Query 003194
Match_columns 840
No_of_seqs 507 out of 2801
Neff 7.4
Searched_HMMs 29240
Date Mon Mar 25 16:42:36 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/003194.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/003194hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4hpp_A Probable glutamine synt 100.0 2E-106 5E-111 912.5 41.1 422 405-840 4-443 (443)
2 3qaj_A Glutamine synthetase; A 100.0 9E-107 3E-111 916.0 37.7 413 403-835 13-437 (444)
3 3ng0_A Glutamine synthetase; G 100.0 4E-103 1E-107 894.8 41.1 416 403-835 12-467 (473)
4 4acf_A Glutamine synthetase 1; 100.0 6E-100 2E-104 874.2 43.2 419 402-835 20-480 (486)
5 1f52_A Glutamine synthetase; A 100.0 2E-98 7E-103 856.9 42.4 415 403-835 9-462 (468)
6 2j9i_A Glutamate-ammonia ligas 100.0 4.4E-91 1.5E-95 784.7 19.7 392 403-835 9-413 (421)
7 3fky_A Glutamine synthetase; b 100.0 1.8E-78 6.2E-83 670.8 23.5 331 403-765 18-358 (370)
8 2ojw_A Glutamine synthetase; a 100.0 4.1E-77 1.4E-81 663.0 23.9 331 398-762 33-381 (384)
9 2d3a_A Glutamine synthetase; l 100.0 3.3E-75 1.1E-79 642.2 23.3 324 405-762 15-354 (356)
10 3o6x_A Glutamine synthetase; t 100.0 2.4E-60 8.4E-65 547.3 18.7 284 467-768 144-506 (729)
11 2qpx_A Predicted metal-depende 100.0 4.8E-57 1.7E-61 505.7 17.5 362 3-383 2-373 (376)
12 1j5s_A Uronate isomerase; TM00 100.0 1.5E-53 5.1E-58 477.2 22.2 360 4-379 27-462 (463)
13 3iac_A Glucuronate isomerase; 100.0 4.8E-52 1.6E-56 459.4 24.5 362 4-381 20-473 (473)
14 2q01_A Uronate isomerase; stru 100.0 2.3E-51 7.8E-56 463.2 27.2 362 5-385 27-477 (497)
15 2qee_A BH0493 protein; amidohy 100.0 9.9E-37 3.4E-41 335.6 14.8 337 4-384 13-420 (437)
16 3irs_A Uncharacterized protein 99.8 1.2E-18 3.9E-23 188.3 14.2 191 160-384 87-284 (291)
17 3ij6_A Uncharacterized metal-d 99.7 1.1E-17 3.8E-22 182.3 12.4 191 157-381 88-306 (312)
18 4inf_A Metal-dependent hydrola 99.7 3.4E-17 1.2E-21 182.4 11.7 188 156-380 137-373 (373)
19 3nur_A Amidohydrolase; TIM bar 99.7 8.3E-17 2.8E-21 178.4 9.3 189 157-382 120-355 (357)
20 3cjp_A Predicted amidohydrolas 99.6 2.7E-15 9.3E-20 159.8 15.9 179 160-382 82-266 (272)
21 2dvt_A Thermophilic reversible 99.6 1.7E-15 5.7E-20 165.4 12.3 186 159-381 88-325 (327)
22 2ffi_A 2-pyrone-4,6-dicarboxyl 99.6 9.8E-15 3.4E-19 156.6 15.6 182 161-383 78-282 (288)
23 2f6k_A Metal-dependent hydrola 99.6 6.8E-15 2.3E-19 159.1 11.9 188 160-380 85-307 (307)
24 2wm1_A 2-amino-3-carboxymucona 99.6 8E-15 2.7E-19 161.1 12.1 187 160-382 105-332 (336)
25 4i6k_A Amidohydrolase family p 99.6 8.5E-15 2.9E-19 158.1 12.0 184 161-382 91-293 (294)
26 4do7_A Amidohydrolase 2; enzym 99.6 2E-14 6.7E-19 155.9 13.8 151 210-384 118-292 (303)
27 4d9a_A 2-pyrone-4,6-dicarbaxyl 99.5 5.3E-15 1.8E-19 160.4 9.3 186 159-383 90-295 (303)
28 2hbv_A 2-amino-3-carboxymucona 99.5 2E-14 6.8E-19 157.9 12.0 185 160-381 109-333 (334)
29 2gwg_A 4-oxalomesaconate hydra 99.5 3.5E-14 1.2E-18 157.0 10.3 186 159-380 100-332 (350)
30 4dzi_A Putative TIM-barrel met 99.5 2.6E-14 9E-19 161.5 7.8 191 155-384 150-399 (423)
31 2gzx_A Putative TATD related D 99.2 3E-11 1E-15 127.5 11.1 147 209-381 104-256 (265)
32 1j6o_A TATD-related deoxyribon 99.2 3.8E-11 1.3E-15 127.6 9.8 146 209-381 115-266 (268)
33 1yix_A Deoxyribonuclease YCFH; 99.0 5E-10 1.7E-14 118.2 9.0 147 209-382 106-258 (265)
34 1zzm_A Putative deoxyribonucle 98.8 9.8E-09 3.4E-13 108.0 9.3 145 210-381 110-259 (259)
35 1xwy_A DNAse TATD, deoxyribonu 98.8 1.2E-08 4.2E-13 107.6 8.7 145 210-381 108-263 (264)
36 2y1h_A Putative deoxyribonucle 98.6 3E-07 1E-11 97.4 15.0 142 211-381 123-266 (272)
37 1bf6_A Phosphotriesterase homo 98.3 4E-06 1.4E-10 89.1 13.7 148 215-379 139-291 (291)
38 2xio_A Putative deoxyribonucle 98.3 3.8E-06 1.3E-10 90.5 13.5 143 211-381 124-293 (301)
39 3rcm_A TATD family hydrolase; 98.2 2.5E-06 8.6E-11 91.2 10.0 152 212-389 112-273 (287)
40 2vc7_A Aryldialkylphosphatase; 98.1 1.6E-05 5.5E-10 85.7 12.4 148 215-379 152-314 (314)
41 3ovg_A Amidohydrolase; structu 98.1 2.5E-05 8.4E-10 86.1 13.2 154 215-383 170-333 (363)
42 3gg7_A Uncharacterized metallo 98.0 1E-05 3.4E-10 84.9 8.7 143 212-382 102-246 (254)
43 1r8g_A Hypothetical protein YB 97.9 0.00017 5.7E-09 80.0 15.8 95 583-694 48-169 (372)
44 3k2g_A Resiniferatoxin-binding 97.9 9E-05 3.1E-09 81.8 13.5 149 216-383 192-357 (364)
45 3pnz_A Phosphotriesterase fami 97.8 9.8E-05 3.3E-09 80.4 12.2 151 216-381 170-329 (330)
46 3gtx_A Organophosphorus hydrol 97.8 0.00012 4E-09 80.2 12.0 149 217-379 176-339 (339)
47 2ob3_A Parathion hydrolase; me 97.8 0.00013 4.6E-09 79.4 12.4 148 216-379 150-325 (330)
48 3rhg_A Putative phophotriester 97.7 0.00014 4.9E-09 80.2 12.2 154 216-384 181-348 (365)
49 3tn4_A Phosphotriesterase; lac 97.6 0.00056 1.9E-08 75.2 15.1 152 215-379 194-359 (360)
50 3guw_A Uncharacterized protein 97.6 2.2E-05 7.5E-10 82.8 3.5 138 215-383 111-251 (261)
51 3ipw_A Hydrolase TATD family p 97.0 0.0084 2.9E-07 64.9 15.3 139 215-381 155-323 (325)
52 2gwd_A Glutamate cysteine liga 96.7 0.0031 1E-07 71.6 9.2 136 523-694 33-214 (449)
53 2i5g_A Amidohydrolase; NYSGXRC 96.0 0.023 7.7E-07 61.5 10.5 67 301-379 225-320 (325)
54 2z26_A Dihydroorotase, dhoase; 95.9 0.0047 1.6E-07 67.5 4.8 78 213-294 119-200 (347)
55 3e2v_A 3'-5'-exonuclease; stru 95.3 0.22 7.4E-06 55.2 14.9 99 215-328 180-306 (401)
56 3ly0_A Dipeptidase AC. metallo 91.8 0.8 2.7E-05 49.9 11.1 70 301-380 282-353 (364)
57 1itu_A Renal dipeptidase; glyc 91.5 0.68 2.3E-05 50.6 10.2 70 301-380 264-336 (369)
58 3b40_A PVDM, probable dipeptid 91.4 0.77 2.6E-05 51.1 10.7 70 301-380 335-406 (417)
59 3id7_A Dipeptidase; streptomyc 91.1 0.65 2.2E-05 51.3 9.7 71 300-380 295-368 (400)
60 3neh_A Renal dipeptidase famil 91.0 1.3 4.4E-05 47.4 11.6 70 300-380 238-310 (318)
61 3ln6_A Glutathione biosynthesi 90.9 0.89 3.1E-05 54.6 11.4 117 584-700 54-202 (750)
62 1va6_A Glutamate--cysteine lig 90.7 0.28 9.7E-06 55.9 6.4 109 584-694 56-202 (518)
63 2rag_A Dipeptidase; aminohydro 89.6 1.5 5.2E-05 48.7 11.1 69 301-379 336-406 (417)
64 3pnu_A Dihydroorotase; TIM bar 87.5 2.9 9.8E-05 45.6 11.4 75 212-294 134-211 (359)
65 2vun_A Enamidase; nicotinate d 87.2 9.3 0.00032 41.1 15.5 143 212-380 172-320 (386)
66 3ln7_A Glutathione biosynthesi 84.9 4.1 0.00014 48.9 11.7 112 584-695 53-198 (757)
67 3gnh_A L-lysine, L-arginine ca 82.4 27 0.00094 37.4 16.5 140 210-384 203-362 (403)
68 2z00_A Dihydroorotase; zinc bi 82.2 4.4 0.00015 44.3 10.0 25 212-236 153-177 (426)
69 3hm7_A Allantoinase; metallo-d 79.7 8.8 0.0003 42.5 11.5 166 212-383 167-380 (448)
70 3gri_A Dihydroorotase, dhoase; 72.6 7.9 0.00027 42.7 8.5 163 212-380 156-362 (424)
71 3mpg_A Dihydroorotase, dhoase; 71.6 12 0.00042 41.1 9.7 163 212-381 157-364 (428)
72 3e74_A Allantoinase; (beta/alp 69.0 21 0.00071 40.1 11.0 164 212-381 185-395 (473)
73 2ics_A Adenine deaminase; TIM 64.0 34 0.0012 36.3 11.2 136 215-382 169-319 (379)
74 3nqb_A Adenine deaminase 2; PS 61.3 85 0.0029 36.4 14.5 136 212-381 200-337 (608)
75 4f0r_A 5-methylthioadenosine/S 59.1 34 0.0012 37.4 10.3 158 212-384 198-361 (447)
76 3sfw_A Dihydropyrimidinase; hy 57.9 81 0.0028 34.8 13.2 165 212-382 162-380 (461)
77 4aql_A Guanine deaminase; hydr 54.9 1.1E+02 0.0038 33.9 13.7 158 212-383 241-407 (476)
78 1nxi_A Conserved hypothetical 53.6 35 0.0012 31.3 7.6 91 510-627 21-114 (132)
79 2qs8_A XAA-Pro dipeptidase; am 53.2 1.6E+02 0.0055 31.5 14.4 138 211-383 213-371 (418)
80 3feq_A Putative amidohydrolase 52.2 94 0.0032 33.3 12.3 138 211-384 209-366 (423)
81 3gip_A N-acyl-D-glutamate deac 50.6 86 0.0029 34.9 11.9 57 318-381 358-415 (480)
82 1zpv_A ACT domain protein; str 48.0 13 0.00043 31.2 3.4 66 566-633 17-82 (91)
83 3be7_A Zn-dependent arginine c 47.9 1.2E+02 0.0042 32.2 12.4 135 212-381 204-358 (408)
84 3nzt_A Glutamate--cysteine lig 46.9 18 0.00062 41.1 5.3 143 523-694 31-208 (525)
85 3dc8_A Dihydropyrimidinase; TI 46.5 1E+02 0.0036 34.4 11.7 157 213-382 160-377 (490)
86 4dzh_A Amidohydrolase; adenosi 45.1 87 0.003 34.6 10.7 155 214-384 209-370 (472)
87 3lnp_A Amidohydrolase family p 44.9 95 0.0032 34.0 11.0 155 214-383 227-387 (468)
88 2r8c_A Putative amidohydrolase 44.7 3.1E+02 0.011 29.3 15.1 25 211-235 212-236 (426)
89 4dyk_A Amidohydrolase; adenosi 44.0 1.1E+02 0.0039 33.1 11.4 157 213-384 201-363 (451)
90 2fty_A Dihydropyrimidinase; al 41.5 76 0.0026 36.3 9.7 33 346-382 402-435 (559)
91 1xrt_A Dihydroorotase, dhoase; 35.6 1.6E+02 0.0054 32.3 10.9 25 212-236 204-228 (467)
92 2ood_A BLR3880 protein; PSI-II 33.2 1.9E+02 0.0064 31.9 11.0 26 211-236 211-237 (475)
93 3ooq_A Amidohydrolase; structu 32.8 1.6E+02 0.0053 31.5 10.0 135 220-384 213-350 (396)
94 4gxw_A Adenosine deaminase; am 30.3 55 0.0019 35.7 5.7 84 147-236 129-219 (380)
95 1rk6_A D-aminoacylase; TIM bar 28.5 1.4E+02 0.0049 33.0 9.1 56 319-381 373-429 (496)
96 3h4u_A Amidohydrolase; signatu 27.8 1.2E+02 0.0041 33.3 8.2 154 213-382 239-398 (479)
97 3rys_A Adenosine deaminase 1; 26.7 62 0.0021 34.7 5.3 158 147-331 113-286 (343)
98 3g8r_A Probable spore coat pol 25.3 66 0.0023 34.6 5.0 68 218-294 126-201 (350)
99 1gkp_A Hydantoinase; hydrolase 24.9 6.5E+02 0.022 26.8 13.7 24 212-235 161-184 (458)
100 1u8s_A Glycine cleavage system 23.4 80 0.0027 30.4 5.0 78 565-646 104-189 (192)
101 3ose_A Serine/threonine-protei 22.6 99 0.0034 27.8 5.0 68 559-626 34-120 (120)
102 2paj_A Putative cytosine/guani 22.1 3.1E+02 0.01 30.0 10.2 70 211-283 226-299 (492)
103 3ls9_A Triazine hydrolase; atr 20.8 5.5E+02 0.019 27.4 11.9 69 212-284 217-289 (456)
104 1gkr_A Hydantoinase, non-ATP d 20.6 5.5E+02 0.019 27.4 11.8 33 346-382 344-376 (458)
No 1
>4hpp_A Probable glutamine synthetase; glutamine synthase homolog, glutamate, polyamine, ligase; HET: GLU; 2.50A {Pseudomonas aeruginosa}
Probab=100.00 E-value=1.6e-106 Score=912.52 Aligned_cols=422 Identities=30% Similarity=0.455 Sum_probs=376.8
Q ss_pred cCCccEEEEEEecCCCCcceEEEechhhhhHHhhcccccccccccccccCCCCCCCCCCCCCCcEEEEEecCCceeccCC
Q 003194 405 ESDVSLIRVIWVDASGQHRCRVVPVKRFNDIVTKYGVGLTFACMGMTSAVDGPADGTNLSGTGEIRLMPDLSTRWRIPWQ 484 (840)
Q Consensus 405 ~~~i~~v~l~~~D~~G~~R~k~vp~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~~~~~~~~~~d~~l~PD~~T~~~~Pw~ 484 (840)
-++|+||+++|+|++|++|+|+||+++|.+.+ ++|++|+++.+.++.+ +.....+++++++|++|+||++|++++||.
T Consensus 4 ~~~v~~v~l~~~D~~G~~r~k~vp~~~~~~~~-~~G~~f~~s~~~~~~~-~~~~~~~~~~~~~D~~l~PD~~T~~~~Pw~ 81 (443)
T 4hpp_A 4 LQPVRLVSFVTTDLAGITRGRSLPLATLEEQL-ASGCGWVPANSSLTPQ-DLIDESSPWGSHGDLRLLPDPNSRVRVEQG 81 (443)
T ss_dssp CCCCCEEEEEEECTTSCEEEEEEEGGGHHHHH-TTCEEECGGGGGCCTT-SCCCTTCSCSSSCCEEEEECGGGCEEECCC
T ss_pred CCCCCEEEEEEECCCCCEEEEEEEHHHHHHHH-hCCcccCchhheeecc-CccccccCCCCCCCEEEEEcccceEECCcc
Confidence 36899999999999999999999999998864 7899999987777653 333343456788999999999999999999
Q ss_pred c-----cccceeeeccCCCCCcCCCChHHHHHHHHHHHHHhcCceeeeeeeeEEEEEeecccCCCCCcccCCCCCcccCC
Q 003194 485 K-----QEEMIMADMHLKPGEPWEYCPREALRKVSRLLKEEFNLVLNAGFEIEFYLLKSVLREGKEEWVPIDFTPYCSTA 559 (840)
Q Consensus 485 ~-----~~a~v~~d~~~~~g~p~~~~PR~~Lkr~~~~~~~~~G~~~~~g~E~EF~l~~~~~~~~~~~~~p~~~~~~~~~~ 559 (840)
+ ++++|+||++++||+|++.|||++|||++++++ +.|+++++|+|+|||||+. .|.++++||+..
T Consensus 82 ~~~~~~~~a~v~cd~~~~dG~p~~~~pR~~L~r~~~~~~-~~G~~~~~g~E~EF~l~~~---------~p~~~~~~y~~~ 151 (443)
T 4hpp_A 82 PDAAAPALDYLHGNLVETDGTPWPACPRSLLRAEVERYR-DSGLQVIAAFEHEFSLLGL---------PGERPAAAFSLQ 151 (443)
T ss_dssp SSTTSCCEEEEEEEEECTTSCBCTTCHHHHHHHHHHHHH-HTTEEEEEEEEEEEEEECC---------CSSSCCCTTCHH
T ss_pred cccCCCCeEEEEEEEECCCCCCCCCChHHHHHHHHHHHH-HcCCeEEEEeeeEEEEecc---------ccCCCCccCCCC
Confidence 8 789999999999999999999999999999998 6899999999999999963 355678899888
Q ss_pred ccccchHHHHHHHHHHHhCCCceeeeccCCCCCceEEecCcchHHHHHhHHHHHHHHHHHHHHHcCCeeEecccccCCCC
Q 003194 560 AYDAVSPVFQEVLADLHSLNISVEQLHAEAGKGQFEIALGHTVAAKAADNLIFTREVLRAVARKHGLLATFVPKFALDDI 639 (840)
Q Consensus 560 ~~~~~~~~~~~i~~~l~~~Gi~ve~~h~E~gpGQ~Ei~l~~~~~l~aaD~~~~~r~~ik~vA~~~Gl~ATFmpKP~~~~~ 639 (840)
+.+..++++++|++.|+++||+||++|+|+|||||||++.|+++|++||+++++|++||+||++||+.|||||||+.+.+
T Consensus 152 ~~~~~~~~~~~i~~~l~~~Gi~ve~~h~E~~pgQ~Ei~~~~~~~l~aAD~~~~~k~~vk~vA~~~G~~aTFmpKP~~~~~ 231 (443)
T 4hpp_A 152 AQRAAGQFPGWLVSALAQAGTEPEMFLPEYGQRQYEVTCRPAQGVAAADRAVNVREVTREVARQMGLRTCFAPLPAPGAV 231 (443)
T ss_dssp HHHHTTTHHHHHHHHHHHTTCCEEEEEECSSTTEEEEEECCEETHHHHHHHHHHHHHHHHHHHHHTCEEECSSSSSTTCC
T ss_pred cccchHHHHHHHHHHHHHCCCCeEEeecCCCCCceEEEecCCcHHHHHHHHHHHHHHHHHHHHHhCCEEEEecccCCCCC
Confidence 88889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccccccccccC-CCcccccCCCCCcCCCcHHHHHHHHHHHHhHHhhhhhcCCCCCccccCCCCCccCccccccccCCC
Q 003194 640 GSGSHVHLSLWQN-GENVFMASDSSSKHGMSSVGEKFMAGVLHHLSSILAFTAPVPNSYDRIQPNTWSGAYQCWGKENRE 718 (840)
Q Consensus 640 GsG~H~H~Sl~~~-g~n~f~~~d~~~~~~lS~~~~~fiaGlL~h~~al~a~~~Pt~nSY~Rl~~~~~ap~~~~WG~~NR~ 718 (840)
|||||+|+|||++ |+|+|. |++++.+||+++++||||||+|++++++|++||+||||||+||+|||++++||.+||+
T Consensus 232 GsG~H~h~Sl~~~~G~n~f~--~~~~~~~lS~~~~~fiaGll~h~~~l~a~~~P~~NSYkRL~pg~~AP~~~~WG~~NRs 309 (443)
T 4hpp_A 232 TNGVHLHLSLQHADGSPLLY--EPGRPNDLSELGEHWAAGVLAHLPALCALTAPTAASYLRLKPHHWSAAYACLGLRNRE 309 (443)
T ss_dssp CCCEEEEEEEEETTSCBSSB--CTTSGGGBCHHHHHHHHHHHHHHHHHHHHHSCSGGGHHHHSCSTTCCCBCCEESSCTT
T ss_pred cccceeeeeeecCCCCcccc--CCCCccchhHHHHHHHHHHHHHHHHHHHHhCCCCcchhccCCCCcCCCcceeccCCCc
Confidence 9999999999975 699998 6667789999999999999999999999999999999999999999999999999999
Q ss_pred CcccccCCC---CCCCCccceEEEcCCCCCCCHHHHHHHHHHHHHHhhhc-CCCCCCCCCCcccccC------CCCCCCc
Q 003194 719 APLRTACPP---GVKDGVVSNFELKSFDGCANPHLGLAAIIASGIDGLRR-LCLPEPIDANPASLDG------KLQRLPT 788 (840)
Q Consensus 719 ~~iRv~~~~---~~~~~~~~~~E~R~~d~~aNPYLalAailaAGl~GI~~-l~~~~~~~~~~~~~~~------~~~~LP~ 788 (840)
++||||... +.+.+..+|||+|++|++|||||++||+|+||++||++ ++||+|+++|+++++. ++++||+
T Consensus 310 a~iRip~~~~~~~~~~~~~~riE~R~pd~~aNPYLa~AaiLaAGl~GI~~~l~p~~p~~~~~y~~~~~e~~~~~i~~LP~ 389 (443)
T 4hpp_A 310 AALRICPVVSVGGKPLGKQYNLEFRPMDATTCPHLAMAAVLIAGRLGIERRLPLRALADVDPHGLSDEERQARGIQALPA 389 (443)
T ss_dssp SSEEEECCCCSSSCCSSTTCEEEEEEECTTSCHHHHHHHHHHHHHHHHHTTCCCC-----------------CCCCBCCS
T ss_pred eeEEeccccccCCCccccccEEEEcCCCCCcCHHHHHHHHHHHHHHHHHhCCCCCCccCCChhhCCHHHHhhhccccCCC
Confidence 999999742 11002457999999999999999999999999999999 9999999999987642 5778999
Q ss_pred CHHHHHHHHhcChHHHhhhcHHHHHHHHHHHHHHHHHHhcCCchHH--HHHhhC
Q 003194 789 SLSESVQALEKDDILRDMIGEKLLIAIKGIRKAEINYYSLNKDAYK--QLIHRY 840 (840)
Q Consensus 789 sl~eAl~~le~d~~l~~~lG~~~v~~y~~~k~~E~~~~~~~~~~~~--~l~~ry 840 (840)
||.|||++|++|++++++||++|+++|+++||+||++|.+.+++|+ +..++|
T Consensus 390 sL~eAl~~l~~d~~~~~~lG~~~v~~y~~~K~~E~~~~~~~vt~~E~~~yl~~y 443 (443)
T 4hpp_A 390 TLGDALDCLQRDEALCAELPKPLLDTYLAMKRHELALTAGLSDDDLCRHYAELY 443 (443)
T ss_dssp SHHHHHHHHHTCHHHHTTSCHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHTTTC
T ss_pred CHHHHHHHHhcChHHhHhccHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhhC
Confidence 9999999999999999999999999999999999999999999885 466666
No 2
>3qaj_A Glutamine synthetase; AMP-PCP, ACP, ligase; HET: GLU ADP RGP CIT AMP; 3.05A {Bacillus subtilis}
Probab=100.00 E-value=8.6e-107 Score=916.05 Aligned_cols=413 Identities=28% Similarity=0.500 Sum_probs=380.8
Q ss_pred hccCCccEEEEEEecCCCCcceEEEechhhhhHHhhcccccccccc-cccccCCCCCCCCCCCCCCcEEEEEecCCceec
Q 003194 403 AFESDVSLIRVIWVDASGQHRCRVVPVKRFNDIVTKYGVGLTFACM-GMTSAVDGPADGTNLSGTGEIRLMPDLSTRWRI 481 (840)
Q Consensus 403 ~~~~~i~~v~l~~~D~~G~~R~k~vp~~~~~~~~~~~g~~~~~~~~-~~~~~~d~~~~~~~~~~~~d~~l~PD~~T~~~~ 481 (840)
+++++|+||+++|+|++|++|+|.||+++|.+.+ ++|++|++++. ++. ..+.+|++|+||++|++++
T Consensus 13 ~~~~~i~~v~l~~~D~~G~~r~k~ip~~~~~~~~-~~G~~fdgssi~g~~-----------~~~~~D~~l~PD~~T~~~~ 80 (444)
T 3qaj_A 13 VKEENVKYIRLQFTDILGTIKNVEIPVSQLGKAL-DNKVMFDGSSIEGFV-----------RIEESDMYLYPDLNTFVIF 80 (444)
T ss_dssp HHHHTCCEEEEEEECSSSCEEEEEEEGGGHHHHH-TTCCEEETTTSTTSS-----------CTTCCEEECCBCGGGCEEE
T ss_pred HHhCCCCEEEEEEECCCCCEEEEEEeHHHHHHHH-hCCccccCccccCcc-----------CCCCCCEEEEEecCceEEC
Confidence 3455999999999999999999999999998764 78999887653 111 1246899999999999999
Q ss_pred cCCcc---ccceeeeccCCCCCcCCCChHHHHHHHHHHHHHhcCce-eeeeeeeEEEEEeecccCCCCCcccCCCCCccc
Q 003194 482 PWQKQ---EEMIMADMHLKPGEPWEYCPREALRKVSRLLKEEFNLV-LNAGFEIEFYLLKSVLREGKEEWVPIDFTPYCS 557 (840)
Q Consensus 482 Pw~~~---~a~v~~d~~~~~g~p~~~~PR~~Lkr~~~~~~~~~G~~-~~~g~E~EF~l~~~~~~~~~~~~~p~~~~~~~~ 557 (840)
||.++ +++|+||++++||+|++.|||++|||++++++ +.|++ +++|+|+|||||+.. .++.+...|.++++||+
T Consensus 81 Pw~~~~~~~a~v~cd~~~~dG~p~~~~pR~iLkr~~~~~~-~~G~~~~~~g~E~EF~l~~~~-~~g~~~~~~~~~~~y~~ 158 (444)
T 3qaj_A 81 PWTAEKGKVARFICDIYNPDGTPFEGDPRNNLKRILKEME-DLGFSDFNLGPEPEFFLFKLD-EKGEPTLELNDKGGYFD 158 (444)
T ss_dssp HHHHHHHCEEEEEBCCBCTTSCBCSSCHHHHHHHHHHHHH-TTTCCEEEEEEEECEEEEEEC-SSSCEEEEESCCCCTTC
T ss_pred ccccCCCCeEEEEEEEECCCCCCCCCChHHHHHHHHHHHH-HcCCCeeeEEeceEEEEEecC-CCCCCCCcCcCCCCccc
Confidence 99886 89999999999999999999999999999998 58999 999999999999973 23444445677889999
Q ss_pred CCccccchHHHHHHHHHHHhCCCceeeeccCCCCCceEEecCcchHHHHHhHHHHHHHHHHHHHHHcCCeeEecccccCC
Q 003194 558 TAAYDAVSPVFQEVLADLHSLNISVEQLHAEAGKGQFEIALGHTVAAKAADNLIFTREVLRAVARKHGLLATFVPKFALD 637 (840)
Q Consensus 558 ~~~~~~~~~~~~~i~~~l~~~Gi~ve~~h~E~gpGQ~Ei~l~~~~~l~aaD~~~~~r~~ik~vA~~~Gl~ATFmpKP~~~ 637 (840)
..+.+...+++++|+++|+++||+||++|+|+|||||||++.|+++|+|||+++++|++||+||++||+.|||||||+.+
T Consensus 159 ~~~~d~~~~~~~~i~~~l~~~Gi~ve~~h~E~~pGQ~Ei~~~~~~~l~aAD~~~~~k~~vk~vA~~~G~~aTFmpKP~~~ 238 (444)
T 3qaj_A 159 LAPTDLGENCRRDIVLELEEMGFEIEASHHEVAPGQHEIDFKYAGAVRSCDDIQTFKLVVKTIARKHGLHATFMPKPLFG 238 (444)
T ss_dssp CTTTSCCTTHHHHHHHHHHTTTCCEEEEEECSSTTEEEEEECCEEHHHHHHHHHHHHHHHHHHHHHTTEEEECCSCSSTT
T ss_pred cCCCcchHHHHHHHHHHHHHCCCCeEEeEcCcCCCcEEEecCCChHHHHHHHHHHHHHHHHHHHHHcCCEEEEcCCcCCC
Confidence 88889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcccccccccccCCCcccccCCCCCcCCCcHHHHHHHHHHHHhHHhhhhhcCCCCCccccCCCCCccCccccccccCC
Q 003194 638 DIGSGSHVHLSLWQNGENVFMASDSSSKHGMSSVGEKFMAGVLHHLSSILAFTAPVPNSYDRIQPNTWSGAYQCWGKENR 717 (840)
Q Consensus 638 ~~GsG~H~H~Sl~~~g~n~f~~~d~~~~~~lS~~~~~fiaGlL~h~~al~a~~~Pt~nSY~Rl~~~~~ap~~~~WG~~NR 717 (840)
.+|||||+|+|||++|+|+|. +++++.+||+++++||||||+|++++++|++||+||||||+||+|||++++||.+||
T Consensus 239 ~~GsG~H~H~Sl~~~g~n~f~--~~~~~~~lS~~~~~fiaGlL~h~~~l~a~~~PtvNSYkRl~pg~~AP~~~~Wg~~NR 316 (444)
T 3qaj_A 239 VNGSGMHCNLSLFKNGVNAFF--DENADLQLSETAKHFIAGIVKHATSFTAVTNPTVNSYKRLVPGYEAPCYVAWSAQNR 316 (444)
T ss_dssp SCCCCEEEEEEEEETTEETTC--CTTSSSSCCHHHHHHHHHHHHTHHHHHHHHSCSSTHHHHSCTTSSSSCBCCEESSCS
T ss_pred CCCCcceeeeccccCCCcccC--CCCcccchHHHHHHHHHHHHHHHHHHHHHHCCCCcccccCCCCCcCCCcceeecCCC
Confidence 999999999999999999998 666778999999999999999999999999999999999999999999999999999
Q ss_pred CCcccccCCCCCCCCccceEEEcCCCCCCCHHHHHHHHHHHHHHhhhc-CCCCCCCCCCcccccC------CCCCCCcCH
Q 003194 718 EAPLRTACPPGVKDGVVSNFELKSFDGCANPHLGLAAIIASGIDGLRR-LCLPEPIDANPASLDG------KLQRLPTSL 790 (840)
Q Consensus 718 ~~~iRv~~~~~~~~~~~~~~E~R~~d~~aNPYLalAailaAGl~GI~~-l~~~~~~~~~~~~~~~------~~~~LP~sl 790 (840)
+++||||... +..+|||+|++|++|||||++||+|+||++||++ ++||+|+++|+++++. ++++||+||
T Consensus 317 sa~iRip~~~----~~~~RiE~R~pd~~aNPYLa~Aa~LaAGldGI~~~l~p~~p~~~n~y~~~~~e~~~~~~~~LP~sL 392 (444)
T 3qaj_A 317 SPLIRIPASR----GISTRVEVRSVDPAANPYLALSVLLAAGLDGIKNKLEAPAPIDRNIYVMSKEERMENGIVDLPATL 392 (444)
T ss_dssp SSSEECCSCC----GGGCCEEECCCCTTSCHHHHHHHHHHHHHHHHHTTCCCCCCCCSCGGGSCTTTTTTTTCCBCCSSH
T ss_pred cceEeeccCC----CCCceEEecCCCCCCCHHHHHHHHHHHHHHHHHhCCCCCCCcCCChhhCCHHHHHhhccCCCCCCH
Confidence 9999999622 2458999999999999999999999999999999 9999999999987642 567899999
Q ss_pred HHHHHHHhcChHHHhhhcHHHHHHHHHHHHHHHHHHhcCCchHHH
Q 003194 791 SESVQALEKDDILRDMIGEKLLIAIKGIRKAEINYYSLNKDAYKQ 835 (840)
Q Consensus 791 ~eAl~~le~d~~l~~~lG~~~v~~y~~~k~~E~~~~~~~~~~~~~ 835 (840)
.|||++|++|++++++||++|+++|+++|+.||++|.+.+++|+.
T Consensus 393 ~eAl~~l~~d~~l~~~lG~~~v~~y~~~K~~E~~~~~~~vt~wE~ 437 (444)
T 3qaj_A 393 AEALEEFKSNEVMVKALGEHLFEHFIEAKEIEWDMFRTQVHPWER 437 (444)
T ss_dssp HHHHHHHHTCHHHHHHHCTTTTHHHHHHHHHHHHHHHHCCCHHHH
T ss_pred HHHHHHHhCCcHHHHhcCHHHHHHHHHHHHHHHHHHhcCCCHHHH
Confidence 999999999999999999999999999999999999999999976
No 3
>3ng0_A Glutamine synthetase; GSI, nitrogen metabolism, synec ligase; HET: ANP; 2.80A {Synechocystis SP}
Probab=100.00 E-value=3.9e-103 Score=894.81 Aligned_cols=416 Identities=26% Similarity=0.444 Sum_probs=371.0
Q ss_pred hccCCccEEEEEEecCCCCcceEEEechhhhhHHhhcccccccccc-cccccCCCCCCCCCCCCCCcEEEEEecCCceec
Q 003194 403 AFESDVSLIRVIWVDASGQHRCRVVPVKRFNDIVTKYGVGLTFACM-GMTSAVDGPADGTNLSGTGEIRLMPDLSTRWRI 481 (840)
Q Consensus 403 ~~~~~i~~v~l~~~D~~G~~R~k~vp~~~~~~~~~~~g~~~~~~~~-~~~~~~d~~~~~~~~~~~~d~~l~PD~~T~~~~ 481 (840)
+++++|+||+++|+|++|++|+|.||+++|.+.+.++|++|+++++ ++. ..+.+|++|+||++|++++
T Consensus 12 ~~~~~i~~V~l~f~D~~G~~r~k~ip~~~~~~~~~~~G~~fdgss~~g~~-----------~~~~sD~~l~PD~~T~~~~ 80 (473)
T 3ng0_A 12 IQDENIKIIDLKFIDTPGIWQHCSFYYDQLDENSFTEGIPFDGSSIRGWK-----------AINESDMCMVPDPNTATID 80 (473)
T ss_dssp HHHTTCCEEEEEEECSSSCEEEEEEEGGGCCGGGGTTCEEEETTSSTTSC-----------CGGGCEEEEEECGGGCEEC
T ss_pred HHhCCCCEEEEEEECCCCCEEEEEEeHHHHHHHHHhCCCccccccccccc-----------cCCCCcEEEEeecCccEEC
Confidence 4455999999999999999999999999998744578999987664 221 1236799999999999999
Q ss_pred cCCcc-ccceeeeccCC-CCCcCCCChHHHHHHHHHHHHHhcCc--eeeeeeeeEEEEEeeccc----------------
Q 003194 482 PWQKQ-EEMIMADMHLK-PGEPWEYCPREALRKVSRLLKEEFNL--VLNAGFEIEFYLLKSVLR---------------- 541 (840)
Q Consensus 482 Pw~~~-~a~v~~d~~~~-~g~p~~~~PR~~Lkr~~~~~~~~~G~--~~~~g~E~EF~l~~~~~~---------------- 541 (840)
||.++ +++|+||++++ +|+|++.|||++|||+++++++ .|+ ++++|+|+|||||++...
T Consensus 81 Pw~~~~~a~v~cd~~~~~~g~p~~~~pR~iLkr~~~~~~~-~G~~~~~~~g~E~EF~l~~~~~~~~~~~~~~~~~~~~~~ 159 (473)
T 3ng0_A 81 PFCKEPTLSMICSIKEPRTGEWYNRDPRTIAAKAAEYLRG-TGIADTVYFGPEAEFFLFDDIRFGQTENSSYYFADSVEG 159 (473)
T ss_dssp TTCSSCEEEEEEEEECTTTSSBCTTCHHHHHHHHHHHHHH-HTSCSEEEEEEEECEEEESEEEEEECSSCEEEEEECTTC
T ss_pred CcCCCCcEEEEEEEeECCCCCCCCCChHHHHHHHHHHHHH-cCCCcceEEEeeeEEEEEeeccccccccccccccccccc
Confidence 99986 89999999998 9999999999999999999985 566 899999999999985210
Q ss_pred ---CC------CCCcccCCCCCcccCCccccchHHHHHHHHHHHhCCCceeeeccCCC-CCceEEecCcchHHHHHhHHH
Q 003194 542 ---EG------KEEWVPIDFTPYCSTAAYDAVSPVFQEVLADLHSLNISVEQLHAEAG-KGQFEIALGHTVAAKAADNLI 611 (840)
Q Consensus 542 ---~~------~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~l~~~Gi~ve~~h~E~g-pGQ~Ei~l~~~~~l~aaD~~~ 611 (840)
.+ .....|.++++|+...+.+...+++++|++.|+++||+||++|+|+| ||||||++.|+++|+|||+++
T Consensus 160 ~~~~~~~~~~~~~g~~~~~~~~y~~~~~~d~~~~~~~~i~~~l~~~Gi~ve~~h~E~~~pGQ~Ei~~~~~~~l~aAD~~~ 239 (473)
T 3ng0_A 160 RWNTGREEEGGNLGYKPGYKQGYFPVAPTDTAQDIRTEMLLTMAAFGVPIEKHHHEVASGGQNELGIKFDKLVNSADNLM 239 (473)
T ss_dssp GGGTTCCCTTCCCCCCCCTTCCSSCCTTTCCCHHHHHHHHHHHHHTTCCEEEEEECSSTTTEEEEEECCEEHHHHHHHHH
T ss_pred ccccccccccCCCCcccCCCccccccCccchhHHHHHHHHHHHHHCCCCeEEeecCcCCCCceEEEccCCCHHHHHHHHH
Confidence 00 01233445677888888889999999999999999999999999999 999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCeeEecccccCCCCCcccccccccccCCCcccccCCCCCcCCCcHHHHHHHHHHHHhHHhhhhhcC
Q 003194 612 FTREVLRAVARKHGLLATFVPKFALDDIGSGSHVHLSLWQNGENVFMASDSSSKHGMSSVGEKFMAGVLHHLSSILAFTA 691 (840)
Q Consensus 612 ~~r~~ik~vA~~~Gl~ATFmpKP~~~~~GsG~H~H~Sl~~~g~n~f~~~d~~~~~~lS~~~~~fiaGlL~h~~al~a~~~ 691 (840)
++|++||+||++||+.|||||||+.+.+|||||+|+|||++|+|+|. +++ ..+||+++++||||||+|++++++|++
T Consensus 240 ~~k~~vk~vA~~~G~~aTFmpKP~~~~~GSG~H~H~Sl~~~g~n~F~--~~~-~~~lS~~~~~fiaGlL~h~~~l~a~~~ 316 (473)
T 3ng0_A 240 IYKYVIKNVAKKYGKTVTFMPKPIFNDNGSGMHVHQSLWKDGQPLFA--GDK-YAGFSQMGLWYIGGILKHAPALLAFTN 316 (473)
T ss_dssp HHHHHHHHHHHHTTCEEECCSCSSTTSCCCCEEEEEEEEETTEETTB--SSS-GGGBCHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHhCCEEEEcCcccCCCCCCeeEEEEeeccCCccccC--CCC-ccchhHHHHHHHHHHHHHHHHHHHHhC
Confidence 99999999999999999999999999999999999999999999998 433 678999999999999999999999999
Q ss_pred CCCCccccCCCCCccCccccccccCCCCcccccCCCCCCCCccceEEEcCCCCCCCHHHHHHHHHHHHHHhhhc-CCCCC
Q 003194 692 PVPNSYDRIQPNTWSGAYQCWGKENREAPLRTACPPGVKDGVVSNFELKSFDGCANPHLGLAAIIASGIDGLRR-LCLPE 770 (840)
Q Consensus 692 Pt~nSY~Rl~~~~~ap~~~~WG~~NR~~~iRv~~~~~~~~~~~~~~E~R~~d~~aNPYLalAailaAGl~GI~~-l~~~~ 770 (840)
||+||||||+||+|||++++||.+||+++||||...+ .+..+|||+|++|++|||||++||+|+||++||++ ++||+
T Consensus 317 Pt~NSYkRL~pg~~AP~~~~Wg~~NRsa~iRip~~~~--~~~~~RiE~R~pd~~aNPYLa~Aa~LaAGldGI~~~l~p~~ 394 (473)
T 3ng0_A 317 PTTNSYKRLVPGFEAPVNLAYSQGNRSASVRIPLSGG--NPKAKRLEFRCPDATSNPYLAFAAMLCAGIDGIKNQIDPGE 394 (473)
T ss_dssp CSTTHHHHBBTTTBCCCBCCEEESCTTSSEEECCCSS--CGGGCCEEECSCCTTSCHHHHHHHHHHHHHHHHHHCCCCCC
T ss_pred CCcchhhcccCCCcCccceeeeccCCcCceeeeccCC--CCCcceEEeecCCCCCCHHHHHHHHHHHHHHHHHhCCCCCC
Confidence 9999999999999999999999999999999996311 23468999999999999999999999999999999 99999
Q ss_pred CCCCCcccccC----CCCCCCcCHHHHHHHHhcCh-HHH--hhhcHHHHHHHHHHHHH-HHHHHhcCCchHHH
Q 003194 771 PIDANPASLDG----KLQRLPTSLSESVQALEKDD-ILR--DMIGEKLLIAIKGIRKA-EINYYSLNKDAYKQ 835 (840)
Q Consensus 771 ~~~~~~~~~~~----~~~~LP~sl~eAl~~le~d~-~l~--~~lG~~~v~~y~~~k~~-E~~~~~~~~~~~~~ 835 (840)
|+++|+++++. .+++||+||.|||++|++|+ +++ ++||++|+++|+++||. ||+.|.+.|++||.
T Consensus 395 p~~~n~y~~~~~e~~~~~~LP~sL~eAl~~l~~d~~~l~~~~~lG~~~v~~y~~~K~~~E~~~~~~~vt~wE~ 467 (473)
T 3ng0_A 395 PLDVDIYDLSPEELAKIPSTPGSLEAALEALEKDHEFLTGTGVFSPDFVESWIEYKLDNEVNPMRLRPHPYEF 467 (473)
T ss_dssp CCCCCC------CTTSSCBCCSSHHHHHHHHHHSCHHHHTTTSSCHHHHHHHHHHHHHHTHHHHHHSCCTHHH
T ss_pred CCCCchhhCCHhHhcCcccCCCCHHHHHHHHHcChhhhhhhcccCHHHHHHHHHHHHHHHHHHHHcCCCHHHH
Confidence 99999987642 57789999999999999997 665 89999999999999999 99999999999986
No 4
>4acf_A Glutamine synthetase 1; ligase, nucleotide-binding, TRI-substituted IMID TAUT state, RV2220, GLNA1; HET: 46B P3S; 2.00A {Mycobacterium tuberculosis} PDB: 2wgs_A* 2whi_A* 3zxr_A* 3zxv_A* 2bvc_A* 1hto_A* 1htq_A*
Probab=100.00 E-value=5.9e-100 Score=874.22 Aligned_cols=419 Identities=26% Similarity=0.416 Sum_probs=373.4
Q ss_pred hhccCCccEEEEEEecCCCCcceEEEechhhhhHHhhcccccccccc-cccccCCCCCCCCCCCCCCcEEEEEecCCcee
Q 003194 402 DAFESDVSLIRVIWVDASGQHRCRVVPVKRFNDIVTKYGVGLTFACM-GMTSAVDGPADGTNLSGTGEIRLMPDLSTRWR 480 (840)
Q Consensus 402 ~~~~~~i~~v~l~~~D~~G~~R~k~vp~~~~~~~~~~~g~~~~~~~~-~~~~~~d~~~~~~~~~~~~d~~l~PD~~T~~~ 480 (840)
++++++|+||+++|+|++|++|+|.||+++|.+.+.++|++|+++++ ++.. ...+|++|+||++|+++
T Consensus 20 ~i~~~~I~~V~l~f~D~~G~~r~k~ip~~~~~~~~~~~G~~fdgssi~G~~~-----------~~~sD~~l~PD~~T~~~ 88 (486)
T 4acf_A 20 LAKDEKVEYVDVRFCDLPGIMQHFTIPASAFDKSVFDDGLAFDGSSIRGFQS-----------IHESDMLLLPDPETARI 88 (486)
T ss_dssp HHHHTTCCEEEEEEECSSSCEEEEEEEGGGCSHHHHHTCEEEEGGGSTTSCC-----------GGGCEEEEEECGGGCEE
T ss_pred HHHHCCCcEEEEEEECCCCcEEEEEEEHHHHHHHHHHCCCeeeccccccccc-----------CCCCCEEEEEccceeEE
Confidence 45566999999999999999999999999998766689999987764 2211 12469999999999999
Q ss_pred ccCCccc-cceeeeccCC-CCCcCCCChHHHHHHHHHHHHHh-cCceeeeeeeeEEEEEeecccC---------------
Q 003194 481 IPWQKQE-EMIMADMHLK-PGEPWEYCPREALRKVSRLLKEE-FNLVLNAGFEIEFYLLKSVLRE--------------- 542 (840)
Q Consensus 481 ~Pw~~~~-a~v~~d~~~~-~g~p~~~~PR~~Lkr~~~~~~~~-~G~~~~~g~E~EF~l~~~~~~~--------------- 542 (840)
+||.++. +.|+|++++. +|+|++.|||++|||++++++++ +|+++++|+|+|||||++...+
T Consensus 89 ~Pw~~~~~~~v~~~~~d~~~g~P~~~~pR~iLk~~~~~~~~~g~~~~~~~g~E~EF~l~~~~~~~~~~~~~~~~~~~~~g 168 (486)
T 4acf_A 89 DPFRAAKTLNINFFVHDPFTLEPYSRDPRNIARKAENYLISTGIADTAYFGAEAEFYIFDSVSFDSRANGSFYEVDAISG 168 (486)
T ss_dssp CSSCSSCEEEEEEEEECTTTCCBCTTCHHHHHHHHHHHHHHHSSCSEEEEEEEECEEEESEEEEEECSSCEEEEEECTTB
T ss_pred CCcCCCccEEEEEEEeeCCCCCCCCCCchHHHHHHHHHHHHcCCcceecccceeEEEEeccccccccccCCcccCCcccc
Confidence 9999874 5688998874 89999999999999999999854 4668999999999999752100
Q ss_pred -----------CC--CCcccCCCCCcccCCccccchHHHHHHHHHHHhCCCceeeeccCCCC-CceEEecCcchHHHHHh
Q 003194 543 -----------GK--EEWVPIDFTPYCSTAAYDAVSPVFQEVLADLHSLNISVEQLHAEAGK-GQFEIALGHTVAAKAAD 608 (840)
Q Consensus 543 -----------~~--~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~l~~~Gi~ve~~h~E~gp-GQ~Ei~l~~~~~l~aaD 608 (840)
+. ..+.+.+..+||+..+.+...+++++|++.|+++||+|+++|+|+|| |||||++.|+++|+|||
T Consensus 169 ~~~~~~~~~~~g~p~~~~~~~~~~~y~~~~~~~~~~~~~~~i~~~l~~~Gi~ve~~h~E~gp~GQ~Ei~~~~~~~l~aAD 248 (486)
T 4acf_A 169 WWNTGAATEADGSPNRGYKVRHKGGYFPVAPNDQYVDLRDKMLTNLINSGFILEKGHHEVGSGGQAEINYQFNSLLHAAD 248 (486)
T ss_dssp GGGTTCSBCTTSCBCCCCCBCTTCCSSBCTTTSCCHHHHHHHHHHHHHTTCCEEEEEECSSTTTEEEEEECCEEHHHHHH
T ss_pred ccCCCCcccCCCCCCCCcccccCCccccCCcchhHHHHHHHHHHHHHhCCceEEeeeeeeeccceeEEeccCcchhhhhh
Confidence 00 01223345678888888999999999999999999999999999998 99999999999999999
Q ss_pred HHHHHHHHHHHHHHHcCCeeEecccccCCCCCcccccccccccCCCcccccCCCCCcCCCcHHHHHHHHHHHHhHHhhhh
Q 003194 609 NLIFTREVLRAVARKHGLLATFVPKFALDDIGSGSHVHLSLWQNGENVFMASDSSSKHGMSSVGEKFMAGVLHHLSSILA 688 (840)
Q Consensus 609 ~~~~~r~~ik~vA~~~Gl~ATFmpKP~~~~~GsG~H~H~Sl~~~g~n~f~~~d~~~~~~lS~~~~~fiaGlL~h~~al~a 688 (840)
+++++|++||+||++||+.|||||||+.+.+|||||+|+|||++|+|+|. +++++.+||+++++||||||+|++++++
T Consensus 249 ~~~~~k~~vk~vA~~~G~~aTFmpKP~~~~~GsG~H~H~Sl~~~g~n~f~--~~~~~~~lS~~~~~fiaGll~h~~~l~a 326 (486)
T 4acf_A 249 DMQLYKYIIKNTAWQNGKTVTFMPKPLFGDNGSGMHCHQSLWKDGAPLMY--DETGYAGLSDTARHYIGGLLHHAPSLLA 326 (486)
T ss_dssp HHHHHHHHHHHHHHHTTCEEECCSCSSTTSCCCCEEEEEEEEETTEESSB--CTTSGGGBCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCeEEEeeccccCCCcccceeeeeeccCCCcccc--ccccccccchHHHHHHHHHHHhhhccee
Confidence 99999999999999999999999999999999999999999999999999 6667889999999999999999999999
Q ss_pred hcCCCCCccccCCCCCccCccccccccCCCCcccccCCCCCCCCccceEEEcCCCCCCCHHHHHHHHHHHHHHhhhc-CC
Q 003194 689 FTAPVPNSYDRIQPNTWSGAYQCWGKENREAPLRTACPPGVKDGVVSNFELKSFDGCANPHLGLAAIIASGIDGLRR-LC 767 (840)
Q Consensus 689 ~~~Pt~nSY~Rl~~~~~ap~~~~WG~~NR~~~iRv~~~~~~~~~~~~~~E~R~~d~~aNPYLalAailaAGl~GI~~-l~ 767 (840)
|++||+||||||+||+|||++++||.+||+++||||...+ ....+|||+|++|++|||||++||+|+|||+||++ ++
T Consensus 327 ~~~PtvNSYkRl~pg~~AP~~~~wg~~NRsa~iRip~~~~--~~~~~riE~R~pd~~aNPYLalAailaAGldGI~~~l~ 404 (486)
T 4acf_A 327 FTNPTVNSYKRLVPGYEAPINLVYSQRNRSACVRIPITGS--NPKAKRLEFRSPDSSGNPYLAFSAMLMAGLDGIKNKIE 404 (486)
T ss_dssp HHSCSTTHHHHSSTTSSSCSBSCEEETCTTSSEEECCCTT--CTTTCCEEECCCCSSSCHHHHHHHHHHHHHHHHHTTCC
T ss_pred eecCCCcchhccCCCCcCCceeEEeccCCCcceEecccCC--CCccceeeecCCCCCCCHHHHHHHHHHHHHHHHHcCCC
Confidence 9999999999999999999999999999999999996322 23457999999999999999999999999999999 99
Q ss_pred CCCCCCCCcccccC----CCCCCCcCHHHHHHHHhcChHHHh---hhcHHHHHHHHHHHH-HHHHHHhcCCchHHH
Q 003194 768 LPEPIDANPASLDG----KLQRLPTSLSESVQALEKDDILRD---MIGEKLLIAIKGIRK-AEINYYSLNKDAYKQ 835 (840)
Q Consensus 768 ~~~~~~~~~~~~~~----~~~~LP~sl~eAl~~le~d~~l~~---~lG~~~v~~y~~~k~-~E~~~~~~~~~~~~~ 835 (840)
||+|+++|+++++. ++++||+||.|||++|++|..+++ +||++||++|+++|| .||++|...|++||.
T Consensus 405 p~~p~~~n~y~~~~~e~~~i~~LP~sL~eAl~~le~d~~~~~~~~v~g~~~v~~y~~~Kr~~E~~~~~~~vt~wE~ 480 (486)
T 4acf_A 405 PQAPVDKDLYELPPEEAASIPQTPTQLSDVIDRLEADHEYLTEGGVFTNDLIETWISFKRENEIEPVNIRPHPYEF 480 (486)
T ss_dssp CCCCCCSCGGGCCHHHHHTSCBCCSSHHHHHHHHHHCCHHHHGGGSSCHHHHHHHHHHHHHHTHHHHHTSCCHHHH
T ss_pred CCCccCCccccCCHHHHcCccccccCHHHHHHHHhcCHHHHHhhCcCCHHHHHHHHHHHHHHHHHHHHCCCCHHHH
Confidence 99999999997653 678999999999999999987653 699999999999997 699999999999985
No 5
>1f52_A Glutamine synthetase; ADP, MPD, ligase; HET: ADP; 2.49A {Salmonella typhimurium} SCOP: d.15.9.1 d.128.1.1 PDB: 1f1h_A* 1fpy_A* 1lgr_A* 2lgs_A* 2gls_A
Probab=100.00 E-value=2e-98 Score=856.95 Aligned_cols=415 Identities=25% Similarity=0.385 Sum_probs=373.4
Q ss_pred hccCCccEEEEEEecCCCCcceEEEechhhhhHHhhcccccccccc-cccccCCCCCCCCCCCCCCcEEEEEecCCceec
Q 003194 403 AFESDVSLIRVIWVDASGQHRCRVVPVKRFNDIVTKYGVGLTFACM-GMTSAVDGPADGTNLSGTGEIRLMPDLSTRWRI 481 (840)
Q Consensus 403 ~~~~~i~~v~l~~~D~~G~~R~k~vp~~~~~~~~~~~g~~~~~~~~-~~~~~~d~~~~~~~~~~~~d~~l~PD~~T~~~~ 481 (840)
+++.+|+||+++|+|+.|++|+|.||+++|.+.+.+.|++|++++. ++. -.+.+|++|+||++|++++
T Consensus 9 ~~~~~i~~v~~~~~D~~G~~r~k~vp~~~~~~~~~~~g~~fdgss~~g~~-----------~~~~sD~~l~PD~~T~~~~ 77 (468)
T 1f52_A 9 LNEHEVKFVDLRFTDTKGKEQHVTIPAHQVNAEFFEEGKMFDGSSIGGWK-----------GINESDMVLMPDASTAVID 77 (468)
T ss_dssp HHHTTCCEEEEEEECTTSCEEEEEEEGGGCCHHHHHHCEEEEGGGSTTSC-----------CSSCCEEEEEECGGGCEEC
T ss_pred HHhCCCCEEEEEEECCCCCEEEEEEEHHHHHHHHhhCceeeccccccccc-----------cCCCCCEEEEEecCCcEEc
Confidence 3455999999999999999999999999998844468999887653 221 1246799999999999999
Q ss_pred cCCc-cccceeeeccCC-CCCcCCCChHHHHHHHHHHHHHhcCc--eeeeeeeeEEEEEeecc----c----------CC
Q 003194 482 PWQK-QEEMIMADMHLK-PGEPWEYCPREALRKVSRLLKEEFNL--VLNAGFEIEFYLLKSVL----R----------EG 543 (840)
Q Consensus 482 Pw~~-~~a~v~~d~~~~-~g~p~~~~PR~~Lkr~~~~~~~~~G~--~~~~g~E~EF~l~~~~~----~----------~~ 543 (840)
||.+ ++++|+||++++ +|+|++.|||++|||++++++ ++|+ ++++|+|+|||||++.. . ++
T Consensus 78 Pw~~~~~~~v~~d~~~~~~G~p~~~~pR~ilk~~~~~l~-~~G~~~~~~~G~E~EFfl~~~~~~~~~~~~~~~~~~~~~~ 156 (468)
T 1f52_A 78 PFFADSTLIIRCDILEPGTLQGYDRDPRSIAKRAEDYLR-ATGIADTVLFGPEPEFFLFDDIRFGASISGSHVAIDDIEG 156 (468)
T ss_dssp SSCSSCEEEEEEEEECTTTCCCCTTCHHHHHHHHHHHHH-HHTSCSEEEEEEEEEEEEESEEEEEEETTEEEEEEECTTC
T ss_pred cccCCCceEEEEEEEeCCCCCcCCCCHHHHHHHHHHHHH-HcCCCcceEEEeeeEEEEEeccccccCCcccccccccccc
Confidence 9987 489999999999 799999999999999999998 5799 89999999999998631 0 00
Q ss_pred -----------CCCcccCCCCCcccCCccccchHHHHHHHHHHHhCCCceeeeccCCCCC-ceEEecCcchHHHHHhHHH
Q 003194 544 -----------KEEWVPIDFTPYCSTAAYDAVSPVFQEVLADLHSLNISVEQLHAEAGKG-QFEIALGHTVAAKAADNLI 611 (840)
Q Consensus 544 -----------~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~l~~~Gi~ve~~h~E~gpG-Q~Ei~l~~~~~l~aaD~~~ 611 (840)
.....|.++++||+..+.+...+++++|++.|+++||+||+.|+|+||| ||||++.|+++++|||+++
T Consensus 157 ~~~~~~~~~~~~~g~~~~~~~~Y~~~~~~~~~~~~~~~i~~~l~~~Gi~ve~~h~E~apggQ~Ei~~~~~~~l~aAD~~~ 236 (468)
T 1f52_A 157 AWNSSTKYEGGNKGHRPGVKGGYFPVPPVDSAQDIRSEMCLVMEQMGLVVEAHHHEVATAGQNEVATRFNTMTKKADEIQ 236 (468)
T ss_dssp GGGGGCCCTTCCCCCCCCTTCCSSBCTTSSCCHHHHHHHHHHHHHTTCCEEEEEECSSTTTEEEEEECCEEHHHHHHHHH
T ss_pred ccCCCccccccCCCCCCCCCCCccCCCccccHHHHHHHHHHHHHHCCCCeEEeecCCCCceeEEEeccCCCHHHHHHHHH
Confidence 0122455667898888889999999999999999999999999999996 9999999999999999999
Q ss_pred HHHHHHHHHHHHcCCeeEecccccCCCCCcccccccccccCCCcccccCCCCCcCCCcHHHHHHHHHHHHhHHhhhhhcC
Q 003194 612 FTREVLRAVARKHGLLATFVPKFALDDIGSGSHVHLSLWQNGENVFMASDSSSKHGMSSVGEKFMAGVLHHLSSILAFTA 691 (840)
Q Consensus 612 ~~r~~ik~vA~~~Gl~ATFmpKP~~~~~GsG~H~H~Sl~~~g~n~f~~~d~~~~~~lS~~~~~fiaGlL~h~~al~a~~~ 691 (840)
++|++||+||++||+.|||||||+.+.+|||||+|+|||++|+|+|. ++ +..+||+++++||||||+|++++++|++
T Consensus 237 ~~k~~vk~vA~~hGl~atFmpKP~~g~~GSG~H~h~Sl~~~g~Nlf~--~~-~~~~ls~~~~~~iaGll~h~~~l~a~~a 313 (468)
T 1f52_A 237 IYKYVVHNVAHRFGKTATFMPKPMFGDNGSGMHCHMSLAKNGTNLFS--GD-KYAGLSEQALYYIGGVIKHAKAINALAN 313 (468)
T ss_dssp HHHHHHHHHHHHTTCEEECCSCSSTTSCCCCEEEEEEEEETTEETTB--CS-SGGGBCHHHHHHHHHHHHTHHHHHHHHS
T ss_pred HHHHHHHHHHHHhCCEEEEeCCCCCCCCCCCcceeeccccCCCcccC--CC-CcchHHHHHHHHHHHHHHHHHHhHhHhc
Confidence 99999999999999999999999999999999999999999999997 33 4468999999999999999999999999
Q ss_pred CCCCccccCCCCCccCccccccccCCCCcccccCCCCCCCCccceEEEcCCCCCCCHHHHHHHHHHHHHHhhhc-CCCCC
Q 003194 692 PVPNSYDRIQPNTWSGAYQCWGKENREAPLRTACPPGVKDGVVSNFELKSFDGCANPHLGLAAIIASGIDGLRR-LCLPE 770 (840)
Q Consensus 692 Pt~nSY~Rl~~~~~ap~~~~WG~~NR~~~iRv~~~~~~~~~~~~~~E~R~~d~~aNPYLalAailaAGl~GI~~-l~~~~ 770 (840)
|++||||||+||+|||++++||.+||+++||||...+ +..+|||+|++|++|||||++||+|+|||+||++ ++|++
T Consensus 314 p~~NSYkRL~pg~eAP~~i~wg~~NRsa~iRiP~~~~---~~~~riE~R~pd~~aNPYLalaailaagL~GI~~~l~p~~ 390 (468)
T 1f52_A 314 PTTNSYKRLVPGYEAPVMLAYSARNRSASIRIPVVAS---PKARRIEVRFPDPAANPYLCFAALLMAGLDGIKNKIHPGE 390 (468)
T ss_dssp CSGGGGGTSSSCSSCCCEEEEESSCTTEEEECCCCSC---GGGCCEEECCCCTTSCHHHHHHHHHHHHHHHHHTTCCCCS
T ss_pred CCccchhccCCCCcCcCcceeccCCcccceeeCCCCC---CCCCEEEeCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCC
Confidence 9999999999999999999999999999999995211 2457999999999999999999999999999999 99999
Q ss_pred CCCCCcccccC----CCCCCCcCHHHHHHHHhcC-hHHH--hhhcHHHHHHHHHHHHHHHHHHhcCCchHHH
Q 003194 771 PIDANPASLDG----KLQRLPTSLSESVQALEKD-DILR--DMIGEKLLIAIKGIRKAEINYYSLNKDAYKQ 835 (840)
Q Consensus 771 ~~~~~~~~~~~----~~~~LP~sl~eAl~~le~d-~~l~--~~lG~~~v~~y~~~k~~E~~~~~~~~~~~~~ 835 (840)
|+++|+++++. ++++||+||.|||++|++| .+++ ++||++++++|+++|+.||++|...+++|+.
T Consensus 391 ~~~~~~~~~~~~e~~~~~~LP~sL~eAl~~l~~~~~~~~~~~~lg~~~~~~~~~~k~~E~~~~~~~vt~wE~ 462 (468)
T 1f52_A 391 PMDKNLYDLPPEEAKEIPQVAGSLEEALNALDLDREFLKAGGVFTDEAIDAYIALRREEDDRVRMTPHPVEF 462 (468)
T ss_dssp CCCSCCSSSCCSSTTCCCBCCSSHHHHHHHHHHTCHHHHGGGSSCHHHHHHHHHHHHHHHHHHHHSCCHHHH
T ss_pred CcCcChhhcCHHHHhCcCCCCCCHHHHHHHHhcCHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHcCCCHHHH
Confidence 99999987643 5788999999999999999 5677 9999999999999999999999999999876
No 6
>2j9i_A Glutamate-ammonia ligase domain-containing protein 1; 17.00A {Mus musculus}
Probab=100.00 E-value=4.4e-91 Score=784.75 Aligned_cols=392 Identities=23% Similarity=0.279 Sum_probs=343.2
Q ss_pred hccCCccEEEEEEecCCCCcceEEEechhhhhHHhhcccccccccccccccCCCCCCCCCCCC-CCcEEEEEecCCceec
Q 003194 403 AFESDVSLIRVIWVDASGQHRCRVVPVKRFNDIVTKYGVGLTFACMGMTSAVDGPADGTNLSG-TGEIRLMPDLSTRWRI 481 (840)
Q Consensus 403 ~~~~~i~~v~l~~~D~~G~~R~k~vp~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~~~~~~~~-~~d~~l~PD~~T~~~~ 481 (840)
+++.+|+||+++|+|++|++|+|+||+++|.+ + .+|++|++++ . ..+. ...+ .+|++|+||++|++++
T Consensus 9 l~~~~i~~v~~~~~D~~G~~r~k~ip~~~~~~-~-~~g~~~~gs~-~----~~~~----~~~~~~sD~~l~PD~~T~~~~ 77 (421)
T 2j9i_A 9 LNEHAAAFVRFEATDAAGASRSKSIPAQFFEK-V-IHARGYLEDG-E----VNAG----AAGAAASDIVLMPELSTAAVA 77 (421)
T ss_dssp HHHTTCSEEEEEEECSSSCEEEEEEEGGGCCT-T-HHHHCEEECG-G----GSTT----TCCTTCCCEEEEECSSCCEEC
T ss_pred HHhCCCCEEEEEEECCCCCEEEEEEEHHHHHH-h-hcCCeeeccc-C----cccc----cccCCCCCEEEEEecCceEEc
Confidence 34559999999999999999999999999944 3 3567776632 0 0110 0022 3799999999999999
Q ss_pred cC-CccccceeeeccCCCCCcCCCChHHHHHHHHHHHHHhcCc--eeeeeeeeEEEEEeecccCCCCCcccCCCCCcccC
Q 003194 482 PW-QKQEEMIMADMHLKPGEPWEYCPREALRKVSRLLKEEFNL--VLNAGFEIEFYLLKSVLREGKEEWVPIDFTPYCST 558 (840)
Q Consensus 482 Pw-~~~~a~v~~d~~~~~g~p~~~~PR~~Lkr~~~~~~~~~G~--~~~~g~E~EF~l~~~~~~~~~~~~~p~~~~~~~~~ 558 (840)
|| .+++++|+|| ||+|++.|||++|||++++++ ++|+ ++++|+|+|||||++... +. ...+||+.
T Consensus 78 Pw~~~~~a~v~cd----dG~P~~~~pR~iLk~~~~~~~-~~G~~d~~~~g~E~EF~l~~~~~~---~~----~~p~y~~~ 145 (421)
T 2j9i_A 78 AAAAAATAAVICD----GGAAAAASPRYIARAALAQLQ-AAGAAAGLLSAFIADFCIFGVPEV---IN----SKTISFPA 145 (421)
T ss_dssp TTSSSSEEEEEEE----EESSCSCCHHHHHHHHHHHHH-HTTSCSEECCEECCCCEEESCCEE---EE----CSSCEEEE
T ss_pred CcCCCCeEEEEcC----CCCCCCCChHHHHHHHHHHHH-hcCCccCceEEeeeEEEEEecCCC---CC----CCCCcCCC
Confidence 99 7889999999 799999999999999999998 5899 999999999999986311 00 11246666
Q ss_pred CccccchHHHHHHHHHHHhCCCceeeeccCCCCCceEEecCcch-HHHHHhHHHHHHHHHHHHHHHcCCeeEecccccCC
Q 003194 559 AAYDAVSPVFQEVLADLHSLNISVEQLHAEAGKGQFEIALGHTV-AAKAADNLIFTREVLRAVARKHGLLATFVPKFALD 637 (840)
Q Consensus 559 ~~~~~~~~~~~~i~~~l~~~Gi~ve~~h~E~gpGQ~Ei~l~~~~-~l~aaD~~~~~r~~ik~vA~~~Gl~ATFmpKP~~~ 637 (840)
.+.+...+++++|++.|+ +||+|++.|+|+|||||||++.|++ ++++||+++++|++||+||++||+.||||||| +
T Consensus 146 ~~~~~~~~~~~~i~~~l~-~Gi~ve~~h~E~apgQ~Ei~~~~~~~~l~aaD~~~~~k~~vk~vA~~~G~~atFmpKP--~ 222 (421)
T 2j9i_A 146 STTAAAADQPQEAAAGGA-AGAAAGAAGGAAAAGAAEICFLPEAAGAAAADNAFTLRTGLQEVARRYNAIASAAAAA--A 222 (421)
T ss_dssp CCCTTCTTGGGSCCTTCC-CSCCCBTTBCCCCCSSCCTTTTTTTCCSCTTTHHHHHHHHHHHHHHTTTCEEECCTTS--S
T ss_pred CcccchhHHHHHHHHHHh-CCCCeEEeecCCCCCcEEEecCCCChHHHHHHHHHHHHHHHHHHHHHhCCEEEEcCCc--C
Confidence 666778889999999999 9999999999999999999999999 99999999999999999999999999999999 8
Q ss_pred CCCccccccccccc---CCCcccccCCCCCcCCCcHHHHHHHHHHHHhHHhhhhhcCCCCCccccCCCCCccCccc---c
Q 003194 638 DIGSGSHVHLSLWQ---NGENVFMASDSSSKHGMSSVGEKFMAGVLHHLSSILAFTAPVPNSYDRIQPNTWSGAYQ---C 711 (840)
Q Consensus 638 ~~GsG~H~H~Sl~~---~g~n~f~~~d~~~~~~lS~~~~~fiaGlL~h~~al~a~~~Pt~nSY~Rl~~~~~ap~~~---~ 711 (840)
.+|||| +|+|||+ +|+|+|. +++++ +||+++++||||||+|++++++|++|++||||| +.|||.++ +
T Consensus 223 ~~GSG~-~h~Sl~~~~~~G~nlf~--~~~~~-~ls~~~~~~iaGil~h~~~l~a~~~p~~NSYk~---~~~ap~~~~~~~ 295 (421)
T 2j9i_A 223 AAAAGA-GSHSIWDVGAAGTNAFA--GASGA-RATLTGAKWLAGLLAAAAAAAAAAAAAAAAAAA---AAAGAAAAAATA 295 (421)
T ss_dssp TTSCCC-BCCEEECEEETTEESSC--SSSGG-GCCHHHHHHHHHHHHHHHHHHHHHTCSHHHHHH---TSSSTTCCCEEE
T ss_pred CCCCce-EEEeccccCCCCceeec--CCCCc-cccHHHHHHHHHHHHHHHHHHHHhCCCccccCC---CCCCCcCeeeee
Confidence 899999 9999996 6899998 44444 899999999999999999999999999999994 67888777 9
Q ss_pred ccccCCCCcccccCCCCCCCCccceEEEcCCCCCCCHHHHHHHHHHHHHHhhhc-CCCCCCCCCCcccccCCCCCCCcCH
Q 003194 712 WGKENREAPLRTACPPGVKDGVVSNFELKSFDGCANPHLGLAAIIASGIDGLRR-LCLPEPIDANPASLDGKLQRLPTSL 790 (840)
Q Consensus 712 WG~~NR~~~iRv~~~~~~~~~~~~~~E~R~~d~~aNPYLalAailaAGl~GI~~-l~~~~~~~~~~~~~~~~~~~LP~sl 790 (840)
||.+||+++||||.. ..+..+|||+|++|++|||||++||+|+||++||++ ++||+|+++|++++ ..++||+||
T Consensus 296 wG~~NRsa~iRip~~---~~~~~~riE~R~pd~~aNPYLa~aailaagl~GI~~~l~~p~~~~~~~~~~--~~~~LP~sL 370 (421)
T 2j9i_A 296 WGAAAAACALNIAAA---AAAKGAQIENKAGAAAANPYLVLAATVAAGLDGIQSAGAAAGAAAADAAAA--APSEIPGKM 370 (421)
T ss_dssp EESSCTTEEEEEECC---SSGGGCEEEECSCBTTSCHHHHHHHHHHHHHHHHHHTCCCCSCBCSSSSCS--SCCCCCSSH
T ss_pred eecCCCccceeeccc---CCCCCCEEEEcCCCCCCChHHHHHHHHHHHhhhhhhccCCCCCCCcchhhc--CcccCCCCH
Confidence 999999999999963 112457999999999999999999999999999999 99989999998743 467899999
Q ss_pred HHHHHHHhcC-hHHHhhhcHHHHHHHHHHHHHHHHHHhcCCchHHH
Q 003194 791 SESVQALEKD-DILRDMIGEKLLIAIKGIRKAEINYYSLNKDAYKQ 835 (840)
Q Consensus 791 ~eAl~~le~d-~~l~~~lG~~~v~~y~~~k~~E~~~~~~~~~~~~~ 835 (840)
.|||++|++| ++++++||++|+++|+++||.||++ .+++|+.
T Consensus 371 ~eAl~~l~~d~~~l~~~lG~~~~~~y~~~K~~E~~~---~vt~wE~ 413 (421)
T 2j9i_A 371 EDALAALEQDAECLKAGLGEAFIRAAVAAAKYELEN---EETDAEG 413 (421)
T ss_dssp HHHHHHHTTCCSSSSCSCCCHHHHHHHHHHHHHHHH---HHHHHHH
T ss_pred HHHHHHHHhCHHHHHHHcCHHHHHHHHHHHHHHHHh---cCCHHHH
Confidence 9999999999 9999999999999999999999998 5777654
No 7
>3fky_A Glutamine synthetase; beta-grAsp, catalytic domain, acetylation, cytoplasm, ligase, UBL conjugation; HET: FLC; 2.95A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.8e-78 Score=670.76 Aligned_cols=331 Identities=17% Similarity=0.200 Sum_probs=271.8
Q ss_pred hccCCccEEEEEEecCCCCcceEEEechhhhhHHhh-cccccccccccccccCCCCCCCCCCCCCCcEEEEEecCCceec
Q 003194 403 AFESDVSLIRVIWVDASGQHRCRVVPVKRFNDIVTK-YGVGLTFACMGMTSAVDGPADGTNLSGTGEIRLMPDLSTRWRI 481 (840)
Q Consensus 403 ~~~~~i~~v~l~~~D~~G~~R~k~vp~~~~~~~~~~-~g~~~~~~~~~~~~~~d~~~~~~~~~~~~d~~l~PD~~T~~~~ 481 (840)
..+.+|++|+++|+|++|++|||++|++.|.+.+.+ .+++|++++.++. ..+.+|++|+|| |++++
T Consensus 18 l~~~~i~~v~~~~~D~~G~lR~K~~~~~~~~~~~~~~~~~~fDGss~g~~-----------~~~~sD~~l~Pd--t~~~~ 84 (370)
T 3fky_A 18 LDQRGRIIAEYVWIDGTGNLRSKGRTLKKRITSIDQLPEWNFDGSSTNQA-----------PGHDSDIYLKPV--AYYPD 84 (370)
T ss_dssp ---CCCEEEEEEEECSSSCEEEEEEEESSCCCSGGGSCCEEECGGGTTSS-----------CCCC--EEEEEE--EEEEC
T ss_pred cccCCeEEEEEEEEcCCCCeEEEEEECccccchHHhCCccccCCcccccc-----------cCCCCCeeEeee--EEEEc
Confidence 345789999999999999999999999988765422 3677777765432 134689999999 89999
Q ss_pred cCCcc-ccceeeeccCCCCCcCCCChHHHHHHHHHHHHHhcCceeeeeeeeEEEEEeeccc-CCCC-CcccCCCCCcccC
Q 003194 482 PWQKQ-EEMIMADMHLKPGEPWEYCPREALRKVSRLLKEEFNLVLNAGFEIEFYLLKSVLR-EGKE-EWVPIDFTPYCST 558 (840)
Q Consensus 482 Pw~~~-~a~v~~d~~~~~g~p~~~~PR~~Lkr~~~~~~~~~G~~~~~g~E~EF~l~~~~~~-~~~~-~~~p~~~~~~~~~ 558 (840)
||.++ +++|+||++++||+|++.|||++|||++++++ |+++++|+|+|||||+.... .+.+ ...|.++++||+.
T Consensus 85 Pw~~~~~a~vlcd~~~~dG~P~~~~pR~iLkr~~~~~~---g~~~~~G~E~EF~Lf~~~~~~~~~p~~~~p~~~g~yy~~ 161 (370)
T 3fky_A 85 PFRRGDNIVVLAACYNNDGTPNKFNHRHEAAKLFAAHK---DEEIWFGLEQEYTLFDMYDDVYGWPKGGYPAPQGPYYCG 161 (370)
T ss_dssp TTTCTTCEEEEEEEECTTSSBCTTCCHHHHHHHHHHTG---GGCCEEEEEEEEEEECTTSSBTTCCTTSBCSCSSSCTTC
T ss_pred CCCCCCeEEEEEEEEcCCCCCCCCCHHHHHHHHHHHhc---CCCceEEeeeEEEEEccCCCcccCCCCCccCCCCccccc
Confidence 99986 89999999999999999999999999999874 89999999999999986311 1111 1246677888765
Q ss_pred Ccccc--chHHHHHHHHHHHhCCCceeeeccCCCCCceEEecCcchHHHHHhHHHHHHHHHHHHHHHcCCeeEecccccC
Q 003194 559 AAYDA--VSPVFQEVLADLHSLNISVEQLHAEAGKGQFEIALGHTVAAKAADNLIFTREVLRAVARKHGLLATFVPKFAL 636 (840)
Q Consensus 559 ~~~~~--~~~~~~~i~~~l~~~Gi~ve~~h~E~gpGQ~Ei~l~~~~~l~aaD~~~~~r~~ik~vA~~~Gl~ATFmpKP~~ 636 (840)
.+... .++++++|+++|+++||+||++|+|+|||||||++.|+++|++||+++++|++||+||++||+.|||||||+.
T Consensus 162 ~~~~~~~~~~i~~~i~~~l~~~Gi~ve~~h~E~~pGQ~Ei~~~~~~~l~aAD~~~~~K~~vk~vA~~~G~~ATFmpKP~~ 241 (370)
T 3fky_A 162 VGAGKVYARDMIEAHYRACLYAGLEISGINAEVMPSQWEFQVGPCTGIDMGDQLWMARYFLHRVAEEFGIKISFHPKPLK 241 (370)
T ss_dssp CSTTTCSCHHHHHHHHHHHHHHTCCEEEEEECSSTTEEEEEEEEEETHHHHHHHHHHHHHHHHHHHTTTCEEECCSCSSS
T ss_pred cchhhHHHHHHHHHHHHHHHHcCCCeeeeecCcCCCceEEecCCCCHHHHHHHHHHHHHHHHHHHHHhCcEEEEcccccC
Confidence 54333 6899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred -CCCCcccccccccccCCCcccccCCCCCcCCCcHHHHHHHHHHH-HhHHhhhhhcCCCCCccccCCCCCccCcc--ccc
Q 003194 637 -DDIGSGSHVHLSLWQNGENVFMASDSSSKHGMSSVGEKFMAGVL-HHLSSILAFTAPVPNSYDRIQPNTWSGAY--QCW 712 (840)
Q Consensus 637 -~~~GsG~H~H~Sl~~~g~n~f~~~d~~~~~~lS~~~~~fiaGlL-~h~~al~a~~~Pt~nSY~Rl~~~~~ap~~--~~W 712 (840)
+.+|||||+|+|||+.. + +.+++. .++||+||+ +|+++|++|+ +||||||+|++|||++ ++|
T Consensus 242 gd~~GSG~H~H~Sl~~~~-------~---~~g~~~-~~~~i~gl~~~h~~~i~a~~---~nSYkRL~~~~eap~~~~~sW 307 (370)
T 3fky_A 242 GDWNGAGCHANVSTKEMR-------Q---PGGTKY-IEQAIEKLSKRHAEHIKLYG---SDNDMRLTGRHETASMTAFSS 307 (370)
T ss_dssp SSSCCCBEEEEEECHHHH-------S---SSTHHH-HHHHHHHHHHTHHHHHHSSC---TTGGGC--------CCSCCCE
T ss_pred CCCCcccceeeecccccc-------C---CCCHHH-HHHHHHHHHHHhHHHHHHHc---cchhhhcCCCccCCCcccceE
Confidence 47999999999999621 1 123444 489999999 9999999996 6999999999999974 899
Q ss_pred cccCCCCcccccCCCCCCCCccceEEEcCCCCCCCHHHHHHHHHHHHHHhhhc
Q 003194 713 GKENREAPLRTACPPGVKDGVVSNFELKSFDGCANPHLGLAAIIASGIDGLRR 765 (840)
Q Consensus 713 G~~NR~~~iRv~~~~~~~~~~~~~~E~R~~d~~aNPYLalAailaAGl~GI~~ 765 (840)
|.+||+++||||...+. ...+|||+|+||++|||||++||||+||++||++
T Consensus 308 G~~NRsa~iRIp~~~~~--~~~~riE~R~pda~aNPYLa~Aailaagl~Gi~~ 358 (370)
T 3fky_A 308 GVANRGSSIRIPRSVAK--EGYGYFEDRRPASNIDPYLVTGIMCETVCGAIDN 358 (370)
T ss_dssp EESCTTSSEEECHHHHH--HTCCCEEECCCBTTCCHHHHHHHHHHHHHCCBTT
T ss_pred ecCCCceeEEecCCCCC--CCCCEEEECCCCCCCCHHHHHHHHHHHHhcCccc
Confidence 99999999999962211 1135999999999999999999999999999986
No 8
>2ojw_A Glutamine synthetase; amino-acid biosynthesis, ligase, structural GENO structural genomics consortium, SGC; HET: ADP; 2.05A {Homo sapiens} PDB: 2qc8_A* 2uu7_A
Probab=100.00 E-value=4.1e-77 Score=663.00 Aligned_cols=331 Identities=19% Similarity=0.223 Sum_probs=276.7
Q ss_pred hhhhhhccC-CccEEEEEEecCCC-CcceEEEechhhhhHHhhc--ccccccccccccccCCCCCCCCCCCCCCcEEEEE
Q 003194 398 LKKSDAFES-DVSLIRVIWVDASG-QHRCRVVPVKRFNDIVTKY--GVGLTFACMGMTSAVDGPADGTNLSGTGEIRLMP 473 (840)
Q Consensus 398 ~~~~~~~~~-~i~~v~l~~~D~~G-~~R~k~vp~~~~~~~~~~~--g~~~~~~~~~~~~~~d~~~~~~~~~~~~d~~l~P 473 (840)
+..|+..++ ++.+|+++|+|++| ++|+|.+|+++|.+.+ +. |++|+++++++. ..+.+|++|+|
T Consensus 33 l~~~l~~~~~~~~~v~~~~~D~~G~~~R~K~ip~~~~~~~~-~~~p~~~~dgss~~~~-----------~~~~sD~~l~P 100 (384)
T 2ojw_A 33 KQVYMSLPQGEKVQAMYIWIDGTGEGLRCKTRTLDSEPKCV-EELPEWNFDGSSTLQS-----------EGSNSDMYLVP 100 (384)
T ss_dssp HHHHHTSCCCSCEEEEEEEECTTSSCEEEEEEEESSCCSSG-GGSCCEEEEGGGTTSS-----------BTTBCEEEEEE
T ss_pred HHHHHhCCCCCcEEEEEEEECCCCCeeeEEEEEHHHhhhhH-hhCccccccCcccccc-----------cCCCCcEEEEe
Confidence 566777665 59999999999999 9999999999998754 44 677776554321 23568999999
Q ss_pred ecCCceeccCCc-cccceeeeccCCCCCcCCCChHHHHHHHHHHHHHhcCceeeeeeeeEEEEEeecccC-CCCC-cccC
Q 003194 474 DLSTRWRIPWQK-QEEMIMADMHLKPGEPWEYCPREALRKVSRLLKEEFNLVLNAGFEIEFYLLKSVLRE-GKEE-WVPI 550 (840)
Q Consensus 474 D~~T~~~~Pw~~-~~a~v~~d~~~~~g~p~~~~PR~~Lkr~~~~~~~~~G~~~~~g~E~EF~l~~~~~~~-~~~~-~~p~ 550 (840)
| |++++||.+ ++++|+||++++||+|++.|||++|||++++++ |+++++|+|+|||||++.... +.+. ..|.
T Consensus 101 D--t~~~~Pw~~~~~a~v~cd~~~~dG~P~~~~pR~iLkr~~~~~~---g~~~~~G~E~EF~Lf~~~~~~~~~~~~g~p~ 175 (384)
T 2ojw_A 101 A--AMFRDPFRKDPNKLVLCEVFKYNRRPAETNLRHTCKRIMDMVS---NQHPWFGMEQEYTLMGTDGHPFGWPSNGFPG 175 (384)
T ss_dssp E--EEEECTTTCTTCEEEEEEEECTTSCBCTTCCHHHHHHHHHHTG---GGCCEEEEEEEEEEEC-CCSBTTCCTTSCCS
T ss_pred e--EEEECCCCCCCeEEEEEEEECCCCCCCCcCHHHHHHHHHHHHh---CCEEEEEeeeEEEEEccCCCcccccCCCccC
Confidence 9 899999986 589999999999999999999999999999986 799999999999999873211 2111 1355
Q ss_pred CCCCcccCCccc--cchHHHHHHHHHHHhCCCceeeeccCCCCCceEEecCcchHHHHHhHHHHHHHHHHHHHHHcCCee
Q 003194 551 DFTPYCSTAAYD--AVSPVFQEVLADLHSLNISVEQLHAEAGKGQFEIALGHTVAAKAADNLIFTREVLRAVARKHGLLA 628 (840)
Q Consensus 551 ~~~~~~~~~~~~--~~~~~~~~i~~~l~~~Gi~ve~~h~E~gpGQ~Ei~l~~~~~l~aaD~~~~~r~~ik~vA~~~Gl~A 628 (840)
++++||+....+ ..++++++|+++|+++||+||++|+|+|||||||+++|+++|++||+++++|++||+||++||+.|
T Consensus 176 ~~g~y~~~~~~~~~~~~~~~~~i~~~l~~~Gi~ve~~h~E~~pgQ~Ei~~~~~~~l~aAD~~~~~k~~vk~vA~~~Gl~a 255 (384)
T 2ojw_A 176 PQGPYYCGVGADRAYGRDIVEAHYRACLYAGVKIAGTNAEVMPAQWEFQIGPCEGISMGDHLWVARFILHRVCEDFGVIA 255 (384)
T ss_dssp CSSSCTTCCSTTTCCCHHHHHHHHHHHHHHTCCEEEEEECSSTTEEEEEEEEEETTHHHHHHHHHHHHHHHHHHHHTCEE
T ss_pred CCCCCCcccccchHHHHHHHHHHHHHHHHCCCCeEeeecCCCCcceEEEcCCCcHHHHHHHHHHHHHHHHHHHHHhCCEE
Confidence 677888766655 367999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EecccccCC-CCCccccccccccc--C--CCcccccCCCCCcCCCcHHHHHHHHHH-HHhHHhhhhh-cCCCCCccccCC
Q 003194 629 TFVPKFALD-DIGSGSHVHLSLWQ--N--GENVFMASDSSSKHGMSSVGEKFMAGV-LHHLSSILAF-TAPVPNSYDRIQ 701 (840)
Q Consensus 629 TFmpKP~~~-~~GsG~H~H~Sl~~--~--g~n~f~~~d~~~~~~lS~~~~~fiaGl-L~h~~al~a~-~~Pt~nSY~Rl~ 701 (840)
||||||+.+ .+|||||+|+||++ + |.| ..+++++|+ ++|++++++| .+|++||||||+
T Consensus 256 TFmpKP~~~d~~GSG~H~H~Sl~~~~~~~g~n---------------~f~~~~~gl~~~h~~~i~a~~p~~~~nsykRL~ 320 (384)
T 2ojw_A 256 TFDPKPIPGNWNGAGCHTNFSTKAMREENGLK---------------YIEEAIEKLSKRHQYHIRAYDPKGGLDNARRLT 320 (384)
T ss_dssp ECCSCSSCSSSCCCBEEEEEECHHHHSTTTHH---------------HHHHHHHHHHTCHHHHHHHSSTTTTTTGGGTCC
T ss_pred EEeccccCCCCCCCeeeEEeehhhhcCCCchh---------------HHHHHHHHHHHHHHHHheEeccCCCCCchhhcc
Confidence 999999977 69999999999974 1 223 346799999 8999999999 344599999999
Q ss_pred CCCccCc--cccccccCCCCcccccCCCCCCCCccceEEEcCCCCCCCHHHHHHHHHHHHHHh
Q 003194 702 PNTWSGA--YQCWGKENREAPLRTACPPGVKDGVVSNFELKSFDGCANPHLGLAAIIASGIDG 762 (840)
Q Consensus 702 ~~~~ap~--~~~WG~~NR~~~iRv~~~~~~~~~~~~~~E~R~~d~~aNPYLalAailaAGl~G 762 (840)
|++|||+ +++||.+||+++||||...+. .+.+|||+|+||++|||||++||+|+||+.+
T Consensus 321 pg~ea~~~~~~sWG~~NRsa~iRIp~~~~~--~~~~riE~R~pd~~aNPYLa~Aailaagl~~ 381 (384)
T 2ojw_A 321 GFHETSNINDFSAGVANRSASIRIPRTVGQ--EKKGYFEDRRPSANCDPFSVTEALIRTCLLN 381 (384)
T ss_dssp -----CCTTCCCEEETCTTSSEEECHHHHH--HTCSCEEECCCBTTCCHHHHHHHHHHHHTSC
T ss_pred CCcccCCCceEEeecccCCceEEeecCCCC--CCCCEEEEcCCCCCCCHHHHHHHHHHHhcCC
Confidence 9999886 899999999999999952111 1246999999999999999999999999965
No 9
>2d3a_A Glutamine synthetase; ligase; HET: P3S ADP; 2.63A {Zea mays} PDB: 2d3b_A* 2d3c_A*
Probab=100.00 E-value=3.3e-75 Score=642.19 Aligned_cols=324 Identities=20% Similarity=0.228 Sum_probs=275.3
Q ss_pred cCCccEEEEEEecCCC-CcceEEEechhhhhHHhhc--ccccccccccccccCCCCCCCCCCCCCCcEEEEEecCCceec
Q 003194 405 ESDVSLIRVIWVDASG-QHRCRVVPVKRFNDIVTKY--GVGLTFACMGMTSAVDGPADGTNLSGTGEIRLMPDLSTRWRI 481 (840)
Q Consensus 405 ~~~i~~v~l~~~D~~G-~~R~k~vp~~~~~~~~~~~--g~~~~~~~~~~~~~~d~~~~~~~~~~~~d~~l~PD~~T~~~~ 481 (840)
..++.+|+++|+|+.| .+|||.+|++.+.+.+ +. |++|+++++++. .+..+|++|+|| |++++
T Consensus 15 ~~~~~~v~~~~vD~~g~~~r~k~~~~~~~~~~~-~~~~g~~fdgss~~~~-----------~~~~sD~~l~PD--t~~~~ 80 (356)
T 2d3a_A 15 TTEKIIAEYIWIGGSGMDLRSKARTLPGPVTDP-SKLPKWNYDGSSTGQA-----------PGEDSEVILYPQ--AIFKD 80 (356)
T ss_dssp TCSCEEEEEEEECTTSSCEEEEEEEESSCCCCG-GGSCCEEEEGGGTTSS-----------CSSSCEEEEEEE--EEEEC
T ss_pred CCCeEEEEEEEEcCCCCcccceEEECCcchhhH-hhcCcceecccccccc-----------cCcCCcEEEEEE--EEEEC
Confidence 5678999999999999 9999999999887754 44 888888775432 123679999999 89999
Q ss_pred cCCc-cccceeeeccCCCCCcCCCChHHHHHHHHHHHHHhcCceeeeeeeeEEEEEeecccC--CCC-CcccCCCCCccc
Q 003194 482 PWQK-QEEMIMADMHLKPGEPWEYCPREALRKVSRLLKEEFNLVLNAGFEIEFYLLKSVLRE--GKE-EWVPIDFTPYCS 557 (840)
Q Consensus 482 Pw~~-~~a~v~~d~~~~~g~p~~~~PR~~Lkr~~~~~~~~~G~~~~~g~E~EF~l~~~~~~~--~~~-~~~p~~~~~~~~ 557 (840)
||.+ ++++|+||++++||+|++.|||++|||+++++++ .|+++++|+|+|||||++.... +.+ .-.|.++++||+
T Consensus 81 P~~~~~~a~v~cd~~~~dG~P~~~~pR~iLkr~~~~~~~-~g~~~~~G~E~EF~lf~~~~~~~~~~~~~g~p~~~g~y~~ 159 (356)
T 2d3a_A 81 PFRRGNNILVMCDCYTPAGEPIPTNKRYSAAKIFSSPEV-AAEEPWYGIEQEYTLLQKDTNWPLGWPIGGFPGPQGPYYC 159 (356)
T ss_dssp TTTCTTCEEEEEEEECTTSCBCTTCCHHHHHHHHHSHHH-HHHCCEEEEEEEEEEEETTTCCBTTSCTTSBCSCSSSCTT
T ss_pred CcCCCCceEEEEEEECCCCCCCCCCHHHHHHHHHHHHHh-cCCeeEEecceEEEEEecCCCcccccccCCCCCCCCCcCc
Confidence 9986 5899999999999999999999999999999984 7999999999999999863110 000 013446678887
Q ss_pred CCcccc--chHHHHHHHHHHHhCCCceeeeccCCCCCceEEecCcchHHHHHhHHHHHHHHHHHHHHHcCCeeEeccccc
Q 003194 558 TAAYDA--VSPVFQEVLADLHSLNISVEQLHAEAGKGQFEIALGHTVAAKAADNLIFTREVLRAVARKHGLLATFVPKFA 635 (840)
Q Consensus 558 ~~~~~~--~~~~~~~i~~~l~~~Gi~ve~~h~E~gpGQ~Ei~l~~~~~l~aaD~~~~~r~~ik~vA~~~Gl~ATFmpKP~ 635 (840)
..+.+. .++++++|++.|+++||+||++|+|+|||||||+++|+++|++||+++++|++||+||++||+.|||||||+
T Consensus 160 ~~~~~~~~~~~~~~~i~~~l~~~Gi~ve~~h~E~~pgQ~Ei~~~~~~~l~aAD~~~~~k~~vk~vA~~~G~~aTFmpKP~ 239 (356)
T 2d3a_A 160 GIGAEKSFGRDIVDAHYKACLYAGINISGINGEVMPGQWEFQVGPSVGISSGDQVWVARYILERITEIAGVVVTFDPKPI 239 (356)
T ss_dssp CCSTTTCCCHHHHHHHHHHHHHHTCCEEEEEECSSTTEEEEEEEEEETHHHHHHHHHHHHHHHHHHHHHTEEEECCSCSS
T ss_pred CcccchHHHHHHHHHHHHHHHHCCCCEEEeecCcCCCceEEecCCCCHHHHHHHHHHHHHHHHHHHHHhCCEEEECCCcc
Confidence 776664 689999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred C-CCCCccccccccccc----CCCcccccCCCCCcCCCcHHHHHHHHHHHHhHHhhhhhcCCCCCccccCCCCCccCc--
Q 003194 636 L-DDIGSGSHVHLSLWQ----NGENVFMASDSSSKHGMSSVGEKFMAGVLHHLSSILAFTAPVPNSYDRIQPNTWSGA-- 708 (840)
Q Consensus 636 ~-~~~GsG~H~H~Sl~~----~g~n~f~~~d~~~~~~lS~~~~~fiaGlL~h~~al~a~~~Pt~nSY~Rl~~~~~ap~-- 708 (840)
. +.+|||||+|+|||+ +|.|+|. . ..-+++++|++++++| ++||||||+||+|||.
T Consensus 240 ~~d~~GSG~H~H~Sl~~~~~~~g~~~f~-----------~---~~~~l~l~h~~~l~a~---~~nSYkRL~pg~eap~~~ 302 (356)
T 2d3a_A 240 PGDWNGAGAHTNYSTESMRKEGGYEVIK-----------A---AIEKLKLRHKEHIAAY---GEGNERRLTGRHETADIN 302 (356)
T ss_dssp CSSSCCCBEEEEEECTTTSSTTHHHHHH-----------H---HHHHHHHTHHHHHTTS---CTTHHHHCSSSSSCCCTT
T ss_pred CCCCCCCcceEEechhhhccCCCHHHHH-----------H---HHHHHHHHHHHHHHhH---ccChHHHccCCccCCCcc
Confidence 6 789999999999964 2446554 1 1113479999999999 3599999999999986
Q ss_pred cccccccCCCCcccccCCCCCCCCccceEEEcCCCCCCCHHHHHHHHHHHHHHh
Q 003194 709 YQCWGKENREAPLRTACPPGVKDGVVSNFELKSFDGCANPHLGLAAIIASGIDG 762 (840)
Q Consensus 709 ~~~WG~~NR~~~iRv~~~~~~~~~~~~~~E~R~~d~~aNPYLalAailaAGl~G 762 (840)
+++||.+||+++||||..... .+.+|||+|+||++|||||++||+|+||+.+
T Consensus 303 ~~swG~~NRsa~iRIp~~~~~--~~~~riE~R~pd~~aNPYLa~Aailaagl~~ 354 (356)
T 2d3a_A 303 TFSWGVANRGASVRVGRETEQ--NGKGYFEDRRPASNMDPYVVTSMIAETTIVW 354 (356)
T ss_dssp CCCEESSCTTSSEECCHHHHH--TTCCCEEECCCBTTCCHHHHHHHHHHHHTTC
T ss_pred eeEEeccCCeeeEEEccCCCC--CCCCEEEEcCCCCCCCHHHHHHHHHHHhcCC
Confidence 899999999999999852100 1246999999999999999999999999854
No 10
>3o6x_A Glutamine synthetase; type III, beta barrel,dodecamer, ligas; HET: P3S ADP; 3.50A {Bacteroides fragilis}
Probab=100.00 E-value=2.4e-60 Score=547.32 Aligned_cols=284 Identities=21% Similarity=0.245 Sum_probs=235.5
Q ss_pred CcEEEEEecCC-ceeccCCccccceeeeccCCCCC------cCCCChHHHHHHHHHHHHHhcCc-----eeeeeeeeEEE
Q 003194 467 GEIRLMPDLST-RWRIPWQKQEEMIMADMHLKPGE------PWEYCPREALRKVSRLLKEEFNL-----VLNAGFEIEFY 534 (840)
Q Consensus 467 ~d~~l~PD~~T-~~~~Pw~~~~a~v~~d~~~~~g~------p~~~~PR~~Lkr~~~~~~~~~G~-----~~~~g~E~EF~ 534 (840)
.++++.||++| .++.| ++-.|.|.+++.+|+ |+..|||+++|++++.++ .+|. ++.+|+|+|||
T Consensus 144 arg~~~~D~ts~afi~~---~TL~IP~~f~s~~Ge~ld~ktPL~rsPR~ilk~A~~~Lk-~~G~d~~~v~~~~G~E~EFF 219 (729)
T 3o6x_A 144 ARGYTAWDGSSPAFVVD---TTLCIPTIFISYTGEALDYKTPLLKALAAVDKAATEVCQ-LFDKNITRVFTNLGWEQEYF 219 (729)
T ss_dssp ----CCBCSSSCCEEET---TEEECCBCCC----CCCBSHHHHHHHHHHHHHHHHHHHH-TSSSCCCCEEEEEEEEECEE
T ss_pred ccCceecCCCCCeEEeC---CeEEEEEEEEeCCCCcCCCCCchhhCHHHHHHHHHHHHH-HcCCCCccceEEEEeccEEE
Confidence 58899999999 77776 577788988887775 688999999999999998 6897 69999999999
Q ss_pred EEeecccC--------CCC--CcccCC----CCCcccCCccccchHHHHHHHHHHHhCCCceeeeccCCCCCceEEecCc
Q 003194 535 LLKSVLRE--------GKE--EWVPID----FTPYCSTAAYDAVSPVFQEVLADLHSLNISVEQLHAEAGKGQFEIALGH 600 (840)
Q Consensus 535 l~~~~~~~--------~~~--~~~p~~----~~~~~~~~~~~~~~~~~~~i~~~l~~~Gi~ve~~h~E~gpGQ~Ei~l~~ 600 (840)
||++.... |.. ...|.. ..+||...+ +...+++++|++.|+++||+|++.|+|+|||||||++.|
T Consensus 220 Lfd~~~~~~r~dl~~tGrtl~G~~P~kgq~l~d~Yf~~~p-d~~~~~~~di~~~L~~~GI~ve~~H~EvaPGQ~EI~~~~ 298 (729)
T 3o6x_A 220 LVDTSLYNARPDLRLTGRTLMGHSSAKDQQLEDHYFGSIP-PRVTAFMKELEIECHKLGIPVKTRHNEVAPNQFELAPIF 298 (729)
T ss_dssp EEEHHHHHSCTTHHHHSSCSCCCC--------------CC-HHHHHHHHHHHHHHHHHTCCEEEECBCSSTTEECCEECC
T ss_pred EEecchhccCcccccccccccCCCCCCCCCCCCccCCCCc-hhHHHHHHHHHHHHHHCCCCeEEeecCCCCCceEeccCC
Confidence 99974211 111 122321 137887666 778999999999999999999999999999999999999
Q ss_pred chHHHHHhHHHHHHHHHHHHHHHcCCeeEecccccCCCCCcccccccccccC-CCcccccCCCCCcC---CCcHHHHHHH
Q 003194 601 TVAAKAADNLIFTREVLRAVARKHGLLATFVPKFALDDIGSGSHVHLSLWQN-GENVFMASDSSSKH---GMSSVGEKFM 676 (840)
Q Consensus 601 ~~~l~aaD~~~~~r~~ik~vA~~~Gl~ATFmpKP~~~~~GsG~H~H~Sl~~~-g~n~f~~~d~~~~~---~lS~~~~~fi 676 (840)
+++++|||+++++|++||+||++||+.|||||||+.+.+|||||+|+|||++ |+|+|.++ +++. ++|.++++||
T Consensus 299 ~~al~AAD~~~l~K~vvK~VA~~hGl~ATFMPKP~~g~nGSG~HvH~SL~~~~G~NLF~~~--d~~~~~~~~s~~~~~fI 376 (729)
T 3o6x_A 299 ENCNLANDHNQLVMDLMKRIARKHHFAVLFHEKPYNGVNGSGKHNNWSLCTDTGINLFAPG--KNPKGNMLFLTFLVNVL 376 (729)
T ss_dssp EEHHHHHHHHHHHHHHHHHHHHHTTEEEECSSCSSTTSCCCBEEEEEEEEETTCCCSSCCC--SSTTTCHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHhCCEEEEecccCCCCCCCcceeeccccCCCCCcCCCCC--CCccchhhHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999976 99999843 3333 4688899999
Q ss_pred HHHHHhHHhhhhhcCCCCCccccCCCCCccCcc----------------cc-----------------ccc---------
Q 003194 677 AGVLHHLSSILAFTAPVPNSYDRIQPNTWSGAY----------------QC-----------------WGK--------- 714 (840)
Q Consensus 677 aGlL~h~~al~a~~~Pt~nSY~Rl~~~~~ap~~----------------~~-----------------WG~--------- 714 (840)
||||+|+++|+||++|++||| || |++|||++ +. ||.
T Consensus 377 aGVLkHa~aL~A~~aPt~NSY-RL-~g~EAP~~iisi~lG~~l~~vl~~i~~~~~g~~~~~~~~~~~~~Gv~~lP~~~~d 454 (729)
T 3o6x_A 377 MMVHKNQDLLRASIMSAGNSH-RL-GANEAPPAILSIFLGSQLSATLDEIVRQVTNSKMTPEEKTTLKLGIGRIPEILLD 454 (729)
T ss_dssp HHHHHTHHHHHHHSCCHHHHT-TS-SSSSCCCSCCCEECCHHHHHHHHCC------------------------------
T ss_pred HHHHHhHHHHHHHhCCCcccc-cc-CCCcCCchhhhhhhhHHHHHHHHHHHhhccCCCCCccccccccCCcccCCCCccC
Confidence 999999999999999999999 99 99999987 44 343
Q ss_pred ---cCCCCcccccCCCCCCCCccceEEEcCCCCCCC---HHHHHHHHHHHHHHhhhc-CCC
Q 003194 715 ---ENREAPLRTACPPGVKDGVVSNFELKSFDGCAN---PHLGLAAIIASGIDGLRR-LCL 768 (840)
Q Consensus 715 ---~NR~~~iRv~~~~~~~~~~~~~~E~R~~d~~aN---PYLalAailaAGl~GI~~-l~~ 768 (840)
+||++|+|+.. +|||+|++|+++| |||+|+|++|+|++||++ |+.
T Consensus 455 ~~drNRTspfaftG---------nrfEfR~~Gss~n~a~P~l~lnaivA~~L~gi~~~Le~ 506 (729)
T 3o6x_A 455 TTDRNRTSPFAFTG---------NRFEFRAAGSSANCAAAMIAINAAMANQLNEFKASVDK 506 (729)
T ss_dssp ---CCCSSSSCBCS---------SSEEETTSBSSSCHHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred cCccccCCCccccC---------CeeEEecCCcccchhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999852 4999999999999 999999999999999999 875
No 11
>2qpx_A Predicted metal-dependent hydrolase of the TIM-BA; YP_805737.1, putative metal-dependent hydrolase; HET: KCX MSE; 1.40A {Lactobacillus casei}
Probab=100.00 E-value=4.8e-57 Score=505.66 Aligned_cols=362 Identities=29% Similarity=0.433 Sum_probs=305.8
Q ss_pred hhHHHHHhccCCccccCCCCcccCCCC---cchhhhccccCCCCc-cCCCcchhhhhHHHHHHhhhCCCC--CHHHHHHH
Q 003194 3 FEELREVVENIELVDGHAHNIVSLDSS---FPFIQSFSEATGPAL-SYAPYSLSFKRNLKNIAELYGCDS--SLQAVEEY 76 (840)
Q Consensus 3 ~~~l~~~i~~~p~iD~H~H~~~~~~~~---~~~~~~~~ea~~~~~-~~~~~~~~~~~~~~~l~~~fg~~~--~~~~i~~~ 76 (840)
+++|+++|+++|||||||||+|..+.. +||+.++|||+|+++ .+++.+++ +++++. |||++ |+++||++
T Consensus 2 ~~~l~~~~~~~~~id~h~h~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~----~~~~~~-fg~~~~~~a~~i~~~ 76 (376)
T 2qpx_A 2 MDDLSEFVDQVPLLDHHCHFLIDGKVPNRDDRLAQVSTEADKDYPLADTKNRLA----YHGFLA-LAKEFALDANNPLAA 76 (376)
T ss_dssp CCCCHHHHHHCCEEEEEECCBBCTTCSCHHHHHHHHTSSCCTTSCHHHHTTSHH----HHHHHH-HHHHHCSSTTSTTCC
T ss_pred hHHHHHHHhcCCccccCCccccCcccccccCchHhhhccCCCccccccChhhHH----HHHHHh-CCCCCCCCHHHHHHH
Confidence 357899999999999999999988754 599999999999986 45666665 566667 99998 78889999
Q ss_pred HHHcCcccHHHHHHhhCCeEEEEEecCCC-CCCCCChHHHHhhccc-cceEEeccccHHHHHHHhCCCCCcccHHHHHHH
Q 003194 77 RRAAGLQSICSICFEAANISAVLIDDGLK-LDKKHGLDWHKSLVPF-VGRILRIERLAEEILDQASPDGSIWTLDVFIET 154 (840)
Q Consensus 77 ~~~l~~~~~~r~ll~~~~v~~~~~d~g~~-~d~~~~~~~h~~~~~~-~~~i~rie~~a~~~~~~~~~~~~~~~~~~~~~a 154 (840)
|+++++++++|+||+++||+++|+|||+. +||+++++||+++++. |.+|+|||.+++..... +.+|++|+++
T Consensus 77 ~~~~~~~~~~r~~l~~~~v~~~~~dt~~~~ddp~~~l~~h~~~~~~~~~~~~~ie~~~~~~~~~------~~~~~~~~~~ 150 (376)
T 2qpx_A 77 MNDPGYATYNHRIFGHFHFKELLIDTGFVPDDPILDLDQTAELVGIPVKAIYRLETHAEDFMLE------HDNFAAWWQA 150 (376)
T ss_dssp CCHHHHHHHHHHHHHHTTEEEEEEETTCCCSSBCCCHHHHHHHHTSCEEEEEEHHHHHHHHHTT------CSSHHHHHHH
T ss_pred HHhcCHhHHHHHHHHHCCceEEEecCCCCCCCCCCCHHHHHHhcCcchhheeccchHHHHHhcc------cccHHHHHHH
Confidence 99888889999999999999999999874 5679999999999863 67999999987755433 3479999999
Q ss_pred HHHHHHhhc-cccccceeeecccCCCCCCCCCCHHHHHHHHHHHHhCCCCCcCCchhhhhHHHHHHHHHHhhCCCcEEEe
Q 003194 155 FLKQLRSAA-NKIVGLKSIAAYRSGLEINPHVTKKDAEEGLAEDLRSGKPVRITNKSLIDYIFISSLEVAQFLDLPLQIH 233 (840)
Q Consensus 155 l~~~l~~~~-~~~vgfks~~~y~~Gl~~~p~~~~~ea~~~~~r~l~~~~~~~~~~~~l~d~~l~~l~e~~~e~glPvq~H 233 (840)
|+++|+++. .+++|||||.||||||++.+ .++++++++|+|++.++ +..++++.+..+++++++++|+++|+|||+|
T Consensus 151 ~~~~l~~~~~~g~~gfksv~~~~~gl~~~~-~~~~~a~~~~~~~~~~~-~~~~~d~~~~p~~l~~~~e~a~e~glpv~iH 228 (376)
T 2qpx_A 151 FSNDVKQAKAHGFVGFKSIAAYRVGLHLEP-VNVIEAAAGFDTWKHSG-EKRLTSKPLIDYMLYHVAPFIIAQDMPLQFH 228 (376)
T ss_dssp HHHHHHTTTTTTCCCEEECHHHHTCSCCCC-CCHHHHHHHHHHHHHHC-CCSCCCHHHHHHHHHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHHHCCCceeccceEecCCCCCCC-CCHHHHHHHHHHHHcCC-CCCccchhHhHHHHHHHHHHHHHCCCeEEEE
Confidence 999999985 59999999999999999655 47999999999999753 4577788898888999999999999999999
Q ss_pred eCCCCCCCCcCCcChhhhHHHHhhcCCCCcEEEEeCCCCchHHHHHHHHHhCCEeEecccccCCCCcHHHHHHHHHHHHH
Q 003194 234 TGFGDKDLDLRLSNPLHLRAILEDKRFSKCRFVLLHASYPFSKEASYLAYVYPQVYLDFGLAIPKLSVQGMISSIKELLE 313 (840)
Q Consensus 234 ~G~gd~~~~~~~~~P~~L~~l~~~~~~P~l~~VllH~g~p~~~e~~~la~~~pNVyld~s~~~~~~~~~g~~~~l~~~le 313 (840)
+|.++.+.+...+.|..+.+++++.+||+++||+.| |+|+.+++..++..|||||+|+|| +++..+.++...++++++
T Consensus 229 ~g~~d~~~~~~~~~p~~l~~ll~~~~~P~lkiVl~H-g~~~~~~~~~l~~~~~nvy~d~s~-~~~~~~~~~~~~l~~l~~ 306 (376)
T 2qpx_A 229 VGYGDADTDMYLGNPLLMRDYLKAFTKKGLKVVLLH-CYPYHREAGYLASVFPNLYFDISL-LDNLGPSGASRVFNEAVE 306 (376)
T ss_dssp ESCCCTTSCGGGCCGGGGHHHHHHHGGGTCCEEEEE-CTTCHHHHHHHHHHSTTEEEECTT-HHHHSGGGHHHHHHHHTS
T ss_pred eCCCCCCCCccccCHHHHHHHHhcCCCCCCcEEEEC-CCccHHHHHHHHHhCCCEEEeccc-ccccChhhHHHHHHHHHH
Confidence 998766666777888889999985579999999999 899999999999999999999998 333334578889999999
Q ss_pred HCCCCcEEEecCCCCCcccchhhHHHHHHHHHHHHhhhhcCCCCChhH-HHHHHHHHHHHhHHHHhcCCCC
Q 003194 314 LAPTKKVMFSTDAYASPETYFLGAKRAREVVFSVLRDTCIDEDLSVGE-AIEVAKDIFALNAAQFYKINLG 383 (840)
Q Consensus 314 ~~~~~kilfgSD~~~~Pe~~~~~~~~~R~~l~~~l~~~v~~g~l~~~e-a~~~~~~Il~~NA~rly~l~~~ 383 (840)
..|.+|||||||++.+|+.+|++++++++.+++++++ -.++..+ ..+.+++|+++||+|||+++.+
T Consensus 307 ~~g~dRiLfGSD~P~~~e~~~~~~~~~~~~l~~l~~~----~~ls~~~~~~~~~~~I~~~NA~rlf~l~~~ 373 (376)
T 2qpx_A 307 LAPYTRILFASDASTYPEMYGLAARQFKQALVAHFNQ----LPFVDLAQKKAWINAICWQTSAKLYHQERE 373 (376)
T ss_dssp SSCGGGEECCCCCCBSHHHHHHHHHHHHHHHHHHHHT----CSSCCHHHHHHHHHHHHTHHHHHHTTCGGG
T ss_pred hcCCCCEEEECCCCccchhhcccHHHHHHHHHHHHcc----cCcchhhcCHHHHHHHHHHhHHHHhCCCCC
Confidence 9999999999998777766677778889999887753 1344322 2356999999999999998643
No 12
>1j5s_A Uronate isomerase; TM0064, structural genomics, JCSG, PSI, protein structure initiative, joint center for structural genomics; 2.85A {Thermotoga maritima} SCOP: c.1.9.8
Probab=100.00 E-value=1.5e-53 Score=477.22 Aligned_cols=360 Identities=15% Similarity=0.131 Sum_probs=296.3
Q ss_pred hHHHHHhccCCccccCCCCcccCC-CCcchhhhc-------------------------cccCC--------CCccCCCc
Q 003194 4 EELREVVENIELVDGHAHNIVSLD-SSFPFIQSF-------------------------SEATG--------PALSYAPY 49 (840)
Q Consensus 4 ~~l~~~i~~~p~iD~H~H~~~~~~-~~~~~~~~~-------------------------~ea~~--------~~~~~~~~ 49 (840)
.+|++.++++||||.|||...... .+.+|+.++ .+++. ..+....+
T Consensus 27 ~~Ly~~~~~~PIiD~HcHl~p~~i~~~~~F~ni~e~wl~gDHYkwr~mRa~Gv~e~~itg~~~~~ekf~~~a~~~~~~~G 106 (463)
T 1j5s_A 27 VRLFNEVKDLPIVDPHNHLDAKDIVENKPWNDIWEVEGATDHYVWELMRRCGVSEEYITGSRSNKEKWLALAKVFPRFVG 106 (463)
T ss_dssp HHHHHHHTTSCEEESCCCCCHHHHHHTCCCSCHHHHHTTTCHHHHHHHHHTTCCGGGTTSSSCHHHHHHHHHHHGGGGTT
T ss_pred HHHHHHhccCCeecCccCCCHHHhccccCcccHHHHhccCchHHHHHHhhcCCChhhhcCCCCHHHHHHHHHhhhHHhcC
Confidence 368888899999999999887442 234566555 22211 00224567
Q ss_pred chhhhhHHHHHHhhhCCCC-----CHHHHHHHHHHcCcccHHHHHHhhCCeEEEEEecCCCCCCCCChHHHHhhcc----
Q 003194 50 SLSFKRNLKNIAELYGCDS-----SLQAVEEYRRAAGLQSICSICFEAANISAVLIDDGLKLDKKHGLDWHKSLVP---- 120 (840)
Q Consensus 50 ~~~~~~~~~~l~~~fg~~~-----~~~~i~~~~~~l~~~~~~r~ll~~~~v~~~~~d~g~~~d~~~~~~~h~~~~~---- 120 (840)
+..|.|..++|+++|||++ ||++||++|+++.+++++|+||+++||+++|| ||||+|+|+||++++.
T Consensus 107 nply~W~hlel~~~FGi~~~l~~~ta~~i~~~~~e~l~~~~~r~ll~~snV~~v~t----TddP~D~Le~h~~l~~~~~~ 182 (463)
T 1j5s_A 107 NPTYEWIHLDLWRRFNIKKVISEETAEEIWEETKKKLPEMTPQKLLRDMKVEILCT----TDDPVSTLEHHRKAKEAVEG 182 (463)
T ss_dssp SHHHHHHHHHHHHHSCCCCCCSHHHHHHHHHHHHHHSTTCCHHHHHHHTTEEEEEC----CBCTTCCCHHHHHHHHHCCS
T ss_pred CHHHHHHHHHHHHhcCCCCCCCccCHHHHHHHHHHhchhhhHHHHHHHcCCEEEEe----CCCCCCchHHHHHHhcCCCC
Confidence 7888999999999999997 89999999986667789999999999999999 8899999999999541
Q ss_pred -------ccceEEeccccHH-HHHHHhCC-CC-CcccHHHHHHHHHHHHHhhccccccceeeec--ccCCC--CCCCCCC
Q 003194 121 -------FVGRILRIERLAE-EILDQASP-DG-SIWTLDVFIETFLKQLRSAANKIVGLKSIAA--YRSGL--EINPHVT 186 (840)
Q Consensus 121 -------~~~~i~rie~~a~-~~~~~~~~-~~-~~~~~~~~~~al~~~l~~~~~~~vgfks~~~--y~~Gl--~~~p~~~ 186 (840)
|++++++||...+ ++++++++ .+ +|.+|++|++||++|+++ |+++|| +|||| +..+.++
T Consensus 183 ~~v~P~~RPD~~~~ie~~~f~~~v~~L~~~sg~~i~s~~~~~~Al~~r~~~-------F~~~G~~asdhgl~~~~~~~~s 255 (463)
T 1j5s_A 183 VTILPTWRPDRAMNVDKEGWREYVEKMGERYGEDTSTLDGFLNALWKSHEH-------FKEHGCVASDHALLEPSVYYVD 255 (463)
T ss_dssp CEEECCBCCHHHHCTTSTTHHHHHHHHHHHHTSCTTSHHHHHHHHHHHHHH-------HHTTTCCEEEEEESSCCCCCCC
T ss_pred ceeeeccCcchhcccCchhHHHHHHHHHHHhCCCcCCHHHHHHHHHHHHHH-------HHHcCcEEEccCCCcccCCCCC
Confidence 2458889997655 78877765 33 788999999999999998 566655 69998 6555589
Q ss_pred HHHHHHHHHHHHhCCCCCcCCchhhhhHHHHHHHHHHhhCCCcEEEeeCCCC-------------CCCCcCCcC-h--hh
Q 003194 187 KKDAEEGLAEDLRSGKPVRITNKSLIDYIFISSLEVAQFLDLPLQIHTGFGD-------------KDLDLRLSN-P--LH 250 (840)
Q Consensus 187 ~~ea~~~~~r~l~~~~~~~~~~~~l~d~~l~~l~e~~~e~glPvq~H~G~gd-------------~~~~~~~~~-P--~~ 250 (840)
+++++++|+|+++++.....+...+..+++..+.++|.++|||||+|+|++. .|.|..... + ..
T Consensus 256 ~~e~~~if~k~l~g~~ls~~e~~~~~~~ll~~l~~~~~e~g~~mQlH~G~~Rn~n~~~~~~~G~d~G~D~~~~~~~~~~~ 335 (463)
T 1j5s_A 256 ENRARAVHEKAFSGEKLTQDEINDYKAFMMVQFGKMNQETNWVTQLHIGALRDYRDSLFKTLGPDSGGDISTNFLRIAEG 335 (463)
T ss_dssp HHHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECEECSCSHHHHHHTCSSSSCCEECSCCCHHHH
T ss_pred HHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHhcCCcEEEeecCCCCCCHHHHHHhCCCCCCCCccccchHHHH
Confidence 9999999999998743344445567888999999999999999999999843 344443222 2 24
Q ss_pred hHHHHhhcCCCC-cEEEEeCCCCchHHHHHHHHHhCCEeEecccccCCCCcHHHHHHHHHHHHHHCCCCcEE-EecCCCC
Q 003194 251 LRAILEDKRFSK-CRFVLLHASYPFSKEASYLAYVYPQVYLDFGLAIPKLSVQGMISSIKELLELAPTKKVM-FSTDAYA 328 (840)
Q Consensus 251 L~~l~~~~~~P~-l~~VllH~g~p~~~e~~~la~~~pNVyld~s~~~~~~~~~g~~~~l~~~le~~~~~kil-fgSD~~~ 328 (840)
|..+++ ++++ .|+|+.|+.-.+.+++++|+++|||||+|.+|||++. +.||.+++++++|++|++|++ |+||+|+
T Consensus 336 L~~lL~--~~~~~~k~iLy~Lnp~~~~~la~lag~Fp~vq~g~~WWf~d~-~~gm~~~l~~l~e~~~lskfvGmlTDsRs 412 (463)
T 1j5s_A 336 LRYFLN--EFDGKLKIVLYVLDPTHLPTISTIARAFPNVYVGAPWWFNDS-PFGMEMHLKYLASVDLLYNLAGMVTDSRK 412 (463)
T ss_dssp HHHHHH--HSTTTSCEEEEESSGGGHHHHHHHHHHCTTEEECCCCSTTCS-HHHHHHHHHHHHTTSCGGGCCCCCCCCSS
T ss_pred HHHHHH--hcccCCCeEEEecCHhhHHHHHHHHccCCccccCCchhhcCC-HHHHHHHHHHHHHhcchhccccccccchH
Confidence 888888 6766 7777777733378999999999999999999999985 899999999999999999999 9999999
Q ss_pred Ccccch-hhHHHHHHHHHHHHhhhhcCCCCChhHHHHHHHHHHHHhHHHHhc
Q 003194 329 SPETYF-LGAKRAREVVFSVLRDTCIDEDLSVGEAIEVAKDIFALNAAQFYK 379 (840)
Q Consensus 329 ~Pe~~~-~~~~~~R~~l~~~l~~~v~~g~l~~~ea~~~~~~Il~~NA~rly~ 379 (840)
| ++| ++|++|||+||++|++||++|++|.+++.+++++|||+||+++|+
T Consensus 413 f--LsY~~rhe~fRRiLc~~Lg~~Ve~G~~p~~~~~~iv~~I~y~NA~~~f~ 462 (463)
T 1j5s_A 413 L--LSFGSRTEMFRRVLSNVVGEMVEKGQIPIKEARELVKHVSYDGPKALFF 462 (463)
T ss_dssp T--THHHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHTHHHHHHHC
T ss_pred H--hhccHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHhHHHHhC
Confidence 9 588 999999999999999999999999888999999999999999996
No 13
>3iac_A Glucuronate isomerase; IDP02065, structural genom center for structural genomics of infectious diseases, CSGI; 2.22A {Salmonella typhimurium} SCOP: c.1.9.0
Probab=100.00 E-value=4.8e-52 Score=459.43 Aligned_cols=362 Identities=14% Similarity=0.151 Sum_probs=307.4
Q ss_pred hHHHH-HhccCCccccCCCCccc-----------------CC---------CCcchhhhcc-ccCCC--------CccCC
Q 003194 4 EELRE-VVENIELVDGHAHNIVS-----------------LD---------SSFPFIQSFS-EATGP--------ALSYA 47 (840)
Q Consensus 4 ~~l~~-~i~~~p~iD~H~H~~~~-----------------~~---------~~~~~~~~~~-ea~~~--------~~~~~ 47 (840)
.+|++ .+.++||||-|||---. .| .+.|.+.++. +++.- .+...
T Consensus 20 r~LYh~~a~~lPIiDyH~Hl~P~~iaen~~F~nit~lwl~gDHYkwR~mrs~Gv~e~~itG~~a~~~ekf~~~A~t~p~~ 99 (473)
T 3iac_A 20 RTLYHKYAAPMPIYDFHCHLSPQEIADDRRFDNLGQIWLEGDHYKWRALRSAGVDESLITGKETSDYEKYMAWANTVPKT 99 (473)
T ss_dssp HHHHHHTTTTSCEEECSCCCCHHHHHHTCCCSCHHHHHHSSCSHHHHHHHHTTCCGGGTTCTTSCHHHHHHHHHHHGGGC
T ss_pred HHHHHHHHhcCCEECCCCCCCHHHhccCCCCCCHHHHhccCchHHHHHHHHcCCCHHHccCCCCChHHHHHHHHHHHHHh
Confidence 36784 89999999999996542 11 2456677766 55431 13357
Q ss_pred CcchhhhhHHHHHHhhhCCCC------CHHHHHHHHH-Hc-CcccHHHHHHhhCCeEEEEEecCCCCCCCCChHHHHhhc
Q 003194 48 PYSLSFKRNLKNIAELYGCDS------SLQAVEEYRR-AA-GLQSICSICFEAANISAVLIDDGLKLDKKHGLDWHKSLV 119 (840)
Q Consensus 48 ~~~~~~~~~~~~l~~~fg~~~------~~~~i~~~~~-~l-~~~~~~r~ll~~~~v~~~~~d~g~~~d~~~~~~~h~~~~ 119 (840)
.++..|.|..+||+++|||++ ||++||++++ +| ++++++|.|++++||++||| ||||+|+|+||++++
T Consensus 100 ~gnPly~W~hleL~r~FGi~~~~L~~~tA~~I~d~~n~~L~~~~f~~r~L~~~~nVe~v~T----TDDP~D~L~~H~~i~ 175 (473)
T 3iac_A 100 LGNPLYHWTHLELRRPFGITGTLFGPDTAESIWTQCNEKLATPAFSARGIMQQMNVRMVGT----TDDPIDSLEYHRQIA 175 (473)
T ss_dssp TTSHHHHHHHHHHHTTTCCCSCCCSHHHHHHHHHHHHHHHTSGGGSHHHHHHHTTEEEEEC----CBCTTCCCHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHcCCCCCCCChhhHHHHHHHHHHHhCCCCCCHHHHHHHCCcEEEEe----CCCccccHHHHHHHH
Confidence 788899999999999999986 8999999998 45 56799999999999999999 999999999999987
Q ss_pred c------------ccceEEeccccHH-HHHHHhCC--CCCcccHHHHHHHHHHHHHhhccccccceeeecc--cCCCCCC
Q 003194 120 P------------FVGRILRIERLAE-EILDQASP--DGSIWTLDVFIETFLKQLRSAANKIVGLKSIAAY--RSGLEIN 182 (840)
Q Consensus 120 ~------------~~~~i~rie~~a~-~~~~~~~~--~~~~~~~~~~~~al~~~l~~~~~~~vgfks~~~y--~~Gl~~~ 182 (840)
+ |+++++.||...+ +++++|++ +.+|.+|++|++||++|+++ |++.||. |||++..
T Consensus 176 ~~~~f~~~VlPtfRPD~a~~i~~~~f~~yv~~L~~~sg~~i~~~~~ll~AL~~R~~~-------F~~~Gcr~sDHgl~~~ 248 (473)
T 3iac_A 176 ADDSIDIEVAPSWRPDKVFKIELDGFVDYLRKLEAAADVSITRFDDLRQALTRRLDH-------FAACGCRASDHGIETL 248 (473)
T ss_dssp HCTTCCSEEECCBCCHHHHCTTSTTHHHHHHHHHHHHTCCCSSHHHHHHHHHHHHHH-------HHHTTCCEEEEEESSC
T ss_pred hcCCCCceEeeccCCccccCCCchhHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHH-------HHHcCcEehhcCCccc
Confidence 4 3568899998767 88999887 44789999999999999999 7788885 9999865
Q ss_pred CC---CCHHHHHHHHHHHHhCCCCCcCCchhhhhHHHHHHHHHHhhCCCcEEEeeCC------------C-CCCCCcC--
Q 003194 183 PH---VTKKDAEEGLAEDLRSGKPVRITNKSLIDYIFISSLEVAQFLDLPLQIHTGF------------G-DKDLDLR-- 244 (840)
Q Consensus 183 p~---~~~~ea~~~~~r~l~~~~~~~~~~~~l~d~~l~~l~e~~~e~glPvq~H~G~------------g-d~~~~~~-- 244 (840)
.+ ++.++++++|.|+++++.....+...+..++++.+.+++.|.||+||+|.|. | |+|.|..
T Consensus 249 ~~~~~~s~~e~~~if~k~l~G~~ls~~e~~~f~~~~l~~la~~~~e~gwvmQlH~Ga~Rn~n~~~f~~lG~D~G~D~~~d 328 (473)
T 3iac_A 249 RFAPVPDDAQLDAILGKRLAGETLSELEIAQFTTAVLVWLGRQYAARGWVMQLHIGAIRNNNTRMFRLLGPDTGFDSIGD 328 (473)
T ss_dssp CCCCCCCHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECEECCCCHHHHHHHCSSSSCCEECC
T ss_pred ccCCCCCHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHHCCCeeeeecccccCCCHHHHHHhCCCCCCCCCCC
Confidence 43 4789999999999987444445566678889999999999999999999998 4 4566543
Q ss_pred --CcChh--hhHHHHhhcCCCCcEEEEeCCCCchHHHHHHHHHhCCE------eEecccccCCCCcHHHHHHHHHHHHHH
Q 003194 245 --LSNPL--HLRAILEDKRFSKCRFVLLHASYPFSKEASYLAYVYPQ------VYLDFGLAIPKLSVQGMISSIKELLEL 314 (840)
Q Consensus 245 --~~~P~--~L~~l~~~~~~P~l~~VllH~g~p~~~e~~~la~~~pN------Vyld~s~~~~~~~~~g~~~~l~~~le~ 314 (840)
++.++ +|+.+-..+++|+++++.+++. +.++++.|+++||+ ||++.+|||++. ++||+++++.+.++
T Consensus 329 ~~~~~~L~~lLd~~~~~~~LpktILy~Lnp~--~n~~latlag~F~~~~~~gkvq~G~~WWFnD~-~~GM~rq~~~l~~~ 405 (473)
T 3iac_A 329 NNISWALSRLLDSMDVTNELPKTILYCLNPR--DNEVLATMIGNFQGPGIAGKVQFGSGWWFNDQ-KDGMLRQLEQLSQM 405 (473)
T ss_dssp CCCHHHHHHHHHHHHTTTCCCEEEEEESSGG--GHHHHHHHGGGSCCTTSTTSEEECCCCGGGCS-HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCcccCCCCeeeEEeCCcc--chHHHHHHHhhcCCCCcCceeEecCcccccCC-HHHHHHHHHHHHHh
Confidence 33333 5666666678999999999997 67889999999999 999999999995 99999999999999
Q ss_pred CCCCcEE-EecCCCCCcccchhhHHHHHHHHHHHHhhhhcCCCCChhHH--HHHHHHHHHHhHHHHhcCC
Q 003194 315 APTKKVM-FSTDAYASPETYFLGAKRAREVVFSVLRDTCIDEDLSVGEA--IEVAKDIFALNAAQFYKIN 381 (840)
Q Consensus 315 ~~~~kil-fgSD~~~~Pe~~~~~~~~~R~~l~~~l~~~v~~g~l~~~ea--~~~~~~Il~~NA~rly~l~ 381 (840)
++++|++ |.||+|+|. +|++|++|||+||++|++||++|++|.+++ .+++++|+|+||+++|++.
T Consensus 406 g~l~~fvGmltDSRsFl--Sy~RHeyfRRilc~~lg~~Ve~G~~p~D~~~l~~iv~dI~y~nak~yF~~~ 473 (473)
T 3iac_A 406 GLLSQFVGMLTDSRSFL--SYTRHEYFRRILCNLLGQWAQDGEIPDDEAMLSRMVQDICFNNAQRYFTIK 473 (473)
T ss_dssp SCGGGCCCCCCCCSCTT--TTHHHHHHHHHHHHHHHHHHHTTSSCCCHHHHHHHHHHHHTHHHHHHTSCC
T ss_pred hhhhcccccccchHhhh--hhHHHHHHHHHHHHHHHHHHHcCCCCccHHHHHHHHHHHHHhHHHHHhCCC
Confidence 9999999 999999998 679999999999999999999999999987 8999999999999999963
No 14
>2q01_A Uronate isomerase; structural genomics, protein structure initiative NEW YORK SGX research center for structural genomics, nysgx; 2.34A {Caulobacter crescentus}
Probab=100.00 E-value=2.3e-51 Score=463.18 Aligned_cols=362 Identities=15% Similarity=0.165 Sum_probs=294.3
Q ss_pred HHHHHhccCCccccCCCCcccC---C-----------------------CCcchhh--h-----ccccCC--------CC
Q 003194 5 ELREVVENIELVDGHAHNIVSL---D-----------------------SSFPFIQ--S-----FSEATG--------PA 43 (840)
Q Consensus 5 ~l~~~i~~~p~iD~H~H~~~~~---~-----------------------~~~~~~~--~-----~~ea~~--------~~ 43 (840)
+|++.+.++||||-|||-.-.. + .+.|.+- | +.+++. ..
T Consensus 27 ~Ly~~a~~~PIiDyH~Hl~p~~iaen~~f~~i~elwl~gdHYkwr~mRa~Gv~e~~~~i~~~~gtg~~~~~ekf~~~a~~ 106 (497)
T 2q01_A 27 GLYALVKDLPIISPHGHTDPSWFATNAPFQDATDLLLAPDHYLFRMLYSQGVSLDALKVRSKAGVPDTDPREAWRVFASH 106 (497)
T ss_dssp HHHHTTTTSCEEECSCCCCTHHHHHCCCCCCHHHHTTSSCHHHHHHHHTTTCCSTTTTCCBTTBSCSSCHHHHHHHHHHT
T ss_pred HHHHHHhCCCeecCccCCCHHHHhhcCCCCCHHHHhccCcHHHHHHHHHcCCChhhhcccccccCCCCCHHHHHHHHHHH
Confidence 6888889999999999966421 1 1122222 2 223321 11
Q ss_pred ccCCCcchhhhhHHHHHHhhhCCCC-----CHHHHHHHHHH-cCcc-cHHHHHHhhCCeEEEEEecCCCCCCCCChHHHH
Q 003194 44 LSYAPYSLSFKRNLKNIAELYGCDS-----SLQAVEEYRRA-AGLQ-SICSICFEAANISAVLIDDGLKLDKKHGLDWHK 116 (840)
Q Consensus 44 ~~~~~~~~~~~~~~~~l~~~fg~~~-----~~~~i~~~~~~-l~~~-~~~r~ll~~~~v~~~~~d~g~~~d~~~~~~~h~ 116 (840)
+....++..|.|..++|+++|||++ |+++||++|++ +..+ +++|.|++++||++||| ||||+|+|+||+
T Consensus 107 ~~~~~gnPly~W~hleL~~~FGi~~~l~~~ta~~i~~~~ne~l~~~~~~~R~Ll~~snV~~v~T----TddP~D~Le~h~ 182 (497)
T 2q01_A 107 FYLFRGTPSWVWLNHVFSQVFGFTEFLEASNADDYFDRITAALATDAFRPRALFDRFNIETLAT----TEGPHESLQHHA 182 (497)
T ss_dssp GGGGTTSHHHHHHHHHHHHTTCCCBCCCTTTHHHHHHHHHHHHTSGGGSHHHHHHHTTEEEEEC----CBCTTSCCHHHH
T ss_pred hHHhcCCHHHHHHHHHHHHhcCCCCCCCccCHHHHHHHHHHhhcCccchHHHHHHHcCCEEEEe----CCCCCcchhhHH
Confidence 2346778899999999999999986 99999999986 5544 67999999999999999 889999999999
Q ss_pred hhcc-----------ccceEEeccccHH-HHHHHhCC-CC-CcccHHHHHHHHHHHHHhhccccccceeeec--ccCCCC
Q 003194 117 SLVP-----------FVGRILRIERLAE-EILDQASP-DG-SIWTLDVFIETFLKQLRSAANKIVGLKSIAA--YRSGLE 180 (840)
Q Consensus 117 ~~~~-----------~~~~i~rie~~a~-~~~~~~~~-~~-~~~~~~~~~~al~~~l~~~~~~~vgfks~~~--y~~Gl~ 180 (840)
+++. |++++|+||...+ ++++++++ .+ +|.+|++|+++|++|+++ |+++|| +||||+
T Consensus 183 ~l~~~~f~~~v~PafRpD~~l~ie~~~f~~~v~~L~e~sg~~i~s~~~~~~AL~~r~~~-------F~~~Gc~asdhgl~ 255 (497)
T 2q01_A 183 AIRESGWGGHVITAYRPDAVIDFEDERSPRAFERFAETSGQDVYSWKSYLEAHRLRRQA-------FIDAGATSSDHGHP 255 (497)
T ss_dssp HHHHSSCCCCEECCBCCCTTTCTTCTTHHHHHHHHHHHHTSCTTSHHHHHHHHHHHHHH-------HHHTTCCEEEECCS
T ss_pred HHhhCCCCceeeeccCchhhcCCCcccHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHH-------HHHcCCEEeccCCc
Confidence 8642 2458889998766 88888776 33 688999999999999998 555555 699998
Q ss_pred CCCC--CCHHHHHHHHHHHHhCCCCCcCCchhhhhHHHHHHHHHHhhCCCcEEEeeCC------------C-CCCCC---
Q 003194 181 INPH--VTKKDAEEGLAEDLRSGKPVRITNKSLIDYIFISSLEVAQFLDLPLQIHTGF------------G-DKDLD--- 242 (840)
Q Consensus 181 ~~p~--~~~~ea~~~~~r~l~~~~~~~~~~~~l~d~~l~~l~e~~~e~glPvq~H~G~------------g-d~~~~--- 242 (840)
..+. +++++++++|+|+++++. ...+...+..+++..+.++|.++|||||+|+|+ | |+|.|
T Consensus 256 ~~~~~~~s~~e~~~if~k~l~g~~-s~~e~~~~~~~ll~~l~~~~~e~gw~mQlH~Ga~Rn~n~~m~~~~G~d~G~D~~~ 334 (497)
T 2q01_A 256 TAATADLSDVEAEALFNSLVKGDV-TPEKAELFRAQMLTEMAKMSLDDGLVMQIHPGSHRNHNVGLLNSHGRDKGADIPM 334 (497)
T ss_dssp SCCCCCCCHHHHHHHHHHHHHTCC-CHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCEECCCCHHHHHHTCSSSSCCEEC
T ss_pred ccCCCCCCHHHHHHHHHHHHcCCC-CHHHHHHHHHHHHHHHHHHHHhcCCcEEEeeccCCCCCHHHHHHcCCCCCCCCCC
Confidence 3333 689999999999999742 333445678889999999999999999999998 4 44554
Q ss_pred -cCCcChh--hhHHHHhhcCCCCcEEEEeCCCCc--hHHHHHHHHHhCCEeEecccccCCCCcHHHHHHHHHHHHHHCCC
Q 003194 243 -LRLSNPL--HLRAILEDKRFSKCRFVLLHASYP--FSKEASYLAYVYPQVYLDFGLAIPKLSVQGMISSIKELLELAPT 317 (840)
Q Consensus 243 -~~~~~P~--~L~~l~~~~~~P~l~~VllH~g~p--~~~e~~~la~~~pNVyld~s~~~~~~~~~g~~~~l~~~le~~~~ 317 (840)
...++|+ +|+.+. .+|+.|+|+.|+ +| |.+++++|+++|||||+|.+|||++. +.||.++++++++++|+
T Consensus 335 ~~~~a~~L~~lL~~l~---~~~~pktILy~L-np~~y~~elatlag~Fpkvq~G~~WWF~d~-~~gm~~ql~~l~el~~l 409 (497)
T 2q01_A 335 RTEYVDALKPLLTRLG---NDPRLSIILFTL-DETTYSRELAPLAGHYPVLKLGPSWWFHDS-PEGMMRFREQVTETAGF 409 (497)
T ss_dssp CCCCTTTSHHHHHHHT---TCTTCCEEECCS-CTTHHHHTHHHHHTTCTTEEECCCCGGGCS-HHHHHHHHHHHHHHHCS
T ss_pred chHHHHHHHHHHHHHh---hcCCCCeEEEeC-CcchhHHHHHHHHccCCccccCCchhhccC-hHHHHHHHHHHHHhhch
Confidence 3456664 444433 455566666665 44 79999999999999999999999985 89999999999999999
Q ss_pred CcEE-EecCCCCCcccchh-hHHHHHHHHHHHHhhhhcCCCCChhHHHHHHHHHHHHhHHHHhcCCCCcc
Q 003194 318 KKVM-FSTDAYASPETYFL-GAKRAREVVFSVLRDTCIDEDLSVGEAIEVAKDIFALNAAQFYKINLGVK 385 (840)
Q Consensus 318 ~kil-fgSD~~~~Pe~~~~-~~~~~R~~l~~~l~~~v~~g~l~~~ea~~~~~~Il~~NA~rly~l~~~~~ 385 (840)
+|++ |+||+|+|+ +|+ +|++|||+||++|++||.++.|+.+||.+++++|+++||+|+|+|+..|.
T Consensus 410 skfvGmlTDsRsfl--Sy~~RheyfRRiLc~vLg~~V~~~~lse~eA~r~a~~l~~~Na~r~Y~l~~~~~ 477 (497)
T 2q01_A 410 YNTVGFNDDTRAFL--SIPARHDVARRVDSAFLARMVAEHRMDLVEAEELIVDLTYNLPKKAYKLDQRPD 477 (497)
T ss_dssp TTBCCCCCCCSCGG--GHHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHTHHHHHHTTCCSCCT
T ss_pred hcccccccchhHhh--hhhHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhHHHHhCCCCCcc
Confidence 9999 999999998 477 99999999999999999999999999999999999999999999998775
No 15
>2qee_A BH0493 protein; amidohydrolase, structural genomics, PSI-2, protein structure initiative; 1.65A {Bacillus halodurans c-125} PDB: 3hka_A* 2q6e_A 3hk5_A* 3hk7_A* 3hk8_A* 3hk9_A* 2q08_A* 2pnk_A*
Probab=100.00 E-value=9.9e-37 Score=335.64 Aligned_cols=337 Identities=15% Similarity=0.123 Sum_probs=246.1
Q ss_pred hHHHHHhccCCccccCCCCcccCC-CCcchhhh--------cc-c---cCCCCc-----------cCCCcch--hhhhHH
Q 003194 4 EELREVVENIELVDGHAHNIVSLD-SSFPFIQS--------FS-E---ATGPAL-----------SYAPYSL--SFKRNL 57 (840)
Q Consensus 4 ~~l~~~i~~~p~iD~H~H~~~~~~-~~~~~~~~--------~~-e---a~~~~~-----------~~~~~~~--~~~~~~ 57 (840)
.+|++.++++||||-|||-.-..- .+. |..+ .. + +.|-.- +..-++. .|.|..
T Consensus 13 ~~Ly~~a~~~PIiDyH~HL~P~~iae~~-f~ni~elwgdHYkw~r~mRa~Gv~e~~~iT~s~~ekA~~vgnplflyhW~h 91 (437)
T 2qee_A 13 EKVKNAVNNQPVTDMHTHLFSPNFGEIL-LWDIDELLTYHYLVAEVMRWTDVSIEAFWAMSKREQADLIWEELFIKRSPV 91 (437)
T ss_dssp HHHHHHHHHSCEEECSCSCCCGGGCTTS-BCSHHHHHTSHHHHHHHHTTCCSCHHHHHHSCHHHHHHHHHHHHHTSSCCC
T ss_pred HHHHHHHhcCCeeccccCCCHHHHHhcc-cCCHHhccccHHHHHHHHHHcCCCHHHhcCCCHHHHHHHhCCCcceeechh
Confidence 367888899999999999765320 111 2110 00 1 111000 0000222 455667
Q ss_pred HH--------HHhhhCCCC---CHHHHHHHHHH-cCcccHHHHHHhhCCeEEEEEecCCCCCCCCChH---HHHhhcc--
Q 003194 58 KN--------IAELYGCDS---SLQAVEEYRRA-AGLQSICSICFEAANISAVLIDDGLKLDKKHGLD---WHKSLVP-- 120 (840)
Q Consensus 58 ~~--------l~~~fg~~~---~~~~i~~~~~~-l~~~~~~r~ll~~~~v~~~~~d~g~~~d~~~~~~---~h~~~~~-- 120 (840)
+| |++ |||+. |+++ |+++++ ++.+.++|.+|+++||+++|| ||||+|+|+ ||+++-.
T Consensus 92 lEa~~~~~t~L~r-FGid~~~~ta~~-~~~~n~~l~~~~~~r~ll~~~nV~~v~T----TdDP~D~Le~~~~h~~~f~~~ 165 (437)
T 2qee_A 92 SEACRGVLTCLQG-LGLDPATRDLQV-YREYFAKKTSEEQVDTVLQLANVSDVVM----TNDPFDDNERISWLEGKQPDS 165 (437)
T ss_dssp SHHHHHHHHHHHH-TTCCGGGCCHHH-HHHHHHTCCHHHHHHHHHHHTTEEEEEC----CBCTTSHHHHHHHHTTCCCCT
T ss_pred hhcccchhHHHHH-cCCCCCccCHHH-HHHHHHHhCcccHHHHHHHHcCCeEEEe----CCCCCCchhhhHHHhhcCCCc
Confidence 77 999 99997 9999 999974 565555999999999999999 899999999 9999433
Q ss_pred ccceEEeccccH---HHHHHHhCCCC-Cc------ccHHHHHHHHHHHHHhhccccccceeeec--ccCCCCC-CCCCCH
Q 003194 121 FVGRILRIERLA---EEILDQASPDG-SI------WTLDVFIETFLKQLRSAANKIVGLKSIAA--YRSGLEI-NPHVTK 187 (840)
Q Consensus 121 ~~~~i~rie~~a---~~~~~~~~~~~-~~------~~~~~~~~al~~~l~~~~~~~vgfks~~~--y~~Gl~~-~p~~~~ 187 (840)
++...+|+.++. .+++++|++.| +| .+|+++++||++|. ++.|| .+|||+. ...++.
T Consensus 166 rv~Pa~RpD~~l~~f~~~v~~L~~sg~~i~~~~~~~t~~~~~~AL~~rF----------~~~Gc~~sDh~l~~~~~~~~~ 235 (437)
T 2qee_A 166 RFHAALRLDPLLNEYEQTKHRLRDWGYKVNDEWNEGSIQEVKRFLTDWI----------ERMDPVYMAVSLPPTFSFPEE 235 (437)
T ss_dssp TEECCEECHHHHHCHHHHHHHHHHTTCCCCSSCSHHHHHHHHHHHHHHH----------HHHCCSCEEEEECTTCCSSCS
T ss_pred eEeecCCchHHHhhHHHHHHHHHhcCCCcccCcccCCHHHHHHHHHHHH----------HHhCCEEEEecCCcCcCCCCC
Confidence 455667777754 26776766644 56 68999999999983 34455 4889874 222211
Q ss_pred HHHHHHHHHHHhCCCCCcCCchhhhhHHHHHHHHHHhhCCCcEEEeeCCC-CC------CCC-cCCcChhhhHHHHhhcC
Q 003194 188 KDAEEGLAEDLRSGKPVRITNKSLIDYIFISSLEVAQFLDLPLQIHTGFG-DK------DLD-LRLSNPLHLRAILEDKR 259 (840)
Q Consensus 188 ~ea~~~~~r~l~~~~~~~~~~~~l~d~~l~~l~e~~~e~glPvq~H~G~g-d~------~~~-~~~~~P~~L~~l~~~~~ 259 (840)
.+ ...+..+.+.++|+|+|||||+|+|.- +. +.| ...+++..|..++. +
T Consensus 236 ~~---------------------~~~~~~~~l~~~~~e~gwvmQlHiGa~Rn~n~~~~~g~D~i~~~~~~~L~~ll~--~ 292 (437)
T 2qee_A 236 SN---------------------RGRIIRDCLLPVAEKHNIPFAMMIGVKKRVHPALGDAGDFVGKASMDGVEHLLR--E 292 (437)
T ss_dssp SH---------------------HHHHHHHTHHHHHHHHTCCEEEEECEETTSSGGGGGGGCEECCCCSHHHHHHHH--H
T ss_pred CH---------------------HHHHHHHHHHHHHHhCCCeEEEecCcccCCCHHhccCCCCCCccCHHHHHHHHH--h
Confidence 11 133344448899999999999999983 11 222 12233356788888 7
Q ss_pred CCCcEEEEeCCCCchHHHHHHHHHhCCEeEecccccCCCCcHHHHHHHHHHHHHHCCCCcEE-EecCCCCCcccchhhHH
Q 003194 260 FSKCRFVLLHASYPFSKEASYLAYVYPQVYLDFGLAIPKLSVQGMISSIKELLELAPTKKVM-FSTDAYASPETYFLGAK 338 (840)
Q Consensus 260 ~P~l~~VllH~g~p~~~e~~~la~~~pNVyld~s~~~~~~~~~g~~~~l~~~le~~~~~kil-fgSD~~~~Pe~~~~~~~ 338 (840)
||+.+|...+.......+++.++++|||||++.+|||++. ++||+++++.+++..+ .+++ |.||+|+|.. ++++++
T Consensus 293 ~~~~~lpktiLn~~~n~elat~ag~Fpnvq~g~~WWF~d~-p~gm~~q~~~~l~lL~-~~fvGmlTDsRsfls-yi~Rhe 369 (437)
T 2qee_A 293 YPNNKFLVTMLSRENQHELVVLARKFSNLMIFGCWWFMNN-PEIINEMTRMRMEMLG-TSFIPQHSDARVLEQ-LIYKWH 369 (437)
T ss_dssp CTTSCEEEEESCGGGHHHHHHHHHHCTTEEEBCCCGGGCS-HHHHHHHHHHHHHHHT-TCSBCCCCCCSBTTH-HHHHHH
T ss_pred CcccCCCeeecChhhHHHHHHHHccCCcceecCcccccCC-HHHHHHHHHHHHHHhC-cCcccCccchhHHhc-cchHHH
Confidence 8887766666655567889999999999999999999885 8999999999988888 6655 9999999984 238999
Q ss_pred HHHHHHHHHHhhh----hcCCCCChhH--HHHHHHHHHHHhHHHHhcCCCCc
Q 003194 339 RAREVVFSVLRDT----CIDEDLSVGE--AIEVAKDIFALNAAQFYKINLGV 384 (840)
Q Consensus 339 ~~R~~l~~~l~~~----v~~g~l~~~e--a~~~~~~Il~~NA~rly~l~~~~ 384 (840)
+|||+||++|++| |++|.+| ++ .++++++|||+||+++|++..-.
T Consensus 370 yfRRilc~~Lg~~~~~lve~G~~p-d~~~l~~~v~~I~y~Na~~yf~~~~~~ 420 (437)
T 2qee_A 370 HSKSIIAEVLIDKYDDILQAGWEV-TEEEIKRDVADLFSRNFWRFVGRNDHV 420 (437)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCC-CHHHHHHHHHHHHTHHHHHHHTCC---
T ss_pred HHHHHHHHHHHHHHHhhhhCCCCC-CHHHHHHHHHHHHHHHHHHHhccccce
Confidence 9999999999999 9999999 55 56999999999999999987554
No 16
>3irs_A Uncharacterized protein BB4693; structural genomics, PSI-2, protein structure initiative, TI protein; HET: GOL; 1.76A {Bordetella bronchiseptica} PDB: 3k4w_A
Probab=99.77 E-value=1.2e-18 Score=188.26 Aligned_cols=191 Identities=20% Similarity=0.275 Sum_probs=139.3
Q ss_pred HhhccccccceeeecccCCCCCCCCCCHHHHHHHHHHHHhCC-CCCcC------CchhhhhHHHHHHHHHHhhCCCcEEE
Q 003194 160 RSAANKIVGLKSIAAYRSGLEINPHVTKKDAEEGLAEDLRSG-KPVRI------TNKSLIDYIFISSLEVAQFLDLPLQI 232 (840)
Q Consensus 160 ~~~~~~~vgfks~~~y~~Gl~~~p~~~~~ea~~~~~r~l~~~-~~~~~------~~~~l~d~~l~~l~e~~~e~glPvq~ 232 (840)
+.++++++||.+ +.|. +.+++.++++++...+ ++.++ ....+++..+.++|+.|+++|+||++
T Consensus 87 ~~~p~r~~~~~~---------v~p~-~~~~a~~eL~~~~~~g~~Gi~~~~~~~~~~~~~~d~~~~~~~~~a~e~glpv~i 156 (291)
T 3irs_A 87 KAYPDKFHPVGS---------IEAA-TRKEAMAQMQEILDLGIRIVNLEPGVWATPMHVDDRRLYPLYAFCEDNGIPVIM 156 (291)
T ss_dssp HHSTTTEEEEEE---------CCCS-SHHHHHHHHHHHHHTTCCCEEECGGGSSSCCCTTCGGGHHHHHHHHHTTCCEEE
T ss_pred HHCCCcEEEEEe---------cCcc-CHHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHcCCeEEE
Confidence 346778888887 6665 4566778888833322 22221 12346788899999999999999999
Q ss_pred eeCCCCCCCCcCCcChhhhHHHHhhcCCCCcEEEEeCCCCchHHHHHHHHHhCCEeEecccccCCCCcHHHHHHHHHHHH
Q 003194 233 HTGFGDKDLDLRLSNPLHLRAILEDKRFSKCRFVLLHASYPFSKEASYLAYVYPQVYLDFGLAIPKLSVQGMISSIKELL 312 (840)
Q Consensus 233 H~G~gd~~~~~~~~~P~~L~~l~~~~~~P~l~~VllH~g~p~~~e~~~la~~~pNVyld~s~~~~~~~~~g~~~~l~~~l 312 (840)
|+|... +.+..+++|..+.++++ +||+++||+.|+|+||..++..++..++|||+|+|+++... + +. ..+.+++
T Consensus 157 H~~~~~-~~~~~~~~p~~~~~v~~--~~P~l~ivl~H~G~~~~~~~~~l~~~~~nvy~~~Sg~~~~~-~-~~-~~~~~~~ 230 (291)
T 3irs_A 157 MTGGNA-GPDITYTNPEHIDRVLG--DFPDLTVVSSHGNWPWVQEIIHVAFRRPNLYLSPDMYLYNL-P-GH-ADFIQAA 230 (291)
T ss_dssp ECSSSC-SSSGGGGCHHHHHHHHH--HCTTCCEEEEGGGTTCHHHHHHHHHHCTTEEEECGGGGSSS-T-TH-HHHHHHH
T ss_pred eCCCCC-CCCCccCCHHHHHHHHH--HCCCCEEEeecCCcccHHHHHHHHhHCCCeEecHHHHhccC-C-CH-HHHHHHH
Confidence 998642 22455678888999999 89999999999999999988888889999999999986422 1 22 2456678
Q ss_pred HHCCCCcEEEecCCCCCcccchhhHHHHHHHHHHHHhhhhcCCCCChhHHHHHHHHHHHHhHHHHhcCCCCc
Q 003194 313 ELAPTKKVMFSTDAYASPETYFLGAKRAREVVFSVLRDTCIDEDLSVGEAIEVAKDIFALNAAQFYKINLGV 384 (840)
Q Consensus 313 e~~~~~kilfgSD~~~~Pe~~~~~~~~~R~~l~~~l~~~v~~g~l~~~ea~~~~~~Il~~NA~rly~l~~~~ 384 (840)
+..|.+||||||| ||.... . ..+ +.+.+ -.++. +.+++|+++||+|||+++...
T Consensus 231 ~~~g~drllfgSD---~P~~~~---~---~~~-~~~~~----l~l~~----e~~~~i~~~NA~rl~~~~~~~ 284 (291)
T 3irs_A 231 NSFLADRMLFGTA---YPMCPL---K---EYT-EWFLT----LPIKP----DAMEKILHGNAERLLAQAGRE 284 (291)
T ss_dssp TTGGGGTBCCCCC---BTSSCH---H---HHH-HHHHT----SSCCH----HHHHHHHTHHHHHHHHHSCC-
T ss_pred HHhCcceEEEecC---CCCCCH---H---HHH-HHHHH----CCCCH----HHHHHHHHHHHHHHhCccccc
Confidence 8899999999999 774321 1 111 11222 14553 689999999999999986543
No 17
>3ij6_A Uncharacterized metal-dependent hydrolase; structural genomics, amidohydrolase, PSI-2, protein structure initiative; 2.00A {Lactobacillus acidophilus}
Probab=99.72 E-value=1.1e-17 Score=182.29 Aligned_cols=191 Identities=18% Similarity=0.212 Sum_probs=130.8
Q ss_pred HHHHhhccccc-cceeeecccCCCCCCCCCCHHHHHHHHHHHHhCC--CCCc----CCchhhhhHHHHHHHHHHhhCCCc
Q 003194 157 KQLRSAANKIV-GLKSIAAYRSGLEINPHVTKKDAEEGLAEDLRSG--KPVR----ITNKSLIDYIFISSLEVAQFLDLP 229 (840)
Q Consensus 157 ~~l~~~~~~~v-gfks~~~y~~Gl~~~p~~~~~ea~~~~~r~l~~~--~~~~----~~~~~l~d~~l~~l~e~~~e~glP 229 (840)
+.++.++++++ ||.. +++. +++++.++++|+++.. ++.+ .....++|..+.|+|+.|+++|+|
T Consensus 88 ~~~~~~p~rf~g~~a~---------vp~~-~~~~a~~el~r~~~~~G~~Gv~l~~~~~~~~l~d~~~~p~~~~~~e~g~p 157 (312)
T 3ij6_A 88 NLVDQHPGKFAGAVAI---------LPMN-NIESACKVISSIKDDENLVGAQIFTRHLGKSIADKEFRPVLAQAAKLHVP 157 (312)
T ss_dssp HHHHHCTTTEEEEEEE---------CCTT-CHHHHHHHHHHHHHCTTEEEEEEESEETTEETTSTTTHHHHHHHHHTTCC
T ss_pred HHHHhCCCceeeeEEe---------cCcc-CHHHHHHHHHHHHHhCCCceEeccCCCCCCCCCCccHHHHHHHHHHcCCe
Confidence 34446788888 6877 5443 6788999999998642 2222 234567888999999999999999
Q ss_pred EEEeeCCCCCCCCcC--Cc----C-----hhhhHHHHhhcCCCCcEEEEeCCC--CchHHHHHH------HHHhCCEeEe
Q 003194 230 LQIHTGFGDKDLDLR--LS----N-----PLHLRAILEDKRFSKCRFVLLHAS--YPFSKEASY------LAYVYPQVYL 290 (840)
Q Consensus 230 vq~H~G~gd~~~~~~--~~----~-----P~~L~~l~~~~~~P~l~~VllH~g--~p~~~e~~~------la~~~pNVyl 290 (840)
|++|+|.+....+.. .. . ++.+.++++ +||+++||+.|+| .||..+... .+..++|||+
T Consensus 158 v~iH~g~~~~~p~~~~~~~~~~~~~~~~~~li~~gv~~--rfP~Lkii~~H~Gg~~P~~~~r~~~~~~~~~~~~~~nvy~ 235 (312)
T 3ij6_A 158 LWMHPVFDARKPDNNLVFSWEYELSQAMLQLVQSDLFQ--DYPNLKILVHHAGAMVPFFSGRIDHILDEKHAQDFKKFYV 235 (312)
T ss_dssp EEEECCCCTTSSSCCTTTHHHHHHHHHHHHHHHTTHHH--HCTTCCEEESGGGTTTTTSHHHHHHHSCHHHHHHGGGCEE
T ss_pred EEEcCCCCCCCCCcccccccHHHHHHHHHHHHHcChHh--hCCCCeEEecCCcccHHHHHHHHHHhcccchHHHcCeEEE
Confidence 999998642211100 00 1 123357888 9999999999997 577655432 3456799999
Q ss_pred cccccCCCCcHHHHHHHHHHHHHHCCCCcEEEecCCCCCcccchhh--HHHHHHHHHHHHhhhhcCCCCChhHHHHHHHH
Q 003194 291 DFGLAIPKLSVQGMISSIKELLELAPTKKVMFSTDAYASPETYFLG--AKRAREVVFSVLRDTCIDEDLSVGEAIEVAKD 368 (840)
Q Consensus 291 d~s~~~~~~~~~g~~~~l~~~le~~~~~kilfgSD~~~~Pe~~~~~--~~~~R~~l~~~l~~~v~~g~l~~~ea~~~~~~ 368 (840)
|+|+.+. ...++.+++..|.+||||||| ||...++. .....+.+ ++-.++. +.+++
T Consensus 236 dts~~~~-------~~~l~~~~~~~g~drilfgSD---~P~~~~p~~~~~~~~~~l--------~~l~l~~----~~~~~ 293 (312)
T 3ij6_A 236 DTAILGN-------TPALQLAIDYYGIDHVLFGTD---APFAVMPSGADQIITQAI--------NDLTISD----KDKQK 293 (312)
T ss_dssp ECCSSSC-------HHHHHHHHHHHCGGGEECCCC---BTSSSTTTCSHHHHHHHH--------HTSSSCH----HHHHH
T ss_pred eCCCCCC-------HHHHHHHHHhCCCCeEEEeCC---CCCCcCCCcchHHHHHHH--------HHcCCCH----HHHHH
Confidence 9997642 235778888899999999999 77432221 11122222 2223553 68999
Q ss_pred HHHHhHHHHhcCC
Q 003194 369 IFALNAAQFYKIN 381 (840)
Q Consensus 369 Il~~NA~rly~l~ 381 (840)
|+++||+|+|+-+
T Consensus 294 i~~~NA~rl~~~~ 306 (312)
T 3ij6_A 294 IFHDNYYSLIKEG 306 (312)
T ss_dssp HHTHHHHHHHCC-
T ss_pred HHHHHHHHHHhCc
Confidence 9999999999854
No 18
>4inf_A Metal-dependent hydrolase; amidohydrolase, metal binding site, enzyme functi initiative, EFI; 1.48A {Novosphingobium aromaticivorans} PDB: 4ing_A*
Probab=99.70 E-value=3.4e-17 Score=182.43 Aligned_cols=188 Identities=17% Similarity=0.233 Sum_probs=131.0
Q ss_pred HHHHHhhccccccceeeecccCCCCCCCCCCHHHHHHHHHHHHhC-C-CCCc----CCchhhhhHHHHHHHHHHhhCCCc
Q 003194 156 LKQLRSAANKIVGLKSIAAYRSGLEINPHVTKKDAEEGLAEDLRS-G-KPVR----ITNKSLIDYIFISSLEVAQFLDLP 229 (840)
Q Consensus 156 ~~~l~~~~~~~vgfks~~~y~~Gl~~~p~~~~~ea~~~~~r~l~~-~-~~~~----~~~~~l~d~~l~~l~e~~~e~glP 229 (840)
.+.++.+++++.||.+ +++. +++++.++++|++.. | ++.+ .....++|..++|+|+.|+++|+|
T Consensus 137 ~~~~~~~P~Rf~g~a~---------v~~~-~~~~a~~EL~r~~~~~G~~Gv~l~~~~~g~~l~d~~~~pi~~~~~e~g~p 206 (373)
T 4inf_A 137 ADACQKYPDRFIGMGT---------VAPQ-DPEWSAREIHRGARELGFKGIQINSHTQGRYLDEEFFDPIFRALVEVDQP 206 (373)
T ss_dssp HHHHHHSTTTEEECBC---------CCTT-SHHHHHHHHHHHHHTSCCCCEEECSCBTTBCTTSGGGHHHHHHHHHHTCC
T ss_pred HHHHHhCCCEEEEEEe---------cCCC-CHHHHHHHHHHHHhhcCceEEEECCCCCCCCCCCcchHHHHHHHHHcCCe
Confidence 3345567889999988 6655 677788999999975 3 3322 234567888999999999999999
Q ss_pred EEEeeCCCCCCCCc-----CCc--------------ChhhhHHHHhhcCCCCcEEEEeCCC--CchHHHHHHHHH-----
Q 003194 230 LQIHTGFGDKDLDL-----RLS--------------NPLHLRAILEDKRFSKCRFVLLHAS--YPFSKEASYLAY----- 283 (840)
Q Consensus 230 vq~H~G~gd~~~~~-----~~~--------------~P~~L~~l~~~~~~P~l~~VllH~g--~p~~~e~~~la~----- 283 (840)
|++|+|.+...... ... ..+.+.++++ +||+++||+.|+| .||..+....+.
T Consensus 207 V~iH~g~~~~~~~~p~~~~~~~~~~~g~~~et~~~~~~Li~~gv~~--rfP~LkiilaH~Gg~~P~~l~Rld~~~~~~~~ 284 (373)
T 4inf_A 207 LYIHPATSPDSMIDPMLEAGLDGAIFGFGVETGMHLLRLITIGIFD--KYPSLQIMVGHMGEALPYWLYRLDYMHQAGVR 284 (373)
T ss_dssp EEECCCCCCTTTCHHHHHHTCSSTTTHHHHHHHHHHHHHHHHTHHH--HCTTCCEEECHHHHTTTTTHHHHHHHHHHHHH
T ss_pred EEECCCCCCccccccccccccchhhhhhHHHHHHHHHHHHHcCchh--hCcCCeEEEecccchHHHHHHHHHHHHhhccc
Confidence 99999975322100 000 0124567888 9999999999997 687543322111
Q ss_pred -----------------hCCEeEecccccCCCCcHHHHHHHHHHHHHHCCCCcEEEecCCCCCcccchhhHHHHHHHHHH
Q 003194 284 -----------------VYPQVYLDFGLAIPKLSVQGMISSIKELLELAPTKKVMFSTDAYASPETYFLGAKRAREVVFS 346 (840)
Q Consensus 284 -----------------~~pNVyld~s~~~~~~~~~g~~~~l~~~le~~~~~kilfgSD~~~~Pe~~~~~~~~~R~~l~~ 346 (840)
..+|||+|+|+++. ...++.+++..|.+||||||| ||.. .... ..+.
T Consensus 285 ~~~~~~~~~l~~~pse~~~~nvy~d~sg~~~-------~~~l~~~~~~~g~drilfgSD---~P~~--~~~~-~~~~--- 348 (373)
T 4inf_A 285 SQRYERMKPLKKTIEGYLKSNVLVTNSGVAW-------EPAIKFCQQVMGEDRVMYAMD---YPYQ--YVAD-EVRA--- 348 (373)
T ss_dssp HTCCTTCCCCSSCHHHHHHHTEEEECTTCCC-------HHHHHHHHHHHCGGGEECCCC---TTTT--CCHH-HHHH---
T ss_pred cccccccccccCCHHHHHhcCeEEeeccccc-------HHHHHHHHHHcCcceEEEecC---CCCC--ccHH-HHHH---
Confidence 13699999998752 246778888999999999999 7732 2221 1122
Q ss_pred HHhhhhcCCCCChhHHHHHHHHHHHHhHHHHhcC
Q 003194 347 VLRDTCIDEDLSVGEAIEVAKDIFALNAAQFYKI 380 (840)
Q Consensus 347 ~l~~~v~~g~l~~~ea~~~~~~Il~~NA~rly~l 380 (840)
++...++. +.+++|+++||+|||+|
T Consensus 349 -----l~~~~l~~----e~~~~I~~~NA~rlf~L 373 (373)
T 4inf_A 349 -----MDAMDMSA----QTKKKFFQTNAEKWFKL 373 (373)
T ss_dssp -----HHTCSCCH----HHHHHHHTHHHHHHTTC
T ss_pred -----HHhCCCCH----HHHHHHHhHHHHHHhCc
Confidence 22224553 68999999999999986
No 19
>3nur_A Amidohydrolase; TIM barrel; 1.75A {Staphylococcus aureus}
Probab=99.66 E-value=8.3e-17 Score=178.44 Aligned_cols=189 Identities=17% Similarity=0.193 Sum_probs=129.8
Q ss_pred HHHHhhccccccceeeecccCCCCCCCCCCHHHHHHHHHHHHhC-C-CCCc----CCchhhhhHHHHHHHHHHhhCCCcE
Q 003194 157 KQLRSAANKIVGLKSIAAYRSGLEINPHVTKKDAEEGLAEDLRS-G-KPVR----ITNKSLIDYIFISSLEVAQFLDLPL 230 (840)
Q Consensus 157 ~~l~~~~~~~vgfks~~~y~~Gl~~~p~~~~~ea~~~~~r~l~~-~-~~~~----~~~~~l~d~~l~~l~e~~~e~glPv 230 (840)
+.++.+++++.||.+ +++. +++++.++++|++.. | ++.+ .....++|..++|+|+.|+++|+||
T Consensus 120 ~~~~~~P~Rf~g~a~---------v~~~-~~~~a~~El~r~~~~~G~~Gv~l~~~~~~~~~~d~~~~p~~~~~~e~g~pV 189 (357)
T 3nur_A 120 NYIAQYPNRFVGFAT---------LPIN-EPEAAAREFERCINDLGFKGALIMGRAQDGFLDQDKYDIIFKTAENLDVPI 189 (357)
T ss_dssp HHHHHSTTTEEECBC---------CCTT-SHHHHHHHHHHHHHTTCCCCEEEESCBTTBCTTSGGGHHHHHHHHHHTCCE
T ss_pred HHHHhCCCEEEEEEe---------CCCC-CHHHHHHHHHHHHhhcCceEEEeCCCCCCCCCCCccHHHHHHHHHhcCCeE
Confidence 344567889999988 6554 677889999999863 2 2322 2345678889999999999999999
Q ss_pred EEeeCCCCCC-C----CcCCc----------------------ChhhhHHHHhhcCCCCcEEEEeCCC--CchHHHHHHH
Q 003194 231 QIHTGFGDKD-L----DLRLS----------------------NPLHLRAILEDKRFSKCRFVLLHAS--YPFSKEASYL 281 (840)
Q Consensus 231 q~H~G~gd~~-~----~~~~~----------------------~P~~L~~l~~~~~~P~l~~VllH~g--~p~~~e~~~l 281 (840)
++|+|.+... . ...+. .++.+.++++ +||+++||+.|+| .||..+....
T Consensus 190 ~iH~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~t~~~~~~li~~gv~~--rfP~LkiilaH~Gg~~P~~~~rld~ 267 (357)
T 3nur_A 190 YLHPAPVNSDIYQSYYKGNYPEVTAATFACFGYGWHIDVGIHAIHLVLSGIFD--RYPKLNMIIGHWGEFIPFFLERMDE 267 (357)
T ss_dssp EEECCCCCHHHHHHHTCCSSCHHHHHHHHTTTTHHHHHHHHHHHHHHHTTHHH--HSTTCCEEECGGGTTGGGGHHHHHH
T ss_pred EEecCCCCccccccccccCcccchhhhhhhhhhchhHHHHHHHHHHHHcCchh--hCCCCeEEEecccccHHHHHHHHHh
Confidence 9999875211 0 00000 1134667788 9999999999997 6876544332
Q ss_pred HH------------hCCEeEecccccCCCCcHHHHHHHHHHHHHHCCCCcEEEecCCCCCcccchhhHHHHHHHHHHHHh
Q 003194 282 AY------------VYPQVYLDFGLAIPKLSVQGMISSIKELLELAPTKKVMFSTDAYASPETYFLGAKRAREVVFSVLR 349 (840)
Q Consensus 282 a~------------~~pNVyld~s~~~~~~~~~g~~~~l~~~le~~~~~kilfgSD~~~~Pe~~~~~~~~~R~~l~~~l~ 349 (840)
+. ..+|||+|+|+++. . ..++.+++..|.+||||||| ||... ... ..
T Consensus 268 ~~~~~~l~~~ps~~~~~nvy~~~sg~~~---~----~~l~~~~~~~g~drilfgSD---~P~~~--~~~-~~-------- 326 (357)
T 3nur_A 268 ALFAEHLNHSVSYYFKNSFYITPSGMLT---K----PQFDLVKKEVGIDRILYAAD---YPYIE--PEK-LG-------- 326 (357)
T ss_dssp HSCCTTSSSCHHHHHHHSEEECCTTCCC---H----HHHHHHHHHHCGGGBCBCCC---TTTCC--CTT-HH--------
T ss_pred hhccccccCCHHHHHHhceeeecccCCC---H----HHHHHHHHHcCCceEEEeCC---CCCCC--chH-HH--------
Confidence 21 12699999998753 1 35677888899999999999 77322 111 11
Q ss_pred hhhcCCCCChhHHHHHHHHHHHHhHHHHhcCCC
Q 003194 350 DTCIDEDLSVGEAIEVAKDIFALNAAQFYKINL 382 (840)
Q Consensus 350 ~~v~~g~l~~~ea~~~~~~Il~~NA~rly~l~~ 382 (840)
++++.-.++. +.+++|+++||+|||+|+.
T Consensus 327 ~~~~~~~l~~----~~~~~i~~~NA~rl~~l~~ 355 (357)
T 3nur_A 327 VFLDELGLTD----EEKEKISYTNGAKLLGLSS 355 (357)
T ss_dssp HHTTSSCCCH----HHHHHHHTHHHHHHHTC--
T ss_pred HHHHHcCCCH----HHHHHHHhHHHHHHhCCCC
Confidence 2222224553 6899999999999999863
No 20
>3cjp_A Predicted amidohydrolase, dihydroorotase family; structural genomics, protein structure initiative; 1.85A {Clostridium acetobutylicum atcc 824}
Probab=99.63 E-value=2.7e-15 Score=159.77 Aligned_cols=179 Identities=18% Similarity=0.172 Sum_probs=127.2
Q ss_pred HhhccccccceeeecccCCCCCCCCCCHHHHHHHHHHHHhCCC--CC---cCCchhhhhHHHHHHHHHHhhC-CCcEEEe
Q 003194 160 RSAANKIVGLKSIAAYRSGLEINPHVTKKDAEEGLAEDLRSGK--PV---RITNKSLIDYIFISSLEVAQFL-DLPLQIH 233 (840)
Q Consensus 160 ~~~~~~~vgfks~~~y~~Gl~~~p~~~~~ea~~~~~r~l~~~~--~~---~~~~~~l~d~~l~~l~e~~~e~-glPvq~H 233 (840)
+.++++++||.. +++....+++.+++++++...+ +. .++. . .+..+.++++.|+++ |+||++|
T Consensus 82 ~~~p~~~~~~g~---------~p~~~~~~~~~~el~~~~~~~g~~gi~~~g~~~-~-~~~~~~~~~~~a~~~~~lpv~iH 150 (272)
T 3cjp_A 82 QAYPSRYVGFGN---------VPVGLSENDTNSYIEENIVNNKLVGIGELTPAS-G-QIKSLKPIFKYSMDSGSLPIWIH 150 (272)
T ss_dssp HHSTTTEEEEEC---------CCTTCCHHHHHHHHHHHTTTTTCSEEEEECCCT-T-CGGGGHHHHHHHHHTTCCCEEEC
T ss_pred HhCCCeEEEEEE---------eCCCCCcHHHHHHHHHHHHhcCceEEEecCCCC-C-ccHHHHHHHHHHHhccCCcEEEe
Confidence 345677777765 4443333567788888875321 11 1222 3 667899999999999 9999999
Q ss_pred eCCCCCCCCcCCcChhhhHHHHhhcCCCCcEEEEeCCCCchHHHHHHHHHhCCEeEecccccCCCCcHHHHHHHHHHHHH
Q 003194 234 TGFGDKDLDLRLSNPLHLRAILEDKRFSKCRFVLLHASYPFSKEASYLAYVYPQVYLDFGLAIPKLSVQGMISSIKELLE 313 (840)
Q Consensus 234 ~G~gd~~~~~~~~~P~~L~~l~~~~~~P~l~~VllH~g~p~~~e~~~la~~~pNVyld~s~~~~~~~~~g~~~~l~~~le 313 (840)
++.+. ....+..+.++++ +||+++||+.|+|.+++.++..++..++|||+|+|+.+.. ..++.+++
T Consensus 151 ~~~~~-----~~~~~~~~~~~l~--~~p~l~iv~~H~G~~~~~~~~~~~~~~~~~y~~~s~~~~~-------~~~~~~~~ 216 (272)
T 3cjp_A 151 AFNPL-----VLQDIKEIAELCK--AFPKVPVILGHMGGSNWMTAVELAKEIQNLYLDTSAYFST-------FVLKIVIN 216 (272)
T ss_dssp CSTTC-----CHHHHHHHHHHHH--HSTTSCEEEGGGGGGGHHHHHHHHHHCTTEEEECTTCSCH-------HHHHHHHH
T ss_pred CCCCC-----ccccHHHHHHHHH--HCCCceEEEECCCCccHHHHHHHHHhCCCEEEEecccccH-------HHHHHHHH
Confidence 98531 1123557888998 8999999999999887777778888889999999987632 35678888
Q ss_pred HCCCCcEEEecCCCCCcccchhhHHHHHHHHHHHHhhhhcCCCCChhHHHHHHHHHHHHhHHHHhcCCC
Q 003194 314 LAPTKKVMFSTDAYASPETYFLGAKRAREVVFSVLRDTCIDEDLSVGEAIEVAKDIFALNAAQFYKINL 382 (840)
Q Consensus 314 ~~~~~kilfgSD~~~~Pe~~~~~~~~~R~~l~~~l~~~v~~g~l~~~ea~~~~~~Il~~NA~rly~l~~ 382 (840)
..| +||||||| ||... ....++.+. + ..++. +.+++|+++||+|||+++.
T Consensus 217 ~~~-dril~gSD---~P~~~---~~~~~~~~~----~----~~l~~----~~~~~i~~~Na~rl~~l~~ 266 (272)
T 3cjp_A 217 ELP-LKCIFGTD---MPFGD---LQLSIEAIK----K----MSNDS----YVANAVLGDNISRLLNIEG 266 (272)
T ss_dssp HST-TTEECCCC---TTSSC---HHHHHHHHH----H----HCSSH----HHHHHHHTHHHHHHHTC--
T ss_pred hCC-CeEEEeCC---CCCCC---hHHHHHHHH----h----cCCCH----HHHHHHHHHHHHHHhCccC
Confidence 888 99999999 67321 222333332 1 14553 6899999999999999864
No 21
>2dvt_A Thermophilic reversible gamma-resorcylate decarbo; TIM barrel, lyase; 1.70A {Rhizobium SP} SCOP: c.1.9.15 PDB: 2dvu_A* 2dvx_A* 3s4t_A*
Probab=99.61 E-value=1.7e-15 Score=165.44 Aligned_cols=186 Identities=12% Similarity=0.107 Sum_probs=125.1
Q ss_pred HHhhccccccceeeecccCCCCCCCCCCHHHHHHHHHHHHhC-C-CCCc----CC------chhhhhHHHHHHHHHHhhC
Q 003194 159 LRSAANKIVGLKSIAAYRSGLEINPHVTKKDAEEGLAEDLRS-G-KPVR----IT------NKSLIDYIFISSLEVAQFL 226 (840)
Q Consensus 159 l~~~~~~~vgfks~~~y~~Gl~~~p~~~~~ea~~~~~r~l~~-~-~~~~----~~------~~~l~d~~l~~l~e~~~e~ 226 (840)
.+.++++++||.+ +.|. +++++.++++++++. + ++.+ .. ...+.+..+.++++.|+++
T Consensus 88 ~~~~p~r~~~~~~---------v~p~-~~~~~~~el~~~~~~~g~~gi~i~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 157 (327)
T 2dvt_A 88 CAKRPDRFLAFAA---------LPLQ-DPDAATEELQRCVNDLGFVGALVNGFSQEGDGQTPLYYDLPQYRPFWGEVEKL 157 (327)
T ss_dssp HHHCTTTEEEEEC---------CCTT-SHHHHHHHHHHHHHTTCCCEEEEESSBCCTTCCSCBCTTSGGGHHHHHHHHHH
T ss_pred HhhCCCceEEEee---------cCcC-CHHHHHHHHHHHHhcCCceEEEECCCCCCCcccCCCCCCCcchHHHHHHHHHc
Confidence 3456777888776 5555 566788899999864 2 1111 11 3467788999999999999
Q ss_pred CCcEEEeeCCCCCCCC-----cC--Cc-------------ChhhhHHHHhhcCCCCcEEEEeCCC--CchHHHHHHH---
Q 003194 227 DLPLQIHTGFGDKDLD-----LR--LS-------------NPLHLRAILEDKRFSKCRFVLLHAS--YPFSKEASYL--- 281 (840)
Q Consensus 227 glPvq~H~G~gd~~~~-----~~--~~-------------~P~~L~~l~~~~~~P~l~~VllH~g--~p~~~e~~~l--- 281 (840)
|+||++|++....+.. .+ .. .++.+.++++ +||+++||+.|+| +|+..+....
T Consensus 158 ~lpv~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~--~~P~l~~v~~H~gg~~p~~~~~~~~~~~ 235 (327)
T 2dvt_A 158 DVPFYLHPRNPLPQDSRIYDGHPWLLGPTWAFAQETAVHALRLMASGLFD--EHPRLNIILGHMGEGLPYMMWRIDHRNA 235 (327)
T ss_dssp TCCEEEECCCCCGGGCGGGTTCGGGSGGGTHHHHHHHHHHHHHHHTTHHH--HCTTCCEEESGGGTTHHHHHHHHHHTTT
T ss_pred CCeEEECCCCCCcchhhhhccchhhhcccccccHHHHHHHHHHHHcCcHh--hCCCCeEEEecccccHHHHHHHHHhhhh
Confidence 9999999975321100 00 00 1223557888 8999999999997 4654332221
Q ss_pred -------------HHh--CCEeEecccccCCCCcHHHHHHHHHHHHHHCCCCcEEEecCCCCCcccchhhHHHHHHHHHH
Q 003194 282 -------------AYV--YPQVYLDFGLAIPKLSVQGMISSIKELLELAPTKKVMFSTDAYASPETYFLGAKRAREVVFS 346 (840)
Q Consensus 282 -------------a~~--~pNVyld~s~~~~~~~~~g~~~~l~~~le~~~~~kilfgSD~~~~Pe~~~~~~~~~R~~l~~ 346 (840)
+.. .+|||+|+|+.+. ...++.+++..|.+||||||| ||... .....+.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~n~y~~~sg~~~-------~~~~~~~~~~~g~dril~gSD---~P~~~---~~~~~~~--- 299 (327)
T 2dvt_A 236 WVKLPPRYPAKRRFMDYFNENFHITTSGNFR-------TQTLIDAILEIGADRILFSTD---WPFEN---IDHASDW--- 299 (327)
T ss_dssp TCCSCCSSSCSSCHHHHHHHHEEEECTTCCC-------HHHHHHHHTTTCGGGEECCCC---TTTSC---HHHHHHH---
T ss_pred hccccccCCCCCCHHHHHhhcEEEeccCCCC-------HHHHHHHHHHhCcccEEEecC---CCCcc---HHHHHHH---
Confidence 112 2799999998652 246788899999999999999 77322 1111122
Q ss_pred HHhhhhcCCCCChhHHHHHHHHHHHHhHHHHhcCC
Q 003194 347 VLRDTCIDEDLSVGEAIEVAKDIFALNAAQFYKIN 381 (840)
Q Consensus 347 ~l~~~v~~g~l~~~ea~~~~~~Il~~NA~rly~l~ 381 (840)
+.+ -.++. +.+++|+++||+|||+++
T Consensus 300 -~~~----~~l~~----~~~~~i~~~Na~rl~~l~ 325 (327)
T 2dvt_A 300 -FNA----TSIAE----ADRVKIGRTNARRLFKLD 325 (327)
T ss_dssp -HHH----SSSCH----HHHHHHHTHHHHHHTTCC
T ss_pred -HHH----CCCCH----HHHHHHHHHhHHHHhCCC
Confidence 222 14553 689999999999999985
No 22
>2ffi_A 2-pyrone-4,6-dicarboxylic acid hydrolase, putativ; TIM-barrel protein., structural genomics, PSI, protein struc initiative; 2.61A {Pseudomonas putida} SCOP: c.1.9.15
Probab=99.59 E-value=9.8e-15 Score=156.60 Aligned_cols=182 Identities=17% Similarity=0.145 Sum_probs=121.6
Q ss_pred hhccccccceeeecccCCCCCCCCCCHHHHHHHHHHHHhCC-CCCc----CC-chhhhhHHHHHHHHHHhhCCCcEEEee
Q 003194 161 SAANKIVGLKSIAAYRSGLEINPHVTKKDAEEGLAEDLRSG-KPVR----IT-NKSLIDYIFISSLEVAQFLDLPLQIHT 234 (840)
Q Consensus 161 ~~~~~~vgfks~~~y~~Gl~~~p~~~~~ea~~~~~r~l~~~-~~~~----~~-~~~l~d~~l~~l~e~~~e~glPvq~H~ 234 (840)
.+++++.||.. +.|... .++++++.+.+ ++.+ .. ...+.+..+.++++.|+++|+||.+|+
T Consensus 78 ~~p~r~~~~~~---------v~p~~~----~~el~~~~~~g~~Gi~~~~~~~~~~~~~~~~~~~~~~~a~~~~lpv~iH~ 144 (288)
T 2ffi_A 78 TVPGQLRGVVM---------LERDVE----QATLAEMARLGVRGVRLNLMGQDMPDLTGAQWRPLLERIGEQGWHVELHR 144 (288)
T ss_dssp HSTTTBCCBBC---------CCSSCC----HHHHHHHHTTTCCEEECCCSSSCCCCTTSTTTHHHHHHHHHHTCEEEECS
T ss_pred HCCCCEEEEEE---------eCCCCC----HHHHHHHHHCCCeEEEEecccCCCCCcccHHHHHHHHHHHHCCCeEEEee
Confidence 45667777765 445422 24556665532 1111 11 246778889999999999999999999
Q ss_pred CCCCCCCCcCCcChhhhHHHHhhcCCCCcEEEEeCCCCch---------HHHHHHHHHhCCEeEecccccCCCCcH----
Q 003194 235 GFGDKDLDLRLSNPLHLRAILEDKRFSKCRFVLLHASYPF---------SKEASYLAYVYPQVYLDFGLAIPKLSV---- 301 (840)
Q Consensus 235 G~gd~~~~~~~~~P~~L~~l~~~~~~P~l~~VllH~g~p~---------~~e~~~la~~~pNVyld~s~~~~~~~~---- 301 (840)
+.. .+..+.++++ +|| ++||+.|+|.++ ..++..+ ..+||||+++|+++.....
T Consensus 145 ~~~---------~~~~~~~~~~--~~p-l~~vi~H~g~~~~~~~~~~~~~~~~~~l-~~~~n~y~~~sg~~~~~~~~~~~ 211 (288)
T 2ffi_A 145 QVA---------DIPVLVRALQ--PYG-LDIVIDHFGRPDARRGLGQPGFAELLTL-SGRGKVWVKVSGIYRLQGSPEEN 211 (288)
T ss_dssp CTT---------THHHHHHHHT--TTT-CCEEESGGGSCCTTSCTTCTTHHHHTTC-CCCSCEEEEEECGGGSSSCHHHH
T ss_pred chh---------hHHHHHHHHH--HCC-CCEEEECCCCCCCCCCCCChhHHHHHHH-HhCCCEEEEeCcchhhccccCCC
Confidence 843 2446788898 899 999999998765 3443333 3579999999987643211
Q ss_pred -HHHHHHHHHHHHHCCCCcEEEecCCCCCcccch---hhHHHHHHHHHHHHhhhhcCCCCChhHHHHHHHHHHHHhHHHH
Q 003194 302 -QGMISSIKELLELAPTKKVMFSTDAYASPETYF---LGAKRAREVVFSVLRDTCIDEDLSVGEAIEVAKDIFALNAAQF 377 (840)
Q Consensus 302 -~g~~~~l~~~le~~~~~kilfgSD~~~~Pe~~~---~~~~~~R~~l~~~l~~~v~~g~l~~~ea~~~~~~Il~~NA~rl 377 (840)
......++.+++..|.+||||||| ||.... .......+.+ .++ .++. +.+++|+++||+||
T Consensus 212 ~~~~~~~~~~~~~~~g~drll~gSD---~P~~~~~~~~~~~~~~~~~----~~~----~~~~----~~~~~i~~~NA~rl 276 (288)
T 2ffi_A 212 LAFARQALCALEAHYGAERLMWGSD---WPHTQHESEVSFGSAVEQF----EAL----GCSA----QLRQALLLDTARAL 276 (288)
T ss_dssp HHHHHHHHHHHHHHTCGGGEEEECC---TTCTTCTTTCCHHHHHHHH----HHH----CCCH----HHHHHHHTHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCceEEecC---CCCCCCCCCCCHHHHHHHH----HHH----CCCH----HHHHHHHHHCHHHH
Confidence 122357889999999999999999 563211 0111122222 222 2343 68999999999999
Q ss_pred hcCCCC
Q 003194 378 YKINLG 383 (840)
Q Consensus 378 y~l~~~ 383 (840)
|+++..
T Consensus 277 ~~l~~~ 282 (288)
T 2ffi_A 277 FGFELE 282 (288)
T ss_dssp TTCCCC
T ss_pred hCcccc
Confidence 998754
No 23
>2f6k_A Metal-dependent hydrolase; metal dependent hydrolyse, aminohydro_2, ACMDS, ACMS, trypto metabolism, quinolinic acid, QUIN; 2.50A {Lactobacillus plantarum} SCOP: c.1.9.15
Probab=99.57 E-value=6.8e-15 Score=159.14 Aligned_cols=188 Identities=16% Similarity=0.195 Sum_probs=123.2
Q ss_pred HhhccccccceeeecccCCCCCCCCCCHHHHHHHHHHHHhC-C-CCCcC----CchhhhhHHHHHHHHHHhhCCCcEEEe
Q 003194 160 RSAANKIVGLKSIAAYRSGLEINPHVTKKDAEEGLAEDLRS-G-KPVRI----TNKSLIDYIFISSLEVAQFLDLPLQIH 233 (840)
Q Consensus 160 ~~~~~~~vgfks~~~y~~Gl~~~p~~~~~ea~~~~~r~l~~-~-~~~~~----~~~~l~d~~l~~l~e~~~e~glPvq~H 233 (840)
+.+++++.||.. +++. +.+++.++++++++. + .+..+ ....+.+..+.++++.|+++|+||++|
T Consensus 85 ~~~p~r~~~~~~---------~p~~-~~~~~~~el~~~~~~~g~~gi~~~~~~~~~~~~~~~~~~~~~~a~~~~lpv~iH 154 (307)
T 2f6k_A 85 QQYPDQLGYLAS---------LPIP-YELDAVKTVQQALDQDGALGVTVPTNSRGLYFGSPVLERVYQELDARQAIVALH 154 (307)
T ss_dssp HHCTTTEEEEEC---------CCTT-CHHHHHHHHHHHHHTSCCSEEEEESEETTEETTCGGGHHHHHHHHTTTCEEEEE
T ss_pred HhCccceeEEEe---------CCCC-CHHHHHHHHHHHHhccCCcEEEEeccCCCCCCCcHhHHHHHHHHHHcCCeEEEC
Confidence 346777777765 4322 567788899999864 2 22111 123567788999999999999999999
Q ss_pred eCCCCCCC-CcCCcChh----------------hhHHHHhhcCCCCcEEEEeCCCC--chHHHH----------HHHHHh
Q 003194 234 TGFGDKDL-DLRLSNPL----------------HLRAILEDKRFSKCRFVLLHASY--PFSKEA----------SYLAYV 284 (840)
Q Consensus 234 ~G~gd~~~-~~~~~~P~----------------~L~~l~~~~~~P~l~~VllH~g~--p~~~e~----------~~la~~ 284 (840)
++....+. ......|. .+.++++ +||+++||+.|+|. |+..+. ..+...
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~P~l~~v~~H~gg~~p~~~~~~~~~~~~~~~~~~~~~ 232 (307)
T 2f6k_A 155 PNEPAILPKNVDIDLPVPLLGFFMDTTMTFINMLKYHFFE--KYPNIKVIIPHAGAFLGIVDDRIAQYAQKVYQVDVYDV 232 (307)
T ss_dssp CCCCSCCCTTSSTTCCHHHHHHHHHHHHHHHHHHHTTHHH--HCTTCEEEESGGGTTHHHHHHHHHHHHHHHHCCCHHHH
T ss_pred CCCCccccccccccccchhccchHHHHHHHHHHHhcCccc--cCCCCeEEccCCCccchhhHHHHHhhccccCcccHHHH
Confidence 98653210 01111111 2346888 89999999999974 544321 123445
Q ss_pred CCEeEecccccCCCCcHHHHHHHHHHHHHHCCCCcEEEecCCCCCcccchhhHHHHHHHHHHHHhhhhcCCCCChhHHHH
Q 003194 285 YPQVYLDFGLAIPKLSVQGMISSIKELLELAPTKKVMFSTDAYASPETYFLGAKRAREVVFSVLRDTCIDEDLSVGEAIE 364 (840)
Q Consensus 285 ~pNVyld~s~~~~~~~~~g~~~~l~~~le~~~~~kilfgSD~~~~Pe~~~~~~~~~R~~l~~~l~~~v~~g~l~~~ea~~ 364 (840)
++|||+|+|++.. ...++.+++..|.+||||||| ||... ....++.+. .+.+ -..++. +
T Consensus 233 ~~n~y~~~s~~~~-------~~~l~~~~~~~g~drll~gSD---~P~~~---~~~~~~~~~-~l~~---~~~l~~----~ 291 (307)
T 2f6k_A 233 MHHVYFDVAGAVL-------PRQLPTLMSLAQPEHLLYGSD---IPYTP---LDGSRQLGH-ALAT---TDLLTN----E 291 (307)
T ss_dssp HHHSEEECCSSCT-------TTHHHHHTTTSCGGGEECCCC---TTTSC---HHHHHHHHH-HHHH---CTTSCH----H
T ss_pred HhheEEeccCCCC-------HHHHHHHHHhcCcccEEEecC---CCCCC---chhHHHHHH-HHhh---ccCCCH----H
Confidence 5799999998753 136778888999999999999 66321 111222221 1111 124564 6
Q ss_pred HHHHHHHHhHHHHhcC
Q 003194 365 VAKDIFALNAAQFYKI 380 (840)
Q Consensus 365 ~~~~Il~~NA~rly~l 380 (840)
.+++|+++||+|||++
T Consensus 292 ~~~~i~~~Na~rl~~~ 307 (307)
T 2f6k_A 292 QKQAIFYDNAHRLLTE 307 (307)
T ss_dssp HHHHHHTHHHHHHHHC
T ss_pred HHHHHHHHHHHHHhCc
Confidence 8999999999999975
No 24
>2wm1_A 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase; neurological disorders, metal-dependent amidohydrolase, kynurenine pathway; HET: 13P; 2.01A {Homo sapiens}
Probab=99.56 E-value=8e-15 Score=161.09 Aligned_cols=187 Identities=20% Similarity=0.256 Sum_probs=123.4
Q ss_pred HhhccccccceeeecccCCCCCCCCCCHHHHHHHHHHHHhC-C-CCC----cCCchhhhhHHHHHHHHHHhhCCCcEEEe
Q 003194 160 RSAANKIVGLKSIAAYRSGLEINPHVTKKDAEEGLAEDLRS-G-KPV----RITNKSLIDYIFISSLEVAQFLDLPLQIH 233 (840)
Q Consensus 160 ~~~~~~~vgfks~~~y~~Gl~~~p~~~~~ea~~~~~r~l~~-~-~~~----~~~~~~l~d~~l~~l~e~~~e~glPvq~H 233 (840)
+.++++++||.+ +++. +++++.++++++++. + ++. ...+..+.|..+.++|+.|+++|+||.+|
T Consensus 105 ~~~p~r~~~~~~---------l~~~-~~~~a~~el~~~~~~~g~~Gv~l~~~~~~~~l~d~~~~~~~~~~~e~~lpv~iH 174 (336)
T 2wm1_A 105 VSYPRRFVGLGT---------LPMQ-APELAVKEMERCVKELGFPGVQIGTHVNEWDLNAQELFPVYAAAERLKCSLFVH 174 (336)
T ss_dssp HHSTTTEEEEEC---------CCTT-SHHHHHHHHHHHHHTSCCSEEEEESEETTEETTCGGGHHHHHHHHHHTCEEEEE
T ss_pred HhccCceeEEEe---------CCCc-CHHHHHHHHHHHHHccCCeEEEECCcCCCCCCCCccHHHHHHHHHHcCCEEEEC
Confidence 346778888876 5554 567788999999964 2 222 12345678889999999999999999999
Q ss_pred eCCCCCCCCcC-CcCh---------------hhhHHHHhhcCCCCcEEEEeCCC--CchHHHHH--------HH------
Q 003194 234 TGFGDKDLDLR-LSNP---------------LHLRAILEDKRFSKCRFVLLHAS--YPFSKEAS--------YL------ 281 (840)
Q Consensus 234 ~G~gd~~~~~~-~~~P---------------~~L~~l~~~~~~P~l~~VllH~g--~p~~~e~~--------~l------ 281 (840)
++....+..+. +..| +.+.++++ +||+++||+.|+| .|+..+.. .+
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~--~~P~l~~v~~H~Gg~~p~~~~r~~~~~~~~~~~~~~~l~ 252 (336)
T 2wm1_A 175 PWDMQMDGRMAKYWLPWLVGMPAETTIAICSMIMGGVFE--KFPKLKVCFAHGGGAFPFTVGRISHGFSMRPDLCAQDNP 252 (336)
T ss_dssp CCSCCCSGGGSSTTHHHHTHHHHHHHHHHHHHHHTTHHH--HCTTCCEEESGGGTTHHHHHHHHHHHHHHCHHHHSSSCC
T ss_pred CCCCCccccccccchHHHhccHHHHHHHHHHHHHcCchh--hCCCCeEehhcccchHHHHHHHHHhhhhhChhhhhccCC
Confidence 98642211111 1111 23667888 8999999999997 55543221 22
Q ss_pred ---HHhCCEeEecccccCCCCcHHHHHHHHHHHHHHCCCCcEEEecCCCCCcccchhhHHHHHHHHHHHHhhhhcCCCCC
Q 003194 282 ---AYVYPQVYLDFGLAIPKLSVQGMISSIKELLELAPTKKVMFSTDAYASPETYFLGAKRAREVVFSVLRDTCIDEDLS 358 (840)
Q Consensus 282 ---a~~~pNVyld~s~~~~~~~~~g~~~~l~~~le~~~~~kilfgSD~~~~Pe~~~~~~~~~R~~l~~~l~~~v~~g~l~ 358 (840)
...+.|+|+|++ .+ . ...++.+++..|.+||||||| ||... ......+.+ .+. ..++
T Consensus 253 ~~p~~~~~~~~~ds~-~~---~----~~~l~~~i~~~g~drilfGSD---~P~~~--~~~~~~~~l----~~~---~~l~ 312 (336)
T 2wm1_A 253 MNPKKYLGSFYTDAL-VH---D----PLSLKLLTDVIGKDKVILGTD---YPFPL--GELEPGKLI----ESM---EEFD 312 (336)
T ss_dssp SCGGGGTTSSEEECC-CC---S----HHHHHHHHHHHCTTSEECCCC---BTSTT--SCSSTTHHH----HTC---TTSC
T ss_pred CCHHHHHHhhEEEec-cc---C----HHHHHHHHHHhCCccEEEeCC---CCCCc--CCcCHHHHH----Hhc---cCCC
Confidence 223359999954 32 1 246788888899999999999 56311 110011122 110 2455
Q ss_pred hhHHHHHHHHHHHHhHHHHhcCCC
Q 003194 359 VGEAIEVAKDIFALNAAQFYKINL 382 (840)
Q Consensus 359 ~~ea~~~~~~Il~~NA~rly~l~~ 382 (840)
. +.+++|+++||+|||+++.
T Consensus 313 ~----~~~~~i~~~NA~rl~~l~~ 332 (336)
T 2wm1_A 313 E----ETKNKLKAGNALAFLGLER 332 (336)
T ss_dssp H----HHHHHHHTHHHHHHHTCCC
T ss_pred H----HHHHHHHHHHHHHHhCcCc
Confidence 3 6899999999999999864
No 25
>4i6k_A Amidohydrolase family protein; enzyme function initiative, isomerase, structural; HET: CIT; 2.28A {Acinetobacter baumannii}
Probab=99.56 E-value=8.5e-15 Score=158.11 Aligned_cols=184 Identities=13% Similarity=0.093 Sum_probs=121.0
Q ss_pred hhccccccceeeecccCCCCCCCCCCHHHHHHHHHHHHhCC-CCCcC-----CchhhhhHHHHHHHHHHhhCCCcEEEee
Q 003194 161 SAANKIVGLKSIAAYRSGLEINPHVTKKDAEEGLAEDLRSG-KPVRI-----TNKSLIDYIFISSLEVAQFLDLPLQIHT 234 (840)
Q Consensus 161 ~~~~~~vgfks~~~y~~Gl~~~p~~~~~ea~~~~~r~l~~~-~~~~~-----~~~~l~d~~l~~l~e~~~e~glPvq~H~ 234 (840)
.++++++||.. +.|..+. ++++++.+.+ ++.++ ..+.+.+..+.++++.|+++|+||++|+
T Consensus 91 ~~p~r~~g~~~---------v~P~~~~----~eL~~l~~~gv~Gi~l~~~~~~~~~~~~~~~~~~~~~a~~~glpv~iH~ 157 (294)
T 4i6k_A 91 QYPDRLKGIAV---------VQHTTTF----NELVNLKAQGIVGVRLNLFGLNLPALNTPDWQKFLRNVESLNWQVELHA 157 (294)
T ss_dssp HSTTTEEEEEC---------CCTTCCH----HHHHHHHTTTEEEEEEECTTSCCCCSSSHHHHHHHHHHHHTTCEEEEEC
T ss_pred HCCCeEEEEEE---------eCCcccH----HHHHHHHHCCCcEEEeccCCCCCCCcccHHHHHHHHHHHHcCCEEEEee
Confidence 45667777765 4454333 3455554432 11111 1234677889999999999999999999
Q ss_pred CCCCCCCCcCCcChhhhHHHHhhcCCCCcEEEEeCCCCc---------hHHHHHHHHHhCCEeEecccccCCCCcH----
Q 003194 235 GFGDKDLDLRLSNPLHLRAILEDKRFSKCRFVLLHASYP---------FSKEASYLAYVYPQVYLDFGLAIPKLSV---- 301 (840)
Q Consensus 235 G~gd~~~~~~~~~P~~L~~l~~~~~~P~l~~VllH~g~p---------~~~e~~~la~~~pNVyld~s~~~~~~~~---- 301 (840)
+.. .+..+.++++ +|| ++||+.|+|.| |.+++..++ .+||||+++|+.+.....
T Consensus 158 ~~~---------~l~~~~~~l~--~~p-~~~Vi~H~g~p~~~~g~~~~~~~~~~~l~-~~~nv~~k~Sg~~~~~~~~~~~ 224 (294)
T 4i6k_A 158 PPK---------YLVQLLPQLN--EYS-FDVVIDHFGRVDPVKGIEDPDYQKFLSLL-NVKQHWIKVSGFYRLGATPSNI 224 (294)
T ss_dssp CHH---------HHHHHHHHHT--TSS-SCEEESGGGCCCTTTCTTCHHHHHHHHHC-CTTTEEEECCCGGGSSSTTHHH
T ss_pred Ccc---------hHHHHHHHHH--HCC-CCEEEECCCCCCCCCCCCCHHHHHHHHHH-hCCCEEEEecccccccccCCCc
Confidence 731 2335677888 899 99999999876 455666666 579999999997643210
Q ss_pred HHHHHHHHHHHHHCCCCcEEEecCCCCCcccchhhHHHHHHHHHHHHhhhhcCCCCChhHHHHHHHHHHHHhHHHHhcCC
Q 003194 302 QGMISSIKELLELAPTKKVMFSTDAYASPETYFLGAKRAREVVFSVLRDTCIDEDLSVGEAIEVAKDIFALNAAQFYKIN 381 (840)
Q Consensus 302 ~g~~~~l~~~le~~~~~kilfgSD~~~~Pe~~~~~~~~~R~~l~~~l~~~v~~g~l~~~ea~~~~~~Il~~NA~rly~l~ 381 (840)
......++++++..|.+|+||||| ||.........+.+.+ +.+.++ .++. +.+++|+++||+|||+++
T Consensus 225 ~~~~~~l~~~~~~~g~dRll~gSD---~P~~~~~~~~~y~~~~-~~l~~~----~~~~----~~~~~i~~~NA~rl~~l~ 292 (294)
T 4i6k_A 225 NIAQQAYNIFKEKGFLHKLIWGSD---WPHTQHESLITYEDAI-KAFKQI----VFDK----HEQCLILNQNPTELFGFS 292 (294)
T ss_dssp HHHHHHHHHHHHHTCGGGEECCCC---BTCTTCTTTCCHHHHH-HHHHHH----CCCH----HHHHHHHTHHHHHHHTC-
T ss_pred hhhHHHHHHHHHHhCcccEEEeCC---CCCCCCcCCCCHHHHH-HHHHHH----CCCH----HHHHHHHHHCHHHHhCCC
Confidence 122457889999999999999999 6643211100111222 233333 2443 689999999999999985
Q ss_pred C
Q 003194 382 L 382 (840)
Q Consensus 382 ~ 382 (840)
.
T Consensus 293 ~ 293 (294)
T 4i6k_A 293 R 293 (294)
T ss_dssp -
T ss_pred C
Confidence 3
No 26
>4do7_A Amidohydrolase 2; enzyme function initiative, EFI, structural TIM-barrel fold, putative lactonase; 1.70A {Burkholderia multivorans} PDB: 4dlm_A 4dnm_A* 4dlf_A
Probab=99.55 E-value=2e-14 Score=155.94 Aligned_cols=151 Identities=17% Similarity=0.158 Sum_probs=107.7
Q ss_pred hhhhHHHHHHHHHHhhCCCcEEEeeCCCCCCCCcCCcChhhhHHHHhhcCCCCcEEEEeCCCCchH--------------
Q 003194 210 SLIDYIFISSLEVAQFLDLPLQIHTGFGDKDLDLRLSNPLHLRAILEDKRFSKCRFVLLHASYPFS-------------- 275 (840)
Q Consensus 210 ~l~d~~l~~l~e~~~e~glPvq~H~G~gd~~~~~~~~~P~~L~~l~~~~~~P~l~~VllH~g~p~~-------------- 275 (840)
.+.+..+.++++.|+++|+||++|++. ..+..+..+++ +||+++||+.|+|.|+.
T Consensus 118 ~~~~~~~~~~~~~~~~~glpv~ih~~~---------~~l~~l~~ll~--~~P~l~iVi~H~G~p~~~~~~~~~~~~~~w~ 186 (303)
T 4do7_A 118 FVDDADFARGVAWLQANDYVYDVLVFE---------RQLPDVQAFCA--RHDAHWLVLDHAGKPALAEFDRDDTALARWR 186 (303)
T ss_dssp HHHCHHHHHHHHHHHHTTCEEEECCCG---------GGHHHHHHHHH--HCCSSCEEEGGGGCCCGGGCC---CHHHHHH
T ss_pred cccCHHHHHHHHHHHHCCCeEEEecCH---------HHHHHHHHHHH--HCCCCCEEEeCCCCCCccccccccchHHHHH
Confidence 477888999999999999999999873 23456788888 89999999999998742
Q ss_pred HHHHHHHHhCCEeEecccccCCCCc---------HHHHHHHHHHHHHHCCCCcEEEecCCCCCcccchhh-HHHHHHHHH
Q 003194 276 KEASYLAYVYPQVYLDFGLAIPKLS---------VQGMISSIKELLELAPTKKVMFSTDAYASPETYFLG-AKRAREVVF 345 (840)
Q Consensus 276 ~e~~~la~~~pNVyld~s~~~~~~~---------~~g~~~~l~~~le~~~~~kilfgSD~~~~Pe~~~~~-~~~~R~~l~ 345 (840)
..+..|+ .+||||+++|+++.... .......++.+++..|.+||||||| ||...... .....+.+
T Consensus 187 ~~l~~la-~~~nv~~klSg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~dri~fgSD---~P~~~~~~~~~~~~~~~- 261 (303)
T 4do7_A 187 AALRELA-ALPHVVCKLSGLVTEADWRRGLRASDLRHIEQCLDAALDAFGPQRLMFGSD---WPVCLLAASYDEVASLV- 261 (303)
T ss_dssp HHHHHHH-TSTTEEEEECSCGGGSCTTTCCCHHHHHHHHHHHHHHHHHHCGGGEEECCC---BTGGGGTCCHHHHHHHH-
T ss_pred HHHHHHH-hCCCEEEEeCCccccccccccccCCCHHHHHHHHHHHHHHhCcccEEEeCC---CCCCcCcCCHHHHHHHH-
Confidence 2345555 79999999998764321 1223457889999999999999999 77432111 11122222
Q ss_pred HHHhhhhcCCCCChhHHHHHHHHHHHHhHHHHhcCCCCc
Q 003194 346 SVLRDTCIDEDLSVGEAIEVAKDIFALNAAQFYKINLGV 384 (840)
Q Consensus 346 ~~l~~~v~~g~l~~~ea~~~~~~Il~~NA~rly~l~~~~ 384 (840)
.+|+. ..++. +.+++|+++||+|+|+++.+.
T Consensus 262 ---~~~~~-~~l~~----~~~~~i~~~Na~rl~~l~~~~ 292 (303)
T 4do7_A 262 ---ERWAE-SRLSA----AERSALWGGTAARCYALPEPA 292 (303)
T ss_dssp ---HHHHH-HHCCH----HHHHHHTTHHHHHHTTCC---
T ss_pred ---HHHHh-cCCCH----HHHHHHHHHHHHHHhCCCCcc
Confidence 22111 12553 689999999999999997543
No 27
>4d9a_A 2-pyrone-4,6-dicarbaxylate hydrolase; structural genomics, protein structure initiative; HET: 0GY; 1.35A {Sphingomonas paucimobilis} PDB: 4d95_A* 4di8_A* 4di9_A* 4d9d_A 4dia_A 2qah_A 4d8l_A
Probab=99.55 E-value=5.3e-15 Score=160.44 Aligned_cols=186 Identities=15% Similarity=0.140 Sum_probs=125.6
Q ss_pred HHhhccccccceeeecccCCCCCCCCCCHHHHHHHHHHHHhCC-CCCcCC-----chhhhhHHHHHHHHHHhhCCCcEEE
Q 003194 159 LRSAANKIVGLKSIAAYRSGLEINPHVTKKDAEEGLAEDLRSG-KPVRIT-----NKSLIDYIFISSLEVAQFLDLPLQI 232 (840)
Q Consensus 159 l~~~~~~~vgfks~~~y~~Gl~~~p~~~~~ea~~~~~r~l~~~-~~~~~~-----~~~l~d~~l~~l~e~~~e~glPvq~ 232 (840)
++.++++++||.. ++|..+. ++++++.+.+ ++.++. ...+.+..+.++++.|++ ||++++
T Consensus 90 l~~~~~r~~Gva~---------vdp~~~~----~eL~~l~~~G~rGvR~~~~~~~~~~~~~~~~~~~~~~l~~-gl~v~l 155 (303)
T 4d9a_A 90 IARAQGKARGIAV---------VDPAIDE----AELAALHEGGMRGIRFNFLKRLVDDAPKDKFLEVAGRLPA-GWHVVI 155 (303)
T ss_dssp HHHTTTSEEEEEC---------CCTTCCH----HHHHHHHHTTEEEEEEECCTTTCSCCCHHHHHHHHTSCCT-TCEEEE
T ss_pred HHhCCCcEEEEEE---------eCCCCCH----HHHHHHHHCCCCEEEeecccCCccccCHHHHHHHHHHHhc-CCEEEE
Confidence 3456678888875 4444333 3445554433 222211 245788899999999999 999999
Q ss_pred eeCCCCCCCCcCCcChhhhHHHHhhcCCCCcEEEEeCCCCc---------hHHHHHHHHHhCCEeEecccccCCCC----
Q 003194 233 HTGFGDKDLDLRLSNPLHLRAILEDKRFSKCRFVLLHASYP---------FSKEASYLAYVYPQVYLDFGLAIPKL---- 299 (840)
Q Consensus 233 H~G~gd~~~~~~~~~P~~L~~l~~~~~~P~l~~VllH~g~p---------~~~e~~~la~~~pNVyld~s~~~~~~---- 299 (840)
|++.. .+..+..+++ +| +++||+.|+|.| +++++..++..+||||+++|+++...
T Consensus 156 ~~~~~---------~l~~l~~~~~--~~-~~~iVidH~G~p~~~~g~~~~~~~~~~~l~~~~~NV~vKlSg~~~~~~~~~ 223 (303)
T 4d9a_A 156 YFEAD---------ILEELRPFMD--AI-PVPIVIDHMGRPDVRQGPDGADMKAFRRLLDSREDIWFKATCPDRLDPAGP 223 (303)
T ss_dssp ECCGG---------GHHHHHHHHH--HC-SSCEEEGGGGCCCGGGCTTSHHHHHHHHHHHHCTTEEEECCCHHHHCTTCT
T ss_pred ecccc---------cHHHHHHHHH--HC-CCcEEEeCCCCCCcccCCCCHHHHHHHHHHhhCCCEEEEeeCceecCCCCC
Confidence 99732 3446778888 79 899999999864 56778888999999999999865211
Q ss_pred cHHHHHHHHHHHHHHCCCCcEEEecCCCCCcccchhhH-HHHHHHHHHHHhhhhcCCCCChhHHHHHHHHHHHHhHHHHh
Q 003194 300 SVQGMISSIKELLELAPTKKVMFSTDAYASPETYFLGA-KRAREVVFSVLRDTCIDEDLSVGEAIEVAKDIFALNAAQFY 378 (840)
Q Consensus 300 ~~~g~~~~l~~~le~~~~~kilfgSD~~~~Pe~~~~~~-~~~R~~l~~~l~~~v~~g~l~~~ea~~~~~~Il~~NA~rly 378 (840)
........++.+++.+ .+|+||||| ||....... ..+.+.+. .+.++ ++ ++ +.+++|+++||+|+|
T Consensus 224 ~~~~~~~~~~~~~~~~-~dRlmfGSD---wP~~~~~~~~~~~~~~~~-~~~~~-----~~-~~--~~~~~il~~NA~rly 290 (303)
T 4d9a_A 224 PWDDFARSVAPLVADY-ADRVIWGTA---WPHPNMQDAIPDDGLVVD-MIPRI-----AP-TP--ELQHKMLVTNPMRLY 290 (303)
T ss_dssp TCHHHHHHHHHHHHHT-TTSEECCCC---TTCTTCTTSCCCHHHHHH-THHHH-----SC-SH--HHHHHHHTHHHHHHH
T ss_pred CHHHHHHHHHHHHHhC-cccEEEecC---CCCcccccCCCCHHHHHH-HHHHH-----CC-CH--HHHHHHHHHHHHHHh
Confidence 1223556888899998 799999999 775432110 01111221 12222 32 22 689999999999999
Q ss_pred cCCCC
Q 003194 379 KINLG 383 (840)
Q Consensus 379 ~l~~~ 383 (840)
+++..
T Consensus 291 ~~~~~ 295 (303)
T 4d9a_A 291 WSEEM 295 (303)
T ss_dssp CGGGC
T ss_pred CCCcc
Confidence 98643
No 28
>2hbv_A 2-amino-3-carboxymuconate 6-semialdehyde decarbox; ACMSD, TIM-barrel, decarboxylase, metaloenzyme, lyase; 1.65A {Pseudomonas fluorescens} SCOP: c.1.9.15 PDB: 2hbx_A
Probab=99.53 E-value=2e-14 Score=157.94 Aligned_cols=185 Identities=18% Similarity=0.273 Sum_probs=122.0
Q ss_pred HhhccccccceeeecccCCCCCCCCCCHHHHHHHHHHHHhCC-CCC----cCCchhhhhHHHHHHHHHHhhCCCcEEEee
Q 003194 160 RSAANKIVGLKSIAAYRSGLEINPHVTKKDAEEGLAEDLRSG-KPV----RITNKSLIDYIFISSLEVAQFLDLPLQIHT 234 (840)
Q Consensus 160 ~~~~~~~vgfks~~~y~~Gl~~~p~~~~~ea~~~~~r~l~~~-~~~----~~~~~~l~d~~l~~l~e~~~e~glPvq~H~ 234 (840)
+.++++++||.+ +++. +++++.+++++++..+ ++. ...+..++|..+.++|+.|+++|+||.+|+
T Consensus 109 ~~~p~r~~~~~~---------l~~~-~~~~a~~el~~~~~~g~~Gv~l~~~~~~~~l~d~~~~p~~~~~~e~~lpv~iH~ 178 (334)
T 2hbv_A 109 AHNPQRIKVLAQ---------VPLQ-DLDLACKEASRAVAAGHLGIQIGNHLGDKDLDDATLEAFLTHCANEDIPILVHP 178 (334)
T ss_dssp TTCTTTEEECBC---------CCTT-SHHHHHHHHHHHHHHTCCCEEEESCBTTBCTTSHHHHHHHHHHHHTTCCEEEEC
T ss_pred hhCCCeEEEEEe---------cCcc-CHHHHHHHHHHHHHcCCeEEEECCCCCCCCCCcHHHHHHHHHHHHCCCEEEECC
Confidence 346778888876 5554 5677888899988533 221 223456788999999999999999999999
Q ss_pred CCCCCCCCcC-Cc------Ch---------hhhHHHHhhcCCCC-cEEEEeCCC--CchHHHHHH-------H-------
Q 003194 235 GFGDKDLDLR-LS------NP---------LHLRAILEDKRFSK-CRFVLLHAS--YPFSKEASY-------L------- 281 (840)
Q Consensus 235 G~gd~~~~~~-~~------~P---------~~L~~l~~~~~~P~-l~~VllH~g--~p~~~e~~~-------l------- 281 (840)
+....+..+. +. .| +.+.++++ +||+ ++||+.|+| .|+..+... +
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~v~~--~~P~~l~~v~~H~Gg~~p~~~~r~~~~~~~~~~~~~~~~~ 256 (334)
T 2hbv_A 179 WDMMGGQRMKKWMLPWLVAMPAETQLAILSLILSGAFE--RIPKSLKICFGHGGGSFAFLLGRVDNAWRHRDIVREDCPR 256 (334)
T ss_dssp CSCSCTTTTCSTTHHHHTHHHHHHHHHHHHHHHTTGGG--TSCTTCCEEESGGGTTHHHHHHHHHHHHHHCHHHHTTCCS
T ss_pred CCCCCCcchhhhhhhhhhhcHHHHHHHHHHHHHcCchh--hCCCcceEEeecccchHHHHHHHHHhhhhcccccccccCC
Confidence 8642211111 11 11 23566777 9999 999999997 354432211 1
Q ss_pred --HHhCCEeEecccccCCCCcHHHHHHHHHHHHHHCCCCcEEEecCCCCCcccchhhHHHHHHHHHHHHhhhhcCCCCCh
Q 003194 282 --AYVYPQVYLDFGLAIPKLSVQGMISSIKELLELAPTKKVMFSTDAYASPETYFLGAKRAREVVFSVLRDTCIDEDLSV 359 (840)
Q Consensus 282 --a~~~pNVyld~s~~~~~~~~~g~~~~l~~~le~~~~~kilfgSD~~~~Pe~~~~~~~~~R~~l~~~l~~~v~~g~l~~ 359 (840)
...++|+|+|++ .+ . ...++.+++..|.+||||||| ||... ...... +.+ +...++.
T Consensus 257 ~~~~~~~~~y~ds~-~~---~----~~~l~~~~~~~g~drilfGSD---~P~~~--~~~~~~----~~l----~~~~l~~ 315 (334)
T 2hbv_A 257 PPSEYVDRFFVDSA-VF---N----PGALELLVSVMGEDRVMLGSD---YPFPL--GEQKIG----GLV----LSSNLGE 315 (334)
T ss_dssp CGGGGGGGCEEECC-CS---S----HHHHHHHHHHHCGGGEECCCC---BTSTT--SCSSTT----HHH----HTSSCCH
T ss_pred CHHHHHhhhEEEec-cC---C----HHHHHHHHHHhCcccEEEeCC---CCCCC--CCcCHh----hHh----hhcCCCH
Confidence 112359999954 33 1 246788888889999999999 66321 110001 111 1234664
Q ss_pred hHHHHHHHHHHHHhHHHHhcCC
Q 003194 360 GEAIEVAKDIFALNAAQFYKIN 381 (840)
Q Consensus 360 ~ea~~~~~~Il~~NA~rly~l~ 381 (840)
+.+++|+++||+|||+++
T Consensus 316 ----~~~~~i~~~NA~rl~~l~ 333 (334)
T 2hbv_A 316 ----SAKDKIISGNASKFFNIN 333 (334)
T ss_dssp ----HHHHHHHTHHHHHHHTCC
T ss_pred ----HHHHHHHhHHHHHHhCCC
Confidence 689999999999999985
No 29
>2gwg_A 4-oxalomesaconate hydratase; TIM-barrel like protein, structural genomics, PSI, protein S initiative; 1.80A {Rhodopseudomonas palustris} SCOP: c.1.9.15
Probab=99.50 E-value=3.5e-14 Score=157.02 Aligned_cols=186 Identities=18% Similarity=0.294 Sum_probs=120.8
Q ss_pred HHhhccccccceeeecccCCCCCCCC--CCHHHHHHHHHHHHhC-C-CCCcC---------CchhhhhHHHHHHHHHHhh
Q 003194 159 LRSAANKIVGLKSIAAYRSGLEINPH--VTKKDAEEGLAEDLRS-G-KPVRI---------TNKSLIDYIFISSLEVAQF 225 (840)
Q Consensus 159 l~~~~~~~vgfks~~~y~~Gl~~~p~--~~~~ea~~~~~r~l~~-~-~~~~~---------~~~~l~d~~l~~l~e~~~e 225 (840)
.+.++++++||.+ +++. .+++++.++++++++. + .+..+ ....+.|..+.++|+.|++
T Consensus 100 ~~~~p~rf~~~~~---------~p~~~~~~~~~a~~eL~r~~~~~g~~Gv~l~~~~~~~~~~~~~l~d~~~~p~~~~a~e 170 (350)
T 2gwg_A 100 SQLFPDNFIGAAM---------LPQSPGVDPKTCIPELEKCVKEYGFVAINLNPDPSGGHWTSPPLTDRIWYPIYEKMVE 170 (350)
T ss_dssp HHHSTTTEEEEEE---------CCCCTTSCGGGGHHHHHHHHHTSCCCEEEECSCTTSSCCCSCCTTSGGGHHHHHHHHH
T ss_pred HHhCCCcEEEEEe---------CCCCCCCCHHHHHHHHHHHHhccCCeEEEECCCCCCccCCCCCCCCHHHHHHHHHHHH
Confidence 3456788888877 4322 1346678889999853 2 11111 1245788899999999999
Q ss_pred CCCcEEEeeCCCCC-C---CCcCCcCh-------hhhHHHHhhcCCCCcEEEEeCCC--CchHHHH----HH-H------
Q 003194 226 LDLPLQIHTGFGDK-D---LDLRLSNP-------LHLRAILEDKRFSKCRFVLLHAS--YPFSKEA----SY-L------ 281 (840)
Q Consensus 226 ~glPvq~H~G~gd~-~---~~~~~~~P-------~~L~~l~~~~~~P~l~~VllH~g--~p~~~e~----~~-l------ 281 (840)
+|+||++|++.... . ....+..+ +.+.++++ +||+++||+.|+| .|+.... .. +
T Consensus 171 ~~lpv~iH~~~~~~~~~~~~~~~~~~~~~~a~~~li~~~v~~--~~P~l~~vi~H~Gg~~p~~~~r~~~~~~~~~~~~l~ 248 (350)
T 2gwg_A 171 LEIPAMIHVSTSCNTCFHTTGAHYLNADTTAFMQCVAGDLFK--DFPELKFVIPHGGGAVPYHWGRFRGLAQEMKKPLLE 248 (350)
T ss_dssp HTCCEEECCCC---------TTHHHHHHHHHHHHHHHSCHHH--HCTTCCEEESGGGTTTGGGHHHHHHHHHHTTCCCHH
T ss_pred cCCeEEECCCCCCcccccccccccchHHHHHHHHHHhcCccc--cCCCCcEEeccCCCcchhhHHHHHHHHHhccCCCcH
Confidence 99999999986421 0 00111112 12346788 8999999999996 5665321 11 2
Q ss_pred HHhCCEeEecccccCCCCcHHHHHHHHHHHHHHCCCCcEEEecCCCCCccc----------chhhHHHHHHHHHHHHhhh
Q 003194 282 AYVYPQVYLDFGLAIPKLSVQGMISSIKELLELAPTKKVMFSTDAYASPET----------YFLGAKRAREVVFSVLRDT 351 (840)
Q Consensus 282 a~~~pNVyld~s~~~~~~~~~g~~~~l~~~le~~~~~kilfgSD~~~~Pe~----------~~~~~~~~R~~l~~~l~~~ 351 (840)
...++|||+|+|++. . ..++.+++..|.+||||||| ||.. ++.. ..+.+ .+
T Consensus 249 ~~~~~n~y~d~s~~~----~----~~l~~l~~~~g~dril~gSD---~P~~~~~~~p~~~~~~~~---~~~~l----~~- 309 (350)
T 2gwg_A 249 DHVLNNIFFDTCVYH----Q----PGIDLLNTVIPVDNVLFASE---MIGAVRGIDPRTGFYYDD---TKRYI----EA- 309 (350)
T ss_dssp HHTTTTEEEECCCCS----H----HHHHHHHHHSCGGGEECCCC---CSSSCCCEETTTTEETTC---THHHH----HH-
T ss_pred HHHhhcEEEEecccC----c----HHHHHHHHHhCcccEEEecC---CCCCcccCCcccccchhh---HHHHH----Hh-
Confidence 346699999999732 1 35788899999999999999 5521 1111 11222 11
Q ss_pred hcCCCCChhHHHHHHHHHHHHhHHHHhcC
Q 003194 352 CIDEDLSVGEAIEVAKDIFALNAAQFYKI 380 (840)
Q Consensus 352 v~~g~l~~~ea~~~~~~Il~~NA~rly~l 380 (840)
+ ..++. +.+++|+++||+|||++
T Consensus 310 ~--~~l~~----~~~~~i~~~NA~rl~~~ 332 (350)
T 2gwg_A 310 S--TILTP----EEKQQIYEGNARRVYPR 332 (350)
T ss_dssp C--SSSCH----HHHHHHHTHHHHHHCHH
T ss_pred c--cCCCH----HHHHHHHHHHHHHHHHh
Confidence 1 24554 68999999999999986
No 30
>4dzi_A Putative TIM-barrel metal-dependent hydrolase; amidohydrolase, bimetal binding site, enzyme FUNC initiative, EFI; HET: SO4; 1.60A {Mycobacterium avium subsp}
Probab=99.48 E-value=2.6e-14 Score=161.53 Aligned_cols=191 Identities=16% Similarity=0.162 Sum_probs=120.8
Q ss_pred HHHHHH-hhc-cccccceeeecccCCCCCCCCCCHHHHHHHHHHHHhCC-CCCcC---------CchhhhhHHHHHHHHH
Q 003194 155 FLKQLR-SAA-NKIVGLKSIAAYRSGLEINPHVTKKDAEEGLAEDLRSG-KPVRI---------TNKSLIDYIFISSLEV 222 (840)
Q Consensus 155 l~~~l~-~~~-~~~vgfks~~~y~~Gl~~~p~~~~~ea~~~~~r~l~~~-~~~~~---------~~~~l~d~~l~~l~e~ 222 (840)
+.+.++ .++ +++.||.. +++. +++.+.++++|+++.| ++..+ ....++|..+.|+|+.
T Consensus 150 lae~~~~~~P~~Rf~g~a~---------v~~~-d~~~a~~EL~r~~~~G~~Gv~l~p~~~~~~~g~~~l~d~~~~pl~~~ 219 (423)
T 4dzi_A 150 LDEDWGFDRPDHRIIAAPI---------VSLA-DPTRAVEEVDFVLARGAKLVLVRPAPVPGLVKPRSLGDRSHDPVWAR 219 (423)
T ss_dssp HHHHTCSSCTTCCEEECCB---------CCCS-SHHHHHHHHHHHHHTTCSCEECCSSCBCCSSSCBCTTCGGGHHHHHH
T ss_pred HHHHHHhhCCCCcEEEEEe---------CCcc-CHHHHHHHHHHHHHcCCeEEEEecCCCCCCCCCCCCCCccHHHHHHH
Confidence 334444 467 89999987 5443 6888999999999754 22222 2467889999999999
Q ss_pred HhhCCCcEEEeeCCCCCC----------CCcCCc--Ch-----------------hhhHHHHhhcCCCCcEEEEeCCCCc
Q 003194 223 AQFLDLPLQIHTGFGDKD----------LDLRLS--NP-----------------LHLRAILEDKRFSKCRFVLLHASYP 273 (840)
Q Consensus 223 ~~e~glPvq~H~G~gd~~----------~~~~~~--~P-----------------~~L~~l~~~~~~P~l~~VllH~g~p 273 (840)
|+++|+||++|+|.+... ....+. .| +.+.++++ +||++|||+.|+|..
T Consensus 220 ~~elg~pV~iH~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~Li~sGvf~--RfP~Lkiil~h~Gg~ 297 (423)
T 4dzi_A 220 LAEAGVPVGFHLSDSGYLHIAAAWGGKSTFEGFGAKDPLDQVLLDDRAIHDTMASMIVHGVFT--RHPKLKAVSIENGSY 297 (423)
T ss_dssp HHHHTCCEEEECCCCSTHHHHHHTTCC-------CCCHHHHHHHTTHHHHHHHHHHHHTTHHH--HCTTCCEEEESSCST
T ss_pred HHhcCCeEEEeCCCCCccccccccccccccccccccchhHHHhccchHHHHHHHHHHHcCchh--hCCCCeEEEeCCCcc
Confidence 999999999999864211 001111 11 12346677 999999999999865
Q ss_pred hH---HHHHH-HHHhC-------------CEeEecccccCCCCcHHHHHHHHHHHHHHCCCCcEEEecCCCCCcccchhh
Q 003194 274 FS---KEASY-LAYVY-------------PQVYLDFGLAIPKLSVQGMISSIKELLELAPTKKVMFSTDAYASPETYFLG 336 (840)
Q Consensus 274 ~~---~e~~~-la~~~-------------pNVyld~s~~~~~~~~~g~~~~l~~~le~~~~~kilfgSD~~~~Pe~~~~~ 336 (840)
|. .+... ..... .|+|+++ +. . ..++.+++..|.+||||||| ||.. ..
T Consensus 298 wlP~~l~Rld~~~~~~~~~~~~~Pse~~r~n~y~t~---~~---~----~~l~~~~~~~G~drilfgSD---yP~~--~~ 362 (423)
T 4dzi_A 298 FVHRLIKRLKKAANTQPQYFPEDPVEQLRNNVWIAP---YY---E----DDLPELARVIGVDKILFGSD---WPHG--EG 362 (423)
T ss_dssp HHHHHHHHHHHHHHHCGGGCSSCHHHHHHHHEEECC---CT---T----SCHHHHHHHHCGGGBCCCCC---BTST--TS
T ss_pred hHHHHHHHHHHHHHhCccccCCCHHHHHhhCeEEee---cC---h----HHHHHHHHHcCcceEEEecC---CCCc--cC
Confidence 43 22111 11111 3788863 21 1 24567788889999999999 7732 11
Q ss_pred HHHHHHHHHHHHhhhhcC-CCCChhHHHHHHHHHHHHhHHHHhcCCCCc
Q 003194 337 AKRAREVVFSVLRDTCID-EDLSVGEAIEVAKDIFALNAAQFYKINLGV 384 (840)
Q Consensus 337 ~~~~R~~l~~~l~~~v~~-g~l~~~ea~~~~~~Il~~NA~rly~l~~~~ 384 (840)
.... .++++. ..++. +.+++|+++||+|||+|+...
T Consensus 363 ~~~~--------~~~~~~l~~l~~----~~~~~I~~~NA~rl~~l~~~~ 399 (423)
T 4dzi_A 363 LASP--------VSFTAELKGFSE----SDIRKIMRDNALDLLGVQVGS 399 (423)
T ss_dssp CSSG--------GGGGGGCTTSCH----HHHHHHHTHHHHHHHC-----
T ss_pred ccCH--------HHHHHHhcCCCH----HHHHHHHHHHHHHHHCCCccc
Confidence 1000 122222 24553 689999999999999997543
No 31
>2gzx_A Putative TATD related DNAse; deoxyribonuclease, NESG, ZR237, structural GENO PSI, protein structure initiative; 2.20A {Staphylococcus aureus subsp}
Probab=99.22 E-value=3e-11 Score=127.49 Aligned_cols=147 Identities=18% Similarity=0.198 Sum_probs=96.2
Q ss_pred hhhhhHHHHHHHHHHhhCCCcEEEeeCCCCCCCCcCCcChhhhHHHHhhcCCC--CcEEEEeCCCCchHHHHHHHHHhCC
Q 003194 209 KSLIDYIFISSLEVAQFLDLPLQIHTGFGDKDLDLRLSNPLHLRAILEDKRFS--KCRFVLLHASYPFSKEASYLAYVYP 286 (840)
Q Consensus 209 ~~l~d~~l~~l~e~~~e~glPvq~H~G~gd~~~~~~~~~P~~L~~l~~~~~~P--~l~~VllH~g~p~~~e~~~la~~~p 286 (840)
..+.+..+.+++++|+++|+||.+|++.. +..+..+++ ++| ++++|+ |++.....++..+. .++
T Consensus 104 ~~~~~~~~~~~~~~a~~~~~pv~iH~~~~----------~~~~~~~l~--~~p~~~~~~i~-H~~~g~~~~~~~~l-~~~ 169 (265)
T 2gzx_A 104 ADVQKEVFRKQIALAKRLKLPIIIHNREA----------TQDCIDILL--EEHAEEVGGIM-HSFSGSPEIADIVT-NKL 169 (265)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCEEEEEESC----------HHHHHHHHH--HTTGGGTCEEE-TTCCSCHHHHHHHH-HTS
T ss_pred HHHHHHHHHHHHHHHHHcCCcEEEEeccc----------HHHHHHHHH--hcCCCCCcEEE-EcCCCCHHHHHHHH-HHC
Confidence 45677789999999999999999999732 234666888 789 899985 55333444555555 368
Q ss_pred EeEecccccCCCCcHHHHHHHHHHHHHHCCCCcEEEecCCCCCcccchh----hHHHHHHHHHHHHhhhhcCCCCChhHH
Q 003194 287 QVYLDFGLAIPKLSVQGMISSIKELLELAPTKKVMFSTDAYASPETYFL----GAKRAREVVFSVLRDTCIDEDLSVGEA 362 (840)
Q Consensus 287 NVyld~s~~~~~~~~~g~~~~l~~~le~~~~~kilfgSD~~~~Pe~~~~----~~~~~R~~l~~~l~~~v~~g~l~~~ea 362 (840)
|||+++|++..... ...++++++..|.+|||||||++......+. ...+.+..+ ..+.++ ..++.
T Consensus 170 ~~y~~~sg~~~~~~----~~~~~~~i~~~~~dril~gSD~P~~~~~~~~g~~~~~~~~~~~~-~~l~~~---~~~~~--- 238 (265)
T 2gzx_A 170 NFYISLGGPVTFKN----AKQPKEVAKHVSMERLLVETDAPYLSPHPYRGKRNEPARVTLVA-EQIAEL---KGLSY--- 238 (265)
T ss_dssp CCEEEECGGGGCSS----CCHHHHHHHHSCTTTEEECCCTTSCCCTTCTTSCCCGGGHHHHH-HHHHHH---TTCCH---
T ss_pred CceEEecceeecCC----cHHHHHHHHhCChhhEEEccCCCCCCCcccCCCCCChHHHHHHH-HHHHHH---hCCCH---
Confidence 99999998754321 1257788889999999999994321100000 001122222 111111 24564
Q ss_pred HHHHHHHHHHhHHHHhcCC
Q 003194 363 IEVAKDIFALNAAQFYKIN 381 (840)
Q Consensus 363 ~~~~~~Il~~NA~rly~l~ 381 (840)
+.+++|+++||+|+|++.
T Consensus 239 -~~~~~i~~~Na~rl~~~~ 256 (265)
T 2gzx_A 239 -EEVCEQTTKNAEKLFNLN 256 (265)
T ss_dssp -HHHHHHHHHHHHHHHC--
T ss_pred -HHHHHHHHHHHHHHhCCc
Confidence 689999999999999985
No 32
>1j6o_A TATD-related deoxyribonuclease; structural genomics, TM0667, JCSG, PSI, protein structure initiative, joint center for structural genomics; 1.80A {Thermotoga maritima} SCOP: c.1.9.12
Probab=99.18 E-value=3.8e-11 Score=127.61 Aligned_cols=146 Identities=20% Similarity=0.179 Sum_probs=98.6
Q ss_pred hhhhhHHHHHHHHHHhhCCCcEEEeeCCCCCCCCcCCcChhhhHHHHhhcCCC--CcEEEEeCCCCchHHHHHHHHHhCC
Q 003194 209 KSLIDYIFISSLEVAQFLDLPLQIHTGFGDKDLDLRLSNPLHLRAILEDKRFS--KCRFVLLHASYPFSKEASYLAYVYP 286 (840)
Q Consensus 209 ~~l~d~~l~~l~e~~~e~glPvq~H~G~gd~~~~~~~~~P~~L~~l~~~~~~P--~l~~VllH~g~p~~~e~~~la~~~p 286 (840)
..+.+..|.+.+++|+++|+||.+|++.. +..+..+++ ++| ++++|+ |+...+...+..++. .
T Consensus 115 ~~~q~~~f~~~~~~a~~~~lPv~iH~~~~----------~~~~~~il~--~~p~~~~~~I~-H~~~g~~~~~~~~~~--~ 179 (268)
T 1j6o_A 115 AEVQKRVFVEQIELAGKLNLPLVVHIRDA----------YSEAYEILR--TESLPEKRGVI-HAFSSDYEWAKKFID--L 179 (268)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCEEEEEESC----------HHHHHHHHH--HSCCCSSCEEE-TTCCSCHHHHHHHHH--H
T ss_pred hHHHHHHHHHHHHHHHHhCCCEEEEeCch----------HHHHHHHHH--hcCCCCCCEEE-EcCCCCHHHHHHHHH--C
Confidence 45677789999999999999999999731 334556777 788 999999 985555555555554 3
Q ss_pred EeEecccccCCCCcHHHHHHHHHHHHHHCCCCcEEEecCCCCCcccchhh----HHHHHHHHHHHHhhhhcCCCCChhHH
Q 003194 287 QVYLDFGLAIPKLSVQGMISSIKELLELAPTKKVMFSTDAYASPETYFLG----AKRAREVVFSVLRDTCIDEDLSVGEA 362 (840)
Q Consensus 287 NVyld~s~~~~~~~~~g~~~~l~~~le~~~~~kilfgSD~~~~Pe~~~~~----~~~~R~~l~~~l~~~v~~g~l~~~ea 362 (840)
|+|+++|+++.+.. ...++++++..|.+||||+||++..+...+.+ ..++.+.+. .+.+. ..++.
T Consensus 180 g~y~~~sg~~~~~~----~~~l~~~i~~~~~driL~eTD~P~~~~~~~~g~~n~p~~~~~~~~-~la~~---~~~~~--- 248 (268)
T 1j6o_A 180 GFLLGIGGPVTYPK----NEALREVVKRVGLEYIVLETDCPFLPPQPFRGKRNEPKYLKYVVE-TISQV---LGVPE--- 248 (268)
T ss_dssp TEEEEECGGGGCTT----CHHHHHHHHHHCGGGEEECCCBTSCCCGGGTTSCCCGGGHHHHHH-HHHHH---HTSCH---
T ss_pred CCeEEecccccccc----hHHHHHHHHhCChhhEEEecCCCCCCCcccCCCCCchHHHHHHHH-HHHHH---hCcCH---
Confidence 99999998764321 13577888899999999999954321100000 011222221 11111 14564
Q ss_pred HHHHHHHHHHhHHHHhcCC
Q 003194 363 IEVAKDIFALNAAQFYKIN 381 (840)
Q Consensus 363 ~~~~~~Il~~NA~rly~l~ 381 (840)
+.+++|+++||+|+|++.
T Consensus 249 -e~~~~i~~~Na~rlf~l~ 266 (268)
T 1j6o_A 249 -AKVDEATTENARRIFLEV 266 (268)
T ss_dssp -HHHHHHHHHHHHHHHHSC
T ss_pred -HHHHHHHHHHHHHHhCcc
Confidence 678999999999999984
No 33
>1yix_A Deoxyribonuclease YCFH; TIM barrel, zinc ION, NEW YORK SGX center for structural genomics, nysgxrc; 1.90A {Escherichia coli} SCOP: c.1.9.12
Probab=99.01 E-value=5e-10 Score=118.19 Aligned_cols=147 Identities=20% Similarity=0.251 Sum_probs=97.1
Q ss_pred hhhhhHHHHHHHHHHhhCCCcEEEeeCCCCCCCCcCCcChhhhHHHHhhcCCCCcEEEEeCCCCchHHHHHHHHHhCCEe
Q 003194 209 KSLIDYIFISSLEVAQFLDLPLQIHTGFGDKDLDLRLSNPLHLRAILEDKRFSKCRFVLLHASYPFSKEASYLAYVYPQV 288 (840)
Q Consensus 209 ~~l~d~~l~~l~e~~~e~glPvq~H~G~gd~~~~~~~~~P~~L~~l~~~~~~P~l~~VllH~g~p~~~e~~~la~~~pNV 288 (840)
..+.+..+.+.+++|+++|+||.+|++.. +..+..+++...+|++++|+ |+...+..++..++. .|+
T Consensus 106 ~~~q~~~~~~~~~~a~~~~~pv~iH~~~~----------~~~~~~~l~~~~~p~~~~v~-H~~~~~~~~~~~~~~--~g~ 172 (265)
T 1yix_A 106 KVRQQESFIHHIQIGRELNKPVIVHTRDA----------RADTLAILREEKVTDCGGVL-HCFTEDRETAGKLLD--LGF 172 (265)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCEEEEEESC----------HHHHHHHHHHTTGGGTCEEE-TTCCSCHHHHHHHHT--TTC
T ss_pred hHHHHHHHHHHHHHHHHhCCCEEEEecCc----------hHHHHHHHHhcCCCCCCEEE-EcCCCCHHHHHHHHH--CCc
Confidence 45667788999999999999999999732 33455566633469999987 986555555555554 399
Q ss_pred EecccccCCCCcHHHHHHHHHHHHHHCCCCcEEEecCCCCC-ccc-----chhhHHHHHHHHHHHHhhhhcCCCCChhHH
Q 003194 289 YLDFGLAIPKLSVQGMISSIKELLELAPTKKVMFSTDAYAS-PET-----YFLGAKRAREVVFSVLRDTCIDEDLSVGEA 362 (840)
Q Consensus 289 yld~s~~~~~~~~~g~~~~l~~~le~~~~~kilfgSD~~~~-Pe~-----~~~~~~~~R~~l~~~l~~~v~~g~l~~~ea 362 (840)
|+++++++.... ...++++++..|.+|+|||||++.. |.. ..+ ..+.+.+. .+.+. ..++.
T Consensus 173 ~~~~sg~~~~~~----~~~~~~~~~~~~~drll~~TD~P~~~~~~~~g~~~~~--~~l~~~~~-~l~~~---~~~~~--- 239 (265)
T 1yix_A 173 YISFSGIVTFRN----AEQLRDAARYVPLDRLLVETDSPYLAPVPHRGKENQP--AMVRDVAE-YMAVL---KGVAV--- 239 (265)
T ss_dssp EEEECGGGGSTT----CHHHHHHHHHSCGGGEEECCCBTSCCCTTCTTSCCCG--GGHHHHHH-HHHHH---HTSCH---
T ss_pred EEEECCccccCc----hHHHHHHHHhCChHHEEEecCCCCCCCcccCCCCCch--HHHHHHHH-HHHHH---hCcCH---
Confidence 999998654321 1356788888999999999994321 100 000 01222221 11111 13554
Q ss_pred HHHHHHHHHHhHHHHhcCCC
Q 003194 363 IEVAKDIFALNAAQFYKINL 382 (840)
Q Consensus 363 ~~~~~~Il~~NA~rly~l~~ 382 (840)
+.+++|+++||+|+|+++.
T Consensus 240 -~~~~~i~~~Na~rl~~l~~ 258 (265)
T 1yix_A 240 -EELAQVTTDNFARLFHIDA 258 (265)
T ss_dssp -HHHHHHHHHHHHHHTTCCG
T ss_pred -HHHHHHHHHHHHHHhCcCh
Confidence 5788999999999999853
No 34
>1zzm_A Putative deoxyribonuclease YJJV; hydrolaze, zinc, PEG, structural genomics, PSI; HET: P33; 1.80A {Escherichia coli} SCOP: c.1.9.12
Probab=98.79 E-value=9.8e-09 Score=108.03 Aligned_cols=145 Identities=18% Similarity=0.200 Sum_probs=89.4
Q ss_pred hhhhHHHHHHHHHHhhCCCcEEEeeCCCCCCCCcCCcChhhhHHHHhhcCCC-CcEEEEeCCCCchHHHHHHHHHhCCEe
Q 003194 210 SLIDYIFISSLEVAQFLDLPLQIHTGFGDKDLDLRLSNPLHLRAILEDKRFS-KCRFVLLHASYPFSKEASYLAYVYPQV 288 (840)
Q Consensus 210 ~l~d~~l~~l~e~~~e~glPvq~H~G~gd~~~~~~~~~P~~L~~l~~~~~~P-~l~~VllH~g~p~~~e~~~la~~~pNV 288 (840)
...+..|.+.+++|.++|+||.+|++.. ...+.++++ ++| ++++|+ |+-......+..+.. .|+
T Consensus 110 ~~q~~~f~~~~~~a~~~~~Pv~iH~~~a----------~~~~~~il~--~~~~~~~~i~-H~~~g~~~~~~~~~~--~g~ 174 (259)
T 1zzm_A 110 ERQQWLLDEQLKLAKRYDLPVILHSRRT----------HDKLAMHLK--RHDLPRTGVV-HGFSGSLQQAERFVQ--LGY 174 (259)
T ss_dssp HHHHHHHHHHHHHHHHTTCCEEEEEESC----------HHHHHHHHH--HHCCTTCEEE-TTCCSCHHHHHHHHH--TTC
T ss_pred HHHHHHHHHHHHHHHHhCCcEEEEeccc----------HHHHHHHHH--hcCCCCCEEE-EcCCCCHHHHHHHHH--CCC
Confidence 3455678888999999999999999742 123445666 343 466766 972222233334443 589
Q ss_pred EecccccCCCCcHHHHHHHHHHHHHHCCCCcEEEecCCCCCcccchhh----HHHHHHHHHHHHhhhhcCCCCChhHHHH
Q 003194 289 YLDFGLAIPKLSVQGMISSIKELLELAPTKKVMFSTDAYASPETYFLG----AKRAREVVFSVLRDTCIDEDLSVGEAIE 364 (840)
Q Consensus 289 yld~s~~~~~~~~~g~~~~l~~~le~~~~~kilfgSD~~~~Pe~~~~~----~~~~R~~l~~~l~~~v~~g~l~~~ea~~ 364 (840)
|++++++..+-. ...++++++..|.+|||++||++..+...+.+ ..+....+. ...+...++. +
T Consensus 175 ~i~~~g~~~~~~----~~~~~~~~~~~~~dril~eTD~P~~~p~~~~g~~~~p~~l~~~~~----~la~~~g~~~----e 242 (259)
T 1zzm_A 175 KIGVGGTITYPR----ASKTRDVIAKLPLASLLLETDAPDMPLNGFQGQPNRPEQAARVFA----VLCELRREPA----D 242 (259)
T ss_dssp EEEECGGGGCTT----TCSHHHHHHHSCGGGEEECCCBTSSCCTTCTTSCCCGGGHHHHHH----HHHHHCSSCH----H
T ss_pred EEEECceeeccc----cHHHHHHHHhCCHHHEEEecCCCCccCCCCCCCCCcHHHHHHHHH----HHHHHHCcCH----H
Confidence 999998764211 12466778889999999999954321100000 011222221 1111124665 5
Q ss_pred HHHHHHHHhHHHHhcCC
Q 003194 365 VAKDIFALNAAQFYKIN 381 (840)
Q Consensus 365 ~~~~Il~~NA~rly~l~ 381 (840)
.+.+++++||+|+|+++
T Consensus 243 ~~~~~~~~Na~rl~~l~ 259 (259)
T 1zzm_A 243 EIAQALLNNTYTLFNVP 259 (259)
T ss_dssp HHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHHHHHHHhCcC
Confidence 78899999999999874
No 35
>1xwy_A DNAse TATD, deoxyribonuclease TATD; TIM barrael, zinc ION, structural genomics, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.1.9.12
Probab=98.75 E-value=1.2e-08 Score=107.58 Aligned_cols=145 Identities=17% Similarity=0.170 Sum_probs=91.2
Q ss_pred hhhhHHHHHHHHHHhhCCCcEEEeeCCCCCCCCcCCcChhhhHHHHhhcCCC--CcEEEEeCCCCchHHHHHHHHHhCCE
Q 003194 210 SLIDYIFISSLEVAQFLDLPLQIHTGFGDKDLDLRLSNPLHLRAILEDKRFS--KCRFVLLHASYPFSKEASYLAYVYPQ 287 (840)
Q Consensus 210 ~l~d~~l~~l~e~~~e~glPvq~H~G~gd~~~~~~~~~P~~L~~l~~~~~~P--~l~~VllH~g~p~~~e~~~la~~~pN 287 (840)
...+..|.+.+++|.++|+||.+|++.. ...+-++++ ++| ..++|+ |+.......+..++. .|
T Consensus 108 ~~q~~~f~~~l~~a~~~~lpv~iH~~~a----------~~~~~~il~--~~~~~~~~~v~-H~~~g~~~~~~~~~~--~g 172 (264)
T 1xwy_A 108 EEQERAFVAQLRIAADLNMPVFMHCRDA----------HERFMTLLE--PWLDKLPGAVL-HCFTGTREEMQACVA--HG 172 (264)
T ss_dssp HHHHHHHHHHHHHHHHHTCCEEEEEESC----------HHHHHHHHG--GGGGGSSCEEE-CSCCCCHHHHHHHHH--TT
T ss_pred HHHHHHHHHHHHHHHHhCCcEEEEcCCc----------hHHHHHHHH--hcCCCCCcEEE-EccCCCHHHHHHHHH--CC
Confidence 3445568888999999999999999621 123445677 565 788877 973223333444444 38
Q ss_pred eEecccccCC-CCcHHHHHHHHHHHHHHCCCCcEEEecCCCCC-cc---cchhh----HHHHHHHHHHHHhhhhcCCCCC
Q 003194 288 VYLDFGLAIP-KLSVQGMISSIKELLELAPTKKVMFSTDAYAS-PE---TYFLG----AKRAREVVFSVLRDTCIDEDLS 358 (840)
Q Consensus 288 Vyld~s~~~~-~~~~~g~~~~l~~~le~~~~~kilfgSD~~~~-Pe---~~~~~----~~~~R~~l~~~l~~~v~~g~l~ 358 (840)
+|++++++.. +-. ...++++++..|.+||||+||++.. |. ..+.+ ..++.+.+..+ .+ ...++
T Consensus 173 ~yi~~~g~~~~~~~----~~~l~~~~~~~~~drll~eTD~P~~~~~~~~~~~~g~~n~p~~~~~~~~~~-a~---~~g~~ 244 (264)
T 1xwy_A 173 IYIGITGWVCDERR----GLELRELLPLIPAEKLLIETDAPYLLPRDLTPKPSSRRNEPAHLPHILQRI-AH---WRGED 244 (264)
T ss_dssp CEEEECGGGGCTTT----SHHHHHHGGGSCGGGEEECCCTTSCCCTTCTTCCCSSCCCGGGHHHHHHHH-HH---HHTCC
T ss_pred eEEEECccccCCcC----cHHHHHHHHhCCHHHEEEecCCCCcCccccccccCCCCCchHHHHHHHHHH-HH---HHCcC
Confidence 9999998764 211 1357788889999999999995431 21 00100 01122222211 11 11466
Q ss_pred hhHHHHHHHHHHHHhHHHHhcCC
Q 003194 359 VGEAIEVAKDIFALNAAQFYKIN 381 (840)
Q Consensus 359 ~~ea~~~~~~Il~~NA~rly~l~ 381 (840)
. +.+.+|+++||+|+|+++
T Consensus 245 ~----e~~~~~~~~Na~rl~~l~ 263 (264)
T 1xwy_A 245 A----AWLAATTDANVKTLFGIA 263 (264)
T ss_dssp H----HHHHHHHHHHHHHHHCCC
T ss_pred H----HHHHHHHHHHHHHHhCcc
Confidence 4 578899999999999975
No 36
>2y1h_A Putative deoxyribonuclease tatdn3; hydrolase; 2.50A {Homo sapiens}
Probab=98.64 E-value=3e-07 Score=97.43 Aligned_cols=142 Identities=16% Similarity=0.152 Sum_probs=89.9
Q ss_pred hhhHHHHHHHHHHhhCCCcEEEeeCCCCCCCCcCCcChhhhHHHHhhcCCCCcEEEEeCCCCchHHHHHHHHHhCCEeEe
Q 003194 211 LIDYIFISSLEVAQFLDLPLQIHTGFGDKDLDLRLSNPLHLRAILEDKRFSKCRFVLLHASYPFSKEASYLAYVYPQVYL 290 (840)
Q Consensus 211 l~d~~l~~l~e~~~e~glPvq~H~G~gd~~~~~~~~~P~~L~~l~~~~~~P~l~~VllH~g~p~~~e~~~la~~~pNVyl 290 (840)
..+..|.+.+++|+++|+||.+|++.. .. .+-++++ ++|..++|+ |+-......+..+.. .|+|+
T Consensus 123 ~q~~~f~~~~~la~~~~lPv~iH~~~a---------~~-~~~~il~--~~~~~~~v~-H~~~g~~~~~~~~~~--~g~~i 187 (272)
T 2y1h_A 123 EQRQVLIRQIQLAKRLNLPVNVHSRSA---------GR-PTINLLQ--EQGAEKVLL-HAFDGRPSVAMEGVR--AGYFF 187 (272)
T ss_dssp HHHHHHHHHHHHHHHHTCCEEEECTTC---------HH-HHHHHHH--HTTCCSEEE-ETCCSCHHHHHHHHH--TTCEE
T ss_pred HHHHHHHHHHHHHHHhCCcEEEEeCCc---------HH-HHHHHHH--hCCCCCEEE-EccCCCHHHHHHHHH--CCCEE
Confidence 345578888999999999999999732 12 2335777 688788888 872112233334443 48999
Q ss_pred cccccCCCCcHHHHHHHHHHHHHHCCCCcEEEecCCCCCcccch--hhHHHHHHHHHHHHhhhhcCCCCChhHHHHHHHH
Q 003194 291 DFGLAIPKLSVQGMISSIKELLELAPTKKVMFSTDAYASPETYF--LGAKRAREVVFSVLRDTCIDEDLSVGEAIEVAKD 368 (840)
Q Consensus 291 d~s~~~~~~~~~g~~~~l~~~le~~~~~kilfgSD~~~~Pe~~~--~~~~~~R~~l~~~l~~~v~~g~l~~~ea~~~~~~ 368 (840)
+++++... . ..++++++..|.+|+|++||++..+..-. ....+....+. .+.+. ..++. +.+.+
T Consensus 188 ~~~g~~~~-~-----~~~~~~~~~~~~drll~eTD~P~~~p~~g~~~~p~~l~~~~~-~la~~---~g~~~----e~~~~ 253 (272)
T 2y1h_A 188 SIPPSIIR-S-----GQKQKLVKQLPLTSICLETDSPALGPEKQVRNEPWNISISAE-YIAQV---KGISV----EEVIE 253 (272)
T ss_dssp EECGGGGT-C-----HHHHHHHHHSCGGGEEECCCTTSSCSSTTSCCCGGGHHHHHH-HHHHH---HTSCH----HHHHH
T ss_pred EECCcccC-c-----HHHHHHHHhCCHHHEEEecCCCCCCCCCCCcCcHHHHHHHHH-HHHHH---HCcCH----HHHHH
Confidence 99987632 1 25788888999999999999653310000 00011222221 11111 14564 57889
Q ss_pred HHHHhHHHHhcCC
Q 003194 369 IFALNAAQFYKIN 381 (840)
Q Consensus 369 Il~~NA~rly~l~ 381 (840)
++++||+|+|++.
T Consensus 254 ~~~~N~~~l~~~~ 266 (272)
T 2y1h_A 254 VTTQNALKLFPKL 266 (272)
T ss_dssp HHHHHHHHHSTTH
T ss_pred HHHHHHHHHHHhH
Confidence 9999999999874
No 37
>1bf6_A Phosphotriesterase homology protein; hypothetical protein; 1.70A {Escherichia coli} SCOP: c.1.9.3
Probab=98.31 E-value=4e-06 Score=89.12 Aligned_cols=148 Identities=16% Similarity=0.133 Sum_probs=86.1
Q ss_pred HHHHHHHHHhhCCCcEEEeeCCCCCCCCcCCcChhhhHHHHhhcCCCCcEEEEeCCCCc-hHHHHHHHHHhCCEeEeccc
Q 003194 215 IFISSLEVAQFLDLPLQIHTGFGDKDLDLRLSNPLHLRAILEDKRFSKCRFVLLHASYP-FSKEASYLAYVYPQVYLDFG 293 (840)
Q Consensus 215 ~l~~l~e~~~e~glPvq~H~G~gd~~~~~~~~~P~~L~~l~~~~~~P~l~~VllH~g~p-~~~e~~~la~~~pNVyld~s 293 (840)
.|...+++|+++|+||++|++.+. ..+..+ .+++...+|..++++.|++++ ....+..++..--+|.++..
T Consensus 139 ~~~~~~~~a~~~~~pv~iH~~~~~-------~~~~~~-~~l~~~~~~~~~~~i~H~~~~~~~~~~~~~~~~G~~i~~~~~ 210 (291)
T 1bf6_A 139 VFIAAALAHNQTGRPISTHTSFST-------MGLEQL-ALLQAHGVDLSRVTVGHCDLKDNLDNILKMIDLGAYVQFDTI 210 (291)
T ss_dssp HHHHHHHHHHHHCCCEEEECGGGC-------SHHHHH-HHHHHTTCCGGGEEECCCCSSCCHHHHHHHHHTTCEEEECCT
T ss_pred HHHHHHHHHHHHCCeEEEeCCCCC-------ChHHHH-HHHHHcCCCchhEEEECCCCCCCHHHHHHHHHCCCEEEEccC
Confidence 466678899999999999997421 012223 445533567889999999653 33444455544334444432
Q ss_pred ccCCCCcHHHHHHHHHHHHHHCCCCcEEEecCCCCCccc-chhh---HHHHHHHHHHHHhhhhcCCCCChhHHHHHHHHH
Q 003194 294 LAIPKLSVQGMISSIKELLELAPTKKVMFSTDAYASPET-YFLG---AKRAREVVFSVLRDTCIDEDLSVGEAIEVAKDI 369 (840)
Q Consensus 294 ~~~~~~~~~g~~~~l~~~le~~~~~kilfgSD~~~~Pe~-~~~~---~~~~R~~l~~~l~~~v~~g~l~~~ea~~~~~~I 369 (840)
..............++++++.++.+|||++||++..+.. .+.+ ...++..+ ..+ +...++. +.+.++
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~dril~~TD~p~~~~~~~~~~~~~~~~~~~~~----~~l-~~~g~~~----~~~~~~ 281 (291)
T 1bf6_A 211 GKNSYYPDEKRIAMLHALRDRGLLNRVMLSMDITRRSHLKANGGYGYDYLLTTFI----PQL-RQSGFSQ----ADVDVM 281 (291)
T ss_dssp TCTTTSCHHHHHHHHHHHHHTTCGGGEEECCCCCSGGGSGGGTSCCTTHHHHTHH----HHH-HHTTCCH----HHHHHH
T ss_pred cccCCCCHHHHHHHHHHHHHhCCCCeEEEcCCCCCCccchhcCCCCHHHHHHHHH----HHH-HHcCCCH----HHHHHH
Confidence 211101111123478888999999999999996532210 0000 11112222 222 2223665 578999
Q ss_pred HHHhHHHHhc
Q 003194 370 FALNAAQFYK 379 (840)
Q Consensus 370 l~~NA~rly~ 379 (840)
+.+|++|+|+
T Consensus 282 ~~~N~~rl~~ 291 (291)
T 1bf6_A 282 LRENPSQFFQ 291 (291)
T ss_dssp HTHHHHHHCC
T ss_pred HHHhHHHHhC
Confidence 9999999985
No 38
>2xio_A Putative deoxyribonuclease tatdn1; hydrolase; 1.19A {Homo sapiens}
Probab=98.31 E-value=3.8e-06 Score=90.51 Aligned_cols=143 Identities=17% Similarity=0.180 Sum_probs=84.4
Q ss_pred hhhHHHHHHHHHHhhCCCcEEEeeCCCCCCCCcCCcChhhhHHHHhhcCCC-CcEEEEeCCCCchHHHHHHHHHhCCEeE
Q 003194 211 LIDYIFISSLEVAQFLDLPLQIHTGFGDKDLDLRLSNPLHLRAILEDKRFS-KCRFVLLHASYPFSKEASYLAYVYPQVY 289 (840)
Q Consensus 211 l~d~~l~~l~e~~~e~glPvq~H~G~gd~~~~~~~~~P~~L~~l~~~~~~P-~l~~VllH~g~p~~~e~~~la~~~pNVy 289 (840)
.....|.+.+++|.++|+||.+|++-. ...+-++++ ++| +...++.|+-.....++..+.. .|+|
T Consensus 124 ~Q~~~f~~ql~lA~~~~lPv~iH~r~a----------~~~~~~il~--~~~~~~~~~i~H~f~g~~~~~~~~l~--~g~y 189 (301)
T 2xio_A 124 TQLKYFEKQFELSEQTKLPMFLHCRNS----------HAEFLDITK--RNRDRCVGGVVHSFDGTKEAAAALID--LDLY 189 (301)
T ss_dssp HHHHHHHHTHHHHHHHCCCEEEEEESC----------HHHHHHHHH--HTGGGSSCEEETTCCCCHHHHHHHHH--TTCE
T ss_pred HHHHHHHHHHHHHHHhCCcEEEEecCc----------hHHHHHHHH--hccCCCCcEEEEccCCCHHHHHHHHh--cCcE
Confidence 344567888999999999999999631 223345666 454 2223448982112233333332 3899
Q ss_pred ecccccCCCCcHHHHHHHHHHHHHHCCCCcEEEecCCCCC----------------ccc--c-----h---hhHHHHHHH
Q 003194 290 LDFGLAIPKLSVQGMISSIKELLELAPTKKVMFSTDAYAS----------------PET--Y-----F---LGAKRAREV 343 (840)
Q Consensus 290 ld~s~~~~~~~~~g~~~~l~~~le~~~~~kilfgSD~~~~----------------Pe~--~-----~---~~~~~~R~~ 343 (840)
+++++.. .- . . ...++++..|.+|||++||++.. |.. . + ....+....
T Consensus 190 i~~~g~~-~~-~-~---~~~~~~~~~p~drlLleTD~P~~~~~~~~~~~~~l~~~~p~~~~~~~g~~~~~~n~p~~v~~~ 263 (301)
T 2xio_A 190 IGFNGCS-LK-T-E---ANLEVLKSIPSEKLMIETDAPWCGVKSTHAGSKYIRTAFPTKKKWESGHCLKDRNEPCHIIQI 263 (301)
T ss_dssp EEECGGG-SS-S-H---HHHHHHHTSCGGGEEECCCTTSCCCCTTSTTGGGCCCCCCEESSCCTTSEETTCCCGGGHHHH
T ss_pred EEEcccc-cC-C-h---HHHHHHHhCChHHEEEecCCCcccccccccccccccccCcccccccccccCCCCCChHHHHHH
Confidence 9999862 21 1 1 12477888999999999996542 210 0 0 000111222
Q ss_pred HHHHHhhhhcCCCCChhHHHHHHHHHHHHhHHHHhcCC
Q 003194 344 VFSVLRDTCIDEDLSVGEAIEVAKDIFALNAAQFYKIN 381 (840)
Q Consensus 344 l~~~l~~~v~~g~l~~~ea~~~~~~Il~~NA~rly~l~ 381 (840)
+ +.+.+. ..++. +.+.+++++||+|+|++.
T Consensus 264 ~-~~ia~l---~g~~~----e~~~~~~~~Na~rlf~~~ 293 (301)
T 2xio_A 264 L-EIMSAV---RDEDP----LELANTLYNNTIKVFFPV 293 (301)
T ss_dssp H-HHHHHH---HTCCH----HHHHHHHHHHHHHHHCCC
T ss_pred H-HHHHHH---HCcCH----HHHHHHHHHHHHHHhCch
Confidence 2 122221 14564 678999999999999975
No 39
>3rcm_A TATD family hydrolase; HET: CIT; 2.05A {Pseudomonas putida}
Probab=98.24 E-value=2.5e-06 Score=91.22 Aligned_cols=152 Identities=17% Similarity=0.099 Sum_probs=88.7
Q ss_pred hhHHHHHHHHHHhhCCCcEEEeeCCCCCCCCcCCcChhhhHHHHhhcCCCC--cEEEEeCCCCchHHHHHHHHHhCCEeE
Q 003194 212 IDYIFISSLEVAQFLDLPLQIHTGFGDKDLDLRLSNPLHLRAILEDKRFSK--CRFVLLHASYPFSKEASYLAYVYPQVY 289 (840)
Q Consensus 212 ~d~~l~~l~e~~~e~glPvq~H~G~gd~~~~~~~~~P~~L~~l~~~~~~P~--l~~VllH~g~p~~~e~~~la~~~pNVy 289 (840)
....|...+++|.++|+||.+|+.-. ...+-++++ +++. .++|+ |+-..-..++..+.. -++|
T Consensus 112 Q~~~F~~ql~lA~e~~lPv~iH~r~a----------~~~~l~il~--~~~~~~~~~V~-H~fsG~~e~a~~~l~--~G~y 176 (287)
T 3rcm_A 112 QEKALEAQLTLAAQLRLPVFLHERDA----------SERLLAILK--DYRDHLTGAVV-HCFTGEREALFAYLD--LDLH 176 (287)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEEEESC----------HHHHHHHHH--TTGGGCSCEEE-CSCCCCHHHHHHHHH--TTCE
T ss_pred HHHHHHHHHHHHHHhCCCEEEEcCCc----------HHHHHHHHH--HcCCCCCeEEE-EeCCCCHHHHHHHHH--CCcE
Confidence 34456777899999999999999632 123445677 5543 34554 872112233333332 3799
Q ss_pred ecccccCCCCcHHHHHHHHHHHHHHCCCCcEEEecCCCCCcccch----hh----HHHHHHHHHHHHhhhhcCCCCChhH
Q 003194 290 LDFGLAIPKLSVQGMISSIKELLELAPTKKVMFSTDAYASPETYF----LG----AKRAREVVFSVLRDTCIDEDLSVGE 361 (840)
Q Consensus 290 ld~s~~~~~~~~~g~~~~l~~~le~~~~~kilfgSD~~~~Pe~~~----~~----~~~~R~~l~~~l~~~v~~g~l~~~e 361 (840)
+++++++.+. +. ...+++++...|.+|||+.||+++.+...+ .+ ..+...++. .+.+ ...++.
T Consensus 177 is~~g~i~~~-k~--~~~l~~~v~~ip~drlLlETD~P~l~p~~~~~~~rg~~n~P~~l~~v~~-~lA~---~~g~s~-- 247 (287)
T 3rcm_A 177 IGITGWICDE-RR--GTHLHPLVGNIPEGRLMLESDAPYLLPRSLRPKPKSGRNEPAFLPEVLR-EVAL---HRGESA-- 247 (287)
T ss_dssp EEECGGGGCT-TT--CGGGHHHHTTSCTTSEEECCCTTSCCCTTCSSCCTTCCCCGGGHHHHHH-HHHH---HHTSCH--
T ss_pred EEECchhccc-cC--HHHHHHHHHhcCCccEEEeccCCccCccccccccCCCcCCHHHHHHHHH-HHHH---HhCcCH--
Confidence 9999876431 11 125678888999999999999754321111 00 001222221 1111 124565
Q ss_pred HHHHHHHHHHHhHHHHhcCCCCccccCC
Q 003194 362 AIEVAKDIFALNAAQFYKINLGVKDFAS 389 (840)
Q Consensus 362 a~~~~~~Il~~NA~rly~l~~~~~~~~~ 389 (840)
+.+..+++.|++|+|+++....-|+|
T Consensus 248 --eev~~~~~~N~~rlf~l~~~~~~~~~ 273 (287)
T 3rcm_A 248 --EHTAAHTTATARDFFQLPAENLYFQS 273 (287)
T ss_dssp --HHHHHHHHHHHHHHTTCCCCC-----
T ss_pred --HHHHHHHHHHHHHHHCCChhhhHHhh
Confidence 57889999999999999766544433
No 40
>2vc7_A Aryldialkylphosphatase; phosphotriesterase, promiscuous activities, enzyme evolution, hyperthermophilic, lactonase, hydrolase; HET: KCX GOL HT5; 2.05A {Sulfolobus solfataricus} PDB: 2vc5_A*
Probab=98.08 E-value=1.6e-05 Score=85.68 Aligned_cols=148 Identities=14% Similarity=0.072 Sum_probs=85.1
Q ss_pred HHHHHHHHHhhCCCcEEEeeC-CCCCCCCcCCcChhhhHHHHhhcCCCCcEEEEeCCCC-chHHHHHHHHHhCCEeEecc
Q 003194 215 IFISSLEVAQFLDLPLQIHTG-FGDKDLDLRLSNPLHLRAILEDKRFSKCRFVLLHASY-PFSKEASYLAYVYPQVYLDF 292 (840)
Q Consensus 215 ~l~~l~e~~~e~glPvq~H~G-~gd~~~~~~~~~P~~L~~l~~~~~~P~l~~VllH~g~-p~~~e~~~la~~~pNVyld~ 292 (840)
.|...+++|.++|+||.+|++ .+.. .+..+ +++++..+|..++++.|+.. .-..++..++..--++.++.
T Consensus 152 ~~~~~~~lA~~~~~pv~iH~~~~~~~-------~~~~~-~~l~~~~~~~~~~~i~H~~~~~~~~~~~~~~~~G~~i~~~~ 223 (314)
T 2vc7_A 152 VIRAAAIANKETKVPIITHSNAHNNT-------GLEQQ-RILTEEGVDPGKILIGHLGDTDNIDYIKKIADKGSFIGLDR 223 (314)
T ss_dssp HHHHHHHHHHHHCCCEEEECCTTTTH-------HHHHH-HHHHHTTCCGGGEEETTGGGCCCHHHHHHHHHTTCEEEECC
T ss_pred HHHHHHHHHHHHCCEEEEeCCCcccC-------hHHHH-HHHHHcCCCcccEEEECCCCCCCHHHHHHHHHcCCEEEEeC
Confidence 456678889999999999997 2211 12233 45553356778999999953 22344555554433444553
Q ss_pred cccCCCCcHHHHHHHHHHHHHHCCCCcEEEecCCCCCccc----chhhH---------HHHHHHHHHHHhhhhcCCCCCh
Q 003194 293 GLAIPKLSVQGMISSIKELLELAPTKKVMFSTDAYASPET----YFLGA---------KRAREVVFSVLRDTCIDEDLSV 359 (840)
Q Consensus 293 s~~~~~~~~~g~~~~l~~~le~~~~~kilfgSD~~~~Pe~----~~~~~---------~~~R~~l~~~l~~~v~~g~l~~ 359 (840)
.++..+.......+.+..+++.++.+|||++||++..|.. .++.. .+.++.+ ... +...++.
T Consensus 224 ~~~~~~~~~~~~~~~i~~~~~~g~~drilleTD~~~~~~~~~~~p~~~~~g~~~~~~~~~~~~~~----~~l-~~~g~~~ 298 (314)
T 2vc7_A 224 YGLDLFLPVDKRNETTLRLIKDGYSDKIMISHDYCCTIDWGTAKPEYKPKLAPRWSITLIFEDTI----PFL-KRNGVNE 298 (314)
T ss_dssp TTCTTTSCHHHHHHHHHHHHHTTCTTTEEECCCCBSSBCCGGGCTTSHHHHCTTCSTTHHHHTHH----HHH-HHTTCCH
T ss_pred CCcccCCCHHHHHHHHHHHHHcCCCCeEEEcCCccccccccccchhhhhcCCCCcCHHHHHHHHH----HHH-HHcCCCH
Confidence 2232121222344567777777677999999997533200 01100 0122222 111 2224564
Q ss_pred hHHHHHHHHHHHHhHHHHhc
Q 003194 360 GEAIEVAKDIFALNAAQFYK 379 (840)
Q Consensus 360 ~ea~~~~~~Il~~NA~rly~ 379 (840)
+.+.+++++|++|+|+
T Consensus 299 ----e~~~~~~~~N~~rlf~ 314 (314)
T 2vc7_A 299 ----EVIATIFKENPKKFFS 314 (314)
T ss_dssp ----HHHHHHHTHHHHHHTC
T ss_pred ----HHHHHHHHHCHHHHhC
Confidence 6789999999999985
No 41
>3ovg_A Amidohydrolase; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, NYSGXRC, HAD, PSI; HET: KCX; 2.06A {Mycoplasma synoviae} PDB: 3msr_A*
Probab=98.05 E-value=2.5e-05 Score=86.14 Aligned_cols=154 Identities=16% Similarity=0.056 Sum_probs=91.1
Q ss_pred HHHHHHHHHhhCCCcEEEeeCCCCCCCCcCCcChhhhHHHHhhcCCCCcEEEEeCCC-CchHHHHHHHH-HhCCEeEecc
Q 003194 215 IFISSLEVAQFLDLPLQIHTGFGDKDLDLRLSNPLHLRAILEDKRFSKCRFVLLHAS-YPFSKEASYLA-YVYPQVYLDF 292 (840)
Q Consensus 215 ~l~~l~e~~~e~glPvq~H~G~gd~~~~~~~~~P~~L~~l~~~~~~P~l~~VllH~g-~p~~~e~~~la-~~~pNVyld~ 292 (840)
.|..-++++.++|+||.+|++.+.. + ...+ +++++...|..++++.|++ ......+..++ .. ..|+++
T Consensus 170 ~f~aq~~~A~e~glPViiH~r~gr~------a-~d~l-~iL~e~g~~~~~vvi~H~~~~~~~~~a~~~l~~~--G~yI~f 239 (363)
T 3ovg_A 170 ALEVAARTSILTGCPILVHTQLGTM------A-LEVA-KHLIGFGANPDKIQISHLNKNPDKYYYEKVIKET--GVTLCF 239 (363)
T ss_dssp HHHHHHHHHHHHCCCEEEEEETTCS------H-HHHH-HHHHHHTCCGGGEEEECGGGSCCHHHHHHHHHHH--CCEEEE
T ss_pred HHHHHHHHHHHhCCEEEEeCCCCCC------H-HHHH-HHHHhcCCCCCcEEEEcCCCCCCHHHHHHHHHHC--CcEEEE
Confidence 3445567888999999999986411 1 1233 5565435676789999995 23333333333 21 477777
Q ss_pred cccCCC--CcHHHHHHHHHHHHHHCCCCcEEEecCCCCCcccchhhHH------HHHHHHHHHHhhhhcCCCCChhHHHH
Q 003194 293 GLAIPK--LSVQGMISSIKELLELAPTKKVMFSTDAYASPETYFLGAK------RAREVVFSVLRDTCIDEDLSVGEAIE 364 (840)
Q Consensus 293 s~~~~~--~~~~g~~~~l~~~le~~~~~kilfgSD~~~~Pe~~~~~~~------~~R~~l~~~l~~~v~~g~l~~~ea~~ 364 (840)
++...+ .....-.+.++++++.++.+|||++||++..|...+.+.. .. ..+..++...++...++. +
T Consensus 240 ~g~~~~~~~~~~~ra~~l~~lv~~~p~drILleTDap~~~~l~~~G~~~g~~~n~p-~~l~~~~~~~a~~rGis~----e 314 (363)
T 3ovg_A 240 DGPDRVKYYPDSLLAENIKYLVDKGLQKHITLSLDAGRILYQRNYGLTKGKQTFGL-AYLFDRFLPLLKQVGVSK----E 314 (363)
T ss_dssp CCTTCTTTCCHHHHHHHHHHHHHTTCGGGEEECCCCCSGGGSHHHHHHTTEECCCT-HHHHHTHHHHHHHHTCCH----H
T ss_pred CCeeccccCChhHHHHHHHHHHHhcCCCeEEEeCCCCCCcCCCCCCccCCCCCCCc-cHHHHHHHHHHHHcCCCH----H
Confidence 764311 1111123578899999999999999998643311111110 00 001111222223335665 5
Q ss_pred HHHHHHHHhHHHHhcCCCC
Q 003194 365 VAKDIFALNAAQFYKINLG 383 (840)
Q Consensus 365 ~~~~Il~~NA~rly~l~~~ 383 (840)
.+.+++.+|++|+|++...
T Consensus 315 ei~~it~~Np~rlf~l~~~ 333 (363)
T 3ovg_A 315 AIFDILVNNPKRVLAFDEK 333 (363)
T ss_dssp HHHHHHTHHHHHHTSCCCC
T ss_pred HHHHHHHHHHHHHHCCCCc
Confidence 7899999999999999644
No 42
>3gg7_A Uncharacterized metalloprotein; structural genomics, unknown function, plasmid, PSI-2, protein structure initiative; 1.50A {Deinococcus radiodurans} SCOP: c.1.9.0
Probab=98.01 E-value=1e-05 Score=84.92 Aligned_cols=143 Identities=14% Similarity=0.035 Sum_probs=85.3
Q ss_pred hhHHHHHHHHHHhhCCCcEE-EeeCCCCCCCCcCCcChhhhHHHHhhcCCCCcEEEEeCCCCchHHHHHHHHHhCCEeEe
Q 003194 212 IDYIFISSLEVAQFLDLPLQ-IHTGFGDKDLDLRLSNPLHLRAILEDKRFSKCRFVLLHASYPFSKEASYLAYVYPQVYL 290 (840)
Q Consensus 212 ~d~~l~~l~e~~~e~glPvq-~H~G~gd~~~~~~~~~P~~L~~l~~~~~~P~l~~VllH~g~p~~~e~~~la~~~pNVyl 290 (840)
....|...+++|.++++||. +|+.-. ...+-++++ ++|...-++.|+-..-..++..+.. -++|+
T Consensus 102 Q~~~F~~ql~lA~e~~lPviSiH~r~a----------~~~~~~il~--~~~~~~~~v~H~fsG~~e~a~~~l~--~G~yi 167 (254)
T 3gg7_A 102 QFAVFQHILRRCEDHGGRILSIHSRRA----------ESEVLNCLE--ANPRSGTPILHWYSGSVTELRRAIS--LGCWF 167 (254)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEECTTC----------HHHHHHHHH--HCGGGEEEEEETCCSCHHHHHHHHH--TTCEE
T ss_pred HHHHHHHHHHHHHHcCCCEEEEEcCCc----------HHHHHHHHH--HcCCCCcEEEEeCCCCHHHHHHHHc--CCcEE
Confidence 33456777899999999999 999632 123446677 5664432344872112233333332 37999
Q ss_pred cccccCCCCcHHHHHHHHHHHHHHCCCCcEEEecCCCCCcccch-hhHHHHHHHHHHHHhhhhcCCCCChhHHHHHHHHH
Q 003194 291 DFGLAIPKLSVQGMISSIKELLELAPTKKVMFSTDAYASPETYF-LGAKRAREVVFSVLRDTCIDEDLSVGEAIEVAKDI 369 (840)
Q Consensus 291 d~s~~~~~~~~~g~~~~l~~~le~~~~~kilfgSD~~~~Pe~~~-~~~~~~R~~l~~~l~~~v~~g~l~~~ea~~~~~~I 369 (840)
++++++.. ...+++++...|.+|||+.||+++.|...- ....+....+ +.+.+. ..++. +.+..+
T Consensus 168 s~~g~~~~------~~~~~~~v~~ip~drlLlETD~P~~~~rg~~n~P~~v~~v~-~~iA~~---~g~~~----ee~~~~ 233 (254)
T 3gg7_A 168 SVGPTMVR------TQKGAALIRSMPRDRVLTETDGPFLELDGQAALPWDVKSVV-EGLSKI---WQIPA----SEVERI 233 (254)
T ss_dssp EECHHHHT------SHHHHHHHHHSCGGGEEECCCTTTSEETTEECCGGGHHHHH-HHHHHH---HTSCH----HHHHHH
T ss_pred EECcccCc------hHHHHHHHHHcCCCeEEEeCCCCccccCCCCCCHHHHHHHH-HHHHHH---hCcCH----HHHHHH
Confidence 99886531 135678889999999999999765431000 0001122222 112211 24564 578899
Q ss_pred HHHhHHHHhcCCC
Q 003194 370 FALNAAQFYKINL 382 (840)
Q Consensus 370 l~~NA~rly~l~~ 382 (840)
+++|++++|+++.
T Consensus 234 ~~~N~~~lf~~~~ 246 (254)
T 3gg7_A 234 VKENVSRLLGTVR 246 (254)
T ss_dssp HHHHHHHHHHC--
T ss_pred HHHHHHHHHCCCc
Confidence 9999999999864
No 43
>1r8g_A Hypothetical protein YBDK; structural genomics, unknown function, carboxylate-amine ligase, structure 2 function project, S2F; 2.15A {Escherichia coli} SCOP: d.128.1.3 PDB: 1tt4_A
Probab=97.87 E-value=0.00017 Score=80.04 Aligned_cols=95 Identities=18% Similarity=0.214 Sum_probs=69.4
Q ss_pred eeeccCCCCCceEEecCcc-hHHHHHhHHHHHHHHHHHHHHHcCCee---Eecc-----------ccc------------
Q 003194 583 EQLHAEAGKGQFEIALGHT-VAAKAADNLIFTREVLRAVARKHGLLA---TFVP-----------KFA------------ 635 (840)
Q Consensus 583 e~~h~E~gpGQ~Ei~l~~~-~~l~aaD~~~~~r~~ik~vA~~~Gl~A---TFmp-----------KP~------------ 635 (840)
..+..|..-+|.|++.+|+ +.-++.+.+...+..++++|.++|... .+.| ||.
T Consensus 48 ~~it~E~~~~qlEl~t~p~~~~~e~~~~L~~~~~~~~~~a~~~g~~l~~~g~~P~~~~~~~~i~~~~rY~~l~~~~g~~~ 127 (372)
T 1r8g_A 48 GEVKHDITESMLELATDVCRDINQAAGQFSAMQKVVLQAATDHHLEICGGGTHPFQKWQRQEVCDNERYQRTLENFGYLI 127 (372)
T ss_dssp SEEEECSSSSEEEEECCSBSSHHHHHHHHHHHHHHHHHHHHHTTCEEECCSBCSSCCC----------------CCGGGG
T ss_pred CcccchhhccEEEecCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEecCCCCCCCCccCCCCCchHHHHHHHHHHHHH
Confidence 4688899999999999997 567789999999999999999988764 3444 331
Q ss_pred CCCCCcccccccccccCCCcccccCCCCCcCCCcHHHHHHHHHHHHhHHhhhhhcCCCC
Q 003194 636 LDDIGSGSHVHLSLWQNGENVFMASDSSSKHGMSSVGEKFMAGVLHHLSSILAFTAPVP 694 (840)
Q Consensus 636 ~~~~GsG~H~H~Sl~~~g~n~f~~~d~~~~~~lS~~~~~fiaGlL~h~~al~a~~~Pt~ 694 (840)
....-+|+|+|+|+-+. +..-..+-.++.++|-++++++.++
T Consensus 128 ~~~~i~g~hvhv~~~~~-----------------~~~~~~~~~~~~~~p~l~aL~anSP 169 (372)
T 1r8g_A 128 QQATVFGQHVHVGCASG-----------------DDAIYLLHGLSRFVPHFIALSAASP 169 (372)
T ss_dssp CSCCBCEEEEEEECSSH-----------------HHHHHHHHHHHTTHHHHHHHHCCBC
T ss_pred HhhceeeEEEEeCCCCH-----------------HHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 11133899999999431 1233445667777888888887664
No 44
>3k2g_A Resiniferatoxin-binding, phosphotriesterase- related protein; TIM barrel, binuclear zinc, protein structure initiative II (PSI II); 1.80A {Rhodobacter sphaeroides 2}
Probab=97.87 E-value=9e-05 Score=81.84 Aligned_cols=149 Identities=15% Similarity=0.183 Sum_probs=88.4
Q ss_pred HHHHHHHHhhCCCcEEEee-CCCCCCCCcCCcChhhhHHHHhhcCCCCcEEEEeCCCC-c-hHHHHHHHHHhCCEeEecc
Q 003194 216 FISSLEVAQFLDLPLQIHT-GFGDKDLDLRLSNPLHLRAILEDKRFSKCRFVLLHASY-P-FSKEASYLAYVYPQVYLDF 292 (840)
Q Consensus 216 l~~l~e~~~e~glPvq~H~-G~gd~~~~~~~~~P~~L~~l~~~~~~P~l~~VllH~g~-p-~~~e~~~la~~~pNVyld~ 292 (840)
|..-.+++.++|+||.+|+ |.++. ...+-.++++...|..++++.||.. . -..++..++.. .+|+++
T Consensus 192 f~aq~~~A~~~glPV~iH~~gr~~a--------~~e~l~iL~e~g~~~~~vvi~H~~~s~~~~e~a~~~l~~--G~~I~f 261 (364)
T 3k2g_A 192 LRGAARAQVRTGLPLMVHLPGWFRL--------AHRVLDLVEEEGADLRHTVLCHMNPSHMDPVYQATLAQR--GAFLEF 261 (364)
T ss_dssp HHHHHHHHHHHCCCEEEECCTTSCC--------HHHHHHHHHHTTCCGGGEEECCCGGGTTCHHHHHHHHHH--TCEEEE
T ss_pred HHHHHHHHHHHCCeEEEecCCCCcc--------HHHHHHHHHHcCCCCCceEEECCCCCCCCHHHHHHHHhC--CcEEEe
Confidence 3444677889999999997 44321 2223335554355666799999941 2 22334444432 578777
Q ss_pred ccc-----CCCC-----cHHHHHHHHHHHHHHCCCCcEEEecCCCCCcccc-hhh---HHHHHHHHHHHHhhhhcCCCCC
Q 003194 293 GLA-----IPKL-----SVQGMISSIKELLELAPTKKVMFSTDAYASPETY-FLG---AKRAREVVFSVLRDTCIDEDLS 358 (840)
Q Consensus 293 s~~-----~~~~-----~~~g~~~~l~~~le~~~~~kilfgSD~~~~Pe~~-~~~---~~~~R~~l~~~l~~~v~~g~l~ 358 (840)
++. |+.. +.....+.++++++.++.+|||++||++..|... +.+ ...++... ..+ +...++
T Consensus 262 ~g~gt~~~f~~~~~~~~~d~~ra~~l~~lv~~gp~drilleTD~p~~~~~~~~gg~~~~~l~~~~~----~~l-~~~Gis 336 (364)
T 3k2g_A 262 DMIGMDFFYADQGVQCPSDDEVARAILGLADHGYLDRILLSHDVFVKMMLTRYGGNGYAFVTKHFL----PRL-RRHGLD 336 (364)
T ss_dssp CCTTCCCEETTTTEECCCHHHHHHHHHHHHHTTCGGGEEECCCCCSGGGSGGGTSCTTSHHHHHHH----HHH-HHTTCC
T ss_pred cCCcccccccccccccccHHHHHHHHHHHHHhCCcccEEEeCCCCCCCCCCCCCCCCcchHHHHHH----HHH-HHcCCC
Confidence 764 2210 0011235788999999999999999986433111 111 11122222 111 123467
Q ss_pred hhHHHHHHHHHHHHhHHHHhcCCCC
Q 003194 359 VGEAIEVAKDIFALNAAQFYKINLG 383 (840)
Q Consensus 359 ~~ea~~~~~~Il~~NA~rly~l~~~ 383 (840)
. +.+.+++.+|++|+|++...
T Consensus 337 ~----eei~~~~~~Np~rlf~l~~~ 357 (364)
T 3k2g_A 337 D----AALETLMVTNPRRVFDASIE 357 (364)
T ss_dssp H----HHHHHHHTHHHHHHHCTTSC
T ss_pred H----HHHHHHHHHHHHHHhCCCcc
Confidence 5 57999999999999998643
No 45
>3pnz_A Phosphotriesterase family protein; amidohydrolase fold; HET: KCX; 1.60A {Listeria monocytogenes serotype 4b strorganism_taxid} SCOP: c.1.9.0
Probab=97.80 E-value=9.8e-05 Score=80.40 Aligned_cols=151 Identities=15% Similarity=0.133 Sum_probs=88.1
Q ss_pred HHHHHHHHhhCCCcEEEeeCCCCCCCCcCCcChhhhHHHHhhcCCCCcEEEEeCCC-CchHHHHHHHHHhCCEeEecccc
Q 003194 216 FISSLEVAQFLDLPLQIHTGFGDKDLDLRLSNPLHLRAILEDKRFSKCRFVLLHAS-YPFSKEASYLAYVYPQVYLDFGL 294 (840)
Q Consensus 216 l~~l~e~~~e~glPvq~H~G~gd~~~~~~~~~P~~L~~l~~~~~~P~l~~VllH~g-~p~~~e~~~la~~~pNVyld~s~ 294 (840)
|..-++++.++|+||.+|++.+.. + ...+ +++++...|..++++.||. ..-...+..++. -.+|+++++
T Consensus 170 f~aq~~~A~~~glPViiH~r~g~~------a-~~~l-~iL~e~~~~~~~vvi~H~~~s~~~e~a~~~l~--~G~~i~~~g 239 (330)
T 3pnz_A 170 IRAVARAHHETKAPIHSHTEAGTM------A-LEQI-EILKQENIPLEYLSIGHMDRNLDPYYHKQVAK--TGAFMSFDG 239 (330)
T ss_dssp HHHHHHHHHHHCCCEEEECGGGCC------H-HHHH-HHHHHTTCCGGGEEETTGGGSCCHHHHHHHHT--TTCEEEECC
T ss_pred HHHHHHHHHHHCCeEEEeCCCCcC------h-HHHH-HHHHHcCCCCCeEEEecCCCCCCHHHHHHHHH--cCcEEEEcc
Confidence 344467788999999999985411 1 1123 4555435566789999994 222333344443 258999887
Q ss_pred cCCCC-cHHH-HHHHHHHHHHHCCCCcEEEecCCCCCcccchh--h---HHHHHHHHHHHHhhhhcCCCCChhHHHHH-H
Q 003194 295 AIPKL-SVQG-MISSIKELLELAPTKKVMFSTDAYASPETYFL--G---AKRAREVVFSVLRDTCIDEDLSVGEAIEV-A 366 (840)
Q Consensus 295 ~~~~~-~~~g-~~~~l~~~le~~~~~kilfgSD~~~~Pe~~~~--~---~~~~R~~l~~~l~~~v~~g~l~~~ea~~~-~ 366 (840)
+.... .+.. ..+.++++++.++.+|||++||++.-+...+. + .......+.+ |.+.++...++. +. +
T Consensus 240 ~~t~~~~~~~~~~~~l~~lv~~g~~drilleTD~p~~~~~~~~G~~~~~~~~~~~~~~~-l~~~a~~~Gis~----ee~i 314 (330)
T 3pnz_A 240 IAKIKYAPESARIAAILYLVSEGFEDQILVSGDTARKTYYKHYGHGPGLEYIAKKWVPR-FIDEANEKGFDG----EKLV 314 (330)
T ss_dssp TTCTTTCCHHHHHHHHHHHHHTTCGGGEEECCCCCSGGGSHHHHCCSTTTHHHHTHHHH-HHHHHHHTTSCH----HHHH
T ss_pred CcccCCCChHHHHHHHHHHHHcCCCCeEEEeCCCCCCCCCCccCCCCCcchHHHHHHHH-HHHHHHHcCCCH----HHHH
Confidence 64211 1111 23468888999999999999997531100000 0 0011111211 111123345675 45 9
Q ss_pred HHHHHHhHHHHhcCC
Q 003194 367 KDIFALNAAQFYKIN 381 (840)
Q Consensus 367 ~~Il~~NA~rly~l~ 381 (840)
.+++.+|++|+|+++
T Consensus 315 ~~~t~~Np~rlf~l~ 329 (330)
T 3pnz_A 315 KKFFVDNPARCFTFK 329 (330)
T ss_dssp HHHHTHHHHHHSSCC
T ss_pred HHHHHHhHHHHhcCC
Confidence 999999999999985
No 46
>3gtx_A Organophosphorus hydrolase; mutant, amidohydrolase, alpha-beta barrel; HET: KCX; 1.62A {Deinococcus radiodurans} PDB: 2zc1_A* 3gti_A* 3gu9_A* 3gtf_A* 3gth_A* 3gu2_A* 3gu1_A* 3fdk_A* 3htw_A*
Probab=97.76 E-value=0.00012 Score=80.17 Aligned_cols=149 Identities=13% Similarity=0.093 Sum_probs=87.7
Q ss_pred HHHHHHHhhCCCcEEEeeCCCCCCCCcCCcChhhhHHHHhhcCCCCcEEEEeCCC-CchHHHHHHHHHhCCEeEeccccc
Q 003194 217 ISSLEVAQFLDLPLQIHTGFGDKDLDLRLSNPLHLRAILEDKRFSKCRFVLLHAS-YPFSKEASYLAYVYPQVYLDFGLA 295 (840)
Q Consensus 217 ~~l~e~~~e~glPvq~H~G~gd~~~~~~~~~P~~L~~l~~~~~~P~l~~VllH~g-~p~~~e~~~la~~~pNVyld~s~~ 295 (840)
..-++++.++|+||.+|+|.|.. + .. .-+++++...|..++++.|+. .....++..++. -..|++++++
T Consensus 176 ~aq~~lA~~~glPViiH~~~gr~------a-~~-~~~iL~~~~~~~~~~vi~H~~~~~~~e~a~~~l~--~G~~i~~~g~ 245 (339)
T 3gtx_A 176 RAAARVQRETGVPIITHTQEGQQ------G-PQ-QAELLTSLGADPARIMIGHMDGNTDPAYHRETLR--HGVSIAFDRI 245 (339)
T ss_dssp HHHHHHHHHHCCCEEEECSTTCC------H-HH-HHHHHHHTTCCGGGEEECCGGGCCCHHHHHHHHT--TTCEEEECCT
T ss_pred HHHHHHHHHHCCeEEEeCCCCcC------H-HH-HHHHHHHcCCCcccEEEEccCCCCCHHHHHHHHH--cCcEEEEccC
Confidence 34467788999999999987521 1 11 234666445677789999994 233344444443 2578887765
Q ss_pred CC--CC--cHH-HHHHHHHHHHHHCCCCcEEEecCCCCC--ccc-chhhHHHHH------HHHHHHHhhhhcCCCCChhH
Q 003194 296 IP--KL--SVQ-GMISSIKELLELAPTKKVMFSTDAYAS--PET-YFLGAKRAR------EVVFSVLRDTCIDEDLSVGE 361 (840)
Q Consensus 296 ~~--~~--~~~-g~~~~l~~~le~~~~~kilfgSD~~~~--Pe~-~~~~~~~~R------~~l~~~l~~~v~~g~l~~~e 361 (840)
.. +. ... .-...++++++.++.+|||++||++.. |.- .++.....+ ..+..++...++...++.
T Consensus 246 ~t~~~~~~p~~~~~~~~l~~li~~~~~drilleTD~p~~~~~~P~~~p~~~~~~~g~n~p~~l~~~~~~~~~~~Gis~-- 323 (339)
T 3gtx_A 246 GLQGMVGTPTDAERLSVLTTLLGEGYADRLLLSHDSIWHWLGRPPAIPEAALPAVKDWHPLHISDDILPDLRRRGITE-- 323 (339)
T ss_dssp TCCSSTTCCCHHHHHHHHHHHHHTTCGGGEEECCCCEEEESSSCCCCCGGGHHHHHTCSTTHHHHTHHHHHHHTTCCH--
T ss_pred ccccccCCCchHHHHHHHHHHHHhcCCCeEEEecCCCccccCCcccccccccccCCCCCchhHHHHHHHHHHHcCCCH--
Confidence 31 10 000 123478899999999999999997642 100 000010000 011122222333345675
Q ss_pred HHHHHHHHHHHhHHHHhc
Q 003194 362 AIEVAKDIFALNAAQFYK 379 (840)
Q Consensus 362 a~~~~~~Il~~NA~rly~ 379 (840)
+.+.+++..|++|+|+
T Consensus 324 --e~i~~~~~~Np~rlf~ 339 (339)
T 3gtx_A 324 --EQVGQMTVGNPARLFG 339 (339)
T ss_dssp --HHHHHHHTHHHHHHHC
T ss_pred --HHHHHHHHHHHHHHhC
Confidence 5799999999999985
No 47
>2ob3_A Parathion hydrolase; metalloenzyme, TIM barrel, nerve agents; HET: KCX BTB; 1.04A {Brevundimonas diminuta} PDB: 1psc_A* 1jgm_A* 3cak_A* 1ez2_A* 1eyw_A* 1hzy_A 1i0b_A 1i0d_A 1p6b_A* 1p6c_A* 2oql_A* 2o4q_A* 3cs2_A* 3e3h_A* 1qw7_A* 1dpm_A* 2o4m_A* 1pta_A 3c86_A* 2d2j_A ...
Probab=97.75 E-value=0.00013 Score=79.43 Aligned_cols=148 Identities=17% Similarity=0.097 Sum_probs=86.5
Q ss_pred HHHHHHHHhhCCCcEEEeeCC-CCCCCCcCCcChhhhHHHHhhcCCCCcEEEEeCCCC-chHHHHHHHHHhCCEeEeccc
Q 003194 216 FISSLEVAQFLDLPLQIHTGF-GDKDLDLRLSNPLHLRAILEDKRFSKCRFVLLHASY-PFSKEASYLAYVYPQVYLDFG 293 (840)
Q Consensus 216 l~~l~e~~~e~glPvq~H~G~-gd~~~~~~~~~P~~L~~l~~~~~~P~l~~VllH~g~-p~~~e~~~la~~~pNVyld~s 293 (840)
|....+++.++|+||.+|+|. +. .+. ..+ .+++....+..++++.||.. .-...+..++. -.+|++++
T Consensus 150 f~~q~~lA~~~glPv~iH~~~~~r------~a~-e~l-~iL~~~g~~~~~~~i~H~f~~~~~e~a~~~~~--~G~~i~~~ 219 (330)
T 2ob3_A 150 LKAAARASLATGVPVTTHTAASQR------DGE-QQA-AIFESEGLSPSRVCIGHSDDTDDLSYLTALAA--RGYLIGLD 219 (330)
T ss_dssp HHHHHHHHHHHCCCEEEECCGGGT------HHH-HHH-HHHHHTTCCGGGEEECSGGGCCCHHHHHHHHH--TTCEEEEC
T ss_pred HHHHHHHHHHhCCeEEEECCCCCC------CHH-HHH-HHHHHcCcCcccEEEeCCCCCCCHHHHHHHHh--CCCEEEeC
Confidence 344467888999999999972 21 011 123 35553234556888999831 22233333333 26888887
Q ss_pred --ccCCC--------------CcHHHHHHHHHHHHHHCCCCcEEEecCCCCCcccch---hhHH-------HHHHHHHHH
Q 003194 294 --LAIPK--------------LSVQGMISSIKELLELAPTKKVMFSTDAYASPETYF---LGAK-------RAREVVFSV 347 (840)
Q Consensus 294 --~~~~~--------------~~~~g~~~~l~~~le~~~~~kilfgSD~~~~Pe~~~---~~~~-------~~R~~l~~~ 347 (840)
++..+ .+...-...++++++.+|.+|||++||++.++. .+ .+.. .+...+..+
T Consensus 220 ~~G~~tf~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~p~drilleTD~p~~l~-~~~~~~g~~~~~n~pn~~~~~~~~~ 298 (330)
T 2ob3_A 220 HIPYSAIGLEDNASASALLGIRSWQTRALLIKALIDQGYMKQILVSNDWTFGFS-SYVTNIMDVMDRVNPDGMAFIPLRV 298 (330)
T ss_dssp CTTCCCTTCTTCHHHHHHHCSSCHHHHHHHHHHHHHTTCGGGEEECCCCCSEEC-SSSTTHHHHHHHHCTTGGGHHHHTH
T ss_pred CCccccccccccccccccccCCCHHHHHHHHHHHHHhCCCCeEEEeCCCCCCcc-cccccCCCcccccCCCCcchHHHHH
Confidence 54332 111111346889999999999999999764111 11 0111 111123333
Q ss_pred HhhhhcCCCCChhHHHHHHHHHHHHhHHHHhc
Q 003194 348 LRDTCIDEDLSVGEAIEVAKDIFALNAAQFYK 379 (840)
Q Consensus 348 l~~~v~~g~l~~~ea~~~~~~Il~~NA~rly~ 379 (840)
+.++.++ .++. +.+..++..|++|+|+
T Consensus 299 ia~l~~~-G~~~----eev~~~~t~N~~rlf~ 325 (330)
T 2ob3_A 299 IPFLREK-GVPQ----ETLAGITVTNPARFLS 325 (330)
T ss_dssp HHHHHHT-TCCH----HHHHHHHTHHHHHHHS
T ss_pred HHHHHHc-CCCH----HHHHHHHHHHHHHHhc
Confidence 4444443 3675 5788999999999998
No 48
>3rhg_A Putative phophotriesterase; hydrolase, amidohydrolase, zinc binding site, enzyme functio initiative, EFI; HET: SO4; 1.53A {Proteus mirabilis}
Probab=97.73 E-value=0.00014 Score=80.18 Aligned_cols=154 Identities=15% Similarity=0.136 Sum_probs=89.4
Q ss_pred HHHHHHHHhhC-CCcEEEee-CCCCCCCCcCCcChhhhHHHHhhc-CCCCcEEEEeCCCC--chHHHHHHHHHhCCEeEe
Q 003194 216 FISSLEVAQFL-DLPLQIHT-GFGDKDLDLRLSNPLHLRAILEDK-RFSKCRFVLLHASY--PFSKEASYLAYVYPQVYL 290 (840)
Q Consensus 216 l~~l~e~~~e~-glPvq~H~-G~gd~~~~~~~~~P~~L~~l~~~~-~~P~l~~VllH~g~--p~~~e~~~la~~~pNVyl 290 (840)
|..-.+++.++ |+||.+|+ +.++. ...+-.++++. ..|..++++.|+.. .-..++..++. -.+|+
T Consensus 181 f~aq~~~A~~~~glPV~iH~~r~~~a--------~~e~l~iL~e~~~~~~~~vvi~H~~rs~~~~e~a~~~l~--~G~~I 250 (365)
T 3rhg_A 181 LRAAALAQNNNPYASMNIHMPGWQRR--------GDEVLDILLTEMGCDPAKISLAHSDPSGKDIDYQCKMLD--RGVWL 250 (365)
T ss_dssp HHHHHHHHTTCTTCEEEEECCTTSCC--------HHHHHHHHTTTTCCCGGGEEESCCGGGTTCHHHHHHHHH--TTCEE
T ss_pred HHHHHHHHHHhcCCcEEEECCCCCcC--------HHHHHHHHHhccCCCCCceEEecCCCCCCCHHHHHHHHh--CCCEE
Confidence 34446788899 99999997 64322 22233455543 45656799999942 22233444443 25788
Q ss_pred ccccc-----CCCC----cHHHHHHHHHHHHHHCCCCcEEEecCCCCCcccchhhHHHHHHHHHHHHhhhhcCCCCChhH
Q 003194 291 DFGLA-----IPKL----SVQGMISSIKELLELAPTKKVMFSTDAYASPETYFLGAKRAREVVFSVLRDTCIDEDLSVGE 361 (840)
Q Consensus 291 d~s~~-----~~~~----~~~g~~~~l~~~le~~~~~kilfgSD~~~~Pe~~~~~~~~~R~~l~~~l~~~v~~g~l~~~e 361 (840)
++++. |+.. +...-.+.++++++.++.+|||++||++..+...+.+-......+. .+...++...++.
T Consensus 251 ~~~g~g~~~tf~~~~~~~~d~~~a~~l~~li~~g~~drilleTD~p~l~~~~~~G~~~~~~l~~-~~~~~~~~~Gis~-- 327 (365)
T 3rhg_A 251 EFDMIGLDISFPKEGAAPSVMDTVEAVATLIERGYGNQIVLSHDVFLKQMWAKNGGNGWGFVPN-VFLSLLAQRGIDK-- 327 (365)
T ss_dssp EECCTTCCCBCSSSCBCCCHHHHHHHHHHHHHTTCGGGEEECCCCCSGGGSGGGTSCTTTHHHH-THHHHHHHTTCCH--
T ss_pred EecCCCccccccccccccchHHHHHHHHHHHHhCCCCcEEEeCCCCCCCCCCcCCCCCchhHHH-HHHHHHHHcCCCH--
Confidence 77764 2210 0011234788999999999999999986644211110000001111 1111122235675
Q ss_pred HHHHHHHHHHHhHHHHhcCCCCc
Q 003194 362 AIEVAKDIFALNAAQFYKINLGV 384 (840)
Q Consensus 362 a~~~~~~Il~~NA~rly~l~~~~ 384 (840)
+.+.+++..|++|+|++...+
T Consensus 328 --e~i~~~~~~Np~rlf~l~~~~ 348 (365)
T 3rhg_A 328 --TIIDKLCIDNPANLLAAENLY 348 (365)
T ss_dssp --HHHHHHTTHHHHHHHHSCCSS
T ss_pred --HHHHHHHHHHHHHHHCCCCcc
Confidence 578999999999999986544
No 49
>3tn4_A Phosphotriesterase; lactonase, hydrolase; HET: KCX; 1.50A {Geobacillus kaustophilus} PDB: 3tnb_A* 3tn3_A* 3tn5_A* 3tn6_A* 3ojg_A* 3orw_A* 3f4c_A* 3f4d_A*
Probab=97.64 E-value=0.00056 Score=75.16 Aligned_cols=152 Identities=15% Similarity=0.103 Sum_probs=85.9
Q ss_pred HHHHHHHHHhhCCCcEEEeeCCCCCCCCcCCcChhhhHHHHhhcCCCCcEEEEeCCC-CchHHHHHHHHHhCCEeEeccc
Q 003194 215 IFISSLEVAQFLDLPLQIHTGFGDKDLDLRLSNPLHLRAILEDKRFSKCRFVLLHAS-YPFSKEASYLAYVYPQVYLDFG 293 (840)
Q Consensus 215 ~l~~l~e~~~e~glPvq~H~G~gd~~~~~~~~~P~~L~~l~~~~~~P~l~~VllH~g-~p~~~e~~~la~~~pNVyld~s 293 (840)
.|....+++.+.|+||.+|++.+.. .+..++-+.+. ..|--++|+.|++ ..-...+..++..--++.+|.-
T Consensus 194 ~frA~a~aa~etG~Pv~iHt~~~~~-------~~e~l~iL~ee-G~~~~~vvi~H~~~~~d~~~~~~~l~~G~yl~fD~i 265 (360)
T 3tn4_A 194 FFRAAARAQKETGAVIITHTQEGTM-------GPEQAAYLLEH-GADPKKIVIGHMCDNTDPDYHRKTLAYGVYIAFDRF 265 (360)
T ss_dssp HHHHHHHHHHHHCCEEEEECSTTCC-------HHHHHHHHHHT-TCCGGGEEECCGGGCCCHHHHHHHHTTTCEEEECCT
T ss_pred HHHHHHHHHHHhCCcEEEEcCcccC-------CHHHHHHHHHc-CCCCCceEEEcCCCCCCHHHHHHHHHcCCEEEEccc
Confidence 4455578889999999999986521 23345444443 4566788999952 2222223344443334555532
Q ss_pred ccCCCC--cHHH-HHHHHHHHHHHCCCCcEEEecCCC----CCcccchhhHHH------HHHHHHHHHhhhhcCCCCChh
Q 003194 294 LAIPKL--SVQG-MISSIKELLELAPTKKVMFSTDAY----ASPETYFLGAKR------AREVVFSVLRDTCIDEDLSVG 360 (840)
Q Consensus 294 ~~~~~~--~~~g-~~~~l~~~le~~~~~kilfgSD~~----~~Pe~~~~~~~~------~R~~l~~~l~~~v~~g~l~~~ 360 (840)
++.... ..+. -.+.++++++.++.+|||.+||+. ..|.......+. +-..+.+++..+.++ .++.
T Consensus 266 G~~~~~~~p~d~~r~~~l~~lv~~g~~drILLstDa~~~~~~~py~~p~p~r~~~~~~~y~~i~~~~ip~L~~~-Gvs~- 343 (360)
T 3tn4_A 266 GIQGMVGAPTDEERVRTLLALLRDGYEKQIMLSHDTVNVWLGRPFTLPEPFAEMMKNWHVEHLFVNIIPALKNE-GIRD- 343 (360)
T ss_dssp TCCCSTTCCCHHHHHHHHHHHHHTTCGGGEEECCCCEEEESSSCCCCCHHHHHHTTTCSTTHHHHTHHHHHHHT-TCCH-
T ss_pred ccccccCCCChHHHHHHHHHHHHhcCcceEEEecCCCcccccCCCCCcccccccCCCCCchhHHHHHHHHHHHc-CCCH-
Confidence 221111 1111 234788999999999999999961 112110000000 112334444444333 3564
Q ss_pred HHHHHHHHHHHHhHHHHhc
Q 003194 361 EAIEVAKDIFALNAAQFYK 379 (840)
Q Consensus 361 ea~~~~~~Il~~NA~rly~ 379 (840)
+.+++|+.+|++|+|-
T Consensus 344 ---e~I~~i~~~NP~rlfs 359 (360)
T 3tn4_A 344 ---EVLEQMFIGNPAALFS 359 (360)
T ss_dssp ---HHHHHHHTHHHHHHHC
T ss_pred ---HHHHHHHHHhHHHHhc
Confidence 6789999999999983
No 50
>3guw_A Uncharacterized protein AF_1765; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 3.20A {Archaeoglobus fulgidus dsm 4304}
Probab=97.63 E-value=2.2e-05 Score=82.76 Aligned_cols=138 Identities=19% Similarity=0.236 Sum_probs=76.9
Q ss_pred HHHHHHHHHhhCCCcEEEeeCCCCCCCCcCCcChhhhHHHHhhcCCCCcEEEEeCCCCchHHHHHHHHHhCCEeEeccc-
Q 003194 215 IFISSLEVAQFLDLPLQIHTGFGDKDLDLRLSNPLHLRAILEDKRFSKCRFVLLHASYPFSKEASYLAYVYPQVYLDFG- 293 (840)
Q Consensus 215 ~l~~l~e~~~e~glPvq~H~G~gd~~~~~~~~~P~~L~~l~~~~~~P~l~~VllH~g~p~~~e~~~la~~~pNVyld~s- 293 (840)
.|...+++|.++|+||.+|+..+.. ......+-++++....|..++++.|++..... .+.. -++|++++
T Consensus 111 ~f~~ql~lA~e~~lPv~iH~r~~~~-----~~a~~~~~~il~~~~~~~~~~vi~H~~~~~a~---~~l~--~G~yis~~~ 180 (261)
T 3guw_A 111 VLKSQLELAKRMDVPCIIHTPRGNK-----LKATRKTLEILESLDFPADLAVIDHVNFETLD---MVLE--TEYWIGLTV 180 (261)
T ss_dssp HHHHHHHHHHHHTCCEEEECCSSST-----THHHHHHHHHHHHTTCCTTSEEEESCCTTTHH---HHHT--SSSEEEEEC
T ss_pred HHHHHHHHHHHhCCeEEEEcCCCcc-----cchHHHHHHHHHHcCCCCCCEEEEeCCHHHHH---HHHh--CCEEEEecC
Confidence 4566789999999999999974310 01123455566643456677888999543332 2222 37899988
Q ss_pred --ccCCCCcHHHHHHHHHHHHHHCCCCcEEEecCCCCCcccchhhHHHHHHHHHHHHhhhhcCCCCChhHHHHHHHHHHH
Q 003194 294 --LAIPKLSVQGMISSIKELLELAPTKKVMFSTDAYASPETYFLGAKRAREVVFSVLRDTCIDEDLSVGEAIEVAKDIFA 371 (840)
Q Consensus 294 --~~~~~~~~~g~~~~l~~~le~~~~~kilfgSD~~~~Pe~~~~~~~~~R~~l~~~l~~~v~~g~l~~~ea~~~~~~Il~ 371 (840)
++..+ + ..++++...|.+|||+.||++.-|... .+..+.+. .+.+. . .+ + + +.++++
T Consensus 181 ~pg~~t~--~-----~~~~~v~~ipldrlLlETD~P~~pn~P----~~v~~~~~-~la~~--~-g~--~---~-v~~~~~ 239 (261)
T 3guw_A 181 QPGKLSA--E-----DAARIVAEHGPERFMLNSDAGYRDVEI----TTVAEAAV-KIEEA--V-GR--E---E-MEKVAR 239 (261)
T ss_dssp C--------------CCTTGGGGCC-CCEEEECCCCCC----------CCCCTT-HHHHH--C-TT--G---G-GGHHHH
T ss_pred CCCcccH--H-----HHHHHHHhCCcceEEEecCCCCCCCCH----HHHHHHHH-HHHhh--C-Ch--h---H-HHHHHH
Confidence 54422 1 125677889999999999965422100 01111110 01110 1 12 2 2 789999
Q ss_pred HhHHHHhcCCCC
Q 003194 372 LNAAQFYKINLG 383 (840)
Q Consensus 372 ~NA~rly~l~~~ 383 (840)
+||+|+|+++..
T Consensus 240 ~Na~rlf~~~~~ 251 (261)
T 3guw_A 240 ENARKFLRVLEA 251 (261)
T ss_dssp SSHHHHTTC---
T ss_pred HHHHHHHCCCch
Confidence 999999998643
No 51
>3ipw_A Hydrolase TATD family protein; niaid, ssgcid, seattle structural genomics center for infect disease, dysentery, liver abcess; 1.95A {Entamoeba histolytica hm-1}
Probab=97.04 E-value=0.0084 Score=64.86 Aligned_cols=139 Identities=12% Similarity=0.109 Sum_probs=79.7
Q ss_pred HHHHHHHHHhh-CCCcEEEeeCCCCCCCCcCCcChhhhHHHHhhcCCCCcEEEEeCCCCc-hHHHHHHHHHhCCEeEecc
Q 003194 215 IFISSLEVAQF-LDLPLQIHTGFGDKDLDLRLSNPLHLRAILEDKRFSKCRFVLLHASYP-FSKEASYLAYVYPQVYLDF 292 (840)
Q Consensus 215 ~l~~l~e~~~e-~glPvq~H~G~gd~~~~~~~~~P~~L~~l~~~~~~P~l~~VllH~g~p-~~~e~~~la~~~pNVyld~ 292 (840)
.|..-+++|.+ +++||.+|+--. . ..+-++++....+..+.|+ |+ +. -..++..+.. -++|+++
T Consensus 155 ~F~~ql~lA~e~~~lPviiH~r~A---------~-~d~l~iL~~~~~~~~~gVi-H~-FsGs~e~a~~~l~--lG~yis~ 220 (325)
T 3ipw_A 155 GYRTLSILHQKYPYLPFFFHCRKS---------W-SDLCQLNKELGYNGCKGVV-HC-FDGTEEEMNQILN--EGWDIGV 220 (325)
T ss_dssp HHHHTHHHHHHCTTCCEEEEEESC---------H-HHHHHHHHHTTCTTSCEEE-CS-CCCCHHHHHHHHH--TTCEEEE
T ss_pred HHHHHHHHHHHhhCCeEEEEeCch---------H-HHHHHHHHhcCCCCCcEEE-EE-CCCCHHHHHHHHh--cCcEEee
Confidence 35555789999 999999999532 1 1233466621222345555 98 21 1223333332 2689999
Q ss_pred cccCCCCcHHHHHHHHHHHHHHCCCCcEEEecCCCCCc-ccc----------hh-------------h----HHHHHHHH
Q 003194 293 GLAIPKLSVQGMISSIKELLELAPTKKVMFSTDAYASP-ETY----------FL-------------G----AKRAREVV 344 (840)
Q Consensus 293 s~~~~~~~~~g~~~~l~~~le~~~~~kilfgSD~~~~P-e~~----------~~-------------~----~~~~R~~l 344 (840)
++..- + . ...+ +++...|.+|||.-||+++.+ ... .+ + ..+...++
T Consensus 221 ~G~~~---k-~-~~~~-~~v~~iPldrlLlETDaP~l~~~~~~~~~~~~~~p~p~r~~~k~~~~~~~g~rNeP~~v~~v~ 294 (325)
T 3ipw_A 221 TGNSL---Q-S-IELL-NVMKQIPIERLHIETDCPYCGIKKTSAGFKYLKEKDFGVKVEKYQRNKYVQRRNEPSNIIDIA 294 (325)
T ss_dssp CSGGG---S-S-HHHH-HHHTTSCGGGEEECCCTTSCCCCTTSGGGGGCSSCCCCBCGGGCCTTSCBTTCCCGGGHHHHH
T ss_pred Ccccc---C-c-HHHH-HHHHhCCcccEEEeCCCccccccccccchhcccccCccccccccccccccCCcCcHHHHHHHH
Confidence 88531 1 1 1223 688899999999999987541 000 00 0 01122222
Q ss_pred HHHHhhhhcCCCCChhHHHHHHHHHHHHhHHHHhcCC
Q 003194 345 FSVLRDTCIDEDLSVGEAIEVAKDIFALNAAQFYKIN 381 (840)
Q Consensus 345 ~~~l~~~v~~g~l~~~ea~~~~~~Il~~NA~rly~l~ 381 (840)
+.+.+. ..++. +.+..+.+.|+.|+|++.
T Consensus 295 -~~iA~l---~g~~~----eeva~~t~~Na~~lF~~~ 323 (325)
T 3ipw_A 295 -IIMSSI---KHISL----FEFVNKVYSNSMNMYFPT 323 (325)
T ss_dssp -HHHHHH---HTCCH----HHHHHHHHHHHHHHHSCC
T ss_pred -HHHHHh---hCcCH----HHHHHHHHHHHHHHhCcC
Confidence 223222 24565 578889999999999874
No 52
>2gwd_A Glutamate cysteine ligase; disulfide bridges, glutathione biosynthesis, beta-hairpin, R regulation; HET: GLU; 2.09A {Brassica juncea} PDB: 2gwc_A*
Probab=96.74 E-value=0.0031 Score=71.56 Aligned_cols=136 Identities=18% Similarity=0.225 Sum_probs=87.4
Q ss_pred ceeeeeeeeEEEEEeecccCCCCCcccCCCCCcccCCccccchHHHHHHHHHHHhCCC-------ce-------eeeccC
Q 003194 523 LVLNAGFEIEFYLLKSVLREGKEEWVPIDFTPYCSTAAYDAVSPVFQEVLADLHSLNI-------SV-------EQLHAE 588 (840)
Q Consensus 523 ~~~~~g~E~EF~l~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~l~~~Gi-------~v-------e~~h~E 588 (840)
=...+|+|+||++++.. ++. |. ++....++++.+.+.+ |. ++ ..+..|
T Consensus 33 ~~~~iGvE~E~~lVd~~--~~~----~~---------~~~~~~~lL~~l~~~~---g~~~~~~~~~~~~l~~~~~~i~~E 94 (449)
T 2gwd_A 33 EKWRIGTEHEKFGFEVN--TLR----PM---------KYDQIAELLNSIAERF---EWEKVMEGDKIIGLKQGKQSISLE 94 (449)
T ss_dssp GGCCEEEEEEEEEEETT--TCC----BC---------CHHHHHHHHHHHHHHH---TCEEEEETTEEEEEEETTEEEEEC
T ss_pred CCCeEEEEeEEEeeecC--CCC----CC---------ChHHHHHHHHHHHHhh---ccCccccccccccccCCCceEEec
Confidence 35899999999999872 111 11 1111234444443322 32 11 126667
Q ss_pred CCCCceEEecCcc-hHHHHHhHHHHHHHHHHHHHHHcCCee---Eecc-----------ccc----------CCCC----
Q 003194 589 AGKGQFEIALGHT-VAAKAADNLIFTREVLRAVARKHGLLA---TFVP-----------KFA----------LDDI---- 639 (840)
Q Consensus 589 ~gpGQ~Ei~l~~~-~~l~aaD~~~~~r~~ik~vA~~~Gl~A---TFmp-----------KP~----------~~~~---- 639 (840)
-+ +|+|++..|+ +.-++.+.+...+..++++|+++|+.. .+.| ||- .+..
T Consensus 95 ~~-~qiEl~t~p~~~~~e~~~~l~~~~~~~~~~a~~~g~~l~~~G~~P~~~~~~~~~~~~~RY~~m~~~~~~~g~~g~~m 173 (449)
T 2gwd_A 95 PG-GQFELSGAPLETLHQTCAEVNSHLYQVKAVAEEMGIGFLGMGFQPKWRREDIPTMPKGRYDIMRNYMPKVGSLGLDM 173 (449)
T ss_dssp TT-CCEEEECCCBSSHHHHHHHHHHHHHHHHHHHHHHTEEEECCSBCSSCCGGGSCCCSCHHHHHHHHHGGGTCSSHHHH
T ss_pred CC-ceEEecCCCcCCHHHHHHHHHHHHHHHHHHHHHcCCceeeccCCCCCCccccCCCCchHHHHHHHHHHHhchhHHHH
Confidence 76 9999999998 466789999999999999999999764 2333 331 0222
Q ss_pred ---CcccccccccccCCCcccccCCCCCcCCCcHHHHHHHHHHHHhHHhhhhhcCCCC
Q 003194 640 ---GSGSHVHLSLWQNGENVFMASDSSSKHGMSSVGEKFMAGVLHHLSSILAFTAPVP 694 (840)
Q Consensus 640 ---GsG~H~H~Sl~~~g~n~f~~~d~~~~~~lS~~~~~fiaGlL~h~~al~a~~~Pt~ 694 (840)
-+|+|||+++-+. +..-..+-.++...|-++|+++.++
T Consensus 174 m~~~~g~qVhl~~~~~-----------------~~~~~~~~~~~~~~P~llALsAnSP 214 (449)
T 2gwd_A 174 MLRTCTVQVNLDFSSE-----------------ADMIRKFRAGLALQPIATALFANSP 214 (449)
T ss_dssp HHHBCEEEEEECCSSH-----------------HHHHHHHHHHHHHHHHHHHHHCCBC
T ss_pred hhcceeeEEEecCCCH-----------------HHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 4788999998421 1234555667788888888877653
No 53
>2i5g_A Amidohydrolase; NYSGXRC, NYSGXRC-9311A, PSI2, structural genomics, protein structure initiative; 2.60A {Pseudomonas aeruginosa}
Probab=96.03 E-value=0.023 Score=61.46 Aligned_cols=67 Identities=7% Similarity=0.119 Sum_probs=44.6
Q ss_pred HHHHHHHHHHHHHHCCCCcEEEecCCCCCcc---------------------------cc--hhhHHHHHHHHHHHHhhh
Q 003194 301 VQGMISSIKELLELAPTKKVMFSTDAYASPE---------------------------TY--FLGAKRAREVVFSVLRDT 351 (840)
Q Consensus 301 ~~g~~~~l~~~le~~~~~kilfgSD~~~~Pe---------------------------~~--~~~~~~~R~~l~~~l~~~ 351 (840)
.+.+.+.+..+++.+|.++|.+||| ||. .. +.....+.. ++.++
T Consensus 225 ~~~~~~hi~~i~~~~G~dhVgiGsD---f~~~~~~~~~~~~~~~dg~~~~~~~~G~~~~~~gl~~~~~~~~----l~~~L 297 (325)
T 2i5g_A 225 IDDYAEAIEYVMNIVGEDAIGIGTD---FTQGHGHDFFEWLTHDKGYARRLTNFGKIVNPLGIRTVGEFPN----LTETL 297 (325)
T ss_dssp HHHHHHHHHHHHHHHCTTSEEECCC---BCTTCCHHHHHHHHBGGGTSSBCCCCCSCCCCBTCSSGGGTHH----HHHHH
T ss_pred HHHHHHHHHHHHHhcCCceEEECCc---CcccccccchhhhcccccccccccccCCCCCcccCCCHHHHHH----HHHHH
Confidence 4567778889999999999999999 430 00 011222222 23333
Q ss_pred hcCCCCChhHHHHHHHHHHHHhHHHHhc
Q 003194 352 CIDEDLSVGEAIEVAKDIFALNAAQFYK 379 (840)
Q Consensus 352 v~~g~l~~~ea~~~~~~Il~~NA~rly~ 379 (840)
.+.| ++. +.+++|+++|+.|+|+
T Consensus 298 ~~~G-~se----~~i~ki~g~N~lRvl~ 320 (325)
T 2i5g_A 298 LKRG-MPE----RVVRKVMGENWVRVLR 320 (325)
T ss_dssp HHTT-CCH----HHHHHHHTHHHHHHHH
T ss_pred HHcC-CCH----HHHHHHHHHHHHHHHH
Confidence 3333 564 6899999999999986
No 54
>2z26_A Dihydroorotase, dhoase; TIM barrel, hydrolase; HET: KCX DOR NCD; 1.29A {Escherichia coli} PDB: 2z24_A* 2z25_A* 2eg6_A* 1xge_A* 2eg7_A* 2eg8_A* 2z27_A* 2e25_A* 2z28_A* 2z29_A* 3mjm_A* 2z2a_A* 1j79_A* 2z2b_A* 3ihn_A* 3jze_A*
Probab=95.95 E-value=0.0047 Score=67.52 Aligned_cols=78 Identities=13% Similarity=0.147 Sum_probs=47.9
Q ss_pred hHHHHHHHHHHhhCCCcEEEeeCCCCCCCCcCCcChh----hhHHHHhhcCCCCcEEEEeCCCCchHHHHHHHHHhCCEe
Q 003194 213 DYIFISSLEVAQFLDLPLQIHTGFGDKDLDLRLSNPL----HLRAILEDKRFSKCRFVLLHASYPFSKEASYLAYVYPQV 288 (840)
Q Consensus 213 d~~l~~l~e~~~e~glPvq~H~G~gd~~~~~~~~~P~----~L~~l~~~~~~P~l~~VllH~g~p~~~e~~~la~~~pNV 288 (840)
+..+.++++.+++.|.|+.+|.+..+..++...+... .+..++. +++++++++.|.+.....+...-++ .||
T Consensus 119 ~~~l~~~~~~~~~~~~~v~vH~ed~~~~~~~~~~E~~~~~~~i~~~la--~~~~~~~hi~Hvst~~~~~~i~~ak--~~V 194 (347)
T 2z26_A 119 VDAIMPVLERMEKIGMPLLVHGEVTHADIDIFDREARFIESVMEPLRQ--RLTALKVVFEHITTKDAADYVRDGN--ERL 194 (347)
T ss_dssp GGGGHHHHHHHHHHTCCEEECCCCCCTTSCGGGHHHHHHHHTHHHHHH--HSTTCCEEECSCCSHHHHHHHHTSC--TTE
T ss_pred HHHHHHHHHHHHHhCCEEEEEecCCccccCHHHHHHHHHHHHHHHHHH--hhcCCcEEEEECCcHHHHHHHHHhC--CCc
Confidence 3346778899999999999999854311111100111 1222345 5899999999987543333333332 589
Q ss_pred Eecccc
Q 003194 289 YLDFGL 294 (840)
Q Consensus 289 yld~s~ 294 (840)
+++++.
T Consensus 195 t~e~~p 200 (347)
T 2z26_A 195 AATITP 200 (347)
T ss_dssp EEEECH
T ss_pred eEeecc
Confidence 998764
No 55
>3e2v_A 3'-5'-exonuclease; structural genomics, hydrolase, PSI-2, protein initiative, NEW YORK SGX research center for structural GEN nysgxrc; 1.50A {Saccharomyces cerevisiae}
Probab=95.29 E-value=0.22 Score=55.15 Aligned_cols=99 Identities=15% Similarity=0.261 Sum_probs=57.7
Q ss_pred HHHHHHHHHhhC----CCcEEEeeCCCCCCCCcCCcChh-hhHHHHhh---------------------cCCC-CcEEEE
Q 003194 215 IFISSLEVAQFL----DLPLQIHTGFGDKDLDLRLSNPL-HLRAILED---------------------KRFS-KCRFVL 267 (840)
Q Consensus 215 ~l~~l~e~~~e~----glPvq~H~G~gd~~~~~~~~~P~-~L~~l~~~---------------------~~~P-~l~~Vl 267 (840)
.|..-+++|.++ ++||.+|+--.. ..-+ .|...... .+|| ..+ ++
T Consensus 180 ~F~~QL~LA~e~~~~~~lPv~IH~R~A~-------~d~l~iL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~V 251 (401)
T 3e2v_A 180 FFEEQLKISCLNDKLSSYPLFLHMRSAC-------DDFVQILERFVVGFTDEKDTFQLQKLGASSSSGFYKFHPDRK-LV 251 (401)
T ss_dssp HHHHHHHHTTSSHHHHTSCEEEEEESCH-------HHHHHHHHHHHHCEECSSCTTCGGGC--CCTTCEECCCTTCC-EE
T ss_pred HHHHHHHHHHhhhccCCCeEEEEecchH-------HHHHHHHHHhhccccccccccccccccccccccccccCCCCc-EE
Confidence 455557889999 999999984210 0000 22222110 0122 234 45
Q ss_pred eCCCCc-hHHHHHHHHHhCCEeEecccccCCCCcHHHHHHHHHHHHHHCCCCcEEEecCCCC
Q 003194 268 LHASYP-FSKEASYLAYVYPQVYLDFGLAIPKLSVQGMISSIKELLELAPTKKVMFSTDAYA 328 (840)
Q Consensus 268 lH~g~p-~~~e~~~la~~~pNVyld~s~~~~~~~~~g~~~~l~~~le~~~~~kilfgSD~~~ 328 (840)
+|+ |. -..++-.+...-+|+|+++++.. . + . . ...+++...|.+|||.-||+++
T Consensus 252 ~H~-FsGs~e~a~~~l~lG~~~yis~~g~~-~--k-~-~-~~~e~v~~iPldrLLlETDaP~ 306 (401)
T 3e2v_A 252 VHS-FTGSAIDLQKLLNLSPNIFIGVNGCS-L--R-T-E-ENLAVVKQIPTERLLLETDAPW 306 (401)
T ss_dssp ECS-CCCCHHHHHHHHHHCTTEEEEECGGG-G--S-S-H-HHHHHHHTSCGGGEEECCCTTS
T ss_pred EEc-CCCCHHHHHHHHhCCCCEEEEeCCEe-c--C-C-H-HHHHHHHhCCchhEEEecCCCC
Confidence 698 21 12334444444478999999863 1 1 1 1 2237888999999999999874
No 56
>3ly0_A Dipeptidase AC. metallo peptidase. merops family M19; structural genomics, nysgrc, target 9523C, phosphinate inhibitor, PSI-2; HET: LY0; 1.40A {Rhodobacter sphaeroides} PDB: 3fdg_A
Probab=91.81 E-value=0.8 Score=49.90 Aligned_cols=70 Identities=7% Similarity=0.058 Sum_probs=46.1
Q ss_pred HHHHHHHHHHHHHHCCCCcEEEecCCC--CCcccchhhHHHHHHHHHHHHhhhhcCCCCChhHHHHHHHHHHHHhHHHHh
Q 003194 301 VQGMISSIKELLELAPTKKVMFSTDAY--ASPETYFLGAKRAREVVFSVLRDTCIDEDLSVGEAIEVAKDIFALNAAQFY 378 (840)
Q Consensus 301 ~~g~~~~l~~~le~~~~~kilfgSD~~--~~Pe~~~~~~~~~R~~l~~~l~~~v~~g~l~~~ea~~~~~~Il~~NA~rly 378 (840)
.+.+.+.+..+.+++|.+.|-+|||-- ..|.. +.....+.. ++.++.+.| ++. +.+++|+++|..|+|
T Consensus 282 l~~~~~Hi~hi~~l~G~dhVgiGsDfdG~~~p~g-l~d~s~~p~----L~~~L~~rG-~se----~~i~ki~g~N~lRvl 351 (364)
T 3ly0_A 282 WEPVLRHLDHLIDRLGEDHVGMGSDFDGATIPQG-IADVTGLPA----LQAAMRAHG-YDE----PLMRKLCHENWYGLL 351 (364)
T ss_dssp SHHHHHHHHHHHHHHCTTSEEECCCBTTSCCCTT-TCSGGGHHH----HHHHHHHHT-CCH----HHHHHHHTHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCeEEECCCCCCCCCCCC-CCCHHHHHH----HHHHHHHCC-CCH----HHHHHHHhHhHHHHH
Confidence 456778999999999999999999921 12321 111222222 223333333 664 689999999999999
Q ss_pred cC
Q 003194 379 KI 380 (840)
Q Consensus 379 ~l 380 (840)
+-
T Consensus 352 ~~ 353 (364)
T 3ly0_A 352 ER 353 (364)
T ss_dssp HH
T ss_pred HH
Confidence 74
No 57
>1itu_A Renal dipeptidase; glycoprotein, membrane-bound, zinc protease BET lactamase, cilastatin, complex (hydrolase-inhibitor), hydro; HET: NAG CIL; 2.00A {Homo sapiens} SCOP: c.1.9.7 PDB: 1itq_A*
Probab=91.47 E-value=0.68 Score=50.64 Aligned_cols=70 Identities=14% Similarity=0.209 Sum_probs=46.1
Q ss_pred HHHHHHHHHHHHHHCCCCcEEEecCCCC---CcccchhhHHHHHHHHHHHHhhhhcCCCCChhHHHHHHHHHHHHhHHHH
Q 003194 301 VQGMISSIKELLELAPTKKVMFSTDAYA---SPETYFLGAKRAREVVFSVLRDTCIDEDLSVGEAIEVAKDIFALNAAQF 377 (840)
Q Consensus 301 ~~g~~~~l~~~le~~~~~kilfgSD~~~---~Pe~~~~~~~~~R~~l~~~l~~~v~~g~l~~~ea~~~~~~Il~~NA~rl 377 (840)
.+.+.+.+..+.+.+|.+.|.+|||--. .|.. +.....+... +.++.+.| ++. +.+++|+++|..|+
T Consensus 264 ~~~~~~hi~hi~~~~G~dhVgiGsDfdG~~~~p~g-l~d~~~~p~l----~~~L~~~G-~se----~~i~ki~g~N~lRv 333 (369)
T 1itu_A 264 LSQVADHLDHIKEVAGARAVGFGGDFDGVPRVPEG-LEDVSKYPDL----IAELLRRN-WTE----AEVKGALADNLLRV 333 (369)
T ss_dssp HHHHHHHHHHHHHHHCGGGEEECCCTTSCSCCCBT-CSSTTCHHHH----HHHHHHTT-CCH----HHHHHHHTHHHHHH
T ss_pred HHHHHHHHHHHHHhhCCCeEEECCCCCCCCCCCCC-CCCHHHHHHH----HHHHHHcC-CCH----HHHHHHHhHhHHHH
Confidence 4566778889999999999999999322 2321 1112223322 23333333 564 68999999999999
Q ss_pred hcC
Q 003194 378 YKI 380 (840)
Q Consensus 378 y~l 380 (840)
++-
T Consensus 334 l~~ 336 (369)
T 1itu_A 334 FEA 336 (369)
T ss_dssp HHH
T ss_pred HHH
Confidence 974
No 58
>3b40_A PVDM, probable dipeptidase; structural genomics, hydrolase, PSI-2, protein structure initiative; 2.00A {Pseudomonas aeruginosa}
Probab=91.39 E-value=0.77 Score=51.09 Aligned_cols=70 Identities=11% Similarity=0.102 Sum_probs=46.0
Q ss_pred HHHHHHHHHHHHHHCCCCcEEEecCCCC--CcccchhhHHHHHHHHHHHHhhhhcCCCCChhHHHHHHHHHHHHhHHHHh
Q 003194 301 VQGMISSIKELLELAPTKKVMFSTDAYA--SPETYFLGAKRAREVVFSVLRDTCIDEDLSVGEAIEVAKDIFALNAAQFY 378 (840)
Q Consensus 301 ~~g~~~~l~~~le~~~~~kilfgSD~~~--~Pe~~~~~~~~~R~~l~~~l~~~v~~g~l~~~ea~~~~~~Il~~NA~rly 378 (840)
.+.+.+.+..+.+++|.+.|-+|||--. .|.. +.....+... +.++++.| +|. +.+++|+++|..|++
T Consensus 335 l~~~~~Hidhi~~~~G~dhVGiGsDfDG~~~~~g-l~dvs~~p~l----~~~L~~rG-~se----~di~ki~ggN~lRVl 404 (417)
T 3b40_A 335 LKELVDAIDYTVKKVGIDHVGISSDFNDGGGVDG-WKDVSEIRNV----TAELITRG-YSD----ADIAKLWGGNFLRAW 404 (417)
T ss_dssp HHHHHHHHHHHHHHHCGGGEEEECCBTTTCCBBT-BCSGGGHHHH----HHHHHHHT-CCH----HHHHHHTTHHHHHHH
T ss_pred HHHHHHHHHHHHHhhCCCeEEEcCCCCCCCCCCC-CCCHHHHHHH----HHHHHhcC-CCH----HHHHHHHHHHHHHHH
Confidence 4456778889999999999999999221 1221 1222223333 33333334 564 689999999999998
Q ss_pred cC
Q 003194 379 KI 380 (840)
Q Consensus 379 ~l 380 (840)
+-
T Consensus 405 ~~ 406 (417)
T 3b40_A 405 GE 406 (417)
T ss_dssp HH
T ss_pred HH
Confidence 63
No 59
>3id7_A Dipeptidase; streptomyces coelicolor A3(2), hydrolase; 1.30A {Streptomyces coelicolor} PDB: 3isi_X* 3itc_A* 3k5x_A* 3s2j_A* 3s2l_A* 3s2m_A* 3s2n_A*
Probab=91.11 E-value=0.65 Score=51.32 Aligned_cols=71 Identities=11% Similarity=0.080 Sum_probs=47.1
Q ss_pred cHHHHHHHHHHHHHHCCCCcEEEecCCCC---CcccchhhHHHHHHHHHHHHhhhhcCCCCChhHHHHHHHHHHHHhHHH
Q 003194 300 SVQGMISSIKELLELAPTKKVMFSTDAYA---SPETYFLGAKRAREVVFSVLRDTCIDEDLSVGEAIEVAKDIFALNAAQ 376 (840)
Q Consensus 300 ~~~g~~~~l~~~le~~~~~kilfgSD~~~---~Pe~~~~~~~~~R~~l~~~l~~~v~~g~l~~~ea~~~~~~Il~~NA~r 376 (840)
+.+.+.+.+..+.+++|.+.|-+|||--. .|+.. .....+.. ++.++.+.| ++. +.+++|+++|..|
T Consensus 295 tl~dv~~HIdhi~~l~G~dhVgiGsDfDG~~~~P~gl-~dvs~~p~----L~~~L~~rG-~se----~di~ki~g~N~lR 364 (400)
T 3id7_A 295 TVSTVADHLDHMREVAGVDHLGIGGDYDGTPFTPDGL-GDVSGYPN----LIAELLDRG-WSQ----SDLAKLTWKNAVR 364 (400)
T ss_dssp BHHHHHHHHHHHHHHHCGGGEEECCCBTTCSCCCBTC-SSTTCHHH----HHHHHHHTT-CCH----HHHHHHHTHHHHH
T ss_pred CHHHHHHHHHHHHHhcCCceEEECCCCCCCCCCCCCC-CCHHHHHH----HHHHHhhcC-CCH----HHHHHHHHHhHHH
Confidence 34567789999999999999999999322 23211 11112222 233344444 664 6899999999999
Q ss_pred HhcC
Q 003194 377 FYKI 380 (840)
Q Consensus 377 ly~l 380 (840)
+++-
T Consensus 365 vl~~ 368 (400)
T 3id7_A 365 VLDA 368 (400)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9974
No 60
>3neh_A Renal dipeptidase family protein; structural genomics, nysgrc, dipeptide L-Leu-D-Ala, PSI-2, P structure initiative; HET: L3A; 1.64A {Listeria monocytogenes} PDB: 3lu2_A
Probab=91.02 E-value=1.3 Score=47.41 Aligned_cols=70 Identities=16% Similarity=0.111 Sum_probs=47.4
Q ss_pred cHHHHHHHHHHHHHHCCCCcEEEecCCCC---CcccchhhHHHHHHHHHHHHhhhhcCCCCChhHHHHHHHHHHHHhHHH
Q 003194 300 SVQGMISSIKELLELAPTKKVMFSTDAYA---SPETYFLGAKRAREVVFSVLRDTCIDEDLSVGEAIEVAKDIFALNAAQ 376 (840)
Q Consensus 300 ~~~g~~~~l~~~le~~~~~kilfgSD~~~---~Pe~~~~~~~~~R~~l~~~l~~~v~~g~l~~~ea~~~~~~Il~~NA~r 376 (840)
+.+.+.+.+..+.+++|.+.|-+|||--. .|.. +.....+ -++..++.+ | ++. +.+++|+++|+.|
T Consensus 238 tl~~~~~Hi~hi~~l~G~dhVgiGsDfDG~~~~p~g-l~d~s~~----p~L~~~L~~-g-~se----~~i~ki~g~N~lR 306 (318)
T 3neh_A 238 DTEDVIRHIDHICELGGLKNIGFGSDFDGIPDHVKG-LEHVGKY----QSFLETLEK-H-YTK----EEIEGFASRNFLN 306 (318)
T ss_dssp BHHHHHHHHHHHHHTTCGGGEEECCCBTSCSSCBBT-BSSGGGH----HHHHHHHTT-T-SCH----HHHHHHHTHHHHH
T ss_pred CHHHHHHHHHHHHHhcCCCeEEECCCCCCCCCCCCC-CCCHHHH----HHHHHHHHh-c-CCH----HHHHHHHhHhHHH
Confidence 34567789999999999999999999322 2221 1112222 233444555 4 775 6899999999999
Q ss_pred HhcC
Q 003194 377 FYKI 380 (840)
Q Consensus 377 ly~l 380 (840)
+|+-
T Consensus 307 v~~~ 310 (318)
T 3neh_A 307 HLPK 310 (318)
T ss_dssp TCCC
T ss_pred HHhh
Confidence 9864
No 61
>3ln6_A Glutathione biosynthesis bifunctional protein GSH; gamma-glutamyl cysteine ligase domain, ATP-grAsp domain, HYB enzyme; 2.95A {Streptococcus agalactiae serogroup V}
Probab=90.92 E-value=0.89 Score=54.55 Aligned_cols=117 Identities=16% Similarity=0.072 Sum_probs=71.2
Q ss_pred eeccCCCCCceEEecCcc-hHHHHHhHHHHHHHHHHHHH-HHcCCeeEecc-c------ccCC-----------------
Q 003194 584 QLHAEAGKGQFEIALGHT-VAAKAADNLIFTREVLRAVA-RKHGLLATFVP-K------FALD----------------- 637 (840)
Q Consensus 584 ~~h~E~gpGQ~Ei~l~~~-~~l~aaD~~~~~r~~ik~vA-~~~Gl~ATFmp-K------P~~~----------------- 637 (840)
.+.+|..-.|.|+..+++ +.-++.+.+...+.++.+.+ ....+-+.=|| . |+..
T Consensus 54 ~i~~d~~es~lE~~Tpv~~~~~~~~~~L~~l~~~~~~~~~~~e~lw~~smp~~l~~~~i~ia~~~~~~~~~Yr~~l~~ry 133 (750)
T 3ln6_A 54 YIQTDYSEPQLELITPIAKDSQEAIRFLKAISDVAGRSINHDEYLWPLSMPPKVREEDIQIAQLEDAFEYDYRKYLEKTY 133 (750)
T ss_dssp SEEESSBSSEEEEECCCBSSHHHHHHHHHHHHHHHHHHSCTTEEECCSSSCSSCCTTTCCBCCCSCHHHHHHHHHHHHHH
T ss_pred CccchhhhhheeeeCcCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeecCCCCCCCCCCCcccCCCCCcHHHHHHHHHHh
Confidence 677899999999999998 57778889988888888875 33333222222 1 2221
Q ss_pred ----CCCcccccccccccCCCcc-cccCCCCC-cCCCcHHHHHHHHHHHHhHHhhhhhcCCCCCccccC
Q 003194 638 ----DIGSGSHVHLSLWQNGENV-FMASDSSS-KHGMSSVGEKFMAGVLHHLSSILAFTAPVPNSYDRI 700 (840)
Q Consensus 638 ----~~GsG~H~H~Sl~~~g~n~-f~~~d~~~-~~~lS~~~~~fiaGlL~h~~al~a~~~Pt~nSY~Rl 700 (840)
..=+|+|+|+|+-+..-.+ +...+..+ ..-.|...-..+-+++.+.+-++++++.++-.-+++
T Consensus 134 g~~~q~i~G~Hvn~~~~~~~~~~l~~~~~~~~~~~~~~~~y~~l~r~~~r~~w~l~~L~gaSP~~~~~f 202 (750)
T 3ln6_A 134 GKLIQSISGIHYNLGLGQELLTSLFELSQADNAIDFQNQLYMKLSQNFLRYRWLLTYLYGASPVAEEDF 202 (750)
T ss_dssp CTGGGGCCCEEEEEEECHHHHHHHHHHHCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHTCCBCCCSSSC
T ss_pred ChhhceeeeEEEEecCChHHHHHHhhccccchHHHHhhhHHHHHHHHHHhHHHHHHHHhhCCccccccc
Confidence 1236899999995421111 10000000 001123333457788999999999998876543333
No 62
>1va6_A Glutamate--cysteine ligase; glutathione homeostasis, beta barrel, peptide synthesis, transition state analogue; HET: P2S ADP P6G; 2.10A {Escherichia coli} SCOP: d.128.1.4 PDB: 1v4g_A* 2d32_A* 2d33_A*
Probab=90.70 E-value=0.28 Score=55.91 Aligned_cols=109 Identities=10% Similarity=-0.076 Sum_probs=65.0
Q ss_pred eeccCCCCCceEEecCcc-hHHHHHhHHHHHHHHHHHHHHHcCCee--Eecc----c----ccCCC--------------
Q 003194 584 QLHAEAGKGQFEIALGHT-VAAKAADNLIFTREVLRAVARKHGLLA--TFVP----K----FALDD-------------- 638 (840)
Q Consensus 584 ~~h~E~gpGQ~Ei~l~~~-~~l~aaD~~~~~r~~ik~vA~~~Gl~A--TFmp----K----P~~~~-------------- 638 (840)
.+.+|..-.|.|+..+++ +.-++.+.+-..+..+.+.+. |... .=|| . |+...
T Consensus 56 ~IttDfsEsqlE~iTpv~~s~~eal~~L~~l~~~v~~~l~--~e~Lwp~SmP~~l~~~~~IpiA~yg~s~~g~~k~~Yr~ 133 (518)
T 1va6_A 56 WITTDFAEALLEFITPVDGDIEHMLTFMRDLHRYTARNMG--DERMWPLSMPSYIAEGQDIELAQYGTSNTGRFKTLYRE 133 (518)
T ss_dssp SEEECSBTTEEEEECCCBSCHHHHHHHHHHHHHHHHTSST--TCEECCSSSCSSCCTTCCCCBCCCCSSHHHHHHHHHHH
T ss_pred CcCCCcchhheeecCCCCCCHHHHHHHHHHHHHHHHHHcC--CCeEeecCCCCCCCCCCCCccccccccccCccchHHHH
Confidence 467899999999999997 666788888888888887773 4322 1111 1 22211
Q ss_pred -----------CCcccccccccccCC-CcccccCC-CCCcCCCcHHHHHHHHHHHHhHHhhhhhcCCCC
Q 003194 639 -----------IGSGSHVHLSLWQNG-ENVFMASD-SSSKHGMSSVGEKFMAGVLHHLSSILAFTAPVP 694 (840)
Q Consensus 639 -----------~GsG~H~H~Sl~~~g-~n~f~~~d-~~~~~~lS~~~~~fiaGlL~h~~al~a~~~Pt~ 694 (840)
.=+|+|+|+|+-+.= +.++...+ .+...-.|...-..+-+++.+.+-|+++++.++
T Consensus 134 ~L~~rYG~~~q~IsGiH~N~s~~d~l~~~l~~~~~~~~~~~~~~~~y~~lirn~~r~~wlL~yLfgASP 202 (518)
T 1va6_A 134 GLKNRYGALMQTISGVHYNFSLPMAFWQAKSGDISGADAKEKISAGYFRVIRNYYRFGWVIPYLFGASP 202 (518)
T ss_dssp HHHHHHCHHHHTCCEEEEEEECCHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHCCBS
T ss_pred HHHHHhCcchheeeeEEEEEecCHHHHHHHHhhccchhHHHHhhHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 137999999994320 00000000 000000122333445588999999999998887
No 63
>2rag_A Dipeptidase; aminohydrolase, structural genomics, NYSGXRC, target 9257A, protein structure initiative; 2.00A {Caulobacter crescentus}
Probab=89.58 E-value=1.5 Score=48.70 Aligned_cols=69 Identities=14% Similarity=0.106 Sum_probs=45.5
Q ss_pred HHHHHHHHHHHHHHCCCCcEEEecCCCC--CcccchhhHHHHHHHHHHHHhhhhcCCCCChhHHHHHHHHHHHHhHHHHh
Q 003194 301 VQGMISSIKELLELAPTKKVMFSTDAYA--SPETYFLGAKRAREVVFSVLRDTCIDEDLSVGEAIEVAKDIFALNAAQFY 378 (840)
Q Consensus 301 ~~g~~~~l~~~le~~~~~kilfgSD~~~--~Pe~~~~~~~~~R~~l~~~l~~~v~~g~l~~~ea~~~~~~Il~~NA~rly 378 (840)
.+.+.+.+..+.+.+|.+.|-+|||--. .|.. +.....+.. ++.++++.| ++. +.+++|+++|..|++
T Consensus 336 l~~~~~Hidhi~~~~G~dhVgiGsDfDG~~~~~g-l~dvs~~p~----L~~~Ll~rG-~se----~di~ki~g~N~lRvl 405 (417)
T 2rag_A 336 FDLYMKSMLHVLKVAGPKGVCVGADWDGGGGMDG-FEDITDLPK----ITARLKAEG-YSD----ADIEAIWSGNVLRIV 405 (417)
T ss_dssp HHHHHHHHHHHHHHHCTTSEEECCCTTTTCCBBT-BSSGGGTHH----HHHHHHHTT-CCH----HHHHHHHTHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCceEEEccCCCCCCCCCC-CCCHHHHHH----HHHHHHHcC-CCH----HHHHHHHHHHHHHHH
Confidence 4556778889999999999999999322 1211 112222222 233444444 564 689999999999998
Q ss_pred c
Q 003194 379 K 379 (840)
Q Consensus 379 ~ 379 (840)
+
T Consensus 406 ~ 406 (417)
T 2rag_A 406 D 406 (417)
T ss_dssp H
T ss_pred H
Confidence 6
No 64
>3pnu_A Dihydroorotase; TIM barrel, zinc binding, hydrolase, structu genomics, center for structural genomics of infectious DISE csgid; HET: KCX; 2.40A {Campylobacter jejuni subsp}
Probab=87.48 E-value=2.9 Score=45.59 Aligned_cols=75 Identities=17% Similarity=0.148 Sum_probs=49.4
Q ss_pred hhHHHHHHHHHHhhCCCcEEEeeCCCCCCCCcCCcChhhh---HHHHhhcCCCCcEEEEeCCCCchHHHHHHHHHhCCEe
Q 003194 212 IDYIFISSLEVAQFLDLPLQIHTGFGDKDLDLRLSNPLHL---RAILEDKRFSKCRFVLLHASYPFSKEASYLAYVYPQV 288 (840)
Q Consensus 212 ~d~~l~~l~e~~~e~glPvq~H~G~gd~~~~~~~~~P~~L---~~l~~~~~~P~l~~VllH~g~p~~~e~~~la~~~pNV 288 (840)
++..+..+++.++++|.|+.+|.--.+. ...+.-..+ ..+++ ++|+.++++.|.+..-..++..-| .+|
T Consensus 134 ~~~~l~~~l~~~~~~g~~v~vHaEd~~~---i~~~E~~ai~r~~~la~--~~~g~~lhi~HvSt~~~v~~I~~A---~~V 205 (359)
T 3pnu_A 134 DIEYLKPTLEAMSDLNIPLLVHGETNDF---VMDRESNFAKIYEKLAK--HFPRLKIVMEHITTKTLCELLKDY---ENL 205 (359)
T ss_dssp CHHHHHHHHHHHHHTTCCEEECCCCSSC---GGGTTGGGHHHHHHHHH--HCTTSCEEECSCCSHHHHHHHHHC---TTE
T ss_pred CHHHHHHHHHHHHHcCCEEEEecCCchH---hHHHHHHHHHHHHHHHH--HcCCCcEEEEecCcHHHHHHHHhc---CCc
Confidence 5667889999999999999999874421 111122223 34555 689999999999754333333323 678
Q ss_pred Eecccc
Q 003194 289 YLDFGL 294 (840)
Q Consensus 289 yld~s~ 294 (840)
+.+++.
T Consensus 206 taEv~p 211 (359)
T 3pnu_A 206 YATITL 211 (359)
T ss_dssp EEEECS
T ss_pred eEEEec
Confidence 777764
No 65
>2vun_A Enamidase; nicotinate degradation, binuclear metal center, amidohydrolases, stereospecificity, hydrolase; 1.89A {Eubacterium barkeri}
Probab=87.18 E-value=9.3 Score=41.09 Aligned_cols=143 Identities=17% Similarity=0.114 Sum_probs=76.6
Q ss_pred hhHHHHHHHHHHhhCCCcEEEeeCCCCCCCCcCCcChhhhHHHHhhcCCCCcEEEEeCCCC---chHHHH-HHHHHhCCE
Q 003194 212 IDYIFISSLEVAQFLDLPLQIHTGFGDKDLDLRLSNPLHLRAILEDKRFSKCRFVLLHASY---PFSKEA-SYLAYVYPQ 287 (840)
Q Consensus 212 ~d~~l~~l~e~~~e~glPvq~H~G~gd~~~~~~~~~P~~L~~l~~~~~~P~l~~VllH~g~---p~~~e~-~~la~~~pN 287 (840)
.+..+..+++.+.++|+|+.+|++-.. ........+....+.+ .+ .+.|+.. +...+. ..++.. +
T Consensus 172 ~~~~l~~~~~~a~~~g~~v~~H~~~~~----~~~~~~~~i~~~~~~G----~~-~i~H~~~~~~~~~~~~~~~~~~~--g 240 (386)
T 2vun_A 172 NPEDAAPMVEWAHKHGFKVQMHTGGTS----IPGSSTVTADDVIKTK----PD-VVSHINGGPTAISVQEVDRIMDE--T 240 (386)
T ss_dssp SHHHHHHHHHHHHHTTCEEEEECSCCS----CSTTCSCCHHHHHHHC----CS-EEETTTCSSSCCCHHHHHHHHHH--C
T ss_pred CHHHHHHHHHHHHHCCCeEEEecCCcc----ccccCHHHHHHHHHcC----CC-EEEEccCCCCCCCHHHHHHHHHc--C
Confidence 455778889999999999999997321 0001112244444522 22 3789754 122333 333322 3
Q ss_pred eEe-cccccCCCCcHHHHHHHHHHHHHHCCCCcEEEecCCC-CCcccchhhHHHHHHHHHHHHhhhhcCCCCChhHHHHH
Q 003194 288 VYL-DFGLAIPKLSVQGMISSIKELLELAPTKKVMFSTDAY-ASPETYFLGAKRAREVVFSVLRDTCIDEDLSVGEAIEV 365 (840)
Q Consensus 288 Vyl-d~s~~~~~~~~~g~~~~l~~~le~~~~~kilfgSD~~-~~Pe~~~~~~~~~R~~l~~~l~~~v~~g~l~~~ea~~~ 365 (840)
+++ .+.. .+. .......++++++.+..++++++||++ .++. +..+. ..+.+.. +++ ..++.. .
T Consensus 241 ~~vl~~~~-~g~--~~~~~~~~~~~~~~g~~d~v~lgTD~p~~~~~-~~~g~--~~~~~~~----~~~-~~ls~~----~ 305 (386)
T 2vun_A 241 DFAMEIVQ-CGN--PKIADYVARRAAEKGQLGRVIFGNDAPSGTGL-IPLGI--LRNMCQI----ASM-SDIDPE----V 305 (386)
T ss_dssp CCEEEEES-SSC--HHHHHHHHHHHHHHTCGGGEEEECCBSBTTBB-CTTHH--HHHHHHH----HHH-SCCCHH----H
T ss_pred CeEEEecc-CCc--ccccHHHHHHHHHcCCCceeEEecCCCCCCCC-Ccchh--HHHHHHH----Hhh-cCCCHH----H
Confidence 443 1100 000 111234678888888889999999963 2111 11111 1222221 122 457764 4
Q ss_pred HHHHHHHhHHHHhcC
Q 003194 366 AKDIFALNAAQFYKI 380 (840)
Q Consensus 366 ~~~Il~~NA~rly~l 380 (840)
+-+++..|++++|++
T Consensus 306 ~~~~~T~n~A~~lgl 320 (386)
T 2vun_A 306 AVCMATGNSTAVYGL 320 (386)
T ss_dssp HHHHHTHHHHHHHTC
T ss_pred HHHHHhHHHHHHcCC
Confidence 556677899999998
No 66
>3ln7_A Glutathione biosynthesis bifunctional protein GSH; gamma-glutamylcysteine ligase domain, ATP-grAsp domain, HYBR enzyme, ATP-binding; 3.20A {Pasteurella multocida}
Probab=84.88 E-value=4.1 Score=48.86 Aligned_cols=112 Identities=16% Similarity=0.132 Sum_probs=68.5
Q ss_pred eeccCCCCCceEEecCcc-hHHHHHhHHHHHHHHHHHHH-HHcCCeeEecc----c----ccCCC---------------
Q 003194 584 QLHAEAGKGQFEIALGHT-VAAKAADNLIFTREVLRAVA-RKHGLLATFVP----K----FALDD--------------- 638 (840)
Q Consensus 584 ~~h~E~gpGQ~Ei~l~~~-~~l~aaD~~~~~r~~ik~vA-~~~Gl~ATFmp----K----P~~~~--------------- 638 (840)
.+.+|..-.|.|+..+++ +.-++-+.+-..+.++.+.+ ....+-+.=|| . |+..+
T Consensus 53 ~i~td~ses~lE~iTpv~~~~~~~~~~L~~l~~~~~~~~~~~e~lwp~smp~~l~~~~~ip~a~~~~~~~~~Yr~~L~~r 132 (757)
T 3ln7_A 53 YIQTDFAESQLELITPPTKKLEDTFRWLSVIHEVVQRSLPEEEYIFPLSMPAGLPAEEQIRVAQLDNPEDVAYREYLVKI 132 (757)
T ss_dssp SEECSSSTTEEEEEEEEESSHHHHHHHHHHHHHHHHHHSCTTEECCCSSSCSBCCC---CCCCCCSSHHHHHHHHHHHHH
T ss_pred CCCchhhhhheeeeCcCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCcCCCCCCCCccccCCCccHHHHHHHHHH
Confidence 577899999999999997 57778888988888888875 44443332232 1 22210
Q ss_pred ------CCcccccccccccCC-CcccccC-CCCC-cCCCcHHHHHHHHHHHHhHHhhhhhcCCCCC
Q 003194 639 ------IGSGSHVHLSLWQNG-ENVFMAS-DSSS-KHGMSSVGEKFMAGVLHHLSSILAFTAPVPN 695 (840)
Q Consensus 639 ------~GsG~H~H~Sl~~~g-~n~f~~~-d~~~-~~~lS~~~~~fiaGlL~h~~al~a~~~Pt~n 695 (840)
.=+|+|+|+|+-+.- +.++... +..+ ..-.|...-..+-+++.+.+-++++++.++-
T Consensus 133 yG~~~q~i~GiH~n~s~~~~~~~~l~~~~~~~~~~~~~~~~~Y~~l~r~~~r~~wll~yL~gaSP~ 198 (757)
T 3ln7_A 133 YGKNKQMVSGIHYNFQLSPDLITRLFRLQNEYQSAVDFQNDLYLKMAKNFLRYQWILLYLLAATPT 198 (757)
T ss_dssp HCSHHHHCCCCEEEEEECHHHHHHHHHHCTTTCSHHHHHHHHHHHHHHHHHHHHHHHHHHTCCBCC
T ss_pred hchhhceeeeEEEEEecChHHHHHHhhhcccchhHHHHHhHHHHHHHHhhHhHHHHHHHHhhCCcc
Confidence 136899999995321 0111100 1000 0011223333577788899999999987764
No 67
>3gnh_A L-lysine, L-arginine carboxypeptidase CC2672; N-methyl phosphonate derivative of L- arginine, hydrolase; HET: KCX M3R; 1.70A {Caulobacter crescentus CB15} PDB: 3mtw_A*
Probab=82.38 E-value=27 Score=37.42 Aligned_cols=140 Identities=15% Similarity=0.067 Sum_probs=74.0
Q ss_pred hhhhHHHHHHHHHHhhCCCcEEEeeCCCCCCCCcCCcChhhhHHHHhhcCCCCcEEEEeCCCCchHHHHHHHHHhCCEeE
Q 003194 210 SLIDYIFISSLEVAQFLDLPLQIHTGFGDKDLDLRLSNPLHLRAILEDKRFSKCRFVLLHASYPFSKEASYLAYVYPQVY 289 (840)
Q Consensus 210 ~l~d~~l~~l~e~~~e~glPvq~H~G~gd~~~~~~~~~P~~L~~l~~~~~~P~l~~VllH~g~p~~~e~~~la~~~pNVy 289 (840)
.+.+..+..+.+.|.++|+++.+|... ...+...++. ..+ .+.|+.+-...++..++.. +++
T Consensus 203 ~~~~e~l~~~~~~A~~~g~~v~~H~~~-----------~~~i~~~~~~--g~~---~i~H~~~~~~~~~~~~~~~--g~~ 264 (403)
T 3gnh_A 203 QLTYEEMKAVVDEAHMAGIKVAAHAHG-----------ASGIREAVRA--GVD---TIEHASLVDDEGIKLAVQK--GAY 264 (403)
T ss_dssp CSCHHHHHHHHHHHHHTTCEEEEEECS-----------HHHHHHHHHT--TCS---EEEECTTCCHHHHHHHHHH--TCE
T ss_pred cCCHHHHHHHHHHHHHCCCEEEEEeCC-----------HHHHHHHHHh--CCC---EEecCCcCCHHHHHHHHHC--CCE
Confidence 344556788889999999999999842 1124455552 222 4568754333333444432 444
Q ss_pred ecccccCCC----------CcHH------H----HHHHHHHHHHHCCCCcEEEecCCCCCcccchhhHHHHHHHHHHHHh
Q 003194 290 LDFGLAIPK----------LSVQ------G----MISSIKELLELAPTKKVMFSTDAYASPETYFLGAKRAREVVFSVLR 349 (840)
Q Consensus 290 ld~s~~~~~----------~~~~------g----~~~~l~~~le~~~~~kilfgSD~~~~Pe~~~~~~~~~R~~l~~~l~ 349 (840)
+.+...... .... + ....++.+++.+. ++.+|||+...|.... .+.++.
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gv--~v~~gTD~~~~~~~~~--~~e~~~------- 333 (403)
T 3gnh_A 265 FSMDIYNTDYTQAEGKKNGVLEDNLRKDRDIGELQRENFRKALKAGV--KMVYGTDAGIYPHGDN--AKQFAV------- 333 (403)
T ss_dssp EECCCSTHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHHTC--EEECCCCBTTBCTTCG--GGHHHH-------
T ss_pred EEeeechhhhhhhhccccCCCHHHHHHHHHHHHHHHHHHHHHHHCCC--eEEEecCCCCCCCCch--HHHHHH-------
Confidence 444321100 0000 0 1123556666443 8999999765553221 111211
Q ss_pred hhhcCCCCChhHHHHHHHHHHHHhHHHHhcCCCCc
Q 003194 350 DTCIDEDLSVGEAIEVAKDIFALNAAQFYKINLGV 384 (840)
Q Consensus 350 ~~v~~g~l~~~ea~~~~~~Il~~NA~rly~l~~~~ 384 (840)
+++ ..++.. .+=+..-.|++++++++...
T Consensus 334 -~~~-~gl~~~----~al~~aT~~~A~~lg~~~~~ 362 (403)
T 3gnh_A 334 -MVR-YGATPL----QAIQSATLTAAEALGRSKDV 362 (403)
T ss_dssp -HHH-TTCCHH----HHHHHTTHHHHHHHTCTTTS
T ss_pred -HHH-cCCCHH----HHHHHHHHHHHHHhCCCCCc
Confidence 112 257764 34455668899999987543
No 68
>2z00_A Dihydroorotase; zinc binding protein, hydrolase, metal-binding, pyrimidine biosynthesis, structural genomics, NPPSFA; 2.42A {Thermus thermophilus}
Probab=82.19 E-value=4.4 Score=44.31 Aligned_cols=25 Identities=24% Similarity=0.276 Sum_probs=20.1
Q ss_pred hhHHHHHHHHHHhhCCCcEEEeeCC
Q 003194 212 IDYIFISSLEVAQFLDLPLQIHTGF 236 (840)
Q Consensus 212 ~d~~l~~l~e~~~e~glPvq~H~G~ 236 (840)
.+..+..+++.+.++|+|+.+|..-
T Consensus 153 ~~~~l~~~~~~a~~~g~~v~~H~~~ 177 (426)
T 2z00_A 153 DAGVLAAGLLMAAPLGLPVAVHAED 177 (426)
T ss_dssp CHHHHHHHHHHHGGGTCCEEECCCC
T ss_pred CHHHHHHHHHHHHhhCCEEEEeCCC
Confidence 3445677789999999999999853
No 69
>3hm7_A Allantoinase; metallo-dependent hydrolase, protein structure initiative, PSI-2, NEW YORK structural genomix research CON nysgxrc; 2.60A {Bacillus halodurans}
Probab=79.70 E-value=8.8 Score=42.52 Aligned_cols=166 Identities=13% Similarity=0.121 Sum_probs=83.8
Q ss_pred hhHHHHHHHHHHhhCCCcEEEeeCCCC--------------CCCC-cCCcChh-----hhHHHHhhcCCCCcEEEEeCCC
Q 003194 212 IDYIFISSLEVAQFLDLPLQIHTGFGD--------------KDLD-LRLSNPL-----HLRAILEDKRFSKCRFVLLHAS 271 (840)
Q Consensus 212 ~d~~l~~l~e~~~e~glPvq~H~G~gd--------------~~~~-~~~~~P~-----~L~~l~~~~~~P~l~~VllH~g 271 (840)
.+..+..+++.++++|+|+.+|..-.. .+.. ...+.|. .+..++.--+.-+.++.+.|.+
T Consensus 167 ~~~~l~~~l~~a~~~g~~v~vH~~~~~~~~~~~~~~~~~g~~~~~~~~~~~p~~~e~~av~~~~~la~~~g~~~~i~H~s 246 (448)
T 3hm7_A 167 HDETLLKGMKKIAALGSILAVHAESNEMVNALTTIAIEEQRLTVKDYSEARPIVSELEAVERILRFAQLTCCPIHICHVS 246 (448)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEECCCHHHHHHHHHHHHHTTCCSHHHHHHHSCHHHHHHHHHHHHHHHHHHTCCEEECCCC
T ss_pred CHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHhcCCcChhhccccCCHHHHHHHHHHHHHHHHHhCCCEEEEeCC
Confidence 344567778889999999999985310 0000 0001121 1222222101235788999987
Q ss_pred CchHHHHHHHHHhC-CEeEecccccCCCCcH------------------HHHHHHHHHHHHHCCCCcEEEecCCCCCccc
Q 003194 272 YPFSKEASYLAYVY-PQVYLDFGLAIPKLSV------------------QGMISSIKELLELAPTKKVMFSTDAYASPET 332 (840)
Q Consensus 272 ~p~~~e~~~la~~~-pNVyld~s~~~~~~~~------------------~g~~~~l~~~le~~~~~kilfgSD~~~~Pe~ 332 (840)
.....+....+... -+|++++......... ..-...+.+.+..+.. .+++||..++...
T Consensus 247 ~~~~~~~i~~ak~~G~~v~~e~~ph~l~l~~~~~~~~~~~~~~~Pplr~~~~~~~l~~~l~~g~~--~~i~tD~~p~~~~ 324 (448)
T 3hm7_A 247 SRKVLKRIKQAKGEGVNVSVETCPHYLLFSLDEFAEIGYLAKCAPPLRERQEVEDLWDGLMAGEI--DLISSDHSPSLPQ 324 (448)
T ss_dssp CHHHHHHHHHHHHTTCCEEEEECHHHHHCCHHHHHHHCSTTCCSSCCCCHHHHHHHHHHHHHTCC--CEECCCBCCCCGG
T ss_pred CHHHHHHHHHHHhcCCCEEEEechHHHccCHHHhcCCCCeEEEcCCCCCHHHHHHHHHHHhcCCc--cEEEeCCCCCCHH
Confidence 65544444444332 3677776541100000 0112344455554433 5689995433210
Q ss_pred c------h---hhHHHHHHHHHHHHhhhhcCCCCChhHHHHHHHHHHHHhHHHHhcCCCC
Q 003194 333 Y------F---LGAKRAREVVFSVLRDTCIDEDLSVGEAIEVAKDIFALNAAQFYKINLG 383 (840)
Q Consensus 333 ~------~---~~~~~~R~~l~~~l~~~v~~g~l~~~ea~~~~~~Il~~NA~rly~l~~~ 383 (840)
. + .+....-..+..++..++..+.++.. .+-+++..|++++|+++..
T Consensus 325 ~k~~~~~~~~~~G~~g~e~~l~~~~~~~~~~~~l~~~----~~~~~~t~~~A~~~g~~~~ 380 (448)
T 3hm7_A 325 MKTGKTIFEVWGGIAGCQNTLAVMLTEGYHKRKMPLT----QIVQLLSTEPAKRFGLYPQ 380 (448)
T ss_dssp GGCCSSTTTSCCCBCCTTTHHHHHHHHTTTTTCCCHH----HHHHHHTHHHHHHHTCTTT
T ss_pred HcccCCHhhCCCCCccHHHHHHHHHHHHHhcCCcCHH----HHHHHHhHHHHHHcCCCCC
Confidence 0 0 00000001233344556667788874 4566778999999999543
No 70
>3gri_A Dihydroorotase, dhoase; hydrolase, IDP00795, metal-binding, pyrimidine biosynthesis, structural genomics; 2.00A {Staphylococcus aureus subsp}
Probab=72.57 E-value=7.9 Score=42.69 Aligned_cols=163 Identities=11% Similarity=0.028 Sum_probs=82.7
Q ss_pred hhHHHHHHHHHHhhCCCcEEEeeCCCCC---CC--------C-cCCcChh-----hhHHHHhhcCCCCcEEEEeCCCCch
Q 003194 212 IDYIFISSLEVAQFLDLPLQIHTGFGDK---DL--------D-LRLSNPL-----HLRAILEDKRFSKCRFVLLHASYPF 274 (840)
Q Consensus 212 ~d~~l~~l~e~~~e~glPvq~H~G~gd~---~~--------~-~~~~~P~-----~L~~l~~~~~~P~l~~VllH~g~p~ 274 (840)
.+..+..+++.++++|+|+.+|...... +. . ...+.|. .+...+.--+..++++.+.|.+.+.
T Consensus 156 ~~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~~~~~g~~~~~~~~~~~p~~~E~~~v~r~~~la~~~g~~~~i~H~s~~~ 235 (424)
T 3gri_A 156 TASMMYEGMIEAAKVNKAIVAHCEDNSLIYGGAMHEGKRSKELGIPGIPNICESVQIARDVLLAEAAGCHYHVCHVSTKE 235 (424)
T ss_dssp SHHHHHHHHHHHHHHTCCEEECCCCGGGCTTCCEESSHHHHHHTCCEECTHHHHHHHHHHHHHHHHHTCCEEECSCCCHH
T ss_pred CHHHHHHHHHHHHhcCCEEEEeCCCHHHHhhhhhhcCccchhhCCCCCCHHHHHHHHHHHHHHHHHhCCcEEEEeCCCHH
Confidence 3446777889999999999999864310 00 0 0011221 1111111113457899999997655
Q ss_pred HHHHHHHHHhC-CEeEecccccC------------------CCCcHHHHHHHHHHHHHHCCCCcEEEecCCCCCccc---
Q 003194 275 SKEASYLAYVY-PQVYLDFGLAI------------------PKLSVQGMISSIKELLELAPTKKVMFSTDAYASPET--- 332 (840)
Q Consensus 275 ~~e~~~la~~~-pNVyld~s~~~------------------~~~~~~g~~~~l~~~le~~~~~kilfgSD~~~~Pe~--- 332 (840)
..+....+... -+|+.++.... |-.....-...+.+.+..+..+ +++||.-++...
T Consensus 236 ~~~~i~~ak~~G~~v~~e~~ph~l~l~~~~~~~~~~~~~~~Pplr~~~~~~~L~~~l~~G~i~--~igtDhap~~~~~k~ 313 (424)
T 3gri_A 236 SVRVIRDAKRAGIHVTAEVTPHHLLLTEDDIPGNNAIYKMNPPLRSTEDREALLEGLLDGTID--CIATDHAPHARDEKA 313 (424)
T ss_dssp HHHHHHHHHHTTCCEEEEECHHHHHCCGGGCCSSCGGGCCSSCCCCHHHHHHHHHHHHTTSSC--EECCCBCCCCHHHHT
T ss_pred HHHHHHHHHHcCCCEEEEecHHHHhcCHHHHhCcCceEEEeCCCCCHHHHHHHHHHHhcCCce--EEEcCCCCCCHHHcc
Confidence 54444444332 25665553310 1110111223455555544333 689996333210
Q ss_pred -----chhhHHHHHHHHHHHHhhhhcCCCCChhHHHHHHHHHHHHhHHHHhcC
Q 003194 333 -----YFLGAKRAREVVFSVLRDTCIDEDLSVGEAIEVAKDIFALNAAQFYKI 380 (840)
Q Consensus 333 -----~~~~~~~~R~~l~~~l~~~v~~g~l~~~ea~~~~~~Il~~NA~rly~l 380 (840)
.+.+....-..+..++..++.++.++.. .+-..+..|++++|++
T Consensus 314 ~~~~~~~~G~~g~e~~~~~~~~~~~~~~~~~~~----~~~~~~t~~~a~~~g~ 362 (424)
T 3gri_A 314 QPMEKAPFGIVGSETAFPLLYTHFVKNGDWTLQ----QLVDYLTIKPCETFNL 362 (424)
T ss_dssp SCTTTSCCCCCCTTTHHHHHHHHHTTTSSCCHH----HHHHHHTHHHHHHTTC
T ss_pred CCHhHCCCCCccccccHHHHHHHHHHcCCCCHH----HHHHHHhHHHHHHhCC
Confidence 0000000001233344556777889974 3444556899999998
No 71
>3mpg_A Dihydroorotase, dhoase; hydrolase; 2.60A {Bacillus anthracis}
Probab=71.62 E-value=12 Score=41.06 Aligned_cols=163 Identities=12% Similarity=0.057 Sum_probs=82.5
Q ss_pred hhHHHHHHHHHHhhCCCcEEEeeCCCCC---CC--------Cc-CCcChh-----hhHHHHhhcCCCCcEEEEeCCCCch
Q 003194 212 IDYIFISSLEVAQFLDLPLQIHTGFGDK---DL--------DL-RLSNPL-----HLRAILEDKRFSKCRFVLLHASYPF 274 (840)
Q Consensus 212 ~d~~l~~l~e~~~e~glPvq~H~G~gd~---~~--------~~-~~~~P~-----~L~~l~~~~~~P~l~~VllH~g~p~ 274 (840)
.+..+..+++.++++|+|+.+|..-... +. .. ..+.|. .+...+.--+..+.++.+.|.+...
T Consensus 157 ~~~~l~~~~~~a~~~g~~v~vH~~~~~~~~~~~~~~g~~~~~~~~~~~p~~~e~~~v~~~~~la~~~g~~~~i~H~s~~~ 236 (428)
T 3mpg_A 157 DASMMLAAMKRAAKLNMAVVAHCEENTLINKGCVHEGKFSEKHGLNGIPSVCESVHIARDILLAEAADCHYHVCHVSTKG 236 (428)
T ss_dssp CHHHHHHHHHHHHHTTCCEEECCCCGGGCTTCSEETTHHHHHTTCCEECTHHHHHHHHHHHHHHHHHTCCEEECSCCCHH
T ss_pred CHHHHHHHHHHHHhcCCeEEEECCChhHhhhHHhhcCccchhhCcCCCCHHHHHHHHHHHHHHHHHhCCCEEEEeCCCHH
Confidence 3445677889999999999999864210 00 00 011221 1211111012356789999997654
Q ss_pred HHHHHHHHHhC-CEeEeccccc------------------CCCC-cHHHHHHHHHHHHHHCCCCcEEEecCCCCCcccc-
Q 003194 275 SKEASYLAYVY-PQVYLDFGLA------------------IPKL-SVQGMISSIKELLELAPTKKVMFSTDAYASPETY- 333 (840)
Q Consensus 275 ~~e~~~la~~~-pNVyld~s~~------------------~~~~-~~~g~~~~l~~~le~~~~~kilfgSD~~~~Pe~~- 333 (840)
..+....+... -+|++++... .|.. .... ...+.+.+..+..+ +.+||..+++...
T Consensus 237 ~~~~i~~a~~~G~~v~~e~~p~~l~l~~~~~~~~~~~~~~~Pplr~~~~-~~~l~~~l~~G~i~--~i~tDh~p~~~~~k 313 (428)
T 3mpg_A 237 SVRVIRDAKRAGIKVTAEVTPHHLVLCEDDIPSADPNFKMNPPLRGKED-HEALIEGLLDGTID--MIATDHAPHTAEEK 313 (428)
T ss_dssp HHHHHHHHHHTTCCEEECBCHHHHHCCGGGCCSSCGGGCCSSCCCCHHH-HHHHHHHHHHTSSC--CBCCCBCCCCTTGG
T ss_pred HHHHHHHHHhcCCCEEEEEchHHhEECHHHHhCCCCeEEEeCCCCCHHH-HHHHHHHHhCCCCc--EEEcCCCCCCHHHc
Confidence 44444444322 2566544320 0111 1112 33555555555444 6899964432100
Q ss_pred -------hhhHHHHHHHHHHHHhhhhcCCCCChhHHHHHHHHHHHHhHHHHhcCC
Q 003194 334 -------FLGAKRAREVVFSVLRDTCIDEDLSVGEAIEVAKDIFALNAAQFYKIN 381 (840)
Q Consensus 334 -------~~~~~~~R~~l~~~l~~~v~~g~l~~~ea~~~~~~Il~~NA~rly~l~ 381 (840)
+.+.......+..++..++..+.++.. .+-+.+..|++++|+++
T Consensus 314 ~~~~~~~p~g~~g~e~~~~~~~~~~~~~~~~~~~----~~~~~~t~~~a~~~g~~ 364 (428)
T 3mpg_A 314 AQGIERAPFGITGFETAFPLLYTNLVKKGIITLE----QLIQFLTEKPADTFGLE 364 (428)
T ss_dssp GSCTTTSCSCCCCTTTHHHHHHHHTTTTTSSCHH----HHHHTTTHHHHHHHTCS
T ss_pred ccCHhhCCCCceehhhHHHHHHHHHHHcCCCCHH----HHHHHHhHHHHHHhCCC
Confidence 000000001233345556777888874 44455668999999986
No 72
>3e74_A Allantoinase; (beta/alpha)8-barrel domain, small beta-sheet domain, hydrolase, metal-binding, purine metabolism, zinc; HET: KCX; 2.10A {Escherichia coli}
Probab=69.01 E-value=21 Score=40.08 Aligned_cols=164 Identities=16% Similarity=0.170 Sum_probs=80.6
Q ss_pred hhHHHHHHHHHHhhCCCcEEEeeCCCC--------------CCCC-cCCcChh-----hhHHHHhhcCCCCcEEEEeCCC
Q 003194 212 IDYIFISSLEVAQFLDLPLQIHTGFGD--------------KDLD-LRLSNPL-----HLRAILEDKRFSKCRFVLLHAS 271 (840)
Q Consensus 212 ~d~~l~~l~e~~~e~glPvq~H~G~gd--------------~~~~-~~~~~P~-----~L~~l~~~~~~P~l~~VllH~g 271 (840)
++..+..+++.++++|+++.+|..-.. .+.. ...+.|. .+..++.--+.-+.++.+.|.+
T Consensus 185 ~~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~~~~~~~~g~~~~~~~~~~~p~~~e~~av~~~l~la~~~g~~lhi~Hvs 264 (473)
T 3e74_A 185 NDWQFFKGAQKLGELGQPVLVHCENALICDELGEEAKREGRVTAHDYVASRPVFTEVEAIRRVLYLAKVAGCRLHVCHVS 264 (473)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEECSCHHHHHHHHHHHHHHTCCSHHHHHHTSCHHHHHHHHHHHHHHHHHHTCCEEECSCC
T ss_pred CHHHHHHHHHHHHhcCCeEEEEecCHHHHHHHhhHHHhcCCcChhhcccCCCHHHHHHHHHHHHHHHHHhCCcEEEEeCC
Confidence 344567778888999999999976310 0000 0112221 1222222101234889999987
Q ss_pred CchHHHHHHHHHh-CCEeEeccccc------------------CCCCcHHHHHHHHHHHHHHCCCCcEEEecCCCCCccc
Q 003194 272 YPFSKEASYLAYV-YPQVYLDFGLA------------------IPKLSVQGMISSIKELLELAPTKKVMFSTDAYASPET 332 (840)
Q Consensus 272 ~p~~~e~~~la~~-~pNVyld~s~~------------------~~~~~~~g~~~~l~~~le~~~~~kilfgSD~~~~Pe~ 332 (840)
.....+....+.. -.+|+.+++.. .|.+....-+..+.+.++.+ ....++||..++...
T Consensus 265 t~~~l~li~~ak~~G~~vt~e~~ph~l~l~~~~~~~~~~~~~~~Pplr~~~~~~~L~~~l~~G--~~~~i~tDh~p~~~~ 342 (473)
T 3e74_A 265 SPEGVEEVTRARQEGQDITCESCPHYFVLDTDQFEEIGTLAKCSPPIRDLENQKGMWEKLFNG--EIDCLVSDHSPCPPE 342 (473)
T ss_dssp SHHHHHHHHHHHHTTCCEEEEECTHHHHCCHHHHHHHCGGGCCSSCCCCHHHHHHHHHHHHTT--CCCEECCCBCCCCTT
T ss_pred CHHHHHHHHHHHHcCCCeEEEEchHhhhcCHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHhCC--CCcEEEeCCCCCCHH
Confidence 6544444443332 23677766431 11110111123444444433 234689996444311
Q ss_pred -----c---hhhHHHHHHHHHHHHhhhhcCCCCChhHHHHHHHHHHHHhHHHHhcCC
Q 003194 333 -----Y---FLGAKRAREVVFSVLRDTCIDEDLSVGEAIEVAKDIFALNAAQFYKIN 381 (840)
Q Consensus 333 -----~---~~~~~~~R~~l~~~l~~~v~~g~l~~~ea~~~~~~Il~~NA~rly~l~ 381 (840)
+ +.+....-..+..++.+.+.++.++.. .+-+.+..|++++|+++
T Consensus 343 ~k~~~f~~~~~G~~g~e~~l~~~~~~~~~~~~~~~~----~~~~~~t~~~a~~~g~~ 395 (473)
T 3e74_A 343 MKAGNIMKAWGGIAGLQSCMDVMFDEAVQKRGMSLP----MFGKLMATNAADIFGLQ 395 (473)
T ss_dssp TTCSCTTTSCCCBCCGGGHHHHHHHHHTTTTCCCHH----HHHHHHTHHHHHHTTCT
T ss_pred HcccChhhcCCCcccHHhHHHHHHHHHHHcCCCCHH----HHHHHHhHHHHHHhCCC
Confidence 0 000000011222334446677889874 34445568899999996
No 73
>2ics_A Adenine deaminase; TIM barrel, binuclear zinc, adenine complex, amidohydrolase, structural genomics, PSI, protein structure initiative; HET: KCX ADE; 2.30A {Enterococcus faecalis} SCOP: b.92.1.8 c.1.9.14
Probab=63.99 E-value=34 Score=36.29 Aligned_cols=136 Identities=15% Similarity=0.112 Sum_probs=69.0
Q ss_pred HHHHHHHHHhh-CCCcEEEeeCCCCCCCCcCCcChhhhHHHHhhcCCCCcEEEEeCCCC--c---------hH-HHHHHH
Q 003194 215 IFISSLEVAQF-LDLPLQIHTGFGDKDLDLRLSNPLHLRAILEDKRFSKCRFVLLHASY--P---------FS-KEASYL 281 (840)
Q Consensus 215 ~l~~l~e~~~e-~glPvq~H~G~gd~~~~~~~~~P~~L~~l~~~~~~P~l~~VllH~g~--p---------~~-~e~~~l 281 (840)
.+..+++.+++ +|+||.+|.+-++. ....+...++ + . . ++.|+.. + .. .++..+
T Consensus 169 ~~~~~~~~a~~~~g~~v~~H~~~~~~-------~~~~~~~~~~--~-g--~-~~~H~~~~~~~~~~~~s~~~~~~~~~~~ 235 (379)
T 2ics_A 169 PLELAKQIQQENQEIPLMVHIGSAPP-------HLDEILALME--K-G--D-VLTHCFNGKENGILDQATDKIKDFAWQA 235 (379)
T ss_dssp HHHHHHHHHHTTTTCCEEEEECSSSS-------CHHHHHHHCC--T-T--C-EEESTTCCSTTSSEETTTTEECHHHHHH
T ss_pred HHHHHHHHHHHhcCCeEEEeCCCCcc-------hHHHHHHHhh--c-C--C-eeeeccCCCccchhhccCHHHHHHHHHH
Confidence 34556788999 99999999974321 1112222333 2 1 2 4567621 1 00 222222
Q ss_pred HHhCCEeEecccccCCCCcHHHHHHHHHHHHHHC-CCCcEEEecCCCCCcccchhh-HHHHHHHHHHHHhhhhcCCCCCh
Q 003194 282 AYVYPQVYLDFGLAIPKLSVQGMISSIKELLELA-PTKKVMFSTDAYASPETYFLG-AKRAREVVFSVLRDTCIDEDLSV 359 (840)
Q Consensus 282 a~~~pNVyld~s~~~~~~~~~g~~~~l~~~le~~-~~~kilfgSD~~~~Pe~~~~~-~~~~R~~l~~~l~~~v~~g~l~~ 359 (840)
+ ..+++++++...... + ...++++++.+ +.+ +++||+. |...+.. ...+.+.+. .+++ ..++.
T Consensus 236 ~--~~g~~~~~~p~~~~~---~-~~~~~~~~~~G~~~~--~l~TD~~--~~~~~~~~~~~~~~~l~----~~~~-~~ls~ 300 (379)
T 2ics_A 236 Y--NKGVVFDIGHGTDSF---N-FHVAETALREGMKAA--SISTDIY--IRNRENGPVYDLATTME----KLRV-VGYDW 300 (379)
T ss_dssp H--HTTCEEECCCTTTSC---C-HHHHHHHHHTTCCCS--BCCCCBC--HHHHHSSSCCCHHHHHH----HHHH-HTCCH
T ss_pred H--HcCCEEEecCCCCCc---C-HHHHHHHHHcCCCcc--eEeccCc--ccCCCCCcHhHHHHHHH----HHHH-cCCCH
Confidence 2 236777765321111 1 23466677764 555 8999953 1100000 001122222 2222 24776
Q ss_pred hHHHHHHHHHHHHhHHHHhcCCC
Q 003194 360 GEAIEVAKDIFALNAAQFYKINL 382 (840)
Q Consensus 360 ~ea~~~~~~Il~~NA~rly~l~~ 382 (840)
+.+-+++..|++|+|+++.
T Consensus 301 ----~~~~~~~T~n~A~~lgl~~ 319 (379)
T 2ics_A 301 ----PEIIEKVTKAPAENFHLTQ 319 (379)
T ss_dssp ----HHHHHTTTHHHHHHTTCTT
T ss_pred ----HHHHHHHHHHHHHHhCCCC
Confidence 3566777899999999964
No 74
>3nqb_A Adenine deaminase 2; PSI-II, structural genomics, protein structure initiative, N SGX research center for structural genomics, nysgxrc; 2.21A {Agrobacterium tumefaciens} PDB: 3t81_A 3t8l_A
Probab=61.28 E-value=85 Score=36.38 Aligned_cols=136 Identities=15% Similarity=-0.008 Sum_probs=74.8
Q ss_pred hhHHHHHHHHHHhhCCCcEEEeeCCCCCCCCcCCcChhhhHHHHhhcCCCCcEEEEeCCCCchHHHHHHHHHhCCEeEec
Q 003194 212 IDYIFISSLEVAQFLDLPLQIHTGFGDKDLDLRLSNPLHLRAILEDKRFSKCRFVLLHASYPFSKEASYLAYVYPQVYLD 291 (840)
Q Consensus 212 ~d~~l~~l~e~~~e~glPvq~H~G~gd~~~~~~~~~P~~L~~l~~~~~~P~l~~VllH~g~p~~~e~~~la~~~pNVyld 291 (840)
.+..+...++.+.++|+||.+|... .....|..+.+ .- +.. .|+.... .++...... .+|+.
T Consensus 200 ~d~~l~~~l~~A~~~g~pV~~Ha~~---------~~~~~L~~~~~--aG--v~~--~H~~~~~-eea~e~l~~--G~~i~ 261 (608)
T 3nqb_A 200 RDPRMSGIVQAGLAAEKLVCGHARG---------LKNADLNAFMA--AG--VSS--DHELVSG-EDLMAKLRA--GLTIE 261 (608)
T ss_dssp TCHHHHHHHHHHHHHTCEEEECCTT---------CCHHHHHHHHH--TT--CCE--ECCCCSH-HHHHHHHHT--TCEEE
T ss_pred CcHHHHHHHHHHHHcCCEEEEcCCC---------CCHHHHHHHHH--cC--CCe--eeccCCH-HHHHHHHHC--CCEEE
Confidence 4556778889999999999999752 12234555555 22 222 6875543 444444432 55555
Q ss_pred ccccCCCCcHHHHHHHHHHHHH--HCCCCcEEEecCCCCCcccchhhHHHHHHHHHHHHhhhhcCCCCChhHHHHHHHHH
Q 003194 292 FGLAIPKLSVQGMISSIKELLE--LAPTKKVMFSTDAYASPETYFLGAKRAREVVFSVLRDTCIDEDLSVGEAIEVAKDI 369 (840)
Q Consensus 292 ~s~~~~~~~~~g~~~~l~~~le--~~~~~kilfgSD~~~~Pe~~~~~~~~~R~~l~~~l~~~v~~g~l~~~ea~~~~~~I 369 (840)
+.... .+ . ...+..++. ..+..+++++||+. .|...+ ... .+...+...++. .++. +.+-++
T Consensus 262 i~gs~---~~-~-~~~l~~~i~~~~~~g~~v~lgTD~~-~p~~~~-~~g----~l~~~v~~~~~~-Gls~----~eal~~ 325 (608)
T 3nqb_A 262 LRGSH---DH-L-LPEFVAALNTLGHLPQTVTLCTDDV-FPDDLL-QGG----GLDDVVRRLVRY-GLKP----EWALRA 325 (608)
T ss_dssp EESSS---GG-G-HHHHHHHHHHHTSCCTTEEEECBSC-CHHHHH-HTC----SHHHHHHHHHHT-TCCH----HHHHHH
T ss_pred Eeccc---cc-c-HHHHHHHHHhHhhcCceEEEecCCC-CCcchh-hhc----chHHHHHHHHHc-CCCH----HHHHHH
Confidence 54211 11 1 123444444 45669999999952 242111 100 111222233333 4675 356667
Q ss_pred HHHhHHHHhcCC
Q 003194 370 FALNAAQFYKIN 381 (840)
Q Consensus 370 l~~NA~rly~l~ 381 (840)
...|++++|+++
T Consensus 326 aT~n~A~~lgl~ 337 (608)
T 3nqb_A 326 ATLNAAQRLGRS 337 (608)
T ss_dssp HTHHHHHHHTCT
T ss_pred HHHHHHHHcCCC
Confidence 789999999994
No 75
>4f0r_A 5-methylthioadenosine/S-adenosylhomocysteine DEAM; structural genomics, PSI-biology; HET: MSE MTA; 1.80A {Chromobacterium violaceum} PDB: 4f0s_A*
Probab=59.12 E-value=34 Score=37.36 Aligned_cols=158 Identities=18% Similarity=0.125 Sum_probs=75.3
Q ss_pred hhHHHHHHHHHHhhCCCcEEEeeCCCCCCCC----cCCcChhhhHHHHhhcCCCCcEEEEeCCCCchHHHHHHHHHhCCE
Q 003194 212 IDYIFISSLEVAQFLDLPLQIHTGFGDKDLD----LRLSNPLHLRAILEDKRFSKCRFVLLHASYPFSKEASYLAYVYPQ 287 (840)
Q Consensus 212 ~d~~l~~l~e~~~e~glPvq~H~G~gd~~~~----~~~~~P~~L~~l~~~~~~P~l~~VllH~g~p~~~e~~~la~~~pN 287 (840)
....+..+++.|.++|+|+.+|+.-...... .....+ +..+.+. ...+-+.++.|+.+-...++..++.. +
T Consensus 198 ~~~~l~~~~~~A~~~g~~v~iH~~~~~~~~~~~~~~~g~~~--i~~~~~~-g~~~~~~~~~H~~~~~~~~~~~~~~~--g 272 (447)
T 4f0r_A 198 SDDTFRKVVTLAEQEDMLIHCHIHETADEVNNSVKEHGQRP--LARLQRL-GLLSPRLVAAHMVHLNDAEVELAARH--G 272 (447)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEEESCCHHHHHHHHHHHSSCH--HHHHHHH-TCCSTTEEEEECCSCCHHHHHHHHHH--T
T ss_pred CHHHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCCH--HHHHHHc-CCCCCCcEEEeccCCCHHHHHHHHHc--C
Confidence 3446778889999999999999964310000 000112 2222222 34556788899865444445555543 2
Q ss_pred eEecccccCCCCcHHHHHHHHHHHHHHCCCCcEEEecCCCCCcccchhhHHHHHHHHHHHHhhhh--cCCCCChhHHHHH
Q 003194 288 VYLDFGLAIPKLSVQGMISSIKELLELAPTKKVMFSTDAYASPETYFLGAKRAREVVFSVLRDTC--IDEDLSVGEAIEV 365 (840)
Q Consensus 288 Vyld~s~~~~~~~~~g~~~~l~~~le~~~~~kilfgSD~~~~Pe~~~~~~~~~R~~l~~~l~~~v--~~g~l~~~ea~~~ 365 (840)
+++......+.....+. ..++.+++.+ -++.+|||+...+.. ......++.. ..+.... ....++.. .
T Consensus 273 ~~~~~~p~~~~~~~~~~-~~~~~~~~~G--v~v~lgTD~~~~~~~-~~~~~~~~~~--~~~~~~~~~~~~~l~~~----~ 342 (447)
T 4f0r_A 273 LSTAHNPASNMKLASGI-SPVSKLMDAG--VAVGIGTDGAASNNK-LDMLAETRLA--ALLAKVGTLDPTSVPAA----A 342 (447)
T ss_dssp CEEEECHHHHHHTTCCC-CCHHHHHHTT--CEEEECCCCGGGTCC-CCHHHHHHHH--HHHHHHHHTCTTSSCHH----H
T ss_pred CEEEECchhhhhcCCCC-CcHHHHHHCC--CcEEEeCCCCcCCCC-CCHHHHHHHH--HHHhhhhccCCCCCCHH----H
Confidence 33322111000000010 1234444433 278899996432110 0111112211 1111111 23467764 3
Q ss_pred HHHHHHHhHHHHhcCCCCc
Q 003194 366 AKDIFALNAAQFYKINLGV 384 (840)
Q Consensus 366 ~~~Il~~NA~rly~l~~~~ 384 (840)
+-+.+-.|++++++++...
T Consensus 343 al~~~T~n~A~~lg~~~~~ 361 (447)
T 4f0r_A 343 AIRMATLNGARALGIADKV 361 (447)
T ss_dssp HHHHHTHHHHHHTTCTTTS
T ss_pred HHHHHHHHHHHHhCCCCCc
Confidence 4455668999999986543
No 76
>3sfw_A Dihydropyrimidinase; hydrolase, zinc binding; HET: KCX; 1.73A {Brevibacillus agri} PDB: 1yny_A 1k1d_A*
Probab=57.89 E-value=81 Score=34.82 Aligned_cols=165 Identities=15% Similarity=0.082 Sum_probs=82.3
Q ss_pred hhHHHHHHHHHHhhCCCcEEEeeCCC--------------CCCCCc-CCcChh-----hhHHHHhhcCCCCcEEEEeCCC
Q 003194 212 IDYIFISSLEVAQFLDLPLQIHTGFG--------------DKDLDL-RLSNPL-----HLRAILEDKRFSKCRFVLLHAS 271 (840)
Q Consensus 212 ~d~~l~~l~e~~~e~glPvq~H~G~g--------------d~~~~~-~~~~P~-----~L~~l~~~~~~P~l~~VllH~g 271 (840)
.+..+..+++.++++|+++.+|.-.. ..+... ..+.|. .+...+.--+..+.++.+.|.+
T Consensus 162 ~~~~l~~~~~~a~~~g~~v~~Hae~~~~~~~~~~~~~~~G~~~~~~~~~~~p~~~e~~av~~~~~la~~~g~~~hi~H~s 241 (461)
T 3sfw_A 162 DDETLFKTLIRAKELGALVQVHAENGDVLDYLTKQALAEGNTDPIYHAYTRPPEAEGEATGRAIALTALADAQLYVVHVS 241 (461)
T ss_dssp CHHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHHHHHHTTCCSTHHHHHTSCHHHHHHHHHHHHHHHHHTTCEEEECSCC
T ss_pred CHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHHHHHHHhcCCCChhHhcccCCHHHHHHHHHHHHHHHHHhCCCEEEEecC
Confidence 34456677888899999999996421 000000 011221 1222222112347899999987
Q ss_pred CchHHHHHHHHHhC-CEeEeccccc---------------------CCCCcHHHHHHHHHHHHHHCCCCcEEEecCCCCC
Q 003194 272 YPFSKEASYLAYVY-PQVYLDFGLA---------------------IPKLSVQGMISSIKELLELAPTKKVMFSTDAYAS 329 (840)
Q Consensus 272 ~p~~~e~~~la~~~-pNVyld~s~~---------------------~~~~~~~g~~~~l~~~le~~~~~kilfgSD~~~~ 329 (840)
..-..+....+... .+|+.++... .|.+....-...+.+.+..+ ...+++||..++
T Consensus 242 ~~~~l~~i~~ak~~G~~vt~e~~ph~l~l~~~~~~~~~~~~~~~~~~Pplr~~~~~~aL~~~l~~G--~~~~i~sD~~p~ 319 (461)
T 3sfw_A 242 CADAVRRIAEAREKGWNVYGETCPQYLVLDITALEKPDFEGAKYVWSPPLREKWNQDVLWSALKNG--ILQTVGSDHCPF 319 (461)
T ss_dssp SHHHHHHHHHHHHTTCEEEEEECHHHHHCCGGGGGCTTTGGGGGCCSSCCCCTHHHHHHHHHHHTT--SSCEECCCBCCC
T ss_pred cHHHHHHHHHHHhcCCcEEEeeccceEEEcHHHhcCccccCCcEEEcCCCCChHHHHHHHHHHhcC--CceEEECCCCCC
Confidence 64443444444332 3665554331 01110011123444454433 235789996554
Q ss_pred c-cc-------ch----hhHHHHHHHHHHHHhhhhcCCCCChhHHHHHHHHHHHHhHHHHhcCCC
Q 003194 330 P-ET-------YF----LGAKRAREVVFSVLRDTCIDEDLSVGEAIEVAKDIFALNAAQFYKINL 382 (840)
Q Consensus 330 P-e~-------~~----~~~~~~R~~l~~~l~~~v~~g~l~~~ea~~~~~~Il~~NA~rly~l~~ 382 (840)
. +. .+ .+.......+..++...+..+.++.. .+-..+..|++++++++.
T Consensus 320 ~~~~~k~~~~~~~~~~~~G~~g~e~~~~~~~~~~~~~~~~~~~----~~~~~~t~~~a~~~g~~~ 380 (461)
T 3sfw_A 320 NFSGQKELGRRDFTKIPNGGPIIEDRMTILFSEGVRKGKISLN----QFVDITSTKVAKLFGMFP 380 (461)
T ss_dssp CTTTTGGGGTTCGGGSCCCBCCTTTHHHHHHHHTTTTTSSCHH----HHHHHHTHHHHHHHTCTT
T ss_pred CchhhhhcccCCHhhCCCCCccHHHHHHHHHHHHHHcCCCCHH----HHHHHHhHHHHHHcCCCC
Confidence 3 10 00 00000011233345556777889974 445566789999999854
No 77
>4aql_A Guanine deaminase; hydrolase, purine metabolism; HET: TXC; 1.99A {Homo sapiens} PDB: 2uz9_A* 3e0l_A
Probab=54.94 E-value=1.1e+02 Score=33.91 Aligned_cols=158 Identities=16% Similarity=0.156 Sum_probs=74.0
Q ss_pred hhHHHHHHHHHHhhCCCcEEEeeCCCCCCCC-----cC-CcChhhhHHHHhhcCCCCcEEEEeCCCCchHHHHHHHHHhC
Q 003194 212 IDYIFISSLEVAQFLDLPLQIHTGFGDKDLD-----LR-LSNPLHLRAILEDKRFSKCRFVLLHASYPFSKEASYLAYVY 285 (840)
Q Consensus 212 ~d~~l~~l~e~~~e~glPvq~H~G~gd~~~~-----~~-~~~P~~L~~l~~~~~~P~l~~VllH~g~p~~~e~~~la~~~ 285 (840)
.+..+..+.+.|.++|+++++|.+-...... .. ...| ++ ++.+-...+-+.++.|+-+--..+...++..-
T Consensus 241 s~e~l~~~~~~A~~~g~~v~~H~~e~~~e~~~~~~~~~~~~~~--~~-~~~~~g~l~~~~~~~H~~~l~~~~~~~l~~~g 317 (476)
T 4aql_A 241 SETLMGELGNIAKTRDLHIQSHISENRDEVEAVKNLYPSYKNY--TS-VYDKNNLLTNKTVMAHGCYLSAEELNVFHERG 317 (476)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEESCSHHHHHHHHHHCTTSSSH--HH-HHHTTTCCSTTEEEEECTTCCHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHcCCceEEEecCCHHHHHHHHHHhCCCCCH--HH-HHHHcCCCCCCEEEEeCCCCCHHHHHHHHHcC
Confidence 4456778899999999999999864311000 00 0122 22 22211233456788998654445555555433
Q ss_pred CEeEecccccCCCCcHHHHHHHHHHHHHHCCCCcEEEecCCCCCcccchhhHHHHHHHH--HHHHhh-hhcCCCCChhHH
Q 003194 286 PQVYLDFGLAIPKLSVQGMISSIKELLELAPTKKVMFSTDAYASPETYFLGAKRAREVV--FSVLRD-TCIDEDLSVGEA 362 (840)
Q Consensus 286 pNVyld~s~~~~~~~~~g~~~~l~~~le~~~~~kilfgSD~~~~Pe~~~~~~~~~R~~l--~~~l~~-~v~~g~l~~~ea 362 (840)
-.|-.....-.. . ..|. ..++.+++.+ -++.+|||+....... -...+|... .+.+.. ......++..
T Consensus 318 ~~v~~~P~sn~~-l-~~g~-~p~~~~~~~G--v~v~lGtD~~~~~~~~--~~~~~~~a~~~~~~~~~~~~~~~~l~~~-- 388 (476)
T 4aql_A 318 ASIAHCPNSNLS-L-SSGF-LNVLEVLKHE--VKIGLGTDVAGGYSYS--MLDAIRRAVMVSNILLINKVNEKSLTLK-- 388 (476)
T ss_dssp CEEEECHHHHHH-T-TCCC-CCHHHHHHTT--CEEEECCCTTTSSCCC--HHHHHHHHHHHHHHHHHTTSSSSCCCHH--
T ss_pred CEEEECchhhhh-h-Ccch-HHHHHHHHCC--CcEEEeCCCCCCCCCC--HHHHHHHHHHHHhhhhcccCCCCcCCHH--
Confidence 222211110000 0 0010 0234444433 3678999964321111 112223221 111111 1122467764
Q ss_pred HHHHHHHHHHhHHHHhcCCCC
Q 003194 363 IEVAKDIFALNAAQFYKINLG 383 (840)
Q Consensus 363 ~~~~~~Il~~NA~rly~l~~~ 383 (840)
+..+ ..-.|+++.++++..
T Consensus 389 -~al~-~aT~~~A~~lgl~~~ 407 (476)
T 4aql_A 389 -EVFR-LATLGGSQALGLDGE 407 (476)
T ss_dssp -HHHH-HHTHHHHHHTTCTTT
T ss_pred -HHHH-HHHHHHHHHhCCCCC
Confidence 3444 445777788888643
No 78
>1nxi_A Conserved hypothetical protein VC0424; structural genomics, AB sandwich, COG 3076, ATCC NO. 51394D, NESG target OP3, PSI; NMR {Vibrio cholerae} SCOP: d.58.47.1
Probab=53.64 E-value=35 Score=31.32 Aligned_cols=91 Identities=16% Similarity=0.123 Sum_probs=62.8
Q ss_pred HHHHHHHHHHhcCceeeeeeeeEEEEEeecccCCCCCcccCCCCCcccCCccccchHHHHHHHHHHHhCCCceeeec-c-
Q 003194 510 LRKVSRLLKEEFNLVLNAGFEIEFYLLKSVLREGKEEWVPIDFTPYCSTAAYDAVSPVFQEVLADLHSLNISVEQLH-A- 587 (840)
Q Consensus 510 Lkr~~~~~~~~~G~~~~~g~E~EF~l~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~l~~~Gi~ve~~h-~- 587 (840)
=+++++.+++ -|..+..-.++||++.=+ -.+-++.+...+.+.|..|+..- -
T Consensus 21 n~~Vl~~L~e-~Gddl~~~r~IEH~~~F~-------------------------de~~~e~~a~~~~~~Gy~v~~~~~~e 74 (132)
T 1nxi_A 21 TRDIIQALLE-DGSDPDALYEIEHHLFAE-------------------------DFDKLEKAAVEAFKMGFEVLEAEETE 74 (132)
T ss_dssp HHHHHHHHHH-HTCCTTSCEEEEEEEEES-------------------------CHHHHHHHHHHHHHHTCCCBCCCCBC
T ss_pred HHHHHHHHHh-CCCCcCCCeEEEEEEEeC-------------------------CHHHHHHHHHHHHHCCCEEEeccccc
Confidence 3567777874 599999999999998744 12445666777788998886322 2
Q ss_pred -CCCCCceEEecCcchHHHHHhHHHHHHHHHHHHHHHcCCe
Q 003194 588 -EAGKGQFEIALGHTVAAKAADNLIFTREVLRAVARKHGLL 627 (840)
Q Consensus 588 -E~gpGQ~Ei~l~~~~~l~aaD~~~~~r~~ik~vA~~~Gl~ 627 (840)
|.|-..|++.+.-...+...+=.-...++++ +|+++|-.
T Consensus 75 ~e~g~~~~~~~i~~~~~l~~~~I~~~~~~L~~-lA~~~~G~ 114 (132)
T 1nxi_A 75 DEDGNKLLCFDATMQSALDAKLIDEQVEKLVN-LAEKFDII 114 (132)
T ss_dssp CSSCSSBEEEEEEEEECSCHHHHHHHHHHHHH-HHHHHTCE
T ss_pred CCCCceeEEEEEEEeccCCHHHHHHHHHHHHH-HHHHhCcE
Confidence 3333479999988887776655555555555 77777653
No 79
>2qs8_A XAA-Pro dipeptidase; amidohydrolase, TIM barrel, protein structure initiative, PSI-2, NYSGXRC, structural genomics; 2.33A {Alteromonas macleodii} SCOP: b.92.1.9 c.1.9.18
Probab=53.21 E-value=1.6e+02 Score=31.54 Aligned_cols=138 Identities=11% Similarity=0.050 Sum_probs=70.4
Q ss_pred hhhHHHHHHHHHHhhCCCcEEEeeCCCCCCCCcCCcChhhhHHHHhhcCCCCcEEEEeCCCCchHHHHHHHHHhCCEeEe
Q 003194 211 LIDYIFISSLEVAQFLDLPLQIHTGFGDKDLDLRLSNPLHLRAILEDKRFSKCRFVLLHASYPFSKEASYLAYVYPQVYL 290 (840)
Q Consensus 211 l~d~~l~~l~e~~~e~glPvq~H~G~gd~~~~~~~~~P~~L~~l~~~~~~P~l~~VllH~g~p~~~e~~~la~~~pNVyl 290 (840)
+.+..+..+++.|.++|+++.+|.. + ..-+..+++.+ . -.+.|+..-....+..++.. ++++
T Consensus 213 ~~~~~l~~~~~~A~~~g~~v~~H~~-~----------~~~i~~~~~~g--~---~~i~H~~~~~~~~i~~l~~~--gv~v 274 (418)
T 2qs8_A 213 FTQEEVDAVVSAAKDYGMWVAVHAH-G----------AEGMKRAIKAG--V---DSIEHGTFMDLEAMDLMIEN--GTYY 274 (418)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEEEEC-S----------HHHHHHHHHHT--C---SEEEECTTCCHHHHHHHHHH--TCEE
T ss_pred CCHHHHHHHHHHHHHcCCEEEEEEC-C----------HHHHHHHHHcC--C---CEEEECCCCCHHHHHHHHHC--CCEE
Confidence 3445677888999999999999985 2 11234444422 1 14578754333333333322 3444
Q ss_pred cccc-------------cCCCCc--HH------HHHHHHHHHHHHCCCCcEEEecCCCCCcccchhhHHHHHHHHHHHHh
Q 003194 291 DFGL-------------AIPKLS--VQ------GMISSIKELLELAPTKKVMFSTDAYASPETYFLGAKRAREVVFSVLR 349 (840)
Q Consensus 291 d~s~-------------~~~~~~--~~------g~~~~l~~~le~~~~~kilfgSD~~~~Pe~~~~~~~~~R~~l~~~l~ 349 (840)
.+.. .++... .. .....++.+++.+. ++.+|||+...|.... ...++.
T Consensus 275 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gv--~v~~gTD~~~~~~~~~--~~e~~~------- 343 (418)
T 2qs8_A 275 VPTISAGEFVAEKSKIDNFFPEIVRPKAASVGPQISDTFRKAYEKGV--KIAFGTDAGVQKHGTN--WKEFVY------- 343 (418)
T ss_dssp ECCHHHHHHHHHHTTSTTSSCTTTHHHHHHHHHHHHHHHHHHHHHTC--CBCCCCCBTTBCTTCT--THHHHH-------
T ss_pred eeeechHHHhhhhccccCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC--EEEEeCCCCcCCcchH--HHHHHH-------
Confidence 3331 011100 00 00124566666543 6889999755442111 111211
Q ss_pred hhhcCCCCChhHHHHHHHHHHHHhHHHHhcCCCC
Q 003194 350 DTCIDEDLSVGEAIEVAKDIFALNAAQFYKINLG 383 (840)
Q Consensus 350 ~~v~~g~l~~~ea~~~~~~Il~~NA~rly~l~~~ 383 (840)
+++. .++.. .+=+.+-.|++++++++..
T Consensus 344 -~~~~-gls~~----eal~~~T~n~A~~lg~~~~ 371 (418)
T 2qs8_A 344 -MVEN-GMPAM----KAIQSATMETAKLLRIEDK 371 (418)
T ss_dssp -HHHT-TCCHH----HHHHHTTHHHHHHTTCTTT
T ss_pred -HHHc-CCCHH----HHHHHHHHHHHHHhCCCCC
Confidence 1222 57764 3344556788899998643
No 80
>3feq_A Putative amidohydrolase; unknown source, sargasso SEA, structural GEN protein structure initiative, PSI; 2.63A {Unidentified} PDB: 3lwy_A* 3n2c_A*
Probab=52.23 E-value=94 Score=33.33 Aligned_cols=138 Identities=10% Similarity=0.000 Sum_probs=70.5
Q ss_pred hhhHHHHHHHHHHhhCCCcEEEeeCCCCCCCCcCCcChhhhHHHHhhcCCCCcEEEEeCCCCchHHHHHHHHHhCCEeEe
Q 003194 211 LIDYIFISSLEVAQFLDLPLQIHTGFGDKDLDLRLSNPLHLRAILEDKRFSKCRFVLLHASYPFSKEASYLAYVYPQVYL 290 (840)
Q Consensus 211 l~d~~l~~l~e~~~e~glPvq~H~G~gd~~~~~~~~~P~~L~~l~~~~~~P~l~~VllH~g~p~~~e~~~la~~~pNVyl 290 (840)
+.+..+..+++.|.++|+++.+|.. + ...+...++.+. + .+.|+.......+..++.. ++++
T Consensus 209 ~~~e~l~~~~~~A~~~g~~v~~H~~-~----------~~~i~~~l~~g~--~---~i~H~~~~~~~~~~~l~~~--gv~~ 270 (423)
T 3feq_A 209 YSEDEIRAIVDEAEAANTYVMAHAY-T----------GRAIARAVRCGV--R---TIEHGNLVDEAAAKLMHEH--GAFV 270 (423)
T ss_dssp SCHHHHHHHHHHHHHTTCCEEEEEE-E----------HHHHHHHHHHTC--C---EEEEEEECCHHHHHHHHHH--TCEE
T ss_pred CCHHHHHHHHHHHHHCCCeEEEEeC-C----------hHHHHHHHHcCC--C---EEeccCcCCHHHHHHHHHC--CCcc
Confidence 4455678889999999999999986 2 112444444221 1 3456632222223333322 3444
Q ss_pred ccc--------------ccCCCC-cHH-----HHHHHHHHHHHHCCCCcEEEecCCCCCcccchhhHHHHHHHHHHHHhh
Q 003194 291 DFG--------------LAIPKL-SVQ-----GMISSIKELLELAPTKKVMFSTDAYASPETYFLGAKRAREVVFSVLRD 350 (840)
Q Consensus 291 d~s--------------~~~~~~-~~~-----g~~~~l~~~le~~~~~kilfgSD~~~~Pe~~~~~~~~~R~~l~~~l~~ 350 (840)
... .+.+.. ... .....++.+++.+. ++.+|||+...|... ..++ +. .
T Consensus 271 ~pt~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~Gv--~v~~gTD~~~~~~~~-----~~~e-~~-~--- 338 (423)
T 3feq_A 271 VPTLVTYDALAKHGAEFGMPPESVAKVASVQQKGRESLEIYANAGV--KMGFGSDLLGEMHAF-----QSGE-FR-I--- 338 (423)
T ss_dssp ECCTHHHHHHHHHTGGGTCCTTTSSTHHHHHHHHHHHHHHHHHHTC--CBCCCCCCCGGGGGG-----TTHH-HH-H---
T ss_pred ccchHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHHHHHCCC--EEEECCCCCCCCCcc-----hHHH-HH-H---
Confidence 221 011111 000 12234666666553 788999965433211 1111 11 1
Q ss_pred hhcCCCCChhHHHHHHHHHHHHhHHHHhcCCCCc
Q 003194 351 TCIDEDLSVGEAIEVAKDIFALNAAQFYKINLGV 384 (840)
Q Consensus 351 ~v~~g~l~~~ea~~~~~~Il~~NA~rly~l~~~~ 384 (840)
+ .+. ++.. .+=+..-.|++++++++...
T Consensus 339 ~-~~~-ls~~----eal~~aT~~~A~~lg~~~~~ 366 (423)
T 3feq_A 339 R-AEV-LGNL----EALRSATTVAAEIVNMQGQL 366 (423)
T ss_dssp H-HTT-SCHH----HHHHTTTHHHHHHTTCBTTB
T ss_pred H-Hhh-CCHH----HHHHHHHHHHHHHhCCCCCc
Confidence 1 223 7764 33445668999999987543
No 81
>3gip_A N-acyl-D-glutamate deacylase; amidohydrolase family, hydrolase; 1.50A {Bordetella bronchiseptica} PDB: 3giq_A*
Probab=50.62 E-value=86 Score=34.91 Aligned_cols=57 Identities=9% Similarity=0.028 Sum_probs=33.2
Q ss_pred CcEEEecCCCCCcccchhhHHHHHHHHHHHHhhhhc-CCCCChhHHHHHHHHHHHHhHHHHhcCC
Q 003194 318 KKVMFSTDAYASPETYFLGAKRAREVVFSVLRDTCI-DEDLSVGEAIEVAKDIFALNAAQFYKIN 381 (840)
Q Consensus 318 ~kilfgSD~~~~Pe~~~~~~~~~R~~l~~~l~~~v~-~g~l~~~ea~~~~~~Il~~NA~rly~l~ 381 (840)
...++|||+........++. --.+..++..++. .+.++..+ .+ ..+-.|++++++++
T Consensus 358 ~~~~~gsD~~~~~~~~~~~~---~~~~~~~~~~~v~~~~~~~~~~---~~-~~~t~~~a~~~g~~ 415 (480)
T 3gip_A 358 PCCMVGSDGLPNDARPHPRL---WGSFTRVLGRYVREARLMTLEQ---AV-ARMTALPARVFGFA 415 (480)
T ss_dssp TTEEECCCCCTTCSSCCTHH---HHHHHHHHHCCCCCTCSSCHHH---HH-HHHTHHHHHHHTCT
T ss_pred CCeEEecCCcccCCCCChhh---hhhHHHHHHHHhhhcCCCCHHH---HH-HHHHHHHHHHcCCC
Confidence 45778999744322111111 1133456677776 47798753 44 44557888889985
No 82
>1zpv_A ACT domain protein; structural genomics, PSI, protein structure INIT midwest center for structural genomics, MCSG, unknown funct; 1.90A {Streptococcus pneumoniae} SCOP: d.58.18.7
Probab=47.98 E-value=13 Score=31.25 Aligned_cols=66 Identities=8% Similarity=0.175 Sum_probs=50.5
Q ss_pred HHHHHHHHHHHhCCCceeeeccCCCCCceEEecCcchHHHHHhHHHHHHHHHHHHHHHcCCeeEeccc
Q 003194 566 PVFQEVLADLHSLNISVEQLHAEAGKGQFEIALGHTVAAKAADNLIFTREVLRAVARKHGLLATFVPK 633 (840)
Q Consensus 566 ~~~~~i~~~l~~~Gi~ve~~h~E~gpGQ~Ei~l~~~~~l~aaD~~~~~r~~ik~vA~~~Gl~ATFmpK 633 (840)
-++.++...+.+.|++|..++.....|.|.+.+.-.-+ ..+++-.++..+++++.++|+.+++.|.
T Consensus 17 Gila~vt~~la~~~~NI~~i~~~~~~~~~~~~i~v~~~--~~~~l~~l~~~L~~~~~~~~~~~~~~~~ 82 (91)
T 1zpv_A 17 GIVAGVSGKIAELGLNIDDISQTVLDEYFTMMAVVSSD--EKQDFTYLRNEFEAFGQTLNVKINIQSA 82 (91)
T ss_dssp THHHHHHHHHHHTTCEEEEEEEEEETTEEEEEEEEEES--SCCCHHHHHHHHHHHHHHHTEEEEEEEG
T ss_pred CHHHHHHHHHHHcCCCEEEEEeEEEcCEEEEEEEEEeC--CCCCHHHHHHHHHHHHHHcCCEEEEeeH
Confidence 47889999999999999988877656877776654211 1235666778889999999999988765
No 83
>3be7_A Zn-dependent arginine carboxypeptidase; unknown source, amidohydrolase, sargasso SEA, structural GEN protein structure initiative, PSI; HET: ARG; 2.30A {Unidentified} SCOP: b.92.1.9 c.1.9.18 PDB: 3dug_A*
Probab=47.94 E-value=1.2e+02 Score=32.24 Aligned_cols=135 Identities=13% Similarity=0.033 Sum_probs=69.2
Q ss_pred hhHHHHHHHHHHhhCCCcEEEeeCCCCCCCCcCCcChhhhHHHHhhcCCCCcEEEEeCCCCchHHHHHHHHHhCCEeEec
Q 003194 212 IDYIFISSLEVAQFLDLPLQIHTGFGDKDLDLRLSNPLHLRAILEDKRFSKCRFVLLHASYPFSKEASYLAYVYPQVYLD 291 (840)
Q Consensus 212 ~d~~l~~l~e~~~e~glPvq~H~G~gd~~~~~~~~~P~~L~~l~~~~~~P~l~~VllH~g~p~~~e~~~la~~~pNVyld 291 (840)
....+..+++.|.++|+++.+|..-. .-+..+++.+ . -.+.|+.+.. .+...++... ++++.
T Consensus 204 ~~~~l~~~~~~A~~~g~~v~~H~~~~-----------~~i~~~~~~g--~---~~i~H~~~~~-~~~i~~~~~~-g~~v~ 265 (408)
T 3be7_A 204 TLEEMKAIVDEAHNHGMKVAAHAHGL-----------IGIKAAIKAG--V---DSVEHASFID-DETIDMAIKN-NTVLS 265 (408)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECSH-----------HHHHHHHHHT--C---SEEEECTTCC-HHHHHHHHHT-TCEEE
T ss_pred CHHHHHHHHHHHHHCCCEEEEEeCCH-----------HHHHHHHHcC--C---CEEEECCCCC-HHHHHHHHHC-CCEEe
Confidence 34456778889999999999998521 1244444422 1 2467875433 3333333332 34443
Q ss_pred ccccC------C----CCcH----H--HH----HHHHHHHHHHCCCCcEEEecCCCCCcccchhhHHHHHHHHHHHHhhh
Q 003194 292 FGLAI------P----KLSV----Q--GM----ISSIKELLELAPTKKVMFSTDAYASPETYFLGAKRAREVVFSVLRDT 351 (840)
Q Consensus 292 ~s~~~------~----~~~~----~--g~----~~~l~~~le~~~~~kilfgSD~~~~Pe~~~~~~~~~R~~l~~~l~~~ 351 (840)
+.... . ...+ . +. ...++.+++.+- ++++|||+.+.|.... ...++. +
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gv--~~~~gTD~~~~p~~~~--~~~~~~--------~ 333 (408)
T 3be7_A 266 MDIFVSDYILGEGAKAGIREESLNKERLVGKKQRENFMNAHRRGA--IITFGTDAGIFDHGDN--AKQFAY--------M 333 (408)
T ss_dssp CCCSTHHHHHTTTTTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC--CEECCCCBTTBCTTCG--GGHHHH--------H
T ss_pred eeecHHHHhhhhccccCCCHHHHHHHHHHHHHHHHHHHHHHHCCC--EEEEECCCCCCCCchH--HHHHHH--------H
Confidence 22110 0 0011 0 00 123455555442 6889999765553221 111211 1
Q ss_pred hcCCCCChhHHHHHHHHHHHHhHHHHhcCC
Q 003194 352 CIDEDLSVGEAIEVAKDIFALNAAQFYKIN 381 (840)
Q Consensus 352 v~~g~l~~~ea~~~~~~Il~~NA~rly~l~ 381 (840)
++. .++.. .+-+.+-.|++++|+++
T Consensus 334 ~~~-gls~~----~al~~~T~n~A~~lgl~ 358 (408)
T 3be7_A 334 VEW-GMTPL----EAIQASTIKTATLFGIE 358 (408)
T ss_dssp HHT-TCCHH----HHHHTTTHHHHHHHTCS
T ss_pred HHc-CCCHH----HHHHHHHHHHHHHhCCC
Confidence 222 57764 34445668899999987
No 84
>3nzt_A Glutamate--cysteine ligase; structural genomics, center for structural genomics of infec diseases, csgid, alpha and beta proteins; HET: AMP; 2.00A {Francisella tularensis subsp}
Probab=46.85 E-value=18 Score=41.06 Aligned_cols=143 Identities=14% Similarity=0.057 Sum_probs=87.0
Q ss_pred ceeeeeeeeEEEEEeecccCCCCCcccCCCCCcccCCccccchHHHHHHHHHHHhCCCceeeeccCCCCCceEEecCcc-
Q 003194 523 LVLNAGFEIEFYLLKSVLREGKEEWVPIDFTPYCSTAAYDAVSPVFQEVLADLHSLNISVEQLHAEAGKGQFEIALGHT- 601 (840)
Q Consensus 523 ~~~~~g~E~EF~l~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~l~~~Gi~ve~~h~E~gpGQ~Ei~l~~~- 601 (840)
..+.+|+|-|+..+++ +|.-...|+.. ..... ..-..+.+|..-.|.|+..+++
T Consensus 31 ~~~~~GIE~E~lRVd~---~G~La~tphP~--~LGs~--------------------lthp~IttDfsEsqlE~iTp~~~ 85 (525)
T 3nzt_A 31 INNLRGIERETLRVTD---CGNLATSNHPD--GLGHK--------------------LTNNSITVDFSENLLELITKPHD 85 (525)
T ss_dssp CCCEEEEEEEEEEEET---TSCBCCSCSCG--GGCCT--------------------TTCSSEEESSBTTEEEEECCCBS
T ss_pred CCCCcceEeeeeEECC---CCCcCCCCChH--hhccC--------------------ccCCCCCchhhhhHhhhcCCCCC
Confidence 4689999999999986 23211112110 00000 0013566788999999999997
Q ss_pred hHHHHHhHHHHHHHHHHHHH-HHcCCeeEecccccCC--C----C--------------------------Ccccccccc
Q 003194 602 VAAKAADNLIFTREVLRAVA-RKHGLLATFVPKFALD--D----I--------------------------GSGSHVHLS 648 (840)
Q Consensus 602 ~~l~aaD~~~~~r~~ik~vA-~~~Gl~ATFmpKP~~~--~----~--------------------------GsG~H~H~S 648 (840)
+.-++-+.+-..+.++.+.+ ....+-+.=||-|..+ . - =||.|+|+|
T Consensus 86 s~~ea~~~L~~l~~~v~~~l~~~E~LWp~SmPl~~~~~~ipiA~yg~sn~g~~k~~YR~gL~~rYG~~~q~IsGiH~Nfs 165 (525)
T 3nzt_A 86 SIDKAIGELYQLSAFTLDNMHSDEIILNTSMPLSANDNDIQEADFGSSNSGRMKRVYRKGLSARYGKIMQIISGIHYNFS 165 (525)
T ss_dssp SHHHHHHHHHHHHHHHHHHSCTTEEECCSSSCCSCCGGGCCBCCCCSSHHHHHHHHHHHHHHHHHCSGGGGCCBEEEEEE
T ss_pred CHHHHHHHHHHHHHHHHHhhCCCCeEEeecCCCCCCcCCCceeeccccccCcchHHHHHHHHHHhchhheeeeeEEEEec
Confidence 57778899999999888886 5566666668632111 0 1 158999999
Q ss_pred cccCC-CcccccCCCCCcCCCcHHHHHHHHHHHHhHHhhhhhcCCCC
Q 003194 649 LWQNG-ENVFMASDSSSKHGMSSVGEKFMAGVLHHLSSILAFTAPVP 694 (840)
Q Consensus 649 l~~~g-~n~f~~~d~~~~~~lS~~~~~fiaGlL~h~~al~a~~~Pt~ 694 (840)
+-++- +.++..... .-|...-..+-+.+.+.+-|+.++..++
T Consensus 166 l~~~~~~~l~~~~~~----~~s~~Y~~Lirnf~Ry~Wll~YLfGASP 208 (525)
T 3nzt_A 166 FDKDLISNIATNKQV----SISDIYFDVLNNYFEFMWLLPYLFGASP 208 (525)
T ss_dssp CCHHHHHHHHHHHTC----CHHHHHHHHHHHHHHHTTHHHHHHCCBC
T ss_pred CCHHHHHHHHHhccc----chhHHHHHHHHHHHHHHHHHHHHhhCCc
Confidence 94320 011100000 0345555667778888888887776554
No 85
>3dc8_A Dihydropyrimidinase; TIM-barrel, hydrolase; HET: KCX; 1.85A {Sinorhizobium meliloti}
Probab=46.49 E-value=1e+02 Score=34.43 Aligned_cols=157 Identities=18% Similarity=0.144 Sum_probs=80.3
Q ss_pred hHHHHHHHHHHhhCCCcEEEeeCCCC--------------CCCC-cCCcChh-----hhH---HHHhhcCCCCcEEEEeC
Q 003194 213 DYIFISSLEVAQFLDLPLQIHTGFGD--------------KDLD-LRLSNPL-----HLR---AILEDKRFSKCRFVLLH 269 (840)
Q Consensus 213 d~~l~~l~e~~~e~glPvq~H~G~gd--------------~~~~-~~~~~P~-----~L~---~l~~~~~~P~l~~VllH 269 (840)
+..+..+++.++++|+++++|.-..+ .+.. ...+.|. .+. .+++ .-+.++.+.|
T Consensus 160 ~~~l~~~~~~a~~~g~~v~~HaE~~~~i~~~~~~~~~~g~~~~~~~~~~rP~~~E~~av~r~i~la~---~~g~~lhi~H 236 (490)
T 3dc8_A 160 DDEMFSSFQRCAALGALPLVHAENGDVVAQLQAKLLAEGNSGPEAHAYSRPAEVEGEAANRAIMIAD---MAGCPVYIVH 236 (490)
T ss_dssp HHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHHHHHHTTCCSHHHHHHTSCHHHHHHHHHHHHHHHH---HHTCCEEESS
T ss_pred HHHHHHHHHHHHhcCCEEEEecCChHHHHHHHHHHHhcCCCCccccccCCCHHHHHHHHHHHHHHHH---HhCCcEEEEe
Confidence 33456677888899999999964210 0000 0112232 111 2222 2368899999
Q ss_pred CCCchHHHHHHHHHhC-CEeEecccccC----------------------CCCcHHHHHHHHHHHHHHCCCCcEEEecCC
Q 003194 270 ASYPFSKEASYLAYVY-PQVYLDFGLAI----------------------PKLSVQGMISSIKELLELAPTKKVMFSTDA 326 (840)
Q Consensus 270 ~g~p~~~e~~~la~~~-pNVyld~s~~~----------------------~~~~~~g~~~~l~~~le~~~~~kilfgSD~ 326 (840)
.+..-..++...+... -+|+.++.... |-+....-+..|.+.+..+..+ +++||.
T Consensus 237 vSt~~~~~li~~ak~~G~~Vt~e~~ph~l~l~~~~~~~~~~~~~~~~~~~Pplr~~~d~~aL~~~l~~G~id--~i~sDh 314 (490)
T 3dc8_A 237 TSCEQAHEAIRRARAKGMRVFGEPLIQHLTLDETEYFDKDWDHAARRVMSPPFRNKLHQDSLWAGLASGSLQ--VVATDH 314 (490)
T ss_dssp CCSHHHHHHHHHHHHTTCCEEECCBHHHHHCCGGGGGCSCHHHHHHTCCSSCCCCGGGHHHHHHHHHHTSSC--CCBCCB
T ss_pred CCCHHHHHHHHHHHHCCCeEEEEEchHHheeCHHHhcCcCcccCCceEECCCCCChHHHHHHHHHHhcCCce--EEECCC
Confidence 8755444444444332 35666654310 0010011123455555544333 589995
Q ss_pred CCCcccchhhHHH---------------HHHHHHHHHhhhhcCCCCChhHHHHHHHHHHHHhHHHHhcCCC
Q 003194 327 YASPETYFLGAKR---------------AREVVFSVLRDTCIDEDLSVGEAIEVAKDIFALNAAQFYKINL 382 (840)
Q Consensus 327 ~~~Pe~~~~~~~~---------------~R~~l~~~l~~~v~~g~l~~~ea~~~~~~Il~~NA~rly~l~~ 382 (840)
-++.. ..+. ....+..++...+..+.++.. .+-..+..|++++|++..
T Consensus 315 ~p~~~----~~K~~g~~~f~~~~~G~~gle~~l~~~~~~~v~~~~l~~~----~~~~~~t~~~A~~~gl~~ 377 (490)
T 3dc8_A 315 CAFTT----EQKRFGVGDFTRIPNGTGGLEDRMPMLWTYGVATGRITMN----EFVAVTSTNIAKILNIYP 377 (490)
T ss_dssp CCCCH----HHHGGGTTCGGGSCCCBCCTTTHHHHHHHHHTTTTSSCHH----HHHHHHTHHHHHHTTCTT
T ss_pred CCCCH----HHhhccCCChhhCCCChHHHHHHHHHHHHHHHHcCCCCHH----HHHHHHHHHHHHHhCCCC
Confidence 44331 0110 001233344455778889985 344556689999999953
No 86
>4dzh_A Amidohydrolase; adenosine deaminase, nysgrc, structural GENO YORK structural genomics research consortium; 1.55A {Xanthomonas campestris PV}
Probab=45.12 E-value=87 Score=34.58 Aligned_cols=155 Identities=16% Similarity=0.106 Sum_probs=71.9
Q ss_pred HHHHHHHHHHhhCCCcEEEeeCCCCCCC----CcCCcChhhhHHHHhhcCCCCcEEEEeCCCCchHHHHHHHHHhCCEeE
Q 003194 214 YIFISSLEVAQFLDLPLQIHTGFGDKDL----DLRLSNPLHLRAILEDKRFSKCRFVLLHASYPFSKEASYLAYVYPQVY 289 (840)
Q Consensus 214 ~~l~~l~e~~~e~glPvq~H~G~gd~~~----~~~~~~P~~L~~l~~~~~~P~l~~VllH~g~p~~~e~~~la~~~pNVy 289 (840)
..+..+++.|.++|+++.+|..-+.... ......| +..+.+. ...+-++++.|+.+--..++..++..--.+-
T Consensus 209 ~~l~~~~~~A~~~g~~v~iH~~e~~~~~~~~~~~~g~~~--i~~~~~~-g~~~~~~~~~H~~~l~~~~i~~l~~~g~~v~ 285 (472)
T 4dzh_A 209 ANFERVRMLADQLDMPVHLHTHETAQEVADSVAQYGQRP--LARLDRL-GLVNDRLIAVHMTQLTEAEIHLCAERGVSVV 285 (472)
T ss_dssp HHHHHHHHHHHHHTCCEEEEESCCHHHHHHHHHHHSSCH--HHHHHHH-TCCSTTEEEEECCSCCHHHHHHHHHHTCEEE
T ss_pred HHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCCH--HHHHHHc-CCCCCCeEEEeccCCCHHHHHHHHHcCCEEE
Confidence 3466778889999999999986421000 0000112 2222222 2334567888986544444555554322222
Q ss_pred ecccccCCCCcHHHHHHHHHHHHHHCCCCcEEEecCCCCC-cccchhhHHHHHHHHHHHHhhh--hcCCCCChhHHHHHH
Q 003194 290 LDFGLAIPKLSVQGMISSIKELLELAPTKKVMFSTDAYAS-PETYFLGAKRAREVVFSVLRDT--CIDEDLSVGEAIEVA 366 (840)
Q Consensus 290 ld~s~~~~~~~~~g~~~~l~~~le~~~~~kilfgSD~~~~-Pe~~~~~~~~~R~~l~~~l~~~--v~~g~l~~~ea~~~~ 366 (840)
......... ..|. ..++.+++.+ -++.+|||+... +... ....++... .+... -....++.. +..
T Consensus 286 ~~p~s~~~~--~~~~-~~~~~~~~~G--v~v~lgtD~~~~~~~~~--~~~~~~~a~--~~~~~~~~~~~~l~~~---~al 353 (472)
T 4dzh_A 286 HCPESNLKL--ASGF-CPACALQRAS--VNLAIGTDGCASNNDLD--MFSENRTAA--ILAKAVANDATALDAA---TTL 353 (472)
T ss_dssp ECHHHHHHT--TCCC-CCHHHHHHTT--CEEEECCCCTTSSCCCC--HHHHHHHHH--HHHHHHHTCTTSSCHH---HHH
T ss_pred EChHHHHhc--CCCC-ccHHHHHHCC--CCEEEECCCCcCCCCCC--HHHHHHHHH--HHhhhhcCCCCcCCHH---HHH
Confidence 222110000 0010 1234445433 278899996532 1111 111122111 11111 122357764 344
Q ss_pred HHHHHHhHHHHhcCCCCc
Q 003194 367 KDIFALNAAQFYKINLGV 384 (840)
Q Consensus 367 ~~Il~~NA~rly~l~~~~ 384 (840)
+. +-.|+++.++++...
T Consensus 354 ~~-~T~~~A~~lgl~~~~ 370 (472)
T 4dzh_A 354 RA-ATLGGARALGFGDRI 370 (472)
T ss_dssp HH-HTHHHHHHTTCTTTS
T ss_pred HH-HHHHHHHHcCCCCCC
Confidence 44 446888999986543
No 87
>3lnp_A Amidohydrolase family protein OLEI01672_1_465; TIM barrel, beta-fold, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.10A {Oleispira antarctica}
Probab=44.89 E-value=95 Score=34.02 Aligned_cols=155 Identities=15% Similarity=0.089 Sum_probs=72.0
Q ss_pred HHHHHHHHHHhhCCCcEEEeeCCCCCCCC----cCCcChhhhHHHHhhcCCCCcEEEEeCCCCchHHHHHHHHHhCCEeE
Q 003194 214 YIFISSLEVAQFLDLPLQIHTGFGDKDLD----LRLSNPLHLRAILEDKRFSKCRFVLLHASYPFSKEASYLAYVYPQVY 289 (840)
Q Consensus 214 ~~l~~l~e~~~e~glPvq~H~G~gd~~~~----~~~~~P~~L~~l~~~~~~P~l~~VllH~g~p~~~e~~~la~~~pNVy 289 (840)
..+..+++.|.++|+++.+|..-...... ..-..+ +..+.+. ...+-+.++.|+.+--..++..++.. +++
T Consensus 227 ~~l~~~~~~A~~~g~~v~~H~~e~~~~~~~~~~~~g~~~--i~~~~~~-g~l~~~~~~~H~~~~~~~~~~~l~~~--g~~ 301 (468)
T 3lnp_A 227 EPLKEITMLSDQLDMPVQIHLHETDFEVSESLETFNKRP--TQRLADI-GFLNERVSCVHMTQVDDGDIKILQKT--GAS 301 (468)
T ss_dssp HHHHHHHHHHHHHTCCEEEEESCSHHHHHHHHHHHSSCH--HHHHHHT-TCCSTTEEEEECCSCCHHHHHHHHHH--CCE
T ss_pred HHHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHhCCCH--HHHHHHc-CCCCCCeEEEeccCCCHHHHHHHHhc--CCE
Confidence 34667788999999999999964210000 000111 2222221 23456778899865444444555543 233
Q ss_pred ecccccCCCCcHHHHHHHHHHHHHHCCCCcEEEecCCCCCcccchhhHHHHHHHHHHHHhhhh--cCCCCChhHHHHHHH
Q 003194 290 LDFGLAIPKLSVQGMISSIKELLELAPTKKVMFSTDAYASPETYFLGAKRAREVVFSVLRDTC--IDEDLSVGEAIEVAK 367 (840)
Q Consensus 290 ld~s~~~~~~~~~g~~~~l~~~le~~~~~kilfgSD~~~~Pe~~~~~~~~~R~~l~~~l~~~v--~~g~l~~~ea~~~~~ 367 (840)
+...-..+.....+. ..++.+++.+ -++.+|||+...+.. ......++.. ..+.... ....++.. +..
T Consensus 302 v~~~p~s~~~~~~~~-~~~~~~~~~G--v~v~lgtD~~~~~~~-~~~~~~~~~~--~~~~~~~~~~~~~l~~~---~al- 371 (468)
T 3lnp_A 302 IIHCPESNLKLASGF-CPIAKLSAAN--IPLAIGTDGAASNND-LDMFSETKTA--ALLAKGVSQDASAIPAI---EAL- 371 (468)
T ss_dssp EEECHHHHHHTTCCC-CCHHHHHHTT--CCEEECCCCTTSSCC-CCHHHHHHHH--HHHHHHHHTCTTSSCHH---HHH-
T ss_pred EEEChhhhhhcCCCC-CCHHHHHHCC--CeEEEECCCCcCCCC-CCHHHHHHHH--HHHhhhccCCCCcCCHH---HHH-
Confidence 322110000000010 1234455543 278899996543110 0011112211 1111111 23457764 334
Q ss_pred HHHHHhHHHHhcCCCC
Q 003194 368 DIFALNAAQFYKINLG 383 (840)
Q Consensus 368 ~Il~~NA~rly~l~~~ 383 (840)
+.+-.|++++++++..
T Consensus 372 ~~~T~~~A~~lg~~~~ 387 (468)
T 3lnp_A 372 TMATLGGARALGIDDI 387 (468)
T ss_dssp HHHTHHHHHHTTCTTT
T ss_pred HHHHHHHHHHhCCCCC
Confidence 4445688999998653
No 88
>2r8c_A Putative amidohydrolase; unknown source, sargasso SEA, structural genomics, protein structure initiative, PSI; 2.31A {Unidentified} PDB: 3mkv_A*
Probab=44.65 E-value=3.1e+02 Score=29.27 Aligned_cols=25 Identities=12% Similarity=-0.149 Sum_probs=20.8
Q ss_pred hhhHHHHHHHHHHhhCCCcEEEeeC
Q 003194 211 LIDYIFISSLEVAQFLDLPLQIHTG 235 (840)
Q Consensus 211 l~d~~l~~l~e~~~e~glPvq~H~G 235 (840)
+....+..+.+.|.++|++|.+|..
T Consensus 212 ~~~e~l~~~~~~A~~~g~~v~~H~~ 236 (426)
T 2r8c_A 212 YSEDEIRAIVAEAQGRGTYVLAHAY 236 (426)
T ss_dssp SCHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred CCHHHHHHHHHHHHHcCCEEEEEeC
Confidence 4455678889999999999999986
No 89
>4dyk_A Amidohydrolase; adenosine deaminase, nysgrc, structural GENO PSI-biology, NEW YORK structural genomics research consorti hydrolase; 2.00A {Pseudomonas aeruginosa}
Probab=44.01 E-value=1.1e+02 Score=33.14 Aligned_cols=157 Identities=17% Similarity=0.134 Sum_probs=73.3
Q ss_pred hHHHHHHHHHHhhCCCcEEEeeCCCCCCCC----cCCcChhhhHHHHhhcCCCCcEEEEeCCCCchHHHHHHHHHhCCEe
Q 003194 213 DYIFISSLEVAQFLDLPLQIHTGFGDKDLD----LRLSNPLHLRAILEDKRFSKCRFVLLHASYPFSKEASYLAYVYPQV 288 (840)
Q Consensus 213 d~~l~~l~e~~~e~glPvq~H~G~gd~~~~----~~~~~P~~L~~l~~~~~~P~l~~VllH~g~p~~~e~~~la~~~pNV 288 (840)
...+..+++.|.++|+++.+|..-...... .....+ +..+.+. ...+-+.++.|+.+.-..+...++..--.+
T Consensus 201 ~~~l~~~~~~A~~~g~~v~~H~~e~~~~~~~~~~~~g~~~--i~~~~~~-g~~~~~~~~~H~~~~~~~~~~~l~~~g~~v 277 (451)
T 4dyk_A 201 DDKLEQILVLTEELDASIQMHVHETAFEVEQAMERNGERP--LARLHRL-GLLGPRFQAVHMTQVDNDDLAMLVETNSSV 277 (451)
T ss_dssp HHHHHHHHHHHHHHTCCEEEEESCCHHHHHHHHHHHSSCH--HHHHHHT-TCCSTTEEEEECCCCCHHHHHHHHHHTCEE
T ss_pred HHHHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHhCCCH--HHHHHHC-CCCCCCeEEEECCCCCHHHHHHHHHcCCEE
Confidence 345677889999999999999964310000 000111 2222221 234567788998654444555555432222
Q ss_pred EecccccCCCCcHHHHHHHHHHHHHHCCCCcEEEecCCCCCcccchhhHHHHHHHHHHHHhhhh--cCCCCChhHHHHHH
Q 003194 289 YLDFGLAIPKLSVQGMISSIKELLELAPTKKVMFSTDAYASPETYFLGAKRAREVVFSVLRDTC--IDEDLSVGEAIEVA 366 (840)
Q Consensus 289 yld~s~~~~~~~~~g~~~~l~~~le~~~~~kilfgSD~~~~Pe~~~~~~~~~R~~l~~~l~~~v--~~g~l~~~ea~~~~ 366 (840)
-.....-... ..+. ..++.+++.+. ++.+|||+...+. .......++... .+.... ....++.. +..
T Consensus 278 ~~~p~s~~~~--~~~~-~~~~~~~~~Gv--~v~lgtD~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~~~~~~---~al 346 (451)
T 4dyk_A 278 IHCPESNLKL--ASGF-CPVEKLWQAGV--NVAIGTDGAASNN-DLDLLGETRTAA--LLAKAVYGQATALDAH---RAL 346 (451)
T ss_dssp EECHHHHHHT--TCCC-CCHHHHHHHTC--CEEECCCCGGGSS-CCCHHHHHHHHH--HHHHHHHTCTTSSCHH---HHH
T ss_pred EEChhhhhhc--cCCc-ccHHHHHhCCC--eEEEECCCCccCC-CCCHHHHHHHHH--HHhhhhcCCCCCCCHH---HHH
Confidence 2221110000 0010 12344555442 7889999543211 001111222111 111111 23457764 233
Q ss_pred HHHHHHhHHHHhcCCCCc
Q 003194 367 KDIFALNAAQFYKINLGV 384 (840)
Q Consensus 367 ~~Il~~NA~rly~l~~~~ 384 (840)
+.+-.|+++.++++...
T Consensus 347 -~~~T~~~A~~lg~~~~~ 363 (451)
T 4dyk_A 347 -RMATLNGARALGLERLI 363 (451)
T ss_dssp -HHHTHHHHHHHTCTTTS
T ss_pred -HHHHHHHHHHcCCCCCC
Confidence 44557888999986543
No 90
>2fty_A Dihydropyrimidinase; alpha/beta barrel, beta-sandwich, hydrolase; HET: KCX; 2.40A {Lachancea kluyveri} SCOP: b.92.1.3 c.1.9.6 PDB: 2fvk_A* 2fvm_A*
Probab=41.54 E-value=76 Score=36.31 Aligned_cols=33 Identities=18% Similarity=0.159 Sum_probs=23.0
Q ss_pred HHHhhhhcCCCC-ChhHHHHHHHHHHHHhHHHHhcCCC
Q 003194 346 SVLRDTCIDEDL-SVGEAIEVAKDIFALNAAQFYKINL 382 (840)
Q Consensus 346 ~~l~~~v~~g~l-~~~ea~~~~~~Il~~NA~rly~l~~ 382 (840)
.++...|..+.+ +.. .+-..+-.|++++|++..
T Consensus 402 ~ll~~~v~~~~l~~~~----~~~~~~t~~~A~~lgl~~ 435 (559)
T 2fty_A 402 LLYDYGYLRGNLTSMM----KLVEIQCTNPAKVYGMYP 435 (559)
T ss_dssp HHHHHTTTTTSSSCHH----HHHHHHTHHHHHHTTCTT
T ss_pred HHHHHHHHcCCCCCHH----HHHHHHhHHHHHHhCCCC
Confidence 345566777888 874 344556688999999843
No 91
>1xrt_A Dihydroorotase, dhoase; amidohydrolase, metalloenzyme, pyrimidine; 1.61A {Aquifex aeolicus} SCOP: b.92.1.3 c.1.9.6 PDB: 1xrf_A 3d6n_A*
Probab=35.65 E-value=1.6e+02 Score=32.32 Aligned_cols=25 Identities=24% Similarity=0.260 Sum_probs=20.2
Q ss_pred hhHHHHHHHHHHhhCCCcEEEeeCC
Q 003194 212 IDYIFISSLEVAQFLDLPLQIHTGF 236 (840)
Q Consensus 212 ~d~~l~~l~e~~~e~glPvq~H~G~ 236 (840)
....+..+++.+.++|+|+.+|..-
T Consensus 204 ~~e~l~~~~~~A~~~g~~v~~H~~~ 228 (467)
T 1xrt_A 204 DSSVMRKALELASQLGVPIMDHCED 228 (467)
T ss_dssp CHHHHHHHHHHHHHHTCEEEECCCG
T ss_pred CHHHHHHHHHHHHhcCCEEEEECCC
Confidence 4456777888999999999999853
No 92
>2ood_A BLR3880 protein; PSI-II, PSI-2, guanine deaminase, guanine, structural genomics, protein structure initiative; HET: GUN; 2.62A {Bradyrhizobium japonicum} SCOP: b.92.1.4 c.1.9.9
Probab=33.19 E-value=1.9e+02 Score=31.89 Aligned_cols=26 Identities=8% Similarity=-0.060 Sum_probs=20.6
Q ss_pred hhhHHHHHHHHHHhhC-CCcEEEeeCC
Q 003194 211 LIDYIFISSLEVAQFL-DLPLQIHTGF 236 (840)
Q Consensus 211 l~d~~l~~l~e~~~e~-glPvq~H~G~ 236 (840)
+....+..+++.+.++ |+++.+|+.-
T Consensus 211 ~~~e~l~~~~~~a~~~~g~~v~~H~~e 237 (475)
T 2ood_A 211 ASPELLKACQRLKHEHPDCWVNTHISE 237 (475)
T ss_dssp CCHHHHHHHHHHHHHCTTSEEEEECSC
T ss_pred CCHHHHHHHHHHHHhCCCCcEEEeeCC
Confidence 3344667788999999 9999999863
No 93
>3ooq_A Amidohydrolase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, H PSI-2; 2.06A {Thermotoga maritima}
Probab=32.83 E-value=1.6e+02 Score=31.53 Aligned_cols=135 Identities=17% Similarity=0.139 Sum_probs=66.3
Q ss_pred HHHHhhCCCcEEEeeCCCCCCCCcCCcChhhhHHHHhhcCCCCcEEEEeCCCCchHHHHHHHHHhCCEeEecccccCCCC
Q 003194 220 LEVAQFLDLPLQIHTGFGDKDLDLRLSNPLHLRAILEDKRFSKCRFVLLHASYPFSKEASYLAYVYPQVYLDFGLAIPKL 299 (840)
Q Consensus 220 ~e~~~e~glPvq~H~G~gd~~~~~~~~~P~~L~~l~~~~~~P~l~~VllH~g~p~~~e~~~la~~~pNVyld~s~~~~~~ 299 (840)
+..+.+.|+|+.+|+...+ .....-.+++ ++ ++++.+.|+..-+. .+..++..--.|-+.....+...
T Consensus 213 l~~~~~~~~~v~iHa~~~~--------~i~~~~~~~~--~~-g~~~~i~H~~~~~~-~~~~l~~~gv~v~~~P~~~~~~~ 280 (396)
T 3ooq_A 213 GEMVLRKKIPARMHAHRAD--------DILTAIRIAE--EF-GFNLVIEHGTEAYK-ISKVLAEKKIPVVVGPLLTFRTK 280 (396)
T ss_dssp HHHHHTTSSCEEEEECSHH--------HHHHHHHHHH--HH-TCCEEEEECTTGGG-GHHHHHHHTCCEEECCCSSCCCS
T ss_pred HHHHHcCCCcEEEEECchh--------HHHHHHHHHH--Hc-CCCEEEecCchHHH-HHHHHHHCCCCEEECcccccccc
Confidence 3344588999999986321 1112222333 22 35678889854332 33444443222222222211111
Q ss_pred c---HHHHHHHHHHHHHHCCCCcEEEecCCCCCcccchhhHHHHHHHHHHHHhhhhcCCCCChhHHHHHHHHHHHHhHHH
Q 003194 300 S---VQGMISSIKELLELAPTKKVMFSTDAYASPETYFLGAKRAREVVFSVLRDTCIDEDLSVGEAIEVAKDIFALNAAQ 376 (840)
Q Consensus 300 ~---~~g~~~~l~~~le~~~~~kilfgSD~~~~Pe~~~~~~~~~R~~l~~~l~~~v~~g~l~~~ea~~~~~~Il~~NA~r 376 (840)
. ..+ ...++.+++.+ -++.+|||++..|... +...+ .+ .+ +..++.. .+-+..-.|+++
T Consensus 281 ~~~~~~~-~~~~~~l~~~G--v~v~lgtD~~~~~~~~------l~~~~-~~---~~-~~gl~~~----~al~~~T~n~A~ 342 (396)
T 3ooq_A 281 LELKDLT-METIAKLLKDG--VLIALMCDHPVIPLEF------ATVQA-AT---AM-RYGAKEE----DLLKILTVNPAK 342 (396)
T ss_dssp GGGTTCC-TTHHHHHHHTT--CCEEECCTTTTSCGGG------HHHHH-HH---GG-GGTCCHH----HHHHTTTHHHHH
T ss_pred hhHHhhh-hHHHHHHHHCC--CEEEEEcCCCccCccH------HHHHH-HH---HH-HcCCCHH----HHHHHHHHHHHH
Confidence 0 001 12455555543 4788999976555321 11111 11 11 2356763 445566689999
Q ss_pred HhcCCCCc
Q 003194 377 FYKINLGV 384 (840)
Q Consensus 377 ly~l~~~~ 384 (840)
+++++...
T Consensus 343 ~lg~~~~~ 350 (396)
T 3ooq_A 343 ILGLEDRI 350 (396)
T ss_dssp HTTCTTTS
T ss_pred HhCCCCCe
Confidence 99997543
No 94
>4gxw_A Adenosine deaminase; amidohydrolase, COG1816, EFI, structural genomics, hydrolase; 1.30A {Burkholderia ambifaria}
Probab=30.31 E-value=55 Score=35.68 Aligned_cols=84 Identities=13% Similarity=0.093 Sum_probs=48.9
Q ss_pred cHHHHHHHHHHHHHhhcccc-ccceeeecccCCCCCCCCCCHHHHHHHHHHHHhCCC----CCcCCchhh--hhHHHHHH
Q 003194 147 TLDVFIETFLKQLRSAANKI-VGLKSIAAYRSGLEINPHVTKKDAEEGLAEDLRSGK----PVRITNKSL--IDYIFISS 219 (840)
Q Consensus 147 ~~~~~~~al~~~l~~~~~~~-vgfks~~~y~~Gl~~~p~~~~~ea~~~~~r~l~~~~----~~~~~~~~l--~d~~l~~l 219 (840)
+++++++++.+.++.....+ +..+-|.|.... .+++++.+.++.++.... +..+...+. .-..+.++
T Consensus 129 ~~~~vv~av~~g~~~a~~~~gi~~rlI~~~~R~------~~~e~a~~~~~~a~~~~~~~VvG~dL~g~E~~~p~~~f~~~ 202 (380)
T 4gxw_A 129 PYADAQAAIVTGMRDAARDFGIGARLIPSIDRE------QDPDEAVAIVDWMKANRADEVAGIGIDYRENDRPPELFWKA 202 (380)
T ss_dssp CHHHHHHHHHHHHHHHHHHHCCEEEEEEEEETT------SCHHHHHHHHHHHHHTCCTTBCEEEEESCCTTCCGGGGHHH
T ss_pred CHHHHHHHHHHHHHHHHHhcCCcEEEEEeecCC------CCHHHHHHHHHHHHHhCCCCEEEEeecCCCCCCCHHHHHHH
Confidence 46777777777666542211 345556665332 256777777666655321 111111110 01136788
Q ss_pred HHHHhhCCCcEEEeeCC
Q 003194 220 LEVAQFLDLPLQIHTGF 236 (840)
Q Consensus 220 ~e~~~e~glPvq~H~G~ 236 (840)
++.|.+.|+++.+|.|-
T Consensus 203 f~~ar~~Gl~~t~HAGE 219 (380)
T 4gxw_A 203 YRDARAAGFRTTAHAGE 219 (380)
T ss_dssp HHHHHHTTCEEEEEESC
T ss_pred HHHHHHcCCCeeeeccc
Confidence 99999999999999995
No 95
>1rk6_A D-aminoacylase; TIM barrel, beta barrel, insertion, hydrolase; 1.43A {Alcaligenes faecalis} SCOP: b.92.1.6 b.92.1.6 c.1.9.11 PDB: 1rjp_A 1v51_A 1rjq_A 1rjr_A 1rk5_A 1v4y_A 1m7j_A
Probab=28.48 E-value=1.4e+02 Score=33.05 Aligned_cols=56 Identities=11% Similarity=-0.048 Sum_probs=31.6
Q ss_pred cEEEecCCCCCcccchhhHHHHHHHHHHHHhhhhc-CCCCChhHHHHHHHHHHHHhHHHHhcCC
Q 003194 319 KVMFSTDAYASPETYFLGAKRAREVVFSVLRDTCI-DEDLSVGEAIEVAKDIFALNAAQFYKIN 381 (840)
Q Consensus 319 kilfgSD~~~~Pe~~~~~~~~~R~~l~~~l~~~v~-~g~l~~~ea~~~~~~Il~~NA~rly~l~ 381 (840)
++++|||+..+......+. -..+.+.+..++. .+.++.. +.. +.+-.|++++|+++
T Consensus 373 ~~~iGTD~~~~~~~~~~~~---~~~~~~~l~~~v~~~~~l~~~---~~l-~~~T~~~A~~lgl~ 429 (496)
T 1rk6_A 373 PTMIGSDGLPHDERPHPRL---WGTFPRVLGHYSRDLGLFPLE---TAV-WKMTGLTAAKFGLA 429 (496)
T ss_dssp TEEECCCCCTTCSSCCTHH---HHHHHHHHCCCCCCTCSSCHH---HHH-HTTTHHHHHHHTCT
T ss_pred CEEEecCCCCCCCCCCchh---hccHHHHHHHHHhhcCCCCHH---HHH-HHHHHHHHHHhCCC
Confidence 7899999743211001111 1134455566664 5678874 334 44457788899985
No 96
>3h4u_A Amidohydrolase; signature of Zn ligands, structural genomics, NYSGXRC, target 9236E, PSI-2, protein structure initiative; 2.20A {Unidentified} PDB: 3hpa_A
Probab=27.84 E-value=1.2e+02 Score=33.26 Aligned_cols=154 Identities=14% Similarity=0.077 Sum_probs=72.4
Q ss_pred hHHHHHHHHHHhhCCCcEEEeeCCCCCCC----CcCCcChhhhHHHHhhcCCCCcEEEEeCCCCchHHHHHHHHHhCCEe
Q 003194 213 DYIFISSLEVAQFLDLPLQIHTGFGDKDL----DLRLSNPLHLRAILEDKRFSKCRFVLLHASYPFSKEASYLAYVYPQV 288 (840)
Q Consensus 213 d~~l~~l~e~~~e~glPvq~H~G~gd~~~----~~~~~~P~~L~~l~~~~~~P~l~~VllH~g~p~~~e~~~la~~~pNV 288 (840)
+..+..+++.|.++|+++.+|..-..... +..-..| +..+.+. .+.+.+.++.|+.+--..++..++..--.|
T Consensus 239 ~e~l~~~~~~A~~~g~~v~~H~~e~~~~~~~~~~~~g~~~--~~~~~~~-g~~~~~~~i~H~~~~~~~~~~~l~~~g~~v 315 (479)
T 3h4u_A 239 RDLMRDAAVLAREYGVSLHTHLAENVNDIAYSREKFGMTP--AEYAEDL-GWVGHDVWHAHCVQLDDAGIGLFARTGTGV 315 (479)
T ss_dssp HHHHHHHHHHHHHHTCEEEEEESCSHHHHHC-------CH--HHHHHHT-TCCSTTEEEEECTTCCHHHHHHHHHHTCEE
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCCHHHHHHHHHHcCCCH--HHHHHHc-CCCCCCeEEEEecCCCHHHHHHHHHcCCeE
Confidence 34567778999999999999996431100 0011122 2222222 234557888998655445555555432222
Q ss_pred EecccccCCCCcHHHHHHHHHHHHHHCCCCcEEEecCCCCCc-ccchhhHHHHHHHHHHHHhhhh-cCCCCChhHHHHHH
Q 003194 289 YLDFGLAIPKLSVQGMISSIKELLELAPTKKVMFSTDAYASP-ETYFLGAKRAREVVFSVLRDTC-IDEDLSVGEAIEVA 366 (840)
Q Consensus 289 yld~s~~~~~~~~~g~~~~l~~~le~~~~~kilfgSD~~~~P-e~~~~~~~~~R~~l~~~l~~~v-~~g~l~~~ea~~~~ 366 (840)
-........ . ..+. ..++.+++.+ -++.+|||+.... .... ...++... .+.... ....++.. +..
T Consensus 316 ~~~p~s~~~-l-~~~~-~~~~~~~~~G--v~v~lgtD~~~~~~~~~~--~~~~~~~~--~~~~~~~~~~~l~~~---~al 383 (479)
T 3h4u_A 316 AHCPCSNMR-L-ASGI-APVKKMRLAG--VPVGLGVDGSASNDGAQM--VAEVRQAL--LLQRVGFGPDAMTAR---EAL 383 (479)
T ss_dssp EECHHHHHH-T-TCCC-CCHHHHHHTT--CCEEECCCCTTSSCCCCH--HHHHHHHH--HHHHHHHCTTSCCHH---HHH
T ss_pred EEChhHhhh-c-CCCC-CCHHHHHHCC--CeEEEeCCCCccCCCcCH--HHHHHHHH--HHhcccCCCCCCCHH---HHH
Confidence 221111000 0 0010 1234455433 3788999965432 1111 11222211 111111 12337764 334
Q ss_pred HHHHHHhHHHHhcCCC
Q 003194 367 KDIFALNAAQFYKINL 382 (840)
Q Consensus 367 ~~Il~~NA~rly~l~~ 382 (840)
+..-.|++++++++.
T Consensus 384 -~~~T~~~A~~lg~~~ 398 (479)
T 3h4u_A 384 -EIATLGGAKVLNRDD 398 (479)
T ss_dssp -HHTTHHHHHHHTCSS
T ss_pred -HHHHHHHHHHhCCCC
Confidence 445578888999864
No 97
>3rys_A Adenosine deaminase 1; SGX, hydrolase; HET: ADE; 2.60A {Arthrobacter aurescens} SCOP: c.1.9.0
Probab=26.67 E-value=62 Score=34.66 Aligned_cols=158 Identities=18% Similarity=0.123 Sum_probs=80.8
Q ss_pred cHHHHHHHHHHHHHhhccc-cccceeeecccCCCCCCCCCCHHHHHHHHHHHHhCCC---CCcCCchh--hhhHHHHHHH
Q 003194 147 TLDVFIETFLKQLRSAANK-IVGLKSIAAYRSGLEINPHVTKKDAEEGLAEDLRSGK---PVRITNKS--LIDYIFISSL 220 (840)
Q Consensus 147 ~~~~~~~al~~~l~~~~~~-~vgfks~~~y~~Gl~~~p~~~~~ea~~~~~r~l~~~~---~~~~~~~~--l~d~~l~~l~ 220 (840)
+++++++++.+.++.+... -++.+-|.|....+ +++++.+.++.+++-.. +..+...+ ..-..+.+++
T Consensus 113 ~~~~~v~~v~~~~~~a~~~~gi~~~lI~~~~R~~------~~~~a~~~l~~a~~~~~~vvG~dL~g~E~~~~~~~~~~~~ 186 (343)
T 3rys_A 113 ALETCVNGVANALATSEEDFGVSTLLIAAFLRDM------SEDSALEVLDQLLAMHAPIAGIGLDSAEVGNPPSKFERLY 186 (343)
T ss_dssp CHHHHHHHHHHHHTTHHHHHSCEEEEEEEEETTS------CHHHHHHHHHHHHHTTCCCCEEEEESCCTTCCGGGGHHHH
T ss_pred CHHHHHHHHHHHHHHHhhcCceeEEEEEEeCCCC------CHHHHHHHHHHHHhCCCCEEEEecCCcccCCCHHHHHHHH
Confidence 4667777776666554221 13466666753222 46667777666665211 11111111 1112456889
Q ss_pred HHHhhCCCcEEEeeCCCCCCCCcCCcChhhhHHHHhhcCCCCcEEEEeCCCCch--HHHHHHHHHhC--------CEeEe
Q 003194 221 EVAQFLDLPLQIHTGFGDKDLDLRLSNPLHLRAILEDKRFSKCRFVLLHASYPF--SKEASYLAYVY--------PQVYL 290 (840)
Q Consensus 221 e~~~e~glPvq~H~G~gd~~~~~~~~~P~~L~~l~~~~~~P~l~~VllH~g~p~--~~e~~~la~~~--------pNVyl 290 (840)
+.|.+.|+++.+|.|-.. .|..+...+.. --++ + +.|+-.-. ...+..++..- .|+++
T Consensus 187 ~~A~~~gl~~~~HagE~~--------~~~~i~~al~~-lg~~-r--IgHgv~l~~d~~l~~~l~~~~i~le~cP~SN~~l 254 (343)
T 3rys_A 187 QRAAEAGLRRIAHAGEEG--------PASYITEALDV-LHVE-R--IDHGIRCMEDTDVVQRLVAEQVPLTVCPLSNVRL 254 (343)
T ss_dssp HHHHHTTCEEEEEESSSS--------CHHHHHHHHHT-SCCS-E--EEECGGGGGCHHHHHHHHHHTCCEEECHHHHHHT
T ss_pred HHHHHCCCeEEEeeCCCC--------CHHHHHHHHhc-CCcc-e--eeeeeeecCChHHHHHHHhcCCCeeEchhHHHHh
Confidence 999999999999998532 34455444431 1122 2 57873211 12334444322 15554
Q ss_pred cccccCCCCcHHHHHHHHHHHHHHCCCCcEEEecCCCCCcc
Q 003194 291 DFGLAIPKLSVQGMISSIKELLELAPTKKVMFSTDAYASPE 331 (840)
Q Consensus 291 d~s~~~~~~~~~g~~~~l~~~le~~~~~kilfgSD~~~~Pe 331 (840)
.. ++... ..-++.+++.+ =++..+||.+.+-.
T Consensus 255 ~~---~~~~~----~hPi~~ll~~G--v~V~l~TDdp~~~~ 286 (343)
T 3rys_A 255 RA---VDKLA----DHPLPEMLAIG--LNVCVNSDDPAYFG 286 (343)
T ss_dssp TS---SSCGG----GCSHHHHHHTT--CCEEECCBSTTTTT
T ss_pred CC---CCCcc----cchHHHHHHCC--CeEEEeCCCccccC
Confidence 33 11110 11345555543 47889999766543
No 98
>3g8r_A Probable spore coat polysaccharide biosynthesis P; structural genomics, protein structure initiative; 2.49A {Chromobacterium violaceum atcc 12472}
Probab=25.28 E-value=66 Score=34.58 Aligned_cols=68 Identities=16% Similarity=0.188 Sum_probs=40.9
Q ss_pred HHHHHHhhCCCcEEEeeCCCCCCCCcCCcChhhhHHHHhhcCCCCcEEEEeCC--CCchHH------HHHHHHHhCCEeE
Q 003194 218 SSLEVAQFLDLPLQIHTGFGDKDLDLRLSNPLHLRAILEDKRFSKCRFVLLHA--SYPFSK------EASYLAYVYPQVY 289 (840)
Q Consensus 218 ~l~e~~~e~glPvq~H~G~gd~~~~~~~~~P~~L~~l~~~~~~P~l~~VllH~--g~p~~~------e~~~la~~~pNVy 289 (840)
|+++.+++.|+||.+=+|... ...-...-+.+.. .- -+|+++|| +||-.+ ....|...||++-
T Consensus 126 pLL~~va~~gKPviLstGmst------l~Ei~~Ave~i~~--~g-~~viLlhC~s~YPt~~~~~nL~aI~~Lk~~fp~lp 196 (350)
T 3g8r_A 126 PLLERIARSDKPVVASTAGAR------REDIDKVVSFMLH--RG-KDLTIMHCVAEYPTPDDHLHLARIKTLRQQYAGVR 196 (350)
T ss_dssp HHHHHHHTSCSCEEEECTTCC------HHHHHHHHHHHHT--TT-CCEEEEECCCCSSCCGGGCCTTHHHHHHHHCTTSE
T ss_pred HHHHHHHhhCCcEEEECCCCC------HHHHHHHHHHHHH--cC-CCEEEEecCCCCCCCcccCCHHHHHHHHHHCCCCC
Confidence 456777899999999999641 1111111223332 22 26999998 677432 2345677788776
Q ss_pred ecccc
Q 003194 290 LDFGL 294 (840)
Q Consensus 290 ld~s~ 294 (840)
++.|.
T Consensus 197 VG~Sd 201 (350)
T 3g8r_A 197 IGYST 201 (350)
T ss_dssp EEEEE
T ss_pred EEcCC
Confidence 66653
No 99
>1gkp_A Hydantoinase; hydrolase, dihydropyrimidinase, cyclic amidase; HET: KCX EPE; 1.29A {Thermus SP} SCOP: b.92.1.3 c.1.9.6 PDB: 1gkq_A*
Probab=24.94 E-value=6.5e+02 Score=26.81 Aligned_cols=24 Identities=21% Similarity=0.169 Sum_probs=18.2
Q ss_pred hhHHHHHHHHHHhhCCCcEEEeeC
Q 003194 212 IDYIFISSLEVAQFLDLPLQIHTG 235 (840)
Q Consensus 212 ~d~~l~~l~e~~~e~glPvq~H~G 235 (840)
.+..+..+++.++++|+|+.+|..
T Consensus 161 ~~~~l~~~~~~a~~~~~~v~~H~e 184 (458)
T 1gkp_A 161 DDGEMYQTLRLAKELGVIVTAHCE 184 (458)
T ss_dssp CHHHHHHHHHHHHHHTCEEEEEES
T ss_pred CHHHHHHHHHHHHhcCCEEEEEcC
Confidence 344566777888888999999984
No 100
>1u8s_A Glycine cleavage system transcriptional repressor, putative; structural genomics, protein structure initiative (PSI), domain swapping; 2.45A {Vibrio cholerae} SCOP: d.58.18.5 d.58.18.5
Probab=23.45 E-value=80 Score=30.40 Aligned_cols=78 Identities=21% Similarity=0.212 Sum_probs=48.8
Q ss_pred hHHHHHHHHHHHhCCCceeeeccCC--------CCCceEEecCcchHHHHHhHHHHHHHHHHHHHHHcCCeeEecccccC
Q 003194 565 SPVFQEVLADLHSLNISVEQLHAEA--------GKGQFEIALGHTVAAKAADNLIFTREVLRAVARKHGLLATFVPKFAL 636 (840)
Q Consensus 565 ~~~~~~i~~~l~~~Gi~ve~~h~E~--------gpGQ~Ei~l~~~~~l~aaD~~~~~r~~ik~vA~~~Gl~ATFmpKP~~ 636 (840)
-.++.+|.+.|.+.|++|+.+..-. +.+.|-+.+.-.-+ ..-..-.+|..+..+|.++|+...+.+--..
T Consensus 104 ~Gil~~v~~~l~~~~~nI~~~~~~t~~~~~~~~~~~~F~~~~~~~~~--~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~ 181 (192)
T 1u8s_A 104 LGLTEKFTQFFAQRQIGMASLSAQTISKDKLHSEQNQFHIAISARVD--SGCNLMQLQEEFDALCTALDVQGSLNFIKNS 181 (192)
T ss_dssp TTHHHHHHHHHHHTTCCEEEEEEEEEC--------CEEEEEEEEEEC--TTSCHHHHHHHHHHHHHHHTCEEEEEEEEC-
T ss_pred ccHHHHHHHHHHHcCCcHHHhhhhcccCCccCCCCCEEEEEEEEeCC--CCCCHHHHHHHHHHHHHHhCceEEEEEcccc
Confidence 3588999999999999998766542 45666665554322 1113556888888999999999999874322
Q ss_pred CCCCcccccc
Q 003194 637 DDIGSGSHVH 646 (840)
Q Consensus 637 ~~~GsG~H~H 646 (840)
...++|.|
T Consensus 182 --~~~~~~~~ 189 (192)
T 1u8s_A 182 --QEGGSHHH 189 (192)
T ss_dssp ----------
T ss_pred --CCCCcccc
Confidence 33445544
No 101
>3ose_A Serine/threonine-protein kinase MARK1; kinase associated-1(Ka1) domain, transferase, lipid binding membrane association; 1.70A {Homo sapiens} SCOP: d.129.6.1 PDB: 1ul7_A
Probab=22.64 E-value=99 Score=27.75 Aligned_cols=68 Identities=15% Similarity=0.116 Sum_probs=46.0
Q ss_pred CccccchHHHHHHHHHHHhCCCceeeecc-------C----CCCCceEEecCcchHH--H------HHhHHHHHHHHHHH
Q 003194 559 AAYDAVSPVFQEVLADLHSLNISVEQLHA-------E----AGKGQFEIALGHTVAA--K------AADNLIFTREVLRA 619 (840)
Q Consensus 559 ~~~~~~~~~~~~i~~~l~~~Gi~ve~~h~-------E----~gpGQ~Ei~l~~~~~l--~------aaD~~~~~r~~ik~ 619 (840)
++.....+++.+|.+.|.++||..++-.. + .+.-|||+.+--.+.+ - ..=+.+.||.+..+
T Consensus 34 TS~~~P~eIm~eI~rvL~~~gi~~~~~g~y~l~C~~~~~~~~~~v~fElEVckl~~~~l~gV~~kRi~Gd~~~yk~lc~~ 113 (120)
T 3ose_A 34 TSSMDPNDMMREIRKVLDANNCDYEQKERFLLFCVHGDARQDSLVQWEMEVCKLPRLSLNGVRFKRISGTSIAFKNIASK 113 (120)
T ss_dssp EECSCHHHHHHHHHHHHHHTTCEEEEEETTEEEEEESCTTTTCCEEEEEEEEEEGGGTEEEEEEEEEESCHHHHHHHHHH
T ss_pred cccCCHHHHHHHHHHHHHHCCCEEEEcCCEEEEEEecCCCCCccEEEEEEEEEecCCCceeEEEEecCCCHHHHHHHHHH
Confidence 33455789999999999999998887431 1 1245788876443211 1 22266888999998
Q ss_pred HHHHcCC
Q 003194 620 VARKHGL 626 (840)
Q Consensus 620 vA~~~Gl 626 (840)
|..+..|
T Consensus 114 il~~L~L 120 (120)
T 3ose_A 114 IANELKL 120 (120)
T ss_dssp HHHHCCC
T ss_pred HHHHhcC
Confidence 8887653
No 102
>2paj_A Putative cytosine/guanine deaminase; NYSGXRC, PSI-II, amidohydrolase, sargasso SEA, enviro sample, structural genomics; 2.70A {Unidentified} SCOP: b.92.1.4 c.1.9.9
Probab=22.05 E-value=3.1e+02 Score=29.99 Aligned_cols=70 Identities=17% Similarity=0.052 Sum_probs=35.7
Q ss_pred hhhHHHHHHHHHHhhCCCcEEEeeCCCCCCCCcC---C-cChhhhHHHHhhcCCCCcEEEEeCCCCchHHHHHHHHH
Q 003194 211 LIDYIFISSLEVAQFLDLPLQIHTGFGDKDLDLR---L-SNPLHLRAILEDKRFSKCRFVLLHASYPFSKEASYLAY 283 (840)
Q Consensus 211 l~d~~l~~l~e~~~e~glPvq~H~G~gd~~~~~~---~-~~P~~L~~l~~~~~~P~l~~VllH~g~p~~~e~~~la~ 283 (840)
+.+..+..+++.+.++|+++.+|..-.+...... + ..+ +..+.+. ...+-+.++.|+.+-...++..++.
T Consensus 226 ~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~g~~~--~~~~~~~-g~~~~~~~i~H~~~~~~~~i~~l~~ 299 (492)
T 2paj_A 226 ISPREMRETAAVARRLGLRMHSHLSETVGYQDSAYSMYGKSP--VAFCGEH-DWLGSDVWYAHLVKVDADEIALLAQ 299 (492)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEEECC-------------CCCH--HHHHHHT-TCCSTTEEEESCCSCCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCcEEEEeCCChHHHHHHHHHcCCCH--HHHHHHC-CCCCCCcEEEEEecCCHHHHHHHHH
Confidence 3444667788999999999999997432111110 0 122 2222221 2233457788986544444444443
No 103
>3ls9_A Triazine hydrolase; atrazine chlorohydrolase TRZN; 1.40A {Arthrobacter aurescens} PDB: 3lsc_A* 3lsb_A*
Probab=20.83 E-value=5.5e+02 Score=27.37 Aligned_cols=69 Identities=20% Similarity=0.128 Sum_probs=37.4
Q ss_pred hhHHHHHHHHHHhhCCCcEEEeeCCCCCCCCc----CCcChhhhHHHHhhcCCCCcEEEEeCCCCchHHHHHHHHHh
Q 003194 212 IDYIFISSLEVAQFLDLPLQIHTGFGDKDLDL----RLSNPLHLRAILEDKRFSKCRFVLLHASYPFSKEASYLAYV 284 (840)
Q Consensus 212 ~d~~l~~l~e~~~e~glPvq~H~G~gd~~~~~----~~~~P~~L~~l~~~~~~P~l~~VllH~g~p~~~e~~~la~~ 284 (840)
....+..+++.|.++|+++.+|.+-.... .. .-..| +..+.+. ..-+-+.++.|+.+--..+...++..
T Consensus 217 ~~~~l~~~~~~a~~~g~~v~~H~~e~~~~-~~~~~~~~~~~--~~~~~~~-g~~~~~~~i~H~~~~~~~~~~~l~~~ 289 (456)
T 3ls9_A 217 KPELFEAFAQMAADYDVRLHTHFYEPLDA-GMSDHLYGMTP--WRFLEKH-GWASDRVWLAHAVVPPREEIPEFADA 289 (456)
T ss_dssp CHHHHHHHHHHHHHHTCEEEEEECCTTHH-HHHHHHHSSCH--HHHHHHT-TCSSTTEEEEECCSCCGGGHHHHHHH
T ss_pred CHHHHHHHHHHHHHCCCCEEEEeCCCchH-HHHHHHhCCCH--HHHHHHc-CCCCCCcEEEeccCCCHHHHHHHHHc
Confidence 34467788899999999999999643110 00 00112 1222221 23345677889864433444455443
No 104
>1gkr_A Hydantoinase, non-ATP dependent L-selective hydantoinase; hydrolase, dihydropyrimidinase, cyclic amidase; HET: KCX; 2.60A {Arthrobacter aurescens} SCOP: b.92.1.3 c.1.9.6
Probab=20.62 E-value=5.5e+02 Score=27.38 Aligned_cols=33 Identities=15% Similarity=0.208 Sum_probs=21.5
Q ss_pred HHHhhhhcCCCCChhHHHHHHHHHHHHhHHHHhcCCC
Q 003194 346 SVLRDTCIDEDLSVGEAIEVAKDIFALNAAQFYKINL 382 (840)
Q Consensus 346 ~~l~~~v~~g~l~~~ea~~~~~~Il~~NA~rly~l~~ 382 (840)
..+..+++.+.+|.. .+=+.+-.|++++++++.
T Consensus 344 ~~~~~~~~~~~l~~~----~al~~~T~~~A~~lgl~~ 376 (458)
T 1gkr_A 344 MMLTNGVNKGRLSLE----RLVEVMCEKPAKLFGIYP 376 (458)
T ss_dssp HHHHHTGGGTSSCHH----HHHHHHTHHHHHHHTCTT
T ss_pred HHHHHHHHhCCCCHH----HHHHHHhhhHHHHhCCCC
Confidence 344556666778875 334455578888999853
Done!