.+.+++. | +.+.|+||+. +|+.+-+.|++-
T Consensus 165 ~~~~~~~~~-~~~~~~~~~IgD~~~~Di~~A~~aG~~ 200 (203)
T TIGR02252 165 IFQEALERA-GISPEEALHIGDSLRNDYQGARAAGWR 200 (203)
T ss_pred HHHHHHHHc-CCChhHEEEECCCchHHHHHHHHcCCe
Confidence 223333333 4 6799999997 899999988753
No 143
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=94.55 E-value=0.13 Score=56.70 Aligned_cols=99 Identities=23% Similarity=0.206 Sum_probs=61.7
Q ss_pred CCCCcchHHHHHHHHhCCCEEEEEcCC---------------CHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhh
Q 003189 659 DPMRPGVKESVAICRSAGITVRMVTGD---------------NINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKL 723 (840)
Q Consensus 659 D~lR~~~~~aI~~l~~aGi~v~m~TGD---------------~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~ 723 (840)
-++.|++.++++.|+++|+++.++|.- ....+..+.+..|+.- +...+.. ... .+
T Consensus 29 ~~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~~gl~f-d~i~i~~-~~~--sd------ 98 (354)
T PRK05446 29 LAFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFESQGIKF-DEVLICP-HFP--ED------ 98 (354)
T ss_pred ceECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHHHcCCce-eeEEEeC-CcC--cc------
Confidence 467899999999999999999999983 2334556667777641 1111100 000 00
Q ss_pred cCCceEEEecCcccHHHHHHHHHHhCC---CEEEEEcCCccCHHHhhhCCccEE
Q 003189 724 IPKIQVMARSSPMDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLA 774 (840)
Q Consensus 724 ~~~~~v~ar~~P~~K~~~V~~l~~~~g---~~v~~~GDG~ND~~al~~Advgia 774 (840)
. .. ...-|-.++..+.+.++ +.+.|+||+.+|..+-+.|++-..
T Consensus 99 --~--~~---~rKP~p~~l~~a~~~l~v~~~~svmIGDs~sDi~aAk~aGi~~I 145 (354)
T PRK05446 99 --N--CS---CRKPKTGLVEEYLAEGAIDLANSYVIGDRETDVQLAENMGIKGI 145 (354)
T ss_pred --c--CC---CCCCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCeEE
Confidence 0 00 11223344544434422 679999999999999999998643
No 144
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=94.51 E-value=0.066 Score=56.24 Aligned_cols=71 Identities=18% Similarity=0.165 Sum_probs=53.7
Q ss_pred EEEecCcccHHHHHHHHHHhCC---CEEEEEcCCccCHHHhhhC--------CccEEecCCCcHHHHhhcCEEeccCCch
Q 003189 729 VMARSSPMDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEA--------DIGLAMGIAGTEVAKESADVIILDDNFS 797 (840)
Q Consensus 729 v~ar~~P~~K~~~V~~l~~~~g---~~v~~~GDG~ND~~al~~A--------dvgiamg~~g~~~ak~~aDivlldd~f~ 797 (840)
+-.+..+.+|...++.+.+.++ ..++++||+.||.+|++.+ ..|++|+ .| ..+..|++++. +..
T Consensus 159 ~e~~p~~~~Kg~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~-~g--~~~~~A~~~~~--~~~ 233 (244)
T TIGR00685 159 VELKPRFVNKGEIVKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIG-SG--SKKTVAKFHLT--GPQ 233 (244)
T ss_pred EEEeeCCCCHHHHHHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEe-cC--CcCCCceEeCC--CHH
Confidence 4445567899999999877755 4789999999999999999 5788885 33 23567899885 477
Q ss_pred HHHHHHH
Q 003189 798 TIVTVAK 804 (840)
Q Consensus 798 ~i~~~i~ 804 (840)
.+...+.
T Consensus 234 ~v~~~L~ 240 (244)
T TIGR00685 234 QVLEFLG 240 (244)
T ss_pred HHHHHHH
Confidence 7666553
No 145
>PLN02811 hydrolase
Probab=94.40 E-value=0.081 Score=54.57 Aligned_cols=97 Identities=18% Similarity=0.253 Sum_probs=57.1
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHH-HHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCcccH
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKA-IARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 738 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~-iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K 738 (840)
++.||+.+.++.|++.|+++.++||-....... ..+..|+......++.+.+.. + .+..|.-
T Consensus 78 ~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~~~l~~~f~~i~~~~~~~---------------~-~~~KP~p- 140 (220)
T PLN02811 78 DLMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHGELFSLMHHVVTGDDPE---------------V-KQGKPAP- 140 (220)
T ss_pred CCCccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHcccHHHHhhCCEEEECChhh---------------c-cCCCCCc-
Confidence 568999999999999999999999987654332 222223322111122111000 0 0111211
Q ss_pred HHHHHHHHHh----C-CCEEEEEcCCccCHHHhhhCCccE
Q 003189 739 HTLVKHLRTT----L-GEVVAVTGDGTNDAPALHEADIGL 773 (840)
Q Consensus 739 ~~~V~~l~~~----~-g~~v~~~GDG~ND~~al~~Advgi 773 (840)
.-+...+++. . .+.+.|+||...|+.+-+.|++-.
T Consensus 141 ~~~~~a~~~~~~~~~~~~~~v~IgDs~~di~aA~~aG~~~ 180 (220)
T PLN02811 141 DIFLAAARRFEDGPVDPGKVLVFEDAPSGVEAAKNAGMSV 180 (220)
T ss_pred HHHHHHHHHhCCCCCCccceEEEeccHhhHHHHHHCCCeE
Confidence 1222223322 0 267999999999999999999853
No 146
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=94.38 E-value=0.097 Score=54.15 Aligned_cols=111 Identities=23% Similarity=0.349 Sum_probs=72.1
Q ss_pred CCCcchHHHHHHH--HhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChh-hhcCCHHHHhhhcCC-ceEEEecCc
Q 003189 660 PMRPGVKESVAIC--RSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPE-FREKSDEELSKLIPK-IQVMARSSP 735 (840)
Q Consensus 660 ~lR~~~~~aI~~l--~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~-~~~~~~~~~~~~~~~-~~v~ar~~P 735 (840)
|+.|+.+++++.| ++.|+.++++|--|..--..+-+.-|+...-..+++.+. +.. .....+.|. ..-+.++.|
T Consensus 71 p~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~~~f~~I~TNpa~~~~---~G~l~v~pyh~h~C~~C~~ 147 (234)
T PF06888_consen 71 PIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLRDCFSEIFTNPACFDA---DGRLRVRPYHSHGCSLCPP 147 (234)
T ss_pred CCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCccccceEEeCCceecC---CceEEEeCccCCCCCcCCC
Confidence 6789999999999 568999999999999999999999998643222332221 110 000000000 011224444
Q ss_pred -ccHHHHHHHHHHh---CC---CEEEEEcCCccCHH-Hh--hhCCccE
Q 003189 736 -MDKHTLVKHLRTT---LG---EVVAVTGDGTNDAP-AL--HEADIGL 773 (840)
Q Consensus 736 -~~K~~~V~~l~~~---~g---~~v~~~GDG~ND~~-al--~~Advgi 773 (840)
.=|..+++.+++. .| ..|.++|||.||.. ++ +.+|+-+
T Consensus 148 NmCK~~il~~~~~~~~~~g~~~~rviYiGDG~nD~Cp~~~L~~~D~v~ 195 (234)
T PF06888_consen 148 NMCKGKILERLLQEQAQRGVPYDRVIYIGDGRNDFCPALRLRPRDVVF 195 (234)
T ss_pred ccchHHHHHHHHHHHhhcCCCcceEEEECCCCCCcCcccccCCCCEEe
Confidence 4799999998765 24 68999999999954 43 3455443
No 147
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=94.29 E-value=0.15 Score=49.77 Aligned_cols=94 Identities=23% Similarity=0.205 Sum_probs=61.5
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCCC---------------HHHHHHHHHHcCCccCCCcccc----ChhhhcCCHHHH
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGDN---------------INTAKAIARECGILTDNGIAIE----GPEFREKSDEEL 720 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD~---------------~~ta~~iA~~~Gi~~~~~~~~~----g~~~~~~~~~~~ 720 (840)
++-|++.+++++|+++|+++.++|.-. ...+..+.+.+|+.-. ..++. ..+
T Consensus 29 ~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~gl~fd-~ii~~~~~~~~~--------- 98 (161)
T TIGR01261 29 RFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQGIIFD-DVLICPHFPDDN--------- 98 (161)
T ss_pred eECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHCCCcee-EEEECCCCCCCC---------
Confidence 457899999999999999999999852 3456667777777410 01110 000
Q ss_pred hhhcCCceEEEecCcccHHHHHHHHHHhCC---CEEEEEcCCccCHHHhhhCCccEE
Q 003189 721 SKLIPKIQVMARSSPMDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLA 774 (840)
Q Consensus 721 ~~~~~~~~v~ar~~P~~K~~~V~~l~~~~g---~~v~~~GDG~ND~~al~~Advgia 774 (840)
+. ...| |..++..+.+++| +.+.|+||+.+|..+-+.|++-..
T Consensus 99 --------~~-~~KP--~~~~~~~~~~~~~~~~~e~l~IGD~~~Di~~A~~aGi~~i 144 (161)
T TIGR01261 99 --------CD-CRKP--KIKLLEPYLKKNLIDKARSYVIGDRETDMQLAENLGIRGI 144 (161)
T ss_pred --------CC-CCCC--CHHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCeEE
Confidence 00 0122 2344444444434 469999999999999999988643
No 148
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=94.22 E-value=0.096 Score=46.79 Aligned_cols=89 Identities=22% Similarity=0.306 Sum_probs=56.5
Q ss_pred eeecccCCCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHH---HHcCCccCCCccccChhhhcCCHHHHhhhcCCceE
Q 003189 653 GIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIA---RECGILTDNGIAIEGPEFREKSDEELSKLIPKIQV 729 (840)
Q Consensus 653 g~~~~~D~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA---~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v 729 (840)
|++...+.+=|++.++|+.|+++|++++++|-....+...++ +.+|+....+. +
T Consensus 7 Gvl~~g~~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi~~~~~~-----------------------i 63 (101)
T PF13344_consen 7 GVLYNGNEPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGIPVDEDE-----------------------I 63 (101)
T ss_dssp TTSEETTEE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTTT--GGG-----------------------E
T ss_pred cEeEeCCCcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCcCCCcCE-----------------------E
Confidence 566667888999999999999999999999998855544444 66787643111 2
Q ss_pred EEecCcccHHHHHHHHHH-hCCCEEEEEcCCccCHHHhhhCC
Q 003189 730 MARSSPMDKHTLVKHLRT-TLGEVVAVTGDGTNDAPALHEAD 770 (840)
Q Consensus 730 ~ar~~P~~K~~~V~~l~~-~~g~~v~~~GDG~ND~~al~~Ad 770 (840)
+... ....+.|++ ..+..|.++|.. .....++.++
T Consensus 64 ~ts~-----~~~~~~l~~~~~~~~v~vlG~~-~l~~~l~~~G 99 (101)
T PF13344_consen 64 ITSG-----MAAAEYLKEHKGGKKVYVLGSD-GLREELREAG 99 (101)
T ss_dssp EEHH-----HHHHHHHHHHTTSSEEEEES-H-HHHHHHHHTT
T ss_pred EChH-----HHHHHHHHhcCCCCEEEEEcCH-HHHHHHHHcC
Confidence 2211 234445555 236888888865 5556666654
No 149
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=94.12 E-value=0.17 Score=55.45 Aligned_cols=91 Identities=10% Similarity=0.116 Sum_probs=71.8
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHH----cCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCc
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARE----CGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSP 735 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~----~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P 735 (840)
++.+++.++++.|++.|+.+.++|.-+...+..+.+. +|+...- ......+
T Consensus 31 ~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~~~~~~~~~~~f-------------------------~~~~~~~ 85 (320)
T TIGR01686 31 PLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFERRKDFILQAEDF-------------------------DARSINW 85 (320)
T ss_pred ccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHhCccccCcHHHe-------------------------eEEEEec
Confidence 4578999999999999999999999999999999888 7775310 1112335
Q ss_pred ccHHHHHHHHHHhCC---CEEEEEcCCccCHHHhhhCCccEEe
Q 003189 736 MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAM 775 (840)
Q Consensus 736 ~~K~~~V~~l~~~~g---~~v~~~GDG~ND~~al~~Advgiam 775 (840)
..|...++.+.+.+| +.++|+||...|..+.+.+...+.+
T Consensus 86 ~pk~~~i~~~~~~l~i~~~~~vfidD~~~d~~~~~~~lp~~~~ 128 (320)
T TIGR01686 86 GPKSESLRKIAKKLNLGTDSFLFIDDNPAERANVKITLPVKTL 128 (320)
T ss_pred CchHHHHHHHHHHhCCCcCcEEEECCCHHHHHHHHHHCCCCcc
Confidence 567777777655544 7899999999999999998877644
No 150
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=93.81 E-value=0.27 Score=48.32 Aligned_cols=91 Identities=11% Similarity=0.145 Sum_probs=58.1
Q ss_pred CCcchHHHHHHHHhCCCEEEEEcCCCHH------------HHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCce
Q 003189 661 MRPGVKESVAICRSAGITVRMVTGDNIN------------TAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQ 728 (840)
Q Consensus 661 lR~~~~~aI~~l~~aGi~v~m~TGD~~~------------ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 728 (840)
+-||+.++++.|+++|+++.++|.-+.. .+..+.+.+|+.. ..++.+..
T Consensus 43 ~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~gl~~--~~ii~~~~----------------- 103 (166)
T TIGR01664 43 LYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKLKVPI--QVLAATHA----------------- 103 (166)
T ss_pred ecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHcCCCE--EEEEecCC-----------------
Confidence 4599999999999999999999975542 4566778888742 11111110
Q ss_pred EEEecCcccHHHHHHHHHHhCC-----CEEEEEcCCc--------cCHHHhhhCCccE
Q 003189 729 VMARSSPMDKHTLVKHLRTTLG-----EVVAVTGDGT--------NDAPALHEADIGL 773 (840)
Q Consensus 729 v~ar~~P~~K~~~V~~l~~~~g-----~~v~~~GDG~--------ND~~al~~Advgi 773 (840)
... ..|. ..+++.+.+++| +.+.|+||.. +|..+-++|++-.
T Consensus 104 ~~~-~KP~--p~~~~~~~~~~~~~~~~~~~v~VGD~~~~~~~~~~~Di~aA~~aGi~~ 158 (166)
T TIGR01664 104 GLY-RKPM--TGMWEYLQSQYNSPIKMTRSFYVGDAAGRKLDFSDADIKFAKNLGLEF 158 (166)
T ss_pred CCC-CCCc--cHHHHHHHHHcCCCCCchhcEEEECCCCCCCCCchhHHHHHHHCCCCc
Confidence 000 1222 223333333334 5699999986 6999999887654
No 151
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=93.67 E-value=0.17 Score=47.34 Aligned_cols=39 Identities=5% Similarity=0.135 Sum_probs=34.9
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCC-CHHHHHHHHHHcC
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGD-NINTAKAIARECG 698 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD-~~~ta~~iA~~~G 698 (840)
++.|++.+.++.|+++|+++.++|+. ....+..+-+..|
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~ 68 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFE 68 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhcc
Confidence 78999999999999999999999999 7777777777766
No 152
>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.
Probab=93.54 E-value=0.38 Score=49.58 Aligned_cols=95 Identities=13% Similarity=0.165 Sum_probs=62.9
Q ss_pred cCCCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcC---CccCCCccccChhhhcCCHHHHhhhcCCceEEEecC
Q 003189 658 KDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECG---ILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSS 734 (840)
Q Consensus 658 ~D~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~G---i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~ 734 (840)
+-++.||+.+++++|+++|+++.++|..+......+.+..+ +..- +...+. . +.+ ..
T Consensus 93 ~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~~~~~L~~~-----------------f~~~fd-~-~~g-~K 152 (220)
T TIGR01691 93 TSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHSDAGNLTPY-----------------FSGYFD-T-TVG-LK 152 (220)
T ss_pred ccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhccccchhhh-----------------cceEEE-e-Ccc-cC
Confidence 45789999999999999999999999998877777666552 2110 000000 0 111 12
Q ss_pred cccHHHHHHHHHHhCC---CEEEEEcCCccCHHHhhhCCccEE
Q 003189 735 PMDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLA 774 (840)
Q Consensus 735 P~~K~~~V~~l~~~~g---~~v~~~GDG~ND~~al~~Advgia 774 (840)
|+ ..-+.+.+++. | +.++|+||...|+.+-++|++-..
T Consensus 153 P~-p~~y~~i~~~l-gv~p~e~lfVgDs~~Di~AA~~AG~~ti 193 (220)
T TIGR01691 153 TE-AQSYVKIAGQL-GSPPREILFLSDIINELDAARKAGLHTG 193 (220)
T ss_pred CC-HHHHHHHHHHh-CcChhHEEEEeCCHHHHHHHHHcCCEEE
Confidence 32 12233333333 4 679999999999999999998643
No 153
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=92.95 E-value=0.29 Score=62.13 Aligned_cols=117 Identities=17% Similarity=0.256 Sum_probs=77.0
Q ss_pred CCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCc-cCCCccccChhhhcCCHHHHhhhcCCceEEEecCcccHH
Q 003189 661 MRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGIL-TDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (840)
Q Consensus 661 lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~ 739 (840)
+-||+.+.+++|+++|+++.++|+-....+..+-+..|+. .....++.+.+. .+..|. -
T Consensus 162 ~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~~~~Fd~iv~~~~~------------------~~~KP~--P 221 (1057)
T PLN02919 162 GFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLPLSMFDAIVSADAF------------------ENLKPA--P 221 (1057)
T ss_pred cCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCChhHCCEEEECccc------------------ccCCCC--H
Confidence 5799999999999999999999999999999998999985 212222222221 122232 2
Q ss_pred HHHHHHHHhCC---CEEEEEcCCccCHHHhhhCCcc-EEec--CCCcHHHHhhcCEEeccCCchHH
Q 003189 740 TLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIG-LAMG--IAGTEVAKESADVIILDDNFSTI 799 (840)
Q Consensus 740 ~~V~~l~~~~g---~~v~~~GDG~ND~~al~~Advg-iamg--~~g~~~ak~~aDivlldd~f~~i 799 (840)
++.....+++| +.+.|+||..+|+.+-+.|++- |.+. ....+.....+|+++-+ +..+
T Consensus 222 e~~~~a~~~lgv~p~e~v~IgDs~~Di~AA~~aGm~~I~v~~~~~~~~L~~~~a~~vi~~--l~el 285 (1057)
T PLN02919 222 DIFLAAAKILGVPTSECVVIEDALAGVQAARAAGMRCIAVTTTLSEEILKDAGPSLIRKD--IGNI 285 (1057)
T ss_pred HHHHHHHHHcCcCcccEEEEcCCHHHHHHHHHcCCEEEEECCCCCHHHHhhCCCCEEECC--hHHC
Confidence 22222222223 6789999999999999999973 3332 12223344568888744 5553
No 154
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=92.64 E-value=0.11 Score=53.52 Aligned_cols=93 Identities=14% Similarity=0.180 Sum_probs=62.2
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCC-CccccChhhhcCCHHHHhhhcCCceEEEecCcccH
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDN-GIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 738 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K 738 (840)
++.|++.+.++.| ++++.++|+.....+...-+..|+...- ..++.+.+.. +..| +
T Consensus 88 ~~~~gv~~~L~~L---~~~~~ivTn~~~~~~~~~l~~~~l~~~F~~~v~~~~~~~------------------~~KP--~ 144 (221)
T PRK10563 88 EPIAGANALLESI---TVPMCVVSNGPVSKMQHSLGKTGMLHYFPDKLFSGYDIQ------------------RWKP--D 144 (221)
T ss_pred CcCCCHHHHHHHc---CCCEEEEeCCcHHHHHHHHHhcChHHhCcceEeeHHhcC------------------CCCC--C
Confidence 4568999999988 4999999999988888888888886432 1222222110 1122 1
Q ss_pred HHHHHHHHHhCC---CEEEEEcCCccCHHHhhhCCccEEe
Q 003189 739 HTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAM 775 (840)
Q Consensus 739 ~~~V~~l~~~~g---~~v~~~GDG~ND~~al~~Advgiam 775 (840)
-.++....+++| +.++|+||..+|..+-+.|++....
T Consensus 145 p~~~~~a~~~~~~~p~~~l~igDs~~di~aA~~aG~~~i~ 184 (221)
T PRK10563 145 PALMFHAAEAMNVNVENCILVDDSSAGAQSGIAAGMEVFY 184 (221)
T ss_pred hHHHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCEEEE
Confidence 233333222324 5689999999999999999987653
No 155
>PLN03017 trehalose-phosphatase
Probab=92.44 E-value=2.1 Score=47.23 Aligned_cols=63 Identities=19% Similarity=0.240 Sum_probs=45.5
Q ss_pred ccHHHHHHHHHHhCC------CEEEEEcCCccCHHHhhhC-----CccEEecCCCcHHHHhhcCEEeccCCchHHHHHH
Q 003189 736 MDKHTLVKHLRTTLG------EVVAVTGDGTNDAPALHEA-----DIGLAMGIAGTEVAKESADVIILDDNFSTIVTVA 803 (840)
Q Consensus 736 ~~K~~~V~~l~~~~g------~~v~~~GDG~ND~~al~~A-----dvgiamg~~g~~~ak~~aDivlldd~f~~i~~~i 803 (840)
-+|...|+.|.+.+| ..+.++||...|-.|++.. ++||.+|.... ...|++.|- +...+...+
T Consensus 282 ~dKG~Av~~LL~~l~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~VG~~~k---~T~A~y~L~--dp~eV~~fL 355 (366)
T PLN03017 282 WDKGKALEFLLESLGFGNTNNVFPVYIGDDRTDEDAFKMLRDRGEGFGILVSKFPK---DTDASYSLQ--DPSEVMDFL 355 (366)
T ss_pred CCHHHHHHHHHHhcccccCCCceEEEeCCCCccHHHHHHHhhcCCceEEEECCCCC---CCcceEeCC--CHHHHHHHH
Confidence 499999999887644 2588999999999999865 47777873111 245888873 477666554
No 156
>PLN02423 phosphomannomutase
Probab=92.24 E-value=0.77 Score=48.23 Aligned_cols=39 Identities=26% Similarity=0.357 Sum_probs=33.2
Q ss_pred ccHHHHHHHHHHhCCCEEEEEcC----CccCHHHhhh-CCccEEec
Q 003189 736 MDKHTLVKHLRTTLGEVVAVTGD----GTNDAPALHE-ADIGLAMG 776 (840)
Q Consensus 736 ~~K~~~V~~l~~~~g~~v~~~GD----G~ND~~al~~-Advgiamg 776 (840)
.+|...++.|+ . .+.|+++|| |.||.+||+. -=.|+++-
T Consensus 188 vnKg~al~~L~-~-~~e~~aFGD~~~~~~ND~eMl~~~~~~~~~~~ 231 (245)
T PLN02423 188 WDKTYCLQFLE-D-FDEIHFFGDKTYEGGNDHEIFESERTIGHTVT 231 (245)
T ss_pred CCHHHHHHHhc-C-cCeEEEEeccCCCCCCcHHHHhCCCcceEEeC
Confidence 68999999998 5 678899999 8999999997 55688774
No 157
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=92.06 E-value=0.14 Score=52.34 Aligned_cols=89 Identities=16% Similarity=0.203 Sum_probs=55.3
Q ss_pred CCCCcchHHHHHHHHhCCCEEEEEcCCCHHH--HHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEe----
Q 003189 659 DPMRPGVKESVAICRSAGITVRMVTGDNINT--AKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMAR---- 732 (840)
Q Consensus 659 D~lR~~~~~aI~~l~~aGi~v~m~TGD~~~t--a~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar---- 732 (840)
-++.|++.+.++.|++.|+++.++|...... ........|+... +.. +++.
T Consensus 93 ~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~l~~~---------------------fd~--v~~s~~~~ 149 (211)
T TIGR02247 93 TKLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLPGDIMAL---------------------FDA--VVESCLEG 149 (211)
T ss_pred cccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhhhhhHhh---------------------CCE--EEEeeecC
Confidence 3678999999999999999999999875432 2222223343221 111 2211
Q ss_pred -cCcccHHHHHHHHHHhCC---CEEEEEcCCccCHHHhhhCCcc
Q 003189 733 -SSPMDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIG 772 (840)
Q Consensus 733 -~~P~~K~~~V~~l~~~~g---~~v~~~GDG~ND~~al~~Advg 772 (840)
..|.- .+.+...+++| +.++|+||...|+.+-++|++-
T Consensus 150 ~~KP~p--~~~~~~~~~~g~~~~~~l~i~D~~~di~aA~~aG~~ 191 (211)
T TIGR02247 150 LRKPDP--RIYQLMLERLGVAPEECVFLDDLGSNLKPAAALGIT 191 (211)
T ss_pred CCCCCH--HHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHcCCE
Confidence 12322 22222222224 5688899999999999999984
No 158
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=91.10 E-value=0.3 Score=49.41 Aligned_cols=94 Identities=15% Similarity=0.173 Sum_probs=57.5
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHH-cCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCcccH
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARE-CGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 738 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~-~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K 738 (840)
++.|++.++++.|++.|+++.++|.-+.......-.. .++...-..++...+ +....| +
T Consensus 84 ~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~~fd~v~~s~~------------------~~~~KP--~ 143 (199)
T PRK09456 84 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRAAADHIYLSQD------------------LGMRKP--E 143 (199)
T ss_pred ccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHHhcCEEEEecc------------------cCCCCC--C
Confidence 4689999999999999999999999876654433222 233211111111110 001123 2
Q ss_pred HHHHHHHHHhCC---CEEEEEcCCccCHHHhhhCCccE
Q 003189 739 HTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGL 773 (840)
Q Consensus 739 ~~~V~~l~~~~g---~~v~~~GDG~ND~~al~~Advgi 773 (840)
..+.+...+++| +.+.++||...|+.+-++|++-.
T Consensus 144 p~~~~~~~~~~~~~p~~~l~vgD~~~di~aA~~aG~~~ 181 (199)
T PRK09456 144 ARIYQHVLQAEGFSAADAVFFDDNADNIEAANALGITS 181 (199)
T ss_pred HHHHHHHHHHcCCChhHeEEeCCCHHHHHHHHHcCCEE
Confidence 333333333324 56899999999999999998854
No 159
>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25). The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....
Probab=90.72 E-value=0.51 Score=48.94 Aligned_cols=90 Identities=21% Similarity=0.280 Sum_probs=57.6
Q ss_pred CCCCcchHHHHHHHHhCCCEEEEEcCCCHH---HHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCc
Q 003189 659 DPMRPGVKESVAICRSAGITVRMVTGDNIN---TAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSP 735 (840)
Q Consensus 659 D~lR~~~~~aI~~l~~aGi~v~m~TGD~~~---ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P 735 (840)
+|.=|++.+.++.+++.|++|+++||++.. ....=-++.|+...+.+++.+..-.. .....
T Consensus 114 ~~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~~nL~~~G~~~~~~l~lr~~~~~~----------------~~~~~ 177 (229)
T PF03767_consen 114 APAIPGALELYNYARSRGVKVFFITGRPESQREATEKNLKKAGFPGWDHLILRPDKDPS----------------KKSAV 177 (229)
T ss_dssp GEEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHHHHHHHHTTSTBSCGEEEEESSTS----------------S----
T ss_pred CcccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHHcCCCccchhccccccccc----------------ccccc
Confidence 466688999999999999999999998854 22223355676432222221111000 00012
Q ss_pred ccHHHHHHHHHHhCC-CEEEEEcCCccCHHH
Q 003189 736 MDKHTLVKHLRTTLG-EVVAVTGDGTNDAPA 765 (840)
Q Consensus 736 ~~K~~~V~~l~~~~g-~~v~~~GDG~ND~~a 765 (840)
.-|...-+.+++. | ++++++||..+|...
T Consensus 178 ~yK~~~r~~i~~~-Gy~Ii~~iGD~~~D~~~ 207 (229)
T PF03767_consen 178 EYKSERRKEIEKK-GYRIIANIGDQLSDFSG 207 (229)
T ss_dssp --SHHHHHHHHHT-TEEEEEEEESSGGGCHC
T ss_pred ccchHHHHHHHHc-CCcEEEEeCCCHHHhhc
Confidence 3488888888887 7 688999999999765
No 160
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=90.45 E-value=0.93 Score=44.33 Aligned_cols=82 Identities=20% Similarity=0.175 Sum_probs=61.9
Q ss_pred cCCCCcchHHHHHHHHhCCC--EEEEEcCC-------CHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCce
Q 003189 658 KDPMRPGVKESVAICRSAGI--TVRMVTGD-------NINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQ 728 (840)
Q Consensus 658 ~D~lR~~~~~aI~~l~~aGi--~v~m~TGD-------~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 728 (840)
++.+-|+..+.+++|++.+. +|.++|-- +...|.++++.+||.--
T Consensus 57 ~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~~~~~lgIpvl-------------------------- 110 (168)
T PF09419_consen 57 EDEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEALEKALGIPVL-------------------------- 110 (168)
T ss_pred cCcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHHHHHhhCCcEE--------------------------
Confidence 67888999999999999976 59999986 48899999999998620
Q ss_pred EEEecCcccHHHHHHHHHHh----CCCEEEEEcCCc-cCHHH
Q 003189 729 VMARSSPMDKHTLVKHLRTT----LGEVVAVTGDGT-NDAPA 765 (840)
Q Consensus 729 v~ar~~P~~K~~~V~~l~~~----~g~~v~~~GDG~-ND~~a 765 (840)
.+....|.-..++.+.++.+ .-+.++|+||-. -|+-+
T Consensus 111 ~h~~kKP~~~~~i~~~~~~~~~~~~p~eiavIGDrl~TDVl~ 152 (168)
T PF09419_consen 111 RHRAKKPGCFREILKYFKCQKVVTSPSEIAVIGDRLFTDVLM 152 (168)
T ss_pred EeCCCCCccHHHHHHHHhhccCCCCchhEEEEcchHHHHHHH
Confidence 12335787667788877643 135699999974 34443
No 161
>PHA02597 30.2 hypothetical protein; Provisional
Probab=90.26 E-value=0.99 Score=45.45 Aligned_cols=94 Identities=15% Similarity=0.123 Sum_probs=57.7
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCcccHH
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~ 739 (840)
++.||+.++++.|++.+ +..++|.-+..+....-+.+|+..-. ...+ ...+.++... -|-
T Consensus 74 ~~~pG~~e~L~~L~~~~-~~~i~Tn~~~~~~~~~~~~~~l~~~f-----------------~~~f-~~i~~~~~~~-~kp 133 (197)
T PHA02597 74 SAYDDALDVINKLKEDY-DFVAVTALGDSIDALLNRQFNLNALF-----------------PGAF-SEVLMCGHDE-SKE 133 (197)
T ss_pred cCCCCHHHHHHHHHhcC-CEEEEeCCccchhHHHHhhCCHHHhC-----------------CCcc-cEEEEeccCc-ccH
Confidence 46899999999999985 56666765544444455566664210 0000 0012233222 244
Q ss_pred HHHHHHHHhCC-CEEEEEcCCccCHHHhhhC--CccE
Q 003189 740 TLVKHLRTTLG-EVVAVTGDGTNDAPALHEA--DIGL 773 (840)
Q Consensus 740 ~~V~~l~~~~g-~~v~~~GDG~ND~~al~~A--dvgi 773 (840)
.++....+++| +.++|+||..+|..+-++| ++-.
T Consensus 134 ~~~~~a~~~~~~~~~v~vgDs~~di~aA~~a~~Gi~~ 170 (197)
T PHA02597 134 KLFIKAKEKYGDRVVCFVDDLAHNLDAAHEALSQLPV 170 (197)
T ss_pred HHHHHHHHHhCCCcEEEeCCCHHHHHHHHHHHcCCcE
Confidence 55555444446 4578999999999999999 9853
No 162
>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=90.16 E-value=0.45 Score=47.70 Aligned_cols=121 Identities=21% Similarity=0.268 Sum_probs=71.2
Q ss_pred CCCcchHHHHHHHHhCCC-EEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCC-c-eEEEecCc-
Q 003189 660 PMRPGVKESVAICRSAGI-TVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPK-I-QVMARSSP- 735 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi-~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~-~-~v~ar~~P- 735 (840)
|+-|+..++|+.+++.|- .++++|--|..-...+-+..||..-...+.+.+.--. ..-...+.|. . .-+.+|.|
T Consensus 84 P~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~~~~d~F~~IfTNPa~~d--a~G~L~v~pyH~~hsC~~CPsN 161 (256)
T KOG3120|consen 84 PIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAAGIHDLFSEIFTNPACVD--ASGRLLVRPYHTQHSCNLCPSN 161 (256)
T ss_pred CCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHccHHHHHHHHhcCCcccC--CCCcEEeecCCCCCccCcCchh
Confidence 678999999999999996 9999999999888888888887531001111000000 0000000000 0 01222222
Q ss_pred ccHHHHHHHHHHhC---C---CEEEEEcCCccC-HHHhhhCCccEEecCCCcHH
Q 003189 736 MDKHTLVKHLRTTL---G---EVVAVTGDGTND-APALHEADIGLAMGIAGTEV 782 (840)
Q Consensus 736 ~~K~~~V~~l~~~~---g---~~v~~~GDG~ND-~~al~~Advgiamg~~g~~~ 782 (840)
.=|..++..++... | +.+.++|||.|| +|+++...--+||--.|-+.
T Consensus 162 mCKg~Vl~~~~~s~~~~gv~yer~iYvGDG~nD~CP~l~Lr~~D~ampRkgfpl 215 (256)
T KOG3120|consen 162 MCKGLVLDELVASQLKDGVRYERLIYVGDGANDFCPVLRLRACDVAMPRKGFPL 215 (256)
T ss_pred hhhhHHHHHHHHHHhhcCCceeeEEEEcCCCCCcCcchhcccCceecccCCCch
Confidence 34677776665441 2 378999999999 56776666666664444444
No 163
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=89.37 E-value=0.62 Score=46.42 Aligned_cols=89 Identities=16% Similarity=0.146 Sum_probs=59.6
Q ss_pred CcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCcccHHHH
Q 003189 662 RPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTL 741 (840)
Q Consensus 662 R~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~~ 741 (840)
-|+ .+.++.|++. ++..++|+.....+..+-+..|+...-..++..++.. +..| +..+
T Consensus 90 ~~~-~e~L~~L~~~-~~l~I~T~~~~~~~~~~l~~~~l~~~fd~i~~~~~~~------------------~~KP--~p~~ 147 (188)
T PRK10725 90 LPL-IEVVKAWHGR-RPMAVGTGSESAIAEALLAHLGLRRYFDAVVAADDVQ------------------HHKP--APDT 147 (188)
T ss_pred ccH-HHHHHHHHhC-CCEEEEcCCchHHHHHHHHhCCcHhHceEEEehhhcc------------------CCCC--ChHH
Confidence 354 6889999865 8999999999999999999999864322333222211 1122 2223
Q ss_pred HHHHHHhCC---CEEEEEcCCccCHHHhhhCCcc
Q 003189 742 VKHLRTTLG---EVVAVTGDGTNDAPALHEADIG 772 (840)
Q Consensus 742 V~~l~~~~g---~~v~~~GDG~ND~~al~~Advg 772 (840)
.....+++| +.+.|+||..+|+.+-+.|++-
T Consensus 148 ~~~~~~~~~~~~~~~l~igDs~~di~aA~~aG~~ 181 (188)
T PRK10725 148 FLRCAQLMGVQPTQCVVFEDADFGIQAARAAGMD 181 (188)
T ss_pred HHHHHHHcCCCHHHeEEEeccHhhHHHHHHCCCE
Confidence 333322324 4578999999999999999875
No 164
>PLN02645 phosphoglycolate phosphatase
Probab=88.73 E-value=0.91 Score=49.51 Aligned_cols=49 Identities=22% Similarity=0.369 Sum_probs=38.8
Q ss_pred eeecccCCCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHH---HHcCCcc
Q 003189 653 GIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIA---RECGILT 701 (840)
Q Consensus 653 g~~~~~D~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA---~~~Gi~~ 701 (840)
|++.-.+.+=|++.++|+.|++.|++++++|+....+...++ +++|+..
T Consensus 37 Gtl~~~~~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~lGi~~ 88 (311)
T PLN02645 37 GVIWKGDKLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESLGLNV 88 (311)
T ss_pred CCeEeCCccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHCCCCC
Confidence 444445566699999999999999999999999966666666 5678753
No 165
>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []. SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].
Probab=88.49 E-value=1.6 Score=42.05 Aligned_cols=108 Identities=21% Similarity=0.301 Sum_probs=70.4
Q ss_pred eecccCCCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHH---HHHc-----CCccCCCccccChhhhcCCHHHHhhhcC
Q 003189 654 IVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAI---AREC-----GILTDNGIAIEGPEFREKSDEELSKLIP 725 (840)
Q Consensus 654 ~~~~~D~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~i---A~~~-----Gi~~~~~~~~~g~~~~~~~~~~~~~~~~ 725 (840)
+++ +|-.++++.+.++.+++.|+++..+|++....+... -.+. ++. .+.++..++ .+...+.
T Consensus 22 ~~G-~d~~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~Tr~~L~~~~q~~~~lP--~Gpv~~sP~-------~l~~al~ 91 (157)
T PF08235_consen 22 ILG-KDWTHPGAAELYRKIADNGYKILYLTARPIGQANRTRSWLAQHQQQGHNLP--DGPVLLSPD-------SLFSALH 91 (157)
T ss_pred ccC-chhhhhcHHHHHHHHHHCCeEEEEECcCcHHHHHHHHHHHHHHHhCCccCC--CCCEEECCc-------chhhhhh
Confidence 344 479999999999999999999999999996555432 2222 332 222221110 0000000
Q ss_pred CceEEEecCcccHHHHHHHHHHhC----CCEEEEEcCCccCHHHhhhCCcc
Q 003189 726 KIQVMARSSPMDKHTLVKHLRTTL----GEVVAVTGDGTNDAPALHEADIG 772 (840)
Q Consensus 726 ~~~v~ar~~P~~K~~~V~~l~~~~----g~~v~~~GDG~ND~~al~~Advg 772 (840)
+ .+..+-.-+.|...++.++..| ...++..|...+|+.+-++++|-
T Consensus 92 r-Evi~~~p~~fK~~~L~~l~~~f~~~~~pf~agfGN~~tDv~aY~~vGip 141 (157)
T PF08235_consen 92 R-EVISKDPEEFKIACLRDLRALFPPDGNPFYAGFGNRSTDVIAYKAVGIP 141 (157)
T ss_pred c-cccccChHHHHHHHHHHHHHhcCCCCCeEEEecCCcHHHHHHHHHcCCC
Confidence 0 0444434477889999988763 36788899999999999987654
No 166
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=88.26 E-value=0.8 Score=45.56 Aligned_cols=92 Identities=11% Similarity=0.005 Sum_probs=60.8
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEe---cCcc
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMAR---SSPM 736 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar---~~P~ 736 (840)
++.|++.+.+++|+ .++.++|.-+...+..+.+.+|+...-..++.+.+ +-.+ ..|.
T Consensus 84 ~~~~g~~~~L~~L~---~~~~i~Tn~~~~~~~~~l~~~gl~~~fd~i~~~~~-----------------~~~~~~~~KP~ 143 (184)
T TIGR01993 84 KPDPELRNLLLRLP---GRKIIFTNGDRAHARRALNRLGIEDCFDGIFCFDT-----------------ANPDYLLPKPS 143 (184)
T ss_pred CCCHHHHHHHHhCC---CCEEEEeCCCHHHHHHHHHHcCcHhhhCeEEEeec-----------------ccCccCCCCCC
Confidence 46789999999998 47899999999999999999998542222222111 0001 1332
Q ss_pred cHHHHHHHHHHhCC---CEEEEEcCCccCHHHhhhCCccE
Q 003189 737 DKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGL 773 (840)
Q Consensus 737 ~K~~~V~~l~~~~g---~~v~~~GDG~ND~~al~~Advgi 773 (840)
..+.+...+++| +.++|+||...|..+-+.|++-.
T Consensus 144 --p~~~~~~~~~~~~~~~~~l~vgD~~~di~aA~~~G~~~ 181 (184)
T TIGR01993 144 --PQAYEKALREAGVDPERAIFFDDSARNIAAAKALGMKT 181 (184)
T ss_pred --HHHHHHHHHHhCCCccceEEEeCCHHHHHHHHHcCCEE
Confidence 223333222224 56889999999999999888753
No 167
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=86.46 E-value=7.5 Score=41.62 Aligned_cols=49 Identities=18% Similarity=0.224 Sum_probs=35.9
Q ss_pred eeecccCCCCcchHHHHHHHHhCCCEEEEEcCCCHH---HHHHHHHHcCCcc
Q 003189 653 GIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNIN---TAKAIARECGILT 701 (840)
Q Consensus 653 g~~~~~D~lR~~~~~aI~~l~~aGi~v~m~TGD~~~---ta~~iA~~~Gi~~ 701 (840)
|++.-.+.+-|++.++|++|++.|+++.++|+.... ....--+++|+..
T Consensus 11 Gtl~~~~~~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~~~G~~~ 62 (279)
T TIGR01452 11 GVLWLGERVVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKFARLGFNG 62 (279)
T ss_pred CceEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCC
Confidence 344445677889999999999999999999996533 3223336678753
No 168
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=86.41 E-value=1.5 Score=45.30 Aligned_cols=99 Identities=16% Similarity=0.195 Sum_probs=73.5
Q ss_pred cCCCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCccc
Q 003189 658 KDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMD 737 (840)
Q Consensus 658 ~D~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~ 737 (840)
..++.||+.+.+++|++.|+.+...|+-....+..+.+..|+......++.+.+...- .-.|+-
T Consensus 84 ~~~~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~~L~~~gl~~~f~~~v~~~dv~~~----------------KP~Pd~ 147 (221)
T COG0637 84 GLKPIPGVVELLEQLKARGIPLAVASSSPRRAAERVLARLGLLDYFDVIVTADDVARG----------------KPAPDI 147 (221)
T ss_pred CCCCCccHHHHHHHHHhcCCcEEEecCChHHHHHHHHHHccChhhcchhccHHHHhcC----------------CCCCHH
Confidence 3478999999999999999999999999999999999999998755455554442211 123333
Q ss_pred HHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccE
Q 003189 738 KHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGL 773 (840)
Q Consensus 738 K~~~V~~l~~~~g~~v~~~GDG~ND~~al~~Advgi 773 (840)
=+...+.|.-. ...+.++.|..|.+.|-++|+.-+
T Consensus 148 yL~Aa~~Lgv~-P~~CvviEDs~~Gi~Aa~aAGm~v 182 (221)
T COG0637 148 YLLAAERLGVD-PEECVVVEDSPAGIQAAKAAGMRV 182 (221)
T ss_pred HHHHHHHcCCC-hHHeEEEecchhHHHHHHHCCCEE
Confidence 34444443222 467889999999999999999754
No 169
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=86.19 E-value=3.7 Score=43.16 Aligned_cols=50 Identities=14% Similarity=0.082 Sum_probs=40.7
Q ss_pred eeecccCCCCcchHHHHHHHHhCCCEEEEEcC---CCHHHHHHHHHHcCCccC
Q 003189 653 GIVGIKDPMRPGVKESVAICRSAGITVRMVTG---DNINTAKAIARECGILTD 702 (840)
Q Consensus 653 g~~~~~D~lR~~~~~aI~~l~~aGi~v~m~TG---D~~~ta~~iA~~~Gi~~~ 702 (840)
|++.-.+.+-|++.++|++|++.|++++++|| ..........+++|+...
T Consensus 10 Gtl~~~~~~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~~g~~~~ 62 (249)
T TIGR01457 10 GTMYKGKERIPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLASFDIPAT 62 (249)
T ss_pred CceEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCC
Confidence 44444566678999999999999999999996 678888888888998643
No 170
>TIGR01680 Veg_Stor_Prot vegetative storage protein. The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.
Probab=85.30 E-value=3.4 Score=43.48 Aligned_cols=87 Identities=21% Similarity=0.295 Sum_probs=54.0
Q ss_pred cCCCCcchHHHHHHHHhCCCEEEEEcCCCHH----HHHHHHHHcCCccCCCccccChh-hhcCCHHHHhhhcCCceEEEe
Q 003189 658 KDPMRPGVKESVAICRSAGITVRMVTGDNIN----TAKAIARECGILTDNGIAIEGPE-FREKSDEELSKLIPKIQVMAR 732 (840)
Q Consensus 658 ~D~lR~~~~~aI~~l~~aGi~v~m~TGD~~~----ta~~iA~~~Gi~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~v~ar 732 (840)
+.|.=|++.+..+.+++.|++|+++||+... |...+ ++.|+.....+++-+.. -+ ..
T Consensus 143 ~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~r~aT~~NL-~kaGy~~~~~LiLR~~~D~~-----------------~~ 204 (275)
T TIGR01680 143 EAPALPETLKNYNKLVSLGFKIIFLSGRLKDKQAVTEANL-KKAGYHTWEKLILKDPQDNS-----------------AE 204 (275)
T ss_pred cCCCChHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHH-HHcCCCCcceeeecCCCCCc-----------------cc
Confidence 5677789999999999999999999999854 33333 34577532222221110 00 00
Q ss_pred cCcccHHHHHHHHHHhCC-CEEEEEcCCccCH
Q 003189 733 SSPMDKHTLVKHLRTTLG-EVVAVTGDGTNDA 763 (840)
Q Consensus 733 ~~P~~K~~~V~~l~~~~g-~~v~~~GDG~ND~ 763 (840)
....-|...-+.+.+. | ++++.+||..+|.
T Consensus 205 ~av~yKs~~R~~li~e-GYrIv~~iGDq~sDl 235 (275)
T TIGR01680 205 NAVEYKTAARAKLIQE-GYNIVGIIGDQWNDL 235 (275)
T ss_pred hhHHHHHHHHHHHHHc-CceEEEEECCCHHhc
Confidence 0012244444555555 6 6889999999996
No 171
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=84.57 E-value=2.2 Score=45.06 Aligned_cols=49 Identities=29% Similarity=0.388 Sum_probs=38.0
Q ss_pred eeecccCC----CCcchHHHHHHHHhCCCEEEEEcCCCHHH---HHHHHHHcCCcc
Q 003189 653 GIVGIKDP----MRPGVKESVAICRSAGITVRMVTGDNINT---AKAIARECGILT 701 (840)
Q Consensus 653 g~~~~~D~----lR~~~~~aI~~l~~aGi~v~m~TGD~~~t---a~~iA~~~Gi~~ 701 (840)
|++.-.+. +-|++.++|++|+++|++++++||.+..+ .....+++|+..
T Consensus 10 Gtl~~~~~~~~~~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~~g~~~ 65 (257)
T TIGR01458 10 GVLYISDAKSGVAVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQRLGFDI 65 (257)
T ss_pred CeEEeCCCcccCcCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHcCCCC
Confidence 44444555 78899999999999999999999977665 455556678754
No 172
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=84.48 E-value=1.8 Score=46.03 Aligned_cols=52 Identities=15% Similarity=0.177 Sum_probs=43.7
Q ss_pred CC-cchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhh
Q 003189 661 MR-PGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEF 712 (840)
Q Consensus 661 lR-~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~ 712 (840)
+| |++.+++++|+++|+++.++|+-....+...-+++||......++.+.+.
T Consensus 146 irdPgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~lGLd~YFdvIIs~Gdv 198 (301)
T TIGR01684 146 IRDPRIYDSLTELKKRGCILVLWSYGDRDHVVESMRKVKLDRYFDIIISGGHK 198 (301)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCCCcccCEEEECCcc
Confidence 67 99999999999999999999999999999999999998644445544443
No 173
>PRK10444 UMP phosphatase; Provisional
Probab=84.40 E-value=2.6 Score=44.31 Aligned_cols=49 Identities=18% Similarity=0.281 Sum_probs=41.3
Q ss_pred eeecccCCCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHc---CCcc
Q 003189 653 GIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIAREC---GILT 701 (840)
Q Consensus 653 g~~~~~D~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~---Gi~~ 701 (840)
|++.-.+.+-|++.++++.|++.|++++++|+....+...+++++ |+..
T Consensus 10 GtL~~~~~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l~~~G~~~ 61 (248)
T PRK10444 10 GVLMHDNVAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRFATAGVDV 61 (248)
T ss_pred CceEeCCeeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCC
Confidence 555566788999999999999999999999999988887777764 6643
No 174
>PLN02177 glycerol-3-phosphate acyltransferase
Probab=81.73 E-value=6.1 Score=45.84 Aligned_cols=118 Identities=14% Similarity=0.056 Sum_probs=69.7
Q ss_pred CCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHH-cCCccCCCccccChhhhcCCHHHHhhhcCCceEEEe------c
Q 003189 661 MRPGVKESVAICRSAGITVRMVTGDNINTAKAIARE-CGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMAR------S 733 (840)
Q Consensus 661 lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~-~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar------~ 733 (840)
+++++.+.+ ++.|.+ +++|+-...-++.+|++ +|++.- -|.+++.- .+-..-++ +
T Consensus 111 l~~~a~~~~---~~~g~~-vvVSASp~~~Vepfa~~~LGid~V-----IgTeLev~---------~~G~~TG~i~g~~~c 172 (497)
T PLN02177 111 VHPETWRVF---NSFGKR-YIITASPRIMVEPFVKTFLGADKV-----LGTELEVS---------KSGRATGFMKKPGVL 172 (497)
T ss_pred cCHHHHHHH---HhCCCE-EEEECCcHHHHHHHHHHcCCCCEE-----EecccEEC---------cCCEEeeeecCCCCC
Confidence 666655544 567754 99999999999999987 898631 01111100 00011222 2
Q ss_pred CcccHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEEecCCCcH-HH--HhhcCEEeccCCch
Q 003189 734 SPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTE-VA--KESADVIILDDNFS 797 (840)
Q Consensus 734 ~P~~K~~~V~~l~~~~g~~v~~~GDG~ND~~al~~Advgiamg~~g~~-~a--k~~aDivlldd~f~ 797 (840)
.-++|...++..... .......||..||.|||+.||-..+.+.+... .. +--.-+|..|..+.
T Consensus 173 ~Ge~Kv~rl~~~~g~-~~~~~aYgDS~sD~plL~~a~e~y~V~~~~~~~~~~~~~~~~~~fhdgrl~ 238 (497)
T PLN02177 173 VGDHKRDAVLKEFGD-ALPDLGLGDRETDHDFMSICKEGYMVPRTKCEPLPRNKLLSPVIFHEGRLV 238 (497)
T ss_pred ccHHHHHHHHHHhCC-CCceEEEECCccHHHHHHhCCccEEeCCCCCCcCCcccCCCceeeeCCccc
Confidence 335688777643211 11235779999999999999999999842211 11 22345666665543
No 175
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=81.64 E-value=2.6 Score=43.91 Aligned_cols=91 Identities=12% Similarity=0.138 Sum_probs=55.7
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCcccHH
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~ 739 (840)
++-||+.++++.|++. +++.++|.-+.. .+..|+...-..++...+. .+..|. .
T Consensus 113 ~~~~gv~~~L~~L~~~-~~l~i~Tn~~~~-----~~~~gl~~~fd~i~~~~~~------------------~~~KP~--p 166 (238)
T PRK10748 113 DVPQATHDTLKQLAKK-WPLVAITNGNAQ-----PELFGLGDYFEFVLRAGPH------------------GRSKPF--S 166 (238)
T ss_pred CCCccHHHHHHHHHcC-CCEEEEECCCch-----HHHCCcHHhhceeEecccC------------------CcCCCc--H
Confidence 4668999999999975 889999886653 2556764321111111110 111232 3
Q ss_pred HHHHHHHHhCC---CEEEEEcCC-ccCHHHhhhCCccEEec
Q 003189 740 TLVKHLRTTLG---EVVAVTGDG-TNDAPALHEADIGLAMG 776 (840)
Q Consensus 740 ~~V~~l~~~~g---~~v~~~GDG-~ND~~al~~Advgiamg 776 (840)
.+.....+++| +.+.||||. ..|+.+-+.|++-....
T Consensus 167 ~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~A~~aG~~~i~v 207 (238)
T PRK10748 167 DMYHLAAEKLNVPIGEILHVGDDLTTDVAGAIRCGMQACWI 207 (238)
T ss_pred HHHHHHHHHcCCChhHEEEEcCCcHHHHHHHHHCCCeEEEE
Confidence 33333222224 569999999 59999999999865543
No 176
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=81.47 E-value=30 Score=44.17 Aligned_cols=197 Identities=13% Similarity=0.091 Sum_probs=102.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHhHhh----hcCc-eEEE----EECCeEEEEeccCCCCCcEEEecCCCcccccEEEEee
Q 003189 209 SILLVVFVTATSDYKQSLQFKDLDRE----KKKI-TVQV----ARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSG 279 (840)
Q Consensus 209 ~illv~~v~~~~~~~~~~~~~~l~~~----~~~~-~v~V----~RdG~~~~I~~~dLvvGDIV~l~~Gd~VPaDgvll~g 279 (840)
.-.++.+..-.+......++.++... ..+. ...| +.-|....+..-|.+|.|.+.++..+ +=+|=-.+.|
T Consensus 116 i~~~i~~~qe~ka~~~l~~l~~~~~~~~~ViRdg~~~~I~~~~lv~GDiv~l~~Gd~IPaD~~il~~~~-l~VdeS~LTG 194 (997)
T TIGR01106 116 ITGCFSYYQEAKSSKIMESFKNMVPQQALVIRDGEKMSINAEQVVVGDLVEVKGGDRIPADLRIISAQG-CKVDNSSLTG 194 (997)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccCCCeeEEEECCEEEEeeHHHCCCCCEEEECCCCEEeeeEEEEEccC-cEEEccccCC
Confidence 33444555556666666666665331 1121 2222 23588999999999999999998653 4566667777
Q ss_pred cceEEecccccCCCCccccC----CCCCeEEeccEEeeceEEEEEEEEcccchHHHHHHhhcCC-CCCCChHHHHHHHHH
Q 003189 280 FSVLINESSLTGESEPVNVN----ALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEG-GDDETPLQVKLNGVA 354 (840)
Q Consensus 280 ~~l~VDES~LTGES~pv~k~----~~~~~l~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~-~~~~tplq~~l~~~a 354 (840)
++.-|.-..-.-+..|.... .+. .+.+|+...-=...+.=|..|.-. ++++..... ..-+..+.+..+.+.
T Consensus 195 ES~pv~K~~~~~~~~~~~~~n~l~~Gt-~v~~G~~~~~V~~tG~~T~~g~i~---~~~~~~~~~~~pl~~~~~~~~~~~~ 270 (997)
T TIGR01106 195 ESEPQTRSPEFTHENPLETRNIAFFST-NCVEGTARGIVVNTGDRTVMGRIA---SLASGLENGKTPIAIEIEHFIHIIT 270 (997)
T ss_pred CCCceeccCCCcccCccccCCeEEecc-EeeeeeEEEEEEEccccchhhHHH---hhhhhcccCCCcHHHHHHHHHHHHH
Confidence 76444332211111232221 233 477776433222334445555433 333332222 222244555666666
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHhhhcccCCCccccCCcChHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHH
Q 003189 355 TIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAM 428 (840)
Q Consensus 355 ~~~~~~~l~~a~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ai~ilvva~P~~Lplav~l~l~~~~ 428 (840)
.....+++++.++.++.. ..+.. .+...+...++.+-.+.|..++++...+.....
T Consensus 271 ~~~~~~~~~~~~~~~~~~-~~~~~-----------------~~~~~i~v~v~~iP~~L~~~v~i~l~~~~~~m~ 326 (997)
T TIGR01106 271 GVAVFLGVSFFILSLILG-YTWLE-----------------AVIFLIGIIVANVPEGLLATVTVCLTLTAKRMA 326 (997)
T ss_pred HHHHHHHHHHHHHHHHhc-CCHHH-----------------HHHHHHHHHhhcCCccchHHHHHHHHHHHHHHH
Confidence 665555554444433221 11110 122334455555777788888888887765433
No 177
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=81.27 E-value=63 Score=41.59 Aligned_cols=20 Identities=25% Similarity=0.430 Sum_probs=11.8
Q ss_pred CcEEEecCCCcccccEEEEe
Q 003189 259 GDIVHLCMGDQVPADGLFVS 278 (840)
Q Consensus 259 GDIV~l~~Gd~VPaDgvll~ 278 (840)
|....+..-|.+|-|.++++
T Consensus 237 g~~~~I~s~eLvpGDiv~l~ 256 (1054)
T TIGR01657 237 GKWVTIASDELVPGDIVSIP 256 (1054)
T ss_pred CEEEEEEcccCCCCCEEEEe
Confidence 55555556666666666664
No 178
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=80.98 E-value=25 Score=43.44 Aligned_cols=159 Identities=19% Similarity=0.173 Sum_probs=81.5
Q ss_pred ECCeEEEEeccCCCCCcEEEecCCCcccccEEEEeecceEEecccccCCCCccccCCCCCeEEeccEEeeceEEEEEEEE
Q 003189 244 RNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNALNPFLLSGTKVQNGSCKMLVTTV 323 (840)
Q Consensus 244 RdG~~~~I~~~dLvvGDIV~l~~Gd~VPaDgvll~g~~l~VDES~LTGES~pv~k~~~~~~l~sGt~v~~G~~~~~V~~v 323 (840)
.-|....+..-|.+|-|.+.++ |+..=+|=-.+.|++.-|+-. +|. .+ ..+ ..+.+|+-..-=...+.=|..
T Consensus 111 v~GDiV~l~~Gd~IPaDg~vi~-g~~~~VDeS~LTGES~PV~K~--~~~--~v--~aG-T~v~~G~~~~~V~~tG~~T~~ 182 (755)
T TIGR01647 111 VPGDVVRLKIGDIVPADCRLFE-GDYIQVDQAALTGESLPVTKK--TGD--IA--YSG-STVKQGEAEAVVTATGMNTFF 182 (755)
T ss_pred cCCCEEEECCCCEEeceEEEEe-cCceEEEcccccCCccceEec--cCC--ee--ecc-CEEEccEEEEEEEEcCCccHH
Confidence 3588899999999999998885 444555666677776444432 121 11 122 346666644433333333333
Q ss_pred cccchHHHHHHhhcCCCCC-CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhcccCCCccccCCcChHHHHHHHH
Q 003189 324 GMRTQWGKLMATLSEGGDD-ETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFA 402 (840)
Q Consensus 324 G~~T~~g~i~~~~~~~~~~-~tplq~~l~~~a~~~~~~~l~~a~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (840)
|. +.++++........ +..+.+....+......+++++.++.+......+. . .+...+.
T Consensus 183 g~---i~~lv~~~~~~~~~lq~~~~~i~~~~~~~~~~~~~i~~~~~~~~~~~~~~-~----------------~~~~~i~ 242 (755)
T TIGR01647 183 GK---AAALVQSTETGSGHLQKILSKIGLFLIVLIGVLVLIELVVLFFGRGESFR-E----------------GLQFALV 242 (755)
T ss_pred HH---HHHHhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHH-H----------------HHHHHHH
Confidence 32 22444433333222 22233333334333333222222222221111111 0 2334566
Q ss_pred HHHHHHHHhcCCchHHHHHHHHHHHHHH
Q 003189 403 IAVTIVVVAVPEGLPLAVTLSLAFAMKK 430 (840)
Q Consensus 403 ~ai~ilvva~P~~Lplav~l~l~~~~~~ 430 (840)
..+...-.+.|..+|+++.++.....++
T Consensus 243 vlv~a~P~~Lp~~~~~~la~g~~r~ak~ 270 (755)
T TIGR01647 243 LLVGGIPIAMPAVLSVTMAVGAAELAKK 270 (755)
T ss_pred HHHHhCCcchHHHHHHHHHHHHHHHHhC
Confidence 7777888889999999998887665544
No 179
>PLN02151 trehalose-phosphatase
Probab=80.84 E-value=16 Score=40.23 Aligned_cols=64 Identities=17% Similarity=0.260 Sum_probs=45.3
Q ss_pred ccHHHHHHHHHHhCC------CEEEEEcCCccCHHHhhhC-----CccEEecCCCcHHHHhhcCEEeccCCchHHHHHHH
Q 003189 736 MDKHTLVKHLRTTLG------EVVAVTGDGTNDAPALHEA-----DIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAK 804 (840)
Q Consensus 736 ~~K~~~V~~l~~~~g------~~v~~~GDG~ND~~al~~A-----dvgiamg~~g~~~ak~~aDivlldd~f~~i~~~i~ 804 (840)
-+|...|+.|.+.+| ..+.++||-..|-.|++.. ++||-+| .+.. .-.|++.|-+ ...+...+.
T Consensus 268 ~dKG~Av~~Ll~~~~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~Vg-~~~k--~T~A~y~L~d--p~eV~~~L~ 342 (354)
T PLN02151 268 WDKGKALEFLLESLGYANCTDVFPIYIGDDRTDEDAFKILRDKKQGLGILVS-KYAK--ETNASYSLQE--PDEVMEFLE 342 (354)
T ss_pred CCHHHHHHHHHHhcccccCCCCeEEEEcCCCcHHHHHHHHhhcCCCccEEec-cCCC--CCcceEeCCC--HHHHHHHHH
Confidence 489999999887644 2489999999999999853 6777777 2221 2258888754 666665543
No 180
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=80.40 E-value=3.2 Score=44.25 Aligned_cols=50 Identities=20% Similarity=0.149 Sum_probs=41.3
Q ss_pred CC-cchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccCh
Q 003189 661 MR-PGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGP 710 (840)
Q Consensus 661 lR-~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~ 710 (840)
+| |++.+++++|+++|+++.++|+.+...+..+.+.+|+......++.+.
T Consensus 148 irdp~V~EtL~eLkekGikLaIvTNg~Re~v~~~Le~lgL~~yFDvII~~g 198 (303)
T PHA03398 148 IRDPFVYDSLDELKERGCVLVLWSYGNREHVVHSLKETKLEGYFDIIICGG 198 (303)
T ss_pred cCChhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHcCCCccccEEEECC
Confidence 46 899999999999999999999888888899999999975434444333
No 181
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=79.27 E-value=1.7 Score=42.52 Aligned_cols=90 Identities=17% Similarity=0.111 Sum_probs=60.6
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecC-cccH
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSS-PMDK 738 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~-P~~K 738 (840)
..||++.+.+++|.+. +.+++.|-.....|..+...++.... .+.. +++|-+ ...|
T Consensus 42 ~~RPgl~eFL~~l~~~-yei~I~Ts~~~~yA~~il~~ldp~~~---~f~~-------------------~l~r~~~~~~~ 98 (162)
T TIGR02251 42 FKRPHVDEFLERVSKW-YELVIFTASLEEYADPVLDILDRGGK---VISR-------------------RLYRESCVFTN 98 (162)
T ss_pred EECCCHHHHHHHHHhc-CEEEEEcCCcHHHHHHHHHHHCcCCC---EEeE-------------------EEEccccEEeC
Confidence 4799999999999988 99999999999999999999886421 0000 112111 1111
Q ss_pred HHHHHHHHHhCC---CEEEEEcCCccCHHHhhhCCccE
Q 003189 739 HTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGL 773 (840)
Q Consensus 739 ~~~V~~l~~~~g---~~v~~~GDG~ND~~al~~Advgi 773 (840)
..+++.|..- | ..|.|+||...|..+-.++.|=+
T Consensus 99 ~~~~K~L~~l-~~~~~~vIiVDD~~~~~~~~~~NgI~i 135 (162)
T TIGR02251 99 GKYVKDLSLV-GKDLSKVIIIDNSPYSYSLQPDNAIPI 135 (162)
T ss_pred CCEEeEchhc-CCChhhEEEEeCChhhhccCccCEeec
Confidence 1144445433 3 56899999998877666554443
No 182
>PF00403 HMA: Heavy-metal-associated domain; InterPro: IPR006121 Proteins that transport heavy metals in micro-organisms and mammals share similarities in their sequences and structures. These proteins provide an important focus for research, some being involved in bacterial resistance to toxic metals, such as lead and cadmium, while others are involved in inherited human syndromes, such as Wilson's and Menke's diseases []. A conserved domain has been found in a number of these heavy metal transport or detoxification proteins []. The domain, which has been termed Heavy-Metal-Associated (HMA), contains two conserved cysteines that are probably involved in metal binding. Structure solution of the fourth HMA domain of the Menke's copper transporting ATPase shows a well-defined structure comprising a four-stranded antiparallel beta-sheet and two alpha helices packed in an alpha-beta sandwich fold []. This fold is common to other domains and is classified as "ferredoxin-like".; GO: 0046872 metal ion binding, 0030001 metal ion transport; PDB: 2VOY_A 1P6T_A 1KQK_A 2RML_A 1JWW_A 3K7R_F 1FES_A 1CC8_A 1FD8_A 2GGP_A ....
Probab=79.05 E-value=0.15 Score=40.86 Aligned_cols=54 Identities=11% Similarity=0.201 Sum_probs=45.2
Q ss_pred hhccchhhhHHHHHhhhhhhhhHhHhhhhhhhhhhcccCCCCccccccccccCCcc
Q 003189 42 TANLSKRFEAEAIRRSNQEKFRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQ 97 (840)
Q Consensus 42 ~~~~~~~~e~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 97 (840)
+..|.++.++.+.+.+++.++.+++...++.+.|... ..+...+.+.++++||.
T Consensus 9 C~~C~~~v~~~l~~~~GV~~v~vd~~~~~v~v~~~~~--~~~~~~i~~~i~~~Gy~ 62 (62)
T PF00403_consen 9 CEGCAKKVEKALSKLPGVKSVKVDLETKTVTVTYDPD--KTSIEKIIEAIEKAGYE 62 (62)
T ss_dssp SHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEESTT--TSCHHHHHHHHHHTTSE
T ss_pred cHHHHHHHHHHHhcCCCCcEEEEECCCCEEEEEEecC--CCCHHHHHHHHHHhCcC
Confidence 3456788899999999999999999999999999766 45567888888888884
No 183
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=77.84 E-value=4.9 Score=39.00 Aligned_cols=88 Identities=22% Similarity=0.333 Sum_probs=61.0
Q ss_pred CCcchHHHHHHHHhCCCEEEEEcCCCHH----HHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCc-
Q 003189 661 MRPGVKESVAICRSAGITVRMVTGDNIN----TAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSP- 735 (840)
Q Consensus 661 lR~~~~~aI~~l~~aGi~v~m~TGD~~~----ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P- 735 (840)
+++=+++.|..-++.|=.+..+||+... ++..+|+...|...+.. .|+...|
T Consensus 115 PKevA~qLI~MHq~RGD~i~FvTGRt~gk~d~vsk~Lak~F~i~~m~pv-----------------------~f~Gdk~k 171 (237)
T COG3700 115 PKEVARQLIDMHQRRGDAIYFVTGRTPGKTDTVSKTLAKNFHITNMNPV-----------------------IFAGDKPK 171 (237)
T ss_pred hHHHHHHHHHHHHhcCCeEEEEecCCCCcccccchhHHhhcccCCCcce-----------------------eeccCCCC
Confidence 3445688888888999999999999854 55667777777543322 4444444
Q ss_pred ccHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCc-cE
Q 003189 736 MDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADI-GL 773 (840)
Q Consensus 736 ~~K~~~V~~l~~~~g~~v~~~GDG~ND~~al~~Adv-gi 773 (840)
-.+..-...+|++ .+-..-||+.||.-|-++|++ ||
T Consensus 172 ~~qy~Kt~~i~~~--~~~IhYGDSD~Di~AAkeaG~RgI 208 (237)
T COG3700 172 PGQYTKTQWIQDK--NIRIHYGDSDNDITAAKEAGARGI 208 (237)
T ss_pred cccccccHHHHhc--CceEEecCCchhhhHHHhcCccce
Confidence 1233445566665 445677999999999999986 44
No 184
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=77.68 E-value=6.7 Score=36.48 Aligned_cols=32 Identities=16% Similarity=0.163 Sum_probs=28.7
Q ss_pred CCCCcchHHHHHHHHhCCCEEEEEcCCCHHHH
Q 003189 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTA 690 (840)
Q Consensus 659 D~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta 690 (840)
+++.+++.++++.+++.|+.++++||++....
T Consensus 23 ~~~~~~~ie~L~~l~~~G~~IiiaTGR~~~~~ 54 (126)
T TIGR01689 23 VAPILAVIEKLRHYKALGFEIVISSSRNMRTY 54 (126)
T ss_pred cccCHHHHHHHHHHHHCCCEEEEECCCCchhh
Confidence 67899999999999999999999999986543
No 185
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=77.25 E-value=8.8 Score=38.05 Aligned_cols=96 Identities=26% Similarity=0.335 Sum_probs=59.3
Q ss_pred CCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHH---HHhhh---cCCceEEEecC
Q 003189 661 MRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDE---ELSKL---IPKIQVMARSS 734 (840)
Q Consensus 661 lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~---~~~~~---~~~~~v~ar~~ 734 (840)
+.|++.+++..++++|++++|+|- +-||... -.++.+|..+... .+.+. ++.+ .+|.-.
T Consensus 32 ~~~g~i~al~~l~~~gy~lVvvTN-----------QsGi~rg---yf~~~~f~~~~~~m~~~l~~~gv~id~i-~~Cph~ 96 (181)
T COG0241 32 FIPGVIPALLKLQRAGYKLVVVTN-----------QSGIGRG---YFTEADFDKLHNKMLKILASQGVKIDGI-LYCPHH 96 (181)
T ss_pred cCccHHHHHHHHHhCCCeEEEEEC-----------CCCcccc---CccHHHHHHHHHHHHHHHHHcCCccceE-EECCCC
Confidence 468999999999999999999996 3344321 2223333322211 11111 1111 444444
Q ss_pred ccc-------H-HHHHHHHHHhCC---CEEEEEcCCccCHHHhhhCCcc
Q 003189 735 PMD-------K-HTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIG 772 (840)
Q Consensus 735 P~~-------K-~~~V~~l~~~~g---~~v~~~GDG~ND~~al~~Advg 772 (840)
|++ | ..+.+.+++. + ....||||-..|..+-..|++.
T Consensus 97 p~~~c~cRKP~~gm~~~~~~~~-~iD~~~s~~VGD~~~Dlq~a~n~gi~ 144 (181)
T COG0241 97 PEDNCDCRKPKPGMLLSALKEY-NIDLSRSYVVGDRLTDLQAAENAGIK 144 (181)
T ss_pred CCCCCcccCCChHHHHHHHHHh-CCCccceEEecCcHHHHHHHHHCCCC
Confidence 543 3 3444455544 6 6789999999999999988886
No 186
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=75.69 E-value=10 Score=44.23 Aligned_cols=40 Identities=18% Similarity=0.292 Sum_probs=32.8
Q ss_pred CCcchHHHHHHHHhCCCEEEEEcCCCH------------HHHHHHHHHcCCc
Q 003189 661 MRPGVKESVAICRSAGITVRMVTGDNI------------NTAKAIARECGIL 700 (840)
Q Consensus 661 lR~~~~~aI~~l~~aGi~v~m~TGD~~------------~ta~~iA~~~Gi~ 700 (840)
+-|++.++++.|+++|++++++|.-.. ..+.++.+++|+.
T Consensus 198 l~pgV~e~L~~L~~~Gy~IvIvTNQ~gI~~G~~~~~~~~~ki~~iL~~lgip 249 (526)
T TIGR01663 198 IFPEIPEKLKELEADGFKICIFTNQGGIARGKINADDFKAKIEAIVAKLGVP 249 (526)
T ss_pred cccCHHHHHHHHHHCCCEEEEEECCcccccCcccHHHHHHHHHHHHHHcCCc
Confidence 469999999999999999999998544 3466777777774
No 187
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=75.58 E-value=61 Score=41.01 Aligned_cols=36 Identities=25% Similarity=0.333 Sum_probs=23.6
Q ss_pred CCeEEEEeccCCCCCcEEEecCCCcccccEEEEeecc
Q 003189 245 NGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFS 281 (840)
Q Consensus 245 dG~~~~I~~~dLvvGDIV~l~~Gd~VPaDgvll~g~~ 281 (840)
=|....+...|.+|-|.+.++.. .+=+|=-.+.|++
T Consensus 93 ~GDiv~l~~Gd~IPaD~~ll~~~-~l~VdeS~LTGES 128 (917)
T TIGR01116 93 PGDIVELAVGDKVPADIRVLSLK-TLRVDQSILTGES 128 (917)
T ss_pred CCCEEEECCCCEeeccEEEEEec-ceEEEcccccCCC
Confidence 47777788888888888877654 2334555555555
No 188
>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]
Probab=74.13 E-value=15 Score=38.78 Aligned_cols=136 Identities=20% Similarity=0.231 Sum_probs=83.8
Q ss_pred eeeecccCCCCcchHHHHHHHHhC-CCEEEEEcCCCHHHHHHHHHHcCC--ccCCCccc---cChhhhcCC---------
Q 003189 652 IGIVGIKDPMRPGVKESVAICRSA-GITVRMVTGDNINTAKAIARECGI--LTDNGIAI---EGPEFREKS--------- 716 (840)
Q Consensus 652 lg~~~~~D~lR~~~~~aI~~l~~a-Gi~v~m~TGD~~~ta~~iA~~~Gi--~~~~~~~~---~g~~~~~~~--------- 716 (840)
+..--...++-++..+.++.|... ...++++||...........-.|| ..+++..+ +|.......
T Consensus 32 i~~~p~~a~~~~~l~~lL~~Las~~~~~v~iiSGR~~~~l~~~~~v~~i~l~aehGa~~r~~~g~~~~~~~~~~~~~~~~ 111 (266)
T COG1877 32 IVPHPEAAVPDDRLLSLLQDLASDPRNVVAIISGRSLAELERLFGVPGIGLIAEHGAEVRDPNGKWWINLAEEADLRWLK 111 (266)
T ss_pred cccCccccCCCHHHHHHHHHHHhcCCCeEEEEeCCCHHHHHHhcCCCCccEEEecceEEecCCCCeeEecCHHHHhhHHH
Confidence 344445667788889999999988 457999999999988887763333 22222111 222211111
Q ss_pred ---------------------------------HHH-----Hh---hh---------cCCceEEEecCcccHHHHHHHHH
Q 003189 717 ---------------------------------DEE-----LS---KL---------IPKIQVMARSSPMDKHTLVKHLR 746 (840)
Q Consensus 717 ---------------------------------~~~-----~~---~~---------~~~~~v~ar~~P~~K~~~V~~l~ 746 (840)
+++ +. .. ..+..|..|.+-..|...++.+.
T Consensus 112 ~v~~~l~~~v~r~pGs~iE~K~~a~~~Hyr~a~~~~~~~~a~~~~~~~~~~~~~~v~~gk~vVEvrp~~~~KG~a~~~i~ 191 (266)
T COG1877 112 EVAAILEYYVERTPGSYIERKGFAVALHYRNAEDDEGAALALAEAATLINELKLRVTPGKMVVELRPPGVSKGAAIKYIM 191 (266)
T ss_pred HHHHHHHHHhhcCCCeEEEEcCcEEEEeeccCCchhhHHHHHHHHHhccccccEEEEeCceEEEEeeCCcchHHHHHHHH
Confidence 100 00 00 01223555666677999999776
Q ss_pred HhCC---CEEEEEcCCccCHHHhhhCC----ccEEecCCCcHHHHhhcC
Q 003189 747 TTLG---EVVAVTGDGTNDAPALHEAD----IGLAMGIAGTEVAKESAD 788 (840)
Q Consensus 747 ~~~g---~~v~~~GDG~ND~~al~~Ad----vgiamg~~g~~~ak~~aD 788 (840)
+..+ ..+...||..-|-.|++..+ ++|-+| -++..|+...+
T Consensus 192 ~~~~~~~~~~~~aGDD~TDE~~F~~v~~~~~~~v~v~-~~~t~a~~~~~ 239 (266)
T COG1877 192 DELPFDGRFPIFAGDDLTDEDAFAAVNKLDSITVKVG-VGSTQAKFRLA 239 (266)
T ss_pred hcCCCCCCcceecCCCCccHHHHHhhccCCCceEEec-CCccccccccc
Confidence 6533 35889999999999999887 556666 44333444333
No 189
>PF05822 UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); InterPro: IPR006434 This family is a small group of metazoan sequences with sequences from Arabidopsis thaliana (Mouse-ear cress) and rice. The sequences represent pyrimidine 5-nucleotidases, apparently in reference to HSPC233, the Homo sapiens (Human) homologue []. The structure of mouse sequence has been reported []. This group of sequences was originally found during searches for members of the haloacid dehalogenase (HAD) superfamily (IPR005834 from INTERPRO). All of the conserved catalytic motifs [] are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches of that subfamily (IA-ID) as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.; GO: 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0005737 cytoplasm; PDB: 2BDU_B 2G07_A 2G06_A 2G0A_A 2Q4T_A 2G09_A 2G08_A 2VKQ_A 2CN1_A 2JGA_A.
Probab=73.71 E-value=6.7 Score=40.78 Aligned_cols=133 Identities=17% Similarity=0.243 Sum_probs=69.7
Q ss_pred CCCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEec----C
Q 003189 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARS----S 734 (840)
Q Consensus 659 D~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~----~ 734 (840)
-.+|+++.+.++.|++.+|.+.++|+-=-.....+-++-|...++-.+++.. ..++++. .+.+=. .
T Consensus 89 i~LRdg~~~~f~~L~~~~IP~lIFSAGlgdvI~~vL~q~~~~~~Nv~VvSN~--M~Fd~~g--------~l~gF~~~lIH 158 (246)
T PF05822_consen 89 IMLRDGVEEFFDKLEEHNIPLLIFSAGLGDVIEEVLRQAGVFHPNVKVVSNF--MDFDEDG--------VLVGFKGPLIH 158 (246)
T ss_dssp --B-BTHHHHHHHHHCTT--EEEEEEEEHHHHHHHHHHTT--BTTEEEEEE---EEE-TTS--------BEEEE-SS---
T ss_pred hhhhcCHHHHHHHHHhcCCCEEEEeCCcHHHHHHHHHHcCCCCCCeEEEeee--EEECCcc--------eEeecCCCceE
Confidence 4689999999999999999999999877777777777778766543333210 0000000 000000 1
Q ss_pred cccHHH-------HHHHHHHhCCCEEEEEcCCccCHHHhhhC-Cc--cEEecC--CCcH----HHHhhcCEEeccCCchH
Q 003189 735 PMDKHT-------LVKHLRTTLGEVVAVTGDGTNDAPALHEA-DI--GLAMGI--AGTE----VAKESADVIILDDNFST 798 (840)
Q Consensus 735 P~~K~~-------~V~~l~~~~g~~v~~~GDG~ND~~al~~A-dv--giamg~--~g~~----~ak~~aDivlldd~f~~ 798 (840)
+-.|-. .-+.++. ...|...||..-|+.|-... +. -+..|- ...| .-+++=||||.+|.=-.
T Consensus 159 ~~NKn~~~l~~~~~~~~~~~--R~NvlLlGDslgD~~Ma~G~~~~~~~lkIGFLn~~ve~~l~~Y~~~yDIVlv~D~tm~ 236 (246)
T PF05822_consen 159 TFNKNESALEDSPYFKQLKK--RTNVLLLGDSLGDLHMADGVPDEENVLKIGFLNDKVEENLEKYLEAYDIVLVDDQTMD 236 (246)
T ss_dssp TT-HHHHHHTTHHHHHCTTT----EEEEEESSSGGGGTTTT-S--SEEEEEEEE-SSHHHHHHHHHCCSSEEEET--B-H
T ss_pred EeeCCcccccCchHHHHhcc--CCcEEEecCccCChHhhcCCCccccEEEEEecccCHHHHHHHHHhcCCEEEECCCCch
Confidence 122322 1222332 26789999999999998666 22 233331 1122 35678999999997666
Q ss_pred HHHHH
Q 003189 799 IVTVA 803 (840)
Q Consensus 799 i~~~i 803 (840)
++..|
T Consensus 237 v~~~i 241 (246)
T PF05822_consen 237 VPNAI 241 (246)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 66554
No 190
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=72.54 E-value=2.9 Score=41.03 Aligned_cols=84 Identities=12% Similarity=0.062 Sum_probs=52.5
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCcccH-
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK- 738 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K- 738 (840)
++.||+.++++. +.++|.-+........+.+|+...-..++.+++. ....|.-.
T Consensus 90 ~~~~g~~~~L~~-------~~i~Tn~~~~~~~~~l~~~~l~~~fd~v~~~~~~------------------~~~KP~p~~ 144 (175)
T TIGR01493 90 PPWPDSAAALAR-------VAILSNASHWAFDQFAQQAGLPWYFDRAFSVDTV------------------RAYKPDPVV 144 (175)
T ss_pred CCCCchHHHHHH-------HhhhhCCCHHHHHHHHHHCCCHHHHhhhccHhhc------------------CCCCCCHHH
Confidence 578999999983 6789998888888888999986432222222221 11123222
Q ss_pred -HHHHHHHHHhCCCEEEEEcCCccCHHHhhhC
Q 003189 739 -HTLVKHLRTTLGEVVAVTGDGTNDAPALHEA 769 (840)
Q Consensus 739 -~~~V~~l~~~~g~~v~~~GDG~ND~~al~~A 769 (840)
....+.+.-. .+.+.||||...|+.+-+++
T Consensus 145 f~~~~~~~~~~-p~~~l~vgD~~~Di~~A~~~ 175 (175)
T TIGR01493 145 YELVFDTVGLP-PDRVLMVAAHQWDLIGARKF 175 (175)
T ss_pred HHHHHHHHCCC-HHHeEeEecChhhHHHHhcC
Confidence 2222333212 26799999999998876653
No 191
>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3.1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.
Probab=69.78 E-value=6.5 Score=40.88 Aligned_cols=64 Identities=23% Similarity=0.328 Sum_probs=33.2
Q ss_pred EEEecCcccHHHHHHHHHHhCC------CEEEEEcCCccCHHHhhhC------CccEEecCCCc-HHHHhhcCEEecc
Q 003189 729 VMARSSPMDKHTLVKHLRTTLG------EVVAVTGDGTNDAPALHEA------DIGLAMGIAGT-EVAKESADVIILD 793 (840)
Q Consensus 729 v~ar~~P~~K~~~V~~l~~~~g------~~v~~~GDG~ND~~al~~A------dvgiamg~~g~-~~ak~~aDivlld 793 (840)
|-.|..-..|...|+.|.+..+ ..++++||...|-+|++.. ++++.+| ... ..-..+|++-|.|
T Consensus 157 vEvrp~~~~KG~av~~ll~~~~~~~~~~~~~l~~GDD~tDE~~f~~~~~~~~~~~~i~V~-~~~~~~~~t~A~y~l~~ 233 (235)
T PF02358_consen 157 VEVRPPGVNKGSAVRRLLEELPFAGPKPDFVLYIGDDRTDEDAFRALRELEEGGFGIKVG-SVSVGEKPTAASYRLDD 233 (235)
T ss_dssp EEEE-TT--HHHHHHHHHTTS---------EEEEESSHHHHHHHHTTTTS----EEEEES------------------
T ss_pred EEEEeCCCChHHHHHHHHHhcCccccccceeEEecCCCCCHHHHHHHHhcccCCCCeEEE-eeccccccccccccccc
Confidence 4445555669999999887754 3699999999999999763 5677777 332 2233456665544
No 192
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=69.56 E-value=1.3e+02 Score=37.88 Aligned_cols=156 Identities=15% Similarity=0.080 Sum_probs=77.9
Q ss_pred CCeEEEEeccCCCCCcEEEecCCCcccccEEEEeecceEEeccccc---CCCCcccc----CCCCCeEEeccEEeeceEE
Q 003189 245 NGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLT---GESEPVNV----NALNPFLLSGTKVQNGSCK 317 (840)
Q Consensus 245 dG~~~~I~~~dLvvGDIV~l~~Gd~VPaDgvll~g~~l~VDES~LT---GES~pv~k----~~~~~~l~sGt~v~~G~~~ 317 (840)
-|....+..-|.+|-|.+.++ |..+=+|=-.+.|++.-|+-..-. .+..+... ..+. .+.+|+-..-=..+
T Consensus 185 pGDiV~l~~Gd~IPaDg~li~-g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT-~V~~G~~~~vV~at 262 (902)
T PRK10517 185 PGDIIKLAAGDMIPADLRILQ-ARDLFVAQASLTGESLPVEKFATTRQPEHSNPLECDTLCFMGT-NVVSGTAQAVVIAT 262 (902)
T ss_pred CCCEEEECCCCEEeeeEEEEE-cCceEEEecCcCCCCCceecccccccccccCccccccceeeCc-eEeeeeEEEEEEEe
Confidence 588899999999999998887 444567777777877545443221 11111111 1344 57777754433333
Q ss_pred EEEEEEcccchHHHHHHhhcCCCCC-CChHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhcccCCCccccCCcC
Q 003189 318 MLVTTVGMRTQWGKLMATLSEGGDD-ETPLQV---KLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDD 393 (840)
Q Consensus 318 ~~V~~vG~~T~~g~i~~~~~~~~~~-~tplq~---~l~~~a~~~~~~~l~~a~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 393 (840)
+.=|..|.= .+.+....+.... +..+.+ .+-.++..+..+.++++.+...-|.-
T Consensus 263 G~~T~~GkI---~~~v~~~~~~~t~lq~~~~~i~~~l~~~~~~~~~~v~~i~~~~~~~~~~------------------- 320 (902)
T PRK10517 263 GANTWFGQL---AGRVSEQDSEPNAFQQGISRVSWLLIRFMLVMAPVVLLINGYTKGDWWE------------------- 320 (902)
T ss_pred ccccHHHHH---HHHhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhHHHHhcCCHHH-------------------
Confidence 333333322 2333322222211 122222 22233333443333333221111110
Q ss_pred hHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHH
Q 003189 394 ALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAF 426 (840)
Q Consensus 394 ~~~~~~~~~~ai~ilvva~P~~Lplav~l~l~~ 426 (840)
.+...+..++...-.+.|..+++++..+...
T Consensus 321 --~l~~alsv~V~~~Pe~LP~~vt~~la~g~~~ 351 (902)
T PRK10517 321 --AALFALSVAVGLTPEMLPMIVTSTLARGAVK 351 (902)
T ss_pred --HHHHHHHHHHHHcccHHHHHHHHHHHHHHHH
Confidence 1233455667777777788888888777544
No 193
>PF00389 2-Hacid_dh: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; InterPro: IPR006139 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. The catalytic domain contains a number of conserved charged residues which may play a role in the catalytic mechanism. The NAD-binding domain is described in IPR006140 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0008152 metabolic process, 0055114 oxidation-reduction process; PDB: 2DLD_A 2G76_B 3DC2_B 1YGY_B 3DDN_A 3KB6_B 3K5P_A 3EVT_A 1WWK_B 1GDH_A ....
Probab=69.11 E-value=83 Score=29.20 Aligned_cols=118 Identities=17% Similarity=0.220 Sum_probs=66.8
Q ss_pred ccCCCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCc-
Q 003189 657 IKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSP- 735 (840)
Q Consensus 657 ~~D~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P- 735 (840)
+-+++.++..+.+++ |+.+.+...-.........+.+.. ++++..+
T Consensus 3 i~~~~~~~~~~~l~~----~~~v~~~~~~~~~~~~~~l~~~d~-----------------------------ii~~~~~~ 49 (133)
T PF00389_consen 3 ITDPLPDEEIERLEE----GFEVEFCDSPSEEELAERLKDADA-----------------------------IIVGSGTP 49 (133)
T ss_dssp ESSS-SHHHHHHHHH----TSEEEEESSSSHHHHHHHHTTESE-----------------------------EEESTTST
T ss_pred EeccCCHHHHHHHHC----CceEEEeCCCCHHHHHHHhCCCeE-----------------------------EEEcCCCC
Confidence 345666555555555 778887774444433333333222 4455555
Q ss_pred ccHHHHHHHHHHhCCCEEEEEcCCcc--CHHHhhhCCccEEecCCCcHHHHhhcCEEeccCCchHHHHHHHHHHHHHHHH
Q 003189 736 MDKHTLVKHLRTTLGEVVAVTGDGTN--DAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINI 813 (840)
Q Consensus 736 ~~K~~~V~~l~~~~g~~v~~~GDG~N--D~~al~~Advgiamg~~g~~~ak~~aDivlldd~f~~i~~~i~~gR~~~~~i 813 (840)
-+ ..+++.+.. =+.+...|-|.| |.+++++-+|-++-. .|. .+...|+++ +.+--..-+.++.+.+|+
T Consensus 50 ~~-~~~l~~~~~--Lk~I~~~~~G~d~id~~~a~~~gI~V~n~-~g~-~~~aVAE~a-----~~T~e~~~~~~~~~~~ni 119 (133)
T PF00389_consen 50 LT-AEVLEAAPN--LKLISTAGAGVDNIDLEAAKERGIPVTNV-PGY-NAEAVAEHA-----GYTDEARERMAEIAAENI 119 (133)
T ss_dssp BS-HHHHHHHTT---SEEEESSSSCTTB-HHHHHHTTSEEEE--TTT-THHHHHHHH-----TGBHHHHHHHHHHHHHHH
T ss_pred cC-HHHHhccce--eEEEEEcccccCcccHHHHhhCeEEEEEe-CCc-CCcchhccc-----hhHHHHHHHHHHHHHHHH
Confidence 44 445566632 277888999998 888999888888654 221 122233333 444444566677777787
Q ss_pred HHHH
Q 003189 814 QKFV 817 (840)
Q Consensus 814 ~k~i 817 (840)
+.|+
T Consensus 120 ~~~l 123 (133)
T PF00389_consen 120 ERFL 123 (133)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7765
No 194
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=65.35 E-value=97 Score=38.96 Aligned_cols=158 Identities=11% Similarity=0.011 Sum_probs=79.0
Q ss_pred CCeEEEEeccCCCCCcEEEecCCCcccccEEEEeecceEEeccccc--CCCCcc-c----cCCCCCeEEeccEEeeceEE
Q 003189 245 NGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLT--GESEPV-N----VNALNPFLLSGTKVQNGSCK 317 (840)
Q Consensus 245 dG~~~~I~~~dLvvGDIV~l~~Gd~VPaDgvll~g~~l~VDES~LT--GES~pv-~----k~~~~~~l~sGt~v~~G~~~ 317 (840)
-|....+..-|.+|-|.+.++ |.-+=+|=-.+.|++.-|+-..-+ .+..|. . ...+. .+.+|.-..-=..+
T Consensus 151 ~GDiV~l~~Gd~VPaDg~li~-g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT-~v~~G~~~~~V~~t 228 (867)
T TIGR01524 151 PGDLIELAAGDIIPADARVIS-ARDLFINQSALTGESLPVEKFVEDKRARDPEILERENLCFMGT-NVLSGHAQAVVLAT 228 (867)
T ss_pred CCCEEEECCCCEEcccEEEEe-cCceEEEcccccCCCCcccccCCccccccccccccccceecCC-eEEEeEEEEEEEEE
Confidence 588899999999999999887 444566777788887544333211 011111 1 12333 57777654433333
Q ss_pred EEEEEEcccchHHHHHHhhcCCCCCCCh---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhcccCCCccccCCcCh
Q 003189 318 MLVTTVGMRTQWGKLMATLSEGGDDETP---LQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDA 394 (840)
Q Consensus 318 ~~V~~vG~~T~~g~i~~~~~~~~~~~tp---lq~~l~~~a~~~~~~~l~~a~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 394 (840)
+.=|..|.=. +.+..-.....-+.. +.+.+-.++..+..+.+++..+...-|. .
T Consensus 229 G~~T~~gki~---~~v~~~~~~t~lq~~~~~i~~~~~~~~~~~~~i~~~~~~~~~~~~~-~------------------- 285 (867)
T TIGR01524 229 GSSTWFGSLA---IAATERRGQTAFDKGVKSVSKLLIRFMLVMVPVVLMINGLMKGDWL-E------------------- 285 (867)
T ss_pred cCccHHHHHH---HHhhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHheehHHHhcCCHH-H-------------------
Confidence 3333333221 222112222221122 2333333444444333333221111111 0
Q ss_pred HHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHH
Q 003189 395 LEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAM 428 (840)
Q Consensus 395 ~~~~~~~~~ai~ilvva~P~~Lplav~l~l~~~~ 428 (840)
.+...+..++..+-.+.|..+++++..+.....
T Consensus 286 -~~~~al~l~v~~iP~~Lp~~vt~~la~g~~~ma 318 (867)
T TIGR01524 286 -AFLFALAVAVGLTPEMLPMIVSSNLAKGAINMS 318 (867)
T ss_pred -HHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHH
Confidence 123445567777777788888888888764433
No 195
>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase. A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.
Probab=65.22 E-value=11 Score=41.51 Aligned_cols=106 Identities=16% Similarity=0.113 Sum_probs=65.2
Q ss_pred CcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHc-C-------CccCCCccccC----------hhhhcCCHHHHhhh
Q 003189 662 RPGVKESVAICRSAGITVRMVTGDNINTAKAIAREC-G-------ILTDNGIAIEG----------PEFREKSDEELSKL 723 (840)
Q Consensus 662 R~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~-G-------i~~~~~~~~~g----------~~~~~~~~~~~~~~ 723 (840)
-|++.+.++.|+++|+++.++|+-....+..+.+.+ | +..--+.++.+ ..|+....+.-...
T Consensus 186 ~pgl~elL~~Lr~~G~klfLvTNS~~~yt~~im~~l~g~~~~~~~w~~yFD~IIt~a~KP~FF~~~~pf~~v~~~~g~~~ 265 (343)
T TIGR02244 186 DPKLPLFLSKLKEHGKKLFLLTNSDYDYTDKGMKYLLGPFLGEHDWRDYFDVVIVDARKPGFFTEGRPFRQVDVETGSLK 265 (343)
T ss_pred chhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhhCCcccccchHhhCcEEEeCCCCCcccCCCCceEEEeCCCCccc
Confidence 479999999999999999999999999999999996 6 43322333333 22332222110000
Q ss_pred ------cCCceEEEecCcccHHHHHHHHHHhCCCEEEEEcCCc-cCHHHhh-hCCc
Q 003189 724 ------IPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGT-NDAPALH-EADI 771 (840)
Q Consensus 724 ------~~~~~v~ar~~P~~K~~~V~~l~~~~g~~v~~~GDG~-ND~~al~-~Adv 771 (840)
+.+-+|+..=+- ..+-+.+.-. |+.|+++||.. .|.-.-+ .++.
T Consensus 266 ~~~~~~l~~g~vY~gGn~---~~~~~~l~~~-~~~vlYvGD~i~~Di~~~kk~~Gw 317 (343)
T TIGR02244 266 WGEVDGLEPGKVYSGGSL---KQFHELLKWR-GKEVLYFGDHIYGDLLRSKKKRGW 317 (343)
T ss_pred CCccccccCCCeEeCCCH---HHHHHHHCCC-CCcEEEECCcchHHHHhhHHhcCc
Confidence 122234443222 2334444445 88999999985 4766655 5554
No 196
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=65.02 E-value=1.4e+02 Score=37.80 Aligned_cols=159 Identities=13% Similarity=0.073 Sum_probs=88.8
Q ss_pred CCeEEEEeccCCCCCcEEEecCCCcccccEEEEeecceEEecccc------------cCCCCcc-cc----CCCCCeEEe
Q 003189 245 NGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSL------------TGESEPV-NV----NALNPFLLS 307 (840)
Q Consensus 245 dG~~~~I~~~dLvvGDIV~l~~Gd~VPaDgvll~g~~l~VDES~L------------TGES~pv-~k----~~~~~~l~s 307 (840)
-|....+..-|.+|-|.+.++. ..+=+|=-.+.|++.-|+-... .++..+. .+ ..+. .+.+
T Consensus 174 ~GDiV~l~~Gd~IPaDg~li~g-~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~~~~~~~~~~~n~vfaGT-~V~~ 251 (903)
T PRK15122 174 PGDIVHLSAGDMIPADVRLIES-RDLFISQAVLTGEALPVEKYDTLGAVAGKSADALADDEGSLLDLPNICFMGT-NVVS 251 (903)
T ss_pred CCCEEEECCCCEEeeeEEEEEc-CceEEEccccCCCCcceeeeccccccccccccccccccCCcccccceEEeCC-EEEe
Confidence 5889999999999999998874 3455677777787755554432 1222111 11 2333 5777
Q ss_pred ccEEeeceEEEEEEEEcccchHHHHHHhhcCCCC---CCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhcccCC
Q 003189 308 GTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGD---DETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEG 384 (840)
Q Consensus 308 Gt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~---~~tplq~~l~~~a~~~~~~~l~~a~~~~~v~~~~~~~~~~~~~ 384 (840)
|+...-=...+.=|..|.=. +++..-..... +-.++.+.+..++.++.++.++++.+...-+. .
T Consensus 252 G~~~~~V~atG~~T~~gkI~---~~v~~~~~~t~l~~~l~~i~~~l~~~~~~~~~~v~~~~~~~~~~~~-~--------- 318 (903)
T PRK15122 252 GTATAVVVATGSRTYFGSLA---KSIVGTRAQTAFDRGVNSVSWLLIRFMLVMVPVVLLINGFTKGDWL-E--------- 318 (903)
T ss_pred eeEEEEEEEeccccHhhHHH---HHhcCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCCHH-H---------
Confidence 77544333333333333221 11111111111 11346677778888887777666544322111 0
Q ss_pred CccccCCcChHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHH
Q 003189 385 THWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMK 429 (840)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~ai~ilvva~P~~Lplav~l~l~~~~~ 429 (840)
.+...+..++...-.+.|..+++++..+.....+
T Consensus 319 -----------~l~~aisl~V~~~Pe~Lp~~vt~~La~g~~~mak 352 (903)
T PRK15122 319 -----------ALLFALAVAVGLTPEMLPMIVSSNLAKGAIAMAR 352 (903)
T ss_pred -----------HHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHH
Confidence 2334566677777778888888888877655443
No 197
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=64.34 E-value=1.6e+02 Score=37.25 Aligned_cols=164 Identities=12% Similarity=0.067 Sum_probs=82.0
Q ss_pred CCeEEEEeccCCCCCcEEEecCCCcccccEEEEeecceEEecccc--cCCC--CccccC---CCCCeEEeccEEeeceEE
Q 003189 245 NGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSL--TGES--EPVNVN---ALNPFLLSGTKVQNGSCK 317 (840)
Q Consensus 245 dG~~~~I~~~dLvvGDIV~l~~Gd~VPaDgvll~g~~l~VDES~L--TGES--~pv~k~---~~~~~l~sGt~v~~G~~~ 317 (840)
-|....+..-|.+|-|.+.++.. ..=+|=-.+.|++.-|+=..- .++. .+..+. -.+..+.+|+-..-=...
T Consensus 137 ~GDiv~l~~Gd~IPaDg~ii~g~-~l~VDES~LTGES~pv~K~~~~~~~~~~~~~~~~~n~v~~GT~v~~G~~~~~V~~t 215 (884)
T TIGR01522 137 PGDLVCLSVGDRVPADLRIVEAV-DLSIDESNLTGETTPVSKVTAPIPAATNGDLAERSNIAFMGTLVRCGHGKGIVVGT 215 (884)
T ss_pred cCCEEEecCCCEEeeeEEEEEcC-ceEEEcccccCCCcceecccccccccccccccccCceEEeCCEEEeeeEEEEEEEe
Confidence 48889999999999999998743 344677777777644443321 1111 011111 123357777644332233
Q ss_pred EEEEEEcccchHHHHHHhhcCCCCCC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhcccCCCccccCCcChHH
Q 003189 318 MLVTTVGMRTQWGKLMATLSEGGDDE-TPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALE 396 (840)
Q Consensus 318 ~~V~~vG~~T~~g~i~~~~~~~~~~~-tplq~~l~~~a~~~~~~~l~~a~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 396 (840)
+.=|..|. +.++++........- ..+.+....+......++.++.++.+.. -..+. . .
T Consensus 216 G~~T~~gk---i~~~v~~~~~~kt~lq~~l~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~----------------~ 274 (884)
T TIGR01522 216 GSNTEFGA---VFKMMQAIEKPKTPLQKSMDLLGKQLSLVSFGVIGVICLVGWFQ-GKDWL-E----------------M 274 (884)
T ss_pred cCccHHHH---HHHHhccCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCCHH-H----------------H
Confidence 33344442 223333333322222 2233333444333222222222332222 11110 0 1
Q ss_pred HHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHH
Q 003189 397 ILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKK 430 (840)
Q Consensus 397 ~~~~~~~ai~ilvva~P~~Lplav~l~l~~~~~~ 430 (840)
+...+..++..+-.+.|.++|+++..+.....++
T Consensus 275 ~~~~v~llv~aiP~~Lp~~vt~~l~~~~~r~ak~ 308 (884)
T TIGR01522 275 FTISVSLAVAAIPEGLPIIVTVTLALGVLRMSKK 308 (884)
T ss_pred HHHHHHHHHHHccchHHHHHHHHHHHHHHHHhhc
Confidence 2344556677777888888999888887766544
No 198
>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only]
Probab=62.20 E-value=16 Score=36.65 Aligned_cols=52 Identities=21% Similarity=0.354 Sum_probs=42.6
Q ss_pred eeeeeecccCCCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHH---HHcCCcc
Q 003189 650 TCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIA---RECGILT 701 (840)
Q Consensus 650 ~~lg~~~~~D~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA---~~~Gi~~ 701 (840)
.+-|.+.++|..-|++.+|++.|+.++.+|..+|.-..+.-+.+. +.||+.-
T Consensus 13 DlSGtLh~e~~avpga~eAl~rLr~~~~kVkFvTNttk~Sk~~l~~rL~rlgf~v 67 (262)
T KOG3040|consen 13 DLSGTLHIEDAAVPGAVEALKRLRDQHVKVKFVTNTTKESKRNLHERLQRLGFDV 67 (262)
T ss_pred eccceEecccccCCCHHHHHHHHHhcCceEEEEecCcchhHHHHHHHHHHhCCCc
Confidence 456999999999999999999999999999999987766555555 4567653
No 199
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=61.96 E-value=32 Score=33.79 Aligned_cols=94 Identities=16% Similarity=0.239 Sum_probs=54.3
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEc-CCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCcccH
Q 003189 660 PMRPGVKESVAICRSAGITVRMVT-GDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 738 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~T-GD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K 738 (840)
.+-|+++++++.|++.|+++.+.| -+.+.-|+.+-+.++|...++.... +.+.+ -+...-|..|
T Consensus 45 ~lypdv~~iL~~L~~~gv~lavASRt~~P~~A~~~L~~l~i~~~~~~~~~-----------~~~~F----~~~eI~~gsK 109 (169)
T PF12689_consen 45 SLYPDVPEILQELKERGVKLAVASRTDEPDWARELLKLLEIDDADGDGVP-----------LIEYF----DYLEIYPGSK 109 (169)
T ss_dssp ---TTHHHHHHHHHHCT--EEEEE--S-HHHHHHHHHHTT-C---------------------CCE----CEEEESSS-H
T ss_pred EeCcCHHHHHHHHHHCCCEEEEEECCCChHHHHHHHHhcCCCcccccccc-----------chhhc----chhheecCch
Confidence 357999999999999999999999 5889999999999999721111100 00111 2234467788
Q ss_pred HHHHHHHHHhCC---CEEEEEcCCccCHHHhhh
Q 003189 739 HTLVKHLRTTLG---EVVAVTGDGTNDAPALHE 768 (840)
Q Consensus 739 ~~~V~~l~~~~g---~~v~~~GDG~ND~~al~~ 768 (840)
..-.+.+++..| +.++++=|-..-....+.
T Consensus 110 ~~Hf~~i~~~tgI~y~eMlFFDDe~~N~~~v~~ 142 (169)
T PF12689_consen 110 TTHFRRIHRKTGIPYEEMLFFDDESRNIEVVSK 142 (169)
T ss_dssp HHHHHHHHHHH---GGGEEEEES-HHHHHHHHT
T ss_pred HHHHHHHHHhcCCChhHEEEecCchhcceeeEe
Confidence 888888887644 346666665544444443
No 200
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=60.66 E-value=40 Score=35.00 Aligned_cols=49 Identities=18% Similarity=0.241 Sum_probs=35.7
Q ss_pred eeecccCCCCcchHHHHHHHHhCCCEEEEEc---CCCHHHHHHHHHH-cCCcc
Q 003189 653 GIVGIKDPMRPGVKESVAICRSAGITVRMVT---GDNINTAKAIARE-CGILT 701 (840)
Q Consensus 653 g~~~~~D~lR~~~~~aI~~l~~aGi~v~m~T---GD~~~ta~~iA~~-~Gi~~ 701 (840)
|++.-.+.+=|++.++|+.++++|+++.++| |.........-.+ .|+..
T Consensus 7 GvL~~~~~~~~~a~e~i~~l~~~g~~~~~~tN~~~~~~~~~~~~l~~~~g~~~ 59 (236)
T TIGR01460 7 GVLWLGHKPIPGAAEALNRLRAKGKPVVFLTNNSSRSEEDYAEKLSSLLGVDV 59 (236)
T ss_pred CccCcCCccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHhcCCCC
Confidence 4444456667899999999999999999998 6666555444444 67743
No 201
>PTZ00445 p36-lilke protein; Provisional
Probab=60.15 E-value=90 Score=31.81 Aligned_cols=137 Identities=16% Similarity=0.190 Sum_probs=77.8
Q ss_pred HHHHHHHHHHHHcccceeEEEEEEcCCCCCCCCCCCCCceeeee--eecccCC----------CCcchHHHHHHHHhCCC
Q 003189 610 NHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIG--IVGIKDP----------MRPGVKESVAICRSAGI 677 (840)
Q Consensus 610 ~~~~~~~~~~~~~glr~l~~A~~~~~~~~~~~~~~~~~~~~~lg--~~~~~D~----------lR~~~~~aI~~l~~aGi 677 (840)
+......+.+.+.|.|++++-+ |.|+++ .=|.-+| ++|+.+.-++.|+++||
T Consensus 29 ~~~~~~v~~L~~~GIk~Va~D~----------------DnTlI~~HsgG~~~~~~~~~~~~~~~tpefk~~~~~l~~~~I 92 (219)
T PTZ00445 29 ESADKFVDLLNECGIKVIASDF----------------DLTMITKHSGGYIDPDNDDIRVLTSVTPDFKILGKRLKNSNI 92 (219)
T ss_pred HHHHHHHHHHHHcCCeEEEecc----------------hhhhhhhhcccccCCCcchhhhhccCCHHHHHHHHHHHHCCC
Confidence 3455566778889999998742 333333 0012333 79999999999999999
Q ss_pred EEEEEcCCCHHHHHHHHHHcCCcc-CCCccccChhhhcCCHHHHhhhcCCceEEEe------------------cCcccH
Q 003189 678 TVRMVTGDNINTAKAIARECGILT-DNGIAIEGPEFREKSDEELSKLIPKIQVMAR------------------SSPMDK 738 (840)
Q Consensus 678 ~v~m~TGD~~~ta~~iA~~~Gi~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar------------------~~P~~K 738 (840)
+|.++|=-...+ |.. .....+.|.++-+..-+.=..-..-.+|+|- -.|+.|
T Consensus 93 ~v~VVTfSd~~~---------~~~~~~~~~Isg~~li~~~lk~s~~~~~i~~~~~yyp~~w~~p~~y~~~gl~KPdp~iK 163 (219)
T PTZ00445 93 KISVVTFSDKEL---------IPSENRPRYISGDRMVEAALKKSKCDFKIKKVYAYYPKFWQEPSDYRPLGLDAPMPLDK 163 (219)
T ss_pred eEEEEEccchhh---------ccccCCcceechHHHHHHHHHhcCccceeeeeeeeCCcccCChhhhhhhcccCCCccch
Confidence 999999665543 111 1223444544432111000000000112321 134454
Q ss_pred HHHHHHHHHhCC---CEEEEEcCCccCHHHhhhCCc
Q 003189 739 HTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADI 771 (840)
Q Consensus 739 ~~~V~~l~~~~g---~~v~~~GDG~ND~~al~~Adv 771 (840)
.--.+.+.+++| +.++++=|....+.+-++.++
T Consensus 164 ~yHle~ll~~~gl~peE~LFIDD~~~NVeaA~~lGi 199 (219)
T PTZ00445 164 SYHLKQVCSDFNVNPDEILFIDDDMNNCKNALKEGY 199 (219)
T ss_pred HHHHHHHHHHcCCCHHHeEeecCCHHHHHHHHHCCC
Confidence 444455555545 568889999888888877654
No 202
>PF00122 E1-E2_ATPase: E1-E2 ATPase p-type cation-transporting ATPase superfamily signature H+-transporting ATPase (proton pump) signature sodium/potassium-transporting ATPase signature; InterPro: IPR008250 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the actuator (A) domain, and some transmembrane helices found in P-type ATPases []. It contains the TGES-loop which is essential for the metal ion binding which results in tight association between the A and P (phosphorylation) domains []. It does not contain the phosphorylation site. It is thought that the large movement of the actuator domain, which is transmitted to the transmembrane helices, is essential to the long distance coupling between formation/decomposition of the acyl phosphate in the cytoplasmic P-domain and the changes in the ion-binding sites buried deep in the membranous region []. This domain has a modulatory effect on the phosphoenzyme processing steps through its nucleotide binding [],[]. P-type (or E1-E2-type) ATPases that form an aspartyl phosphate intermediate in the course of ATP hydrolysis, can be divided into 4 major groups []: (1) Ca2+-transporting ATPases; (2) Na+/K+- and gastric H+/K+-transporting ATPases; (3) plasma membrane H+-transporting ATPases (proton pumps) of plants, fungi and lower eukaryotes; and (4) all bacterial P-type ATPases, except the g2+-ATPase of Salmonella typhimurium, which is more similar to the eukaryotic sequences. However, great variety of sequence analysis methods results in diversity of classification. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0000166 nucleotide binding, 0046872 metal ion binding; PDB: 2XZB_A 1MHS_B 3TLM_A 3A3Y_A 2ZXE_A 3NAL_A 3NAM_A 3NAN_A 2YJ6_B 2IYE_A ....
Probab=59.18 E-value=92 Score=31.87 Aligned_cols=193 Identities=15% Similarity=0.144 Sum_probs=97.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhHhHhhhcCceEEEEECCeEEEEeccCCCCCcEEEecCCCcccccEEEEeecc-eEEeccc
Q 003189 210 ILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFS-VLINESS 288 (840)
Q Consensus 210 illv~~v~~~~~~~~~~~~~~l~~~~~~~~v~V~RdG~~~~I~~~dLvvGDIV~l~~Gd~VPaDgvll~g~~-l~VDES~ 288 (840)
++++++++.+.++.++++.++..+..+.... .+...+ +.-|....+...|.+|-|.+.+...+ +-+|=-.
T Consensus 2 i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-----~~~~~v----~r~~~~~~i~~~~L~~GDiI~l~~g~~vPaD~~l 72 (230)
T PF00122_consen 2 ILFLILLSNIIEIWQEYRSKKQLKKLNNLNP-----QKKVTV----IRDGRWQKIPSSELVPGDIIILKAGDIVPADGIL 72 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCTTSS-----SEEEEE----EETTEEEEEEGGGT-TTSEEEEETTEBESSEEEE
T ss_pred EEEEhHHHHHHHHHHHHHHHHHHHHHhccCC-----CccEEE----EeccccccchHhhccceeeeecccccccccCccc
Confidence 5566677777777777777666655544221 121222 23379999999999999999997543 2233333
Q ss_pred cc-CCCCcccc---CCCCCeE-E-----eccEEeeceEEEEEEEEcccchHHH---HHHhhcCCCCCCChHHHHHHHHHH
Q 003189 289 LT-GESEPVNV---NALNPFL-L-----SGTKVQNGSCKMLVTTVGMRTQWGK---LMATLSEGGDDETPLQVKLNGVAT 355 (840)
Q Consensus 289 LT-GES~pv~k---~~~~~~l-~-----sGt~v~~G~~~~~V~~vG~~T~~g~---i~~~~~~~~~~~tplq~~l~~~a~ 355 (840)
+. |...--+- .+..|.- . .|..+..|+...-=...|.-+..|. +.+........ .+....+++...
T Consensus 73 l~~g~~~vd~s~ltGes~pv~k~~~~~~~~~~i~~Gs~v~~g~~~~~Vi~tG~~t~~~~~~~~~~~~-~~~~~~~~~~~~ 151 (230)
T PF00122_consen 73 LESGSAYVDESALTGESEPVKKTPLPLNPGNIIFAGSIVVSGWGIGVVIATGSDTKLGRILQLVSKS-ESKKSPLERKLN 151 (230)
T ss_dssp EESSEEEEECHHHHSBSSEEEESSSCCCTTTEE-TTEEEEEEEEEEEEEE-GGGSHHHHHHHHHHTS-CSS-THHHHHHH
T ss_pred eeccccccccccccccccccccccccccccchhhccccccccccccccceeeecccccccccccccc-cccchhhhhhhH
Confidence 33 21111000 0123322 2 6788888875543333344444343 22333322222 333355666666
Q ss_pred HHHHHHHHHHHHHHHHHHHhHhhhcccCCCccccCCcChHHHH----HHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHH
Q 003189 356 IIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEIL----EFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKM 431 (840)
Q Consensus 356 ~~~~~~l~~a~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~ai~ilvva~P~~Lplav~l~l~~~~~~l 431 (840)
.+..+.+.+.++..++.+ +. .+. ..+...+...+...=...|.++++++..+....
T Consensus 152 ~~~~~~~~~~~~~~~~~~---~~-----------------~~~~~~~~~~~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~ 211 (230)
T PF00122_consen 152 KIAKILIIIILAIAILVF---II-----------------WFFNDSGISFFKSFLFAISLLIVLIPCALPLALPLSLAIA 211 (230)
T ss_dssp HHHHHHHHHHHHHHHHHH---HH-----------------CHTGSTTCHCCHHHHHHHHHHHHHS-TTHHHHHHHHHHHH
T ss_pred HHHHHHHhcccccchhhh---cc-----------------ceecccccccccccccccceeeeecccceeehHHHHHHHH
Confidence 665555444333322211 00 011 122445556666666778888888887777655
Q ss_pred h
Q 003189 432 M 432 (840)
Q Consensus 432 ~ 432 (840)
+
T Consensus 212 ~ 212 (230)
T PF00122_consen 212 A 212 (230)
T ss_dssp H
T ss_pred H
Confidence 4
No 203
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=58.91 E-value=34 Score=34.88 Aligned_cols=120 Identities=16% Similarity=0.196 Sum_probs=72.0
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCcccHH
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~ 739 (840)
++-|++.++++.+++. +++.++|--....+....+++||...-+.++.-. -.....|.. .
T Consensus 99 ~~~~~~~~~L~~l~~~-~~l~ilTNg~~~~~~~~l~~~gl~~~Fd~v~~s~------------------~~g~~KP~~-~ 158 (229)
T COG1011 99 PDYPEALEALKELGKK-YKLGILTNGARPHQERKLRQLGLLDYFDAVFISE------------------DVGVAKPDP-E 158 (229)
T ss_pred ccChhHHHHHHHHHhh-ccEEEEeCCChHHHHHHHHHcCChhhhheEEEec------------------ccccCCCCc-H
Confidence 5678899999999999 9999999988888888999999765322222111 112234433 3
Q ss_pred HHHHHHHHhCC---CEEEEEcCC-ccCHHHhhhCCcc-EEecCCCc---HHHHhhcCEEeccCCchHHHHHH
Q 003189 740 TLVKHLRTTLG---EVVAVTGDG-TNDAPALHEADIG-LAMGIAGT---EVAKESADVIILDDNFSTIVTVA 803 (840)
Q Consensus 740 ~~V~~l~~~~g---~~v~~~GDG-~ND~~al~~Advg-iamg~~g~---~~ak~~aDivlldd~f~~i~~~i 803 (840)
-.-..+++. | +.+.||||. .||+..-++++.- +-+...+. +.. ...|..+.+ +..+..++
T Consensus 159 ~f~~~~~~~-g~~p~~~l~VgD~~~~di~gA~~~G~~~vwi~~~~~~~~~~~-~~~~~~i~~--l~~l~~~~ 226 (229)
T COG1011 159 IFEYALEKL-GVPPEEALFVGDSLENDILGARALGMKTVWINRGGKPLPDAL-EAPDYEISS--LAELLDLL 226 (229)
T ss_pred HHHHHHHHc-CCCcceEEEECCChhhhhHHHHhcCcEEEEECCCCCCCCCCc-cCCceEEcC--HHHHHHHH
Confidence 333334433 5 579999996 5674666666653 33331111 112 445655533 55555544
No 204
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=58.67 E-value=45 Score=35.14 Aligned_cols=120 Identities=13% Similarity=0.169 Sum_probs=63.5
Q ss_pred CcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcC-CceEEEecCcccHHH
Q 003189 662 RPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIP-KIQVMARSSPMDKHT 740 (840)
Q Consensus 662 R~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~v~ar~~P~~K~~ 740 (840)
-++..++++.|++.|+...+.|+.............|+. .-+..+ ..... +..+++ .|. ..
T Consensus 122 y~~l~~a~~~L~~~~~~~~iatn~~~~~~~~~~~~~g~g---------~~~~~i-----~~~~~~~~~~~g--KP~--p~ 183 (257)
T TIGR01458 122 YQILNQAFRLLLDGAKPLLIAIGKGRYYKRKDGLALDVG---------PFVTAL-----EYATDTKATVVG--KPS--KT 183 (257)
T ss_pred HHHHHHHHHHHHcCCCCEEEEeCCCCCCcCCCCCCCCch---------HHHHHH-----HHHhCCCceeec--CCC--HH
Confidence 367889999999999999999886643322111111110 000000 00000 111222 332 12
Q ss_pred HHHHHHHhCC---CEEEEEcCCc-cCHHHhhhCCcc-EEecCCCc---H-H--HHhhcCEEeccCCchHHHHH
Q 003189 741 LVKHLRTTLG---EVVAVTGDGT-NDAPALHEADIG-LAMGIAGT---E-V--AKESADVIILDDNFSTIVTV 802 (840)
Q Consensus 741 ~V~~l~~~~g---~~v~~~GDG~-ND~~al~~Advg-iamg~~g~---~-~--ak~~aDivlldd~f~~i~~~ 802 (840)
+.+...+++| +.+.|+||.. +|+.+-+.+++- +.+. .|. + . ....+|+++ +++..+...
T Consensus 184 ~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~~G~~~i~v~-~G~~~~~~~~~~~~~pd~~~--~sl~el~~~ 253 (257)
T TIGR01458 184 FFLEALRATGCEPEEAVMIGDDCRDDVGGAQDCGMRGIQVR-TGKYRPSDEEKINVPPDLTC--DSLPHAVDL 253 (257)
T ss_pred HHHHHHHHhCCChhhEEEECCCcHHHHHHHHHcCCeEEEEC-CCCCChHHhcccCCCCCEEE--CCHHHHHHH
Confidence 2222222223 6799999996 899999999874 4443 332 1 1 223478877 447766654
No 205
>PF06506 PrpR_N: Propionate catabolism activator; InterPro: IPR010524 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents a domain found at the N terminus of several sigma54- dependent transcriptional activators including PrpR, which activates catabolism of propionate. In Salmonella enterica subsp. enterica serovar Typhimurium, PrpR acts as a sensor of 2-methylcitrate (2-MC), an intermediate of the 2-methylcitric acid cycle used by this bacterium to convert propionate to pyruvate []. ; GO: 0000156 two-component response regulator activity, 0003677 DNA binding, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay); PDB: 2Q5C_A 2PJU_A.
Probab=48.29 E-value=53 Score=32.40 Aligned_cols=107 Identities=13% Similarity=0.172 Sum_probs=68.5
Q ss_pred chHHHHHHHHhCCCEEEEEcCCCHHH-HHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCcccHHHHH
Q 003189 664 GVKESVAICRSAGITVRMVTGDNINT-AKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLV 742 (840)
Q Consensus 664 ~~~~aI~~l~~aGi~v~m~TGD~~~t-a~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~~V 742 (840)
|..+++.++++.|-++.+++=.+... ...+..-+|+.- ..+.=.+|++=...+
T Consensus 65 Dil~al~~a~~~~~~Iavv~~~~~~~~~~~~~~ll~~~i--------------------------~~~~~~~~~e~~~~i 118 (176)
T PF06506_consen 65 DILRALAKAKKYGPKIAVVGYPNIIPGLESIEELLGVDI--------------------------KIYPYDSEEEIEAAI 118 (176)
T ss_dssp HHHHHHHHCCCCTSEEEEEEESS-SCCHHHHHHHHT-EE--------------------------EEEEESSHHHHHHHH
T ss_pred HHHHHHHHHHhcCCcEEEEecccccHHHHHHHHHhCCce--------------------------EEEEECCHHHHHHHH
Confidence 44566666666676777776666553 566666666632 355556788888889
Q ss_pred HHHHHhCCCEEEEEcCCccCHHHhhhCCccEEecCCCcHHHHhhcCEEeccCCchHHHHHHHHHHHHHHHHHH
Q 003189 743 KHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQK 815 (840)
Q Consensus 743 ~~l~~~~g~~v~~~GDG~ND~~al~~Advgiamg~~g~~~ak~~aDivlldd~f~~i~~~i~~gR~~~~~i~k 815 (840)
+.++.. | .-+++|++.- ....++ ..-..++...+..+|..++.+++++++..++
T Consensus 119 ~~~~~~-G-~~viVGg~~~-~~~A~~----------------~gl~~v~i~sg~esi~~Al~eA~~i~~~~~~ 172 (176)
T PF06506_consen 119 KQAKAE-G-VDVIVGGGVV-CRLARK----------------LGLPGVLIESGEESIRRALEEALRIARARRR 172 (176)
T ss_dssp HHHHHT-T---EEEESHHH-HHHHHH----------------TTSEEEESS--HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHc-C-CcEEECCHHH-HHHHHH----------------cCCcEEEEEecHHHHHHHHHHHHHHHHHHHH
Confidence 999887 7 4556677632 122222 2234567777899999999999999988775
No 206
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=47.47 E-value=21 Score=37.91 Aligned_cols=45 Identities=20% Similarity=0.322 Sum_probs=38.2
Q ss_pred eeeecccCCCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHH
Q 003189 652 IGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARE 696 (840)
Q Consensus 652 lg~~~~~D~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~ 696 (840)
=|++.--..+=|++.++|+.|+++|++++++|--...+...++++
T Consensus 16 DGvl~~G~~~ipga~e~l~~L~~~g~~~iflTNn~~~s~~~~~~~ 60 (269)
T COG0647 16 DGVLYRGNEAIPGAAEALKRLKAAGKPVIFLTNNSTRSREVVAAR 60 (269)
T ss_pred cCceEeCCccCchHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHH
Confidence 477778889999999999999999999999999887766644443
No 207
>PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B ....
Probab=46.05 E-value=35 Score=28.20 Aligned_cols=42 Identities=21% Similarity=0.337 Sum_probs=29.8
Q ss_pred CEEEEEcCC-ccCHHHhhhCCcc-EEe--cCCCcHHHH---hhcCEEec
Q 003189 751 EVVAVTGDG-TNDAPALHEADIG-LAM--GIAGTEVAK---ESADVIIL 792 (840)
Q Consensus 751 ~~v~~~GDG-~ND~~al~~Advg-iam--g~~g~~~ak---~~aDivll 792 (840)
..+.|+||. ..|..+-+++++- |.+ |....+... ..+|+|+-
T Consensus 22 ~~~~~VGD~~~~Di~~a~~~G~~~ilV~tG~~~~~~~~~~~~~pd~vv~ 70 (75)
T PF13242_consen 22 SRCVMVGDSLETDIEAAKAAGIDTILVLTGVYSPEDLEKAEHKPDYVVD 70 (75)
T ss_dssp GGEEEEESSTTTHHHHHHHTTSEEEEESSSSSCCCGHHHSSSTTSEEES
T ss_pred HHEEEEcCCcHhHHHHHHHcCCcEEEECCCCCCHHHHhccCCCCCEEEC
Confidence 679999999 9999999999974 333 322223322 57899873
No 208
>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=44.98 E-value=1.8e+02 Score=31.18 Aligned_cols=166 Identities=14% Similarity=0.177 Sum_probs=80.3
Q ss_pred CCHHHHHHHHHHHHHHHHcccceeEEEEEEcCCCCCCCCCCCCCceeeeeeecccCCCCcc--hHHHHHHHHhCCCEEEE
Q 003189 604 LNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRPG--VKESVAICRSAGITVRM 681 (840)
Q Consensus 604 l~~~~~~~~~~~~~~~~~~glr~l~~A~~~~~~~~~~~~~~~~~~~~~lg~~~~~D~lR~~--~~~aI~~l~~aGi~v~m 681 (840)
+.++.++++.+.++.+..+|.+. .+| ++-.-|.+-.. ++..++.|++.|+.+.+
T Consensus 11 va~~i~~~lk~~i~~l~~~g~~p-~La-----------------------ii~vg~d~as~~Yv~~k~k~~~~~Gi~~~~ 66 (285)
T PRK14189 11 LSKQLRAEAAQRAAALTARGHQP-GLA-----------------------VILVGDNPASQVYVRNKVKACEDNGFHSLK 66 (285)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCC-eEE-----------------------EEEeCCCchHHHHHHHHHHHHHHcCCEEEE
Confidence 44566777888888887777543 333 22333333222 36778899999998776
Q ss_pred EcCCC---HHHHHHHHHHcCCccC-CCccccCh------------------hhhcCCHHHHhhhcCCceEEEecCcccHH
Q 003189 682 VTGDN---INTAKAIARECGILTD-NGIAIEGP------------------EFREKSDEELSKLIPKIQVMARSSPMDKH 739 (840)
Q Consensus 682 ~TGD~---~~ta~~iA~~~Gi~~~-~~~~~~g~------------------~~~~~~~~~~~~~~~~~~v~ar~~P~~K~ 739 (840)
+-=+. .....+.=++++=+.. +++.+.-+ +.+-+++..+..++..-..|.-|+|.-=.
T Consensus 67 ~~l~~~~~~~~l~~~I~~lN~d~~V~GIlvq~Plp~~i~~~~i~~~I~p~KDVDGl~~~n~g~l~~~~~~~~PcTp~aii 146 (285)
T PRK14189 67 DRYPADLSEAELLARIDELNRDPKIHGILVQLPLPKHIDSHKVIEAIAPEKDVDGFHVANAGALMTGQPLFRPCTPYGVM 146 (285)
T ss_pred EECCCCCCHHHHHHHHHHHcCCCCCCeEEEeCCCCCCCCHHHHHhhcCcccCcccCChhhhhHhhCCCCCCcCCCHHHHH
Confidence 65332 3333344444433221 12222111 11122222222222221234445554444
Q ss_pred HHHHHHHHh-CCCEEEEEcCCcc-C---HHHhhhCCccEEecCCCc-HH--HHhhcCEEecc
Q 003189 740 TLVKHLRTT-LGEVVAVTGDGTN-D---APALHEADIGLAMGIAGT-EV--AKESADVIILD 793 (840)
Q Consensus 740 ~~V~~l~~~-~g~~v~~~GDG~N-D---~~al~~Advgiamg~~g~-~~--ak~~aDivlld 793 (840)
++++...-. .|..|.++|-|.. - +.+|...+.-+.+-.+.+ +. .-..|||++.-
T Consensus 147 ~lL~~~~i~l~Gk~vvViGrs~iVGkPla~lL~~~~atVt~~hs~t~~l~~~~~~ADIVV~a 208 (285)
T PRK14189 147 KMLESIGIPLRGAHAVVIGRSNIVGKPMAMLLLQAGATVTICHSKTRDLAAHTRQADIVVAA 208 (285)
T ss_pred HHHHHcCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEecCCCCCHHHHhhhCCEEEEc
Confidence 444433211 2788999998865 2 334444444333222222 22 33568888753
No 209
>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=44.97 E-value=1.9e+02 Score=31.00 Aligned_cols=165 Identities=15% Similarity=0.208 Sum_probs=79.5
Q ss_pred CCHHHHHHHHHHHHHHHHc-ccceeEEEEEEcCCCCCCCCCCCCCceeeeeeecccCCCCcc--hHHHHHHHHhCCCEEE
Q 003189 604 LNEAAVNHLNETIEKFASE-ALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRPG--VKESVAICRSAGITVR 680 (840)
Q Consensus 604 l~~~~~~~~~~~~~~~~~~-glr~l~~A~~~~~~~~~~~~~~~~~~~~~lg~~~~~D~lR~~--~~~aI~~l~~aGi~v~ 680 (840)
+.++.++++.+.++.+..+ |.+. .+ +++-.-|.+-.. ++..++.|++.|+.+.
T Consensus 10 ia~~i~~~lk~~v~~l~~~~g~~P-~L-----------------------aii~vg~d~as~~Yv~~k~k~~~~~Gi~~~ 65 (284)
T PRK14179 10 LAQKMQAELAEKVAKLKEEKGIVP-GL-----------------------VVILVGDNPASQVYVRNKERSALAAGFKSE 65 (284)
T ss_pred HHHHHHHHHHHHHHHHHhccCCCc-eE-----------------------EEEEeCCChhHHHHHHHHHHHHHHcCCEEE
Confidence 4456667777777777655 4433 22 333333333322 3556889999999876
Q ss_pred EEcCCC---HHHHHHHHHHcCCccC-CCcccc------------------ChhhhcCCHHHHhhhcCCceEEEecCcccH
Q 003189 681 MVTGDN---INTAKAIARECGILTD-NGIAIE------------------GPEFREKSDEELSKLIPKIQVMARSSPMDK 738 (840)
Q Consensus 681 m~TGD~---~~ta~~iA~~~Gi~~~-~~~~~~------------------g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K 738 (840)
...=+. .....+.-++++=+.. +++.+. .++.+-+++..+..++..-..|.-|||.-=
T Consensus 66 ~~~l~~~~~~~~l~~~I~~lN~d~~V~GIivqlPlp~~i~~~~i~~~I~p~KDVDGl~~~N~g~l~~~~~~~~PcTp~av 145 (284)
T PRK14179 66 VVRLPETISQEELLDLIERYNQDPTWHGILVQLPLPKHINEEKILLAIDPKKDVDGFHPMNTGHLWSGRPVMIPCTPAGI 145 (284)
T ss_pred EEECCCCCCHHHHHHHHHHHhCCCCCCEEEEcCCCCCCCCHHHHHhccCccccccccCHhhHHHHhCCCCCCcCCCHHHH
Confidence 655442 2333334444432211 122221 112222233333222222223445566554
Q ss_pred HHHHHHHHHh-CCCEEEEEcC-CccCHH---HhhhCCccEEecCCCcH-H--HHhhcCEEec
Q 003189 739 HTLVKHLRTT-LGEVVAVTGD-GTNDAP---ALHEADIGLAMGIAGTE-V--AKESADVIIL 792 (840)
Q Consensus 739 ~~~V~~l~~~-~g~~v~~~GD-G~ND~~---al~~Advgiamg~~g~~-~--ak~~aDivll 792 (840)
.++++...-. .|..++++|- |+--.| +|..++.-+..=.+-++ . .-..||+|+.
T Consensus 146 i~lL~~~~i~l~Gk~v~vIG~S~ivG~Pla~lL~~~gatVtv~~s~t~~l~~~~~~ADIVI~ 207 (284)
T PRK14179 146 MEMFREYNVELEGKHAVVIGRSNIVGKPMAQLLLDKNATVTLTHSRTRNLAEVARKADILVV 207 (284)
T ss_pred HHHHHHhCCCCCCCEEEEECCCCcCcHHHHHHHHHCCCEEEEECCCCCCHHHHHhhCCEEEE
Confidence 4444433211 2789999999 555555 34444444333112222 2 2356888874
No 210
>PF03120 DNA_ligase_OB: NAD-dependent DNA ligase OB-fold domain; InterPro: IPR004150 DNA ligases catalyse the crucial step of joining the breaks in duplex DNA during DNA replication, repair and recombination, utilizing either ATP or NAD(+) as a cofactor []. This family is a small domain found after the adenylation domain DNA_ligase_N in NAD+-dependent ligases (IPR001679 from INTERPRO). OB-fold domains generally are involved in nucleic acid binding.; GO: 0003911 DNA ligase (NAD+) activity, 0006260 DNA replication, 0006281 DNA repair; PDB: 2OWO_A 1TAE_A 3UQ8_A 1DGS_A 1V9P_B 3SGI_A.
Probab=42.67 E-value=13 Score=31.73 Aligned_cols=20 Identities=35% Similarity=0.521 Sum_probs=15.4
Q ss_pred ccCCCCCcEEEe-cCCCcccc
Q 003189 253 IYDLLPGDIVHL-CMGDQVPA 272 (840)
Q Consensus 253 ~~dLvvGDIV~l-~~Gd~VPa 272 (840)
-.+|.+||.|.+ ++||.||-
T Consensus 47 ~~~i~~Gd~V~V~raGdVIP~ 67 (82)
T PF03120_consen 47 ELDIRIGDTVLVTRAGDVIPK 67 (82)
T ss_dssp HTT-BBT-EEEEEEETTTEEE
T ss_pred HcCCCCCCEEEEEECCCccce
Confidence 468999999988 69999995
No 211
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=41.96 E-value=2.3e+02 Score=30.67 Aligned_cols=165 Identities=16% Similarity=0.199 Sum_probs=78.5
Q ss_pred CCHHHHHHHHHHHHHHHHcccceeEEEEEEcCCCCCCCCCCCCCceeeeeeecccCCCCc--chHHHHHHHHhCCCEEEE
Q 003189 604 LNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRP--GVKESVAICRSAGITVRM 681 (840)
Q Consensus 604 l~~~~~~~~~~~~~~~~~~glr~l~~A~~~~~~~~~~~~~~~~~~~~~lg~~~~~D~lR~--~~~~aI~~l~~aGi~v~m 681 (840)
+.++.++++.+.++.+..+|.+. .+| ++-.-|.+-. -++.-++.|++.||...+
T Consensus 12 iA~~i~~~lk~~i~~l~~~g~~P-~La-----------------------iI~vg~d~as~~Yv~~k~k~a~~~Gi~~~~ 67 (301)
T PRK14194 12 AAARVLAQVREDVRTLKAAGIEP-ALA-----------------------VILVGNDPASQVYVRNKILRAEEAGIRSLE 67 (301)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCC-eEE-----------------------EEEeCCChhHHHHHHHHHHHHHHcCCEEEE
Confidence 34566677888888887666543 232 2222333222 236678889999998655
Q ss_pred EcC--C-CHHHHHHHHHHcCCccC-CCccccC------------------hhhhcCCHHHHhhhcCCceEEEecCcccHH
Q 003189 682 VTG--D-NINTAKAIARECGILTD-NGIAIEG------------------PEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (840)
Q Consensus 682 ~TG--D-~~~ta~~iA~~~Gi~~~-~~~~~~g------------------~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~ 739 (840)
.-= + ..+...+.-++++-+.. +++.+.- ++.+-+++..+..+...-..|.-|||.-=.
T Consensus 68 ~~l~~~~t~~~l~~~I~~lN~D~~V~GIlvqlPLP~~i~~~~i~~~I~p~KDVDGl~~~N~g~l~~~~~~~~PcTp~aii 147 (301)
T PRK14194 68 HRLPADTSQARLLALIAELNADPSVNGILLQLPLPAHIDEARVLQAINPLKDVDGFHSENVGGLSQGRDVLTPCTPSGCL 147 (301)
T ss_pred EECCCCCCHHHHHHHHHHHcCCCCCCeEEEeCCCCCCCCHHHHHhccCchhccCccChhhhhHHhcCCCCCCCCcHHHHH
Confidence 432 2 22333333344432221 1222211 111222222222222222234445565544
Q ss_pred HHHHHHHHh-CCCEEEEEcCC-ccCHH---HhhhCCccEEecCCCc---HHHHhhcCEEec
Q 003189 740 TLVKHLRTT-LGEVVAVTGDG-TNDAP---ALHEADIGLAMGIAGT---EVAKESADVIIL 792 (840)
Q Consensus 740 ~~V~~l~~~-~g~~v~~~GDG-~ND~~---al~~Advgiamg~~g~---~~ak~~aDivll 792 (840)
++++...-. .|..|+++|-| .--.| +|..++..+.+=.+-+ ..+-..||+|+.
T Consensus 148 ~lL~~~~i~l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~~l~e~~~~ADIVIs 208 (301)
T PRK14194 148 RLLEDTCGDLTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRSTDAKALCRQADIVVA 208 (301)
T ss_pred HHHHHhCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCCCHHHHHhcCCEEEE
Confidence 444443211 27899999997 44444 3445555444321211 122345788764
No 212
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=41.61 E-value=7.4e+02 Score=30.24 Aligned_cols=32 Identities=13% Similarity=0.107 Sum_probs=18.2
Q ss_pred EEEecCCCcccccEEEEe-ecceEEecccccCC
Q 003189 261 IVHLCMGDQVPADGLFVS-GFSVLINESSLTGE 292 (840)
Q Consensus 261 IV~l~~Gd~VPaDgvll~-g~~l~VDES~LTGE 292 (840)
...+...+.+|-|-++++ |+.+-+|=-.+.|+
T Consensus 115 ~~~V~~~eL~~GDiV~v~~Gd~IPaDG~vieG~ 147 (679)
T PRK01122 115 AEEVPATELRKGDIVLVEAGEIIPADGEVIEGV 147 (679)
T ss_pred EEEEEHHHcCCCCEEEEcCCCEEEEEEEEEEcc
Confidence 566667777777777665 33344444444453
No 213
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=41.32 E-value=5e+02 Score=32.98 Aligned_cols=203 Identities=20% Similarity=0.152 Sum_probs=110.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhHhHhhh-----cCceEEE----EECCeEEEEeccCCCCCcEEEecCCCcccccEEEE
Q 003189 207 VMSILLVVFVTATSDYKQSLQFKDLDREK-----KKITVQV----ARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFV 277 (840)
Q Consensus 207 ~~~illv~~v~~~~~~~~~~~~~~l~~~~-----~~~~v~V----~RdG~~~~I~~~dLvvGDIV~l~~Gd~VPaDgvll 277 (840)
++...++.++.-......-.+++++.... +....++ +.-|....+...|.+|-|...|+.-+ .=+|=-.+
T Consensus 113 i~~n~~~g~~qe~~a~~~l~~lk~~~~~~~~V~R~g~~~~i~a~eLVpGDiV~l~~gd~vPAD~rLl~~~~-l~VdEs~L 191 (917)
T COG0474 113 VVINALLGFVQEYRAEKALEALKKMSSPKAKVLRDGKFVEIPASELVPGDIVLLEAGDVVPADLRLLESSD-LEVDESAL 191 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccCceEEEeCCcEEEecHHHCCCCcEEEECCCCccccceEEEEecC-ceEEcccc
Confidence 33444445777777777666666655421 2222222 23588999999999999999999888 56666677
Q ss_pred eecceEEecccccC--CC-----CccccCCCCCeEEeccEEeeceEEEEEEEEcccchHHHHHHhh-cCCCCCCChHHHH
Q 003189 278 SGFSVLINESSLTG--ES-----EPVNVNALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATL-SEGGDDETPLQVK 349 (840)
Q Consensus 278 ~g~~l~VDES~LTG--ES-----~pv~k~~~~~~l~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~-~~~~~~~tplq~~ 349 (840)
.|++.-|+-....- |. +....--.+..+.+|+-..--..++.-|..|..+. .+... .....-...+.+.
T Consensus 192 TGES~pv~K~~~~~~~~~~~~~~d~~n~l~sGt~V~~G~~~giVvaTG~~T~~G~ia~---~~~~~~~~~t~l~~~l~~~ 268 (917)
T COG0474 192 TGESLPVEKQALPLTKSDAPLGLDRDNMLFSGTTVVSGRAKGIVVATGFETEFGKIAR---LLPTKKEVKTPLQRKLNKL 268 (917)
T ss_pred cCCCcchhccccccccccccccCCccceEEeCCEEEcceEEEEEEEEcCccHHHHHHH---hhccccccCCcHHHHHHHH
Confidence 77764443332211 11 11121122345777775544445555666666553 22222 1222222333333
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhHhhhcccCCCccccCCcChHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHH
Q 003189 350 LNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMK 429 (840)
Q Consensus 350 l~~~a~~~~~~~l~~a~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ai~ilvva~P~~Lplav~l~l~~~~~ 429 (840)
...+.......+.++.++.+..--..+.. .+...+..+++++-.+.|.-+-++..++...-.+
T Consensus 269 ~~~l~~~~l~~~~~~~~~~~~~~~~~~~~-----------------~~~~~v~l~va~IPegLp~~vti~la~g~~~mak 331 (917)
T COG0474 269 GKFLLVLALVLGALVFVVGLFRGGNGLLE-----------------SFLTALALAVAAVPEGLPAVVTIALALGAQRMAK 331 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCccHHH-----------------HHHHHHHHHHhccccchHHHHHHHHHHHHHHHHh
Confidence 34444433333333333333220110000 3456677788888888888888888887666444
Q ss_pred H
Q 003189 430 K 430 (840)
Q Consensus 430 ~ 430 (840)
+
T Consensus 332 ~ 332 (917)
T COG0474 332 D 332 (917)
T ss_pred c
Confidence 4
No 214
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=40.72 E-value=82 Score=34.42 Aligned_cols=49 Identities=14% Similarity=0.135 Sum_probs=39.6
Q ss_pred eeecccCCCCcchHHHHHHHHhC----CCEEEEEcCCC---HH-HHHHHHHHcCCcc
Q 003189 653 GIVGIKDPMRPGVKESVAICRSA----GITVRMVTGDN---IN-TAKAIARECGILT 701 (840)
Q Consensus 653 g~~~~~D~lR~~~~~aI~~l~~a----Gi~v~m~TGD~---~~-ta~~iA~~~Gi~~ 701 (840)
|++.-.+++-|++.++++.|+.. |+++..+|-.. .. .+..+.+++|+..
T Consensus 9 GvL~~g~~~i~ga~eal~~L~~~~~~~g~~~~flTNn~g~s~~~~~~~l~~~lG~~~ 65 (321)
T TIGR01456 9 GVLFRGKKPIAGASDALRRLNRNQGQLKIPYIFLTNGGGFSERARAEEISSLLGVDV 65 (321)
T ss_pred CceECCccccHHHHHHHHHHhccccccCCCEEEEecCCCCCHHHHHHHHHHHcCCCC
Confidence 66777788999999999999998 99999999654 33 3566678888853
No 215
>PF13380 CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5A_A 2D59_A 2E6U_X 1IUL_A 1IUK_A 1Y81_A 2DUW_A.
Probab=37.63 E-value=38 Score=30.90 Aligned_cols=39 Identities=28% Similarity=0.316 Sum_probs=30.2
Q ss_pred CcchHHHHHHHHhCCCE-EEEEcCCCHHHHHHHHHHcCCc
Q 003189 662 RPGVKESVAICRSAGIT-VRMVTGDNINTAKAIARECGIL 700 (840)
Q Consensus 662 R~~~~~aI~~l~~aGi~-v~m~TGD~~~ta~~iA~~~Gi~ 700 (840)
.+.+.+.+++|.+.|++ +|+.+|.....+...|++.|+.
T Consensus 65 ~~~~~~~v~~~~~~g~~~v~~~~g~~~~~~~~~a~~~gi~ 104 (116)
T PF13380_consen 65 PDKVPEIVDEAAALGVKAVWLQPGAESEELIEAAREAGIR 104 (116)
T ss_dssp HHHHHHHHHHHHHHT-SEEEE-TTS--HHHHHHHHHTT-E
T ss_pred HHHHHHHHHHHHHcCCCEEEEEcchHHHHHHHHHHHcCCE
Confidence 44678999999999995 9999999999999999999985
No 216
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=37.60 E-value=53 Score=31.75 Aligned_cols=41 Identities=20% Similarity=0.102 Sum_probs=37.2
Q ss_pred CCCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCc
Q 003189 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGIL 700 (840)
Q Consensus 659 D~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~ 700 (840)
=.+||++.+.+++|++. +++.++|.-....|..+.+.++..
T Consensus 57 v~~rPgv~efL~~l~~~-yel~I~T~~~~~yA~~vl~~ldp~ 97 (156)
T TIGR02250 57 TKLRPFLHEFLKEASKL-YEMHVYTMGTRAYAQAIAKLIDPD 97 (156)
T ss_pred EEECCCHHHHHHHHHhh-cEEEEEeCCcHHHHHHHHHHhCcC
Confidence 34799999999999955 999999999999999999999875
No 217
>PRK14170 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=37.51 E-value=88 Score=33.47 Aligned_cols=45 Identities=20% Similarity=0.304 Sum_probs=32.2
Q ss_pred ccCCCCcchHHHHHHHHhCCCE---EEEEcCCCHHHH------HHHHHHcCCcc
Q 003189 657 IKDPMRPGVKESVAICRSAGIT---VRMVTGDNINTA------KAIARECGILT 701 (840)
Q Consensus 657 ~~D~lR~~~~~aI~~l~~aGi~---v~m~TGD~~~ta------~~iA~~~Gi~~ 701 (840)
+...++.+.++-++.+++.|++ +.+..||++... ...|+++||..
T Consensus 10 iA~~i~~~ik~~i~~l~~~g~~P~Laii~vg~d~as~~Yv~~k~k~a~~~Gi~~ 63 (284)
T PRK14170 10 LAKEIQEKVTREVAELVKEGKKPGLAVVLVGDNQASRTYVRNKQKRTEEAGMKS 63 (284)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEE
Confidence 3456778888888998888875 566778886544 44678888864
No 218
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.
Probab=36.40 E-value=2.4e+02 Score=32.89 Aligned_cols=172 Identities=17% Similarity=0.103 Sum_probs=92.7
Q ss_pred ECCeEEEEeccCCCCCcEEEecCCCcccccEEEEeecceEEecccccCCCCccccCCCCCeEEeccEEeeceEEEEEEEE
Q 003189 244 RNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNALNPFLLSGTKVQNGSCKMLVTTV 323 (840)
Q Consensus 244 RdG~~~~I~~~dLvvGDIV~l~~Gd~VPaDgvll~g~~l~VDES~LTGES~pv~k~~~~~~l~sGt~v~~G~~~~~V~~v 323 (840)
+-|....+...|.+|-|.+.++- ..=+|--.+.|++.-+.-.. |+. -..+.+++.|+....-...+.-+..
T Consensus 53 ~~GDiv~v~~G~~iP~Dg~vl~g--~~~vdes~LTGEs~pv~k~~--g~~-----v~~gs~~~~G~~~~~v~~~~~~s~~ 123 (499)
T TIGR01494 53 VPGDIVLVKSGEIVPADGVLLSG--SCFVDESNLTGESVPVLKTA--GDA-----VFAGTYVFNGTLIVVVSATGPNTFG 123 (499)
T ss_pred CCCCEEEECCCCEeeeeEEEEEc--cEEEEcccccCCCCCeeecc--CCc-----cccCcEEeccEEEEEEEEeccccHH
Confidence 45889999999999999999866 55667777778774444322 332 1234568888876542222211111
Q ss_pred cccchHHHHHHhhcCCCCC-CChHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHh--HhhhcccCCCccccCCcChHHHHH
Q 003189 324 GMRTQWGKLMATLSEGGDD-ETPLQVKL-NGVATIIGKIGLFFAVVTFAVMVQG--LFTRKLQEGTHWTWSGDDALEILE 399 (840)
Q Consensus 324 G~~T~~g~i~~~~~~~~~~-~tplq~~l-~~~a~~~~~~~l~~a~~~~~v~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 399 (840)
..++.++..-.+.... .....+.. ..+......+++++.++.+..+... +.. .+..
T Consensus 124 ---~~i~~~v~~~~~~k~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~~~~~~~~~-----------------~~~~ 183 (499)
T TIGR01494 124 ---GKIAVVVYTGFETKTPLQPKLDRLSDIIFILFVLLIALAVFLFWAIGLWDPNSIFK-----------------IFLR 183 (499)
T ss_pred ---HHHHHHHHhcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHH-----------------HHHH
Confidence 1233444333332222 12222222 3344333333333333332221110 110 2456
Q ss_pred HHHHHHHHHHHhcCCchHHHHHHHHHHHHHH--Hhccccccccchhh
Q 003189 400 FFAIAVTIVVVAVPEGLPLAVTLSLAFAMKK--MMNDKALVRHLAAC 444 (840)
Q Consensus 400 ~~~~ai~ilvva~P~~Lplav~l~l~~~~~~--l~~~~ilvr~~~a~ 444 (840)
++...+...-.++|.++|++...+.....++ +.|+...+-.+..+
T Consensus 184 ~~~vl~~~~P~aL~~~~~~~~~~~~~~~~~~gilvk~~~~lE~l~~v 230 (499)
T TIGR01494 184 ALILLVIAIPIALPLAVTIALAVGDARLAKKGIVVRSLNALEELGKV 230 (499)
T ss_pred HHHHHHHhcCCcHHHHHHHHHHHHHHHHHHCCcEEechhhhhhccCC
Confidence 6777777888889999999999887776652 44554444444433
No 219
>PF15584 Imm44: Immunity protein 44
Probab=35.93 E-value=17 Score=31.39 Aligned_cols=20 Identities=25% Similarity=0.596 Sum_probs=15.8
Q ss_pred CCcEEEecCCCcccccEEEE
Q 003189 258 PGDIVHLCMGDQVPADGLFV 277 (840)
Q Consensus 258 vGDIV~l~~Gd~VPaDgvll 277 (840)
+.+-..|+.|++|||||+.-
T Consensus 13 ~~~~~~I~SG~~iP~~GIwE 32 (94)
T PF15584_consen 13 PSEGGVIKSGQEIPCDGIWE 32 (94)
T ss_pred CCCCCEEecCCCcccCCeEc
Confidence 34556788999999999864
No 220
>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=35.55 E-value=3.3e+02 Score=29.39 Aligned_cols=165 Identities=13% Similarity=0.178 Sum_probs=76.4
Q ss_pred CCHHHHHHHHHHHHHHHHc-ccceeEEEEEEcCCCCCCCCCCCCCceeeeeeecccCCCCcc--hHHHHHHHHhCCCEEE
Q 003189 604 LNEAAVNHLNETIEKFASE-ALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRPG--VKESVAICRSAGITVR 680 (840)
Q Consensus 604 l~~~~~~~~~~~~~~~~~~-glr~l~~A~~~~~~~~~~~~~~~~~~~~~lg~~~~~D~lR~~--~~~aI~~l~~aGi~v~ 680 (840)
+.++.++++.+.++.+..+ |.+. .+| ++..-|.+-.. ++...+.|++.||.+.
T Consensus 10 ~a~~i~~~i~~~v~~l~~~~g~~p-~La-----------------------~i~vg~~~~s~~Yv~~k~k~a~~~Gi~~~ 65 (296)
T PRK14188 10 FAADVRATVAAEVARLKAAHGVTP-GLA-----------------------VVLVGEDPASQVYVRSKGKQTKEAGMASF 65 (296)
T ss_pred HHHHHHHHHHHHHHHHHHccCCCC-eEE-----------------------EEEeCCChhHHHHHHHHHHHHHHcCCEEE
Confidence 3455667777777777655 5433 222 22233332222 3667889999999876
Q ss_pred EEc--CC-CHHHHHHHHHHcCCccC-CCcccc------------------ChhhhcCCHHHHhhhcCCceEEEecCcccH
Q 003189 681 MVT--GD-NINTAKAIARECGILTD-NGIAIE------------------GPEFREKSDEELSKLIPKIQVMARSSPMDK 738 (840)
Q Consensus 681 m~T--GD-~~~ta~~iA~~~Gi~~~-~~~~~~------------------g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K 738 (840)
+.. .+ ......+.-++++=+.. +++.+. .++.+-+++..+-.++.+-..|.-|||.-=
T Consensus 66 ~~~l~~~~~~~el~~~i~~lN~d~~V~GIlvq~Plp~~~~~~~i~~~I~p~KDVDGl~~~n~g~l~~~~~~~~PcTp~ai 145 (296)
T PRK14188 66 EHKLPADTSQAELLALIARLNADPAIHGILVQLPLPKHLDSEAVIQAIDPEKDVDGLHVVNAGRLATGETALVPCTPLGC 145 (296)
T ss_pred EEECCCCCCHHHHHHHHHHHhCCCCCcEEEEeCCCCCCCCHHHHHhccCcccccccCChhhHHHHhCCCCCCcCCCHHHH
Confidence 662 22 23334444444432221 122221 112222222223222222223444555444
Q ss_pred HHHHHHHHHh-CCCEEEEEc-CCccCHH---HhhhCCccEEecCC---CcHHHHhhcCEEec
Q 003189 739 HTLVKHLRTT-LGEVVAVTG-DGTNDAP---ALHEADIGLAMGIA---GTEVAKESADVIIL 792 (840)
Q Consensus 739 ~~~V~~l~~~-~g~~v~~~G-DG~ND~~---al~~Advgiamg~~---g~~~ak~~aDivll 792 (840)
.++++...-. .|..|+++| -+.--.| +|..++..+..-.+ ..+.+-..||+|+.
T Consensus 146 ~~ll~~~~i~~~Gk~V~viGrs~~mG~PmA~~L~~~g~tVtv~~~rT~~l~e~~~~ADIVIs 207 (296)
T PRK14188 146 MMLLRRVHGDLSGLNAVVIGRSNLVGKPMAQLLLAANATVTIAHSRTRDLPAVCRRADILVA 207 (296)
T ss_pred HHHHHHhCCCCCCCEEEEEcCCcchHHHHHHHHHhCCCEEEEECCCCCCHHHHHhcCCEEEE
Confidence 4444433211 278899998 3333333 34455555443311 11223345777764
No 221
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=34.30 E-value=20 Score=35.40 Aligned_cols=13 Identities=38% Similarity=0.450 Sum_probs=12.1
Q ss_pred EEecccCccccCc
Q 003189 453 ICSDKTGTLTTNH 465 (840)
Q Consensus 453 I~~DKTGTLT~n~ 465 (840)
+|||.+||||.+.
T Consensus 1 v~fD~DGTL~~~~ 13 (192)
T PF12710_consen 1 VIFDFDGTLTDSD 13 (192)
T ss_dssp EEEESBTTTBSSH
T ss_pred eEEecCcCeecCC
Confidence 6999999999987
No 222
>COG0272 Lig NAD-dependent DNA ligase (contains BRCT domain type II) [DNA replication, recombination, and repair]
Probab=34.06 E-value=78 Score=37.69 Aligned_cols=74 Identities=19% Similarity=0.296 Sum_probs=48.0
Q ss_pred ccCCCCCcEEEe-cCCCcccc-cEEEEeecceEEecccccCCCCccccCCCCCeEEeccEEeeceEEEEEEEEcccchHH
Q 003189 253 IYDLLPGDIVHL-CMGDQVPA-DGLFVSGFSVLINESSLTGESEPVNVNALNPFLLSGTKVQNGSCKMLVTTVGMRTQWG 330 (840)
Q Consensus 253 ~~dLvvGDIV~l-~~Gd~VPa-Dgvll~g~~l~VDES~LTGES~pv~k~~~~~~l~sGt~v~~G~~~~~V~~vG~~T~~g 330 (840)
-.||.+||.|.| ++||+||- ++++.+-. +|+..|..--...| ..||.+......+..-+++..+.-+
T Consensus 365 rkdIrIGDtV~V~kAGdVIP~V~~Vv~e~R---------~~~~~~~~~P~~CP--~C~s~l~r~~~e~~~rC~n~~~C~a 433 (667)
T COG0272 365 RKDIRIGDTVVVRKAGDVIPQVVGVVLEKR---------PGNEKPIPFPTHCP--VCGSELVREEGEVVIRCTNGLNCPA 433 (667)
T ss_pred hcCCCCCCEEEEEecCCCCcceeeeecccC---------CCCCCCCCCCCCCC--CCCCeeEeccCceeEecCCCCCChH
Confidence 489999999888 69999994 55444443 45555544222233 5688888766667777777555555
Q ss_pred HHHHhhc
Q 003189 331 KLMATLS 337 (840)
Q Consensus 331 ~i~~~~~ 337 (840)
+..+.+.
T Consensus 434 q~~e~l~ 440 (667)
T COG0272 434 QLKERLI 440 (667)
T ss_pred HHhhhee
Confidence 5555443
No 223
>TIGR00216 ispH_lytB (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming). Escherichia coli LytB protein had been found to regulate the activity of RelA (guanosine 3',5'-bispyrophosphate synthetase I), which in turn controls the level of a regulatory metabolite. It is involved in penicillin tolerance and the stringent response.
Probab=33.63 E-value=3.1e+02 Score=29.39 Aligned_cols=174 Identities=17% Similarity=0.229 Sum_probs=97.7
Q ss_pred EEEEEcCchHHHHHhcccccccCCceeeCCHHHHHHHHHHHHHHHHcccceeEEEEEEcCCCC-----CCCCC-CCC---
Q 003189 576 FRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEF-----SADAP-IPT--- 646 (840)
Q Consensus 576 ~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~glr~l~~A~~~~~~~~-----~~~~~-~~~--- 646 (840)
+.+.--|.|..+.+.-.. .+-..+.-+=..-.+++..+.+++++|+.++.+..+.-++-. ..+.. ..+
T Consensus 69 ViirAHGv~~~~~~~~~~---~gl~viDaTCP~V~kv~~~v~~~~~~Gy~iiiiG~~~HpEv~gi~g~~~~~~~vv~~~~ 145 (280)
T TIGR00216 69 VIIRAHGVPPEVREELEK---KGLEVIDATCPLVTKVHNAVKKYAKEGYHVILIGKKNHPEVIGTRGYAPDKAIVVETLE 145 (280)
T ss_pred EEEeCCCCCHHHHHHHHH---CCCeEEeCCCcccHHHHHHHHHHHhCCCEEEEEeCCCCCeeeeeccCcCCCEEEECCHH
Confidence 333445777776654331 111222223233457888999999999999999866544320 00000 000
Q ss_pred --C---ceeeeeeecccCCCCcchHHHHHHHHhCC----C----EEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhh
Q 003189 647 --E---GYTCIGIVGIKDPMRPGVKESVAICRSAG----I----TVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFR 713 (840)
Q Consensus 647 --~---~~~~lg~~~~~D~lR~~~~~aI~~l~~aG----i----~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~ 713 (840)
. ...-++++.=--..+.+..+.++.|++.. + .+.-.|-+....+..+|+++.+.-
T Consensus 146 d~~~l~~~~~v~vvsQTT~~~~~~~~i~~~l~~~~~~~~~~~~nTIC~AT~~RQ~a~~~la~~vD~mi------------ 213 (280)
T TIGR00216 146 DLENFKVEDLLGVVSQTTLSQEDTKEIVAELKARVPQKEVPVFNTICYATQNRQDAVKELAPEVDLMI------------ 213 (280)
T ss_pred HHHhCCCCCcEEEEEcCCCcHHHHHHHHHHHHHhCCCcCCCCCCCcccccHHHHHHHHHHHhhCCEEE------------
Confidence 0 01124555544445556667777777654 1 255667777777777777766532
Q ss_pred cCCHHHHhhhcCCceEEEecCcccHHHHHHHHHHhCCCEEEEEcCC-ccCHHHhhhCC-ccEEecCCCcH
Q 003189 714 EKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDG-TNDAPALHEAD-IGLAMGIAGTE 781 (840)
Q Consensus 714 ~~~~~~~~~~~~~~~v~ar~~P~~K~~~V~~l~~~~g~~v~~~GDG-~ND~~al~~Ad-vgiamg~~g~~ 781 (840)
|.+......=.++.+..++. |..+-.+.+. --|...|+..+ |||.-| ++|+
T Consensus 214 ---------------VVGg~nSsNT~rL~ei~~~~-~~~t~~Ie~~~el~~~~l~~~~~VGiTAG-ASTP 266 (280)
T TIGR00216 214 ---------------VIGGKNSSNTTRLYEIAEEH-GPPSYLIETAEELPEEWLKGVKVVGITAG-ASTP 266 (280)
T ss_pred ---------------EECCCCCchHHHHHHHHHHh-CCCEEEECChHHCCHHHhCCCCEEEEEec-CCCC
Confidence 55544455555667777766 7655555433 22556677554 799888 4443
No 224
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=32.56 E-value=9.9e+02 Score=30.46 Aligned_cols=176 Identities=14% Similarity=0.035 Sum_probs=83.5
Q ss_pred ECCeEEEEeccCCCCCcEEEecCCCcccccEEEEeecceEEecccccCCCCccccCCCCCeEEeccEEeeceEEEEEEEE
Q 003189 244 RNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNALNPFLLSGTKVQNGSCKMLVTTV 323 (840)
Q Consensus 244 RdG~~~~I~~~dLvvGDIV~l~~Gd~VPaDgvll~g~~l~VDES~LTGES~pv~k~~~~~~l~sGt~v~~G~~~~~V~~v 323 (840)
.-|....+..-|.+|.|.+.++ |+..=+|=-.+.|++.-++-. .|+..-+. .+. .+.+|+...-=...+.=|..
T Consensus 185 v~GDiV~l~~Gd~IPaD~~li~-g~~l~VdES~LTGES~pv~K~--~~~~n~v~--~GT-~v~~G~~~~iV~~tG~~T~~ 258 (941)
T TIGR01517 185 VVGDIVSLSTGDVVPADGVFIS-GLSLEIDESSITGESDPIKKG--APKDSFLL--SGT-VVNEGSGRMLVTAVGVNSFG 258 (941)
T ss_pred CCCCEEEECCCCEecccEEEEE-cCcEEEEecccCCCCCccccc--CCCCceEE--eCC-eEEeeEEEEEEEEeCCCcHH
Confidence 3588899999999999999985 445556666677776434322 13322222 223 46666533322222222222
Q ss_pred cccchHHHHHHhhcCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhcccCCCccccCCcChHHHHHHHHH
Q 003189 324 GMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAI 403 (840)
Q Consensus 324 G~~T~~g~i~~~~~~~~~~~tplq~~l~~~a~~~~~~~l~~a~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (840)
|.=. +.+........-+..+.+..+.+......+++++.++.++.++...............+ .....+..++..
T Consensus 259 gki~---~~~~~~~~~t~l~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~al~l 333 (941)
T TIGR01517 259 GKLM---MELRAEGEDTPLQEKLSELAGLIGKFGMGSAVLLFLVLSLRYVFRIIRGDGRDTEEDAQ--TFLDHFIIAVTI 333 (941)
T ss_pred HHHH---HhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccchhhH--HHHHHHHHHHHH
Confidence 2111 11111111222222233333344433333333333332222222211110000000000 011246667777
Q ss_pred HHHHHHHhcCCchHHHHHHHHHHHHHH
Q 003189 404 AVTIVVVAVPEGLPLAVTLSLAFAMKK 430 (840)
Q Consensus 404 ai~ilvva~P~~Lplav~l~l~~~~~~ 430 (840)
.+..+-.+.|.++++++..+.....++
T Consensus 334 lv~~iP~~Lp~~vti~l~~~~~~mak~ 360 (941)
T TIGR01517 334 VVVAVPEGLPLAVTIALAYSMKKMMKD 360 (941)
T ss_pred HHhhCCCchHHHHHHHHHHHHHHHHhC
Confidence 888888888999999998887665554
No 225
>PF01455 HupF_HypC: HupF/HypC family; InterPro: IPR001109 The large subunit of [NiFe]-hydrogenase, as well as other nickel metalloenzymes, is synthesised as a precursor devoid of the metalloenzyme active site. This precursor then undergoes a complex post-translational maturation process that requires a number of accessory proteins. The hydrogenase expression/formation proteins (HupF/HypC) form a family of small proteins that are hydrogenase precursor-specific chaperones required for this maturation process []. They are believed to keep the hydrogenase precursor in a conformation accessible for metal incorporation [, ].; PDB: 3D3R_A 2Z1C_C 2OT2_A.
Probab=32.50 E-value=1e+02 Score=25.24 Aligned_cols=32 Identities=31% Similarity=0.331 Sum_probs=24.1
Q ss_pred CceEEEEECCeEEEEec---cCCCCCcEEEecCCC
Q 003189 237 KITVQVARNGFRRKISI---YDLLPGDIVHLCMGD 268 (840)
Q Consensus 237 ~~~v~V~RdG~~~~I~~---~dLvvGDIV~l~~Gd 268 (840)
...+.|-.+|.+++|+. .++.|||-|.+..|-
T Consensus 16 ~~~A~v~~~G~~~~V~~~lv~~v~~Gd~VLVHaG~ 50 (68)
T PF01455_consen 16 GGMAVVDFGGVRREVSLALVPDVKVGDYVLVHAGF 50 (68)
T ss_dssp TTEEEEEETTEEEEEEGTTCTSB-TT-EEEEETTE
T ss_pred CCEEEEEcCCcEEEEEEEEeCCCCCCCEEEEecCh
Confidence 34677778999999975 468899999999984
No 226
>PRK14166 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=31.07 E-value=3.5e+02 Score=28.96 Aligned_cols=165 Identities=19% Similarity=0.221 Sum_probs=78.1
Q ss_pred CCHHHHHHHHHHHHHHHHcccceeEEEEEEcCCCCCCCCCCCCCceeeeeeecccCCCCcc--hHHHHHHHHhCCCEEEE
Q 003189 604 LNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRPG--VKESVAICRSAGITVRM 681 (840)
Q Consensus 604 l~~~~~~~~~~~~~~~~~~glr~l~~A~~~~~~~~~~~~~~~~~~~~~lg~~~~~D~lR~~--~~~aI~~l~~aGi~v~m 681 (840)
+.++.++++.+.++.+..+|.+. .+| ++-.-|.+-.. ++.-.+.|++.|+.+..
T Consensus 9 ~a~~i~~~l~~~v~~l~~~g~~P-~La-----------------------ii~vg~d~as~~Yv~~k~k~a~~~Gi~~~~ 64 (282)
T PRK14166 9 LSAKIKEELKEKNQFLKSKGIES-CLA-----------------------VILVGDNPASQTYVKSKAKACEECGIKSLV 64 (282)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCc-eEE-----------------------EEEeCCCHHHHHHHHHHHHHHHHcCCEEEE
Confidence 44566777888888887777544 222 22333333222 36678888899998666
Q ss_pred EcCCC---HHHHHHHHHHcCCccC-CCccccC------------------hhhhcCCHHHHhhhcCC-ceEEEecCcccH
Q 003189 682 VTGDN---INTAKAIARECGILTD-NGIAIEG------------------PEFREKSDEELSKLIPK-IQVMARSSPMDK 738 (840)
Q Consensus 682 ~TGD~---~~ta~~iA~~~Gi~~~-~~~~~~g------------------~~~~~~~~~~~~~~~~~-~~v~ar~~P~~K 738 (840)
+-=+. .+...+.=++++=+.. +++.+.- ++.+-+++..+..++.. -.-|.-|||.-=
T Consensus 65 ~~l~~~~t~~~l~~~I~~lN~D~~V~GIivq~PLP~~i~~~~i~~~I~p~KDVDGl~~~N~g~l~~g~~~~~~PcTp~av 144 (282)
T PRK14166 65 YHLNENTTQNELLALINTLNHDDSVHGILVQLPLPDHICKDLILESIISSKDVDGFHPINVGYLNLGLESGFLPCTPLGV 144 (282)
T ss_pred EECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhccCcccCcccCChhhhHHHhcCCCCCCcCCCHHHH
Confidence 64432 2333333344432211 1222211 11222222222222211 113444555544
Q ss_pred HHHHHHHHHh-CCCEEEEEcCCccC----HHHhhhCCccEEecCCCcH-H--HHhhcCEEec
Q 003189 739 HTLVKHLRTT-LGEVVAVTGDGTND----APALHEADIGLAMGIAGTE-V--AKESADVIIL 792 (840)
Q Consensus 739 ~~~V~~l~~~-~g~~v~~~GDG~ND----~~al~~Advgiamg~~g~~-~--ak~~aDivll 792 (840)
.++++...-. .|..|+++|-+..= +-+|...+.-+.+-.+-|. . .-..|||++.
T Consensus 145 i~lL~~y~i~l~Gk~vvVvGrS~iVGkPla~lL~~~~atVt~chs~T~nl~~~~~~ADIvIs 206 (282)
T PRK14166 145 MKLLKAYEIDLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKTKDLSLYTRQADLIIV 206 (282)
T ss_pred HHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHHHHHhhCCEEEE
Confidence 4444443211 27889999887552 3344444444433223332 2 2345788764
No 227
>cd00860 ThrRS_anticodon ThrRS Threonyl-anticodon binding domain. ThrRS belongs to class II aminoacyl-tRNA synthetases (aaRS). This alignment contains the anticodon binding domain, which is responsible for specificity in tRNA-binding, so that the activated amino acid is transferred to a ribose 3' OH group of the appropriate tRNA only.
Probab=30.10 E-value=94 Score=26.27 Aligned_cols=47 Identities=19% Similarity=0.191 Sum_probs=38.5
Q ss_pred eecccCCCCcchHHHHHHHHhCCCEEEE-EcCCCHHHHHHHHHHcCCc
Q 003189 654 IVGIKDPMRPGVKESVAICRSAGITVRM-VTGDNINTAKAIARECGIL 700 (840)
Q Consensus 654 ~~~~~D~lR~~~~~aI~~l~~aGi~v~m-~TGD~~~ta~~iA~~~Gi~ 700 (840)
++.+.+..++.+.+..+.|++.|+++.+ ..+.+...-..-|.+.|+.
T Consensus 6 ii~~~~~~~~~a~~~~~~Lr~~g~~v~~d~~~~~~~~~~~~a~~~g~~ 53 (91)
T cd00860 6 VIPVTDEHLDYAKEVAKKLSDAGIRVEVDLRNEKLGKKIREAQLQKIP 53 (91)
T ss_pred EEeeCchHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHcCCC
Confidence 3445667788899999999999999988 5777777888888999975
No 228
>PRK13111 trpA tryptophan synthase subunit alpha; Provisional
Probab=29.28 E-value=7e+02 Score=26.30 Aligned_cols=81 Identities=17% Similarity=0.224 Sum_probs=43.5
Q ss_pred CcchHHHHHHHHhCCCEEEE-EcCCC-HHHHHHHHHHcCCccC--CCccccChhhhcCCHHHHhhhcCCceEEEecCccc
Q 003189 662 RPGVKESVAICRSAGITVRM-VTGDN-INTAKAIARECGILTD--NGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMD 737 (840)
Q Consensus 662 R~~~~~aI~~l~~aGi~v~m-~TGD~-~~ta~~iA~~~Gi~~~--~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~ 737 (840)
-.+..+.++.|++.|+..+. +|-.. .+..+.+++...=.-. ...-++|. ....|.+
T Consensus 128 ~ee~~~~~~~~~~~gl~~I~lvap~t~~eri~~i~~~s~gfIY~vs~~GvTG~--------------------~~~~~~~ 187 (258)
T PRK13111 128 PEEAEELRAAAKKHGLDLIFLVAPTTTDERLKKIASHASGFVYYVSRAGVTGA--------------------RSADAAD 187 (258)
T ss_pred HHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHhCCCcEEEEeCCCCCCc--------------------ccCCCcc
Confidence 35677777788888876444 66655 3556666665421100 00001121 0122445
Q ss_pred HHHHHHHHHHhCCCEEEEEcCCccCH
Q 003189 738 KHTLVKHLRTTLGEVVAVTGDGTNDA 763 (840)
Q Consensus 738 K~~~V~~l~~~~g~~v~~~GDG~ND~ 763 (840)
-...++.+++. ...-.++|=|+++.
T Consensus 188 ~~~~i~~vk~~-~~~pv~vGfGI~~~ 212 (258)
T PRK13111 188 LAELVARLKAH-TDLPVAVGFGISTP 212 (258)
T ss_pred HHHHHHHHHhc-CCCcEEEEcccCCH
Confidence 55677788776 44555668888553
No 229
>PRK14174 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=28.72 E-value=4.4e+02 Score=28.46 Aligned_cols=165 Identities=14% Similarity=0.226 Sum_probs=81.0
Q ss_pred CCHHHHHHHHHHHHHHHHc-ccceeEEEEEEcCCCCCCCCCCCCCceeeeeeecccCCCCcc--hHHHHHHHHhCCCEEE
Q 003189 604 LNEAAVNHLNETIEKFASE-ALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRPG--VKESVAICRSAGITVR 680 (840)
Q Consensus 604 l~~~~~~~~~~~~~~~~~~-glr~l~~A~~~~~~~~~~~~~~~~~~~~~lg~~~~~D~lR~~--~~~aI~~l~~aGi~v~ 680 (840)
+.++.++++.+.++.+..+ |.+. .+ +++-.-|.+-.. ++...+.|++.||.+.
T Consensus 9 iA~~i~~~i~~~v~~l~~~~g~~P-~L-----------------------aii~vg~d~as~~Yv~~k~k~~~~~Gi~~~ 64 (295)
T PRK14174 9 VSLDLKNELKTRVEAYRAKTGKVP-GL-----------------------TVIIVGEDPASQVYVRNKAKSCKEIGMNST 64 (295)
T ss_pred HHHHHHHHHHHHHHHHHHccCCCC-eE-----------------------EEEEeCCChHHHHHHHHHHHHHHHcCCEEE
Confidence 3456667777777777655 4433 22 223333333222 3677889999999876
Q ss_pred EEcCCC---HHHHHHHHHHcCCccC-CCcccc------------------ChhhhcCCHHHHhhhcCCc--eEEEecCcc
Q 003189 681 MVTGDN---INTAKAIARECGILTD-NGIAIE------------------GPEFREKSDEELSKLIPKI--QVMARSSPM 736 (840)
Q Consensus 681 m~TGD~---~~ta~~iA~~~Gi~~~-~~~~~~------------------g~~~~~~~~~~~~~~~~~~--~v~ar~~P~ 736 (840)
.+-=+. .....+.=++++-+.. +++.+. .++.+-+++..+..++.+- .-|.-|||.
T Consensus 65 ~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvq~Plp~~id~~~i~~~I~p~KDVDGl~~~n~g~l~~~~~~~~~~PcTp~ 144 (295)
T PRK14174 65 VIELPADTTEEHLLKKIEDLNNDPDVHGILVQQPLPKQIDEFAVTLAIDPAKDVDGFHPENLGRLVMGHLDKCFVSCTPY 144 (295)
T ss_pred EEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhcCCccccccccChhhHHHHhcCCCCCCcCCCCHH
Confidence 653332 2233333344433221 122221 1122222222232222111 234456666
Q ss_pred cHHHHHHHHHHh-CCCEEEEEcCCccC----HHHhh------hCCccEEecCCCcHH--HHhhcCEEecc
Q 003189 737 DKHTLVKHLRTT-LGEVVAVTGDGTND----APALH------EADIGLAMGIAGTEV--AKESADVIILD 793 (840)
Q Consensus 737 ~K~~~V~~l~~~-~g~~v~~~GDG~ND----~~al~------~Advgiamg~~g~~~--ak~~aDivlld 793 (840)
-=.++++...-. .|..|.++|-+..= +-||. .|.|-++.- ...+. .-..||+++..
T Consensus 145 ail~ll~~y~i~l~Gk~vvViGrS~iVG~Pla~lL~~~~~~~~atVt~~hs-~t~~l~~~~~~ADIvI~A 213 (295)
T PRK14174 145 GILELLGRYNIETKGKHCVVVGRSNIVGKPMANLMLQKLKESNCTVTICHS-ATKDIPSYTRQADILIAA 213 (295)
T ss_pred HHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHhccccCCCEEEEEeC-CchhHHHHHHhCCEEEEe
Confidence 544444443211 27899999988552 22332 366666654 22222 34668888743
No 230
>COG2608 CopZ Copper chaperone [Inorganic ion transport and metabolism]
Probab=28.71 E-value=4.8 Score=33.27 Aligned_cols=55 Identities=13% Similarity=0.131 Sum_probs=45.1
Q ss_pred ccchhhhHHHHHhhhhhhhhHhHhhhhhhhhhhcccCCCCccccccccccCCcccCh
Q 003189 44 NLSKRFEAEAIRRSNQEKFRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQICP 100 (840)
Q Consensus 44 ~~~~~~e~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 100 (840)
-|....++++....++..+.|++....+.+.|+.. ..+...+.+++..+||.+.+
T Consensus 15 ~C~~~V~~al~~v~gv~~v~v~l~~~~~~V~~d~~--~~~~~~i~~ai~~aGy~~~~ 69 (71)
T COG2608 15 HCVKTVEKALEEVDGVASVDVDLEKGTATVTFDSN--KVDIEAIIEAIEDAGYKVEE 69 (71)
T ss_pred HHHHHHHHHHhcCCCeeEEEEEcccCeEEEEEcCC--cCCHHHHHHHHHHcCCCeee
Confidence 45567788889999999999999998899998765 56777888889999997643
No 231
>PRK11507 ribosome-associated protein; Provisional
Probab=28.60 E-value=66 Score=26.56 Aligned_cols=26 Identities=19% Similarity=0.233 Sum_probs=21.6
Q ss_pred EEEECCeEEEEeccCCCCCcEEEecC
Q 003189 241 QVARNGFRRKISIYDLLPGDIVHLCM 266 (840)
Q Consensus 241 ~V~RdG~~~~I~~~dLvvGDIV~l~~ 266 (840)
.|..||+...-.-..|.+||+|.+.-
T Consensus 38 ~V~VNGeve~rRgkKl~~GD~V~~~g 63 (70)
T PRK11507 38 QVKVDGAVETRKRCKIVAGQTVSFAG 63 (70)
T ss_pred ceEECCEEecccCCCCCCCCEEEECC
Confidence 35569998888899999999999743
No 232
>PRK14169 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=28.37 E-value=5.1e+02 Score=27.74 Aligned_cols=56 Identities=18% Similarity=0.285 Sum_probs=33.2
Q ss_pred CCHHHHHHHHHHHHHHHHcccceeEEEEEEcCCCCCCCCCCCCCceeeeeeecccCCCCcc--hHHHHHHHHhCCCEEEE
Q 003189 604 LNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRPG--VKESVAICRSAGITVRM 681 (840)
Q Consensus 604 l~~~~~~~~~~~~~~~~~~glr~l~~A~~~~~~~~~~~~~~~~~~~~~lg~~~~~D~lR~~--~~~aI~~l~~aGi~v~m 681 (840)
+.++.++++.+.++.+..+|.+. .+| ++..-|..-.. ++.-.+.|++.|+.+.+
T Consensus 9 va~~i~~~l~~~v~~l~~~g~~P-~La-----------------------ii~vg~d~as~~Yv~~k~k~a~~~Gi~~~~ 64 (282)
T PRK14169 9 VSKKILADLKQTVAKLAQQDVTP-TLA-----------------------VVLVGSDPASEVYVRNKQRRAEDIGVRSLM 64 (282)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCC-eEE-----------------------EEEeCCChhHHHHHHHHHHHHHHcCCEEEE
Confidence 44566677777788877666543 232 22223322222 36678888999998766
Q ss_pred Ec
Q 003189 682 VT 683 (840)
Q Consensus 682 ~T 683 (840)
..
T Consensus 65 ~~ 66 (282)
T PRK14169 65 FR 66 (282)
T ss_pred EE
Confidence 53
No 233
>CHL00200 trpA tryptophan synthase alpha subunit; Provisional
Probab=28.32 E-value=3.4e+02 Score=28.74 Aligned_cols=90 Identities=12% Similarity=0.193 Sum_probs=50.4
Q ss_pred ccCCCCcchHHHHHHHHhCCCE-EEEEcCCC-HHHHHHHHHHcC-CccC-CCccccChhhhcCCHHHHhhhcCCceEEEe
Q 003189 657 IKDPMRPGVKESVAICRSAGIT-VRMVTGDN-INTAKAIARECG-ILTD-NGIAIEGPEFREKSDEELSKLIPKIQVMAR 732 (840)
Q Consensus 657 ~~D~lR~~~~~aI~~l~~aGi~-v~m~TGD~-~~ta~~iA~~~G-i~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar 732 (840)
+-|-+=++..+.++.|++.|+. +.+++=.. .+..+.+++... ..-- ...-++|.. .
T Consensus 125 ipDLP~ee~~~~~~~~~~~gi~~I~lv~PtT~~eri~~i~~~a~gFIY~vS~~GvTG~~--------------------~ 184 (263)
T CHL00200 125 IPDLPYEESDYLISVCNLYNIELILLIAPTSSKSRIQKIARAAPGCIYLVSTTGVTGLK--------------------T 184 (263)
T ss_pred ecCCCHHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHhCCCcEEEEcCCCCCCCC--------------------c
Confidence 3444446777888888888885 55566554 456667777664 2210 001112211 0
Q ss_pred cCcccHHHHHHHHHHhCCCEEEEEcCCccCHHHhh
Q 003189 733 SSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALH 767 (840)
Q Consensus 733 ~~P~~K~~~V~~l~~~~g~~v~~~GDG~ND~~al~ 767 (840)
..|.+-..+++.+++. -..-.++|=|+|+....+
T Consensus 185 ~~~~~~~~~i~~ir~~-t~~Pi~vGFGI~~~e~~~ 218 (263)
T CHL00200 185 ELDKKLKKLIETIKKM-TNKPIILGFGISTSEQIK 218 (263)
T ss_pred cccHHHHHHHHHHHHh-cCCCEEEECCcCCHHHHH
Confidence 1234456777777776 344445699999554433
No 234
>cd05017 SIS_PGI_PMI_1 The members of this protein family contain the SIS (Sugar ISomerase) domain and have both the phosphoglucose isomerase (PGI) and the phosphomannose isomerase (PMI) functions. These functions catalyze the reversible reactions of glucose 6-phosphate to fructose 6-phosphate, and mannose 6-phosphate to fructose 6-phosphate, respectively at an equal rate. This protein contains two SIS domains. This alignment is based on the first SIS domain.
Probab=28.32 E-value=94 Score=28.25 Aligned_cols=38 Identities=18% Similarity=0.240 Sum_probs=29.4
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCC
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGI 699 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi 699 (840)
---+++.++++.+++.|++++.+|++.. -...+.+.|+
T Consensus 54 G~t~e~i~~~~~a~~~g~~iI~IT~~~~--l~~~~~~~~~ 91 (119)
T cd05017 54 GNTEETLSAVEQAKERGAKIVAITSGGK--LLEMAREHGV 91 (119)
T ss_pred CCCHHHHHHHHHHHHCCCEEEEEeCCch--HHHHHHHcCC
Confidence 3457889999999999999999998874 3445665554
No 235
>PRK01045 ispH 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Reviewed
Probab=27.90 E-value=3.6e+02 Score=29.12 Aligned_cols=174 Identities=11% Similarity=0.147 Sum_probs=90.7
Q ss_pred EEEEEcCchHHHHHhcccccccCCceeeCCHHHHHHHHHHHHHHHHcccceeEEEEEEcCCCC-----CCCC--------
Q 003189 576 FRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEF-----SADA-------- 642 (840)
Q Consensus 576 ~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~glr~l~~A~~~~~~~~-----~~~~-------- 642 (840)
+.+.--|.|..+...-.. .+-..+.-+=..-.++++.+.+++++|+.++.+..+.-++-. ....
T Consensus 69 ViirAHGv~~~~~~~~~~---~g~~viDaTCP~V~k~~~~v~~~~~~Gy~vvi~G~~~HpEv~gi~g~~~~~~~vv~~~~ 145 (298)
T PRK01045 69 VIFSAHGVSPAVREEAKE---RGLTVIDATCPLVTKVHKEVARMSREGYEIILIGHKGHPEVEGTMGQAPGGVYLVESPE 145 (298)
T ss_pred EEEeCCCCCHHHHHHHHH---CCCeEEeCCCccchHHHHHHHHHHhCCCEEEEEeCCCCCeeeeeccCcCCCEEEEcCHH
Confidence 334445777776654331 111222222223456888899999999999999865543320 0000
Q ss_pred ---CCCCCceeeeeeecccCCCCcchHHHHHHHHhCCCE--------EEEEcCCCHHHHHHHHHHcCCccCCCccccChh
Q 003189 643 ---PIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGIT--------VRMVTGDNINTAKAIARECGILTDNGIAIEGPE 711 (840)
Q Consensus 643 ---~~~~~~~~~lg~~~~~D~lR~~~~~aI~~l~~aGi~--------v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~ 711 (840)
.....+..-++++.=--..+.+..+.++.+++..-. +...|-+....+..+|+++...-
T Consensus 146 e~~~l~~~~~~~v~vvsQTT~~~~~~~~i~~~l~~~~~~~~v~~~nTIC~aT~~RQ~a~~~La~~vD~mi---------- 215 (298)
T PRK01045 146 DVAKLEVKDPDKLALVTQTTLSVDDTAEIIAALKERFPEIQGPPKDDICYATQNRQEAVKELAPQADLVI---------- 215 (298)
T ss_pred HHhhcccCCCCcEEEEEcCCCcHHHHHHHHHHHHHhCcCcccCCCCCcchhhHHHHHHHHHHHhhCCEEE----------
Confidence 000011122444443333444555555555554322 23355566666666666555431
Q ss_pred hhcCCHHHHhhhcCCceEEEecCcccHHHHHHHHHHhCCCEEEEEcCC-ccCHHHhhhC-CccEEecCCCcH
Q 003189 712 FREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDG-TNDAPALHEA-DIGLAMGIAGTE 781 (840)
Q Consensus 712 ~~~~~~~~~~~~~~~~~v~ar~~P~~K~~~V~~l~~~~g~~v~~~GDG-~ND~~al~~A-dvgiamg~~g~~ 781 (840)
|.+......=.++.+..++. |..+-.+.+- --|...|+.. .|||.-| +.|+
T Consensus 216 -----------------VVGg~~SsNT~kL~~i~~~~-~~~t~~Ie~~~el~~~~l~~~~~VGitaG-ASTP 268 (298)
T PRK01045 216 -----------------VVGSKNSSNSNRLREVAEEA-GAPAYLIDDASEIDPEWFKGVKTVGVTAG-ASAP 268 (298)
T ss_pred -----------------EECCCCCccHHHHHHHHHHH-CCCEEEECChHHCcHHHhcCCCEEEEEec-CCCC
Confidence 55544444555666767766 7555555432 2244566644 5899888 4444
No 236
>TIGR00486 YbgI_SA1388 dinuclear metal center protein, YbgI/SA1388 family. The characterization of this family of uncharacterized proteins as orthologous is tentative. Members are found in all three domains of life. Several members (from Bacillus subtilis, Listeria monocytogenes, and Mycobacterium tuberculosis - all classified as Firmicutes within the Eubacteria) share a long insert relative to other members.
Probab=27.82 E-value=6.5e+02 Score=26.29 Aligned_cols=105 Identities=18% Similarity=0.294 Sum_probs=65.3
Q ss_pred HHHHHHHHhCCCEEEEEcCCCH-----HHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEec-CcccHH
Q 003189 666 KESVAICRSAGITVRMVTGDNI-----NTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARS-SPMDKH 739 (840)
Q Consensus 666 ~~aI~~l~~aGi~v~m~TGD~~-----~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~-~P~~K~ 739 (840)
++-++.|.+.||.++-. -+|. .....+|+.+|+.... .+.. ..+-.+++. .|..-.
T Consensus 81 ~~~~~~li~~~I~vy~~-Ht~lD~~~~G~n~~La~~Lgl~~~~--~~~~---------------~g~G~vg~l~~~~~~~ 142 (249)
T TIGR00486 81 PGRLKILLQNDISLYSA-HTNLDAHDGGNNDALARALGLENPK--EFED---------------YGLGRVGEFKAPIESL 142 (249)
T ss_pred HHHHHHHHHCCCeEEEe-ecchhcCCCCHHHHHHHHcCCCccc--cccC---------------CCceeEEECCCCCCHH
Confidence 33488999999976543 2232 2466799999986421 0000 011244555 566677
Q ss_pred HHHHHHHHhCC-CEEEEEcCCccCHHHhhhCCccEEecCCCcHH----HHhhcCEEeccC
Q 003189 740 TLVKHLRTTLG-EVVAVTGDGTNDAPALHEADIGLAMGIAGTEV----AKESADVIILDD 794 (840)
Q Consensus 740 ~~V~~l~~~~g-~~v~~~GDG~ND~~al~~Advgiamg~~g~~~----ak~~aDivlldd 794 (840)
.+++.+++.+| ..+-++|++.. +---|+|+-| +|.+. ++..+|+.|..|
T Consensus 143 ~~~~~vk~~l~~~~vr~~~~~~~-----~i~rVAi~~G-sG~~~~~~a~~~gaD~~ITGd 196 (249)
T TIGR00486 143 EEVLEIKKVLNVKPLLVVKNGPE-----YVKKVAVVSG-SGLSFIMKALREGVDAYITGD 196 (249)
T ss_pred HHHHHHHHHhCCCCEEEeCCCCC-----ceeEEEEEcC-chHHHHHHHHHcCCCEEEecC
Confidence 88888888777 55677786421 2335888888 66653 334589999876
No 237
>TIGR00381 cdhD CO dehydrogenase/acetyl-CoA synthase, delta subunit. This is the small subunit of a heterodimer which catalyzes the reaction CO + H2O + Acceptor = CO2 + Reduced acceptor and is involved in the synthesis of acetyl-CoA from CO2 and H2.
Probab=27.78 E-value=2.3e+02 Score=31.58 Aligned_cols=138 Identities=14% Similarity=0.129 Sum_probs=70.5
Q ss_pred hHHHHHHHHhCCCEEEEEcCCCH----------HHHHHHHHHcCCccCCCccccChhhhcCCHHHHh---hhcCC-ceEE
Q 003189 665 VKESVAICRSAGITVRMVTGDNI----------NTAKAIARECGILTDNGIAIEGPEFREKSDEELS---KLIPK-IQVM 730 (840)
Q Consensus 665 ~~~aI~~l~~aGi~v~m~TGD~~----------~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~---~~~~~-~~v~ 730 (840)
++..++.++.-.|-++..|||.. .+++.++..+++. +++.|..-...+.+-+. +.+.. -.++
T Consensus 145 ak~~V~~~~aD~Ialr~~S~DP~~~d~~~~e~a~~vk~V~~av~vP----LIL~gsg~~~kD~eVLeaaLe~~~G~kpLL 220 (389)
T TIGR00381 145 ARKCVKEFGADMVTIHLISTDPKLDDKSPSEAAKVLEDVLQAVDVP----IVIGGSGNPEKDPLVLEKAAEVAEGERCLL 220 (389)
T ss_pred HHHHHHHhCCCEEEEEecCCCccccccCHHHHHHHHHHHHHhCCCC----EEEeCCCCCcCCHHHHHHHHHHhCCCCcEE
Confidence 34445666666677888888875 2333444444432 45554422222222222 22222 2356
Q ss_pred EecCcccHHHHHHHHHHhCCCEEEEEc-CCccCHHHhhhCCccEEecCCCcHHHHhhcCEEeccCCchHHHHHHHHHHHH
Q 003189 731 ARSSPMDKHTLVKHLRTTLGEVVAVTG-DGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSV 809 (840)
Q Consensus 731 ar~~P~~K~~~V~~l~~~~g~~v~~~G-DG~ND~~al~~Advgiamg~~g~~~ak~~aDivlldd~f~~i~~~i~~gR~~ 809 (840)
...+.++...-+-.+-..||+.|++.+ |..|.+--|..- +- .+|. ...||| +|.+-..+-.-++.+-..
T Consensus 221 ~SAt~e~Ny~~ia~lAk~yg~~Vvv~s~~Din~ak~Ln~k-L~-~~Gv-------~~eDIV-lDP~t~alG~Gieya~s~ 290 (389)
T TIGR00381 221 ASANLDLDYEKIANAAKKYGHVVLSWTIMDINMQKTLNRY-LL-KRGL-------MPRDIV-MDPTTCALGYGIEFSITN 290 (389)
T ss_pred EecCchhhHHHHHHHHHHhCCeEEEEcCCcHHHHHHHHHH-HH-HcCC-------CHHHEE-EcCCCccccCCHHHHHHH
Confidence 666767444444444444598777666 777766555332 00 2231 123554 455555555566666666
Q ss_pred HHHHHHH
Q 003189 810 YINIQKF 816 (840)
Q Consensus 810 ~~~i~k~ 816 (840)
+.+||..
T Consensus 291 ~erIRra 297 (389)
T TIGR00381 291 MERIRLS 297 (389)
T ss_pred HHHHHHH
Confidence 6666653
No 238
>PRK14167 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=27.68 E-value=4.6e+02 Score=28.33 Aligned_cols=164 Identities=18% Similarity=0.211 Sum_probs=79.2
Q ss_pred CCHHHHHHHHHHHHHHHHcccceeEEEEEEcCCCCCCCCCCCCCceeeeeeecccCCCCcc--hHHHHHHHHhCCCEEEE
Q 003189 604 LNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRPG--VKESVAICRSAGITVRM 681 (840)
Q Consensus 604 l~~~~~~~~~~~~~~~~~~glr~l~~A~~~~~~~~~~~~~~~~~~~~~lg~~~~~D~lR~~--~~~aI~~l~~aGi~v~m 681 (840)
+.++.++++.+.++.+...|.+. .+ +++-..|.+-.. ++...+.|++.|+.+.+
T Consensus 10 vA~~i~~~l~~~v~~l~~~g~~P-~L-----------------------aiI~vg~d~as~~Yv~~k~k~~~~~Gi~~~~ 65 (297)
T PRK14167 10 VAAQIRDDLTDAIETLEDAGVTP-GL-----------------------ATVLMSDDPASETYVSMKQRDCEEVGIEAID 65 (297)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCc-eE-----------------------EEEEeCCCHHHHHHHHHHHHHHHHcCCEEEE
Confidence 44566777777778777666543 22 233333333222 36678889999998765
Q ss_pred EcCCC---HHHHHHHHHHcCCccC-CCccccC------------------hhhhcCCHHHHhhhcCCceEEEecCcccHH
Q 003189 682 VTGDN---INTAKAIARECGILTD-NGIAIEG------------------PEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (840)
Q Consensus 682 ~TGD~---~~ta~~iA~~~Gi~~~-~~~~~~g------------------~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~ 739 (840)
+-=.. .......=++++=+.. +++.+.- ++.+-+++..+..++..-.-|.-|||.-=.
T Consensus 66 ~~l~~~~~~~el~~~I~~lN~D~~V~GIlvq~PLP~~i~~~~i~~~I~p~KDVDGl~~~n~g~l~~g~~~~~PcTp~avi 145 (297)
T PRK14167 66 VEIDPDAPAEELYDTIDELNADEDVHGILVQMPVPDHVDDREVLRRIDPAKDVDGFHPENVGRLVAGDARFKPCTPHGIQ 145 (297)
T ss_pred EECCCCCCHHHHHHHHHHHhCCCCCCEEEEcCCCCCCCCHHHHHhccCcccCcccCChhhhHHHhCCCCCCCCCCHHHHH
Confidence 44332 2223333344432211 1222211 112222232233332222234445665545
Q ss_pred HHHHHHHHh-CCCEEEEEcCCccC----HHHhhh------CCccEEecCCCcHH--HHhhcCEEec
Q 003189 740 TLVKHLRTT-LGEVVAVTGDGTND----APALHE------ADIGLAMGIAGTEV--AKESADVIIL 792 (840)
Q Consensus 740 ~~V~~l~~~-~g~~v~~~GDG~ND----~~al~~------Advgiamg~~g~~~--ak~~aDivll 792 (840)
++++.++-. .|..|.++|-+..= +-+|.. |-|-++-. ...+. .-..|||++.
T Consensus 146 ~lL~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~~~~~aTVtvchs-~T~~l~~~~~~ADIvIs 210 (297)
T PRK14167 146 KLLAAAGVDTEGADVVVVGRSDIVGKPMANLLIQKADGGNATVTVCHS-RTDDLAAKTRRADIVVA 210 (297)
T ss_pred HHHHHhCCCCCCCEEEEECCCcccHHHHHHHHhcCccCCCCEEEEeCC-CCCCHHHHHhhCCEEEE
Confidence 555444321 27899999987542 234432 44555533 22222 3356888875
No 239
>PRK14182 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=25.55 E-value=5.3e+02 Score=27.64 Aligned_cols=56 Identities=18% Similarity=0.272 Sum_probs=34.4
Q ss_pred CCHHHHHHHHHHHHHHHHcccceeEEEEEEcCCCCCCCCCCCCCceeeeeeecccCCCCcc--hHHHHHHHHhCCCEEEE
Q 003189 604 LNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRPG--VKESVAICRSAGITVRM 681 (840)
Q Consensus 604 l~~~~~~~~~~~~~~~~~~glr~l~~A~~~~~~~~~~~~~~~~~~~~~lg~~~~~D~lR~~--~~~aI~~l~~aGi~v~m 681 (840)
+.++.++++.+.++.+..+|.+. .+ +++..-|.+-.. ++...+.|++.|+.+..
T Consensus 9 iA~~i~~~ik~~v~~l~~~g~~P-~L-----------------------aiI~vg~d~as~~Yv~~k~k~a~~~Gi~~~~ 64 (282)
T PRK14182 9 IAAKVKGEVATEVRALAARGVQT-GL-----------------------TVVRVGDDPASAIYVRGKRKDCEEVGITSVE 64 (282)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCC-eE-----------------------EEEEeCCCHHHHHHHHHHHHHHHHcCCEEEE
Confidence 44566777888888887766543 22 333333333222 35678889999998766
Q ss_pred Ec
Q 003189 682 VT 683 (840)
Q Consensus 682 ~T 683 (840)
+-
T Consensus 65 ~~ 66 (282)
T PRK14182 65 HH 66 (282)
T ss_pred EE
Confidence 44
No 240
>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.
Probab=25.48 E-value=2.2e+02 Score=36.65 Aligned_cols=41 Identities=17% Similarity=0.205 Sum_probs=31.4
Q ss_pred CCeEEEEeccCCCCCcEEEecCCCcccccEEEEeecceEEec
Q 003189 245 NGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINE 286 (840)
Q Consensus 245 dG~~~~I~~~dLvvGDIV~l~~Gd~VPaDgvll~g~~l~VDE 286 (840)
-|....+..-|.+|-|...++. ..+=+|=-.+.|++.-|+-
T Consensus 138 pGDIv~L~~Gd~VPAD~rLi~~-~~L~VDES~LTGES~pV~K 178 (1053)
T TIGR01523 138 PGDICLLKTGDTIPADLRLIET-KNFDTDEALLTGESLPVIK 178 (1053)
T ss_pred CCCEEEECCCCEeeccEEEEEe-CceEEEchhhcCCCCceec
Confidence 4778889999999999999984 4566777777787755544
No 241
>PRK14176 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=25.29 E-value=5.6e+02 Score=27.55 Aligned_cols=71 Identities=14% Similarity=0.154 Sum_probs=40.2
Q ss_pred CCHHHHHHHHHHHHHHHHc-ccceeEEEEEEcCCCCCCCCCCCCCceeeeeeecccCCCCcc--hHHHHHHHHhCCCEEE
Q 003189 604 LNEAAVNHLNETIEKFASE-ALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRPG--VKESVAICRSAGITVR 680 (840)
Q Consensus 604 l~~~~~~~~~~~~~~~~~~-glr~l~~A~~~~~~~~~~~~~~~~~~~~~lg~~~~~D~lR~~--~~~aI~~l~~aGi~v~ 680 (840)
+.++.++++.+.++.+..+ |.+. .+| ++-..|.+-.. ++.-.+.|++.|+.+.
T Consensus 16 iA~~i~~~l~~~i~~l~~~~g~~P-~La-----------------------ii~vg~d~aS~~Yv~~k~k~~~~~Gi~~~ 71 (287)
T PRK14176 16 LAKKIEAEVRSGVERLKSNRGITP-GLA-----------------------TILVGDDPASKMYVRLKHKACERVGIRAE 71 (287)
T ss_pred HHHHHHHHHHHHHHHHHhccCCCC-eEE-----------------------EEEECCCcchHHHHHHHHHHHHHcCCEEE
Confidence 4456667777778877665 5432 332 33333333333 3677889999999876
Q ss_pred EEcCCC---HHHHHHHHHHcC
Q 003189 681 MVTGDN---INTAKAIARECG 698 (840)
Q Consensus 681 m~TGD~---~~ta~~iA~~~G 698 (840)
...=.. .+...+.=++++
T Consensus 72 ~~~l~~~~~~~el~~~I~~LN 92 (287)
T PRK14176 72 DQFLPADTTQEELLELIDSLN 92 (287)
T ss_pred EEECCCCCCHHHHHHHHHHHh
Confidence 654432 333344445553
No 242
>COG0078 ArgF Ornithine carbamoyltransferase [Amino acid transport and metabolism]
Probab=25.29 E-value=2.9e+02 Score=29.75 Aligned_cols=84 Identities=21% Similarity=0.307 Sum_probs=51.9
Q ss_pred cchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCcccHHHHH
Q 003189 663 PGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLV 742 (840)
Q Consensus 663 ~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~~V 742 (840)
.|+...+.++ +..+|+=+....+...+|+..+++ |++|-.= ...|-|-+.=+
T Consensus 90 ~DTArVLsr~----~D~I~~R~~~~~~ve~lA~~s~VP-----ViNgLtD-------------------~~HP~Q~LADl 141 (310)
T COG0078 90 KDTARVLSRM----VDAIMIRGFSHETLEELAKYSGVP-----VINGLTD-------------------EFHPCQALADL 141 (310)
T ss_pred HHHHHHHHhh----hheEEEecccHHHHHHHHHhCCCc-----eEccccc-------------------ccCcHHHHHHH
Confidence 3444555554 567899999999999999999986 2333211 11355554444
Q ss_pred HHHHHhC----CCEEEEEcCCccCHH--HhhhCCccEE
Q 003189 743 KHLRTTL----GEVVAVTGDGTNDAP--ALHEADIGLA 774 (840)
Q Consensus 743 ~~l~~~~----g~~v~~~GDG~ND~~--al~~Advgia 774 (840)
..+++++ |.+++++|||.|=+- ++..|-.|+-
T Consensus 142 ~Ti~E~~g~l~g~k~a~vGDgNNv~nSl~~~~a~~G~d 179 (310)
T COG0078 142 MTIKEHFGSLKGLKLAYVGDGNNVANSLLLAAAKLGMD 179 (310)
T ss_pred HHHHHhcCcccCcEEEEEcCcchHHHHHHHHHHHhCCe
Confidence 4555554 579999999966433 3344444443
No 243
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=25.27 E-value=2.7e+02 Score=29.54 Aligned_cols=22 Identities=18% Similarity=0.172 Sum_probs=19.6
Q ss_pred CEEEEEcCCc-cCHHHhhhCCcc
Q 003189 751 EVVAVTGDGT-NDAPALHEADIG 772 (840)
Q Consensus 751 ~~v~~~GDG~-ND~~al~~Advg 772 (840)
+.+.|+||.. .|..+-+.|++-
T Consensus 220 ~~~lmIGD~~~tDI~~A~~aGi~ 242 (279)
T TIGR01452 220 ARTLMVGDRLETDILFGHRCGMT 242 (279)
T ss_pred hhEEEECCChHHHHHHHHHcCCc
Confidence 6899999995 999999999875
No 244
>PRK14184 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=25.24 E-value=6.1e+02 Score=27.24 Aligned_cols=164 Identities=16% Similarity=0.246 Sum_probs=80.1
Q ss_pred CCHHHHHHHHHHHHHHHHc-ccceeEEEEEEcCCCCCCCCCCCCCceeeeeeecccCCCCcc--hHHHHHHHHhCCCEEE
Q 003189 604 LNEAAVNHLNETIEKFASE-ALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRPG--VKESVAICRSAGITVR 680 (840)
Q Consensus 604 l~~~~~~~~~~~~~~~~~~-glr~l~~A~~~~~~~~~~~~~~~~~~~~~lg~~~~~D~lR~~--~~~aI~~l~~aGi~v~ 680 (840)
+.++.++++.+.++.+..+ |.+. .+| ++-.-|.+-.. ++.-++.|++.|+.+.
T Consensus 9 iA~~i~~~l~~~v~~l~~~~g~~P-~La-----------------------ii~vg~d~as~~Yv~~k~k~~~~~Gi~~~ 64 (286)
T PRK14184 9 TAATIREELKTEVAALTARHGRAP-GLA-----------------------VILVGEDPASQVYVRNKERACEDAGIVSE 64 (286)
T ss_pred HHHHHHHHHHHHHHHHHhccCCCC-EEE-----------------------EEEeCCChhHHHHHHHHHHHHHHcCCEEE
Confidence 4456667777778777665 5432 332 33333333222 3567888999999876
Q ss_pred EEc--CCC-HHHHHHHHHHcCCccC-CCcccc------------------ChhhhcCCHHHHhhhcCCceEEEecCcccH
Q 003189 681 MVT--GDN-INTAKAIARECGILTD-NGIAIE------------------GPEFREKSDEELSKLIPKIQVMARSSPMDK 738 (840)
Q Consensus 681 m~T--GD~-~~ta~~iA~~~Gi~~~-~~~~~~------------------g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K 738 (840)
.+- .|- .+...+.=++++=+.. +++.+. .++.+-+++..+..++..-.-|.-|||.-=
T Consensus 65 ~~~l~~~~~~~~l~~~I~~lN~d~~V~GIlvqlPLP~~id~~~i~~~I~p~KDVDGl~~~N~g~l~~~~~~~~PcTp~av 144 (286)
T PRK14184 65 AFRLPADTTQEELEDLIAELNARPDIDGILLQLPLPKGLDSQRCLELIDPAKDVDGFHPENMGRLALGLPGFRPCTPAGV 144 (286)
T ss_pred EEECCCCCCHHHHHHHHHHHhCCCcCceEEEecCCCCCCCHHHHHhccCcccCcccCCHhhHHHHhCCCCCCCCCCHHHH
Confidence 653 222 2333444444432211 122221 122222333333333222223455666654
Q ss_pred HHHHHHHHHh-CCCEEEEEcCCccC----HHHhhh------CCccEEecCCCcHH--HHhhcCEEec
Q 003189 739 HTLVKHLRTT-LGEVVAVTGDGTND----APALHE------ADIGLAMGIAGTEV--AKESADVIIL 792 (840)
Q Consensus 739 ~~~V~~l~~~-~g~~v~~~GDG~ND----~~al~~------Advgiamg~~g~~~--ak~~aDivll 792 (840)
.++++...-. .|..|.++|-+..= +-+|.. |.|-++.. ...+. .-..||+++.
T Consensus 145 ~~lL~~~~i~l~Gk~vvViGrS~iVG~Pla~lL~~~~~~~~AtVt~~hs-~t~~l~~~~~~ADIVI~ 210 (286)
T PRK14184 145 MTLLERYGLSPAGKKAVVVGRSNIVGKPLALMLGAPGKFANATVTVCHS-RTPDLAEECREADFLFV 210 (286)
T ss_pred HHHHHHhCCCCCCCEEEEECCCccchHHHHHHHhCCcccCCCEEEEEeC-CchhHHHHHHhCCEEEE
Confidence 4444443211 27889999887541 234433 55666553 32222 3456888764
No 245
>PRK14178 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=25.01 E-value=5.4e+02 Score=27.51 Aligned_cols=128 Identities=20% Similarity=0.304 Sum_probs=62.3
Q ss_pred hHHHHHHHHhCCCEEEEE--cCC-CHHHHHHHHHHcCCccC-CCcccc------------------ChhhhcCCHHHHhh
Q 003189 665 VKESVAICRSAGITVRMV--TGD-NINTAKAIARECGILTD-NGIAIE------------------GPEFREKSDEELSK 722 (840)
Q Consensus 665 ~~~aI~~l~~aGi~v~m~--TGD-~~~ta~~iA~~~Gi~~~-~~~~~~------------------g~~~~~~~~~~~~~ 722 (840)
++...+.|++.|+.+... ..+ ..+...+.-++++-+.. +++.+. .++.+-+++..+..
T Consensus 44 v~~k~k~~~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvqlPLp~~i~~~~v~~~I~p~KDVDGl~~~n~g~ 123 (279)
T PRK14178 44 VRMKHRACERVGIGSVGIELPGDATTRTVLERIRRLNEDPDINGILVQLPLPKGVDTERVIAAILPEKDVDGFHPLNLGR 123 (279)
T ss_pred HHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCeEEEcCCCCCCCCHHHHHhccCcccCcccCChhhHHH
Confidence 366788899999987664 333 22233334444432221 122221 12222233333333
Q ss_pred hcCCceEEEecCcccHHHHHHHHHHh-CCCEEEEEcCC-ccCHH---Hhhh--CCccEEecCCCcHH--HHhhcCEEecc
Q 003189 723 LIPKIQVMARSSPMDKHTLVKHLRTT-LGEVVAVTGDG-TNDAP---ALHE--ADIGLAMGIAGTEV--AKESADVIILD 793 (840)
Q Consensus 723 ~~~~~~v~ar~~P~~K~~~V~~l~~~-~g~~v~~~GDG-~ND~~---al~~--Advgiamg~~g~~~--ak~~aDivlld 793 (840)
++..-.-|.-|||.-=.++++...-. .|..|.++|-+ .-=-| +|.. |.|-++-. ...+. .-..||+++.-
T Consensus 124 l~~~~~~~~PcTp~av~~ll~~~~i~l~Gk~V~ViGrs~~vGrpla~lL~~~~atVtv~hs-~t~~L~~~~~~ADIvI~A 202 (279)
T PRK14178 124 LVSGLPGFAPCTPNGIMTLLHEYKISIAGKRAVVVGRSIDVGRPMAALLLNADATVTICHS-KTENLKAELRQADILVSA 202 (279)
T ss_pred HhCCCCCCCCCCHHHHHHHHHHcCCCCCCCEEEEECCCccccHHHHHHHHhCCCeeEEEec-ChhHHHHHHhhCCEEEEC
Confidence 33222234455665555555544211 27899999998 44455 5544 44444443 22222 23568888753
No 246
>PRK14177 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=24.11 E-value=7.1e+02 Score=26.72 Aligned_cols=73 Identities=21% Similarity=0.281 Sum_probs=40.9
Q ss_pred CCHHHHHHHHHHHHHHHHcccceeEEEEEEcCCCCCCCCCCCCCceeeeeeecccCCCCcc--hHHHHHHHHhCCCEEEE
Q 003189 604 LNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRPG--VKESVAICRSAGITVRM 681 (840)
Q Consensus 604 l~~~~~~~~~~~~~~~~~~glr~l~~A~~~~~~~~~~~~~~~~~~~~~lg~~~~~D~lR~~--~~~aI~~l~~aGi~v~m 681 (840)
+.++.++++.+.++++..+|.+.-.+| ++-..|.+-.. ++.-++.|++.|+.+.+
T Consensus 11 ia~~i~~~lk~~i~~l~~~~~~~P~La-----------------------ii~vg~d~as~~Yv~~k~k~~~~~Gi~~~~ 67 (284)
T PRK14177 11 LSEKIRNEIRETIEERKTKNKRIPKLA-----------------------TILVGNNPASETYVSMKVKACHKVGMGSEM 67 (284)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCCeEE-----------------------EEEeCCChhHHHHHHHHHHHHHHcCCEEEE
Confidence 446667778888888876654322333 22223322222 35668899999998777
Q ss_pred Ec--CC-CHHHHHHHHHHcCC
Q 003189 682 VT--GD-NINTAKAIARECGI 699 (840)
Q Consensus 682 ~T--GD-~~~ta~~iA~~~Gi 699 (840)
.- .+ ..+...+.=++++-
T Consensus 68 ~~l~~~~s~~el~~~I~~lN~ 88 (284)
T PRK14177 68 IRLKEQTTTEELLGVIDKLNL 88 (284)
T ss_pred EECCCCCCHHHHHHHHHHHhC
Confidence 53 33 33344444445543
No 247
>PRK14172 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=23.96 E-value=5.8e+02 Score=27.26 Aligned_cols=167 Identities=14% Similarity=0.149 Sum_probs=78.4
Q ss_pred CCHHHHHHHHHHHHHHHHcccceeEEEEEEcCCCCCCCCCCCCCceeeeeeecccCCCCc--chHHHHHHHHhCCCEEEE
Q 003189 604 LNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRP--GVKESVAICRSAGITVRM 681 (840)
Q Consensus 604 l~~~~~~~~~~~~~~~~~~glr~l~~A~~~~~~~~~~~~~~~~~~~~~lg~~~~~D~lR~--~~~~aI~~l~~aGi~v~m 681 (840)
+.++.++++.+.++.+..+|.+.-.+| ++-.-|.+-. -++.-.+.|++.|+.+..
T Consensus 10 iA~~i~~~lk~~i~~l~~~g~~~P~La-----------------------ii~vg~d~as~~Yv~~k~k~a~~~Gi~~~~ 66 (278)
T PRK14172 10 VALKIKEEIKNFVEERKENGLSIPKIA-----------------------SILVGNDGGSIYYMNNQEKVANSLGIDFKK 66 (278)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCceEE-----------------------EEEeCCCHHHHHHHHHHHHHHHHcCCEEEE
Confidence 445666777778888776664322222 2222333222 235567889999998766
Q ss_pred Ec--CCC-HHHHHHHHHHcCCccC-CCccccC------------------hhhhcCCHHHHhhhcCCceEEEecCcccHH
Q 003189 682 VT--GDN-INTAKAIARECGILTD-NGIAIEG------------------PEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (840)
Q Consensus 682 ~T--GD~-~~ta~~iA~~~Gi~~~-~~~~~~g------------------~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~ 739 (840)
.- .|. .+...+.=++++=+.. +++.+.- ++.+-+++..+..++..-..|.-|+|.-=.
T Consensus 67 ~~l~~~~~~~el~~~I~~lN~d~~V~GIlvqlPLP~~~~~~~i~~~I~p~KDVDGl~~~n~g~l~~g~~~~~PcTp~av~ 146 (278)
T PRK14172 67 IKLDESISEEDLINEIEELNKDNNVHGIMLQLPLPKHLDEKKITNKIDANKDIDCLTFISVGKFYKGEKCFLPCTPNSVI 146 (278)
T ss_pred EECCCCCCHHHHHHHHHHHhCCCCCCeEEEcCCCCCCCCHHHHHhccCcccccCccCHhhHHHHhCCCCCCcCCCHHHHH
Confidence 53 222 2223333344432211 1222211 111222222232222222234455665555
Q ss_pred HHHHHHHHh-CCCEEEEEcCCccC----HHHhhhCCccEEecCCCc-HH--HHhhcCEEecc
Q 003189 740 TLVKHLRTT-LGEVVAVTGDGTND----APALHEADIGLAMGIAGT-EV--AKESADVIILD 793 (840)
Q Consensus 740 ~~V~~l~~~-~g~~v~~~GDG~ND----~~al~~Advgiamg~~g~-~~--ak~~aDivlld 793 (840)
++++.+.-. .|..|+++|-+..= +-+|...+.-+.+-.+-| +. .-..|||++.-
T Consensus 147 ~lL~~~~i~l~Gk~vvViGrS~~VGkPla~lL~~~~AtVt~chs~T~~l~~~~~~ADIvIsA 208 (278)
T PRK14172 147 TLIKSLNIDIEGKEVVVIGRSNIVGKPVAQLLLNENATVTICHSKTKNLKEVCKKADILVVA 208 (278)
T ss_pred HHHHHhCCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCCCCHHHHHhhCCEEEEc
Confidence 555544321 27889999887552 335544444443322222 22 23458888743
No 248
>PRK00652 lpxK tetraacyldisaccharide 4'-kinase; Reviewed
Probab=23.44 E-value=1.8e+02 Score=31.89 Aligned_cols=58 Identities=28% Similarity=0.394 Sum_probs=36.7
Q ss_pred HHHHHHHHhCCCEEEEEcCCc--------------------cCHHHhhhC--CccEEecCC---CcHHHHh--hcCEEec
Q 003189 740 TLVKHLRTTLGEVVAVTGDGT--------------------NDAPALHEA--DIGLAMGIA---GTEVAKE--SADVIIL 792 (840)
Q Consensus 740 ~~V~~l~~~~g~~v~~~GDG~--------------------ND~~al~~A--dvgiamg~~---g~~~ak~--~aDivll 792 (840)
.+++.|+++ |..|+++.=|. .|-|+|-+- ++.+.+|.. +...+.+ .+|+||+
T Consensus 70 ~L~~~l~~~-g~~~~ilsRGYg~~~~~~~~~v~~~~~~~~~GDEp~lla~~~~~~V~V~~dR~~~~~~~~~~~~~dviil 148 (325)
T PRK00652 70 ALAEQLQAR-GLKPGVVSRGYGGKLEKGPLLVDPDHTAAEVGDEPLLIARRTGAPVAVSPDRVAAARALLAAHGADIIIL 148 (325)
T ss_pred HHHHHHHHC-CCeEEEECCCCCCCcCCCCEEeCCCCChhhhCcHHHHhccCCCceEEEcCcHHHHHHHHHhcCCCCEEEE
Confidence 455667777 88888883222 377766433 677777632 1222332 5899999
Q ss_pred cCCchH
Q 003189 793 DDNFST 798 (840)
Q Consensus 793 dd~f~~ 798 (840)
||.|..
T Consensus 149 DDGfQh 154 (325)
T PRK00652 149 DDGLQH 154 (325)
T ss_pred cCCccC
Confidence 998864
No 249
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=23.20 E-value=52 Score=34.25 Aligned_cols=93 Identities=13% Similarity=0.055 Sum_probs=48.5
Q ss_pred CcchHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCcccHHHH
Q 003189 662 RPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTL 741 (840)
Q Consensus 662 R~~~~~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~~ 741 (840)
-++..++++.|++.|++. ++|......+.......|.. .-+. .+...-.+ ....-.|.. .+
T Consensus 140 ~~~~~~~l~~l~~~g~~~-i~tN~d~~~~~~~~~~~~~g---------~~~~-----~i~~~g~~--~~~~gKP~~--~~ 200 (242)
T TIGR01459 140 LDEFDELFAPIVARKIPN-ICANPDRGINQHGIYRYGAG---------YYAE-----LIKQLGGK--VIYSGKPYP--AI 200 (242)
T ss_pred HHHHHHHHHHHHhCCCcE-EEECCCEeccCCCceEeccc---------HHHH-----HHHHhCCc--EecCCCCCH--HH
Confidence 478899999999899997 77776544333221111110 0000 00000011 111122322 22
Q ss_pred HHHHHHhCC----CEEEEEcCC-ccCHHHhhhCCccE
Q 003189 742 VKHLRTTLG----EVVAVTGDG-TNDAPALHEADIGL 773 (840)
Q Consensus 742 V~~l~~~~g----~~v~~~GDG-~ND~~al~~Advgi 773 (840)
.+...+++| +.+.|+||. .+|..+-+.|++-.
T Consensus 201 ~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~~G~~~ 237 (242)
T TIGR01459 201 FHKALKECSNIPKNRMLMVGDSFYTDILGANRLGIDT 237 (242)
T ss_pred HHHHHHHcCCCCcccEEEECCCcHHHHHHHHHCCCeE
Confidence 222222223 469999999 59999999888743
No 250
>PRK14190 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=22.77 E-value=6.3e+02 Score=27.11 Aligned_cols=55 Identities=15% Similarity=0.242 Sum_probs=32.3
Q ss_pred CCHHHHHHHHHHHHHHHHcccceeEEEEEEcCCCCCCCCCCCCCceeeeeeecccCCCCcc--hHHHHHHHHhCCCEEEE
Q 003189 604 LNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRPG--VKESVAICRSAGITVRM 681 (840)
Q Consensus 604 l~~~~~~~~~~~~~~~~~~glr~l~~A~~~~~~~~~~~~~~~~~~~~~lg~~~~~D~lR~~--~~~aI~~l~~aGi~v~m 681 (840)
+.++.++++.+.++.+..+|.+. .+ +++-.-|.+-.. ++...+.|++.||.+..
T Consensus 11 vA~~i~~~l~~~v~~l~~~g~~P-~L-----------------------aii~vg~d~as~~Yv~~k~k~a~~~Gi~~~~ 66 (284)
T PRK14190 11 VAKEKREQLKEEVVKLKEQGIVP-GL-----------------------AVILVGDDPASHSYVRGKKKAAEKVGIYSEL 66 (284)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCC-eE-----------------------EEEEeCCCHHHHHHHHHHHHHHHHcCCEEEE
Confidence 44566677777777776666543 22 222223322222 35678889999998766
Q ss_pred E
Q 003189 682 V 682 (840)
Q Consensus 682 ~ 682 (840)
.
T Consensus 67 ~ 67 (284)
T PRK14190 67 Y 67 (284)
T ss_pred E
Confidence 4
No 251
>PRK15424 propionate catabolism operon regulatory protein PrpR; Provisional
Probab=22.67 E-value=5.6e+02 Score=30.24 Aligned_cols=77 Identities=19% Similarity=0.206 Sum_probs=54.9
Q ss_pred chHHHHHHHHhCCCEEEEEcCCCHH-HHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCcccHHHHH
Q 003189 664 GVKESVAICRSAGITVRMVTGDNIN-TAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLV 742 (840)
Q Consensus 664 ~~~~aI~~l~~aGi~v~m~TGD~~~-ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~~V 742 (840)
|+..++..+++.+-++.+++=.+.. .+..++.-+|+.- ..+.-.++++=...|
T Consensus 95 Dil~al~~a~~~~~~iavv~~~~~~~~~~~~~~~l~~~i--------------------------~~~~~~~~~e~~~~v 148 (538)
T PRK15424 95 DVMQALARARKLTSSIGVVTYQETIPALVAFQKTFNLRI--------------------------EQRSYVTEEDARGQI 148 (538)
T ss_pred HHHHHHHHHHhcCCcEEEEecCcccHHHHHHHHHhCCce--------------------------EEEEecCHHHHHHHH
Confidence 4667788888877788888776643 5566777777643 377778899999999
Q ss_pred HHHHHhCCCEEEEEcCCccCHHHhhhC
Q 003189 743 KHLRTTLGEVVAVTGDGTNDAPALHEA 769 (840)
Q Consensus 743 ~~l~~~~g~~v~~~GDG~ND~~al~~A 769 (840)
+.+++. |.. +++||++- ..+-+++
T Consensus 149 ~~lk~~-G~~-~vvG~~~~-~~~A~~~ 172 (538)
T PRK15424 149 NELKAN-GIE-AVVGAGLI-TDLAEEA 172 (538)
T ss_pred HHHHHC-CCC-EEEcCchH-HHHHHHh
Confidence 999998 864 45698755 3333443
No 252
>COG3329 Predicted permease [General function prediction only]
Probab=22.59 E-value=4.2e+02 Score=28.55 Aligned_cols=68 Identities=19% Similarity=0.200 Sum_probs=36.6
Q ss_pred ccHHHHHHHHHhcCCCCCCCCCCccHHHHHHHHHhhhHHHHHHHHHHHHHHhhhcccCCCCCcchhHH
Q 003189 138 TSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCALVSLVVGIATEGWPKGAHDGLG 205 (840)
Q Consensus 138 ~~~~~~~~r~~~~G~N~~~~~~~~~f~~~~~~~l~~~~~~il~i~a~is~~~~~~~~~~~~~~~d~~~ 205 (840)
.++.|....|+.|-+-...+...-..|..+-|.|.++.+..++..-++-++.|...+..-+.+|+...
T Consensus 182 g~~~d~~ssr~~~~~~~~~ed~~v~~~ell~Esflnpal~lllggl~iGlitGe~g~~vl~~F~~~lF 249 (372)
T COG3329 182 GDQTDLASSRQEYLSPQWGEDNRVKIWELLQESFLNPALVLLLGGLAIGLITGEQGESVLKPFFDPLF 249 (372)
T ss_pred CchhhhhhhhhhhcccccCcccchhhHHHHHHHHcCchHHHHHHHHHHhheeccCchhhhhhhhHHHH
Confidence 33334554455555544444444567888889999888766654444444333221111245666543
No 253
>PF12304 BCLP: Beta-casein like protein; InterPro: IPR020977 This entry represents eukaryotic proteins that are typically between 216 to 240 amino acids in length which have two conserved sequence motifs: VLR and TRIY. Beta-casein-like protein is associated with cell morphology and a regulation of growth pattern of tumours. It is found in adenocarcinomas of uterine cervical tissues[].
Probab=22.12 E-value=6e+02 Score=25.20 Aligned_cols=90 Identities=18% Similarity=0.289 Sum_probs=43.5
Q ss_pred HHHHHhhcCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhcccCCCccccCCcChHHHHHHHHHHHHHHH
Q 003189 330 GKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVV 409 (840)
Q Consensus 330 g~i~~~~~~~~~~~tplq~~l~~~a~~~~~~~l~~a~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ai~ilv 409 (840)
|...+-+....+..++-....|-++-.-+.+++...++..+ +.++. ......| .+-.+.+.-+++-
T Consensus 23 G~VLRhv~~~~~av~~eY~vsNiisv~Sgll~I~~GI~AIv--lSrnl-----~~~~L~W-------~Ll~~S~ln~LlS 88 (188)
T PF12304_consen 23 GTVLRHVSNPKDAVTLEYAVSNIISVTSGLLSIICGIVAIV--LSRNL-----RNRPLHW-------TLLVVSLLNALLS 88 (188)
T ss_pred hHHHHhhccccccceehhhHHHHHHHHHHHHHHHHhHHHHh--hhccC-----CCCcchH-------HHHHHHHHHHHHH
Confidence 44556666666665655544454444333333333322221 12221 1111112 2333444555667
Q ss_pred HhcCCchHHHHHHHHHHHHHHHhc
Q 003189 410 VAVPEGLPLAVTLSLAFAMKKMMN 433 (840)
Q Consensus 410 va~P~~Lplav~l~l~~~~~~l~~ 433 (840)
.+|-.||.+++.++.+..-++++.
T Consensus 89 aAc~vGL~~ai~~Tv~~~Gr~Ll~ 112 (188)
T PF12304_consen 89 AACAVGLLLAISLTVANQGRNLLA 112 (188)
T ss_pred HHHHHHHHHHHHHHHHhCchhHhh
Confidence 777777777777776666555554
No 254
>PLN02591 tryptophan synthase
Probab=21.89 E-value=4.1e+02 Score=27.88 Aligned_cols=93 Identities=23% Similarity=0.292 Sum_probs=54.2
Q ss_pred CcchHHHHHHHHhCCCE-EEEEcCCC-HHHHHHHHHHc-CCccC-CCccccChhhhcCCHHHHhhhcCCceEEEecCccc
Q 003189 662 RPGVKESVAICRSAGIT-VRMVTGDN-INTAKAIAREC-GILTD-NGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMD 737 (840)
Q Consensus 662 R~~~~~aI~~l~~aGi~-v~m~TGD~-~~ta~~iA~~~-Gi~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~ 737 (840)
=++..+..+.|++.|+. +.++|-.. ....+.+|+.. |..-- ...-++|.. ...|.+
T Consensus 117 ~ee~~~~~~~~~~~gl~~I~lv~Ptt~~~ri~~ia~~~~gFIY~Vs~~GvTG~~--------------------~~~~~~ 176 (250)
T PLN02591 117 LEETEALRAEAAKNGIELVLLTTPTTPTERMKAIAEASEGFVYLVSSTGVTGAR--------------------ASVSGR 176 (250)
T ss_pred HHHHHHHHHHHHHcCCeEEEEeCCCCCHHHHHHHHHhCCCcEEEeeCCCCcCCC--------------------cCCchh
Confidence 37788889999999986 44554555 35677777775 22210 000011110 012555
Q ss_pred HHHHHHHHHHhCCCEEEEEcCCcc---CHHHhhh--CCccEEec
Q 003189 738 KHTLVKHLRTTLGEVVAVTGDGTN---DAPALHE--ADIGLAMG 776 (840)
Q Consensus 738 K~~~V~~l~~~~g~~v~~~GDG~N---D~~al~~--Advgiamg 776 (840)
-...++.+++. ...-.++|=|++ |+..+.. || |+-.|
T Consensus 177 ~~~~i~~vk~~-~~~Pv~vGFGI~~~e~v~~~~~~GAD-GvIVG 218 (250)
T PLN02591 177 VESLLQELKEV-TDKPVAVGFGISKPEHAKQIAGWGAD-GVIVG 218 (250)
T ss_pred HHHHHHHHHhc-CCCceEEeCCCCCHHHHHHHHhcCCC-EEEEC
Confidence 56778888876 566667799999 4444443 33 55445
No 255
>PF00875 DNA_photolyase: DNA photolyase from Prosite.; InterPro: IPR006050 DNA photolyases are enzymes that bind to DNA containing pyrimidine dimers: on absorption of visible light, they catalyse dimer splitting into the constituent monomers, a process called photoreactivation []. This is a DNA repair mechanism, repairing mismatched pyrimidine dimers induced by exposure to ultra-violet light []. The precise mechanisms involved in substrate binding, conversion of light energy to the mechanical energy needed to rupture the cyclobutane ring, and subsequent release of the product are uncertain []. Analysis of DNA lyases has revealed the presence of an intrinsic chromophore, all monomers containing a reduced FAD moiety, and, in addition, either a reduced pterin or 8-hydroxy-5-diazaflavin as a second chromophore [, ]. Either chromophore may act as the primary photon acceptor, peak absorptions occurring in the blue region of the spectrum and in the UV-B region, at a wavelength around 290nm []. This domain binds a light harvesting cofactor.; GO: 0003913 DNA photolyase activity, 0006281 DNA repair; PDB: 3UMV_A 2J07_A 1IQU_A 2J09_A 2J08_A 1IQR_A 1DNP_A 3FY4_B 2VTB_A 2J4D_B ....
Probab=21.82 E-value=2.9e+02 Score=26.55 Aligned_cols=35 Identities=23% Similarity=0.342 Sum_probs=28.9
Q ss_pred HHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCcc
Q 003189 667 ESVAICRSAGITVRMVTGDNINTAKAIARECGILT 701 (840)
Q Consensus 667 ~aI~~l~~aGi~v~m~TGD~~~ta~~iA~~~Gi~~ 701 (840)
+.=++|++.|+...++.||.......+++++|+..
T Consensus 57 ~L~~~L~~~g~~L~v~~g~~~~~l~~l~~~~~~~~ 91 (165)
T PF00875_consen 57 DLQESLRKLGIPLLVLRGDPEEVLPELAKEYGATA 91 (165)
T ss_dssp HHHHHHHHTTS-EEEEESSHHHHHHHHHHHHTESE
T ss_pred HHHHHHHhcCcceEEEecchHHHHHHHHHhcCcCe
Confidence 34456778899999999999999999999999864
No 256
>PF09926 DUF2158: Uncharacterized small protein (DUF2158); InterPro: IPR019226 This entry represents a family of predominantly prokaryotic proteins with no known function.
Probab=21.71 E-value=58 Score=25.29 Aligned_cols=12 Identities=42% Similarity=0.579 Sum_probs=10.2
Q ss_pred CCCcEEEecCCC
Q 003189 257 LPGDIVHLCMGD 268 (840)
Q Consensus 257 vvGDIV~l~~Gd 268 (840)
.+||+|.|+.|-
T Consensus 2 ~~GDvV~LKSGG 13 (53)
T PF09926_consen 2 KIGDVVQLKSGG 13 (53)
T ss_pred CCCCEEEEccCC
Confidence 589999999884
No 257
>PRK14010 potassium-transporting ATPase subunit B; Provisional
Probab=21.47 E-value=1.1e+03 Score=28.78 Aligned_cols=88 Identities=18% Similarity=0.220 Sum_probs=52.3
Q ss_pred CCHHHHHHHHHHHHHHHHcccceeEEEEEEcCCCCCCCCCCCCCceeeeeeecccCCCCcch-HHHHHHHHhCCCEEEEE
Q 003189 604 LNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRPGV-KESVAICRSAGITVRMV 682 (840)
Q Consensus 604 l~~~~~~~~~~~~~~~~~~glr~l~~A~~~~~~~~~~~~~~~~~~~~~lg~~~~~D~lR~~~-~~aI~~l~~aGi~v~m~ 682 (840)
+.+..|....+.++++.+.|.|++.+.- +++ ...... -.-+|+-.+.-.+.|+- .+.|+.+|+.|. ++..
T Consensus 438 l~Dp~R~~a~e~I~~Lr~~GI~vvMiTG----Dn~-~TA~aI---A~elGI~~v~A~~~PedK~~iV~~lQ~~G~-~VaM 508 (673)
T PRK14010 438 LKDVIKDGLVERFRELREMGIETVMCTG----DNE-LTAATI---AKEAGVDRFVAECKPEDKINVIREEQAKGH-IVAM 508 (673)
T ss_pred eecCCcHHHHHHHHHHHHCCCeEEEECC----CCH-HHHHHH---HHHcCCceEEcCCCHHHHHHHHHHHHhCCC-EEEE
Confidence 4445566677888888888998876531 000 000000 01134333445666666 567888888885 5667
Q ss_pred cCCCHHHHHHHHHH-cCCc
Q 003189 683 TGDNINTAKAIARE-CGIL 700 (840)
Q Consensus 683 TGD~~~ta~~iA~~-~Gi~ 700 (840)
|||...-|-++++. +||.
T Consensus 509 tGDGvNDAPALa~ADVGIA 527 (673)
T PRK14010 509 TGDGTNDAPALAEANVGLA 527 (673)
T ss_pred ECCChhhHHHHHhCCEEEE
Confidence 89998888887753 4443
No 258
>COG2503 Predicted secreted acid phosphatase [General function prediction only]
Probab=21.38 E-value=5.3e+02 Score=26.92 Aligned_cols=87 Identities=13% Similarity=0.127 Sum_probs=52.5
Q ss_pred CCCcchHHHHHHHHhCCCEEEEEcCCCHHH----HHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCc
Q 003189 660 PMRPGVKESVAICRSAGITVRMVTGDNINT----AKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSP 735 (840)
Q Consensus 660 ~lR~~~~~aI~~l~~aGi~v~m~TGD~~~t----a~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P 735 (840)
.+=||+.+-++..-+.|.+|..+|-+.... ...=-+..|+..... +. ++---.-
T Consensus 122 k~vpGA~eFl~Yvn~~Gg~ifyiSNR~~~~~~~~T~~nLk~~g~~~~~~---------------------~~-~llkk~~ 179 (274)
T COG2503 122 KAVPGAVEFLNYVNSNGGKIFYISNRDQENEKDGTIENLKSEGLPQVLE---------------------SH-LLLKKDK 179 (274)
T ss_pred ccCccHHHHHHHHHhcCcEEEEEeccchhcccchhHHHHHHcCcccccc---------------------cc-eEEeeCC
Confidence 345899999999999999999999987655 222334556653210 00 1111112
Q ss_pred ccHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhC
Q 003189 736 MDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEA 769 (840)
Q Consensus 736 ~~K~~~V~~l~~~~g~~v~~~GDG~ND~~al~~A 769 (840)
..|...-+..++- -.+|+.+||..+|-......
T Consensus 180 k~Ke~R~~~v~k~-~~iVm~vGDNl~DF~d~~~k 212 (274)
T COG2503 180 KSKEVRRQAVEKD-YKIVMLVGDNLDDFGDNAYK 212 (274)
T ss_pred CcHHHHHHHHhhc-cceeeEecCchhhhcchhhh
Confidence 2333333333333 36888899999987665443
No 259
>TIGR00612 ispG_gcpE 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase. Chlamydial members of the family have a long insert. The family is largely restricted to Bacteria, where it is widely but not universally distributed. No homology can be detected between the GcpE family and other proteins.
Probab=21.37 E-value=2.5e+02 Score=30.65 Aligned_cols=92 Identities=26% Similarity=0.350 Sum_probs=58.5
Q ss_pred HHHHHHHHhCCC--EEE-EEcCCCHH---HHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCcccHH
Q 003189 666 KESVAICRSAGI--TVR-MVTGDNIN---TAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (840)
Q Consensus 666 ~~aI~~l~~aGi--~v~-m~TGD~~~---ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~ 739 (840)
.-.|-.|-..|| .++ =+|+|+.+ .+..|-+.+|+-.....++.-+ -++|+. -|-.
T Consensus 213 aigig~LL~~GIGDTIRVSLT~dP~~EV~va~~IL~slglr~~g~~iiSCP------------------tCGR~~-~dl~ 273 (346)
T TIGR00612 213 SAGIGILLARGIGDTIRVSLTDDPTHEVPVAFEILQSLGLRARGVEIVACP------------------SCGRTG-FDVE 273 (346)
T ss_pred HHHHHHHHhhCCCCeEEEECCCCcHHHHHHHHHHHHHcCCCcCCCeEEECC------------------CCCCcC-CCHH
Confidence 345677777777 333 37888854 5677888899865432222221 122332 3333
Q ss_pred HHHHHHHHh-----CCCEEEEEcCCccCHHHhhhCCccEEec
Q 003189 740 TLVKHLRTT-----LGEVVAVTGDGTNDAPALHEADIGLAMG 776 (840)
Q Consensus 740 ~~V~~l~~~-----~g~~v~~~GDG~ND~~al~~Advgiamg 776 (840)
.+++.+.++ ..-.||+.|==+|-..--+.||+|||-|
T Consensus 274 ~~~~~ve~~l~~~~~~l~VAVMGCvVNGPGEak~ADiGIagg 315 (346)
T TIGR00612 274 KVVRRVQEALFHLKTPLKVAVMGCVVNGPGEAKHADIGISGG 315 (346)
T ss_pred HHHHHHHHHHhcCCCCCEEEEECceecCCchhhccCeeeecC
Confidence 444443332 1358999999999999999999999976
No 260
>COG1832 Predicted CoA-binding protein [General function prediction only]
Probab=21.36 E-value=1.5e+02 Score=28.03 Aligned_cols=36 Identities=19% Similarity=0.140 Sum_probs=31.8
Q ss_pred eeeeeeecccCCCCcchHHHHHHHHhCCCEEEEEcC
Q 003189 649 YTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTG 684 (840)
Q Consensus 649 ~~~lg~~~~~D~lR~~~~~aI~~l~~aGi~v~m~TG 684 (840)
..-++++|+.|.+...+-..-+.|+++|++|+-+--
T Consensus 16 ~K~IAvVG~S~~P~r~sy~V~kyL~~~GY~ViPVNP 51 (140)
T COG1832 16 AKTIAVVGASDKPDRPSYRVAKYLQQKGYRVIPVNP 51 (140)
T ss_pred CceEEEEecCCCCCccHHHHHHHHHHCCCEEEeeCc
Confidence 344789999999999999999999999999998843
No 261
>smart00306 HintN Hint (Hedgehog/Intein) domain N-terminal region. Hedgehog/Intein domain, N-terminal region. Domain has been split to accommodate large insertions of endonucleases.
Probab=21.13 E-value=1.2e+02 Score=26.19 Aligned_cols=28 Identities=25% Similarity=0.190 Sum_probs=21.5
Q ss_pred ceEEEEECCeEEEEeccCCCCCcEEEec
Q 003189 238 ITVQVARNGFRRKISIYDLLPGDIVHLC 265 (840)
Q Consensus 238 ~~v~V~RdG~~~~I~~~dLvvGDIV~l~ 265 (840)
..+.+.++|..+.+.+.+|.+||.|.+.
T Consensus 72 H~~~~~~~~~~~w~~a~~l~~gd~v~~~ 99 (100)
T smart00306 72 HLLLVRDGGKLVWVFASELKPGDYVLVP 99 (100)
T ss_pred CEEEEecCCcEEEEEHHHCCCCCEEEec
Confidence 3455566777778999999999999864
No 262
>PF05240 APOBEC_C: APOBEC-like C-terminal domain; InterPro: IPR007904 This domain is found at the C terminus of the Apolipoprotein B mRNA editing enzyme. Apobec-1 catalyzes C to U editing of apolipoprotein B (apoB) mRNA in the mammalian intestine. C to U RNA editing of mammalian apolipoprotein B (apoB) RNA is a site-specific posttranscriptional modification in which a single cytidine is enzymatically deaminated to uridine, thereby generating a UAA stop codon in the edited mRNA. The function of this domain is currently unknown.; GO: 0008270 zinc ion binding, 0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines; PDB: 2NYT_D.
Probab=20.84 E-value=97 Score=24.29 Aligned_cols=24 Identities=25% Similarity=0.318 Sum_probs=17.9
Q ss_pred cchHHHHHHHHhCCCEEEEEcCCC
Q 003189 663 PGVKESVAICRSAGITVRMVTGDN 686 (840)
Q Consensus 663 ~~~~~aI~~l~~aGi~v~m~TGD~ 686 (840)
|+-+++++.|.++|++|.|.|-+.
T Consensus 2 ~~~qegLr~L~~aG~~v~iM~~~e 25 (55)
T PF05240_consen 2 PDYQEGLRRLCQAGAQVSIMTYSE 25 (55)
T ss_dssp HHHHHHHHHHHHTT-EEEE--HHH
T ss_pred cHHHHHHHHHHHCCCeEEecCcHH
Confidence 567899999999999999988644
No 263
>TIGR02329 propionate_PrpR propionate catabolism operon regulatory protein PrpR. At least five distinct pathways exists for the catabolism of propionate by way of propionyl-CoA. Members of this family represent the transcriptional regulatory protein PrpR, whose gene is found in most cases divergently transcribed from an operon for the methylcitric acid cycle of propionate catabolism. 2-methylcitric acid, a catabolite by this pathway, is a coactivator of PrpR.
Probab=20.77 E-value=7.3e+02 Score=29.23 Aligned_cols=105 Identities=16% Similarity=0.157 Sum_probs=70.3
Q ss_pred chHHHHHHHHhCCCEEEEEcCCCH-HHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceEEEecCcccHHHHH
Q 003189 664 GVKESVAICRSAGITVRMVTGDNI-NTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLV 742 (840)
Q Consensus 664 ~~~~aI~~l~~aGi~v~m~TGD~~-~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~~V 742 (840)
|+..++..+++.+-++.+++=.+. ..+..++.-+++.- ..+.-.++++=...|
T Consensus 85 Dil~al~~a~~~~~~ia~vg~~~~~~~~~~~~~ll~~~i--------------------------~~~~~~~~~e~~~~~ 138 (526)
T TIGR02329 85 DVMQALARARRIASSIGVVTHQDTPPALRRFQAAFNLDI--------------------------VQRSYVTEEDARSCV 138 (526)
T ss_pred hHHHHHHHHHhcCCcEEEEecCcccHHHHHHHHHhCCce--------------------------EEEEecCHHHHHHHH
Confidence 466778888887778777776664 45666777777653 377888899999999
Q ss_pred HHHHHhCCCEEEEEcCCccCHHHhhhCCccEEecCCCcHHHHhhcCEEeccCCchHHHHHHHHHHHHHHHHH
Q 003189 743 KHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQ 814 (840)
Q Consensus 743 ~~l~~~~g~~v~~~GDG~ND~~al~~Advgiamg~~g~~~ak~~aDivlldd~f~~i~~~i~~gR~~~~~i~ 814 (840)
+.+++. |.. +++||++- ..+-+++++ .-|+..+. .+|..++..+..++.-.+
T Consensus 139 ~~l~~~-G~~-~viG~~~~-~~~A~~~gl----------------~~ili~s~-esi~~a~~~A~~~~~~~~ 190 (526)
T TIGR02329 139 NDLRAR-GIG-AVVGAGLI-TDLAEQAGL----------------HGVFLYSA-DSVRQAFDDALDVARATR 190 (526)
T ss_pred HHHHHC-CCC-EEECChHH-HHHHHHcCC----------------ceEEEecH-HHHHHHHHHHHHHHHHHH
Confidence 999998 864 45688843 222233332 23333333 777778887777655443
No 264
>PF13275 S4_2: S4 domain; PDB: 1P9K_A.
Probab=20.69 E-value=53 Score=26.67 Aligned_cols=23 Identities=35% Similarity=0.403 Sum_probs=12.7
Q ss_pred EEECCeEEEEeccCCCCCcEEEe
Q 003189 242 VARNGFRRKISIYDLLPGDIVHL 264 (840)
Q Consensus 242 V~RdG~~~~I~~~dLvvGDIV~l 264 (840)
|.-||+...-.-..|.+||+|.+
T Consensus 35 V~VNGe~e~rrg~Kl~~GD~V~~ 57 (65)
T PF13275_consen 35 VKVNGEVETRRGKKLRPGDVVEI 57 (65)
T ss_dssp HEETTB----SS----SSEEEEE
T ss_pred eEECCEEccccCCcCCCCCEEEE
Confidence 45588888888899999999998
No 265
>PRK13125 trpA tryptophan synthase subunit alpha; Provisional
Probab=20.64 E-value=5.4e+02 Score=26.77 Aligned_cols=96 Identities=19% Similarity=0.259 Sum_probs=0.0
Q ss_pred ecccCCC---CcchHHHHHHHHhCCCEEEEEcCC--CHHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCceE
Q 003189 655 VGIKDPM---RPGVKESVAICRSAGITVRMVTGD--NINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQV 729 (840)
Q Consensus 655 ~~~~D~l---R~~~~~aI~~l~~aGi~v~m~TGD--~~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v 729 (840)
+.+.|-+ -++..+.++.+++.|+++.++-.- +.+....+++...-. +
T Consensus 105 vii~dlp~e~~~~~~~~~~~~~~~Gl~~~~~v~p~T~~e~l~~~~~~~~~~----------------------------l 156 (244)
T PRK13125 105 VLFPDLLIDYPDDLEKYVEIIKNKGLKPVFFTSPKFPDLLIHRLSKLSPLF----------------------------I 156 (244)
T ss_pred EEECCCCCCcHHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHhCCCE----------------------------E
Q ss_pred EEecCcc-------cHHHHHHHHHHhCCCEEEEEcCCc---cCHHHhhhCCc-cEEecCCC
Q 003189 730 MARSSPM-------DKHTLVKHLRTTLGEVVAVTGDGT---NDAPALHEADI-GLAMGIAG 779 (840)
Q Consensus 730 ~ar~~P~-------~K~~~V~~l~~~~g~~v~~~GDG~---ND~~al~~Adv-giamg~~g 779 (840)
+.-..|. +-...++.+++.......++|=|+ +|+..+..++. |+-+| ++
T Consensus 157 ~msv~~~~g~~~~~~~~~~i~~lr~~~~~~~i~v~gGI~~~e~i~~~~~~gaD~vvvG-Sa 216 (244)
T PRK13125 157 YYGLRPATGVPLPVSVERNIKRVRNLVGNKYLVVGFGLDSPEDARDALSAGADGVVVG-TA 216 (244)
T ss_pred EEEeCCCCCCCchHHHHHHHHHHHHhcCCCCEEEeCCcCCHHHHHHHHHcCCCEEEEC-HH
No 266
>TIGR00640 acid_CoA_mut_C methylmalonyl-CoA mutase C-terminal domain. Methylmalonyl-CoA mutase (EC 5.4.99.2) catalyzes a reversible isomerization between L-methylmalonyl-CoA and succinyl-CoA. The enzyme uses an adenosylcobalamin cofactor. It may be a homodimer, as in mitochondrion, or a heterodimer with partially homologous beta chain that does not bind the adenosylcobalamin cofactor, as in Propionibacterium freudenreichii. The most similar archaeal sequences are separate chains, such as AF2215 and AF2219 of Archaeoglobus fulgidus, that correspond roughly to the first 500 and last 130 residues, respectively of known methylmalonyl-CoA mutases. This model describes the C-terminal domain subfamily. In a neighbor-joining tree (methylaspartate mutase S chain as the outgroup), AF2219 branches with a coenzyme B12-dependent enzyme known not to be 5.4.99.2.
Probab=20.62 E-value=7e+02 Score=23.27 Aligned_cols=104 Identities=19% Similarity=0.194 Sum_probs=65.7
Q ss_pred eeeeeecccCCCCcchHHHHHHHHhCCCEEEEEcCCC-HHHHHHHHHHcCCccCCCccccChhhhcCCHHHHhhhcCCce
Q 003189 650 TCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDN-INTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQ 728 (840)
Q Consensus 650 ~~lg~~~~~D~lR~~~~~aI~~l~~aGi~v~m~TGD~-~~ta~~iA~~~Gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 728 (840)
.++|.++. |---.+..-+-..|+.+|++|+-+-+|. ++.....|.+-+-. +.
T Consensus 5 v~~a~~g~-D~Hd~g~~iv~~~l~~~GfeVi~lg~~~s~e~~v~aa~e~~ad--------------------------ii 57 (132)
T TIGR00640 5 ILVAKMGQ-DGHDRGAKVIATAYADLGFDVDVGPLFQTPEEIARQAVEADVH--------------------------VV 57 (132)
T ss_pred EEEEeeCC-CccHHHHHHHHHHHHhCCcEEEECCCCCCHHHHHHHHHHcCCC--------------------------EE
Confidence 35666666 6666677777788899999999999985 44555555554432 11
Q ss_pred EEEecC---cccHHHHHHHHHHhCC--CEEEEEc--CCccCHHHhhhCCccEEecCCCcHH
Q 003189 729 VMARSS---PMDKHTLVKHLRTTLG--EVVAVTG--DGTNDAPALHEADIGLAMGIAGTEV 782 (840)
Q Consensus 729 v~ar~~---P~~K~~~V~~l~~~~g--~~v~~~G--DG~ND~~al~~Advgiamg~~g~~~ 782 (840)
+++.+. ++.=..+++.|+++ | .+..++| =...|...|++++|-=..+ .|++.
T Consensus 58 ~iSsl~~~~~~~~~~~~~~L~~~-g~~~i~vivGG~~~~~~~~~l~~~Gvd~~~~-~gt~~ 116 (132)
T TIGR00640 58 GVSSLAGGHLTLVPALRKELDKL-GRPDILVVVGGVIPPQDFDELKEMGVAEIFG-PGTPI 116 (132)
T ss_pred EEcCchhhhHHHHHHHHHHHHhc-CCCCCEEEEeCCCChHhHHHHHHCCCCEEEC-CCCCH
Confidence 333222 23345677788876 5 4566676 3444788899988865455 44443
No 267
>PF03129 HGTP_anticodon: Anticodon binding domain; InterPro: IPR004154 tRNA synthetases, or tRNA ligases are involved in protein synthesis. This domain is found in histidyl, glycyl, threonyl and prolyl tRNA synthetases [] it is probably the anticodon binding domain [].; GO: 0004812 aminoacyl-tRNA ligase activity, 0005524 ATP binding; PDB: 1KOG_B 1EVL_D 1EVK_B 1QF6_A 1FYF_B 2I4O_A 2I4M_A 2I4N_A 2I4L_A 1HC7_D ....
Probab=20.41 E-value=1.6e+02 Score=25.24 Aligned_cols=48 Identities=21% Similarity=0.234 Sum_probs=38.5
Q ss_pred eeecccC---CCCcchHHHHHHHHhCCCEEEEE-cCCCHHHHHHHHHHcCCc
Q 003189 653 GIVGIKD---PMRPGVKESVAICRSAGITVRMV-TGDNINTAKAIARECGIL 700 (840)
Q Consensus 653 g~~~~~D---~lR~~~~~aI~~l~~aGi~v~m~-TGD~~~ta~~iA~~~Gi~ 700 (840)
.++.+.+ ...+-+.+..+.|+++|+++.+- ++++......-|...|+.
T Consensus 3 ~Ii~~~~~~~~~~~~a~~l~~~L~~~gi~v~~d~~~~~~~k~~~~a~~~g~p 54 (94)
T PF03129_consen 3 VIIPVGKKDEEIIEYAQELANKLRKAGIRVELDDSDKSLGKQIKYADKLGIP 54 (94)
T ss_dssp EEEESSCSHHHHHHHHHHHHHHHHHTTSEEEEESSSSTHHHHHHHHHHTTES
T ss_pred EEEEeCCCcHHHHHHHHHHHHHHHHCCCEEEEECCCCchhHHHHHHhhcCCe
Confidence 4555666 66777889999999999998888 666777888888989985
No 268
>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=20.31 E-value=8.6e+02 Score=26.11 Aligned_cols=165 Identities=15% Similarity=0.265 Sum_probs=79.8
Q ss_pred CCHHHHHHHHHHHHHHHHc-ccceeEEEEEEcCCCCCCCCCCCCCceeeeeeecccCCCCcc--hHHHHHHHHhCCCEEE
Q 003189 604 LNEAAVNHLNETIEKFASE-ALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRPG--VKESVAICRSAGITVR 680 (840)
Q Consensus 604 l~~~~~~~~~~~~~~~~~~-glr~l~~A~~~~~~~~~~~~~~~~~~~~~lg~~~~~D~lR~~--~~~aI~~l~~aGi~v~ 680 (840)
+.++.++++.+.++.+.++ |.+. .+| ++-.-|..-.. ++...+.|++.||.+.
T Consensus 9 ~A~~i~~~l~~~v~~l~~~~g~~P-~La-----------------------iI~vg~d~as~~Yv~~k~k~a~~~Gi~~~ 64 (285)
T PRK14191 9 LSYKIEKDLKNKIQILTAQTGKRP-KLA-----------------------VILVGKDPASQTYVNMKIKACERVGMDSD 64 (285)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCC-eEE-----------------------EEEeCCCHHHHHHHHHHHHHHHHcCCEEE
Confidence 3455666777777777544 5433 232 33333333222 3667888999999765
Q ss_pred EE--cCCC-HHHHHHHHHHcCCccC-CCcccc------------------ChhhhcCCHHHHhhhcCCceEEEecCcccH
Q 003189 681 MV--TGDN-INTAKAIARECGILTD-NGIAIE------------------GPEFREKSDEELSKLIPKIQVMARSSPMDK 738 (840)
Q Consensus 681 m~--TGD~-~~ta~~iA~~~Gi~~~-~~~~~~------------------g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K 738 (840)
.. ..+. .....+.-++++=+.. +++.+. .++.+-+++..+..++..-.-|.-|||.-=
T Consensus 65 ~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvq~PlP~~i~~~~i~~~I~p~KDVDGl~~~n~g~l~~g~~~~~PcTp~av 144 (285)
T PRK14191 65 LHTLQENTTEAELLSLIKDLNTDQNIDGILVQLPLPRHIDTKMVLEAIDPNKDVDGFHPLNIGKLCSQLDGFVPATPMGV 144 (285)
T ss_pred EEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhcCCccccccccChhhHHHHhcCCCCCCCCcHHHH
Confidence 54 3332 2334444444432221 122221 112222333333333322223445666655
Q ss_pred HHHHHHHHHh-CCCEEEEEcCCcc-C---HHHh--hhCCccEEecCCCcHH--HHhhcCEEecc
Q 003189 739 HTLVKHLRTT-LGEVVAVTGDGTN-D---APAL--HEADIGLAMGIAGTEV--AKESADVIILD 793 (840)
Q Consensus 739 ~~~V~~l~~~-~g~~v~~~GDG~N-D---~~al--~~Advgiamg~~g~~~--ak~~aDivlld 793 (840)
.++++..+-. .|..|.++|.|.. - +-+| +.|.|-++-. ...+. .-..|||++.-
T Consensus 145 i~lL~~~~i~l~Gk~vvVvGrs~~VG~Pla~lL~~~gAtVtv~hs-~t~~l~~~~~~ADIvV~A 207 (285)
T PRK14191 145 MRLLKHYHIEIKGKDVVIIGASNIVGKPLAMLMLNAGASVSVCHI-LTKDLSFYTQNADIVCVG 207 (285)
T ss_pred HHHHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHCCCEEEEEeC-CcHHHHHHHHhCCEEEEe
Confidence 5555544321 2789999999822 2 2234 3355555533 22222 33568888743
No 269
>cd00859 HisRS_anticodon HisRS Histidyl-anticodon binding domain. HisRS belongs to class II aminoacyl-tRNA synthetases (aaRS). This alignment contains the anticodon binding domain, which is responsible for specificity in tRNA-binding, so that the activated amino acid is transferred to a ribose 3' OH group of the appropriate tRNA only.
Probab=20.21 E-value=1.6e+02 Score=24.43 Aligned_cols=47 Identities=19% Similarity=0.211 Sum_probs=36.4
Q ss_pred eecccCCCCcchHHHHHHHHhCCCEEEEEc-CCCHHHHHHHHHHcCCc
Q 003189 654 IVGIKDPMRPGVKESVAICRSAGITVRMVT-GDNINTAKAIARECGIL 700 (840)
Q Consensus 654 ~~~~~D~lR~~~~~aI~~l~~aGi~v~m~T-GD~~~ta~~iA~~~Gi~ 700 (840)
++.+.++.++.+.+..+.|+++|++|.+.. +.+.......|...|+.
T Consensus 6 i~~~~~~~~~~a~~i~~~Lr~~g~~v~~~~~~~~~~~~~~~a~~~~~~ 53 (91)
T cd00859 6 VVPLGEGALSEALELAEQLRDAGIKAEIDYGGRKLKKQFKYADRSGAR 53 (91)
T ss_pred EEEcChHHHHHHHHHHHHHHHCCCEEEEecCCCCHHHHHHHHHHcCCC
Confidence 344566777888899999999999998854 44777788888888873
No 270
>PRK14193 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=20.15 E-value=7.1e+02 Score=26.71 Aligned_cols=55 Identities=18% Similarity=0.189 Sum_probs=33.6
Q ss_pred CCHHHHHHHHHHHHHHHHcccceeEEEEEEcCCCCCCCCCCCCCceeeeeeecccCCCCc--chHHHHHHHHhCCCEEEE
Q 003189 604 LNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRP--GVKESVAICRSAGITVRM 681 (840)
Q Consensus 604 l~~~~~~~~~~~~~~~~~~glr~l~~A~~~~~~~~~~~~~~~~~~~~~lg~~~~~D~lR~--~~~~aI~~l~~aGi~v~m 681 (840)
+.++.++++.+.++.+.++|.+. .+| ++..-|..-. -++.-.+.|++.|+.+..
T Consensus 11 va~~i~~~l~~~v~~l~~~g~~P-~La-----------------------iI~vg~d~as~~Yv~~k~k~a~~~Gi~~~~ 66 (284)
T PRK14193 11 TADEIKADLAERVAALKEKGITP-GLG-----------------------TVLVGDDPGSQAYVRGKHRDCAEVGITSIR 66 (284)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCc-eEE-----------------------EEEeCCCHHHHHHHHHHHHHHHHcCCEEEE
Confidence 44566677777888887777554 333 2222232222 246778899999998655
Q ss_pred E
Q 003189 682 V 682 (840)
Q Consensus 682 ~ 682 (840)
+
T Consensus 67 ~ 67 (284)
T PRK14193 67 R 67 (284)
T ss_pred E
Confidence 4
No 271
>PRK14171 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=20.06 E-value=8.1e+02 Score=26.33 Aligned_cols=56 Identities=25% Similarity=0.280 Sum_probs=34.0
Q ss_pred CCHHHHHHHHHHHHHHHHc-ccceeEEEEEEcCCCCCCCCCCCCCceeeeeeecccCCCCcc--hHHHHHHHHhCCCEEE
Q 003189 604 LNEAAVNHLNETIEKFASE-ALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRPG--VKESVAICRSAGITVR 680 (840)
Q Consensus 604 l~~~~~~~~~~~~~~~~~~-glr~l~~A~~~~~~~~~~~~~~~~~~~~~lg~~~~~D~lR~~--~~~aI~~l~~aGi~v~ 680 (840)
+.++.++++.+.++++.++ |.+. .+| ++-..|.+-.. ++.-++.|++.|+.+.
T Consensus 10 iA~~i~~~lk~~v~~l~~~~g~~P-~La-----------------------iI~vg~d~as~~Yv~~k~k~a~~~Gi~~~ 65 (288)
T PRK14171 10 LANEILADLKLEIQELKSQTNASP-KLA-----------------------IVLVGDNPASIIYVKNKIKNAHKIGIDTL 65 (288)
T ss_pred HHHHHHHHHHHHHHHHHhccCCCC-eEE-----------------------EEEeCCCccHHHHHHHHHHHHHHcCCEEE
Confidence 4456667788888888666 5443 222 22233333322 3567889999999876
Q ss_pred EEc
Q 003189 681 MVT 683 (840)
Q Consensus 681 m~T 683 (840)
.+-
T Consensus 66 ~~~ 68 (288)
T PRK14171 66 LVN 68 (288)
T ss_pred EEE
Confidence 654
Done!