BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 003195
(840 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q5VYK3|ECM29_HUMAN Proteasome-associated protein ECM29 homolog OS=Homo sapiens GN=ECM29
PE=1 SV=2
Length = 1845
Score = 425 bits (1092), Expect = e-118, Method: Compositional matrix adjust.
Identities = 229/662 (34%), Positives = 391/662 (59%), Gaps = 21/662 (3%)
Query: 1 MSVVYELGDASMKQNLVDALVTTLTGSGKRKRTVKLAEDSEVFQEGAIGEGLGGGKLSTY 60
+ +VYELG+ +Q LV LV TL +GKR + +++ ++ VFQ GA+G+ G LSTY
Sbjct: 1009 LGLVYELGNEQDQQELVSTLVETLM-TGKRVKH-EVSGETVVFQGGALGKTPDGQGLSTY 1066
Query: 61 KELCNLANEMGQPDLIYKFMDLANYQVSLNSKRGAAFGFSKIAKQAGDALKPHLRLLIPK 120
KELC+LA+++ QPDL+YKFM+LAN+ NS++GAAFGF+ IA +AG+ L P L L+P+
Sbjct: 1067 KELCSLASDLSQPDLVYKFMNLANHHAMWNSRKGAAFGFNVIATRAGEQLAPFLPQLVPR 1126
Query: 121 LVRFQYDPDKNVQDAMAHIWKSLVADPKRTIDEHLDLIFDDLLIQSGSRLWRSREASCLS 180
L R+Q+DP+ ++ AM IW +LV D K +D++L I DL+ S +WR RE+SCL+
Sbjct: 1127 LYRYQFDPNLGIRQAMTSIWNALVTD-KSMVDKYLKEILQDLVKNLTSNMWRVRESSCLA 1185
Query: 181 LADIIQGRKFDQVGKHLRRIWTAAFRAMDDIKETVRTAGDKLCRSVTSLTIRLCDVTLTE 240
L D+++GR D + L IW FR DDIKE+VR A + ++++ + +++CD +
Sbjct: 1186 LNDLLRGRPLDDIIDKLPEIWETLFRVQDDIKESVRKAAELALKTLSKVCVKMCDP--AK 1243
Query: 241 ISDARQSMDIVLPFLLAEGILSKVDSISKASIGVVMKLVKGAGIAIRPHLSDLVSCMLES 300
+ ++++ +LP LL +G++S V + SI ++K+ K AG ++PH L+ +LES
Sbjct: 1244 GAAGQRTIAALLPCLLDKGMMSTVTEVRALSINTLVKISKSAGAMLKPHAPKLIPALLES 1303
Query: 301 LSSLEDQGLNYIELHAANAGIQTEKLENLRISIAKGSPMWDTLDLCINVVDTESLDQLVP 360
LS LE Q LNY+ L A + +++ R+S AK SPM +T+++C+ +D L +LVP
Sbjct: 1304 LSVLEPQVLNYLSLRATEQ--EKAAMDSARLSAAKSSPMMETINMCLQYLDVSVLGELVP 1361
Query: 361 HLARLVRSGIGLNTRVGVASFISLLVQKIGMDIKPYTSMLLRLLFPVVKEEKSAAAKRAF 420
L L+RSG+GL T+ G AS I L + D+ PY+ L+ L + ++++ +++
Sbjct: 1362 RLCELIRSGVGLGTKGGCASVIVSLTTQCPQDLTPYSGKLMSALLSGLT-DRNSVIQKSC 1420
Query: 421 ASACASVLKYATPSQAQKLIEETAALHIDDKNS--QISCAILLKSYSSVASDVLSGYHAV 478
A A +++ + S +KL+++ +++ + + SCA+ + + + DVL +
Sbjct: 1421 AFAMGHLVRTSRDSSTEKLLQKLNGWYMEKEEPIYKTSCALTIHAIGRYSPDVLKNHAKE 1480
Query: 479 IVPVIFISRFE------DDKYVSDLFEELWEENTSGDRVTLQLYLGEIVSLICEGIASSS 532
++P+ F+ E +K +L+ E+W+EN G ++LYL E++++ + + S S
Sbjct: 1481 VLPLAFLGMHEIADEEKSEKEECNLWTEVWQENVPGSFGGIRLYLQELITITQKALQSQS 1540
Query: 533 WSSKRKSAKAICKLGEILGESLSNYHHVLLESIMKEVPGRLWEGKDALLYAIGSISTSCH 592
W K + A A+ + + + Y ++L ++++ + GR W GK+ LL AI + T+C
Sbjct: 1541 WKMKAQGAIAMASIAKQTSSLVPPYLGMILTALLQGLAGRTWAGKEELLKAIACVVTACS 1600
Query: 593 KDISAEDPTTPFA--IVDMVSSACRKKIKKYREAAFSCLEQVIKAFRDPK---FFNIIFP 647
++ P P I+ V C K+ KY+ A SC ++KA ++ + F NI+ P
Sbjct: 1601 AELEKSVPNQPSTNEILQAVLKECSKENVKYKIVAISCAADILKATKEDRFQEFSNIVIP 1660
Query: 648 LL 649
L+
Sbjct: 1661 LI 1662
>sp|Q6PDI5|ECM29_MOUSE Proteasome-associated protein ECM29 homolog OS=Mus musculus GN=Ecm29
PE=1 SV=3
Length = 1840
Score = 424 bits (1089), Expect = e-117, Method: Compositional matrix adjust.
Identities = 229/662 (34%), Positives = 392/662 (59%), Gaps = 21/662 (3%)
Query: 1 MSVVYELGDASMKQNLVDALVTTLTGSGKRKRTVKLAEDSEVFQEGAIGEGLGGGKLSTY 60
+ +VYELG+ +Q LV LV TL +GKR + +++ ++ VFQ G +G+ G LSTY
Sbjct: 1004 LGLVYELGNEQDQQELVSTLVETLM-TGKRVKH-EVSGETVVFQGGGLGKTPDGQGLSTY 1061
Query: 61 KELCNLANEMGQPDLIYKFMDLANYQVSLNSKRGAAFGFSKIAKQAGDALKPHLRLLIPK 120
KELC+LA+++ QPDL+YKFM+LAN+ NS++GAAFGF+ IA +AG+ L P L L+P+
Sbjct: 1062 KELCSLASDLSQPDLVYKFMNLANHHAMWNSRKGAAFGFNVIATRAGEQLAPFLPQLVPR 1121
Query: 121 LVRFQYDPDKNVQDAMAHIWKSLVADPKRTIDEHLDLIFDDLLIQSGSRLWRSREASCLS 180
L R+Q+DP+ ++ AM IW +LV D K +D++L I DL+ S +WR RE+SCL+
Sbjct: 1122 LYRYQFDPNLGIRQAMTSIWNALVTD-KSMVDKYLKEILQDLIKNLTSNMWRVRESSCLA 1180
Query: 181 LADIIQGRKFDQVGKHLRRIWTAAFRAMDDIKETVRTAGDKLCRSVTSLTIRLCDVTLTE 240
L D+++GR D V L +W FR DDIKE+VR A + ++++ + +++CD +
Sbjct: 1181 LNDLLRGRPLDDVIDKLPEMWETLFRVQDDIKESVRKAAELALKTLSKVCVKMCDP--AK 1238
Query: 241 ISDARQSMDIVLPFLLAEGILSKVDSISKASIGVVMKLVKGAGIAIRPHLSDLVSCMLES 300
+ ++++ ++LP LL +G++S V + SI ++K+ K AG ++PH L+ +LES
Sbjct: 1239 GAAGQRTIAVLLPCLLDKGMMSPVTEVRALSINTLVKISKSAGAMLKPHAPKLIPALLES 1298
Query: 301 LSSLEDQGLNYIELHAANAGIQTEKLENLRISIAKGSPMWDTLDLCINVVDTESLDQLVP 360
LS LE Q LNY+ L A + + +++ R+S AK SPM +T+++C+ +D L +LVP
Sbjct: 1299 LSVLEPQVLNYLSLRATEQ--EKDVMDSARLSAAKSSPMMETINMCLQYLDVSVLGELVP 1356
Query: 361 HLARLVRSGIGLNTRVGVASFISLLVQKIGMDIKPYTSMLLRLLFPVVKEEKSAAAKRAF 420
L L+RSG+GL T+ G AS I L + D+ PY+ L+ L + ++++ +++
Sbjct: 1357 RLCELIRSGVGLGTKGGCASVIVSLTTQCPQDLTPYSGKLMSALLSGLT-DRNSVIQKSC 1415
Query: 421 ASACASVLKYATPSQAQKLIEETAALHI--DDKNSQISCAILLKSYSSVASDVLSGYHAV 478
A A +++ + S +KL+++ ++ D+ + SCA+ + + + DVL +
Sbjct: 1416 AFAMGHLVRTSRDSSTEKLLQKLNGWYMEKDEPVYKTSCALTIHAIGRYSPDVLKNHAKE 1475
Query: 479 IVPVIFISRFE------DDKYVSDLFEELWEENTSGDRVTLQLYLGEIVSLICEGIASSS 532
++P+ F+ E +K +++ E+W+EN G ++LYL E++++ + + S S
Sbjct: 1476 VLPLAFLGMHEIADEEKSEKEECNMWTEVWQENVPGSFGGIRLYLQELITITQKALQSQS 1535
Query: 533 WSSKRKSAKAICKLGEILGESLSNYHHVLLESIMKEVPGRLWEGKDALLYAIGSISTSCH 592
W K + A A+ + + + Y ++L ++M+ + GR W GK+ LL AI + T+C
Sbjct: 1536 WKMKAQGAIAMASISKQTSSLVPPYLGMILSALMQGLAGRTWAGKEELLKAIACVVTACS 1595
Query: 593 KDISAEDPTTPFA--IVDMVSSACRKKIKKYREAAFSCLEQVIKAFRDPK---FFNIIFP 647
++ P P I+ V C K+ KY+ A SC V+KA ++ + F +I+ P
Sbjct: 1596 TELEKSVPNQPTTNEILQAVLKECCKENLKYKIVAISCAADVLKATKEDRFQEFSDIVIP 1655
Query: 648 LL 649
L+
Sbjct: 1656 LI 1657
>sp|Q5R6J0|ECM29_PONAB Proteasome-associated protein ECM29 homolog (Fragment) OS=Pongo
abelii GN=ECM29 PE=2 SV=2
Length = 1810
Score = 413 bits (1062), Expect = e-114, Method: Compositional matrix adjust.
Identities = 227/662 (34%), Positives = 388/662 (58%), Gaps = 21/662 (3%)
Query: 1 MSVVYELGDASMKQNLVDALVTTLTGSGKRKRTVKLAEDSEVFQEGAIGEGLGGGKLSTY 60
+ +VYELG+ +Q LV LV TL +GKR + +++ ++ VFQ GA+G+ G LSTY
Sbjct: 974 LGLVYELGNEQDQQELVSTLVETLM-TGKRVKH-EVSGETVVFQGGALGKTPDGQGLSTY 1031
Query: 61 KELCNLANEMGQPDLIYKFMDLANYQVSLNSKRGAAFGFSKIAKQAGDALKPHLRLLIPK 120
KELC+LA+++ QPDL+YKFM+LAN+ NS++GAAFGF+ IA +AG+ L P L L+P+
Sbjct: 1032 KELCSLASDLSQPDLVYKFMNLANHHAMWNSRKGAAFGFNVIATRAGEQLAPFLPQLVPR 1091
Query: 121 LVRFQYDPDKNVQDAMAHIWKSLVADPKRTIDEHLDLIFDDLLIQSGSRLWRSREASCLS 180
L R+Q+DP+ ++ AM IW +LV D K +D++L I DL+ S WR RE+SCL+
Sbjct: 1092 LYRYQFDPNLGIRQAMTSIWNALVTD-KSMVDKYLKEILQDLVKNLTSNTWRVRESSCLA 1150
Query: 181 LADIIQGRKFDQVGKHLRRIWTAAFRAMDDIKETVRTAGDKLCRSVTSLTIRLCDVTLTE 240
L D+++GR D + L IW FR DDIKE+VR A + ++++ + +++CD +
Sbjct: 1151 LNDLLRGRPLDDIIDKLPEIWETLFRVQDDIKESVRKAAELALKTLSKVCVKMCDP--AK 1208
Query: 241 ISDARQSMDIVLPFLLAEGILSKVDSISKASIGVVMKLVKGAGIAIRPHLSDLVSCMLES 300
+ ++++ +L LL +G++S V + SI ++K+ K AG ++PH L+ +LES
Sbjct: 1209 GAAGQRTIAALLSCLLDKGMMSPVTEVRALSINTLVKISKSAGAMLKPHAPKLIPALLES 1268
Query: 301 LSSLEDQGLNYIELHAANAGIQTEKLENLRISIAKGSPMWDTLDLCINVVDTESLDQLVP 360
LS LE Q LNY+ L A + +++ R+S AK SPM +T+++C+ +D L +LVP
Sbjct: 1269 LSVLEPQVLNYLSLRATEQ--EKAAMDSARLSAAKSSPMMETINMCLQYLDVSVLGELVP 1326
Query: 361 HLARLVRSGIGLNTRVGVASFISLLVQKIGMDIKPYTSMLLRLLFPVVKEEKSAAAKRAF 420
L L+RSG+GL T+ G AS I L + D+ PY+ L+ L + ++++ +++
Sbjct: 1327 RLCELIRSGVGLGTKGGCASVIVSLTTQCPQDLTPYSGKLMSALLSGLT-DRNSVIQKSC 1385
Query: 421 ASACASVLKYATPSQAQKLIEETAALHIDDKNS--QISCAILLKSYSSVASDVLSGYHAV 478
A A +++ + S +KL+++ +++ + + SCA+ + + + DVL +
Sbjct: 1386 AFAMGHLVRTSRDSSTEKLLQKLNGWYMEKEEPIYKTSCALTIHAIGRYSPDVLKNHAKE 1445
Query: 479 IVPVIFISRFE------DDKYVSDLFEELWEENTSGDRVTLQLYLGEIVSLICEGIASSS 532
++P+ F+ E +K +L+ E+W+EN G ++LYL E++++ + + S S
Sbjct: 1446 VLPLAFLGMHEAADEEKSEKEECNLWTEVWQENVPGSFGGIRLYLQELITITQKALQSQS 1505
Query: 533 WSSKRKSAKAICKLGEILGESLSNYHHVLLESIMKEVPGRLWEGKDALLYAIGSISTSCH 592
W K + A A+ + + + Y ++L ++++ + GR W GK+ LL AI + T+
Sbjct: 1506 WKMKAQGAIAMASIAKQTSSLVPPYLGMILTALLQGLAGRTWAGKEELLKAIACVVTAYS 1565
Query: 593 KDISAEDPTTPFA--IVDMVSSACRKKIKKYREAAFSCLEQVIKAFRDPK---FFNIIFP 647
++ P P I+ V C K+ KY+ A SC V+KA ++ + F +I+ P
Sbjct: 1566 AELEKSVPNQPSTNEILQAVLKECSKENLKYKIVAISCAADVLKATKEDRFQEFSDIVIP 1625
Query: 648 LL 649
L+
Sbjct: 1626 LI 1627
>sp|Q9V677|ECM29_DROME Proteasome-associated protein ECM29 homolog OS=Drosophila
melanogaster GN=CG8858 PE=1 SV=1
Length = 1890
Score = 303 bits (775), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 199/708 (28%), Positives = 357/708 (50%), Gaps = 47/708 (6%)
Query: 1 MSVVYELGDASMKQNLVDALVTTLTGSGKRKRTVKLAEDSEVFQEGAIGEGLGGGKLSTY 60
+ +VY + D+ + +L ++L+ L G GKRK ++ D+E+F EG +G+ GG ++TY
Sbjct: 1009 LGLVYSISDSGSQSDLANSLLDQLIG-GKRKVN-QVTADTELFAEGMLGKTPTGGNITTY 1066
Query: 61 KELCNLANEMGQPDLIYKFMDLANYQVSLNSKRGAAFGFSKIAKQAGDALKPHLRLLIPK 120
KELC+LA+++ QPD+IY+FM LAN+ + SK GAAFG ++ ++ ++P+L +IP+
Sbjct: 1067 KELCSLASDLNQPDMIYQFMQLANHNATWTSKLGAAFGLKTLSAESRQKMEPYLGKIIPR 1126
Query: 121 LVRFQYDPDKNVQDAMAHIWKSLVADPKRTIDEHLDLIFDDLLIQSGSRLWRSREASCLS 180
L R++YDP +Q++M IW ++V D K + + I +LL + WR R A CL+
Sbjct: 1127 LYRYKYDPTPKIQNSMISIWDTIVTDSKEVTERYYWEILRELLDNLTCKEWRVRIACCLA 1186
Query: 181 LADII---QGRKF-----------------DQVGK-HLRRIWTAAFRAMDDIKETVRTAG 219
+ D++ G K D+V + L+ +W FR MDDI E R A
Sbjct: 1187 VRDLLNRPNGLKLRSEEPVRRALPDNSMEVDEVPEPELKELWFQLFRVMDDIHEGTRVAA 1246
Query: 220 DKLCRSVTSLTIRLCDVTLTEISDARQSMDIV----LPFLLAEGILSKVDSISKASIGVV 275
S +LC + SD +S V LPFLL G+ KV I + SI +
Sbjct: 1247 ----HGTASFLGKLC--VIASSSDHGKSGTAVASSILPFLLETGVGHKVPEIRRVSIKTI 1300
Query: 276 MKLVKGAGIAIRPHLSDLVSCMLESLSSLEDQGLNYIELHAANAGIQTEKLENLRISIAK 335
++ +G I PHL+ L+ C+L + LE+ L+Y+ E ++ LR AK
Sbjct: 1301 SDMIDSSGSLIAPHLATLIPCLLRATGELENTKLSYVSTRLGADNEAQEAVDTLRAEAAK 1360
Query: 336 GSPMWDTLDLCINVVDTESLDQLVPHLARLVRSGIGLNTRVGVASFISLLVQKIGMDIKP 395
+T+ C+ +D L+++ P + L++ + L T++G A F+ L+ ++G ++ P
Sbjct: 1361 SLHTMETIGKCVRYIDYSVLEKMTPEVLELMKGSVNLGTKIGCAHFVCLISIRLGKEMTP 1420
Query: 396 YTSMLLRLLFPVVKEEKSAAAKRAFASACASVLKYATPSQAQKLIEETAALHIDDKNSQI 455
+R F +K ++A ++ ASA +L A + L + L+ + ++
Sbjct: 1421 LVGKYIRACFVGIK-NRNATVRKYNASAIGHLLGLAKEQSIKSLFTKLEELYAEQPGNR- 1478
Query: 456 SCAILLKSYSSVASDVLSGYHAVIVPVIFISRF----EDDKYVSDLFEELWEENTSGDRV 511
S A+ ++S + ++L Y ++P+IF + E+ K +L+++LW + + GD
Sbjct: 1479 SIALTIQSINKRHHELLKDYMDSMLPLIFFAMHEEPNEETKANVELWKDLWHDVSPGD-A 1537
Query: 512 TLQLYLGEIVSLICEGIASSSWSSKRKSAKAICKLGEILGESLSNYHHV-LLESIMKEVP 570
++L L I+ + + +SWS K ++A AI + L SL + L++ ++ +
Sbjct: 1538 GIRLNLNVIIPKLESSLTDASWSRKAQAANAIQTIATRLSSSLDEPDRLRLIKLLLSGLQ 1597
Query: 571 GRLWEGKDALLYAIGSISTSCHKDISAEDPTTPFAIVDMVSSACRKKIKKYREAAFSCLE 630
GR +EGK+ LL A+ +++ ++ +I+D RK+ YR A + L
Sbjct: 1598 GRTFEGKERLLQALAALTKGLDRNHQICS-----SIIDAAMREARKREPVYRTMALASLG 1652
Query: 631 QVIKAFRDPKFFNIIFPLLFEMCGSTALNKSGQVPLPSDASKEESADE 678
+++ +F ++ + + + L K + S+E SADE
Sbjct: 1653 EILDQLEADRFEE-VYNMSWNLLEKKELRKESDDEDEPNTSQELSADE 1699
>sp|P38737|ECM29_YEAST Proteasome component ECM29 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=ECM29 PE=1 SV=1
Length = 1868
Score = 287 bits (734), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 194/694 (27%), Positives = 370/694 (53%), Gaps = 29/694 (4%)
Query: 1 MSVVYELGDASMKQNLVDALVTTLT----GSGKRKRTV---KLAEDSEVFQEGAIGEGLG 53
+S+VYE+G + +K+++V L+ + T GS T ++E++E+F+ G + G
Sbjct: 1016 LSLVYEIGGSDLKESMVKGLLKSFTESTAGSASTSATGISGSVSEETELFEPGVLNTG-- 1073
Query: 54 GGKLSTYKELCNLANEMGQPDLIYKFMDLANYQVSLNSKRGAAFGFSKI-AKQAGDAL-- 110
G +STYK++ NLA+E+G P L+YKFM LA +S++G AFG I +K + + L
Sbjct: 1074 DGSISTYKDILNLASEVGDPALVYKFMSLAKSSALWSSRKGIAFGLGAIMSKSSLEELLL 1133
Query: 111 --KPHLRLLIPKLVRFQYDPDKNVQDAMAHIWKSLVADPKRTIDEHLDLIFDDLLIQSGS 168
+ + LIPKL R+++DP + V +M IW +L+ + TI + + I D+LL +
Sbjct: 1134 KDQQTAKKLIPKLYRYRFDPFQAVSRSMTDIWNTLIPESSLTISLYFNDILDELLCGMAN 1193
Query: 169 RLWRSREASCLSLADIIQGRKFDQVGKHLRRIWTAAFRAMDDIKETVRTAGDKLCRSVTS 228
+ WR REAS +L +IQ + ++ + + +IWT AFR MDDIK++VR G K +
Sbjct: 1194 KEWRVREASTSALLQLIQSQPQEKFSEKMLKIWTMAFRTMDDIKDSVREVGTKFTTVLAK 1253
Query: 229 LTIRLCDVTL-TEISDARQSMDIVLPFLLA-EGILSKVDSISKASIGVVMKLVKGAGIAI 286
+ R DV + +++ +D +LPFL G+ S + + ++ ++ LVK + AI
Sbjct: 1254 ILARSIDVEKGVNPTKSKEILDNILPFLWGPHGLNSDAEEVRNFALTTLIDLVKHSPGAI 1313
Query: 287 RPHLSDLVSCMLESLSSLEDQGLNYIELHAANAGIQTEKLENLRISIAKGSPMWDTLDLC 346
+P L+ + SS+E Q +NY+ L+AAN I ++ R + SP++ T++
Sbjct: 1314 KPFTPKLIYDFITLFSSIEPQVINYLALNAANYNIDANVIDTQRKNGVTNSPLFQTIEKL 1373
Query: 347 INVVDTESLDQLVPHLARLVRSGIGLNTRVGVASFISLLVQKIGMDIKPYTSMLLRLLFP 406
IN D +++++ + + R +GL ++V + I +LV++ +++KPY+ LL++
Sbjct: 1374 INNSDDCMMEEIINVVIKASRKSVGLPSKVASSLVIIILVKRYSIEMKPYSGKLLKVCLT 1433
Query: 407 VVKEEKSAAAKRAFASACASVLKYATPSQAQKLIEETAALHID---DKNSQISCAILLKS 463
+ E+++ + AFA + + K + + K E+ + + +N++ + S
Sbjct: 1434 MF-EDRNESVNIAFAISMGYLFKVSALDKCIKYSEKLITKYFEPTSTENNKKVVGTAIDS 1492
Query: 464 YSSVASDVLSGYHAVIVPVIFISRFEDDKYVSDLFEELWEENTSGDRVTLQLYLGEIVSL 523
+ A +V +P+IFI+ ++DK + L+ ++W E +S T++LYL EI+++
Sbjct: 1493 ILNYAKSEFDNVASVFMPLIFIACNDEDKDLETLYNKIWTEASSSGAGTVKLYLPEILNV 1552
Query: 524 ICEGIASSSWSSKRKSAKAICKLGEILGESLSNYHHVLLESIMKE-VPGRLWEGKDALLY 582
+C I S+ +S ++ AK++ +L + +S+ V L I +E + GR W+GK+ ++
Sbjct: 1553 LCVNIKSNDFSIRKTCAKSVIQLCGGINDSIPYPQIVKLFDISREALSGRSWDGKEHIVA 1612
Query: 583 AIGSISTSCHKDISAEDPTTPFAIVDMVSSACRKKIKKYREAAFSCLEQVIKAFRDPKFF 642
A+ S++ + + A++ +I ++ + +K KY + + I +P+
Sbjct: 1613 ALVSLTEKFSQTV-ADNNDLQESINHVMYTEVSRKSMKYVKKILPLYARYINV--NPQEE 1669
Query: 643 NIIFPL-----LFEMCGSTALNKSGQVPLPSDAS 671
I F + + + GS + + G + SD S
Sbjct: 1670 TITFLIEKAKEMIRLLGSESDDSEGSIKQTSDES 1703
>sp|Q9P7H8|ECM29_SCHPO Proteasome component ecm29 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=ecm29 PE=1 SV=1
Length = 1679
Score = 224 bits (572), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 172/600 (28%), Positives = 286/600 (47%), Gaps = 34/600 (5%)
Query: 1 MSVVYELGDASMKQNLVDALVTTLTGSGKRKRT-VKLAEDSEVFQEGAIGEGLGGGKLST 59
+ +Y++ + +++ D L++T+ ++T L D+ +F G ++T
Sbjct: 912 LKAMYDVLEGDERKSFTDNLISTIAADRVDEKTKAPLDADTALFTTN-------KGTVAT 964
Query: 60 YKELCNLANEMGQPDLIYKFMDLANYQVSLNSKRGAAFGFSKIAKQAGDALKPH------ 113
YK++C+LA+E G PDLIY F+ +A +++G A G S + K
Sbjct: 965 YKDICSLASESGNPDLIYSFLSIAGNSSLWQARKGLASGISYLGIPEDQKRKTFSFDTSK 1024
Query: 114 LRLLIPKLVRFQYDPDKNVQDAMAHIWKSLVADPKRTIDEHLDLIFDDLLIQSGSRLWRS 173
L+ KL RF++DP+ +V M IW +LV + H + +D L GSR WR
Sbjct: 1025 SSSLLKKLYRFKHDPNPDVAKTMGEIWDTLVPS-DLNLASHRKYLVEDCLEFMGSRSWRD 1083
Query: 174 REASCLSLADIIQGRKFDQVGKHLRRIWTAAFRAMDDIKETVRTAGDKLC----RSV-TS 228
RE+S +L ++ + L IW +FR +DDIKE+VR A LC RSV S
Sbjct: 1084 RESSVNTLVSLLSNVPVTEYLNQLEDIWNMSFRTLDDIKESVREASFPLCKLLARSVIQS 1143
Query: 229 LTIRLCDVTLTEISDARQSMDIVLPFLLAEGILSKVDSISKASIGVVMKLVKGAGIAIRP 288
L + + + I ++ + + LPFLL + + + + +LV+ +
Sbjct: 1144 LEKTSHNTSPSGICKGKRIVSVALPFLLKHA-YDQAKEVRSLTYSTITELVRTGNSTLTS 1202
Query: 289 HLSDLVSCMLESLSSLEDQGLNYIELHAANAGIQTEKLENLRISIAKGSPMWDTLDLCIN 348
+ ++ MLE L+ E + +++ HA N I+ E ++N R S + S M DTL+ CI
Sbjct: 1203 FVPAIMQVMLEYLTEYESKAATFLDFHAKNYSIKQENIDNARTSAVQSSSMMDTLEKCIG 1262
Query: 349 VVDTESLDQLVPHLARLVRSGIGLNTRVGVASFISLLVQKIGMDIKPYTSMLLRLLFPVV 408
++D S+ L P L R++ G+ T++G A + LLV + G +K + S LL+ L
Sbjct: 1263 LLDESSMQTLYPILNRMIAKPGGVPTKIGSAQVVMLLVIRRGPLVKQFASKLLQSLKSSC 1322
Query: 409 KEEKSAAAKRAFASACASVLKYATPSQAQKLIEETAALHID-DKNSQISCAILLKSYSSV 467
+++AA AFASA +L+ A + +E D + N QI + L S
Sbjct: 1323 F-DRNAAVSDAFASAIGYLLRVCPLEIASQTCQEIIDKFYDGNTNEQIISSKLTVYASRY 1381
Query: 468 ASDVLSGYHAVIVPVIFISRFEDDKYVSDLFEELWEENTSGDRVTLQLYLGEIVSLICEG 527
A DV ++ P IF + ++ + + W+E +S ++ LY EI+ LI +
Sbjct: 1382 APDVFLNLGSLFFPFIFFGKHSSSISINGVLSKAWDELSSAGS-SVNLYSEEIILLIQKN 1440
Query: 528 IASSSWSSKRKSAKAICKLGEILGESLSNYH----HVLLESIMKEVPGRLWEGKDALLYA 583
+ + W KR +A A L E + S Y +VLL MK+ + W GK+ LL A
Sbjct: 1441 LIVTKWDVKRPAAAA---LLEFVNTSRLTYRQNDIYVLLNETMKD---KSWPGKELLLEA 1494
>sp|A5UIY9|CAPP_HAEIG Phosphoenolpyruvate carboxylase OS=Haemophilus influenzae (strain
PittGG) GN=ppc PE=3 SV=1
Length = 879
Score = 40.4 bits (93), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 75/165 (45%), Gaps = 21/165 (12%)
Query: 408 VKEEKSAAAKRAFASACASVLKYATPSQAQKLIEETAALHIDDKNSQISCAILLKSYSSV 467
++++K A R +S + + TPS K I +T + K I+C ++ S +
Sbjct: 421 MEDDKQAFLIRELSSRRPLIPQNWTPSPETKEILDTCKVIAQQKQGVIACYVI--SMARS 478
Query: 468 ASDVL--------SG--YHAVIVPVIFISRFED----DKYVSDLFEELWEENTSGDRVTL 513
ASDVL SG YH +VP+ ED +K ++ LF W +R +
Sbjct: 479 ASDVLAVHLLLKESGVPYHIPVVPL--FETLEDLDAAEKVMTQLFNVGWYRGVINNRQMV 536
Query: 514 QLYLGEIVSLICEGIASSSWSSKRKSAKAICKLGEILGESLSNYH 558
+G S G+ ++SW+ R + +A+ L E LG L+ +H
Sbjct: 537 M--IGYSDSAKDAGMMAASWAQYR-AQEALVNLTEKLGIELTLFH 578
>sp|P43920|CAPP_HAEIN Phosphoenolpyruvate carboxylase OS=Haemophilus influenzae (strain
ATCC 51907 / DSM 11121 / KW20 / Rd) GN=ppc PE=3 SV=1
Length = 879
Score = 40.4 bits (93), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 75/165 (45%), Gaps = 21/165 (12%)
Query: 408 VKEEKSAAAKRAFASACASVLKYATPSQAQKLIEETAALHIDDKNSQISCAILLKSYSSV 467
++++K A R +S + + TPS K I +T + K I+C ++ S +
Sbjct: 421 MEDDKQAFLIRELSSRRPLIPQNWTPSPETKEILDTCKVIAQQKQGVIACYVI--SMARS 478
Query: 468 ASDVL--------SG--YHAVIVPVIFISRFED----DKYVSDLFEELWEENTSGDRVTL 513
ASDVL SG YH +VP+ ED +K ++ LF W +R +
Sbjct: 479 ASDVLAVHLLLKESGVPYHIPVVPL--FETLEDLDAAEKVMTQLFNVGWYRGVINNRQMV 536
Query: 514 QLYLGEIVSLICEGIASSSWSSKRKSAKAICKLGEILGESLSNYH 558
+G S G+ ++SW+ R + +A+ L E LG L+ +H
Sbjct: 537 M--IGYSDSAKDAGMMAASWAQYR-AQEALVNLTEKLGIELTLFH 578
>sp|Q4QL71|CAPP_HAEI8 Phosphoenolpyruvate carboxylase OS=Haemophilus influenzae (strain
86-028NP) GN=ppc PE=3 SV=1
Length = 879
Score = 40.4 bits (93), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 74/165 (44%), Gaps = 21/165 (12%)
Query: 408 VKEEKSAAAKRAFASACASVLKYATPSQAQKLIEETAALHIDDKNSQISCAILLKSYSSV 467
++++K A R +S + + TPS K I +T + K I+C ++ S +
Sbjct: 421 MEDDKQAFLIRELSSRRPLIPQNWTPSPETKEILDTCKVIAQQKQGVIACYVI--SMARS 478
Query: 468 ASDVLS----------GYHAVIVPVIFISRFED----DKYVSDLFEELWEENTSGDRVTL 513
ASDVL+ YH +VP+ ED +K ++ LF W +R +
Sbjct: 479 ASDVLAVHLLLKEAGVPYHIPVVPL--FETLEDLDAAEKVMTQLFNVGWYRGVINNRQMV 536
Query: 514 QLYLGEIVSLICEGIASSSWSSKRKSAKAICKLGEILGESLSNYH 558
+G S G+ ++SW+ R + +A+ L E LG L+ +H
Sbjct: 537 M--IGYSDSAKDAGMMAASWAQYR-AQEALVNLTEKLGIELTLFH 578
>sp|A5UCN0|CAPP_HAEIE Phosphoenolpyruvate carboxylase OS=Haemophilus influenzae (strain
PittEE) GN=ppc PE=3 SV=1
Length = 879
Score = 38.5 bits (88), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 73/165 (44%), Gaps = 21/165 (12%)
Query: 408 VKEEKSAAAKRAFASACASVLKYATPSQAQKLIEETAALHIDDKNSQISCAILLKSYSSV 467
+++K A R +S + + TPS + I +T + K I+C ++ S +
Sbjct: 421 TEDDKQAFLIRELSSRRPLIPQNWTPSPETQEILDTCKVIAQQKQGVIACYVI--SMARN 478
Query: 468 ASDVLS----------GYHAVIVPVIFISRFED----DKYVSDLFEELWEENTSGDRVTL 513
ASDVL+ YH +VP+ ED +K ++ LF W +R +
Sbjct: 479 ASDVLAVHLLLKEAGVPYHIPVVPL--FETLEDLDAAEKVMTQLFNVGWYRGVINNRQMV 536
Query: 514 QLYLGEIVSLICEGIASSSWSSKRKSAKAICKLGEILGESLSNYH 558
+G S G+ ++SW+ R + +A+ L E LG L+ +H
Sbjct: 537 M--IGYSDSAKDAGMMAASWAQYR-AQEALVNLTEKLGIELTLFH 578
>sp|Q54WR2|GCN1L_DICDI Translational activator gcn1 OS=Dictyostelium discoideum GN=gcn1l1
PE=3 SV=1
Length = 2667
Score = 37.4 bits (85), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 58/129 (44%), Gaps = 18/129 (13%)
Query: 50 EGLGGGKLSTYKELCNLANEMGQPDLIYKFMDLANYQVSLNSKRGAAFGFSKIAKQAGDA 109
+GLG G L Y L D + +++ + S ++GA F F + G
Sbjct: 1405 KGLGIGSLKNYSIL----------DTLQSYIEDKKHPTS---RQGALFAFECLCNTIGRV 1451
Query: 110 LKPHLRLLIPKLVRFQYDPDKNVQDAMAHIWKSLVADPKRTIDEH-LDLIFDDLLIQSGS 168
+P++ ++PKL+ D V+DA A K++++ + H + ++ LL
Sbjct: 1452 FEPYIIHILPKLLVCFGDNVSEVRDATADTAKAIMSQ----LSGHGVKIVLPALLKALDD 1507
Query: 169 RLWRSREAS 177
R WR++E S
Sbjct: 1508 RSWRTKEGS 1516
Score = 34.7 bits (78), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 53/253 (20%), Positives = 102/253 (40%), Gaps = 64/253 (25%)
Query: 111 KPHLRLLIPKLVRFQYDPDKNVQDAMAHIWKSLVADPKRTIDEHL--------------- 155
K L ++ L ++D + +V+ + IWK +V++ +T+ E L
Sbjct: 1881 KERLGRILSSLYMMRFDNNSSVRQKVLLIWKYIVSNTPKTLREILPTLIEMIISSIGSNN 1940
Query: 156 -------------------DLIFDDLL--IQSG--SRLWRSREASCLSLADIIQGRKFDQ 192
D I ++L ++ G S L +R+ C+ L+++I K Q
Sbjct: 1941 VEKRQISAKTLGDIVSKLSDRILPEILPILERGLRSELEETRQGVCIGLSEVISSAK-TQ 1999
Query: 193 VGKHLRRIWTAAFRAM----DDIKETVRTAGDKLCRSVTSLTIRLCDVTLTEISDARQSM 248
+ +L + T +A+ D++E A D L + S L ++ D +
Sbjct: 2000 LLPYLSSVVTCITKALCDPLIDVREAAAKAFDHLYHTFGSKASNEILPQLIQLLDNSNNK 2059
Query: 249 D------------------IVLPFLLAEGILSKVDSISKASIGVVMKLVKGAGIAIRPHL 290
D IVLP L+ + +LS+ IS +++ + L AG + HL
Sbjct: 2060 DLAGYALDGLRQVILVRSSIVLPVLIPK-LLSR--PISTSNVTALSSLAADAGEGLYVHL 2116
Query: 291 SDLVSCMLESLSS 303
S ++ ++ES ++
Sbjct: 2117 STIIPSLIESFTN 2129
>sp|Q9KNT4|CAPP_VIBCH Phosphoenolpyruvate carboxylase OS=Vibrio cholerae serotype O1
(strain ATCC 39315 / El Tor Inaba N16961) GN=ppc PE=3
SV=2
Length = 876
Score = 35.4 bits (80), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 35/73 (47%), Gaps = 5/73 (6%)
Query: 532 SWSSKRKSAKAICKLGEILGESLSNYHHVLLESIMKEVP---GRLWEGKDALLYAIGSIS 588
SWS R A GE + +++ H LLE + +E P RL G ++Y S+S
Sbjct: 717 SWSQNRLILPAWLGAGEAIQIAINEGHQALLEEMCREWPFFSTRL--GMLEMVYTKCSVS 774
Query: 589 TSCHKDISAEDPT 601
+CH D +PT
Sbjct: 775 IACHYDERLVEPT 787
>sp|Q8K023|AKC1H_MOUSE Aldo-keto reductase family 1 member C18 OS=Mus musculus GN=Akr1c18
PE=2 SV=2
Length = 323
Score = 33.1 bits (74), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 69/147 (46%), Gaps = 28/147 (19%)
Query: 256 LAEGILSKVD--SISKASIGVVMKLVKGAGIAIRPHLSDLVSCMLESLSSLEDQGLNYIE 313
+ + ILSK++ ++ + I KL + H +LV LE+ SL L+Y++
Sbjct: 61 IGQAILSKIEDGTVKREDIFYTSKLWSTS------HRPELVRPSLEN--SLRKLNLDYVD 112
Query: 314 LHAANAGIQTEKLENLRISIAKGSPMWDTLDLCINVVDT-ESLDQLVPHLARLVRSGIGL 372
L+ + + + L G+ ++DT+DLC DT E++++ GL
Sbjct: 113 LYLIHFPVSLKPGNELLPKDEHGNLIFDTVDLC----DTWEAMEKC---------KDAGL 159
Query: 373 NTRVGVASF----ISLLVQKIGMDIKP 395
+GV++F + +++ K G+ KP
Sbjct: 160 AKSIGVSNFNRRQLEMILNKPGLKYKP 186
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.133 0.379
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 288,601,494
Number of Sequences: 539616
Number of extensions: 11686562
Number of successful extensions: 31634
Number of sequences better than 100.0: 20
Number of HSP's better than 100.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 31553
Number of HSP's gapped (non-prelim): 44
length of query: 840
length of database: 191,569,459
effective HSP length: 126
effective length of query: 714
effective length of database: 123,577,843
effective search space: 88234579902
effective search space used: 88234579902
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 66 (30.0 bits)