Citrus Sinensis ID: 003198
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 840 | 2.2.26 [Sep-21-2011] | |||||||
| Q9ZSM8 | 856 | Histone-lysine N-methyltr | yes | no | 0.934 | 0.917 | 0.570 | 0.0 | |
| Q8S4P4 | 895 | Histone-lysine N-methyltr | N/A | no | 0.929 | 0.872 | 0.509 | 0.0 | |
| P93831 | 902 | Histone-lysine N-methyltr | no | no | 0.938 | 0.873 | 0.463 | 0.0 | |
| Q8S4P6 | 931 | Histone-lysine N-methyltr | N/A | no | 0.926 | 0.835 | 0.456 | 0.0 | |
| Q8S4P5 | 894 | Histone-lysine N-methyltr | N/A | no | 0.428 | 0.402 | 0.776 | 1e-169 | |
| O65312 | 689 | Histone-lysine N-methyltr | no | no | 0.396 | 0.483 | 0.534 | 1e-107 | |
| Q28D84 | 748 | Histone-lysine N-methyltr | yes | no | 0.360 | 0.405 | 0.424 | 6e-69 | |
| Q98SM3 | 748 | Histone-lysine N-methyltr | N/A | no | 0.360 | 0.405 | 0.421 | 7e-69 | |
| Q61188 | 746 | Histone-lysine N-methyltr | yes | no | 0.360 | 0.406 | 0.430 | 1e-68 | |
| Q4R381 | 746 | Histone-lysine N-methyltr | N/A | no | 0.360 | 0.406 | 0.427 | 2e-68 |
| >sp|Q9ZSM8|EZA1_ARATH Histone-lysine N-methyltransferase EZA1 OS=Arabidopsis thaliana GN=EZA1 PE=2 SV=1 | Back alignment and function desciption |
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Score = 909 bits (2349), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 484/848 (57%), Positives = 592/848 (69%), Gaps = 63/848 (7%)
Query: 30 KLNQLKKQVQAERVVSVKDKIEKNRKKIENDISQLLSTTSRKSVIFAMDNGFGNM----- 84
+L++LK+++Q ERV S+K+K E NRKK++ +S S S ++ A DNG NM
Sbjct: 35 RLSELKRKIQGERVRSIKEKFEANRKKVDAHVSPFSSAASSRAT--AEDNGNSNMLSSRM 92
Query: 85 --PLCKYSGFPQGLGDRDYVNSHEVVLSTSSKLSHVQKIPPYTTWIFLDKNQRMAEDQSV 142
PLCK +GF G+GDRDYV + +V+ S S KL ++IPPYTTWIFLD+NQRMAEDQSV
Sbjct: 93 RMPLCKLNGFSHGVGDRDYVPTKDVI-SASVKLPIAERIPPYTTWIFLDRNQRMAEDQSV 151
Query: 143 VGRRRIYYDQHGSEALVCSDSEEDIIEPEEEKHEFSDGEDRILWTVFEEHGLGEEVINAV 202
VGRR+IYY+QHG E L+CSDSEE+ EEEK EFS+GED I+W + +E+G+GEEV +A+
Sbjct: 152 VGRRQIYYEQHGGETLICSDSEEEPEP-EEEKREFSEGEDSIIWLIGQEYGMGEEVQDAL 210
Query: 203 SQFIGIATSEVQDRYSTLKEKYDGKNLKEFEDAGHERGIALEKSLSAALDSFDNLFCRRC 262
Q + + S++ +RY+ LK K D +N +EF ++G + GI+LEK L AALDSFDNLFCRRC
Sbjct: 211 CQLLSVDASDILERYNELKLK-DKQNTEEFSNSGFKLGISLEKGLGAALDSFDNLFCRRC 269
Query: 263 LLFDCRLHGCSQTLINPSRAVQDTVEGSAGNISSIITNTEGTLLHCNA----------EV 312
L+FDCRLHGCSQ LI SA ++ EG C+ EV
Sbjct: 270 LVFDCRLHGCSQPLI------------SASEKQPYWSDYEGDRKPCSKHCYLQLKAVREV 317
Query: 313 PGAHSDIMAGERCNSKRVLPVTSEAVDS-------SEVAIGNENTDTSMQSLGKRKALEL 365
P S+ + K S+AV S S V++ E TD ++++ +E
Sbjct: 318 PETCSNFASKA--EEKASEEECSKAVSSDVPHAAASGVSLQVEKTDIGIKNVDSSSGVEQ 375
Query: 366 NDSVKVFDEIE--------ESLNKKQKKLLPLDVLTASSDGIPRPDT---KSGHHVGAIN 414
++ E+ +L+ K++K D + + +P D + G
Sbjct: 376 EHGIRGKREVPILKDSNDLPNLSNKKQKTAASDTKMSFVNSVPSLDQALDSTKGDQGGTT 435
Query: 415 DNELQMTSKNTIKKSVSAKVVSHNNIEHNIMDGAKDVNK--EPEMKQSFSKGELPEGVLC 472
DN++ S+ AK V ++++ DG + + + E+ E
Sbjct: 436 DNKVNRDSE------ADAKEVGEPIPDNSVHDGGSSICQPHHGSGNGAIIIAEMSETSRP 489
Query: 473 SSEWKPIEKELYLKGVEIFGRNSCLIARNLLSGLKTCMEVSTYMRDSSSSMPHKSVAPSS 532
S+EW PIEK+LYLKGVEIFGRNSCLIARNLLSGLKTC++VS YMR++ S+ +S P+
Sbjct: 490 STEWNPIEKDLYLKGVEIFGRNSCLIARNLLSGLKTCLDVSNYMRENEVSVFRRSSTPNL 549
Query: 533 FLEETVKVDTDYAEQEMPARPRLLRRRGRARKLKYSWKSAGHPSIWKRIADGKNQSCKQY 592
L++ + D E+P R RL RR+G+ RKLKYS KSAGHPS+WKRIA GKNQSCKQY
Sbjct: 550 LLDDG-RTDPGNDNDEVPPRTRLFRRKGKTRKLKYSTKSAGHPSVWKRIAGGKNQSCKQY 608
Query: 593 TPCGCQSMCGKQCPCLHNGTCCEKYCGCSKSCKNRFRGCHCAKSQCRSRQCPCFAAGREC 652
TPCGC SMCGK CPCL N TCCEKYCGCSKSCKNRFRGCHCAKSQCRSRQCPCFAAGREC
Sbjct: 609 TPCGCLSMCGKDCPCLTNETCCEKYCGCSKSCKNRFRGCHCAKSQCRSRQCPCFAAGREC 668
Query: 653 DPDVCRNCWVSCGDGSLGEPPKRGDGQCGNMRLLLRQQQRILLAKSDVAGWGAFLKNSVS 712
DPDVCRNCWVSCGDGSLGE P+RG+GQCGNMRLLLRQQQRILL KSDVAGWGAFLKNSVS
Sbjct: 669 DPDVCRNCWVSCGDGSLGEAPRRGEGQCGNMRLLLRQQQRILLGKSDVAGWGAFLKNSVS 728
Query: 713 KNDYLGEYTGELISHREADKRGKIYDRANSSFLFDLNDQYVLDAYRKGDKLKFANHSSNP 772
KN+YLGEYTGELISH EADKRGKIYDRANSSFLFDLNDQYVLDA RKGDKLKFANHS+ P
Sbjct: 729 KNEYLGEYTGELISHHEADKRGKIYDRANSSFLFDLNDQYVLDAQRKGDKLKFANHSAKP 788
Query: 773 NCFAKVMLVAGDHRVGIFAKEHIEASEELFYDYRYGPDQAPAWARKPEGSKREDSSVSQG 832
NC+AKVM VAGDHRVGIFA E IEASEELFYDYRYGPDQAP WARKPEGSK++DS+++
Sbjct: 789 NCYAKVMFVAGDHRVGIFANERIEASEELFYDYRYGPDQAPVWARKPEGSKKDDSAITHR 848
Query: 833 RAKKHQSH 840
RA+KHQSH
Sbjct: 849 RARKHQSH 856
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Polycomb group (PcG) protein. Catalytic subunit of some PcG multiprotein complex, which methylates 'Lys-27' of histone H3, leading to transcriptional repression of the affected target genes. PcG proteins act by forming multiprotein complexes, which are required to maintain the transcriptionally repressive state of homeotic genes throughout development. PcG proteins are not required to initiate repression, but to maintain it during later stages of development. Arabidopsis thaliana (taxid: 3702) EC: 2EC: .EC: 1EC: .EC: 1EC: .EC: 4EC: 3 |
| >sp|Q8S4P4|EZ3_MAIZE Histone-lysine N-methyltransferase EZ3 OS=Zea mays GN=EZ3 PE=2 SV=1 | Back alignment and function description |
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| >sp|P93831|CLF_ARATH Histone-lysine N-methyltransferase CLF OS=Arabidopsis thaliana GN=CLF PE=1 SV=2 | Back alignment and function description |
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| >sp|Q8S4P6|EZ1_MAIZE Histone-lysine N-methyltransferase EZ1 OS=Zea mays GN=EZ1 PE=2 SV=1 | Back alignment and function description |
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| >sp|Q8S4P5|EZ2_MAIZE Histone-lysine N-methyltransferase EZ2 OS=Zea mays GN=EZ2 PE=2 SV=1 | Back alignment and function description |
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| >sp|O65312|MEDEA_ARATH Histone-lysine N-methyltransferase MEDEA OS=Arabidopsis thaliana GN=MEA PE=1 SV=1 | Back alignment and function description |
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| >sp|Q28D84|EZH2_XENTR Histone-lysine N-methyltransferase EZH2 OS=Xenopus tropicalis GN=ezh2 PE=2 SV=1 | Back alignment and function description |
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| >sp|Q98SM3|EZH2A_XENLA Histone-lysine N-methyltransferase EZH2 OS=Xenopus laevis GN=ezh2-a PE=2 SV=1 | Back alignment and function description |
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| >sp|Q61188|EZH2_MOUSE Histone-lysine N-methyltransferase EZH2 OS=Mus musculus GN=Ezh2 PE=1 SV=2 | Back alignment and function description |
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| >sp|Q4R381|EZH2_MACFA Histone-lysine N-methyltransferase EZH2 OS=Macaca fascicularis GN=EZH2 PE=2 SV=1 | Back alignment and function description |
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Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 840 | ||||||
| 255548445 | 884 | enhancer of zeste, ezh, putative [Ricinu | 0.996 | 0.946 | 0.660 | 0.0 | |
| 224128312 | 812 | SET domain protein [Populus trichocarpa] | 0.957 | 0.990 | 0.706 | 0.0 | |
| 225437573 | 906 | PREDICTED: histone-lysine N-methyltransf | 0.998 | 0.926 | 0.665 | 0.0 | |
| 356501867 | 868 | PREDICTED: histone-lysine N-methyltransf | 0.984 | 0.952 | 0.603 | 0.0 | |
| 356534774 | 869 | PREDICTED: histone-lysine N-methyltransf | 0.965 | 0.933 | 0.601 | 0.0 | |
| 449515891 | 889 | PREDICTED: LOW QUALITY PROTEIN: histone- | 0.970 | 0.916 | 0.603 | 0.0 | |
| 449469026 | 889 | PREDICTED: histone-lysine N-methyltransf | 0.970 | 0.916 | 0.604 | 0.0 | |
| 357442237 | 829 | Histone-lysine N-methyltransferase EZA1 | 0.926 | 0.938 | 0.567 | 0.0 | |
| 34393752 | 814 | PHCLF3 [Petunia x hybrida] | 0.928 | 0.958 | 0.594 | 0.0 | |
| 350536471 | 829 | EZ1 protein [Solanum lycopersicum] gi|15 | 0.964 | 0.977 | 0.592 | 0.0 |
| >gi|255548445|ref|XP_002515279.1| enhancer of zeste, ezh, putative [Ricinus communis] gi|223545759|gb|EEF47263.1| enhancer of zeste, ezh, putative [Ricinus communis] | Back alignment and taxonomy information |
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Score = 1144 bits (2959), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 586/887 (66%), Positives = 688/887 (77%), Gaps = 50/887 (5%)
Query: 1 MVSRASDSSSKSRKSYSEQSNDGLGNLTYKLNQLKKQVQAERVVSVKDKIEKNRKKIEND 60
M+S+++DS SK RKS+ EQSN+ +GNL+YK+N LKKQ+QAER+ S+K+K+E NRKK+E+D
Sbjct: 1 MLSKSTDSVSKLRKSHGEQSNECIGNLSYKMNLLKKQIQAERIFSIKEKVENNRKKLESD 60
Query: 61 ISQLLSTTSRKSVIFAMDNGFGNM--PLCKYSGFPQGLGDRDYVNSHEVVLSTSSKLSHV 118
++Q++ +SR + F + PLCKYSGF QG GD+DY+N HEV+ TS+K+ V
Sbjct: 61 VAQIMLASSRIDALNIGQTNFSRIGSPLCKYSGFAQGSGDKDYINGHEVIPWTSTKIPFV 120
Query: 119 QKIPPYTTWIFLDKNQRMAEDQSVVGRRRIYYDQHGSEALVCSDSEEDIIEPEEEKHEFS 178
++IPPYTTWIFLD+NQRMAEDQSVVGRRRIYYDQ+G+EAL+CSDSEEDI EPEEEKH+FS
Sbjct: 121 ERIPPYTTWIFLDRNQRMAEDQSVVGRRRIYYDQNGNEALICSDSEEDIAEPEEEKHDFS 180
Query: 179 DGEDRILWTVFEEHGLGEEVINAVSQFIGIATSEVQDRYSTLKEKYDG-KNLKEFEDAGH 237
+GEDRILW VF+EHGL EEV+N VSQFIG+ S++Q+R S LKE++D +N K+ D+
Sbjct: 181 EGEDRILWMVFQEHGLAEEVLNIVSQFIGVPISDIQERCSMLKERFDEEQNGKDSGDSAS 240
Query: 238 ERGIALEKSLSAALDSFDNLFCRRCLLFDCRLHGCSQTLINPS----------------- 280
E+GI+LEKSLSAALDSFDNLFCRRCLLFDCRLHGCSQ LINPS
Sbjct: 241 EKGISLEKSLSAALDSFDNLFCRRCLLFDCRLHGCSQALINPSEKQPYWSEYEDDRKPCS 300
Query: 281 -------RAVQDTVEGS---AGNISSIITNTEG--TLLHCNAEVPGAH---SDIMAGERC 325
+ V+D E S A N + EG T NA+ P +D+ +
Sbjct: 301 DQCFLRLKVVRDLPESSVNCALNRMKTASLEEGKKTAGASNAQEPSGADDGADLSKDDSY 360
Query: 326 NSKRVLPVTSEAVDSSEVAIGNENTDT-----SMQSLGKRKA-----LELNDSVKVFDEI 375
S++ + V S + SE + + N DT + + + KRK ++L+DS V ++
Sbjct: 361 ISQKEISVASGTLCHSEASEAS-NLDTCAMIHNQEHMRKRKEPELTNVDLDDSTPVPSDL 419
Query: 376 EESLNKKQKKLLPLDVLTASSDGIPRPDTKSGHHVGAINDNELQMTSKNTIKK--SVSAK 433
S NKKQK+LL D + + I D +G + +ELQ+T+KNT+ ++K
Sbjct: 420 HNSSNKKQKRLLGSDAASKDIENISSLDDLAGTE-KTTDTSELQITTKNTLNNPSEYASK 478
Query: 434 VVSHNNIEHNIMDGAKDVNKEPEMKQSFSKGELPEGVLCSSEWKPIEKELYLKGVEIFGR 493
+ + IE I+D A D K PE+ QS S EGVL S WKPIEKELYLKGVEIFG+
Sbjct: 479 EIVSSAIE-KILDEANDATKGPELIQSSSTDRQLEGVLSRSRWKPIEKELYLKGVEIFGK 537
Query: 494 NSCLIARNLLSGLKTCMEVSTYMRDSSSSMPHKSVAPSSFLEETVKVDTDYAEQEMPARP 553
NSCLIARNLLSGLKTCMEVS YM DS ++PHKSVAPSS L++ K DTDY EQE+ R
Sbjct: 538 NSCLIARNLLSGLKTCMEVSNYMCDSGVTVPHKSVAPSSILDDNGKTDTDYTEQEISTRS 597
Query: 554 RLLRRRGRARKLKYSWKSAGHPSIWKRIADGKNQSCKQYTPCGCQSMCGKQCPCLHNGTC 613
RLLR+RGR RKLKYSWKSAGHP+ WKRIADGKNQSCKQYTPCGCQSMCGKQCPCLHNGTC
Sbjct: 598 RLLRKRGRTRKLKYSWKSAGHPASWKRIADGKNQSCKQYTPCGCQSMCGKQCPCLHNGTC 657
Query: 614 CEKYCGCSKSCKNRFRGCHCAKSQCRSRQCPCFAAGRECDPDVCRNCWVSCGDGSLGEPP 673
CEKYCGCSKSCKNRFRGCHCAKSQCRSRQCPCFAAGRECDPDVCRNCWVSCGD SLGEPP
Sbjct: 658 CEKYCGCSKSCKNRFRGCHCAKSQCRSRQCPCFAAGRECDPDVCRNCWVSCGDSSLGEPP 717
Query: 674 KRGDGQCGNMRLLLRQQQRILLAKSDVAGWGAFLKNSVSKNDYLGEYTGELISHREADKR 733
KRGDGQCGNMRLLLRQQQRILLAKS++AGWGAFLKN V+KNDYLGEYTGELISHREADKR
Sbjct: 718 KRGDGQCGNMRLLLRQQQRILLAKSNIAGWGAFLKNPVNKNDYLGEYTGELISHREADKR 777
Query: 734 GKIYDRANSSFLFDLNDQYVLDAYRKGDKLKFANHSSNPNCFAKVMLVAGDHRVGIFAKE 793
GKIYDRANSSFLFDLN+QYVLDAYRKGDKLKFANHSSNPNC+AKVMLVAGDHRVGIFAKE
Sbjct: 778 GKIYDRANSSFLFDLNEQYVLDAYRKGDKLKFANHSSNPNCYAKVMLVAGDHRVGIFAKE 837
Query: 794 HIEASEELFYDYRYGPDQAPAWARKPEGSKREDSSVSQGRAKKHQSH 840
HIEASEELFYDYRYGPDQAPAWARKPEGS+R++S+VSQGRAKKHQSH
Sbjct: 838 HIEASEELFYDYRYGPDQAPAWARKPEGSRRDESTVSQGRAKKHQSH 884
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Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224128312|ref|XP_002320296.1| SET domain protein [Populus trichocarpa] gi|222861069|gb|EEE98611.1| SET domain protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|225437573|ref|XP_002270605.1| PREDICTED: histone-lysine N-methyltransferase EZA1-like [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|356501867|ref|XP_003519745.1| PREDICTED: histone-lysine N-methyltransferase EZA1-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|356534774|ref|XP_003535927.1| PREDICTED: histone-lysine N-methyltransferase EZA1-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|449515891|ref|XP_004164981.1| PREDICTED: LOW QUALITY PROTEIN: histone-lysine N-methyltransferase EZA1-like [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|449469026|ref|XP_004152222.1| PREDICTED: histone-lysine N-methyltransferase EZA1-like [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|357442237|ref|XP_003591396.1| Histone-lysine N-methyltransferase EZA1 [Medicago truncatula] gi|355480444|gb|AES61647.1| Histone-lysine N-methyltransferase EZA1 [Medicago truncatula] | Back alignment and taxonomy information |
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| >gi|34393752|dbj|BAC84952.1| PHCLF3 [Petunia x hybrida] | Back alignment and taxonomy information |
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| >gi|350536471|ref|NP_001234760.1| EZ1 protein [Solanum lycopersicum] gi|156789072|gb|ABU96077.1| EZ1 [Solanum lycopersicum] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 840 | ||||||
| TAIR|locus:2132178 | 856 | SWN "SWINGER" [Arabidopsis tha | 0.955 | 0.938 | 0.543 | 8.1e-234 | |
| TAIR|locus:2005501 | 902 | CLF "CURLY LEAF" [Arabidopsis | 0.667 | 0.621 | 0.477 | 2.4e-179 | |
| TAIR|locus:2196110 | 689 | MEA "MEDEA" [Arabidopsis thali | 0.405 | 0.494 | 0.508 | 3.1e-124 | |
| ZFIN|ZDB-GENE-050114-1 | 749 | ezh1 "enhancer of zeste homolo | 0.282 | 0.316 | 0.486 | 2.7e-78 | |
| UNIPROTKB|E1BD02 | 751 | EZH2 "Uncharacterized protein" | 0.275 | 0.307 | 0.491 | 4.7e-71 | |
| UNIPROTKB|E2R6Q2 | 751 | EZH2 "Uncharacterized protein" | 0.275 | 0.307 | 0.491 | 4.7e-71 | |
| UNIPROTKB|Q15910 | 746 | EZH2 "Histone-lysine N-methylt | 0.275 | 0.309 | 0.491 | 9.6e-71 | |
| UNIPROTKB|Q4R381 | 746 | EZH2 "Histone-lysine N-methylt | 0.275 | 0.309 | 0.491 | 9.6e-71 | |
| UNIPROTKB|I3L7H6 | 737 | EZH2 "Uncharacterized protein" | 0.275 | 0.313 | 0.491 | 1.2e-70 | |
| UNIPROTKB|E1C0W5 | 761 | EZH2 "Uncharacterized protein" | 0.275 | 0.303 | 0.491 | 1.2e-70 |
| TAIR|locus:2132178 SWN "SWINGER" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2255 (798.9 bits), Expect = 8.1e-234, P = 8.1e-234
Identities = 460/846 (54%), Positives = 567/846 (67%)
Query: 22 DGLGNLTYKLNQLKKQVQAERVVSVKDKIEKNRKKIENDISQLLSTTSRKSVIFAMDNGF 81
D L L +L++LK+++Q ERV S+K+K E NRKK++ +S S S ++ A DNG
Sbjct: 27 DRLEGLENRLSELKRKIQGERVRSIKEKFEANRKKVDAHVSPFSSAASSRAT--AEDNGN 84
Query: 82 GNM-------PLCKYSGFPQGLGDRDYVNSHEVVLSTSSKLSHVQKIPPYTTWIFLDKNQ 134
NM PLCK +GF G+GDRDYV + +V+ S S KL ++IPPYTTWIFLD+NQ
Sbjct: 85 SNMLSSRMRMPLCKLNGFSHGVGDRDYVPTKDVI-SASVKLPIAERIPPYTTWIFLDRNQ 143
Query: 135 RMAEDQSVVGRRRIYYDQHGSEALVCXXXXXXXXXXXXXKHEFSDGEDRILWTVFEEHGL 194
RMAEDQSVVGRR+IYY+QHG E L+C K EFS+GED I+W + +E+G+
Sbjct: 144 RMAEDQSVVGRRQIYYEQHGGETLICSDSEEEPEPEEE-KREFSEGEDSIIWLIGQEYGM 202
Query: 195 GEEVINAVSQFIGIATSEVQDRYSTLKEKYDGKNLKEFEDAGHERGIALEKSLSAALDSF 254
GEEV +A+ Q + + S++ +RY+ LK K D +N +EF ++G + GI+LEK L AALDSF
Sbjct: 203 GEEVQDALCQLLSVDASDILERYNELKLK-DKQNTEEFSNSGFKLGISLEKGLGAALDSF 261
Query: 255 DNLFCRRCLLFDCRLHGCSQTLINPSRAVQDTVEGSAGNISSIITNTEGTLLHCNAEVPG 314
DNLFCRRCL+FDCRLHGCSQ LI+ S Q G+ + L EVP
Sbjct: 262 DNLFCRRCLVFDCRLHGCSQPLISASEK-QPYWSDYEGDRKPCSKHCY-LQLKAVREVPE 319
Query: 315 AHSDIM--AGERCNSKRVLPVTSEAVD---SSEVAIGNENTDTSMQSLGKRKALELNDSV 369
S+ A E+ + + S V +S V++ E TD ++++ +E +
Sbjct: 320 TCSNFASKAEEKASEEECSKAVSSDVPHAAASGVSLQVEKTDIGIKNVDSSSGVEQEHGI 379
Query: 370 KVFDEI---EES-----LNKKQKKLLPLDVLTASSDGIPRPD-----TKSGHHVGAINDN 416
+ E+ ++S L+ K++K D + + +P D TK G DN
Sbjct: 380 RGKREVPILKDSNDLPNLSNKKQKTAASDTKMSFVNSVPSLDQALDSTKGDQ--GGTTDN 437
Query: 417 ELQMTSKNTIKKSVSAKVVSHNNIEHNIMDGAKDVNK--EPEMKQSFSKGELPEGVLCSS 474
++ S+ AK V ++++ DG + + + E+ E S+
Sbjct: 438 KVNRDSE------ADAKEVGEPIPDNSVHDGGSSICQPHHGSGNGAIIIAEMSETSRPST 491
Query: 475 EWKPIEKELYLKGVEIFGRNSCLIARNLLSGLKTCMEVSTYMRDSSSSMPHKSVAPSSFL 534
EW PIEK+LYLKGVEIFGRNSCLIARNLLSGLKTC++VS YMR++ S+ +S P+ L
Sbjct: 492 EWNPIEKDLYLKGVEIFGRNSCLIARNLLSGLKTCLDVSNYMRENEVSVFRRSSTPNLLL 551
Query: 535 EETVKVDTDYAEQEMXXXXXXXXXXXXXXKLKYSWKSAGHPSIWKRIADGKNQSCKQYTP 594
++ + D E+ KLKYS KSAGHPS+WKRIA GKNQSCKQYTP
Sbjct: 552 DDG-RTDPGNDNDEVPPRTRLFRRKGKTRKLKYSTKSAGHPSVWKRIAGGKNQSCKQYTP 610
Query: 595 CGCQSMCGKQCPCLHNGTCCEKYCGCSKSCKNRFRGCHCAKSQCRSRQCPCFAAGRECDP 654
CGC SMCGK CPCL N TCCEKYCGCSKSCKNRFRGCHCAKSQCRSRQCPCFAAGRECDP
Sbjct: 611 CGCLSMCGKDCPCLTNETCCEKYCGCSKSCKNRFRGCHCAKSQCRSRQCPCFAAGRECDP 670
Query: 655 DVCRNCWVSCGDGSLGEPPKRGDGQCGNMXXXXXXXXXXXXAKSDVAGWGAFLKNSVSKN 714
DVCRNCWVSCGDGSLGE P+RG+GQCGNM KSDVAGWGAFLKNSVSKN
Sbjct: 671 DVCRNCWVSCGDGSLGEAPRRGEGQCGNMRLLLRQQQRILLGKSDVAGWGAFLKNSVSKN 730
Query: 715 DYLGEYTGELISHREADKRGKIYDRANSSFLFDLNDQYVLDAYRKGDKLKFANHSSNPNC 774
+YLGEYTGELISH EADKRGKIYDRANSSFLFDLNDQYVLDA RKGDKLKFANHS+ PNC
Sbjct: 731 EYLGEYTGELISHHEADKRGKIYDRANSSFLFDLNDQYVLDAQRKGDKLKFANHSAKPNC 790
Query: 775 FAKVMLVAGDHRVGIFAKEHIEASEELFYDYRYGPDQAPAWARKPEGSKREDSSVSQGRA 834
+AKVM VAGDHRVGIFA E IEASEELFYDYRYGPDQAP WARKPEGSK++DS+++ RA
Sbjct: 791 YAKVMFVAGDHRVGIFANERIEASEELFYDYRYGPDQAPVWARKPEGSKKDDSAITHRRA 850
Query: 835 KKHQSH 840
+KHQSH
Sbjct: 851 RKHQSH 856
|
|
| TAIR|locus:2005501 CLF "CURLY LEAF" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2196110 MEA "MEDEA" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| ZFIN|ZDB-GENE-050114-1 ezh1 "enhancer of zeste homolog 1 (Drosophila)" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|E1BD02 EZH2 "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|E2R6Q2 EZH2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q15910 EZH2 "Histone-lysine N-methyltransferase EZH2" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q4R381 EZH2 "Histone-lysine N-methyltransferase EZH2" [Macaca fascicularis (taxid:9541)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|I3L7H6 EZH2 "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|E1C0W5 EZH2 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q8S4P4 | EZ3_MAIZE | 2, ., 1, ., 1, ., 4, 3 | 0.5090 | 0.9297 | 0.8726 | N/A | no |
| Q9ZSM8 | EZA1_ARATH | 2, ., 1, ., 1, ., 4, 3 | 0.5707 | 0.9345 | 0.9170 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 2.1.1.43 | 0.946 |
| 3rd Layer | 2.1.1 | 0.963 |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 840 | |||
| smart00317 | 124 | smart00317, SET, SET (Su(var)3-9, Enhancer-of-zest | 3e-36 | |
| pfam00856 | 113 | pfam00856, SET, SET domain | 1e-24 | |
| COG2940 | 480 | COG2940, COG2940, Proteins containing SET domain [ | 3e-12 | |
| pfam03638 | 42 | pfam03638, CXC, Tesmin/TSO1-like CXC domain | 2e-04 | |
| pfam00757 | 143 | pfam00757, Furin-like, Furin-like cysteine rich re | 0.003 |
| >gnl|CDD|214614 smart00317, SET, SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain | Back alignment and domain information |
|---|
Score = 132 bits (334), Expect = 3e-36
Identities = 47/118 (39%), Positives = 68/118 (57%), Gaps = 2/118 (1%)
Query: 692 RILLAKSDVAGWGAFLKNSVSKNDYLGEYTGELISHREADKRGKIYDR--ANSSFLFDLN 749
++ + KS GWG + K +++GEY GE+I+ EA++R K YD A + +LFD++
Sbjct: 2 KLEVFKSPGKGWGVRATEDIPKGEFIGEYVGEIITSEEAEERPKAYDTDGAKAFYLFDID 61
Query: 750 DQYVLDAYRKGDKLKFANHSSNPNCFAKVMLVAGDHRVGIFAKEHIEASEELFYDYRY 807
+DA RKG+ +F NHS PNC + V GD R+ IFA I+ EEL DY
Sbjct: 62 SDLCIDARRKGNLARFINHSCEPNCELLFVEVNGDDRIVIFALRDIKPGEELTIDYGS 119
|
Putative methyl transferase, based on outlier plant homologues. Length = 124 |
| >gnl|CDD|216155 pfam00856, SET, SET domain | Back alignment and domain information |
|---|
| >gnl|CDD|225491 COG2940, COG2940, Proteins containing SET domain [General function prediction only] | Back alignment and domain information |
|---|
| >gnl|CDD|202712 pfam03638, CXC, Tesmin/TSO1-like CXC domain | Back alignment and domain information |
|---|
| >gnl|CDD|216103 pfam00757, Furin-like, Furin-like cysteine rich region | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 840 | |||
| KOG1079 | 739 | consensus Transcriptional repressor EZH1 [Transcri | 100.0 | |
| KOG4442 | 729 | consensus Clathrin coat binding protein/Huntingtin | 100.0 | |
| KOG1080 | 1005 | consensus Histone H3 (Lys4) methyltransferase comp | 99.96 | |
| KOG1082 | 364 | consensus Histone H3 (Lys9) methyltransferase SUV3 | 99.95 | |
| smart00317 | 116 | SET SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) | 99.9 | |
| KOG1083 | 1306 | consensus Putative transcription factor ASH1/LIN-5 | 99.89 | |
| KOG1141 | 1262 | consensus Predicted histone methyl transferase [Ch | 99.75 | |
| KOG1085 | 392 | consensus Predicted methyltransferase (contains a | 99.74 | |
| COG2940 | 480 | Proteins containing SET domain [General function p | 99.55 | |
| PF00856 | 162 | SET: SET domain; InterPro: IPR001214 The SET domai | 99.47 | |
| KOG1081 | 463 | consensus Transcription factor NSD1 and related SE | 98.88 | |
| KOG2589 | 453 | consensus Histone tail methylase [Chromatin struct | 98.57 | |
| KOG2461 | 396 | consensus Transcription factor BLIMP-1/PRDI-BF1, c | 98.11 | |
| PF00249 | 48 | Myb_DNA-binding: Myb-like DNA-binding domain; Inte | 93.1 | |
| PF13921 | 60 | Myb_DNA-bind_6: Myb-like DNA-binding domain; PDB: | 92.39 | |
| smart00717 | 49 | SANT SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-bindi | 92.35 | |
| smart00717 | 49 | SANT SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-bindi | 92.16 | |
| cd00167 | 45 | SANT 'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding do | 92.01 | |
| KOG1171 | 406 | consensus Metallothionein-like protein [Inorganic | 91.39 | |
| smart00570 | 51 | AWS associated with SET domains. subdomain of PRES | 89.75 | |
| KOG4442 | 729 | consensus Clathrin coat binding protein/Huntingtin | 89.74 | |
| cd00167 | 45 | SANT 'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding do | 88.89 | |
| PF03638 | 42 | TCR: Tesmin/TSO1-like CXC domain, cysteine-rich do | 87.66 | |
| PF09111 | 118 | SLIDE: SLIDE; InterPro: IPR015195 The SLIDE domain | 83.97 |
| >KOG1079 consensus Transcriptional repressor EZH1 [Transcription] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9e-127 Score=1070.87 Aligned_cols=689 Identities=36% Similarity=0.545 Sum_probs=541.1
Q ss_pred CcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhhhhcccccchhcccCCCC----Cc---CCccccCCCC
Q 003198 22 DGLGNLTYKLNQLKKQVQAERVVSVKDKIEKNRKKIENDISQLLSTTSRKSVIFAMDNGFG----NM---PLCKYSGFPQ 94 (840)
Q Consensus 22 ~~~~~L~~~i~~LKkqi~~~R~~~ik~k~e~n~~~l~~~~~~~~~~~~~~~~~~~~~~~~~----~~---~l~~~~g~~~ 94 (840)
+.++.+...+..+|+ ++..++.+++++-..++.+...+|+-+- +++.+. .......+ .| |++++||+..
T Consensus 37 ~~~e~i~~~~~E~k~-~~~~~~~~~~~~~~~~r~k~~~~~~~~~-~~~~~~--~i~~~n~~~~v~~~~~~~~~q~nfmv~ 112 (739)
T KOG1079|consen 37 DRLEKIKILNCEWKK-RRLKPVRSAKEVDGDIRVKVDLDTSIFD-FPSQKS--PINELNAVAQVPIMYSWPPLQQNFMVE 112 (739)
T ss_pred HHHHHHHHHHHHHhh-hhcccccccccccccccccccccccccc-Cccccc--chhhhcccccccccccCChhhhcceec
Confidence 456666666666666 7888888888888888888888888775 555532 22222222 22 9999999999
Q ss_pred CCCCCCcccccccccccccccccCCCCCCCceeEEeeccccccccccccccceeeEeCCCCeEEEecCCccccCCCcccc
Q 003198 95 GLGDRDYVNSHEVVLSTSSKLSHVQKIPPYTTWIFLDKNQRMAEDQSVVGRRRIYYDQHGSEALVCSDSEEDIIEPEEEK 174 (840)
Q Consensus 95 ~~~d~d~~~~~~v~~~~~iklp~v~klPpYTtWifldrNqrMaedqsvvgrrriYYd~~g~Ealicsdseee~~e~eeek 174 (840)
+..+.+++...++. +..||+|++|.|+|||+|||+||||||++||+|||+|+||| |.|||++| ||+||| ++++|||
T Consensus 113 ~~~~~~~ip~~~~~-v~~~k~~~ieel~~y~~~v~~dr~~~~~~d~v~ve~~~a~~-Q~~~e~dg-~D~~~e-~~~~~ek 188 (739)
T KOG1079|consen 113 DETVLHNIPYMGDE-VLDIKGPFIEELIKYDGKVHGDRNQRFMEDQVFVELVVALY-QYGGEHDG-SDDEEE-EVLEEEK 188 (739)
T ss_pred ccceeccccccccc-ccccccchhhhcccccceeeccccccchhhhhHHHHHHHHH-hcCCcccc-CCCccc-cchhhhc
Confidence 99999888877754 68899999999999999999999999999999999999999 99999999 999999 8889999
Q ss_pred ccCCcccch-hhhhHHhhcCChHHHHHHHHHHhc--CCcHHHHHHHHHhHhhcCCCCCccccccccccccchhhh-hhHH
Q 003198 175 HEFSDGEDR-ILWTVFEEHGLGEEVINAVSQFIG--IATSEVQDRYSTLKEKYDGKNLKEFEDAGHERGIALEKS-LSAA 250 (840)
Q Consensus 175 ~~f~~~ed~-~~~~~~~e~g~~~~v~~~l~~~~~--~~~sei~eRy~~L~~k~~~~~~~~~~~~~~~~~~~l~k~-l~~a 250 (840)
++|.+++|. ++|++.+..+++++||.+|+++|- ++++||+|||.+|+++..+...+...+.++. ++.+++. ++++
T Consensus 189 r~~~e~~~~~~~~~~~~~~~~~~~if~~~~~~f~~k~~~~~lke~~~~l~~~~~p~~~e~~~~~~id-~~~ae~~~r~~~ 267 (739)
T KOG1079|consen 189 RDFLEGEDDDIIESINKLSFPADKIFQAISSMFPDKLTASELKERYGELTSKSLPVAEEPECTPNID-GSSAEPVQREQA 267 (739)
T ss_pred ccccCcccchhhHhhhhhccchHHHHHHHhhhcccccchhhhhHHHhhhhhccccccCCcccccCCC-ccccChHHHHhh
Confidence 999999999 899999999999999999999995 9999999999999998655444444443443 4556665 9999
Q ss_pred hhcccccccccccccccCCcCcCCCccCCCCCCCCCCCCCCCCCCCCCCCccccccccccCCCCCCCccccccccCCccc
Q 003198 251 LDSFDNLFCRRCLLFDCRLHGCSQTLINPSRAVQDTVEGSAGNISSIITNTEGTLLHCNAEVPGAHSDIMAGERCNSKRV 330 (840)
Q Consensus 251 ldsfdnlFCRRClvfDC~lHgcsq~li~p~ekq~~~~~~~~~~~~~~pCg~~Cy~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (840)
|||||||||||||+||||||| +|.++||.++...|.++... ..|||+.||.+...+... +...+ +
T Consensus 268 l~sF~tlfCrrCl~ydC~lHg-~~~~~~pn~~~r~e~~~a~~---~~pc~p~~~~~l~~~~~~--~m~~~---------~ 332 (739)
T KOG1079|consen 268 LHSFHTLFCRRCLKYDCFLHG-SQFHAFPNTKKRKEDEPALE---NEPCGPGCYGLLEGAKEK--TMSAV---------V 332 (739)
T ss_pred hcccccceeeeeeeeeccccC-ccccccccccccCCCCcccc---ccCCCCchhhhhhccchh--hhhcc---------c
Confidence 999999999999999999999 99999999999999998876 999999999987532211 11101 0
Q ss_pred CCCcccccCCcccccCCCCCCcccccccccccccccCccchhhhHHHHHHHHhhhccccccccccCCCCCCCCCCCCCCc
Q 003198 331 LPVTSEAVDSSEVAIGNENTDTSMQSLGKRKALELNDSVKVFDEIEESLNKKQKKLLPLDVLTASSDGIPRPDTKSGHHV 410 (840)
Q Consensus 331 ~~~~s~~~~~~~~~~~~~~~~~~s~~~~~~~~~~l~~s~~~~~~~~~~~~k~~k~~~~~~~~~~~~~~~~~~d~~~~~~~ 410 (840)
+... ++. . .++||..-..+|++.+. |. ..+
T Consensus 333 -----~~~~----p~~------------g--------------------~~~qk~~~~~~~~s~~~--~~-------~~e 362 (739)
T KOG1079|consen 333 -----SKCP----PIR------------G--------------------DIRQKLVKASSMDSDDE--HV-------EEE 362 (739)
T ss_pred -----ccCC----CCc------------c--------------------hhhhhhcccccCCcchh--hc-------ccc
Confidence 0000 000 0 02233222222222111 00 000
Q ss_pred ccccccccccccccccccccccccccccccccccccCCccCCCCcccccCCCCCCCccccccCCCCcHHHHHHHHHhhhh
Q 003198 411 GAINDNELQMTSKNTIKKSVSAKVVSHNNIEHNIMDGAKDVNKEPEMKQSFSKGELPEGVLCSSEWKPIEKELYLKGVEI 490 (840)
Q Consensus 411 ~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~E~~L~~k~v~~ 490 (840)
+.-..+.....++ .++... -....++.........+.++...... ...+|+++|+.||++++.+
T Consensus 363 ~~g~~~d~~v~~~------~~~~~~-~v~~~~~~~~s~~~~~c~~~~~~~~~---------~~~ew~~~ek~~fr~~~~~ 426 (739)
T KOG1079|consen 363 DKGHDDDDGVPRG------FGGSVN-FVGEDDTSTHSSTNSICQNPVHGKKD---------TNVEWNGAEKVLFRVGSTL 426 (739)
T ss_pred ccCcccccccccc------cccccc-cccCCcccccccccccccCcccccCC---------cccccchhhhHHHHhcccc
Confidence 0000000111000 000000 00001122222222233322111111 2468999999999999999
Q ss_pred cCCchHHHHHhhhCCCCcHHHHHHHHhhcCCCCCCCCCCCCccccccccccchhhhhcCCCchhHHhhhhcccccccccC
Q 003198 491 FGRNSCLIARNLLSGLKTCMEVSTYMRDSSSSMPHKSVAPSSFLEETVKVDTDYAEQEMPARPRLLRRRGRARKLKYSWK 570 (840)
Q Consensus 491 fg~N~C~iA~~ll~g~KTC~EV~~ym~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~r~~r~~~r~rk~k~~~k 570 (840)
||.|+|+|||+| ++|||++||+||..+.... ++.... .......+.|+|.+|+.|+.|+..+.|+
T Consensus 427 ~~~n~c~Iar~l--~~ktC~~v~~~~~~e~~~~--------~~~~~~-----~~~~~~~~~r~~~~r~~g~~r~k~q~kk 491 (739)
T KOG1079|consen 427 YGTNRCSIARNL--LTKTCRQVYEYEQKEVLQG--------LYFDGR-----FRVELPGPKRARKLRLWGRHRRKIQNKK 491 (739)
T ss_pred ccchhhHHHHHh--cchHHHHHHHHhhcchhhc--------eecccc-----cccccCcchhhHHHHhhhhHHHhhhccc
Confidence 999999999999 4599999999999765311 111100 0001234556888999999999999999
Q ss_pred CCCCCccchhcccCCcCCCccccCCCCCCCC--CCCCcccCCCccccCCCCCCcccccccCCcccCCCCccCCCcccccc
Q 003198 571 SAGHPSIWKRIADGKNQSCKQYTPCGCQSMC--GKQCPCLHNGTCCEKYCGCSKSCKNRFRGCHCAKSQCRSRQCPCFAA 648 (840)
Q Consensus 571 s~~~p~~~kri~~~k~~~~~~y~PC~c~~~C--~~~C~C~~~g~~Ce~~CgC~~~C~nRf~GC~C~~~~C~t~~CpC~~a 648 (840)
++.|+.+|. |+||+|+++| +.+|+|+.++++||++|+|+.+|.|||+||+| ++||++++|||++|
T Consensus 492 ~~~~~~v~~------------~qpC~hp~~c~c~~~C~C~~n~~~CEk~C~C~~dC~nrF~GC~C-k~QC~tkqCpC~~A 558 (739)
T KOG1079|consen 492 DSRHTVVWN------------YQPCDHPGPCNCGVGCPCIDNETFCEKFCYCSPDCRNRFPGCRC-KAQCNTKQCPCYLA 558 (739)
T ss_pred ccCCceeee------------cCcccCCCCCCCCCCCcccccCcchhhcccCCHHHHhcCCCCCc-ccccccCcCchhhh
Confidence 999977774 7777777554 68999999999999999999999999999999 99999999999999
Q ss_pred ccccCCCCCCCCccCCCCCCCCCCCCCCCC-CCCchHhhhcccccEEEEecCCCCceEEeccccCCCCeEEeccccccCH
Q 003198 649 GRECDPDVCRNCWVSCGDGSLGEPPKRGDG-QCGNMRLLLRQQQRILLAKSDVAGWGAFLKNSVSKNDYLGEYTGELISH 727 (840)
Q Consensus 649 ~rECdPd~C~~C~~~Cg~~~l~~p~~~~~~-~C~N~~lq~g~~~~v~V~kS~~kG~GLfA~edI~kGefI~EY~GEIIs~ 727 (840)
+|||||++|..||+ + +..+++. .|+|+.+|+++++++.|++|.+.|||||+++.+.|++||.||+||+|++
T Consensus 559 ~rECdPd~Cl~cg~-~-------~~~d~~~~~C~N~~l~~~~qkr~llapSdVaGwGlFlKe~v~KnefisEY~GE~IS~ 630 (739)
T KOG1079|consen 559 VRECDPDVCLMCGN-V-------DHFDSSKISCKNTNLQRGEQKRVLLAPSDVAGWGLFLKESVSKNEFISEYTGEIISH 630 (739)
T ss_pred ccccCchHHhccCc-c-------cccccCccccccchhhhhhhcceeechhhccccceeeccccCCCceeeeecceeccc
Confidence 99999999999986 1 2233444 9999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhhcccCccccccCCCcEEEeccccCCccccccCCCCCCcceeEEEEcCeeEEEEEEccCCCCCCeEEEecCC
Q 003198 728 READKRGKIYDRANSSFLFDLNDQYVLDAYRKGDKLKFANHSSNPNCFAKVMLVAGDHRVGIFAKEHIEASEELFYDYRY 807 (840)
Q Consensus 728 ~Ea~rR~k~yd~~~~sYlf~L~~~~~IDA~~~GN~aRFINHSC~PNc~~~~v~V~g~~rI~ifA~RdI~aGEELTfDYgy 807 (840)
+||++|+++|+..+.+|+|+|+.+++|||+++||.+||+|||-+|||++++++|+|++||||||+|.|.+||||||||+|
T Consensus 631 dEADrRGkiYDr~~cSflFnln~dyviDs~rkGnk~rFANHS~nPNCYAkvm~V~GdhRIGifAkRaIeagEELffDYrY 710 (739)
T KOG1079|consen 631 DEADRRGKIYDRYMCSFLFNLNNDYVIDSTRKGNKIRFANHSFNPNCYAKVMMVAGDHRIGIFAKRAIEAGEELFFDYRY 710 (739)
T ss_pred hhhhhcccccccccceeeeeccccceEeeeeecchhhhccCCCCCCcEEEEEEecCCcceeeeehhhcccCceeeeeecc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCccccCCCCCCCCCCCCcccccccc
Q 003198 808 GPDQAPAWARKPEGSKREDSSVSQGRAKK 836 (840)
Q Consensus 808 ~~d~~pcwc~~pe~~~~d~~~~s~gra~k 836 (840)
+.+.++-|-+.+..+++++....+.+++|
T Consensus 711 s~~~~~k~~~~~~~s~k~e~~~~q~~~~~ 739 (739)
T KOG1079|consen 711 SPEHALKFVGIERESYKVELKIFQATQQK 739 (739)
T ss_pred CccccccccccCccccccchhhhhhhcCC
Confidence 99999999999999999998888888775
|
|
| >KOG4442 consensus Clathrin coat binding protein/Huntingtin interacting protein HIP1, involved in regulation of endocytosis [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >KOG1080 consensus Histone H3 (Lys4) methyltransferase complex, subunit SET1 and related methyltransferases [Chromatin structure and dynamics; Transcription] | Back alignment and domain information |
|---|
| >KOG1082 consensus Histone H3 (Lys9) methyltransferase SUV39H1/Clr4, required for transcriptional silencing [Chromatin structure and dynamics; Transcription] | Back alignment and domain information |
|---|
| >smart00317 SET SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain | Back alignment and domain information |
|---|
| >KOG1083 consensus Putative transcription factor ASH1/LIN-59 [Transcription] | Back alignment and domain information |
|---|
| >KOG1141 consensus Predicted histone methyl transferase [Chromatin structure and dynamics] | Back alignment and domain information |
|---|
| >KOG1085 consensus Predicted methyltransferase (contains a SET domain) [General function prediction only] | Back alignment and domain information |
|---|
| >COG2940 Proteins containing SET domain [General function prediction only] | Back alignment and domain information |
|---|
| >PF00856 SET: SET domain; InterPro: IPR001214 The SET domain appears generally as one part of a larger multidomain protein, and recently there were described three structures of very different proteins with distinct domain compositions: Neurospora crassa DIM-5, a member of the Su(var) family of HKMTs which methylate histone H3 on lysine 9,human SET7 (also called SET9), which methylates H3 on lysine 4 and garden pea Rubisco LSMT, an enzyme that does not modify histones, but instead methylates lysine 14 in the flexible tail of the large subunit of the enzyme Rubisco | Back alignment and domain information |
|---|
| >KOG1081 consensus Transcription factor NSD1 and related SET domain proteins [Transcription] | Back alignment and domain information |
|---|
| >KOG2589 consensus Histone tail methylase [Chromatin structure and dynamics] | Back alignment and domain information |
|---|
| >KOG2461 consensus Transcription factor BLIMP-1/PRDI-BF1, contains C2H2-type Zn-finger and SET domains [Transcription] | Back alignment and domain information |
|---|
| >PF00249 Myb_DNA-binding: Myb-like DNA-binding domain; InterPro: IPR014778 The retroviral oncogene v-myb, and its cellular counterpart c-myb, encode nuclear DNA-binding proteins | Back alignment and domain information |
|---|
| >PF13921 Myb_DNA-bind_6: Myb-like DNA-binding domain; PDB: 1A5J_A 1MBH_A 1GV5_A 1H89_C 1IDY_A 1MBK_A 1IDZ_A 1H88_C 1GVD_A 1MBG_A | Back alignment and domain information |
|---|
| >smart00717 SANT SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains | Back alignment and domain information |
|---|
| >smart00717 SANT SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains | Back alignment and domain information |
|---|
| >cd00167 SANT 'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding domains | Back alignment and domain information |
|---|
| >KOG1171 consensus Metallothionein-like protein [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
| >smart00570 AWS associated with SET domains | Back alignment and domain information |
|---|
| >KOG4442 consensus Clathrin coat binding protein/Huntingtin interacting protein HIP1, involved in regulation of endocytosis [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >cd00167 SANT 'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding domains | Back alignment and domain information |
|---|
| >PF03638 TCR: Tesmin/TSO1-like CXC domain, cysteine-rich domain; InterPro: IPR005172 This entry includes proteins that have two copies of a cysteine rich motif as follows: C-X-C-X4-C-X3-YC-X-C-X6-C-X3-C-X-C-X2-C | Back alignment and domain information |
|---|
| >PF09111 SLIDE: SLIDE; InterPro: IPR015195 The SLIDE domain adopts a secondary structure comprising a main core of three alpha-helices | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 840 | ||||
| 2w5y_A | 192 | Binary Complex Of The Mixed Lineage Leukaemia (Mll1 | 7e-16 | ||
| 2r3a_A | 300 | Methyltransferase Domain Of Human Suppressor Of Var | 2e-14 | ||
| 3ope_A | 222 | Structural Basis Of Auto-Inhibitory Mechanism Of Hi | 4e-14 | ||
| 3ooi_A | 232 | Crystal Structure Of Human Histone-Lysine N-Methylt | 2e-13 | ||
| 4fmu_A | 278 | Crystal Structure Of Methyltransferase Domain Of Hu | 5e-13 | ||
| 2o8j_A | 281 | Human Euchromatic Histone Methyltransferase 2 Lengt | 2e-10 | ||
| 3k5k_A | 283 | Discovery Of A 2,4-Diamino-7-Aminoalkoxy-Quinazolin | 2e-10 | ||
| 1mvh_A | 299 | Structure Of The Set Domain Histone Lysine Methyltr | 4e-10 | ||
| 2igq_A | 285 | Human Euchromatic Histone Methyltransferase 1 Lengt | 8e-10 | ||
| 3hna_A | 287 | Crystal Structure Of Catalytic Domain Of Human Euch | 9e-10 | ||
| 3fpd_A | 261 | G9a-Like Protein Lysine Methyltransferase Inhibitio | 1e-09 | ||
| 3bo5_A | 290 | Crystal Structure Of Methyltransferase Domain Of Hu | 4e-09 | ||
| 4i51_A | 286 | Methyltransferase Domain Of Human Euchromatic Histo | 5e-09 | ||
| 4ij8_A | 165 | Crystal Structure Of The Complex Of Setd8 With Sam | 6e-08 | ||
| 1zkk_A | 167 | Crystal Structure Of Hset8 In Ternary Complex With | 1e-07 | ||
| 2bqz_A | 161 | Crystal Structure Of A Ternary Complex Of The Human | 2e-07 | ||
| 3f9z_A | 166 | Structural Insights Into Lysine Multiple Methylatio | 4e-07 | ||
| 3f9w_A | 166 | Structural Insights Into Lysine Multiple Methylatio | 4e-07 | ||
| 1ml9_A | 302 | Structure Of The Neurospora Set Domain Protein Dim- | 1e-05 | ||
| 1xqh_A | 264 | Crystal Structure Of A Ternary Complex Of The Methy | 7e-04 | ||
| 3cbm_A | 256 | Set79-Er-Adomet Complex Length = 256 | 8e-04 | ||
| 1o9s_A | 259 | Crystal Structure Of A Ternary Complex Of The Human | 8e-04 | ||
| 2f69_A | 261 | Ternary Complex Of Set79 BOUND TO ADOHCY AND A TAF1 | 9e-04 | ||
| 4e47_A | 264 | Set79 IN COMPLEX WITH INHIBITOR (R)-(3-(3-Cyanophen | 9e-04 |
| >pdb|2W5Y|A Chain A, Binary Complex Of The Mixed Lineage Leukaemia (Mll1) Set Domain With The Cofactor Product S-Adenosylhomocysteine. Length = 192 | Back alignment and structure |
|
| >pdb|2R3A|A Chain A, Methyltransferase Domain Of Human Suppressor Of Variegation 3-9 Homolog 2 Length = 300 | Back alignment and structure |
| >pdb|3OPE|A Chain A, Structural Basis Of Auto-Inhibitory Mechanism Of Histone Methyltransferase Length = 222 | Back alignment and structure |
| >pdb|3OOI|A Chain A, Crystal Structure Of Human Histone-Lysine N-Methyltransferase Nsd1 Set Domain In Complex With S-Adenosyl-L-Methionine Length = 232 | Back alignment and structure |
| >pdb|4FMU|A Chain A, Crystal Structure Of Methyltransferase Domain Of Human Set Domain- Containing Protein 2 Compound: Pr-Snf Length = 278 | Back alignment and structure |
| >pdb|2O8J|A Chain A, Human Euchromatic Histone Methyltransferase 2 Length = 281 | Back alignment and structure |
| >pdb|3K5K|A Chain A, Discovery Of A 2,4-Diamino-7-Aminoalkoxy-Quinazoline As A Potent Inhibitor Of Histone Lysine Methyltransferase, G9a Length = 283 | Back alignment and structure |
| >pdb|1MVH|A Chain A, Structure Of The Set Domain Histone Lysine Methyltransferase Clr4 Length = 299 | Back alignment and structure |
| >pdb|2IGQ|A Chain A, Human Euchromatic Histone Methyltransferase 1 Length = 285 | Back alignment and structure |
| >pdb|3HNA|A Chain A, Crystal Structure Of Catalytic Domain Of Human Euchromatic Histone Methyltransferase 1 In Complex With Sah And Mono- Methylated H3k9 Peptide Length = 287 | Back alignment and structure |
| >pdb|3FPD|A Chain A, G9a-Like Protein Lysine Methyltransferase Inhibition By Bix- 01294 Length = 261 | Back alignment and structure |
| >pdb|3BO5|A Chain A, Crystal Structure Of Methyltransferase Domain Of Human Histone-Lysine N-Methyltransferase Setmar Length = 290 | Back alignment and structure |
| >pdb|4I51|A Chain A, Methyltransferase Domain Of Human Euchromatic Histone Methyltransferase 1, Mutant Y1211a Length = 286 | Back alignment and structure |
| >pdb|4IJ8|A Chain A, Crystal Structure Of The Complex Of Setd8 With Sam Length = 165 | Back alignment and structure |
| >pdb|1ZKK|A Chain A, Crystal Structure Of Hset8 In Ternary Complex With H4 Peptide (16-24) And Adohcy Length = 167 | Back alignment and structure |
| >pdb|2BQZ|A Chain A, Crystal Structure Of A Ternary Complex Of The Human Histone Methyltransferase Pr-Set7 (Also Known As Set8) Length = 161 | Back alignment and structure |
| >pdb|3F9Z|A Chain A, Structural Insights Into Lysine Multiple Methylation By Set Domain Methyltransferases, Set8-Y245f H4-Lys20 ADOHCY Length = 166 | Back alignment and structure |
| >pdb|3F9W|A Chain A, Structural Insights Into Lysine Multiple Methylation By Set Domain Methyltransferases, Set8-Y334f H4-Lys20 ADOHCY Length = 166 | Back alignment and structure |
| >pdb|1ML9|A Chain A, Structure Of The Neurospora Set Domain Protein Dim-5, A Histone Lysine Methyltransferase Length = 302 | Back alignment and structure |
| >pdb|1XQH|A Chain A, Crystal Structure Of A Ternary Complex Of The Methyltransferase Set9 (Also Known As Set79) WITH A P53 Peptide And Sah Length = 264 | Back alignment and structure |
| >pdb|3CBM|A Chain A, Set79-Er-Adomet Complex Length = 256 | Back alignment and structure |
| >pdb|1O9S|A Chain A, Crystal Structure Of A Ternary Complex Of The Human Histone Methyltransferase Set79 Length = 259 | Back alignment and structure |
| >pdb|2F69|A Chain A, Ternary Complex Of Set79 BOUND TO ADOHCY AND A TAF10 Peptide Length = 261 | Back alignment and structure |
| >pdb|4E47|A Chain A, Set79 IN COMPLEX WITH INHIBITOR (R)-(3-(3-Cyanophenyl)-1-Oxo-1- (Pyrrolidin-1-Yl)propan-2-Yl)-1,2,3, 4-Tetrahydroisoquinoline-6- Sulfonamide And S-Adenosylmethionine Length = 264 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >3bo5_A Histone-lysine N-methyltransferase setmar; SET domain, chromati regulator, DNA damage, DNA repair, DNA-binding, nucleus, ST genomics; HET: SAH; 1.59A {Homo sapiens} Length = 290 | Back alignment and structure |
|---|
Score = 162 bits (411), Expect = 8e-45
Identities = 48/223 (21%), Positives = 78/223 (34%), Gaps = 33/223 (14%)
Query: 624 CKNRFRGCHCAKSQCRSRQCPCFAAGRECDPDVCRN--------------CWVSCGDGSL 669
+ F GC C K+ C C C G D + C C V C
Sbjct: 55 TQITFPGCICVKTPCLPGTCSCLRHGENYDDNSCLRDIGSGGKYAEPVFECNVLCRCSD- 113
Query: 670 GEPPKRGDGQCGNMRLLLRQQQRILLAKSDVAGWGAFLKNSVSKNDYLGEYTGELISHRE 729
C N + Q + K+ GWG + K ++ EY GE++ E
Sbjct: 114 ---------HCRNRVVQKGLQFHFQVFKTHKKGWGLRTLEFIPKGRFVCEYAGEVLGFSE 164
Query: 730 ADKRGKIYDRANSSFLFDLNDQ--------YVLDAYRKGDKLKFANHSSNPNCFAKVMLV 781
+R + +++S+++ + + +D G+ +F NHS PN + +
Sbjct: 165 VQRRIHLQTKSDSNYIIAIREHVYNGQVMETFVDPTYIGNIGRFLNHSCEPNLLMIPVRI 224
Query: 782 AGD-HRVGIFAKEHIEASEELFYDYRYGPDQAPAWARKPEGSK 823
++ +FA + I EEL YDY A K
Sbjct: 225 DSMVPKLALFAAKDIVPEEELSYDYSGRYLNLTVSASKERLDH 267
|
| >3ooi_A Histone-lysine N-methyltransferase, H3 lysine-36 lysine-20 specific; SET domain, S-adenosyl-L methionine; HET: SAM; 1.75A {Homo sapiens} Length = 232 | Back alignment and structure |
|---|
| >3ope_A Probable histone-lysine N-methyltransferase ASH1L; SET, nucleus; HET: SAM; 2.90A {Homo sapiens} Length = 222 | Back alignment and structure |
|---|
| >2w5y_A Histone-lysine N-methyltransferase HRX; transcription regulation, chromosomal rearrangement, protein lysine methyltransferase, proto-oncogene; HET: SAH; 2.00A {Homo sapiens} PDB: 2w5z_A* Length = 192 | Back alignment and structure |
|---|
| >3f9x_A Histone-lysine N-methyltransferase SETD8; methyltransferase, SET, lysine, alternative splicing, cell cycle, cell division, chromatin regulator, chromosomal protein, coiled coil; HET: MLY SAH; 1.25A {Homo sapiens} PDB: 3f9w_A* 3f9y_A* 3f9z_A* 1zkk_A* 2bqz_A* Length = 166 | Back alignment and structure |
|---|
| >1mvh_A Cryptic LOCI regulator 4; lysine methyltransferase, CLR4, SET-domain; 2.30A {Schizosaccharomyces pombe} SCOP: b.85.7.1 PDB: 1mvx_A Length = 299 | Back alignment and structure |
|---|
| >2r3a_A Histone-lysine N-methyltransferase SUV39H2; histone H3-K9 methyltransferase 2, H3 lysine-9 specific 2, alternative splicing, cell cycle; HET: SAM; 2.00A {Homo sapiens} Length = 300 | Back alignment and structure |
|---|
| >2f69_A Histone-lysine N-methyltransferase, H3 lysine-4 specific SET7; SET domain, protein lysine methyltransferase, enzyme- peptide-adohcy complex; HET: MLZ SAH; 1.30A {Homo sapiens} SCOP: b.76.2.1 b.85.7.1 PDB: 3m53_A* 3m55_A* 3m54_A* 3m56_A* 3m58_A* 3m57_A* 3m59_A* 3m5a_A* 1xqh_A* 4e47_A* 1n6a_A* 1o9s_A* 3cbp_A* 3cbm_A* 3cbo_A* 3os5_A* Length = 261 | Back alignment and structure |
|---|
| >1ml9_A Histone H3 methyltransferase DIM-5; adoMet-dependent methyltransferase histone H3 lysine- 9 methylation; 1.98A {Neurospora crassa} SCOP: b.85.7.1 PDB: 1peg_A* Length = 302 | Back alignment and structure |
|---|
| >3hna_A Histone-lysine N-methyltransferase, H3 lysine-9 specific 5; EHMT1, structural genomics, SGC, structural genomics consortium, alternative splicing, ANK repeat; HET: MLZ SAH; 1.50A {Homo sapiens} PDB: 2rfi_A* 2igq_A* 3mo0_A* 3mo2_A* 3mo5_A* 3sw9_A* 3swc_A* 3fpd_A* 3k5k_A* 3nni_A* 3rjw_A* 2o8j_A* Length = 287 | Back alignment and structure |
|---|
| >1n3j_A A612L, histone H3 lysine methyltransferase; beta barrel, homodimer; NMR {Paramecium bursaria chlorella virus 1} SCOP: b.85.7.2 PDB: 2g46_A* 3kma_A 3kmj_A 3kmt_A* Length = 119 | Back alignment and structure |
|---|
| >3s8p_A Histone-lysine N-methyltransferase SUV420H1; SET domain, histone methyltransferase, transcription regulat histone lysine, SAM, methylation, nucleus; HET: MSE SAM; 1.85A {Homo sapiens} Length = 273 | Back alignment and structure |
|---|
| >3rq4_A Histone-lysine N-methyltransferase SUV420H2; suppressor, variegation 4-20 homolog 2, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.80A {Homo sapiens} Length = 247 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >3dal_A PR domain zinc finger protein 1; methyltransferase, PRDM1, structural genomics, structural genomics consortium, SGC, DNA-binding, metal-binding; 1.65A {Homo sapiens} Length = 196 | Back alignment and structure |
|---|
| >2qpw_A PR domain zinc finger protein 2; methyltransferase, activator, alternative initiation, alternative splicing, DNA-binding, metal-binding, nucleus; 1.79A {Homo sapiens} PDB: 2jv0_A* Length = 149 | Back alignment and structure |
|---|
| >3ihx_A PR domain zinc finger protein 10; PRDM10, methyltransferase, structural genomics, structural G consortium, SGC, DNA-binding, metal-binding, nucleus; 2.50A {Homo sapiens} Length = 152 | Back alignment and structure |
|---|
| >3db5_A PR domain zinc finger protein 4; methyltransferase, PRDM4, structural genomics, structural GE consortium, SGC, DNA-binding, metal-binding, nucleus; 2.15A {Homo sapiens} Length = 151 | Back alignment and structure |
|---|
| >3ep0_A PR domain zinc finger protein 12; PR domain-containing protein 12, structural genomics, structural genomics consortium, SGC, DNA-binding; 2.10A {Homo sapiens} Length = 170 | Back alignment and structure |
|---|
| >1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant photosynthetic reaction center, peripheral antenna; HET: CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1 Length = 154 | Back alignment and structure |
|---|
| >3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 3ije_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B* Length = 690 | Back alignment and structure |
|---|
| >3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 3ije_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B* Length = 690 | Back alignment and structure |
|---|
| >3g5c_A ADAM 22; alpha/beta fold, cross-linked domain, cell adhesion, cleavag of basic residues, EGF-like domain, glycoprotein, membrane, phosphoprotein; HET: NAG; 2.36A {Homo sapiens} Length = 510 | Back alignment and structure |
|---|
| >1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A Length = 699 | Back alignment and structure |
|---|
| >3ray_A PR domain-containing protein 11; structural genomics consortium, SGC, histone methylation, Zn transcriptional regulation, chromatin, transcription; 1.73A {Homo sapiens} Length = 237 | Back alignment and structure |
|---|
| >1en2_A UDA, agglutinin isolectin I/agglutinin isolectin V/ AG isolectin VI; hevein domain, superantigen, saccharide binding binding protein; HET: NAG; 1.40A {Urtica dioica} SCOP: g.3.1.1 g.3.1.1 PDB: 1eis_A* 1enm_A* 1ehd_A 1ehh_A* 1iqb_A Length = 89 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 840 | |||
| 3ooi_A | 232 | Histone-lysine N-methyltransferase, H3 lysine-36 l | 100.0 | |
| 3bo5_A | 290 | Histone-lysine N-methyltransferase setmar; SET dom | 100.0 | |
| 3ope_A | 222 | Probable histone-lysine N-methyltransferase ASH1L; | 100.0 | |
| 3h6l_A | 278 | Histone-lysine N-methyltransferase SETD2; SET doma | 100.0 | |
| 1mvh_A | 299 | Cryptic LOCI regulator 4; lysine methyltransferase | 100.0 | |
| 3hna_A | 287 | Histone-lysine N-methyltransferase, H3 lysine-9 sp | 100.0 | |
| 1ml9_A | 302 | Histone H3 methyltransferase DIM-5; adoMet-depende | 100.0 | |
| 2r3a_A | 300 | Histone-lysine N-methyltransferase SUV39H2; histon | 100.0 | |
| 2w5y_A | 192 | Histone-lysine N-methyltransferase HRX; transcript | 100.0 | |
| 3f9x_A | 166 | Histone-lysine N-methyltransferase SETD8; methyltr | 99.97 | |
| 2f69_A | 261 | Histone-lysine N-methyltransferase, H3 lysine-4 sp | 99.95 | |
| 1h3i_A | 293 | Histone H3 lysine 4 specific methyltransferase; 2. | 99.93 | |
| 1n3j_A | 119 | A612L, histone H3 lysine methyltransferase; beta b | 99.92 | |
| 2qpw_A | 149 | PR domain zinc finger protein 2; methyltransferase | 99.92 | |
| 3s8p_A | 273 | Histone-lysine N-methyltransferase SUV420H1; SET d | 99.87 | |
| 3rq4_A | 247 | Histone-lysine N-methyltransferase SUV420H2; suppr | 99.81 | |
| 3ep0_A | 170 | PR domain zinc finger protein 12; PR domain-contai | 99.78 | |
| 3db5_A | 151 | PR domain zinc finger protein 4; methyltransferase | 99.75 | |
| 3dal_A | 196 | PR domain zinc finger protein 1; methyltransferase | 99.74 | |
| 3ray_A | 237 | PR domain-containing protein 11; structural genomi | 99.57 | |
| 3ihx_A | 152 | PR domain zinc finger protein 10; PRDM10, methyltr | 99.52 | |
| 3qwp_A | 429 | SET and MYND domain-containing protein 3; SMYD3,SE | 98.21 | |
| 3n71_A | 490 | Histone lysine methyltransferase SMYD1; heart deve | 98.19 | |
| 3qww_A | 433 | SET and MYND domain-containing protein 2; methyltr | 98.02 | |
| 2llk_A | 73 | Cyclin-D-binding MYB-like transcription factor 1; | 96.48 | |
| 3qxy_A | 449 | N-lysine methyltransferase SETD6; epigenetics, pro | 96.14 | |
| 2h21_A | 440 | Ribulose-1,5 bisphosphate carboxylase/oxygenase; S | 96.06 | |
| 2cqr_A | 73 | RSGI RUH-043, DNAJ homolog subfamily C member 1; m | 95.72 | |
| 2lr8_A | 70 | CAsp8-associated protein 2; structural genomics, n | 93.99 | |
| 3smt_A | 497 | Histone-lysine N-methyltransferase SETD3; histone | 94.75 | |
| 2cu7_A | 72 | KIAA1915 protein; nuclear protein, SANT domain, DN | 94.45 | |
| 2yqk_A | 63 | Arginine-glutamic acid dipeptide repeats protein; | 94.45 | |
| 2yum_A | 75 | ZZZ3 protein, zinc finger ZZ-type-containing prote | 94.17 | |
| 2crg_A | 70 | Metastasis associated protein MTA3; transcription | 94.15 | |
| 2eqr_A | 61 | N-COR1, N-COR, nuclear receptor corepressor 1; SAN | 94.14 | |
| 2din_A | 66 | Cell division cycle 5-like protein; MYB_DNA-bindin | 94.11 | |
| 1x41_A | 60 | Transcriptional adaptor 2-like, isoform B; transcr | 93.79 | |
| 3sjm_A | 64 | Telomeric repeat-binding factor 2; human telomeric | 93.61 | |
| 2d9a_A | 60 | B-MYB, MYB-related protein B; DNA binding, structu | 93.42 | |
| 1guu_A | 52 | C-MYB, MYB proto-oncogene protein; transcription, | 93.37 | |
| 2elk_A | 58 | SPCC24B10.08C protein; hypothetical protein, struc | 93.27 | |
| 2cjj_A | 93 | Radialis; plant development, DNA-binding protein, | 92.6 | |
| 2cqq_A | 72 | RSGI RUH-037, DNAJ homolog subfamily C member 1; m | 92.53 | |
| 1ug2_A | 95 | 2610100B20RIK gene product; hypothetical protein, | 91.88 | |
| 1w0t_A | 53 | Telomeric repeat binding factor 1; telomere, DNA-b | 91.51 | |
| 3osg_A | 126 | MYB21; transcription-DNA complex, MYB2, R2R3 domai | 91.3 | |
| 2k9n_A | 107 | MYB24; R2R3 domain, DNA-binding, nucleus, DNA bind | 91.27 | |
| 1gvd_A | 52 | MYB proto-oncogene protein; transcription, transcr | 90.92 | |
| 1gv2_A | 105 | C-MYB, MYB proto-oncogene protein; transcription, | 90.71 | |
| 2iw5_B | 235 | Protein corest, REST corepressor 1; oxidoreductase | 90.44 | |
| 2yus_A | 79 | SWI/SNF-related matrix-associated actin- dependent | 89.46 | |
| 4a69_C | 94 | Nuclear receptor corepressor 2; transcription, hyd | 89.22 | |
| 2dim_A | 70 | Cell division cycle 5-like protein; MYB_DNA-bindin | 88.03 | |
| 1ity_A | 69 | TRF1; helix-turn-helix, telomeres, DNA binding, MY | 87.89 | |
| 1h8a_C | 128 | AMV V-MYB, MYB transforming protein; transcription | 87.66 | |
| 2ltp_A | 89 | Nuclear receptor corepressor 2; SMRT, TRAC, SGC, s | 87.39 | |
| 3h6l_A | 278 | Histone-lysine N-methyltransferase SETD2; SET doma | 86.5 | |
| 2yus_A | 79 | SWI/SNF-related matrix-associated actin- dependent | 86.07 | |
| 1x41_A | 60 | Transcriptional adaptor 2-like, isoform B; transcr | 85.62 | |
| 2cu7_A | 72 | KIAA1915 protein; nuclear protein, SANT domain, DN | 85.59 | |
| 2k9n_A | 107 | MYB24; R2R3 domain, DNA-binding, nucleus, DNA bind | 85.39 | |
| 3zqc_A | 131 | MYB3; transcription-DNA complex, DNA-binding prote | 84.79 | |
| 1gv2_A | 105 | C-MYB, MYB proto-oncogene protein; transcription, | 84.46 | |
| 2yum_A | 75 | ZZZ3 protein, zinc finger ZZ-type-containing prote | 83.3 | |
| 2elk_A | 58 | SPCC24B10.08C protein; hypothetical protein, struc | 82.93 | |
| 1h89_C | 159 | C-MYB, MYB proto-oncogene protein; transcription/D | 82.15 | |
| 1h8a_C | 128 | AMV V-MYB, MYB transforming protein; transcription | 81.55 | |
| 3osg_A | 126 | MYB21; transcription-DNA complex, MYB2, R2R3 domai | 81.42 | |
| 1guu_A | 52 | C-MYB, MYB proto-oncogene protein; transcription, | 80.93 |
| >3ooi_A Histone-lysine N-methyltransferase, H3 lysine-36 lysine-20 specific; SET domain, S-adenosyl-L methionine; HET: SAM; 1.75A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-41 Score=351.17 Aligned_cols=174 Identities=32% Similarity=0.566 Sum_probs=156.4
Q ss_pred ccCCCCCCcccccccCCcccCCCCccCCCccccccccccCCCCCCCCccCCCCCCCCCCCCCCCCCCCchHhhhcccccE
Q 003198 614 CEKYCGCSKSCKNRFRGCHCAKSQCRSRQCPCFAAGRECDPDVCRNCWVSCGDGSLGEPPKRGDGQCGNMRLLLRQQQRI 693 (840)
Q Consensus 614 Ce~~CgC~~~C~nRf~GC~C~~~~C~t~~CpC~~a~rECdPd~C~~C~~~Cg~~~l~~p~~~~~~~C~N~~lq~g~~~~v 693 (840)
++..|+|+.+|.||.. ..||+|..|. |+ ..|+|+.+|++...+|
T Consensus 51 ~~~~C~~~~~C~nr~~-------------------~~EC~~~~C~-c~----------------~~C~Nr~~q~~~~~~l 94 (232)
T 3ooi_A 51 DENPCGIDSECINRML-------------------LYECHPTVCP-AG----------------GRCQNQCFSKRQYPEV 94 (232)
T ss_dssp SSSTTCTTSCCHHHHT-------------------TBCCCTTTCT-TG----------------GGCCCCHHHHTCCCCE
T ss_pred CCCCCCCCCCCcCcCc-------------------eeEeCCCCCC-CC----------------CCcCCccccCCCCccE
Confidence 3567999999999975 5788887665 32 3899999999999999
Q ss_pred EEEecCCCCceEEeccccCCCCeEEeccccccCHHHHHHHhhhhccc--CccccccCCCcEEEeccccCCccccccCCCC
Q 003198 694 LLAKSDVAGWGAFLKNSVSKNDYLGEYTGELISHREADKRGKIYDRA--NSSFLFDLNDQYVLDAYRKGDKLKFANHSSN 771 (840)
Q Consensus 694 ~V~kS~~kG~GLfA~edI~kGefI~EY~GEIIs~~Ea~rR~k~yd~~--~~sYlf~L~~~~~IDA~~~GN~aRFINHSC~ 771 (840)
+|++++.+||||||+++|++|+||+||+||||+..++++|...+... ...|+|.++.+++|||+.+||++|||||||+
T Consensus 95 ev~~t~~kG~Gl~A~~~I~~G~~I~ey~Gevi~~~e~~~r~~~~~~~~~~~~y~~~l~~~~~IDa~~~Gn~aRfiNHSC~ 174 (232)
T 3ooi_A 95 EIFRTLQRGWGLRTKTDIKKGEFVNEYVGELIDEEECRARIRYAQEHDITNFYMLTLDKDRIIDAGPKGNYARFMNHCCQ 174 (232)
T ss_dssp EEEECSSSSEEEEESSCBCTTCEEEECCEEEECHHHHHHHHHHHHHTTCCCCCEEEEETTEEEEEEEEECGGGGCEECSS
T ss_pred EEEEcCCceeEEEECceecCCceeeEeeeeccCHHHHHHHHHHHhhcCCCceeeeecCcceEEeccccccccccccccCC
Confidence 99999999999999999999999999999999999999997766543 3578899999999999999999999999999
Q ss_pred CCcceeEEEEcCeeEEEEEEccCCCCCCeEEEecCCCC---CCCccccCCCCCCC
Q 003198 772 PNCFAKVMLVAGDHRVGIFAKEHIEASEELFYDYRYGP---DQAPAWARKPEGSK 823 (840)
Q Consensus 772 PNc~~~~v~V~g~~rI~ifA~RdI~aGEELTfDYgy~~---d~~pcwc~~pe~~~ 823 (840)
|||.++.|.+++.++|+|||+|||++||||||||++.. ...+|+|+.++|++
T Consensus 175 PN~~~~~~~~~~~~~i~~~A~RdI~~GEELT~dY~~~~~~~~~~~C~CGs~~CrG 229 (232)
T 3ooi_A 175 PNCETQKWSVNGDTRVGLFALSDIKAGTELTFNYNLECLGNGKTVCKCGAPNCSG 229 (232)
T ss_dssp CSEEEEEEEETTEEEEEEEESSCBCTTCBCEECCTTCSTTCTTCBCCCCCTTCCS
T ss_pred CCeEEEEEEECCceEEEEEECCccCCCCEEEEECCCCcCCCCCcEeECCCCcCcC
Confidence 99999999999999999999999999999999998654 45899999999875
|
| >3bo5_A Histone-lysine N-methyltransferase setmar; SET domain, chromati regulator, DNA damage, DNA repair, DNA-binding, nucleus, ST genomics; HET: SAH; 1.59A {Homo sapiens} | Back alignment and structure |
|---|
| >3ope_A Probable histone-lysine N-methyltransferase ASH1L; SET, nucleus; HET: SAM; 2.90A {Homo sapiens} | Back alignment and structure |
|---|
| >1mvh_A Cryptic LOCI regulator 4; lysine methyltransferase, CLR4, SET-domain; 2.30A {Schizosaccharomyces pombe} SCOP: b.85.7.1 PDB: 1mvx_A | Back alignment and structure |
|---|
| >3hna_A Histone-lysine N-methyltransferase, H3 lysine-9 specific 5; EHMT1, structural genomics, SGC, structural genomics consortium, alternative splicing, ANK repeat; HET: MLZ SAH; 1.50A {Homo sapiens} PDB: 2rfi_A* 2igq_A* 3mo0_A* 3mo2_A* 3mo5_A* 3sw9_A* 3swc_A* 4h4h_A* 4i51_A* 3fpd_A* 3k5k_A* 3nni_A* 3rjw_A* 2o8j_A* | Back alignment and structure |
|---|
| >1ml9_A Histone H3 methyltransferase DIM-5; adoMet-dependent methyltransferase histone H3 lysine- 9 methylation; 1.98A {Neurospora crassa} SCOP: b.85.7.1 PDB: 1peg_A* | Back alignment and structure |
|---|
| >2r3a_A Histone-lysine N-methyltransferase SUV39H2; histone H3-K9 methyltransferase 2, H3 lysine-9 specific 2, alternative splicing, cell cycle; HET: SAM; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
| >2w5y_A Histone-lysine N-methyltransferase HRX; transcription regulation, chromosomal rearrangement, protein lysine methyltransferase, proto-oncogene; HET: SAH; 2.00A {Homo sapiens} PDB: 2w5z_A* | Back alignment and structure |
|---|
| >3f9x_A Histone-lysine N-methyltransferase SETD8; methyltransferase, SET, lysine, alternative splicing, cell cycle, cell division, chromatin regulator, chromosomal protein, coiled coil; HET: MLY SAH; 1.25A {Homo sapiens} PDB: 3f9w_A* 3f9y_A* 3f9z_A* 1zkk_A* 4ij8_A* 2bqz_A* | Back alignment and structure |
|---|
| >2f69_A Histone-lysine N-methyltransferase, H3 lysine-4 specific SET7; SET domain, protein lysine methyltransferase, enzyme- peptide-adohcy complex; HET: MLZ SAH; 1.30A {Homo sapiens} SCOP: b.76.2.1 b.85.7.1 PDB: 3m53_A* 3m55_A* 3m54_A* 3m56_A* 3m58_A* 3m57_A* 3m59_A* 3m5a_A* 1xqh_A* 4e47_A* 1n6a_A* 1o9s_A* 3cbp_A* 3cbm_A* 3cbo_A* 3os5_A* | Back alignment and structure |
|---|
| >1h3i_A Histone H3 lysine 4 specific methyltransferase; 2.1A {Homo sapiens} SCOP: b.76.2.1 b.85.7.1 PDB: 1mt6_A* 1n6c_A* 1muf_A | Back alignment and structure |
|---|
| >1n3j_A A612L, histone H3 lysine methyltransferase; beta barrel, homodimer; NMR {Paramecium bursaria chlorella virus 1} SCOP: b.85.7.2 PDB: 2g46_A* 3kma_A 3kmj_A 3kmt_A* | Back alignment and structure |
|---|
| >2qpw_A PR domain zinc finger protein 2; methyltransferase, activator, alternative initiation, alternative splicing, DNA-binding, metal-binding, nucleus; 1.79A {Homo sapiens} PDB: 2jv0_A* | Back alignment and structure |
|---|
| >3s8p_A Histone-lysine N-methyltransferase SUV420H1; SET domain, histone methyltransferase, transcription regulat histone lysine, SAM, methylation, nucleus; HET: MSE SAM; 1.85A {Homo sapiens} | Back alignment and structure |
|---|
| >3rq4_A Histone-lysine N-methyltransferase SUV420H2; suppressor, variegation 4-20 homolog 2, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
| >3ep0_A PR domain zinc finger protein 12; PR domain-containing protein 12, structural genomics, structural genomics consortium, SGC, DNA-binding; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
| >3db5_A PR domain zinc finger protein 4; methyltransferase, PRDM4, structural genomics, structural GE consortium, SGC, DNA-binding, metal-binding, nucleus; 2.15A {Homo sapiens} | Back alignment and structure |
|---|
| >3dal_A PR domain zinc finger protein 1; methyltransferase, PRDM1, structural genomics, structural genomics consortium, SGC, DNA-binding, metal-binding; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
| >3ray_A PR domain-containing protein 11; structural genomics consortium, SGC, histone methylation, Zn transcriptional regulation, chromatin, transcription; 1.73A {Homo sapiens} | Back alignment and structure |
|---|
| >3ihx_A PR domain zinc finger protein 10; PRDM10, methyltransferase, structural genomics, structural G consortium, SGC, DNA-binding, metal-binding, nucleus; 2.50A {Homo sapiens} | Back alignment and structure |
|---|
| >3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A* | Back alignment and structure |
|---|
| >3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus} | Back alignment and structure |
|---|
| >3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A* | Back alignment and structure |
|---|
| >2llk_A Cyclin-D-binding MYB-like transcription factor 1; helix bundle, SGC, structural genomics consortium, NESG, NOR structural genomics consortium; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >3qxy_A N-lysine methyltransferase SETD6; epigenetics, protein lysine methyltransferase, transferase, network VIA methyllysine signaling; HET: SAM; 2.09A {Homo sapiens} PDB: 3rc0_A* | Back alignment and structure |
|---|
| >2h21_A Ribulose-1,5 bisphosphate carboxylase/oxygenase; SET domain, protein lysine methyltransferase, transferase; HET: SAM; 2.45A {Pisum sativum} SCOP: a.166.1.1 b.85.7.3 PDB: 2h23_A* 2h2e_A* 2h2j_A* 1p0y_A* 1ozv_A* 1mlv_A* | Back alignment and structure |
|---|
| >2cqr_A RSGI RUH-043, DNAJ homolog subfamily C member 1; membrane protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.4.1.3 | Back alignment and structure |
|---|
| >2lr8_A CAsp8-associated protein 2; structural genomics, northeast structural genomics consortiu PSI-biology, apoptosis; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >3smt_A Histone-lysine N-methyltransferase SETD3; histone methyltransferase, histone modification, LYSI translational modification, structural genomics; HET: SAM; 2.04A {Homo sapiens} | Back alignment and structure |
|---|
| >2cu7_A KIAA1915 protein; nuclear protein, SANT domain, DNA binding, regulation of transcription, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.4.1.3 | Back alignment and structure |
|---|
| >2yqk_A Arginine-glutamic acid dipeptide repeats protein; structure genomics, SANT domain, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >2yum_A ZZZ3 protein, zinc finger ZZ-type-containing protein 3; transcription, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >2crg_A Metastasis associated protein MTA3; transcription factor, helix turn helix, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.4.1.3 | Back alignment and structure |
|---|
| >2eqr_A N-COR1, N-COR, nuclear receptor corepressor 1; SANT domain, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >2din_A Cell division cycle 5-like protein; MYB_DNA-binding domain, cell cycle, DNA binding, spliceosome, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >1x41_A Transcriptional adaptor 2-like, isoform B; transcriptional adaptor protein2, transcriptional activation, MYB domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.4.1.1 | Back alignment and structure |
|---|
| >3sjm_A Telomeric repeat-binding factor 2; human telomeric repeat binding protein 2, telomere, telomeri homeodomain proteins amino acid sequence; HET: DNA; 1.35A {Homo sapiens} PDB: 1xg1_A 1vfc_A 1vf9_A 1w0u_A | Back alignment and structure |
|---|
| >2d9a_A B-MYB, MYB-related protein B; DNA binding, structural genomics, unknown function, NPPSFA; NMR {Mus musculus} | Back alignment and structure |
|---|
| >1guu_A C-MYB, MYB proto-oncogene protein; transcription, transcription regulation, DNA binding, ION bindi proto-oncogene, nuclear protein, activator; 1.6A {Mus musculus} SCOP: a.4.1.3 PDB: 1mbe_A 1mbf_A | Back alignment and structure |
|---|
| >2elk_A SPCC24B10.08C protein; hypothetical protein, structural genomics, NPPSFA; NMR {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
| >2cjj_A Radialis; plant development, DNA-binding protein, MYB transcription FA DNA-binding, nuclear protein, floral asymmetry; 1.9A {Antirrhinum majus} SCOP: a.4.1.3 | Back alignment and structure |
|---|
| >2cqq_A RSGI RUH-037, DNAJ homolog subfamily C member 1; membrane protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.4.1.3 | Back alignment and structure |
|---|
| >1ug2_A 2610100B20RIK gene product; hypothetical protein, MYB-like DNA binding domain, structural genomics, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: a.4.1.3 | Back alignment and structure |
|---|
| >1w0t_A Telomeric repeat binding factor 1; telomere, DNA-binding protein, homeodomain, mitosis, cell cycle; 2.00A {Homo sapiens} SCOP: a.4.1.4 PDB: 1ba5_A | Back alignment and structure |
|---|
| >3osg_A MYB21; transcription-DNA complex, MYB2, R2R3 domain, DNA binding PR transcription factor; 2.00A {Trichomonas vaginalis} PDB: 3osf_A | Back alignment and structure |
|---|
| >2k9n_A MYB24; R2R3 domain, DNA-binding, nucleus, DNA binding protein; NMR {Trichomonas vaginalis} PDB: 2kdz_A | Back alignment and structure |
|---|
| >1gvd_A MYB proto-oncogene protein; transcription, transcription regulation, C-MYB, DNA binding, ION binding, nuclear protein; 1.45A {Mus musculus} SCOP: a.4.1.3 PDB: 1gv5_A 1mbg_A 1mbh_A | Back alignment and structure |
|---|
| >1gv2_A C-MYB, MYB proto-oncogene protein; transcription, DNA binding, ION binding; 1.68A {Mus musculus} SCOP: a.4.1.3 a.4.1.3 PDB: 1mse_C* 1msf_C* 1a5j_A 1idy_A 1idz_A 1mbj_A 1mbk_A | Back alignment and structure |
|---|
| >2iw5_B Protein corest, REST corepressor 1; oxidoreductase-transcription regulator complex, oxidoreductase/repressor complex, histone demethylase, FAD; HET: FAD; 2.57A {Homo sapiens} SCOP: a.4.1.3 PDB: 2uxn_B* 2uxx_B* 2y48_B* 2v1d_B* 2x0l_B* | Back alignment and structure |
|---|
| >2yus_A SWI/SNF-related matrix-associated actin- dependent regulator of chromatin subfamily...; SWI/SNF complex 155 kDa subunit, BRG1-associated factor 155; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >4a69_C Nuclear receptor corepressor 2; transcription, hydrolase; HET: I0P; 2.06A {Homo sapiens} PDB: 1xc5_A | Back alignment and structure |
|---|
| >2dim_A Cell division cycle 5-like protein; MYB_DNA-binding domain, cell cycle, DNA binding, spliceosome, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >1ity_A TRF1; helix-turn-helix, telomeres, DNA binding, MYB domain, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: a.4.1.4 PDB: 1iv6_A | Back alignment and structure |
|---|
| >1h8a_C AMV V-MYB, MYB transforming protein; transcription/DNA; 2.23A {Avian myeloblastosis virus} SCOP: a.4.1.3 a.4.1.3 | Back alignment and structure |
|---|
| >2ltp_A Nuclear receptor corepressor 2; SMRT, TRAC, SGC, structural genomics consortium, NESG, north structural genomics consortium; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >2yus_A SWI/SNF-related matrix-associated actin- dependent regulator of chromatin subfamily...; SWI/SNF complex 155 kDa subunit, BRG1-associated factor 155; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >1x41_A Transcriptional adaptor 2-like, isoform B; transcriptional adaptor protein2, transcriptional activation, MYB domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.4.1.1 | Back alignment and structure |
|---|
| >2cu7_A KIAA1915 protein; nuclear protein, SANT domain, DNA binding, regulation of transcription, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.4.1.3 | Back alignment and structure |
|---|
| >2k9n_A MYB24; R2R3 domain, DNA-binding, nucleus, DNA binding protein; NMR {Trichomonas vaginalis} PDB: 2kdz_A | Back alignment and structure |
|---|
| >3zqc_A MYB3; transcription-DNA complex, DNA-binding protein, nucleus; 2.90A {Trichomonas vaginalis} | Back alignment and structure |
|---|
| >1gv2_A C-MYB, MYB proto-oncogene protein; transcription, DNA binding, ION binding; 1.68A {Mus musculus} SCOP: a.4.1.3 a.4.1.3 PDB: 1mse_C* 1msf_C* 1a5j_A 1idy_A 1idz_A 1mbj_A 1mbk_A | Back alignment and structure |
|---|
| >2yum_A ZZZ3 protein, zinc finger ZZ-type-containing protein 3; transcription, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >2elk_A SPCC24B10.08C protein; hypothetical protein, structural genomics, NPPSFA; NMR {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
| >1h89_C C-MYB, MYB proto-oncogene protein; transcription/DNA; 2.45A {Mus musculus} SCOP: a.4.1.3 a.4.1.3 a.4.1.3 PDB: 1h88_C | Back alignment and structure |
|---|
| >1h8a_C AMV V-MYB, MYB transforming protein; transcription/DNA; 2.23A {Avian myeloblastosis virus} SCOP: a.4.1.3 a.4.1.3 | Back alignment and structure |
|---|
| >3osg_A MYB21; transcription-DNA complex, MYB2, R2R3 domain, DNA binding PR transcription factor; 2.00A {Trichomonas vaginalis} PDB: 3osf_A | Back alignment and structure |
|---|
| >1guu_A C-MYB, MYB proto-oncogene protein; transcription, transcription regulation, DNA binding, ION bindi proto-oncogene, nuclear protein, activator; 1.6A {Mus musculus} SCOP: a.4.1.3 PDB: 1mbe_A 1mbf_A | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 840 | ||||
| d1mvha_ | 269 | b.85.7.1 (A:) SET domain of Clr4 {Fission yeast (S | 4e-37 | |
| d1ml9a_ | 284 | b.85.7.1 (A:) Dim-5 {Fungus (Neurospora crassa) [T | 3e-33 | |
| d2f69a2 | 171 | b.85.7.1 (A:194-364) Histone H3 K4-specific methyl | 3e-27 | |
| d2g46a1 | 119 | b.85.7.2 (A:1-119) Viral histone H3 Lysine 27 Meth | 2e-13 | |
| d2h9ec1 | 78 | g.22.1.1 (C:6-83) Anticoagulant protein {Dog hookw | 0.004 |
| >d1mvha_ b.85.7.1 (A:) SET domain of Clr4 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 269 | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-clip superfamily: SET domain family: Histone lysine methyltransferases domain: SET domain of Clr4 species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Score = 138 bits (348), Expect = 4e-37
Identities = 56/219 (25%), Positives = 82/219 (37%), Gaps = 24/219 (10%)
Query: 606 PCLHNGTCCEKYCGCSKSCKNRFRGCHCAKSQCRSRQCPCFAAGR--ECDPDVCRNCWVS 663
P +G C GC + +R C C A GR V C
Sbjct: 62 PNFQSGCNCSSLGGCDLNNPSR---CECLDDLDEPTHFAYDAQGRVRADTGAVIYECNSF 118
Query: 664 CGDGSLGEPPKRGDGQCGNMRLLLRQQQRILLAKSDVAGWGAFLKNSVSKNDYLGEYTGE 723
C +C N + + + + K+ GWG ++ Y GE
Sbjct: 119 CSCSM----------ECPNRVVQRGRTLPLEIFKTKEKGWGVRSLRFAPAGTFITCYLGE 168
Query: 724 LISHREADKRGKIYDRANSSFLFDL-----NDQYVLDAYRKGDKLKFANHSSNPNCFAKV 778
+I+ EA KR K YD ++LFDL +Y +DA GD +F NHS +PN
Sbjct: 169 VITSAEAAKRDKNYDDDGITYLFDLDMFDDASEYTVDAQNYGDVSRFFNHSCSPNIAIYS 228
Query: 779 MLVAGD----HRVGIFAKEHIEASEELFYDYRYGPDQAP 813
+ + + FA + I+ EEL +DY D +P
Sbjct: 229 AVRNHGFRTIYDLAFFAIKDIQPLEELTFDYAGAKDFSP 267
|
| >d1ml9a_ b.85.7.1 (A:) Dim-5 {Fungus (Neurospora crassa) [TaxId: 5141]} Length = 284 | Back information, alignment and structure |
|---|
| >d2f69a2 b.85.7.1 (A:194-364) Histone H3 K4-specific methyltransferase SET7/9 catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Length = 171 | Back information, alignment and structure |
|---|
| >d2g46a1 b.85.7.2 (A:1-119) Viral histone H3 Lysine 27 Methyltransferase {Paramecium bursaria chlorella virus 1, PBCV-1 [TaxId: 10506]} Length = 119 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 840 | |||
| d1mvha_ | 269 | SET domain of Clr4 {Fission yeast (Schizosaccharom | 100.0 | |
| d1ml9a_ | 284 | Dim-5 {Fungus (Neurospora crassa) [TaxId: 5141]} | 100.0 | |
| d2f69a2 | 171 | Histone H3 K4-specific methyltransferase SET7/9 ca | 99.92 | |
| d2g46a1 | 119 | Viral histone H3 Lysine 27 Methyltransferase {Para | 99.86 | |
| d2h2ja2 | 261 | RuBisCo LSMT catalytic domain {Garden pea (Pisum s | 97.98 | |
| d1ug2a_ | 95 | 2610100b20rik gene product {Mouse (Mus musculus) [ | 96.22 | |
| d2cqra1 | 60 | DnaJ homolog subfamily C member 1 {Human (Homo sap | 95.72 | |
| d2crga1 | 57 | Metastasis associated protein MTA3 {Mouse (Mus mus | 95.69 | |
| d1guua_ | 50 | c-Myb, DNA-binding domain {Mouse (Mus musculus) [T | 95.63 | |
| d1gv2a2 | 47 | c-Myb, DNA-binding domain {Mouse (Mus musculus) [T | 95.1 | |
| d1w0ua_ | 55 | Telomeric repeat binding factor 2, TRF2 {Human (Ho | 94.86 | |
| d2iw5b1 | 65 | REST corepressor 1, CoREST {Human (Homo sapiens) [ | 94.31 | |
| d2cjja1 | 63 | Radialis {Garden snapdragon (Antirrhinum majus) [T | 93.8 | |
| d2cu7a1 | 65 | MYSM1 (KIAA1915) {Human (Homo sapiens) [TaxId: 960 | 93.32 | |
| d1w0ta_ | 52 | DNA-binding domain of human telomeric protein, hTR | 92.17 | |
| d1gvda_ | 52 | c-Myb, DNA-binding domain {Mouse (Mus musculus) [T | 92.08 | |
| d1xc5a1 | 68 | Nuclear receptor corepressor 2 {Human (Homo sapien | 91.63 | |
| d1x41a1 | 47 | Transcriptional adaptor 2-like, TADA2L, isoform b | 91.44 | |
| d2cu7a1 | 65 | MYSM1 (KIAA1915) {Human (Homo sapiens) [TaxId: 960 | 90.91 | |
| d1x41a1 | 47 | Transcriptional adaptor 2-like, TADA2L, isoform b | 89.33 | |
| d2cqqa1 | 59 | DnaJ homolog subfamily C member 1 {Human (Homo sap | 88.47 | |
| d2iw5b1 | 65 | REST corepressor 1, CoREST {Human (Homo sapiens) [ | 88.43 | |
| d1igna1 | 86 | DNA-binding domain of rap1 {Baker's yeast (Sacchar | 88.34 | |
| d1xc5a1 | 68 | Nuclear receptor corepressor 2 {Human (Homo sapien | 82.2 | |
| d1ofcx2 | 128 | SLIDE domain of the nucleosome remodeling ATPase I | 80.32 | |
| d1gvda_ | 52 | c-Myb, DNA-binding domain {Mouse (Mus musculus) [T | 80.24 |
| >d1mvha_ b.85.7.1 (A:) SET domain of Clr4 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-clip superfamily: SET domain family: Histone lysine methyltransferases domain: SET domain of Clr4 species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Probab=100.00 E-value=2.4e-39 Score=340.31 Aligned_cols=137 Identities=31% Similarity=0.480 Sum_probs=128.8
Q ss_pred CCCCchHhhhcccccEEEEecCCCCceEEeccccCCCCeEEeccccccCHHHHHHHhhhhcccCccccccCC-----CcE
Q 003198 678 GQCGNMRLLLRQQQRILLAKSDVAGWGAFLKNSVSKNDYLGEYTGELISHREADKRGKIYDRANSSFLFDLN-----DQY 752 (840)
Q Consensus 678 ~~C~N~~lq~g~~~~v~V~kS~~kG~GLfA~edI~kGefI~EY~GEIIs~~Ea~rR~k~yd~~~~sYlf~L~-----~~~ 752 (840)
..|.|+.+|++.+.+|+|++|+.+||||||+++|++|+||+||+||||+..++++|...|+....+|+|.+. ..+
T Consensus 123 ~~C~Nr~~q~g~~~~leV~~t~~~G~GvfA~~~I~kGt~I~eY~Gevi~~~e~~~R~~~y~~~~~~~~~~l~~~~~~~~~ 202 (269)
T d1mvha_ 123 MECPNRVVQRGRTLPLEIFKTKEKGWGVRSLRFAPAGTFITCYLGEVITSAEAAKRDKNYDDDGITYLFDLDMFDDASEY 202 (269)
T ss_dssp TTCTTCTGGGCCCSCEEEEECSSSSEEEEESSCBCTTCEEEECCCEEEEHHHHHHHHTTCCSCSCCCEEEECSSCSSSCE
T ss_pred CCCCCeecCCCCccCEEEEEcCCCCeEEEeCcccCCCceEEEecceEEcHHHHHHHHHhHhhcCCcchhheecccccccc
Confidence 479999999999999999999999999999999999999999999999999999999999998888998764 469
Q ss_pred EEeccccCCccccccCCCCCCcceeEEEEcCe----eEEEEEEccCCCCCCeEEEecCCCCCCCcc
Q 003198 753 VLDAYRKGDKLKFANHSSNPNCFAKVMLVAGD----HRVGIFAKEHIEASEELFYDYRYGPDQAPA 814 (840)
Q Consensus 753 ~IDA~~~GN~aRFINHSC~PNc~~~~v~V~g~----~rI~ifA~RdI~aGEELTfDYgy~~d~~pc 814 (840)
+|||+..||++|||||||+|||.++.|++++. ++|+|||+|||++||||||||||..+.+|.
T Consensus 203 ~iDa~~~GN~aRFiNHSC~PN~~~~~v~~~~~~~~~~~i~~fA~rdI~~GEELt~DYG~~~d~~P~ 268 (269)
T d1mvha_ 203 TVDAQNYGDVSRFFNHSCSPNIAIYSAVRNHGFRTIYDLAFFAIKDIQPLEELTFDYAGAKDFSPV 268 (269)
T ss_dssp EEECSSEECGGGGCEECSSCSEEEEEEESCTTCTTSCEEEEEESSCBCTTCBCEECCCTTSSSSCC
T ss_pred eeeeeecCcceEEeecCCCCCcEEEEEEecCCcCccceEEEEECCccCCCCEEEEecCCCcCCCCC
Confidence 99999999999999999999999999998754 689999999999999999999999888774
|
| >d1ml9a_ b.85.7.1 (A:) Dim-5 {Fungus (Neurospora crassa) [TaxId: 5141]} | Back information, alignment and structure |
|---|
| >d2f69a2 b.85.7.1 (A:194-364) Histone H3 K4-specific methyltransferase SET7/9 catalytic domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2g46a1 b.85.7.2 (A:1-119) Viral histone H3 Lysine 27 Methyltransferase {Paramecium bursaria chlorella virus 1, PBCV-1 [TaxId: 10506]} | Back information, alignment and structure |
|---|
| >d2h2ja2 b.85.7.3 (A:50-310) RuBisCo LSMT catalytic domain {Garden pea (Pisum sativum) [TaxId: 3888]} | Back information, alignment and structure |
|---|
| >d1ug2a_ a.4.1.3 (A:) 2610100b20rik gene product {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d2cqra1 a.4.1.3 (A:7-66) DnaJ homolog subfamily C member 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2crga1 a.4.1.3 (A:8-64) Metastasis associated protein MTA3 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
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| >d1guua_ a.4.1.3 (A:) c-Myb, DNA-binding domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
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| >d1gv2a2 a.4.1.3 (A:144-190) c-Myb, DNA-binding domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
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| >d1w0ua_ a.4.1.4 (A:) Telomeric repeat binding factor 2, TRF2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d2iw5b1 a.4.1.3 (B:376-440) REST corepressor 1, CoREST {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d2cjja1 a.4.1.3 (A:8-70) Radialis {Garden snapdragon (Antirrhinum majus) [TaxId: 4151]} | Back information, alignment and structure |
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| >d2cu7a1 a.4.1.3 (A:8-72) MYSM1 (KIAA1915) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1w0ta_ a.4.1.4 (A:) DNA-binding domain of human telomeric protein, hTRF1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1gvda_ a.4.1.3 (A:) c-Myb, DNA-binding domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
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| >d1xc5a1 a.4.1.3 (A:413-480) Nuclear receptor corepressor 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1x41a1 a.4.1.1 (A:8-54) Transcriptional adaptor 2-like, TADA2L, isoform b {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d2cu7a1 a.4.1.3 (A:8-72) MYSM1 (KIAA1915) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1x41a1 a.4.1.1 (A:8-54) Transcriptional adaptor 2-like, TADA2L, isoform b {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d2cqqa1 a.4.1.3 (A:8-66) DnaJ homolog subfamily C member 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d2iw5b1 a.4.1.3 (B:376-440) REST corepressor 1, CoREST {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1igna1 a.4.1.6 (A:360-445) DNA-binding domain of rap1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
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| >d1xc5a1 a.4.1.3 (A:413-480) Nuclear receptor corepressor 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1ofcx2 a.4.1.13 (X:851-978) SLIDE domain of the nucleosome remodeling ATPase ISWI {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
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| >d1gvda_ a.4.1.3 (A:) c-Myb, DNA-binding domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
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